CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_AP014633	Thioploca ingrica DNA, complete genome	11 crisprs	cas14j,PD-DExK,cas4,cas2,cas1,cas6,cas3,cas5,cas7,cas8b1,DEDDh,csa3,c2c9_V-U4	0	13	4	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_AP014633_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP014633_1

485689-485789

Orphan

Consensus_repeat	Method
TGGGATGAACAAAATCGCAAATGGGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP014633_1

>merge|NZ_AP014633|1|485689-485789|CRISPRCasFinder
AGAGAGGAACAAACGCGGAAGTGGGATGAACAAAATCGCAAATGGGAGGAGTATACCCAAGAGCAAAACCATAAATGGGATGAACAAAATCGCAAGTGGGA

>NZ_AP014633|1|1|485689-485789|CRISPRCasFinder
AGAGAGGAACAAACGCGGAAGTGGGA	TGAACAAAATCGCAAATGGGAGGAGTATACCCAAGAGCAAAACCATAAA
TGGGATGAACAAAATCGCAAGTGGGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP014633.1\|WP_083942421.1\|492269_492665_-\|succinate-dehydrogenase,-hydrophobic-membrane-anchor-protein	unknown	unknown	gnl\|CDD\|239575
NZ_AP014633.1\|WP_083942422.1\|497105_498014_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|99749
NZ_AP014633.1\|WP_083942420.1\|481276_483403_-\|glycosyl-hydrolase-family-57	unknown	unknown	gnl\|CDD\|367318
NZ_AP014633.1\|WP_045472295.1\|493261_493948_-\|6-phosphogluconolactonase	unknown	unknown	gnl\|CDD\|238694
NZ_AP014633.1\|WP_045472283.1\|489685_490465_-\|succinate-dehydrogenase-iron-sulfur-subunit	unknown	unknown	gnl\|CDD\|235652
NZ_AP014633.1\|WP_045472268.1\|478808_479141_+\|DUF2325-domain-containing-protein	unknown	unknown	gnl\|CDD\|226813
NZ_AP014633.1\|WP_045472297.1\|493995_494907_-\|D-hexose-6-phosphate-mutarotase	unknown	unknown	gnl\|CDD\|185697
NZ_AP014633.1\|WP_045472271.1\|479500_481207_+\|Flp-pilus-assembly-complex-ATPase-component	unknown	unknown	gnl\|CDD\|274186
NZ_AP014633.1\|WP_052491667.1\|484322_484874_+\|thermonuclease-family-protein	unknown	unknown	gnl\|CDD\|224442
NZ_AP014633.1\|WP_045472292.1\|492661_493048_-\|succinate-dehydrogenase,-cytochrome-b556-subunit	unknown	unknown	gnl\|CDD\|239579
NZ_AP014633.1\|WP_052491669.1\|498055_498700_+\|NYN-domain-containing-protein	unknown	unknown	gnl\|CDD\|375901
NZ_AP014633.1\|WP_045472266.1\|476789_478442_+\|GAF-domain-containing-protein	unknown	unknown	gnl\|CDD\|225116
NZ_AP014633.1\|WP_045472256.1\|474316_475033_+\|leucyl/phenylalanyl-tRNA--protein-transferase	unknown	unknown	gnl\|CDD\|234720
NZ_AP014633.1\|WP_045472277.1\|484987_485428_+\|DUF29-domain-containing-protein	unknown	unknown	gnl\|CDD\|366774
NZ_AP014633.1\|WP_052491668.1\|486437_489566_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|197594
NZ_AP014633.1\|WP_045472259.1\|475029_475743_+\|arginyltransferase	unknown	unknown	gnl\|CDD\|234939
NZ_AP014633.1\|WP_083942692.1\|483505_484288_-\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	unknown	unknown	gnl\|CDD\|234708
NZ_AP014633.1\|WP_045472286.1\|490477_492268_-\|succinate-dehydrogenase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|236375
NZ_AP014633.1\|WP_045472300.1\|495150_496644_-\|glucose-6-phosphate-dehydrogenase	unknown	unknown	gnl\|CDD\|235579
NZ_AP014633.1\|WP_045472262.1\|475881_476733_+\|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase-FolD	unknown	unknown	gnl\|CDD\|236760

Protein	Function_ID	Function_description	E-value
NZ_AP014633.1\|WP_083942421.1\|492269_492665_-\|succinate-dehydrogenase,-hydrophobic-membrane-anchor-protein	gnl\|CDD\|239575	cd03495, SQR_TypeC_SdhD_like, Succinate:quinone oxidoreductase (SQR) Type C subfamily, Succinate dehydrogenase D (SdhD) subunit-like; composed of predominantly uncharacterized bacterial proteins with similarity to the E. coli SdhD subunit. One characterized protein is the respiratory Complex II SdhD subunit of the only eukaryotic member, Reclinomonas americana. SQR catalyzes the oxidation of succinate to fumarate coupled to the reduction of quinone to quinol. It is also called succinate dehydrogenase or Complex II, and is part of the citric acid cycle and the aerobic respiratory chain. SQR is composed of a flavoprotein catalytic subunit, an iron-sulfur protein and one or two hydrophobic transmembrane subunits. E. coli SQR is classified as Type C SQRs because it contains two transmembrane subunits and one heme group. The SdhD and SdhC subunits are membrane anchor subunits containing heme and quinone binding sites. The two-electron oxidation of succinate in the flavoprotein active site is coupled to the two-electron reduction of quinone in the membrane anchor subunits via electron transport through FAD and three iron-sulfur centers. The reversible reduction of quinone is an essential feature of respiration, allowing transfer of electrons between respiratory complexes.	1.12361e-17
NZ_AP014633.1\|WP_083942422.1\|497105_498014_+\|hypothetical-protein	gnl\|CDD\|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	1.36544e-16
NZ_AP014633.1\|WP_083942420.1\|481276_483403_-\|glycosyl-hydrolase-family-57	gnl\|CDD\|367318	pfam03065, Glyco_hydro_57, Glycosyl hydrolase family 57. This family includes alpha-amylase (EC:3.2.1.1), 4--glucanotransferase (EC:2.4.1.-) and amylopullulanase enzymes.	1.85658e-15
NZ_AP014633.1\|WP_045472295.1\|493261_493948_-\|6-phosphogluconolactonase	gnl\|CDD\|238694	cd01400, 6PGL, 6PGL: 6-Phosphogluconolactonase (6PGL) subfamily; 6PGL catalyzes the second step of the oxidative phase of the pentose phosphate pathway, the hydrolyzation of 6-phosphoglucono-1,5-lactone (delta form) to 6-phosphogluconate. 6PGL is thought to guard against the accumulation of the delta form of the lactone, which may be toxic through its reaction with endogenous cellular nucleophiles.	1.89565e-76
NZ_AP014633.1\|WP_045472283.1\|489685_490465_-\|succinate-dehydrogenase-iron-sulfur-subunit	gnl\|CDD\|235652	PRK05950, sdhB, succinate dehydrogenase iron-sulfur subunit; Reviewed.	1.78427e-166
NZ_AP014633.1\|WP_045472268.1\|478808_479141_+\|DUF2325-domain-containing-protein	gnl\|CDD\|226813	COG4378, COG4378, Uncharacterized protein conserved in bacteria [Function unknown].	1.7104e-18
NZ_AP014633.1\|WP_045472297.1\|493995_494907_-\|D-hexose-6-phosphate-mutarotase	gnl\|CDD\|185697	cd09020, D-hex-6-P-epi_like, D-hexose-6-phosphate epimerase-like. D-Hexose-6-phosphate epimerase Ymr099c from Saccharomyces cerevisiae belongs to the large superfamily of aldose-1-epimerases. Its active site is very similar to the catalytic site of galactose mutarotase, the best studied member of the superfamily. It also contains the conserved glutamate and histidine residues that have been shown in galactose mutarotase to be critical for catalysis, the glutamate serving as the active site base to initiate the reaction by removing the proton from the C-1 hydroxyl group of the sugar substrate, and the histidine as the active site acid to protonate the C-5 ring oxygen. In addition Ymr099c contains 2 conserved arginine residues which are involved in phosphate binding, and exhibits hexose-6-phosphate mutarotase activity on glucose-6-P, galactose-6-P and mannose-6-P.	2.35626e-131
NZ_AP014633.1\|WP_045472271.1\|479500_481207_+\|Flp-pilus-assembly-complex-ATPase-component	gnl\|CDD\|274186	TIGR02538, Type_IV_pilus_assembly_protein_PilF, type IV-A pilus assembly ATPase PilB. This model describes a protein of type IV pilus biogenesis designated PilB in Pseudomonas aeruginosa but PilF in Neisseria gonorrhoeae; the more common usage, reflected here, is PilB. This protein is an ATPase involved in protein export for pilin assembly and is closely related to GspE (TIGR02533) of type II secretion, also called the main terminal branch of the general secretion pathway. Note that type IV pilus systems are often divided into type IV-A and IV-B, with the latter group including bundle-forming pilus, mannose-sensitive hemagglutinin, etc. Members of this family are found in type IV-A systems. [Cell envelope, Surface structures, Protein fate, Protein and peptide secretion and trafficking].	6.74403e-172
NZ_AP014633.1\|WP_052491667.1\|484322_484874_+\|thermonuclease-family-protein	gnl\|CDD\|224442	COG1525, COG1525, Micrococcal nuclease (thermonuclease) homologs [DNA replication, recombination, and repair].	1.582e-34
NZ_AP014633.1\|WP_045472292.1\|492661_493048_-\|succinate-dehydrogenase,-cytochrome-b556-subunit	gnl\|CDD\|239579	cd03499, SQR_TypeC_SdhC, Succinate:quinone oxidoreductase (SQR) Type C subfamily, Succinate dehydrogenase C (SdhC) subunit; composed of bacterial SdhC and eukaryotic large cytochrome b binding (CybL) proteins. SQR catalyzes the oxidation of succinate to fumarate coupled to the reduction of quinone to quinol. Members of this family reduce high potential quinones such as ubiquinone. SQR is also called succinate dehydrogenase or Complex II, and is part of the citric acid cycle and the aerobic respiratory chain. SQR is composed of a flavoprotein catalytic subunit, an iron-sulfur protein and one or two hydrophobic transmembrane subunits. Proteins in this subfamily are classified as Type C SQRs because they contain two transmembrane subunits and one heme group. The heme and quinone binding sites reside in the transmembrane subunits. The SdhC or CybL protein is one of the two transmembrane subunits of bacterial and eukaryotic SQRs. The two-electron oxidation of succinate in the flavoprotein active site is coupled to the two-electron reduction of quinone in the membrane anchor subunits via electron transport through FAD and three iron-sulfur centers. The reversible reduction of quinone is an essential feature of respiration, allowing transfer of electrons between respiratory complexes.	3.48359e-40
NZ_AP014633.1\|WP_052491669.1\|498055_498700_+\|NYN-domain-containing-protein	gnl\|CDD\|375901	pfam18475, PIN7, PIN domain. This is a bacterial PIN-like domain of unknown function.	1.8196e-21
NZ_AP014633.1\|WP_045472266.1\|476789_478442_+\|GAF-domain-containing-protein	gnl\|CDD\|225116	COG2206, COG2206, c-di-GMP phosphodiesterase class II (HD-GYP domain) [Signal transduction mechanisms].	3.04863e-34
NZ_AP014633.1\|WP_045472256.1\|474316_475033_+\|leucyl/phenylalanyl-tRNA--protein-transferase	gnl\|CDD\|234720	PRK00301, aat, leucyl/phenylalanyl-tRNA--protein transferase; Reviewed.	4.28245e-133
NZ_AP014633.1\|WP_045472277.1\|484987_485428_+\|DUF29-domain-containing-protein	gnl\|CDD\|366774	pfam01724, DUF29, Domain of unknown function DUF29. This family consists of various hypothetical proteins from cyanobacteria, none of which are functionally described. The aligned region is approximately 120-140 amino acids long corresponding to almost the entire length of the proteins in the family. Structure 3fcn is a small protein that has a novel all-alpha fold. The N-terminal helical hairpin is likely to function as a dimerization module. This protein is a member of PFam family PF01724. The function of this protein is unknown. One protein sequence contains a fusion of this protein and a DnaB domain, suggesting a possible role in DNA helicase activity (hypothetical). Dali hits have low Z and high rmsd, suggesting probably only topological similarities (not functional relevance) (details derived from TOPSAN). The family has several highly conserved sequence motifs, including YD/ExD, DxxNVxEEIE, and CPY/F/W, as well as conserved tryptophans.	1.28075e-62
NZ_AP014633.1\|WP_052491668.1\|486437_489566_+\|hypothetical-protein	gnl\|CDD\|197594	smart00237, Calx_beta, Domains in Na-Ca exchangers and integrin-beta4. Domain in Na-Ca exchangers and integrin subunit beta4 (and some cyanobacterial proteins).	1.43536e-22
NZ_AP014633.1\|WP_045472259.1\|475029_475743_+\|arginyltransferase	gnl\|CDD\|234939	PRK01305, PRK01305, arginyl-tRNA-protein transferase; Provisional.	4.91057e-121
NZ_AP014633.1\|WP_083942692.1\|483505_484288_-\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	gnl\|CDD\|234708	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA.	1.92163e-131
NZ_AP014633.1\|WP_045472286.1\|490477_492268_-\|succinate-dehydrogenase-flavoprotein-subunit	gnl\|CDD\|236375	PRK09078, sdhA, succinate dehydrogenase flavoprotein subunit; Reviewed.	0
NZ_AP014633.1\|WP_045472300.1\|495150_496644_-\|glucose-6-phosphate-dehydrogenase	gnl\|CDD\|235579	PRK05722, PRK05722, glucose-6-phosphate 1-dehydrogenase; Validated.	0
NZ_AP014633.1\|WP_045472262.1\|475881_476733_+\|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase-FolD	gnl\|CDD\|236760	PRK10792, PRK10792, bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD.	0

>NZ_AP014633.1|WP_045472277.1|484987_485428_+|DUF29-domain-containing-protein
MNNAELYEYDFNGWIHNQISLLKAGKTSEINIEHLIEELEDMGKSNLRELESRFVILIAHLLKWQFQPDQPSSSWRGSINEQRIQISRLLRKVPGLKREIPNAIIDAYSDAVMLAIKDTKLSKSTYPQTCPYTIEQLFDDDFYLES
>NZ_AP014633.1|WP_052491667.1|484322_484874_+|thermonuclease-family-protein
MNEKQLITLTKQLHQQKYPVFIIVLLVVASFLGSGEWLKGLLSTSSNECEVIKVYDGDTLTLQCPGQPQPTRVRMYCIDTPEIKQTPWGTQARDHLRSIIGKTVQVKEIDKDRYGRIVGEVYSGNVNLNLAQVKAGKAAVYDSYCKKPEYKLAEKQAQTAKSGIWSQSGLQQTPWEWRKQSKK
>NZ_AP014633.1|WP_083942692.1|483505_484288_-|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA
MSHTPRKRLGQHFLHDQEIIQRIIAAIAPQPDQHLVEIGPGKGALTFPLLQQRCQLEVIELDTTLVQLLKQQTVSSEHFHIHHADVLKFDFNSLITTQPLRICGNLPYNISTVLLFHLLDYANAIQDMTFMLQKEVVERMVAAPSTAEYGRLSVMLQYRYQIEFLFAVAPRSFYPPPQVDSAVVRLVPYKSPPVTVINQPHFSQIVTQAFSQRRKTLRNSLKGLLDTQEIQALGIDPHRRAETLQLLEFAQLANHFTVNK
>NZ_AP014633.1|WP_083942420.1|481276_483403_-|glycosyl-hydrolase-family-57
MKDMIFTNIKKIELPKTAKLGEGFTVVMVANGEVPFPQLIVRHADGWQWIVKEQQVTYKGKGRYQFHVPPEAYHAGTVYLQIEGCRVAELSAARPEDWIIVHRELPIVGTPPVEQPAPVPTPTITIGESLQPVIYFGIHKHLHQPYYNATDTDAWDGDKDSIFGQRASAYSRFIPAAVRQYIEGGLAHAGLSTSWSGSLIEQLHRCAETGRGQGAFGHWHHELRQLAEAKTALGNPRVDFTAFGFFHPLMALIPGRDIIGQIEWHRGIIRNTFGVESSDILFPPETAFHPQMIPALKQAGVNVVIYDSIHHFRACKDYPYAGATEGLLPPNLAEQENSAVHDWLQLHGVWAPSKISPQLLKPCLLYYVDHEGQRHEIIGVPAERYLGNEDARGGYGALQYEIVMGQIYDQICQTNTYDPKHPPFFILHSDGDNHGGGAESYYTNNTGRLVQMCQRDPRFQLITIKDYLSRFAVDPNNTVQVEPGAWSGADNGDPQFTKWFSWAEKDYSPDLNSWAVLTAFQNVVHSLEDAQQDSDFVNTLKRLLYTAETSCYWYWTGQSGWDAQVTQATNKGMSMAQPALDNLLKAKQDKTGPTIFVPWVRPANPGGKDWGQGGLVDAAPQATFRTFVYDISGIKRVTLHYYKVDGKTKKRVAMENKGTYPSQTNPAIIATPYQAVLPAGTGNIRYFIEAVDKRGNVSYSPVGRIYIA
>NZ_AP014633.1|WP_045472271.1|479500_481207_+|Flp-pilus-assembly-complex-ATPase-component
MGALSKPAHRLGDILLEQHIITSDQLKIALIEQKKNHQQLGKILIGLGFVSEAVIRDLMSESLGQTSVDLSKLVVDHEAIRMVPKHLAERYTLLPINFDKAINRLTVAMADVFNVLALDQLASALGGRIKIEPVIAGEAEIINGIDNWYGFDLSIDGILNEIETGEVDYQSLAISRDEYSQPLVRLVDALLSDAVKRSASDIHFEPEKGFLRVRYRIDGVLQQVRSLHKNYWSAIVVRLKVMSSLNIAETRVPQDGRMSLTLGGRPIDFRVSAQPTVYGENIVLRILDSQRGIMTLEHLGLLEENLIALKLMIARPEGVILITGPTGSGKTTTLYSLLQHLNTEEVNIMTLEDPVEYVLGQVRQTAVNEAVKLDFATGIRSMMRQDPDIILVGEIRDVDTAQMAFRAAMTGHQVYSTLHTNSAIGAIPRLLDIGILPDIMAENIIGIVGQRLVRKLCLGCKQAYLPSDMHQMLLDLKEQQSVTLYTPSSCEQCGHRGYKGRLALMEIFRLDESVQDLIAHRATTYDLRQHAQRMGFRTLAQDGIRRVLEGVSSLEEISRVVDLTSRLN
>NZ_AP014633.1|WP_045472268.1|478808_479141_+|DUF2325-domain-containing-protein
MVIIIGADRLGNIESLLKERGFSDLKHITGRHPKAQKNNPISTSGAQLMILFTDFVGHNVMRNFRKQAREQQIPFIACKRSVGDLAKNLDKCGFAGQSMSCDNCQARCIH
>NZ_AP014633.1|WP_045472266.1|476789_478442_+|GAF-domain-containing-protein
MVKETEHEVLDLLARLKALNKIGVALSAERNGTRLLEMILEEAKRIALADGGTLYTRTEDDRLRFEIMLTDTLNIRSGGTSGIPIALPSLPLYDENGKPNLDKVAVCTAIRGETINIPDAYTSREFEFSGTQAFDKKTGYRSKSFLTVPMKNNEGEVIGVLQLINALDPITREITTFGTAEQELVESLASQAAVALVNQRLLEDQRKLFESFIELIATAIDDKSPYTGGHCRRVPELTMMLADAAAKVTIGPLKDFTMTEEDRYELRVAGWLHDCGKITTPEYVVDKSTKLETIFDRVHLINTRFEVLKRDAEIALLRKQLAAQTRGETVDIKALETQFAQQIATLAEECQFIQKCNMGSEFMVEDDKERVRQIAKRRWVNKNGKITDFLTEDEIYNLTINRGTLTPEERQIINYHIVATINMLEALPYPKYLQRVPEFAGGHHERMDGKGYPKGLIREQMSVQARAMGIADIFEALTARDRPYKKPMSLSQALTILGRMKQDNHIDPDLFDIFIYEKIYLKYAEKFLDPEQIDEVDVTQLPGYKPLVTS
>NZ_AP014633.1|WP_045472262.1|475881_476733_+|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase-FolD
MTAKRLDGKAIAAQLRQHIQQQIQTRLEQGLRPPGLAVILVGDHHASQVYVRQKQNACQEVGIVSKIWSLSTAVSSAELLDLLNQLNEDNEIDGILVQLPLPSHIDSELAIEKIVPHKDVDGFHPYNVGRLALRMPLLRSCTPKGVMTLLAHTQVNLEGLDAVIIGQSHIVGRPMALELLAARCTITVCHSRTRQLADKVRQADIVVAAVGKPNLIQGDWIKPGAIVIDVGMNRLTDGKLVGDVDFASASQPASWITPVPGGVGPMTVASLLENTLQAAQHHS
>NZ_AP014633.1|WP_045472259.1|475029_475743_+|arginyltransferase
MSQSTHFNLYATPPHQCSYLPSLQAMTVFIDPHFPKDTSLYNTLSQHGFRRSGEHLYRPHCHSCEACIPVRLPVRLFKPRRSQRRIWKKNQDLTVSAVAKQFNGEHFDLYCRYLAARHPGAGMDKPTPESYMQFLTSSWSMTVFYEFRWQRQLLAIAVVDQFDKGLSAVYTFFDPDYPHRSLGVYAILWEIEQTQHLQRDWLYLGYWIKECQKMCYKIEYQPLEYYFNGRWQTFPGE
>NZ_AP014633.1|WP_045472256.1|474316_475033_+|leucyl/phenylalanyl-tRNA--protein-transferase
MRRPYWIPAHASPYDFPPLEQALEHPDGLLAIGGDLTPSRIMVAYRQGIFPWYSEDQPILWWSPSQRLVLFPECLKISRSLAKTLRQNKFTVTMDQNFAQIIQECAGPRRHQPGTWITEDIKIAYSQLHHYYFAHSVETWYQGQLVGGLYGVSLGKVFFGESMFSKMSDASKVALVYLVQQLQRWGYELIDCQVHTQHLQKLGAIEISRRHYRTLLDRLSDQTGKTGIWQLESQEIDL
>NZ_AP014633.1|WP_052491668.1|486437_489566_+|hypothetical-protein
MKQRKVLLFLMCWVGLFLPYSFLAAAAPTDSVGATDPTASVLEIKPGFNLFKTVGNGETFIDLSSVGGPTKVSLQGNAKPLAKLNNELLTKVKDVDQAGLAAIDTVVEIKEKKGINLSKGGEVTGEIEMLALSLKSIKPIDIGFLKSFPTGTMADLYVTVGIVDSNSDSTKKLSTGKMIARYEKDNGGSFNFNLGVYPDLTFVKPGGDLNNPQDWLLTTPYTGKPINMSGDGTWHSEKGIFVIDTIVVIHISPSEVHVIILVDSVTKESVNLTRQDVLSLVALPQLSTSSTFPPAGVDETLSLGKFSIRLTQQAGQAWFGIPNCPWGNPNCLIHSRLLYDGHTKIGRSDPHQDGDVIDEINGAKICQSGTANTCNTYLPQLVKDHDFQMFPPLDGVPFDEEPSGTKEIHTQVLSLNMTDLGKCGTKSQDVVRAGLSPLLPSIGEVESLNLSLSSDFPAESFFNMFVEVDVDLGSAGVTTLYNNQPLLVQNGQLNKLPPSVLYTHDVSNTSPLVYDKQTGDTIGWIELAGHGVSEKNSDDQECDQRDQQRRSAFNTTYDQMLMKDLGLLAKGCYSILPQPELEVLGSENYEANGQQWTRYKLAITNSELLPPELFKAAPNLPPCGLNANSSRTWVDIYDSAGPRLYGFCALNSPNQLKDIWFAVPKGQTPPQCVHVELNDRQCNLKYLSNRVCDYTAGTIQFSQPEYKVNENQGRVTLWVERHGGSKGDIAVKYGTTSLTAQAGVDYQPLSGELTWQDGEMTAKPIDVAIVNDNEREADEIFYVTLLDSWGNPNTPQFNKPLHVPVTIEDDDFVKIILPPIFKPLPIFTPINVTIVINPLKLPHRMFSSSFRKTKDRDDTAQLLFDDQSLDFISSLPDTLAELNLPEFTLESDGQMSRLELPIFSAENPQIPQAWYSVWVGNPVELASQDVPVTGIITKPAEEIAYWVFEGQDGKYYQSPLYPALHPQILAALAEAFPQATLTLSAAGRIIFTQGNETSQVKVSYVVTPSGLDTEPLTVKPLNGNFLELSAHGRSQQVQLVKE
>NZ_AP014633.1|WP_045472283.1|489685_490465_-|succinate-dehydrogenase-iron-sulfur-subunit
MVQLTLPPHSVVKKGQVVNPGTGANNVKKFIIYRWDPETPDNPRTDVYEIDLDHCGPMVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNIDGTNTLACTKPIEEIKGAVKIYPLPHMEVIKDLVPDLTHFYAQHAAIRPWLERQTPIPPDQEILQSKADRAKLDGLYECILCACCSTSCPSYWWNGDRYLGPAILLQAYRWLVDSRDEMAGERLDNLEDPFRLYRCHTIMNCTNTCPKGLNPAKAIVEIKKLLIQRR
>NZ_AP014633.1|WP_045472286.1|490477_492268_-|succinate-dehydrogenase-flavoprotein-subunit
MSTAYQIIDHRYDVVVVGAGGAGLRATLGMAEKGLTTACITKVFPTRSHTVAAQGGISASLGNMGPDNWRWHMYDTVKGSDWLGDQDAIEYMCREAVPAIIELEHYGVPFSRTEEGKIYQRPFGGMTTNYGQGIAQRTCAAADRTGHAILHTLYQQSLKYQAEFFIEYFALDLIMDDNGVCRGVMALNLAEGTIHRFAAHMVVLATGGCGRVYFSSTSAHSCTGDGGGMALRAGLPMQDMEFIQFHPTGIYGSGCLITEGARGEGGFLTNSDGERFMERYASTAKDLASRDVVSRAITVEIREGRGVGEHKDHIHLHLEHLGAEVINERLPGISESTRIFAGIDITKEPIPVLPTAHYIMGGIPTNHYGEVVTLKEGNPDKVVRGLIAIGETACVSVHGANRLGSNSLLDIIVFGRAAAIRCSQILTRNAPHKPLPRQAGEETLARLDKLRYANGHLTTAAIRLDMQNTMQNHAAVFRSGATLQAGVEKIQAIFNAFADVKITDRSLIWNSDLMETLELDNLLRQAMVIMNSAGNRTESRGGHAREDYPQRDDNNWLKHTLAWLDLQGQVTLDYRPVHLYTLTDEVEVIPPKARIY
>NZ_AP014633.1|WP_083942421.1|492269_492665_-|succinate-dehydrogenase,-hydrophobic-membrane-anchor-protein
MRLIMNLRTPLSQVRGLGSARAGTHHFILQRLSAMVLVPLSLWFVASLIFFMLRASHASLVSWIKTPWHAEWLILFFLFLFYHAYIGLHEVVVDYVHNPILKMTTVVLMQLVIMTMTTISVLAILRITLGG
>NZ_AP014633.1|WP_045472292.1|492661_493048_-|succinate-dehydrogenase,-cytochrome-b556-subunit
MTKPIRPLSPHLQIYKPQLTSLMSISHRLSGVFLSLSTVVLVYWLMAVVAGETAYQHAQNLFNSWLGLVFLFGWSLALFYHLCNGIRHLSWDIGLGMDIKTVYLTGGLVWLATLLLTGLTWLLAMMMK
>NZ_AP014633.1|WP_045472295.1|493261_493948_-|6-phosphogluconolactonase
MEVNAHLIWQLLANVDRVAEEAGQRILIAANQAIQTRGYFRIVLAGGRTPEQTYSLLTKADTNWSKWHVYYGDERCLPEADEERNSNMAARAWLNAVAIPSPQIHPIPAQLGAIAAARRYTEIIKPILPFDLVLLGMGEDGHTASLFPNQVHSPHELVHPIFNAPKPPTERVSLSILALSQTRELIFLITGRNKREAVAAWQRGDNLPVAQIRALHKATVLIDSMAIP
>NZ_AP014633.1|WP_045472297.1|493995_494907_-|D-hexose-6-phosphate-mutarotase
MSITDSQALNTHFAISNHVEFKTNPGGLTIAEITNDHAVATVALQGGHVMTFRPREQDPVIWLSNAARFELGKSIRGGVPICWPWFGPHTTDRNKPTHGFARTVLWKVLEIKTLDDGETQIALELINTPATQAQWSYPSQLQIIITVGMELRIELITRNTGQETFSIGEALHTYFHVSDVSRIQIQGLEDCHYLDKVDNSQHKQQAGPVTIHSEVDRVYLNTRANCLIEDPGLNRRIRIAKQGSQSTVVWNPWIEKATQMGDFGDPGYLEMVCVETANALDNVVTVKPGETHRLEAVISVESL
>NZ_AP014633.1|WP_045472300.1|495150_496644_-|glucose-6-phosphate-dehydrogenase
MNKPCTYVIFGATGNLARVKLMPALYHLEVAGLLPEGTLILASGRRPWDREKWIAEVKEMLIAKARKGLNETLFERFQQRLHYFQGDLTDLNMYTRLKTLIIDDPIFPTNIAFYMSIRPAEFGMVVQNLSDVGLLNEELGWRRVVIEKPFGYDLDSARALHQRLSRHLHEDQIYRIDHYLGKSTVQNVLVFRFANVMLEPLWNRNYIDHIQITHSETLSVAGRADYYDGAGAMRDMIQSHLLQLLTLVAMEPPVSMEAEAMRDEKVKVLKSIRPIPPNAVHAQTYRAQYTTGVIKGQKVIGYLDEDKVPKSSTTETYAAVKLFIDNWRWAGVPFYLRTGKRMAADQSMISIGFKYPPQQFFRASQIQRMRPNWVLLGIQPTACLKAEMTVKEPGLEMNTRQISLDASLRSSDDVAKDAYEELLLDVIKGDRALFLRYDEVEYAWRVVDPIIRVWAMERDYISTYPAGSWGPEESRRLFDRQDQNWRHSLELDDEMTN
>NZ_AP014633.1|WP_083942422.1|497105_498014_+|hypothetical-protein
MSTYPLTELTLLPNFSLPTQDELPSDDGVPMETERHKKQMDLLIYTLEPRLRQQGSGYVNGNMFIYYSSQQKRHQDFKGPDVFVVLGVPTKERKSWVVWEEGKTPDVVIELLSESTAKFDKTDKKTLYQDRLKVAEYFWFDPFNPNDWAGFKLSGGYYEPLPVENERLVSQRLELALIRWSGTYQGIETIWLRWATLAGELLLLPEEAQTQRAELEAQRAKVAEQRAEVAEQRVEVAEQRVEVAEQRVEVAEQQAKAEAQRAQAAERLAQTATQRADLERQRAEAAEVEMARLKALLAEKNK
>NZ_AP014633.1|WP_052491669.1|498055_498700_+|NYN-domain-containing-protein
MCNVENVSVLLIDLDNCPNQIEQLAQNLEKYARIIVCYGSQPPKISLNLALLLANPIYHKRLEFVGMQKSGKNAADFGLCFYAGRLSAQMSVEQTEYLIVSNDADLDHAVNLLIQQGCKAKRIGNKHTSESAILDLTIIDDLPQKITLIATEYRSKKSAHFKSRPAKKATLLNDIRAFCRNKFPNHEQEIFDFLEQQAYFKVEGEKIIYLTGEK

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Crispr_ID: NZ_AP014633_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP014633_2

619211-619523

Orphan

Consensus_repeat	Method
AATGGTGGATTCGGTGGCGGCGGTGGCT	CRISPRCasFinder
GGAGGCAATGGTGGATTCGGTGGCGGCGGTGGCTACGG	PILER-CR

4 spacers

The CRISPR arrays of NZ_AP014633_2

>merge|NZ_AP014633|2|619211-619523|CRISPRCasFinder,PILER-CR
TATGGTGGATTCGGTGGCAGCAACGGTGGTGGTAGCGGCGGCTTTGCCGGTGGTGGTGGCCATAATGATAGTGGAAATGGCGGTAATGGTGGATTCGGTGGCGGCGGTGGCTTCGGATACTACTATGGATGTGGATACATTACCGGAGGCAATGGTGGGTTCGGTGGCGGCGGTGGCTACGGGTACGGAGAAAGCTACTGCGGAGAATATGGAGGATACAACAGTGGATCCGGAGGTAATGGTGGATTTGGTGGTGGTGGTGGCTACGGCAATGACTCCGATGGTAACAGTGGATTTGGTGGTGGAAGAGGTG

>NZ_AP014633|2|2|619211-619523|CRISPRCasFinder
TATGGTGGATTCGGTGGCAGCAACGGTG	GTGGTAGCGGCGGCTTTGCCGGTGGTGGTGGCCATAATGATAGTGGA
AATGGCGGTAATGGTGGATTCGGTGGCG	GCGGTGGCTTCGGATACTACTATGGATGTGGATACATTACCGGAGGC
AATGGTGGGTTCGGTGGCGGCGGTGGCT	ACGGGTACGGAGAAAGCTACTGCGGAGAATATGGAGGATAC
AACAGTGGATCCGGAGGTAATGGTGGAT	TTGGTGGTGGTGGTGGCTACGGCAATGACTCCGATGGT
AACAGTGGATTTGGTGGTGGAAGAGGTG

>NZ_AP014633|2|1|619212-619392|PILER-CR
ATGGTGGATTCGGTGGCAGCAACGGTGGTGGTAGCGGCGGC	TTTGCCGGTGGTGGTGGCCATAATGATAGTGGAAATGGCGGTAATGGTGGATTCGGTGGC
GGCGGTGGCTTCGGATACTACTATGGATGTGGATACATTAC	CGGAGGCAATGGTGGGTTCGGTGGC
GGCGGTGGCTACGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP014633.1\|WP_045472486.1\|613517_613787_+\|DUF4160-domain-containing-protein	unknown	unknown	gnl\|CDD\|379344
NZ_AP014633.1\|WP_045472526.1\|629141_630272_+\|aminotransferase-class-V-fold-PLP-dependent-enzyme	unknown	unknown	gnl\|CDD\|223594
NZ_AP014633.1\|WP_045472510.1\|622088_622541_+\|DUF29-domain-containing-protein	unknown	unknown	gnl\|CDD\|366774
NZ_AP014633.1\|WP_045472507.1\|621681_621942_+\|DUF2283-domain-containing-protein	unknown	unknown	gnl\|CDD\|378367
NZ_AP014633.1\|WP_045472492.1\|614151_614661_+\|NADH-quinone-oxidoreductase-subunit-NuoE	unknown	unknown	gnl\|CDD\|181024
NZ_AP014633.1\|WP_083942427.1\|628332_628857_+\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|99749
NZ_AP014633.1\|WP_045472501.1\|616492_617764_+\|NADH-quinone-oxidoreductase-subunit-NuoF	unknown	unknown	gnl\|CDD\|131014
NZ_AP014633.1\|WP_045472504.1\|620598_621432_+\|sulfotransferase	unknown	unknown	gnl\|CDD\|379204
NZ_AP014633.1\|WP_045472479.1\|611476_612133_+\|NADH-quinone-oxidoreductase-subunit-C	unknown	unknown	gnl\|CDD\|235691
NZ_AP014633.1\|WP_045472482.1\|612144_613398_+\|NADH-quinone-oxidoreductase-subunit-D	unknown	unknown	gnl\|CDD\|180385
NZ_AP014633.1\|WP_045472520.1\|626396_628124_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235640
NZ_AP014633.1\|WP_045472529.1\|630329_630953_-\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
NZ_AP014633.1\|WP_045472475.1\|610979_611459_+\|NADH-quinone-oxidoreductase-subunit-B	unknown	unknown	gnl\|CDD\|235797
NZ_AP014633.1\|WP_045472498.1\|615979_616462_+\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|99749
NZ_AP014633.1\|WP_045472513.1\|622659_623976_-\|isocitrate-lyase	unknown	unknown	gnl\|CDD\|237893
NZ_AP014633.1\|WP_052491683.1\|614972_615950_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|131171
NZ_AP014633.1\|WP_045472489.1\|613797_614091_+\|DUF2442-domain-containing-protein	unknown	unknown	gnl\|CDD\|378424
NZ_AP014633.1\|WP_045472495.1\|614724_614976_+\|type-II-toxin-antitoxin-system-Phd/YefM-family-antitoxin	unknown	unknown	gnl\|CDD\|376852
NZ_AP014633.1\|WP_045472532.1\|631733_632099_+\|response-regulator	unknown	unknown	gnl\|CDD\|381100
NZ_AP014633.1\|WP_045472516.1\|624017_625625_-\|malate-synthase-A	unknown	unknown	gnl\|CDD\|236432

Protein	Function_ID	Function_description	E-value
NZ_AP014633.1\|WP_045472486.1\|613517_613787_+\|DUF4160-domain-containing-protein	gnl\|CDD\|379344	pfam13711, DUF4160, Domain of unknown function (DUF4160).	1.29178e-22
NZ_AP014633.1\|WP_045472526.1\|629141_630272_+\|aminotransferase-class-V-fold-PLP-dependent-enzyme	gnl\|CDD\|223594	COG0520, csdA, Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones].	6.69319e-94
NZ_AP014633.1\|WP_045472510.1\|622088_622541_+\|DUF29-domain-containing-protein	gnl\|CDD\|366774	pfam01724, DUF29, Domain of unknown function DUF29. This family consists of various hypothetical proteins from cyanobacteria, none of which are functionally described. The aligned region is approximately 120-140 amino acids long corresponding to almost the entire length of the proteins in the family. Structure 3fcn is a small protein that has a novel all-alpha fold. The N-terminal helical hairpin is likely to function as a dimerization module. This protein is a member of PFam family PF01724. The function of this protein is unknown. One protein sequence contains a fusion of this protein and a DnaB domain, suggesting a possible role in DNA helicase activity (hypothetical). Dali hits have low Z and high rmsd, suggesting probably only topological similarities (not functional relevance) (details derived from TOPSAN). The family has several highly conserved sequence motifs, including YD/ExD, DxxNVxEEIE, and CPY/F/W, as well as conserved tryptophans.	2.05961e-62
NZ_AP014633.1\|WP_045472507.1\|621681_621942_+\|DUF2283-domain-containing-protein	gnl\|CDD\|378367	pfam10049, DUF2283, Protein of unknown function (DUF2283). Members of this family of hypothetical bacterial proteins have no known function.	1.06215e-11
NZ_AP014633.1\|WP_045472492.1\|614151_614661_+\|NADH-quinone-oxidoreductase-subunit-NuoE	gnl\|CDD\|181024	PRK07539, PRK07539, NADH-quinone oxidoreductase subunit NuoE.	8.30174e-86
NZ_AP014633.1\|WP_083942427.1\|628332_628857_+\|Uma2-family-endonuclease	gnl\|CDD\|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	3.44275e-23
NZ_AP014633.1\|WP_045472501.1\|616492_617764_+\|NADH-quinone-oxidoreductase-subunit-NuoF	gnl\|CDD\|131014	TIGR01959, NADH-quinone_oxidoreductase_subunit_F, NADH-quinone oxidoreductase, F subunit. This model describes the F chain of complexes that resemble NADH-quinone oxidoreductases. The electron acceptor is a quinone, ubiquinone, in mitochondria and most bacteria, including Escherichia coli, where the recommended gene symbol is nuoF. This family does not have any members in chloroplast or cyanobacteria, where the quinone may be plastoquinone and NADH may be replaced by NADPH, nor in Methanosarcina, where NADH is replaced by F420H2. [Energy metabolism, Electron transport].	0
NZ_AP014633.1\|WP_045472504.1\|620598_621432_+\|sulfotransferase	gnl\|CDD\|379204	pfam13469, Sulfotransfer_3, Sulfotransferase family.	7.48712e-16
NZ_AP014633.1\|WP_045472479.1\|611476_612133_+\|NADH-quinone-oxidoreductase-subunit-C	gnl\|CDD\|235691	PRK06074, PRK06074, NADH dehydrogenase subunit C; Provisional.	1.14154e-89
NZ_AP014633.1\|WP_045472482.1\|612144_613398_+\|NADH-quinone-oxidoreductase-subunit-D	gnl\|CDD\|180385	PRK06075, PRK06075, NADH-quinone oxidoreductase subunit D.	0
NZ_AP014633.1\|WP_045472520.1\|626396_628124_+\|hypothetical-protein	gnl\|CDD\|235640	PRK05901, PRK05901, RNA polymerase sigma factor; Provisional.	1.42109e-06
NZ_AP014633.1\|WP_045472529.1\|630329_630953_-\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	1.21969e-121
NZ_AP014633.1\|WP_045472475.1\|610979_611459_+\|NADH-quinone-oxidoreductase-subunit-B	gnl\|CDD\|235797	PRK06411, PRK06411, NADH-quinone oxidoreductase subunit NuoB.	4.10607e-111
NZ_AP014633.1\|WP_045472498.1\|615979_616462_+\|Uma2-family-endonuclease	gnl\|CDD\|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	1.17935e-14
NZ_AP014633.1\|WP_045472513.1\|622659_623976_-\|isocitrate-lyase	gnl\|CDD\|237893	PRK15063, PRK15063, isocitrate lyase; Provisional.	0
NZ_AP014633.1\|WP_052491683.1\|614972_615950_+\|hypothetical-protein	gnl\|CDD\|131171	TIGR02116, Hypothetical_protein_Rv3358/MT3466/Mb3393., toxin-antitoxin system, toxin component, Txe/YoeB family. The Axe-Txe pair in Enterococcus faecium and the homologous YefM-YoeB pair in Escherichia coli have been shown to act as an antitoxin-toxin pair. This model describes the toxin component. Nearly every example found is next to an identifiable antitoxin, as indicated by match to models TIGR01552 and/or pfam02604. [Cellular processes, Toxin production and resistance, Mobile and extrachromosomal element functions, Other].	0.00155022
NZ_AP014633.1\|WP_045472489.1\|613797_614091_+\|DUF2442-domain-containing-protein	gnl\|CDD\|378424	pfam10387, DUF2442, Protein of unknown function (DUF2442). This family of bacterial and fungal proteins has several members annotated as being putative molybdopterin-guanine dinucleotide biosynthesis protein A; however this could not be verified. Hence the function is not known. This family also includes the DUF3532 that was found to be related and was merged into this family. Members of this family also fall into the NE0471 N-terminal domain-like superfamily, a family of proteins with a unique fold in SCOP:143880.	6.89055e-12
NZ_AP014633.1\|WP_045472495.1\|614724_614976_+\|type-II-toxin-antitoxin-system-Phd/YefM-family-antitoxin	gnl\|CDD\|376852	pfam02604, PhdYeFM_antitox, Antitoxin Phd_YefM, type II toxin-antitoxin system. Members of this family act as antitoxins in type II toxin-antitoxin systems. When bound to their toxin partners, they can bind DNA via the N-terminus and repress the expression of operons containing genes encoding the toxin and the antitoxin. This domain complexes with Txe toxins containing pfam06769, Fic/DOC toxins containing pfam02661 and YafO toxins containing pfam13957.	0.000242122
NZ_AP014633.1\|WP_045472532.1\|631733_632099_+\|response-regulator	gnl\|CDD\|381100	cd17548, REC_DivK-like, phosphoacceptor receiver (REC) domain of DivK and similar proteins. Caulobacter crescentus DivK is an essential response regulator that is involved in the complex phosphorelay pathways controlling both cell division and motility. It localizes cell cycle regulators to specific poles of the cell during division. DivK contains a stand-alone REC domain. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	1.13982e-49
NZ_AP014633.1\|WP_045472516.1\|624017_625625_-\|malate-synthase-A	gnl\|CDD\|236432	PRK09255, PRK09255, malate synthase; Validated.	0

>NZ_AP014633.1|WP_045472501.1|616492_617764_+|NADH-quinone-oxidoreductase-subunit-NuoF
MANELCFKNIHLENSWTLPVYEGTGGYQALRKILQEQPAPQHIIDQLKASALRGRGGAGFSAGLKWSFMLPVRDKPVQKYIVCNSDEGEPGTFKDRDILRYNPHAVIEGMAIAGYTVGATVGYNYIRGEFCEPIDRFEAAIQEAYDAGLLGKNILGSGIDFDLHTHYGAGAYICGEETALLESIEGKKGQPRYKPPFPAAYGLYGKPTTINNTETLASVPSIINNGADWFLKIGKPNNGGPKLFSISGHVNKPGNYEIPMGTPFKELLEMAGGVRQGHKLKAVIPGGSSTPVVKGEVMMDLTMDYDSIASAGSMLGSGAVIVMDDTTDMVKVLARICHFYYEESCGQCTPCREGTGWLSRVVHRIYHGEGRQEDLDLLLDVADKISGRTICALGDAAAMPVISFVKNFREEFQHYIEQRKSMV
>NZ_AP014633.1|WP_045472498.1|615979_616462_+|Uma2-family-endonuclease
MNWQEVCEDKILQNLPFKIELNKWGQIILSPAKVIHSFYQGRIQTLLQSFLTSGIVMPELAIQTGDGVKVADVVWVSDSRADLILAEDVASIAPEICIEVKSTSNTIEEMSEKKAFYFAAGAEEVWICDKNGKLHFYNNQDQIKYSKRVPDFPNQIQRNR
>NZ_AP014633.1|WP_052491683.1|614972_615950_+|hypothetical-protein
MTWKVILSCQAIKDAKKLAQVGYQSSAEDLLKLLETNPYTTPPRYEKLKRELLYHSSLSAPLQEIVTHIQNLNHPKIPYADLNPKTKYFVRIVPRQYTLTKDNQLQANAILGTKPIVFFTTPEGFYGKSLLDIYLDISYEAEDIIRWQRDAEMVAVVFRYPESIVLSNVTDGQLLTPWNNKVYVPTWDNVFSLFHQLAQEATVEPDKKGEFAAEKTFFSTESLKQFVLNFPDAGKQRIKATDYATLKVTGGADWVYRELLERKLSIFEHFLGNGRTLNEITTAAGIKEQTGLFELVGPNIKLRDLPEIAIVNLGKLTMEDTYFKQ
>NZ_AP014633.1|WP_045472495.1|614724_614976_+|type-II-toxin-antitoxin-system-Phd/YefM-family-antitoxin
MLQTTIDNFHQNLQQEVEHCIENHEILHVKRQQGEDFVVISATDWRAIEETLFLNRIPGLVESIYQADQEPLEQGTLLKDLDW
>NZ_AP014633.1|WP_045472492.1|614151_614661_+|NADH-quinone-oxidoreductase-subunit-NuoE
MSTRLSKSNTITLLSAETRTAIDRWLAKYPPEHKQSAVMGALSIVQEANGGWLTTELMDAIADYLEMPPIAVYEVATFYSMYELQPVGRHKLCVCTNVSCMLCGSEDIVAHLEKKLGVKLGETTSDNQFTLKEVECLGACGGAPMMQIGREYHENLTPAKVDEILTKLE
>NZ_AP014633.1|WP_045472489.1|613797_614091_+|DUF2442-domain-containing-protein
MNPRVKYVKPNSDYTIILTFTNGEVKLFDMKPYLDKGIFSELKDISLFNSVKPFLGSIQWQNGQDLCPDTLYLESKPVGVNNKNLRVACPFAQLATK
>NZ_AP014633.1|WP_045472486.1|613517_613787_+|DUF4160-domain-containing-protein
MAVISMFYGIIISMYYFDNKQHHLPHIHVKYQDQEAVISIPEGNLLEGELKTNKMKLLQAWIEIHQEELMADWELASQGETIFKIEPLK
>NZ_AP014633.1|WP_045472482.1|612144_613398_+|NADH-quinone-oxidoreductase-subunit-D
MPEIRNYTLNFGPQHPAAHGVLRLVLELDGEVIERADPHIGLLHRATEKLAETKPFNQSVPYMDRLDYVSMMCNEHAYVMAIERLLGIEPPLRAQYIRVMFDEITRILNHLLWIGAHALDIGAMTVFLYAFREREDLMDCYEAVSGARLHAAYYRPGGVYRDLPDRMPQYQESKWHNQKDIDRLNTNRQGSLLDFIADFTRRFPTYVDEYETLLTDNRIWKQRTVNVGVVSPERALQLGFSGPMIRGSGIEWDLRKKQPYEVYDKVDFDIPVGVNGDCYDRYLVRIEEMRQSNRIIKQCVDWLRANSGAVIIDDYKVAPPPRETMKSDMEALIHHFKLFSEGYCVPEGEVYAAVEHPKGEFGIYLISDGANKPYRLKIRAPGFAHLSAMDEMTRGHMIADVVAIIGTQDIVFGEVDR
>NZ_AP014633.1|WP_045472479.1|611476_612133_+|NADH-quinone-oxidoreductase-subunit-C
MAGSLETLLIQLQERFSDIALEAHIAHRELTIAISATHVFHVCEALRHRFNFSQLIDLCGVDYSQYGQADWETTQASSTGFTRGVSLGVCQEKSEKSRFAVVYHLLSIENNQRIRVRAWIERDPPRIDSIISVWNVANWYEREAFDLYGILFEGHPDLRRILTDYGFIGHPFRKDFPLSGQVEMRYDPSKKRVVYEPVSIEPRVLVPKVIRHDNRYTD
>NZ_AP014633.1|WP_045472475.1|610979_611459_+|NADH-quinone-oxidoreductase-subunit-B
MGVEGLLPESVITTTADTLINWARTGSLWPMTFGLACCAVEMMQAGASRYDLDRFGVVFRPSPRQSDVMIVAGTLTNKMAPALRKVYDQMPIPRWVISMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGIIQLQNKIKRNTIARAS
>NZ_AP014633.1|WP_045472504.1|620598_621432_+|sulfotransferase
MSKIQLNKRIIYVTGLPRAGSTLLCQLLGHHPDIDSTGHSSPLCSVLNGLRHQLSDSEFLLSQLDVDFERGYQCLFNAFLGFIDGWFAESESIWVVDKNRGWLNQLEMVYHLDPNCRMLVCVRELGQIYGSVEAQHQQTLLLDFPDHLAALSHYTRADKLFGHEGVIGMPLKAIENLQDIDNRLQARLYYVVFEHLMKEPVTVMREIYQWLNLPDAPFDPQRLKVKPHESDSYYRFKYLHKTYPRIQPPAYHSIPPRIEVELRKNFAWFYQIFYPEN
>NZ_AP014633.1|WP_045472507.1|621681_621942_+|DUF2283-domain-containing-protein
MKIYYDNEVDAVYIKLGEESPEGVIEMSAGINLDITTKGKLVGIEILNASIKMDIQTILSYSLELNEETLFARKNATQADISISNL
>NZ_AP014633.1|WP_045472510.1|622088_622541_+|DUF29-domain-containing-protein
METITEYEKDFYAWLIKNAQLIRNKQFTEIDAEQIAEELESMGRSEKRELISRLTVLLAHLLKWQFQSVRRDRSWNNTILTQRIDIHELLKDSPSLRSELESKIEIAYEKAKLMAEDETGIDKKTFSSLCPFSLEQILDNTFFPEDDKSI
>NZ_AP014633.1|WP_045472513.1|622659_623976_-|isocitrate-lyase
MSTHHDIDLLSRVKSLEHDWAENPRWNGIKRGYTPADVIRLRGSITIEYTLAKIGAEKLWQRLTTQDYVHALGAVTGNQAMQMARARLKAIYLSGWQVAADANTAGQMYPDQSLYPADSVPQMVQKINNTLLRADQIHHAEGDVEIDWFLPIVADAEAGFGGVLNGFELMKAMIEAGAAGVHFEDQLAAAKKCGHMGGKVLVPTQEAIHKLISARLAADIMGVPTLLVARTDALGASLLTSDIDPRDQEFITGQRTVEGFYQTKAGLAQGIARGLAYAPYADLIWMETSKPDVEQARQFAEAIHKQFPGKMLAYNCSPSFNWKFNLDDMTIAKFQRELGAMGYKFQFITLAGFHSLNFSMFELATKYREQGMTAYVELQEKEFAAEKRGYTATKHQREVGAGFFDEVTQVIYGGHSSVTALHGSTEEEQFTENSVAVA
>NZ_AP014633.1|WP_045472516.1|624017_625625_-|malate-synthase-A
MSAPPIENQKLSLQIIGKVTAEFATILTTSALAFVEDLVKQFTPHRDELLARRLERQQQIDVGQLPDFFPATAHIRQDNWQVGPTPADLQDRRVEITGPVDRKMIINALNSGAKVFLADFEDAQSPTWSGLIEGQINLRDAVNQVIEYHSPEGKRYQLNSQTATLLVRPRGWHLPEKHMLWQGKPIPGALMDFGLYFFHNAHTLITKGSGPYFYLPKLESHLEARLWNDIFNYAQDALEIPRGTIKATVLIETILGAFEMEEMLYELREHCVGLNCGRWDYIFSFIKRFHKYPDFVLPGREQITMTSHFLRSYSQKVIQVCHRRGAHAMGGMAAQIPIKNDPQANEMALTKVRADKEREAKDGHDGTWVAHPGLVPIAVEIFNKYMPQPNQKDRQLETIDITAKDLLTLPTGNITEAGLRNNISAALQYLEAWLGGNGCVPINNLMEDAATAEIARAQLWQWIHYPKGVLNDGRKITVDLVRQTIHQELESIRNQVGEPRYQAGHYPLAAKLLEQITTQDEFAEFLTLVAYEHLP
>NZ_AP014633.1|WP_045472520.1|626396_628124_+|hypothetical-protein
MSLDNLIENKLSINQPVRKGINTGVITKTLYDEFMSIVANFSERKRLIVLRRLGFNGTCESLENIGQTLQVTRERVRQIEAICLETIKQNCGNKLSEKLQKCLVKRQEPLYLDSLALEDEWFDGFLERPIFLAQIIEKLTVGNYSVFAVKERLIVAQINAEQWFELKAEILNYLKSQLANKLSQEKVTQFIQRRATSYGAAELANLLQESLQEKLHFACVKSKGPKILCSIGRGLTHVLTTLLVEAKEPLHYTEIARQCSEQLGRQVEAYVHNTLKNLAYLYGRGVYGTLDHFPLNNKDKKAILAAVETLILEGAPTRQWTCSELITLLKPKIPSLPKKLDKYVLNILLGESSLLKSVGRLVWVKKTRNNHHKVSRVDLQQACTEIIAKSKSPISTHEIKRLIVKQRGVDEYFTIFPSQKIARIKPNIWGLVERDFGVTSEQRHHLLDTLNDLLEQRQEGLHITELKTSLQVIGVIVPRDFTNYMLMSLTQTDSRFKVRRGQIVGLARWIDGKRVTVKEAVEQLAQNFTSPMSMYDLRHSVEKMVQHEVKQPLHRLLENANIVYDERSNLWNLRS
>NZ_AP014633.1|WP_083942427.1|628332_628857_+|Uma2-family-endonuclease
MSVIFDSDEVLAKEMKMPSKRHSLTQTNLTVLLGNDERFSTFVELSLDVTSIDLSQFGLKNQDEMVPDISVYLESPPLVDEPGEDEVRVTKMPDLAIEVLSPTQSINELLKKIKAYFALGIKSCWLVMPALEEIRVFSHQLQHYKNFDINQSEQVDDEVMDIHLPIQKVFRRRN
>NZ_AP014633.1|WP_045472526.1|629141_630272_+|aminotransferase-class-V-fold-PLP-dependent-enzyme
MSVDLEQEFPLSEDIIYLNHAAVSPWPRRTAEAVQRFALENMTQGARNYVQWEQQEQLLREQFRNLLNAPATSDIALLKNTSEALSVVAYGLNWQLGDNIVITDQEFPSNRIVWESLQNQGVTVRQAPIASVADPEVALFALVDEHTRLIAVSSVQYASGLRMDLAKIGLFCRHHGILFCIDAIQSLGALPFDVQAIQADFVMADGHKWLLGPEGVAVFYCRAALREQLQLKQYGWHMVENANNYATKTWTVAQNARRFECGSPNQLGIQALSASLSLLLEIGMATVEKRVLANTHLLLAGLTQLPNIEILSPQQSNRYAGIVTFRHQQLETQDLFQQLLSKGVICAKRGGGIRFSPHFYLSTTKLTRAIASISCV
>NZ_AP014633.1|WP_045472529.1|630329_630953_-|adenylyl-sulfate-kinase
MTTPSPKSSNTVWHHATVTRERRAKLNGHKSVLLWFTGLSGAGKSTLAHALEESLYQMGYHTFVLDGDNVRHGLCGDLGFSNEARVENIRRISEVAKLFVEAGVIVLTAFISPFRADRAKARNLVGADFFEIYCRCPLDVCEERDVKGLYRRARAGEIKEFTGISSPYEEPEQPELVVETSGRSIEDCVEQILNYLIQLGIYEPNPR
>NZ_AP014633.1|WP_045472532.1|631733_632099_+|response-regulator
MPKILLVEDNEMNRDMLSRRLKRKGFDVVIAVDGGQGVDMAHNEKPDLILMDMSLPVKDGWTATKELKAAADTQNIPVIALTAHAMSGDREQALAAGCDDYDTKPIELPRLLGKIETLLAR

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Crispr_ID: NZ_AP014633_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP014633_3

656304-660199

TypeI-B

Consensus_repeat	Method
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	CRISPRCasFinder
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	CRT
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	PILER-CR
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	PILER-CR

53 spacers

cas4,cas2,cas1,cas6,cas3,cas5,cas7

The CRISPR arrays of NZ_AP014633_3

>merge|NZ_AP014633|3|656304-660199|CRISPRCasFinder,CRT,PILER-CR,PILER-CR
GAATATTCTTACCTTGTACTGGATATAGCTCAAGAACGGTTTGGGTAGAAATTAAATCTCAATAACATTAGGAGGTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGCTTAGCTTCTGCAACAGCTACTCCGAATGGTGGTGCGTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGCGTGAATACGGTGAATGGTGGTGGTGGGGAATTAAGGTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGCTCCAATTGTTCTGACGTGGTAATGAGTATGATTGATAAGTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGCCGGTTCGCACTCCAGTGGAGTGGGTACGATATCAAGTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGCCGTATACTTTCTGCTCTTCCGGTCAACATCTCTAGTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGCTTAATTGTGTCAGGAGTACCGGTATGAGTATCTTCGTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGCTTGCTTTTATCATATACCCCCCACTATGTCTATATCGTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGCTATGACTGGTACAGTAACAGACCCGTCAATTGTTTAGTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGCCATTAATTTCCTTCTAACTACTGAACAATCGCAGTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGCCCGCATTGGCTCATCAGTATGAAGGAAACTATGGTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGCAGAAACCTTAACCTGAAAGCCTTTATATTTCCCAAGTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGCGCCATCGTCTGGGAAAAAGCTTTTTATTGAGGTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGCTTCTCGTCATCGGTCTTAGGGCTGGCCAATACTCTGTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGCAAGAGTTTGGACAGCAGAGTTAGCATCAAGCCCCCTGTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGCTTTAAAATAATTTAACTTAGGATTATCCAATTTTTGTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGCTATACATGTAAACTGGGGTGCTCCTGGTAGTTAGTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGCGGGGATGTGACCAAGGCTAAAGGAGTATCCGGTTTTTGTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGCAGTTCTGGTGTGCCAGTGCTATTCAAATTGAACGGGGTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGCCGGAGCTCCTACCCAGTGACATCCGCTTGTAGTTTCAGTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGCTTGCATTAGAAACATCAGTAATCCCAAAAAAATTGGGTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGCCTGTTAAACAACCAGTAGAAGTAATTGATCAACCAGGTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGCTTTTGAACATTCGGTAGTGGCGGTGGACAATGTAAAGTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGCTTTTGATATGCCCTTTTTTTTCAATTTCTGATAACCGCGTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGCCAAAACCCGGATGTTACTTTTGCTAATGACGATTGGAAGTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGCTATATGGTAGATGATGAATATGGTGTGACCACAATTGTGTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGCATGATCACCGCTTTGAGAGAACTGTTAGAACCTACATAGTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGCAAGTTTTCGATTTAAGATAGATGCCGATGATGATGGTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGCTTTCTGCATAAAAGTCGGAATCTTTATCTAGAACAGGTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGCGGTTGAAAAACTTGAACTCACCGATGTAACAGGCAAGTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGCTTTTTAGCGCTGCTAACGATGTGTATCATTCTACGGGTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGCGTATAGTACAGTATAGTATAGTATAGTATATCCGAGTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGCTTCATGCTTACCTCTAATTCCTGTTCAACATTGTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGCTCTGTACTCCTGCCAAACATTATTTTCCACATCAGTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGCGCAACGGCTATGTCACCACCTGCAGCAATCGTATCGGGTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGCTCCGTATTTTGAACCTCGAATAAATCGTAGCAAAAACGTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGCCGCCATCTGGCAAGGTAATTCCCAGCGCCCAACAAGTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGCGAACAGGAGTAGGAGATTGAAAATTCTCAAGAGGCCTGTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGCTATTTTTTCGGTATTTCTAAAAAGGGGGATTTTACGTGTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGCCTGTCCCTCTGGTTGGAAAATTGTTCGTTTGTAGTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGCCCATCAAAAGTTTCGTAAGCCGAACGTCCTGAAGGGTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGCCTTGTGGGGTTTTCCCAACTCGGGCAGTTCAGTTGTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGCTTTATATTCTTTCTGAGAGCCGTTTAATTTTAGAAGTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGCAATTCTTCGCGGGAACGTTTGCAGGTGACTTATTGAAGTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGCAATAATATCATTCATCAAGACCCCCAATAGATACAAGTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGCTTGGGAATCGGCAGCCTTGGCACGAGCAGAATAGTAGTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGCCAGTTTCATCGGTTTCAACTACCGGTTCATCGGTTTCAAGTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGCTAGTTAGCAAAAGGCTTTGAATATTAGAGCCTTATACGTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGCATGTACACAATACCCGAAGGCGGAGGTTCTGAATACGTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGCGGTTCACCGAGGCAAATTATAATCTGCCTTCCCTTAAAAGTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGCCCCAAACGCTCACGAAAAAGTTTTCGAAGCCGATCAGTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGCATTATCTTTTTTCACCTTCTGAGTTTAAAACTCTGTTAGTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGCCTTAACCCAGACCGTTAAGTTGGCAATTGCACCTGAATGTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC

>NZ_AP014633|3|3|656304-660199|CRISPRCasFinder
GAATATTCTTACCTTGTACTGGATATAGCTCAAGAAC	GGTTTGGGTAGAAATTAAATCTCAATAACATTAGGAG
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TTAGCTTCTGCAACAGCTACTCCGAATGGTGGTGC
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	GTGAATACGGTGAATGGTGGTGGTGGGGAATTAAG
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TCCAATTGTTCTGACGTGGTAATGAGTATGATTGATAA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	CGGTTCGCACTCCAGTGGAGTGGGTACGATATCAA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	CGTATACTTTCTGCTCTTCCGGTCAACATCTCTA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TTAATTGTGTCAGGAGTACCGGTATGAGTATCTTC
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TTGCTTTTATCATATACCCCCCACTATGTCTATATC
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TATGACTGGTACAGTAACAGACCCGTCAATTGTTTA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	CATTAATTTCCTTCTAACTACTGAACAATCGCA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	CCGCATTGGCTCATCAGTATGAAGGAAACTATG
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	AGAAACCTTAACCTGAAAGCCTTTATATTTCCCAA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	GCCATCGTCTGGGAAAAAGCTTTTTATTGAG
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TTCTCGTCATCGGTCTTAGGGCTGGCCAATACTCT
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	AAGAGTTTGGACAGCAGAGTTAGCATCAAGCCCCCT
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TTTAAAATAATTTAACTTAGGATTATCCAATTTTT
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TATACATGTAAACTGGGGTGCTCCTGGTAGTTA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	GGGGATGTGACCAAGGCTAAAGGAGTATCCGGTTTTT
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	AGTTCTGGTGTGCCAGTGCTATTCAAATTGAACGGG
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	CGGAGCTCCTACCCAGTGACATCCGCTTGTAGTTTCA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TTGCATTAGAAACATCAGTAATCCCAAAAAAATTGG
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	CTGTTAAACAACCAGTAGAAGTAATTGATCAACCAG
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TTTTGAACATTCGGTAGTGGCGGTGGACAATGTAAA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TTTTGATATGCCCTTTTTTTTCAATTTCTGATAACCGC
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	CAAAACCCGGATGTTACTTTTGCTAATGACGATTGGAA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TATATGGTAGATGATGAATATGGTGTGACCACAATTGT
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	ATGATCACCGCTTTGAGAGAACTGTTAGAACCTACATA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	AAGTTTTCGATTTAAGATAGATGCCGATGATGATG
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TTTCTGCATAAAAGTCGGAATCTTTATCTAGAACAG
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	GGTTGAAAAACTTGAACTCACCGATGTAACAGGCAA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TTTTTAGCGCTGCTAACGATGTGTATCATTCTACGG
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	GTATAGTACAGTATAGTATAGTATAGTATATCCGA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TTCATGCTTACCTCTAATTCCTGTTCAACATT
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TCTGTACTCCTGCCAAACATTATTTTCCACATCA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	GCAACGGCTATGTCACCACCTGCAGCAATCGTATCGG
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TCCGTATTTTGAACCTCGAATAAATCGTAGCAAAAAC
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	CGCCATCTGGCAAGGTAATTCCCAGCGCCCAACAA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	GAACAGGAGTAGGAGATTGAAAATTCTCAAGAGGCCT
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TATTTTTTCGGTATTTCTAAAAAGGGGGATTTTACGT
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	CTGTCCCTCTGGTTGGAAAATTGTTCGTTTGTA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	CCATCAAAAGTTTCGTAAGCCGAACGTCCTGAAGG
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	CTTGTGGGGTTTTCCCAACTCGGGCAGTTCAGTT
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TTTATATTCTTTCTGAGAGCCGTTTAATTTTAGAA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	AATTCTTCGCGGGAACGTTTGCAGGTGACTTATTGAA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	AATAATATCATTCATCAAGACCCCCAATAGATACAA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TTGGGAATCGGCAGCCTTGGCACGAGCAGAATAGTA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	CAGTTTCATCGGTTTCAACTACCGGTTCATCGGTTTCAA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TAGTTAGCAAAAGGCTTTGAATATTAGAGCCTTATAC
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	ATGTACACAATACCCGAAGGCGGAGGTTCTGAATAC
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	GGTTCACCGAGGCAAATTATAATCTGCCTTCCCTTAAAA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	CCCAAACGCTCACGAAAAAGTTTTCGAAGCCGATCA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	ATTATCTTTTTTCACCTTCTGAGTTTAAAACTCTGTTA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	CTTAACCCAGACCGTTAAGTTGGCAATTGCACCTGAAT
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC

>NZ_AP014633|3|1|656304-660199|CRT
GAATATTCTTACCTTGTACTGGATATAGCTCAAGAAC	GGTTTGGGTAGAAATTAAATCTCAATAACATTAGGAG
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TTAGCTTCTGCAACAGCTACTCCGAATGGTGGTGC
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	GTGAATACGGTGAATGGTGGTGGTGGGGAATTAAG
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TCCAATTGTTCTGACGTGGTAATGAGTATGATTGATAA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	CGGTTCGCACTCCAGTGGAGTGGGTACGATATCAA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	CGTATACTTTCTGCTCTTCCGGTCAACATCTCTA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TTAATTGTGTCAGGAGTACCGGTATGAGTATCTTC
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TTGCTTTTATCATATACCCCCCACTATGTCTATATC
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TATGACTGGTACAGTAACAGACCCGTCAATTGTTTA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	CATTAATTTCCTTCTAACTACTGAACAATCGCA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	CCGCATTGGCTCATCAGTATGAAGGAAACTATG
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	AGAAACCTTAACCTGAAAGCCTTTATATTTCCCAA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	GCCATCGTCTGGGAAAAAGCTTTTTATTGAG
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TTCTCGTCATCGGTCTTAGGGCTGGCCAATACTCT
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	AAGAGTTTGGACAGCAGAGTTAGCATCAAGCCCCCT
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TTTAAAATAATTTAACTTAGGATTATCCAATTTTT
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TATACATGTAAACTGGGGTGCTCCTGGTAGTTA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	GGGGATGTGACCAAGGCTAAAGGAGTATCCGGTTTTT
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	AGTTCTGGTGTGCCAGTGCTATTCAAATTGAACGGG
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	CGGAGCTCCTACCCAGTGACATCCGCTTGTAGTTTCA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TTGCATTAGAAACATCAGTAATCCCAAAAAAATTGG
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	CTGTTAAACAACCAGTAGAAGTAATTGATCAACCAG
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TTTTGAACATTCGGTAGTGGCGGTGGACAATGTAAA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TTTTGATATGCCCTTTTTTTTCAATTTCTGATAACCGC
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	CAAAACCCGGATGTTACTTTTGCTAATGACGATTGGAA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TATATGGTAGATGATGAATATGGTGTGACCACAATTGT
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	ATGATCACCGCTTTGAGAGAACTGTTAGAACCTACATA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	AAGTTTTCGATTTAAGATAGATGCCGATGATGATG
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TTTCTGCATAAAAGTCGGAATCTTTATCTAGAACAG
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	GGTTGAAAAACTTGAACTCACCGATGTAACAGGCAA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TTTTTAGCGCTGCTAACGATGTGTATCATTCTACGG
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	GTATAGTACAGTATAGTATAGTATAGTATATCCGA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TTCATGCTTACCTCTAATTCCTGTTCAACATT
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TCTGTACTCCTGCCAAACATTATTTTCCACATCA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	GCAACGGCTATGTCACCACCTGCAGCAATCGTATCGG
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TCCGTATTTTGAACCTCGAATAAATCGTAGCAAAAAC
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	CGCCATCTGGCAAGGTAATTCCCAGCGCCCAACAA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	GAACAGGAGTAGGAGATTGAAAATTCTCAAGAGGCCT
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TATTTTTTCGGTATTTCTAAAAAGGGGGATTTTACGT
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	CTGTCCCTCTGGTTGGAAAATTGTTCGTTTGTA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	CCATCAAAAGTTTCGTAAGCCGAACGTCCTGAAGG
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	CTTGTGGGGTTTTCCCAACTCGGGCAGTTCAGTT
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TTTATATTCTTTCTGAGAGCCGTTTAATTTTAGAA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	AATTCTTCGCGGGAACGTTTGCAGGTGACTTATTGAA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	AATAATATCATTCATCAAGACCCCCAATAGATACAA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TTGGGAATCGGCAGCCTTGGCACGAGCAGAATAGTA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	CAGTTTCATCGGTTTCAACTACCGGTTCATCGGTTTCAA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TAGTTAGCAAAAGGCTTTGAATATTAGAGCCTTATAC
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	ATGTACACAATACCCGAAGGCGGAGGTTCTGAATAC
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	GGTTCACCGAGGCAAATTATAATCTGCCTTCCCTTAAAA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	CCCAAACGCTCACGAAAAAGTTTTCGAAGCCGATCA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	ATTATCTTTTTTCACCTTCTGAGTTTAAAACTCTGTTA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	CTTAACCCAGACCGTTAAGTTGGCAATTGCACCTGAAT
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC

>NZ_AP014633|3|2|656378-657346|PILER-CR
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TTAGCTTCTGCAACAGCTACTCCGAATGGTGGTGC
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	GTGAATACGGTGAATGGTGGTGGTGGGGAATTAAG
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TCCAATTGTTCTGACGTGGTAATGAGTATGATTGATAA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	CGGTTCGCACTCCAGTGGAGTGGGTACGATATCAA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	CGTATACTTTCTGCTCTTCCGGTCAACATCTCTA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TTAATTGTGTCAGGAGTACCGGTATGAGTATCTTC
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TTGCTTTTATCATATACCCCCCACTATGTCTATATC
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TATGACTGGTACAGTAACAGACCCGTCAATTGTTTA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	CATTAATTTCCTTCTAACTACTGAACAATCGCA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	CCGCATTGGCTCATCAGTATGAAGGAAACTATG
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	AGAAACCTTAACCTGAAAGCCTTTATATTTCCCAA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	GCCATCGTCTGGGAAAAAGCTTTTTATTGAG
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TTCTCGTCATCGGTCTTAGGGCTGGCCAATACTCT
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGCAAGAGTTTGGACAGCAGAGTTAGCATCAAGCCCCCTGTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGCTTTAAAATAATTTAACTTAGGATTATCCAATTTTTGTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TATACATGTAAACTGGGGTGCTCCTGGTAGTTA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	GGGGATGTGACCAAGGCTAAAGGAGTATCCGGTTTTT
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	AGTTCTGGTGTGCCAGTGCTATTCAAATTGAACGGG
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	CGGAGCTCCTACCCAGTGACATCCGCTTGTAGTTTCA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TTGCATTAGAAACATCAGTAATCCCAAAAAAATTGG
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	CTGTTAAACAACCAGTAGAAGTAATTGATCAACCAG
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TTTTGAACATTCGGTAGTGGCGGTGGACAATGTAAA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TTTTGATATGCCCTTTTTTTTCAATTTCTGATAACCGC
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	CAAAACCCGGATGTTACTTTTGCTAATGACGATTGGAA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TATATGGTAGATGATGAATATGGTGTGACCACAATTGT
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	ATGATCACCGCTTTGAGAGAACTGTTAGAACCTACATA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	AAGTTTTCGATTTAAGATAGATGCCGATGATGATG
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TTTCTGCATAAAAGTCGGAATCTTTATCTAGAACAG
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	GGTTGAAAAACTTGAACTCACCGATGTAACAGGCAA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TTTTTAGCGCTGCTAACGATGTGTATCATTCTACGG
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	GTATAGTACAGTATAGTATAGTATAGTATATCCGA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TTCATGCTTACCTCTAATTCCTGTTCAACATT
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TCTGTACTCCTGCCAAACATTATTTTCCACATCA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	GCAACGGCTATGTCACCACCTGCAGCAATCGTATCGG
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TCCGTATTTTGAACCTCGAATAAATCGTAGCAAAAAC
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	CGCCATCTGGCAAGGTAATTCCCAGCGCCCAACAA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	GAACAGGAGTAGGAGATTGAAAATTCTCAAGAGGCCT
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TATTTTTTCGGTATTTCTAAAAAGGGGGATTTTACGT
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	CTGTCCCTCTGGTTGGAAAATTGTTCGTTTGTA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	CCATCAAAAGTTTCGTAAGCCGAACGTCCTGAAGG
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	CTTGTGGGGTTTTCCCAACTCGGGCAGTTCAGTT
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TTTATATTCTTTCTGAGAGCCGTTTAATTTTAGAA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	AATTCTTCGCGGGAACGTTTGCAGGTGACTTATTGAA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	AATAATATCATTCATCAAGACCCCCAATAGATACAA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TTGGGAATCGGCAGCCTTGGCACGAGCAGAATAGTA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	CAGTTTCATCGGTTTCAACTACCGGTTCATCGGTTTCAA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TAGTTAGCAAAAGGCTTTGAATATTAGAGCCTTATAC
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	ATGTACACAATACCCGAAGGCGGAGGTTCTGAATAC
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	GGTTCACCGAGGCAAATTATAATCTGCCTTCCCTTAAAA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	CCCAAACGCTCACGAAAAAGTTTTCGAAGCCGATCA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	ATTATCTTTTTTCACCTTCTGAGTTTAAAACTCTGTTA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	CTTAACCCAGACCGTTAAGTTGGCAATTGCACCTGAAT


>NZ_AP014633|3|3|657455-660199|PILER-CR
	TTAGCTTCTGCAACAGCTACTCCGAATGGTGGTGC
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	GTGAATACGGTGAATGGTGGTGGTGGGGAATTAAG
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TCCAATTGTTCTGACGTGGTAATGAGTATGATTGATAA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	CGGTTCGCACTCCAGTGGAGTGGGTACGATATCAA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	CGTATACTTTCTGCTCTTCCGGTCAACATCTCTA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TTAATTGTGTCAGGAGTACCGGTATGAGTATCTTC
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TTGCTTTTATCATATACCCCCCACTATGTCTATATC
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TATGACTGGTACAGTAACAGACCCGTCAATTGTTTA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	CATTAATTTCCTTCTAACTACTGAACAATCGCA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	CCGCATTGGCTCATCAGTATGAAGGAAACTATG
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	AGAAACCTTAACCTGAAAGCCTTTATATTTCCCAA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	GCCATCGTCTGGGAAAAAGCTTTTTATTGAG
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TTCTCGTCATCGGTCTTAGGGCTGGCCAATACTCT
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGCAAGAGTTTGGACAGCAGAGTTAGCATCAAGCCCCCTGTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGCTTTAAAATAATTTAACTTAGGATTATCCAATTTTTGTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TATACATGTAAACTGGGGTGCTCCTGGTAGTTA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	GGGGATGTGACCAAGGCTAAAGGAGTATCCGGTTTTT
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	AGTTCTGGTGTGCCAGTGCTATTCAAATTGAACGGG
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	CGGAGCTCCTACCCAGTGACATCCGCTTGTAGTTTCA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TTGCATTAGAAACATCAGTAATCCCAAAAAAATTGG
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	CTGTTAAACAACCAGTAGAAGTAATTGATCAACCAG
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TTTTGAACATTCGGTAGTGGCGGTGGACAATGTAAA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TTTTGATATGCCCTTTTTTTTCAATTTCTGATAACCGC
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	CAAAACCCGGATGTTACTTTTGCTAATGACGATTGGAA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TATATGGTAGATGATGAATATGGTGTGACCACAATTGT
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	ATGATCACCGCTTTGAGAGAACTGTTAGAACCTACATA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	AAGTTTTCGATTTAAGATAGATGCCGATGATGATG
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TTTCTGCATAAAAGTCGGAATCTTTATCTAGAACAG
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	GGTTGAAAAACTTGAACTCACCGATGTAACAGGCAA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TTTTTAGCGCTGCTAACGATGTGTATCATTCTACGG
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	GTATAGTACAGTATAGTATAGTATAGTATATCCGA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TTCATGCTTACCTCTAATTCCTGTTCAACATT
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TCTGTACTCCTGCCAAACATTATTTTCCACATCA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	GCAACGGCTATGTCACCACCTGCAGCAATCGTATCGG
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TCCGTATTTTGAACCTCGAATAAATCGTAGCAAAAAC
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	CGCCATCTGGCAAGGTAATTCCCAGCGCCCAACAA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	GAACAGGAGTAGGAGATTGAAAATTCTCAAGAGGCCT
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TATTTTTTCGGTATTTCTAAAAAGGGGGATTTTACGT
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	CTGTCCCTCTGGTTGGAAAATTGTTCGTTTGTA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	CCATCAAAAGTTTCGTAAGCCGAACGTCCTGAAGG
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	CTTGTGGGGTTTTCCCAACTCGGGCAGTTCAGTT
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TTTATATTCTTTCTGAGAGCCGTTTAATTTTAGAA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	AATTCTTCGCGGGAACGTTTGCAGGTGACTTATTGAA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	AATAATATCATTCATCAAGACCCCCAATAGATACAA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TTGGGAATCGGCAGCCTTGGCACGAGCAGAATAGTA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	CAGTTTCATCGGTTTCAACTACCGGTTCATCGGTTTCAA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	TAGTTAGCAAAAGGCTTTGAATATTAGAGCCTTATAC
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	ATGTACACAATACCCGAAGGCGGAGGTTCTGAATAC
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	GGTTCACCGAGGCAAATTATAATCTGCCTTCCCTTAAAA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	CCCAAACGCTCACGAAAAAGTTTTCGAAGCCGATCA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	ATTATCTTTTTTCACCTTCTGAGTTTAAAACTCTGTTA
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC	CTTAACCCAGACCGTTAAGTTGGCAATTGCACCTGAAT
GTTTCAATCCTTGTTGTACTGGATATAGCTCAAGAGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP014633.1\|WP_045472612.1\|667480_668434_-\|type-I-B-CRISPR-associated-protein-Cas7/Csh2	cas7	cd09690_cas7_CAS-I-B	gnl\|CDD\|274217
NZ_AP014633.1\|WP_045472594.1\|662571_662775_+\|type-II-toxin-antitoxin-system-HicB-family-antitoxin	unknown	unknown	gnl\|CDD\|224514
NZ_AP014633.1\|WP_045472567.1\|648794_649010_+\|type-II-toxin-antitoxin-system-HicB-family-antitoxin	unknown	unknown	gnl\|CDD\|224514
NZ_AP014633.1\|WP_045472561.1\|646023_648054_-\|chemotaxis-protein-CheA	unknown	unknown	gnl\|CDD\|223716
NZ_AP014633.1\|WP_045478764.1\|660466_661045_-\|CRISPR-associated-protein-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	gnl\|CDD\|273040
NZ_AP014633.1\|WP_045472588.1\|661074_661380_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_AP014633.1\|WP_045472576.1\|650369_650615_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225489
NZ_AP014633.1\|WP_045472573.1\|649395_650301_+\|acetylglutamate-kinase	unknown	unknown	gnl\|CDD\|234869
NZ_AP014633.1\|WP_045472578.1\|650629_653638_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|380640
NZ_AP014633.1\|WP_045472606.1\|666395_666650_-\|type-II-toxin-antitoxin-system-prevent-host-death-family-antitoxin	unknown	unknown	gnl\|CDD\|171099
NZ_AP014633.1\|WP_045472585.1\|655733_656300_+\|CDP-diacylglycerol--glycerol-3-phosphate-3-phosphatidyltransferase	unknown	unknown	gnl\|CDD\|182763
NZ_AP014633.1\|WP_045472597.1\|662851_663535_-\|hypothetical-protein	cas6	cls000004_cas6_CAS-I:CAS-III	gnl\|CDD\|379957
NZ_AP014633.1\|WP_045472591.1\|661376_662354_-\|CRISPR-associated-endonuclease-Cas1	cas1	pfam01867_cas1_CAS-I:CAS-II:CAS-III	gnl\|CDD\|376633
NZ_AP014633.1\|WP_045472558.1\|645515_646004_-\|chemotaxis-protein	unknown	unknown	gnl\|CDD\|238374
NZ_AP014633.1\|WP_083942430.1\|663522_665973_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_AP014633.1\|WP_045472570.1\|649006_649231_+\|type-II-toxin-antitoxin-system-HicA-family-toxin	unknown	unknown	gnl\|CDD\|224638
NZ_AP014633.1\|WP_045472581.1\|653910_655743_+\|excinuclease-ABC-subunit-UvrC	unknown	unknown	gnl\|CDD\|234792
NZ_AP014633.1\|WP_045472564.1\|648168_648537_-\|response-regulator	unknown	unknown	gnl\|CDD\|381110
NZ_AP014633.1\|WP_045472603.1\|666135_666399_-\|Txe/YoeB-family-addiction-module-toxin	unknown	unknown	gnl\|CDD\|284238
NZ_AP014633.1\|WP_052491685.1\|666718_667468_-\|CRISPR-associated-protein-Cas5	cas5	cls001430_cas5_CAS-I-B	gnl\|CDD\|131641

Protein	Function_ID	Function_description	E-value
NZ_AP014633.1\|WP_045472612.1\|667480_668434_-\|type-I-B-CRISPR-associated-protein-Cas7/Csh2	gnl\|CDD\|274217	TIGR02590, hypothetical_protein_MM_0563, CRISPR-associated protein Cas7/Csh2, subtype I-B/HMARI. This model represents one of two closely related CRISPR-associated proteins that belong to the larger family of TIGR01595. Members are the Csh2 protein of the Hmari subtype of CRISPR/cas system. CRISPR stands for Clustered Regularly Interspaced Short Palindromic Repeats. The related model is TIGR02589, the Csd3 protein of the Dvulg CRISPR subtype.	1.61693e-57
NZ_AP014633.1\|WP_045472594.1\|662571_662775_+\|type-II-toxin-antitoxin-system-HicB-family-antitoxin	gnl\|CDD\|224514	COG1598, COG1598, Predicted nuclease of the RNAse H fold, HicB family [General function prediction only].	4.96108e-12
NZ_AP014633.1\|WP_045472567.1\|648794_649010_+\|type-II-toxin-antitoxin-system-HicB-family-antitoxin	gnl\|CDD\|224514	COG1598, COG1598, Predicted nuclease of the RNAse H fold, HicB family [General function prediction only].	6.05148e-15
NZ_AP014633.1\|WP_045472561.1\|646023_648054_-\|chemotaxis-protein-CheA	gnl\|CDD\|223716	COG0643, CheA, Chemotaxis protein histidine kinase and related kinases [Cell motility and secretion / Signal transduction mechanisms].	4.61654e-148
NZ_AP014633.1\|WP_045478764.1\|660466_661045_-\|CRISPR-associated-protein-Cas4	gnl\|CDD\|273040	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4. This model represents a family of proteins associated with CRISPR repeats in a wide set of prokaryotic genomes. This scope of this model has been broadened since it was first built to describe an archaeal subset only. The function of the protein is undefined. Distantly related proteins, excluded from this model, include ORFs from Mycobacteriophage D29 and Sulfolobus islandicus filamentous virus and a region of the Schizosaccharomyces pombe DNA replication helicase Dna2p.	1.20943e-27
NZ_AP014633.1\|WP_045472588.1\|661074_661380_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	6.75517e-22
NZ_AP014633.1\|WP_045472576.1\|650369_650615_-\|hypothetical-protein	gnl\|CDD\|225489	COG2938, COG2938, Uncharacterized conserved protein [Function unknown].	1.9851e-17
NZ_AP014633.1\|WP_045472573.1\|649395_650301_+\|acetylglutamate-kinase	gnl\|CDD\|234869	PRK00942, PRK00942, acetylglutamate kinase; Provisional.	5.19605e-160
NZ_AP014633.1\|WP_045472578.1\|650629_653638_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|380640	cd19985, PBP1_ABC_HAAT-like, type 1 periplasmic ligand-binding domain of uncharacterized ABC (Atpase Binding Cassette)-type active transport systems predicted to be involved in uptake of hydrophobic amino acids or peptides. This subgroup includes the type 1 periplasmic ligand-binding domain of uncharacterized ABC (Atpase Binding Cassette)-type active transport systems that are predicted to be involved in the uptake of hydrophobic amino acids or peptides. This subgroup has high sequence similarity to members of the family of hydrophobic amino acid transporters (HAAT), such as leucine-isoleucine-valine binding protein (LIVBP); however, its ligand specificity has not been determined experimentally.	8.72963e-140
NZ_AP014633.1\|WP_045472606.1\|666395_666650_-\|type-II-toxin-antitoxin-system-prevent-host-death-family-antitoxin	gnl\|CDD\|171099	PRK11409, PRK11409, YoeB-YefM toxin-antitoxin system antitoxin YefM.	8.22894e-20
NZ_AP014633.1\|WP_045472585.1\|655733_656300_+\|CDP-diacylglycerol--glycerol-3-phosphate-3-phosphatidyltransferase	gnl\|CDD\|182763	PRK10832, PRK10832, CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase.	8.18542e-71
NZ_AP014633.1\|WP_045472597.1\|662851_663535_-\|hypothetical-protein	gnl\|CDD\|379957	pfam17262, DUF5328, Family of unknown function (DUF5328). This family of unknown function can be found in Bacteria and Archaea. Some of the proteins in this family are annotated in UniProt as putative DNA repair proteins.	6.1554e-48
NZ_AP014633.1\|WP_045472591.1\|661376_662354_-\|CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	4.70418e-83
NZ_AP014633.1\|WP_045472558.1\|645515_646004_-\|chemotaxis-protein	gnl\|CDD\|238374	cd00732, CheW, CheW, a small regulator protein, unique to the chemotaxis signalling in prokaryotes and archea. CheW interacts with the histidine kinase CheA, most likely with the related regulatory domain of CheA. CheW is proposed to form signalling arrays together with CheA and the methyl-accepting chemotaxis proteins (MCPs), which are involved in response modulation.	1.89558e-36
NZ_AP014633.1\|WP_083942430.1\|663522_665973_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	2.86674e-46
NZ_AP014633.1\|WP_045472570.1\|649006_649231_+\|type-II-toxin-antitoxin-system-HicA-family-toxin	gnl\|CDD\|224638	COG1724, COG1724, Predicted RNA binding protein (dsRBD-like fold), HicA family [General function prediction only].	1.51317e-20
NZ_AP014633.1\|WP_045472581.1\|653910_655743_+\|excinuclease-ABC-subunit-UvrC	gnl\|CDD\|234792	PRK00558, uvrC, excinuclease ABC subunit UvrC.	0
NZ_AP014633.1\|WP_045472564.1\|648168_648537_-\|response-regulator	gnl\|CDD\|381110	cd17562, REC_CheY4-like, phosphoacceptor receiver (REC) domain of chemotaxis response regulator CheY4 and similar CheY family proteins. CheY family chemotaxis response regulators (RRs) comprise about 17% of bacterial RRs and almost half of all RRs in archaea. This subfamily contains Vibrio cholerae CheY4 and similar CheY family RRs. CheY proteins control bacterial motility and participate in signaling phosphorelays and in protein-protein interactions. CheY RRs contain only the REC domain with no output/effector domain. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	2.4063e-32
NZ_AP014633.1\|WP_045472603.1\|666135_666399_-\|Txe/YoeB-family-addiction-module-toxin	gnl\|CDD\|284238	pfam06769, YoeB_toxin, YoeB-like toxin of bacterial type II toxin-antitoxin system. YoeB_toxin is a family of bacterial toxins that forms one component of the type II toxin-antitoxin system in E. coli whose antitoxin is represented by YefM, found in pfam02604. The plasmid encoded Axe-Txe proteins in Enterococcus faecium act as an antitoxin-toxin pair. When the plasmid is lost, the antitoxin is degraded relatively quickly by host enzymes. This allows the toxin to interact with its intracellular target, thus killing the cell or impeding cell growth. These toxins are highly potent protein synthesis inhibitors, specifically blocking the initiation of translation. In the case of YoeB, it binds to the 50 S ribosomal subunit in 70 S ribosomes and interacts with the A site leading to mRNA cleavage at this site. As a result, the 3'-end portion of the mRNA is released from ribosomes, and translation initiation is effectively inhibited.	1.21107e-44
NZ_AP014633.1\|WP_052491685.1\|666718_667468_-\|CRISPR-associated-protein-Cas5	gnl\|CDD\|131641	TIGR02592, hypothetical_protein_CTC_01466, CRISPR-associated protein Cas5, subtype I-B/HMARI. This is a CRISPR-associated protein unique to the hmari subtype of cas genes and CRISPR repeat, which is the only subtype present in Haloarcula marismortui ATCC 43049. The hmari type, though uncommon, is also found in the Aquificae, Thermotogae, Firmicutes, and Dictyoglomi.	6.72557e-22

>NZ_AP014633.1|WP_045472585.1|655733_656300_+|CDP-diacylglycerol--glycerol-3-phosphate-3-phosphatidyltransferase
MHVNIPIFLTLLRIILIPVFVALFYLPWKGANELMTLIFALAALTDWFDGYLARRWNQTSAFGAFLDPVADKLMVAVALVLLVQAHPTPWMAIPAAVIIGREITISALREWMAEIGQRAQVAVSKIGKIKTTAQMAALLMLLYREPFMGLPIYPIGIILLYIAAVLTLWSMMLYLRAALPIIFNNNRI
>NZ_AP014633.1|WP_045472581.1|653910_655743_+|excinuclease-ABC-subunit-UvrC
MTASLASFDHQSFLAHLPHKPGVYCMLDQIGTLLYVGKAKDLKKRLASYFRLSLSSAKTQALVAQIDQIEVTVTSTEKEALILENTLIKAHQPHYNILLRDDKSYPFIYLSKHPFPRLSWHRGTQRAKGHYFGPYPHRHAVHETLNLLQKLFLLRSCRDNYYQNRSRPCLQYQIKRCSAPCVGLIEPAIYGEAVQNVIRFLKGKSQTIVTDLVEKMQLAAHSLEFEQAAKYRDQIQQLRQIQQQQCIITDEGHIDIVAGVIENKLACIQILTIRHGQSVGNQAFFPHIPSGDIEITSVAQILTAFLPQYYLQVQEIPDEIVLNNPITNMNLLAQVIGEQHGKPIDIHSRVRGMRARWLAMTLENARTYLRQHQPQQYRERLAALSKILHWEILPQRLECFDVSHSQGEATVAACVVFDAHGPCYKAYRRFNINNVTPGDDYAAMQQVLTRRYRALLLQPTLLPDIIFIDGGTGQVKIAQQVLAELQLNDILIIGIAKGIQRTPGLERLILPQEKTPLRLPKDSPALHLIQFIRDEAHRFAITAHRQRRAKIRRTSVLETIAGIGPKRRQRLLNYFGGLAGISQATVEDLMAVPGIDQSLAQKIYQLFKST
>NZ_AP014633.1|WP_045472578.1|650629_653638_-|ABC-transporter-substrate-binding-protein
MRIGYRFALIAIILLFVIVSYYSKQQEVIHIAFVGPLSGKDTAAGKAMTQAIQLYLDTVNQTGGIQGKKIVLDRFDDRNDVNQAQAKAMEIAKQNRAVAVIGHWYSSSSISAGEIYKKQGIPAIAPGSTNIKVTENNEWYFRNIFSSKSSGRFLANYVKQVFQQTTVSIIHEDDAYGAYLAEVFGQETNKLGMTVKYQWHFKIDDPQLETSLEQIVKQLATKNDAGVILLAVKALEGVKLVKLIKDAGIKNTMISESSLSEQTFLQGFDNFPKERSSPGYYTNDIYVATPLIFDTANDKAQQFREVYQARYREEPDWSAAYAYDTAMLLVEAITHTQIQGQPQTLTADRQQIRDYLASLTTIHKAIEGVTGFNYFDEDRNSQKPVVIGVYKNKNLISAFTQLQMIPNLNAIADLEEALHQERILLVDNKYMYKTNVVYTGIEINEISDLDIKNLTCQLDFYLWFRFREEIDPKNIKFLNEVEPIVLTEPQVTEKWGAMTYHMYHVKGRFRIDFLPQHYAFKQHNLGVSFRHRELNSNNLIYVTDVLGMGLTDQAAWLKRLESYQVLNPALGWSMQNIRFFQDFIYKSALGSLKYLNQQDGMMKYSRFNAALLIKADEFALRGMIPTEWASPLIIFSILMLLFLILLETKKTLIYLPRFILGNTKRVRLLPSLYKIWRDNSSHFSISYVIWLLQASCAAILLLSSEVLLVERVAKGTLYKPDLVITFFDILWWLVPTLFISMAIKRFIWYPLEKRSRRAIPNVIRIFVTFVIYLLAFFGIIAFVYEQTLTSLLATSGMVAMIIGLAIQVNLSNIFSGVAINLERPFRVGDWVKIGDFDEGIVVDVNWRTTRVKVRNGYILSIPNSTAAESDIHNYNYTDGHYWLWPTVYVDPHHSPAFVEKILLEAIQSVETGVMKKPKPYILFAGVNEWAASYWIVFCLENYQNKYDILNEVWRKVWQQMQQAGIMFAIHRQEIYMFQGVKERRPTTIPNEWPILKTPNPDK
>NZ_AP014633.1|WP_045472576.1|650369_650615_-|hypothetical-protein
MKDFDLLKWRCRRGMKELEVILIRYLEQHYTQASAMEQQAFARLLELADIELYAYLVGQQSPAAEEVLALVKKIRQLQPAG
>NZ_AP014633.1|WP_045472573.1|649395_650301_+|acetylglutamate-kinase
MTLTTSSANNIAHVLIEALPYINRFSGKTVVIKYGGHAMVDETLKNSFARDIVLMKRVGINPVVVHGGGPQISQLLNRLGKASEFFQGMRITDRETMDVVQMVLGGLVNKDIVTLINRQGGAAVGLTGKDAELIHARKLTFTRDNPEMTVPEIIDIGHVGEVASFDTAVIDLLIQGNFIPVIAPIGVGDDGQSYNINADLVAGKLAQVLQAEKLLLLTNTAGVLSKEGHLLTGLDPTWVQDLIDDGIIHGGMLPKVHCALEAVQGGVKTAHIIDGRVEHAVLLEILTDKGVGTLIKGRRGH
>NZ_AP014633.1|WP_045472570.1|649006_649231_+|type-II-toxin-antitoxin-system-HicA-family-toxin
MTKLPNLTGKRVIVALNKAGFTVIRIRGSHHILKHQDGRSTVVPVHFGEDIGPGLLGKILRDCEITKDELISLL
>NZ_AP014633.1|WP_045472567.1|648794_649010_+|type-II-toxin-antitoxin-system-HicB-family-antitoxin
MQREFNVVIERDIEGYWIASVPALHGCHTQSRSLDELMQRIEEAILLCLEVAEEDIESNEFIGIQKISVET
>NZ_AP014633.1|WP_045472564.1|648168_648537_-|response-regulator
MKHVLIVDDSLTMRRMVKISLRTVKELAFEEANNGLEALERLALTSVDLMILDLNMPDMHGIEVLRFVRGHQTFNYIPVIVLTTRGDESSRHDTLKAGASRYLTKPFEPKLLAQQVQELLYS
>NZ_AP014633.1|WP_045472561.1|646023_648054_-|chemotaxis-protein-CheA
MSSEDFCQEPFINEFIDDLYAECDERLSLVRRDLLALESFIQQPTLDHTLLDALLRNLHTIKGLCGTINLKVAEQLAHQLENYLRTLRQGQIKLSHEGLETLFAGAQLLEQSIIAHRADSSLPDITAVSTALVSVVGGTVSTTPTSTSALSSPHEPEQPRIWRFEFIPTPTLAERGINVNQIRSRLEGIGKITQATPRPTTQGGGLAFEFLVATSAAEACFAPWQADGLTYTLPKPPPSLPETSPSPPATPPSLQPAEPPLANHGESPPLPVATRLPALTPSNMVRVDMARIDELMRLIGELVTTRARQDNHLKQLRASLPLAQWRILQETNLALERHLRTLREAVMRVRLVPIGSAFERMQFVIRDLMHQTHKAVKLELTGKETEIDKMMVDKMIDPLLHLVRNAVSHGIESPTKRLAQGKPSEGMIALRAYNTGDMMTIEIEDDGQGIDLNKVAQHARTQGLLAADTVLDPANLLELLCQPGFTTKTQADLASGRGVGMDVVRNAVTELGGAISLETQVGKGTRFTIQLPLTLSIADAMIISVSGQLFAVPQVAVHEVARLNPVAITVLENNELLLHPRGILPILHLNRLFHLTEPKIDQTSYVLIVGGASAATAIAMIVDRILSQQEIVVRTLTDPLAQVPGIVGASELGDGKIVLILDVATLTRMAYQTRLN
>NZ_AP014633.1|WP_045472558.1|645515_646004_-|chemotaxis-protein
MTDNGKIAEPFILFAIGKATYGVHSRLVQQMEMIEEITPLPNAPPFVEGIVLSRGQVIPAINLRARFGFEKISHDTRTRLIVVNIKERTIGFVVDTAREFVSIPTEAIQPPPEKMSGLSGKYIEGIAKLKERLILILNIEEILETTDMVNVSPQSSHQANSD
>NZ_AP014633.1|WP_045478764.1|660466_661045_-|CRISPR-associated-protein-Cas4
MLTPTEVLEHIWCPRFTWFMNVQHIPQHEESRYKVLKGREIHARRETENKTYLRRKIGVIDKQIGVYLASPQLRLRGIVDEVLWLRDGSLAPLDYKYTVPNERDIVFKTHQIQIRIYALLVEVVYGKKVNKGFVAYIRGKYKLYEVPVNSEHQEEIQLILDEIFATIQSERLPKRTTQKTHCIDCCYRNICV
>NZ_AP014633.1|WP_045472588.1|661074_661380_-|CRISPR-associated-endonuclease-Cas2
MKSTETLVWIIYDVTIDKARGRIAKLCKEAGLYRVQKSVFLGTIERNRLDELTLQFEDLIDEQTDSVYVFPLCQADFKKVQTLGQAFDEKLVTDEVKALFL
>NZ_AP014633.1|WP_045472591.1|661376_662354_-|CRISPR-associated-endonuclease-Cas1
MDLILTTFGTYLHRSGELFLIKIDNTTQEISSRKVRSILITIGASLSTDAIELAIEKNIDLIFLDKFGDPYGRIWHGKLGSTTAIRRQQLRIADTEAGFQLALAWMVRKIDNQLDYLDSARQKRTRLSSSLTESIEKLTESRNKIAALSGTLAEMRSTIFQLEMKAAKLYWQTINLLLPESYRFEQRSRRPAQDEFNCLLNYAYGVLYGVVERSCVLAGLDPYVGFIHTDDYNKQSFVFDLIECYRIWADESVVNLFANRQIKQNLFDKLHNGLTLNQDGKAVLLNSLVNFLDEKIHYNRRQVQRREIVQLDCHHIANQLIDKNQ
>NZ_AP014633.1|WP_045472594.1|662571_662775_+|type-II-toxin-antitoxin-system-HicB-family-antitoxin
MKIKVIIHEASEGGYWAEVPAIPGCATQGDNFEELLKNLYEAIEGCLSVDIKSIEMTATDRILDIAV
>NZ_AP014633.1|WP_045472597.1|662851_663535_-|hypothetical-protein
MYLLTKIPLTTVELRWHSPLLGLGSLRARQLRGAIAQAFPEDSRFHQHDAQGQLLYRYPLIQYRWREGYGLITGWHQVAEMLLNVSWLDLPLQLGEDSVLVTEAVINTQAAQFGISEYLLHYCFFTPVLLFNQDNYKKYKQLNTHAQRYESDRLLRAQLLVALRGVGVEFNTQLYAAFARVETVNCRYKNQTMMGLTGGFVTNALLPEGFSMGHAVSHGYGWITRFL
>NZ_AP014633.1|WP_083942430.1|663522_665973_-|CRISPR-associated-helicase/endonuclease-Cas3
MAVSKSGAWNAPLEAEIDRCRRQHRHSSKKIKKRRNHFMTLQSHHDPHKTLREHLQEVQQATHFILSCHSVNFPQTIINAIVQCHDLGKGSPAFQTYIQNPAAYNKNQADPRAKSHAFLSAVLATLWAQQEQWPAFDTLILTQAVACHHAGFKNLDELEIALELDIDDPLAAQYTALDLSLLSEISGLNLQNIDQANFEAAKWWLFKQQKIKKQLTHLALESALSLRLWAQFCLSVLLEADKAFLALHEEGAAPYLQKTAPEIPPAWIDNYLTQTTHSTPFDAFRATLQAQVILNSQVMTEKCFTLTLPTGAGKTLIAARWALALRQQLSLPKGFKPKIIVVLPYLSIIDQVEKIYQQVLGITTEEAHTDLKMASHSLADRNYELEGKALSDSYAEFFLNTWRSEVVITTFDQLLLTFFSEQNKHLMRFHNLMDAIIILDEVQTLPPRLWDIINQTLQVLAKVGQSRILMMSATQPQFLTPAQELVGTPEQVTAIFNQCQRYQIHLQHHLEQPLTGFIDSLITRVKTWLAHEQRVMITLNTRASAKRVWQALQTELALQVPIYLVSADVTPRDRLEKISNILNNQPCLVVSTQTVEAGIDIDMDVIIRDFAPLDKLIQVAGRCNRHNHRGKHGGYVEIVRLLSFNGQKYANYIYDPVLLNTTFEILENYQTIGEESVLTLSEHYFQLLHRKMNTGKELTKQYAYWQALEKSIHTLLRPQGEQISFTVLDDQKGEILRSQIKSALEIKGRWARRQALQKLAGGISERSVNVYQRRGFHPEDYADLLGYLWILKAGFYTSAAGLDLKLIEDDPAACIF
>NZ_AP014633.1|WP_045472603.1|666135_666399_-|Txe/YoeB-family-addiction-module-toxin
MNILFTNESWEDYLYWQQTDKRILHKINKLIHEIKRTPFEGIGKPEPLRYQLQGCWSRRINDEHRLVYEVVEDTVRIITCRYHYQLR
>NZ_AP014633.1|WP_045472606.1|666395_666650_-|type-II-toxin-antitoxin-system-prevent-host-death-family-antitoxin
MQIILFDDAKQNLETICEQVCQDHEPYVVKGKNDQDVVILSLEDYNAWVETNYLLSNPYNAKRLLTSLEKARQGQLLKRELIEE
>NZ_AP014633.1|WP_052491685.1|666718_667468_-|CRISPR-associated-protein-Cas5
MQVLSLRWFAKYGHFLRAEANVSALSYPIPPRTAVLGLFGAILGLEKDRLPEILGNAQVAIGGTLPSCFWHQIKLRKDPPTALPLTIKKGQKGNKGSDEQATLVLQEWLWQPNFLIHVAMSDNQAIFTELYERIAQRRWYFTPCMGLSELLAEVELIGIAAAKPVPAGKVKITTIFPQSAGRVLNSEEKLGIHLLRMPREVNTDRIFSHQNYYIEHQGQAFTVETEQAWSLDEIIKTKTKHEIGNIVFS
>NZ_AP014633.1|WP_045472612.1|667480_668434_-|type-I-B-CRISPR-associated-protein-Cas7/Csh2
MAKNLLKSRREILFLYDIRMGNPNGDPDENRPRRLPDGRFYVTDVRLKRFVRDYVASHGYDILVTNIEGKTTNLTGRVVNYLNKENKPQADGQELVDILLDTFIDARWFGSSLAFKKGEGSKNRDWSPIPKTLTGATQFNMGEVLNQTEEIQVNGTTIFSSDEKKGAGTFTEINVLRYGLIAFSGITNEHSAQRSRMSEEDYEILLKALWNGVRSAANTRSKVGQVPRLLVSIEYQAGEEFQLGNLMDYVQLHPAKGKEEIHWASPTDYLLDLSRLLDRLAGQHKRIAQIRYEQSPDLQLQVAIPKQWQLLHFDTPA

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Crispr_ID: NZ_AP014633_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP014633_4

670837-672280

TypeI-B

Consensus_repeat	Method
GTTTCAATCCTTGTTGTACTGGATATCGCTCAAGAGC	PILER-CR
GCTCTTGAGCTATATCCAGTACAACAAGGATTGAAAC	CRISPRCasFinder
GCTCTTGAGCGATATCCAGTACAACAAGGATTGAAAC	CRT

19 spacers

cas8b1,cas7,cas5,cas3,cas6,cas1,cas2

The CRISPR arrays of NZ_AP014633_4

>merge|NZ_AP014633|4|670837-672280|PILER-CR,CRISPRCasFinder,CRT
GCTCTTGAGCGATATCCAGTACAACAAGGATTGAAACTTGTTAATTTCCCGCAATAAACACTATTTTCGGAGCTCTTGAGCGATATCCAGTACAACAAGGATTGAAACGCAGATAGTTTGGCTGTATTTCAATCATCTTTAGCGCTCTTGAGCGATATCCAGTACAACAAGGATTGAAACGGAAACACCTGACTACACATACATGATGGGTACATTGGCTCTTGAGCGATATCCAGTACAACAAGGATTGAAACCTAAACACATAACTCCACGAACCTAGGTTAGAGTCTATAGCTCTTGAGCGATATCCAGTACAACAAGGATTGAAACGTGACATGGAAATTAATTTGCCAATTTTTAGAAATGCTCTTGAGCGATATCCAGTACAACAAGGATTGAAACGTATCTAAGTAAGAACGACCATTCTTATTGTATTGGGGCTCTTGAGCGATATCCAGTACAACAAGGATTGAAACAATCGTTGGATAATCAGAATATACTTCCCCAGTTTTTTGCTCTTGAGCGATATCCAGTACAACAAGGATTGAAACTTGAACATAACCCTTCGCAGTCTTAGAAAAATCTATTTTGCTCTTGAGCGATATCCAGTACAACAAGGATTGAAACTTTACCGCCTGGAATAAAATGGATCCGGTCGATGATTGGCTCTTGAGCGATATCCAGTACAACAAGGATTGAAACCAACTAAGGTGCAAAATTTCCCAATGAGATCTTTCGTGCTCTTGAGCGATATCCAGTACAACAAGGATTGAAACAAAAAATGACAGGGTACCACCACATCAATATCTAATCGCTCTTGAGCGATATCCAGTACAACAAGGATTGAAACACAGGTAAAACCAACTTTGCAGAAAATGGATCCTCCGTGCTCTTGAGCGATATCCAGTACAACAAGGATTGAAACACCATAAAAGGCTGCAATACGCATGGCATCGGTGATAGCTCTTGAGCGATATCCAGTACAACAAGGATTGAAACATTAATATCCAAAGTACAACCGGAACTGGTGATTGCTCTTGAGCTATATCCAGTACAACAAGGATTGAAACCTAATTCGGGCGCGGGGAAATTCTCAAAAGGGGATTTAGCTCTTGAGCTATATCCAGTACAACAAGGATTGAAACGTTGATCCGAACACTCGTTCAATGGCGGCGTTGACTTTGCTCTTGAGCTATATCCAGTACAACAAGGATTGAAACCAGTTGTGGTGTGACTCCTCGTAAGAACGCAAAACGAGGCTCTTGAGCTATATCCAGTACAACAAGGATTGAAACTCCTTTAAGCTCTCTTCAAAAAGTGCAAATGCCTTCCTGCTCTTGAGCTATATCCAGTACAACAAGGATTGAAACAAATGGTAGGAATAACAGGAGAAAAAACAACATCATGGCTCTTGAGAGTGACGAAGATTAGCTTGGTTATCAAC

>NZ_AP014633|4|4|670837-672206|PILER-CR
GCTCTTGAGCGATATCCAGTACAACAAGGATTGAAAC	TTGTTAATTTCCCGCAATAAACACTATTTTCGGA
GCTCTTGAGCGATATCCAGTACAACAAGGATTGAAAC	GCAGATAGTTTGGCTGTATTTCAATCATCTTTAGC
GCTCTTGAGCGATATCCAGTACAACAAGGATTGAAAC	GGAAACACCTGACTACACATACATGATGGGTACATTG
GCTCTTGAGCGATATCCAGTACAACAAGGATTGAAAC	CTAAACACATAACTCCACGAACCTAGGTTAGAGTCTATA
GCTCTTGAGCGATATCCAGTACAACAAGGATTGAAAC	GTGACATGGAAATTAATTTGCCAATTTTTAGAAAT
GCTCTTGAGCGATATCCAGTACAACAAGGATTGAAAC	GTATCTAAGTAAGAACGACCATTCTTATTGTATTGGG
GCTCTTGAGCGATATCCAGTACAACAAGGATTGAAAC	AATCGTTGGATAATCAGAATATACTTCCCCAGTTTTTT
GCTCTTGAGCGATATCCAGTACAACAAGGATTGAAAC	TTGAACATAACCCTTCGCAGTCTTAGAAAAATCTATTTT
GCTCTTGAGCGATATCCAGTACAACAAGGATTGAAAC	TTTACCGCCTGGAATAAAATGGATCCGGTCGATGATTG
GCTCTTGAGCGATATCCAGTACAACAAGGATTGAAAC	CAACTAAGGTGCAAAATTTCCCAATGAGATCTTTCGT
GCTCTTGAGCGATATCCAGTACAACAAGGATTGAAAC	AAAAAATGACAGGGTACCACCACATCAATATCTAATC
GCTCTTGAGCGATATCCAGTACAACAAGGATTGAAAC	ACAGGTAAAACCAACTTTGCAGAAAATGGATCCTCCGT
GCTCTTGAGCGATATCCAGTACAACAAGGATTGAAAC	ACCATAAAAGGCTGCAATACGCATGGCATCGGTGATA
GCTCTTGAGCGATATCCAGTACAACAAGGATTGAAAC	ATTAATATCCAAAGTACAACCGGAACTGGTGATT
GCTCTTGAGCTATATCCAGTACAACAAGGATTGAAAC	CTAATTCGGGCGCGGGGAAATTCTCAAAAGGGGATTTA
GCTCTTGAGCTATATCCAGTACAACAAGGATTGAAAC	GTTGATCCGAACACTCGTTCAATGGCGGCGTTGACTTT
GCTCTTGAGCTATATCCAGTACAACAAGGATTGAAAC	CAGTTGTGGTGTGACTCCTCGTAAGAACGCAAAACGAG
GCTCTTGAGCTATATCCAGTACAACAAGGATTGAAAC	TCCTTTAAGCTCTCTTCAAAAAGTGCAAATGCCTTCCT
GCTCTTGAGCTATATCCAGTACAACAAGGATTGAAAC

>NZ_AP014633|4|4|670837-672206|CRISPRCasFinder
GCTCTTGAGCGATATCCAGTACAACAAGGATTGAAAC	TTGTTAATTTCCCGCAATAAACACTATTTTCGGA
GCTCTTGAGCGATATCCAGTACAACAAGGATTGAAAC	GCAGATAGTTTGGCTGTATTTCAATCATCTTTAGC
GCTCTTGAGCGATATCCAGTACAACAAGGATTGAAAC	GGAAACACCTGACTACACATACATGATGGGTACATTG
GCTCTTGAGCGATATCCAGTACAACAAGGATTGAAAC	CTAAACACATAACTCCACGAACCTAGGTTAGAGTCTATA
GCTCTTGAGCGATATCCAGTACAACAAGGATTGAAAC	GTGACATGGAAATTAATTTGCCAATTTTTAGAAAT
GCTCTTGAGCGATATCCAGTACAACAAGGATTGAAAC	GTATCTAAGTAAGAACGACCATTCTTATTGTATTGGG
GCTCTTGAGCGATATCCAGTACAACAAGGATTGAAAC	AATCGTTGGATAATCAGAATATACTTCCCCAGTTTTTT
GCTCTTGAGCGATATCCAGTACAACAAGGATTGAAAC	TTGAACATAACCCTTCGCAGTCTTAGAAAAATCTATTTT
GCTCTTGAGCGATATCCAGTACAACAAGGATTGAAAC	TTTACCGCCTGGAATAAAATGGATCCGGTCGATGATTG
GCTCTTGAGCGATATCCAGTACAACAAGGATTGAAAC	CAACTAAGGTGCAAAATTTCCCAATGAGATCTTTCGT
GCTCTTGAGCGATATCCAGTACAACAAGGATTGAAAC	AAAAAATGACAGGGTACCACCACATCAATATCTAATC
GCTCTTGAGCGATATCCAGTACAACAAGGATTGAAAC	ACAGGTAAAACCAACTTTGCAGAAAATGGATCCTCCGT
GCTCTTGAGCGATATCCAGTACAACAAGGATTGAAAC	ACCATAAAAGGCTGCAATACGCATGGCATCGGTGATA
GCTCTTGAGCGATATCCAGTACAACAAGGATTGAAAC	ATTAATATCCAAAGTACAACCGGAACTGGTGATT
GCTCTTGAGCTATATCCAGTACAACAAGGATTGAAAC	CTAATTCGGGCGCGGGGAAATTCTCAAAAGGGGATTTA
GCTCTTGAGCTATATCCAGTACAACAAGGATTGAAAC	GTTGATCCGAACACTCGTTCAATGGCGGCGTTGACTTT
GCTCTTGAGCTATATCCAGTACAACAAGGATTGAAAC	CAGTTGTGGTGTGACTCCTCGTAAGAACGCAAAACGAG
GCTCTTGAGCTATATCCAGTACAACAAGGATTGAAAC	TCCTTTAAGCTCTCTTCAAAAAGTGCAAATGCCTTCCT
GCTCTTGAGCTATATCCAGTACAACAAGGATTGAAAC

>NZ_AP014633|4|2|670837-672280|CRT
GCTCTTGAGCGATATCCAGTACAACAAGGATTGAAAC	TTGTTAATTTCCCGCAATAAACACTATTTTCGGA
GCTCTTGAGCGATATCCAGTACAACAAGGATTGAAAC	GCAGATAGTTTGGCTGTATTTCAATCATCTTTAGC
GCTCTTGAGCGATATCCAGTACAACAAGGATTGAAAC	GGAAACACCTGACTACACATACATGATGGGTACATTG
GCTCTTGAGCGATATCCAGTACAACAAGGATTGAAAC	CTAAACACATAACTCCACGAACCTAGGTTAGAGTCTATA
GCTCTTGAGCGATATCCAGTACAACAAGGATTGAAAC	GTGACATGGAAATTAATTTGCCAATTTTTAGAAAT
GCTCTTGAGCGATATCCAGTACAACAAGGATTGAAAC	GTATCTAAGTAAGAACGACCATTCTTATTGTATTGGG
GCTCTTGAGCGATATCCAGTACAACAAGGATTGAAAC	AATCGTTGGATAATCAGAATATACTTCCCCAGTTTTTT
GCTCTTGAGCGATATCCAGTACAACAAGGATTGAAAC	TTGAACATAACCCTTCGCAGTCTTAGAAAAATCTATTTT
GCTCTTGAGCGATATCCAGTACAACAAGGATTGAAAC	TTTACCGCCTGGAATAAAATGGATCCGGTCGATGATTG
GCTCTTGAGCGATATCCAGTACAACAAGGATTGAAAC	CAACTAAGGTGCAAAATTTCCCAATGAGATCTTTCGT
GCTCTTGAGCGATATCCAGTACAACAAGGATTGAAAC	AAAAAATGACAGGGTACCACCACATCAATATCTAATC
GCTCTTGAGCGATATCCAGTACAACAAGGATTGAAAC	ACAGGTAAAACCAACTTTGCAGAAAATGGATCCTCCGT
GCTCTTGAGCGATATCCAGTACAACAAGGATTGAAAC	ACCATAAAAGGCTGCAATACGCATGGCATCGGTGATA
GCTCTTGAGCGATATCCAGTACAACAAGGATTGAAAC	ATTAATATCCAAAGTACAACCGGAACTGGTGATT
GCTCTTGAGCTATATCCAGTACAACAAGGATTGAAAC	CTAATTCGGGCGCGGGGAAATTCTCAAAAGGGGATTTA
GCTCTTGAGCTATATCCAGTACAACAAGGATTGAAAC	GTTGATCCGAACACTCGTTCAATGGCGGCGTTGACTTT
GCTCTTGAGCTATATCCAGTACAACAAGGATTGAAAC	CAGTTGTGGTGTGACTCCTCGTAAGAACGCAAAACGAG
GCTCTTGAGCTATATCCAGTACAACAAGGATTGAAAC	TCCTTTAAGCTCTCTTCAAAAAGTGCAAATGCCTTCCT
GCTCTTGAGCTATATCCAGTACAACAAGGATTGAAAC	AAATGGTAGGAATAACAGGAGAAAAAACAACATCATG
GCTCTTGAGAGTGACGAAGATTAGCTTGGTTATCAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP014633.1\|WP_045472615.1\|672483_673701_-\|beta-ketoacyl-ACP-synthase-I	unknown	unknown	gnl\|CDD\|181184
NZ_AP014633.1\|WP_045472618.1\|673714_674230_-\|3-hydroxyacyl-[acyl-carrier-protein]-dehydratase-FabA	unknown	unknown	gnl\|CDD\|179953
NZ_AP014633.1\|WP_045472588.1\|661074_661380_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_AP014633.1\|WP_045472624.1\|676085_676580_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014633.1\|WP_045472603.1\|666135_666399_-\|Txe/YoeB-family-addiction-module-toxin	unknown	unknown	gnl\|CDD\|284238
NZ_AP014633.1\|WP_045472630.1\|677230_686170_-\|choice-of-anchor-D-domain-containing-protein	unknown	unknown	gnl\|CDD\|380152
NZ_AP014633.1\|WP_045472606.1\|666395_666650_-\|type-II-toxin-antitoxin-system-prevent-host-death-family-antitoxin	unknown	unknown	gnl\|CDD\|171099
NZ_AP014633.1\|WP_045472594.1\|662571_662775_+\|type-II-toxin-antitoxin-system-HicB-family-antitoxin	unknown	unknown	gnl\|CDD\|224514
NZ_AP014633.1\|WP_045472597.1\|662851_663535_-\|hypothetical-protein	cas6	cls000004_cas6_CAS-I:CAS-III	gnl\|CDD\|379957
NZ_AP014633.1\|WP_045472612.1\|667480_668434_-\|type-I-B-CRISPR-associated-protein-Cas7/Csh2	cas7	cd09690_cas7_CAS-I-B	gnl\|CDD\|274217
NZ_AP014633.1\|WP_083942432.1\|687335_688265_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|335993
NZ_AP014633.1\|WP_083942430.1\|663522_665973_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_AP014633.1\|WP_045472639.1\|688516_689413_+\|formylmethanofuran--tetrahydromethanopterin-N-formyltransferase	unknown	unknown	gnl\|CDD\|235003
NZ_AP014633.1\|WP_045472591.1\|661376_662354_-\|CRISPR-associated-endonuclease-Cas1	cas1	pfam01867_cas1_CAS-I:CAS-II:CAS-III	gnl\|CDD\|376633
NZ_AP014633.1\|WP_045472627.1\|676566_677130_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014633.1\|WP_083942431.1\|668426_670466_-\|hypothetical-protein	cas8b1	cd09730_cas8b1_CAS-I-B	gnl\|CDD\|187861
NZ_AP014633.1\|WP_045472643.1\|689409_690234_+\|formylmethanofuran-dehydrogenase-subunit-C	unknown	unknown	gnl\|CDD\|274439
NZ_AP014633.1\|WP_045472621.1\|674396_675818_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274615
NZ_AP014633.1\|WP_052491685.1\|666718_667468_-\|CRISPR-associated-protein-Cas5	cas5	cls001430_cas5_CAS-I-B	gnl\|CDD\|131641
NZ_AP014633.1\|WP_045472633.1\|686839_687310_+\|peptide-methionine-(S)-S-oxide-reductase-MsrA	unknown	unknown	gnl\|CDD\|376578

Protein	Function_ID	Function_description	E-value
NZ_AP014633.1\|WP_045472615.1\|672483_673701_-\|beta-ketoacyl-ACP-synthase-I	gnl\|CDD\|181184	PRK07967, PRK07967, beta-ketoacyl-ACP synthase I.	0
NZ_AP014633.1\|WP_045472618.1\|673714_674230_-\|3-hydroxyacyl-[acyl-carrier-protein]-dehydratase-FabA	gnl\|CDD\|179953	PRK05174, PRK05174, bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase.	1.05636e-124
NZ_AP014633.1\|WP_045472588.1\|661074_661380_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	6.75517e-22
NZ_AP014633.1\|WP_045472603.1\|666135_666399_-\|Txe/YoeB-family-addiction-module-toxin	gnl\|CDD\|284238	pfam06769, YoeB_toxin, YoeB-like toxin of bacterial type II toxin-antitoxin system. YoeB_toxin is a family of bacterial toxins that forms one component of the type II toxin-antitoxin system in E. coli whose antitoxin is represented by YefM, found in pfam02604. The plasmid encoded Axe-Txe proteins in Enterococcus faecium act as an antitoxin-toxin pair. When the plasmid is lost, the antitoxin is degraded relatively quickly by host enzymes. This allows the toxin to interact with its intracellular target, thus killing the cell or impeding cell growth. These toxins are highly potent protein synthesis inhibitors, specifically blocking the initiation of translation. In the case of YoeB, it binds to the 50 S ribosomal subunit in 70 S ribosomes and interacts with the A site leading to mRNA cleavage at this site. As a result, the 3'-end portion of the mRNA is released from ribosomes, and translation initiation is effectively inhibited.	1.21107e-44
NZ_AP014633.1\|WP_045472630.1\|677230_686170_-\|choice-of-anchor-D-domain-containing-protein	gnl\|CDD\|380152	NF012200, choice_anch_D, choice-of-anchor D domain-containing protein. This HMM describes a repeat domain just over 100 amino acids long and usually found in tandem copies. Members appear to be extracellular proteins that have some C-terminal anchoring domain, such as type IX secrection (T9SS) or PEP-CTERM.	0.000391345
NZ_AP014633.1\|WP_045472606.1\|666395_666650_-\|type-II-toxin-antitoxin-system-prevent-host-death-family-antitoxin	gnl\|CDD\|171099	PRK11409, PRK11409, YoeB-YefM toxin-antitoxin system antitoxin YefM.	8.22894e-20
NZ_AP014633.1\|WP_045472594.1\|662571_662775_+\|type-II-toxin-antitoxin-system-HicB-family-antitoxin	gnl\|CDD\|224514	COG1598, COG1598, Predicted nuclease of the RNAse H fold, HicB family [General function prediction only].	4.96108e-12
NZ_AP014633.1\|WP_045472597.1\|662851_663535_-\|hypothetical-protein	gnl\|CDD\|379957	pfam17262, DUF5328, Family of unknown function (DUF5328). This family of unknown function can be found in Bacteria and Archaea. Some of the proteins in this family are annotated in UniProt as putative DNA repair proteins.	6.1554e-48
NZ_AP014633.1\|WP_045472612.1\|667480_668434_-\|type-I-B-CRISPR-associated-protein-Cas7/Csh2	gnl\|CDD\|274217	TIGR02590, hypothetical_protein_MM_0563, CRISPR-associated protein Cas7/Csh2, subtype I-B/HMARI. This model represents one of two closely related CRISPR-associated proteins that belong to the larger family of TIGR01595. Members are the Csh2 protein of the Hmari subtype of CRISPR/cas system. CRISPR stands for Clustered Regularly Interspaced Short Palindromic Repeats. The related model is TIGR02589, the Csd3 protein of the Dvulg CRISPR subtype.	1.61693e-57
NZ_AP014633.1\|WP_083942432.1\|687335_688265_+\|hypothetical-protein	gnl\|CDD\|335993	pfam05036, SPOR, Sporulation related domain. This 70 residue domain is composed of two 35 residue repeats found in proteins involved in sporulation and cell division such as FtsN, DedD, and CwlM. This domain is involved in binding peptidoglycan. Two tandem repeats fold into a pseudo-2-fold symmetric single-domain structure containing numerous contacts between the repeats. FtsN is an essential cell division protein with a simple bitopic topology, a short N-terminal cytoplasmic segment fused to a large carboxy periplasmic domain through a single transmembrane domain. These repeats lay at the periplasmic C-terminus. FtsN localizes to the septum ring complex.	0.000904592
NZ_AP014633.1\|WP_083942430.1\|663522_665973_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	2.86674e-46
NZ_AP014633.1\|WP_045472639.1\|688516_689413_+\|formylmethanofuran--tetrahydromethanopterin-N-formyltransferase	gnl\|CDD\|235003	PRK02114, PRK02114, formylmethanofuran--tetrahydromethanopterin formyltransferase; Provisional.	5.54526e-165
NZ_AP014633.1\|WP_045472591.1\|661376_662354_-\|CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	4.70418e-83
NZ_AP014633.1\|WP_083942431.1\|668426_670466_-\|hypothetical-protein	gnl\|CDD\|187861	cd09730, Cas8a1_I-A, CRISPR/Cas system-associated protein Cas8a1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins, some contain Zn-finger domain; signature gene for I-A subtype; also known as TM1802 family.	7.30117e-30
NZ_AP014633.1\|WP_045472643.1\|689409_690234_+\|formylmethanofuran-dehydrogenase-subunit-C	gnl\|CDD\|274439	TIGR03122, one_C_dehyd_C, formylmethanofuran dehydrogenase subunit C. Members of this largely archaeal protein family are subunit C of the formylmethanofuran dehydrogenase. Nomenclature in some bacteria may reflect inclusion of the formyltransferase described by TIGR03119 as part of the complex, and therefore call this protein formyltransferase/hydrolase complex Fhc subunit C. Note that this model does not distinguish tungsten (FwdC) from molybdenum-containing (FmdC) forms of this enzyme.	3.56453e-77
NZ_AP014633.1\|WP_045472621.1\|674396_675818_+\|hypothetical-protein	gnl\|CDD\|274615	TIGR03505, FimV_core, FimV N-terminal domain. This region is found at, or about 200 amino acids from, the N-terminus of FimV from Pseudomonas aeruginosa, TspA of Neisseria meningitidis, and related proteins. Disruption of FimV blocks twitching motility from type IV pili; Semmler, et al. suggest a role for this family in peptidoglycan layer remodelling required by type IV fimbrial systems. Most but not all members of this protein family have a C-terminal region recognized by TIGR03504. In between is a highly variable, often repeat-filled region rich in the negatively charged amino acids Asp and Glu.	1.63818e-17
NZ_AP014633.1\|WP_052491685.1\|666718_667468_-\|CRISPR-associated-protein-Cas5	gnl\|CDD\|131641	TIGR02592, hypothetical_protein_CTC_01466, CRISPR-associated protein Cas5, subtype I-B/HMARI. This is a CRISPR-associated protein unique to the hmari subtype of cas genes and CRISPR repeat, which is the only subtype present in Haloarcula marismortui ATCC 43049. The hmari type, though uncommon, is also found in the Aquificae, Thermotogae, Firmicutes, and Dictyoglomi.	6.72557e-22
NZ_AP014633.1\|WP_045472633.1\|686839_687310_+\|peptide-methionine-(S)-S-oxide-reductase-MsrA	gnl\|CDD\|376578	pfam01625, PMSR, Peptide methionine sulfoxide reductase. This enzyme repairs damaged proteins. Methionine sulfoxide in proteins is reduced to methionine.	9.64907e-97

>NZ_AP014633.1|WP_083942431.1|668426_670466_-|hypothetical-protein
MSCLWQLSAPREDWMINDMRQLALIKLNYEFHHDEHLDISQLRQQHAKELAQYLVENAEKIPRVYVLSPVLERENTVRLSSLELDEEKRQRLPFVKPSGSQSAAVGPVIKRTFKPQEKPSYGPTAKILNSTLKEFKKLATTPSPWQTYFQEIVTILNSQTLLFEQEHSISAGSNVLTKAVELIDEKETVFLTVATDQNGQEFWPGNRPEYHEYLAHELANIKYVTKDTPLQENGTCSLCGKANTTVYPNAIKGAGLNISNADRAGAFCGLDTKQAWKNYALCLDCADLLFIFKNYVLPDLVSEVAGDKALILPSLIGDIDRNEFIEDWHKYLKRLQDNQDIKQNIEKDILEFFKEQEDSHLLLHIIWATFGQNMENVNHYITDILPSRLYQLSELHSRAKKWQSALFPKIRLEEAKFDLHLNMLWFLLKRPGYGKKVNNANKSKKLKEVRQQLTDKIYHGKALANDDKQNLWNEITITAQWYFTEALQQSQVYGLCHEGYSDKKAKKYWTLAGWIRHLARFFYYLDQTGVLPMSKSDTRTFQPQMAELKPFFIPESGIDSNEKALAFLIGILYGKLLQVQSAREVNVTSSTLPWLKRLQLSGKDLPELYAKICHKFLTYGNPSDKTRQVIKETAQVGTLVGDNIVLDITKTVYFLLLGQALAVEILPSKSKSEFGEVNG
>NZ_AP014633.1|WP_045472612.1|667480_668434_-|type-I-B-CRISPR-associated-protein-Cas7/Csh2
MAKNLLKSRREILFLYDIRMGNPNGDPDENRPRRLPDGRFYVTDVRLKRFVRDYVASHGYDILVTNIEGKTTNLTGRVVNYLNKENKPQADGQELVDILLDTFIDARWFGSSLAFKKGEGSKNRDWSPIPKTLTGATQFNMGEVLNQTEEIQVNGTTIFSSDEKKGAGTFTEINVLRYGLIAFSGITNEHSAQRSRMSEEDYEILLKALWNGVRSAANTRSKVGQVPRLLVSIEYQAGEEFQLGNLMDYVQLHPAKGKEEIHWASPTDYLLDLSRLLDRLAGQHKRIAQIRYEQSPDLQLQVAIPKQWQLLHFDTPA
>NZ_AP014633.1|WP_052491685.1|666718_667468_-|CRISPR-associated-protein-Cas5
MQVLSLRWFAKYGHFLRAEANVSALSYPIPPRTAVLGLFGAILGLEKDRLPEILGNAQVAIGGTLPSCFWHQIKLRKDPPTALPLTIKKGQKGNKGSDEQATLVLQEWLWQPNFLIHVAMSDNQAIFTELYERIAQRRWYFTPCMGLSELLAEVELIGIAAAKPVPAGKVKITTIFPQSAGRVLNSEEKLGIHLLRMPREVNTDRIFSHQNYYIEHQGQAFTVETEQAWSLDEIIKTKTKHEIGNIVFS
>NZ_AP014633.1|WP_045472606.1|666395_666650_-|type-II-toxin-antitoxin-system-prevent-host-death-family-antitoxin
MQIILFDDAKQNLETICEQVCQDHEPYVVKGKNDQDVVILSLEDYNAWVETNYLLSNPYNAKRLLTSLEKARQGQLLKRELIEE
>NZ_AP014633.1|WP_045472603.1|666135_666399_-|Txe/YoeB-family-addiction-module-toxin
MNILFTNESWEDYLYWQQTDKRILHKINKLIHEIKRTPFEGIGKPEPLRYQLQGCWSRRINDEHRLVYEVVEDTVRIITCRYHYQLR
>NZ_AP014633.1|WP_083942430.1|663522_665973_-|CRISPR-associated-helicase/endonuclease-Cas3
MAVSKSGAWNAPLEAEIDRCRRQHRHSSKKIKKRRNHFMTLQSHHDPHKTLREHLQEVQQATHFILSCHSVNFPQTIINAIVQCHDLGKGSPAFQTYIQNPAAYNKNQADPRAKSHAFLSAVLATLWAQQEQWPAFDTLILTQAVACHHAGFKNLDELEIALELDIDDPLAAQYTALDLSLLSEISGLNLQNIDQANFEAAKWWLFKQQKIKKQLTHLALESALSLRLWAQFCLSVLLEADKAFLALHEEGAAPYLQKTAPEIPPAWIDNYLTQTTHSTPFDAFRATLQAQVILNSQVMTEKCFTLTLPTGAGKTLIAARWALALRQQLSLPKGFKPKIIVVLPYLSIIDQVEKIYQQVLGITTEEAHTDLKMASHSLADRNYELEGKALSDSYAEFFLNTWRSEVVITTFDQLLLTFFSEQNKHLMRFHNLMDAIIILDEVQTLPPRLWDIINQTLQVLAKVGQSRILMMSATQPQFLTPAQELVGTPEQVTAIFNQCQRYQIHLQHHLEQPLTGFIDSLITRVKTWLAHEQRVMITLNTRASAKRVWQALQTELALQVPIYLVSADVTPRDRLEKISNILNNQPCLVVSTQTVEAGIDIDMDVIIRDFAPLDKLIQVAGRCNRHNHRGKHGGYVEIVRLLSFNGQKYANYIYDPVLLNTTFEILENYQTIGEESVLTLSEHYFQLLHRKMNTGKELTKQYAYWQALEKSIHTLLRPQGEQISFTVLDDQKGEILRSQIKSALEIKGRWARRQALQKLAGGISERSVNVYQRRGFHPEDYADLLGYLWILKAGFYTSAAGLDLKLIEDDPAACIF
>NZ_AP014633.1|WP_045472597.1|662851_663535_-|hypothetical-protein
MYLLTKIPLTTVELRWHSPLLGLGSLRARQLRGAIAQAFPEDSRFHQHDAQGQLLYRYPLIQYRWREGYGLITGWHQVAEMLLNVSWLDLPLQLGEDSVLVTEAVINTQAAQFGISEYLLHYCFFTPVLLFNQDNYKKYKQLNTHAQRYESDRLLRAQLLVALRGVGVEFNTQLYAAFARVETVNCRYKNQTMMGLTGGFVTNALLPEGFSMGHAVSHGYGWITRFL
>NZ_AP014633.1|WP_045472594.1|662571_662775_+|type-II-toxin-antitoxin-system-HicB-family-antitoxin
MKIKVIIHEASEGGYWAEVPAIPGCATQGDNFEELLKNLYEAIEGCLSVDIKSIEMTATDRILDIAV
>NZ_AP014633.1|WP_045472591.1|661376_662354_-|CRISPR-associated-endonuclease-Cas1
MDLILTTFGTYLHRSGELFLIKIDNTTQEISSRKVRSILITIGASLSTDAIELAIEKNIDLIFLDKFGDPYGRIWHGKLGSTTAIRRQQLRIADTEAGFQLALAWMVRKIDNQLDYLDSARQKRTRLSSSLTESIEKLTESRNKIAALSGTLAEMRSTIFQLEMKAAKLYWQTINLLLPESYRFEQRSRRPAQDEFNCLLNYAYGVLYGVVERSCVLAGLDPYVGFIHTDDYNKQSFVFDLIECYRIWADESVVNLFANRQIKQNLFDKLHNGLTLNQDGKAVLLNSLVNFLDEKIHYNRRQVQRREIVQLDCHHIANQLIDKNQ
>NZ_AP014633.1|WP_045472588.1|661074_661380_-|CRISPR-associated-endonuclease-Cas2
MKSTETLVWIIYDVTIDKARGRIAKLCKEAGLYRVQKSVFLGTIERNRLDELTLQFEDLIDEQTDSVYVFPLCQADFKKVQTLGQAFDEKLVTDEVKALFL
>NZ_AP014633.1|WP_045472615.1|672483_673701_-|beta-ketoacyl-ACP-synthase-I
MKRVVITGLGIVCSIGNNKPEVVDSLRQGRSGIKFHQEYADLGFRSQIHGAIQLDLEALIEKKIRRFMGEAAAFTYIAMREAIADAQLTENEVSHPRTGLITGSGGASPANQVLAVDILRTKGLRKVGPYMVPRTMASTTSACLATPFKIKGLNYSISSACATSAHCIGNAYEQIQMGKQDIVFAGGGEEIHWSLTLLFDAMGALSSKYNASPPTASRPYDANRDGFVISGGGGIVVLEELNHAQARGAKIYAEIVGYGASSDGYDMVQPSGEGAVRCMQQALATVVTPIDYINAHGTSTPIGDIRELEAIKQVFSNQIPPISATKSLTGHALGAAGVNEAIYSLLMMEAGFISASANIIQLDPQAEGIPIVRERQDNVTLNTVMSNSFGFGGTNATLVFQHWQN
>NZ_AP014633.1|WP_045472618.1|673714_674230_-|3-hydroxyacyl-[acyl-carrier-protein]-dehydratase-FabA
MVKKNNYTYEELLQCARGDLFGPGNAQLPLPPMLMFDRIVNINEQGGIANKGYIVAELDIRPDLWFFHCHFQGDPVMPGCLGLDAMWQLIGFFLGWLGGPGRGRALGAGEVKFMGQVTPTTQLVKYHIDMKRVIMRKLVMGIGDAIMEADGKEIYSAKDLRVGLFSSTDKF
>NZ_AP014633.1|WP_045472621.1|674396_675818_+|hypothetical-protein
MQKLALPLSSILVSITLILSLTISPAIKPEELTYGPIQSGDRLWDIATQLRPNPTISRYQVMVALLKANPEAFRIPCNLNSLKIGNRFKVPSLADMQILTPEQALAEFNRQNEEWQLARQQKQKIVCQPTPYDTPIINESKLEKTGLISPLDHDSKITKSITKPVALVTIQPPENKSAPDSQWLAFLPNHWGDKISAWLALVTQEQVLSWLSAPWLLPLLISLFGSGILIAVVKSQWRRYSRSYHRSVTPKAKDRDQLSAEPLLSTLEIQKLHDEVKLTPLPAAPTFQESTVALAENSSPANSSSVDEIKEKLDNVRSYLAEEEQFIQKTLREVIQKGTPEQQIEAKQLYEISKKINYLKKDKKYLPVASQVAPMDNSPYLQQMEQQLTLQKSLPQDPENFFDLIDKIFATLDYELNTQGKLVDAYINRHKPEPVGIDNYQVVKKKEATAFNEGSEEIPLRKPRPVPNPTRHL
>NZ_AP014633.1|WP_045472624.1|676085_676580_+|hypothetical-protein
MIETTEQIDKKVIIQEQYLKRVNAFFTQVKDWLTDTPLETVEIPTRTITDATGTYRVGMMAIVIKDKPEPEDNVASIFPMGATTLLGEGILEIAGAFGEEKLIYFCRNTLQQVEYKLGVFRPIYRGVDSDGWYWLESSMSNRALLITRERFFDLIRMVSFYEFT
>NZ_AP014633.1|WP_045472627.1|676566_677130_+|hypothetical-protein
MNSPNPLEPIFNAFLMTKESNKIVRFILNNAQSYPQLLNKLGKLKNYSNPQQQLDDSREEIEDLFVVNLWATFERWLRNYFQEKGNILNTIVPNSIGTEFYKHFEKEIEFWQPLEMLDIIKNSLFAHSEENKQLVGHAKQILEYRNWIAHGKNPKKLPSISQIAPNATYNTLKILIELIEPSQSHLT
>NZ_AP014633.1|WP_045472630.1|677230_686170_-|choice-of-anchor-D-domain-containing-protein
MHSHKRLSLLIYLLTSLCGLFTLSVSFATSKEFCDTIGGPLSLDETSKEYTLIINDSGIIKDLNLSLNLNEHKHVGGLVVTLKQGANQVTLIDQPGIPSLTPQLPETMKGCSGWHIPLVILDDEATDSIEEDCNDAGDPAYKPNGLYRPNNLLSTFDGQNIQGTWTLSVQDKEPASPNGKIKKWCLSADLVLSGKPNYVSQPAPNETLQFQAIQVDGLPQDTSTTSFQPIRISNPSGNADLKIYFQEITGDKDDFAVEMSPPPAANTLLTTVPAGMSNVITVKCDATTLGERTAILKLATDDPDNLNLEYKLSCTGLGSEYQTIPTFTDNTILFGDIPVMMTTPPVPTAAKIKTFQINNTGNTPLKIENIELTQTDDWLDFAVIEPASFPITLADKASLTVKLQCEPSALGTRQAKLVVTTEFQGLNEYWLQCNGIDVDKSELVATYHSSPLPKDQIEFNAGEDTPAEKTLFITEAGGRDLTISRVELIEEKSDSLANYFSIDKDPSFFPVTIPYNAPDYFPIKITCKPAPKANGDFMPQKVAKLQVFAYEGTFEDELKGKESKQEYHLRCDVQPKLAGYEVTYQSPTNETMFLKPNDTFYVGQSREHKMRSGQWETAERTFVIHNPGEADLRVALDSIDTAVGFTIKNVDTLFQNPIPKNGQLPVTVQCIPRKSWITPATLTLLTLNAFNLPPDKKQPQKFKYKLECFGIADRPAVYNSMPVSPGGKIDFGSVPINTTQPTTLTIVEDGNSLLWVDLAKQPFSGPQASEFQLVNSPLPLFAPESSEGKETTIQVQCQPKDQGERRATLNLITNGWPNDQPPHQDLPSKRIEDSGHWSVQYQLICNGVQPGFPGFASLPPPNSTVEFGKVKIGESSTQLIEIEETGDEDLTIKSAIISGEQKANFSILSPASIPFTIANGGAKQILTVQCQPAAAEQYKAKLELMTNDPNNLTVAYDLTCQGISVAPTPGGDNGLVIQLAGDGSGAVASDPEGIVCNKNNEATCAFSFVPNAVVTLIPKAALGAKFDHWSGDCNEQGQITIAGQQSCTAYFQLLPPTQSLFNLTVSVSGKGKVTSKPMGILCGDGNKVCTFDYEQGTTVTLTTSFDSMAWRFRGWVGCTLGKDNTTQVIMTEDQKCQAIFVPLSPSSPQSSLNCPNTPILYVNQKAGGKNTGLNWNEAFTDLQTALATAISCDGVNQIWVAEGTYKPTTQTDRTATFQLINGIAIYGGFNGTETQLQQRDSASHPTILSGDIGVVGNPNDNSYHVVTGSGTDETALLDGFTITAGQANGSQNCPLGCGGGLFNDQGSPTLQHLMVENNSAYYGGGLSNNTGSHPKVKYSFFKNNTATSGGGMANINSSPAVSHVFFMANTATQVGGGLLNQQNSQPQLAHLNIMNNSAVYGGGMYNDASSPWLSHSIFSQNQASHSGGGLVNKNNNHPWLSQVVFGNNSAVQAGGALWNENSSPLLVHATLSQNEAASGGGIANQASSVQIMNSILWNNKDNTGTTATAQIKDDNNSHTTVTYSIIQGGWLGEGNKNEDPLFAAVENSKTQHIVAKAFHLAAHSPAIDAGNNTNIPQDLADAECKGGDGNTTELVEIDFDGNPRLLDGNNDGITTVDMGAYEVYSSQQQPVTLTIVNTDPSQEGIIKSKQPSIHSNLPGISCGDDCTQEYPYGTEIILMAQDGDHSQFVGWSGDCQGNHNNITLSMTANKTCKALFKTTDSIPVAPTNPDNPKLTDKPVVIPEQQQPTIAGQIQALPPACKEIQGSFINVVCNLGGQTRKEVTIGSEGNISNVELEGTNYSHGWISNAQLAANSSLMGGVLSGVIDNKGTLSHVEFRGVQLTGGLLSGLIINNSPVNGRIENVSLDTDAYLLGGTLVGEINNLGTIRDVSIAADTRISGGTITGSLIGQSAKTSVLENVRVAAGSCLENVKLGQGVQLEKNVITTGHCPQPNLGNTLITKVIPAAGQTFKDAVIGTEGQLIRAVLQGTTRSLGTVADAILAPYSALIGGILQGQIINEGTLTDVNLAADTHIVGGTLRGLIIGDETHPARLENVTISAGSYLENVKLGADVQLADGVIYGKGVERIAPTQASNQVIITDSVQANGKVFKDITIAPTGVLTDAVLTGTITNLGQISTATLSTESTLTGGSISGQFTNQGTVKNVQLNNATLTGGLLAGQITNTQSIIQEVTLAPNTVIEGGQLQGQIKGDAHYPAILNNVQIASGSYLENVILGENVQVAKKVTYGDGVQQMAHSDVTPTTLITGLVQAEGQTLSTVTITAEGKLFNSTLTGTITNQGTIAHATLLPGTIVNGGHLAGNLISDGGTVTDVSLEAKSHLTGGQVQGRIEGQGEAQQRAQLDLVIITPNSYVSNIIIGQQVTNAGTIADSELQGANLEGGTLAGVILNTRGGTISNVQLAAGAQIKGGNLKGEIKGDPTQPAQLENVTIAAGSSLDNVIIDLATTTIAKNVNLGPGVQWVNQTPNQPTIAQPNYAAIALLKVAPTEYVAKNIDDSPTAPRFLSQIHTLQGLQPNHALLSYIQAEEINLDTTIQVAPEQVGQVADILMVRSYQSQEKTTYSMRQQDKWVTWNKDPSTLQVAQTVEQLPKKLTVKVADKMDLSKAAGEYTVYVGYRLADGTIIYNGATPLHFFVDSAPPACNVYAVHDEGVDDTQFLKIDLSYLGLKGVMTPLGPLYPHKNIEGLALHPANPNVLYGTAGTPATGQKSSSLYTIDRLTGEILSQMPLTVPEENLYFNQVASLAVNWNDKTLDRLWAWAKTNQKGNWMGLIQIDPNTGITTLVKQFTDKECQARYVSQLEQKQANNDSFHQHYTDLIQRNNNQPLTQLESTQVEKFIQKQCDIEALAWSYNAYNQEIPKLYAAGNNTLWIYDHLNTQELQLACVNVVPSGQLIEGLEMQPNGLLLLGIDHRNTKETSIVAYDPKTCRVVKKRTFENLAYNDIESIVWPVDECFNQSWLWPEEEPN
>NZ_AP014633.1|WP_045472633.1|686839_687310_+|peptide-methionine-(S)-S-oxide-reductase-MsrA
MPTATFAAGCFWGVEAVFRQITGVISTLVGYMGGTLENPSYQAVCTDTTGHAEVVQVEYDANQVSYETLLAVFWGNHDSTSLNRQGADVGTQYRSVIFFHTPEQETIARLSKDKLEKSGQYYAPIVTEIIPAARFYPAEEYHQQYLEKKGLSHCSI
>NZ_AP014633.1|WP_083942432.1|687335_688265_+|hypothetical-protein
MKKLGEVMRNIFRLVTLIGTLLFITIIYATPSAATWQRENLIGCNEKYFYTFIMERNNPASYYEYTETFSLAQYEIASSKLVNKTVIRKTRHVDKQADGHWVKEEQQTNAFDLNQFLSKDNLVYIFPADMSETQWFVQADGIYLQGDKGKAILVPKADLATKVPWFNAYSRIAGLYEINNNYYVLLEQGDELGGRSLENDFQQMIMVVTSDNYNKSWQLLNQRTTQKLSSDQNPWQVQVGCFKTVSSADQLVKQLAKAEFKAQINFSKSTHCHRVILIPRQVTQDAAKQQAQQLQEKLNIKGYIGKVEE
>NZ_AP014633.1|WP_045472639.1|688516_689413_+|formylmethanofuran--tetrahydromethanopterin-N-formyltransferase
MKINGIKIDDTFAEAFPMQATRILITAQDRHWAAIAAEAMTGFATSSLVCGCEAGIERELSPDETPDARPGFAILLFAMNSEKLTKQLQSRVSQCVLMTATSACFAGIHNNQPVPLGSLLRYFGDGWQVSKVINGKRYWRIPVMEGEFVCEETTGLVSAIGGSNFFILATTPSSALAAAEIAIEAMRHLPNIIMPFPGGIVRAGFKFSSRYKNLMLSTNHLFCPTLKGQVNSALDRETDAVLEIVINGLSEIDIQQAMRVGIQSVCALGRESGVTRISAGNYGGEMGSFQFHLQEILA
>NZ_AP014633.1|WP_045472643.1|689409_690234_+|formylmethanofuran-dehydrogenase-subunit-C
MTPLTFTLKTVPPQRVDLSNLVPHLLTHLSLTDIAALPLPCGNRTLRVDNLFEITGTNPETLLFYNTCNTLDSIGNNMQGGIIRVHGEVGAYLGQNMKGGEISVFGNSGVYVAAGMSGGELYIHGNAGSFLAAARPGETMGLRGGRVIVTGQAGDRVGDKMRRGMVLVEGNVGDYCGTRMIAGTIAVFGQAGHYTGFGMHRGTLLLSQPPIHLPVTFNECGQYDLLFLRLLAQVLYYSNSPKRTFLSRPVHRFVGDMACQGKGELLILSAVKPT

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Crispr_ID: NZ_AP014633_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP014633_5

1253253-1253353

Orphan

Consensus_repeat	Method
GACTACGAATCCGATCAGGATGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP014633_5

>merge|NZ_AP014633|5|1253253-1253353|CRISPRCasFinder
GACTACGAATCCGATCAGGATGAAAGTAGCCTACTTGATATGGGTGAAGAGGAAAGCTACTCATTAGGAGAAACCTCCGACTACGAATCCGATCAAGATGA

>NZ_AP014633|5|5|1253253-1253353|CRISPRCasFinder
GACTACGAATCCGATCAGGATGA	AAGTAGCCTACTTGATATGGGTGAAGAGGAAAGCTACTCATTAGGAGAAACCTCC
GACTACGAATCCGATCAAGATGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP014633.1\|WP_045473569.1\|1267861_1268914_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014633.1\|WP_045473552.1\|1246254_1247463_+\|tyrosine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235645
NZ_AP014633.1\|WP_045473547.1\|1241175_1241871_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293833
NZ_AP014633.1\|WP_052491766.1\|1241881_1242922_+\|folate-binding-protein-YgfZ	unknown	unknown	gnl\|CDD\|223431
NZ_AP014633.1\|WP_045479064.1\|1255116_1255884_+\|tRNA-pseudouridine(38-40)-synthase-TruA	unknown	unknown	gnl\|CDD\|234577
NZ_AP014633.1\|WP_045473564.1\|1262970_1263486_-\|5-(carboxyamino)imidazole-ribonucleotide-mutase	unknown	unknown	gnl\|CDD\|376377
NZ_AP014633.1\|WP_052491768.1\|1265221_1267213_+\|peptidase-M4-family-protein	unknown	unknown	gnl\|CDD\|341060
NZ_AP014633.1\|WP_045473566.1\|1263478_1264642_-\|5-(carboxyamino)imidazole-ribonucleotide-synthase	unknown	unknown	gnl\|CDD\|235674
NZ_AP014633.1\|WP_045473554.1\|1247573_1248233_+\|3-isopropylmalate-dehydratase-small-subunit	unknown	unknown	gnl\|CDD\|179314
NZ_AP014633.1\|WP_083942469.1\|1268864_1270034_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377165
NZ_AP014633.1\|WP_045473545.1\|1240806_1241028_+\|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|198034
NZ_AP014633.1\|WP_045473549.1\|1242972_1244667_-\|M23-family-metallopeptidase	unknown	unknown	gnl\|CDD\|366703
NZ_AP014633.1\|WP_083942470.1\|1270061_1270694_-\|prepilin-type-N-terminal-cleavage/methylation-domain-containing-protein	unknown	unknown	gnl\|CDD\|225076
NZ_AP014633.1\|WP_045473562.1\|1261840_1262962_+\|hybrid-sensor-histidine-kinase/response-regulator	unknown	unknown	gnl\|CDD\|381147
NZ_AP014633.1\|WP_045473551.1\|1244886_1245936_-\|CapA-family-protein	unknown	unknown	gnl\|CDD\|214858
NZ_AP014633.1\|WP_052491767.1\|1256128_1261573_+\|PAS-domain-S-box-protein	unknown	unknown	gnl\|CDD\|236842
NZ_AP014633.1\|WP_045473543.1\|1239059_1240268_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014633.1\|WP_045473558.1\|1249489_1250512_+\|aspartate-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|237845
NZ_AP014633.1\|WP_045473556.1\|1248239_1249325_+\|3-isopropylmalate-dehydrogenase	unknown	unknown	gnl\|CDD\|234832
NZ_AP014633.1\|WP_045473567.1\|1267286_1267850_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_AP014633.1\|WP_045473552.1\|1246254_1247463_+\|tyrosine--tRNA-ligase	gnl\|CDD\|235645	PRK05912, PRK05912, tyrosyl-tRNA synthetase; Validated.	0
NZ_AP014633.1\|WP_045473547.1\|1241175_1241871_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293833	cd16275, BaeB-like_MBL-fold, Bacillus amyloliquefaciens BaeB and related proteins; MBL-fold metallo hydrolase domain. Bacillus amyloliquefaciens BaeB may play a role in the synthesis of the antibiotic polyketide bacillaene. Members of this subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions. .	1.71866e-79
NZ_AP014633.1\|WP_052491766.1\|1241881_1242922_+\|folate-binding-protein-YgfZ	gnl\|CDD\|223431	COG0354, COG0354, Predicted aminomethyltransferase related to GcvT [General function prediction only].	1.26685e-74
NZ_AP014633.1\|WP_045479064.1\|1255116_1255884_+\|tRNA-pseudouridine(38-40)-synthase-TruA	gnl\|CDD\|234577	PRK00021, truA, tRNA pseudouridine(38-40) synthase TruA.	5.46251e-138
NZ_AP014633.1\|WP_052491768.1\|1265221_1267213_+\|peptidase-M4-family-protein	gnl\|CDD\|341060	cd09597, M4_TLP, Peptidase M4 family including thermolysin, protealysin, aureolysin, and neutral protease. This peptidase M4 family includes several endopeptidases such as thermolysin (EC 3.4.24.27), aureolysin (the extracellular metalloproteinase from Staphylococcus aureus), neutral protease from Bacillus cereus, protealysin, and bacillolysin (EC 3.4.24.28). Typically, the M4 peptidases consist of a presequence (signal sequence), a propeptide sequence, and a peptidase unit. The presequence is cleaved off during export while the propeptide has inhibitory and chaperone functions and facilitates folding. The propeptide remains attached until the peptidase is secreted and can be safely activated. All peptidases in this family bind a single catalytic zinc ion which is tetrahedrally co-ordinated by three amino acid ligands and a water molecule that forms the nucleophile on activation during catalysis. The active site is found between two sub-domains; the N-terminal domain contains the HEXXH zinc-binding motif while the helical C-terminal domain, which is unique for the family, carries the third zinc ligand. These peptidases are secreted eubacterial endopeptidases from Gram-positive or Gram-negative sources that degrade extracellular proteins and peptides for bacterial nutrition. They are selectively inhibited by Steptomyces metalloproteinase inhibitor (SMPI) as well as by phosphoramidon from Streptomyces tanashiensis. A large number of these enzymes are implicated as key factors in the pathogenesis of various diseases, including gastritis, peptic ulcer, gastric carcinoma, cholera and several types of bacterial infections, and are therefore important drug targets. Some enzymes of the family can function at extremes of temperatures, while some function in organic solvents, thus rendering them novel targets for biotechnological applications. Thermolysin is widely used as a nonspecific protease to obtain fragments for peptide sequencing. It has also been used in production of the artificial sweetener aspartame.	4.84104e-91
NZ_AP014633.1\|WP_083942469.1\|1268864_1270034_-\|hypothetical-protein	gnl\|CDD\|377165	pfam03934, T2SSK, Type II secretion system (T2SS), protein K. Members of this family are involved in the Type II protein secretion system. The T2SK family includes proteins such as ExeK, PulK, OutX and XcpX.	1.02659e-05
NZ_AP014633.1\|WP_045473566.1\|1263478_1264642_-\|5-(carboxyamino)imidazole-ribonucleotide-synthase	gnl\|CDD\|235674	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed.	2.92714e-169
NZ_AP014633.1\|WP_045473554.1\|1247573_1248233_+\|3-isopropylmalate-dehydratase-small-subunit	gnl\|CDD\|179314	PRK01641, leuD, 3-isopropylmalate dehydratase small subunit.	3.69117e-140
NZ_AP014633.1\|WP_045473545.1\|1240806_1241028_+\|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein	gnl\|CDD\|198034	smart00966, SpoVT_AbrB, SpoVT / AbrB like domain. This domain is found in AbrB from Bacillus subtilis. The product of the abrB gene is an ambiactive repressor and activator of the transcription of genes expressed during the transition state between vegetative growth and the onset of stationary phase and sporulation. AbrB is thought to interact directly with the transcription initiation regions of genes under its control. AbrB contains a helix-turn-helix structure, but this domain ends before the helix-turn-helix begins. The product of the B. subtilis gene spoVT is another member of this family and is also a transcriptional regulator. DNA-binding activity in this AbrB homologue requires hexamerisation. Another family member has been isolated from the Sulfolobus solfataricus and has been identified as a homologue of bacterial repressor-like proteins. The Escherichia coli family member SohA or Prl1F appears to be bifunctional and is able to regulate its own expression as well as relieve the export block imposed by high-level synthesis of beta-galactosidase hybrid proteins.	3.38339e-07
NZ_AP014633.1\|WP_045473549.1\|1242972_1244667_-\|M23-family-metallopeptidase	gnl\|CDD\|366703	pfam01551, Peptidase_M23, Peptidase family M23. Members of this family are zinc metallopeptidases with a range of specificities. The peptidase family M23 is included in this family, these are Gly-Gly endopeptidases. Peptidase family M23 are also endopeptidases. This family also includes some bacterial lipoproteins for which no proteolytic activity has been demonstrated. This family also includes leukocyte cell-derived chemotaxin 2 (LECT2) proteins. LECT2 is a liver-specific protein which is thought to be linked to hepatocyte growth although the exact function of this protein is unknown.	7.20131e-42
NZ_AP014633.1\|WP_083942470.1\|1270061_1270694_-\|prepilin-type-N-terminal-cleavage/methylation-domain-containing-protein	gnl\|CDD\|225076	COG2165, PulG, Type II secretory pathway, pseudopilin PulG [Cell motility and secretion / Intracellular trafficking and secretion].	1.02003e-05
NZ_AP014633.1\|WP_045473562.1\|1261840_1262962_+\|hybrid-sensor-histidine-kinase/response-regulator	gnl\|CDD\|381147	cd19920, REC_PA4781-like, phosphoacceptor receiver (REC) domain of cyclic di-GMP phosphodiesterase PA4781 and similar domains. Pseudomonas aeruginosa cyclic di-GMP phosphodiesterase PA4781 contains an N-terminal REC domain and a C-terminal catalytic HD-GYP domain, characteristics of RpfG family response regulators. PA4781 is involved in cyclic di-3',5'-GMP (c-di-GMP) hydrolysis/degradation in a two-step reaction via the linear intermediate pGpG to produce GMP. Its unphosphorylated REC domain prevents accessibility of c-di-GMP to the active site. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	6.42064e-58
NZ_AP014633.1\|WP_045473551.1\|1244886_1245936_-\|CapA-family-protein	gnl\|CDD\|214858	smart00854, PGA_cap, Bacterial capsule synthesis protein PGA_cap. This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein.	9.15525e-59
NZ_AP014633.1\|WP_052491767.1\|1256128_1261573_+\|PAS-domain-S-box-protein	gnl\|CDD\|236842	PRK11091, PRK11091, aerobic respiration control sensor protein ArcB; Provisional.	8.36447e-93
NZ_AP014633.1\|WP_045473564.1\|1262970_1263486_-\|5-(carboxyamino)imidazole-ribonucleotide-mutase	gnl\|CDD\|376377	pfam00731, AIRC, AIR carboxylase. Members of this family catalyze the decarboxylation of 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR). This family catalyze the sixth step of de novo purine biosynthesis. Some members of this family contain two copies of this domain.	1.35888e-90
NZ_AP014633.1\|WP_045473558.1\|1249489_1250512_+\|aspartate-semialdehyde-dehydrogenase	gnl\|CDD\|237845	PRK14874, PRK14874, aspartate-semialdehyde dehydrogenase; Provisional.	0
NZ_AP014633.1\|WP_045473556.1\|1248239_1249325_+\|3-isopropylmalate-dehydrogenase	gnl\|CDD\|234832	PRK00772, PRK00772, 3-isopropylmalate dehydrogenase; Provisional.	0

>NZ_AP014633.1|WP_045473558.1|1249489_1250512_+|aspartate-semialdehyde-dehydrogenase
MSRLFDVAVVGATGAVGETMISILEERNFPVNNLYLLASSRSEGKRIDFKGKSLVVSDLEKFDFAKVQIGLFSPGASVSAIYAPKAAQAGCVVVDNTSQFRQDKDIPLVVPEVNPQAIAQYKSRYIIANPNCSTIQMLVALKPIYDAVGIERINVATYQSVSGTGKEAIEELAGQTAALLNGKPITVKVYPKQIAFNVLPQIDIFMENGYTKEEMKMVWETQKIFEDDSILVNPTTVRVPVFYGHSEAVHIETRDKITVEQARALLQRAPGVVLMDERQPGGYPTAVTEAANQDPVFVGRIREDISHPRGLNLWVVADNIRKGAALNAIQIAEILIKDYI
>NZ_AP014633.1|WP_045473556.1|1248239_1249325_+|3-isopropylmalate-dehydrogenase
MTKTIAILPGDGIGPEIVTEAVKVLETLRDKFSLAIHLESGLVGGAAIDATGSPLPPATLDLAKRADAVLLGAVGGPKWESLDISIRPEKGLLGLRSELKLFANLRPVVLFPELASASTLKPEVVAGLDILIVRELTGDIYFGQPRGIRTLETGEKQGINTLVYTESEIERIARVAFASAEQRQKKLCSVDKANVLEATELWRQVVTRVSRDYPTVQLTHMYVDNAAMQLVRAPKQFDVIVTTNMFGDILSDLASQLTGSIGMLPSASLDANNKGMYEPIHGSAPDIAGQNLANPLATILSVAMLLRYSLNRVDLATAIERAVRQVLQAGLRTRDILGDGQYTVVTTREMGDAVVAQLRAQ
>NZ_AP014633.1|WP_045473554.1|1247573_1248233_+|3-isopropylmalate-dehydratase-small-subunit
MQAFTLLTGLVAPLDRANVDTDAIIPKQFLKSIYRTGFGPNLFDEWRYLDYGEPGQDCRHRPLNPEFFLNQARYQNAQILLAQHNFGCGSSREHAPWALLDYGFRALIAPSFADIFYNNCCKNGILPIVLPEETVDTLFKAVAATPGYQLTVDLAKQTVTTPSGAAFNFTLDAFRKNCLLNGLDDIGLTLQYANEIKAYEARRKPEAPWLFSTITHNPV
>NZ_AP014633.1|WP_045473552.1|1246254_1247463_+|tyrosine--tRNA-ligase
MVTITEALMQIKQGAQEILLEEELQTKLARGKPLRIKAGFDPTAPDLHLGHTVLLNKLRQFQQLGHTILFLIGDFTGMIGDPTGKNVTRQPLSKEQVLENARTYQEQIYKILDPETTQICFNSTWMSSMDAIGLIQLAAKHTVARMLERDDFHKRYTSGQPIAIHEFLYPLIQGYDSVALQADIELGGTDQKFNLLVGRELQKHYGQLPQVVITMPILEGLDGVQKMSKSLGNYIGIDEPPDEMFGKLMSISDTLMWRYIDLLSFKTPVEIQQWQQAVVEGANPRDIKVEFAQEIVERFHNQSAAVQAYENFVARFQQGQMPEEMPEVIVTVASAAIPITQLLKEAGLTASTSEAIRMIQQGAVKIDGERVSDRALQIPVTSNHVYQVGKRRFARVKINTSV
>NZ_AP014633.1|WP_045473551.1|1244886_1245936_-|CapA-family-protein
MKIVDKINAFLLIWLATSNYVQSQETISIIGVGDIMLGTSYPSQEYLPPNEGKDLLIAVNDLLASADVTFGNLEGTLLDQGATIKTNCNNCYAFRMPEYLAQNLVTAGFDILSLANNHVRDFGESGLQNTKQVLNRLGIYAAGLLSIPAVTFEKKGVKYGFAAFAPNVGTVSINDISNAQNIVRQLKQTADIVIVSFHGGAEGTDHQHVTRTTEIYYDEDRGNVYQFAHAVIDAGADIVFGQGPHVTRAVELYKDRFIAYSLGNFCTYGRFSLRDETSLAPIIKVNVNKTGQFVDAQITSIVQIKPGGVTLDPQQRVISLIRQLTQTDFPETNLTIEDNGIIHKRSINH
>NZ_AP014633.1|WP_045473549.1|1242972_1244667_-|M23-family-metallopeptidase
MKYKKITQQQRVHSRPRPQAKYIFNSPRSFQPLVGKNSMGLRGYTKPALPFKVVGYDFSIENGLRLKPRSNFWLRSTLLITTILTTLPLLWWLNSSSASIPSTASAANKSKVSFPIYNTTTPVAKVASATPISAQSTKQLPISLTQPVSLNPSQPIIYSEPLLNQPVLPWLHLTTKVGDTLATLFEQYQLNKTQLPPILAIELEGQPLQQLQAGQELHIKHDPKGNIHSLILVLNARDELYCSQVNGIFQAKIKPIEIYTKPISQCSTVNTSSMVPDLPQSLLAQLINIFYPKLDLKHQSREGDQFCVIYEERTLESDREAGPILAAEIIQQGQTHRAIRYTDQQGYTGYYTPMGDSWEQLSLLSAPVEFTRISSLFGDRKHPILNKFRTHTGIDYAAPRGTSIVAAGEATIAFIGYKGGYGRTVILEHNQRLHTLYAHLSKYEPELQVGDKVVTGQIIGYVGQSGRTTGPHLHYEIRIDDIPIDPLLAQAPLTMPISDEALLPFFAATQGLINQLNAAVSLSPVRLAENTFFAKKTPRIPITSILEQNSLQPFSLTDMPRISR
>NZ_AP014633.1|WP_052491766.1|1241881_1242922_+|folate-binding-protein-YgfZ
MIIEQWQQYLQQNGAQFEDNVVLHFGSPEQERQAALQGDILTDLSYFGIIKVSGSDAAKFLQGQLTNDVLQVNANQSQLTAWCNPKGRIIVNLRLFKRQDAYYLFLPQASVEITLKRLRMYILRAAVQLEDVSHQLVRLGIAGEQSASLIADNLKCIPPAAINASLTLETTTIIRVQGTQPRYLLFTETPQMIWSPLAQFARPVGAAIWQWLDILAGLPQIVPATSEEFVPQMINYSLIGGVNFKKGCYTGQEIVARMQYLGTLKRRMYLAKIDTTSLPQPGDALYVNSEPQSVGKIVNAQWHPHGGVVVLAVIQITHAEQDEIHWQTPLGEKLHWLDLPYPVADN
>NZ_AP014633.1|WP_045473547.1|1241175_1241871_+|MBL-fold-metallo-hydrolase
MMIKPTKTFSINALELGPMENFVYLIQDYRSKCAAVVDPAWEVTKVVALMQHQGFKITEVLLTHSHHDHTNGLDDLLNVFDAQVHLLKAEAQFWGQALKKPTLHYGGDTIQLGDTEIAIWHTPGHTPGSACYYLDGHLLTGDTLFVYGCGRCDLSGGEPEQMYHSLKKLATELAPATVIHPGHHYAHQPSSTLAEQLTGNPFMHFNNVTDFVHYRMYGHNRQTPYTPVITR
>NZ_AP014633.1|WP_045473545.1|1240806_1241028_+|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein
MRITTKGQITIPQHIREKLGITPNTEVDFLEKEGQVYLVKVDTNAKTSKFKRLRGIATVKMTTDKIMSLTRDS
>NZ_AP014633.1|WP_045473543.1|1239059_1240268_-|hypothetical-protein
MVGVCSKANQFLLFSFNYVLIDLCIDHSNKEPFMKKTSLVLAISALLFGTSSSYVLADMSSDEIQQYLNSTPENAPAPEGDGTLGFDPPQALPKNVAVAGSDQPIYWKGLKMCNPSFAVNGPAMAEFPVTVNGSVGTWSADKKTVTGPGWTLKPPVGDSWSSQWKLTVESGTVITSILLEPFKRKDPDQMRYAFDIGGKLPRYPAPRTEYEHTPDAARGQFIVQMTPGTPSPIFTATYSGPIYTGSMMEGRISTLPDYPDFHGPIGDSTDIPLASPYGTGDPKADRKPTHDLYSTLEIKFDSKVTGDLLIDPGFSFVADTDCLPVSEVKIISYENGILKFIVVGEGAVAIMDNAQKLVQGPFMVDRGQGQATFTTQFVPTAGSCYSMMDVDTLKVMTQNYCF
>NZ_AP014633.1|WP_045479064.1|1255116_1255884_+|tRNA-pseudouridine(38-40)-synthase-TruA
MRIALGVEYAGTHFCGWQFQPHAPSIQGCVEAALSKVAHHPVTVICAGRTDTGVHALAQVIHMDVTAQRSPRSWVLGANANLSKDISILWAQPVDEGFHARFSASARHYRYIILNRPTRPALLAKQVTWEHRPLNVEKMQVAANYLIGTHDFSSYRALACQAKNPIRTLSSLTVSRVDEQVIIEISANAFLHHMVRNIAGVLMTIGCGEQLPLWAKTVLESRNRTQGGVTAPASGLYLCGVDYPSPYIFPKQSIL
>NZ_AP014633.1|WP_052491767.1|1256128_1261573_+|PAS-domain-S-box-protein
MLENNHIIHLLRLEIAQLRQELAQVKQEKHYLELLLETSNYHGDSIETLLYDQTERVTRESEHRLAQFLEALPVGISVLNNQGQPYYINQKAKQILGQGIIPDTHLEQFPQVYQIYFAGTHQLYPYQHLPITRALQGELAYADDIEIHQANQIIPIEAWGTPIFDKQGQVCYAITVFQDIRLRKQAEEIARQAAEQQCVAAVENKFHHLVINVPGIVYQWYERRHGECGFYYLSPRCEEYSSIRIQEWQQHWQKLPIHPDDRFRLLKNYRQAVKHQQEWSFESRFILPSGQVKWWRGIAKPSQVSHDEIVFNGIIIDITEQKNLETKLREREAILADAQRMALVGSWIWDKNSQVIQRSEQDRRNLGLRNHEEAATFPDFIDRIYADDRLKVEAQIANCFDKQHPVEFEFRVVWPSKQIHYLRTRLEWEIDALGIPVAVKGFSQDITAYKQAEQARYESEERLNAFFHALPDLAFIFDEEGQYVEILSGPSQLLYDAAERLKGAYFHDVLPRADADKFLAVVRHTLATQTLQILEYSLDLPIGPRWFEGRAFPLQVKAEKRMVTFIARDITQRKQTEEALRENEEMFRAIGTSAQDAIVMMDSQGNISYWNESAERIFGYPKAEALGQNLHQFLAVGKYYQAYLCSAHFFQQTGQGALVGKTVELAAIKKNGTIFPVEISFSAVRLKGQWHALGIVRDITERKQADQALRESQQQLRSIISNLPVILYRIDHQGFITLLEGKGLQTLGLQPKEMIGKSVFELYQDYPHFLLAVQRALAGEEVIETLELTQVVLESCYIPVRNEQNKVTSIIGVAIDITERRQAEEKLRKLSRAVEQSASTIVITDLNGNIEFVNPTFSKKTGYTAAEAIGQNPRILKSGHQPPLFYEELWATITREQVWQGEFLNKRKNGELFWEFATISPIKAHDNQTTHYLAIKEDITERKQAEAALRQSEERFELAMRGASDGLWDWNIETDEVYYSPRFKQMLGLSDRDIGNRCSDWHNRIHPQDLPQVQAHLLAYLQQEIPAYEVQHREQHQAGHYLWILSRGIAIFNEQGKAIRMVGTIVDMTAQKQIEEALRQSEARYRLLAEHSTDLISRHNLGGIFLYVSPASFTLLGYKAEALLGQAVQKFIHPQDLKKIKQTYLQLLSTLTSQTVRYRICHQQGYYIWVETISTLVENTPLGNQQEIIAVSRDITERKQVEDNLQSHLQFLETLMNTIPIPIFYKDIQGRYLGCNLAFAQLISDQPPADLIGKTVYDIAPAAIAQLNTQIDQDLIRRRGKQTYETQVISKNGRYHDVIFSKAVYFNTNDEIGGIVGAFTDITERKKAEEELRQAIEVAEQAQQQAEVANRAKSTFLATMSHELRTPLNGILGYTQILSRDRTLTDKQREAIQIIYRSGEHLLMLINDILDLSKIEAGKLELRTADFALPEFLQDIVDLFKMRAQQKGIACYYEALSPLPLAVHADEKRLRQILLNLLSNAVKFTQQGQVSLKVIYGNHRAGFEVEDTGEGISAVDRETIFLPFRQLSQQNHLIEGTGLGLSISKHLVEMMDGQLYVESILGQGSLFWFEIKLPEVQAISKPPRSNSPTVIGYRRRIDKIQTDADTKDKPFTLLIVDDKWANRQVLVNLLTELGFQVLEADNGQEALELAHKNQPDLIITDLMMPTMDGFELTRQIRQTTSLQTTVVIAASASVFEHHRRQSIQAGCSEFIAKPINTQVVLDLLSHYLLLDWIYEEPTPTIPVTTAITPAIKPSAAQMATLFKLVMTGKVQKIIEYTTQLEQQDPSLSPFAQEVRYLAKNFEMNKLRALVSTEV
>NZ_AP014633.1|WP_045473562.1|1261840_1262962_+|hybrid-sensor-histidine-kinase/response-regulator
MITKQPTTILIVDDVPSNVSVLFDFLTTHDFEVSVAQSGESALQLVDYEIPDLILLDVMMPGMDGLETCQQFKSNPKTQAIPIIFMTALAETIDKIKGFKAGAVDYITKPFQQEEVLARINTHLTIHQLQQQLHEKNSELELQNIELAAKNTELDTFARTVAHDLKNPLQSLVGFADLLLDTLVARIEPEELEYLQYISQSGQKMLEIIDSLLLLARVSQQEIEPTPLNMPEIITQVQQRLAPLIKACQGEIILPADWPIAQGYALWVEEIWVNYLSNGLKYSGQPPHLELGATPHKNKIRFWVRDNGTGLSLPDQAKLFHPFIRLSQNQTQEGHGLGLSIVRRIVERLGGEVGIESQPGQGCLFYFTLPALT
>NZ_AP014633.1|WP_045473564.1|1262970_1263486_-|5-(carboxyamino)imidazole-ribonucleotide-mutase
MLNPSVGIIMGSDSDLPILQAAAQILEELQVAYELTIVSAHRTPQRLVDYAQQAEAKGLEVIIAGAGGAAHLPGMIAAITPLPVIGVPVKTGHLQGLDSLLSIVQMPSGVPVATVAINNAKNAGILAAQMIGIKQPEVRQRVRQYKAQLATEVSEKANLVETMGYKQYLER
>NZ_AP014633.1|WP_045473566.1|1263478_1264642_-|5-(carboxyamino)imidazole-ribonucleotide-synthase
MKSKVFPYPVKRIGIIGGGQLGKMTAQAAKQMGFYVTVLDPTPHCPAAHLADAQIVGELYDATTLTALAQVSEVLTYDVEHIDVQTLKKLAQAGHVISPSPELLEIIQDKFLQKQQLRKYGIPVPQFAAFEQVTPEHLAQFGFPVVQKARFGGYDGKGVVVLKNQADLEQILPGPSILEQFIPIEKELAIIIARTATGETACYPIVEMRFDDNANICQAVIAPAPIDNAIAEQARQVALQAIESLQGVGIFGVEMFLTATGQILVNEIAPRPHNSGHYTIEACMTSQFEQLIRVISGLPLGMTTLLRPVVMFNLLGEKGYHGAPIIEGLADALAIPGLSFHFYDKKSTHPLRKMGHITILDDNLDNAMTKLRQAKMVLKIIGAEQDA
>NZ_AP014633.1|WP_052491768.1|1265221_1267213_+|peptidase-M4-family-protein
MNKHIFLNNIILLIGGYCLCFTVSVTAANLKSIQPDGDNNTWSSTIMNPLVNVPFFFSKDGWRLESNQTDKMGTLHKRFQQTYMGIPVFGYRIATHEQDDVLKRVNGVVVEGLDSEIKTTIPKLSKLAAHNQAQSIFLKEQDNSSDWLFDNEKIEVIIYIDETSQQAKLAYYVNFFAKNDLEGHFAQPHLIIDALDGTLLKQWDGLNHDKIGTGPGGNIRMPNAPYYYGTTPNYDFLEVTVSNDKKTCRLETADVKTVIYPYSSAFAYTCPNNTKEQINGAFSPLNDVHYFGQKTFDLYRNWYGINVLPFKLQMNVLYWYYYDNAFWSGTQVYFGDGDYYFHPLVSLDIVAHEISHGFTERNSKLIYTDQSGGINEAFSDMAGETAEFYVLGNNDWNIGAYITKEDGPLKGNPARYMCDPSLDGYSIDHADKYQPGMDVHHSSGVFNKAFCILAHKTGWDTKKAFEVMVEANRHYWSANANFNDAACGVELATENLGYNVFDAYDTFLQVGVEATCGVVLTSPCLATYSNETKQATIPCLQVPLYTDIDGKPLYTDVDGQPLPLTALYSAVLNMPLGFTNIQVNQVSFLDWIIQPSANQAKFTPENGILEIPSIYLPAHLIPDYQGTPVDKLANCHITLQQFIFPNPGIFNLSSYSCNLSKTK
>NZ_AP014633.1|WP_045473567.1|1267286_1267850_-|hypothetical-protein
MLQLNNSFSKEFQQNLRLRIGSGLIVIILVTYAILELNDYHHRFQQDYHNAVAQLSQLQTVATQKQWPDRAAETQQLLTQLEARLWQANTKGLAQATFQKWFNDQVNLTKINNARLTVDPAIEVEHYSYLWQVTAQLEGQFESNKVNNLLLAIAQNIQMTVTERFDIFPSASNPKFTLIITAYFQKV
>NZ_AP014633.1|WP_045473569.1|1267861_1268914_-|hypothetical-protein
MRPQFFSTQRYLQRRYDVIIPPERARGRREWVISRGLCHYRCFTLKDIPVNRREPVLQLQIQQWSPFPEYGSYIVWRGEQAQVWIWDQVIQQNKWLETGLKKATLLPETVLQIRPTTETTQLLQCIEGYEGQIWQQGVLVGSRWWSSKPSPAEWSLFQRAHGLAAHSQLSMILVAAPLLNRPWGRAPHRLNKFSFLYKESTWITSSVAIMTVILTWQSISIVKWQHSVNQIQQQIETLNEQVTPILTARTQALANRQRFEQLLALSTAQPLQLELMAKVAEKLPKNKVHFINWSYQLKELRFTIEADEQIDPTQYIKTFQSLPFLTEVKVDTFTDPKKLILKMRVEPSQL
>NZ_AP014633.1|WP_083942469.1|1268864_1270034_-|hypothetical-protein
MVMQQSQTGFVLVMTLWVLVILTLAASSFAVWTQRTIERVQTRQTDLQGEIDMYNTQATLIYLLTTQRFTIAGVTISKAVAQEKPPVSLENLADDSKTLEEIMDEFVAMQKQQKQQQNNPAIFGDEDNDTILSDGTEIALDDQPYFGYGKAYFALQDEGGLLNLQLETETVLTRLLSLFGIENELQAPLIAKFNDYIDSDDLHRLNGAEAYHYEERHLPPPRNHFLLHPLEIYRVLDWSDQKNLWKNDQLGQITTVTVAAHPNFNTAPSLVLQAAYNLNELAAERLIKIRQSLPFYTLTTVTQIAGMPPEVDPFETNFFPAQALRLTLWYEGARYMRQAYIRLTHTFDGNKPWQVDANLQLTLLPYYIQTSPAHAPTILFDSTLSAKTL
>NZ_AP014633.1|WP_083942470.1|1270061_1270694_-|prepilin-type-N-terminal-cleavage/methylation-domain-containing-protein
MIFSEMQPFKPTPSPNYFFHGFTLLEMLVVLVLMGLISMLLLESFTYILHLRSRFLEQLDDSQRGILQEYWFRSTLAGIVTDYEDGKSIFQGQPRELSGLTLAALDMQVGVPTSFAWQLQYTDGITTLRYQNSQGDYWEVAKWSGDSGEFQYMSMEGEWHKQWPPQFGLKALQIPKMILFQGQRRQMPINWLVKLSDANYTRYDYRLYED

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Crispr_ID: NZ_AP014633_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP014633_6

1566280-1566422

Orphan

Consensus_repeat	Method
TGGGAAGATTTTAAGCAAGAACTACAACGAGATCGAGAAGAACAAGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP014633_6

>merge|NZ_AP014633|6|1566280-1566422|CRISPRCasFinder
TGGGAAGATTTTAAGCAAGAACTACAACGAGATCGAGAAGAACAAGCTAAAAAGTGGGATGAACAAGCCCGCAAATGGGATGAACAAAACCACAAATGGGAAGATTTTAAGCAAGAACTACAACGAGATCGAGAAGAACAAGC

>NZ_AP014633|6|6|1566280-1566422|CRISPRCasFinder
TGGGAAGATTTTAAGCAAGAACTACAACGAGATCGAGAAGAACAAGC	TAAAAAGTGGGATGAACAAGCCCGCAAATGGGATGAACAAAACCACAAA
TGGGAAGATTTTAAGCAAGAACTACAACGAGATCGAGAAGAACAAGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP014633.1\|WP_045473975.1\|1561784_1563416_-\|alpha-D-glucose-phosphate-specific-phosphoglucomutase	unknown	unknown	gnl\|CDD\|100087
NZ_AP014633.1\|WP_045473973.1\|1560182_1561547_-\|phosphomannomutase/phosphoglucomutase	unknown	unknown	gnl\|CDD\|100091
NZ_AP014633.1\|WP_045479240.1\|1552116_1553601_+\|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|181058
NZ_AP014633.1\|WP_045473986.1\|1569761_1570748_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014633.1\|WP_052491815.1\|1574239_1574923_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|381601
NZ_AP014633.1\|WP_045473991.1\|1573035_1573425_+\|YraN-family-protein	unknown	unknown	gnl\|CDD\|237119
NZ_AP014633.1\|WP_052491816.1\|1574988_1575573_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|215619
NZ_AP014633.1\|WP_045473984.1\|1568251_1569295_-\|S-methyl-5-thioribose-1-phosphate-isomerase	unknown	unknown	gnl\|CDD\|235578
NZ_AP014633.1\|WP_083942492.1\|1571214_1573017_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|367906
NZ_AP014633.1\|WP_045473993.1\|1573432_1574152_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224054
NZ_AP014633.1\|WP_045473995.1\|1577947_1578808_+\|protease-HtpX	unknown	unknown	gnl\|CDD\|235478
NZ_AP014633.1\|WP_045473980.1\|1565262_1565943_+\|lipoprotein-releasing-ABC-transporter-ATP-binding-protein-LolD	unknown	unknown	gnl\|CDD\|131266
NZ_AP014633.1\|WP_045473967.1\|1557550_1557985_+\|DNA-polymerase-III-subunit-chi	unknown	unknown	gnl\|CDD\|377329
NZ_AP014633.1\|WP_045473963.1\|1554644_1555751_-\|LPS-export-ABC-transporter-permease-LptF	unknown	unknown	gnl\|CDD\|275200
NZ_AP014633.1\|WP_045473978.1\|1564019_1565270_+\|lipoprotein-releasing-ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|274034
NZ_AP014633.1\|WP_052491817.1\|1575874_1577884_+\|transglycosylase-SLT-domain-containing-protein	unknown	unknown	gnl\|CDD\|183236
NZ_AP014633.1\|WP_045473977.1\|1563584_1564007_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014633.1\|WP_052491814.1\|1566988_1568230_-\|adenylate/guanylate-cyclase-domain-containing-protein	unknown	unknown	gnl\|CDD\|306677
NZ_AP014633.1\|WP_045473961.1\|1553695_1554460_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014633.1\|WP_045473965.1\|1555924_1557487_+\|leucyl-aminopeptidase	unknown	unknown	gnl\|CDD\|234863

Protein	Function_ID	Function_description	E-value
NZ_AP014633.1\|WP_045473975.1\|1561784_1563416_-\|alpha-D-glucose-phosphate-specific-phosphoglucomutase	gnl\|CDD\|100087	cd03085, PGM1, Phosphoglucomutase 1 (PGM1) catalyzes the bidirectional interconversion of glucose-1-phosphate (G-1-P) and glucose-6-phosphate (G-6-P) via a glucose 1,6-diphosphate intermediate, an important metabolic step in prokaryotes and eukaryotes. In one direction, G-1-P produced from sucrose catabolism is converted to G-6-P, the first intermediate in glycolysis. In the other direction, conversion of G-6-P to G-1-P generates a substrate for synthesis of UDP-glucose which is required for synthesis of a variety of cellular constituents including cell wall polymers and glycoproteins. The PGM1 family also includes a non-enzymatic PGM-related protein (PGM-RP) thought to play a structural role in eukaryotes, as well as pp63/parafusin, a phosphoglycoprotein that plays an important role in calcium-regulated exocytosis in ciliated protozoans. PGM1 belongs to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.	0
NZ_AP014633.1\|WP_045473973.1\|1560182_1561547_-\|phosphomannomutase/phosphoglucomutase	gnl\|CDD\|100091	cd03089, PMM_PGM, The phosphomannomutase/phosphoglucomutase (PMM/PGM) bifunctional enzyme catalyzes the reversible conversion of 1-phospho to 6-phospho-sugars (e.g. between mannose-1-phosphate and mannose-6-phosphate or glucose-1-phosphate and glucose-6-phosphate) via a bisphosphorylated sugar intermediate. The reaction involves two phosphoryl transfers, with an intervening 180 degree reorientation of the reaction intermediate during catalysis. Reorientation of the intermediate occurs without dissociation from the active site of the enzyme and is thus, a simple example of processivity, as defined by multiple rounds of catalysis without release of substrate. Glucose-6-phosphate and glucose-1-phosphate are known to be utilized for energy metabolism and cell surface construction, respectively. PMM/PGM belongs to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the phosphoglucomutases (PGM1 and PGM2). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.	0
NZ_AP014633.1\|WP_045479240.1\|1552116_1553601_+\|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein	gnl\|CDD\|181058	PRK07609, PRK07609, CDP-6-deoxy-delta-3,4-glucoseen reductase; Validated.	4.68514e-83
NZ_AP014633.1\|WP_052491815.1\|1574239_1574923_-\|hypothetical-protein	gnl\|CDD\|381601	cd01021, GEWL, Goose egg-white lysozyme. Eukaryotic goose-type or G-type lysozyme (goose egg-white lysozyme; GEWL) catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetylglucosamine (GlcNAc). Mammals have two lysozymes. This family corresponds to human and mouse lysozyme G-like protein 2.	5.31324e-25
NZ_AP014633.1\|WP_052491816.1\|1574988_1575573_-\|hypothetical-protein	gnl\|CDD\|215619	PLN03185, PLN03185, phosphatidylinositol phosphate kinase; Provisional.	7.20374e-18
NZ_AP014633.1\|WP_045473984.1\|1568251_1569295_-\|S-methyl-5-thioribose-1-phosphate-isomerase	gnl\|CDD\|235578	PRK05720, mtnA, methylthioribose-1-phosphate isomerase; Reviewed.	2.55977e-172
NZ_AP014633.1\|WP_083942492.1\|1571214_1573017_+\|hypothetical-protein	gnl\|CDD\|367906	pfam04348, LppC, LppC putative lipoprotein. This family includes several bacterial outer membrane antigens, whose molecular function is unknown.	8.74468e-94
NZ_AP014633.1\|WP_045473993.1\|1573432_1574152_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	2.43414e-65
NZ_AP014633.1\|WP_045473995.1\|1577947_1578808_+\|protease-HtpX	gnl\|CDD\|235478	PRK05457, PRK05457, protease HtpX.	5.27351e-166
NZ_AP014633.1\|WP_045473980.1\|1565262_1565943_+\|lipoprotein-releasing-ABC-transporter-ATP-binding-protein-LolD	gnl\|CDD\|131266	TIGR02211, LolD_lipo_ex, lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina. [Protein fate, Protein and peptide secretion and trafficking].	1.35984e-119
NZ_AP014633.1\|WP_045473967.1\|1557550_1557985_+\|DNA-polymerase-III-subunit-chi	gnl\|CDD\|377329	pfam04364, DNA_pol3_chi, DNA polymerase III chi subunit, HolC. The DNA polymerase III holoenzyme (EC:2.7.7.7) is the polymerase responsible for the replication of the Escherichia coli chromosome. The holoenzyme is composed of the DNA polymerase III core, the sliding clamp, and the DnaX clamp loading complex. The DnaX complex contains either either the tau or gamma product of gene dnax, complexed to delta.delta' and to chi psi. Chi forms a 1:1 heterodimer with psi. The chi psi complex functions by increasing the affinity of tau and gamma for delta.delta' allowing a functional clamp-loading complex to form at physiological subunit concentrations. Psi is responsible for the interaction with DnaX (gamma/tau), but psi is insoluble unless it is in a complex with chi.	9.00525e-41
NZ_AP014633.1\|WP_045473963.1\|1554644_1555751_-\|LPS-export-ABC-transporter-permease-LptF	gnl\|CDD\|275200	TIGR04407, LptF_YjgP, LPS export ABC transporter permease LptF. Members of this family are LptF, one of homologous, two tandem-encoded permease genes of an export ATP transporter for lipopolysaccharide (LPS) assembly in most Gram-negative bacteria. The other permease subunit is LptG (TIGR04408). [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides, Transport and binding proteins, Other].	2.38644e-98
NZ_AP014633.1\|WP_045473978.1\|1564019_1565270_+\|lipoprotein-releasing-ABC-transporter-permease-subunit	gnl\|CDD\|274034	TIGR02212, releasing_system_transmembrane_protein_lolC., lipoprotein releasing system, transmembrane protein, LolC/E family. This model describes the LolC protein, and its paralog LolE found in some species. These proteins are homologous to permease proteins of ABC transporters. In some species, two paralogs occur, designated LolC and LolE. In others, a single form is found and tends to be designated LolC. [Protein fate, Protein and peptide secretion and trafficking].	3.78624e-175
NZ_AP014633.1\|WP_045473991.1\|1573035_1573425_+\|YraN-family-protein	gnl\|CDD\|237119	PRK12497, PRK12497, YraN family protein.	1.65442e-48
NZ_AP014633.1\|WP_052491814.1\|1566988_1568230_-\|adenylate/guanylate-cyclase-domain-containing-protein	gnl\|CDD\|306677	pfam00211, Guanylate_cyc, Adenylate and Guanylate cyclase catalytic domain.	1.09013e-82
NZ_AP014633.1\|WP_052491817.1\|1575874_1577884_+\|transglycosylase-SLT-domain-containing-protein	gnl\|CDD\|183236	PRK11619, PRK11619, lytic murein transglycosylase; Provisional.	3.38201e-85
NZ_AP014633.1\|WP_045473965.1\|1555924_1557487_+\|leucyl-aminopeptidase	gnl\|CDD\|234863	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional.	0

>NZ_AP014633.1|WP_045473980.1|1565262_1565943_+|lipoprotein-releasing-ABC-transporter-ATP-binding-protein-LolD
MNEIVLRCENIYKSFKEGGLSVEVLRGVELSVSAGEQIAIVGSSGSGKSTLLHLLGGLDIPSQGEIWVAGKPINQLNPAQRASWRNQHLGFVYQFHHLLPEFTALENVGMPLLIRGLSPAEAQQKAAHILTEVGLGNRLKHKPGELSGGERQRAAVARALVTEPKCVLADEPTGNLDHRTAEQVYERMLELNQVVGTSLVLVTHDPVLAKRMNRTLRLLDGVLVAE
>NZ_AP014633.1|WP_045473978.1|1564019_1565270_+|lipoprotein-releasing-ABC-transporter-permease-subunit
MFKPLPFYIGLRYTRAKRRNHFISFISLTSILGIALGVTALITVLSVMNGFEKELRYRMLGMSAHVVIDTYNGHWSDWQILAESLRKQPHIIGIAPFIQGQAMVSFEENVYGTMLQGILPELEPQVSQVKEKMIAGSIDNLRAGEFGIVIGSELANSLGTGVGRKITLVVPQASVTPIGVLPRIKRFTVQGIFTVGIHEYDSSLVLLHLADAAKLLRLPPGSIHGLNIKLDDMFMATSLSHRLQNELPVGYRSYDWTYRYANFFAAIKMEKTVMFVILTLIVAVAAFNIVSTLVMVVTDKQADIAILQTLGATPRTIMAIFIVQGALIGVLGTLLGLGGGISLALNIETLIPVIENFFDTKFLSSDIYYISELPSDLRWLDVYKITILSLLISLFATIYPAWRASRTHPAEALRYE
>NZ_AP014633.1|WP_045473977.1|1563584_1564007_+|hypothetical-protein
MNLEQLTTLKHKLVTANNFKETWEYFFEHFGGNPHFLKMGKRVTSPLLEAIVTKLGQELFQQSSQANHLLLTEIEAYHFIHGACLLEKHIVTLLFFTDIDMGLFAISMEEMEISLIRFSSMKIEMNNNTFLSPFVSHAIN
>NZ_AP014633.1|WP_045473975.1|1561784_1563416_-|alpha-D-glucose-phosphate-specific-phosphoglucomutase
MNIQIISTIPFAGQKPGTSGLRKKVKVFQQPHYLENFVQAIFNSLSGFQGQTLVVGGDGRYYNQTAIQTILKIAAANHFGRVLVGQNGLLSTPAASAVIRKHQAFGGIILSASHNPGGPQGDFGIKYNISNGGPAPEKVTDAIFAQSQTITEYRLLNSPDIDLSQCGQTQLGEMSVEIIDPVADYAELMEKLFDFNAIRQLFQAGFTLRYDAMHAITGPYAKVILENKLGAPTGTVMNGIPLEDFGGGHPDPNLTYAHDLVAILYGANAPQFGAASDGDGDRNMILGQHFFVTPSDSLAVLAANAHLTPGYRSGLAGIARSMPTSKAADRVAQALNINCFETPTGWKFFGNLLDAGQATLCGEESFGTGSNHVREKDGLWAVLFWLNILAVRQQSVETIVYEHWAKYGRNFYSRHDYEDVDAQAAQTLMTHLVNQFSQLPGKTWGSRTVAFCDDFSYTDPIDQSISTNQGLRINFQDDSRIVFRLSGTGTEGATLRVYLESFEADVAKHHLDAQVALADLIQIANEIAQIQKYTGRDKPSVIT
>NZ_AP014633.1|WP_045473973.1|1560182_1561547_-|phosphomannomutase/phosphoglucomutase
MSIFKAYDIRGIVGENLTPVVVTQIGQAIGSEAIAQGQAQVVVARDGRLSGLELLTALITGLQAAGCPVIDIGMVPTPVLYFATYYLNTGNGVMLTGSHNPPNYNGLKIMIGGEALSGERIQALKTRIDNNELSYGNGTLESLDIGAAYIKRITDDIKLARPFKVIIDAGNGVTGVLAPQLIRALGCEVVELFCEIDGHFPNHHPDPSVPENLVEMIAVVKSENADLGFAFDGDGDRLGVIDAKGKIIWPDRQMILYATDLLKRHPGAQIIYDVKCSRHLDHAIQQHGGKPLMWKTGHSLIKAKMKATGALLGGEMSGHVFFKERWYGFDDALYTAARLLEILSQDNRQPEEVFASLPDAVNTPELKLELKQFGEHFELMQKIRDTFQFEAAQVATIDGVRADFQDGWGLVRPSNTTPSLIFRFEADNLAALTRIQTQFRQQLLAIDKQLKLPF
>NZ_AP014633.1|WP_045473967.1|1557550_1557985_+|DNA-polymerase-III-subunit-chi
MPQIDFYILHTKARQERDRLACQLVDKAWHQGYRTYIHTHSLIQAKQLDDLLWTFKDTSFLPHDIYPEVLSSTAPIRIGYTDQLCEKMEVLINLTATVPPFFALVKRIAEIVDDTPTAREAGRDRYRCYQQTADNVLKVHEIYR
>NZ_AP014633.1|WP_045473965.1|1555924_1557487_+|leucyl-aminopeptidase
MEFNVKSGHPEKQRTACVVVGVYEPRRLSEVAKQIDEVSGGHLSSILRRGDLEGKSGQTLLLHNVPGTLADRVLLVGCGRERELGDTQYRKVIAHAIRTLHETGSMETVCYLTELNVRGRDTAWRIRHAIETAQATLYSFDQLKSKKDITRRPLRKIVFSVGSRRELALAEQASREAQKIADGVKLAKDLGNMPGNLCTPSYLADQAKTLCNLHEKMSCKVLIETHLEKQGFNALLAVAKGSEQPPRLIILEYRGGKKNDLPIVLVGKGVTFDSGGISIKPSKDMDEMKFDMCGAAAVLGTLSAVADLQLPVNLIGIIPAVENLPSGKATKPGDIVTSLSGQTIEILNTDAEGRLILCDALTYAERYKPDVVIDIATLTGACVIALGKPAHGLFSNHNPLTNDLLNAGRISCDRAWELPLWDDYQEQLDSRFADIANIGGREAGAITAACFLSRFTKKYRWAHLDIAGTAWLTGKEKGATGRPVPLLTQYLIERSREDDPNLMTTIPLPPITQTEDEDEA
>NZ_AP014633.1|WP_045473963.1|1554644_1555751_-|LPS-export-ABC-transporter-permease-LptF
MEFFLIISRYLFREILYNLLALTALLLLIYVSHRFMAYLVQASTGILPAAFIFQLVALRLLTDLMLILPLSFFLALLLALGRLYKDNEITAMAACGIPVPVMSIFISSFIFAGVISLLSLILAPWAENQRDILITQLQTVAEVGGIAAGRFKEFSQGKGTFYVEKLDNKTNTMQTLFVQINLPNKRITLVAKQGYQIMDKGELYLVLVDGHRYENQPGSLNYTITQFSEHHIRIPKKIDNHRGENQAALPTGSLFQKMAPIYQAELQWRLSLPIMVVLLAGLAIPLSHTTPRQSHYFKIVIGILIYLIYNNLLSIFKKWVEREEISPWIGIGWVHLGLLLIILILFNFSKLKLKYRYWISWLFASRKC
>NZ_AP014633.1|WP_045473961.1|1553695_1554460_+|hypothetical-protein
MTDYHINCLRPLFTDELLNLLQQGISVNLIAQAGQGRKRLLEDIQTAHLKNTKIIIVDIKHHLNSYDDLIQTLWQQLDGTTQAPTTWEELIAAINKKYNRTIIVLYHFDDLLDNLSIDSKFNINFFNQLDKISHNPHISLLCVTSQAHDQSMVCTEGLKRNYSWLDLEKKKLPKLSYDEIQFELKNRNLSLAAEELSQLTWIIHKHTLPYTLLDFLAAKIAHQEDPELAFSDRMEKWIKQFDESNRTEELPRFI
>NZ_AP014633.1|WP_045479240.1|1552116_1553601_+|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein
MPQLLSLSRAARLVGITRSALQKSIQSGQLSTFEGKVTVTDLLRAYPETQMENTTMLERVERIKIEAIYEQRRSDTTTLPHPEILMARLTKLSKELVSTKNELKKYLELIEALWQKITELEQIEDAQLRSHCHALYEWLVSEKQSYSQIINEAVIQLLAKDTVLRIMAAHVKLIPSGHEFFIEGSASILEAALQAGIALNYGCSSGNCGLCKARVVVGEVQKIRQHDYVISEAEKLMGYKLMCAHTAITDLIIEAEEAHHVTDIPFQQIEAKVKKLEKVTPDSLILSLQTPRTKTLRFFAGQMVTLRLEGGLSGHYFIASCPCDGRNLEFHLDQSADNSLTELAFKQLKLGQSVNIEGPKGDFVLQENSTRPALFMAYSHGFAPIKSLLEHAFALDTIASFHLYWLASHENGFYQNNLCRAWADALDSFQYTPLVATNDELSLKQALSSILLEYSDLSRFEVYIAGPELFITVVKGLLQQHQLPTTQLHSAASA
>NZ_AP014633.1|WP_052491814.1|1566988_1568230_-|adenylate/guanylate-cyclase-domain-containing-protein
MAINLGFSQYTTWRRDFMLSRLWIGGIIGIVAVMSFIVLNLSHYPNLEPPWLYTNLTQEAALLLCLLLLLSPRGRSYPGLIFLLFSWALTLVPQYWYFLLEGVAKLDFVTWTLLFLGQTTLIPVRWSLHLLSQLGVFVCFFFIQFYFGAVIESNIANADSFFLYLYLFWFCVICDISVFFYEKLQRKEFDTKQNLEVEQEKSERLLLNILPQSIAERLKQPGATVAENFTEVTVLFADIAGFTAMSTGMSPLQLVELLNEIFCKFDKLVELHGLEKIKTIGDAYMVVAGLPEPNPNHVTQMAEMALDMQTTIAKFNQQYYKNLHIRIGIHTGPVVAGVIGIKKFAYDLWGDTVNIASRMESHGMPGKIQVSDNVYQILRNHYVLVKRETIQVKGKGEMTTYWLQARQTDLIAN
>NZ_AP014633.1|WP_045473984.1|1568251_1569295_-|S-methyl-5-thioribose-1-phosphate-isomerase
MIYQGDSLCPLTWQEERLHLLDQRWLPHQQQIVVLATAAEVAQAIKDMVVRGAPAIGIAAAYGVVLAAQSAYAQAPPHWQTIITADLQKLAQARPTAVNLVWALQRMQTHFSTIVADPVPILLAEAHRIHQEDLAANHRMGELGADLLPAACRVLTHCNAGALATGGYGTALGVIRTAHRAGKLSQVYADETRPWLQGARLTAWELLQDNIPVTLLADNAAAALMQQQRIDWVIVGADRITARGDVANKIGTYGLAILARQHGVKLMVVAPTSTIDMNLMEGSAIVIEERSQAEVLTVNGQAIAPVGAQAWNPAFDVTPSHLVDVIVTEKGVVTQPNLERMTAIMRS
>NZ_AP014633.1|WP_045473986.1|1569761_1570748_+|hypothetical-protein
MIIKQSLLKVALSLSVGISLFSFTPEILADQSRILYAGQHTEVGVVDVLINGDTTTVDYTITTPGWCLNLTHLYVGTTEPKKIAPGQFPYAHTNLGCTQFDSYEVPTSQCGYVAAHAEVTQWSVPIGGEVTYKVSHSSSTREEGLFDGDILINGEWQRHLSRCVDLDHSIGSNKEYTCTLYSSLDMNAPVDKPANLDLLNYMLNHQDEYMADPNLGGLGLGPATKKDILAAGWTLIENSPIPSNLKGNQLRVDYIVNQALLYGEGFIPGPDDIIGIIVYCGTKVQVTLMEFIRGDIELGSETAWAQGDFPFLNNKGKPTGWGTYFQCH
>NZ_AP014633.1|WP_083942492.1|1571214_1573017_+|hypothetical-protein
MSMKIHTSTYLIILFALLLSSCGTWLPKHNEPTTSQLVSDPAVKAKQLEMQGYYPEAAHEYLRIAAQMRPPTQQGYQLSAIKALVQANMITEAKAELARLDIKQSYGLEIPLELVRIKIDLAEQQVESASQRLKGIDSNTLPLPLQLEYKQLYAQIEMAKGDTLGAVHQWIEVDKLTQANPNLLRKNHQQLWRTLLSYPLNDLKQIEQSPGDIFSGWVALSLLVSTTPQGYLQAALDNWQLRFPNHPANQDIIPTLLIPPTNQISAQPQPLKQIALLLPLSGKFGDWAEAIKNGFITAAEADSLANRPQINIHDVNSENILESYDKAVKAGAEFVVGPLEKQDLEMLADKKKPQLPVPTLGLNHLETPITTGNLYQFSLSPEDEAQIVAIRAANDGHRSALVFVPEGDWGKRLLTAFQTEWEKRGGKIVREQSYGNHFEVAVGQLRQNLNQGDMLFLVAFPPLARQILPLLNADSTQRLPIYSTSHLYAGTPDQERDKNLNGVKFVDMPWILVPDSKAQQLHSLLQTGWPSEKIEKLSRLHALGVDAYELLSRLRSLDSQTSFQWPGQTGHLSLSQDGKIHRDQLQWAHFVEGVPQLLNE
>NZ_AP014633.1|WP_045473991.1|1573035_1573425_+|YraN-family-protein
MSRHYQFSSQAGQWAENFAHAYLCQQGLQPIERNYRCRQGEIDLIMQQQAILVFIEVRYRRHSSYGGSLESIDYHKQQRILRTANHYLYTHSWAQQYPCRFDVVLIQGHLTAPQICWLTDAFRNETFKD
>NZ_AP014633.1|WP_045473993.1|1573432_1574152_-|ABC-transporter-ATP-binding-protein
MTVIQFKDVCKDYRIHRILDHIDLQIEQGEFFGLVGVNGAGKTTLIKSLLDLCEIEQGDIYLFGVPHTTYNARTHLSFLPEHFIPPYYLTGQNFLTYIARLQGQTFNLARAHEICCTLDFAVTALNQPVQDYSKGMAQKLGLIASILSNKSLLVWDEPMSGLDPKARAYLKNYLVNLKGIGKTLFFSTHLLPDVEALCDRMAILHEGRLKFVGTPAECCRLFATPNLEQAYLNCIEQHE
>NZ_AP014633.1|WP_052491815.1|1574239_1574923_-|hypothetical-protein
MDRPGKRGEEISWFRKIFGIPQPTPTVKPGTQPTEPGRFLTSFDRNHPTLLQQLQEATRYRGVIEDAARRYRLQPAVLCGIGSRESQWGIALRPPGPDGRGDFSQRRPRGDRYTPEPPDGPGYGRGLMQIDYDWHEFARTGNWQNPRENIMYACTVLEQARQFFQSSGINLTEEQLLRAVIAAYNGGATATLQAIEVGQDIDYNTTGQDYSRDVLDRSGWFQLHGWR
>NZ_AP014633.1|WP_052491816.1|1574988_1575573_-|hypothetical-protein
MILKNNLVYRLGIIITILWVVSCTTIPTTPQQTCSVADPKLQGHYQGDCQNGKAHGSGLAIGKDKYEGEFVQGLPQGKGTYTWADGERFVGSFDKGIPQIPHSGCYVADLRLRGRYQGACQNGKAQGRGKATGIDTYEGEFSNGLAHGQGTYIWSNGDRYIGQFKAGQANGRGVMKYVDGKEEAGLWQNNELVN
>NZ_AP014633.1|WP_052491817.1|1575874_1577884_+|transglycosylase-SLT-domain-containing-protein
MKLVFDWVMKRQYLLYKIIILSLISFNTFAEELTAQRWQFQYAYEAFKNNKLEKFQSLSTTLSDYPLYYYLQYLDISSKLSQHSSSSIVTFLKQYGNTYFGEELRRDWLKKLAQEQNWSTFLQNYTPNESTTLQCYYAQARLAMGQQIETALEETKKLWLVGDSQPSTCDLVFEYLYQSNLMNDALVWERIGLAMQNKKWSLAITLAKRLSPSEQAWFTVWQTMHYQPEQTLATFNYPDLPITRTIILHGINRLATSQFDLAYSYWEKLQRDYAFSVTQIGEMQRDLALASVKQHHPDALKWLAAINRQFLTEEASETRINLALKQQHWPALLDFITEMPLAQRNLLQWRYWLGRALEQTGQQPQAQKLFIELAKERDYYGFLAADRIGTEYQMKNQPIQYTPTDQAHLLKNQSIRAAYEFYQLSQLIAGEESWLLNARREWDYGIKQLLPEQQAIAAALANRWGWHDRAVLTSAKAGYYDDLEVRFPLAYHQDLTTAANQQNVDLAWVYGIVRQESAFMAKARSHAGALGLMQLMPATGRTIARQLGLKLKKVQDILAIDTNVSLGTSYLRQMLNRFGGNYMLATAAYNAGPGRAERWAGENSCLPPDIWVEMIPFNETRKYVRNVLFYTVVFESRLGQRPHSLRISLSPYNNCPFPEGESNKVARMK
>NZ_AP014633.1|WP_045473995.1|1577947_1578808_+|protease-HtpX
MKTVILFLATNLAVLVLLSIILQILGINQLHGLLIFALFIGMGGAFVSLAISKWSAKIATKAQVITQPNHPVEIRLIDMVRRQANAAGIGMPEVAIYDAVDINAFATGMNRNNALVAVSTGLLQAMEPDELEAVLAHEISHIANGDMVTMALIQGVINTFVIVLARIIGQLVDRVLFKNEEGPGLGYWMTSLVAEVILGLLASLIVMWFSRQREFRADAGSAQLVGAQKMIRALQRLKSAHDGQLPAQLFAFGIKGSKGSSLIQYWFMSHPPLDERIEALLKTVDS

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Crispr_ID: NZ_AP014633_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP014633_7

1776416-1777142

Orphan

Consensus_repeat	Method
GCAACTGAGTCAAAGCACTCAAGTCGGGGATAGGACC	CRT
TAAACCAAGGCCCTGCAACTGAGTCAAAGCACTCAAGTCGGGGATAGGACCGCTTAA	PILER-CR
TAGCTGATTATAAGACAAATCAAG	CRISPRCasFinder

10 spacers

The CRISPR arrays of NZ_AP014633_7

>merge|NZ_AP014633|7|1776416-1777142|CRT,PILER-CR,CRISPRCasFinder
CCAACTGAGTCAAAGCACTCAAGTCGGGGATAGTACCAGTTAGCTGATTAAAACTCAAATCAAGCCACCGCAACTGAGTCAAAGCACTCAAGTCGGGGATAGGACCAGTTAGCTGATTACTACCTAACGAAAGGGTTTGCAACTGAGTCAATGCACTCAAGTCAGGGATAGGACCGCTTAGCTGATTATCCCTTAACACAAGGCCCTGCAACTGAGTCAAAGCACTCAAGTTGGGGATAGGACCGCTTAAGTGATTACTTTCTAAACCAAGGCCCTGCAACTGAGTCAAAGCACTCAAGTCGGGGATAGGACCGCTTAACTGATTACTTCCTAAACCAAGGCCCTGCAACTGAGTCAAAGCACTCAAGTCGGGGATAGGACCGCTTAACTGATTACTTCCTAAACCAAGGCCCTGCAACTGAGTCAAAGCACTCAAGTCGGGGATAGGACCGTCTAGATGATTTAAATACAAATCAAGCTTTCGCAACTGAGTCAAAGCACTCAAATCGGGGATAGAACCAGTTAGCCAATTACCATCCAACACAAGGTGCTGCAACTGAGTCAAAGCACTCAAGTCAGGGATAGGACCAGTTAGCTGATTATAAGACAAATCAAGGGACTGTAACTGAGTCAACGCACTCAAGTCGGGGATAGGACCGTCTAGATGATTATAAGACAAATCAAGCTTTCGCAACTGAGTCAACGCACTCAAGTCGGGGATAGAACC

>NZ_AP014633|7|3|1776416-1777142|CRT
CCAACTGAGTCAAAGCACTCAAGTCGGGGATAGTACC	AGTTAGCTGATTAAAACTCAAATCAAGCCACC
GCAACTGAGTCAAAGCACTCAAGTCGGGGATAGGACC	AGTTAGCTGATTACTACCTAACGAAAGGGTTT
GCAACTGAGTCAATGCACTCAAGTCAGGGATAGGACC	GCTTAGCTGATTATCCCTTAACACAAGGCCCT
GCAACTGAGTCAAAGCACTCAAGTTGGGGATAGGACC	GCTTAAGTGATTACTTTCTAAACCAAGGCCCT
GCAACTGAGTCAAAGCACTCAAGTCGGGGATAGGACC	GCTTAACTGATTACTTCCTAAACCAAGGCCCT
GCAACTGAGTCAAAGCACTCAAGTCGGGGATAGGACC	GCTTAACTGATTACTTCCTAAACCAAGGCCCT
GCAACTGAGTCAAAGCACTCAAGTCGGGGATAGGACC	GTCTAGATGATTTAAATACAAATCAAGCTTTC
GCAACTGAGTCAAAGCACTCAAATCGGGGATAGAACC	AGTTAGCCAATTACCATCCAACACAAGGTGCT
GCAACTGAGTCAAAGCACTCAAGTCAGGGATAGGACC	AGTTAGCTGATTATAAGACAAATCAAGGGACT
GTAACTGAGTCAACGCACTCAAGTCGGGGATAGGACC	GTCTAGATGATTATAAGACAAATCAAGCTTTC
GCAACTGAGTCAACGCACTCAAGTCGGGGATAGAACC

>NZ_AP014633|7|5|1776614-1776867|PILER-CR
CAAGGCCCTGCAACTGAGTCAAAGCACTCAAGTTGGGGATAGGACCGCTTAAGTGAT	TACTTTCTAAAC
CAAGGCCCTGCAACTGAGTCAAAGCACTCAAGTCGGGGATAGGACCGCTTAACTGAT	TACTTCCTAAAC
CAAGGCCCTGCAACTGAGTCAAAGCACTCAAGTCGGGGATAGGACCGCTTAACTGAT	TACTTCCTAAAC
CAAGGCCCTGCAACTGAGTCAAAGCACTCAAGTCGGGGATAGGACCG

>NZ_AP014633|7|7|1777008-1777100|CRISPRCasFinder
TAGCTGATTATAAGACAAATCAAG	GGACTGTAACTGAGTCAACGCACTCAAGTCGGGGATAGGACCGTC
TAGATGATTATAAGACAAATCAAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP014633.1\|WP_052491842.1\|1782841_1783822_+\|prenyltransferase	unknown	unknown	gnl\|CDD\|260125
NZ_AP014633.1\|WP_045474258.1\|1780978_1782607_+\|chaperonin-GroEL	unknown	unknown	gnl\|CDD\|234573
NZ_AP014633.1\|WP_045474236.1\|1761504_1762065_-\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|99749
NZ_AP014633.1\|WP_083942504.1\|1760354_1761491_+\|radical-SAM-protein	unknown	unknown	gnl\|CDD\|275125
NZ_AP014633.1\|WP_052491840.1\|1770026_1772939_+\|DEAD/DEAH-box-helicase	unknown	unknown	gnl\|CDD\|350679
NZ_AP014633.1\|WP_045474248.1\|1766071_1769323_+\|efflux-RND-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|223911
NZ_AP014633.1\|WP_045474268.1\|1786676_1788890_-\|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|223394
NZ_AP014633.1\|WP_045474263.1\|1784716_1785052_+\|Grx4-family-monothiol-glutaredoxin	unknown	unknown	gnl\|CDD\|188046
NZ_AP014633.1\|WP_045479322.1\|1763443_1763974_-\|L,D-transpeptidase	unknown	unknown	gnl\|CDD\|341130
NZ_AP014633.1\|WP_052491841.1\|1779057_1780506_+\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|224137
NZ_AP014633.1\|WP_045474260.1\|1784029_1784266_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014633.1\|WP_083942505.1\|1789519_1791265_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366375
NZ_AP014633.1\|WP_045474256.1\|1780638_1780929_+\|co-chaperone-GroES	unknown	unknown	gnl\|CDD\|178988
NZ_AP014633.1\|WP_045474265.1\|1785132_1786410_+\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|180392
NZ_AP014633.1\|WP_045474241.1\|1763134_1763380_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014633.1\|WP_045474250.1\|1769539_1769908_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014633.1\|WP_045474238.1\|1762081_1762810_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014633.1\|WP_045474254.1\|1778858_1779068_+\|sulfur-carrier-protein-ThiS	unknown	unknown	gnl\|CDD\|236998
NZ_AP014633.1\|WP_045474244.1\|1764478_1765093_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_AP014633.1\|WP_045474246.1\|1765074_1766100_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|273776

Protein	Function_ID	Function_description	E-value
NZ_AP014633.1\|WP_052491842.1\|1782841_1783822_+\|prenyltransferase	gnl\|CDD\|260125	cd13962, PT_UbiA_UBIAD1, 1,4-Dihydroxy-2-naphthoate octaprenyltransferase. Human UBIAD1 is an enzyme involved in the synthesis of MK-4. Menaquinones (MKs, also called bacterial forms) are one of the two forms of natural vitamin K, the other being the plant form, phylloquinone (PK). All forms of vitamin K have a 2-methyl-1,4-naphthoquinone (menadione; K3) ring structure in common. At the 3-position of the ring, PK has a phytyl side chain while MKs have several repeating prenyl units. Prenyltransferases (PTs) catalyze the regioselective transfer of prenyl moieties onto a wide variety of substrates and play an important role in many biosynthetic pathways.	3.64725e-72
NZ_AP014633.1\|WP_045474258.1\|1780978_1782607_+\|chaperonin-GroEL	gnl\|CDD\|234573	PRK00013, groEL, chaperonin GroEL; Reviewed.	0
NZ_AP014633.1\|WP_045474236.1\|1761504_1762065_-\|Uma2-family-endonuclease	gnl\|CDD\|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	8.3551e-31
NZ_AP014633.1\|WP_083942504.1\|1760354_1761491_+\|radical-SAM-protein	gnl\|CDD\|275125	TIGR04321, hypothetical_protein_TresaDRAFT_0163, spiro-SPASM protein. This three-domain protein is restricted to the spirochetes and widely distributed (excepting Borrelia). It has a conserved C-terminal SPASM domain, a 4Fe-4S binding domain shared by a number of peptide-modifying and heme-modifying radical SAM proteins. It has a central radical SAM domain, although half the members have lost the signature 4Fe-4S-binding Cys residues, fail to register with the radical SAM domain definition of pfam04055, and must be considered pseudo-SAM proteins. PSI-BLAST shows a relationship between the N-terminal domain and various predicted glycosyltransferases (e.g. Bacillus subtilis SpsF) and cytidyltransferases. In some Treponema species, this protein appears to split into two tandem genes.	5.20646e-08
NZ_AP014633.1\|WP_052491840.1\|1770026_1772939_+\|DEAD/DEAH-box-helicase	gnl\|CDD\|350679	cd17921, DEXHc_Ski2, DEXH-box helicase domain of DEAD-like helicase Ski2 family proteins. Ski2-like RNA helicases play an important role in RNA degradation, processing, and splicing pathways. They belong to the type II DEAD box helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	5.8762e-39
NZ_AP014633.1\|WP_045474254.1\|1778858_1779068_+\|sulfur-carrier-protein-ThiS	gnl\|CDD\|236998	PRK11840, PRK11840, bifunctional sulfur carrier protein/thiazole synthase protein; Provisional.	9.97812e-23
NZ_AP014633.1\|WP_045474268.1\|1786676_1788890_-\|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase	gnl\|CDD\|223394	COG0317, SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription].	0
NZ_AP014633.1\|WP_045474263.1\|1784716_1785052_+\|Grx4-family-monothiol-glutaredoxin	gnl\|CDD\|188046	TIGR00365, TIGR00365, monothiol glutaredoxin, Grx4 family. The gene for the member of this glutaredoxin family in E. coli, originally designated ydhD, is now designated grxD. Its protein, Grx4, is a monothiol glutaredoxin similar to Grx5 of yeast, which is involved in iron-sulfur cluster formation. [Energy metabolism, Electron transport].	6.22519e-68
NZ_AP014633.1\|WP_045479322.1\|1763443_1763974_-\|L,D-transpeptidase	gnl\|CDD\|341130	cd16913, YkuD_like, L,D-transpeptidases/carboxypeptidases similar to Bacillus YkuD. Members of the YkuD-like family of proteins are found in a range of bacteria. The best studied member Bacillus YkuD has been shown to act as an L,D-transpeptidase that gives rise to an alternative pathway for peptidoglycan cross-linking. Another member Helicobacter pylori Csd6 functions as an L,D-carboxypeptidase and regulates helical cell shape and motility. The conserved region contains a conserved histidine and cysteine, with the cysteine thought to be an active site residue.	4.1786e-27
NZ_AP014633.1\|WP_052491841.1\|1779057_1780506_+\|glycosyltransferase-family-2-protein	gnl\|CDD\|224137	COG1216, COG1216, Predicted glycosyltransferases [General function prediction only].	8.52036e-45
NZ_AP014633.1\|WP_083942505.1\|1789519_1791265_+\|hypothetical-protein	gnl\|CDD\|366375	pfam00931, NB-ARC, NB-ARC domain.	4.78277e-11
NZ_AP014633.1\|WP_045474256.1\|1780638_1780929_+\|co-chaperone-GroES	gnl\|CDD\|178988	PRK00364, groES, co-chaperonin GroES; Reviewed.	1.40818e-51
NZ_AP014633.1\|WP_045474265.1\|1785132_1786410_+\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|180392	PRK06084, PRK06084, bifunctional O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase.	0
NZ_AP014633.1\|WP_045474248.1\|1766071_1769323_+\|efflux-RND-transporter-permease-subunit	gnl\|CDD\|223911	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms].	0
NZ_AP014633.1\|WP_045474244.1\|1764478_1765093_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	5.17776e-14
NZ_AP014633.1\|WP_045474246.1\|1765074_1766100_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	1.94703e-47

>NZ_AP014633.1|WP_052491840.1|1770026_1772939_+|DEAD/DEAH-box-helicase
MAKLCAEVTATYKNSAMRTVLQDFLASLDKWGKIALERYIRINYDEKRVLIWPSQRRGIERLVQGNSFALCTPTGSGKTTVAKLAIIQSLFNQANPNFDEKIAPLAIYLVSSRALAVEVEIKFNRVFRRIHKPNVQVTGLYGGTDWGPTDAWLTTEEPTVLICTYEKAEALIRFLGVPFLYRVSLIIVDEAHSVQFNGQSDQLQQSESRSLRLESLINRLLTHLERKSRVIALSAVAAGAEDTIAQWITGHPEVQVTQIHYRSTRQLVGRLECLPHREFQIYYDLLDNASLQFEDSDHKGSPFVPKPFPACPPAPNLEEDGIEKQLRPYLFWAAMHLAAPDDQGQQRAVLISVTQGIWGYAKDLLQLIEETWNNIEEPTLFKELSNKENIEKPTFFKEPTDKNKLNLWRKCLQACKDYYSERSREYRLLQKGIVVHHGKMPGLMARLLIEVIQERIVHLVLATSTLSEGVNLPFETVLIPTLRRGQKNISVQEFNNLIGRTGRPGFGTEGRGLVLLHPQSSEWNINNSRDLYFKFIKELKERKAITDDTNAKSPLAELLILIKEKWQELTKSTDENEFMMWLETTAPLTLEEQEISPAVESLDTLDSILLSNLVEIEQISNSILTSDELEDALRRVWQKSYAYYATQQEIKWENIFIRRGKSLNTNIYPNFTERKRLYHTNLPPRAGKQLLNKYQDIVNLLKQGEEYALYDDDKKFEYISTVVNSIKELPKFNFSKEEIGKSSWKQILRWWLNPSKSKWPSETKVSDWHQYISQNLIYRFNWGLGSVIALAMDDAHKDIIIPLSFSLDDWPQTGLPWIVFWLKELITWGTLEPVAAYLLAKGIKFTRADAQTAAQEYYKQVQAQPPNEQLDARTIRNWTIDFYKDKKIANDFKKLSKDIKVELLRDFSKTTKQFFRVIPIEKDNKVCWLDPGGFPLAICDKTNGWDSNYLNIFDFKLDPIKKLVLTESYI
>NZ_AP014633.1|WP_045474250.1|1769539_1769908_+|hypothetical-protein
MGIFLGIGGLAGCVIGLIITVILSRIGLYITTEMAKKQDWVWWYFTVVFVVTLPTLVFVGNDIISYSYVAKPGQDYDIAMKIFFLKGLGLCACPGLAAFFAAFLTAFIALLLPKKSINNQQS
>NZ_AP014633.1|WP_045474248.1|1766071_1769323_+|efflux-RND-transporter-permease-subunit
MESELETSLDTRFNLAAWLTRQFIESRLTVLLLIAVLLLGGLGLLLTPREENPQIVVPVAEISVPFPNALPSEVEQLLLTPLESRLIAIAGVKHVYGTASEGLAKVQVEFEVGENKTDAFVRLYDQMLRYRSVLPPGTGEPQIQMIDVDDVPIFVVTLAADEYHRQELTRIAERLGEKLLSVPGVGQINQVGTWPKAVRVIIKPGQLQALGLSLNDVEQAIQATHINGLIDTRIRQDRVVTLYLDNQLTHLDDLKNSVVSATQGKILRLGEIADITDQPSLIQNTYSRFSFGRADARFEIFQGKQMTAIHLAVAKRPGVNAVSLTRALRERINLMQDTWLPKTIQVVITRDDGIKANNTVNTLIIHLTIAIGAVSVILSIFLGLRAALIVMLAIPLVFAVVMGMDWLYGPTLNRITLYALILALGMLVDDAIVVIENIHRHYQALPPGAQKNSKSYHAILATGEIGNPTTLATLAVVIVFLSLLMVTGMLGQYFYPMAFNVPVAMLASLLIAYTVTPWAARRFLVSPHSDQPIKIQQYYRLLLNTLLHHRLWRWLFFLLTLMIFGLSLLQPAWQFIRPQGVSGEVSYWGIPLAFLPKDDKNTFLITFHLPDNTPLENTDRVVREIETVLSNNPYVTHYQSFIGIPAVIDFNGQLRGSGANVGSQFAEIRVNLIDKHERNITSIDIVKQFRRVITPILQNYPQASIQLVEDPPGPPVRATLLAEIYGTDQPTLEALAKTVSIAFRQTWDMAEVWASIPTDITEYRLRVQPDKAAMAGVSVREVGQTLKDFVAGKLLGYLHVKDERHTVPIYLQVPESEPIEPEWLASAFIMSPDKQAIPLSSLVQVSLEQRPHPLFHQDGELVVYVGGELNASAPVYAILSLDARLDGMPVSDHENLHTTNLGLQPVAPNSLRGYRLHWAGELRLTLDAFRDMGLALGLALISIYLLLVGYYRSFLLPILVMVSVPLSLPGVFMGHWLLNQTFSAASMVGVIALAGIVVRNALLLIDFNKELRQKGFSVQAAASESGALRLRPILLTTLAIVLGTVIMIPDPVFGGLAISLIFGAVSSALFTVLVVPLLSVSYV
>NZ_AP014633.1|WP_045474246.1|1765074_1766100_+|efflux-RND-transporter-periplasmic-adaptor-subunit
MLWKQISCCFWLILNTGQAATIETIMAEIRPVPRFYEAPGRTIATQQMQLRATVNSFIRELAVREGDIVPKGTLLLALDDRNNMKNREEAQALIAAAQATLADATQDVQNFARLLTKNATSAERLRKAQLQQEQTRAALIQAQARLAVLNHEREYLQLTSPFKARVVERLVTLGDLVTVGTPLLRLEALDSIEFSAELPAIWIESIQVGQPVLIVLSGVSAPFIGQVTIIVKAVNPVTQTCTVKLRLGDATDVLTGVTGQAHFIIAKESLLLIPESTMVERAGIIGVFRLESQQVARFAAIRIGRSWQTYRSVIAGLRAGDKLINKPSAELRDGERVGNQP
>NZ_AP014633.1|WP_045474244.1|1764478_1765093_+|TetR/AcrR-family-transcriptional-regulator
MAKAKFSASHSAVEAILTAAIPLFAQAGFSGVAMRQVAQAVGISIATLYHHFPDKSTLYLKTIEATFADKAEGMAAVLAETGTPEQRLQKFVLRFTEMMSQDSYFRRLLQRELLDGDETRLRLLASQVFKAQFLNIAKLAQELAPGCDPHLMAISIAGLVLFHLEMTPLRQFLPGGCPEHNQPDIIARHVTALLLGGVPCCGNK
>NZ_AP014633.1|WP_045479322.1|1763443_1763974_-|L,D-transpeptidase
MLESACIIVDISAQKLSLYRSCKLLENKLVESSFIVSYPVSTSKYGIGNQARSNKTPLGLHRIEQKIGANVPSGMIFKARQSTGKIAEINQAGAGDLVTTRIMWLTGLEPNKNQGAGIDSYQRYIYIHGTVEENKIGQPASHGCIRMNNLDVIELFDQVKEGTLVDIREKIAVVTQ
>NZ_AP014633.1|WP_045474241.1|1763134_1763380_+|hypothetical-protein
MNVEPSSELQLALNAFLNTTTLEEAYQVIQQHPILLTDQADLFLSSIISTARKQSHEETAMALDERRDFIRSVRAENESNH
>NZ_AP014633.1|WP_045474238.1|1762081_1762810_-|hypothetical-protein
MAITTPPPEKPGDRGIPLIPNPQLPQMMECGAAISKGQMEQFVNSFQQSTRRWEVVVYPALFAFVVLAGYGFFLIYSLTGDMSSMARSMDPKMGDHMESMSKSIVTLSKQIEIMSQQIQVMTYTMTNISDKLDTLPVMLQHVGKMDNSMANMVTSISHMDNMMTQMDQSMTHMDKSIAQMDKSIAQMDKSIATMDDSMRTMDQSMRVITATTDQMRRDLTLMSHNISNFSRPMSFANSFMPW
>NZ_AP014633.1|WP_045474236.1|1761504_1762065_-|Uma2-family-endonuclease
MTIIPQKHRFNVSDWHQLGEKNFFLPDFRVELIEGEIIDMVPIGSSHGGRVKWLTQFFVTQLVGSAIVSVQDPVQLGNFSEPQPDLMILRPELHFYSKRHPTPADVLLLIEVSESTLHYDRHTKVPLYARHGIIETWIVNLEQNCIEVYLNPQELGYQEKHIFQCGEVIVPSQLAHIKVAVAEVLG
>NZ_AP014633.1|WP_083942504.1|1760354_1761491_+|radical-SAM-protein
MLHTIKRQIKKHFGHHINPDVVILTRKYVDMIEINFNALLGRHFLPHPRQKIEIETSGRCNLSCRFCAYSKKITAKVVMPMNLFQEVVEQAAEMGFSEIGLTPMTGEVFMDKGIIEKMHYLDAHPQIKSYYFFTNFVVPSEQTIKELFNLRKLKFIHISLYGHDEKSFCNLTQATTKEYHRLVNNLNYLYDLYNEKRSFILRMGWRTMPSFFKLEQSSPTSELQEIFLKFQTYHKIKSNNTLLYNNWGGEITQADVQDTGLRINDGTQVYRKGLCSVIFRFSGILADGRVSACVCRDVKGSLVVGDLRKESLSYVLSLNNPLYANLIQEQLESKFRPVCLTCDFYNSFYQKMRMNASIKAYYKFDFVKTLLNQPPSEK
>NZ_AP014633.1|WP_045474254.1|1778858_1779068_+|sulfur-carrier-protein-ThiS
MDIFLNGEIQPVEENCTIAALIKKLDLENKRLAVEVNLEIVPRSQFEQQVLFAGDRVEIVQAIGGGNGF
>NZ_AP014633.1|WP_052491841.1|1779057_1780506_+|glycosyltransferase-family-2-protein
MVSESTIRSNTLPTPAPSILIIIVTWNKKQYVLELLASLSTLDYPVTALDILVVDNASQDGTAAAIAASYPQVNVLCNPENLGGTGGFNTGLQWAFAQSPERYRYLWLLDNDVVVHRRALTELVAILEAKADVAVVGSTMMQLDYPWRINEMGAFLNRGLGLLVLHRHLETIPLWQGHSLAELLTGDTDLTQYLIHCQPTMDVDYVAAASLLIRSTVAKQAGLWRDYFIHFDDVEWCLRIRARGYRVVVAARSLIWHLSAAAKVPTWVLYYDNRNILDLLATHGADSQHLRRIIQYIYKKAVYYYLIGKPDLAQLHYQAVADFKAKRYGKQAVQLTHHYQNNTHIQPVFLDPAIKRILIPWTVNLQATGIQEALVQAQLKRPELQVDCLIPPENPVVYQLPHAHFLPPLSALKIFRWLTYWRLRGCYDLVMQSDYQIIIGLSWLQADLLFINDEGFSRRPPPQLKQVWQATIRWLQTKKRNF
>NZ_AP014633.1|WP_045474256.1|1780638_1780929_+|co-chaperone-GroES
MQIRPLHDRVIVKRMEEERKTPGGIVIPDSATEKPIRGKVLAVGKGKILENGQVRPLDVKVNDVVLFGKYSGTEVKMDGEELLVMREEDIMGIIEN
>NZ_AP014633.1|WP_045474258.1|1780978_1782607_+|chaperonin-GroEL
MAAKEVRFSDEARQQMMRGVNILANAVKITLGPKGRNVVLEKSFGSPTVTKDGVSVAKEIELENKFENMGAQMVKEVASRTSDTAGDGTTTATVLAQSILTEGMKSVAAGMNPMDLKRGIDKAVIVAVEELKKLSKPCTDDKAIAQVGTISANADEVIGDIIAKAMNKVGKEGVITVEEGSGLDNELDVVEGMQFDRGYLSPYFVNNQQTMTAELENPLILLHDKKISNIREMLPILEGAAKAGRSLLIVAEDVEGEALATLVVNTIRGVVKVAAVKAPGFGDRRKAMLQDIAILSGGTVISEEVGLSLEKAGLDDLGHAKRITISKENTTIIDGAGKTSEIEARVKQIRAQIEEATSDYDKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALVRALKAIQGLKGVNRDQDTGIKIALRAMEEPLRQIVANSGQEPSVILNKVAEGQGNFGYNAATEEFGDMVAMGILDPTKVTRSALQNAASIAGLMITTEAMVAELPKREEHSHGPAGGGMDMM
>NZ_AP014633.1|WP_052491842.1|1782841_1783822_+|prenyltransferase
MPSSRHCNENCILASVSIVKKFMARKTITTWIMATRPQFFTVIILPILLGTAIAWHSLGVFSLAYFILSLVAGIFSHAGINVLNDYFDHLNQSDDINLTPLTPFTGGSRFIQQGILSPQETYYYGWFLLTIAIIIGLLLVWIRGLPLLWIGLIGILSGYCYSAPPFSFHSRGLGEMLVGLNFGLLTVIGAYYVQTQTINGAATIAALPLSGLVTAILYINEFPDYFADKRVGKQNLVVRLGKVAACHLFVVLISFSFIIIAVGVIFQNLPFLSLVSWLALPLGFWAIKNLYIYYDNPPALIVAIKNTIWLHTVVSGILILAFIFPV
>NZ_AP014633.1|WP_045474260.1|1784029_1784266_+|hypothetical-protein
MTKREARAMVTRLGTRTKLISQKSAMSEAIDQEVKSVDQELDANMTAVRLLEQSIEKQKIHAPQIGYGLHGQRKSAKP
>NZ_AP014633.1|WP_045474263.1|1784716_1785052_+|Grx4-family-monothiol-glutaredoxin
MDVLERIKEKVENNPIVIFMKGTPQFPQCGFSSRAAQALQACGVEFTYVNVLDDPEIFQNLPRYANWPTFPQIYVNGELIGGCDIALELYQKGELKPMLEQAAHHRQPAKN
>NZ_AP014633.1|WP_045474265.1|1785132_1786410_+|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme
MKLETIAIHGGYSPEPTTKAVAVPIYQTTSYAFDNTQHGADLFDLKVPGNIYTRIMNPTTDVLEKRVAAMEGGIGALAFASGMAAITASIMTLAAQGDNVVTSSTLYGGTYNLFAHTLPQYGIDIRFADYLNIDSFAQLIDAKTKAIFCESIGNPLGNVVNFGALAQLAHHHGIPLIVDNTVPSPYLCRPFEHGADIIVHSLTKYMGGHGNSIGGIIVDSGKFPWSQQADKFSCFTIPDKSYHGVTYTDTFGAAAYIARARVVPLRNMGAALSPLNAFLILQGIETLPVRMDRICANALTVANYLKHHKQVLWVQYAGLNDSPSKALVDKYMSGRASGILSFGIQGGIIAGAKFIDALQLITRLVNIGDAKCLACHPASTTHRQLSAEELAKAGVTEDMVRLSIGLEHVDDILADIEQALSVATT
>NZ_AP014633.1|WP_045474268.1|1786676_1788890_-|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase
MVNTTNPLLISSTENPIALDAWIERITENYSVNDRQAIIDACSLTQAIHQTQSRASGETYLIHVVNVTDILAQLGLDTEVLVAALLHECVETKQLTLGEVERRFNPVVMQLVDGVARMRLIENLHEQSPPRVETENQTESLRKMLLAMAEDVRVVLIKLADRLHNMRVLRYLPVEKRRRMSRETLDLFAPLANRLGIWQIKWELEDLSLRYLEPDTYQNMAQLLDERRVDRENYIQTVMKILAEALQRTGIHAEVSGRPKHIYSIWRKMQRKGLTFNQIFDVRAVRVLVNTVSECYTALGIIHTKWQPIRGEFDDYIANPKSNNYQSLHTAVVGPEQKIFEVQIRTHEMHHHAELGIASHWRYKEEGSTLDKNFEKKISWLRQILQTGKEEEGDPSELLDRFKSEIIEDRVYVFSPTGQVIDLQQGSTPLDFAYSIHTQLGHCCRGAKINNRVVPLTYTLKNGDQVEILTSNEEKPSRDWLLTQAGYLKTSRARAKVRQWLKKQDLRQHISEGRVLLERVLRRLNIKNCNLEQLAQKFRFKSVDELLASLGRGDITTTQITATFNEQVFHTDSQIIPVIMESSRSKGGIYIKGVGGLLTQTARCCRPVPYDPIVGYITTGRGVVVHRRDCSNALRWQDEGNQRLIEVEWSEPLEEQNLVYPVDIEISAYDRIGLLRDICSIATSEKVNIITAHTYTNKMDNNVKMMFTLEVCNVEQLSRLLAKIDNLTNVMKVWRKN
>NZ_AP014633.1|WP_083942505.1|1789519_1791265_+|hypothetical-protein
MACNDFASMQSNKNDKLLRSLRSYIMSSEYTLEQEITLLEQDYILLTELQTELQQRLTIEEKNRPILQQKIADNDKEINEIKQKLEQLKAAAGLVPHPTSTLPPATLHNVPDLPAYLVINLLLFNELKAKLVIKPSLVEIAEGQKSPLLIQSPSGMGKSVIAAVLAHDTAIRRTFSDGIFWVHLGQHSDLMSCQIALIRALGEEVKHFLNPQAGTERLRQLCAKRNCLLILDDVWDVDEVLAFNGLGKYCQLVITTYDNTLLDFLLRSIPSIQGYVLTPLVEEQAIQFFLNCTGQQLSPVPMEVNTIARACDYLPLALKLIAALASNQPASVWNTLVDSLQNATTNEFPDTHPRTLMQAMQLNVDALGEQSEYYLALAVFVNYSAIPQKTVVMLWQYLYHLSADQADAFISKLVTRGLLQVETVSSNQCLSLHAFQYDYLYTSAEVEKLHHHLLAAYRRHCLHGWSNGPNDGYFFEYLCTHLLAAERTTELKSLLLDFDWLYTKLQRCPLHKLLSDYDLLPDRELETIKKVLSHWVNGLQPDREQLANYLLSQLVDQPAAEIQKLLNQLKEISSEWQPPLS

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Crispr_ID: NZ_AP014633_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP014633_8

2930869-2930968

Orphan

Consensus_repeat	Method
TCCTAGATTGAAAATACCTCCTCCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP014633_8

>merge|NZ_AP014633|8|2930869-2930968|CRISPRCasFinder
TCCTAGATTGAAAATACCTCCTCCGAACCAATCAGCCTTATTCCCAGAGATCTTGCTCTGTTTAAGAGTAAGTTCTCCTCGATTGAAAATACCTCCTCCG

>NZ_AP014633|8|8|2930869-2930968|CRISPRCasFinder
TCCTAGATTGAAAATACCTCCTCCG	AACCAATCAGCCTTATTCCCAGAGATCTTGCTCTGTTTAAGAGTAAGTTC
TCCTCGATTGAAAATACCTCCTCCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP014633.1\|WP_052491979.1\|2920571_2920982_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|379154
NZ_AP014633.1\|WP_045475848.1\|2935274_2935898_+\|16S-rRNA-(guanine(527)-N(7))-methyltransferase-RsmG	unknown	unknown	gnl\|CDD\|234637
NZ_AP014633.1\|WP_045475832.1\|2926359_2927064_+\|proteobacterial-dedicated-sortase-system-response-regulator	unknown	unknown	gnl\|CDD\|163499
NZ_AP014633.1\|WP_052491978.1\|2920223_2920478_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014633.1\|WP_052491980.1\|2922235_2923684_-\|peptidase-S8	unknown	unknown	gnl\|CDD\|173810
NZ_AP014633.1\|WP_052491982.1\|2937325_2937568_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014633.1\|WP_045475838.1\|2931722_2932040_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014633.1\|WP_083942715.1\|2921032_2921179_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377060
NZ_AP014633.1\|WP_045475828.1\|2921198_2921597_-\|DDE-type-integrase/transposase/recombinase	unknown	unknown	gnl\|CDD\|281403
NZ_AP014633.1\|WP_045475834.1\|2927075_2929193_+\|proteobacterial-dedicated-sortase-system-histidine-kinase	unknown	unknown	gnl\|CDD\|163497
NZ_AP014633.1\|WP_045475843.1\|2933024_2933720_+\|electron-transport-complex-subunit-E	unknown	unknown	gnl\|CDD\|237091
NZ_AP014633.1\|WP_045475841.1\|2932462_2932906_+\|DUF29-domain-containing-protein	unknown	unknown	gnl\|CDD\|366774
NZ_AP014633.1\|WP_045475851.1\|2937847_2938072_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014633.1\|WP_083942571.1\|2923784_2925152_+\|DUF945-family-protein	unknown	unknown	gnl\|CDD\|377603
NZ_AP014633.1\|WP_045475847.1\|2934614_2935271_+\|endonuclease-III	unknown	unknown	gnl\|CDD\|223255
NZ_AP014633.1\|WP_045475836.1\|2929298_2929547_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014633.1\|WP_045475849.1\|2936002_2937142_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238001
NZ_AP014633.1\|WP_045475840.1\|2932026_2932398_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014633.1\|WP_045475845.1\|2933784_2934561_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|369777
NZ_AP014633.1\|WP_083942572.1\|2925174_2925756_-\|sortase	unknown	unknown	gnl\|CDD\|163496

Protein	Function_ID	Function_description	E-value
NZ_AP014633.1\|WP_052491979.1\|2920571_2920982_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|379154	pfam13384, HTH_23, Homeodomain-like domain.	4.16243e-05
NZ_AP014633.1\|WP_045475848.1\|2935274_2935898_+\|16S-rRNA-(guanine(527)-N(7))-methyltransferase-RsmG	gnl\|CDD\|234637	PRK00107, gidB, 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG.	3.15246e-71
NZ_AP014633.1\|WP_045475832.1\|2926359_2927064_+\|proteobacterial-dedicated-sortase-system-response-regulator	gnl\|CDD\|163499	TIGR03787, marine_sort_RR, proteobacterial dedicated sortase system response regulator. This model describes a family of DNA-binding response regulator proteins, associated with an adjacent histidine kinase (TIGR03785) to form a two-component system. This system co-occurs with, and often is adjacent to, a proteobacterial variant form of the protein sorting transpeptidase called sortase (TIGR03784), and a single target protein for the sortase. We give this protein the gene symbol pdsR, for Proteobacterial Dedicated Sortase system Response regulator.	2.80927e-140
NZ_AP014633.1\|WP_052491980.1\|2922235_2923684_-\|peptidase-S8	gnl\|CDD\|173810	cd07484, Peptidases_S8_Thermitase_like, Peptidase S8 family domain in Thermitase-like proteins. Thermitase is a non-specific, trypsin-related serine protease with a very high specific activity. It contains a subtilisin like domain. The tertiary structure of thermitase is similar to that of subtilisin BPN'. It contains a Asp/His/Ser catalytic triad. Members of the peptidases S8 (subtilisin and kexin) and S53 (sedolisin) clan include endopeptidases and exopeptidases. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. Serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin. The serine residue here is the nucleophilic equivalent of the serine residue in the S8 family, while glutamic acid has the same role here as the histidine base. However, the aspartic acid residue that acts as an electrophile is quite different. In S53 the it follows glutamic acid, while in S8 it precedes histidine. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. There is a great diversity in the characteristics of their members: some contain disulfide bonds, some are intracellular while others are extracellular, some function at extreme temperatures, and others at high or low pH values.	5.2099e-105
NZ_AP014633.1\|WP_083942715.1\|2921032_2921179_-\|hypothetical-protein	gnl\|CDD\|377060	pfam03534, SpvB, Salmonella virulence plasmid 65kDa B protein.	1.03595e-16
NZ_AP014633.1\|WP_045475828.1\|2921198_2921597_-\|DDE-type-integrase/transposase/recombinase	gnl\|CDD\|281403	pfam03400, DDE_Tnp_IS1, IS1 transposase. Transposase proteins are necessary for efficient DNA transposition. This family represents bacterial IS1 transposases.	6.05529e-11
NZ_AP014633.1\|WP_045475834.1\|2927075_2929193_+\|proteobacterial-dedicated-sortase-system-histidine-kinase	gnl\|CDD\|163497	TIGR03785, marine_sort_HK, proteobacterial dedicated sortase system histidine kinase. This histidine kinase protein is paired with an adjacent response regulator (TIGR03787) gene. It co-occurs with a variant sortase enzyme (TIGR03784), usually in the same gene neighborhood, in proteobacterial species most of which are marine, and with an LPXTG motif-containing sortase target conserved protein (TIGR03788). Sortases and LPXTG proteins are far more common in Gram-positive bacteria, where sortase systems mediate attachment to the cell wall or cross-linking of pilin structures. We give this predicted sensor histidine kinase the gene symbol psdS, for Proteobacterial Dedicated Sortase system Sensor histidine kinase.	0
NZ_AP014633.1\|WP_045475843.1\|2933024_2933720_+\|electron-transport-complex-subunit-E	gnl\|CDD\|237091	PRK12405, PRK12405, electron transport complex RsxE subunit; Provisional.	4.23472e-111
NZ_AP014633.1\|WP_045475841.1\|2932462_2932906_+\|DUF29-domain-containing-protein	gnl\|CDD\|366774	pfam01724, DUF29, Domain of unknown function DUF29. This family consists of various hypothetical proteins from cyanobacteria, none of which are functionally described. The aligned region is approximately 120-140 amino acids long corresponding to almost the entire length of the proteins in the family. Structure 3fcn is a small protein that has a novel all-alpha fold. The N-terminal helical hairpin is likely to function as a dimerization module. This protein is a member of PFam family PF01724. The function of this protein is unknown. One protein sequence contains a fusion of this protein and a DnaB domain, suggesting a possible role in DNA helicase activity (hypothetical). Dali hits have low Z and high rmsd, suggesting probably only topological similarities (not functional relevance) (details derived from TOPSAN). The family has several highly conserved sequence motifs, including YD/ExD, DxxNVxEEIE, and CPY/F/W, as well as conserved tryptophans.	2.41775e-68
NZ_AP014633.1\|WP_083942571.1\|2923784_2925152_+\|DUF945-family-protein	gnl\|CDD\|377603	pfam06097, DUF945, Bacterial protein of unknown function (DUF945). This family consists of several hypothetical bacterial proteins of unknown function.	1.59604e-36
NZ_AP014633.1\|WP_045475847.1\|2934614_2935271_+\|endonuclease-III	gnl\|CDD\|223255	COG0177, Nth, Predicted EndoIII-related endonuclease [DNA replication, recombination, and repair].	1.22549e-110
NZ_AP014633.1\|WP_045475849.1\|2936002_2937142_+\|hypothetical-protein	gnl\|CDD\|238001	cd00041, CUB, CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.	9.10803e-07
NZ_AP014633.1\|WP_045475845.1\|2933784_2934561_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|369777	pfam08241, Methyltransf_11, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	1.67357e-13
NZ_AP014633.1\|WP_083942572.1\|2925174_2925756_-\|sortase	gnl\|CDD\|163496	TIGR03784, marine_sortase, sortase, marine proteobacterial type. Members of this protein family are sortase enzymes, cysteine transpeptidases involved in protein sorting activities. Members of this family tend to be found in proteobacteria, rather than in Gram-positive bacteria where sortases attach proteins to the Gram-positive cell wall or participate in pilin cross-linking. Many species with this sortase appear to contain a signal target sequence, a protein with a Vault protein inter-alpha-trypsin domain (pfam08487) and a von Willebrand factor type A domain (pfam00092), encoded by an adjacent gene. These sortases are designated subfamily 6 according to Comfort and Clubb (2004).	3.22675e-44

>NZ_AP014633.1|WP_045475836.1|2929298_2929547_-|hypothetical-protein
MLYHDIVPLIQELNHADKLRLMQLLMNQILLEEGLEYSKVDTEHWLRQPHVQVSLDRAIAWAEANPPQETDLEQLAVRINTP
>NZ_AP014633.1|WP_045475834.1|2927075_2929193_+|proteobacterial-dedicated-sortase-system-histidine-kinase
MLTIRSKVLLLSLTLFSIPYVGYEYVREMEKYLRDNLETSLEDTARALANVLNDRPSLFSRKLVDIVREEGLNAHVLNTPIKLDGNIDDWAGYLEQAGDYAEKHILKNSGTYSPNSLSFKHILGKYHNHLYALFIVHDDKIVYRSAASLHLDRSDHLQIVMQEPNRQFYRYIIAPQAPGWVSAYKVSTRDSYLQTQPETRIQGMWQETTTGYILELRIPLSKIGDRLGFAIADVDDPSHQIKTVIGTSAIQNLETVGKVFIPSPEIERIIRSLSDTPGRRVWVLDKQRRVLATSGELQREITHHPLNALYSLLLPPVSEDFKDDLARASRLEGEEVNSALEGKARTRWRSTLDGQAVIVSAAHPVWNQHQVIGAVVVEETSNRIQSVQRQAIANLFNKTLIVFSIITLLLLAFATRLSVRLRSLRNQAEKAIDINGRVTTTKIGFFSKDEIGDLSRSFSLILEKLSQYNTYLEGMASRLSHELRTPIAVVRSSLENLEQEFEQTGTSGESHIYIERAKQGIARLNTIITRLSEATRLEQALQTVEREVFDLTELVSSCVEGYRLAYPEQNFQAEISSTPLTLEGAPDLIAQMLDKLISNAVDFSEPQIPIKVKLFSEGKQAHLDILNRGQTLPAEMPERLFESMVSLRPQSMGKKEPHLGLGLYMVRLIVGYHGGQVRADNNPEGTGALFTVLLPIRSTEMVLAN
>NZ_AP014633.1|WP_045475832.1|2926359_2927064_+|proteobacterial-dedicated-sortase-system-response-regulator
MGRRIAIVEDEPAIRENYAAVLRRQGYEVNTYTNRAEAMQAFHTRLPDLVLLDIGLEDEVEGGFDLCRDLRTLSHYLPIIFLTAHDSEFDTVSGLRLGADDYLTKDISMPHLLARIAALFRRIEALRTPPLAENVITRGSLLIDSYRLTATWRGVAVELTLTEFWIVHALARFPGHVKHREQLMQEANVLVDDSTITSHIKRIRKKFAHIDPKFVAIETVYGMGYRWNIDTVNC
>NZ_AP014633.1|WP_083942572.1|2925174_2925756_-|sortase
MKTQLRWGYLALVIVVTMTAWQFSQGNVVYAQAWLAQGLLHTAWVRTQASGQQVKPWPWARTWPLALLSVPRINTEQIILSHASEGISSFALRHTENSVLPGEIGNSVLNVHRDNYFSFLRMLKPGDMIILESLRNGRWYYQISAIYIVYKTDTSLIEPSLNRRLTLISCYPCTIEDDRRYVVVAEEVKRITS
>NZ_AP014633.1|WP_083942571.1|2923784_2925152_+|DUF945-family-protein
MDIMHSHSTLFGFSLSCLTGKFYLNYMMIKMTLVTSLLLILISLIPYWTGIEAEKQLDHFNQVFYPAMNIQLIENDYQRGWFESQAQSTLEMPKTLVFSSPHHRLVVRHEIDHGFLPIQPTLIHTQLQTDTHETTLLQINTAIQGNGESISTFEMKPLTFQEEKIHLQLQELQGKVRIQFPSTLAQVELHNPQIQLTTEIYQLLMQNVSLNTELQATPSEFLQGVGYLTVEQSDFLPRKQQVTPLHFKKIQLVGHNDILSDYLTTAITLDLPYLGIGTDSYGPNRGKLELRHWHIPTLNALITNFMATRQQNLLPSSTYLTLFKLIPDGINLLQHHPQVAVTDLKINTVAGELQGTMQLQFESTQFNYFTLLNPIELFNRLQVQANIHLPRSLLATIINWAEMNFPLPQEQGIRWDKLITLEPNADYFSIQLQLEKGVFQVNGKPLSINYYRLRK
>NZ_AP014633.1|WP_052491980.1|2922235_2923684_-|peptidase-S8
MVNNKFNRLTLIRRYFRITTISCIISISILGGRVSINPASAEELPPETEKLSSAETLPGLVPIEPISLGESQSRNITLPNVPALTNRVIYRLKANATLLGTLSTAQMADFLNNSNNPVEKINPLLTQELLANSAEIKATSLARTFVVTLSSTTDIENIIKSLSQLPFVEYAEPDQIVQVSSTPNDTYFGEQWNLNNTNDADIDAPEAWDINTASKWIRIAILDTGAESQHTEFKGKLVKGVNFTSDDATQWEDGYGHGTHVAGIAAAKTNNGIGIAGICWGNCMIMPVKVLTDDGWGYYSWIANGIVYAAKNSAKVINLSLGSTTDSQTLHDAIQYAYKKGVTIVAATGNSGGAVLYPAAYPETIAVAATNENDGIPWWSNRGSEVDLAAPGVTILSTYLGNSLTWMSGTSMATPHVAGAAALLQSFYQQTYGKFLKPKQVRCYLQQSADDLGLSLDKQGAGRLNLEKLLLLVTDPNFVCDM
>NZ_AP014633.1|WP_045475828.1|2921198_2921597_-|DDE-type-integrase/transposase/recombinase
MCTFLKNKTHRQWIWRAIDLLNRMIMGFWISERDQDAAKALFRSLPPVYRQGAVGYTDGLASYVGSLPTTRHKIAKRKSGKTNHIERFNLTLRPRVAPLVRKPLSLAKKIQNLRDTVLNFIKDYNQPITLPV
>NZ_AP014633.1|WP_083942715.1|2921032_2921179_-|hypothetical-protein
MPLHIQHHPKDNLTTLYGKTAESRIFNPAQPNHIFTWLICESYTNYYL
>NZ_AP014633.1|WP_052491979.1|2920571_2920982_-|helix-turn-helix-domain-containing-protein
MARKLEIDIKETTQELKQLLHQQKSGRTKERVPVLYLLKTKQTETALTAAAVIGRTYSTVKRWLRIYRQSGIDEFLKLKHGGEELYPYHQRFWKHSINVSNNLKNSRVTKRFKFGFKKPMESNCTTQHFMVSFIPV
>NZ_AP014633.1|WP_052491978.1|2920223_2920478_-|hypothetical-protein
MADLYPGEHQRVRSWCTDESRFGLKTITRRRLTQRGVKPVGQVQWAFKSYYLYGLVEPLTGENFCLECSHLNTDHLLFQFNKLT
>NZ_AP014633.1|WP_045475838.1|2931722_2932040_+|hypothetical-protein
MFTNKQKKYTKVIDERFYVPEKLGGGLIKFEAWEYQNQIVKYNMAYINKKQYQGDNGRVIGYDNTHNYHHKHYLGDIYEVDDFVSYEELVERFQQDLKEFLYERD
>NZ_AP014633.1|WP_045475840.1|2932026_2932398_+|hypothetical-protein
MREIKNGTLNDFFASAKETAREIDQGKQVTPKYIIWMETEDFLYLLKPARRFLLKYIREHSKVYYSTLTQELNKSRRSLDRDLDILSKYQFINVYQEIDPRYGRRKVIESNFKNETMELRTVI
>NZ_AP014633.1|WP_045475841.1|2932462_2932906_+|DUF29-domain-containing-protein
MNKAIDYETDFYAWASYNAQLLREGKFSELDIEHIAEELESMGKNNKRELISRLKILIGHLLKWQYQPGGRSTSWRGSIVEQRLQLNDLIEYSPSLKPQLLEAITQAYPHAVELASDDTGFLESVFPEICPYSQEQILTKGFFPEPD
>NZ_AP014633.1|WP_045475843.1|2933024_2933720_+|electron-transport-complex-subunit-E
MNRYTTIIQAGLWKNNVGLVQLLGLCPLLAVTGTLINGLGLGIATILALIASNVTVSLTRHWIPTEVRLPIFVLLIASIVTIIELMIKAFYYDLYLALGIFIPLIVTNCAVIGRVEAFAFRQPVDRAFLDGLMMGLGFTLVLVMLGGLRELLGRGTLFDQAELLFGEFGYGLKITLFENYRGFLLAVLPPGAFFGLGLLIALKNLVDRQLALRTTSVFSWKSAQQQTSFPH
>NZ_AP014633.1|WP_045475845.1|2933784_2934561_+|class-I-SAM-dependent-methyltransferase
MRKWVTILKVFRCLFWRGYQFKCPLCGNTLRKFLPGGLLHPVLKEKKIIGGGYRLNFKCPCCGSLDRDRLIYLYLLYKTELFNKSVKLLHVAPEISLSKKFQACKNLDYLTADLYNPSVMVKMDIANIQYPDTLFDVIICNHVLEHVVDDRKAMSELYRILKWGGWAILQVPLSLQLHETYEDQNITTPRERERVFGQNDHVRIYAKDYRHRLEKVGFKVEEFNWNSDERFGRLKNQFGLNKEEYIYFVSKLPTTQSF
>NZ_AP014633.1|WP_045475847.1|2934614_2935271_+|endonuclease-III
MDIKQCHTLFTRLQAQNPHPTTELHYRTPFELLIAVILSAQATDKSVNKVTAVLFSLANTPSQVLALGEEQLREYIKTIGLSNTKARNIIKTCQLLIEQHDSEVPSERPALEALPGVGRKTANVILNTAFGKPTIAVDTHIFRVANRTGLATGKTVRIVENQLLATIPAEFCKNAHHWLILHGRYTCVARQPKCGQCIINDLCAYPHKTSITSNHFAD
>NZ_AP014633.1|WP_045475848.1|2935274_2935898_+|16S-rRNA-(guanine(527)-N(7))-methyltransferase-RsmG
MKLATELQQGLQALPLHLPPLTQTQLLNYLELLAQWNQVYNLTAIRDLAEMIPKHVLDSLAILPYVQGNTLVDVGTGAGLPGLLLAIACPQWQCLLLDSNAKKIRFVKQAILELQINNAQAICTRVEAFNPPIGFNTVITRAYANLHHFYSTTKHLGIPGGYLLAMKGVYPATEIAQLAQLPVQLKCLPIQVPQLPAQRHVVLMGPL
>NZ_AP014633.1|WP_045475849.1|2936002_2937142_+|hypothetical-protein
MPLLTPAQWAYLLFWFIVMIPAESSTTFVIGKYAQSQTGHYANNLKLNKILRIPDADELEVTIRGKIEKCCQFKTITKKCCDYLTIYDNNEQEIGKFSGLINEHLYVTGSAIRVTFRSDRRTTDEGVKVTIAARLPASIFNEIKGQLLAVIEQFLTFGTTEAYIKIRYNLQSIKTLHTTLIQREEIAGIVNDIAEELLAIARSYQEIAALAPAIMAKHQEQFKVINDLKSKTSYTIEKIEQQQKKYQTLLEKSQQEVSSNQLNKSLEEQKTQFSIDSYNNILQTLYAQQAIWNKFYEAQEILEQKLKKYSEKISILLYILNINAQVYEQAANVALLHNTTIVSLNNLSHLTELQKIMTEIEGSENEITQWLSKIEQTQL
>NZ_AP014633.1|WP_052491982.1|2937325_2937568_-|hypothetical-protein
MHIGSPIAPFVYASPLMGETQIICVNSGAGLHMLGRGSNGDYYDPATGTLNNNWGNPDAPGFGGATGGMYEFTGLWLVLN
>NZ_AP014633.1|WP_045475851.1|2937847_2938072_+|hypothetical-protein
MNFNTVQMISDENGQITGVIVPIELWRQMRSEVETTYLLKSEVMRQRLIEAKNRREGIDFEVACEKLRIRSDSV

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Crispr_ID: NZ_AP014633_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP014633_9

3502299-3502402

Orphan

Consensus_repeat	Method
CGTTCCCACGCTGGAGCGTGGGAA	CRISPRCasFinder

1 spacers

PD-DExK

The CRISPR arrays of NZ_AP014633_9

>merge|NZ_AP014633|9|3502299-3502402|CRISPRCasFinder
CGTTCCCACGCTGGAGCGTGGGAATGCGTATGGCACCGCTCCAGCGGTGCAGTTAGCAGACACTAGAGCGTCAAGAAAGACGTTCCCACGCTGGAGCATGGGAA

>NZ_AP014633|9|9|3502299-3502402|CRISPRCasFinder
CGTTCCCACGCTGGAGCGTGGGAA	TGCGTATGGCACCGCTCCAGCGGTGCAGTTAGCAGACACTAGAGCGTCAAGAAAGA
CGTTCCCACGCTGGAGCATGGGAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP014633.1\|WP_045476582.1\|3513372_3514815_-\|NADH-quinone-oxidoreductase-subunit-NuoN	unknown	unknown	gnl\|CDD\|235603
NZ_AP014633.1\|WP_052492052.1\|3496626_3496932_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014633.1\|WP_045476579.1\|3506437_3506842_-\|ATP-synthase-subunit-I	unknown	unknown	gnl\|CDD\|377159
NZ_AP014633.1\|WP_052492055.1\|3512728_3513373_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379276
NZ_AP014633.1\|WP_045476573.1\|3504598_3505069_-\|F0F1-ATP-synthase-subunit-B	unknown	unknown	gnl\|CDD\|180240
NZ_AP014633.1\|WP_045476556.1\|3497995_3498418_-\|F0F1-ATP-synthase-subunit-epsilon	unknown	unknown	gnl\|CDD\|234796
NZ_AP014633.1\|WP_052492054.1\|3511810_3512527_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014633.1\|WP_045476558.1\|3498481_3499858_-\|F0F1-ATP-synthase-subunit-beta	unknown	unknown	gnl\|CDD\|236447
NZ_AP014633.1\|WP_052492053.1\|3507282_3511659_+\|PAS-domain-S-box-protein	unknown	unknown	gnl\|CDD\|369881
NZ_AP014633.1\|WP_045476577.1\|3505584_3506400_-\|F0F1-ATP-synthase-subunit-A	unknown	unknown	gnl\|CDD\|235617
NZ_AP014633.1\|WP_045476566.1\|3501589_3502222_-\|riboflavin-synthase	unknown	unknown	gnl\|CDD\|183846
NZ_AP014633.1\|WP_045476552.1\|3495506_3496322_+\|DUF1003-domain-containing-protein	unknown	unknown	gnl\|CDD\|377629
NZ_AP014633.1\|WP_045476554.1\|3497115_3497718_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014633.1\|WP_045476568.1\|3502490_3504032_-\|F0F1-ATP-synthase-subunit-alpha	unknown	unknown	gnl\|CDD\|236448
NZ_AP014633.1\|WP_045476575.1\|3505090_3505384_-\|F0F1-ATP-synthase-subunit-C	unknown	unknown	gnl\|CDD\|180739
NZ_AP014633.1\|WP_045476571.1\|3504051_3504588_-\|F0F1-ATP-synthase-subunit-delta	unknown	unknown	gnl\|CDD\|365949
NZ_AP014633.1\|WP_045476561.1\|3499915_3500779_-\|F0F1-ATP-synthase-subunit-gamma	unknown	unknown	gnl\|CDD\|235535
NZ_AP014633.1\|WP_045476550.1\|3492130_3492370_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014633.1\|WP_052492232.1\|3492473_3494213_-\|cytochrome-c	unknown	unknown	unknown
NZ_AP014633.1\|WP_045476563.1\|3500876_3501554_-\|hypothetical-protein	PD-DExK	mkCas0061_PD-DExK_CAS-I:CAS-III	unknown

Protein	Function_ID	Function_description	E-value
NZ_AP014633.1\|WP_045476582.1\|3513372_3514815_-\|NADH-quinone-oxidoreductase-subunit-NuoN	gnl\|CDD\|235603	PRK05777, PRK05777, NADH-quinone oxidoreductase subunit NuoN.	0
NZ_AP014633.1\|WP_052492055.1\|3512728_3513373_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379276	pfam13578, Methyltransf_24, Methyltransferase domain. This family appears to be a methyltransferase domain.	3.19641e-20
NZ_AP014633.1\|WP_045476573.1\|3504598_3505069_-\|F0F1-ATP-synthase-subunit-B	gnl\|CDD\|180240	PRK05759, PRK05759, F0F1 ATP synthase subunit B; Validated.	1.52018e-51
NZ_AP014633.1\|WP_045476579.1\|3506437_3506842_-\|ATP-synthase-subunit-I	gnl\|CDD\|377159	pfam03899, ATP-synt_I, ATP synthase I chain. The atp operon of alkaliphilic Bacillus pseudofirmus OF4, as in most prokaryotes, contains the eight structural genes for the F-ATPase (ATP synthase), which are preceded by an atpI gene that encodes a membrane protein with 2 TMSs. A tenth gene, atpZ, has been found in this operon, which is upstream of and overlapping with atpI. AtpI is a Ca2+/Mg2+ transporter.	2.18373e-07
NZ_AP014633.1\|WP_045476558.1\|3498481_3499858_-\|F0F1-ATP-synthase-subunit-beta	gnl\|CDD\|236447	PRK09280, PRK09280, F0F1 ATP synthase subunit beta; Validated.	0
NZ_AP014633.1\|WP_045476556.1\|3497995_3498418_-\|F0F1-ATP-synthase-subunit-epsilon	gnl\|CDD\|234796	PRK00571, atpC, F0F1 ATP synthase subunit epsilon; Validated.	1.28362e-57
NZ_AP014633.1\|WP_045476577.1\|3505584_3506400_-\|F0F1-ATP-synthase-subunit-A	gnl\|CDD\|235617	PRK05815, PRK05815, F0F1 ATP synthase subunit A; Validated.	4.74847e-65
NZ_AP014633.1\|WP_045476566.1\|3501589_3502222_-\|riboflavin-synthase	gnl\|CDD\|183846	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional.	5.015e-95
NZ_AP014633.1\|WP_045476552.1\|3495506_3496322_+\|DUF1003-domain-containing-protein	gnl\|CDD\|377629	pfam06210, DUF1003, Protein of unknown function (DUF1003). This family consists of several hypothetical bacterial proteins of unknown function.	3.72703e-44
NZ_AP014633.1\|WP_045476575.1\|3505090_3505384_-\|F0F1-ATP-synthase-subunit-C	gnl\|CDD\|180739	PRK06876, PRK06876, F0F1 ATP synthase subunit C; Validated.	2.11715e-16
NZ_AP014633.1\|WP_045476568.1\|3502490_3504032_-\|F0F1-ATP-synthase-subunit-alpha	gnl\|CDD\|236448	PRK09281, PRK09281, F0F1 ATP synthase subunit alpha; Validated.	0
NZ_AP014633.1\|WP_045476571.1\|3504051_3504588_-\|F0F1-ATP-synthase-subunit-delta	gnl\|CDD\|365949	pfam00213, OSCP, ATP synthase delta (OSCP) subunit. The ATP D subunit from E. coli is the same as the OSCP subunit which is this family. The ATP D subunit from metazoa are found in family pfam00401.	9.94935e-53
NZ_AP014633.1\|WP_045476561.1\|3499915_3500779_-\|F0F1-ATP-synthase-subunit-gamma	gnl\|CDD\|235535	PRK05621, PRK05621, F0F1 ATP synthase subunit gamma; Validated.	9.6492e-164
NZ_AP014633.1\|WP_052492053.1\|3507282_3511659_+\|PAS-domain-S-box-protein	gnl\|CDD\|369881	pfam08447, PAS_3, PAS fold. The PAS fold corresponds to the structural domain that has previously been defined as PAS and PAC motifs. The PAS fold appears in archaea, eubacteria and eukarya.	3.01755e-21

>NZ_AP014633.1|WP_045476566.1|3501589_3502222_-|riboflavin-synthase
MFTGIVQAYVSVAAIIEKPGLITFSLIFPDELRVGLQTGASVAVDGVCFTTLKVEHNQVSFDAMQETLQRTTIGLLKTGQFVNVERSFKIGDEVGGHLLSGHVHGMAEITSIDTSIPNNQVVTFKIPHPLTKYIFTKGFVALNGVSLTLVEVDKQNATFRVYFIPETLKRTTFGYKQVGDWVNIEIDSQTQAIVETVERILAEKDLNSTA
>NZ_AP014633.1|WP_045476563.1|3500876_3501554_-|hypothetical-protein
MDEIAPKFIFSTLSADNLNSVVKIDDQGIVLPRWQSRRLECTVQEKQRLQLIQSYLNDRRITLMNEATIWARAIYPLLLLAERDNIQVWSQVSLKAQYPHFNLEGIIDGVLGDCTSGTITAPYLVVVEAKRGLESINPQYQLYGEMLAAAWLNWRQEPKAQPQTIFGCYTISDTWTFVFGIVSGFEADYPLMTIESSPEYLQRFEAETIFQIVKFIVNDYCEKKS
>NZ_AP014633.1|WP_045476561.1|3499915_3500779_-|F0F1-ATP-synthase-subunit-gamma
MATGKEIRTKIASIKSTQKITRAMEMVAASKMRKAQDRMSRSRPYAEKIRAVIGHLAHAHPEYKHPYMIAREVKKVGMIIISSDRGLCGSLNTNLFKTTLVTMRKWRDSNIEIDMCTVGNKSSMFFKRFGGHIVAQSAHLGDSPTLEDLIGTVRVMLDAYDNKMIDQLFIIYNHFVNTMTQKPTVRQLLPIAADEEDERLIHHWDYLYEPNAQEVLDGLLMRYIESLVYQSVVENLACEQAARMVAMKSASDNAGSLIQELQLAYNKARQAAITQELSEIVAGAAAV
>NZ_AP014633.1|WP_045476558.1|3498481_3499858_-|F0F1-ATP-synthase-subunit-beta
MSSGKIVQIIGAVVDVEFQRGSMPKVYDALLVDDSGLILEVQQQLGDGIVRTIAMGTTDGMRRELSVTNTGAPISVPVGQKTLGRIMDVLGKPVDEAGPVNEEVRWPIHRKAPAFDELSTSNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKESKVLDKVALVYGQMNEPPGNRLRVGLSGLTMAEYFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKVGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRQVAELGIYPAVDPLDSTSRQLDPLVVGQEHYDVARKVQGTLQRYKELKDIIAILGMDELSEEDKLTVSRARKIQRFLSQPFFVAEVFTGSSGKYVPLKETIKGFKAIVEGEYDHLLEQAFYMVGPIEEAVEKAKRI
>NZ_AP014633.1|WP_045476556.1|3497995_3498418_-|F0F1-ATP-synthase-subunit-epsilon
MAMTIHVDIVSAEAAIFSGLAELVIAPAIQGEVGILPRHAPFLTQLREGEVRLKISSTREESFYISGGMLEVQPYKVTVLSDTALRAHDIDEAAALEAKQRAEKMLSDKKTDFEYAKAQAELTEAMLQLRAIEKLRKLKK
>NZ_AP014633.1|WP_045476554.1|3497115_3497718_+|hypothetical-protein
MNPIFEYNRYLLKRQGFSLLGNFRIYDPMGNPVMFGEQKRFSWGKDIRVYSDENETQEVLMIRQRQIKLHQMFSLFLFDCIIFDVVDSVTDQKIGALRKSSEFGWLDQWHILDTNDNLIGILFKNSKEIIFWSQNYDITMGSKHVANLKWRFNLFTYQVNIGFSGDKNSIRKLDHRVGIAAGIVLRTLKGGVELEIDSNC
>NZ_AP014633.1|WP_052492052.1|3496626_3496932_+|hypothetical-protein
MVHDAIAYAPYTCLYKLQDTGYLESIERWLPKVKLGLCLWEGAYENQTTTWLRWCDQDKQLLLTGAERTAQAKQRAVQAEQRAERLAAYLRSQGIDPENIL
>NZ_AP014633.1|WP_045476552.1|3495506_3496322_+|DUF1003-domain-containing-protein
MLSHEIFNEVPLFELLDDDERKVLAQQVSIRKFKKGQVIFKAGDTGGLAYVIQKGTVYVTIKDAGHATVVVDIADEGGLIGMSSLLAEENHQTTAIAMEDTTAIEIDRHDIIALISAKPMAGLDMMTIVEKHLRSAHELMRTRVSRNPNEEIEEQETFGEKMADGVAKFGGSWTFVIIFGLILAAYTLTNSELVHPWDPYPFILLNLFLSMLAAIQAPILMMSQNRQDARDRLRSELDYRVNLKAELEIEEVLQRIGKLEEILMEQRKDEE
>NZ_AP014633.1|WP_052492232.1|3492473_3494213_-|cytochrome-c
MYPGQDKLGLCDPLKEICLSSLDLFEPLVLDTGLPVPDPVQLPKLVPVQQAMPGTSNSPQYFKRFDIDLPFFKNFPFGGIIQQVHWFAADGIPILPKDDNGNLNAYPLMRIQAVAKNADPTQTSLGFVDIVLPVASEADCQTCHADPDDFGNGAATRLASVKTYADGTPWEIMRQASAPGPEKLLNASKINILRLHDAKQGSRYTSSADGRSTPCNSGTEPACLANRTPVQCSQCHYSPALDLAQTGPVDEPEQGEVGRQQTRHISMSRAMHDYHGQFTELFSPMLSPDDPQRTPEVAQQLLETSCYQCHPGKKTHCLRGAMAQAGIVCQDCHGNMNQVGNDFSDGLPTGDGLDLTKRVPWANEPKCQSCHIGDAVTIAKLNTSDFILSKAGIRLLQTYQKSVAKQADLPFIAMPQSRFAENENLYRLSKGHGGVMCEGCHGSTHAIWPVPPSDNAPNSVTLANDNLAALDLQGHAGTLIECTTCHEAGSLKLTLKGPHGLHPVNDPTWNKRHEDVVEKDRNACRACHGLKGEGTVLARVAADRTLQAKEEQPNGSKTITLKKGTVVSCSLCHKNELAR
>NZ_AP014633.1|WP_045476550.1|3492130_3492370_-|hypothetical-protein
MTKLLETAFQKLSTELNESEQDLLAKVLLEQDVHIFLATAVGFLNDYNPETQQAIKAAAERTQVNHYQSVDDLFAKLGL
>NZ_AP014633.1|WP_045476568.1|3502490_3504032_-|F0F1-ATP-synthase-subunit-alpha
MQLNPSEISELIKQKIKNYDLTTESRSEGSVVSITDGIVRIHGLAEVMQGEMLEFPGDSFGMALNLERDSVGGVVLGPYKHITEGDKVKCTGRILEVPVGTELLGRVVNPLGQPIDGKGPLNTQLTLPLERIAPGVITRQSVGQPVQTGLKAIDAMVPIGRGQRELIIGDRQTGKTAVAIDAIINQKGTGIKCIYVAIGQKASSVANVVRKLEEHGAMEHTIIVAANASDAATLQFIAPYAGCAMGEYFRDRGEDALIVYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHSRLLERASRLNANYVEKLTNGEVKGKTGSLTALPIIETQAGDVSAFIPTNVISITDGQIFLETDLFNAGIRPAINPGISVSRVGGAAQTKIIKKLGGGIRLDLAQYRELAAFAQFASDLDEKTRKQIERGQRVTELMKQKQYSPLTVAEMAVSLYAANEGYLDNVNVKKVVDFEQALHSYMRANYADLLNKINEKGDYTEEVSKGFKAALEDFKANHTW
>NZ_AP014633.1|WP_045476571.1|3504051_3504588_-|F0F1-ATP-synthase-subunit-delta
MAELATIARPYAEAIFKLAKEKNHLDDWSVVLNFLKIIVEDPLMASVIANPQVDKNTLTQIWLAIGEGQLSETGKNLVKILVDNHRLLAIPQIAIQYETLKAQYQNYLEVEIMTPYPVTMPQQQAIETVLQQRLGKAAHIHITTDESLLGGWLVRAGDQVMDVSIKGRLQKLAAELRH
>NZ_AP014633.1|WP_045476573.1|3504598_3505069_-|F0F1-ATP-synthase-subunit-B
MSITVTLFGQILTFMVLVGFVWKFLWGPVTQMMATRSTRIAQGLAAAERGKHELELSEQRAAERLREAKQDAAEIITAANKRANEIIEESKEQARLEGQRQLELAQAEIEQETNRAKEHLREQVVSLSLLMSEKILGREIDASAHHNFLDQMIKEL
>NZ_AP014633.1|WP_045476575.1|3505090_3505384_-|F0F1-ATP-synthase-subunit-C
MTPEMITQLYASTALIVGIILAAAAFASALGWALICSKYLEGIARQPEMRPQLMTQMLFTGGLMEAFPMIVLGISMWFIFANPFIGAAQAAVKALGG
>NZ_AP014633.1|WP_045476577.1|3505584_3506400_-|F0F1-ATP-synthase-subunit-A
MTESHHSAANGTGAVEYIQHHLTNLSIGEGFWTIHLDVLFFSILLAAIIIGMAKKVGSNLDPDNPKGLQNFLEIILEFVERQVKEAFAGYNPLIGPLALTLFMWIFLMNALDLLPVDLLPLIAKWLGIPYLKVVPTTNLDTTLGFAGSVFALIIFYNIKIKGPVGFIKMYLFHPFPAHNLFVKILLMPINFLMTLIEEVAKPVSMGLRLFGNMFAGELIFILIALLPWWIQWLPGGAWAIFHILIITLQAFIFMLLTIVYLSIAHQVDEEH
>NZ_AP014633.1|WP_045476579.1|3506437_3506842_-|ATP-synthase-subunit-I
MKDEPHLESITVHTGATQMLIIQSLLVAGMAVLFYVHQGALAAQAALYGGGIVMFNVWMMNRRIQSAIKLAKVAPGQEVRVLYLTAVQRFIFTFVCLVLGMGGLQLPPIPIVVALAVAQLGYLFNGRFNLPTHC
>NZ_AP014633.1|WP_052492053.1|3507282_3511659_+|PAS-domain-S-box-protein
MSPTTTRYDHFFTHCHTLFGVIDAKGYFCQVNYAWQSLLGYDLDALSAHLYLDLVHPDDQAQTTAVLQQLTNISESITVVNRFQHRDGNYQEMVWQITPINQQTEFCMVAIPTAIFKTHLLPSPPDWSTIENTSLPGLLGKKQQELTLLQTELQDRQVALTIAQEDHVELSAQLETAQQNLVLLQAQLQGKQTALLSLQQDNVALNTHLEEAQQHLATLQIELEEKQADLNWLEEENNVLRSVLINIREGVVVQYADKHLQTLNAQVEQILTHPLTPTDFEQLWYINNIDPNTTRQNKPDQLVQLKKPQGGLLELSVCNQALYHPNDVQPYAKIVMFYDPSSQYSAELTLRHLKDDFDIIMQSKREGVLDWDLQNNQVTYSTRWKTIFGYTHEDVCTHIDAWYSRIHPSDHSQVMREVKNCLESVKTVYEKVHRVQHKDGSYRWVTSQGTALRDSSGRPYRFMATFIDITERKRAEETLEVTEKYERLFTTHPDAILLIENNGTVAEMNPAALNLYGYNRKEVTRLTQADLFASEINLAHLTAHTTYPGYHRKRDGSLFSAEIMVNELRWQTKRLFIVTVRDVTTAQQQTAQLIDNERKYHQLFEAESEAVIVFNAQTQQIFEVNQAAIQLYGYTYPEWLELNISTLFDKADSTAIGTTHQELPQKFSAWHRKKDNTRFPVTIAISQYTFKNQILVCAMVHDMTLYQPAQEFANTLLQTSPVFFIVLSPAGKIIFVNETLLKALSYTLEELQNKPYQTTLVLPTDRHRFEENLATLLSHPETRLLMEITVLAKNQYSLLLECHCQAVLDTQQQVTYILNIGIDIRERKEAQQQLHLYKSIVETSQEAIFVSTPNAQLVYINPAHEKLFKFHDFVPNKYNYRDYCTPATLRTIEHEIVPKIAQGQTWEGILPVFDFKGCHFPIWGRFDAIRDNQGRFLFAFGLMHDVTKQQEMEASLRYEREQYETIFHAAPLSIIYKDKENRVIKANRYVAQIAKFMKPSEMEGKSVYELFPQYAEEYYLNDLEVIKTGKPKLGLREKHSGGYSQVDKIPYRDANSNIVGVIVFSVDITRRLRTERAWRQKQQALQESEAQLRLTIEQLPMMIWAVDTQLNITLWNRHCERVTGYTADEIINNPQAWQLLYPDTPYREQIIGLCQQQLEHHGEFCQLESHLTCKNGKERTITWSIINMVRIEGSALWGVGQEISKREEQTVKLLRESEERLQSIIQNVPIMLNAYDESGAFLFWNQQCEKVTGYSAQEIVGNSNALKWLYPQTELYQQVQQFCLQPMSLWQYETEINCKDGNRKQIIWSNISKQYPLPGWFGWMIGEDISAFKQIQADFVEKDSLLSAILDSFPMSIGVTDRRGRFVYLNEAYCNLHGYSAKELLNSPLTVVIPPDNQNVVLRQYFSFLNQTGENTFTETYTALHKRGFLVEAHRVVERIEQENGQVYVIWLVNQVEE
>NZ_AP014633.1|WP_052492054.1|3511810_3512527_-|hypothetical-protein
MSSTTYFEHKLSQAFEPKQAKLLAETLVEAYDELVKSKDFNELKSIVREIAEAQKGLTIAQQHTEQRMEELTVAQQRTEQRMEELTVAQQRTEQSLIELIKEHKETRKQVGGLATTVGYSLENKAYKVLPQLLQRDFGLIVQGRLKRGYLKDNQGKELEVNIIGQALQEGKIVTIIGESKSQLSKPKIDEFIRKRLQRFEGVIPECFPILITHMISNSGVEEYAKNKGIAVYYSYDFE
>NZ_AP014633.1|WP_052492055.1|3512728_3513373_-|class-I-SAM-dependent-methyltransferase
MRKSMINQVKNWRVLWPLARLIPSSLLSLSKGRAFLLKEMPKNSICAEIGVWEGNFSKKILQMVNPTKLYLIDPWICEQKDIFDHSIYGKKTTQTNLDNIYQQVVNRFSQEINNGQVKICRGYSHELCNNFDDNYFDWIYIDGNHQYEFVKKDLELYYPKIKVGGFITGDDYYGKGNWWQDGVKRAVDEFIATNLVKVIKIKNGQFLLKKVGNP
>NZ_AP014633.1|WP_045476582.1|3513372_3514815_-|NADH-quinone-oxidoreductase-subunit-NuoN
MMVANLNTIWLLPEILLLTMACLILVIDAYLPEQLRNLTYQLTQGTLLGTGLLILANYPQQQILAMNNLFVSDPLSGLLKFLIVIVVFWVFIYSRRYLRDHNMFKGEYFVLGLLAVLGMMVIVSAHSLLTIYLGLELLSLSLYTMVAMHRDSPAATEAAMKYFVLGALASGLLLYGISILYGITGTLDLAKLAQLLTQESEQKTIMIFGLVFVVVGLAFKLGAVPFHMWVPDVYQGAPTAVTLFISTAPKLAAFAMLMRLLVDGMPQLHTNWQQILILLSILSMAIGNIVAISQTNIKRMLAYSTISHVGFLMLGVLTATPAGYAASLFYVVVYTLMSLGGFGVILLLSRGGFEAERLEDFKGLNERNSWYAFIMLILMLSMAGMPPLLGFWAKWSVLIQVVQAGLVWLAVAAVFFAIIGAFYYLRIVKLMYFDKSENLILIEAGMDMRVALSVNALVILFLGLMPHTLMTVCLSALGIT

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Crispr_ID: NZ_AP014633_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP014633_10

3648150-3648229

Orphan

Consensus_repeat	Method
AATGCTTGACTGGCTTCATCAAAGTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP014633_10

>merge|NZ_AP014633|10|3648150-3648229|CRISPRCasFinder
AATGCTTGACTGGCTTCATCAAAGTTTAGCATTCCACCATCAAAGTTTCTGTCTAATACTTGACTGGCTTCATCAAAGTT

>NZ_AP014633|10|10|3648150-3648229|CRISPRCasFinder
AATGCTTGACTGGCTTCATCAAAGTT	TAGCATTCCACCATCAAAGTTTCTGTCT
AATACTTGACTGGCTTCATCAAAGTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP014633.1\|WP_045476802.1\|3657990_3667365_+\|tandem-95-repeat-protein	unknown	unknown	gnl\|CDD\|380078
NZ_AP014633.1\|WP_045476765.1\|3633232_3633838_-\|outer-membrane-lipoprotein-chaperone-LolA	unknown	unknown	gnl\|CDD\|178807
NZ_AP014633.1\|WP_052492234.1\|3632415_3633210_+\|Stp1/IreP-family-PP2C-type-Ser/Thr-phosphatase	unknown	unknown	gnl\|CDD\|223704
NZ_AP014633.1\|WP_052492065.1\|3641493_3643239_+\|DUF3369-domain-containing-protein	unknown	unknown	gnl\|CDD\|274362
NZ_AP014633.1\|WP_045476768.1\|3633870_3635046_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|198057
NZ_AP014633.1\|WP_083942620.1\|3667603_3672628_+\|DUF11-domain-containing-protein	unknown	unknown	gnl\|CDD\|380078
NZ_AP014633.1\|WP_045476794.1\|3652631_3655643_-\|spermidine-synthase	unknown	unknown	gnl\|CDD\|223498
NZ_AP014633.1\|WP_045476758.1\|3628778_3631409_+\|CHASE2-domain-containing-protein	unknown	unknown	gnl\|CDD\|270916
NZ_AP014633.1\|WP_052492066.1\|3672760_3673090_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014633.1\|WP_045476791.1\|3652367_3652616_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014633.1\|WP_045476786.1\|3650590_3651301_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014633.1\|WP_045476757.1\|3627402_3628326_+\|carbohydrate-kinase	unknown	unknown	gnl\|CDD\|238572
NZ_AP014633.1\|WP_045476770.1\|3635053_3635365_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014633.1\|WP_052492064.1\|3631410_3632208_+\|Stp1/IreP-family-PP2C-type-Ser/Thr-phosphatase	unknown	unknown	gnl\|CDD\|223704
NZ_AP014633.1\|WP_045476774.1\|3635636_3641108_-\|diguanylate-cyclase	unknown	unknown	gnl\|CDD\|226415
NZ_AP014633.1\|WP_045476789.1\|3651332_3652367_-\|DNA-polymerase-III-subunit-delta	unknown	unknown	gnl\|CDD\|235511
NZ_AP014633.1\|WP_045476795.1\|3655655_3657083_-\|UbiA-family-prenyltransferase	unknown	unknown	gnl\|CDD\|236195
NZ_AP014633.1\|WP_045476784.1\|3650072_3650291_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014633.1\|WP_083942618.1\|3643245_3647433_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376772
NZ_AP014633.1\|WP_045476780.1\|3649160_3649721_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225297

Protein	Function_ID	Function_description	E-value
NZ_AP014633.1\|WP_045476802.1\|3657990_3667365_+\|tandem-95-repeat-protein	gnl\|CDD\|380078	pfam17963, Big_9, Bacterial Ig domain. This entry represents a wide variety of bacterial Ig domains.	8.4706e-20
NZ_AP014633.1\|WP_045476765.1\|3633232_3633838_-\|outer-membrane-lipoprotein-chaperone-LolA	gnl\|CDD\|178807	PRK00031, lolA, outer membrane lipoprotein chaperone LolA.	6.66564e-68
NZ_AP014633.1\|WP_052492234.1\|3632415_3633210_+\|Stp1/IreP-family-PP2C-type-Ser/Thr-phosphatase	gnl\|CDD\|223704	COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms].	2.03084e-78
NZ_AP014633.1\|WP_052492065.1\|3641493_3643239_+\|DUF3369-domain-containing-protein	gnl\|CDD\|274362	TIGR02956, sensor_protein_TorS, TMAO reductase sytem sensor TorS. This protein, TorS, is part of a regulatory system for the torCAD operon that encodes the pterin molybdenum cofactor-containing enzyme trimethylamine-N-oxide (TMAO) reductase (TorA), a cognate chaperone (TorD), and a penta-haem cytochrome (TorC). TorS works together with the inducer-binding protein TorT and the response regulator TorR. TorS contains histidine kinase ATPase (pfam02518), HAMP (pfam00672), phosphoacceptor (pfam00512), and phosphotransfer (pfam01627) domains and a response regulator receiver domain (pfam00072). [Signal transduction, Two-component systems].	1.86974e-50
NZ_AP014633.1\|WP_045476768.1\|3633870_3635046_-\|hypothetical-protein	gnl\|CDD\|198057	smart00989, V4R, The V4R (vinyl 4 reductase) domain is a predicted small molecular binding domain, that may bind to hydrocarbons.	0.00342938
NZ_AP014633.1\|WP_083942620.1\|3667603_3672628_+\|DUF11-domain-containing-protein	gnl\|CDD\|380078	pfam17963, Big_9, Bacterial Ig domain. This entry represents a wide variety of bacterial Ig domains.	7.92468e-17
NZ_AP014633.1\|WP_045476758.1\|3628778_3631409_+\|CHASE2-domain-containing-protein	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	1.16435e-102
NZ_AP014633.1\|WP_045476757.1\|3627402_3628326_+\|carbohydrate-kinase	gnl\|CDD\|238572	cd01167, bac_FRK, Fructokinases (FRKs) mainly from bacteria and plants are enzymes with high specificity for fructose, as are all FRKs, but they catalyzes the conversion of fructose to fructose-6-phosphate, which is an entry point into glycolysis via conversion into glucose-6-phosphate. This is in contrast to FRKs [or ketohexokinases (KHKs)] from mammalia and halophilic archaebacteria, which phosphorylate fructose to fructose-1-phosphate.	1.21015e-80
NZ_AP014633.1\|WP_052492064.1\|3631410_3632208_+\|Stp1/IreP-family-PP2C-type-Ser/Thr-phosphatase	gnl\|CDD\|223704	COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms].	9.37303e-73
NZ_AP014633.1\|WP_045476774.1\|3635636_3641108_-\|diguanylate-cyclase	gnl\|CDD\|226415	COG3899, COG3899, Predicted ATPase [General function prediction only].	0
NZ_AP014633.1\|WP_045476789.1\|3651332_3652367_-\|DNA-polymerase-III-subunit-delta	gnl\|CDD\|235511	PRK05574, holA, DNA polymerase III subunit delta; Reviewed.	1.67452e-100
NZ_AP014633.1\|WP_045476795.1\|3655655_3657083_-\|UbiA-family-prenyltransferase	gnl\|CDD\|236195	PRK08238, PRK08238, UbiA family prenyltransferase.	0
NZ_AP014633.1\|WP_045476794.1\|3652631_3655643_-\|spermidine-synthase	gnl\|CDD\|223498	COG0421, SpeE, Spermidine synthase [Amino acid transport and metabolism].	1.97149e-24
NZ_AP014633.1\|WP_083942618.1\|3643245_3647433_+\|hypothetical-protein	gnl\|CDD\|376772	pfam02369, Big_1, Bacterial Ig-like domain (group 1). This family consists of bacterial domains with an Ig-like fold. Members of this family are found in bacterial surface proteins such as intimins and invasins involved in pathogenicity.	3.48786e-08
NZ_AP014633.1\|WP_045476780.1\|3649160_3649721_-\|hypothetical-protein	gnl\|CDD\|225297	COG2453, CDC14, Predicted protein-tyrosine phosphatase [Signal transduction mechanisms].	1.87113e-12

>NZ_AP014633.1|WP_083942618.1|3643245_3647433_+|hypothetical-protein
MLQLNRSPLFQSPVFKVARRKMNMPYRLFSYFLIITGFIIELTGCLGGGGGSGDSQSVFNTTTEVTDERVATVTLLVTNDFQSANGQLPISLTVIARDRTNAPLVGVDVNLTSNSDFAVLVTPKGVTGENGRFTTGVVSSVAETFQVMAIAGGVQSQPVEVNFIAPVALIELVATTPVLAINETTTVTVTLHEKLTQDPLPNAPFNVSLSGSAQLGKLPQETDMKGQVSFTVTDSAAETVTVTVTSGSLSQSLPLYFGATLKLLPELSNAIDETTLTALLKDAADTPIVGQRVSFNFIGGNQATLTPTIAITGEDGTAAVKIIDLPKAGGIVVVNVNSGTLTAKATVRFGELLEDSRIATVKLVVIDDFQPANGKLVITLSVVARDADGIPLSGIPVSLLSDSDSAFFTTLNGLTGADGYFTTTVSSLTAQTFTVTPTAGGIKGEPVKVTFIAPTESIELTAAEIVLPVGKTTTVTVTLYHSKYDVIRDIWEVKPLPNATFKVNASGNAVLGAVPAVTNDDGQASFTVTDDTSENIIITVISGLETQTLSLYFGASLELLPQELNTIDEAKLKAILKDGKNTPLEGQLITFSFVNSNNETLSPPTVVTQEDGTAEVTVTDLAQNGGLAVIKATSGLLNAEATVQFKSNFGGNRRLVATTSATVLNVGQSATITAYITDDKNIPIIGQTVNFSVTTANGIATDAKLSTSTGISDENGEVKTTISSTSGENVIVTVQADTTKQEIPLYFGANLTLLPTQAEGMADGKTPVTLTLILKDAMGVGIQDIPITLRMPTGQASLTNFHPRTDELGRAQIEVSSIVLEEVTIEAQVDTLIPIATTHLTFKPSEPSQIVLSSSTGMSPLSLNGKATITADVKDSQGNPVKDGTQVSFSTTGSGVVTELALTQNGKAQANFSATNQAGLVTITATIGTVKESITLTIAAGSAGVIEISKIEPKVIGIIGSGAVQIATIEFLVKDNLGNPVVDGTEVNFTLGNTTLGGGETITTQDKTGETAIGTTNNGLVKVVLKSGRVAGNIDVIATVNKTISTAAKVTIVGGDPEAKHLSLAAEFFNVAGGVTFGLLDQITAYVGDRFGNIVPDGTAVTFMSEGGTIGSSIGGGAFTTTTQLGQATAQLQTAGPTVPLLGGVPTSRHDGYQCSGDYSQTSSSPDVPLCGNPGLVTIVAFTTGTESFTDVNGNGQYDVSEPYEDLSEPYIDGNDNNQFDVGELYIDVNGDHQFNEGNNQFDGPGGQSPNTTIWQSIKILFSANTAPFQVKPTDFHIPNGSSQSFSIKNIGDIYGNPLVAGTRLKVTTNNGILGGETDFVFEDKTERKIESIQFTLASQPAQQTTSADGKTILTYPPTSSATITINIESPFTDKAPGGNGSKSLIIEGKINVKE
>NZ_AP014633.1|WP_052492065.1|3641493_3643239_+|DUF3369-domain-containing-protein
MDEKLEEQRLPWKILIVDDEPDIHTLTRLSLNNFEFATRPLQLFEALSAQAAKEILVTEADIAVAIIDIVMETDDAGLKLIDFIRKELNNRLTRLIIRTGQQEVAPAKEIIEHYDIDDYKDKTELTIHKLYTTIRSALKSYHDLSTLDANRKALKKILDVAPELYHPQSIHQFFSGVLGQIIGLCNLGEHSLISTISHGLLITTSDTQQFTIQSRAGRFAQPADSEAQMISNICLDYLQGNYTESSLPANAIVIPLEGHDQLIGLVYLENARHLSQEDYDLIHIMTNQCAAALKNLKLYFELKEANQQTSYMLTIAEQARKMAEAANHAKSTFLAKMSHELRTPLNAIIGYSDMIQEEAIDSGCEELLPDLDKVHLAGQQLLDVISNILDISKIEAGKLELNLTEFSVATLISEVVTTIHPIMKMEGNVLQVESSQELGMLYADYHKLRQILLNILNNAAKFTKQGQIDLTVIRKILPLAVAGDNASAYPQSGQSEWFFFQITDTGIGIEPNKLNMIFEAFTQADNSFTREYDGTGLGLTISEYFCRAMGGQIFVSSTLGKGSTFTVQLPSRVVPTNPSTH
>NZ_AP014633.1|WP_045476774.1|3635636_3641108_-|diguanylate-cyclase
MITLSHYQNLSKIYESSKSLIFRGMDSKNNQSVILKVLKENYPSPVELSRYQQEYEMIYRLNLPGIIKTYGLESYQNTLLIVLEDFGGESLKQWLSNRVLKLKEFLPIAIAIAENLADLQAVQVIHKDINPNNIVFNPTTHQLKLIDFGISTRLPHENPLLINPNQLEGTLPYISPEQTGRMNRVLDYRTDLYSLGVTYYEMLTGQLPFNAVTPVEWVHCHIAKTPVAVNQVNPKIPRLIADIVMKLMAKNAEDRYQSALGLKQDLQACLKQIQRLKPNQDFYFKLGAQDFSNQFQIPQKLYGREAEIKTLLQAFEQVTQPINNQGGEMILITGYSGVGKSALVNEIYKPITEKQGYFAAGKFDQYQRSIPYFAFTQAFNHFCHYLLTESSEILQQWRKKIAAAVGANGQVLVEVIPHLEFIIGRQPSVAPVSFQEAQNRFNLVLQRFFQVLCQPQHPFVLFIDDLQWADSASLHLLKCLMMDPDNRSFLIIGAYRDNEVDLTHPLQATIRELQQSQVIIQTIVLANLAFNDVNQLIADTLHYPPHQVQLLAKLVYEKTQGNAFFTREFFKSLYEQALLTFEVENQQWHWRLNEIAATAMTDNVVELMAQKIERLSPASQEIMKLAACIGNQFDLKTLSTLCPHPQLMLKHLWQAIVEGLLIPLDENYKPTEKITPGILNSQVKFQHDRVHQAAYSLLAEPTKPIIHRRIGQLLLTDFSELEERLFEIVDHLNIGQPLITDDLEQIELVKLNLYAAQKAKAATAYVAAQDYLTIARQYLTNYSWNLYYYLTLAVYQESAEIAYLNGQFADSEAFIQLILEHARTSLDKAEIYKLLIVQYTLTAKYAQAIQIGREALHYLDMELPLPPHLKRTFIQEIKLAEQQLANRSVSSLLFQPPVVNYKIIMTIKLLRYIALPAYFSDQDLWTVIIMKNVNLCLQHGHVPESAPTFCAYGMILGALFQKYQLAYEFGLVATELSQKFNRNQCQAYTMMGIFLLPWVKHLPSTHAICHEAYQAGLESGDLQYVGYLLAWQLFHRFYQGTNLPQVLEEAEQGLVFTQKTNNQLATDIIFGIQRVVYQLQGLDIQPLLSESLYLDRCQQHQNLIGFYYILQTQLWYLHHQPVKALEYAQQAEEKLEFIRSFISRAEHNFYYSLTLIALYPQVNLPLQQRYWQQLEINQAQMQIWLTHCPANFQHQYELVAAEMARLAGQELQAIGRYQQAIQSAKQQGFIHNQALANELAAQFWLSKGFESYAQIHVIEAHYSYQIWGALQKISELEQAFPHWLSQKKIPNTTTSYLNTIMGTFVTQQPNDLLDLESIMKAAQSLSGEIILRQLLEKLMHIVIENAGAEKGLLILPQHGNWFIEAESHLNNPKVTVLQSITLETNQLCTAIVHYVTRIQQPVVLHDATQNDQFAHDPYIVMQRPRSILCLPLLNQGQLTGLLYLENNLIVGAFTPARLEVLKLLSAQMAISIENAKLYAELHESETRLAQFLEAIPVGLFVVEAHGQPCYVNQRAQQILGQGILATTTVEQLPSIYQIYLAGTEQLYPGNRQPLTQALYGKSTTVDDMEVHRGNQIIPIEVWGTPILGENSQVTYALAAFQDITERKQREIERMRFIQEREAKNVALQMNKQLQQEILDRQRVEVALAQANQQLTRLATLDELTQIANRRRLDEYLNLEWQRMMREQKPLAFILCDVDYFKRYNDTYGHQAGDECLQLVAMAMNCAVKRPGDLVARYGGEEFALILPNTNREGAVQVALLIQDHLNQLQIEHVHSEVSPHVTLSIGISTTIPMQNTSPNWLINMADKALYEAKRQGRNGIVLL
>NZ_AP014633.1|WP_045476770.1|3635053_3635365_-|hypothetical-protein
MNNIGIRTQDLFNLVNEQRKKNHQKVFENRAMAIIFSMAFTALTKEWIDFKKEFIGITDKQLNIIETICREKFNVELQGEIEPVALIAGHSPVYQTIKNTYQL
>NZ_AP014633.1|WP_045476768.1|3633870_3635046_-|hypothetical-protein
MSQMTMSGQNLIGGLNRVFHCNYYNAFLQMTVLLSDGMTECAPKQLLKTAATPLVKYLKQQGYSEQDLIKEFSTCGFGKLRQIDPITWETPNSHYSEASCFQEKPRHNCFFTAGYLQGITNRRVEEIACQLLGNPVDIFNVFEPQSSDNYLLYEPPITPVPGRFAFENAQNFATTVDEDKIIAAVKKLPFYGKADPNDNGLIDIFGVLLTQHFADYLNRISYETYFGMRRAGIPEMEAKALFIQAGIYCAFFTYGGIMKSEEWYNTVVPMCQTREDWIHAMVAIINTLGWGIWRIERLEPLKKLIIRVYNSYEGIGYRRMYPPTTDKNISFLAIGGCIGLARLLWKIDIREKPPLTWDFYLANFNNDDNDYQVTQTHAIAAGDEYDRFVVT
>NZ_AP014633.1|WP_045476765.1|3633232_3633838_-|outer-membrane-lipoprotein-chaperone-LolA
MKQVTVIFFLLFSSSGFAQPILDNFLKNLSSLHAQFEQQLFNETGKLIETSQGQMYIKRPNQFRWDYQKPYHQLIVADGENVWIYDPDLEQVTMKKLTKALGKTPALLLSSNRPIEEDFFVNPLPAKADITRLELLPKDAQAQFDSIRLNLRGETLLGFELVDNLGQTTLITFKQTERNQKLEESLFIFTPPAGVDVVTED
>NZ_AP014633.1|WP_052492234.1|3632415_3633210_+|Stp1/IreP-family-PP2C-type-Ser/Thr-phosphatase
MISRSDTGRIRDHNEDCIASDESLGLAIVADGMGGYQAGEVASQIAVNTIREQLDTPLKTLPRIKRHANHSLHSTTVLLEQAILKANQVIYETAERQIQYQGMGTTVVAAVFHRNFISVAHVGDSRLYRLRGRDFRQITKDHSVRQELIDCGYYTPEQARHSPNKNLVTRALGVGTKVNVEIQECNLLPKDIYLLCSDGLNDMLDDQEIYAILSNSEYSLEESAQLLIDTANDKGGEDNISLILVRPSLMVIKPKGWLQRLLSW
>NZ_AP014633.1|WP_052492064.1|3631410_3632208_+|Stp1/IreP-family-PP2C-type-Ser/Thr-phosphatase
MRIKIIGLSDTGQVREHNEDCIASDESLDLVILADGMGGCQAGEVASAMAVKTILQELRGLLKTLFRNQRHAQQRYHYATIQLEQAILKANQVIYEASAQQTRYQGMGTTIVAALFNKRFVSIAHVGDSRLYRLRGDEFRQLTKDHTVVQDLIDAGLLNSEQARYDARKHWVTRALGIDKQVKVDIQEQNTSAQDIYLLCSDGLSDMLDDTEIQVILKRTNRSLESSARLLIEMANKKGGDDNISLILVRPLPLQKSWLQRLFRG
>NZ_AP014633.1|WP_045476758.1|3628778_3631409_+|CHASE2-domain-containing-protein
MNNIQEKIWSHDWFISLIIGIILFIMAQLNLLQPIEQALYDAHIRWFNRAAGDKVAVIAIDERSLAQLGDWPWSRTTLAQLIDLLSPQAQVIGTTLPFNHFQTERGLVYFDELVKFYTHSKLLNPLPKQLEQLNTFFKKLSELRTRQSNKQFIKDIDEFYRNSLFPHELADTLTTFEDKLQAIRIDLESDQQLATSFKAAGQVVLGMPFTLAQTNYEEPGPDLPNYITQYRLKNIRDQFEQYNLTPQPPTAINASSPLAIFSENTTGIGYFNAEQLTNPRQIPLVIKYNQAYFPSLPLLLAAKSLHLDNNQIEISLGKGIRLEKLTVKTEPSLQIRPFFYRHTPPPDSFVDVLTGRVPIQKYQGKIVLLGITVRHYTPFHSTPIGEIPSILVLAHTLRSLLNQDFFTIPQWATGLQISLLLLVTANVGLLLPHLRRRQALIMGLGLMGVLYLLYFSLLNQGLLVQLMHGILLVPCGYLALQIKQGIIAYQDAFRSHPDAVESNRLLGLAFQGQGQLDMAFEKFRLCPPDNAIMGLLYNLALDYERKRQWRRASAVYRYMLNHIPHFRDIEQRLERLNRLRKPRLSRGAINDWLSPEDNNDKPILGRYQIEKLLGKGAMGTVYLGKDSKLNRLVAIKTLPLSQEFEAEGLQEATIRFFREAAAAGRLKHPNIVSIYDAGEEQDLAFISMEFFKGGNLVPYTQSDNLLAIPAVVKIGVYIAEALDYAHSQGVVHRDIKPANIMYNPATDQIKMTDFGIARITDSNKTKTGIILGTPSYMSPEQLAGKSLDGRTDLFSLGVMLYQLLTGILPFQADSMATLMFKIANEPHPDIISIRPDIPPCLKQVVDIALQKNAQDRYQNGAQLAQALRDCGNLNED
>NZ_AP014633.1|WP_045476757.1|3627402_3628326_+|carbohydrate-kinase
MILSCGEALIDWVPMGEGYRPCPGGSPYNIAIALGRLETAVGFLGKISTDFFGEMLVNNLINNQVDTRYIIRANGLTTLGIVSLPSQYQEPQFLFYANDSVDRNLTITELPAQFPPEVKVLHFGSISLVLEPGATALEQLMQRESGHRLISLDPNIRPNIITDKIAYSQRLENWLKSVDIIRVSVADLNWLYPKVNPETIIEQWLNLGPNLGILTLGSQGAKAYTRAGVTVWALAPAIQVVDTVGAGDSFLAAVLAYLDEQNILTTRTQLMNVSANQLTACLNYANHAAAINCLRVGTDPARKSELV
>NZ_AP014633.1|WP_045476780.1|3649160_3649721_-|hypothetical-protein
MDKNNLEPQPQTYYLSVYKVYHPHFKKLELYGGQYPGSLINSAAEHILKITELMNLGITTTICLIEESEQKCFYPYEEEVRKNQSTFKRWHYPIVDMSVPNKAFMQQILDTIDRLVIRHEKTYIHCWAGHGRTGTVIGCWLKRHGFDNKTVYQKLMQWRIQTLFGKISSPQVQEQFMMINHWKINE
>NZ_AP014633.1|WP_045476784.1|3650072_3650291_-|hypothetical-protein
MKFSDEDVELLAELFEEQQYQDELMLGLQTIDSHMLVPSNQDWHPDFAEIYNQLIELEDGLPYIPYISLVKH
>NZ_AP014633.1|WP_045476786.1|3650590_3651301_-|hypothetical-protein
MKYLNLDPSIVGAEDAEDKIIASELLERKLAEIDKQLEQLSANNTAPSKRAELLLDYADTCLELQKDFTAWQMAYQAFQLFIPLENWEGAVQACHILFKTEQPDSLAALGNGVWLAVTFPIDPELSVLMLESIVSETPDDSDGGAVAAATAHYIVDLRTEGQLRENLLFFTNQLLAKVARRHSQVNNQTDFESWFRRLELDSPPDFLGRLAQVLEVIVQDNWWIDREALRTKLPIH
>NZ_AP014633.1|WP_045476789.1|3651332_3652367_-|DNA-polymerase-III-subunit-delta
MKLKSAQLGQHLQRYGLAPIYLLTGDEPLQLNECADTLRTFARQQGFSERIVLTVEVGFDWNNLIQYANNLSLFASKRLLEVHLNNKLPGNEGSQVLITYVNHLSPQNLLLIIAQKLDTNQQKTKWFTTVDNQGIIIPITTLEGSLLATWITQRLSQSSLQATVEAINIIAERCQGHLLAAAQEIEKLSLLYGASTIDTAQVLEVVADSARFELFAWIDTVLKGEVQQSIRQLAGLRGEGVEPVLITWILNREIRQLCQITYALRQDHLPQQQVFKTYQVWQSRQETVLKAISRYPQSRIWQQFLTKIVKIEQIVKGSAVGNPWDELQRLSLQIAGKNLFNLSP
>NZ_AP014633.1|WP_045476791.1|3652367_3652616_-|hypothetical-protein
MKITFDIDATPQELRTFFGLPDIEPLQNEMLELIKKNMAMGTEGFDPATLMKPFLPETITAMQKTFWQAMLGQKPMDSDQAE
>NZ_AP014633.1|WP_045476794.1|3652631_3655643_-|spermidine-synthase
MQQLQISNQIIRRLYFIFFALSGFSGLIYESIWTHYLKLFLGHAAYAQTLVLIIFMGGMALGAWAASRYSLQLRNLLLAYAIVEGIIGLLALGFHPLFIRAIDFAYLTVIPQLTSTTSVNLFKWSLAALLILPQSVLLGTTFPLMSAGIIRRFPTTPGHSLAILYFTNSLGAAIGVLVSGFFLIEAVGLPGTMLTAGLINLLIALLVWLFCHTDNLENLPNRLTLSDSAQLLSQRVFIALLLCAALTGTASFLYEIGWIRMLSLVLSSSTHAFELMLSAFILGLAIGGYWIRRRIDNLFDLIKTLGWIQVIMGILALSTLVSYGQSFEWMSYTITALTKTAQGYTLFNVSSHGIALIIMLPATICAGMTLPLLTYYLISKGYGEKSIGSIYAANTLGAIIGVIAGVQFIMPNWGVKNLITIGGGIDILLGLILLWYAGTNFSKIRWIATAGVSGIVLLASVVWWQLDPIKMASGVYYHGNIPHGRTILFHKDGKTASVDLIRTSDESTLTISTNGKPDASMGKDKPTGDEPTMVLLGALPWSIHNQAKTAAVIGFGSGLTTHTLLSIPAIERVDTIEIEPAMVEGAKGFGERNINVFSDPRSHIHIEDAKAYFTNYKEKYDLIISEPSNPWVSGVAGLFSQEFYQLIRNQLSEKGLFVQWFHIYQLNMELVASVIKAISSQFADYAIYFSSRGDILVVSSKEDKISEPTQQIFKIPQIAKELAYIGIENQPDLLLRRLGSKAVLDSLFNSYPIAANSDYFPILDLGAVRTHYLNTIATELVDLHLVTVPLMAILENKPIRTEPLILGENFYIQAAAEAKQALAIYHYFQGIKTGQLPPPTTMAGETLAVIRNVRSLHQQQCPPTHPDWFKFEMEESWLFYLRTLADKTLPYLSPQEMDVIWNDIESAPCFAQLPQTIQQWTNLYKAIGQRNFQQILQFANELLPKAGSITDSKENDYLLMVAMLAHIALQDYNSALALFGRYTQGTTLPVELRLLAAIALQNR
>NZ_AP014633.1|WP_045476795.1|3655655_3657083_-|UbiA-family-prenyltransferase
MDPNPPDVPLCVDLDGTLVATDTLWESILLLLKQNILQLLLLPLWIIQGRAIFKHKIAQQVTLEVANLPYRENVLLFLQQEKKSGRSIILATAAHYSIAQAVFTHLKLFNEVIASDAHTNMKGITKRDALIQRFGNRGYDYMGDSTADLPIFQTARQPFLVAPTQQLLKQIQCPPQQILAVPTHHWQTLLKAIRPHQWVKNLLIFLPLLLAHQWFDVTKWINVFLAFITFSLAASSGYILNDLMDLAADRAHPTKKYRPFAAGLLSIPTGLILFVSLLGASLLMSLWWLSGYFTGLIGLYLILTISYSFYLKRKLIVDVLVLAGLYTHRILAGSVAVNALISSWFLAFAMFLFTSLAFLKRYVELLQLTDEKAIKHRGYEITDIEMVASMGPTSGYLAVLVFALYINSDKVSILYPSPFFLWLVCPLLLYWISRVWFLARRGKMLDDPVQYALTDITSWLIVVTIIILMLLAKFA
>NZ_AP014633.1|WP_045476802.1|3657990_3667365_+|tandem-95-repeat-protein
MLLFKLFRPIAYINKPNNPKDVISILTALFTLINLSGWVSIANAEGSRELVKFGGHRPYLEFIDQETTGIKRQPSIKVFVKAGEQVNVGSSVPNSANNNADIVYRWPPGNPPLLADGQVGNGSFDVGSTCGLIDTVTKESAGPLSNPGGYTPCTFIAQTTGIYEIEFHAPEFKGKTLYPVVKKVTEPFPTDKQQHQTVAAWDVTVFKTPNDPSTEQIGRAYATFLPMDMGANDLSLNSRIFLLNKTGYLYRANLNGIDPFLFIFFTNSKGFKNKADATGKSIYNSVEFGQLTNGKVFLHDPNDPDEQTDITHKIFFNPPATDLPLDIEVPLPSGNTTWLRSTLPALPKIKDFKFIGDEGSIGQTGTLPLKGSFSFSVDMNGDYMITIDANNNGVFGDGNDRVLMGDAKAGQDNIIPWDGLDGLGNPLPAQTLTYNSLLTLIVGAMHFPFLDPENNPAGLIVERINCNQLPCTVENSTVFYNNSRLGLKGKPATVIPPDPISATAGIDSSNGAQKFSGRFGDTRGIDTWTSLATDPVFLKGGLELKQADISVSKTHDTSVSLVSGGPITYIITVHNAGPSHITDIQVQDNLPATITEPFWTCQVTPNKAPPPAIQNRCAANNVDGPLNTTVDLQNGATATFLVEATISPTVSEGATIDNSVTITRPKDVTNPFGNQLDVKTETATHSVTIAPSTNKPPVAQDKNTATSNDTPVLIPALAAQDSDGSVVSYTVFQLPTLSQGLLYLGDPAAGGTLITEGQKLTPAQISNLYFKPDLGFGGEVIFNYQAVDDKGSASNTAKVTITVTVPPVNQPPVADDKIAPATPNDLTVRLPALSGHDDVEVVSYTITTIPPADQGILYLGDPQNGGQPIFPGIQLTPNEIASIFFKPGTTGQVTFNYLVTDNQGKASVPATVTIPVTGTNQPPVADDKTVAAIPNNITVALPALTATDKDGTIELYQITTIPSETQGLVYLDDPANGGKPIFAGQILTPAEVSILFFKPAHDFGGGEVKFTYTATDNYAAVSNIATVTIPVVVSPNQPPVANDETANTNPNTPVKISILDNDNDPDGDLDPKSLSITSQPKNGTVVVNPDGTITYTPNPGFTSGTDTFTYQICDTGKPPQCDTATITITVPAQLPPVAENKTAPTTLNNTVVQIPPLAATDSDGTVTTYTIETLPLVSQGILYLGNPAQGGKPVAVGEKLTPAQIEQLFFQPDGNFIGNASFTYSATDNLGAVSNPALVTIPVEAPVNSLPIASDDTASTNPNTPVTIPLLKNDTDPENQLDPSSIRIISPPPHGKVTVNPDGTVTYTPNSGFTTGIDVFVYEVCDTGTPPQCDTAEVKVSVPVPNNQPPLAENKITSPSPNNVTLPIPNLSATDSDGTIASYTVATLPPLNQGVIYLGKPDEGGIPLLPGQVLTPEQINRLYFRPNPEFTGNASFTYTATDNQGSISNQALVTMPIIPAAINNPPLANDDSATTNPDTPVIIPILKDDSDPEGNLDLGSITILTPPPNGTVVVNSDGTVTYTPNPGFTIGTDIFTYEVCDLGNPIQCDTASISVIVPIPVDPLPVAENKTAPSTTNDKPVQLPALSATDNGTIVFYTITTLPPANQGVLYLGDPATGGIPITPGQVLTPEQVKQLFFKPNPDFTGNASFTYTATDNAGGVSSPALVTIPVTLPPNSRPVANDDSATTEQNTPVTIPILSTDQDPEGNLDPSSITITKQPTQGTIKINPDGTITYTPNPGVANVIDTLIYQVCDKAKPPQCDTAKVTITIPGAANNPPIANDESTVTNPETLVKIDILNNDSDPEGQLDPRSVTINTQASHGKVVVNSDGSVSYTPNPGFTAGIDTFIYQVCDKGTPVQCDQAIVRVTVPIPVDLPPVADNKKALPTPNDKTVQLPPLSATDNGTVVSYTITTLPPQSQGILYLGDPKAGGIPVTAGQVLTPAQVSQLFFQPNPRFTGDASFTYAATDNLGAMSSPALVTIPVTSGTQPVDLNVTIRGNGAVNSQPTGINCNNNNQPCNHTYDYGTQVTLKPTADTGWEFEGWRGHCDNNNQVTMNGFKQCKAVFVDSSIPQFSLNIEKPAGGTIKTQPTGIDCGAKGDDCSEAYTSGSTIDLIAEPEPGYSFVEWSGDCHGTSPTITVMMGQELNCKAVFSRDGDDDGIASVIEDGAPNHGDGNNDGTPDSQQNNVVSLLTPEGKYITIEERNGCTINEIKLNQDSLPKDGAYYSPALIDYVLSACPEADIKVYYHDVSDLGDQPLRQYAATTPGDPNTMQWQDQADVTRGTVVINGKPVAFETFKLKDGKLGDNTGEDGQILHTSGRVIEPGKIQLSSTNYTVDEFGHAATVTVRRTGSCDGTVTVDYTTQTVTATTNTDYTPISGKITWADGDCSDKVISIPIIDDKNQESNETVAIKLLNATGGATIATPESTLTIIDDDLSSTTTPTSTCGTSSCTSCGTSTCTNGCSTCQGSCPCQSGCSTCQSTSSLQVKTLSTTIKVGETVTMTIGEGKGDLLIKEMPYKAFVSLESWKPLSTGVNELSLKGLSVGDTKMIISDSATPAQTTTLYITVVNGNLFDTGNTGTSNGFSIQNLQTTLEVGQNLDMTVAGGYGELSISEIPDPHLALLEAWTPLGNTGTATFNLIGVSPGRTKLVLSDHASPPQKITVYITVVKDRTQLTTTNDSCEPAIGMDSQGNPLNAQACFKSQIYLNEKLQSNHRRMSHQEAQRIKVSATVQVDPAHIGQAADILTVGIHNTILKETKYTRDDQTWQSWDGQISSLPVAQYYPQLPETIEVFLYEGDLSGMPGEYHGYIGYRLMDGTIIYNGIEPIHFFVGNSASIDMRGEPRKEPASTDAYTTSFFESLVHNGSGKVGDQLTFDNEDELIVSTFVQVEPQDVGRSADILMVAEHNTGLYQFEYTRTGPNWIGWDSQLESLSAAQYYHQLPALLEIPIYLGSLSHVPGEFTGYVGYRLPEDLIVFNGFMPVRVTIANGVGLAAQGDKFPTTSRFISWGYRDNRLGNPFDSAADQSLSLDTTIWVDPQHQGQVADIQMIGLCCQWTEQRQTWGQWSEQQIRFQTTIPKVTLQPRLEKIHLDEKQLPPGEYTVYISYHLNNGDIIYNGAEPLRLKIW
>NZ_AP014633.1|WP_083942620.1|3667603_3672628_+|DUF11-domain-containing-protein
MSYLGETNMLFSLKNTLKYYKVLLFIGLTLFIFTQTLTLIPLAKAEGSHELVKDGGFRPYLLFITDSSPSALISGIAPKATIKVFVKAGEQVNVGSSVPKSDSSFNKRDIAYFDPAGNEIGPPYCDVADDPTVVKPLGLIQTIADESYGPEDPNDLSSADPPGYTPCTFTALTTGVYKIEFHAPLKSNNSPSSATSATAQFPIDDKQQAGVAAWDVTVFKTPNDPTTKQIGRVYANYLPLYTKGTTDPINSQLFILSKVGHSYHIHLNGIQPLKFVFFANNKGFRDTSGNSLLKSVLQTDANIHNPGVADDTDNVTYKIFFNDPANSDLPLDADSKGDWNNSTTDKTWLLSTPPPLPIVDNFKFTGSDGTANQAGTTNPQGGQFSFNTNMAGNYILTIDADQNDIYGDNNDKIIMGTADIGNNTVDWDGRDGNNQSLGIGAYKAKLLLSDEVHFPFFDVEKNPNGLIIDRLTSCSGVCDVVYYDDSNFLADGGKKKLEGENSSNGAHKFTTPPTTGFGNDRGIDTWTSITAEPAAPLDINIKEVDLEVTKTHSPDNLSPGSTVTYTIKVESNDGSFSDVTGIKVEDTVPSNMSGVTWTCTVDHTEPGNRCAQASGTGNINTTVDLTPGTIATFTVQGTISNSLPVGQEIKNTVTITTPNDVTNNPGGKTENAEDTITLVAPNSQPPTANDDSASTQANTAVTIPVLTNDVPSTGSPLEVTSVVITIPFANNGTVQVLADGTVKYTPNTGFSGTDTFTYKVYDTDGLYDLATVTVTVTSPPPPPPPPPPSPPPPTPPPPTPPPPTPPPPTPTVNKLLSIKITGKGTVTSNPGSINCHNDMGVCTSNIEMNTQVTLSAKPDSGWKFKEWKQDCDKNGEVTLSSNKQCEAIFVQIQQLTLTVFITGQGSVTAISPPGGIDCGPDCANDYAEETPVILKATPAASWKLEGWRGHCDEQGKVTLLETDKQCRAIFTPITTPLEPFKVTVYKTGQGTVVSEPNGINCGGTCSAQYDGSHGVKLTATPDPGWKLEGWRGHCDENGQVVRSSTSYDHAQCRVIFLLDPSSVTPPPIVTPPPIVTPPSIVTPPPNDNPVNQDDDHDGVSTPTENAAPNSGDGNNDGIPDSQQNNVISSPSGGQGGQYVTVEETNGCPVQANQPAATAIDLNLSCSQANIKTYYHGISDYQNLPSFRSVSTGGNSNTTQTPPITYNTVMIQGQPVAVESIKLSDGGIGDSIAGDGKITYTNKQSSLPSNEPQPTPPIHPIPVSPFNSVSTIIGQEIGGFNPNNNTSQNTTTGVNNTDSPTISRCLLFSSTTTQSSSWSQILQVGDTTTITLNTGPGEFSIKEMPDPTLVSVEHWQSLNGNVELSLTGLSVGDTQMTLSDSAASQQATLHITVIAIAHSANSAPPLVEKEVKTLQTVMQVGQDINLVVTGGEGSLAITQLPNSSLVSLTHWQNQTNGTAYFTLTGLNIGNTNLVITDEATPPQKTNVNISILTNKSSDDDKPVIDSTIADNSVNSTTACQGDTLGIDLQDRPNQACFMGKVISLGDLRSSAHVFTPTEAQNARVTATVLISPADVGKAAKILLVGKHTNLNGETTLYIRDDSRDQHSWQKWNGQIEQIPPSQDYPQLPEIIDIFIYEGDLSAMPGEFTVFVGYQLSDSIIIYNGLKPIHFWIDSN
>NZ_AP014633.1|WP_052492066.1|3672760_3673090_+|hypothetical-protein
MISTLEKLKCLEAYLAANSSIVDSVLDKSITKLLAREQMRMQNLTQRLQQQISQFEKNYHLVSQEFYTRYNQGKMGDEMDFVEWASTIEMLANAKKRIALLDSVNESVD

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Crispr_ID: NZ_AP014633_11

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP014633_11

4257786-4257902

Orphan

Consensus_repeat	Method
CATTGGCCCATTGTGAACCTTGGCTAGGAGTGGTGGGAGTTGATT	CRISPRCasFinder

1 spacers

PD-DExK

The CRISPR arrays of NZ_AP014633_11

>merge|NZ_AP014633|11|4257786-4257902|CRISPRCasFinder
CATTGGCCCATTGTGAACCTTGGCTAGGAGTGGTGGGAGTTGATTGAGTGGTGCTGCTCTTCCCGTTATCACCATTGGCCCATTGTGAACCTTGGCTAGGAGTGGTAGGAGTTGATT

>NZ_AP014633|11|11|4257786-4257902|CRISPRCasFinder
CATTGGCCCATTGTGAACCTTGGCTAGGAGTGGTGGGAGTTGATT	GAGTGGTGCTGCTCTTCCCGTTATCAC
CATTGGCCCATTGTGAACCTTGGCTAGGAGTGGTAGGAGTTGATT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP014633.1\|WP_052492131.1\|4250535_4251138_-\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|99749
NZ_AP014633.1\|WP_045477551.1\|4274471_4274960_-\|rod-shape-determining-protein-MreD	unknown	unknown	gnl\|CDD\|182936
NZ_AP014633.1\|WP_045477542.1\|4255392_4255797_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|276809
NZ_AP014633.1\|WP_083942646.1\|4247736_4250430_+\|radical-SAM-protein	unknown	unknown	gnl\|CDD\|223609
NZ_AP014633.1\|WP_045477545.1\|4267386_4267686_-\|DUF493-domain-containing-protein	unknown	unknown	gnl\|CDD\|377327
NZ_AP014633.1\|WP_045477536.1\|4242733_4242943_-\|type-II-toxin-antitoxin-system-VapB-family-antitoxin	unknown	unknown	gnl\|CDD\|378324
NZ_AP014633.1\|WP_045477534.1\|4241558_4242038_+\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|99749
NZ_AP014633.1\|WP_083942647.1\|4267026_4267233_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014633.1\|WP_045477541.1\|4251166_4255315_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238121
NZ_AP014633.1\|WP_045477544.1\|4260612_4266564_-\|choice-of-anchor-D-domain-containing-protein	unknown	unknown	gnl\|CDD\|380152
NZ_AP014633.1\|WP_045477547.1\|4268533_4269682_-\|D-alanyl-D-alanine-carboxypeptidase	unknown	unknown	gnl\|CDD\|224600
NZ_AP014633.1\|WP_045477548.1\|4270266_4271304_-\|lytic-murein-transglycosylase-B	unknown	unknown	gnl\|CDD\|372592
NZ_AP014633.1\|WP_045477539.1\|4247131_4247392_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014633.1\|WP_045477538.1\|4244469_4247130_-\|pyruvate-dehydrogenase-(acetyl-transferring),-homodimeric-type	unknown	unknown	gnl\|CDD\|236500
NZ_AP014633.1\|WP_045477550.1\|4272513_4274400_-\|penicillin-binding-protein-2	unknown	unknown	gnl\|CDD\|274573
NZ_AP014633.1\|WP_045477535.1\|4242072_4242705_+\|hypothetical-protein	PD-DExK	mkCas0061_PD-DExK_CAS-I:CAS-III	unknown
NZ_AP014633.1\|WP_045477549.1\|4271340_4272435_-\|rod-shape-determining-protein-RodA	unknown	unknown	gnl\|CDD\|274033
NZ_AP014633.1\|WP_045477546.1\|4267678_4268521_-\|D-amino-acid-transaminase	unknown	unknown	gnl\|CDD\|238799
NZ_AP014633.1\|WP_045477537.1\|4243093_4244458_-\|dihydrolipoyllysine-residue-acetyltransferase	unknown	unknown	gnl\|CDD\|237000
NZ_AP014633.1\|WP_083942648.1\|4269803_4270346_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223868

Protein	Function_ID	Function_description	E-value
NZ_AP014633.1\|WP_052492131.1\|4250535_4251138_-\|Uma2-family-endonuclease	gnl\|CDD\|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	1.83756e-26
NZ_AP014633.1\|WP_045477551.1\|4274471_4274960_-\|rod-shape-determining-protein-MreD	gnl\|CDD\|182936	PRK11060, PRK11060, rod shape-determining protein MreD; Provisional.	3.33383e-29
NZ_AP014633.1\|WP_045477542.1\|4255392_4255797_-\|hypothetical-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	0.000771177
NZ_AP014633.1\|WP_083942646.1\|4247736_4250430_+\|radical-SAM-protein	gnl\|CDD\|223609	COG0535, COG0535, Predicted Fe-S oxidoreductases [General function prediction only].	1.02413e-20
NZ_AP014633.1\|WP_045477545.1\|4267386_4267686_-\|DUF493-domain-containing-protein	gnl\|CDD\|377327	pfam04359, DUF493, Protein of unknown function (DUF493). This domain is likely to act in a regulatory capacity like pfam01842 domains. This domain has a remarkable property in that the C-terminal residue of every protein in the family lies up in the alignment. This suggests that the C-terminal residue plays some important functional role (Bateman A pers obs).	1.04604e-33
NZ_AP014633.1\|WP_045477550.1\|4272513_4274400_-\|penicillin-binding-protein-2	gnl\|CDD\|274573	TIGR03423, pbp2_mrdA, penicillin-binding protein 2. Members of this protein family are penicillin-binding protein 2 (PBP-2), a protein whose gene (designated pbpA or mrdA) generally is found next to the gene for RodA, a protein required for rod (bacillus) shape in many bacteria. PBP-2 acts as a transpeptidase for cell elongation (hence, rod-shape). [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan].	0
NZ_AP014633.1\|WP_045477534.1\|4241558_4242038_+\|Uma2-family-endonuclease	gnl\|CDD\|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	3.23391e-12
NZ_AP014633.1\|WP_045477541.1\|4251166_4255315_-\|hypothetical-protein	gnl\|CDD\|238121	cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment.	3.57449e-89
NZ_AP014633.1\|WP_045477544.1\|4260612_4266564_-\|choice-of-anchor-D-domain-containing-protein	gnl\|CDD\|380152	NF012200, choice_anch_D, choice-of-anchor D domain-containing protein. This HMM describes a repeat domain just over 100 amino acids long and usually found in tandem copies. Members appear to be extracellular proteins that have some C-terminal anchoring domain, such as type IX secrection (T9SS) or PEP-CTERM.	2.21557e-07
NZ_AP014633.1\|WP_045477547.1\|4268533_4269682_-\|D-alanyl-D-alanine-carboxypeptidase	gnl\|CDD\|224600	COG1686, DacC, D-alanyl-D-alanine carboxypeptidase [Cell envelope biogenesis, outer membrane].	3.41865e-147
NZ_AP014633.1\|WP_045477548.1\|4270266_4271304_-\|lytic-murein-transglycosylase-B	gnl\|CDD\|372592	pfam13406, SLT_2, Transglycosylase SLT domain. This family is related to the SLT domain pfam01464.	2.67622e-132
NZ_AP014633.1\|WP_045477536.1\|4242733_4242943_-\|type-II-toxin-antitoxin-system-VapB-family-antitoxin	gnl\|CDD\|378324	pfam09957, VapB_antitoxin, Bacterial antitoxin of type II TA system, VapB. VapB is the antitoxin of a bacterial toxin-antitoxin gene pair. The cognate toxin is VapC, pfam05016. The family contains several related antitoxins from Cyanobacteria and Actinobacterial families. Antitoxins of this class carry an N-terminal ribbon-helix-helix domain, RHH, that is highly conserved across all type II bacterial antitoxins, which dimerizes with the RHH domain of a second VapB molecule. A hinge section follows the RHH, with an additional pair of flexible alpha helices at the C-terminus. This C-terminus is the Toxin-binding region of the dimer, and so is specific to the cognate toxin, whereas the RHH domain has the specific function of lying across the RNA-binding groove of the toxin dimer and inactivating the active-site - a more general function of all antitoxins.	9.70149e-10
NZ_AP014633.1\|WP_045477538.1\|4244469_4247130_-\|pyruvate-dehydrogenase-(acetyl-transferring),-homodimeric-type	gnl\|CDD\|236500	PRK09405, aceE, pyruvate dehydrogenase subunit E1; Reviewed.	0
NZ_AP014633.1\|WP_045477549.1\|4271340_4272435_-\|rod-shape-determining-protein-RodA	gnl\|CDD\|274033	TIGR02210, Rod_shape-determining_protein_RodA, rod shape-determining protein RodA. This protein is a member of the FtsW/RodA/SpoVE family (pfam01098). It is found only in species with rod (or spiral) shapes. In many species, mutation of rodA has been shown to correlate with loss of the normal rod shape. Note that RodA homologs are found, scoring below the cutoffs for this model, in a number of both rod-shaped and coccoid bacteria, including four proteins in Bacillus anthracis, for example. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan, Cellular processes, Cell division].	1.75735e-156
NZ_AP014633.1\|WP_045477546.1\|4267678_4268521_-\|D-amino-acid-transaminase	gnl\|CDD\|238799	cd01558, D-AAT_like, D-Alanine aminotransferase (D-AAT_like): D-amino acid aminotransferase catalyzes transamination between D-amino acids and their respective alpha-keto acids. It plays a major role in the synthesis of bacterial cell wall components like D-alanine and D-glutamate in addition to other D-amino acids. The enzyme like other members of this superfamily requires PLP as a cofactor. Members of this subgroup are found in all three forms of life.	1.25854e-119
NZ_AP014633.1\|WP_045477537.1\|4243093_4244458_-\|dihydrolipoyllysine-residue-acetyltransferase	gnl\|CDD\|237000	PRK11855, PRK11855, dihydrolipoamide acetyltransferase; Reviewed.	0
NZ_AP014633.1\|WP_083942648.1\|4269803_4270346_-\|hypothetical-protein	gnl\|CDD\|223868	COG0797, RlpA, Lipoproteins [Cell envelope biogenesis, outer membrane].	9.44837e-31

>NZ_AP014633.1|WP_045477542.1|4255392_4255797_-|hypothetical-protein
MVVKRSLVTSKPFGGQRFAFTHPTKSRALMLLYQSGVSSNTVLDRKRAELLEQIAIILDNKHQFSEALINYNRVLTLFNRPHLLKDRSLNHTKIRLLRRTAALLLHLGDHKRARQRYQFIYEQTGKWYNLPKLK
>NZ_AP014633.1|WP_045477541.1|4251166_4255315_-|hypothetical-protein
MSSISIPTVRILIASPNDVHDERQIATHFLSYLQEKLAAHLQLEISYDDPLPATDTSSSHLPYPPHFDLVMCIWWSQLGSPVLPHLTFAGGLPLRRPNGVVYESTAVATFEEALSAYESAAKPRLFTVFKTAPLNPDEQQFDIRLEQQQAVKTFRKKWFFNEQGESKRHYFQFQHIKEFERLLEQQLYPLLQQHFFPTQSPLRWTDSPFRGLQPFAPEHAPLLFGRDQAIADLFKRLQVWNFQANTPSFLLIMGPIGCGKSSLVGAGILPLLAKLNIPYQIFRPSVAITDMVAGLKAVIANLEPAATSASSSSPTPGKLAGILFIDQLEELFTLATLSNSVRHELIRLIDSLARRSLIGVMAALPSEFLPCLNEFPDMLELMAENRHYLLFPPTPVELQQIISAPAQLAGLQFENTENSALDKTLLQAVATVSNNLALLEFTLQALYEKRNENNCLTQAAYQQIGGLQGALAHYAEQFFSQLSEAEQQEWRELNRLLVTVEPTHFIAIASHPLAKEQLTTNEIRTELVNKLIAAQLLVVNEQAQPVVCYWPTALLLHWPRLQQWLTEERDLLRVRTRLATAATAWQSQERAPDLLLPDSLLLTEAEDLLWQWEDTLAEHEKAFLEASLVQRQQDLDTREEVSQRRERWQRRINIQLSLLLLVVLVVTIFISWRWWEIHQNIQINQQQKQSAFSRQISTQAVLTAYLPNPSNGYFNHALLLAAQAVQFQSTPETQANLLRVLQSNPQLEGYWYWPGETIHNLAFSPDGQRLAFANQDNSLILWDIGKKIPIGEPLLGHTDAITSLVFNPFSTQLMSASLDKTIRIWDLESPLPIGEPWQHKEIIRAMAISPDGTQLATGGDDKVIRLWQLPTRQPLGVPLQGHTDTINSIAFSPNGKRLASASADKTVRVWELPPATSAGLSLQGHTAAVQQVIFNPFGTRLASTSQDNTLIIWEIDQETPMGHRLPGPNTAIQQIAFSPDGKRLAGAGKDNTIRLWDVEKKQLLETPWQGHETAVRWLAFQPDNQHLISISEDNTLITWNLFPRQRLELALPRQFSGMNSVAFSQNGKWLAGASIDNTLVIWDIEQNQTIDSLPSGHTAEITSLAFSSNNRWLASASRDKTVRLWDMKQNLAVETPLQGHTDVINSIAFSPNGKWLASASDDKTIIIWDLATKAPLGQPLQGHTAAVQSVAFNPSSRWLASGGWDGNIILWQVKDQTQLGLPLQGHQDAVYSLAFSPNGKRLASASRDDTIRIWDIHKRTLIGQPLRGHSKDVTSIAFSPNGRWLASGSWDETIQLWDVDTQTKIGVLGGHSSFISKVTFNSNGQWLASVSLDKNVKLWEVNLSTWLNRACQIAGRSLTQTEWQRYFNNEPYQSTCAQYGYK
>NZ_AP014633.1|WP_052492131.1|4250535_4251138_-|Uma2-family-endonuclease
MSAIAEYLENISSTAATAEPHLYPINVATYHRMGEIGIWAKGERTELIDARIMTMAPIGSEHADWVDRLNQFFVKTVPEDITVRIQNPVHLDEYNEPQPDIALLRPREQPYREAHPHAEDVLLIIEVADTSLNYDRHVKVPLYARYGIVEVWLLDIRGNRLEIYQEPHEESYRIMLKPRRNERITPMKLATIGIDLSNFR
>NZ_AP014633.1|WP_083942646.1|4247736_4250430_+|radical-SAM-protein
MKEGNSLSGLLDTLRLVRPTKLQNYKTKSIWGTITKGIIFMLSFERYGAIQPEWEGTVGEIIKDKPLRQSFTCIHPTLVRLEVFLYTYHRINPCRLWLKLWEGNWHGNDKKIINPIRIIGPLEMESVSTDGWFSFEFTPLPHSRGQIYTFSLESDAITRDQAISVMGIKNHHLYWFFGKKVVKGSIAFKAVCIKHHEIYANFSQCRSHLEQGKVKVDHFPLQMRVEVSRLCNLKCIMCPHSDPHYNPAPNKVYFMSLETFQSLTPFLPYITVLSAFGLGEPFLNPEFLEILRYAKRLNPYLTIFVSTNGLSLKEEIIQPIIQEKLIQILQISIDSINPTTFEHIRRKGHYDKVIHHIKNWVTQRAVQKAEWLHLQVGMVVMKENANEIYDYICEMAELGVNAIRLDTVKSYEKLRVTDLASLHQILEQLERAKAFLKGKRTVLAGADTLIIEIERDIQRAKEQTRHHFSVNSKTIKASSQILPNTNLNEADNIKSTNESQLIPIIPNSQKKSGRHRLPLCSVPWESLMVAADGEVLLCCNNYKPMGSVNQSIETVWNNTSYQQVRQEMILGQPEPLCQSCLDALLVADQAIKGTYLDRRLSSENSAIVPPAIVGQAVNQMTISVHSHLTSHIICQSFYENRNEGLTDWQVPILGFLEINSSTTPLPHFIALALNGIIEAVATTHFFNSSCLKWRTEINGSLFRNGENHLEVFCVYHTHDQIHLSRSQPVQTLKPYSYLITHNNGREFIVDPHKTLIPVSQQALIGHLDEIEIENQNIFFRGWALDTNRLQLPEWIVIFLNNQYLYREKTWVERPDVVANVYDHQFTHFSWKERLKKRLGIHQEIGKNHNRLYSGFIIELPLVFFENIYSSSIRLFAISKSHIASELIYPNHSPCKLG
>NZ_AP014633.1|WP_045477539.1|4247131_4247392_+|hypothetical-protein
MTPVLLNNKLIRKDYFSNHHKRDSIAAKSWNYMPTYSELKIVRQRNFLSNGVTGWRGKRMSLDKKYDLIAMDITSNCNLRCPFCLK
>NZ_AP014633.1|WP_045477538.1|4244469_4247130_-|pyruvate-dehydrogenase-(acetyl-transferring),-homodimeric-type
MTDYTDIDSQETQEWLEALESVLEKEGPERAHFILESLIDKARRSGTYLPHRATTAYVNTIPHHLEERSPGNPELEWKIRSLVRWNAMAMVVQANRQSTELGGHIASFASAATLYDVGFNHFFQARSVTHGGDLVYFQGHSAPGIYARAFLEGRISEEQLLNFRQEVNGKGLSSYPHPWLMPDFWQFPTVSMGLGPIMAIYQARFMKYLHDRGLANTEGRKVWAFTGDGEMDEPESLGAIALAAREKLDNLIFVVNCNLQRLDGPVRGNGKIIQELEADFRGSGWNVIKVIWGSYWDPLFAMDMQGLLRKRMEECVDGEYQNYKAKGGAYTREHFFGKYPELKAIVAKMTDEDIWRLNRGGHDPHKIYAAYAAAVKHKGQPTVILAKTVKGYGMGMAGEGQNITHQQKKMGQDAIRAFRDRFNIPISDVQLADVPFYKPPTDSPEMKYLHEQRQALGGYLPIRSKIATPIEVPDLSIFDNMLKGTGDREISTTMAFVRMLSALTRDKKMGEYVVPIVPDEARTFGMEGLFRQLGIYSSQGQLYEPQDADQVMYYHEDKKGQILEEGICEAGAISSWIAAATAYSNHGINMVPFYIFYSMFGFQRVGDLIWAAGDMQARGFLFGGTAGRTTLSGEGLQHQDGHSLVMAANIPNCVAYDPTFAYEMAVIIHDGLRRMYKEQENIFYYLTAMNENYLHPAMPEGVQAGILKGMYLFKEGVKKTGPRVQLLGSGAILREAIAASSLLAEEFDVTADIWSVTSFTELRRQGLESQRWNMLHPEAEPRSCYVHECLKDRPGPVIAATDYVKLYADQIRACIPHASYYVLGTDGFGRSDSRKQLRKFFEIDRYYITVAALKGLADRGEIPATQVTEAIRKYELDADKPNPMTL
>NZ_AP014633.1|WP_045477537.1|4243093_4244458_-|dihydrolipoyllysine-residue-acetyltransferase
MALQAVTVPDIGDFKEVPILEILVKPGDPITVDQSIITLESDKATMEIPSSHAGIVQDIKVAVGDKVSVGSVILILDTTTEILTSPSVVEPVKITPAPLPSSTSTPIASSSSDSSRTAPAVAPSIMADLRRPKNLPPPPLQSIADQPFTKPHAGPAVRHLARELGVDLARVKGSGRHSRILKADVHNFVKQVMNEGSVPGLAIPLTGGGMGIPEIPAIDFSKFGDIEIRPLSRIQKLAGASLHRSWLNIPHVTQFDEADITELEQFRRDLAAEGERRQVKVTLLSLLLKACAAALKEFPTFNASLDSSKENLILKKYYHLGVAVDTPDGLVVPVIKDVANQGLFELAAHLRDLSQKARDKKLSPHEMQGACFTISSLGGIGGTAFTPIINAPEVAILGVSRAQLQPVYQNGELVPRLILPLSLSYDHRVIDGALAARFTQYLRFILSDVRRLLL
>NZ_AP014633.1|WP_045477536.1|4242733_4242943_-|type-II-toxin-antitoxin-system-VapB-family-antitoxin
MTTNTQLADKELLEEAQRLGGHKTKRETINEALKEYVRRRNQIEAIQHFGTIDFDPEFLAEIDRQSQPR
>NZ_AP014633.1|WP_045477535.1|4242072_4242705_+|hypothetical-protein
MAYSEFNLNKFIKTFNLHQSQEPLFNHIQPLEANPWLKETLAKGMQLVINSEKSRSELIVMPILLASRELNQNCFSIYSGENLDVNPEQGLKGECDFILTYTPVLPTIQSPIIVIVEAKKHDIENSLGQCAAQMLGARLFNNNAIETIFGCVTSGEIWQFLKLEAEWIHIDKNHYYINELENILGIFQTIINFYRVLLNKPGEPNEMVPS
>NZ_AP014633.1|WP_045477534.1|4241558_4242038_+|Uma2-family-endonuclease
MNWQEVCERSDLHNLPFKIELDEQGKIIMSPVKVYHSAFQGKIGALLDRLAKGHVLIECAIKTPKGTKVADIAWASGERFKRIIAEVECSIAPEVCVEVWSSTNTSAEIEEKQRLYFDTGCQEVWMCSKDGQIAFYNRAGRIENSILIPQFPQFVDLFA
>NZ_AP014633.1|WP_045477544.1|4260612_4266564_-|choice-of-anchor-D-domain-containing-protein
MRNHCRFFFGLPWKQTTLILTLLTIFPLYTEAVEPTIQASGSVSLLLRNDGVLFQLGGQSFTPATLPPTAIPPIQPKSAILTNVDSLPTLKDQHGSYEGYYGGMALAIASTPEVNRALFTWFPDSSDPTKSQPTPVSGLSEVKEIFLGASCYYCPSYFVITNTGTIFGLDGNNNATQLSGLSDVKLITADPSRYVALTNTGTVFYGNWNSSNNQYDPAIQIANLTNVTDIKYLNNVTYALAGGKVYGWTWVLDPATSTYLPTIVTAVKDAAGNELSQVKDLRWKNQTLAVTQAGTVVWWKWNEDNKVPTVALPITGLPNVAEIVGRYSSYLARTLTGDLYYWVWKESSNAPTSASQITLPSTSKVKTLFIPGGSSDFAVLNNKEVYSWYWDSSTSGNPSMPTQIQGSSNPKEIYYYYYPYYGYSYLSLTEGKEVYRINGNATLIPGLSNVKTIAIGSHQLFLQEDGILCGTGNNSGGQLGINAPNYISYDEPLCGIEDLIVEPNTVLTSLTVNKTGTGEGTVTADTGTIYCGTSCSGNYPQKQTVTLRAKPQIGSIFTGWSDNCTNTDSIIDPVTQVGKTKVTLTNAVTCTATFDQAPLRKLTVKKEGTGNGTVTVEPSPESGNLNCGSSTCTVNYKNLTEVTLTATPDADSQDTAEINCNNQDFILTKDRECTVTFTKLLANYPLNVSITSEDGSGGKVVSEPAGIDCNSDSCTKDFPNGTAVTLTPFPNPGSIVKEWYCGGYYNSASPATVTVKGRPAYCSISFRLPPIPSNIEVDPPSHKFKFEGVNNRLTQDFSISNTSVTNLRIDSIAVKGASDFRALEDNCSNTSKATNENCKISVAYEPHTDVTQTATLWISSDDPETPLTIPFCAGAYGSTTQETEVSPTNLDFGTEVVGNSSTQTQWIKTWTDGCGALIDQNKFKLNGTNATDFNIILKECYYAAWDDKTDKPNKTTYSTCQVNVKFLPTTLEGAKNAQLDYALNDPSLPTSSVPLAGVAVATSSAQPKLEVSASSLNFGEVTLYRSSPQSTLTIKNTGNVNLIPSIKLTDSDAADFSVIGGECTSQRVLFPGNSCNLSVQFVPQGTVGNKQASLIIAPDKSYATTVTLTGNSIEATDCAEANITIESSGSGYYWDSDDTNNAAWKRLPNLTSSAPPTDKDVVRIKSGHTFFGSANPNTVVKTLCIESGATLQSIDNQGTSLTIRATDFIGNWGTILGQDGANETEPCPTRTALGTGSCAKRGASVILKVSTADSGGPIVNEGTIKAGKGGSGSQYAAAGGDAIVLGRNVLNKNIIQAGDGGDISGTLEGESGPGGLTQVLGNFGGKGYLRSETSTQIAAGNGGYCNSSATEPQMGGKGGDLRLMTIPDVYIGGGNHRAGKSSYNCAKNRGDGRVGIEPSVISLAGANTKVEGGDIFIYGGPDWTLDLSNLSGTVVTATGNITLAVGEGGVIDLRGSSGKLFNAVGQVSLFADNILLDENQKLSDLIEASQIVVGPHKILRDVALTGATRVVGEPNTTTSLILTLANGSPVNDTFSLTVTDPGSWISSTLPATLDVAGLEVANLTLPVTLPAEIGMTDTITVTATSQADPTVTATINIQVEVVDLTLLIANPSSPPIEVVEPEIPTIEVVEPEIPSPPTVLPFTIEPVSVSSGCPTTGVIDFFCSNQGQILQDATLTSSASITGGTLAGMLTNQGLVSQVTIQAGATLTGGKLTGHIINEGTLENFEFVGAVIEGGTLAGTITNRSQSEGTIKNVNLAPNTKISRVNLQGNIVGDNNAPALLEHVTIKSNTFLSGVKLGEGVIVEANVTCGEGVQAPEGVCFPGEMELPPLPDLDATATNEQGESVPSNAAFYGGISVNNGAIEAQATPTLADEVTIQGQIQVDPAHVGQAGDVVVYVDYTPVGANEPIYVMLNEAGKPVDWDGNLSNLVPFKVIPKLAELIEVLMYQNKLPVMGMLNIGFGYRLAEDGLVIHNLKPIEVNINK
>NZ_AP014633.1|WP_083942647.1|4267026_4267233_-|hypothetical-protein
MGSQASLLWGLLFGSIGTGYFLYGKKQKKSVPFICGIGLMVFPMFVSNTILLVIVGCLLLAIPYFLRD
>NZ_AP014633.1|WP_045477545.1|4267386_4267686_-|DUF493-domain-containing-protein
MANNLSSTESAIPTNDTLFEFPCAFPIKVVGKTIEHFDLLIMEIVHRHCQDLTENTLITRTSRGGKYSAVTVTIMAQSRAQLDALYQELSAHEQIMMVF
>NZ_AP014633.1|WP_045477546.1|4267678_4268521_-|D-amino-acid-transaminase
MIVYLNGEFLPVESAKISVLDRGFIFGDGVYEVLPVYNGHLFRLAEHLQRLENSLQAIRLANPLSRQQWSDLLTQLVAHNHGGDQSIYLQVTRGPAKREHNFPHLIQPTVFMMSEAIQAQPPSPGVKAITCPDIRWQRCDIKAVALLANVLLRQQAVDVGAVEAILIRDGYVMEGAASNVFVVIDGITMTPPKSRYILPGITRDLILEVMQANQLPYQEVAITEAQLRSAVEIWVTSSVREILPITTLDEQTVGSGKPGPIWSQVWQLYQNYKQQLRSHG
>NZ_AP014633.1|WP_045477547.1|4268533_4269682_-|D-alanyl-D-alanine-carboxypeptidase
MKRKFNSLLFSFILLYSVLIQANTGFVVPPAPPITARAYILQDFHSGETLMANNADERLEPASLTKLMTAYLIFQKLRANKIQLTEPVKISETAWRMTGSRMYLEVGTSVTIEELLQGMIIQSGNDASMALAEFVAGSEAAFVSLMNQQAQQLGLTNTHFTNSTGLPHEQHYSTARDLALMARRLIQDFPEYYQRWYSKREFTYNNITQPNRNQLLWQDPTVDGVKTGYTASAGYCLISSAKRGNMRLISVVMGNKSRKERTQGSKEMLDYGFRFFETYPLYQAKQPLTTERIWQGKVNQIQLGLGETLYVTLPKDQQKQLNASIKVDKYLKAPIEAGKAYGTLKINLGEQVITKRPLVALASVEPGQLWKKLTDSFLLFFY
>NZ_AP014633.1|WP_083942648.1|4269803_4270346_-|hypothetical-protein
MPWQSINWPRRLHINMLKKIRFWNQINIVFLLILTACSMWTEKKPGETNKPLVQATPQPSIPRREANQSLPQKTQPQSIPNLSGYLEQGIARWYDVTENGAKTASGDIYDLYEMTAAHATLPLLSRVRVTNLRTGQRVIVTINDRLSDRSASIKLSYAAASQLGLVTNHSPVEIRGLPPT
>NZ_AP014633.1|WP_045477548.1|4270266_4271304_-|lytic-murein-transglycosylase-B
MSNQLNLLNVIQIFLNRTILVVSVLLLNAVNAMAQTITQERFITDMVERHQFDKSYLEYLFNHAKVRKSIIKAMTPHPTGKAKPWYQYRRIFIQDQRISDGVAFWHNHASILKRAEATYGVPPQIIIAIIGVETLYGQNQGNFRVIDALVTLSFHSSRRADFFREELEHYLLLTREEGFDPLQLQGSYAGAMGIGQFMPSSFRSYAVDFDGDGRRDIWNNYADAIGSVANYFHRFGWQSGQPIVKATQINPTALDTLLGLAFEPKYTLTQLQQFGLKYHGDELANTSGLFIDLETEQGPAYWLGFQNYYVITRYNHSKNYAMAVYQLAQEIAHQYAQENSLLESN
>NZ_AP014633.1|WP_045477549.1|4271340_4272435_-|rod-shape-determining-protein-RodA
MQTNWTSNHFFHLDKLLLLGILSLSVIGLVVLYSAGNQDWDLIIRQIIRLLMGFVVMFVLAQIRPQQVMAWTPWLYLVGLLLLILVLIIGEISKGSQRWLNLGLFRFQPSEMMKLVVPMMVTRYVTGKSLPPSYGRVIIAILITIIPVALVIKQPDLGTALLIGSSGMFVLFLAGLSWQLIFGVLALSSLCAPVMWFFMHDYQRQRIITFLNPEQDPLGTGYHIIQSEIAIGSGGLYGKGWLNGTQSHLEFLPERHTDFIFAVYSEELGLLGILLLLGIYLFIISRGLYIAMQAQSTAARLLAGSLTLAFFVYIVINMGMVTGLLPVVGLPLPLISYGGTSLVTLMAGFGLIMAVHTHRRFLSG
>NZ_AP014633.1|WP_045477550.1|4272513_4274400_-|penicillin-binding-protein-2
MLSTRFILKDSINENQIFYHRVIIAWIAVIVAILLIIGRLIFLQVVAHERYTTLSENNRLKIRPLPPNRGLIYDRNGVLLANNRVSYSLEIIPEQIKDMDKTLNELSQIIAINETDIAQFKKRLQQTRSFIPVPLRYRLTEEEKDRFSVQNYRFNGVQISSNLNRYYPLGPIGVHMIGYVGRINEHELEIIDQSNYMGSDYIGKTGVEGYYEKELHGKTGFQHVETNVQGRTVRILESMPSVPGKNLYLNIDIDLQQYAESLVAQHRAAIVAIEPNSGGVLALVSMPYYDPNLFVDGIDVKTYRELRDSPDRPLFNRAIRGQYPPGSTIKPFTGLAGLEYGVRTERSRTWCRGWYSLKGQSHRYRDWKKSGHGSMNLHSAIEQSCDVYFYDLAYDLGIDRLYSFLTRFSFGKKTGIDISGELSGLIPSPEWKQKLLVLDKQWYAGETIIAGIGQGYMLTTPLQLAVATATLSARGQFKQPRVVFAMEEEESFNEISLVPTHQETLSLKQESYWDAAIGGMKAVVHGSRGTAGKIGLHSPYYLAGKTGTAQVITIKQNERYNAKRIAKKFQDHALFVAFAPLDEPRIALAIIVENGGGGSKTAAPIAKQVMDYYLLRKPSLQVATKNSP
>NZ_AP014633.1|WP_045477551.1|4274471_4274960_-|rod-shape-determining-protein-MreD
MSLERHHGGWIIILSFVVSFMLAIMPLPSWAGVWRPDWVALVLIYWCIAIPQRIGIATGWLIGLTSDVLNETLLGQQALSLCLIAYISVKLHRRIRLFPLWQQAIGVLVLITLDQLLIAWIRGIQGQPLVDGSFIYPALTSMLLWPWVFILLRDLRRFYQVS

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_AP014633_3	3.32\|658593\|35\|NZ_AP014633\|CRISPRCasFinder,CRT,PILER-CR	658593-658627	35	NC_048797	Bacillus phage vB_BmeM-Goe8, complete genome	140857-140891	5	0.857
NZ_AP014633_3	3.32\|658593\|35\|NZ_AP014633\|CRISPRCasFinder,CRT,PILER-CR	658593-658627	35	NC_048797	Bacillus phage vB_BmeM-Goe8, complete genome	140862-140896	5	0.857
NZ_AP014633_10	10.1\|3648176\|28\|NZ_AP014633\|CRISPRCasFinder	3648176-3648203	28	NZ_CP022090	Shewanella sp. FDAARGOS_354 plasmid unnamed1, complete sequence	18190-18217	5	0.821
NZ_AP014633_3	3.32\|658593\|35\|NZ_AP014633\|CRISPRCasFinder,CRT,PILER-CR	658593-658627	35	NC_048797	Bacillus phage vB_BmeM-Goe8, complete genome	140852-140886	6	0.829
NZ_AP014633_3	3.32\|658593\|35\|NZ_AP014633\|CRISPRCasFinder,CRT,PILER-CR	658593-658627	35	NC_030925	Bacillus phage Shbh1, complete genome	27417-27451	6	0.829
NZ_AP014633_3	3.32\|658593\|35\|NZ_AP014633\|CRISPRCasFinder,CRT,PILER-CR	658593-658627	35	NC_030925	Bacillus phage Shbh1, complete genome	27422-27456	6	0.829
NZ_AP014633_3	3.32\|658593\|35\|NZ_AP014633\|CRISPRCasFinder,CRT,PILER-CR	658593-658627	35	NC_030925	Bacillus phage Shbh1, complete genome	27427-27461	6	0.829
NZ_AP014633_3	3.32\|658593\|35\|NZ_AP014633\|CRISPRCasFinder,CRT,PILER-CR	658593-658627	35	NC_030925	Bacillus phage Shbh1, complete genome	27412-27446	6	0.829
NZ_AP014633_7	7.3\|1776591\|32\|NZ_AP014633\|CRT	1776591-1776622	32	NZ_AP017376	Stanieria sp. NIES-3757 plasmid plasmid1 DNA, complete genome	110127-110158	6	0.812
NZ_AP014633_7	7.3\|1776591\|32\|NZ_AP014633\|CRT	1776591-1776622	32	NC_019765	Stanieria cyanosphaera PCC 7437 plasmid pSTA7437.01, complete sequence	107279-107310	6	0.812
NZ_AP014633_7	7.7\|1776867\|32\|NZ_AP014633\|CRT	1776867-1776898	32	AJ630128	Bacteriophage S-PM2 complete genome	157839-157870	6	0.812
NZ_AP014633_7	7.7\|1776867\|32\|NZ_AP014633\|CRT	1776867-1776898	32	NC_006820	Synechococcus phage S-PM2, complete genome	157839-157870	6	0.812
NZ_AP014633_7	7.7\|1776867\|32\|NZ_AP014633\|CRT	1776867-1776898	32	LN828717	Synechococcus phage S-PM2 spontaneous deletion mutant, complete genome	148295-148326	6	0.812
NZ_AP014633_3	3.28\|658302\|35\|NZ_AP014633\|CRISPRCasFinder,CRT,PILER-CR	658302-658336	35	MN694552	Marine virus AFVG_250M1051, complete genome	22202-22236	7	0.8
NZ_AP014633_3	3.28\|658302\|35\|NZ_AP014633\|CRISPRCasFinder,CRT,PILER-CR	658302-658336	35	MN693910	Marine virus AFVG_250M312, complete genome	21805-21839	7	0.8
NZ_AP014633_7	7.10\|1777074\|32\|NZ_AP014633\|CRT	1777074-1777105	32	MH884511	Exiguobacterium phage vB_EalM-132, complete genome	18086-18117	7	0.781
NZ_AP014633_3	3.10\|656995\|33\|NZ_AP014633\|CRISPRCasFinder,CRT,PILER-CR	656995-657027	33	NZ_CP017574	Bacillus thuringiensis strain SCG04-02 plasmid PSCG364, complete sequence	354753-354785	8	0.758
NZ_AP014633_7	7.5\|1776729\|32\|NZ_AP014633\|CRT	1776729-1776760	32	AP014279	Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S30-C67, * SEQUENCING IN PROGRESS *	5259-5290	8	0.75
NZ_AP014633_7	7.6\|1776798\|32\|NZ_AP014633\|CRT	1776798-1776829	32	AP014279	Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S30-C67, * SEQUENCING IN PROGRESS *	5259-5290	8	0.75
NZ_AP014633_7	7.10\|1777074\|32\|NZ_AP014633\|CRT	1777074-1777105	32	CP030497	Staphylococcus aureus strain ER02658.3 plasmid unnamed1, complete sequence	3106-3137	8	0.75
NZ_AP014633_7	7.10\|1777074\|32\|NZ_AP014633\|CRT	1777074-1777105	32	NZ_AP018563	Staphylococcus argenteus strain 58113 plasmid p1, complete sequence	30250-30281	8	0.75
NZ_AP014633_7	7.10\|1777074\|32\|NZ_AP014633\|CRT	1777074-1777105	32	NC_013327	Staphylococcus aureus plasmid pWBG749, complete sequence	14330-14361	8	0.75
NZ_AP014633_7	7.10\|1777074\|32\|NZ_AP014633\|CRT	1777074-1777105	32	NZ_CP029628	Staphylococcus aureus strain MOK042 plasmid unnamed, complete sequence	11031-11062	8	0.75
NZ_AP014633_7	7.10\|1777074\|32\|NZ_AP014633\|CRT	1777074-1777105	32	NZ_AP017923	Staphylococcus aureus strain JP02758 plasmid pJP080, complete sequence	29676-29707	8	0.75
NZ_AP014633_7	7.10\|1777074\|32\|NZ_AP014633\|CRT	1777074-1777105	32	NC_013325	Staphylococcus aureus plasmid pWBG745, complete sequence	25168-25199	8	0.75
NZ_AP014633_7	7.10\|1777074\|32\|NZ_AP014633\|CRT	1777074-1777105	32	CP030620	Staphylococcus aureus strain ER01524.3 plasmid unnamed1, complete sequence	23773-23804	8	0.75
NZ_AP014633_7	7.10\|1777074\|32\|NZ_AP014633\|CRT	1777074-1777105	32	CP030710	Staphylococcus aureus strain ER01174.3 plasmid unnamed1, complete sequence	19384-19415	8	0.75
NZ_AP014633_7	7.10\|1777074\|32\|NZ_AP014633\|CRT	1777074-1777105	32	NZ_CP012757	Staphylococcus aureus subsp. aureus strain JS395 plasmid, complete sequence	11547-11578	8	0.75
NZ_AP014633_7	7.10\|1777074\|32\|NZ_AP014633\|CRT	1777074-1777105	32	CP030674	Staphylococcus aureus strain ER01533.3 plasmid unnamed1, complete sequence	10380-10411	8	0.75
NZ_AP014633_7	7.10\|1777074\|32\|NZ_AP014633\|CRT	1777074-1777105	32	CP030482	Staphylococcus aureus strain ER03913.3 plasmid unnamed1, complete sequence	4370-4401	8	0.75
NZ_AP014633_7	7.10\|1777074\|32\|NZ_AP014633\|CRT	1777074-1777105	32	CP030679	Staphylococcus aureus strain ER00573.3 plasmid unnamed2, complete sequence	18730-18761	8	0.75
NZ_AP014633_7	7.10\|1777074\|32\|NZ_AP014633\|CRT	1777074-1777105	32	CP030603	Staphylococcus aureus strain ER00484.3 plasmid unnamed1, complete sequence	9070-9101	8	0.75
NZ_AP014633_3	3.13\|657207\|31\|NZ_AP014633\|CRISPRCasFinder,CRT,PILER-CR	657207-657237	31	NC_014533	Gloeothece verrucosa PCC 7822 plasmid Cy782201, complete sequence	103507-103537	9	0.71
NZ_AP014633_3	3.16\|657420\|35\|NZ_AP014633\|CRISPRCasFinder,CRT	657420-657454	35	NC_010474	Synechococcus sp. PCC 7002 plasmid pAQ7, complete sequence	39963-39997	9	0.743
NZ_AP014633_3	3.42\|659315\|34\|NZ_AP014633\|CRISPRCasFinder,CRT,PILER-CR	659315-659348	34	NZ_CP044049	Klebsiella variicola strain FDAARGOS_627 plasmid unnamed1, complete sequence	111953-111986	9	0.735
NZ_AP014633_7	7.5\|1776729\|32\|NZ_AP014633\|CRT	1776729-1776760	32	NZ_CP043058	Dolichospermum sp. UHCC 0315A plasmid pUHCC0315b, complete sequence	40457-40488	9	0.719
NZ_AP014633_7	7.6\|1776798\|32\|NZ_AP014633\|CRT	1776798-1776829	32	NZ_CP043058	Dolichospermum sp. UHCC 0315A plasmid pUHCC0315b, complete sequence	40457-40488	9	0.719
NZ_AP014633_7	7.7\|1776867\|32\|NZ_AP014633\|CRT	1776867-1776898	32	KJ019094	Synechococcus phage ACG-2014e isolate Syn7803US33, complete genome	38953-38984	9	0.719
NZ_AP014633_7	7.7\|1776867\|32\|NZ_AP014633\|CRT	1776867-1776898	32	KJ019156	Synechococcus phage ACG-2014e isolate Syn7803C2, complete genome	38953-38984	9	0.719
NZ_AP014633_7	7.7\|1776867\|32\|NZ_AP014633\|CRT	1776867-1776898	32	KJ019054	Synechococcus phage ACG-2014e isolate Syn7803C85, complete genome	38953-38984	9	0.719
NZ_AP014633_7	7.7\|1776867\|32\|NZ_AP014633\|CRT	1776867-1776898	32	MH115576	Acinetobacter phage AM106, complete genome	46009-46040	9	0.719
NZ_AP014633_7	7.7\|1776867\|32\|NZ_AP014633\|CRT	1776867-1776898	32	NZ_CP020434	Bacillus sp. FDAARGOS_235 plasmid 1, complete sequence	11048-11079	9	0.719
NZ_AP014633_7	7.7\|1776867\|32\|NZ_AP014633\|CRT	1776867-1776898	32	MN693812	Marine virus AFVG_250M1204, complete genome	19049-19080	9	0.719
NZ_AP014633_7	7.8\|1776936\|32\|NZ_AP014633\|CRT	1776936-1776967	32	NC_014533	Gloeothece verrucosa PCC 7822 plasmid Cy782201, complete sequence	17400-17431	9	0.719
NZ_AP014633_3	3.32\|658593\|35\|NZ_AP014633\|CRISPRCasFinder,CRT,PILER-CR	658593-658627	35	NC_030925	Bacillus phage Shbh1, complete genome	27432-27466	10	0.714
NZ_AP014633_7	7.7\|1776867\|32\|NZ_AP014633\|CRT	1776867-1776898	32	MN582059	Podoviridae sp. ct2cs2, complete genome	35407-35438	10	0.688
NZ_AP014633_3	3.32\|658593\|35\|NZ_AP014633\|CRISPRCasFinder,CRT,PILER-CR	658593-658627	35	MN693449	Marine virus AFVG_25M25, complete genome	5958-5992	11	0.686
NZ_AP014633_7	7.10\|1777074\|32\|NZ_AP014633\|CRT	1777074-1777105	32	MT774384	CrAssphage cr8_1, complete genome	15303-15334	11	0.656

1. spacer 3.32|658593|35|NZ_AP014633|CRISPRCasFinder,CRT,PILER-CR matches to NC_048797 (Bacillus phage vB_BmeM-Goe8, complete genome) position: , mismatch: 5, identity: 0.857

gtatagtacagtatagtatagtatagtatatccga	CRISPR spacer
gtatagtatagtatagtatagtatagtatagacat	Protospacer
********.*********************  *.

2. spacer 3.32|658593|35|NZ_AP014633|CRISPRCasFinder,CRT,PILER-CR matches to NC_048797 (Bacillus phage vB_BmeM-Goe8, complete genome) position: , mismatch: 5, identity: 0.857

gtatagtacagtatagtatagtatagtatatccga-	CRISPR spacer
gtatagtatagtatagtatagtatag-acatcctcc	Protospacer
********.***************** *.****

3. spacer 10.1|3648176|28|NZ_AP014633|CRISPRCasFinder matches to NZ_CP022090 (Shewanella sp. FDAARGOS_354 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.821

tagcattccaccatcaaagtttctgtct	CRISPR spacer
tgacattcctctatcaaagtttctgtcc	Protospacer
*..****** *.***************.

4. spacer 3.32|658593|35|NZ_AP014633|CRISPRCasFinder,CRT,PILER-CR matches to NC_048797 (Bacillus phage vB_BmeM-Goe8, complete genome) position: , mismatch: 6, identity: 0.829

-----gtatagtacagtatagtatagtatagtatatccga	CRISPR spacer
ctaaggtatagtatagtatagtatagtatagtata-----	Protospacer
     ********.*********************

5. spacer 3.32|658593|35|NZ_AP014633|CRISPRCasFinder,CRT,PILER-CR matches to NC_030925 (Bacillus phage Shbh1, complete genome) position: , mismatch: 6, identity: 0.829

-----gtatagtacagtatagtatagtatagtatatccga	CRISPR spacer
gtatagtatagtatagtatagtatagtatagtata-----	Protospacer
     ********.*********************

6. spacer 3.32|658593|35|NZ_AP014633|CRISPRCasFinder,CRT,PILER-CR matches to NC_030925 (Bacillus phage Shbh1, complete genome) position: , mismatch: 6, identity: 0.829

-----gtatagtacagtatagtatagtatagtatatccga	CRISPR spacer
gtatagtatagtatagtatagtatagtatagtata-----	Protospacer
     ********.*********************

7. spacer 3.32|658593|35|NZ_AP014633|CRISPRCasFinder,CRT,PILER-CR matches to NC_030925 (Bacillus phage Shbh1, complete genome) position: , mismatch: 6, identity: 0.829

gtatagtacagtatagtatagtatagtatatccga	CRISPR spacer
gtatagtatagtatagtatagtatagtataaggtg	Protospacer
********.*********************    .

8. spacer 3.32|658593|35|NZ_AP014633|CRISPRCasFinder,CRT,PILER-CR matches to NC_030925 (Bacillus phage Shbh1, complete genome) position: , mismatch: 6, identity: 0.829

-----gtatagtacagtatagtatagtatagtatatccga	CRISPR spacer
ataaggtatagtatagtatagtatagtatagtata-----	Protospacer
     ********.*********************

9. spacer 7.3|1776591|32|NZ_AP014633|CRT matches to NZ_AP017376 (Stanieria sp. NIES-3757 plasmid plasmid1 DNA, complete genome) position: , mismatch: 6, identity: 0.812

gcttagctgattatcccttaacacaaggccct	CRISPR spacer
agttagctaattatcctttaacacaaggcgat	Protospacer
. ******.*******.************  *

10. spacer 7.3|1776591|32|NZ_AP014633|CRT matches to NC_019765 (Stanieria cyanosphaera PCC 7437 plasmid pSTA7437.01, complete sequence) position: , mismatch: 6, identity: 0.812

gcttagctgattatcccttaacacaaggccct	CRISPR spacer
agttagctaattatcctttaacacaaggcgat	Protospacer
. ******.*******.************  *

11. spacer 7.7|1776867|32|NZ_AP014633|CRT matches to AJ630128 (Bacteriophage S-PM2 complete genome) position: , mismatch: 6, identity: 0.812

-gtctagatgatttaaatacaaatcaagctttc	CRISPR spacer
agtccata-gatttaaatacaaatccatctttg	Protospacer
 ***.* * **************** * ****

12. spacer 7.7|1776867|32|NZ_AP014633|CRT matches to NC_006820 (Synechococcus phage S-PM2, complete genome) position: , mismatch: 6, identity: 0.812

-gtctagatgatttaaatacaaatcaagctttc	CRISPR spacer
agtccata-gatttaaatacaaatccatctttg	Protospacer
 ***.* * **************** * ****

13. spacer 7.7|1776867|32|NZ_AP014633|CRT matches to LN828717 (Synechococcus phage S-PM2 spontaneous deletion mutant, complete genome) position: , mismatch: 6, identity: 0.812

-gtctagatgatttaaatacaaatcaagctttc	CRISPR spacer
agtccata-gatttaaatacaaatccatctttg	Protospacer
 ***.* * **************** * ****

14. spacer 3.28|658302|35|NZ_AP014633|CRISPRCasFinder,CRT,PILER-CR matches to MN694552 (Marine virus AFVG_250M1051, complete genome) position: , mismatch: 7, identity: 0.8

aagttttcgatttaagatagatgccgatgatgatg	CRISPR spacer
agatttaatatttaagatagatgccgacaatgatg	Protospacer
*..***   ******************..******

15. spacer 3.28|658302|35|NZ_AP014633|CRISPRCasFinder,CRT,PILER-CR matches to MN693910 (Marine virus AFVG_250M312, complete genome) position: , mismatch: 7, identity: 0.8

aagttttcgatttaagatagatgccgatgatgatg	CRISPR spacer
agatttaatatttaagatagatgccgacaatgatg	Protospacer
*..***   ******************..******

16. spacer 7.10|1777074|32|NZ_AP014633|CRT matches to MH884511 (Exiguobacterium phage vB_EalM-132, complete genome) position: , mismatch: 7, identity: 0.781

gtctagatgattataagacaaatcaagctttc	CRISPR spacer
ttctagatgattataagacctatcaagggcta	Protospacer
 ******************  ******  .*

17. spacer 3.10|656995|33|NZ_AP014633|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017574 (Bacillus thuringiensis strain SCG04-02 plasmid PSCG364, complete sequence) position: , mismatch: 8, identity: 0.758

cattaatttccttctaactactga-acaatcgca	CRISPR spacer
cattaatttccttataattactgagagaaatat-	Protospacer
************* ***.****** * ** ...

18. spacer 7.5|1776729|32|NZ_AP014633|CRT matches to AP014279 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S30-C67, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.75

---gcttaactgattacttcctaaaccaaggccct	CRISPR spacer
cacgttt---caattccttcctaaaccaaggcact	Protospacer
   *.**   ..*** **************** **

19. spacer 7.6|1776798|32|NZ_AP014633|CRT matches to AP014279 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S30-C67, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.75

---gcttaactgattacttcctaaaccaaggccct	CRISPR spacer
cacgttt---caattccttcctaaaccaaggcact	Protospacer
   *.**   ..*** **************** **

20. spacer 7.10|1777074|32|NZ_AP014633|CRT matches to CP030497 (Staphylococcus aureus strain ER02658.3 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

gtctagatgattataagacaaatcaagctttc	CRISPR spacer
ttctagatcattataagaaaaatcaatttgaa	Protospacer
 ******* ********* ******* .*

21. spacer 7.10|1777074|32|NZ_AP014633|CRT matches to NZ_AP018563 (Staphylococcus argenteus strain 58113 plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.75

gtctagatgattataagacaaatcaagctttc	CRISPR spacer
ttctagatcattataagaaaaatcaatttgaa	Protospacer
 ******* ********* ******* .*

22. spacer 7.10|1777074|32|NZ_AP014633|CRT matches to NC_013327 (Staphylococcus aureus plasmid pWBG749, complete sequence) position: , mismatch: 8, identity: 0.75

gtctagatgattataagacaaatcaagctttc	CRISPR spacer
ttctagatcattataagaaaaatcaatttgaa	Protospacer
 ******* ********* ******* .*

23. spacer 7.10|1777074|32|NZ_AP014633|CRT matches to NZ_CP029628 (Staphylococcus aureus strain MOK042 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

gtctagatgattataagacaaatcaagctttc	CRISPR spacer
ttctagatcattataagaaaaatcaatttgaa	Protospacer
 ******* ********* ******* .*

24. spacer 7.10|1777074|32|NZ_AP014633|CRT matches to NZ_AP017923 (Staphylococcus aureus strain JP02758 plasmid pJP080, complete sequence) position: , mismatch: 8, identity: 0.75

gtctagatgattataagacaaatcaagctttc	CRISPR spacer
ttctagatcattataagaaaaatcaatttgaa	Protospacer
 ******* ********* ******* .*

25. spacer 7.10|1777074|32|NZ_AP014633|CRT matches to NC_013325 (Staphylococcus aureus plasmid pWBG745, complete sequence) position: , mismatch: 8, identity: 0.75

gtctagatgattataagacaaatcaagctttc	CRISPR spacer
ttctagatcattataagaaaaatcaatttgaa	Protospacer
 ******* ********* ******* .*

26. spacer 7.10|1777074|32|NZ_AP014633|CRT matches to CP030620 (Staphylococcus aureus strain ER01524.3 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

gtctagatgattataagacaaatcaagctttc	CRISPR spacer
ttctagatcattataagaaaaatcaatttgaa	Protospacer
 ******* ********* ******* .*

27. spacer 7.10|1777074|32|NZ_AP014633|CRT matches to CP030710 (Staphylococcus aureus strain ER01174.3 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

gtctagatgattataagacaaatcaagctttc	CRISPR spacer
ttctagatcattataagaaaaatcaatttgaa	Protospacer
 ******* ********* ******* .*

28. spacer 7.10|1777074|32|NZ_AP014633|CRT matches to NZ_CP012757 (Staphylococcus aureus subsp. aureus strain JS395 plasmid, complete sequence) position: , mismatch: 8, identity: 0.75

gtctagatgattataagacaaatcaagctttc	CRISPR spacer
ttctagatcattataagaaaaatcaatttgaa	Protospacer
 ******* ********* ******* .*

29. spacer 7.10|1777074|32|NZ_AP014633|CRT matches to CP030674 (Staphylococcus aureus strain ER01533.3 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

gtctagatgattataagacaaatcaagctttc	CRISPR spacer
ttctagatcattataagaaaaatcaatttgaa	Protospacer
 ******* ********* ******* .*

30. spacer 7.10|1777074|32|NZ_AP014633|CRT matches to CP030482 (Staphylococcus aureus strain ER03913.3 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

gtctagatgattataagacaaatcaagctttc	CRISPR spacer
ttctagatcattataagaaaaatcaatttgaa	Protospacer
 ******* ********* ******* .*

31. spacer 7.10|1777074|32|NZ_AP014633|CRT matches to CP030679 (Staphylococcus aureus strain ER00573.3 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

gtctagatgattataagacaaatcaagctttc	CRISPR spacer
ttctagatcattataagaaaaatcaatttgaa	Protospacer
 ******* ********* ******* .*

32. spacer 7.10|1777074|32|NZ_AP014633|CRT matches to CP030603 (Staphylococcus aureus strain ER00484.3 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

gtctagatgattataagacaaatcaagctttc	CRISPR spacer
ttctagatcattataagaaaaatcaatttgaa	Protospacer
 ******* ********* ******* .*

33. spacer 3.13|657207|31|NZ_AP014633|CRISPRCasFinder,CRT,PILER-CR matches to NC_014533 (Gloeothece verrucosa PCC 7822 plasmid Cy782201, complete sequence) position: , mismatch: 9, identity: 0.71

gccatcgtctgggaaaaagctttttattgag	CRISPR spacer
taaatcatctgggaataagctttttagtatc	Protospacer
   ***.******** ********** *.

34. spacer 3.16|657420|35|NZ_AP014633|CRISPRCasFinder,CRT matches to NC_010474 (Synechococcus sp. PCC 7002 plasmid pAQ7, complete sequence) position: , mismatch: 9, identity: 0.743

tttaaaataatttaacttaggattat-----ccaattttt	CRISPR spacer
tttaaaatactttaacttaggagtataaacagcag-----	Protospacer
********* ************ ***      **.

35. spacer 3.42|659315|34|NZ_AP014633|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP044049 (Klebsiella variicola strain FDAARGOS_627 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.735

cttgtggggttttcccaactcgggcagttcagtt	CRISPR spacer
ccgattgagttttcccaactccggcagctcagca	Protospacer
*. .* *.************* *****.****.

36. spacer 7.5|1776729|32|NZ_AP014633|CRT matches to NZ_CP043058 (Dolichospermum sp. UHCC 0315A plasmid pUHCC0315b, complete sequence) position: , mismatch: 9, identity: 0.719

gcttaactgattacttcctaaaccaaggccct	CRISPR spacer
gattaattgactacttcctaaaccatactggt	Protospacer
* ****.***.************** . .  *

37. spacer 7.6|1776798|32|NZ_AP014633|CRT matches to NZ_CP043058 (Dolichospermum sp. UHCC 0315A plasmid pUHCC0315b, complete sequence) position: , mismatch: 9, identity: 0.719

gcttaactgattacttcctaaaccaaggccct	CRISPR spacer
gattaattgactacttcctaaaccatactggt	Protospacer
* ****.***.************** . .  *

38. spacer 7.7|1776867|32|NZ_AP014633|CRT matches to KJ019094 (Synechococcus phage ACG-2014e isolate Syn7803US33, complete genome) position: , mismatch: 9, identity: 0.719

gtctagatgatttaaatacaaatcaagctttc	CRISPR spacer
tactagttgatttaaatgcaaatcaacaatgg	Protospacer
  **** **********.********   *

39. spacer 7.7|1776867|32|NZ_AP014633|CRT matches to KJ019156 (Synechococcus phage ACG-2014e isolate Syn7803C2, complete genome) position: , mismatch: 9, identity: 0.719

gtctagatgatttaaatacaaatcaagctttc	CRISPR spacer
tactagttgatttaaatgcaaatcaacaatgg	Protospacer
  **** **********.********   *

40. spacer 7.7|1776867|32|NZ_AP014633|CRT matches to KJ019054 (Synechococcus phage ACG-2014e isolate Syn7803C85, complete genome) position: , mismatch: 9, identity: 0.719

gtctagatgatttaaatacaaatcaagctttc	CRISPR spacer
tactagttgatttaaatgcaaatcaacaatgg	Protospacer
  **** **********.********   *

41. spacer 7.7|1776867|32|NZ_AP014633|CRT matches to MH115576 (Acinetobacter phage AM106, complete genome) position: , mismatch: 9, identity: 0.719

gtctagatgatttaaatacaaatcaagctttc	CRISPR spacer
taatgattgatttaaaaacaaaacaagctttt	Protospacer
   *.. ********* ***** ********.

42. spacer 7.7|1776867|32|NZ_AP014633|CRT matches to NZ_CP020434 (Bacillus sp. FDAARGOS_235 plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.719

gtctagatgatttaaatacaaatcaagctttc	CRISPR spacer
gtctagatgttttaaataaaaatttatataaa	Protospacer
********* ******** ****. *  *

43. spacer 7.7|1776867|32|NZ_AP014633|CRT matches to MN693812 (Marine virus AFVG_250M1204, complete genome) position: , mismatch: 9, identity: 0.719

gtctagatgatttaaatacaaatcaagctttc	CRISPR spacer
gtctaaatgatttatatacaaatgagtggatg	Protospacer
*****.******** ******** *.    *

44. spacer 7.8|1776936|32|NZ_AP014633|CRT matches to NC_014533 (Gloeothece verrucosa PCC 7822 plasmid Cy782201, complete sequence) position: , mismatch: 9, identity: 0.719

agttagccaattaccatccaacacaaggtgct	CRISPR spacer
aaaacggcaattaccatccatcacaagctggc	Protospacer
*.   * ************* ****** ** .

45. spacer 3.32|658593|35|NZ_AP014633|CRISPRCasFinder,CRT,PILER-CR matches to NC_030925 (Bacillus phage Shbh1, complete genome) position: , mismatch: 10, identity: 0.714

gtatagtacagtatagtatagtatagtatatccga	CRISPR spacer
gtatagtatagtatagtatagtataaggtgaggag	Protospacer
********.****************. .*.   ..

46. spacer 7.7|1776867|32|NZ_AP014633|CRT matches to MN582059 (Podoviridae sp. ct2cs2, complete genome) position: , mismatch: 10, identity: 0.688

gtctagatgatttaaatacaaatcaagctttc	CRISPR spacer
tggtagatgattgaaataccaatcaaagataa	Protospacer
   ********* ****** ******.  *

47. spacer 3.32|658593|35|NZ_AP014633|CRISPRCasFinder,CRT,PILER-CR matches to MN693449 (Marine virus AFVG_25M25, complete genome) position: , mismatch: 11, identity: 0.686

gtatagtacagtatagtatagtatagtatatccga	CRISPR spacer
acaatataaagtatactatagtatagtatattaat	Protospacer
..*  .** ****** ***************. .

48. spacer 7.10|1777074|32|NZ_AP014633|CRT matches to MT774384 (CrAssphage cr8_1, complete genome) position: , mismatch: 11, identity: 0.656

gtctagatgattataagacaaatcaagctttc	CRISPR spacer
aaatagatgattataagacacttcaaaaaact	Protospacer
.  *****************  ****.   ..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

131148 : 188596

Bacillus_phage(15.38%)

protease,tRNA,transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045471576.1\|131148_132213_-\|protease	membrane protease subunit, stomatin/prohibitin	NA	NA	NA	NA
WP_052491611.1\|132536_133592_+	VWA domain-containing protein	NA	NA	NA	NA
WP_052492207.1\|134045_134201_+	hypothetical protein	NA	NA	NA	NA
WP_045478495.1\|134187_134433_+	Txe/YoeB family addiction module toxin	NA	NA	NA	NA
WP_083942402.1\|134474_134969_-	hypothetical protein	NA	NA	NA	NA
WP_052491612.1\|135445_136165_+	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_045471585.1\|136190_136958_+	glutaminyl-peptide cyclotransferase	NA	NA	NA	NA
WP_045471588.1\|137106_137481_-	hypothetical protein	NA	NA	NA	NA
WP_045471591.1\|137729_139031_+	DUF418 domain-containing protein	NA	NA	NA	NA
WP_045471594.1\|139136_140045_-	hypothetical protein	NA	NA	NA	NA
WP_045471596.1\|140441_141713_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA
WP_045471599.1\|141724_142012_-	YggU family protein	NA	NA	NA	NA
WP_045471602.1\|142627_142999_-	hypothetical protein	NA	NA	NA	NA
WP_045471605.1\|143055_144024_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA
WP_045471608.1\|144365_145343_-	MoxR family ATPase	NA	NA	NA	NA
WP_045471611.1\|145357_146554_-	DUF4350 domain-containing protein	NA	NA	NA	NA
WP_045471614.1\|146550_148878_-	CHAT domain-containing protein	NA	NA	NA	NA
WP_045471617.1\|150537_151491_+	hypothetical protein	NA	NA	NA	NA
WP_045471621.1\|151504_151873_+	hypothetical protein	NA	NA	NA	NA
WP_045471624.1\|151957_152551_-	hypothetical protein	NA	NA	NA	NA
WP_045471627.1\|152686_153145_-	hypothetical protein	NA	NA	NA	NA
WP_052491614.1\|153158_154460_-	hypothetical protein	NA	NA	NA	NA
WP_045478503.1\|155287_155953_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.7e-33	38.8
WP_045471630.1\|155949_157167_+	ABC transporter permease	NA	NA	NA	NA
WP_045471632.1\|157159_157912_+	outer membrane lipoprotein-sorting protein	NA	NA	NA	NA
WP_045471634.1\|158040_159141_+	hypothetical protein	NA	NA	NA	NA
WP_045471636.1\|159306_161334_-\|tRNA	methionine--tRNA ligase	A0A1V0S905	Catovirus	3.9e-25	23.8
WP_045471638.1\|161643_163587_-	hypothetical protein	NA	NA	NA	NA
WP_045471640.1\|163999_164272_-	HU family DNA-binding protein	A7KV42	Bacillus_phage	1.1e-20	65.2
WP_045471643.1\|164407_166840_-	endopeptidase La	A0A0R6PGP8	Moraxella_phage	3.5e-214	51.3
WP_045471646.1\|166995_168276_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	9.6e-131	56.5
WP_045471649.1\|168335_168974_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	A0A223W000	Agrobacterium_phage	6.6e-56	54.8
WP_045471652.1\|168983_170288_-	trigger factor	NA	NA	NA	NA
WP_045471655.1\|171344_171608_-	YfhL family 4Fe-4S dicluster ferredoxin	A0A1B1IWY9	uncultured_Mediterranean_phage	5.7e-22	60.0
WP_045471658.1\|171708_172188_-	pantetheine-phosphate adenylyltransferase	A0A1B1IVQ3	uncultured_Mediterranean_phage	3.1e-26	45.9
WP_045471661.1\|172285_173311_-	porphobilinogen synthase	NA	NA	NA	NA
WP_045471664.1\|173464_174745_+	TIR domain-containing protein	NA	NA	NA	NA
WP_045471666.1\|175222_177613_+\|tRNA	phenylalanine--tRNA ligase subunit beta	NA	NA	NA	NA
WP_045471668.1\|177615_177918_+	integration host factor subunit alpha	A0A0H3UZA0	Geobacillus_virus	8.9e-11	36.7
WP_045471670.1\|177895_178261_+	MerR family transcriptional regulator	NA	NA	NA	NA
WP_045471673.1\|178344_178701_+	iron-sulfur cluster insertion protein ErpA	A0A2H4N7M3	Lake_Baikal_phage	2.1e-27	53.7
WP_045471675.1\|178844_179057_+	hypothetical protein	NA	NA	NA	NA
WP_083942687.1\|179343_180573_+\|transposase	transposase	A0A1V0SEV1	Hokovirus	7.3e-19	24.9
WP_045471679.1\|180582_181005_+	hypothetical protein	NA	NA	NA	NA
WP_045471682.1\|181080_181680_-	hypothetical protein	NA	NA	NA	NA
WP_045471685.1\|181750_182884_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	S6AND0	Bacillus_phage	2.0e-71	42.4
WP_045471687.1\|184019_184478_+	hypothetical protein	NA	NA	NA	NA
WP_045471689.1\|184612_185077_+	hypothetical protein	NA	NA	NA	NA
WP_083942403.1\|185318_187274_+\|protease	M6 family metalloprotease domain-containing protein	NA	NA	NA	NA
WP_045471692.1\|187468_187696_-	hypothetical protein	NA	NA	NA	NA
WP_045471695.1\|187741_188596_-\|transposase	Rpn family recombination-promoting nuclease/putative transposase	E9P639	Wolbachia_endosymbiont_wVitB_of_Nasonia_vitripennis_phage	1.7e-35	40.6

DBSCAN-SWA_2

2411928 : 2462004

Escherichia_phage(16.67%)

protease,tail,plate,transposase,integrase

attL 2410762:2410821|attR 2459667:2459746

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2410762:2410821	attL	NA	NA	NA	NA
WP_045475113.1\|2411928_2412672_+\|transposase	transposase	NA	NA	NA	NA
WP_045475115.1\|2412753_2413020_+	hypothetical protein	NA	NA	NA	NA
WP_045475116.1\|2413117_2415421_-	hypothetical protein	E3SIT4	Synechococcus_phage	3.4e-17	26.9
WP_045475118.1\|2415465_2416020_-	hypothetical protein	NA	NA	NA	NA
WP_045475121.1\|2416329_2418927_-	hypothetical protein	NA	NA	NA	NA
WP_045475123.1\|2418929_2420723_-	hypothetical protein	A0A1Q1PVP2	Phage_DP-2017a	2.4e-34	25.2
WP_045475125.1\|2420894_2421293_-	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA
WP_045475127.1\|2421298_2421532_-	AbrB family transcriptional regulator	NA	NA	NA	NA
WP_045475129.1\|2421714_2422032_-	HigA family addiction module antidote protein	A0A222YWD7	Escherichia_phage	7.1e-11	39.1
WP_045475131.1\|2422031_2422310_-	peptidase	A0A2L1IV28	Escherichia_phage	1.1e-20	52.2
WP_045475134.1\|2422528_2422711_-	hypothetical protein	NA	NA	NA	NA
WP_045475136.1\|2422707_2422911_-	hypothetical protein	NA	NA	NA	NA
WP_045475139.1\|2423332_2423572_+	hypothetical protein	NA	NA	NA	NA
WP_045475141.1\|2424212_2424578_-	hypothetical protein	NA	NA	NA	NA
WP_045475143.1\|2424591_2426511_-	hypothetical protein	NA	NA	NA	NA
WP_045475146.1\|2426524_2427052_-	hypothetical protein	NA	NA	NA	NA
WP_045475149.1\|2427038_2429900_-	hypothetical protein	NA	NA	NA	NA
WP_045475151.1\|2429903_2431820_-\|plate	putative baseplate assembly protein	A0A1B1IUR1	uncultured_Mediterranean_phage	1.1e-08	35.4
WP_083942547.1\|2432127_2432523_-	GPW/gp25 family protein	NA	NA	NA	NA
WP_045475155.1\|2432497_2432854_-	hypothetical protein	NA	NA	NA	NA
WP_052491922.1\|2432884_2433745_-	hypothetical protein	J9PUM0	Bacillus_phage	1.4e-05	37.3
WP_045475157.1\|2433879_2434989_-	phage late control D family protein	NA	NA	NA	NA
WP_045475160.1\|2434991_2435516_-	hypothetical protein	NA	NA	NA	NA
WP_052491923.1\|2435520_2436243_-	hypothetical protein	NA	NA	NA	NA
WP_045475162.1\|2436429_2436693_-	Txe/YoeB family addiction module toxin	NA	NA	NA	NA
WP_052491924.1\|2436679_2436964_-	DUF2281 domain-containing protein	NA	NA	NA	NA
WP_045475165.1\|2437215_2437824_-	hypothetical protein	NA	NA	NA	NA
WP_052491925.1\|2438038_2439139_-	DUF4157 domain-containing protein	NA	NA	NA	NA
WP_052491926.1\|2439191_2441279_-	ATP-binding protein	K9MCS8	Sulfolobus_virus	3.6e-10	33.8
WP_045475167.1\|2441275_2442106_-	DUF4255 domain-containing protein	NA	NA	NA	NA
WP_045475169.1\|2442108_2443488_-	hypothetical protein	NA	NA	NA	NA
WP_045475172.1\|2443474_2444377_-	hypothetical protein	NA	NA	NA	NA
WP_045475175.1\|2444554_2445058_-\|tail	phage tail protein	NA	NA	NA	NA
WP_083942548.1\|2445077_2446907_-\|tail	phage tail sheath family protein	J9PVC2	Bacillus_phage	1.0e-45	31.8
WP_045479663.1\|2447297_2447528_+	DUF433 domain-containing protein	NA	NA	NA	NA
WP_045475178.1\|2447524_2447887_+	DUF5615 family PIN-like protein	NA	NA	NA	NA
WP_045475181.1\|2448089_2448308_+	hypothetical protein	NA	NA	NA	NA
WP_045475183.1\|2448273_2448654_+	type II toxin-antitoxin system PemK/MazF family toxin	NA	NA	NA	NA
WP_045475185.1\|2448943_2450161_-	hypothetical protein	NA	NA	NA	NA
WP_045475187.1\|2450212_2450980_-	hypothetical protein	H7BV89	unidentified_phage	3.4e-06	33.3
WP_045475190.1\|2451181_2451586_+	hypothetical protein	NA	NA	NA	NA
WP_045475193.1\|2451585_2451897_+	nucleotidyltransferase domain-containing protein	NA	NA	NA	NA
WP_045475196.1\|2451921_2452131_-	type II toxin-antitoxin system HicB family antitoxin	NA	NA	NA	NA
WP_045475198.1\|2452330_2452588_-	DUF2442 domain-containing protein	NA	NA	NA	NA
WP_045475201.1\|2452571_2452799_-	DUF4160 domain-containing protein	NA	NA	NA	NA
WP_045475203.1\|2453098_2454067_-	L,D-transpeptidase	NA	NA	NA	NA
WP_045475206.1\|2454193_2454409_+	hypothetical protein	NA	NA	NA	NA
WP_083942549.1\|2454606_2454972_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_045475208.1\|2455065_2455338_+	hypothetical protein	NA	NA	NA	NA
WP_045475210.1\|2455410_2458005_+	DUF3987 domain-containing protein	A0A2D1GN57	Marinobacter_phage	1.5e-26	30.7
WP_045475213.1\|2458097_2458391_+	hypothetical protein	NA	NA	NA	NA
WP_045475216.1\|2458387_2459566_-\|integrase	tyrosine-type recombinase/integrase	A0A0R6PGY7	Moraxella_phage	1.4e-48	34.0
WP_045475218.1\|2459940_2460774_-	hypothetical protein	NA	NA	NA	NA
2459667:2459746	attR	NA	NA	NA	NA
WP_052491930.1\|2460939_2462004_-\|protease	serine protease	A0A1L3KJP6	Hubei_virga-like_virus	5.2e-13	28.9

DBSCAN-SWA_3

2631617 : 2735615

Wolbachia_phage(25.0%)

transposase,integrase

attL 2642402:2642420|attR 2735613:2735631

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045475454.1\|2631617_2632532_-\|transposase	Rpn family recombination-promoting nuclease/putative transposase	A0A1B2LRR6	Wolbachia_phage	3.6e-23	32.4
WP_045475456.1\|2632556_2633936_-	mechanosensitive ion channel	NA	NA	NA	NA
WP_045475458.1\|2633991_2635959_-	HAMP domain-containing protein	NA	NA	NA	NA
WP_083942558.1\|2636138_2637629_-	hypothetical protein	NA	NA	NA	NA
WP_045475462.1\|2637885_2638119_-	hypothetical protein	NA	NA	NA	NA
WP_045479773.1\|2638121_2638397_-	BrnT family toxin	NA	NA	NA	NA
WP_052491956.1\|2639629_2639950_-	acyl carrier protein	NA	NA	NA	NA
WP_083942559.1\|2640046_2640469_-	hypothetical protein	A0A218MNH3	uncultured_virus	2.6e-08	30.0
WP_083942560.1\|2640484_2641363_-	hypothetical protein	NA	NA	NA	NA
2642402:2642420	attL	NA	NA	NA	NA
WP_052491959.1\|2643445_2644735_+	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA
WP_045475470.1\|2644952_2658920_+	FkbM family methyltransferase	D0R7J2	Paenibacillus_phage	2.0e-27	26.1
WP_083942710.1\|2676670_2677930_+	acyltransferase domain-containing protein	NA	NA	NA	NA
WP_045475474.1\|2678003_2678795_+	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_045475476.1\|2679143_2679998_+	3-hydroxyacyl-CoA dehydrogenase family protein	NA	NA	NA	NA
WP_045475478.1\|2680013_2680256_+	acyl carrier protein	NA	NA	NA	NA
WP_045475480.1\|2680286_2681450_+	acyl-CoA dehydrogenase	NA	NA	NA	NA
WP_045475482.1\|2681446_2682475_+	HAD-IIIC family phosphatase	NA	NA	NA	NA
WP_052491960.1\|2683175_2691953_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_083942711.1\|2709869_2710979_+	hypothetical protein	NA	NA	NA	NA
WP_045475485.1\|2711114_2711501_+	hypothetical protein	NA	NA	NA	NA
WP_052491961.1\|2712364_2712997_+\|transposase	transposase	NA	NA	NA	NA
WP_045475487.1\|2714296_2716582_+	ACP S-malonyltransferase	NA	NA	NA	NA
WP_045475489.1\|2717152_2718421_+	hypothetical protein	NA	NA	NA	NA
WP_045475491.1\|2719299_2719527_-	HNH endonuclease	NA	NA	NA	NA
WP_045475492.1\|2719803_2721063_+	hydroxymethylglutaryl-CoA synthase family protein	NA	NA	NA	NA
WP_045475493.1\|2721062_2721818_+	enoyl-CoA hydratase/isomerase	NA	NA	NA	NA
WP_045475495.1\|2722248_2722440_+\|transposase	transposase	NA	NA	NA	NA
WP_045475497.1\|2722507_2722798_+	hypothetical protein	NA	NA	NA	NA
WP_045475499.1\|2723019_2723319_-	hypothetical protein	NA	NA	NA	NA
WP_083942561.1\|2723897_2724155_-	hypothetical protein	NA	NA	NA	NA
WP_083942562.1\|2724295_2724526_+	hypothetical protein	NA	NA	NA	NA
WP_045475501.1\|2724567_2724789_-	hypothetical protein	NA	NA	NA	NA
WP_045475502.1\|2724884_2725082_-	hypothetical protein	NA	NA	NA	NA
WP_083942563.1\|2725123_2725366_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_045475504.1\|2725429_2725711_-\|integrase	site-specific integrase	NA	NA	NA	NA
WP_045475507.1\|2725905_2726091_-	hypothetical protein	NA	NA	NA	NA
WP_045475508.1\|2726407_2727118_-	hypothetical protein	NA	NA	NA	NA
WP_045474052.1\|2727995_2728178_+	hypothetical protein	NA	NA	NA	NA
WP_045473895.1\|2728174_2728441_-	hypothetical protein	NA	NA	NA	NA
WP_045475510.1\|2728798_2729077_-	hypothetical protein	NA	NA	NA	NA
WP_083942475.1\|2729184_2729448_-	hypothetical protein	NA	NA	NA	NA
WP_052491779.1\|2729535_2729808_-	hypothetical protein	NA	NA	NA	NA
WP_052491964.1\|2730271_2730814_-	hypothetical protein	NA	NA	NA	NA
WP_045475512.1\|2730948_2731140_-	hypothetical protein	NA	NA	NA	NA
WP_045475514.1\|2731739_2734076_+	hypothetical protein	A0A1V0SGR7	Hokovirus	3.8e-16	29.2
WP_045475516.1\|2735030_2735219_+	MerR family transcriptional regulator	NA	NA	NA	NA
WP_083942564.1\|2735207_2735615_-\|transposase	transposase	NA	NA	NA	NA
2735613:2735631	attR	NA	NA	NA	NA

DBSCAN-SWA_4

2851327 : 2921597

Lake_Baikal_phage(14.29%)

protease,integrase,tRNA,transposase

attL 2893550:2893565|attR 2922160:2922175

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045475758.1\|2851327_2851843_+\|protease	TIGR02281 family clan AA aspartic protease	NA	NA	NA	NA
WP_045475761.1\|2851856_2852723_+	carboxylating nicotinate-nucleotide diphosphorylase	NA	NA	NA	NA
WP_052491974.1\|2852706_2854644_+	adenylate/guanylate cyclase domain-containing protein	A0A2H4N7Z5	Lake_Baikal_phage	1.4e-19	26.0
WP_045475764.1\|2854737_2855466_+	DUF928 domain-containing protein	NA	NA	NA	NA
WP_045475766.1\|2855881_2856781_-	cation transporter	NA	NA	NA	NA
WP_045475768.1\|2856796_2858107_-	TolC family outer membrane protein	NA	NA	NA	NA
WP_045475769.1\|2858236_2863600_-	tandem-95 repeat protein	M1ID94	Pelagibacter_phage	5.1e-08	25.7
WP_045475770.1\|2864229_2864808_+	redoxin domain-containing protein	NA	NA	NA	NA
WP_045475771.1\|2864826_2865444_-	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA
WP_045475772.1\|2865497_2867771_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.1e-174	43.7
WP_045475774.1\|2867898_2868219_-\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	2.5e-11	46.3
WP_045475776.1\|2868452_2868884_+	RDD family protein	NA	NA	NA	NA
WP_045475777.1\|2869381_2875528_-	choice-of-anchor D domain-containing protein	NA	NA	NA	NA
WP_045475779.1\|2876535_2877396_-	RNA polymerase sigma factor RpoH	A0A248SJA5	Salicola_phage	1.6e-41	38.5
WP_045475781.1\|2877547_2878555_+	phosphotransferase	NA	NA	NA	NA
WP_045475782.1\|2878596_2879265_+	nucleotidyltransferase family protein	NA	NA	NA	NA
WP_045475784.1\|2879411_2879768_-	50S ribosomal protein L20	NA	NA	NA	NA
WP_045475786.1\|2879780_2879978_-	50S ribosomal protein L35	NA	NA	NA	NA
WP_045475790.1\|2882806_2883529_+	hypothetical protein	NA	NA	NA	NA
WP_052491975.1\|2883546_2884530_-	DnaJ domain-containing protein	NA	NA	NA	NA
WP_045475791.1\|2884750_2885368_-	nitroreductase family protein	NA	NA	NA	NA
WP_045475793.1\|2885427_2890908_-	AAA family ATPase	A0A1V0SGX0	Hokovirus	4.1e-29	36.1
WP_045475795.1\|2891153_2892050_+	hypothetical protein	NA	NA	NA	NA
WP_045475796.1\|2892147_2892681_-	hypothetical protein	NA	NA	NA	NA
2893550:2893565	attL	NA	NA	NA	NA
WP_052491976.1\|2894067_2894499_+	cyclic nucleotide-binding domain-containing protein	NA	NA	NA	NA
WP_045475798.1\|2894683_2897530_+	hypothetical protein	NA	NA	NA	NA
WP_052491977.1\|2897609_2898008_-	PH domain-containing protein	NA	NA	NA	NA
WP_045475799.1\|2898257_2899202_+	histone deacetylase	NA	NA	NA	NA
WP_045475801.1\|2899311_2899890_-	Uma2 family endonuclease	NA	NA	NA	NA
WP_045475802.1\|2900019_2901429_-	CSLREA domain-containing protein	NA	NA	NA	NA
WP_045475804.1\|2902172_2902592_+	hypothetical protein	NA	NA	NA	NA
WP_045475806.1\|2902667_2903063_-	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA
WP_083942713.1\|2903059_2903278_-	DUF2281 domain-containing protein	NA	NA	NA	NA
WP_045475809.1\|2903431_2905351_-	filamentous hemagglutinin N-terminal domain-containing protein	NA	NA	NA	NA
WP_045475811.1\|2905433_2907863_-	CHAT domain-containing protein	NA	NA	NA	NA
WP_045475813.1\|2908016_2908952_+\|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	NA	NA	NA	NA
WP_045475815.1\|2909065_2909344_+	RNA chaperone Hfq	NA	NA	NA	NA
WP_045475816.1\|2909428_2910730_+	GTPase HflX	NA	NA	NA	NA
WP_045475818.1\|2910940_2912098_+\|protease	FtsH protease activity modulator HflK	NA	NA	NA	NA
WP_083942714.1\|2912100_2913084_+\|protease	protease modulator HflC	NA	NA	NA	NA
WP_045475820.1\|2913224_2913410_+	DUF2065 domain-containing protein	NA	NA	NA	NA
WP_045475822.1\|2913448_2914696_+	hypothetical protein	NA	NA	NA	NA
WP_045475824.1\|2914749_2916042_+	adenylosuccinate synthase	A0A291AUF9	Pandoravirus	1.7e-58	31.7
WP_045479865.1\|2916322_2917018_+	pirin family protein	NA	NA	NA	NA
WP_083942570.1\|2917132_2918047_-	hypothetical protein	NA	NA	NA	NA
WP_045475827.1\|2918085_2919792_-	hypothetical protein	NA	NA	NA	NA
WP_052491978.1\|2920223_2920478_-	hypothetical protein	NA	NA	NA	NA
WP_052491979.1\|2920571_2920982_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_083942715.1\|2921032_2921179_-	hypothetical protein	NA	NA	NA	NA
WP_045475828.1\|2921198_2921597_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
2922160:2922175	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_AP014633

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CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

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Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection