Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_AP014523 Helicobacter pylori NY40 3 crisprs cas14j,DEDDh,cas3,cas2 2 0 130 0

Results visualization

1. NZ_AP014523
Click the left colored region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_AP014523_1 171898-172195 Orphan NA
5 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_AP014523_2 1153113-1153253 TypeV NA
1 spacers
cas14j

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_AP014523_3 1212285-1212435 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_AP014523_1 1.4|172092|18|NZ_AP014523|CRT 172092-172109 18 NZ_AP014523.1 172196-172213 0 1.0
NZ_AP014523_2 2.1|1153167|33|NZ_AP014523|CRISPRCasFinder 1153167-1153199 33 NZ_AP014523.1 1153079-1153111 0 1.0

1. spacer 1.4|172092|18|NZ_AP014523|CRT matches to position: 172196-172213, mismatch: 0, identity: 1.0

cgtatgcagaactcacag	CRISPR spacer
cgtatgcagaactcacag	Protospacer
******************

2. spacer 2.1|1153167|33|NZ_AP014523|CRISPRCasFinder matches to position: 1153079-1153111, mismatch: 0, identity: 1.0

aaggctcttttacttgtggcgctaaaggttatc	CRISPR spacer
aaggctcttttacttgtggcgctaaaggttatc	Protospacer
*********************************

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 1339 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_2 5285 : 13312 7 Hokovirus(33.33%) tRNA NA
DBSCAN-SWA_3 20089 : 21664 1 Cedratvirus(100.0%) NA NA
DBSCAN-SWA_4 24978 : 31315 6 Bacillus_thuringiensis_phage(75.0%) NA NA
DBSCAN-SWA_5 48508 : 49075 1 Pseudomonas_phage(100.0%) NA NA
DBSCAN-SWA_6 53341 : 62477 8 Tupanvirus(40.0%) tRNA NA
DBSCAN-SWA_7 66153 : 70330 4 Synechococcus_phage(50.0%) NA NA
DBSCAN-SWA_8 78328 : 85914 5 Helicobacter_phage(66.67%) NA NA
DBSCAN-SWA_9 91486 : 92443 1 Klebsiella_phage(100.0%) NA NA
DBSCAN-SWA_10 104207 : 105877 2 Leptospira_phage(50.0%) NA NA
DBSCAN-SWA_11 111926 : 113814 2 Helicobacter_phage(100.0%) transposase NA
DBSCAN-SWA_12 121522 : 125502 2 uncultured_phage(50.0%) tRNA NA
DBSCAN-SWA_13 136461 : 137436 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_14 145974 : 146721 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_15 149932 : 151240 1 Moraxella_phage(100.0%) NA NA
DBSCAN-SWA_16 160410 : 161172 1 Escherichia_phage(100.0%) tRNA NA
DBSCAN-SWA_17 168919 : 184590 6 Tupanvirus(33.33%) tRNA NA
DBSCAN-SWA_18 188222 : 193713 4 Aureococcus_anophage(33.33%) NA NA
DBSCAN-SWA_19 203219 : 204604 2 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_20 218371 : 224852 5 Halovirus(50.0%) tRNA NA
DBSCAN-SWA_21 229320 : 233393 4 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_22 241720 : 242410 1 Vibrio_phage(100.0%) NA NA
DBSCAN-SWA_23 259255 : 266312 7 Acinetobacter_phage(75.0%) NA NA
DBSCAN-SWA_24 302693 : 305953 3 Catovirus(50.0%) NA NA
DBSCAN-SWA_25 313749 : 314478 1 Moraxella_phage(100.0%) NA NA
DBSCAN-SWA_26 317760 : 323876 6 Cercopithecine_herpesvirus(33.33%) NA NA
DBSCAN-SWA_27 329430 : 330234 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_28 333456 : 338140 4 Marinomonas_phage(50.0%) NA NA
DBSCAN-SWA_29 345492 : 356233 9 Bacillus_virus(33.33%) protease NA
DBSCAN-SWA_30 369258 : 370368 1 Lactobacillus_phage(100.0%) NA NA
DBSCAN-SWA_31 373696 : 374143 1 Pneumococcus_phage(100.0%) NA NA
DBSCAN-SWA_32 381582 : 384345 1 Bodo_saltans_virus(100.0%) tRNA NA
DBSCAN-SWA_33 389431 : 390421 1 Tetraselmis_virus(100.0%) NA NA
DBSCAN-SWA_34 394428 : 396191 2 Prochlorococcus_phage(50.0%) NA NA
DBSCAN-SWA_35 402973 : 406826 9 Staphylococcus_phage(66.67%) NA NA
DBSCAN-SWA_36 413622 : 415403 2 Helicobacter_phage(100.0%) transposase NA
DBSCAN-SWA_37 418625 : 418946 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_38 427102 : 427888 1 Anomala_cuprea_entomopoxvirus(100.0%) NA NA
DBSCAN-SWA_39 431786 : 449369 17 Bacillus_phage(25.0%) tRNA NA
DBSCAN-SWA_40 455573 : 457175 1 Ostreococcus_lucimarinus_virus(100.0%) NA NA
DBSCAN-SWA_41 465916 : 470026 3 uncultured_virus(50.0%) tRNA NA
DBSCAN-SWA_42 481837 : 494381 8 uncultured_Mediterranean_phage(25.0%) NA NA
DBSCAN-SWA_43 498578 : 501022 2 Paramecium_bursaria_Chlorella_virus(50.0%) NA NA
DBSCAN-SWA_44 505044 : 508020 1 Liberibacter_phage(100.0%) NA NA
DBSCAN-SWA_45 515886 : 516984 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_46 524121 : 528235 5 Helicobacter_phage(100.0%) NA NA
DBSCAN-SWA_47 533021 : 569836 36 Helicobacter_phage(65.38%) transposase,holin,tRNA NA
DBSCAN-SWA_48 590167 : 595548 7 Dickeya_phage(20.0%) NA NA
DBSCAN-SWA_49 600492 : 601515 1 Moraxella_phage(100.0%) tRNA NA
DBSCAN-SWA_50 606391 : 607702 2 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_51 613405 : 617398 3 uncultured_virus(66.67%) NA NA
DBSCAN-SWA_52 633287 : 634565 1 Phage_21(100.0%) NA NA
DBSCAN-SWA_53 638416 : 640642 1 Agrobacterium_phage(100.0%) protease NA
DBSCAN-SWA_54 646386 : 648960 2 Hokovirus(50.0%) NA NA
DBSCAN-SWA_55 653951 : 656759 3 Acanthocystis_turfacea_Chlorella_virus(33.33%) NA NA
DBSCAN-SWA_56 694402 : 696475 1 Vibrio_phage(100.0%) NA NA
DBSCAN-SWA_57 699811 : 707923 8 Lactococcus_phage(25.0%) NA NA
DBSCAN-SWA_58 712051 : 715949 2 Synechococcus_phage(50.0%) NA NA
DBSCAN-SWA_59 719053 : 723753 4 Pandoravirus(25.0%) NA NA
DBSCAN-SWA_60 730026 : 731304 1 Catovirus(100.0%) NA NA
DBSCAN-SWA_61 735045 : 740287 3 Hokovirus(33.33%) tRNA NA
DBSCAN-SWA_62 766335 : 768671 2 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_63 777043 : 780003 4 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_64 788012 : 789257 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_65 792537 : 799182 6 uncultured_Mediterranean_phage(25.0%) tRNA NA
DBSCAN-SWA_66 810218 : 811855 2 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_67 823066 : 824932 1 Catovirus(100.0%) NA NA
DBSCAN-SWA_68 835645 : 837811 2 unidentified_phage(50.0%) NA NA
DBSCAN-SWA_69 845312 : 846470 1 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_70 850689 : 851862 1 Ralstonia_phage(100.0%) NA NA
DBSCAN-SWA_71 860452 : 868532 8 Lactobacillus_phage(25.0%) NA NA
DBSCAN-SWA_72 872864 : 883503 7 Cedratvirus(25.0%) protease NA
DBSCAN-SWA_73 897267 : 900912 3 uncultured_Mediterranean_phage(50.0%) tRNA NA
DBSCAN-SWA_74 915197 : 916415 1 Acanthocystis_turfacea_Chlorella_virus(100.0%) NA NA
DBSCAN-SWA_75 927536 : 929203 2 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_76 934211 : 935090 1 Acanthocystis_turfacea_Chlorella_virus(100.0%) NA NA
DBSCAN-SWA_77 946045 : 946666 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_78 960872 : 964048 2 Moraxella_phage(100.0%) NA NA
DBSCAN-SWA_79 970399 : 978660 6 Streptococcus_phage(33.33%) NA NA
DBSCAN-SWA_80 985058 : 989419 3 Paramecium_bursaria_Chlorella_virus(50.0%) NA NA
DBSCAN-SWA_81 996460 : 1002926 6 uncultured_virus(33.33%) NA NA
DBSCAN-SWA_82 1006167 : 1009256 4 uncultured_Mediterranean_phage(50.0%) NA NA
DBSCAN-SWA_83 1016399 : 1022106 4 Cafeteria_roenbergensis_virus(50.0%) NA NA
DBSCAN-SWA_84 1033822 : 1034707 1 Clostridioides_phage(100.0%) NA NA
DBSCAN-SWA_85 1039388 : 1048020 8 Bacillus_phage(25.0%) protease NA
DBSCAN-SWA_86 1052615 : 1053950 1 Powai_lake_megavirus(100.0%) NA NA
DBSCAN-SWA_87 1060295 : 1063451 1 Liberibacter_phage(100.0%) NA NA
DBSCAN-SWA_88 1074103 : 1076455 2 Bacillus_virus(50.0%) tRNA NA
DBSCAN-SWA_89 1080965 : 1085181 4 Erysipelothrix_phage(25.0%) NA NA
DBSCAN-SWA_90 1090122 : 1090953 1 Helicobacter_phage(100.0%) NA NA
DBSCAN-SWA_91 1101344 : 1104811 2 Aurantimonas_phage(50.0%) NA NA
DBSCAN-SWA_92 1112101 : 1114033 1 Moumouvirus(100.0%) NA NA
DBSCAN-SWA_93 1127472 : 1128129 1 Vibrio_virus(100.0%) NA NA
DBSCAN-SWA_94 1136622 : 1138404 2 Helicobacter_phage(100.0%) transposase NA
DBSCAN-SWA_95 1156854 : 1158066 1 Arthrobacter_phage(100.0%) NA NA
DBSCAN-SWA_96 1201083 : 1202415 1 Erwinia_phage(100.0%) NA NA
DBSCAN-SWA_97 1216878 : 1217742 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_98 1223520 : 1224726 2 Erythrobacter_phage(50.0%) NA NA
DBSCAN-SWA_99 1231669 : 1237710 8 Mycoplasma_phage(33.33%) protease NA
DBSCAN-SWA_100 1260415 : 1263570 2 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_101 1269922 : 1273009 1 Leptospira_phage(100.0%) NA NA
DBSCAN-SWA_102 1284119 : 1295771 9 Klosneuvirus(28.57%) tRNA NA
DBSCAN-SWA_103 1315547 : 1325988 10 Helicobacter_phage(33.33%) transposase,tRNA NA
DBSCAN-SWA_104 1333179 : 1338143 3 Mamastrovirus(100.0%) NA NA
DBSCAN-SWA_105 1343137 : 1345394 3 Salmonella_phage(33.33%) NA NA
DBSCAN-SWA_106 1361169 : 1369638 8 Clostridioides_phage(25.0%) integrase attL 1347777:1347793|attR 1370109:1370125
DBSCAN-SWA_107 1390141 : 1397719 4 Bacillus_virus(50.0%) NA NA
DBSCAN-SWA_108 1405380 : 1412199 7 Helicobacter_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_109 1436681 : 1444479 8 Hokovirus(33.33%) tRNA NA
DBSCAN-SWA_110 1450538 : 1451417 1 Acanthocystis_turfacea_Chlorella_virus(100.0%) NA NA
DBSCAN-SWA_111 1456994 : 1457876 1 uncultured_phage(100.0%) NA NA
DBSCAN-SWA_112 1463330 : 1469321 4 Bacillus_phage(33.33%) tRNA NA
DBSCAN-SWA_113 1484829 : 1490902 5 Organic_Lake_phycodnavirus(25.0%) NA NA
DBSCAN-SWA_114 1495922 : 1499492 4 Staphylococcus_phage(66.67%) NA NA
DBSCAN-SWA_115 1508880 : 1509522 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_116 1513659 : 1519159 6 Staphylococcus_phage(25.0%) NA NA
DBSCAN-SWA_117 1524553 : 1524838 1 Shigella_phage(100.0%) NA NA
DBSCAN-SWA_118 1528565 : 1529549 1 Moumouvirus(100.0%) NA NA
DBSCAN-SWA_119 1541626 : 1547343 5 Tupanvirus(40.0%) NA NA
DBSCAN-SWA_120 1551570 : 1552008 1 Bacteriophage(100.0%) NA NA
DBSCAN-SWA_121 1559642 : 1561160 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_122 1566291 : 1566651 1 Helicobacter_phage(100.0%) NA NA
DBSCAN-SWA_123 1570714 : 1572112 1 Catovirus(100.0%) tRNA NA
DBSCAN-SWA_124 1576622 : 1577390 1 Indivirus(100.0%) NA NA
DBSCAN-SWA_125 1595972 : 1599742 2 Phaeocystis_globosa_virus(50.0%) NA NA
DBSCAN-SWA_126 1626246 : 1630528 6 Vibrio_phage(33.33%) NA NA
DBSCAN-SWA_127 1636814 : 1637948 1 Yellowstone_lake_mimivirus(100.0%) NA NA
DBSCAN-SWA_128 1647518 : 1648175 1 Pseudomonas_phage(100.0%) NA NA
DBSCAN-SWA_129 1662683 : 1665743 1 Leptospira_phage(100.0%) NA NA
DBSCAN-SWA_130 1670321 : 1671407 1 Pseudoalteromonas_phage(100.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage