CRISPRimmunity

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_AP013293	Candidatus Sulcia muelleri PSPU	2 crisprs	NA	3	2	1	0

1. NZ_AP013293

CRISPR-Cas detection and classification

Crispr_ID: NZ_AP013293_1

• CRISPR_ID: NZ_AP013293_1
• CRISPR_location: 157558-157627
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_AP013293_1

Consensus_repeat	Method
AATATTATTATTTTAAAAAAAAA	CRISPRCasFinder

spacers of NZ_AP013293_1

>1.1|157581|24|NZ_AP013293|CRISPRCasFinder
AAAAATTTATTATTATTGTATTGT

CRISPR arrays and Neighbor proteins around NZ_AP013293_1

CRISPR arrays

The CRISPR arrays of NZ_AP013293_1

>merge|NZ_AP013293|1|157558-157627|CRISPRCasFinder
TAAAATATTATTATTTTAAAAAAAAAAATTTATTATTATTGTATTGTAATAATAATATTTTTATTTTAAA

>NZ_AP013293|1|1|157558-157627|CRISPRCasFinder
TAAAATATTATTATTTTAAAAAA	AAAAATTTATTATTATTGTATTGT
AATAATAATATTTTTATTTTAAA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP013293.1|WP_041093871.1|150715_151300_+|transaldolase	unknown	unknown	gnl|CDD|234947
NZ_AP013293.1|WP_041093882.1|157636_159499_+|molecular-chaperone-HtpG	unknown	unknown	gnl|CDD|235366
NZ_AP013293.1|WP_041093892.1|164644_166138_+|glycine--tRNA-ligase	unknown	unknown	gnl|CDD|235240
NZ_AP013293.1|WP_041093873.1|151305_152775_-|proline--tRNA-ligase	unknown	unknown	gnl|CDD|236327
NZ_AP013293.1|WP_041093875.1|152824_155176_+|endopeptidase-La	unknown	unknown	gnl|CDD|223542
NZ_AP013293.1|WP_041093869.1|149373_150684_+|tRNA-lysidine(34)-synthetase-TilS	unknown	unknown	gnl|CDD|238950
NZ_AP013293.1|WP_171815084.1|169516_171973_-|bifunctional-aspartate-kinase/homoserine-dehydrogenase-I	unknown	unknown	gnl|CDD|181856
NZ_AP013293.1|WP_041093899.1|168582_169515_-|homoserine-kinase	unknown	unknown	gnl|CDD|234920
NZ_AP013293.1|WP_041093890.1|164293_164641_+|4Fe-4S-dicluster-domain-containing-protein	unknown	unknown	gnl|CDD|235637
NZ_AP013293.1|WP_041093884.1|159503_160808_-|tRNA-(N(6)-L-threonylcarbamoyladenosine(37)-C(2))--methylthiotransferase-MtaB	unknown	unknown	gnl|CDD|223694
NZ_AP013293.1|WP_041093860.1|142589_145796_+|carbamoyl-phosphate-synthase-(glutamine-hydrolyzing)-large-subunit	unknown	unknown	gnl|CDD|273581
NZ_AP013293.1|WP_041093886.1|160804_163897_-|hypothetical-protein	unknown	unknown	gnl|CDD|237256
NZ_AP013293.1|WP_041093897.1|167258_168566_-|threonine-synthase	unknown	unknown	gnl|CDD|236418
NZ_AP013293.1|WP_041093895.1|166265_167165_+|1,4-dihydroxy-2-naphthoate-octaprenyltransferase	unknown	unknown	gnl|CDD|260125
NZ_AP013293.1|WP_041093867.1|147506_148580_+|M20-family-metallo-hydrolase	unknown	unknown	gnl|CDD|349902
NZ_AP013293.1|WP_041093865.1|146742_147516_+|acetylglutamate-kinase	unknown	unknown	gnl|CDD|239771
NZ_AP013293.1|WP_075050671.1|148862_149372_+|shikimate-kinase	unknown	unknown	gnl|CDD|238260
NZ_AP013293.1|WP_041093863.1|145804_146746_+|acetylornithine-carbamoyltransferase	unknown	unknown	gnl|CDD|235304
NZ_AP013293.1|WP_041093888.1|163948_164284_+|50S-ribosomal-protein-L19	unknown	unknown	gnl|CDD|235418
NZ_AP013293.1|WP_041093878.1|155168_156380_+|diaminopimelate-decarboxylase	unknown	unknown	gnl|CDD|143501

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_AP013293.1|WP_041093871.1|150715_151300_+|transaldolase	gnl|CDD|234947	PRK01362, PRK01362, fructose-6-phosphate aldolase.	3.83167e-83
NZ_AP013293.1|WP_041093882.1|157636_159499_+|molecular-chaperone-HtpG	gnl|CDD|235366	PRK05218, PRK05218, heat shock protein 90; Provisional.	0
NZ_AP013293.1|WP_041093892.1|164644_166138_+|glycine--tRNA-ligase	gnl|CDD|235240	PRK04173, PRK04173, glycyl-tRNA synthetase; Provisional.	0
NZ_AP013293.1|WP_041093873.1|151305_152775_-|proline--tRNA-ligase	gnl|CDD|236327	PRK08661, PRK08661, prolyl-tRNA synthetase; Provisional.	0
NZ_AP013293.1|WP_041093875.1|152824_155176_+|endopeptidase-La	gnl|CDD|223542	COG0466, Lon, ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones].	0
NZ_AP013293.1|WP_041093869.1|149373_150684_+|tRNA-lysidine(34)-synthetase-TilS	gnl|CDD|238950	cd01992, PP-ATPase, N-terminal domain of predicted ATPase of the PP-loop faimly implicated in cell cycle control [Cell division and chromosome partitioning]. This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This domain has a strongly conserved motif SGGXD at the N terminus.	1.25641e-60
NZ_AP013293.1|WP_171815084.1|169516_171973_-|bifunctional-aspartate-kinase/homoserine-dehydrogenase-I	gnl|CDD|181856	PRK09436, thrA, bifunctional aspartokinase I/homoserine dehydrogenase I; Provisional.	0
NZ_AP013293.1|WP_041093899.1|168582_169515_-|homoserine-kinase	gnl|CDD|234920	PRK01212, PRK01212, homoserine kinase; Provisional.	5.29434e-111
NZ_AP013293.1|WP_041093890.1|164293_164641_+|4Fe-4S-dicluster-domain-containing-protein	gnl|CDD|235637	PRK05888, PRK05888, NADH-quinone oxidoreductase subunit NuoI.	0.000379083
NZ_AP013293.1|WP_041093884.1|159503_160808_-|tRNA-(N(6)-L-threonylcarbamoyladenosine(37)-C(2))--methylthiotransferase-MtaB	gnl|CDD|223694	COG0621, MiaB, 2-methylthioadenine synthetase [Translation, ribosomal structure and biogenesis].	1.43157e-128
NZ_AP013293.1|WP_041093860.1|142589_145796_+|carbamoyl-phosphate-synthase-(glutamine-hydrolyzing)-large-subunit	gnl|CDD|273581	TIGR01369, Carbamoyl-phosphate_synthase_large_chain, carbamoyl-phosphate synthase, large subunit. Carbamoyl-phosphate synthase (CPSase) catalyzes the first committed step in pyrimidine, arginine, and urea biosynthesis. In general, it is a glutamine-dependent enzyme, EC 6.3.5.5, termed CPSase II in eukaryotes. An exception is the mammalian mitochondrial urea-cycle form, CPSase I, in which the glutamine amidotransferase domain active site Cys on the small subunit has been lost, and the enzyme is ammonia-dependent. In both CPSase I and the closely related, glutamine-dependent CPSase III (allosterically activated by acetyl-glutamate) demonstrated in some other vertebrates, the small and large chain regions are fused in a single polypeptide chain. This model represents the large chain of glutamine-hydrolysing carbamoyl-phosphate synthases, or the corresponding regions of larger, multifunctional proteins, as found in all domains of life, and CPSase I forms are considered exceptions within the family. In several thermophilic species (Methanobacterium thermoautotrophicum, Methanococcus jannaschii, Aquifex aeolicus), the large subunit appears split, at different points, into two separate genes. [Purines, pyrimidines, nucleosides, and nucleotides, Pyrimidine ribonucleotide biosynthesis].	0
NZ_AP013293.1|WP_041093886.1|160804_163897_-|hypothetical-protein	gnl|CDD|237256	PRK12901, secA, preprotein translocase subunit SecA; Reviewed.	0
NZ_AP013293.1|WP_041093897.1|167258_168566_-|threonine-synthase	gnl|CDD|236418	PRK09225, PRK09225, threonine synthase; Validated.	4.78207e-166
NZ_AP013293.1|WP_041093895.1|166265_167165_+|1,4-dihydroxy-2-naphthoate-octaprenyltransferase	gnl|CDD|260125	cd13962, PT_UbiA_UBIAD1, 1,4-Dihydroxy-2-naphthoate octaprenyltransferase. Human UBIAD1 is an enzyme involved in the synthesis of MK-4. Menaquinones (MKs, also called bacterial forms) are one of the two forms of natural vitamin K, the other being the plant form, phylloquinone (PK). All forms of vitamin K have a 2-methyl-1,4-naphthoquinone (menadione; K3) ring structure in common. At the 3-position of the ring, PK has a phytyl side chain while MKs have several repeating prenyl units. Prenyltransferases (PTs) catalyze the regioselective transfer of prenyl moieties onto a wide variety of substrates and play an important role in many biosynthetic pathways.	3.2599e-74
NZ_AP013293.1|WP_041093867.1|147506_148580_+|M20-family-metallo-hydrolase	gnl|CDD|349902	cd05651, M20_ArgE_DapE-like, M20 peptidases with similarity to acetylornithine deacetylases and succinyl-diaminopimelate desuccinylases. Peptidase M20 family, uncharacterized protein subfamily with similarity to acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase (ArgE/DapE) subfamily. ArgE/DapE enzymes catalyze analogous reactions and share a common activator, the metal ion (usually Co2+ or Zn2+). ArgE catalyzes a broad range of substrates, including N-acetylornithine, alpha-N-acetylmethionine and alpha-N-formylmethionine, while DapE catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelate (L,L-SDAP) to L,L-diaminopimelate and succinate. Proteins in this subfamily are bacterial, and have been inferred by homology as being related to both ArgE and DapE.	0
NZ_AP013293.1|WP_041093865.1|146742_147516_+|acetylglutamate-kinase	gnl|CDD|239771	cd04238, AAK_NAGK-like, AAK_NAGK-like: N-Acetyl-L-glutamate kinase (NAGK)-like . Included in this CD are the Escherichia coli and Pseudomonas aeruginosa type NAGKs which catalyze the phosphorylation of N-acetyl-L-glutamate (NAG) by ATP in the second step of arginine biosynthesis found in bacteria and photosynthetic organisms using either the acetylated, noncyclic (NC), or non-acetylated, cyclic (C) route of ornithine biosynthesis. Also included in this CD is a distinct group of uncharacterized (UC) bacterial and archeal NAGKs. Members of this CD belong to the Amino Acid Kinase Superfamily (AAK).	3.97481e-64
NZ_AP013293.1|WP_075050671.1|148862_149372_+|shikimate-kinase	gnl|CDD|238260	cd00464, SK, Shikimate kinase (SK) is the fifth enzyme in the shikimate pathway, a seven-step biosynthetic pathway which converts erythrose-4-phosphate to chorismic acid, found in bacteria, fungi and plants. Chorismic acid is a important intermediate in the synthesis of aromatic compounds, such as aromatic amino acids, p-aminobenzoic acid, folate and ubiquinone. Shikimate kinase catalyses the phosphorylation of the 3-hydroxyl group of shikimic acid using ATP.	1.0316e-41
NZ_AP013293.1|WP_041093863.1|145804_146746_+|acetylornithine-carbamoyltransferase	gnl|CDD|235304	PRK04523, PRK04523, N-acetylornithine carbamoyltransferase; Reviewed.	3.07159e-95
NZ_AP013293.1|WP_041093888.1|163948_164284_+|50S-ribosomal-protein-L19	gnl|CDD|235418	PRK05338, rplS, 50S ribosomal protein L19; Provisional.	1.75015e-37
NZ_AP013293.1|WP_041093878.1|155168_156380_+|diaminopimelate-decarboxylase	gnl|CDD|143501	cd06828, PLPDE_III_DapDC, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Diaminopimelate Decarboxylase. Diaminopimelate decarboxylase (DapDC, EC 4.1.1.20) participates in the last step of lysine biosynthesis. It converts meso-2,6-diaminoheptanedioate to L-lysine. It is a fold type III PLP-dependent enzyme that contains an N-terminal PLP-binding TIM-barrel domain and a C-terminal beta-sandwich domain, similar to bacterial alanine racemases. DapDC exists as homodimers with active sites that lie at the interface between the TIM barrel domain of one subunit and the beta-sandwich domain of the other subunit. Homodimer formation and the presence of the PLP cofactor are required for catalytic activity.	1.9344e-158

Protein sequences

>NZ_AP013293.1|WP_041093878.1|155168_156380_+|diaminopimelate-decarboxylase
MNKNIYLHNITKKYGTPLYVYDANKIEYQYKLIKKSFSYIENLKINYACKANTNISILKFLKKLGSGLDTVSIQEIEIGLKAGFKPKEIIYTPNSVSLSEIKKAIKAGVIINIDNLSLLEQIGNDNTNYPIGIRINPHILGGGNKKISVGHIDSKFGISYYQLPHIKKIVENTGIKVEGIHMHTGSDILDIGVFLQGADILLNVASFFNELKYIDFGSGFKVPYKKNDTKTDIDMLGVSLKRKFLFFCEKYCKKLKLFFEPGKFLVSESGSFIVKVNVIKHTTSTVFAGVDSGFNHFIRPMFYDSYHHIDNISNPSGIFRFYTVVGYICESDTFCVNRKINEIREGDLLCFRNAGAYCFSMSSNYNSRYRPSEVIIYHKKYFLIRKRENMQDLLNNMIDIELS
>NZ_AP013293.1|WP_041093875.1|152824_155176_+|endopeptidase-La
MLLHNIFIDSESVHILITEYLYILPVRNVVLFPGVVIPITAGRKKSIKLLKDAYSTDKIIGVLTQKYFNTENPKEQELYYIGTVAKILKLLKMPDGNTTVILQGKSRFKVIKMIQYYPYLTAEIIYLKDKKPGKQDKEYIALISSIKEIALKIIQDNTNIPSESSFAIRNIESKSFIINFVASNINLKIKKKQILLEYDFFKQRAIETFRFLNIEYKQIKLKNDIKYRVKTEMDQQQKEYFLNQQIKAIQEELGDFSYEKEVYELRIQSYKKKWSKKVQKQFDRELNKFQRTNTQMPEYTILRNYLDFMLDLPWKKYSQDNFDLNRAKKILDKDHFGIEKVKERIIEYLSVIKLKQDLRSPILCFYGPPGVGKTSLGKSIAYALNRKYIRMSLGGLNDEAEIRGHRKTYIGAMPGRILQSIKKAGTSNPVFVLDEIDKMGIGHQGNPSSAMLEVLDPEQNKEFYDNFLEIGYDLSKIIFIATANSLYPIHIAILDRMEIIDMNGYTVEEKIEICKKHLIPKQLKENGLKNNDLILGVKQIEKIIESYTRESGVRSLEKRISKIVRDAAKNIAMNKKYLKRINFSKIEEVLGPPNDPEKYEFTKIPGVVTGLAWTLVGGEILYIESTLFKGKGYFSITGNVGEVMKESATIALKYIKAHNYEFGIDDKMFELYNIHINVPEGGIPKDGPSAGITMLTSMISSFWKTSIRPYLAMTGEITLRGKVLPVGGIKEKILAAKRANIKEIILSKDNKKDVYDIKKVYLKGLKFHFVSKINEVINLSFYE
>NZ_AP013293.1|WP_041093873.1|151305_152775_-|proline--tRNA-ligase
MKKLTKRNENYSKWYNEIILRANIAEKSDVRGCMIIKPYGFYIWEKIKSILDNILKYTGHENVYFPLLIPKSYFSKEYNHIKGFAKECAIISHYRLKNYKNKNIIVDKSSKLEDELIVRPTSETIIWNSYKRWINSYRDLPILFNQWANIIRWERRTRLFLRTSEFLWQEGHTAHSTKKEAINQAKKILNIYTNVLENFMAIPVIQGIKTDSEKFAGAEKTYCIESIMQDGKSLQIATSHFLGQNFSKAFDVRYSTEKGNKEYVWATSWGISTRLIGAIIMTHSDDNGLILPPKIAPIQIVIIPVYKTQEQLNLIEKLVFPLKKFLEKIGINIKYDKRIYYTPGWKFNEYEIKGIPIRITIGKKDIDRGTVEVVRRDTLEKKYISINKLKFLIPKILSKIQDNILKVALKRKNNFLIEVDSYEEFIEKIKKNSGFLFAHWDGSSETETKIKVETNATIRCIPINLKKNMGKCIFSKNLSKQRVLFAKSY
>NZ_AP013293.1|WP_041093871.1|150715_151300_+|transaldolase
MYYFINTANLAKIKEAENLGILDGVNTNTSLIVKEGIIKKNDRYSHYKNICNIISGDLNADVISTDYNDIIKEGEFLSNLDKKIIVKVPLTRDGIKAIKYFSIKKIKTNCTLVFSTGQALLAAKAGANYISIFIGRLYNTNIIKEIKLIYDNYFFKTKILVTSIINTFHIISCAKIGIDIITAPLNEIKLLLNN
>NZ_AP013293.1|WP_041093869.1|149373_150684_+|tRNA-lysidine(34)-synthetase-TilS
MFYKTYFIKYIKKKFNLKNKKIYVSVSSGLDSMVLLDVLMKICNIPICVIHCNFKLRGNDSDKDELFIQEFCLKNNIFFKSKKFNTINSNSHFSIQMMARKFRYDWFKYLLNNSYCDYIALGHNLDDSIETFFINIIRGTGIKGLIGIKNFNKKIIRPLYFFLKKEIISYANENNIKWREDISNYDHKYLRNRIRFFLKPILDYKFYNGFKKSIKYLYDEYVCSKKHISYLYKIITIEKKIYPFLVKIDIKKLLKLYPLSTYLFKIFYKYGFNNTKNLKKILNSKSGKKIFSKKYCLIKERTTLLLVENNINFIKKNYYIHNIDTIKIPFFIYFFLSERKKKKSYTSLDFDKLIFPLKLRNCKKGDRLNKIGMKGNKKLSKYFKEKKISIVDKTNIWVLINGDKKIICIIYERFECLDKNFKITNFTKKVLNLKKQ
>NZ_AP013293.1|WP_075050671.1|148862_149372_+|shikimate-kinase
MKIILIGYMGSGKTTIGKKLANNLNNKFYDLDKKIIEYTKKSIYELFEIYGENKFRKLEYFILKKFLKKKKSYILSVGGGTPCYNNNIFLMKKYSKIFYLNAEINTLFTRLLKQKKNRPLISKLDKNDLYNFICDSLSKRLFFYKKADFTINIKTKSLLEIVKEIINII
>NZ_AP013293.1|WP_041093867.1|147506_148580_+|M20-family-metallo-hydrolase
MSVINLQKLKKECIKLLKKLINTPSLSKEEKKTADIIESFFKKYKLNTKRKYNNIWIENNNYDYDNYTILLNSHHDTIKPSNGWYTDPFVVKEDGDKIIGLGSNDAGGSVVSLIATFIYINSLPKYKYKLILIISAEEEIRATRGVESILCDLGKINLGIIGEPTNMQMAIAEKGLIVLDCLSIGKTGHAARYEGINALYIAINDIIWLKNYVFEKKSDLLGKIKLTVTKIQCGIQRNVIPDTCYFTVDIRTNEIYSHEEIINKIKKNIKSKIISSSYRLKSSYIDEKNKIVKISKNMNIKIFGSPTLSDQSVMNFPTVKIGVGDSSRSHTPNEYILISEIEDGIDLYIKILLNFIK
>NZ_AP013293.1|WP_041093865.1|146742_147516_+|acetylglutamate-kinase
MINVVKIGGEIIDNKNLLIYSLKNFSKLDGYKILVHGGGKIADIFSKKMGYNNNIINGRRITDKTTLDIVVMTYSGLINKRIVSKLQSLGLNSLGFSGADGNIVKSYKRPIKDIDYGYVGNLKINSINTDLIKYMFKIGIIPVLSPITHDGNGNLLNTNADTIASYLSISLSKEYKVILSYIFNKIGVLNNLNDEKSYYSNIEENLFKKLKNNNIINKGMIPKLENAFYALKNGVYKVTISHPNYLNNTTKKTIICL
>NZ_AP013293.1|WP_041093863.1|145804_146746_+|acetylornithine-carbamoyltransferase
MKKFISVNDVKDVKQLIDKAIKLKKNTFKKKKICKTIGLVFFNTSLRTRLSSQKAAFNIGCNTWILNIDSDSWKIEKSDGSVMNSTQEHIKEAIGVMSLYCDILAVRTFPCLIDREYDYEEILLKKIIKYSKVPVVNLESATLHPLQSLADLMTIEEFKKKKKIKIVLSWAPHIKALPQSVPNSFIEWVKKIKDIKLYITNPYGYNLNSHFTNGIKLINNQNEAFKNADFIYAKNWSSYDNYGKIICKDLSWTITKKKMKLTNEAKFMHCLPVRRNLVVEDAVLDDKNSIVLNQAENRIFATQTVFLEILENI
>NZ_AP013293.1|WP_041093860.1|142589_145796_+|carbamoyl-phosphate-synthase-(glutamine-hydrolyzing)-large-subunit
MKLEKVLVIGSGALKIGEAGEFDYSGTQALKALKEENIFTILVNPNIATVQTSEKIADKIYSLPITPFFVEKIIEKEKPQGIFLSFGGQTALNCGIELYNNGVFKKNNVKVLGTPISYIIKSEDRDIFRKMLINIGINIAKSIAVNSVYEAINASNEIGFPLIIRSAYALGGLGSGFAKNVDELKKISSVALSYSSQILIEESLKGWKEIEYEVVRDIYDNCITVCNMENIDPIGIHTGDSIVVAPSQTLNNIEYNRLRSISIKIARYFNIIGECNVQFALSNNSDKYNVIEINARLSRSSALASKATGYPLAFIAAKLALGYGLHELKNTVTKLTYAFFEPALDYIVCKIPRWDLKKFDGVSTKIGSSMKSVGELMSIGGSFEEAIQKGLRMLDLGLYGFINPLKKKKKIKSVIKILKSPKYNRIEVLEDAFEKGLSVYDITNITNINPWFIYKLENIYKTKKKLKFYNKKNYITYDLLYKSKKQGFSDNQIAGLISSSIDEITKLSNNIRNYRKKKKIIPFTRQIDTLASEYPSKTNYLYLTYNGEHHDVSYSEKEKSIVILGSGVYRIGSSVEFDWCCVSGLDFIKKEGYRSVIINYNPETVSTDFDVCDRLYFEELSLERVLDIIELENPEGTVISMGGQIPNNLSLPLYKKKVKILGTSPIHIDEVEDRFKFSKSLDKLNILQPKWKELSNIYDVYHFINLVGFPIIIRPSYVLSGAAMNIVFDKKKLDFCLKKAKTISPKYPIVITKFIENAKEIELDAVANNGKMIYHAISEHIEYAGVHSGDATLVYPTQNISLNTIKKIKNISKKIAKRFNISGPFNIQFLYKKKKIKVIECNLRASRSFPFISKVSHLNMVELAMKVLLKKKNIDKNITNFLTIDYVGVKSSQFSFSRLEGSDPILGVDMVSTGEVGCLGSSFNEALIKSMLSVGYNIPKKNIFIYIKSLKNRIIMLDYIKLLIINNYILFSKDETYNFFIKNKIFCKKNSSTKKSSNIIDNLKSNKIDLIINIPYKNNKNDYLIRRAAINLNIPLLTNICLAKVFIKSFCEIKSFKKIYISHWNSYK
>NZ_AP013293.1|WP_041093882.1|157636_159499_+|molecular-chaperone-HtpG
MEKGKIKVTAEDIFPVIKKFLYSDHEIFIRELVSNATDAILKLKTLISLGKVNKKINNLIIEIILNKENKILKIIDNGIGMTKKEVYKYINKIAFSGAEAFLKKYKNKKSLIGNFGLGFYSSFMVSDKVEIISKSYKDSESAIHWICDGSTNFSIKNIDTPTKSGTEIILHINDSSKEFLEENRIKELLIKYCKFMPIPIKIGEREEIKKNKNGLEKKIKVNNIINNTSPIWIKNPINGKDEEYINFYKELYPMQIENPLFWIHLNIDHPFKLTGVLFFPKIRNQIEIQRDKIQLYQNQVYVTDNLEGIVPDFLNFLKGVIDSPDIPLNVSRSYLQSDSSVKKISGYITRKVADKLENMCKNNREDFEKKWEDIKIIIEYGMISDPNFYSKAKKFALYPDINKKYFILEEYIEHIKNTNKLKNNKIICFYTSNLENQNYYIQTIKNKGYKILLLDSPLVGHLLQKIEMDYKNLNFYRVDSDKINKILKNEKKNISNLSENEIIFLKKILNQNIDKEKFLIKIEDLDDSSLPFIITIPEFIRRMKEISMTGNNMFNIQNFNSKYNIIVNKNHKFIKKIINEKDLNIQKKIIKNSLNLIMLSQNLLKGKELTDFMYQSFENF
>NZ_AP013293.1|WP_041093884.1|159503_160808_-|tRNA-(N(6)-L-threonylcarbamoyladenosine(37)-C(2))--methylthiotransferase-MtaB
MKKNKVAFYTLGCKLNFAETDTIINKFLKKGYEYVKFRSFADIYIINTCSVTKNADKELKKLVRIAIKNNVNGFIVAIGCYSQVNPKEISLINGIDLIIGSKEKFNIINYLKNFSKKKNANIYSCSLKEYNMFIPSYSKLNRTRSFLKIQDGCDYKCSYCTIPKARGLSRSDNIKNIIKYAKNIIKQGIKEIVLTGVNIGDFGKIYNKKNKSNFLELIQAMEYYLNDIKRIRISSIEPNLLSDDIINFISKSKIFVNHFHIPLQSGSDEILNKMKRRYSKKIYLERIKKIFNIMPSACIGTDVIVGFPGEKEENFLETYSLLSELDISYLHVFPFSERKNTEAFFMKDSIPQEIRYKRSKILRKLSKKKKYNFYIKHINKKKNVLFENKKKSGFIYGYTDNYIRTKTNWKSELVNKIKNVTLLNVDNCGIMICK
>NZ_AP013293.1|WP_041093886.1|160804_163897_-|hypothetical-protein
MNSFNKLIEFFFLKKNKKDMKNLIFFLKNIKFFEKKINFYSNDELRNQTLIFKSKIKEKTKFFYKEIDNLQKKLSYKKDQYLSIEEINEKGFFLKKIYKIKKKIYKEEEKILVELLPEAFAVVKETAKRFKENKEIIVNSNKLDYLLIKSRSYLKIEGGKTIWKNKWSSMGKPVIWNMIHYDVQLMGGVVLHQGKIAEMYTGEGKTLVATLPIYLNALTGKGVHVVTVNEYLAKRDSEWMAPLMEFHGLTVDCIDIYKNNSYFRRKAYEADVTYGTNNEFVFDYLRDNMVNSFKKLIQKKLNYAIIDEVDSVLIDEARTPFIISGPVNDQNFNYFYIFKYIVEKIFNKQLLFLNKIFNLARKLINSGNKKEGGLNLFKVYRGLPKYKPLIKFLGEKKIRKILENTEYYYMQDNNKNMFIVDSDLYFVINEKNNTVELSEKGMNFISNEINDTNFFRLPDIQKQFIYIEMENISIEEKNFLKRKKLINFYKKSDKIHTVNQLMKAYTLFEKNIHYLVIDNKVKIVDEQTGRIIEEKRYSDGLHQALEAKENVNIENYSQPLATITLQNYFRMYKKLSGMTGTASTEEEEFFKIYNLDVVIIPTNKPVIRKNYEDFIFKTKKEKYNAIINKVIFLSKNEKRPVLVGTTSVEVSELISRSLNISKIYNNVLNAKYYKKEADIIEAAGLSGIVTIATNMAGRGTDIKISDEVKKLGGLAIIGTEKHYSRRIDRQLIGRSGRQGDPGSSQFYLSLEDDLMRIFGLDRISKLLDKLGHKKGEYITGPLISNSIELAQKKIEANNFSIRKRLLEYDDVINEQRKFLYKFRKNALDINISSIFISHMIYNLIDQIISDSKNDFKVFENELLKIFNFNIIKKKFYYSYNKEDFKKKIYYDIINYYNFIKHKIIKKIKYIRSFIKFSCNPNFINLKIKNFIIKLSLKEKNYYKVINKLEKKIIIYFIDEKCKHHLKYMENLIKFSQYSVYEQKKPILVFKYKAFEKFNKLLKNINKSSIQFLFNCKINDYFFIKKKLTFK
>NZ_AP013293.1|WP_041093888.1|163948_164284_+|50S-ribosomal-protein-L19
MNNIINYVYNKYIKTKKKLDILKLNSGDNITVHYEIIEGEKNRIQLFKGIIIKIKGYTFTVRKISGEIGVEKIFNIHQTSIKKIYINQKGKVRRSKIYYFRKLKGKKAKIK
>NZ_AP013293.1|WP_041093890.1|164293_164641_+|4Fe-4S-dicluster-domain-containing-protein
MSLKITEECINCGACEPECPNNAIYEGSKEWTISDGTKIKGFIINKLGIKIDVNFLQKPKKYDYYFIVYEKCTECLGFYDEPQCASVCPVDCCILDESNIESKEELLKKKKILHT
>NZ_AP013293.1|WP_041093892.1|164644_166138_+|glycine--tRNA-ligase
MEKNYKKLKFIISHAKYYGFIFPSSEIYDGLKAVYDYGQYGILLKNNIKEYWWKSMTQLHENIVGIESSILMHNKIWKASGHIDEFNDILLYNENTKKNYRIDLLIEDFLEKINNYKNILFYNKKIIYNINYIKKKFKKKLFYYIYECFNKNKILDIKSLINKLNIYEPNSGYKIYKINLMFIVYLKNLDNNKKLYLRPETAQGSFINFLNVKKTSKINIPFGISQIGKVFRNEIIARQFLFRMREFEQMEMQFFFCPGEEEKWYYYWKEYRLKWHLSLGIKKDNYRFYNHDKLAHYSKDACDIQFKFPFGFKELEGIHSRTDFDMKNHEKFSKKKLRYFDFKKNRSYIPYIIETSIGLDRMFLAIFSSCLKEEKIKNDINHKRIVFKIPYILSPIKVAILPLVKKNELTFIGKKIFKKFKLYYSLVYDEKDSIGKRYRRQDSIGTPICITIDYDSLNDNCVTIRYRDSMNQKRIPILKIKKNIEKSINIKNILNYI
>NZ_AP013293.1|WP_041093895.1|166265_167165_+|1,4-dihydroxy-2-naphthoate-octaprenyltransferase
MLEFYNWIYAFRLNTLPLSLSGIILSSFISYSEKGIFNVHIFIWSSLTSIFLQILSNIANDYGDGIKGTDNIYRIGPKRTIQSCMISKKKIRIALIIFSVLSFISNIILLFDYFKKKNYYIIIVILICILSAIKYTIGYHPYGYKGLGDLSVLIFFGFISLEGNYYLYNNHLNIKLLLLCFSLGFLTVSVLNINNMRDIDNDKKNKKYTIPVRIGLKKSKIYHILLMIVPFILSIIFVIITYKSIYQYIFIILILPTIIHLNKIYKISNNKDFNNELKTAVYINILYALLMGIGFILKK
>NZ_AP013293.1|WP_041093897.1|167258_168566_-|threonine-synthase
MLYKSLKNYKYKVSFKEAVLTGQSPEKGLYFPENIPLLEKKIIKNISNYDVNDLILEVIQPFIGNEIPYKELLNIISNTLNFKININNIYNNIFSLELFLGPTLAFKDIGVKFLSGCIKYFRKNLNKNIIILTATSGDTGAAVAHAFHKIDGVKVVILYPSSKISILQEKQITTLGDNILALEIKGNFDDCQILVKQAFYDEQIREKLFLTSANSINIARLLSQIFYYFMCYKLLHSNNKLVFSIPSGNYGNICAGLIAFKMGLPIKHFIAATNINDTIPRLLKTGIYNPYPSQETISNAMDISDPSNFSRIMYMFKTINNLKTIVSAYSFTDKETIDIIKYIWNNYKYMMDPHGAIGFLGLIKLIKNYKNNYFNNIFLSTAAPVKFLDKITEDLSDKIFLDKKVIKLIKKNKKSIHLSNKYEIFKNWLLSNNFL
>NZ_AP013293.1|WP_041093899.1|168582_169515_-|homoserine-kinase
MKIIKVIAPATIANIVCGFDVLGLAVNIPNDEIIIKITNIPGIKIKKIFGAKLSKNKNKNVISIALQALLNKYKKSNIGFDIEIYKKIKPGSGIGSSAASAAGIVVGANYLLGNPFNKIELIQFAMEGERLAGGVPHADNVAPAIIGGITLIRSYKPLDIISLRSPDNIWISILHPEIEIKTSDARKILKHKILMNDAIKQWGNLGALIAGLYKEDYDIISRSLEDVIIEPIRAILIPAFNELKINCKSIGALGGGISGSGPSVFMLSNGKKKAELVTNVMKKIYSKLELKYKIYTSSINKTGIVYYELI
>NZ_AP013293.1|WP_171815084.1|169516_171973_-|bifunctional-aspartate-kinase/homoserine-dehydrogenase-I
MANAIKVLKFGSSSLIDSVSLKKICNILKKNKNNVKYAIIISALYNITNILIKCGKLASKKNNDYKHILELIEYKHIIIIYELFTITKKSYIISNLKKNLNVLENFCNGIFQVEELSKYSLYNIMNFGVINLSYLIAEKIKEFNLKVKLKDSRELILTDYEFECANIDFKKSNYKIIDFFKKEKSKFIILPGFIAFSSEVKTSTLGGADYIACIIASALKANLLEIWTNVNGIMTADPKLVSQAYTLKKISYEEAMELSHFCAKIIYSPTLQPVIENQIPLKIKSIFLEKKKGTSLKNRNFIKKKTITGISVMKQISLITLEGSVMVGIPGYSKRLFKTLSEKKINVVLITQSSSEHSIAVGIHDKDVLKAKIVIDNEFYREIYNKSIKPLSIEKDLCIIAIVGDNMKNMHGTSGKIFSAMGKNSINIRAISQGSTEKNISVVIKNTDLKKAINILHEKFFEKQNKQINLFIIGLGKVGSNLLYQINKQKKYLNKEFKIKLRVIGLANSKKMIFKKDGIFIKKYQYYIENMSYDMDLNKFMEIMSEINLRNSIFVDNTANSNIAMIYENILKKGIGVITCNKIACSSNYKYYKKLKELSRNLNFPFYFETNVGASLPVISTLNDLINSGDKIYKIEAVLSGSLNFIFNKFVYNKTFFKVVIEAQNYGYTEPDPRIDLSGIDVMRKILILARECGSNLELENIYKTNFLPEECLTSTSIDNFYNLLEKYNNFFYEIRKKTVRTGQKLRFIAKYKNGNAYVRLKSIGVDHPFFNLEGKDNMVLYNTHRYSEQPLIIKGAGAGAEVTASGVLSDIIKASKF

Crispr_ID: NZ_AP013293_2

• CRISPR_ID: NZ_AP013293_2
• CRISPR_location: 199609-199974
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 5 spacers

Consensus repeat of NZ_AP013293_2

Consensus_repeat	Method
AACGGAAGTAGCGAAATATAAACCGGAAACGNAAGT	CRT

spacers of NZ_AP013293_2

>2.1|199645|42|NZ_AP013293|CRT
AGCAAAACCTAAAAGATCTTATAAAAGAAAACTTAAACCTGA
>2.2|199723|42|NZ_AP013293|CRT
AGCAAAACCTAAAAGATCTTATAAAAGAAAACTTAAACCTGA
>2.3|199801|18|NZ_AP013293|CRT
AGCAAAATATAAACCGGA
>2.4|199855|30|NZ_AP013293|CRT
AGCAAAACCTAAAAAAGATTATAAACCGGA
>2.5|199921|18|NZ_AP013293|CRT
AGCAAAATATAAACCGGA

CRISPR arrays and Neighbor proteins around NZ_AP013293_2

CRISPR arrays

The CRISPR arrays of NZ_AP013293_2

>merge|NZ_AP013293|2|199609-199974|CRT
AACGGAAGTAGCGAAATATAAACCGGAAACGGAAGTAGCAAAACCTAAAAGATCTTATAAAAGAAAACTTAAACCTGAAACGGAAGTAGCGAAATATAAACCGGAAACGGAAGTAGCAAAACCTAAAAGATCTTATAAAAGAAAACTTAAACCTGAAACGGAAGTAGCGAAATATAAACCGGAAACGAAAGTAGCAAAATATAAACCGGAAACGGAAGTAGCGAAATATAAACCGGAAACGGAAGTAGCAAAACCTAAAAAAGATTATAAACCGGAAACGGAAGTAGCGAAATATAAACCGGAAACGAAAGTAGCAAAATATAAACCGGAAACGGAAGTAGCGAAACCTAAAAAATATTCTATAAA

>NZ_AP013293|2|1|199609-199974|CRT
AACGGAAGTAGCGAAATATAAACCGGAAACGGAAGT	AGCAAAACCTAAAAGATCTTATAAAAGAAAACTTAAACCTGA
AACGGAAGTAGCGAAATATAAACCGGAAACGGAAGT	AGCAAAACCTAAAAGATCTTATAAAAGAAAACTTAAACCTGA
AACGGAAGTAGCGAAATATAAACCGGAAACGAAAGT	AGCAAAATATAAACCGGA
AACGGAAGTAGCGAAATATAAACCGGAAACGGAAGT	AGCAAAACCTAAAAAAGATTATAAACCGGA
AACGGAAGTAGCGAAATATAAACCGGAAACGAAAGT	AGCAAAATATAAACCGGA
AACGGAAGTAGCGAAACCTAAAAAATATTCTATAAA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP013293.1|WP_041093928.1|196136_197540_+|asparagine--tRNA-ligase	unknown	unknown	gnl|CDD|235176
NZ_AP013293.1|WP_075050676.1|205415_206627_+|signal-peptidase-I	unknown	unknown	gnl|CDD|182787
NZ_AP013293.1|WP_041093936.1|201130_201463_-|DNA-directed-RNA-polymerase-subunit-omega	unknown	unknown	unknown
NZ_AP013293.1|WP_041093945.1|204556_205270_+|4-hydroxy-tetrahydrodipicolinate-reductase	unknown	unknown	gnl|CDD|223366
NZ_AP013293.1|WP_075050675.1|200488_200929_+|50S-ribosomal-protein-L9	unknown	unknown	gnl|CDD|234659
NZ_AP013293.1|WP_041093952.1|206829_207582_+|shikimate-dehydrogenase	unknown	unknown	gnl|CDD|223247
NZ_AP013293.1|WP_041093930.1|197789_198107_+|50S-ribosomal-protein-L21	unknown	unknown	gnl|CDD|376395
NZ_AP013293.1|WP_041093938.1|201469_202357_-|hypothetical-protein	unknown	unknown	gnl|CDD|274513
NZ_AP013293.1|WP_075050674.1|192827_195290_-|hypothetical-protein	unknown	unknown	gnl|CDD|274514
NZ_AP013293.1|WP_041093943.1|203404_204406_+|peptide-chain-release-factor-2	unknown	unknown	gnl|CDD|234799
NZ_AP013293.1|WP_041093924.1|189426_190749_+|cytochrome-c-biogenesis-protein-ResB	unknown	unknown	unknown
NZ_AP013293.1|WP_041093941.1|202340_203240_-|4-hydroxy-tetrahydrodipicolinate-synthase	unknown	unknown	gnl|CDD|235107
NZ_AP013293.1|WP_041093934.1|198807_199149_+|30S-ribosomal-protein-S6	unknown	unknown	gnl|CDD|275385
NZ_AP013293.1|WP_041093954.1|207578_208559_-|GTPase-ObgE	unknown	unknown	gnl|CDD|237048
NZ_AP013293.1|WP_041093950.1|206639_206837_+|30S-ribosomal-protein-S21	unknown	unknown	gnl|CDD|376472
NZ_AP013293.1|WP_171815086.1|190751_192521_+|cytochrome-c-biogenesis-protein-CcsA	unknown	unknown	gnl|CDD|274447
NZ_AP013293.1|WP_041093922.1|188392_189370_-|tryptophan--tRNA-ligase	unknown	unknown	gnl|CDD|234866
NZ_AP013293.1|WP_041093932.1|198112_198364_+|50S-ribosomal-protein-L27	unknown	unknown	gnl|CDD|235464
NZ_AP013293.1|WP_041093926.1|195582_196137_+|ribosome-recycling-factor	unknown	unknown	gnl|CDD|178850
NZ_AP013293.1|WP_041093920.1|187385_188396_-|Mrp/NBP35-family-ATP-binding-protein	unknown	unknown	gnl|CDD|378455

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_AP013293.1|WP_041093928.1|196136_197540_+|asparagine--tRNA-ligase	gnl|CDD|235176	PRK03932, asnC, asparaginyl-tRNA synthetase; Validated.	0
NZ_AP013293.1|WP_075050676.1|205415_206627_+|signal-peptidase-I	gnl|CDD|182787	PRK10861, PRK10861, signal peptidase I.	1.29284e-12
NZ_AP013293.1|WP_041093945.1|204556_205270_+|4-hydroxy-tetrahydrodipicolinate-reductase	gnl|CDD|223366	COG0289, DapB, Dihydrodipicolinate reductase [Amino acid transport and metabolism].	1.89123e-47
NZ_AP013293.1|WP_075050675.1|200488_200929_+|50S-ribosomal-protein-L9	gnl|CDD|234659	PRK00137, rplI, 50S ribosomal protein L9; Reviewed.	2.98721e-22
NZ_AP013293.1|WP_041093952.1|206829_207582_+|shikimate-dehydrogenase	gnl|CDD|223247	COG0169, AroE, Shikimate 5-dehydrogenase [Amino acid transport and metabolism].	1.46252e-50
NZ_AP013293.1|WP_041093930.1|197789_198107_+|50S-ribosomal-protein-L21	gnl|CDD|376395	pfam00829, Ribosomal_L21p, Ribosomal prokaryotic L21 protein.	1.55668e-22
NZ_AP013293.1|WP_041093938.1|201469_202357_-|hypothetical-protein	gnl|CDD|274513	TIGR03302, OM_YfiO, outer membrane assembly lipoprotein YfiO. Members of this protein family include YfiO, a near-essential protein of the outer membrane, part of a complex involved in protein insertion into the bacterial outer membrane. Many proteins in this family are annotated as ComL, based on the involvement of this protein in natural transformation with exogenous DNA in Neisseria gonorrhoeae. This protein family shows sequence similarity to, but is distinct from, the tol-pal system protein YbgF (TIGR02795). [Protein fate, Protein and peptide secretion and trafficking].	1.19333e-05
NZ_AP013293.1|WP_075050674.1|192827_195290_-|hypothetical-protein	gnl|CDD|274514	TIGR03303, OM_YaeT, outer membrane protein assembly complex, YaeT protein. Members of this protein family are the YaeT protein of the YaeT/YfiO complex for assembling proteins into the outer membrane of Gram-negative bacteria. This protein is similar in sequence and function to a non-essential paralog, YtfM, that is also in the Omp85 family. Members of this family typically have five tandem copies of the surface antigen variable number repeat (pfam07244), followed by an outer membrane beta-barrel domain (pfam01103), while the YtfM family typically has a single pfam07244 repeat. [Protein fate, Protein and peptide secretion and trafficking].	1.00723e-42
NZ_AP013293.1|WP_041093943.1|203404_204406_+|peptide-chain-release-factor-2	gnl|CDD|234799	PRK00578, prfB, peptide chain release factor 2; Validated.	1.15927e-122
NZ_AP013293.1|WP_041093941.1|202340_203240_-|4-hydroxy-tetrahydrodipicolinate-synthase	gnl|CDD|235107	PRK03170, PRK03170, dihydrodipicolinate synthase; Provisional.	1.00712e-109
NZ_AP013293.1|WP_041093934.1|198807_199149_+|30S-ribosomal-protein-S6	gnl|CDD|275385	cd00473, bS6, Bacterial ribosomal protein S6. bS6 is one of the components of the small subunit of the prokaryotic ribosome, a ribonucleoprotein organelle that decodes the genetic information in messenger RNA and forms peptide bonds to synthesize the corresponding polypeptides. Ribosomes consist of a large and a small subunit, which assemble during the initiation stage of protein synthesis. Prokaryotic ribosomes consist of three molecules of RNA and more than 50 proteins. The small subunits of bacterial and eukaryotic ribosomes have the same overall shapes (with structural elements described as head, body, platform, beak and shoulder). The bacterial ribosomal protein S6 is important for the assembly of the central domain of the small subunit via heterodimerization with ribosomal protein S18.	1.27078e-22
NZ_AP013293.1|WP_041093954.1|207578_208559_-|GTPase-ObgE	gnl|CDD|237048	PRK12299, obgE, GTPase CgtA; Reviewed.	2.18794e-162
NZ_AP013293.1|WP_041093950.1|206639_206837_+|30S-ribosomal-protein-S21	gnl|CDD|376472	pfam01165, Ribosomal_S21, Ribosomal protein S21.	1.20639e-06
NZ_AP013293.1|WP_171815086.1|190751_192521_+|cytochrome-c-biogenesis-protein-CcsA	gnl|CDD|274447	TIGR03144, cytochrome_c_biogenesis_protein_chloroplast, cytochrome c-type biogenesis protein CcsB. Members of this protein family represent one of two essential proteins of system II for c-type cytochrome biogenesis. Additional proteins tend to be part of the system but can be replaced by chemical reductants such as dithiothreitol. This protein is designated CcsB in Bordetella pertussis and some other bacteria, resC in Bacillus (where there is additional N-terminal sequence), and CcsA in chloroplast. We use the CcsB designation here. Member sequences show regions of strong sequence conservation and variable-length, poorly conserved regions in between; sparsely filled columns were removed from the seed alignment prior to model construction. [Energy metabolism, Electron transport, Protein fate, Protein modification and repair].	3.26584e-61
NZ_AP013293.1|WP_041093922.1|188392_189370_-|tryptophan--tRNA-ligase	gnl|CDD|234866	PRK00927, PRK00927, tryptophanyl-tRNA synthetase; Reviewed.	3.1821e-103
NZ_AP013293.1|WP_041093932.1|198112_198364_+|50S-ribosomal-protein-L27	gnl|CDD|235464	PRK05435, rpmA, 50S ribosomal protein L27; Validated.	7.04754e-44
NZ_AP013293.1|WP_041093926.1|195582_196137_+|ribosome-recycling-factor	gnl|CDD|178850	PRK00083, frr, ribosome recycling factor; Reviewed.	3.01543e-42
NZ_AP013293.1|WP_041093920.1|187385_188396_-|Mrp/NBP35-family-ATP-binding-protein	gnl|CDD|378455	pfam10609, ParA, NUBPL iron-transfer P-loop NTPase. This family contains ATPases involved in plasmid partitioning. It also contains the cytosolic Fe-S cluster assembling factor NBP35 which is required for biogenesis and export of both ribosomal subunits.	5.12879e-123

Protein sequences

>NZ_AP013293.1|WP_041093934.1|198807_199149_+|30S-ribosomal-protein-S6
MKYETLFILNPVLSEEQMKYCVYEYIDFFFKKKAKLLFQEHWGLKKLAYYIQNKINGYYHVFYYKVNSQFISKLELKIRRDERIIRFFSVKIDKDASLYIKRNKSNLVQADFF
>NZ_AP013293.1|WP_041093932.1|198112_198364_+|50S-ribosomal-protein-L27
MAHKKGVGSSRNGRDSIGKRLGVKLFGGQIAKPGSIIIRQRGTKHHPKKNVYMGKDYSIHSLIYGKVFFEKKKKSFISVIPIL
>NZ_AP013293.1|WP_041093930.1|197789_198107_+|50S-ribosomal-protein-L21
MEAYFEILGYQYKAYLNRSIYIPFLEKEKIGNDIYINHIFFFKKEKLIMIGNPIINNIKIKARIIKHFRSNKLIIFKKKRRKGYKLKKGHRQYLTQIKIISFEKK
>NZ_AP013293.1|WP_041093928.1|196136_197540_+|asparagine--tRNA-ligase
MIINSNYIYNILINYNFFLFKKINVKGWVKHFRYNYFLNINDGSSLKDLQIIIDNKYFNIFFLKKINIGVSLEIIGILVLSKGQKQNIEIYANRIKILGSFKMEDLQKTILQKKKHSLKKLREQSYLRFRTNIFSSIMRIRHNIAFSIHKFFYKKNFFYINTPIITTYDTEGAGDMFKVTNFKLKQIPINEFGEINKTLDFFGDFTYLTVSGQLQGEAAVSGLGKIYTFGPTFRAEKSNTFRHLSEFWMIEPEMAFYKLNHNMILAENLLKYVIKYVINNCYDDLFFLEKKNINRLYSILNSSFKRISYTNAIKILKYSKYNKNGKFFFPVKWGTDLQSEHEKFLSEHYFNNCPIIIYNYPLRIKPFYMRINDDNKTVAAMDVIFPIIGEIIGGSQREERYNFLLKRMIELNLNIKSLWWYLNIRRFGSVPHSGFGLGFERLIQFITNINNIKDIIPFPRFQKNAFF
>NZ_AP013293.1|WP_041093926.1|195582_196137_+|ribosome-recycling-factor
MKESFDLIKKFKLEVKDKKEKFKKKILKIRIDRINENFLDSINIEYYGQKVPINNLSTILKVNAITVFIKPWEKKYLNIIYKTLLKEDRGFIIINDGKMIKLKISKLTEETRKKLIKKVKFFLEKKKIEIRNLRNEVNKKLKKFSYLEEDFLKKKKNEIQNITDKYLEKINVIFKQKEKEILTI
>NZ_AP013293.1|WP_075050674.1|192827_195290_-|hypothetical-protein
MNNFLSILRYLIIELFLELNFQPAYSENKIMIKENFNKENFQPAHSENKIMIKENFNKENFFKIKKIKIYGNNEILSLIDLKEGDKIDIKKYNFDKTINNLLKYGNFKDIKIHIHYLNNKEIILEISSNEIDYFNTIEVIGITEKESKLIFDKDFLKKDLNDDLIIFFLKRINEFYEKKGYTNIQYQMDYEENNKLKITVKKGNLFKIKDLIIEGNNFFSKEEIKNIMINSFKEQIFVKDKFKLDQENLINLFKINGFKEVKILSEKIKKINNNYYLLNLKIDQGNQYFLRNCSFKGNKFFNDNILKQKFNSIQNKIFNLLEIKSLVLNESNPNSLISEYKKNGYFNPKFSFSEKKVDDNVLDLEISILENEKFYFNKINLIGNKKVKDSILLQEITFSPGDLWSHKKIIKSLENLKKLDLFENVDWNNETNKTKNQVDINFLFTEKKNSEINFKMNYKVPDLFGQFFLKIKNFSLLNFLKFNKRPYGDNQKVNFLINLGENLKEINLSFIDPKLFNFSKFKLNLFSSKEKKKNNIESNSNPNLNEEKNYYLTKNKNSIKFIKKLKKMNKLEFHINYDSNKKSFFNKNNLITKVIKTSKNLKFKFLFNKNTIDKKQIFMKTGENFKLKSIFTLPSLLRISNFKKKFFEYFQFQLKTILYNQFFNNLMTKIGYEFGFILNNNSNNLNNFYMGGTNFEKDNLNKENFIPLRGYSEPNKFLGVITPKNGGVIYNKYKSELRYLILDKNWFKFWISNFFEAGNIFDNYKNFSLFNLKRSIGTGLRLFVNYIGYLGCDLSYRLDKTLDKTTKPGWKLNFIFDNKF
>NZ_AP013293.1|WP_171815086.1|190751_192521_+|cytochrome-c-biogenesis-protein-CcsA
MSINKLNIKKHIILIFFCFFFINFNYGNSNFKNLDKKRFYLEPSHTKKFGTILVQDSNGRIKPMNTVALELLRKISKTDHIQNIDANNWLLSFYKNDIYWFIYPFIKVNKKLGPKLLELFKVNEDGYTCFINFYKNVTKYSDKKKKYELIFKKELKEAFSKNPFERNDFDKEIVDLFRTINMISNILKGKYIKIFPVPNNENMAWEPWINPKSNLENILPFKEYLESLSYSKKTNNWDKPNQILDNIISFQKKNGLSLIPSNKKVKLEILYNKLNINTFLMYSYIYLGIIILLYSFFRIFNKKKKINFINYILYILLYIFFLYHTFGLFIRWYVSSHAPWSNEYESIIFISWCTLFSGLLLSKNKNLFVPGVSCITSSILLFIAYFNLINPEITNLTPVLKSYWLIIHVAIIISSYGFLIVSSFLGLLVLIFLFLNKKIRKKRLEFIIFELTIINELSMIIGLFFLTIGTFLGAIWANESWGTYWNWDPKETWALITIMVYVFILHMRFIPLFKGIYIFNFFSFLSLLSIVMTYFGVNYYLSGLHSYAKGENVNILYIFYILFIIIIIIIILSFNDLLDHFIKKKKINN
>NZ_AP013293.1|WP_041093924.1|189426_190749_+|cytochrome-c-biogenesis-protein-ResB
MKKIINFFLSKIFFLLLIIIYIIALAIATFLEEKYSTETAQAIIYYSKWFEIIMLLLVINFIGNIKKYKLFNLKKWPILTFHISFLFIILGGGISRYFGFDGTLLIREGNKSNHFFSKKKYLQINLSDNNKCSCFKQNYIISDIHNHFEKFFYFKNNIFLIKLENYLKNVKEIFINDKLGEKYINIITINNNISKYHFIQSGSLKEIEGYYISFNKHVKGIINIYELNNKIYIETPLNLKSELKLSYIYNIYNFKFFIKSKPILVKKYLIPINNKYNLSNYPSYINGFIYKQNLFKKFDILISKNFKLIKNKINFLGNNISITYGPIELELPFFVKLKKFILEKYPGSLNPSFFKSELQIIYGNKINNFYISMNNIFDYKGYRFFQSGYNSDEKGTILYINHDFWGYNISYFGYLILIISVFFISFCKNSRFGKLKSQFK
>NZ_AP013293.1|WP_041093922.1|188392_189370_-|tryptophan--tRNA-ligase
MSRILTGIKSTGIPHIGNVLGVMLPIIDIVNNSLEKVFILIADLHSLTKIKNIKDIKDNTYKIAAAWLACGLNIDKAILYKQSDIPQITELFWYLNCFFPYKRLKLSHSFKNIKNSNKNRNIGLFTYPILMAADILLFETKIVFVGKDQLQHIEITRKIAKKINNKIKKIFVIPEAKMKKNSMSIPGIDGSKMSKSKKNTINIFYSKKEIKKQIMNIHTNNNKISYYEELNNDIIYNIYILLANKAEILNFEKKILFEKEFGYEKAKIELYKYIIYSFSNERKKYKFFLKNKNIIYYILNKGAEEAQKIANITMIKIKNAFNKKK
>NZ_AP013293.1|WP_041093920.1|187385_188396_-|Mrp/NBP35-family-ATP-binding-protein
MNKIKYKILKLIKKIGIKNKIDIIIYNNNKILIKIELNHINDKKKIESKIKKCIYKNIYKNIKIKIISNIKEKKYINNIKNIIVIASGKGGVGKSTIAANIALTISNLGFKVGLLDADLYGPSIPLMFDIENEKISIIEIENCKKILPIIKYGIKILSIGFFSELNQAIVWRGPMASKAIKEFINESFWDKLDFLIVDLPPGTGDITLSLIQELNITGVILVSTPQIISLIDVRKSIAMFNLKQINVPIIGIIENMSFFSPKESPNKKYYIFGEEGVKKMAKYLNIKFLGEIPIIESIRKSADFGCPIVLKNEKKIYYIFLKIAKKIINFTYINNI
>NZ_AP013293.1|WP_075050675.1|200488_200929_+|50S-ribosomal-protein-L9
MKVILLKKNNNLGKKFEEIDVKPGYGRNFLLPKRYVIIATNSVRKKIIEFKKKIIQNKIKNLKKIFFFLKKKKKIEITFYLKLGKNGKLLGSITKKNIKKIFFLKKNKIKKIFLEKRKINKIGIFNGYFNLPYKIKYKFLFKIFYY
>NZ_AP013293.1|WP_041093936.1|201130_201463_-|DNA-directed-RNA-polymerase-subunit-omega
MIDLKYKNSDLSTYSIDLKKIENTGNNIYDLVQILAKRAYQINYFMKESLYSKIGIFGQEKDKFEKIILNDLRIKISKKYEIMTKPTSISIIEFLDYLLSFKKIKKKLKN
>NZ_AP013293.1|WP_041093938.1|201469_202357_-|hypothetical-protein
MNIFINLLFFFKYEKSFMIHNHKMINLIQIFDKTQITNKRFKKNIKRALNFFHKEKYEETLKVLKEVLSEKKNSLNKEKTIYKKIIFFRGLCNYFLLNFDTAILDFKSVFFKFDTNFLSEESLFYLGMCYYFKSNDFNFDQKNTYKVIDLFLKFKQLYPNSIRIKEVDSNLYKAVFKIKQKHLTIAYYYFNKKNYKSSLIIFKYLIKYFLYMPDSQIFYIYMIISQYKIEENNKNYSFQETRKLYDNYLSFFKKNDNNFKIENKLKISNKILFLFKKIESYLIIVDIYSKLYLNK
>NZ_AP013293.1|WP_041093941.1|202340_203240_-|4-hydroxy-tetrahydrodipicolinate-synthase
MKKLLGLGIALITPFNKQGKIDFTSLENLVSSVIDGGVKYLVLLGTTGEACTLKLKEKIDIINCVKNVNNDRLPIVLGIGSNNTKKVIYNLNRINLDRIDAILSVCPYYNKPTQKGIYNHFKKISDNTDKNIIIYNVPHRTGCNINIETINKLIKKKNIIGIKEASGNLIQSYNFIKKKTSKKFIILSGDDNLVLPIILGGGDGIISVIGQAFPKEFSKIILLIKKKKINYAYKIYYNIINIISLIFKEGNPSGIKTLLKLKGLCHEYVRLPLFKSSPNFEKKLFLELKKVHLFNEYIH
>NZ_AP013293.1|WP_041093943.1|203404_204406_+|peptide-chain-release-factor-2
MIAKEKIKKIWIKIKFFYFLLKIKNIKYKKKNKKKVKYLYIFIYKLLYDIKILLINIKFLKKIELINKLNKIKNSIYKIESKILFTKKVYKLNAIIQITPGAGGTESCDWVSMLYRMYTMWAEKNNYSIKELYNLQGDVGGLKYILFEVQGFYPFGFLKGENGVHRLVRISPFDDSKRHTSFASVYIYPLINDDIKIQINNSDIKWSTFRSGGSGGQNVNKVETGVRLHHKPTNIIIENTETRSQINNKTKALKLLKSRLYYIEKKNKNIIRKKNKLKKIEWGSQIRNYIMHPYKLVKDLKTGYETSNINSVMDGNINNFLKNYLILLLKTKK
>NZ_AP013293.1|WP_041093945.1|204556_205270_+|4-hydroxy-tetrahydrodipicolinate-reductase
MNIGLIGYGKMGKSIEKQAILRGHKISFITNKTPTYKELKKNDIEMVIEFSSPKYAVSNIIICIENNISVVCGTTGWYKHFFFIKKKCKKYNGSFLYSPNFSIGVNILFYINKLLAKLMFKSNLDYKVSIKEIHHKNKLDTPSGTALLLAEDIIIEKYCDNWGLINFKKKKKSIYIDSKRINNIIGIHSVIYNSSIDSIEIKHNANNRKGFALGSIIAAEWLFKKTGIFSMKDVLKL
>NZ_AP013293.1|WP_075050676.1|205415_206627_+|signal-peptidase-I
MSILKRPIWWSILLYFPIIFFLIYPLLCLDIINLYKERHNKKILFLTMGAYLIYLNIKNKVLLNNINNKKKTSLFSYFIFSSFIKIYIIQFFFIPTPSMQDSLLVGDFLFVSKFHYGIRIPITQIFFPSENNEIKFLGIKSYINYIKLPYIRLPKFKTIKYNDILVFNFPNDLKEIPIDRTKYYIKRCIGLPGDNLKIKNGFIYINGILKSNDKNVFFYKIQKIFNSFNILFFLKKLCLKKDYIYNIKINDYKINFFKKNILYIKKNIMPKYLKEYNIFPEDKFWNRDNYGPIYIPKIGDNISINKKNINLYKDIIVKYEKNSLKLKDGNIFINNKKTSNYKIKKNYYFLLGDNRNNSLDSRYWGFLPYDYIVGKPLFIILNLIFNKKKIFKLRWNRIFTILK
>NZ_AP013293.1|WP_041093950.1|206639_206837_+|30S-ribosomal-protein-S21
MKLITNVKEGESIDRVLKKCKQKFDKARILKKLRKRQHYIKPSERKRKKLIKAKYREYINSKNYD
>NZ_AP013293.1|WP_041093952.1|206829_207582_+|shikimate-dehydrogenase
MIKIYGLVGKNISYSFSNSFFKRKFKKENIKNTIYNIFDIKKLSLINEIIKVNKNFLGFNVTIPYKKKIISKINIINNNLKKIGSINTVKIINDITIGYNTDIYGFENSFKLKLKSYHNNALILGNGGVSKSIIYVLTKLGIKYLVVSRNKKNGISYSNISKEIINNNNIIINCTPLGTYPNINECPNIPYEFLSKKHYLYDLVYNPKETLFLKKGKNIGCIVQNGLNMLYLQANLSWKIWNEINFDILY
>NZ_AP013293.1|WP_041093954.1|207578_208559_-|GTPase-ObgE
MINKFIDFIKIYCKSGNGGSGLIHFRREKFINKGGPDGGDGGKGGNVIIKGNNQLYTISHLKYKKHNIAENGKNGGINRITGSNGKDCIIEVPIGTIIKDEYKNIIMEILNHNEKKILLYGGKGGKGNWHFKNAICQAPFYSEKGKIVKEFCFFLELKILADVGIIGFPNSGKSTLISIITSSKPKISNYPFTTLNPNIGILNYKKFKKLVIADIPGIIKGASKGKGLGFKFMKHIQRNRIILIMISCEEKNYIKEYNIILNELNFFDKKILNKKRLLLISKSDHLDNELKYEIINKLKKNEKYIFISSFSKEGLDELINYICNII

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_AP013293_2	2.1|199645|42|NZ_AP013293|CRT	199645-199686	42	NZ_AP013293.1	199438-199479	0	1.0
NZ_AP013293_2	2.1|199645|42|NZ_AP013293|CRT	199645-199686	42	NZ_AP013293.1	199567-199608	0	1.0
NZ_AP013293_2	2.2|199723|42|NZ_AP013293|CRT	199723-199764	42	NZ_AP013293.1	199438-199479	0	1.0
NZ_AP013293_2	2.2|199723|42|NZ_AP013293|CRT	199723-199764	42	NZ_AP013293.1	199567-199608	0	1.0
NZ_AP013293_2	2.4|199855|30|NZ_AP013293|CRT	199855-199884	30	NZ_AP013293.1	199489-199518	1	0.967
NZ_AP013293_2	2.4|199855|30|NZ_AP013293|CRT	199855-199884	30	NZ_AP013293.1	199399-199428	2	0.933
NZ_AP013293_2	2.4|199855|30|NZ_AP013293|CRT	199855-199884	30	NZ_AP013293.1	199528-199557	2	0.933

1. spacer 2.1|199645|42|NZ_AP013293|CRT matches to position: 199438-199479, mismatch: 0, identity: 1.0

agcaaaacctaaaagatcttataaaagaaaacttaaacctga	CRISPR spacer
agcaaaacctaaaagatcttataaaagaaaacttaaacctga	Protospacer
******************************************

2. spacer 2.1|199645|42|NZ_AP013293|CRT matches to position: 199567-199608, mismatch: 0, identity: 1.0

agcaaaacctaaaagatcttataaaagaaaacttaaacctga	CRISPR spacer
agcaaaacctaaaagatcttataaaagaaaacttaaacctga	Protospacer
******************************************

3. spacer 2.2|199723|42|NZ_AP013293|CRT matches to position: 199438-199479, mismatch: 0, identity: 1.0

agcaaaacctaaaagatcttataaaagaaaacttaaacctga	CRISPR spacer
agcaaaacctaaaagatcttataaaagaaaacttaaacctga	Protospacer
******************************************

4. spacer 2.2|199723|42|NZ_AP013293|CRT matches to position: 199567-199608, mismatch: 0, identity: 1.0

agcaaaacctaaaagatcttataaaagaaaacttaaacctga	CRISPR spacer
agcaaaacctaaaagatcttataaaagaaaacttaaacctga	Protospacer
******************************************

5. spacer 2.4|199855|30|NZ_AP013293|CRT matches to position: 199489-199518, mismatch: 1, identity: 0.967

agcaaaacctaaaaaagattataaaccgga	CRISPR spacer
agcaaaacctaaaaaagattataaacctga	Protospacer
*************************** **

6. spacer 2.4|199855|30|NZ_AP013293|CRT matches to position: 199399-199428, mismatch: 2, identity: 0.933

agcaaaacctaaaaaagattataaaccgga	CRISPR spacer
agcaaaacctaaaaaagattataaaactga	Protospacer
************************* * **

7. spacer 2.4|199855|30|NZ_AP013293|CRT matches to position: 199528-199557, mismatch: 2, identity: 0.933

agcaaaacctaaaaaagattataaaccgga	CRISPR spacer
agcaaaacctaaaaaagattataaaactga	Protospacer
************************* * **

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_AP013293_1	1.1|157581|24|NZ_AP013293|CRISPRCasFinder	157581-157604	24	NC_015919	Borreliella bissettii DN127 plasmid lp54, complete sequence	5610-5633	2	0.917
NZ_AP013293_1	1.1|157581|24|NZ_AP013293|CRISPRCasFinder	157581-157604	24	NZ_CP031397	Borreliella burgdorferi strain MM1 plasmid plsm_lp54, complete sequence	5726-5749	2	0.917
NZ_AP013293_1	1.1|157581|24|NZ_AP013293|CRISPRCasFinder	157581-157604	24	NZ_CP028870	Borreliella garinii strain 20047 plasmid lp28-3, complete sequence	3032-3055	2	0.917
NZ_AP013293_1	1.1|157581|24|NZ_AP013293|CRISPRCasFinder	157581-157604	24	NZ_CP019854	Borreliella burgdorferi plasmid lp54, complete sequence	5582-5605	2	0.917
NZ_AP013293_1	1.1|157581|24|NZ_AP013293|CRISPRCasFinder	157581-157604	24	NZ_CP019765	Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_lp54, complete sequence	5582-5605	2	0.917
NZ_AP013293_1	1.1|157581|24|NZ_AP013293|CRISPRCasFinder	157581-157604	24	NC_011784	Borreliella burgdorferi ZS7 plasmid ZS7_lp54, complete sequence	5538-5561	2	0.917
NZ_AP013293_1	1.1|157581|24|NZ_AP013293|CRISPRCasFinder	157581-157604	24	NC_013130	Borreliella burgdorferi N40 plasmid N40_lp54, complete sequence	5576-5599	2	0.917
NZ_AP013293_1	1.1|157581|24|NZ_AP013293|CRISPRCasFinder	157581-157604	24	NC_013128	Borrelia burgdorferi 297 plasmid 297_lp54, complete sequence	3291-3314	2	0.917
NZ_AP013293_1	1.1|157581|24|NZ_AP013293|CRISPRCasFinder	157581-157604	24	NC_013129	Borreliella burgdorferi JD1 plasmid JD1_lp54, complete sequence	5567-5590	2	0.917
NZ_AP013293_1	1.1|157581|24|NZ_AP013293|CRISPRCasFinder	157581-157604	24	NC_001857	Borreliella burgdorferi B31 plasmid lp54, complete sequence	5582-5605	2	0.917
NZ_AP013293_1	1.1|157581|24|NZ_AP013293|CRISPRCasFinder	157581-157604	24	NZ_CP017218	Borreliella burgdorferi strain B331 plasmid B331_lp54, complete sequence	48152-48175	2	0.917
NZ_AP013293_1	1.1|157581|24|NZ_AP013293|CRISPRCasFinder	157581-157604	24	NZ_CP022536	Spiroplasma corruscae strain EC-1 plasmid unnamed, complete sequence	29167-29190	3	0.875
NZ_AP013293_1	1.1|157581|24|NZ_AP013293|CRISPRCasFinder	157581-157604	24	MN938931	Streptococcus phage D4446, complete genome	29965-29988	3	0.875
NZ_AP013293_2	2.4|199855|30|NZ_AP013293|CRT	199855-199884	30	MN698248	Pelagibacter phage HTVC202P, complete genome	1876-1905	6	0.8
NZ_AP013293_2	2.4|199855|30|NZ_AP013293|CRT	199855-199884	30	AP013559	Uncultured Mediterranean phage uvMED isolate uvMED-CGR-C43-MedDCM-OCT-S32-C95, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces	7580-7609	6	0.8
NZ_AP013293_2	2.4|199855|30|NZ_AP013293|CRT	199855-199884	30	KY971610	Pseudomonas phage PspYZU05, complete genome	121624-121653	7	0.767
NZ_AP013293_2	2.4|199855|30|NZ_AP013293|CRT	199855-199884	30	CP024686	Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-2-313K, complete sequence	143142-143171	8	0.733
NZ_AP013293_2	2.4|199855|30|NZ_AP013293|CRT	199855-199884	30	MN694799	Marine virus AFVG_250M1004, complete genome	33345-33374	8	0.733
NZ_AP013293_2	2.4|199855|30|NZ_AP013293|CRT	199855-199884	30	NC_019507	Campylobacter phage CP21, complete genome	94175-94204	9	0.7
NZ_AP013293_2	2.4|199855|30|NZ_AP013293|CRT	199855-199884	30	MT932329	Campylobacter phage F379, complete genome	157504-157533	9	0.7
NZ_AP013293_2	2.4|199855|30|NZ_AP013293|CRT	199855-199884	30	MK408758	Campylobacter phage CP20, complete genome	1739-1768	9	0.7
NZ_AP013293_2	2.4|199855|30|NZ_AP013293|CRT	199855-199884	30	HE815464	Campylobacter phage CP21 complete sequence	94175-94204	9	0.7
NZ_AP013293_2	2.4|199855|30|NZ_AP013293|CRT	199855-199884	30	HM246721	Campylobacter phage vB_CcoM-IBB_35 clone Contig2, complete sequence	42301-42330	9	0.7
NZ_AP013293_2	2.4|199855|30|NZ_AP013293|CRT	199855-199884	30	FN667788	Campylobacter phage CP220, complete genome	1739-1768	9	0.7
NZ_AP013293_2	2.4|199855|30|NZ_AP013293|CRT	199855-199884	30	FN667789	Campylobacter phage CPt10, complete genome	1739-1768	9	0.7

1. spacer 1.1|157581|24|NZ_AP013293|CRISPRCasFinder matches to NC_015919 (Borreliella bissettii DN127 plasmid lp54, complete sequence) position: , mismatch: 2, identity: 0.917

aaaaatttattattattgtattgt	CRISPR spacer
aaaaatttattgttattgttttgt	Protospacer
***********.******* ****

2. spacer 1.1|157581|24|NZ_AP013293|CRISPRCasFinder matches to NZ_CP031397 (Borreliella burgdorferi strain MM1 plasmid plsm_lp54, complete sequence) position: , mismatch: 2, identity: 0.917

aaaaatttattattattgtattgt	CRISPR spacer
aaaaatttattgttattgttttgt	Protospacer
***********.******* ****

3. spacer 1.1|157581|24|NZ_AP013293|CRISPRCasFinder matches to NZ_CP028870 (Borreliella garinii strain 20047 plasmid lp28-3, complete sequence) position: , mismatch: 2, identity: 0.917

aaaaatttattattattgtattgt	CRISPR spacer
aaaaattttttattattatattgt	Protospacer
******** ********.******

4. spacer 1.1|157581|24|NZ_AP013293|CRISPRCasFinder matches to NZ_CP019854 (Borreliella burgdorferi plasmid lp54, complete sequence) position: , mismatch: 2, identity: 0.917

aaaaatttattattattgtattgt	CRISPR spacer
aaaaatttattgttattgttttgt	Protospacer
***********.******* ****

5. spacer 1.1|157581|24|NZ_AP013293|CRISPRCasFinder matches to NZ_CP019765 (Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_lp54, complete sequence) position: , mismatch: 2, identity: 0.917

aaaaatttattattattgtattgt	CRISPR spacer
aaaaatttattgttattgttttgt	Protospacer
***********.******* ****

6. spacer 1.1|157581|24|NZ_AP013293|CRISPRCasFinder matches to NC_011784 (Borreliella burgdorferi ZS7 plasmid ZS7_lp54, complete sequence) position: , mismatch: 2, identity: 0.917

aaaaatttattattattgtattgt	CRISPR spacer
aaaaatttattgttattgttttgt	Protospacer
***********.******* ****

7. spacer 1.1|157581|24|NZ_AP013293|CRISPRCasFinder matches to NC_013130 (Borreliella burgdorferi N40 plasmid N40_lp54, complete sequence) position: , mismatch: 2, identity: 0.917

aaaaatttattattattgtattgt	CRISPR spacer
aaaaatttattgttattgttttgt	Protospacer
***********.******* ****

8. spacer 1.1|157581|24|NZ_AP013293|CRISPRCasFinder matches to NC_013128 (Borrelia burgdorferi 297 plasmid 297_lp54, complete sequence) position: , mismatch: 2, identity: 0.917

aaaaatttattattattgtattgt	CRISPR spacer
aaaaatttattgttattgttttgt	Protospacer
***********.******* ****

9. spacer 1.1|157581|24|NZ_AP013293|CRISPRCasFinder matches to NC_013129 (Borreliella burgdorferi JD1 plasmid JD1_lp54, complete sequence) position: , mismatch: 2, identity: 0.917

aaaaatttattattattgtattgt	CRISPR spacer
aaaaatttattgttattgttttgt	Protospacer
***********.******* ****

10. spacer 1.1|157581|24|NZ_AP013293|CRISPRCasFinder matches to NC_001857 (Borreliella burgdorferi B31 plasmid lp54, complete sequence) position: , mismatch: 2, identity: 0.917

aaaaatttattattattgtattgt	CRISPR spacer
aaaaatttattgttattgttttgt	Protospacer
***********.******* ****

11. spacer 1.1|157581|24|NZ_AP013293|CRISPRCasFinder matches to NZ_CP017218 (Borreliella burgdorferi strain B331 plasmid B331_lp54, complete sequence) position: , mismatch: 2, identity: 0.917

aaaaatttattattattgtattgt	CRISPR spacer
aaaaatttattgttattgttttgt	Protospacer
***********.******* ****

12. spacer 1.1|157581|24|NZ_AP013293|CRISPRCasFinder matches to NZ_CP022536 (Spiroplasma corruscae strain EC-1 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.875

aaaaatttattattattgtattgt	CRISPR spacer
taaaatttattattattgaattat	Protospacer
 ***************** ***.*

13. spacer 1.1|157581|24|NZ_AP013293|CRISPRCasFinder matches to MN938931 (Streptococcus phage D4446, complete genome) position: , mismatch: 3, identity: 0.875

aaaaatttattattattgtattgt	CRISPR spacer
taaaaattattattattgttttgt	Protospacer
 **** ************* ****

14. spacer 2.4|199855|30|NZ_AP013293|CRT matches to MN698248 (Pelagibacter phage HTVC202P, complete genome) position: , mismatch: 6, identity: 0.8

agcaaaacctaaaaaagattataaaccgga	CRISPR spacer
cgcaaaaactaaaaaagaatataagaggga	Protospacer
 ****** ********** *****.  ***

15. spacer 2.4|199855|30|NZ_AP013293|CRT matches to AP013559 (Uncultured Mediterranean phage uvMED isolate uvMED-CGR-C43-MedDCM-OCT-S32-C95, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces) position: , mismatch: 6, identity: 0.8

agcaaaacctaaaaaagattataaaccgga	CRISPR spacer
tgcaaaaactaaaaaagaatataagaggga	Protospacer
 ****** ********** *****.  ***

16. spacer 2.4|199855|30|NZ_AP013293|CRT matches to KY971610 (Pseudomonas phage PspYZU05, complete genome) position: , mismatch: 7, identity: 0.767

agcaaaacctaaaaaagattataaaccgga	CRISPR spacer
tcaaaaacctaaaaaagaagataaacgaga	Protospacer
   ***************  ****** .**

17. spacer 2.4|199855|30|NZ_AP013293|CRT matches to CP024686 (Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-2-313K, complete sequence) position: , mismatch: 8, identity: 0.733

agcaaaacctaaaaaagattataaaccgga	CRISPR spacer
agggcaacctaaagaagattataaacgtat	Protospacer
** . ********.************  . 

18. spacer 2.4|199855|30|NZ_AP013293|CRT matches to MN694799 (Marine virus AFVG_250M1004, complete genome) position: , mismatch: 8, identity: 0.733

agcaaaacctaaaaaagattataaaccgga	CRISPR spacer
ctaaaaacctaaaaaaaattttaaacaaaa	Protospacer
   *************.*** ***** ..*

19. spacer 2.4|199855|30|NZ_AP013293|CRT matches to NC_019507 (Campylobacter phage CP21, complete genome) position: , mismatch: 9, identity: 0.7

agcaaaacctaaaaaagattataaaccgga	CRISPR spacer
agcaaaacttaaaatagattatatgttatt	Protospacer
********.***** ******** ....  

20. spacer 2.4|199855|30|NZ_AP013293|CRT matches to MT932329 (Campylobacter phage F379, complete genome) position: , mismatch: 9, identity: 0.7

agcaaaacctaaaaaagattataaaccgga	CRISPR spacer
agcaaaacttaaaatagattatatgttatt	Protospacer
********.***** ******** ....  

21. spacer 2.4|199855|30|NZ_AP013293|CRT matches to MK408758 (Campylobacter phage CP20, complete genome) position: , mismatch: 9, identity: 0.7

agcaaaacctaaaaaagattataaaccgga	CRISPR spacer
agcaaaacttaaaatagattatatgttatt	Protospacer
********.***** ******** ....  

22. spacer 2.4|199855|30|NZ_AP013293|CRT matches to HE815464 (Campylobacter phage CP21 complete sequence) position: , mismatch: 9, identity: 0.7

agcaaaacctaaaaaagattataaaccgga	CRISPR spacer
agcaaaacttaaaatagattatatgttatt	Protospacer
********.***** ******** ....  

23. spacer 2.4|199855|30|NZ_AP013293|CRT matches to HM246721 (Campylobacter phage vB_CcoM-IBB_35 clone Contig2, complete sequence) position: , mismatch: 9, identity: 0.7

agcaaaacctaaaaaagattataaaccgga	CRISPR spacer
agcaaaacttaaaatagattatatgttatt	Protospacer
********.***** ******** ....  

24. spacer 2.4|199855|30|NZ_AP013293|CRT matches to FN667788 (Campylobacter phage CP220, complete genome) position: , mismatch: 9, identity: 0.7

agcaaaacctaaaaaagattataaaccgga	CRISPR spacer
agcaaaacttaaaatagattatatgttatt	Protospacer
********.***** ******** ....  

25. spacer 2.4|199855|30|NZ_AP013293|CRT matches to FN667789 (Campylobacter phage CPt10, complete genome) position: , mismatch: 9, identity: 0.7

agcaaaacctaaaaaagattataaaccgga	CRISPR spacer
agcaaaacttaaaatagattatatgttatt	Protospacer
********.***** ******** ....  

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site
DBSCAN-SWA_1	149373 : 159499	7	Bodo_saltans_virus(16.67%)	tRNA	NA

Sequences of DBSCAN-SWA_1

Nucleotide sequences of DBSCAN-SWA_1

>NZ_AP013293|149373:159499|DBSCAN-SWA
TATGTTTTATAAGACATATTTTATAAAATATATAAAAAAAAAATTTAATTTAAAAAATAAAAAAATATACGTATCAGTTAGTTCTGGATTAGATAGTATGGTTCTGTTAGATGTTCTTATGAAAATATGTAATATTCCAATTTGTGTAATACATTGTAATTTTAAACTAAGAGGTAATGATTCTGATAAAGATGAATTGTTTATACAAGAATTTTGTTTAAAAAACAATATTTTTTTTAAATCTAAAAAGTTTAATACAATTAATAGTAATAGTCATTTTTCAATACAAATGATGGCTAGAAAATTTAGATATGATTGGTTTAAATATTTATTAAATAATTCATATTGTGATTATATAGCTTTAGGGCATAATTTAGATGATTCAATAGAAACTTTTTTTATTAATATTATTAGAGGTACTGGCATAAAAGGCTTAATAGGAATTAAGAATTTTAACAAAAAAATTATTAGACCTTTATATTTTTTTCTTAAAAAAGAAATAATATCATATGCGAATGAAAATAATATTAAATGGCGTGAAGATATTAGTAATTATGATCATAAATATTTAAGAAATAGAATTAGATTTTTTTTAAAACCAATTTTAGATTATAAATTTTATAATGGATTTAAAAAATCTATAAAATATTTATATGATGAATATGTATGTTCTAAAAAACATATTTCTTATCTTTATAAGATAATAACAATTGAAAAAAAAATATACCCATTTTTAGTTAAAATAGATATAAAAAAATTATTAAAATTATATCCACTTTCGACATATTTATTTAAAATATTTTATAAATATGGATTTAATAATACTAAAAATTTAAAAAAAATTTTAAATTCTAAATCAGGTAAAAAAATATTTTCAAAAAAATATTGTCTTATAAAAGAGAGAACTACTTTATTATTAGTAGAAAATAATATTAATTTTATAAAAAAAAATTATTATATACATAATATAGATACGATTAAAATTCCTTTTTTTATATATTTTTTTCTTTCTGAAAGAAAAAAAAAAAAATCATATACATCTTTAGATTTTGATAAATTAATTTTTCCATTAAAATTAAGAAATTGTAAAAAAGGTGATAGATTAAATAAAATTGGTATGAAAGGCAATAAAAAATTAAGTAAATATTTTAAAGAAAAAAAAATTTCTATTGTTGATAAAACAAATATTTGGGTACTTATTAATGGGGATAAAAAAATAATATGTATTATATATGAACGTTTTGAATGTTTAGATAAAAATTTTAAAATTACAAATTTTACAAAAAAAGTTTTAAATTTAAAAAAGCAATAGTTAAAATTTTTTTTTTATATTATAAAAAAATATGTATTATTTTATAAATACAGCTAATTTAGCTAAAATTAAAGAAGCAGAAAATTTAGGTATATTAGATGGAGTTAATACTAATACTTCTTTAATAGTTAAAGAAGGTATAATAAAAAAAAATGATAGATATAGTCATTATAAAAATATTTGCAATATTATCTCAGGAGATTTAAATGCAGATGTAATATCTACAGATTATAATGATATAATAAAAGAAGGAGAATTTTTATCTAATTTAGATAAAAAAATTATAGTAAAAGTACCTCTGACAAGAGATGGTATTAAAGCAATAAAATATTTTTCTATTAAAAAAATTAAAACTAATTGTACTTTAGTATTTTCTACAGGTCAAGCATTGTTAGCTGCTAAGGCAGGTGCTAATTATATTTCTATTTTTATTGGTCGTTTATATAACACAAATATTATAAAAGAAATAAAACTAATTTATGATAATTATTTTTTTAAAACTAAAATATTAGTTACTTCAATTATAAATACTTTCCATATAATATCATGTGCAAAAATAGGTATAGATATAATTACAGCTCCTTTAAATGAAATTAAATTATTATTAAATAATTAATGGCTTTAATAAGATTTAGCAAAAAGAACACGTTGTTTAGATAAATTTTTTGAAAATATACATTTTCCCATATTTTTTTTTAAATTTATTGGTATGCAACGTATTGTAGCATTTGTTTCAACTTTTATTTTTGTTTCTGTTTCAGACGAACCATCCCAATGAGCAAATAAAAATCCACTATTTTTTTTTATTTTTTCTATAAATTCTTCATAAGAATCTACTTCTATTAAAAAATTATTTTTTCTTTTAAGAGCTACTTTCAAAATGTTATCTTGAATTTTAGATAAAATTTTTGGAATTAAAAATTTTAATTTATTAATACTAATATATTTTTTTTCAAGTGTATCCCTTCTTACAACTTCTACAGTTCCTCTATCTATATCTTTTTTTCCTATAGTTATTCTTATAGGAATGCCTTTTATTTCATATTCATTAAATTTCCATCCTGGAGTATAATAAATTCTTTTATCATATTTTATATTTATACCTATTTTTTCAAGAAATTTTTTTAATGGAAATACAAGTTTTTCTATTAAATTAAGTTGTTCTTGAGTTTTATAAACTGGAATAATTACTATTTGTATTGGAGCAATTTTAGGTGGTAATATTAAACCATTATCATCTGAATGTGTCATAATAATAGCGCCAATTAATCTTGTTGAGATTCCCCATGATGTAGCCCACACATACTCTTTATTTCCTTTTTCGGTAGAATATCTAACATCAAACGCTTTTGAAAAATTTTGACCTAAAAAATGAGATGTAGCTATTTGTAAAGATTTCCCATCTTGCATAATCGATTCTATACAATATGTTTTTTCTGCTCCAGCAAATTTTTCACTATCTGTTTTTATTCCCTGTATAACAGGGATAGCCATAAAATTTTCTAAAACATTTGTATATATATTTAAAATTTTTTTAGCTTGATTTATAGCTTCTTTTTTTGTAGAATGAGCGGTATGTCCTTCTTGCCATAAAAATTCAGATGTTCTTAAAAACAACCTTGTACGCCTTTCCCAACGTATTATATTAGCCCATTGATTAAAAAGTATTGGTAGATCTCTATAAGAGTTAATCCAACGTTTATAAGAATTCCATATTATTGTTTCAGATGTAGGTCTAACAATAAGTTCATCTTCAAGTTTAGAAGATTTATCTACTATAATATTTTTATTCTTATAATTTTTTAATCTATAATGAGATATTATTGCGCATTCTTTTGCAAATCCTTTAATATGATTATATTCTTTTGAGAAATATGATTTTGGAATAAGTAAAGGAAAGTAGACATTTTCATGTCCTGTATATTTTAAAATATTATCTAATATAGACTTAATTTTTTCCCATATATAAAATCCATATGGTTTTATAATCATACATCCACGTACATCTGATTTTTCTGCAATATTTGCTCTTAATATAATTTCATTATACCATTTAGAATAATTTTCATTACGTTTAGTTAGTTTTTTCATTTAAAGATTTTTAAAGTTATATATTTATAAAAAAATTAATATATATAAAATGTTATTACATAATATATTTATTGATTCTGAATCAGTTCATATTCTAATTACAGAATATTTATATATACTTCCAGTAAGGAATGTTGTGTTATTTCCAGGTGTAGTAATACCTATTACAGCTGGAAGAAAAAAATCAATTAAATTATTAAAAGATGCATATTCTACTGATAAAATTATTGGGGTTTTAACTCAAAAATATTTTAATACTGAAAATCCGAAAGAACAAGAACTATATTATATAGGTACAGTAGCTAAAATATTAAAATTATTAAAAATGCCTGATGGCAATACTACTGTAATTTTACAAGGTAAAAGTCGATTTAAAGTTATTAAAATGATACAATATTATCCATATTTGACAGCTGAAATAATATATTTAAAAGACAAAAAACCAGGAAAACAAGATAAAGAATATATAGCTTTAATATCTTCTATTAAAGAAATAGCACTAAAAATTATACAAGATAATACTAATATTCCTTCAGAATCTAGTTTCGCAATTAGGAATATAGAAAGTAAATCATTTATTATAAATTTTGTTGCATCTAATATTAATTTAAAAATTAAAAAAAAACAAATTCTTTTAGAATATGATTTCTTTAAACAAAGAGCAATAGAAACTTTTCGTTTTCTAAATATAGAATATAAACAAATTAAATTAAAAAACGATATTAAATATCGTGTTAAAACTGAAATGGATCAACAACAAAAAGAATATTTTTTAAATCAACAAATAAAAGCTATTCAAGAAGAATTAGGAGATTTTTCATATGAAAAAGAAGTCTATGAATTAAGAATTCAATCATATAAAAAAAAATGGTCTAAAAAAGTTCAAAAACAATTTGATAGAGAATTAAATAAATTTCAACGTACTAATACACAAATGCCAGAATATACAATATTACGTAATTATTTAGATTTCATGTTAGATTTACCTTGGAAAAAATATTCTCAAGATAATTTTGATTTAAACCGTGCAAAAAAAATTCTTGATAAGGATCATTTTGGAATTGAGAAAGTTAAAGAAAGAATAATAGAATATTTATCTGTTATAAAACTTAAACAAGATCTTAGGTCACCTATACTATGTTTTTATGGACCTCCAGGTGTAGGTAAGACTTCTTTAGGAAAATCAATTGCTTATGCATTAAATAGAAAGTATATACGTATGTCTTTAGGTGGATTAAATGATGAAGCTGAAATTAGGGGGCATAGAAAAACATATATAGGTGCTATGCCTGGAAGAATATTACAATCAATAAAAAAAGCAGGAACATCTAATCCTGTGTTTGTATTAGATGAAATAGATAAAATGGGAATAGGACATCAAGGAAATCCTTCTTCGGCAATGTTAGAAGTTTTAGATCCAGAGCAAAATAAAGAATTTTATGATAATTTCCTTGAAATTGGATATGATTTATCTAAGATAATTTTCATTGCTACAGCAAATTCACTTTATCCAATTCATATTGCTATATTAGATAGAATGGAAATAATAGATATGAATGGATATACTGTTGAAGAAAAAATAGAAATCTGTAAAAAACATTTAATTCCTAAACAATTAAAAGAAAATGGGTTAAAAAATAACGATCTTATTTTAGGTGTAAAACAAATTGAAAAAATTATTGAAAGTTATACTAGAGAATCAGGGGTTAGATCTCTTGAAAAGAGAATTTCAAAAATTGTAAGAGATGCTGCTAAAAATATTGCTATGAATAAAAAATATTTAAAACGTATAAATTTTTCAAAAATAGAAGAAGTATTAGGACCACCTAATGATCCTGAGAAATATGAATTTACTAAAATCCCCGGAGTAGTTACAGGATTAGCTTGGACTCTTGTAGGAGGAGAGATTCTCTATATAGAATCAACATTATTTAAAGGAAAAGGTTATTTTAGTATAACAGGAAATGTAGGAGAAGTTATGAAAGAATCTGCTACTATAGCTTTAAAATATATAAAAGCTCATAATTATGAATTTGGAATAGATGACAAAATGTTTGAATTGTATAACATACATATTAATGTTCCAGAAGGGGGGATACCTAAAGATGGACCTTCTGCAGGAATTACTATGTTAACTTCTATGATATCTAGTTTTTGGAAAACATCAATACGTCCGTATTTAGCGATGACTGGTGAAATTACCCTTAGAGGAAAGGTTCTTCCTGTAGGAGGAATTAAAGAAAAAATATTAGCAGCAAAAAGAGCTAATATAAAAGAAATTATTCTATCAAAAGATAATAAAAAAGATGTATATGATATAAAAAAAGTTTATTTAAAAGGCCTAAAATTTCATTTTGTTAGTAAAATTAATGAAGTTATAAATTTATCATTTTATGAATAAGAATATATATTTACATAATATTACAAAAAAATATGGAACTCCACTTTATGTATATGATGCCAATAAAATAGAATATCAATATAAATTAATTAAAAAATCTTTTTCTTATATAGAAAATTTAAAAATAAATTATGCTTGTAAAGCAAATACAAATATAAGTATATTAAAATTTTTAAAAAAATTAGGTAGTGGATTAGATACTGTATCTATACAAGAAATAGAAATAGGATTAAAAGCTGGATTTAAACCAAAAGAAATTATATATACTCCTAATAGTGTTTCTTTATCAGAAATAAAAAAAGCAATAAAAGCTGGAGTTATAATTAACATAGATAATTTATCACTTTTAGAACAAATAGGTAATGATAATACTAATTATCCTATAGGAATTAGAATAAACCCCCATATTTTGGGGGGAGGAAATAAAAAAATTTCTGTAGGTCATATAGATTCAAAATTTGGAATATCATATTATCAATTACCTCATATTAAAAAAATTGTAGAAAATACTGGAATTAAAGTTGAAGGAATACATATGCATACAGGTTCTGATATCCTAGATATTGGAGTTTTTTTACAAGGAGCTGATATTTTATTAAACGTAGCTAGTTTTTTCAATGAACTTAAATATATAGATTTTGGTAGTGGATTTAAAGTACCATATAAAAAAAATGATACAAAAACAGATATAGATATGTTAGGTGTTTCTTTAAAAAGAAAATTTTTATTTTTTTGTGAAAAATATTGTAAAAAATTAAAATTATTTTTTGAACCTGGAAAATTTTTAGTTAGTGAATCAGGTAGTTTTATAGTAAAGGTTAATGTTATTAAACATACAACTTCTACTGTATTTGCTGGTGTTGATTCTGGATTTAATCATTTTATACGTCCAATGTTTTATGATTCCTATCATCATATAGATAATATTTCAAATCCATCAGGAATATTCCGTTTTTATACTGTAGTAGGATATATATGTGAATCTGATACATTTTGTGTTAATAGAAAAATTAATGAAATAAGAGAAGGAGATCTCTTATGTTTTAGAAATGCAGGAGCTTATTGTTTTTCTATGTCATCTAACTATAATTCTCGTTATAGGCCTTCTGAAGTTATTATTTATCATAAAAAATATTTTCTTATTAGAAAAAGAGAAAATATGCAAGATTTACTTAACAATATGATTGATATAGAATTATCATAATTTTATTGGATAGATGGCAGAGTGGTCTATTGCGGCGGTCTTGAAAACCGTTGAGTGTAAAAAACTCCGGGGGTTCGAATCCCTCTCTATCCGCTAAGCACTCACTTTACTTTAAAAATTAAAAAGACCATTAATTAATGGCAGGTAATATTTTTGGAAAATTATTTAGAGTAACTACTTTTGGTGAAAGTCATGGACATGCATTAGGAGGTATAATAGATGGATGTCCCTCAGGATTAAAATTAAATTTTGAAGAAATAAATAATGAATTAAATCGTAGAAAACCTGGGCAATCTTCAATTGTGACTCAAAGAAAAGAATCAGATGAAGTAATATTTTTATCAGGTATATTTGATGGTTTTACTACAGGTACTCCTATTGGATTCATAATAAAAAATAAAGATCATAATTCAAAAGATTATTTTAATATAAAAAATATATATCGCCCATCTCATTCTGATTTTACATATTATAAAAAATATGTAATAAGAGATTATAGGGGAGGGGGGAGATCTTCTGCACGAGAAACAGTATCTCGTGTAGTTGCTGGTGCAATAGCTAAACAATTATTAAAAATTAATAATATTTTAATAAAAGCCTATGTTTCCTCTATAGGAGGATTAAATTTAAGTGAAAATTATAATAAACTTGATTTTTCTAAAATAGAAAATACACCTGTACGTTGTCCTGATCTACAATTAGCAGAAAAAATGATAAAATATATTAATAAATTACGTAAAAAAGGAGATACTATAGGTGGAATAATAACTTGTATTATACAAAATGTTCCTATTGGAATAGGTGAACCAGTTTTTGATAAACTTCATGCTGAATTAGGTAAAGCGATGCTGTCTATAAATGCTGTAAAAGGATTCGAATATGGTAGCGGATTTTATGGAACAAAAATTAAAGGATCTAATCATATTGATAAATATCAAAATAATGGAAGTACTAAAACAAATTTTTCTGGAGGAATTCAAGGTGGAATATCTAATGGGATGGATATTTATTTAAAGGTAGCTTTTAAAGCAGTAGCTACTATTAAAAAAAAAAGTATTAATTTTAATAAAAAAAAAATTTTTGTAAAAGGCCGTCATGATCCTTGTGTTTTACCTAGAGCCGTTCCTATTATAGAGGCTATGTCTGCATTAGTTTTATATGATTATATACATATGTATAAAATATTATTATTTTAAAAAAAAAAATTTATTATTATTGTATTGTAATAATAATATTTTTATTTTAAAAAAAAATTTATGGAAAAAGGCAAAATTAAAGTAACAGCAGAAGATATTTTTCCTGTTATTAAAAAATTTTTATATTCAGATCATGAAATCTTTATAAGGGAACTTGTTTCTAATGCAACTGACGCTATTTTAAAATTAAAAACTTTGATAAGTTTAGGAAAAGTTAATAAAAAAATTAATAATTTAATCATAGAAATTATCCTAAACAAGGAAAATAAAATTTTAAAAATTATAGATAATGGTATTGGAATGACTAAAAAAGAAGTATATAAATATATTAATAAAATTGCTTTTTCAGGTGCAGAAGCATTTTTAAAAAAATATAAAAATAAAAAATCTCTAATTGGTAATTTTGGATTAGGATTTTATTCATCTTTTATGGTTTCTGATAAAGTTGAAATAATATCTAAATCTTATAAAGATTCTGAATCTGCTATACATTGGATATGTGATGGATCTACTAATTTTTCTATTAAAAATATAGATACACCCACTAAATCAGGGACTGAAATTATACTTCATATTAATGATAGTTCTAAAGAATTCTTAGAAGAAAATAGAATAAAAGAATTATTAATTAAATATTGTAAATTTATGCCTATTCCTATAAAAATAGGAGAACGAGAAGAAATTAAAAAAAATAAAAATGGCCTTGAAAAAAAAATCAAAGTAAATAATATAATAAATAATACATCCCCTATATGGATAAAAAATCCAATAAATGGAAAAGATGAAGAATATATAAATTTTTATAAAGAACTTTATCCAATGCAAATTGAAAATCCTTTATTTTGGATCCATCTAAATATAGATCATCCTTTTAAACTTACTGGAGTACTTTTTTTTCCAAAAATAAGAAATCAAATAGAAATACAAAGAGATAAAATACAATTATATCAAAATCAAGTATATGTTACAGATAATTTAGAAGGGATAGTACCAGATTTTCTTAATTTTTTAAAAGGTGTAATTGATTCTCCAGATATTCCACTTAATGTATCTAGATCTTATCTTCAATCAGATTCATCTGTAAAAAAAATTTCAGGTTATATTACAAGAAAAGTAGCTGATAAGCTTGAAAATATGTGTAAAAATAATCGTGAAGATTTTGAAAAAAAATGGGAAGATATAAAAATAATTATAGAATATGGAATGATTAGCGACCCTAATTTTTATTCAAAAGCAAAAAAATTTGCTTTATATCCTGATATAAATAAAAAATATTTTATATTAGAAGAATATATAGAACATATTAAAAATACAAATAAATTAAAAAATAATAAAATTATTTGTTTTTATACTTCTAACCTAGAAAATCAAAATTATTATATACAAACAATTAAAAATAAAGGATATAAAATTTTATTATTAGATAGTCCTCTTGTTGGACATCTACTACAAAAAATAGAAATGGATTATAAAAATTTAAATTTTTATAGAGTAGATTCAGATAAGATAAATAAAATTTTAAAAAATGAAAAAAAAAATATTTCTAATCTTTCAGAAAATGAAATAATTTTTTTAAAAAAAATTTTAAATCAAAATATTGACAAAGAAAAATTTTTAATAAAAATAGAAGATTTAGATGATTCTTCATTACCATTTATTATAACTATTCCCGAATTTATTAGACGTATGAAAGAAATAAGTATGACTGGGAATAATATGTTTAATATTCAAAATTTTAATTCAAAATATAATATTATTGTTAATAAAAATCATAAATTTATAAAAAAAATAATAAATGAAAAAGATTTAAATATTCAAAAAAAGATTATTAAAAATTCATTAAATTTGATAATGTTATCACAAAATCTTTTAAAAGGTAAAGAATTAACAGATTTTATGTATCAAAGTTTTGAAAATTTTTAA

Protein sequences of DBSCAN-SWA_1

>NZ_AP013293|149373:159499|152824_155176_+|WP_041093875.1|DBSCAN-SWA
MLLHNIFIDSESVHILITEYLYILPVRNVVLFPGVVIPITAGRKKSIKLLKDAYSTDKIIGVLTQKYFNTENPKEQELYYIGTVAKILKLLKMPDGNTTVILQGKSRFKVIKMIQYYPYLTAEIIYLKDKKPGKQDKEYIALISSIKEIALKIIQDNTNIPSESSFAIRNIESKSFIINFVASNINLKIKKKQILLEYDFFKQRAIETFRFLNIEYKQIKLKNDIKYRVKTEMDQQQKEYFLNQQIKAIQEELGDFSYEKEVYELRIQSYKKKWSKKVQKQFDRELNKFQRTNTQMPEYTILRNYLDFMLDLPWKKYSQDNFDLNRAKKILDKDHFGIEKVKERIIEYLSVIKLKQDLRSPILCFYGPPGVGKTSLGKSIAYALNRKYIRMSLGGLNDEAEIRGHRKTYIGAMPGRILQSIKKAGTSNPVFVLDEIDKMGIGHQGNPSSAMLEVLDPEQNKEFYDNFLEIGYDLSKIIFIATANSLYPIHIAILDRMEIIDMNGYTVEEKIEICKKHLIPKQLKENGLKNNDLILGVKQIEKIIESYTRESGVRSLEKRISKIVRDAAKNIAMNKKYLKRINFSKIEEVLGPPNDPEKYEFTKIPGVVTGLAWTLVGGEILYIESTLFKGKGYFSITGNVGEVMKESATIALKYIKAHNYEFGIDDKMFELYNIHINVPEGGIPKDGPSAGITMLTSMISSFWKTSIRPYLAMTGEITLRGKVLPVGGIKEKILAAKRANIKEIILSKDNKKDVYDIKKVYLKGLKFHFVSKINEVINLSFYE
>NZ_AP013293|149373:159499|151305_152775_-|WP_041093873.1|tRNA|DBSCAN-SWA
MKKLTKRNENYSKWYNEIILRANIAEKSDVRGCMIIKPYGFYIWEKIKSILDNILKYTGHENVYFPLLIPKSYFSKEYNHIKGFAKECAIISHYRLKNYKNKNIIVDKSSKLEDELIVRPTSETIIWNSYKRWINSYRDLPILFNQWANIIRWERRTRLFLRTSEFLWQEGHTAHSTKKEAINQAKKILNIYTNVLENFMAIPVIQGIKTDSEKFAGAEKTYCIESIMQDGKSLQIATSHFLGQNFSKAFDVRYSTEKGNKEYVWATSWGISTRLIGAIIMTHSDDNGLILPPKIAPIQIVIIPVYKTQEQLNLIEKLVFPLKKFLEKIGINIKYDKRIYYTPGWKFNEYEIKGIPIRITIGKKDIDRGTVEVVRRDTLEKKYISINKLKFLIPKILSKIQDNILKVALKRKNNFLIEVDSYEEFIEKIKKNSGFLFAHWDGSSETETKIKVETNATIRCIPINLKKNMGKCIFSKNLSKQRVLFAKSY
>NZ_AP013293|149373:159499|156517_157576_+|WP_041093880.1|DBSCAN-SWA
MAGNIFGKLFRVTTFGESHGHALGGIIDGCPSGLKLNFEEINNELNRRKPGQSSIVTQRKESDEVIFLSGIFDGFTTGTPIGFIIKNKDHNSKDYFNIKNIYRPSHSDFTYYKKYVIRDYRGGGRSSARETVSRVVAGAIAKQLLKINNILIKAYVSSIGGLNLSENYNKLDFSKIENTPVRCPDLQLAEKMIKYINKLRKKGDTIGGIITCIIQNVPIGIGEPVFDKLHAELGKAMLSINAVKGFEYGSGFYGTKIKGSNHIDKYQNNGSTKTNFSGGIQGGISNGMDIYLKVAFKAVATIKKKSINFNKKKIFVKGRHDPCVLPRAVPIIEAMSALVLYDYIHMYKILLF
>NZ_AP013293|149373:159499|150715_151300_+|WP_041093871.1|DBSCAN-SWA
MYYFINTANLAKIKEAENLGILDGVNTNTSLIVKEGIIKKNDRYSHYKNICNIISGDLNADVISTDYNDIIKEGEFLSNLDKKIIVKVPLTRDGIKAIKYFSIKKIKTNCTLVFSTGQALLAAKAGANYISIFIGRLYNTNIIKEIKLIYDNYFFKTKILVTSIINTFHIISCAKIGIDIITAPLNEIKLLLNN
>NZ_AP013293|149373:159499|155168_156380_+|WP_041093878.1|DBSCAN-SWA
MNKNIYLHNITKKYGTPLYVYDANKIEYQYKLIKKSFSYIENLKINYACKANTNISILKFLKKLGSGLDTVSIQEIEIGLKAGFKPKEIIYTPNSVSLSEIKKAIKAGVIINIDNLSLLEQIGNDNTNYPIGIRINPHILGGGNKKISVGHIDSKFGISYYQLPHIKKIVENTGIKVEGIHMHTGSDILDIGVFLQGADILLNVASFFNELKYIDFGSGFKVPYKKNDTKTDIDMLGVSLKRKFLFFCEKYCKKLKLFFEPGKFLVSESGSFIVKVNVIKHTTSTVFAGVDSGFNHFIRPMFYDSYHHIDNISNPSGIFRFYTVVGYICESDTFCVNRKINEIREGDLLCFRNAGAYCFSMSSNYNSRYRPSEVIIYHKKYFLIRKRENMQDLLNNMIDIELS
>NZ_AP013293|149373:159499|149373_150684_+|WP_041093869.1|tRNA|DBSCAN-SWA
MFYKTYFIKYIKKKFNLKNKKIYVSVSSGLDSMVLLDVLMKICNIPICVIHCNFKLRGNDSDKDELFIQEFCLKNNIFFKSKKFNTINSNSHFSIQMMARKFRYDWFKYLLNNSYCDYIALGHNLDDSIETFFINIIRGTGIKGLIGIKNFNKKIIRPLYFFLKKEIISYANENNIKWREDISNYDHKYLRNRIRFFLKPILDYKFYNGFKKSIKYLYDEYVCSKKHISYLYKIITIEKKIYPFLVKIDIKKLLKLYPLSTYLFKIFYKYGFNNTKNLKKILNSKSGKKIFSKKYCLIKERTTLLLVENNINFIKKNYYIHNIDTIKIPFFIYFFLSERKKKKSYTSLDFDKLIFPLKLRNCKKGDRLNKIGMKGNKKLSKYFKEKKISIVDKTNIWVLINGDKKIICIIYERFECLDKNFKITNFTKKVLNLKKQ
>NZ_AP013293|149373:159499|157636_159499_+|WP_041093882.1|DBSCAN-SWA
MEKGKIKVTAEDIFPVIKKFLYSDHEIFIRELVSNATDAILKLKTLISLGKVNKKINNLIIEIILNKENKILKIIDNGIGMTKKEVYKYINKIAFSGAEAFLKKYKNKKSLIGNFGLGFYSSFMVSDKVEIISKSYKDSESAIHWICDGSTNFSIKNIDTPTKSGTEIILHINDSSKEFLEENRIKELLIKYCKFMPIPIKIGEREEIKKNKNGLEKKIKVNNIINNTSPIWIKNPINGKDEEYINFYKELYPMQIENPLFWIHLNIDHPFKLTGVLFFPKIRNQIEIQRDKIQLYQNQVYVTDNLEGIVPDFLNFLKGVIDSPDIPLNVSRSYLQSDSSVKKISGYITRKVADKLENMCKNNREDFEKKWEDIKIIIEYGMISDPNFYSKAKKFALYPDINKKYFILEEYIEHIKNTNKLKNNKIICFYTSNLENQNYYIQTIKNKGYKILLLDSPLVGHLLQKIEMDYKNLNFYRVDSDKINKILKNEKKNISNLSENEIIFLKKILNQNIDKEKFLIKIEDLDDSSLPFIITIPEFIRRMKEISMTGNNMFNIQNFNSKYNIIVNKNHKFIKKIINEKDLNIQKKIIKNSLNLIMLSQNLLKGKELTDFMYQSFENF

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_041093869.1|149373_150684_+|tRNA	tRNA lysidine(34) synthetase TilS	A0A2H4UTJ2	Bodo_saltans_virus	1.2e-11	32.1
WP_041093871.1|150715_151300_+	transaldolase	A0A1Z1LWE4	Synechococcus_phage	6.1e-24	35.3
WP_041093873.1|151305_152775_-|tRNA	proline--tRNA ligase	A0A1V0SJ28	Klosneuvirus	3.3e-90	36.8
WP_041093875.1|152824_155176_+	endopeptidase La	A0A0R6PGP8	Moraxella_phage	1.2e-142	39.0
WP_041093878.1|155168_156380_+	diaminopimelate decarboxylase	NA	NA	NA	NA
WP_041093880.1|156517_157576_+	chorismate synthase	A0A291AU41	Pandoravirus	3.7e-80	46.9
WP_041093882.1|157636_159499_+	molecular chaperone HtpG	A0A1V0SAD6	Catovirus	6.4e-51	26.2