CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP009709	Bacillus coagulans DSM 1 = ATCC 7050, complete genome	7 crisprs	DEDDh,csa3,cas3,DinG,c2c9_V-U4,cas14j,cas2,cas1,cas4,cas7,cas8c,cas5,RT,csf1gr8,csf2gr7,csf3gr5,cas6	3	13	15	1

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP009709_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009709_1

1041433-1041528

Orphan

Consensus_repeat	Method
TGCACGTTCGCCCATGCGCGTTAACTTGTTC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP009709_1

>merge|NZ_CP009709|1|1041433-1041528|CRISPRCasFinder
TGCACGTTCGCCCATGCGCGTTAACTTGTTCGGTCGAGGAGATCCTGCCCGAATTGTCGAAAGGATGCACGTTCGCCCATGTGCGTTAACTTGTTC

>NZ_CP009709|1|1|1041433-1041528|CRISPRCasFinder
TGCACGTTCGCCCATGCGCGTTAACTTGTTC	GGTCGAGGAGATCCTGCCCGAATTGTCGAAAGGA
TGCACGTTCGCCCATGTGCGTTAACTTGTTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009709.1\|WP_029141430.1\|1051362_1052910_-\|L-glutamate-gamma-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|179543
NZ_CP009709.1\|WP_029141427.1\|1043713_1044352_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP009709.1\|WP_029141426.1\|1041720_1043421_-\|septation-ring-formation-regulator-EzrA	unknown	unknown	gnl\|CDD\|377618
NZ_CP009709.1\|WP_029141425.1\|1041563_1041755_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009709.1\|WP_029141420.1\|1032277_1033279_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|223897
NZ_CP009709.1\|WP_019720719.1\|1034016_1034466_-\|sporulation-protein-YtfJ	unknown	unknown	gnl\|CDD\|131921
NZ_CP009709.1\|WP_029713757.1\|1034501_1035173_-\|DUF2953-domain-containing-protein	unknown	unknown	gnl\|CDD\|378578
NZ_CP009709.1\|WP_013859953.1\|1049196_1049871_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009709.1\|WP_019720717.1\|1035228_1035753_-\|RDD-family-protein	unknown	unknown	gnl\|CDD\|377640
NZ_CP009709.1\|WP_029141429.1\|1050351_1051347_-\|proline-dehydrogenase	unknown	unknown	gnl\|CDD\|223580
NZ_CP009709.1\|WP_029141428.1\|1045224_1047096_-\|diguanylate-cyclase	unknown	unknown	gnl\|CDD\|143635
NZ_CP009709.1\|WP_017553368.1\|1038895_1040104_-\|tRNA-4-thiouridine(8)-synthase-ThiI	unknown	unknown	gnl\|CDD\|234960
NZ_CP009709.1\|WP_013859944.1\|1038603_1038807_-\|small-acid-soluble-spore-protein	unknown	unknown	gnl\|CDD\|365990
NZ_CP009709.1\|WP_029141424.1\|1040100_1041255_-\|cysteine-desulfurase	unknown	unknown	gnl\|CDD\|224029
NZ_CP009709.1\|WP_029141423.1\|1036894_1038469_-\|acyl--CoA-ligase	unknown	unknown	gnl\|CDD\|341276
NZ_CP009709.1\|WP_013859951.1\|1047613_1048216_+\|30S-ribosomal-protein-S4	unknown	unknown	gnl\|CDD\|235411
NZ_CP009709.1\|WP_029141422.1\|1035764_1036781_-\|signal-peptide-peptidase-SppA	unknown	unknown	gnl\|CDD\|132934
NZ_CP009709.1\|WP_013859952.1\|1048403_1049180_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009709.1\|WP_019720720.1\|1033392_1033896_-\|thiol-peroxidase	unknown	unknown	gnl\|CDD\|179055
NZ_CP009709.1\|WP_013859949.1\|1044514_1044994_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224867

Protein	Function_ID	Function_description	E-value
NZ_CP009709.1\|WP_029141430.1\|1051362_1052910_-\|L-glutamate-gamma-semialdehyde-dehydrogenase	gnl\|CDD\|179543	PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehydrogenase; Provisional.	0
NZ_CP009709.1\|WP_029141427.1\|1043713_1044352_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	7.8983e-13
NZ_CP009709.1\|WP_029141426.1\|1041720_1043421_-\|septation-ring-formation-regulator-EzrA	gnl\|CDD\|377618	pfam06160, EzrA, Septation ring formation regulator, EzrA. During the bacterial cell cycle, the tubulin-like cell-division protein FtsZ polymerizes into a ring structure that establishes the location of the nascent division site. EzrA modulates the frequency and position of FtsZ ring formation.	3.82367e-178
NZ_CP009709.1\|WP_029141420.1\|1032277_1033279_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|223897	COG0827, COG0827, Adenine-specific DNA methylase [DNA replication, recombination, and repair].	3.43382e-40
NZ_CP009709.1\|WP_019720719.1\|1034016_1034466_-\|sporulation-protein-YtfJ	gnl\|CDD\|131921	TIGR02874, conserved_hypothetical_protein, sporulation protein YtfJ. Members of this protein family, exemplified by YtfJ of Bacillus subtilis, are encoded by bacterial genomes if and only if the species is capable of endospore formation. YtfJ was confirmed in spores of Bacillus subtilis; it appears to be expressed in the forespore under control of SigF (see ). [Cellular processes, Sporulation and germination].	1.38509e-55
NZ_CP009709.1\|WP_029713757.1\|1034501_1035173_-\|DUF2953-domain-containing-protein	gnl\|CDD\|378578	pfam11167, DUF2953, Protein of unknown function (DUF2953). This family of proteins has no known function.	2.12596e-12
NZ_CP009709.1\|WP_019720717.1\|1035228_1035753_-\|RDD-family-protein	gnl\|CDD\|377640	pfam06271, RDD, RDD family. This family of proteins contain three highly conserved amino acids: one arginine and two aspartates, hence the name of RDD family. This region contains two predicted transmembrane regions. The arginine occurs at the N-terminus of the first helix and the first aspartate occurs in the middle of this helix. The molecular function of this region is unknown. However this region may be involved in transport of an as yet unknown set of ligands (Bateman A pers. obs.).	4.45447e-20
NZ_CP009709.1\|WP_029141429.1\|1050351_1051347_-\|proline-dehydrogenase	gnl\|CDD\|223580	COG0506, PutA, Proline dehydrogenase [Amino acid transport and metabolism].	1.77411e-52
NZ_CP009709.1\|WP_029141428.1\|1045224_1047096_-\|diguanylate-cyclase	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	2.64216e-49
NZ_CP009709.1\|WP_017553368.1\|1038895_1040104_-\|tRNA-4-thiouridine(8)-synthase-ThiI	gnl\|CDD\|234960	PRK01565, PRK01565, thiamine biosynthesis protein ThiI; Provisional.	0
NZ_CP009709.1\|WP_013859944.1\|1038603_1038807_-\|small-acid-soluble-spore-protein	gnl\|CDD\|365990	pfam00269, SASP, Small, acid-soluble spore proteins, alpha/beta type.	1.0513e-23
NZ_CP009709.1\|WP_029141424.1\|1040100_1041255_-\|cysteine-desulfurase	gnl\|CDD\|224029	COG1104, NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism].	0
NZ_CP009709.1\|WP_029141423.1\|1036894_1038469_-\|acyl--CoA-ligase	gnl\|CDD\|341276	cd05972, MACS_like, Medium-chain acyl-CoA synthetase (MACS or ACSM). MACS catalyzes the two-step activation of medium chain fatty acids (containing 4-12 carbons). The carboxylate substrate first reacts with ATP to form an acyl-adenylate intermediate, which then reacts with CoA to produce an acyl-CoA ester. The acyl-CoA is a key intermediate in many important biosynthetic and catabolic processes.	0
NZ_CP009709.1\|WP_013859951.1\|1047613_1048216_+\|30S-ribosomal-protein-S4	gnl\|CDD\|235411	PRK05327, rpsD, 30S ribosomal protein S4; Validated.	4.34533e-132
NZ_CP009709.1\|WP_029141422.1\|1035764_1036781_-\|signal-peptide-peptidase-SppA	gnl\|CDD\|132934	cd07023, S49_Sppa_N_C, Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. This subfamily contains members with either a single domain (sometimes referred to as 36K type), such as sohB peptidase, protein C and archaeal signal peptide peptidase, or an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Site-directed mutagenesis and sequence analysis have shown these SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases. Interestingly, the single membrane spanning E. coli SppA carries out catalysis using a Ser-Lys dyad with the serine located in the conserved carboxy-terminal protease domain and the lysine in the non-conserved amino-terminal domain.	9.99468e-93
NZ_CP009709.1\|WP_019720720.1\|1033392_1033896_-\|thiol-peroxidase	gnl\|CDD\|179055	PRK00522, tpx, thiol peroxidase.	8.38532e-94
NZ_CP009709.1\|WP_013859949.1\|1044514_1044994_+\|hypothetical-protein	gnl\|CDD\|224867	COG1956, COG1956, GAF domain-containing protein [Signal transduction mechanisms].	4.07206e-81

>NZ_CP009709.1|WP_029141424.1|1040100_1041255_-|cysteine-desulfurase
MIYFDNSATTRPYPEVLDAFVKTSENYFANPSSLHSLGARTEKLLTQARRQIASLLGADENEIFFTSGGTEGNNLAIKGTALEYRSRGRHIITTAVEHASVFETCRQLEEWGFRVTYLPVDRSGRIKLDDLKQAITDETILVSVMHVNNEVGTVQPVEEIGRLLKTYPKILFHTDDVQGCGKVPLSLHDAGIDLCTVSAHKCHGLKGTGILYKRANLRLSPLLTGGHQERGLRSGTENTGGIVAAGKALRLVHEKFEAGAAERTARIRDALIEKLQEMPAVTVYTNPAVSAPHILNFSVRGIRGEVLVHALEEEGTYISTTSACSSKTRELSRTLLAMGVSEDEAEWAVRVSLSYENTMEEAERFIRILRQTITNLQEVLGRNQ
>NZ_CP009709.1|WP_017553368.1|1038895_1040104_-|tRNA-4-thiouridine(8)-synthase-ThiI
MNYDRILIRYGELSTKGHNRQFFIRHLKDNVKKALRPFGGIEVQALYDRMYVLLHGADGGQVIDILKSIFGIQSFSPAVRTRKQLEDIEQAGLELVRQNFAKGKTFKVSARRGDKTFEYDSNDLNHLVGGYILKQLDGIQVNVKQPDIELLVDVRKNGVYLSTEVIKGSGGLPVGASGKAMLMLSGGIDSPVAGYLAMKRGVKVEAVHFHSPPFTSPRAKQKALDLAQKISAYSGSMKVHIVPFTKIQETIHKGVPEGYSMTVQRRVMLEITDRLRKIHNGLAIVTGESLGQVASQTLDSMVAINDVTTTPVLRPLVSMDKLDIIDIAQKIGTYDISSLPYEDCCTIFTPPSPKTRPKLELARLYESRLELEPLIEEAVQNTEDVFITPNETAQEEDFSGLL
>NZ_CP009709.1|WP_013859944.1|1038603_1038807_-|small-acid-soluble-spore-protein
MAQSNNSNQLLVSGAEQALDQMKYEIAQEFGVNLGADTTSRANGSVGGEITKRLVSMAEQQLGGTSR
>NZ_CP009709.1|WP_029141423.1|1036894_1038469_-|acyl--CoA-ligase
MRRSDLIAPQTYNIAEEIEKYARDPHKVALIWEDKEGMHREVTYKELIENANRTGHVFLENGLKKGDIILVMVPRIVEAYEVYLAAMKCGIVLLPASEMLRTKDLDYRIEAGDVKGVVAHYSCTAQFKDVRGIENLKKFVIGEPEPGWAFLDEKKKAAPCELEIAKTSKDDIAILSYTSGTTGNPKGVIHTHSWGYAHLRTAAPNWLGIQEGDRVWATAAPGWQKWVWSPFLSVLGSGAIGFVYNGRFDPKKYLSLLDEYEINVLCCTPTEYRLMAKVDDLSHYHLKSLRSAVSAGEPLNREVMDVFQNHFGLTIRDGYGQTESTLLVGFSLDTPLRPGSMGKPFPGNEVEIVNDDGKPCKPGETGDIAVHRDTPALFKGYYKEPERTAKQYRGDYFITGDRARKDEDGYFWFEGRRDDIIISSGYTIGPFEVEDALVKHPYVKECAVVASPHEIRGSIVKAFVVLKDGISENLPGLVKELQNHVKQLTAPYKYPRAIEFIKELPKTASGKIRRVELRQQEWNR
>NZ_CP009709.1|WP_029141422.1|1035764_1036781_-|signal-peptide-peptidase-SppA
MNKKRWGALALAGGLFVVSIIVNLASMAASTNFSKIFKETVEAGEGDVSENVLQDGNESKKIVVLNVNGTIQDTGASPSLLDTGEYNHQSFLEELDEAKKDRDVKGIILHINSPGGGVAESAEIHHRLMEIKKDTKKKIYVSMGPTCASGAYYISTPADKIFASPETLTGSLGVIMESVNYGKLAKKYGIDFPVIKSGQYKDIMSPYRDMTKSEKEMMQKMVNNSYNGFVNVISKGRHIPKEEVRKIADGRVYDGRQALNLHLIDKYGYLDDTISAMKKDLHLGKAQVVEYETSGGLDSLFSASVQKMLGKEAEMTGLAHLLTQSNAPRPMYLYSGAE
>NZ_CP009709.1|WP_019720717.1|1035228_1035753_-|RDD-family-protein
MNSNENHIPETLTKAPEQISGSLSGARYAGFWIRFWAYLLDLLVVQSVKWLVIHPIFRLSGLSLTDEKIYSPITIASALVFYGYFVLMTKFFGQTLGKMVFGLRVVPLNHPGPLKWSTVLFREWIVRYVCVKIAVIYIVVAFTPKKQGVHDLFADTAVIHERSHEPVYPYYEPA
>NZ_CP009709.1|WP_029713757.1|1034501_1035173_-|DUF2953-domain-containing-protein
MEMIWWLSAFFALAAITAIVWFSSLSVLIEYGHRLDDDKIFIQIRVWGIICYTVKIPAVKVDRKKPGVVYEKETKHAEQERNITPDVLEQRIEDVKKIAERVIGLKAIAGKFIRNVQLRKFEWHTAIGLHDAAWTGIVAGSIWAVKGGILSLITTHLRVKTDPVLSVTPFFQYPISETQLKCMVKIQIGKAIIAAFKMLKYWRGGKAEIALTPVSEPENGRHA
>NZ_CP009709.1|WP_019720719.1|1034016_1034466_-|sporulation-protein-YtfJ
MGSHPIEGLMTAAMENLKEMIDVNTIIGDPVETPDGSVILTVSKVGFGFAAGGSQFNGPSGSGGSGESRPAELPFGGGSGGGVSIMPIAFLVVGAQGVKMLHLDQNTHLIEKIMDVAPGVVEKIQSMLKQNGQNGGQQPANQQKQDLDF
>NZ_CP009709.1|WP_019720720.1|1033392_1033896_-|thiol-peroxidase
MASVTFKGNPVTLEGTQVKVGDKAPDFTVLDNDLNEVTLSDTKGGVRIFSVVPSIDTGVCDAQTRRFNEEAAKLGKEVNVYTFSCDLPFAQKRWCAASGLDHVKVLSDHRDLSFGKAYGVVMKELRLLARAVFVVDSNDTVTYVEYVSEGTNHPDYEKALQAAKDAS
>NZ_CP009709.1|WP_029141420.1|1032277_1033279_-|class-I-SAM-dependent-methyltransferase
MSASPVETLFTVFNESAQILENRLSVPYLEAVAMTGENLFTGSIRQNGIDARDEKRLENIYGTVRLGDFTREQIRKAYQLAILKGMKANVQANHQMTPDSIGLLMSYFIGKFAEDTSAFSILDPAVGTGNLLLTILNQLSGKNITAYGVDIDDVLVRLAYTGANLLHHEIELFTQDALSQLFIDPVDIVVCDLPVGYYPNDAGAADYKLKADEGHSYAHHLFIEQSLRAARPGGFLFFLIPNGLFETKEAPKLRRFLKEEADIQAILQLPMTIFKNEQAAKSIFVIRKKAEGVKAPEQVLLASLPSLSNEGALRQLMAKMDAWCKENIQSGKI
>NZ_CP009709.1|WP_029141425.1|1041563_1041755_-|hypothetical-protein
MKKCWKLKNYFEANGKNTERSPFFFVCFFLRLSAGRQAFHAADAKQTHSFFGAWFFNLVNRHG
>NZ_CP009709.1|WP_029141426.1|1041720_1043421_-|septation-ring-formation-regulator-EzrA
MMYGIIGAILLLLVLLTCGFFIRRQFYKEIDKLEAWKIEIMNRPVTEELGKVKRLNMGGEAESLFEGWRKDWEDLLNEELPAVEDKLFEIEEHTDKYRFKKAKEVQAEAEAILQNAEQKIKDILDGVNELMDAEKESRKEVEELGKIFKDLKKQLLTRRHTYGKGIKSLDLRVDGLAEKFARYHELTEAGNYLEAKKLADELKAETETLQEDAGKIPDLLAETESLLPMQFRELKEGYKEMAAQGFALDHLQFDEEMKELTEKLSAYRKQLEQADTADVEEGIREIKERIETIYDILEKEAYAKNYVLKHFREVKDILDEVREENKRLKTETESVQKTYQLHEENMAVPAELEKQLEKLAARLAVLEVKIPENETIYSVLSEQLKEMEGQIEKLRDDQKTFNEFLQNLRKEEMEARAKIMGLKRTIQDMRRLVERSNIPGLPDSYRTLYEAAWNAIRDTAESLHATPLNMEKVNRHLLEAEQAVGNFEKSTKALMENVQLAEKVIQYGNRYRAKYKKVADGLERAEVAFRRYDYEKALEEAATTVEAVEPGALKKIEKMLETEELL
>NZ_CP009709.1|WP_029141427.1|1043713_1044352_-|TetR/AcrR-family-transcriptional-regulator
MDGNSSETKEKIFNTAIALFHTKGYKGTTIRAIAASAKVNSANISYYFNGKQGLLEACFIRFFEPYIACLEEEVQNLSEEGLKRAAFRILHFQSENHLLSRFVWREVTVDSQIVREILSTYFMKERYLLKKLAKAWCGPGIQAGKLNFLMIQLKSMLSMPYLNSQYIREVWGIQPEEPYFAEKYGKSVAEWLDSIRQNAGAQPEPLLLETAF
>NZ_CP009709.1|WP_013859949.1|1044514_1044994_+|hypothetical-protein
MFHAENAQGTKKEKYDLVVKQLIALTEGEPDKIANLSNATALLNQFLDRVNWVGFYFASGDELVLGPFQGLPACVRLPYGKGVCGTAWKEKRVLRVADVQQFSGHIACDAASQSEIVVPLMKNGEVVGVLDIDSPEKNRFDAEDEAGLAAFAAALEKVL
>NZ_CP009709.1|WP_029141428.1|1045224_1047096_-|diguanylate-cyclase
MEKKKENHLILYYKSRLLDLMNLEAASSLDDWVAVVADVLSADHIVYYKPDSENTKFYKICSFYNPFRHDVELVVPSGKIKALKTASQVVTNGKLKKDPYLKQFNIAFFIPEKNMEDGCLLLSIPNRLFGELSDADLQAFVRESRNFLQLKYELSVVEADRKRYIELFQVTGKFHSSMDTDTILAEIIYTLKRLYPVFDYTLMLSDDYHHNLDLPIKSLQYDAVDEMALESYVNGQVHLATVWRTNETMLYAPLRGKQGVYGVLQVITFTNYEFNRSDLEFISLLANTAGSALENAKLYQQSMQSIEELRLINSVSRQLNKSANLKETVDFLMKQISSSFDTQAIGFVMMENGKMDLLEGSSPIFEEKEGARYLEFANRSFAEKKESLFISNLNRRFPGRNYRFSSLMAVPIIQEDDLKGFCLVLHEAPYHFSFDRFKLFQSLIYQSGMALTNSMLRERLEKMVITDHLTQLFAKNYLNSRMETSIGEDEQGTLILLDIDDFKKVNDTYGHQTGDEILIQVAKLIKENIRSTDIGARWGGEEMAIYLPGVPLQTGVQVAKRVLAAVRKNTNPPVTISCGVSYWNKEMNETAESLFNRADAGLYHAKSLGKNQVVISDMEMKSN
>NZ_CP009709.1|WP_013859951.1|1047613_1048216_+|30S-ribosomal-protein-S4
MARYTGPSWKLSRRLGISLSGTGKELEKRPYAPGQHGPNQRRKLSEYGLQLQEKQKLRHMYGLNERQFHNTFLKAGKMQGKHGENFMVLLESRLDNLVYRLGLARTRRQARQLVNHGHILVDGKRVDIPSYRVEPGQTIGVREKSRNLDVIKEAIETTTFVPDYLSFDADKLEGTYSRLPERSELPAEINESLIVEFYSR
>NZ_CP009709.1|WP_013859952.1|1048403_1049180_-|hypothetical-protein
MTRPIFRHACTIFVMLPILLNGCSASHSGNQVKHEIQPNHTKAKENSQAASLSLDQMMMTEASKDEQQTPLDTVTHVVKWKFSDEKDVVPSKKNILWETHLGSEAVVATKVPKLKDSRLNLFALSFHDGKWGIKNVTDAPIDRLEDHVKGLTLPMQKYAVITSDFDGKSIWNITDGKRTVMIALYPQFSFSMPEGTKTIPFKGDEAFVNTRSKTQSLFYYFDQEKLIWIYGDLSESEIIKLANSLPSAGSPSFPEASS
>NZ_CP009709.1|WP_013859953.1|1049196_1049871_-|hypothetical-protein
MNRKIKICIFSFIAFVMTIVGYGGTSKALADDSESEVSAVYDIKNGDPIAVSKNQWDEYQEVQDWEDEPDVPSTYLKKAVDISERRACMGGWAYSATKQGYAFYKIVEGTHYLNRTKDNVTITSTFTGTHSKSSTASGKLGGGWKPVSAEVGYNADRTVSWSKSDSVKITVRPKYEGWNDYGTKRDKWYGTYYYLSNSCVQSKNVQLTVYIPKVKAVVAHTKHL
>NZ_CP009709.1|WP_029141429.1|1050351_1051347_-|proline-dehydrogenase
MANLTRDFFIGLSNSRFLNKSAQKWGFRFGAEKFVAGTDIDSVTRTIREMNARGISCTVDNLGEFVSEKAEAESAKQRILQMLDRIHEENLDCHISVKLTQLGLDIDRAFCLQNMEDILRRAAAYGIFINIDMEDYAHFHATIEVLKTLLESYQNVGTVIQAYLRNAEAVMDELKDVRLRIVKGAYKESETVAFQSKAEIDRNYVKLVKKRLLGEAYTSIATHDHYLIRELGAFIEENQIPHDRFEFQMLYGFRQEMQYELAKKYHFTTYMPFGNDWFGYYMRRLAERPQNVNLIVKDALYTKDNKLKKEPLLTAALTASLFMLWRRKRKR
>NZ_CP009709.1|WP_029141430.1|1051362_1052910_-|L-glutamate-gamma-semialdehyde-dehydrogenase
MVLPFKHEPLTDFNQPENVQAFQAALEKVRAELGKEYPLVINGERIFTEDKLVSVNPANKEQVVGKVSKASKELVDKAFEGANEAFRSWRKMAPEARANVLFKAAAIARRRKHELSAWLVFDAGKPWSQADGDTAEGIDFLEYYGRQMLELAKGQEMEQRENEHNTYFYQPMGPGVTIPPWNFAFAIVCGTTVAPLVAGNPVLLKPSESTPVIAYKLVEILEEAGVPKGVLQFVPGDPAEIGDYLVDHPSAHWINFTGSKATGLRIYERAAKVQKDQHFLKRVVAEMGGKDTIIVDKEADLDLAADAIVQSAFGFSGQKCSACSRAVVHEDVYEEVLEKAIALAKNVTVGDPSEENVYMGAVINEKQFNKIKSYIEIGKEEGKLVFGGETDGEKGFFVYPAIFKDVYPKARIMQEEIFGPVVAFAKGKDFDELLEIANNTEYGLTGAVISKNREHLERARYEFHVGNLYFNRGCTAAVVGYQPFGGFKMSGTDSKAGGPDYLKLFMEAKSVSEMF

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Crispr_ID: NZ_CP009709_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009709_2

1091292-1091449

Orphan

Consensus_repeat	Method
TTTAGGGCTGGCTTTTCATGCCGGCTCT	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP009709_2

>merge|NZ_CP009709|2|1091292-1091449|CRISPRCasFinder
TTTAGGGCTGGCTTTTCATGCCGGCTCTATGCGCACGGGTTTCTTAATTTAAACCCGGCTCTGTTCCGGATATCCCGGTTTAGGGCTGGTTTTTCATGCCGGCTCTGTACCGGACAGTAAGCAGAATCGGTTTAAGGGCGGGGGTTCATGCCGCCCTT

>NZ_CP009709|2|2|1091292-1091449|CRISPRCasFinder
TTTAGGGCTGGCTTTTCATGCCGGCTCT	ATGCGCACGGGTTTCTTAATTTAAACCCGGCTCTGTTCCGGATATCCCGG
TTTAGGGCTGGTTTTTCATGCCGGCTCT	GTACCGGACAGTAAGCAGAATCGG
TTTAAGGGCGGGGGTTCATGCCGCCCTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009709.1\|WP_029141447.1\|1082621_1083212_+\|YhcN/YlaJ-family-sporulation-lipoprotein	unknown	unknown	gnl\|CDD\|131944
NZ_CP009709.1\|WP_029141446.1\|1079622_1082448_-\|DNA-translocase-FtsK	unknown	unknown	gnl\|CDD\|224588
NZ_CP009709.1\|WP_029141448.1\|1086678_1087518_-\|protein-glutamate-O-methyltransferase-CheR	unknown	unknown	gnl\|CDD\|224271
NZ_CP009709.1\|WP_013859987.1\|1084825_1085140_-\|thioredoxin	unknown	unknown	gnl\|CDD\|239245
NZ_CP009709.1\|WP_029141453.1\|1093997_1094789_-\|phosphotransferase	unknown	unknown	gnl\|CDD\|223584
NZ_CP009709.1\|WP_013859986.1\|1083882_1084677_-\|DUF1444-domain-containing-protein	unknown	unknown	gnl\|CDD\|377802
NZ_CP009709.1\|WP_029713761.1\|1085283_1086423_+\|fused-response-regulator/phosphatase	unknown	unknown	gnl\|CDD\|369272
NZ_CP009709.1\|WP_019720680.1\|1090595_1090856_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009709.1\|WP_029141451.1\|1092411_1092735_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009709.1\|WP_017552524.1\|1095215_1096166_-\|NERD-domain-containing-protein	unknown	unknown	unknown
NZ_CP009709.1\|WP_080588421.1\|1093479_1093830_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|316669
NZ_CP009709.1\|WP_080588422.1\|1092734_1093427_-\|tRNA-(guanosine(46)-N7)-methyltransferase-TrmB	unknown	unknown	gnl\|CDD\|234649
NZ_CP009709.1\|WP_029141457.1\|1099728_1100097_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009709.1\|WP_013859992.1\|1090908_1091220_+\|propeptide-PepSY-amd-peptidase-M4	unknown	unknown	gnl\|CDD\|227871
NZ_CP009709.1\|WP_013859985.1\|1083263_1083869_-\|DUF4479-domain-containing-protein	unknown	unknown	gnl\|CDD\|234804
NZ_CP009709.1\|WP_029141456.1\|1098080_1099499_-\|dipeptidase-PepV	unknown	unknown	gnl\|CDD\|235988
NZ_CP009709.1\|WP_029141455.1\|1097114_1097984_-\|D-amino-acid-transaminase	unknown	unknown	gnl\|CDD\|130191
NZ_CP009709.1\|WP_029141454.1\|1096178_1096748_-\|RNA-2',3'-cyclic-phosphodiesterase	unknown	unknown	gnl\|CDD\|274058
NZ_CP009709.1\|WP_029141449.1\|1087762_1090528_-\|histidine-kinase	unknown	unknown	gnl\|CDD\|237951
NZ_CP009709.1\|WP_029141450.1\|1091579_1092434_-\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293814

Protein	Function_ID	Function_description	E-value
NZ_CP009709.1\|WP_029141447.1\|1082621_1083212_+\|YhcN/YlaJ-family-sporulation-lipoprotein	gnl\|CDD\|131944	TIGR02898, Uncharacterized_lipoprotein_YlaJ, sporulation lipoprotein, YhcN/YlaJ family. YhcN and YlaJ are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic 40-residue C-terminal domain that is not included in the seed alignment for this model. A portion of the low-complexity region between the lipoprotein signal sequence and the main conserved region of the protein family was also excised from the seed alignment. [Cellular processes, Sporulation and germination].	3.134e-29
NZ_CP009709.1\|WP_029141446.1\|1079622_1082448_-\|DNA-translocase-FtsK	gnl\|CDD\|224588	COG1674, FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell division and chromosome partitioning].	2.67393e-167
NZ_CP009709.1\|WP_029141448.1\|1086678_1087518_-\|protein-glutamate-O-methyltransferase-CheR	gnl\|CDD\|224271	COG1352, CheR, Methylase of chemotaxis methyl-accepting proteins [Cell motility and secretion / Signal transduction mechanisms].	2.28473e-72
NZ_CP009709.1\|WP_013859987.1\|1084825_1085140_-\|thioredoxin	gnl\|CDD\|239245	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox state of target proteins via the reversible oxidation of an active site dithiol, present in a CXXC motif, partially exposed at the protein's surface. TRX reduces protein disulfide bonds, resulting in a disulfide bond at its active site. Oxidized TRX is converted to the active form by TRX reductase, using reducing equivalents derived from either NADPH or ferredoxins. By altering their redox state, TRX regulates the functions of at least 30 target proteins, some of which are enzymes and transcription factors. It also plays an important role in the defense against oxidative stress by directly reducing hydrogen peroxide and certain radicals, and by serving as a reductant for peroxiredoxins. At least two major types of functional TRXs have been reported in most organisms; in eukaryotes, they are located in the cytoplasm and the mitochondria. Higher plants contain more types (at least 20 TRX genes have been detected in the genome of Arabidopsis thaliana), two of which (types f amd m) are located in the same compartment, the chloroplast. Also included in the alignment are TRX-like domains which show sequence homology to TRX but do not contain the redox active CXXC motif. Group II proteins, in addition to either a redox active TRX or a TRX-like domain, also contain additional domains, which may or may not possess homology to known proteins.	2.47737e-25
NZ_CP009709.1\|WP_029141453.1\|1093997_1094789_-\|phosphotransferase	gnl\|CDD\|223584	COG0510, ycfN, Thiamine kinase and related kinases [Coenzyme transport and metabolism].	5.95616e-66
NZ_CP009709.1\|WP_013859986.1\|1083882_1084677_-\|DUF1444-domain-containing-protein	gnl\|CDD\|377802	pfam07285, DUF1444, Protein of unknown function (DUF1444). This family contains several hypothetical bacterial proteins of unknown function that are approximately 250 residues long.	7.61241e-174
NZ_CP009709.1\|WP_029713761.1\|1085283_1086423_+\|fused-response-regulator/phosphatase	gnl\|CDD\|369272	pfam07228, SpoIIE, Stage II sporulation protein E (SpoIIE). This family contains a number of bacterial stage II sporulation E proteins (EC:3.1.3.16). These are required for formation of a normal polar septum during sporulation. The N-terminal region is hydrophobic and is expected to contain up to 12 membrane-spanning segments.	5.29326e-37
NZ_CP009709.1\|WP_080588421.1\|1093479_1093830_+\|hypothetical-protein	gnl\|CDD\|316669	pfam14165, YtzH, YtzH-like protein. The YtzH-like protein family includes the B. subtilis YtzH protein, which is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 90 amino acids in length. There is a conserved DIL sequence motif.	8.63804e-39
NZ_CP009709.1\|WP_080588422.1\|1092734_1093427_-\|tRNA-(guanosine(46)-N7)-methyltransferase-TrmB	gnl\|CDD\|234649	PRK00121, trmB, tRNA (guanine-N(7)-)-methyltransferase; Reviewed.	6.2055e-90
NZ_CP009709.1\|WP_013859992.1\|1090908_1091220_+\|propeptide-PepSY-amd-peptidase-M4	gnl\|CDD\|227871	COG5584, COG5584, Predicted small secreted protein [Function unknown].	7.72045e-31
NZ_CP009709.1\|WP_013859985.1\|1083263_1083869_-\|DUF4479-domain-containing-protein	gnl\|CDD\|234804	PRK00629, pheT, phenylalanyl-tRNA synthetase subunit beta; Reviewed.	5.39023e-53
NZ_CP009709.1\|WP_029141456.1\|1098080_1099499_-\|dipeptidase-PepV	gnl\|CDD\|235988	PRK07318, PRK07318, dipeptidase PepV; Reviewed.	0
NZ_CP009709.1\|WP_029141455.1\|1097114_1097984_-\|D-amino-acid-transaminase	gnl\|CDD\|130191	TIGR01121, D-alanine_aminotransferase, D-amino acid aminotransferase. This enzyme is a homodimer. The pyridoxal phosphate attachment site is the Lys at position 146 of the seed alignment, in the motif Cys-Asp-Ile-Lys-Ser-Leu-Asn. Specificity is broad for various D-amino acids, and differs among members of the family; the family is designated equivalog, but with this caveat attached. [Energy metabolism, Amino acids and amines].	1.25836e-142
NZ_CP009709.1\|WP_029141454.1\|1096178_1096748_-\|RNA-2',3'-cyclic-phosphodiesterase	gnl\|CDD\|274058	TIGR02258, UPF0097_protein_AF_2157, 2'-5' RNA ligase. This protein family consists of bacterial and archaeal proteins with two tandem copies of Pfam domain pfam02834. Members for which activity has been measured perform a reversible, ATP-independent 2'-5'-ligation of what is presumably a non-phyiological substrate: half-tRNA splice intermediates from an intron-containing yeast tRNA. The physiological substrate(s) in prokaryotes may include small 2'-5'-link-containing oligonucleotides, perhaps with regulatory or biosynthetic roles. [Transcription, RNA processing].	1.08614e-50
NZ_CP009709.1\|WP_029141449.1\|1087762_1090528_-\|histidine-kinase	gnl\|CDD\|237951	PRK15347, PRK15347, two component system sensor kinase.	2.87228e-73
NZ_CP009709.1\|WP_029141450.1\|1091579_1092434_-\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293814	cd07728, YtnP-like_MBL-fold, Bacillus subtilis YtnP and related proteins; MBL-fold metallo hydrolase domain. Bacillus subtilis YtnP inhibits the signaling pathway required for the streptomycin production and development of aerial mycelium in Streptomyces griseus. Members of this subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions.	1.16449e-175

>NZ_CP009709.1|WP_013859992.1|1090908_1091220_+|propeptide-PepSY-amd-peptidase-M4
MNWKTFIAGIAVGAAAGYAVNETLHHTVNVSAETVLAKVKKAFKENGPIDGSWIQMTAEDYEKYPFKTRVYKGGVSLTKDGEKKQYEFIADSKTGTVLDVYPI
>NZ_CP009709.1|WP_019720680.1|1090595_1090856_+|hypothetical-protein
MKLILYSRFSNILYHQFVANLLQNAVPRKTGRFSRDKSLWTLQRNVCVVKFFSKGRSVGAEKEATDLKKLVYSNFPIVIFLCFFSV
>NZ_CP009709.1|WP_029141449.1|1087762_1090528_-|histidine-kinase
MGFKKKQYAGFGVILAFMLVTAVVMLVSMNHMKKNMSEIVQDRYMKVKMATEIQLLFSQSDRELLAIINDEKASDTETAIQNITANRAKIESRLNQLDNILNHSQAKNILAKLQNEFASYTETEETIINDARHNKTVPSGVISDYQTKRSHLTAYITDFKKFQENLMSKAMKNASQLEKNLLQMIVVSSGLMIAVMLFIAYWIVSGTGKSLNNISKVMAHINYDDLTSLPRVDVKTEDEIGEIAAAFNRMAASLEQASQKEKNYIEQISERNWMQTTLAEMATMYQNITHINTLAERFIQKAVPVMAASMGAFYLKRGEKTKAEFVKIAAYAEDRGNPGRETFSYGEGLAGQCALEKESRVITDVPENYSLISTGLGEAKPRSILIAPVIYEEEVLAVLELASLEEFTPAELELIKQINHTLGMAINSVLSRMEVERLLKESQMMTEELQAQSEELQSQSEELQAQSEELQSQSEELRMINEQLEERTKEAEKRAHELEKTKQQLEEKAEQLIQSSQYKSEFLANMSHELRTPLNSILLLSEMLADESEEGNLTEEQKEFARVIHSSGSDLLNLINDILDLSKVEAGKMEMVIEEMNTRELPVYVGNQFAYLAEQKGLELKIDVDDHLPDLIYTDQRRFQQIVKNLLSNAVKFTENGSVTFRMRKVGAETAGKYVKTEGADFWLEVAVQDTGIGIPEKKQDLIFEAFQQGDGATGRKYGGTGLGLSICREFARLLGGTIRLDSTVGKGSTFILYIPSLPNGIAATEEVPAPESEAAPALLYEEDQQLGEEESAGRAFRNKTVLICDDDNRNIYALKKALSKEGMKVLVSQNGFECLDMLGLHKEVDIVLMDIMMPGMDGYETMQKIRANENFSDLPIIALTAKAMKGDRQKCLDAGATDYISKPLKMDQLLSVMRVWLPQE
>NZ_CP009709.1|WP_029141448.1|1086678_1087518_-|protein-glutamate-O-methyltransferase-CheR
MKKNQLTDDDIRKLEMDMLLFAIYRISGYDFRQYARSSIERRVTHRMRLENLPSISALIERVIHEPEFLEVLLNDLSIQVTEMFRDPDFFAAFREKVVPELRQYPEIRIWHAGCSSGEEAYSMAILLDEEGLREKTRIYATDMNERVLRQAESGAFSLHKMQTYTKNYFQAGGKREFSYYYTADAQHAYFNKSLADNIVFAQHNLVTDGSFNEFHAIICRNVMIYFDQNLQKKVLRLFDESLTNRGFLGLGHKETVLTIDTEGKYEVFDRDEKIYRKKA
>NZ_CP009709.1|WP_029713761.1|1085283_1086423_+|fused-response-regulator/phosphatase
MTILIVDDHKVNLFVIEKILKNAGYDQYISFTSAKELFAYLHLGEEHAPKSPADCILMDIMMPEIDGIEACRMLQQSPRFRDIPVIFLTALDDARKLAEALNAGGIDYITKPINKVELIARLKVALRLKEEKDWHTEQEKHLKDELDLAMQVQRTLLSEPIKENCLSITSSYKPAHQLAGDLYYWYKIDDHRYSLMLLDVMGHGISASLVCMFISSKLRDLMQSKADPETVMQELNELMRYLNKDGGMQHYFTAIYLVLDCAGKTVEYVNAGHPPAFALVDEKEVVPLSEGGCAVGFFPQLEVEKQVLRYHESLQLLLFTDGVMEALDSDSRDGLNILQQLASSAWSPEKAAAPLDAVLAKELQEQQLDDMCVVLVQAN
>NZ_CP009709.1|WP_013859987.1|1084825_1085140_-|thioredoxin
MQELQSMEDFKNLKENGAHIFLFSADWCPDCRFLDPFMPEIEEAYSDYTFVHVDRDKFLDLCADLDVYGIPSFVAFRDGKEIGRFVSKDRKTKEEVEKFIESLA
>NZ_CP009709.1|WP_013859986.1|1083882_1084677_-|DUF1444-domain-containing-protein
MDTKQLRRELEKRLEKKGRIFSYDREKDILRVENEDTHQGLNISLPEIAAKWVSQKEEAIEEVVYYAEEALGVMGKNHSLHGREKSIFPVIRSTSFPAEAPGGIPFLTDAHTAETRIYYALDLGNTYRLIDFQMLEREGWSPEHVRETARFNLRSLSTKMKKDTVAGNDFYFLNTNDGYDASRILNEKFLQEMSVKTEGEMVLAVPHQDVFIIGDIRNATGYDIIAQMAMNFFANGHVPITALSFLYQDGELEPVFILGKNRKS
>NZ_CP009709.1|WP_013859985.1|1083263_1083869_-|DUF4479-domain-containing-protein
MNVFYNREGIGDTLIVMIKEAEHAAYEKRGTVARIYDEKTKETAGFNIFEASRYGGFEGSGPVKLTEALLDKLNGILAENGFNEKLDADLSPKFVVGYVKEKEKHPDSDHLSICQVDTGTETLQIVCGAPNVEAGQKVVVAKTGAVMPNGMIIKDAVLRGVASSGMICSARELGLPNAPQKKGILVLDGQYKVGSEFPLPK
>NZ_CP009709.1|WP_029141447.1|1082621_1083212_+|YhcN/YlaJ-family-sporulation-lipoprotein
MKIAKALLGIGLASGLLMGCGNNNGAGDNNGNRNNARPVRYNDTADNNDVRYNNVRYNTGRTDGNNGADLTNNNGNGNNNNNNNDVRVANRIARSIEDLKEVAQAFVIVTNDNAYVAVLLERNQNNDKLDKKLKNKISKVVKQTDPSINDVYISENPDFFDQMSDYVNDIRNGRPISGFFNQFNDTIQRVFPNGSR
>NZ_CP009709.1|WP_029141446.1|1079622_1082448_-|DNA-translocase-FtsK
MNLSWIKKMAKYFKDENVHEEARDPAGLYQARPENIDTRVAYHYPKKQFRFPVIPDQEGERRKTTEKPEKQQPRAKKHRPDPRPERGEKVQKGHPFRPTDIPSPVFGFKRPANDLPSQEETTVLEYELEDHYKKDIHLFDMAKLQQLLDFAENPGTDGEGNPAEPEHGIQMADHWFEEEQTDLPADQAGRTTADQAEKGESVQTETGHGEDSPGAADEAAGTPESETAYRLEVPGTIPSNESEQPKVKTSESGPASALPKEDAAAISSEESGANPADEAEKETMASYPASEPAKGKAEETPASALENMEPEQYSIGTPESGAADGLEKTGISLADEPETGKASLASDPGKVESEADPANRPETGKAAAVSPKASMADLANEPEKVSSIYALEKAEKNAGNEPEQRHTETAGISPSSGEATKTEGRPRKHLPFNVLMLKQDRRKITEKKEAPVPRPEQENPAENSREKPFSFPPLSLLEPPVKQTRDEGWIQEQSYTLDEALENFNVRAKVVNASQGPSVTRFEVQPEPGVKVNKITNLNDDLKLSLAAKDIRIEAPIPGKHTVGIEIPNLKSRPVRLREIIGDPVFQNSKSPLTVAMGLDISGKPVVTDLQKMPHGLIAGATGSGKSVCINSVLVSLLYKAAPQDLKLLLIDPKMVELAPYNQIPHLVSPVITDVKMATAALKWAVEEMERRYELFAHESVRDIHRYNEMAARTRRFSEKLPYIVIVIDELADLMMTSPGDVEDAICRIAQKARACGIHLILATQRPSVDVITGLIKANIPTRIAFSVSSQVDSRTIIDMSGAEKLLGKGDMLFLENGTSKPVRLQGTFVSDREIDDVVSYVREAATPEYLFQPEELLRQTEPGEEEDELFPDACEFVIHQGGASTSLLQRNFRIGYNRAARLIDMMEQQGIISGAKGSKPRDVLITKSELMQMQEAESRE
>NZ_CP009709.1|WP_029141450.1|1091579_1092434_-|MBL-fold-metallo-hydrolase
MEHLTVGEMTLYWLDGGVTHLDGGAMFGVVPKPLWSRKYPYNEKNQIELRTDPIFFQLNGKNILIESGIGNGKLTDKQKRNYGVTEESQIERALSAFGLTRENIDIVLMTHLHFDHACGLTMPDDTKGYVPSFPNAAIYVSETEWDEMRHPNIRSKSTYWKENWEAIQHQVQTFKEEVTIEGKVRMVHTGGHSDGHAIVMAESGGEKWIHMADLLPTHAHRNPLWVMAYDDYPMTSIFQKQKWIEEAIRDNAWFVFYHDAVYRALKWDTDGNMAEKVEREKTPV
>NZ_CP009709.1|WP_029141451.1|1092411_1092735_-|hypothetical-protein
MAVRRALFFASRQGKTQRYFQFFARGTGWENAMAFSVFCTVQQAGVNATAFSVFGITELAGKNHKGKASREHCLFSSRHRQENGKWQRILLNEIDYRREKNGTFNSR
>NZ_CP009709.1|WP_080588422.1|1092734_1093427_-|tRNA-(guanosine(46)-N7)-methyltransferase-TrmB
MPKNISWGVFMRLRNKPWAEEKLKKYPQFVVPDPEKWRGHWQALFGNGNPLHIEIGTGKGRFISEMAEQHPEINFLGIEKQPSVIVSALDKLIEKNSPNVKLLNADGARLREFFAKGDVGRIYLNFSDPWPKNRHEKRRLTYRTFLQLYEDILADGGEIHLKTDNQGLFEYSLQSFSEYGLLLKNISLDLHRSDFSGNVMTEYEEKFSAQGQRIYRCEAKYRNAPGALQG
>NZ_CP009709.1|WP_080588421.1|1093479_1093830_+|hypothetical-protein
MEAPAQDLHAHVNSCISQVKDVFHLALSHRDQLTLLMDILYDHQTECCGSVSECEQLERLVKSLLVNPAVANDMKQTLTDVYSYSQAGKYAQHLDDHIEAHQNKLEEWVDQLNTYF
>NZ_CP009709.1|WP_029141453.1|1093997_1094789_-|phosphotransferase
MLEDILGKGWEIMPAGGATGEAFYAKYQEQSLFLKRNSSPFLAVLSAEGIVPKLVWTKRLENGDTITAQQWVEGRELKPYEMEEERVARMLKKIHDSKPLLTMLQRLGLESMEPESMLHDLKSGAKGEWPDTPGVLDALEFLKREQPNVAYGDCVVCHGDINHNNWLLSNENELFLIDWDGPLIGDPAMDIGMLLYAYIPPENWGRWLRQYGTEMTESLALRMKWHTIYQAIVMICWHKEKGRYEEMQHWLDFLQSVHGGVKK
>NZ_CP009709.1|WP_017552524.1|1095215_1096166_-|NERD-domain-containing-protein
MGQLLKMQDFVSRYETDLIRYTNQFIRLKKQQWEKFRENWENGPEEEEEAPAPEESRQVLSRMKHWLKRKDTAETEEQAAPVSPAPPGELDFAPQLAFLPETEDQLKKLFLDQLFRFQLKWASSTLLQQSEIPAVLYFDPDLKYFLQRFPDTFLLMYRPVLSFKKAVLEMEHLLISPMAVWCIAFVEKEKDAVFFGSNGRFWKKRTARNEEKILNPAIALARTEKIVRSILKRHDITFPVERALICRNGFIQWPDAPDGLHILDKRPHAEWFRHQRNLRSPFKYMQLKAAQVLLNECLATNTSSGNSGAARGGGGE
>NZ_CP009709.1|WP_029141454.1|1096178_1096748_-|RNA-2',3'-cyclic-phosphodiesterase
MANHYFYAVMLPEALKQKLQQATAGMKSSLPFQRWVHRDDAHITLAFLGAAEEAQLEKANRLIADKISTFRVLPLVFDHFGTFGKKEQPRVLWAGIQESQPLFDLERMVAGCCLEAGFSLDRRPFHPHITLARKWGGDRPFAAGMLDRYLPEPVPFSADRIVLYRTNLHKTPKYEIVQSFRLADAQNLK
>NZ_CP009709.1|WP_029141455.1|1097114_1097984_-|D-amino-acid-transaminase
MEKLVLNGTLVDRGEASVDIEDRGYQFGDGIYEVVRVYGGRLFTSEMHLKRLYSSAEKLSLHIPYTMKQLTAQLEALVAANQLHTGIVYLQFTRGVAKRKHHFPETSETTFVAYTSEMERPLEKMRKGVKAVLAEDIRWLRCDIKSLNLLGNVLAKQKAAENGAYEAIQHRGETVTEGSSSNVFIVKDGVLLTHPATNLILNGITRQVVFGICGKEGIPFREEPFTVEDLCTADEVLITSTTSEVMPVVDIDGKPVAGGTPGTVTLKLQHAFDREIHALSAQAVPGAPN
>NZ_CP009709.1|WP_029141456.1|1098080_1099499_-|dipeptidase-PepV
MADIHWMEEVLKRKEDLIRDLKGILQIRSVLDEANATEEAPLGQGVREALQYMLDLGEKDGFKTKNVQNLAGHLEMGEGEDILGILGHVDVVPEGDGWTVDPYSGTVKDGKIYARGSSDDKGPTMAAYYGMKIVKELGVPLEKRVRLIVGTDEESNWRCMDAYFANEEMPAIGFSPDADFPIIYAEKGIADFDIIQDPEKTEDPQQAELLSFESGRRYNMVPDYAEARLVAHGEQTELLQKFQDYQKETGLAGQDFVDGGVLILKLEGVSAHGAEPENGKNAGLYLAKFLNSVALDRAGAKFIKTLNQFFGRSRGEYFGIGYKDEVSGELTINIGIMSYHQEKGGRIGLNMRYPVTFDLEAGKTKIVSKLKKDGLRFDHFSDQKPHYVDKNDPLITTLAKVYEEQTGEEAKLLAIGGGTYARTLKKGVAFGALFPGREDVMHQKDEYMYVEDLLKATAIYAQSIYELGGKHA
>NZ_CP009709.1|WP_029141457.1|1099728_1100097_+|hypothetical-protein
MSFITAMKDKTWCLDCRNVLHWRGKIKIPANPTCPIGTGAQIDKIASHYTPIVPLARLIRKANSKMSFIGLAKAIPLAGLQQPREKGGEKNAIISGYKLSRHNIWCKQELIYLSIQAKRCTI

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Crispr_ID: NZ_CP009709_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009709_3

1138342-1138442

TypeV

Consensus_repeat	Method
GCGGGTGATGGGAATCGAACCCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP009709_3

>merge|NZ_CP009709|3|1138342-1138442|CRISPRCasFinder
GCGGGTGATGGGAATCGAACCCACGACAACAGCTTGGAAGGCTGTGGTTTTACCACTAAACTACACCCGCATCAAAGGGCGGATGATGGGAATCGAACCCA

>NZ_CP009709|3|3|1138342-1138442|CRISPRCasFinder
GCGGGTGATGGGAATCGAACCCA	CGACAACAGCTTGGAAGGCTGTGGTTTTACCACTAAACTACACCCGCATCAAAGG
GCGGATGATGGGAATCGAACCCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009709.1\|WP_073193867.1\|1128557_1128716_+\|DUF1540-domain-containing-protein	unknown	unknown	gnl\|CDD\|377869
NZ_CP009709.1\|WP_029142606.1\|1133583_1135329_-\|2-succinyl-5-enolpyruvyl-6-hydroxy-3--cyclohexene-1-carboxylic-acid-synthase	unknown	unknown	gnl\|CDD\|236020
NZ_CP009709.1\|WP_013860039.1\|1131924_1132743_-\|1,4-dihydroxy-2-naphthoyl-CoA-synthase	unknown	unknown	gnl\|CDD\|180958
NZ_CP009709.1\|WP_019720646.1\|1132783_1133587_-\|2-succinyl-6-hydroxy-2,-4-cyclohexadiene-1-carboxylate-synthase	unknown	unknown	gnl\|CDD\|274729
NZ_CP009709.1\|WP_029142607.1\|1127606_1128497_+\|adhesin	unknown	unknown	gnl\|CDD\|238499
NZ_CP009709.1\|WP_080588425.1\|1151466_1152591_-\|DUF1646-domain-containing-protein	unknown	unknown	gnl\|CDD\|285138
NZ_CP009709.1\|WP_029142729.1\|1150641_1151331_+\|MgtC/SapB-transporter	unknown	unknown	gnl\|CDD\|224204
NZ_CP009709.1\|WP_013860038.1\|1130081_1131536_-\|o-succinylbenzoate--CoA-ligase	unknown	unknown	gnl\|CDD\|235146
NZ_CP009709.1\|WP_014097633.1\|1146534_1146741_+\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|224393
NZ_CP009709.1\|WP_013860037.1\|1128981_1130085_-\|o-succinylbenzoate-synthase	unknown	unknown	gnl\|CDD\|239433
NZ_CP009709.1\|WP_029142605.1\|1135330_1136662_-\|isochorismate-synthase	unknown	unknown	gnl\|CDD\|224091
NZ_CP009709.1\|WP_017554000.1\|1127008_1127245_+\|membrane-protein-insertion-efficiency-factor-YidD	unknown	unknown	gnl\|CDD\|178815
NZ_CP009709.1\|WP_029142727.1\|1153707_1156119_-\|copper-translocating-P-type-ATPase	unknown	unknown	gnl\|CDD\|319783
NZ_CP009709.1\|WP_019720644.1\|1136927_1137851_+\|1,4-dihydroxy-2-naphthoate-polyprenyltransferase	unknown	unknown	gnl\|CDD\|235695
NZ_CP009709.1\|WP_029142726.1\|1156212_1156419_-\|copper-resistance-protein-CopZ	unknown	unknown	gnl\|CDD\|188014
NZ_CP009709.1\|WP_013860044.1\|1147636_1148800_+\|glycosyltransferase-family-1-protein	unknown	unknown	gnl\|CDD\|340831
NZ_CP009709.1\|WP_017551355.1\|1145139_1145484_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009709.1\|WP_013860045.1\|1149123_1149303_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009709.1\|WP_029142730.1\|1149644_1150550_-\|EamA/RhaT-family-transporter	unknown	unknown	gnl\|CDD\|223769
NZ_CP009709.1\|WP_014097632.1\|1146741_1147113_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP009709.1\|WP_073193867.1\|1128557_1128716_+\|DUF1540-domain-containing-protein	gnl\|CDD\|377869	pfam07561, DUF1540, Domain of Unknown Function (DUF1540). This family has four conserved cysteines, which is suggestive of a metal binding function.	5.34096e-10
NZ_CP009709.1\|WP_029142606.1\|1133583_1135329_-\|2-succinyl-5-enolpyruvyl-6-hydroxy-3--cyclohexene-1-carboxylic-acid-synthase	gnl\|CDD\|236020	PRK07449, PRK07449, 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase; Validated.	0
NZ_CP009709.1\|WP_013860039.1\|1131924_1132743_-\|1,4-dihydroxy-2-naphthoyl-CoA-synthase	gnl\|CDD\|180958	PRK07396, PRK07396, dihydroxynaphthoic acid synthetase; Validated.	0
NZ_CP009709.1\|WP_019720646.1\|1132783_1133587_-\|2-succinyl-6-hydroxy-2,-4-cyclohexadiene-1-carboxylate-synthase	gnl\|CDD\|274729	TIGR03695, menH_SHCHC, 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase. [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone].	1.12772e-120
NZ_CP009709.1\|WP_029142607.1\|1127606_1128497_+\|adhesin	gnl\|CDD\|238499	cd01017, AdcA, Metal binding protein AdcA. These proteins have been shown to function in the ABC uptake of Zn2+ and Mn2+ and in competence for genetic transformation and adhesion. The AdcA proteins belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and they bind their ligand in the cleft between these domains. In addition, many of these proteins have a low complexity region containing metal binding histidine-rich motif (repetitive HDH sequence).	5.34173e-97
NZ_CP009709.1\|WP_080588425.1\|1151466_1152591_-\|DUF1646-domain-containing-protein	gnl\|CDD\|285138	pfam07854, DUF1646, Protein of unknown function (DUF1646). Some of the members of this family are hypothetical bacterial and archaeal proteins, but others are annotated as being cation transporters expressed by the archaebacterium Methanosarcina mazei.	9.34183e-108
NZ_CP009709.1\|WP_029142729.1\|1150641_1151331_+\|MgtC/SapB-transporter	gnl\|CDD\|224204	COG1285, SapB, Uncharacterized membrane protein [Function unknown].	5.4375e-50
NZ_CP009709.1\|WP_013860038.1\|1130081_1131536_-\|o-succinylbenzoate--CoA-ligase	gnl\|CDD\|235146	PRK03640, PRK03640, o-succinylbenzoate--CoA ligase.	0
NZ_CP009709.1\|WP_014097633.1\|1146534_1146741_+\|transcriptional-regulator	gnl\|CDD\|224393	COG1476, COG1476, Predicted transcriptional regulators [Transcription].	1.09584e-26
NZ_CP009709.1\|WP_013860037.1\|1128981_1130085_-\|o-succinylbenzoate-synthase	gnl\|CDD\|239433	cd03317, NAAAR, N-acylamino acid racemase (NAAAR), an octameric enzyme that catalyzes the racemization of N-acylamino acids. NAAARs act on a broad range of N-acylamino acids rather than amino acids. Enantiopure amino acids are of industrial interest as chiral building blocks for antibiotics, herbicides, and drugs. NAAAR is a member of the enolase superfamily, characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion.	0
NZ_CP009709.1\|WP_029142605.1\|1135330_1136662_-\|isochorismate-synthase	gnl\|CDD\|224091	COG1169, MenF, Isochorismate synthase [Coenzyme metabolism / Secondary metabolites biosynthesis, transport, and catabolism].	3.17665e-131
NZ_CP009709.1\|WP_017554000.1\|1127008_1127245_+\|membrane-protein-insertion-efficiency-factor-YidD	gnl\|CDD\|178815	PRK00041, PRK00041, hypothetical protein; Validated.	5.61734e-41
NZ_CP009709.1\|WP_029142727.1\|1153707_1156119_-\|copper-translocating-P-type-ATPase	gnl\|CDD\|319783	cd02094, P-type_ATPase_Cu-like, P-type heavy metal-transporting ATPase, similar to human copper-transporting ATPases, ATP7A and ATP7B. The mammalian copper-transporting P-type ATPases, ATP7A and ATP7B are key molecules required for the regulation and maintenance of copper homeostasis. Menkes and Wilson diseases are caused by mutation in ATP7A and ATP7B respectively. This subfamily includes other copper-transporting ATPases such as: Bacillus subtilis CopA , Archeaoglobus fulgidus CopA, and Saccharomyces cerevisiae Ccc2p. This subclass of P-type ATPase is also referred to as CPx-type ATPases because their amino acid sequences contain a characteristic CPC or CPH motif associated with a stretch of hydrophobic amino acids and N-terminal ion-binding sequences. This subfamily belongs to the P-type ATPases, a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	0
NZ_CP009709.1\|WP_019720644.1\|1136927_1137851_+\|1,4-dihydroxy-2-naphthoate-polyprenyltransferase	gnl\|CDD\|235695	PRK06080, PRK06080, 1,4-dihydroxy-2-naphthoate octaprenyltransferase; Validated.	6.0167e-126
NZ_CP009709.1\|WP_029142726.1\|1156212_1156419_-\|copper-resistance-protein-CopZ	gnl\|CDD\|188014	TIGR00003, COP-associated_protein, copper ion binding protein. This model describes an apparently copper-specific subfamily of the metal-binding domain HMA (pfam00403). Closely related sequences outside this model include mercury resistance proteins and repeated domains of eukaryotic eukaryotic copper transport proteins. Members of this family are strictly prokaryotic. The model identifies both small proteins consisting of just this domain and N-terminal regions of cation (probably copper) transporting ATPases. [Transport and binding proteins, Cations and iron carrying compounds].	3.33809e-18
NZ_CP009709.1\|WP_013860044.1\|1147636_1148800_+\|glycosyltransferase-family-1-protein	gnl\|CDD\|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	2.06596e-14
NZ_CP009709.1\|WP_029142730.1\|1149644_1150550_-\|EamA/RhaT-family-transporter	gnl\|CDD\|223769	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only].	4.08066e-13

>NZ_CP009709.1|WP_019720644.1|1136927_1137851_+|1,4-dihydroxy-2-naphthoate-polyprenyltransferase
MNAQSSPAIGPDKGWRIWWQLTRPHTLTAGFVPVILGTVLALGIARINLLLFAAMLVATLLIQAATNMFNEYYDYKRGLDTEHSVGIGGAIVRNGIKPKTVLHLAFAFFGAAMLIGVYICSQSSWWIAVIGSVCMLVAYLYTAGPFPISSTPLGELISGFFMGVIIILISFFIQTKTITWPIVFVSIPIMILIGAIMLSNNIRDLDGDKANGRKTIAILLGRKGAILLLAVMFALSYLWMAGLVLFGVVTPWVLLVFVSTPKPVRAIKGFIGKSEPLQMLPAMKATAQTNTIFGLLLSISFLIDHFI
>NZ_CP009709.1|WP_029142605.1|1135330_1136662_-|isochorismate-synthase
MKEKTAPALKLVSKVIKCRTAPDPLRLFTAGAARFYGSRFFWQDKNRETVFVGFGRVWSCTVTASDGFAQMEDEWRNLKGAGEVYPETAETGTGPVLFGGFAFDGTVAKQEWKTFGQGIFRVPQILFTFKKDAVFLTVNGCGGTESVQEAEKTARSLLNGSTAFPALPPLKAVQEMGADEWKKSVATAVQFIREGRMDKVVLARKLELAFDGVTSPDAVLAALSAQQNDSYLFVLEEGSESFIGASPERLVKKTGRHILSTCLAGSIKRGRNEAEDLELGKALLSDQKNLSEHGFVVSMIRQVLEPFCNGLNVPGAPVLMRMRDIQHLYTPVTGTVKDKNTTLFQLVKALHPTPALGGIPRQPAMEAIRLLEKMDRGLYGAPIGWVDYRGSGEFCVGIRSGLLKGDHASLYAGCGVVKESEPEEEYKETSVKFTPMLRALGGK
>NZ_CP009709.1|WP_029142606.1|1133583_1135329_-|2-succinyl-5-enolpyruvyl-6-hydroxy-3--cyclohexene-1-carboxylic-acid-synthase
MEHQEIMTTYLAAFIRQLSAMGIRYAVVSPGSRSTPIAMLLAEHPDFQIYMDIDERSAAFFALGLAKEKRKPVVLLCTSGTAAANYYPAVAEANISRVPLIVLTADRPHELRNVGAPQAIDQIRLYGTHVKWFEEMPLPEAGEEVLQFVRQTAARAVVTSLQQPAGPVHLNFPLREPLVPVLKPSPFASEVPVAAIENFSGTLQLSEETVEIAAKEIREKDRGLIICGPMDIPGFAEAVVALSEKTGYPVLADPLSQLRSGRHGKERIIENYDSLLKDPKWSGRLAPDVVIRFGAMPVSKPLTLLLKKVKTAAHYIVDGGNGWRDPVKRGTTVVYSDEIEFCKKLSNAIVMNPFSEWFAMWRKLNQQARQIVTASLEAEETFDEGKTVTELAAALPDGSTLFVGNSMPIRDVDTFFQATDKKIRILANRGANGIDGVVSSAAGVSAGCGKAFLLIGDLSFFHDLNGLLMTKMHKLNLCVILINNNGGGIFSFLPQADEPEKFEQLFGTPTDLAFEYAVKMYGGSYVQPQNWDQFRAALFAYKGGLQVIEVRTNRAKNVESHRKIWLQVSREMERYFQGEQQ
>NZ_CP009709.1|WP_019720646.1|1132783_1133587_-|2-succinyl-6-hydroxy-2,-4-cyclohexadiene-1-carboxylate-synthase
MRINGLEYHVETAGDKEPLLLLHGFTGNGNTWNDTVAMLRDEFRCIVVDIIGHGKTEKPDDPGRYDITKAAADLRAVLQALGIRRASVLGYSMGGRLALTFAVRYPQMVDKLVLESASPGLKTEAERLARRERDEQLAERILAGGIEAFVSHWENLPLFASQKQLPAGVRGKIRKQRLENDPAGLANSLRGMGTGAQPSWWGRLSELHFPVLLATGEWDAKFCQIAGEMEERLPNAKKIIFPHAGHAIHVEDPKKFGTMVKGFLKNC
>NZ_CP009709.1|WP_013860039.1|1131924_1132743_-|1,4-dihydroxy-2-naphthoyl-CoA-synthase
MAVEWKTEHEYEDILYESYNGIAKITINRPHVRNAFRPETVTEMYDAFSRARDDANIGVIILTGMGEKAFCSGGDQKVRGNGGYVGSDNIPRLNVLDLQRLIRVIPKPVIAMVAGYAIGGGHVLHVVCDLTIAADNAIFGQTGPKVGSFDGGYGAGYLARIVGHKKAREIWYLCRQYNAQEALEMGLVNAVVPYEKLEEETIKWAEEILEKSPMAIRFLKAAFNADTDGLAGLQQFAGDATLLYYTTDEAKEGRDAFKEKRKPDFGQFPRFP
>NZ_CP009709.1|WP_013860038.1|1130081_1131536_-|o-succinylbenzoate--CoA-ligase
MLPNFLKQRAYLTPNRIALVSQGESLTFAGLYEKAKELARKLSGCGMQAEDTAAVLLNSRAETVAILHALQQLRVRTLFLNHRLTTAEMQYQLTDSGAKWLITEKAFREKTEVLNETATVIQSEALGDLPAAGYEERAEFALGDVCSIMYTSGTTGKPKGVLQTYGNHWWSAAGSALNLGVREDDTWLCAVPLFHISGFSILMRSVFYGMTVYLMEKFDEKETAKLLKSGRITTMSVVANMLQRLLRELGHDSLHPNFRCLLLGGGPAPRPLLEACAEKNIPVFQSYGMTETASQTVTLAPEDSLRKIGSAGKPLFPAQIRIVSDGKVCGPFEHGEIAVKGPNVTIGYLNRPDANRKSFREGWFFTGDIGYLDDEGFLYVLDRRSDLIISGGENIYPAEIEEVLLAHPDILEAGVIGVEDEKWGQVPAAFIVTKRAVRERELQAFCETRLAKFKIPKKVYAVPALPRNASNKLVRRKLLELLPS
>NZ_CP009709.1|WP_013860037.1|1128981_1130085_-|o-succinylbenzoate-synthase
MIGIEKVSLSVIKMPLKSPFENALEKVTEREAILLEVLDKEGVAGFGEAVAFSTPWYTEETVQTCFHMLKDVLVPLLREKPVAHPKEVSGRFRSVRRNHMAKAAIETAIWDLYAKKKQKPLWRLIGGARDRVDAGVAVGSHDTADALRQIGAFVDEGYKRVKVKIKPGHDEAFVREIRDAFPDLTLMADANSTYTLADAPRLKRLDRYGLLMIEQPLAADDIVEHAALQKQLETPVCLDESIVTYHDAESALRLGSFRALNIKIGRVGGLYPAIRLHDLCASRGIPVWCGGMIEFGVSRAFNLALASLPGFTIPGDISSSSRFWEKDIIEPEITAENGQIRLPDRPGTGFEIDRAYVKKIRTYTETI
>NZ_CP009709.1|WP_073193867.1|1128557_1128716_+|DUF1540-domain-containing-protein
MAKDVLCEVRNCVFWEEGNLCSAEEIYIVSHTGTRAENQQETDCKTFESMFS
>NZ_CP009709.1|WP_029142607.1|1127606_1128497_+|adhesin
MKKLFPVLLAFTMLFVTACTNKQESKQDHKISVYTTVYPLEYVTQQIGGKYVTVKTIYPPGTDEHTYEPSQKDILKLADSDFFFYIGLGLEGFASKAKQVLEGQNVKMMALGDRLPVPDKTNAKADPHVWLDPIYVKQMAGMITTQLSKKMPEQKAYFKKNYDQLAKKLDRVNAAYKQAVLKSDNKEVVVSHAAYGYWVKRYGIKQIPIAGLSTSDEPSQKQLENIIQKVKQDHISYIVFEKNVPSKIAKVVQQETNTKAVYIHHLGVRTNEEIKAHKDYFTLMDDNLKELEKALQ
>NZ_CP009709.1|WP_017554000.1|1127008_1127245_+|membrane-protein-insertion-efficiency-factor-YidD
MLKFIFIKLIRLYQLAISPLFPPSCRFQPTCSNYGLEAVKRFGALRGGYLAIRRILKCHPFHAGGYDPVPDQWPVKKH
>NZ_CP009709.1|WP_017551355.1|1145139_1145484_+|hypothetical-protein
MTATFLLYQMPDSLSTLCCLFAIGRVLIYHVVSICAIVFLKFVGKFETGHLQFLLQNKTGQTYIAALLRKPDGQKIIRFSLFFEIPMTKAAIPTFYDVTSGMLKMAKRSQSISV
>NZ_CP009709.1|WP_014097633.1|1146534_1146741_+|transcriptional-regulator
MKNNLPEIRSEFGYSQEKLAKELNVSRQTIISIEKGKYNPSLPLALKIAKIFNMKVEDIFTLNEKEEL
>NZ_CP009709.1|WP_014097632.1|1146741_1147113_+|hypothetical-protein
MSNRKMLLICSFFFLIVTIGLLILSFKTKYGLNFNALLTLSLSVLSFNVWYVYPHINKHDERAKFIKRKTINYTYFFILLYLIVFFILSQFTLKVQISNLIILLISFIIITLSFTMTIVAKKN
>NZ_CP009709.1|WP_013860044.1|1147636_1148800_+|glycosyltransferase-family-1-protein
MKPIATPFPPVSMGDIHVYDDIIQYFNFKQVKQALPHRPKSITFVTTGIIPYDGGQTTMLHLGTELSKLGFQVYYLSYFSQPRKAMEINAEFNYAGYQGTCLDVSALKTHQSDIWIGTLWESVYVFKDKPGYKMYFVQDYEPYFYPFGDRYYLAKKTYELGLHMVSLGPWCAEMIEKECRVQSPLDVIRFPVDMEQYPFHPRNFLDYKKKKEFRIAVYTKWDSPRRAPITIQIVLNNFLKLCQKHGYQLDIVYFGTDQSAQFINGKNLGQLTKKELHELYLKSDFGIAPSMTNFSLVPYEMMSSGLPVIDFYEGTGRSFMPENCALFCHLDEQSLFQTFQNAISHPGHIAETVKNAQAHLNTVTWKETIKDFINVINTIQSKNRIVS
>NZ_CP009709.1|WP_013860045.1|1149123_1149303_-|hypothetical-protein
MNKKNQIFLAILLILSVAGFIANMIVGPAPRWIKAYNLLVVLAWGVWIFRTGKEKGRYW
>NZ_CP009709.1|WP_029142730.1|1149644_1150550_-|EamA/RhaT-family-transporter
MNPYIALIAGVLAVTSSAILVKYSTADAGVIAFYRLFFTTIIMLPIFLTARKKAKMRMLKKDLLFSISSGALLAFHFILWFESLDLTSVASSTVLVTLQPVFAFAGSYFIFREPLSLKAIVCAAFSIFGSILISWGDFFISGKALYGDVLALVSCLFVTAYMMIGQYVRKRADVVPYTFIVYLASTVVLFFYVLFAGEAFYPYSARNWICFLLLAVLPTLAGHSVFSWVIKWISASVVSVAILFEPVGAAILAYLLFGEKISWFQAVGGIIILLSIAYFLAQDHAEHRRAVRLNEKSEPAR
>NZ_CP009709.1|WP_029142729.1|1150641_1151331_+|MgtC/SapB-transporter
MVFGDLEILYKLGITAVLGLIIGLERELKRKPLGLKTSLVISIISCLLTIVSIQSAYLFNHAHSVQITMDPLRLAAQIVSGIGFLGAGVILKKDNDTITGLTTAAMIWGASGIGIAVGAGFYMEAIAGVVLIIISVEIIPYLMGKAAQTKLRNKDLIIKVIVRNRDAIPCVLDAIEKQQITIENIRIKDLKDQTHLVDLKARASYKHTTVDVYRHISGMDEVAAAEVES
>NZ_CP009709.1|WP_080588425.1|1151466_1152591_-|DUF1646-domain-containing-protein
MSRGGRLFCFPKKMKGSGLMVMGLTVILLLVLFLPFTKIVERNLEAFLFVMGVAACIVSRSFSWHLVQEALVHPLNITIAVLAMGLLFRWFEKPIEKGIRRISHAMPFRLFIALFVIILGLLSSVITAIVAAIILVAVIRFLRLDRKTEVRLVVLACFAIGLGAVLTPIGEPLSTIVVSKLDADFFYLLRLTGTSVIPAVIVFGVLAALIVKPGQYSSAMETAAGKEPGMATTEDGGLKAETASESYKEIVIRSFKIYLFVMALTLLGAGFEPFIEAYLLDLSPRVLYWINMVSAVLDNATLAAAEISPAMNDKAIQDILMGLLISGGMLVPGNIPNIIAAGKLKISSLEYARFAFPLGLAAMVVYFVISLFLV
>NZ_CP009709.1|WP_029142727.1|1153707_1156119_-|copper-translocating-P-type-ATPase
MAASLQEKKAESVTLGITGMTCAACANRIEKNLSKVEGVKKVNVNLATEKATVQYDPKQATVENLIEKVEKTGYGVLEEKAQLNIMGMTCAACANRVERALKKIPGVVSAAVNLATETASVTYLPGQASAEQMIVAVKKAGYDAKIKGEMDPDYEKKMREKAYKKQKIKFAVGAVISVFFLLQMISDIAMHYGGSFSFHMNPWLQLLLATIVQIFVGGHYYRDAYHAIRGGSANMAVLVVLGTSTAYLYSLVLTILGSGRMLYFETSAIVMTLIVLGKLMETRAKGQTSEAMKKLMGLQAKTARVNRDGKEVEVPVEEVVPGDILFVRAGEKIPVDGVITEGASSIDESMLTGESMPVSKKAGDAVIGATLNKTGSFRFKATKVGKDTALSQIIKLVEEAQGSKAPIQHLADQISGIFVPIVILIALATFAVTYFAAGFTPAIISMVAVLVIACPCALGLATPTAVMVGTGLGAENGVLIKSAEHLQIAHRITTVVLDKTGTITKGEPEVTDLIPYGGFSEEALLAISAAAEKGSEHPLGAAIVKKAAEKDLQLPNVAEFEAVPGHGIRVKIEDREVLIGNKKMMQDARIRIDDVISQMERLEEDGKTAMLVAMDGALSGLIAVADTVKETSAKAIRMLKEMGIETVMITGDNRRTAEAIARQVGVDHVLAEVLPEDKSKEVEKLKRAGNITAMVGDGINDAPALAAADVGIAIGTGTDVAMEAADITLMRGDLMGIVNTIRLSKATMRKIRQNLFWAFAYNVVLIPVAAFGLLNPILAGAAMAFSSVSVVGNTLFLRKWQPV
>NZ_CP009709.1|WP_029142726.1|1156212_1156419_-|copper-resistance-protein-CopZ
MEKVTLNVQGMSCEHCVKAVKGSVGDLSGVKNVDVHLAEGKVDVEFDPNEVTLDKVKEAIEDQGYEVA

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Crispr_ID: NZ_CP009709_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009709_4

1536669-1541901

TypeI

I-C

Consensus_repeat	Method
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	PILER-CR
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	CRISPRCasFinder
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	CRT

79 spacers

cas2,cas1,cas4,cas7,cas8c,cas5,cas3

The CRISPR arrays of NZ_CP009709_4

>merge|NZ_CP009709|4|1536669-1541901|PILER-CR,CRISPRCasFinder,CRT
ATTTCAATCCACTCCCCCATGTAGGGAGCGACACTTCATCCGGTCGTGCAATGCATTTATCAAAAGATTTCAATCCACGCCCCCATGTAGGGAGCGACGGGGTAAGGCCCCCACGGTTTTGTTTTTTGCTGATTTCAATCCACGCCCCCATGTAGGGAGCGACCTGGCAGGGATTCCGGCGGTATTAGCTTATGTCGATTTCAATCCACGCCCCCACGTAGGGAGCGACAAATAAGGCTCTCGAAGATTACGGATTTGATACCATTTCAATCCACGCCCCCACGTAGGGAGCGACTTGTCGCGGATCCCATGGCTACTTTTCCAATACTATTTCAATCCACGCCCCCACGTAGGGAGCGACTTTATGTCATTCAAGCTGTCGCCTACTTCGAGGAGATTTCAATCCACGCCCCCACGTAGGGAGAGACCCGGAGGTGGCGCGACGGTGTTAGGCGAAACGTTGATTTCAATCCACGCCCCCACGTAGGGAGCGACTTAAGCCTGGAAGCCATTTGGTTTGCTTCTGTGATTTCAATCCACGCCCCCACGTAGGGAGCGACGTGCGCTGATTGTTGGCCAATGGCTTTATCAACAGATTTCAATCCACGCCCCCACGTAGGGAGCGACAATAATGGCGCGGTCACGTTTAGTCAGCATCATTATTTCAATCCACGCCCCCACGTAGGGAGCGACTTTTACATTAAGAATGGGATTGCTTATCATTTCGATTTCAATCCACGCCCCCACGTAGGGAGCGACTTCGATAGCTTTTCAACTGCTTTTACTTGATGGGATTTCAATCCACGCCCCCACGTAGGGAGCGACCTTTGCAGTTGATAATACAGTGTATTGGGAAGGTATTTCAATCCACGCCCCCACGTAGGGAGCGACATCATCGAACGCGACCAGGAAGGTGAGGCATCGTATTTCAATCCACGCCCCCACGTAGGGAGCGACCAACTCGAAGGCATACGTGTACCTGATCGACCCGATTTCAATCCACGCCCCCACGTAGGGAGCGACAGCTGGCATGCCACGGAAAAACAGGCTATGCAGATTTCAATCCACGCCCCCACGTAGGGAGCGACGTCTGCGGGTGGACAGGCCGGCTCCCGCCGAAAAAATTTCAATCCACGCCCCCACGTAGGGAGCGACAAAAAATAGTGGGTTCTGTGCAACCTCACTATCAATTTCAATCCACGCCCCCACGTAGGGAGCGACATCGTTGCCCCGGCCGAAAGCCGCGTTGATGTGATTTCAATCCACGCCCCCACGTAGGGAGCGACTCCGATGAGGTTGCTATCACGGTTTCCAAGTTTATTTCAATCCACGCCCCCACGTAGGGAGCGACAGAGCGCACCGGTCGCAGTCACGTTTGGCTGAAAATTTCAATCCACGCCCCCACGTAGGGAGCGACATTGCGTTCTGGAGCTTATTTCGAAAGATAAACAAGATTTCAATCCACGCCCCCACGTAGGGAGCGACCTTGGACTGGCGACAAAGTCAGCGATGGATTTTATTTCAATCCACGCCCCCACGTAGGGAGCGACCTGACCGCGTGACCTGGTCAACGTCAAGCAGTTTGATTTCAATCCACGCCCCCACGTAGGGAGCGACTGGGACAAACTTAAAAATATTGGAGATAACGTTTGATTTCAATCCACGCCCCCACGTAGGGAGCGACGAGGCCAGGAGAAAAAATAAAAAGATTGAGGAAAATTTCAATCCACGCCCCCACGTAGGGAGCGACGCGATGAAATTGCAAGTAGATATACAGGGAATATTTCAATCCACGCCCCCACGTAGGGAGCGACCCGTAAAAATTTGTATCATCATAAACCTCCTACTATTTCAATCCACGCCCCCACGTAGGGAGCGACCATGTCTGGTACTAAGAAAGCCATACAAGGAATCGATTTCAATCCACGCCCCCACGTAGGGAGCGACGGTACTTTCCTTCATCGTTCAAACTTTCCTTTATATTTCAATCCACGCCCCCACGTAGGGAGCGACGTCGTAACAGACCCGCCATACGGCTTATCAAAAATTTCAATCCACGCCCCCACGTAGGGAGCGACATATAAAGTAATGTTATAAGTAATAATCACAAGTATTTCAAACCACGCCCCCACGTAGGGAGCGACGGGACGGGTGGAATAATTCTACCGGCGGGATTGGCATTTCAATCCACGCCCCCACGTAGGGAGCGACTTTTCGCCCGATTCTGTTGACCGCCGGCGAAATTATTTCAATCCACGCCCCCACGTAGGGAGCGACAAAAAAGATTGGCCGAGATGTAGAAAAGTACATGATTTCAATCCACGCCCCCACGTAGGGAGCGACGACGGGTGGAATAATTCTACAGGCGGGATTGGCATTTCAATCCACGCCCCCACGTAGGGAGCGACATTTGTTGATCCGATGAAGGAAAAAGATATGGAAATTTCAATCCACGCCCCCACGTAGGGAGCGACTAGCCTTGTGCAAAAGTTTTTAATGTGAGGGAGTATTTCAATCCACGCCCCCACGTAGGGAGCGACGAAAGAAGCTGTGGAAGACGATGAACCGGCTGAGATTTCAATCCACGCCCCCACGTAGGGAGCGACCTTTCGGCAGGTTAACCAGCGTATCTGTGGCCGGATTTCAATCCACGCCCCCACGTAGGGAGCGACCTTTCGGCAGGTTAACCAGCGTATCTGTGGCCGGATTTCAATCCACGCCCCCACGTAGGGAGCGACTAATGGTATATGAATGGTGGGACGGTAGCAATTGATTTCAATCCACGCCCCCACGTAGGGAGCGACGGACAATTGGGAACGCCTGCTAACAAAATTATAAATTTCAATCCACGCCCCCACGTAGGGAGCGACACGAACTCCCAGAACTTGACGGTACCAGCGCCTGATTTCAATCCACGCCCCCACGTAGGGAGCGACATATGTACCAATATTAGGCGAAATAGCGTGCGGTATTTCAATCCACGCCCCCACGTAGGGAGCGACGCCAAAAAAGCTGGCATAGGCAAGTCGTCGATGGCATTTCAATCCACGCCCCCACGTAGGGAGCGACGAAAGTCGTTTCCAATTCGGTAGCTATTTCATTTATTTCAATCCACGCCCCCACGTAGGGAGCGACAATTGATGAGGATAAAGCGTTCACATGCTCGCACATTTCAATCCACGCCCCCACGTAGGGAGCGACGATTGGGACTATACGCGCTACGGAATCCCCCAAGATTTCAATCCACGCCCCCACGTAGGGAGCGACCAGTATCGAGATCCAGCAACAGGCAATGCAAGATATTTCAATCCACGCCCCCACGTAGGGAGCGACTATCACTGTATCGGAATTATTTCAGCGTTGGTTCATTTCAATCCACGCCCCCACGTAGGGAGCGACAGACATACCCATGCAACTATATGCCTTGAGTCAGATTTCAATCCACGCCCCCACGTAGGGAGCGACTTTATGGAGTAAATCTCTCATTTCATCACCGTAATTTCAATCCACGCCCCCACGTAGGGAGCGACGTAAAAATGGGATCCTGTGTACAGATCTACTTTTATTTCAATCCACGCCCCCACGTAGGGAGCGACAGCAATTCCGCCAGCCATCACCATTTGCACGAGCATTTCAATCCACGCCCCCACGTAGGGAGCGACTGTGCAGGTCGACTGGAACTTCAAGGAGATATACATTTCAATCCACGCCCCCACGTAGGGAGCGACCTCCCTCGAGTTCGGATTAATATTTTGTAATAAATTTCAATCCACGCCCCCACGTAGGGAGCGACGGTTGGCTCTGGATTTACAACCGCGCTGACATTAATTTCAATCCACGCCCCCACGTAGGGAGCGACATTCAAGCTTGCATCATAAAGATCCACTGTAAAATTTCAATCCACGCCCCCACGTAGGGAGCGACTGGCGACCCTTTTTCAACTGGATAACTGGTGGCGATTTCAATCCACGCCCCCACGTAGGGAGCGACCTTTTGACCCGGAATATACCAGGCTGCATAGTATATTTCAATCCACGCCCCCACGTAGGGAGCGACGCGGAAAAAGATAGAACAGCACATCCAGACTTTATTTCAATCCACGCCCCCACGTAGGGAGCGACTGCACTTATCCATAAAGATTGTTATAAGGGATAAATTTCAATCCACGCCCCCACGTAGGGAGCGACAGGATCCGCTACATCTTTAGTTACTTTGATGCCGATTTCAATCCACGCCCCCACGTAGGGAGCGACGAATTCAATTTACAAACCTTTCCATTTCGTAAGATTTCAATCCACGCCCCCACGTAGGGAGCGACAATGATGAAGCACGCCAACTGCTACCGGTTAAAATTTCAATCCACGCCCCCACGTAGGGAGCGACACCACTTACAACAAAAGCAGTGAGATGAGCGAAATTTCAATCCACGCCCCCACGTAGGGAGCGACGTTCAAGTTCACTAAATTTGCGCGGAAAAAGATAATTTCAATCCACGCCCCCACGTAGGGAGCGACACGTCACCATAATGCCTAACATAGTACTAAGTGATTTCAATCCACGCCCCCACGTAGGGAGCGACGGATAATTATAGAATTATAGCGAAAGAACAAAGGATTTCAATCCACGCCCCCACGTAGGGAGCGACACCGCCAACACGTCAACACGCAAAAAAATACTTATTTCAATCCACGCCCCCACGTAGGGAGCGACGCAAAAGGGCTGTTCGCACTAAAGGTGAACGGCATTTCAATCCACGCCCCCACGTAGGGAGCGACGTAAATACATTCATGCTATAATTAAATCATAAGATTTCAATCCACGCCCCCACGTAGGGAGCGACTGCCGCGGTTTATGAGTCTGTACAGCATAGGCAAATTTCAATCCACGCCCCCACGTAGGGAGCGACCGTATAGGAAACACGGTTGATAACAAGCTGTTAATTTCAATCCACGCCCCCACGTAGGGAGCGACATTATCCGACGTAGTCCCGCCAGCAGTATCCAAAATTTCAATCCACGCCCCCACGTAGGGAGCGACGTCGGGAGAGTTTACGACTTTAAAAGTAACCTATTTCAATCCACGCCCCCACGTAGGGAGCGACTCCCCACTTAGTAAGAACGTGTTTTCCTCGTACGATTTCAATCCACGCCCCCACGTAGGGAGCGACTTATGTCGGCGGGTGGACTGGTAACAATAGTTTAATTTCAATCCACGCCCCCACGTAGGGAGCGAC

>NZ_CP009709|4|1|1536669-1541901|PILER-CR
ATTTCAATCCACTCCCCCATGTAGGGAGCGAC	ACTTCATCCGGTCGTGCAATGCATTTATCAAAAG
ATTTCAATCCACGCCCCCATGTAGGGAGCGAC	GGGGTAAGGCCCCCACGGTTTTGTTTTTTGCTG
ATTTCAATCCACGCCCCCATGTAGGGAGCGAC	CTGGCAGGGATTCCGGCGGTATTAGCTTATGTCG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	AAATAAGGCTCTCGAAGATTACGGATTTGATACC
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	TTGTCGCGGATCCCATGGCTACTTTTCCAATACT
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	TTTATGTCATTCAAGCTGTCGCCTACTTCGAGGAG
ATTTCAATCCACGCCCCCACGTAGGGAGAGAC	CCGGAGGTGGCGCGACGGTGTTAGGCGAAACGTTG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	TTAAGCCTGGAAGCCATTTGGTTTGCTTCTGTG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	GTGCGCTGATTGTTGGCCAATGGCTTTATCAACAG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	AATAATGGCGCGGTCACGTTTAGTCAGCATCATT
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	TTTTACATTAAGAATGGGATTGCTTATCATTTCG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	TTCGATAGCTTTTCAACTGCTTTTACTTGATGGG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	CTTTGCAGTTGATAATACAGTGTATTGGGAAGGT
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	ATCATCGAACGCGACCAGGAAGGTGAGGCATCGT
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	CAACTCGAAGGCATACGTGTACCTGATCGACCCG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	AGCTGGCATGCCACGGAAAAACAGGCTATGCAG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	GTCTGCGGGTGGACAGGCCGGCTCCCGCCGAAAAA
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	AAAAAATAGTGGGTTCTGTGCAACCTCACTATCA
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	ATCGTTGCCCCGGCCGAAAGCCGCGTTGATGTG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	TCCGATGAGGTTGCTATCACGGTTTCCAAGTTT
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	AGAGCGCACCGGTCGCAGTCACGTTTGGCTGAAA
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	ATTGCGTTCTGGAGCTTATTTCGAAAGATAAACAAG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	CTTGGACTGGCGACAAAGTCAGCGATGGATTTT
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	CTGACCGCGTGACCTGGTCAACGTCAAGCAGTTTG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	TGGGACAAACTTAAAAATATTGGAGATAACGTTTG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	GAGGCCAGGAGAAAAAATAAAAAGATTGAGGAAA
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	GCGATGAAATTGCAAGTAGATATACAGGGAAT
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	CCGTAAAAATTTGTATCATCATAAACCTCCTACT
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	CATGTCTGGTACTAAGAAAGCCATACAAGGAATCG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	GGTACTTTCCTTCATCGTTCAAACTTTCCTTTAT
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	GTCGTAACAGACCCGCCATACGGCTTATCAAAA
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	ATATAAAGTAATGTTATAAGTAATAATCACAAGT
ATTTCAAACCACGCCCCCACGTAGGGAGCGAC	GGGACGGGTGGAATAATTCTACCGGCGGGATTGGC
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	TTTTCGCCCGATTCTGTTGACCGCCGGCGAAATT
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	AAAAAAGATTGGCCGAGATGTAGAAAAGTACATG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	GACGGGTGGAATAATTCTACAGGCGGGATTGGC
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	ATTTGTTGATCCGATGAAGGAAAAAGATATGGAA
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	TAGCCTTGTGCAAAAGTTTTTAATGTGAGGGAGT
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	GAAAGAAGCTGTGGAAGACGATGAACCGGCTGAG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	CTTTCGGCAGGTTAACCAGCGTATCTGTGGCCGG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	CTTTCGGCAGGTTAACCAGCGTATCTGTGGCCGG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	TAATGGTATATGAATGGTGGGACGGTAGCAATTG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	GGACAATTGGGAACGCCTGCTAACAAAATTATAA
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	ACGAACTCCCAGAACTTGACGGTACCAGCGCCTG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	ATATGTACCAATATTAGGCGAAATAGCGTGCGGT
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	GCCAAAAAAGCTGGCATAGGCAAGTCGTCGATGGC
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	GAAAGTCGTTTCCAATTCGGTAGCTATTTCATTT
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	AATTGATGAGGATAAAGCGTTCACATGCTCGCAC
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	GATTGGGACTATACGCGCTACGGAATCCCCCAAG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	CAGTATCGAGATCCAGCAACAGGCAATGCAAGAT
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	TATCACTGTATCGGAATTATTTCAGCGTTGGTTC
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	AGACATACCCATGCAACTATATGCCTTGAGTCAG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	TTTATGGAGTAAATCTCTCATTTCATCACCGTA
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	GTAAAAATGGGATCCTGTGTACAGATCTACTTTT
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	AGCAATTCCGCCAGCCATCACCATTTGCACGAGC
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	TGTGCAGGTCGACTGGAACTTCAAGGAGATATAC
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	CTCCCTCGAGTTCGGATTAATATTTTGTAATAA
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	GGTTGGCTCTGGATTTACAACCGCGCTGACATTA
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	ATTCAAGCTTGCATCATAAAGATCCACTGTAAA
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	TGGCGACCCTTTTTCAACTGGATAACTGGTGGCG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	CTTTTGACCCGGAATATACCAGGCTGCATAGTAT
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	GCGGAAAAAGATAGAACAGCACATCCAGACTTT
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	TGCACTTATCCATAAAGATTGTTATAAGGGATAA
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	AGGATCCGCTACATCTTTAGTTACTTTGATGCCG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	GAATTCAATTTACAAACCTTTCCATTTCGTAAG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	AATGATGAAGCACGCCAACTGCTACCGGTTAAA
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	ACCACTTACAACAAAAGCAGTGAGATGAGCGAA
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	GTTCAAGTTCACTAAATTTGCGCGGAAAAAGATA
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	ACGTCACCATAATGCCTAACATAGTACTAAGTG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	GGATAATTATAGAATTATAGCGAAAGAACAAAGG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	ACCGCCAACACGTCAACACGCAAAAAAATACTT
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	GCAAAAGGGCTGTTCGCACTAAAGGTGAACGGC
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	GTAAATACATTCATGCTATAATTAAATCATAAG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	TGCCGCGGTTTATGAGTCTGTACAGCATAGGCAA
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	CGTATAGGAAACACGGTTGATAACAAGCTGTTA
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	ATTATCCGACGTAGTCCCGCCAGCAGTATCCAAA
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	GTCGGGAGAGTTTACGACTTTAAAAGTAACCT
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	TCCCCACTTAGTAAGAACGTGTTTTCCTCGTACG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	TTATGTCGGCGGGTGGACTGGTAACAATAGTTTA
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC

>NZ_CP009709|4|4|1536669-1541901|CRISPRCasFinder
ATTTCAATCCACTCCCCCATGTAGGGAGCGAC	ACTTCATCCGGTCGTGCAATGCATTTATCAAAAG
ATTTCAATCCACGCCCCCATGTAGGGAGCGAC	GGGGTAAGGCCCCCACGGTTTTGTTTTTTGCTG
ATTTCAATCCACGCCCCCATGTAGGGAGCGAC	CTGGCAGGGATTCCGGCGGTATTAGCTTATGTCG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	AAATAAGGCTCTCGAAGATTACGGATTTGATACC
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	TTGTCGCGGATCCCATGGCTACTTTTCCAATACT
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	TTTATGTCATTCAAGCTGTCGCCTACTTCGAGGAG
ATTTCAATCCACGCCCCCACGTAGGGAGAGAC	CCGGAGGTGGCGCGACGGTGTTAGGCGAAACGTTG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	TTAAGCCTGGAAGCCATTTGGTTTGCTTCTGTG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	GTGCGCTGATTGTTGGCCAATGGCTTTATCAACAG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	AATAATGGCGCGGTCACGTTTAGTCAGCATCATT
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	TTTTACATTAAGAATGGGATTGCTTATCATTTCG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	TTCGATAGCTTTTCAACTGCTTTTACTTGATGGG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	CTTTGCAGTTGATAATACAGTGTATTGGGAAGGT
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	ATCATCGAACGCGACCAGGAAGGTGAGGCATCGT
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	CAACTCGAAGGCATACGTGTACCTGATCGACCCG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	AGCTGGCATGCCACGGAAAAACAGGCTATGCAG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	GTCTGCGGGTGGACAGGCCGGCTCCCGCCGAAAAA
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	AAAAAATAGTGGGTTCTGTGCAACCTCACTATCA
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	ATCGTTGCCCCGGCCGAAAGCCGCGTTGATGTG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	TCCGATGAGGTTGCTATCACGGTTTCCAAGTTT
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	AGAGCGCACCGGTCGCAGTCACGTTTGGCTGAAA
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	ATTGCGTTCTGGAGCTTATTTCGAAAGATAAACAAG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	CTTGGACTGGCGACAAAGTCAGCGATGGATTTT
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	CTGACCGCGTGACCTGGTCAACGTCAAGCAGTTTG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	TGGGACAAACTTAAAAATATTGGAGATAACGTTTG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	GAGGCCAGGAGAAAAAATAAAAAGATTGAGGAAA
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	GCGATGAAATTGCAAGTAGATATACAGGGAAT
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	CCGTAAAAATTTGTATCATCATAAACCTCCTACT
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	CATGTCTGGTACTAAGAAAGCCATACAAGGAATCG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	GGTACTTTCCTTCATCGTTCAAACTTTCCTTTAT
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	GTCGTAACAGACCCGCCATACGGCTTATCAAAA
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	ATATAAAGTAATGTTATAAGTAATAATCACAAGT
ATTTCAAACCACGCCCCCACGTAGGGAGCGAC	GGGACGGGTGGAATAATTCTACCGGCGGGATTGGC
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	TTTTCGCCCGATTCTGTTGACCGCCGGCGAAATT
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	AAAAAAGATTGGCCGAGATGTAGAAAAGTACATG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	GACGGGTGGAATAATTCTACAGGCGGGATTGGC
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	ATTTGTTGATCCGATGAAGGAAAAAGATATGGAA
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	TAGCCTTGTGCAAAAGTTTTTAATGTGAGGGAGT
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	GAAAGAAGCTGTGGAAGACGATGAACCGGCTGAG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	CTTTCGGCAGGTTAACCAGCGTATCTGTGGCCGG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	CTTTCGGCAGGTTAACCAGCGTATCTGTGGCCGG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	TAATGGTATATGAATGGTGGGACGGTAGCAATTG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	GGACAATTGGGAACGCCTGCTAACAAAATTATAA
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	ACGAACTCCCAGAACTTGACGGTACCAGCGCCTG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	ATATGTACCAATATTAGGCGAAATAGCGTGCGGT
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	GCCAAAAAAGCTGGCATAGGCAAGTCGTCGATGGC
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	GAAAGTCGTTTCCAATTCGGTAGCTATTTCATTT
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	AATTGATGAGGATAAAGCGTTCACATGCTCGCAC
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	GATTGGGACTATACGCGCTACGGAATCCCCCAAG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	CAGTATCGAGATCCAGCAACAGGCAATGCAAGAT
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	TATCACTGTATCGGAATTATTTCAGCGTTGGTTC
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	AGACATACCCATGCAACTATATGCCTTGAGTCAG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	TTTATGGAGTAAATCTCTCATTTCATCACCGTA
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	GTAAAAATGGGATCCTGTGTACAGATCTACTTTT
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	AGCAATTCCGCCAGCCATCACCATTTGCACGAGC
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	TGTGCAGGTCGACTGGAACTTCAAGGAGATATAC
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	CTCCCTCGAGTTCGGATTAATATTTTGTAATAA
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	GGTTGGCTCTGGATTTACAACCGCGCTGACATTA
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	ATTCAAGCTTGCATCATAAAGATCCACTGTAAA
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	TGGCGACCCTTTTTCAACTGGATAACTGGTGGCG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	CTTTTGACCCGGAATATACCAGGCTGCATAGTAT
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	GCGGAAAAAGATAGAACAGCACATCCAGACTTT
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	TGCACTTATCCATAAAGATTGTTATAAGGGATAA
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	AGGATCCGCTACATCTTTAGTTACTTTGATGCCG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	GAATTCAATTTACAAACCTTTCCATTTCGTAAG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	AATGATGAAGCACGCCAACTGCTACCGGTTAAA
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	ACCACTTACAACAAAAGCAGTGAGATGAGCGAA
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	GTTCAAGTTCACTAAATTTGCGCGGAAAAAGATA
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	ACGTCACCATAATGCCTAACATAGTACTAAGTG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	GGATAATTATAGAATTATAGCGAAAGAACAAAGG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	ACCGCCAACACGTCAACACGCAAAAAAATACTT
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	GCAAAAGGGCTGTTCGCACTAAAGGTGAACGGC
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	GTAAATACATTCATGCTATAATTAAATCATAAG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	TGCCGCGGTTTATGAGTCTGTACAGCATAGGCAA
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	CGTATAGGAAACACGGTTGATAACAAGCTGTTA
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	ATTATCCGACGTAGTCCCGCCAGCAGTATCCAAA
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	GTCGGGAGAGTTTACGACTTTAAAAGTAACCT
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	TCCCCACTTAGTAAGAACGTGTTTTCCTCGTACG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	TTATGTCGGCGGGTGGACTGGTAACAATAGTTTA
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC

>NZ_CP009709|4|1|1536669-1541901|CRT
ATTTCAATCCACTCCCCCATGTAGGGAGCGAC	ACTTCATCCGGTCGTGCAATGCATTTATCAAAAG
ATTTCAATCCACGCCCCCATGTAGGGAGCGAC	GGGGTAAGGCCCCCACGGTTTTGTTTTTTGCTG
ATTTCAATCCACGCCCCCATGTAGGGAGCGAC	CTGGCAGGGATTCCGGCGGTATTAGCTTATGTCG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	AAATAAGGCTCTCGAAGATTACGGATTTGATACC
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	TTGTCGCGGATCCCATGGCTACTTTTCCAATACT
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	TTTATGTCATTCAAGCTGTCGCCTACTTCGAGGAG
ATTTCAATCCACGCCCCCACGTAGGGAGAGAC	CCGGAGGTGGCGCGACGGTGTTAGGCGAAACGTTG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	TTAAGCCTGGAAGCCATTTGGTTTGCTTCTGTG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	GTGCGCTGATTGTTGGCCAATGGCTTTATCAACAG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	AATAATGGCGCGGTCACGTTTAGTCAGCATCATT
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	TTTTACATTAAGAATGGGATTGCTTATCATTTCG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	TTCGATAGCTTTTCAACTGCTTTTACTTGATGGG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	CTTTGCAGTTGATAATACAGTGTATTGGGAAGGT
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	ATCATCGAACGCGACCAGGAAGGTGAGGCATCGT
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	CAACTCGAAGGCATACGTGTACCTGATCGACCCG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	AGCTGGCATGCCACGGAAAAACAGGCTATGCAG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	GTCTGCGGGTGGACAGGCCGGCTCCCGCCGAAAAA
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	AAAAAATAGTGGGTTCTGTGCAACCTCACTATCA
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	ATCGTTGCCCCGGCCGAAAGCCGCGTTGATGTG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	TCCGATGAGGTTGCTATCACGGTTTCCAAGTTT
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	AGAGCGCACCGGTCGCAGTCACGTTTGGCTGAAA
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	ATTGCGTTCTGGAGCTTATTTCGAAAGATAAACAAG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	CTTGGACTGGCGACAAAGTCAGCGATGGATTTT
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	CTGACCGCGTGACCTGGTCAACGTCAAGCAGTTTG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	TGGGACAAACTTAAAAATATTGGAGATAACGTTTG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	GAGGCCAGGAGAAAAAATAAAAAGATTGAGGAAA
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	GCGATGAAATTGCAAGTAGATATACAGGGAAT
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	CCGTAAAAATTTGTATCATCATAAACCTCCTACT
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	CATGTCTGGTACTAAGAAAGCCATACAAGGAATCG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	GGTACTTTCCTTCATCGTTCAAACTTTCCTTTAT
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	GTCGTAACAGACCCGCCATACGGCTTATCAAAA
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	ATATAAAGTAATGTTATAAGTAATAATCACAAGT
ATTTCAAACCACGCCCCCACGTAGGGAGCGAC	GGGACGGGTGGAATAATTCTACCGGCGGGATTGGC
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	TTTTCGCCCGATTCTGTTGACCGCCGGCGAAATT
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	AAAAAAGATTGGCCGAGATGTAGAAAAGTACATG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	GACGGGTGGAATAATTCTACAGGCGGGATTGGC
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	ATTTGTTGATCCGATGAAGGAAAAAGATATGGAA
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	TAGCCTTGTGCAAAAGTTTTTAATGTGAGGGAGT
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	GAAAGAAGCTGTGGAAGACGATGAACCGGCTGAG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	CTTTCGGCAGGTTAACCAGCGTATCTGTGGCCGG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	CTTTCGGCAGGTTAACCAGCGTATCTGTGGCCGG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	TAATGGTATATGAATGGTGGGACGGTAGCAATTG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	GGACAATTGGGAACGCCTGCTAACAAAATTATAA
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	ACGAACTCCCAGAACTTGACGGTACCAGCGCCTG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	ATATGTACCAATATTAGGCGAAATAGCGTGCGGT
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	GCCAAAAAAGCTGGCATAGGCAAGTCGTCGATGGC
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	GAAAGTCGTTTCCAATTCGGTAGCTATTTCATTT
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	AATTGATGAGGATAAAGCGTTCACATGCTCGCAC
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	GATTGGGACTATACGCGCTACGGAATCCCCCAAG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	CAGTATCGAGATCCAGCAACAGGCAATGCAAGAT
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	TATCACTGTATCGGAATTATTTCAGCGTTGGTTC
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	AGACATACCCATGCAACTATATGCCTTGAGTCAG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	TTTATGGAGTAAATCTCTCATTTCATCACCGTA
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	GTAAAAATGGGATCCTGTGTACAGATCTACTTTT
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	AGCAATTCCGCCAGCCATCACCATTTGCACGAGC
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	TGTGCAGGTCGACTGGAACTTCAAGGAGATATAC
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	CTCCCTCGAGTTCGGATTAATATTTTGTAATAA
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	GGTTGGCTCTGGATTTACAACCGCGCTGACATTA
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	ATTCAAGCTTGCATCATAAAGATCCACTGTAAA
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	TGGCGACCCTTTTTCAACTGGATAACTGGTGGCG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	CTTTTGACCCGGAATATACCAGGCTGCATAGTAT
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	GCGGAAAAAGATAGAACAGCACATCCAGACTTT
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	TGCACTTATCCATAAAGATTGTTATAAGGGATAA
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	AGGATCCGCTACATCTTTAGTTACTTTGATGCCG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	GAATTCAATTTACAAACCTTTCCATTTCGTAAG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	AATGATGAAGCACGCCAACTGCTACCGGTTAAA
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	ACCACTTACAACAAAAGCAGTGAGATGAGCGAA
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	GTTCAAGTTCACTAAATTTGCGCGGAAAAAGATA
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	ACGTCACCATAATGCCTAACATAGTACTAAGTG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	GGATAATTATAGAATTATAGCGAAAGAACAAAGG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	ACCGCCAACACGTCAACACGCAAAAAAATACTT
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	GCAAAAGGGCTGTTCGCACTAAAGGTGAACGGC
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	GTAAATACATTCATGCTATAATTAAATCATAAG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	TGCCGCGGTTTATGAGTCTGTACAGCATAGGCAA
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	CGTATAGGAAACACGGTTGATAACAAGCTGTTA
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	ATTATCCGACGTAGTCCCGCCAGCAGTATCCAAA
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	GTCGGGAGAGTTTACGACTTTAAAAGTAACCT
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	TCCCCACTTAGTAAGAACGTGTTTTCCTCGTACG
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC	TTATGTCGGCGGGTGGACTGGTAACAATAGTTTA
ATTTCAATCCACGCCCCCACGTAGGGAGCGAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009709.1\|WP_029143054.1\|1542373_1543405_-\|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|188360
NZ_CP009709.1\|WP_013860842.1\|1549902_1551366_+\|transposase	unknown	unknown	gnl\|CDD\|376573
NZ_CP009709.1\|WP_042512418.1\|1548136_1548655_-\|hypothetical-protein	cas8c	cd09757_cas8c_CAS-I-C	gnl\|CDD\|187887
NZ_CP009709.1\|WP_080588413.1\|1548655_1549168_-\|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09752_cas5_CAS-I-C	gnl\|CDD\|273847
NZ_CP009709.1\|WP_029142361.1\|1530153_1531005_+\|MurR/RpiR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224651
NZ_CP009709.1\|WP_029142359.1\|1534413_1535034_+\|histidine-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|366010
NZ_CP009709.1\|WP_042512419.1\|1556050_1556524_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379756
NZ_CP009709.1\|WP_029142358.1\|1535230_1535446_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009709.1\|WP_029143053.1\|1542072_1542363_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP009709.1\|WP_029142360.1\|1531160_1532306_-\|metallophosphoesterase	unknown	unknown	gnl\|CDD\|236506
NZ_CP009709.1\|WP_026104825.1\|1528903_1529818_-\|DUF1002-domain-containing-protein	unknown	unknown	gnl\|CDD\|377628
NZ_CP009709.1\|WP_029141817.1\|1557165_1559589_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP009709.1\|WP_029142362.1\|1527972_1528881_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009709.1\|WP_029142357.1\|1535719_1536139_+\|XRE-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP009709.1\|WP_029143056.1\|1544047_1544908_-\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	COG3649_cas7_CAS-I-C	gnl\|CDD\|187820
NZ_CP009709.1\|WP_017553891.1\|1532532_1533834_-\|proton-glutamate-symport-protein	unknown	unknown	gnl\|CDD\|183075
NZ_CP009709.1\|WP_073193855.1\|1536346_1536565_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009709.1\|WP_042512417.1\|1546545_1547955_+\|ISLre2-family-transposase	unknown	unknown	gnl\|CDD\|284250
NZ_CP009709.1\|WP_029143055.1\|1543401_1544058_-\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|273040
NZ_CP009709.1\|WP_029142363.1\|1527534_1527957_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP009709.1\|WP_013860842.1\|1549902_1551366_+\|transposase	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	1.60072e-06
NZ_CP009709.1\|WP_042512418.1\|1548136_1548655_-\|hypothetical-protein	gnl\|CDD\|187887	cd09757, Cas8c_I-C, CRISPR/Cas system-associated protein Cas8c. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Zn-finger domain containing protein, distant homologs of Cas8 proteins; signature gene for I-C subtype; also known as Csd1 family.	8.9882e-27
NZ_CP009709.1\|WP_080588413.1\|1548655_1549168_-\|type-I-C-CRISPR-associated-protein-Cas5	gnl\|CDD\|273847	TIGR01876, cas_Cas5d, CRISPR-associated protein Cas5, subtype I-C/DVULG. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This small Cas family is represented by CT1134 of Chlorobium tepidum. This family belongs to a set of several Cas protein families, one each for a number of different CRISPR/Cas subtypes, that share a region of N-terminal sequence similarity modeled by TIGR02593. This family represents the Dvulg subtype of CRISPR/Cas locus.	2.01797e-46
NZ_CP009709.1\|WP_029142361.1\|1530153_1531005_+\|MurR/RpiR-family-transcriptional-regulator	gnl\|CDD\|224651	COG1737, RpiR, Transcriptional regulators [Transcription].	2.49746e-75
NZ_CP009709.1\|WP_029143056.1\|1544047_1544908_-\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl\|CDD\|187820	cd09689, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas7 is a RAMP superfamily protein; Subunit of the Cascade complex; also known as Csd2 family.	2.72553e-134
NZ_CP009709.1\|WP_029143053.1\|1542072_1542363_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	3.78276e-36
NZ_CP009709.1\|WP_029143054.1\|1542373_1543405_-\|type-I-C-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	0
NZ_CP009709.1\|WP_026104825.1\|1528903_1529818_-\|DUF1002-domain-containing-protein	gnl\|CDD\|377628	pfam06207, DUF1002, Protein of unknown function (DUF1002). This protein family has no known function. Its members are about 300 amino acids in length. It has so far been detected in Firmicute bacteria and some archaebacteria.	1.12019e-82
NZ_CP009709.1\|WP_029141817.1\|1557165_1559589_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	1.0136e-80
NZ_CP009709.1\|WP_042512419.1\|1556050_1556524_-\|hypothetical-protein	gnl\|CDD\|379756	pfam15978, TnsD, Tn7-like transposition protein D. TnsD is a family of putative Tn7-like transposition proteins type D.	0.00575056
NZ_CP009709.1\|WP_029142357.1\|1535719_1536139_+\|XRE-family-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	1.26778e-15
NZ_CP009709.1\|WP_029142359.1\|1534413_1535034_+\|histidine-phosphatase-family-protein	gnl\|CDD\|366010	pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1). The histidine phosphatase superfamily is so named because catalysis centers on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The larger branch 1 contains a wide variety of catalytic functions, the best known being fructose 2,6-bisphosphatase (found in a bifunctional protein with 2-phosphofructokinase) and cofactor-dependent phosphoglycerate mutase. The latter is an unusual example of a mutase activity in the superfamily: the vast majority of members appear to be phosphatases. The bacterial regulatory protein phosphatase SixA is also in branch 1 and has a minimal, and possible ancestral-like structure, lacking the large domain insertions that contribute to binding of small molecules in branch 1 members.	2.01587e-71
NZ_CP009709.1\|WP_017553891.1\|1532532_1533834_-\|proton-glutamate-symport-protein	gnl\|CDD\|183075	PRK11283, gltP, glutamate/aspartate:proton symporter; Provisional.	0
NZ_CP009709.1\|WP_029142360.1\|1531160_1532306_-\|metallophosphoesterase	gnl\|CDD\|236506	PRK09420, cpdB, bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase.	7.88534e-155
NZ_CP009709.1\|WP_042512417.1\|1546545_1547955_+\|ISLre2-family-transposase	gnl\|CDD\|284250	pfam06782, UPF0236, Uncharacterized protein family (UPF0236).	1.0453e-42
NZ_CP009709.1\|WP_029143055.1\|1543401_1544058_-\|CRISPR-associated-protein-Cas4	gnl\|CDD\|273040	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4. This model represents a family of proteins associated with CRISPR repeats in a wide set of prokaryotic genomes. This scope of this model has been broadened since it was first built to describe an archaeal subset only. The function of the protein is undefined. Distantly related proteins, excluded from this model, include ORFs from Mycobacteriophage D29 and Sulfolobus islandicus filamentous virus and a region of the Schizosaccharomyces pombe DNA replication helicase Dna2p.	8.20628e-32

>NZ_CP009709.1|WP_073193855.1|1536346_1536565_+|hypothetical-protein
MGKTLKSFLGRAACFCFIIPAGGTWALFFLARQLHARLHGTVGTGIITGSTSGSNNCSIPSGMPSVASKVKF
>NZ_CP009709.1|WP_029142357.1|1535719_1536139_+|XRE-family-transcriptional-regulator
MADHENENMDNVKAIFAARLKKVRAAQGYSQPELAKRVGVSDRNISNYETGYSFPSIKVLYRISQVLKVSIDYLLGLTNHVGLKTNEAVSNPEKKLLETLSHEPDLYQMMLKDPEKMANRIYQTWNLIRELDDEDDRNT
>NZ_CP009709.1|WP_029142358.1|1535230_1535446_+|hypothetical-protein
MQLPCLLEGLLCLDLARKLAALPGLLFARESWFMASQKRICSSTMWINEDGMAGIIGPPFLYENVYNLKKG
>NZ_CP009709.1|WP_029142359.1|1534413_1535034_+|histidine-phosphatase-family-protein
MTLFYFVRHGQTEWNADRNRYCGRSDIDLSETGVRQAKLAAGFLKDIPFDAVYASTLGRAVRTAEILVKGRNLEIHQDPRLVETDFGAWEGERQEDFSVNYADNWEAWLQDPGATHAGYTGETAVQVYNRVRACINELVEKHPEETVLVVAHSMAIRFFVAGTLEVPFKNYRMIPQDNTGITIYKEEPENAGFLAINLNTHLYAIK
>NZ_CP009709.1|WP_017553891.1|1532532_1533834_-|proton-glutamate-symport-protein
MKRVSLAWQIFIGLILGIAIGGIFHGNDTVAHILQPFGDFFLRLIKMIVIPIVVSSLIVGVAGAGDMKQVGKLGLKALIYFEIVTTIAIVVGLLAGNLFHPGTGVDMGSLAKTSISSYVETTKETQHNGIVDTILNIVPTNLFESLSQGNMLPIIFFSVMFGIGVAAIGEKGKPVLRFFQGVSEAMFYVTNLVMKVAPIGVFGLIGVTVAQFGLKSLIPLSKLVFTVYGTIIFFVVVVLGLIGWLFRVNIFNLFKILKDELILAYSTASSEAVLPRIMEKMEKFGCPKSITTLVIPTGYSFNLDGSTLYQSLAALFIAQMYGIHMSIGAQISLVLVLMVTSKGIAGVPGVSFVVLLATLGTVGIPIEGLAFIAGIDRILDMARTVCNVVGNTLATIIVSKWEGKYDKEKGEAYLAEISGGGHDSKDHKYVTES
>NZ_CP009709.1|WP_029142360.1|1531160_1532306_-|metallophosphoesterase
MGKKMLMWAAVLSLALFPRTEHADAAFWFQPKRATVDLRLLETSDLHGYMLNYDYAARTEAETYGLALTASLIAAERKAAKNTMLFDDGDLLEGNEMAAYAARRPLKKGEVHPFIRVMNHLNYDAATVGNHDFHYGLDFLKQTISGAKFPFVNANIYYNFEKNDTDDQNFFKPYVILNKKVEDRHGHSHHLKIGVIGFVTPSVIEWEKPSLGGKVKAKDILHTAAWFVPRMKAEGADLIIALAHCGVDPAAKQPFYTGDAVYLLSEVKGIDAILFGHQHRVFPSKFFAGVPGVDIRKGTINGVPAVMPGKWGSHLGVISLTLEKKGEKWEMTEAQSEAKPVYATHNQQAKSIVRPDPDIVRMTAELQKNVLGSKFTLYSRN
>NZ_CP009709.1|WP_029142361.1|1530153_1531005_+|MurR/RpiR-family-transcriptional-regulator
MGTQLHSFPCLHRIQTMYSEFSAKERKIADYILENPQRLVHSTINQVADQLLVADATVFRFCKRIGFSGFQALKIALAAEAARPGKNMDEAVKDTDNEKAVAIKVFESNIQTLQDTIHTLNQKHLHEAVEWICRAKHIVFYGCGSASVIALDALEKFLQTDLAVTAYTDPHLQLLSAARCTKEDVAVFISHAGADKEMLKLLQAVQKTGAKTIAITQFAKSPLSQKADVPLFTVSQEADFRFSSFSARIVQLSLIDTLYVNVMLRYKDTNEEILQKGKETYTV
>NZ_CP009709.1|WP_026104825.1|1528903_1529818_-|DUF1002-domain-containing-protein
MLKRLGLIWFIAMIALGFSMNGVAKASGDNSTVIDEKYGKPIVVTGAALSASQKAEVEKELGVDDANNVEEITVTGDDLVHYIPDGNRNSNMYSSAKITRTDSGGVQVNIVTPENITEVTADMYKNALLTAGIKNAEVEVASPLKVTGHSALVGIYKAYDDSSKSGDKLDSDRTEVASQELSVATDLAKKEGLSNDKVTQLLTEIKQEIADQHPATKEDIEKIVDDKLKDLNINLSDSDRQLLYDLFDQMRKLNINFDSVKSELSSLSDKLSDKINKAAGDKDFWQSVKDFFQNIFDAIRGLFQ
>NZ_CP009709.1|WP_029142362.1|1527972_1528881_+|hypothetical-protein
MVRQVKKTKSFLLTAAFIAFNFCFFTNISVAESPATDGFIIEADRVEGVMLPPEITAGDTAIKQNQVMLRLQYADVTIYGLKITKVLQTPEGPVTIHMNAPGPIQLKNMKDDATKVDFGSIYVPEKAGQIGMKNVRLVAHQQLADNADLPGLDLSMETGAANIDTSGSDEETLRKQADQLTQLLKGGTSDQNKEEKNGKPVTADKAKAGTQDKAKTETQDTEKQHDAKTDGKVTDQNKNKNKKPENADDTKTKNAEGTESDNTGTKPASGQETEKNGTPAKTAPSQSTDKNVQQKEGSNAGN
>NZ_CP009709.1|WP_029142363.1|1527534_1527957_+|hypothetical-protein
MGKFHMFRMNFRNWRRSRPFWGATFTLLSGMIILYVPVQLLEIAAAPGSMVSIGLIFGGLIFLIGGMGYFFPKFNMVFGILAIFLSVLSIMGAMGGFFIGTLLGIIGGSLSVSWRVIRQEEVPASVGTMEEIAAGSAEER
>NZ_CP009709.1|WP_029143053.1|1542072_1542363_-|CRISPR-associated-endonuclease-Cas2
MLVVITYDVSTLTGAGQKRLRKVAKVCQNYGQRVQNSVFECYVDATQFASLKIELSNIIDPDEDSLRFYQLGNNYKNKVMHIGAKPSLDLEDPLIF
>NZ_CP009709.1|WP_029143054.1|1542373_1543405_-|type-I-C-CRISPR-associated-endonuclease-Cas1
MKKLLNTLFITQPDVYLSLDGDNIVLLKEKEQLGRLPLHNLESVAAFGYTGASPALMGYCAERNISLIFFTMNGRFLARVIGKSRGNVVLRKKQYRISDDEIASVQIARNFIIGKIYNQKWILERMTRDYPLRIDVAQFKDVSQLLSAIIKQVRLCDSLETLRGLEGQAAINYNKLFDQMILQQKDDFFFHSRSRRPPLDNVNAMLSFAYTLLANDTASALEGVGLDAYVGFMHQDRPGRVSLALDLMEELRGVYADRFVLSLINIKVINKDDFLKKENGTVIMTDEARKKFLKAWQNKKQEKITHPFLGEKISWGLVPHAQALLLARFLRGDLDEYPPFLWK
>NZ_CP009709.1|WP_029143055.1|1543401_1544058_-|CRISPR-associated-protein-Cas4
MAFDEDEYLMLSGIQHFQFCKRQWALIHIEQAWEENVRTVEGQNIHQKTDSPFIREKRGSKLIVRAMPIKSNELKLTGICDVVEFVKDENGVEIYGNEGKYIPYPVEYKRGKPKKNDSDILQLVAQAICLEEMLLCEVNKGYIFYNEIKRRIEVPITLDEKNKVRKIAAEMQEYYQRRYTPKVKTGPFCNQCSLQNICLPNIIRKRAVSSYIEGKINE
>NZ_CP009709.1|WP_029143056.1|1544047_1544908_-|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MPALDHKIDFAVVLSVTKANPNGDPLNGNRPRQNYDGYGEISDVAIKRKIRNRLQDMGESIFVQSNDRKNDSYNSLKERADANPELNKIFKSKDGSGESFAAIACQEWIDVRSFGQVFAFKGSGNKGVSVGVRGPVSIHTATSVSPIDITSMQITKSVNSEPGKDRGSDTMGMKHRVDFGVYVFYGSINPQLAEKTGFSNEDAEKIKQALVTLFENDASSARPEGSMEVKKVYWWEHQSKLGQYSSAKVHRSLAVTPLVDNPKTFEDYEITLNELSGLKVDAIDGI
>NZ_CP009709.1|WP_042512417.1|1546545_1547955_+|ISLre2-family-transposase
MDIISIIARLLKDTKSLIEFEEQVKILIQNAFTQWVGEIFETLDKTIKQKKLEDGWEYCRSDNRSIQFLFGNVTFKRSLMHDQKGNSHYPLDEWLGLLPYQRYSPLVELKVAELASENTYREVADILKEWTAVSLSHTTVGNMVKHVGKTQAEADKALVEELEIAVSLPEGKKVDYLFSEADGVFVRGLKKKQSMEVHHAILYEGWQTNGKRVSLRQPTVIMTTEAIQTFWDEVQATAANTYSLEKTHVITNSDGGAGYTAERFQTAFSQSEFPVLNQLDTYHVAQAIIRTFGGGKSEIKEQIRKAIRTHDLDQFTLYLDTHESTLTDKKALKKIKEFRSYILKNWDRIFDWRDRVKNVPEGARGLGAMESNQRHISFRMKKRGMHWSELGAEAMVKIKQGILNRTLREVYLKHRSRSERKQRNLKQLIRMSQLLKQPVRPSVGVKHGSVALHSSSSSAMGHLSKILEY
>NZ_CP009709.1|WP_042512418.1|1548136_1548655_-|hypothetical-protein
MSWLLNLYETYQANEEQVGKIEKKRNDQEYTLLPVSHTTQTAHLEVQVTEDGNFYYAEVINDKKDAITLIPCTEESSSRAGSKIAPYPLHDKLIYVAGDFVAYGGKIKKEEPFSYYIQQLGEWANSPFSKYVSSFSRQGLNIGYSKTLFLYTFGYRALLARCNFRKRCNISV
>NZ_CP009709.1|WP_080588413.1|1548655_1549168_-|type-I-C-CRISPR-associated-protein-Cas5
MVEKELNGWQTSAFLIAFLCTFLLQNTAHFIFNPHRPDLAFDRNENKHHNILKRSLKAGGRRDIFLGARECQGYVEPCVFGEGEGYYDQTEEVYFGTMVHGINYPDETGRNEMEVRLWNPVMKNGVIHFIRPDECKLVRKVAEIEMKAFTKENVKPADELLKEIEGGGES
>NZ_CP009709.1|WP_013860842.1|1549902_1551366_+|transposase
MTISSLTQTRDLSIQKNLIPHNWQDYADIPFVIPAVCFPWEIFKPVERDYYTLLYLHLKNERAHDHSDEIQPALFSIPEEEDKSASLLFHPSPAGRKPHPFMPFFRAFELAPLQYIEVMVESVYLQVKSNPLFAAMCGFTEKIPSYRSFARFDQIMTTNDLWEKARLLVVEYNKGEGVVETVEEAAAVDTSHIEAEATLNKTMKTCSCEGDCDCPRILTDDNAGVMRKSTAVSYIAHKLSMVCGVKSGLPLTREVFKGNTPDGKTLETTLETFKAENPEMVEQLDFILADGIYQTPENQKVTKDVLQAKLVSPINPRSRKDKPTAARGIEKINRYGIPVCISEHKMELRGSDLEKGQYIYTCPVFHPNAKQKGLTCPLANHVECCNGAAQGRVFRMDFDQTPQVDVELPQHGRKFKVLYSARTIIERIFGILKDGYSLRRVHKRGKQAVEAHVDRCMISMHIMANMAYHQTGKANCGWTRHRLQRAN
>NZ_CP009709.1|WP_042512419.1|1556050_1556524_-|hypothetical-protein
MLAMSDINCIKHLRNNKGLSISEIQRTMGINWRTAKKYADENQLPKQKAFKKKGMMYEEKWGVIVSDWLFEDLKLRKKLRRTKKQIFEELKEMGFQGSYRTVCYFISEWMNTHQEEKDKGYERLEHPPGEAQVDFGVMEAVQDGEIVDIHALIMMLV
>NZ_CP009709.1|WP_029141817.1|1557165_1559589_-|CRISPR-associated-helicase/endonuclease-Cas3
MESIAHIRESDQKVQTVEEHLLAAKDLAETYGEKIGVKHITGLAALLHDLGKYTHAFRNYILEAVNNPDRPPKRGSVDHSTAGGKLLYSMFHSGKTSPHKALLAEMVGNAIISHHSYLQDFISPEMELKYLNRVESKEIDEFETAKKNFFEKVMSPSSFSDYVNQAEIELKHFIMKDASKPLAHKMMFLTKYIFSALIDADRTNTRLFEENRPEIEHTPVAKLFNQYYEKLLLTLDSFKENSSANARINRLRSGMSEQCDAFAEKPSGIYTLSIPTGGGKTFASLRYALKHAQLYNKKRIIYVVPFTTIIEQNAEEVRKVLQDDVNILEHHSNVVEDADENDEQQDGIMSAQQRLKLARDNWDAPIIFTTMVQFLNVFYAKGSRNIRRLHNMSEAVLIFDEVQKVPVPCISLFNEALNFLKTYCHSSILLCTATQPALNYVEHQLQVSPNSEIIRDLENVLDAFKRVEIVDRATDESFNTEKLAGFIEERMTEVSSVLVILNTKRVVKELYNHLNSNDNTHIFHLSTSMCAAHRNQILEEVRHCLNTGKKVICVSTQLIEAGVDVSFDCVIRSLAGLDSIAQAAGRCNRHGEKETGFVYVINHEEENLSRLPEIKKGKEISKRIFIDLKNNPSIHNGNVLSTQAMEKYFKEFYTELNTRLDYDVPSLQSNMVEMLTADPNHYSYARAYRSNTKKEFPLFLSSSFYTAAEKFRVIDDKTTSVIVPFGKGKDVIAELSSKVTIEDLGKLMKKAQQYTINLYSQELQKLEQNGGIIGLFDGKVLALKEGAYDHEFGLNVENDSELDFLSI

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Crispr_ID: NZ_CP009709_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009709_5

1791265-1791543

Orphan

Consensus_repeat	Method
AAAGAATTCTATCAGGAAATCGGCAAAAAAGGCGGNGAA	CRT

4 spacers

The CRISPR arrays of NZ_CP009709_5

>merge|NZ_CP009709|5|1791265-1791543|CRT
AAAGAATTCTATCAGGAAATCGGCAAAAAAGGCGGAGAAACCACTGCCGAAAAACATGGCAAGGAATTCTATCAAGATATCGGCAAAAAGGGCGGGGAAGCTACTGCTGACAGCCACGACAAAGAATTCTATCAGGAAATCGGCAAAAAAGGCGGAGAATCTACAGCGGAAAATCATGATAAAGAATTCTATCAGGAAATTGGCAAAAAAGGCGGAGAAGCCACTGCTGACAGCCATGACAAAGAATTCTATCAGGAAATCGGAGAAAAAGGCGGTAAC

>NZ_CP009709|5|2|1791265-1791543|CRT
AAAGAATTCTATCAGGAAATCGGCAAAAAAGGCGGAGAA	ACCACTGCCGAAAAACATGGC
AAGGAATTCTATCAAGATATCGGCAAAAAGGGCGGGGAA	GCTACTGCTGACAGCCACGAC
AAAGAATTCTATCAGGAAATCGGCAAAAAAGGCGGAGAA	TCTACAGCGGAAAATCATGAT
AAAGAATTCTATCAGGAAATTGGCAAAAAAGGCGGAGAA	GCCACTGCTGACAGCCATGAC
AAAGAATTCTATCAGGAAATCGGAGAAAAAGGCGGTAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009709.1\|WP_013860580.1\|1795040_1795331_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatC	unknown	unknown	gnl\|CDD\|178810
NZ_CP009709.1\|WP_073193842.1\|1802125_1803742_-\|DNA-helicase-UvrD	unknown	unknown	gnl\|CDD\|273429
NZ_CP009709.1\|WP_029142036.1\|1803761_1805627_-\|group-II-intron-reverse-transcriptase/maturase	RT	pfam00078_RT_CAS-I:CAS-III	gnl\|CDD\|275209
NZ_CP009709.1\|WP_029142032.1\|1795575_1796853_-\|isocitrate-lyase	unknown	unknown	gnl\|CDD\|237893
NZ_CP009709.1\|WP_017552719.1\|1793570_1795028_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatA	unknown	unknown	gnl\|CDD\|234572
NZ_CP009709.1\|WP_042512429.1\|1782535_1782754_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009709.1\|WP_029142033.1\|1797070_1798666_-\|malate-synthase-A	unknown	unknown	gnl\|CDD\|236432
NZ_CP009709.1\|WP_029142027.1\|1785424_1786795_-\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	unknown	unknown	gnl\|CDD\|129571
NZ_CP009709.1\|WP_029143152.1\|1780805_1781921_-\|DNA-(cytosine-5-)-methyltransferase	unknown	unknown	gnl\|CDD\|365904
NZ_CP009709.1\|WP_077615672.1\|1780417_1780711_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366690
NZ_CP009709.1\|WP_029142029.1\|1789871_1790672_-\|arylamine-N-acetyltransferase	unknown	unknown	gnl\|CDD\|225073
NZ_CP009709.1\|WP_029142035.1\|1800046_1802053_-\|NAD-dependent-DNA-ligase-LigA	unknown	unknown	gnl\|CDD\|236137
NZ_CP009709.1\|WP_019721611.1\|1792124_1793558_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatB	unknown	unknown	gnl\|CDD\|235489
NZ_CP009709.1\|WP_080775321.1\|1779998_1780397_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|222853
NZ_CP009709.1\|WP_029142034.1\|1798838_1800005_-\|CamS-family-sex-pheromone-protein	unknown	unknown	gnl\|CDD\|377863
NZ_CP009709.1\|WP_029142026.1\|1784350_1785391_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009709.1\|WP_013860574.1\|1788613_1789528_-\|diacylglycerol-kinase	unknown	unknown	gnl\|CDD\|183982
NZ_CP009709.1\|WP_029142031.1\|1791817_1792024_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009709.1\|WP_029142028.1\|1786988_1788467_+\|sodium/proline-symporter-PutP	unknown	unknown	gnl\|CDD\|273981
NZ_CP009709.1\|WP_029143151.1\|1782182_1782428_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP009709.1\|WP_013860580.1\|1795040_1795331_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatC	gnl\|CDD\|178810	PRK00034, gatC, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC.	2.5739e-38
NZ_CP009709.1\|WP_073193842.1\|1802125_1803742_-\|DNA-helicase-UvrD	gnl\|CDD\|273429	TIGR01073, ATP-dependent_DNA_helicase_PcrA, ATP-dependent DNA helicase PcrA. Designed to identify pcrA members of the uvrD/rep subfamily. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_CP009709.1\|WP_029142036.1\|1803761_1805627_-\|group-II-intron-reverse-transcriptase/maturase	gnl\|CDD\|275209	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase. Members of this protein family are multifunctional proteins encoded in most examples of bacterial group II introns. These group II introns are mobile selfish genetic elements, often with multiple highly identical copies per genome. Member proteins have an N-terminal reverse transcriptase (RNA-directed DNA polymerase) domain (pfam00078) followed by an RNA-binding maturase domain (pfam08388). Some members of this family may have an additional C-terminal DNA endonuclease domain that this model does not cover. A region of the group II intron ribozyme structure should be detectable nearby on the genome by Rfam model RF00029. [Mobile and extrachromosomal element functions, Other].	3.8473e-111
NZ_CP009709.1\|WP_013860574.1\|1788613_1789528_-\|diacylglycerol-kinase	gnl\|CDD\|183982	PRK13337, PRK13337, putative lipid kinase; Reviewed.	0
NZ_CP009709.1\|WP_029142033.1\|1797070_1798666_-\|malate-synthase-A	gnl\|CDD\|236432	PRK09255, PRK09255, malate synthase; Validated.	0
NZ_CP009709.1\|WP_029142032.1\|1795575_1796853_-\|isocitrate-lyase	gnl\|CDD\|237893	PRK15063, PRK15063, isocitrate lyase; Provisional.	0
NZ_CP009709.1\|WP_029143152.1\|1780805_1781921_-\|DNA-(cytosine-5-)-methyltransferase	gnl\|CDD\|365904	pfam00145, DNA_methylase, C-5 cytosine-specific DNA methylase.	5.94145e-98
NZ_CP009709.1\|WP_077615672.1\|1780417_1780711_-\|hypothetical-protein	gnl\|CDD\|366690	pfam01527, HTH_Tnp_1, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family consists of various E. coli insertion elements and other bacterial transposases some of which are members of the IS3 family.	4.19681e-11
NZ_CP009709.1\|WP_029142029.1\|1789871_1790672_-\|arylamine-N-acetyltransferase	gnl\|CDD\|225073	COG2162, NhoA, Arylamine N-acetyltransferase [Secondary metabolites biosynthesis, transport, and catabolism].	5.63893e-12
NZ_CP009709.1\|WP_029142035.1\|1800046_1802053_-\|NAD-dependent-DNA-ligase-LigA	gnl\|CDD\|236137	PRK07956, ligA, NAD-dependent DNA ligase LigA; Validated.	0
NZ_CP009709.1\|WP_017552719.1\|1793570_1795028_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatA	gnl\|CDD\|234572	PRK00012, gatA, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA.	0
NZ_CP009709.1\|WP_080775321.1\|1779998_1780397_-\|hypothetical-protein	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	1.40719e-23
NZ_CP009709.1\|WP_019721611.1\|1792124_1793558_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatB	gnl\|CDD\|235489	PRK05477, gatB, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB.	0
NZ_CP009709.1\|WP_029142028.1\|1786988_1788467_+\|sodium/proline-symporter-PutP	gnl\|CDD\|273981	TIGR02121, Osmoregulated_proline_transporter, sodium/proline symporter. This family consists of the sodium/proline symporter (proline permease) from a number of Gram-negative and Gram-positive bacteria and from the archaeal genus Methanosarcina. Using the related pantothenate permease as an outgroup, candidate sequences from Bifidobacterium longum and several from archaea are found to be outside the clade defined by known proline permeases. These sequences, scoring between 570 and -40, define the range between trusted and noise cutoff scores. [Transport and binding proteins, Amino acids, peptides and amines].	0
NZ_CP009709.1\|WP_029142027.1\|1785424_1786795_-\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	gnl\|CDD\|129571	TIGR00479, 23S_rRNA_uracil1939-C5-methyltransferase_RlmD, 23S rRNA (uracil-5-)-methyltransferase RumA. This protein family was first proposed to be RNA methyltransferases by homology to the TrmA family. The member from E. coli has now been shown to act as the 23S RNA methyltransferase for the conserved U1939. The gene is now designated rumA and was previously designated ygcA. [Protein synthesis, tRNA and rRNA base modification].	0
NZ_CP009709.1\|WP_029142034.1\|1798838_1800005_-\|CamS-family-sex-pheromone-protein	gnl\|CDD\|377863	pfam07537, CamS, CamS sex pheromone cAM373 precursor. This family includes CamS, from which Staphylococcus aureus sex pheromone staph-cAM373 is processed.	1.04912e-165

>NZ_CP009709.1|WP_029142029.1|1789871_1790672_-|arylamine-N-acetyltransferase
MEEQVEAYLNYLKLEHEEPGLNFLQRLIQHHLSCVPYETFSKFHYFREGIYIPPFETFVEHLWEKGWGGTCFTLNINFARLLRSLGFQCSFVRVVPGHVALMVLLNGKKLYVDVGYGSPIMKPVELESKRRHVLHGFGEDIIFTQLEPGRYEIDRRSNGKSFVKKTIEWLPLTEDDLKEDIRASYLDDNANQTMRRVTAVRFNGRECYYLRDRSLKIMNYRNIRELHMRDFGRWKDTIGEVYQIGEDALLETIQFLDERGIRLFSW
>NZ_CP009709.1|WP_013860574.1|1788613_1789528_-|diacylglycerol-kinase
MKRARIIYNPTSGREAFKRHLPDVLQKLELAGYETSCHATTGAGDAIKAARKAVERKYDIVVAAGGDGTINEVVNGIAEQDYRPKLGVIPMGTTNDFARALQIPRDVQAATEIIVKGDTLPVDIGKMNEKYFINIGGGGRLTELTYDVPSRLKTMLGQLAYYLKGIEMLPSIRATQMTIEYDGKLFEGEAMLFLIGLTNSIGGFEKLAPDSSINDGLFTLMILKKTNLAEFIRAVTLALRGEHLNDPNVIYTSASRVKVHSPDKILLNLDGELGGEAPAVFENLYRHLEVFAPLDKIRPQDRVD
>NZ_CP009709.1|WP_029142028.1|1786988_1788467_+|sodium/proline-symporter-PutP
MSDQTLKMISITIYMVLMLWIGWVAYRRTSNLDDYMLGGRSLGPAVAALSAGAADMSGWLLMGLPGGIYLTGLADAWIAIGLTIGAYLNWRLVAPRLRSYTKVAGDSITIPSYLENRFKDPTKMLRLVSALVILIFFTLYVSSGMVSGAVFFENSFHTSYYVGLVIVAGVVVLYTLFGGFLAVSWTDFVQGLIMVIALVLVPIIAFTKTGGPVETFHTVKSINPDLLDFFKGTTALGIISALAWGLGYVGQPHIIVRFMAIKSVKETKSARRIGISWMILSLIGTSLTALIGIAYFHQPGHKLDNPETVFIQLGQILFHPLIAGFVLAAVLAAIMSTVSSQLLVTSSALTEDLYKLFFRRNASDKESVFFGRLAVLVVSVAAALLALNRDSTILQLVSYAWAGFGASFGPVIFLSLFWRKMNHWGALFGMIVGAVTVIVWTVSGLDAKLYSMVPGFAFNLIISMIVSIATYKHHAGIEEEFNDSLSALKKES
>NZ_CP009709.1|WP_029142027.1|1785424_1786795_-|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD
MKITLPVQKNEEIEVVFEDLTHDGAGVAKVDGYPLFIKNGLPGEKARIKVIKANKNYGIGRLLELYEKSPYRVDIPKEEAPKYGGCQLAHISYTGQLKYKENQVRQALARIGKIEGARIHPIIGMDNPWHYRNKAQVPVGEKDGKLVAGFFKPRTHEILDADESVIQLPAVNEAVRAVKEICRELRIPAYDEEHHSGVLRHIMARYGRETGELMVVLITRTAELPHQKKLVDAIVSRLKQVKSIVHNVNPRRTNVILGERTKVLWGNEAIYDKIGDVKFAISALSFYQVNPVQTKVLYDKALEYAGLNGNESVIDAYCGIGTISLFLAQKARKVFGVEVVPEAIEDAKRNAALNVITNVEFEAGTAETVISKWYEAGNKADVLVVDPPRKGCDEALLQTILEMKPKKVVYVSCNPATLARDLRILEDGGYRTADVQPVDMFPHTTHIECVSQLILN
>NZ_CP009709.1|WP_029142026.1|1784350_1785391_-|hypothetical-protein
MRVTELRKLIEKYSKDDLSKIIVELYKSIPKKVRDEKTVDMMLEDFQRYKEAEKKKRKKVKDVNVNDLEREIEQLLQNAYKQNYVIPNHYVSKKDRSKWRFKVKSYIKHLQQVPVAGKEGKRATDLLEELYEMLCYGCGYLIFNTENPFRSVGIAQVELFDILLKRKFSTGINSESISFAIKQVINCYLDMDTLRSDLINVFIANLRTADAKEIAIEQCHQLRMGLKQRTIAPAKETWDNHEYSRERKINDLVETVFRLKIALCEYEAAISYFKSNIQQRFKEVSLFNLLNMLENYDQKDYWLREYETAVKEGIMPRDELQYTYRYLKEKGQFNGFPKEVSHPQGM
>NZ_CP009709.1|WP_042512429.1|1782535_1782754_-|hypothetical-protein
MMRAKFTRLLREKRARRDPAARYERGGSPAARGKRVNFARINTPVINLYESVQKECLGIPIFKPYREKLDTY
>NZ_CP009709.1|WP_029143151.1|1782182_1782428_-|hypothetical-protein
MTKNICPIFFKGDYYPISASEKIIDKSNIKEGDKSKLREFLCDVSRHGFDRLKDLKVDCKGREKEKYSKYKIDKFTKMLED
>NZ_CP009709.1|WP_029143152.1|1780805_1781921_-|DNA-(cytosine-5-)-methyltransferase
MINNEPYKIVSLFSGCGGLDLGLEMSGFKVVWANDIDKHAVTTYQHNIGNIVEGDIRNIDLKDIPDCDVLVAGFPCQPFSSAGNRLGVEDARGTLYEECLRVINDKKPKAVIFENVRGILSTKNKDGSLLLHSIVNFLEAIEPGYSVQYKLLKASDYGVPQQRYRVVFVAFRNDLNVKYEFPRPTHSPDDPSLTVGNIINVPAGTPNQDEVWEFSPQSKALIPYISEGGSWKDIPYEILPPRLKRIRDNMKKYRAPNFYRRFARNEINGTITAAATPENCGIIHPLEDRRYSVREVARIQSFPDDFVFVSDSLASKYRMIGNAVPPLLGKAVGHSVKKCLDNALNPNNKEGKINTEDEVIVSEYGQVAFNF
>NZ_CP009709.1|WP_077615672.1|1780417_1780711_-|hypothetical-protein
MCPDMGNTSEKRKSYNAEFKEMVVELYQTGTPVKQICSEYGLSETTIYKWIRKQKPVKLDDGSSFTPEEFLNLQKELHRLKEENEILKKAMAIFAKK
>NZ_CP009709.1|WP_080775321.1|1779998_1780397_-|hypothetical-protein
MIDEIRAKHHYDLKTMCTVLDVPRSTYYQSKQKKESKTKRENRELTDRIRKIHTESKQRYGAPKIRHMLEKEGLKVSLKRVQRLMKAAGIYSIIRKKYRPHSNKGKMEEHDNLLNQDFSTTTINEKWVTDIT
>NZ_CP009709.1|WP_029142031.1|1791817_1792024_-|hypothetical-protein
MCDRLFELTTTCAYCLRKAGKEIDAVYPVYDWKTNKLLGYYCKKHFLKVKIRNLIEETVEKQANPVEA
>NZ_CP009709.1|WP_019721611.1|1792124_1793558_-|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatB
MNFETVIGLEVHVELKTNTKIFSPAPAHFGAEPNTNTNVIDLGYPGVLPVLNKKVVDYAMKAAMALNCEIATETKFDRKNYFYPDNPKAYQISQFDKPIGKNGWIEIEVDGVKKKIGITRIHMEEDAGKLFHAANEGYSLVDLNRQGTPLIEIVSEPDIRTPEEAYAYLEKLKSIIQYTGVSDCKMEEGSLRCDANISIRPIGQETFGTKTELKNLNSFNYVRKGLQYEQERQKQVLLAGDVIQQETRRFDEATGKTILMRVKEGSDDYRYFPEPDLVDLYIDDAWKERVRAEIPELPDERKKRYTEELGLPAYDAMVLTLTKEMSDFFEATIAAGADAKQASNWLMGEVSAYLNSAQKELHDIALTPESLAGMIKLIENGTLSSKLAKKVFRELVEKGGDPEKIVKEKGLVQISDEGELLKIVTEVLDKNEQSIIDYKNGKDRALGFLVGQVMKATKGQANPPIVNKLLIQEMNKR
>NZ_CP009709.1|WP_017552719.1|1793570_1795028_-|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatA
MSLFDHKISELHEFLHNKEVKVSELVDEAYQKISETDGKVKAFLTLDEERARKTAAELDGKIGSPEAENMLFGMPIGIKDNIVTKDLRTTCASKILENFDPIYDATVMEKLHKENTITIGKLNMDEFAMGSSTENSAFQITRNPWNLDTVPGGSSGGSAAAVAAGEVPFALGSDTGGSIRQPAAFCGVVGMKPTYGRVSRFGLVAFASSLDQIGPITRTVEDNAYLLQAISGLDRHDSTSADVEVPDYVEALKGDVKGLKIAVPKEYLGEGVSEEARQAVLDALKVLEKLGATWEEVSLPHSKYGVAAYYLLASSEASSNLARFDGVRYGYRSKNATSLEELYKKTRSEGFGDEVKRRIMLGTFALSAGYYDAYYKKAQQVRTLIKKDFDDVLEKYDVIIGPTTPTAAFKIGEKIEDPLTMYANDILTIPVNLAGVPGISLPCGFAGGLPLGLQIIGKHFDESTVYRVAHAFEQATDFHNQKPQL
>NZ_CP009709.1|WP_013860580.1|1795040_1795331_-|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatC
MPDISKEQVQHVADLARLEMNETETEKFAKQLGDIIHFAESLNELDTTGVLPTTHVLEIRNVMREDTVEKGLPRELVLKNAPDTQDGMIRVPTIVE
>NZ_CP009709.1|WP_029142032.1|1795575_1796853_-|isocitrate-lyase
MVNEKALELKRSWEKDERWQGIVRPYSPEDVLKLRGSVQIEYTLARRGAEKFWNLLHTEDYIHALGALTGNQAVQQVKAGLKAIYLSGWQVAADANLAGQMYPDQSLYPANSVPNVVKRINQALQRADQIHHAEGDERIDWFAPIVADAEAGFGGPLNVFELTKAMIEAGAASVHLEDQLSSEKKCGHLGGKVLQPTQTAIRHLIAARLAADVMGVPTVIIARTDANAANLITSDVDPYDAPFITGERTAEGFYRTQAGIDQAIARGLAYAPYADMIWCETSEPNLDEARRFAEAIHEKFPGKLLAYNCSPSFNWKKKLDDKTIANFQKEIARMGYKFQFVTLAGFHALNHSMFELARNYRDRGMAAYSELQQAEFANEQYGYTATRHQREVGTGYFDEVSMVISGGTSSTTALTGSTEQEQFTH
>NZ_CP009709.1|WP_029142033.1|1797070_1798666_-|malate-synthase-A
METKAPGITVTGSIQDGYDEILTPEALQFLEQLERHFGERRRELLAYRKKRDEEIKSGKLPHFLEETASIRESDWTIAPLPEDLQDRRVEITGPVDRKMVINALNSGAKIFMACFEDATSPTWENIIEGQIHLRDAVNRTITFTGPNGKEYKLADHPAVLIVRPRGWHLEEKHILVDGKPVSGSLTDFGLYFFHNARRLLENGTGPYFYLPKMESHLEARLWNDVFIFAQKYIGIPKGTIKATVLIETIMAAFEMDEILYELKEHSAGLNCGRWDYIFSYIKKLRTNPQFITPDRSLVTMTVPFMRAYSLLTIKTCHRRNAPAIGGMAAQIPVKDDPAKNEEAFQKVRADKEREARDGHDGTWVAHPGLVPVAMEAFNKEMPEPNQIHSGKQMDFTATADDLLAVPQGEITEKGIRENIYAGIQYIESWLRGRGAVPISNLMEDAATAEISRTQLWHWIRHPKGVLADGRKVTIELYEQIKAEELERIRREIGEEYYRAGRFEEAVALFDRLVKEDEFIEFLTLPAYELLG
>NZ_CP009709.1|WP_029142034.1|1798838_1800005_-|CamS-family-sex-pheromone-protein
MKKWYPLIISMVLLAGCTPGFGSDNKVVQKSNNKKETSVVSSYQISDQYYKNIYPYKTSKSRGLVVSNLNTSYDIEEFETGLMRVAQRNYPPDDYLFQEGQYLTSDTITKWLNRKYTANQLKKKGLKEQDNVGLNPVNDGKGSAKQQNEKNPIYLAQILEQDYLTKDSKGNVKLSGVAIGLALNSVYYYQTEKYGSTYDVNIPQKTLDEKGKQIASEVVRRLRNINALKNVPITVGLYKQQSKDSVIPGNYFAYATVPANSTSADDWKNINEKYYLFPSDDAEKAHRDDEKTFENFKTDIEDFFPNYTGCIGRARYSDGQLADLSIDIPIQFYGQAEVIAFTQYVAGLVVKTFPDYVNLQVSITANNEAKALIVRNSKAKDPTVHIYN
>NZ_CP009709.1|WP_029142035.1|1800046_1802053_-|NAD-dependent-DNA-ligase-LigA
MDNHAAAARAAELRKLLNQYSYEYYVLDRPSVPDAEYDRLLRELQEIENAHPELITPDSPTQRVGGEPLSGFAKVVHDTPMLSLANAFNEADLRDFDRRVRETAGDPYEYVCELKIDGLAISLKYENGLFVQGSTRGDGTIGEDITANLRTVRSIPLRLNEPVTIEARGECFMPKKSFEALNRIKEENGEEPFANPRNAAAGSLRQLDPKIAASRNLDTFMYAIGDTTGLNIATHSEGLAYLEKLGLKVNKETRICRDIGEVLEFIAEWTEKRPALPYEIDGIVIKVNDYAQQAALGTTVKSPRWAIAYKFPAEEVVTKLTGIEVKVGRTGVVTPTAILDPVRVAGTTVQRATLHNEDLIREKDIRIGDYVIVKKAGDIIPEVVRPIPERRTGEERAFSMPSHCPDCGSELVRLEDEVALRCINPNCPAQIREGLIHFVSRNAMNIEGLGEKVISQLFAHELIHNVADIYRLKKEELLQLERMGEKSVSNLLAAIEASKKNSLEKLLFGLGIRHVGAKAAKILAEHFETMERLSEATREELEAIPDIGEKMADSIVAYFENEEALGLVRELAVLGVNMVYKGPKRAEKRNADSPFAGKTVVLTGKLVNLTRNEAKEKLEALGANVTGSVSKNTDLVIAGEDAGTKLAKAEQLGIEVWDEAAFLERLNS
>NZ_CP009709.1|WP_073193842.1|1802125_1803742_-|DNA-helicase-UvrD
MRGNSHVRCEWGGKLEMTSKAYLSISNKSQYTLVKLLASRFQNLCVVGDNDQSIYRWRGADIANILSFEKDYPNAKVILLEQNYRSTKKILQAANKVIENNANRKKKNLWTENDEGQNLVYYRADSEQGEAQFVAGKIKELTASGKRRHSDIAILYRTNAQSRVIEEVLMKSNIAYNIVGGTRFYDRKEIKDILAYLRVIANPDDDLSLARIINVPKRGIGQTSLDKIVRYAADQEVSLFTVLQEIDFIGLSPKIAKACREFYELISNFTRMQEYLSVTELVEELLDKSGYRDALKLEKSLEAESRLENIDEFLSVAQEFEKENDDKSLVAFLTDLALVADIDRLEEDNAQKDAVVLMTLHAAKGLEFPVVFLIGMEEGIFPHSRSLMDEAEMEEERRLMYVGVTRAQEELYLTNAEVRTLYGRMNINPVSRFINEIPEELIEDIRKEEKDRLDFRQVSRGKTERKEKRPPVVPAWQQNGAGNLSWQVGDKAEHKKWGIGTVVSVKGEGKSAELDIAFPSPVGIKRLLAEFAPITKVE
>NZ_CP009709.1|WP_029142036.1|1803761_1805627_-|group-II-intron-reverse-transcriptase/maturase
MTDNNQKLKKKQKLRNNEYYNMQAALDTLYAQSKNGYKFRELYDLIIDERNIKLAFRNIKKNRGSKTSGTNGKTILDIGEKDPSSLIKYVRARMSNFKPHPVRRIEIPKLDGTMRPLGIPTIEDRLIQQCVKQVLEPICEAKFHPHSYGFRPNRSAHHALSRAVTLVNKNKLHYAVDIDIKGFFDNVNHGKLLKQIWSLGIQDKKVINILSKMLKAEIKGVGIPGKGTPQGGILSPLLSNIVLNELDWWISSQWETFKTKKNYNRERMIGKRLVLDQSAKYRALRKTGLKEMFIVRYADDFKIFCRNHKDAFAIFEAVKKWLKERLGLETSPEKSGVINLRKKHSTFLGFKMKAIPKKDKFVAKTNMSDKAKKKAIAKLRGQIKKVENSPREVSKLNATIVGIQNYYRYATHITVDLSKIGFSVRKILYNRTKAILSQKGTKSNTFKKLYPKFNGKVIFIHGVNVFPIDHIRTKYPTNFSQDICPYTDLGRQKIHDQLKGCNQAIIHHLMYNPLPDQSMEYNDNRISLYVGQLGQCAVTNVPLELGDMEVHHKIPRNQGGSDEYRNLIFIRKDVHKLIHSTEKVTIQKYLQKLNLDENALDKINKLRVLVGNDKIVGIITR

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Crispr_ID: NZ_CP009709_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009709_6

2584186-2585866

Orphan

Consensus_repeat	Method
GTTAGTATTTTACCTATGAGGAATTGAAAC	PILER-CR
GTTAGTATTTTACCTATGAGGAATTGAAAC	CRISPRCasFinder
GTTAGTATTTTACCTATGAGGAATTGAAAC	CRT

25 spacers

The CRISPR arrays of NZ_CP009709_6

>merge|NZ_CP009709|6|2584186-2585866|PILER-CR,CRISPRCasFinder,CRT
GTTAGTATTTTACCTATGAGGAATTGAAACAGGCTTGATCCAAAGTTAAACTCTCAATCGCCTCTGGTTAGTATTTTACCTATGAGGAATTGAAACTTTGGCATAACCCATTGGTCTGTCTTCACTTGCCTAGTTAGTATTTTACCTATGAGGAATTGAAACATTTTTACCCATGCACCGTTGCAAGGAACATTTAGGTTAGTATTTTACCTATGAGGAATTGAAACCATGGACAGGCGTTCAGAAAGCTCTGTCCGGTATTAGTTAGTATTTTACCTATGAGGAATTGAAACAGGGTGTAAACTGGGTTTTAAAACGGGTAGGTGCTAAGTTAGTATTTTACCTATGAGGAATTGAAACTACCTATAGCTTTTTATACCAAATCAAAAATGTGCACCGTTAGTATTTTACCTATGAGGAATTGAAACCTTTTTTTGCCACAGTATGGGCAAATTACCGTTTGCGTTAGTATTTTACCTATGAGGAATTGAAACATATCCGGCCGCGATCAGATCCTTTGCCTCCTCGCCGTTAGTATTTTACCTATGAGGAATTGAAACCCCAGATACTGTACATTTAGTTGTAAAACGGTATAAAGTTAGTATTTTACCTATGAGGAATTGAAACAGGAGTGGTAGCCACGTACCAGTCAAACTGCATTTGTGTTAGTATTTTACCTATGAGGAATTGAAACACCGCGTATAAATTGCTAGGCCTTTCCTCGAGTATGTTAGTATTTTACCTATGAGGAATTGAAACGCATTTCCGCCATGGCCTGTTTTTCCGTGGCGTGCGTTAGTATTTTACCTATGAGGAATTGAAACATTTTTACCCATGCCCCGTTACAAGGGACGTTTAATTGTTAGTATTTTACCTATGAGGAATTGAAACTGAAGCAGGCCGAGCGCTTTCGTGCGCTGCTGGGCGTTAGTATTTTACCTATGAGGAATTGAAACTCCCACTCTATATTGGATACATCACCGACCGGATGAGCGTTAGTATTTTACCTATGAGGAATTGAAACTCCCCTACGCCTTTTATGCTATTTTGTAAGGCGCCCGTTAGTATTTTACCTATGAGGAATTGAAACAAATGCTTACAAGCACTAAATCGCACCCCCAAACAGAGTTAGTATTTTACCTATGAGGAATTGAAACCGAAAATGCAAAAACTGGAGATAATCAAAAAGCAAGTTAGTATTTTACCTATGAGGAATTGAAACTTAAAAAAGCTGGAGTAAGGCATATCCGCCTGCACGTTAGTATTTTACCTATGAGGAATTGAAACACCGCGTATAAATTGCTAGGCCTTTCCTCGAGTATGTTAGTATTTTACCTATGAGGAATTGAAACCTCGCTGTGACATAGTAAGGCGTTGTTTTTGCCGTGTTAGTATTTTACCTATGAGGAATTGAAACTTCGTTTGAGTCTACTAGCTGGACGCGATATTTTTGTTAGTATTTTACCTATGAGGAATTGAAACGCGACTGTAAAACTAGAGTTGATACGATATAAACCGAAGTTAGTATTTTACCTATGAGGAATTGAAACGCAGTATTCCAGTCAGTAAACACGTTGGAAAATACCGTTAGTATTTTACCTATGAGGAATTGAAACAGACAAAGAGGGAGGCACAAATTGCCGCCGCCGAAGTTAGTATTTTACCTATGAGGAATTGAAAA

>NZ_CP009709|6|2|2584186-2585866|PILER-CR
GTTAGTATTTTACCTATGAGGAATTGAAAC	AGGCTTGATCCAAAGTTAAACTCTCAATCGCCTCTG
GTTAGTATTTTACCTATGAGGAATTGAAAC	TTTGGCATAACCCATTGGTCTGTCTTCACTTGCCTA
GTTAGTATTTTACCTATGAGGAATTGAAAC	ATTTTTACCCATGCACCGTTGCAAGGAACATTTAG
GTTAGTATTTTACCTATGAGGAATTGAAAC	CATGGACAGGCGTTCAGAAAGCTCTGTCCGGTATTA
GTTAGTATTTTACCTATGAGGAATTGAAAC	AGGGTGTAAACTGGGTTTTAAAACGGGTAGGTGCTAA
GTTAGTATTTTACCTATGAGGAATTGAAAC	TACCTATAGCTTTTTATACCAAATCAAAAATGTGCACC
GTTAGTATTTTACCTATGAGGAATTGAAAC	CTTTTTTTGCCACAGTATGGGCAAATTACCGTTTGC
GTTAGTATTTTACCTATGAGGAATTGAAAC	ATATCCGGCCGCGATCAGATCCTTTGCCTCCTCGCC
GTTAGTATTTTACCTATGAGGAATTGAAAC	CCCAGATACTGTACATTTAGTTGTAAAACGGTATAAA
GTTAGTATTTTACCTATGAGGAATTGAAAC	AGGAGTGGTAGCCACGTACCAGTCAAACTGCATTTGT
GTTAGTATTTTACCTATGAGGAATTGAAAC	ACCGCGTATAAATTGCTAGGCCTTTCCTCGAGTAT
GTTAGTATTTTACCTATGAGGAATTGAAAC	GCATTTCCGCCATGGCCTGTTTTTCCGTGGCGTGC
GTTAGTATTTTACCTATGAGGAATTGAAAC	ATTTTTACCCATGCCCCGTTACAAGGGACGTTTAATT
GTTAGTATTTTACCTATGAGGAATTGAAAC	TGAAGCAGGCCGAGCGCTTTCGTGCGCTGCTGGGC
GTTAGTATTTTACCTATGAGGAATTGAAAC	TCCCACTCTATATTGGATACATCACCGACCGGATGAGC
GTTAGTATTTTACCTATGAGGAATTGAAAC	TCCCCTACGCCTTTTATGCTATTTTGTAAGGCGCCC
GTTAGTATTTTACCTATGAGGAATTGAAAC	AAATGCTTACAAGCACTAAATCGCACCCCCAAACAGA
GTTAGTATTTTACCTATGAGGAATTGAAAC	CGAAAATGCAAAAACTGGAGATAATCAAAAAGCAA
GTTAGTATTTTACCTATGAGGAATTGAAAC	TTAAAAAAGCTGGAGTAAGGCATATCCGCCTGCAC
GTTAGTATTTTACCTATGAGGAATTGAAAC	ACCGCGTATAAATTGCTAGGCCTTTCCTCGAGTAT
GTTAGTATTTTACCTATGAGGAATTGAAAC	CTCGCTGTGACATAGTAAGGCGTTGTTTTTGCCGT
GTTAGTATTTTACCTATGAGGAATTGAAAC	TTCGTTTGAGTCTACTAGCTGGACGCGATATTTTT
GTTAGTATTTTACCTATGAGGAATTGAAAC	GCGACTGTAAAACTAGAGTTGATACGATATAAACCGAA
GTTAGTATTTTACCTATGAGGAATTGAAAC	GCAGTATTCCAGTCAGTAAACACGTTGGAAAATACC
GTTAGTATTTTACCTATGAGGAATTGAAAC	AGACAAAGAGGGAGGCACAAATTGCCGCCGCCGAA
GTTAGTATTTTACCTATGAGGAATTGAAAA

>NZ_CP009709|6|5|2584186-2585866|CRISPRCasFinder
GTTAGTATTTTACCTATGAGGAATTGAAAC	AGGCTTGATCCAAAGTTAAACTCTCAATCGCCTCTG
GTTAGTATTTTACCTATGAGGAATTGAAAC	TTTGGCATAACCCATTGGTCTGTCTTCACTTGCCTA
GTTAGTATTTTACCTATGAGGAATTGAAAC	ATTTTTACCCATGCACCGTTGCAAGGAACATTTAG
GTTAGTATTTTACCTATGAGGAATTGAAAC	CATGGACAGGCGTTCAGAAAGCTCTGTCCGGTATTA
GTTAGTATTTTACCTATGAGGAATTGAAAC	AGGGTGTAAACTGGGTTTTAAAACGGGTAGGTGCTAA
GTTAGTATTTTACCTATGAGGAATTGAAAC	TACCTATAGCTTTTTATACCAAATCAAAAATGTGCACC
GTTAGTATTTTACCTATGAGGAATTGAAAC	CTTTTTTTGCCACAGTATGGGCAAATTACCGTTTGC
GTTAGTATTTTACCTATGAGGAATTGAAAC	ATATCCGGCCGCGATCAGATCCTTTGCCTCCTCGCC
GTTAGTATTTTACCTATGAGGAATTGAAAC	CCCAGATACTGTACATTTAGTTGTAAAACGGTATAAA
GTTAGTATTTTACCTATGAGGAATTGAAAC	AGGAGTGGTAGCCACGTACCAGTCAAACTGCATTTGT
GTTAGTATTTTACCTATGAGGAATTGAAAC	ACCGCGTATAAATTGCTAGGCCTTTCCTCGAGTAT
GTTAGTATTTTACCTATGAGGAATTGAAAC	GCATTTCCGCCATGGCCTGTTTTTCCGTGGCGTGC
GTTAGTATTTTACCTATGAGGAATTGAAAC	ATTTTTACCCATGCCCCGTTACAAGGGACGTTTAATT
GTTAGTATTTTACCTATGAGGAATTGAAAC	TGAAGCAGGCCGAGCGCTTTCGTGCGCTGCTGGGC
GTTAGTATTTTACCTATGAGGAATTGAAAC	TCCCACTCTATATTGGATACATCACCGACCGGATGAGC
GTTAGTATTTTACCTATGAGGAATTGAAAC	TCCCCTACGCCTTTTATGCTATTTTGTAAGGCGCCC
GTTAGTATTTTACCTATGAGGAATTGAAAC	AAATGCTTACAAGCACTAAATCGCACCCCCAAACAGA
GTTAGTATTTTACCTATGAGGAATTGAAAC	CGAAAATGCAAAAACTGGAGATAATCAAAAAGCAA
GTTAGTATTTTACCTATGAGGAATTGAAAC	TTAAAAAAGCTGGAGTAAGGCATATCCGCCTGCAC
GTTAGTATTTTACCTATGAGGAATTGAAAC	ACCGCGTATAAATTGCTAGGCCTTTCCTCGAGTAT
GTTAGTATTTTACCTATGAGGAATTGAAAC	CTCGCTGTGACATAGTAAGGCGTTGTTTTTGCCGT
GTTAGTATTTTACCTATGAGGAATTGAAAC	TTCGTTTGAGTCTACTAGCTGGACGCGATATTTTT
GTTAGTATTTTACCTATGAGGAATTGAAAC	GCGACTGTAAAACTAGAGTTGATACGATATAAACCGAA
GTTAGTATTTTACCTATGAGGAATTGAAAC	GCAGTATTCCAGTCAGTAAACACGTTGGAAAATACC
GTTAGTATTTTACCTATGAGGAATTGAAAC	AGACAAAGAGGGAGGCACAAATTGCCGCCGCCGAA
GTTAGTATTTTACCTATGAGGAATTGAAAA

>NZ_CP009709|6|3|2584186-2585866|CRT
GTTAGTATTTTACCTATGAGGAATTGAAAC	AGGCTTGATCCAAAGTTAAACTCTCAATCGCCTCTG
GTTAGTATTTTACCTATGAGGAATTGAAAC	TTTGGCATAACCCATTGGTCTGTCTTCACTTGCCTA
GTTAGTATTTTACCTATGAGGAATTGAAAC	ATTTTTACCCATGCACCGTTGCAAGGAACATTTAG
GTTAGTATTTTACCTATGAGGAATTGAAAC	CATGGACAGGCGTTCAGAAAGCTCTGTCCGGTATTA
GTTAGTATTTTACCTATGAGGAATTGAAAC	AGGGTGTAAACTGGGTTTTAAAACGGGTAGGTGCTAA
GTTAGTATTTTACCTATGAGGAATTGAAAC	TACCTATAGCTTTTTATACCAAATCAAAAATGTGCACC
GTTAGTATTTTACCTATGAGGAATTGAAAC	CTTTTTTTGCCACAGTATGGGCAAATTACCGTTTGC
GTTAGTATTTTACCTATGAGGAATTGAAAC	ATATCCGGCCGCGATCAGATCCTTTGCCTCCTCGCC
GTTAGTATTTTACCTATGAGGAATTGAAAC	CCCAGATACTGTACATTTAGTTGTAAAACGGTATAAA
GTTAGTATTTTACCTATGAGGAATTGAAAC	AGGAGTGGTAGCCACGTACCAGTCAAACTGCATTTGT
GTTAGTATTTTACCTATGAGGAATTGAAAC	ACCGCGTATAAATTGCTAGGCCTTTCCTCGAGTAT
GTTAGTATTTTACCTATGAGGAATTGAAAC	GCATTTCCGCCATGGCCTGTTTTTCCGTGGCGTGC
GTTAGTATTTTACCTATGAGGAATTGAAAC	ATTTTTACCCATGCCCCGTTACAAGGGACGTTTAATT
GTTAGTATTTTACCTATGAGGAATTGAAAC	TGAAGCAGGCCGAGCGCTTTCGTGCGCTGCTGGGC
GTTAGTATTTTACCTATGAGGAATTGAAAC	TCCCACTCTATATTGGATACATCACCGACCGGATGAGC
GTTAGTATTTTACCTATGAGGAATTGAAAC	TCCCCTACGCCTTTTATGCTATTTTGTAAGGCGCCC
GTTAGTATTTTACCTATGAGGAATTGAAAC	AAATGCTTACAAGCACTAAATCGCACCCCCAAACAGA
GTTAGTATTTTACCTATGAGGAATTGAAAC	CGAAAATGCAAAAACTGGAGATAATCAAAAAGCAA
GTTAGTATTTTACCTATGAGGAATTGAAAC	TTAAAAAAGCTGGAGTAAGGCATATCCGCCTGCAC
GTTAGTATTTTACCTATGAGGAATTGAAAC	ACCGCGTATAAATTGCTAGGCCTTTCCTCGAGTAT
GTTAGTATTTTACCTATGAGGAATTGAAAC	CTCGCTGTGACATAGTAAGGCGTTGTTTTTGCCGT
GTTAGTATTTTACCTATGAGGAATTGAAAC	TTCGTTTGAGTCTACTAGCTGGACGCGATATTTTT
GTTAGTATTTTACCTATGAGGAATTGAAAC	GCGACTGTAAAACTAGAGTTGATACGATATAAACCGAA
GTTAGTATTTTACCTATGAGGAATTGAAAC	GCAGTATTCCAGTCAGTAAACACGTTGGAAAATACC
GTTAGTATTTTACCTATGAGGAATTGAAAC	AGACAAAGAGGGAGGCACAAATTGCCGCCGCCGAA
GTTAGTATTTTACCTATGAGGAATTGAAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009709.1\|WP_029142573.1\|2573971_2574691_+\|YebC/PmpR-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|237084
NZ_CP009709.1\|WP_029142574.1\|2574873_2575893_+\|STAS-domain-containing-protein	unknown	unknown	gnl\|CDD\|132912
NZ_CP009709.1\|WP_029142938.1\|2600742_2602146_-\|pectate-lyase	unknown	unknown	gnl\|CDD\|378931
NZ_CP009709.1\|WP_029142576.1\|2577429_2578203_+\|gluconate-5-dehydrogenase	unknown	unknown	gnl\|CDD\|181295
NZ_CP009709.1\|WP_014096364.1\|2581181_2582240_+\|phosphotransferase-family-protein	unknown	unknown	gnl\|CDD\|270703
NZ_CP009709.1\|WP_029713849.1\|2573273_2573864_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274398
NZ_CP009709.1\|WP_035180873.1\|2587160_2587952_-\|ATPase-AAA	unknown	unknown	gnl\|CDD\|132060
NZ_CP009709.1\|WP_014096357.1\|2599825_2600137_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009709.1\|WP_014096360.1\|2596094_2597558_+\|transposase	unknown	unknown	gnl\|CDD\|376573
NZ_CP009709.1\|WP_029143158.1\|2595066_2595651_+\|TetR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|379409
NZ_CP009709.1\|WP_029142578.1\|2580734_2581139_+\|acyl-CoA-thioesterase	unknown	unknown	gnl\|CDD\|223894
NZ_CP009709.1\|WP_029142575.1\|2576207_2577452_+\|acyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|173844
NZ_CP009709.1\|WP_029142939.1\|2600263_2600593_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009709.1\|WP_029142579.1\|2582670_2583975_+\|transposase	unknown	unknown	gnl\|CDD\|379340
NZ_CP009709.1\|WP_080588433.1\|2571189_2572221_+\|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|223566
NZ_CP009709.1\|WP_029142940.1\|2598367_2599786_+\|NAD-dependent-succinate-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|143421
NZ_CP009709.1\|WP_029142577.1\|2579955_2580519_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380061
NZ_CP009709.1\|WP_014096362.1\|2594342_2594891_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009709.1\|WP_042512451.1\|2586700_2586916_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009709.1\|WP_080775331.1\|2589482_2589911_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226202

Protein	Function_ID	Function_description	E-value
NZ_CP009709.1\|WP_029142573.1\|2573971_2574691_+\|YebC/PmpR-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|237084	PRK12378, PRK12378, YebC/PmpR family DNA-binding transcriptional regulator.	9.24898e-140
NZ_CP009709.1\|WP_029142574.1\|2574873_2575893_+\|STAS-domain-containing-protein	gnl\|CDD\|132912	cd07041, STAS_RsbR_RsbS_like, Sulphate Transporter and Anti-Sigma factor antagonist domain of the "stressosome" complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation. The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain of proteins related to RsbS and RsbR which are part of the "stressosome" complex that plays an important role in the regulation of the bacterial stress activated alternative sigma factor sigma-B. During stress conditions RsbS and RsbR are phosphorylated which leads to the release of RsbT, an activator of of the RsbU phosphatase, which in turn activates RsbV which leads to the release and activation of sigma factor B. RsbS is a single domain protein (STAS domain), while RsbR-like proteins have a well-conserved C-terminal STATS domain and a variable N-terminal domain. The STAS domain is also found in the C- terminal region of sulphate transporters and anti-anti-sigma factors.	2.29631e-36
NZ_CP009709.1\|WP_029142938.1\|2600742_2602146_-\|pectate-lyase	gnl\|CDD\|378931	pfam12708, Pectate_lyase_3, Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.	2.20355e-16
NZ_CP009709.1\|WP_029142576.1\|2577429_2578203_+\|gluconate-5-dehydrogenase	gnl\|CDD\|181295	PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional.	1.25819e-147
NZ_CP009709.1\|WP_014096364.1\|2581181_2582240_+\|phosphotransferase-family-protein	gnl\|CDD\|270703	cd05154, ACAD10_11_N-like, N-terminal domain of Acyl-CoA dehydrogenase (ACAD) 10 and 11, and similar proteins. This subfamily is composed of the N-terminal domains of vertebrate ACAD10 and ACAD11, and similar uncharacterized bacterial and eukaryotic proteins. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 are both significantly expressed in human brain tissues. They contain a long N-terminal domain with similarity to phosphotransferases with a Protein Kinase fold, which is absent in other ACADs. They may exhibit multiple functions in acyl-CoA oxidation pathways. ACAD11 utilizes substrates with carbon chain lengths of 20 to 26, with optimal activity towards C22CoA. ACAD10 may be associated with an increased risk in type II diabetes. The ACAD10/11-like subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K).	1.0047e-86
NZ_CP009709.1\|WP_029713849.1\|2573273_2573864_+\|hypothetical-protein	gnl\|CDD\|274398	TIGR03025, EPS_sugtrans, exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase. Members of this family are generally found near other genes involved in the biosynthesis of a variety of exopolysaccharides. These proteins consist of two fused domains, an N-terminal hydrophobic domain of generally low conservation and a highly conserved C-terminal sugar transferase domain (pfam02397). Characterized and partially characterized members of this subfamily include Salmonella WbaP (originally RfbP), E. coli WcaJ, Methylobacillus EpsB, Xanthomonas GumD, Vibrio CpsA, Erwinia AmsG, Group B Streptococcus CpsE (originally CpsD), and Streptococcus suis Cps2E. Each of these is believed to act in transferring the sugar from, for instance, UDP-glucose or UDP-galactose, to a lipid carrier such as undecaprenyl phosphate as the first (priming) step in the synthesis of an oligosaccharide "block". This function is encoded in the C-terminal domain. The liposaccharide is believed to be subsequently transferred through a "flippase" function from the cytoplasmic to the periplasmic face of the inner membrane by the N-terminal domain. Certain closely related transferase enzymes, such as Sinorhizobium ExoY and Lactococcus EpsD, lack the N-terminal domain and are not found by this model.	0.00198736
NZ_CP009709.1\|WP_035180873.1\|2587160_2587952_-\|ATPase-AAA	gnl\|CDD\|132060	TIGR03015, pepcterm_ATPase, putative secretion ATPase, PEP-CTERM locus subfamily. Members of this protein are marked as probable ATPases by the nucleotide binding P-loop motif GXXGXGKTT, a motif DEAQ similar to the DEAD/H box of helicases, and extensive homology to ATPases of MSHA-type pilus systems and to GspA proteins associated with type II protein secretion systems. [Protein fate, Protein and peptide secretion and trafficking].	7.24503e-50
NZ_CP009709.1\|WP_014096360.1\|2596094_2597558_+\|transposase	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	9.72772e-06
NZ_CP009709.1\|WP_029143158.1\|2595066_2595651_+\|TetR-family-transcriptional-regulator	gnl\|CDD\|379409	pfam13977, TetR_C_6, BetI-type transcriptional repressor, C-terminal. This family comprises the C-terminal portion of proteins that belong to the TetR family of transcriptional regulators. The C-terminus represents the regulatory region, and does not include the DNA binding helix-turn-helix domain. The target proteins that are repressed are involved in the transcriptional control of multi-drug efflux pumps, pathways for the biosynthesis of antibiotics, response to osmotic stress and toxic chemicals, control of catabolic pathways, differentiation processes, and pathogenicity. One of the target proteins is BetI, an osmoprotectant which controls the choline-glycine betaine pathway in E.coli.	7.75676e-17
NZ_CP009709.1\|WP_029142578.1\|2580734_2581139_+\|acyl-CoA-thioesterase	gnl\|CDD\|223894	COG0824, FcbC, Predicted thioesterase [General function prediction only].	1.95342e-30
NZ_CP009709.1\|WP_029142579.1\|2582670_2583975_+\|transposase	gnl\|CDD\|379340	pfam13701, DDE_Tnp_1_4, Transposase DDE domain group 1. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis.	5.67896e-54
NZ_CP009709.1\|WP_080588433.1\|2571189_2572221_+\|NAD(P)/FAD-dependent-oxidoreductase	gnl\|CDD\|223566	COG0492, TrxB, Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones].	1.32999e-64
NZ_CP009709.1\|WP_029142940.1\|2598367_2599786_+\|NAD-dependent-succinate-semialdehyde-dehydrogenase	gnl\|CDD\|143421	cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like. Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species.	0
NZ_CP009709.1\|WP_029142577.1\|2579955_2580519_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|380061	pfam17932, TetR_C_24, Tetracyclin repressor-like, C-terminal domain. TetR family regulators are involved in the transcriptional control of multidrug efflux pumps, pathways for the biosynthesis of antibiotics, response to osmotic stress and toxic chemicals, control of catabolic pathways, differentiation processes, and pathogenicity. The TetR proteins identified in overm ultiple genera of bacteria and archaea share a common helix-turn-helix (HTH) structure in their DNA-binding domain. However, TetR proteins can work in different ways: they can bind a target operator directly to exert their effect (e.g. TetR binds Tet(A) gene to repress it in the absence of tetracycline), or they can be involved in complex regulatory cascades in which the TetR protein can either be modulated by another regulator or TetR can trigger the cellular response. TetR regulates the expression of the membrane-associated tetracycline resistance protein, TetA, which exports the tetracycline antibiotic out of the cell before it can attach to the ribosomes and inhibit protein synthesis. TetR blocks transcription from the genes encoding both TetA and TetR in the absence of antibiotic. The C-terminal domain is multi-helical and is interlocked in the homodimer with the helix-turn-helix (HTH) DNA-binding domain. This entry represents the C-terminal domain present in family members such as HTH-type transcriptional repressor KstR2 as well as fatty acid metabolism regulator proteins. In Mycobacterium smegmatis, KstR2 is involved in involved in cholesterol catabolism, while YsiA in Bacillus subtilis is involved in fatty acid degradation.	1.2431e-38
NZ_CP009709.1\|WP_029142575.1\|2576207_2577452_+\|acyl-CoA-dehydrogenase	gnl\|CDD\|173844	cd01155, ACAD_FadE2, Acyl-CoA dehydrogenases similar to fadE2. FadE2-like Acyl-CoA dehydrogenase (ACAD). Acyl-CoA dehydrogenases (ACAD) catalyze the alpha,beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of ACAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. The ACAD family includes the eukaryotic beta-oxidation, as well as amino acid catabolism enzymes. These enzymes share high sequence similarity, but differ in their substrate specificities. ACAD's are generally homotetramers and have an active site glutamate at a conserved position.	0
NZ_CP009709.1\|WP_080775331.1\|2589482_2589911_-\|hypothetical-protein	gnl\|CDD\|226202	COG3677, COG3677, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	2.75312e-05

>NZ_CP009709.1|WP_029142579.1|2582670_2583975_+|transposase
MNYITSVSKIKYAFRLKKSTNFSGLLPILQFLERMKIEQTFRDFDCLKKYNAKYPLSKIFIYLVIGWLSNCSRLSHFRTLQDDPLILAFMGEKCPHYTLLNKDLLRLEKLEGADLEFKERMMDLIEPWLDKELILDFDSTVETVYGGQEKAGVGVNPYKPGRKSYHPLLVFEGKSRLCLNARLREGNSHSSQGVLGFAEETYQLLSPHYPIRYARFDKGFGGEDFYSYWENGGIGYTGKLRWTSRLKKRVENDDSPWIRYVDDELTVIEGKAVDYQASSWKKPRRVAVIRKADKYEESQLQACDFLWKYEAIVTNMDWEPIDIWRFYNQRACMENYIKESKYGFSMGKISTHSFDANQMDLLIKLLAYNLFEIFKKEHCPPAYRSYTIRRFRREFIYAAGVLVYHSRSVILNICETYAHKKAFRQMIQSVRLID
>NZ_CP009709.1|WP_014096364.1|2581181_2582240_+|phosphotransferase-family-protein
MNSDTIPVRKGEELDLTRLQQYLREKLPQMPDAPLEVAQFSAGRSNLTYQLKASSWEAVLRRPPLGPVAPKAHDMGREFRVLKALRPFFAPAPEVLLFEEDPFVIGAPFFLMERKHGIVLDTAFPPGVEPKKETCRRISSIMVDRLVELHAIPYEETELLSMSKPAGFLERQVNGWIERYLRAKTDEIPEAEPLIHYLRDHIPPQQGAAVIHYDYKLNNAMFNEDFSEMTGLFDWEMATIGDPLADLGAALSYWTEKDDPDLIKNGLGEPSVTTLDGFMTRREFVEAYAKKSGRDVSNIDYYLIFGYFKLAGICQQIYYRYKRGQTQDRRFAHFGNVVRSLIRHAVEVAERV
>NZ_CP009709.1|WP_029142578.1|2580734_2581139_+|acyl-CoA-thioesterase
MHELKLRTRFCETDAIGHINNTSYFIYLEDARLKFFESIGASVEIKDFNIILASVKCDFISQAFYNEELTIRTGVAKLGNTSCELAHEMLDAETGRLIAKGKAVVVFFDFDKQQSRPIPDDIRGILEKHLQPVM
>NZ_CP009709.1|WP_029142577.1|2579955_2580519_+|TetR/AcrR-family-transcriptional-regulator
MKAKITEHSIRLFEQKGFTETSIQDIVDSIGATKGTFYYYFSSKEQLLMDIHMDYITKLLEKQKAILSENGSCKAKLHALVLMLLESIKTEKAKALIFFREIKNLSGEKLELILQKREAFRFGVEKLIREGIEIGEFAGHLDANLTSFAILGMVNWSYQWFKPEGRKSAAEVAELFMDIVLHGIEKA
>NZ_CP009709.1|WP_029142576.1|2577429_2578203_+|gluconate-5-dehydrogenase
MNVLELFSLKGKTAIVTGGGRGLGEQIARAFAEAGADVVLCSRKKAACEEAAARIESLGVKALALECDITNRARVDEVVAETVKQFGKIDILVNNSGATWGAPAEDMPVEAWEKVISTNVTGTFHMSQAAGKAMIKQGHGKIINIASIAGLGGVDPRIMDTIGYNTSKGAVITFTKDLAAKWGRYGIHVNAIAPGFFPTKMAKVIIERGKNPILEATPLGRFGNDQDLKGAAVFLASAASDYVTGDVLLVDGGMHVL
>NZ_CP009709.1|WP_029142575.1|2576207_2577452_+|acyl-CoA-dehydrogenase
MDFDYSPKVKALISKLERFMEENVYPGEKLFEEQLNTQETRWAAVPPIMEELKAKAKQEGLWNLFLPDREYGAGLSNLEYAPLCEIMGRSIIAPEVFNCNAPDTGNMEVLARYGSDEQKEKWLKPLLNGDIRSCFSMTEPDTASSDATNISCSIVRDGDEYIVNGRKWWSSGAGDPRCKIAIVMGKTNPDAPRHEQQSMILVPLDTPGVKIERMLPVFGYDDAPHGHAEITYENVRVPAENMIWGEGKGFAIAQGRLGPGRIHHCMRLIGAAERALELLCKRIQNRVPFGKPLAEQGVIRQWVAESRIEIEQARLLTLKAAFMMDTVGNKVARKEIAMIKAVAPRMALNVIDRAIQAFGAAGVSDDFPLARLWANARTLRLADGPDEVHLDQIARLEMKPYQERGLADERVRTV
>NZ_CP009709.1|WP_029142574.1|2574873_2575893_+|STAS-domain-containing-protein
MSEHPNIHVGGLQFEWELDKGRFIFEGEDAVLFWIPTAMRNLFTTIEEISGEEASNVVFETAGFRQGLLVADYFNKIKDFDVKKASERITTTYASAGWGRAVIKDMDFDQKTLTIELKDSWEHKINAAQGKKTGSNFLPAHYAGVFTGLLHTNIWYKVVRYQIEGHDSTIIEYFPSDITVSHNIHQLARKKEAEQIIQLEALVEDKTRELKELVKQLSSPIIPILDGIVVVPLIGKYDDERAEELIEKTLKNLPQYKAKYLVLDLTALDVEDDPHSIQFIENIGKASSLIGTQTILVGISPSMSMTISSSGLDFSQFDCFQTLQHSIHYALGQLGRKIL
>NZ_CP009709.1|WP_029142573.1|2573971_2574691_+|YebC/PmpR-family-DNA-binding-transcriptional-regulator
MGRKWNNIKDKKAARDANTSRIYAKFGREIYVAAKQGVPDPVANSALKMVLERAKTYSVPKAIIDRAIEKAKGGADENYDELRYEGFGPGGSMIIVDTLTNNVNRTASEVRAAFGKNGGNMGVSGSVAYMFDKTAVFGIEGKTADEVLELLLEADIDVRDVFEEDGAVIVYAEPDQFHAVQEAFENAGITEFTVAELTMLPQNEVTLPDEDREKFEKLIDVLEDLEDVQQVYHNVNFGD
>NZ_CP009709.1|WP_029713849.1|2573273_2573864_+|hypothetical-protein
MYKKKGSVNMDRKIVFGISLVYVLWMAVLCAMQYTAGSSWKAAVALGGVISGAIPLILSWIPRLRFHLPLVISYFLFLTGSQYFGSIRGWYGLGWWDTFLHFVSGVLLGFAAIALYERLVRRDAGKGVSAWFVFLFVLGFAALGGVLWEIYEFSGDQFFGTTLQGGGNKDTMTDLIADVLGGLVVATGSGIRTKRK
>NZ_CP009709.1|WP_080588433.1|2571189_2572221_+|NAD(P)/FAD-dependent-oxidoreductase
MDHEIYDVTIIGGGPIGLFTAFYSGMRKLKTKVLESSGQLGGKISMFYPEKTLRDIGGIRKITGGDLVKELIRQAETFSPTILFHQHVSGLKRRPDGILMLSTENGGLHLTKTVILTVGAGIFKPIKLDIPGAERYESGNLHYAVDDLNRFRNKRVLISGGGNAAVDWANELAGIAESITIVHRREAFSGHEYDVSEMVKNARLFIPYCISALHGTGNRIERVAVKHAGTGEEIWLEADEVVVNHGIQGDYGGILNWGLKMKDERIEVNGAMETNIPGIFAAGDAATYPHKLKLIAGGFAEGPVALNSAVRYMCPDAEPMAMYSTHHEDFADENGREKETQAR
>NZ_CP009709.1|WP_042512451.1|2586700_2586916_+|hypothetical-protein
MVTRKEKRNREKEANYFFEFLKIQKHFFKDLMNNLKKVADHRHQSYITYGPEVLLFTVRSHLQCRLYGQWQ
>NZ_CP009709.1|WP_035180873.1|2587160_2587952_-|ATPase-AAA
MLDFFEMKGVPFTREIAPDVLFASSSHKEAAARLEYAVQNRQFCLLTGEAGMGKSTAIRSLVHHLDPIHYHYLYICDSSLTPKLFYREVLQNFGIQPAFRSNDVKRQYQSLMLDIYENEKKQIVIVLDEAHHFSDSMLQELRFILNFREDSMSPLSLIVAGQPSLRNLLKVKHLEAIDQRIQMRCQMSSLTERETADYIGHQLRVVETPHEVFSEEAIQAIYNFSQGVPRKVNTLCSQSLLDAFIQGNKVVGESHIHRVINEL
>NZ_CP009709.1|WP_080775331.1|2589482_2589911_-|hypothetical-protein
MRRRCPDCRKTFSLMPCFTSPWARFANHIYEFLGRWLMEGVPIGQLAQRLTTPSVSEVSLKTLYRWKHRFLEFWGKWWIDQRKKWASEFQEGESFLSLYREGIRSDEEIQLLLSFFFAEIGSVPSKGRLFSTINLRQPFYHN
>NZ_CP009709.1|WP_014096362.1|2594342_2594891_-|hypothetical-protein
MNWIIWLIIACEIGFWVFILLGLSFRYLLKKEKLGFIFLALTPVVDLILIIAATFDLYSGTTATKAHALAAIYIGISVGFGKSMIRWADEHFQYYITKTGPKPVKLYGLQFAKQNLKSWGRHLLSYLIGASLIGIIYYFINDYERTKALIQVLGIWSLVLIIDLLISLSYFVFPRQPGKPTI
>NZ_CP009709.1|WP_029143158.1|2595066_2595651_+|TetR-family-transcriptional-regulator
MPKIVDHDNRKKAIAEATWQVILEQGMKGATVRNIARKAGLSLGALRHYFSTQEELLIYAMDLVKERVAERVEKIALKNLPPKEMILQMLLEIVPTNETTRAEMEVWLEFVLYFRNKGNRESQNDGILEGIQKLLDSLDRAQFLKKEIDKDLETERLCALIDGLAIHAILNPTRLTKERIISILAHHIDEICHF
>NZ_CP009709.1|WP_014096360.1|2596094_2597558_+|transposase
MTISILTQTRDFSIQQNLIPHNWQDYADIPFVIPSMCFPWEIFKPIEREYYTLLYLHLKNERAHDPSNEIQPALFSITEEEDKSASSLFHLPSTGRKPHPFMPFFRAFELASLQYIEVMVESVYLQVKSNPLFATMCGFTEKIPSYRSFARFDQIMTTNGLWEKARLLVVEYHKGEGVVETNEEAAAVDTSHIEAEATLNKTRKTCSCEGNCDCPRVLTDDNVGVMRKSNAVSYIAHKLSMVSGVRSGLPLTREVFKGNTPDGKTLEPTLETFKAEHPEMAEQLSFILADGIYQTPENQKVTKDVLQAKLVAPINPRNRKDKPTTARGIEKINRYGTPICISGHKMELRGSDREKGQYIYTCPVFHPNAKQEGLTCPLANHAECCNGAAQGRVFRIDFDQTPQVDVELPQHGRTFEVLYSARTVIERIFGILKDGYSLRRVHKRGKQAVEAHVDRCMISMHIMANMAYHQTGKANCGWTRNRLQRAN
>NZ_CP009709.1|WP_029142940.1|2598367_2599786_+|NAD-dependent-succinate-semialdehyde-dehydrogenase
MEDYLMYLNGEWTGEGLPKIKVDNPASGEVIATIPKGGEKEAKLAVDAAHAAFPAWAALSAYERSAYLRTWFELIRQHENELARTMTIEQGKPLKEALGEMRYANGFIEWFAEEGKRVYGETIPASATNKRLFVHKQPVGVVAAITPWNFPAAMITRKVAPALAAGCTVVIKPAKQTPLTALKLAELAAKAGIPKGVMNVITGSAKEIGDTWLADERVRKLTFTGSTEIGKELMRGSADTVKKVSLELGGHAPVIITKHADLDKAAEGTVAAKFRNAGQTCVCSNRIYVQEEVYEAFTKKFTEKVKALRVGDGLAEGTDIGPLIDRNAVEKVEHHVKDAVEKGATVETGGSTKDGLFFEPTVISNVTDEMICMKEETFGPLAPVTKFTDIDEAIRRANDSIYGLAAYVFTENISEGIQIAEGLEYGIVGLNDGLPSTPQAPFGGFKQSGLGREGGRYGIEEFLEVKYISLGL
>NZ_CP009709.1|WP_014096357.1|2599825_2600137_+|hypothetical-protein
MGVPLFWFQTDCGKRTKYFGKKELNLVPNAGKPTKIRVVPVSLLEFFDKTKAIPTTVQENFKKRFRPRSQCPSLRTKGIRAVAGKKTKCSKFPGKASFMVKRR
>NZ_CP009709.1|WP_029142939.1|2600263_2600593_+|hypothetical-protein
MQDEAKPVKILYRNVFRRHHHDKRHQVSPGNDFYRGLKMTNIRKSSSEKNASAARGIKQPARIFRTPIHAAAGAATPENENGQTHIFKIEACRIGYGMGKRMKIGRHNF
>NZ_CP009709.1|WP_029142938.1|2600742_2602146_-|pectate-lyase
MIHLDKHHDPRTNGMLLRQLSRRAVQPGTLIQENEALFQKYCQPEFHKPFSLSRLLLNRRYPVEPYKTLADQNGLVYPEWKTILDQEYSRLLSVASRTVNVADFGAAGDGKTDCTAAFQKALGNGRVKVIVPEGVYLVKGLKLPSWTCLCGSGKGVTVIKLHPHAPKKTRLIQNAHFHRGNHHISVEGLTLDWNVERLGNEERTAAGNNRSSCLTFAHVTFGWVKNVEAAGAGLHGFDVSSARYHYLGDGFLAPGRSRYIWLDGLTASGFGDDGITTHHSDYCFISNSFCYNPSGKAHKKGFSNSNGIEIDDGSRHVWLYNNASSGCFGGVEIKAHHNASAASHVHLYGHLSVRDNRSFNFRHIGHHKGKDSDSKSADHIVAANLVSIAPVFTDLYEGSTPRSLVVSAYRNVVINGLTALGDPDYDFKGNPVVAIQYRAKNVILKNVEISGFQNAKRIKGKDKCVLL

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Crispr_ID: NZ_CP009709_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009709_7

2785593-2786680

TypeI

Consensus_repeat	Method
GTCACACTCCTCGTGAGTGTGTGGATTGAAAT	CRISPRCasFinder
GTCACACTCCTCGTGAGTGTGTGGATTGAAAT	CRT
GTCACACTCCTCGTGAGTGTGTGGATTGAAAT	PILER-CR

16 spacers

cas7,cas8c,cas3

The CRISPR arrays of NZ_CP009709_7

>merge|NZ_CP009709|7|2785593-2786680|CRISPRCasFinder,CRT,PILER-CR
GTCACACTCCTCGTGAGTGTGTGGATTGAAATAACATCACCCAAAAAATTTTGCCACCAACTACAAGTCACACTCCTCGTGAGTGTGTGGATTGAAATTTGGTCGCGCACTCTAATTTTGATCCTCCTGAAGGTCACACTCCTCGTGAGTGTGTGGATTGAAATATTACCTGGCATGGATCCGTCTGTGTACGTTAAGTCACACTCCTCGTGAGTGTGTGGATTGAAATACGCAAAGTGGTTATACATCGGTTTCGATTCATTGTCACACTCCTCGTGAGTGTGTGGATTGAAATCGCTGCAACTTCGTTAATATCAATCGTCAATTAAGTCACACTCCTCGTGAGTGTGTGGATTGAAATAAGAAATCTTTTGTTCCTCCGAACTAAACAAATACGTCACACTCCTCGTGAGTGTGTGGATTGAAATGTCCAGCTTGACGCCTGGTCAATCCGTTCGGGCGTCACACTCCTCGTGAGTGTGTGGATTGAAATGGGAATCAACAATGACAATTGATCTACCAATTAAAGTCACACTCCTCGTGAGTGTGTGGATTGAAATGATAATATACTGTTGTGTACTATCTGAAGTGCTAGTCACACTCCTCGTGAGTGTGTGGATTGAAATTGCTCCGTCCGTGGTTGCCCATCCGGTATTCCTGAGTCACACTCCTCGTGAGTGTGTGGATTGAAATATGGATAGCGACTATAAACTCCCAGAAATATATGTCACACTCCTCGTGAGTGTGTGGATTGAAATCGCCCTGTGCTGCACAGACTCATAGACTGCCGCACGTCACACTCCTCGTGAGTGTGTGGATTGAAATCACCTCATACAAAAAGTTAACAATAACCAAAGCCGTCACACTCCTCGTGAGTGTGTGGATTGAAATTCAGCCAAAGTAACTTCGGGTTTAGGTTCTGGATGTCACACTCCTCGTGAGTGTGTGGATTGAAATTGCTCCGTTTCTTTTTCGGCCGGCTGTACTGTAAGTCACACTCCTCGTGAGTGTGTGGATTGAAATAAATCGTTAAGAGCGTCTTGATATTGCTTTCTTGTCACACTCCTTGCGAGTGTGTGGATTGAAAT

>NZ_CP009709|7|6|2785593-2786680|CRISPRCasFinder
GTCACACTCCTCGTGAGTGTGTGGATTGAAAT	AACATCACCCAAAAAATTTTGCCACCAACTACAA
GTCACACTCCTCGTGAGTGTGTGGATTGAAAT	TTGGTCGCGCACTCTAATTTTGATCCTCCTGAAG
GTCACACTCCTCGTGAGTGTGTGGATTGAAAT	ATTACCTGGCATGGATCCGTCTGTGTACGTTAA
GTCACACTCCTCGTGAGTGTGTGGATTGAAAT	ACGCAAAGTGGTTATACATCGGTTTCGATTCATT
GTCACACTCCTCGTGAGTGTGTGGATTGAAAT	CGCTGCAACTTCGTTAATATCAATCGTCAATTAA
GTCACACTCCTCGTGAGTGTGTGGATTGAAAT	AAGAAATCTTTTGTTCCTCCGAACTAAACAAATAC
GTCACACTCCTCGTGAGTGTGTGGATTGAAAT	GTCCAGCTTGACGCCTGGTCAATCCGTTCGGGC
GTCACACTCCTCGTGAGTGTGTGGATTGAAAT	GGGAATCAACAATGACAATTGATCTACCAATTAAA
GTCACACTCCTCGTGAGTGTGTGGATTGAAAT	GATAATATACTGTTGTGTACTATCTGAAGTGCTA
GTCACACTCCTCGTGAGTGTGTGGATTGAAAT	TGCTCCGTCCGTGGTTGCCCATCCGGTATTCCTGA
GTCACACTCCTCGTGAGTGTGTGGATTGAAAT	ATGGATAGCGACTATAAACTCCCAGAAATATAT
GTCACACTCCTCGTGAGTGTGTGGATTGAAAT	CGCCCTGTGCTGCACAGACTCATAGACTGCCGCAC
GTCACACTCCTCGTGAGTGTGTGGATTGAAAT	CACCTCATACAAAAAGTTAACAATAACCAAAGCC
GTCACACTCCTCGTGAGTGTGTGGATTGAAAT	TCAGCCAAAGTAACTTCGGGTTTAGGTTCTGGAT
GTCACACTCCTCGTGAGTGTGTGGATTGAAAT	TGCTCCGTTTCTTTTTCGGCCGGCTGTACTGTAA
GTCACACTCCTCGTGAGTGTGTGGATTGAAAT	AAATCGTTAAGAGCGTCTTGATATTGCTTTCTT
GTCACACTCCTTGCGAGTGTGTGGATTGAAAT

>NZ_CP009709|7|4|2785593-2786680|CRT
GTCACACTCCTCGTGAGTGTGTGGATTGAAAT	AACATCACCCAAAAAATTTTGCCACCAACTACAA
GTCACACTCCTCGTGAGTGTGTGGATTGAAAT	TTGGTCGCGCACTCTAATTTTGATCCTCCTGAAG
GTCACACTCCTCGTGAGTGTGTGGATTGAAAT	ATTACCTGGCATGGATCCGTCTGTGTACGTTAA
GTCACACTCCTCGTGAGTGTGTGGATTGAAAT	ACGCAAAGTGGTTATACATCGGTTTCGATTCATT
GTCACACTCCTCGTGAGTGTGTGGATTGAAAT	CGCTGCAACTTCGTTAATATCAATCGTCAATTAA
GTCACACTCCTCGTGAGTGTGTGGATTGAAAT	AAGAAATCTTTTGTTCCTCCGAACTAAACAAATAC
GTCACACTCCTCGTGAGTGTGTGGATTGAAAT	GTCCAGCTTGACGCCTGGTCAATCCGTTCGGGC
GTCACACTCCTCGTGAGTGTGTGGATTGAAAT	GGGAATCAACAATGACAATTGATCTACCAATTAAA
GTCACACTCCTCGTGAGTGTGTGGATTGAAAT	GATAATATACTGTTGTGTACTATCTGAAGTGCTA
GTCACACTCCTCGTGAGTGTGTGGATTGAAAT	TGCTCCGTCCGTGGTTGCCCATCCGGTATTCCTGA
GTCACACTCCTCGTGAGTGTGTGGATTGAAAT	ATGGATAGCGACTATAAACTCCCAGAAATATAT
GTCACACTCCTCGTGAGTGTGTGGATTGAAAT	CGCCCTGTGCTGCACAGACTCATAGACTGCCGCAC
GTCACACTCCTCGTGAGTGTGTGGATTGAAAT	CACCTCATACAAAAAGTTAACAATAACCAAAGCC
GTCACACTCCTCGTGAGTGTGTGGATTGAAAT	TCAGCCAAAGTAACTTCGGGTTTAGGTTCTGGAT
GTCACACTCCTCGTGAGTGTGTGGATTGAAAT	TGCTCCGTTTCTTTTTCGGCCGGCTGTACTGTAA
GTCACACTCCTCGTGAGTGTGTGGATTGAAAT	AAATCGTTAAGAGCGTCTTGATATTGCTTTCTT
GTCACACTCCTTGCGAGTGTGTGGATTGAAAT

>NZ_CP009709|7|3|2785659-2786680|PILER-CR
GTCACACTCCTCGTGAGTGTGTGGATTGAAAT	TTGGTCGCGCACTCTAATTTTGATCCTCCTGAAG
GTCACACTCCTCGTGAGTGTGTGGATTGAAAT	ATTACCTGGCATGGATCCGTCTGTGTACGTTAA
GTCACACTCCTCGTGAGTGTGTGGATTGAAAT	ACGCAAAGTGGTTATACATCGGTTTCGATTCATT
GTCACACTCCTCGTGAGTGTGTGGATTGAAAT	CGCTGCAACTTCGTTAATATCAATCGTCAATTAA
GTCACACTCCTCGTGAGTGTGTGGATTGAAAT	AAGAAATCTTTTGTTCCTCCGAACTAAACAAATAC
GTCACACTCCTCGTGAGTGTGTGGATTGAAAT	GTCCAGCTTGACGCCTGGTCAATCCGTTCGGGC
GTCACACTCCTCGTGAGTGTGTGGATTGAAAT	GGGAATCAACAATGACAATTGATCTACCAATTAAA
GTCACACTCCTCGTGAGTGTGTGGATTGAAAT	GATAATATACTGTTGTGTACTATCTGAAGTGCTA
GTCACACTCCTCGTGAGTGTGTGGATTGAAAT	TGCTCCGTCCGTGGTTGCCCATCCGGTATTCCTGA
GTCACACTCCTCGTGAGTGTGTGGATTGAAAT	ATGGATAGCGACTATAAACTCCCAGAAATATAT
GTCACACTCCTCGTGAGTGTGTGGATTGAAAT	CGCCCTGTGCTGCACAGACTCATAGACTGCCGCAC
GTCACACTCCTCGTGAGTGTGTGGATTGAAAT	CACCTCATACAAAAAGTTAACAATAACCAAAGCC
GTCACACTCCTCGTGAGTGTGTGGATTGAAAT	TCAGCCAAAGTAACTTCGGGTTTAGGTTCTGGAT
GTCACACTCCTCGTGAGTGTGTGGATTGAAAT	TGCTCCGTTTCTTTTTCGGCCGGCTGTACTGTAA
GTCACACTCCTCGTGAGTGTGTGGATTGAAAT	AAATCGTTAAGAGCGTCTTGATATTGCTTTCTT
GTCACACTCCTTGCGAGTGTGTGGATTGAAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009709.1\|WP_029143118.1\|2793693_2794662_+\|LytR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224235
NZ_CP009709.1\|WP_013858355.1\|2795006_2795372_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009709.1\|WP_029142874.1\|2773274_2774258_-\|2-nitropropane-dioxygenase	unknown	unknown	gnl\|CDD\|240081
NZ_CP009709.1\|WP_042512562.1\|2796623_2797526_+\|transposase	unknown	unknown	gnl\|CDD\|273806
NZ_CP009709.1\|WP_029143067.1\|2789214_2790870_+\|APC-family-permease	unknown	unknown	gnl\|CDD\|223605
NZ_CP009709.1\|WP_042512461.1\|2786708_2787065_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009709.1\|WP_029143116.1\|2795509_2796427_-\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381318
NZ_CP009709.1\|WP_029143065.1\|2787825_2788032_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009709.1\|WP_029142873.1\|2774260_2774617_-\|cysteine-methyltransferase	unknown	unknown	gnl\|CDD\|377256
NZ_CP009709.1\|WP_017553300.1\|2774891_2775398_-\|DUF1648-domain-containing-protein	unknown	unknown	gnl\|CDD\|377929
NZ_CP009709.1\|WP_029142872.1\|2775659_2776991_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|225212
NZ_CP009709.1\|WP_017553298.1\|2777006_2777219_+\|DUF3006-domain-containing-protein	unknown	unknown	gnl\|CDD\|378598
NZ_CP009709.1\|WP_029713884.1\|2777830_2779981_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP009709.1\|WP_042512460.1\|2784151_2785075_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	cd09689_cas7_CAS-I-C	gnl\|CDD\|377458
NZ_CP009709.1\|WP_042512459.1\|2773062_2773311_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009709.1\|WP_029143128.1\|2782471_2784148_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	pfam09709_cas8c_CAS-I-C	gnl\|CDD\|378245
NZ_CP009709.1\|WP_042512462.1\|2791002_2793216_-\|peptidase	unknown	unknown	gnl\|CDD\|375438
NZ_CP009709.1\|WP_029143066.1\|2788028_2788547_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009709.1\|WP_029143117.1\|2794688_2794874_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009709.1\|WP_042512332.1\|2780562_2781972_-\|ISLre2-family-transposase	unknown	unknown	gnl\|CDD\|284250

Protein	Function_ID	Function_description	E-value
NZ_CP009709.1\|WP_029143118.1\|2793693_2794662_+\|LytR-family-transcriptional-regulator	gnl\|CDD\|224235	COG1316, LytR, Transcriptional regulator [Transcription].	8.31061e-43
NZ_CP009709.1\|WP_029143067.1\|2789214_2790870_+\|APC-family-permease	gnl\|CDD\|223605	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism].	1.7308e-59
NZ_CP009709.1\|WP_029142874.1\|2773274_2774258_-\|2-nitropropane-dioxygenase	gnl\|CDD\|240081	cd04730, NPD_like, 2-Nitropropane dioxygenase (NPD), one of the nitroalkane oxidizing enzyme families, catalyzes oxidative denitrification of nitroalkanes to their corresponding carbonyl compounds and nitrites. NDP is a member of the NAD(P)H-dependent flavin oxidoreductase family that reduce a range of alternative electron acceptors. Most use FAD/FMN as a cofactor and NAD(P)H as electron donor. Some contain 4Fe-4S cluster to transfer electron from FAD to FMN.	7.64866e-97
NZ_CP009709.1\|WP_029143116.1\|2795509_2796427_-\|aldo/keto-reductase	gnl\|CDD\|381318	cd19092, AKR_BsYcsN_EcYdhF-like, Bacillus subtilis YcsN, Escherichia coli YdhF and similar proteins. Bacillus subtilis YcsN and Escherichia coli YdhF are prototypes of this family. They are uncharacterized aldo/keto reductase family oxidoreductases.	2.2618e-146
NZ_CP009709.1\|WP_042512562.1\|2796623_2797526_+\|transposase	gnl\|CDD\|273806	TIGR01784, Uncharacterized_protein_pSLT051, conserved hypothetical protein (putative transposase or invertase). Several lines of evidence suggest that members of this family (loaded as a fragment mode model to find part-length matches) are associated with transposition, inversion, or recombination. Members are found in small numbers of genomes, but in large copy numbers in many of those species, including over 30 full length and fragmentary members in Treponema denticola. The strongest similarities are usually within rather than between species. PSI-BLAST shows similarity to proteins designated as possible transposases, DNA invertases (resolvases), and recombinases. In the oral pathogenic spirochete Treponema denticola, full-length members are often found near transporters or other membrane proteins. This family includes members of the putative transposase family pfam04754.	9.05883e-10
NZ_CP009709.1\|WP_029142873.1\|2774260_2774617_-\|cysteine-methyltransferase	gnl\|CDD\|377256	pfam04237, YjbR, YjbR. YjbR has a CyaY-like fold.	8.61755e-27
NZ_CP009709.1\|WP_017553300.1\|2774891_2775398_-\|DUF1648-domain-containing-protein	gnl\|CDD\|377929	pfam07853, DUF1648, Protein of unknown function (DUF1648). Members of this family are hypothetical proteins expressed by either bacterial or archaeal species. Some of these are annotated as being transmembrane proteins, and in fact many of these sequences contain a high proportion of hydrophobic residues.	5.2847e-10
NZ_CP009709.1\|WP_029142872.1\|2775659_2776991_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|225212	COG2333, ComEC, Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only].	2.58528e-81
NZ_CP009709.1\|WP_017553298.1\|2777006_2777219_+\|DUF3006-domain-containing-protein	gnl\|CDD\|378598	pfam11213, DUF3006, Protein of unknown function (DUF3006). This family of proteins has no known function.	2.18383e-20
NZ_CP009709.1\|WP_029713884.1\|2777830_2779981_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	5.9407e-50
NZ_CP009709.1\|WP_042512460.1\|2784151_2785075_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl\|CDD\|377458	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7. CRISPR-associated protein Cas7 is one of the components of the type I-B cascade-like antiviral defense complex. In Haloferax volcanii, Cas5, Cas6 and Cas7 form a small complex that aids the stability of CRISPR-derived RNA.	4.25251e-125
NZ_CP009709.1\|WP_029143128.1\|2782471_2784148_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl\|CDD\|378245	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1). CRISPR loci appear to be mobile elements with a wide host range. This entry represents proteins that tend to be found near CRISPR repeats. The species range, so far, is exclusively bacterial and mesophilic, although CRISPR loci are particularly common among the archaea and thermophilic bacteria. Clusters of short DNA repeats with nonhomologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins.	2.77272e-124
NZ_CP009709.1\|WP_042512462.1\|2791002_2793216_-\|peptidase	gnl\|CDD\|375438	pfam17936, Big_6, Bacterial Ig domain. This domain is found in a wide variety of extracellular bacterial proteins often in multiple tandem copies.	3.57394e-12
NZ_CP009709.1\|WP_042512332.1\|2780562_2781972_-\|ISLre2-family-transposase	gnl\|CDD\|284250	pfam06782, UPF0236, Uncharacterized protein family (UPF0236).	6.3488e-44

>NZ_CP009709.1|WP_042512460.1|2784151_2785075_+|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MNINSIIDPNKRYDFVLVFDVTDGNPNGDPDAGNLPRIDPETMQGIVTDVAIKRKIRDYIYLTRGHLEGFDIYVKHRGILTKEQKKAYEQLEKQENDDSPKTVKDARQWMCEHYFDTRMFGAVMSTKKFNAGQVRGAVQLTFARSVDPIFPAESSITRVALTNADDIKSGKATDEEARTGQMGRKAYVPYGLYIAYGFYTPSFAVQTGVREEDLKGLWESLINMWDLDHSASRGRMACRGLYVFSHESYLGNAPSNQLFEKIEIHRIDHSKVARSYKDYTVVFDEKMPEGVTLYKIVNSFKDVKIVN
>NZ_CP009709.1|WP_029143128.1|2782471_2784148_+|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MYMRRLVEFAEQHANDLPPVGYARRSYQWFVVITHDDRFEFIQADRGEQRVIPNRSRASGVSPILLTDKAEYVFKLPKNPANAKRAAECHLAYMKLLKECCEATRNELVQKIVQILERQDWQIPDGMKSTDVILFRTEAGDFPHEDNKVKKFWEDFLIKNSSKEENDSVCFICGRSAPAVKRHTIEFSVGKERTKLISANESAYLSYGLENSEIAPTCFECEQKYGQALSYLLRKYANKKQHGGPHMMEIGNVTYVYWARQNDPETTSMFTFLSDPDPVAVRRILSSPFKRAENHGSLDRICILALSANKARMVVRDYAEPPVWKVKNQIRQFFDAQQIVGAPKPASIYLLAACMYRDGRKEMQKEDVQDWMNWALYGKRLSERIVAKIVRRIQARGGMTWIHAAAIRSWLISQNKEEWTVDLDHARITPPYLCGRLFAVLEAVQYEAVKGNETIASRFYAAASSTPRTIFGLLMRNSKWHLSKISKENKGYEVRYQQRIQLITGQLKEFPAVLDLQGQAEFALGYYHERQDIYKKKENMPADAANVSDLNKTVVEGE
>NZ_CP009709.1|WP_042512332.1|2780562_2781972_-|ISLre2-family-transposase
MDIISIIARLLKDTKSLIEFEEQVKILIQNAFTQWVGEIFETLDKTIKQKKLEDGWEYCRSDNRSIQFLFGNVTFKRSLMHDQKGNSHYPLDEWLGLLPYQRYSPLVELKVAELASENTYREVADILKEWTAVSLSHTTVGNMVKHVGKTQAEADKALVEELEIAVSLPEGKKVDYLFSEADGVFVRGLKKKQSMEVHHAILYEGWQTNGKRVSLRQPTVIMTTEAIQTFWDEVQATAANTYSLEKTHVITNSDGGAGYTAERFQTAFSQSEFPVLNQLDTYHVAQAIIRTFGGGKSEIKEQIRKAIRTHDLDQFTLYLDTHESTLTDKKALKKIKEFRSYILKNWDRIFDWRDRVKNVPEGARGLGAMESNQRHISFRMKKRGMHWSELGAEAMVKIKQGILNGTLREVYLKHRSRSERKQRNLKQLIRMSQLLKQPVRPSVGVKHGSVALHSSSSSAMGHLSKILEY
>NZ_CP009709.1|WP_029713884.1|2777830_2779981_+|CRISPR-associated-helicase/endonuclease-Cas3
MDEHMKGTYFQARRFSHTFDRYGITAIAAIAHDLGKKSGAFVQYLKADKKIRGSVQHAIGGAIALHDIMQRGVQDERMIMAAAIVAGHHTGMPDLNTVFDEKIPDAPQYLKTIPDLSQTEMQIIKDILKRFPGLPLGGKSDSKSSFAYKEMLMRMCFSALVDADFLDTERYFDYGKSIKRQGKAFSIHQLDEQLQNYMLELRMKGKDKEINRYRNEVYMACREAAKQPLFFRALVVPTGLGKTLASIAFALEQAKRFNKKRVIVALPFVNIIDQTAQKYQEVFGKASVLEQHSQLSYTDDKDEAMERARLAAENWDSFPIIVTTTVELFESLFSNRTSKVRKLHRLANSVIILDEFQKLPIHVLAPIFQALHLLMEHFNVTVVLCSATPLSFENAKLIGNMGTPIEICKNRNQLFASMKRVEYIRVEKPLTVSELVARMKEHPAALCILNTREDAFRVYREAIHQKLNGQHIYHLSNRMCPHHRKKVIEQIKGDLKNEKSILVIATSLVEAGVDFDFPAVFRAMAPLDSIVQAAGRSNREGKLEKGAVFIFELIGGGMPGGMYRKGTEQTRILLDHYSTAALHDPWIFEKYFRSLYSFGADDLLDSYGITNLKPFSFETADRLFQMIDQNTVSILCKNYQGEDGQIERLIRMYKEAPYLTKEWYREAQLFAVNEYVDSRFLKENQNQLEKVSEGWYIWHGGYDMKTGIMDMDEKGD
>NZ_CP009709.1|WP_017553298.1|2777006_2777219_+|DUF3006-domain-containing-protein
MKYIVDRIEGEFAVCEKDDRTTVDIRLSELPSGVQAGDVIIVEDGIPRIDRQLTKERKAQIKKLADELFE
>NZ_CP009709.1|WP_029142872.1|2775659_2776991_+|MBL-fold-metallo-hydrolase
MKINRTGAWFLLLFFMLFCSGCGQTQSANSQPAKEKQVQQVSTEKSESKADSKTVNKTDSHHKSTASLPKGKLKVYFFDVGQGDSILIQTPKGENVLIDGGNNDKGDDVVRYLRQLHVSQLDDVIATHPDADHIGGLDTVLENLKVKNVYAPRVVNTTRTYEDFLLAVKNSRLKIKQAKANVDLGLQGASMKFVGPVKDYHEEMNDWSAVVKLSYGEKGTFLFTGDAPIRSEEDMIATHQDLSSQVLKVGHHGSKTATSQAFLDAVKPKYAIISVAKVNSYGLPNDEVINRLKSNHIQIFRTDEMKTILAVTDGKSIEFQLVSSLTPNHSSSEVGNATASGKAAPPVKQPSQQATSNGTLQAKVDDQTPQQYGKINLMVTGLTGAAYQATFHYKSKDTVYQGTAGTPLPVRISRAAPGYEVRIDIKAVVKGKTYTTHTSFTPQ
>NZ_CP009709.1|WP_017553300.1|2774891_2775398_-|DUF1648-domain-containing-protein
MPNSRKRPKLKIPKTKSEWFWDIIGYLFFLGSIIFLASVWGKLPEKVPGHYDAAGRVDRWGSKWELLILPGVGAILALLMQVLEKFPHIYNYPERLNALNAKQFYVHSRKLLNQLKNICLIFFALILLESIGIAMGWDNGFGKWFLPIIIIGIGIPIVLGIVTQRKIK
>NZ_CP009709.1|WP_029142873.1|2774260_2774617_-|cysteine-methyltransferase
MKTREDAIHYCLKLENTYEDYPFKDKNWTLMRHKKNKKVFAWIFERNGHIWINVKGENGWLDFYRRKYHAVVPAYHLNKEHWNSVILDGTVPEEEICDMIRQSYHLTKKKGIQSNRSR
>NZ_CP009709.1|WP_029142874.1|2773274_2774258_-|2-nitropropane-dioxygenase
MRTRITEILKIKYPIIQGGLAYLGYAELAAAVSNAGGLGQITAATLRTPEKLRNAIHKVRKLTGKPFGVNFAIARYNGRYEELLEVAIEEKVPAISISGGNPQPVFERIKGENIRTLVLVAGTRQAQKAEQLGADAVIAVGQEGGGHLGRDDIGGMVLIPRVADEVSVPVIAGGGIGDGRGLLAALALGAEGIQMGTRFIATKECIHAHEKYQQTIVHAKETDTVVIKKTLGAPGRVLKNRFALNIMEREQEGASYEGLKEMISGSANCNYIYDGNEEKGYAWAGQVVGLIHTIPTVQELFDEMMHTAEKGLSRLDHIMKEQTHRSS
>NZ_CP009709.1|WP_042512459.1|2773062_2773311_+|hypothetical-protein
MDIISRIAGFGKDTKSLIEFEEHSDPGDSGMGKMRNLPKMDLWQIFSRGVNFSPTKRVLGREPRQVCQSLLHDDLWVCSFII
>NZ_CP009709.1|WP_042512461.1|2786708_2787065_+|hypothetical-protein
MGKVLEEQQQQKEQRKKEELLKIEQEQALREQQEAEARLAAMSKEERLLFAIQSLTESQADLEKSKSELYEEVIAQQNQEAALALRQYWEKTGQWKVNKKKKKQYDKVLSIKKLLNIE
>NZ_CP009709.1|WP_029143065.1|2787825_2788032_-|hypothetical-protein
MNTRHETRRQGTEPGFRLLPPDLMPARKRRSGGLLLRFEHIKLLDTHYLQLVANESWSTLDALTPGHA
>NZ_CP009709.1|WP_029143066.1|2788028_2788547_-|hypothetical-protein
MQITVAEARLLKNAVSKKLHDLIQDRSQIAYVEFEKGEEYTPHARTFQVVSAEIQQVRNHYRAVTKALAASNLRTTIEWKGEKISIVEALELVKQLRAEAEMLQEFGNSQQVERIARGAFDANVVYKKALFDPPAVKKQAEKIEKEANRLSILIDKANFNAAVDLDFVEEYQ
>NZ_CP009709.1|WP_029143067.1|2789214_2790870_+|APC-family-permease
MNMMHRKLGTFALTMTGLGSIIGSGWLFGAWKAATIAGPAAIFAWVIGMVVILFIALSYSELGAMFPVAGGMVKYTQYSHGSFVGFLAAWANWIAIVSVIPSEAMASVQYMSSWHWSWAQSLAHNGMLTPKGLGLASLLLLIYFFLNYWAVSLFARVNSLITIFKIVIPGLTIFALLIVGFHGGNFTYGHAFAPYGWSSVLTAVATSGIVFAFNGFQSPINMAGEARKPGRSIPIAVVGSVLIATVIYVLLQIAFIGGVSPSVLAHGWNHLNFNSPFADLAIALNINWLVIVLYLDAFVSPSGTGTTYTATTARMLYGMEKNGYLPRFIGKLHPVYGIPRPAMFVNLVICFIFLFVFKGWGSLAEVISVATLISYITGPVTVMALRKTAGYLYRPLQVKGMQIIAPCGFIFASLTLYWARWPLTGEVFLIIMIGLPIYFYYQAKRKWQSFSKNFKSGIWMVAYLIVMMGISYFGSEKFGGLNMIPYGWDMVLIAFVSLGFYIWAVKSGYETPDLLEAAKLNKALKEHDMGVDDDENGNGKRNPAYSTDWPH
>NZ_CP009709.1|WP_042512462.1|2791002_2793216_-|peptidase
MKVIKKTIYLVLAIALILPALVLQTGHASASTTQTLNFNTTVTNTISNKNAEQVYKITLPSAGTVKVNLNSYIEAVILDLTDENGESVWGYSRDIYDGSASTPKQWSDQADLEAGIYYIKISQSSYHTGKYDLKVGFNTAGNNETEPNNGTSQAQPITLNTKKINGFLSLNDDTDCYKFILKQAGTIDVHVDSNIYDASLDLLDESGNDVWGDEDIYGGSSQTPKQWSKSVDLEAGTYYIKISNSSGYTGKYNLYVNYTPAGNNEVEPNNGTSQAQELSNGQKVTGFLSWSDDTDVYKVNLPKAGNLKIRLDSSIDWAYVDLIDANGNNIWDEESVYDGTKETPKQWMKDADLEAGTYYIKIHSPETGTYHLSTWFTAAGNNESEPNNGTTQAQQISLNTQKITGFLSESDHTDCYKFTLPKAVKVTMNVDFSMKGVDLHLTNSKGTALWDDHIYDGSIETPEQWNKSESLPAGTYYLKISSDYNTGKYVLSVNAPLYPSAPSINTVSTNSTSVSGKTDANCTVYVKAGSKTYKGKSNNKGDYKVSIPKQKAGTKIYVYATNTYGKSGTKVTTVGSPAATPSVNTVSNKSTFVSGKTSKSSTVHVKIGSKTYKGKSNSKGDYKVSIPKQKAGTKIYVYATNTYGKSGTKSVTVVDRIAPSTPSVNTVSHTSRYITGKTEAYATVTAYTGSKKIGSAKADKHGSYKIKISPKKKGTAVKVKATDKSGNSSGYRTVKVK
>NZ_CP009709.1|WP_029143118.1|2793693_2794662_+|LytR-family-transcriptional-regulator
MKKLRIFLSILLAVVVLGGGVAYFAYQKLQPENHFKNVPTVSKTRNNPGSQGTTTPKMKENVFNVLLLGSDERKGQKVGHSDSIILLHVDLNKHKYNMASIPRDTRVYLDGYGYTKLTSVQYIKQATGGTTAGIKAAVNSISQLTGIPVNYYVETNYEGLQSMVDALGTIDVDVPFDVKLTHPWYPENNGKVIAQGTQALDGEMVTELVHERYSLKNVDYDRQLLQAKVLIGIAKTALQPKNLTKLPKLVDKSSDFVIATNMSKTDIASLGLLVKNLNTDKQVTYYQLKGTSKSMYDDILKNNNSEIVLDQTALKKTMKHFE
>NZ_CP009709.1|WP_029143117.1|2794688_2794874_+|hypothetical-protein
MHNGAENKWGQFRFQTNFIHLNFLESERPEKAAIYFAWKINRLLRKLIGLITFSVCKGPVF
>NZ_CP009709.1|WP_013858355.1|2795006_2795372_+|hypothetical-protein
MATILYAVFIAIALYVLNGMAFMKLAQKAGRGDIAWMAWVPVCNVIQQLLLIKKSGWWVLILLVPVVNFIFIIFWQVKLLQAFGKHGAYVLLYIFIPIVYQILWIVWAFSDETKYVEREAV
>NZ_CP009709.1|WP_029143116.1|2795509_2796427_-|aldo/keto-reductase
MNHINLGKSGILGSEVALGCMRMNALSEKEAQTMIETAVEHGINFFDHADIYGKGESEKIFANALKNSSIKREDIILQSKCGIGDKMYDFSKSHILQAVDGILERLQTDYLDILLLHRPDPLMEPEEVAEAFSELQDAGKVRQFGVSNFHPYQVELVQKFVSQKLIVNQLQFSIAHTGMIDFGMHVNMKDERSIDHDGGILEYSRLHDITIQAWSPFQYGFFEGVFIDDPKFPELNEKLGQLAQAQGVSKEAVATAWILRHPAKIQVIAGTMNPERLKKITEASKVSLTRRDWYDIYFAAGNDLP
>NZ_CP009709.1|WP_042512562.1|2796623_2797526_+|transposase
MELVMEKQAGYNVHDRLFKELIQNFFKEFMEAFFPDVSADLDYRRVRFLSQEQFTDFPGGEQKRVDILAETKVKGKDTVILIHVEPQSYYQKLFPERLFRYYMMISLRHRKPVLPIAVFSYEEKTETPDTYTFAFHNIEILRFHYLSIHLIKKNWRDYIRSNNPVAAALLSKMGYTKKERVQVKLEFLRMLARMELDPAKMRLLYGFFDFYLKLNEKEEAEVMENIKMLDPDEAEQVLKLPNSYFDRGYRKGKEEGEEKLKRFIANLLKNQVDLKIIAQASGLSEEEILKIKRQIEGEKH

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Identity
NZ_CP009709_4	4.43\|1539473\|34\|NZ_CP009709\|PILER-CR,CRISPRCasFinder,CRT	1539473-1539506	34	NZ_CP009709.1	2446219-2446252	1.0
NZ_CP009709_4	4.43\|1539473\|34\|NZ_CP009709\|PILER-CR,CRISPRCasFinder,CRT	1539473-1539506	34	NZ_CP009709.1	2503537-2503570	1.0
NZ_CP009709_6	6.19\|2585408\|35\|NZ_CP009709\|PILER-CR,CRISPRCasFinder,CRT	2585408-2585442	35	NZ_CP009709.1	2391044-2391078	1.0
NZ_CP009709_6	6.19\|2585408\|35\|NZ_CP009709\|PILER-CR,CRISPRCasFinder,CRT	2585408-2585442	35	NZ_CP009709.1	2448352-2448386	1.0
NZ_CP009709_7	7.11\|2786286\|33\|NZ_CP009709\|CRISPRCasFinder,CRT,PILER-CR	2786286-2786318	33	NZ_CP009709.1	2411590-2411622	1.0
NZ_CP009709_7	7.11\|2786286\|33\|NZ_CP009709\|CRISPRCasFinder,CRT,PILER-CR	2786286-2786318	33	NZ_CP009709.1	2468905-2468937	1.0

1. spacer 4.43|1539473|34|NZ_CP009709|PILER-CR,CRISPRCasFinder,CRT matches to position: 2446219-2446252, mismatch: 0, identity: 1.0

ggacaattgggaacgcctgctaacaaaattataa	CRISPR spacer
ggacaattgggaacgcctgctaacaaaattataa	Protospacer
**********************************

2. spacer 4.43|1539473|34|NZ_CP009709|PILER-CR,CRISPRCasFinder,CRT matches to position: 2503537-2503570, mismatch: 0, identity: 1.0

ggacaattgggaacgcctgctaacaaaattataa	CRISPR spacer
ggacaattgggaacgcctgctaacaaaattataa	Protospacer
**********************************

3. spacer 6.19|2585408|35|NZ_CP009709|PILER-CR,CRISPRCasFinder,CRT matches to position: 2391044-2391078, mismatch: 0, identity: 1.0

ttaaaaaagctggagtaaggcatatccgcctgcac	CRISPR spacer
ttaaaaaagctggagtaaggcatatccgcctgcac	Protospacer
***********************************

4. spacer 6.19|2585408|35|NZ_CP009709|PILER-CR,CRISPRCasFinder,CRT matches to position: 2448352-2448386, mismatch: 0, identity: 1.0

ttaaaaaagctggagtaaggcatatccgcctgcac	CRISPR spacer
ttaaaaaagctggagtaaggcatatccgcctgcac	Protospacer
***********************************

5. spacer 7.11|2786286|33|NZ_CP009709|CRISPRCasFinder,CRT,PILER-CR matches to position: 2411590-2411622, mismatch: 0, identity: 1.0

atggatagcgactataaactcccagaaatatat	CRISPR spacer
atggatagcgactataaactcccagaaatatat	Protospacer
*********************************

6. spacer 7.11|2786286|33|NZ_CP009709|CRISPRCasFinder,CRT,PILER-CR matches to position: 2468905-2468937, mismatch: 0, identity: 1.0

atggatagcgactataaactcccagaaatatat	CRISPR spacer
atggatagcgactataaactcccagaaatatat	Protospacer
*********************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP009709_3	3.1\|1138365\|55\|NZ_CP009709\|CRISPRCasFinder	1138365-1138419	55	NZ_LR134399	Listeria monocytogenes strain NCTC7974 plasmid 2, complete sequence	57355-57409	5	0.909
NZ_CP009709_3	3.1\|1138365\|55\|NZ_CP009709\|CRISPRCasFinder	1138365-1138419	55	NZ_CP015440	Anoxybacillus amylolyticus strain DSM 15939 plasmid pDSM15939_2, complete sequence	64784-64838	6	0.891
NZ_CP009709_4	4.59\|1540528\|33\|NZ_CP009709\|PILER-CR,CRISPRCasFinder,CRT	1540528-1540560	33	NZ_CP009650	Bacillus pseudomycoides strain BTZ plasmid pBTZ_1, complete sequence	45500-45532	6	0.818
NZ_CP009709_4	4.59\|1540528\|33\|NZ_CP009709\|PILER-CR,CRISPRCasFinder,CRT	1540528-1540560	33	NZ_CP007625	Bacillus pseudomycoides strain 219298 plasmid unnamed, complete sequence	181939-181971	6	0.818
NZ_CP009709_4	4.77\|1541706\|32\|NZ_CP009709\|PILER-CR,CRISPRCasFinder,CRT	1541706-1541737	32	MN176224	Bacillus phage 031MP002, complete genome	26027-26058	6	0.812
NZ_CP009709_4	4.77\|1541706\|32\|NZ_CP009709\|PILER-CR,CRISPRCasFinder,CRT	1541706-1541737	32	MN176222	Bacillus phage 022DV001, complete genome	25907-25938	6	0.812
NZ_CP009709_4	4.77\|1541706\|32\|NZ_CP009709\|PILER-CR,CRISPRCasFinder,CRT	1541706-1541737	32	MN176229	Bacillus phage 055SW001, complete genome	25796-25827	6	0.812
NZ_CP009709_4	4.77\|1541706\|32\|NZ_CP009709\|PILER-CR,CRISPRCasFinder,CRT	1541706-1541737	32	MN176223	Bacillus phage 031MP003, complete genome	26018-26049	6	0.812
NZ_CP009709_4	4.77\|1541706\|32\|NZ_CP009709\|PILER-CR,CRISPRCasFinder,CRT	1541706-1541737	32	MN176225	Bacillus phage 031MP004, complete genome	25789-25820	6	0.812
NZ_CP009709_3	3.1\|1138365\|55\|NZ_CP009709\|CRISPRCasFinder	1138365-1138419	55	NZ_CP015439	Anoxybacillus amylolyticus strain DSM 15939 plasmid pDSM15939_1, complete sequence	255881-255935	7	0.873
NZ_CP009709_1	1.1\|1041464\|34\|NZ_CP009709\|CRISPRCasFinder	1041464-1041497	34	NZ_CP018229	Rhizobium leguminosarum strain Vaf-108 plasmid unnamed1, complete sequence	87416-87449	8	0.765
NZ_CP009709_1	1.1\|1041464\|34\|NZ_CP009709\|CRISPRCasFinder	1041464-1041497	34	NZ_CP016290	Rhizobium leguminosarum strain Vaf10 plasmid unnamed3, complete sequence	119192-119225	8	0.765
NZ_CP009709_3	3.1\|1138365\|55\|NZ_CP009709\|CRISPRCasFinder	1138365-1138419	55	NZ_CP010587	Bacillus megaterium Q3 plasmid p1, complete sequence	832-886	8	0.855
NZ_CP009709_3	3.1\|1138365\|55\|NZ_CP009709\|CRISPRCasFinder	1138365-1138419	55	NZ_CP023319	Bacillus megaterium strain A plasmid p2, complete sequence	75819-75873	8	0.855
NZ_CP009709_3	3.1\|1138365\|55\|NZ_CP009709\|CRISPRCasFinder	1138365-1138419	55	NZ_CP024037	Bacillus aryabhattai strain K13 plasmid unnamed2	10428-10482	8	0.855
NZ_CP009709_3	3.1\|1138365\|55\|NZ_CP009709\|CRISPRCasFinder	1138365-1138419	55	NZ_CP026740	Bacillus megaterium strain YC4-R4 plasmid unnamed4	70775-70829	8	0.855
NZ_CP009709_3	3.1\|1138365\|55\|NZ_CP009709\|CRISPRCasFinder	1138365-1138419	55	NC_017139	Bacillus megaterium WSH-002 plasmid WSH-002_p1, complete sequence	1329-1383	8	0.855
NZ_CP009709_3	3.1\|1138365\|55\|NZ_CP009709\|CRISPRCasFinder	1138365-1138419	55	NC_020451	Vibrio coralliilyticus strain ATCC BAA-450 plasmid, complete sequence	1971-2025	8	0.855
NZ_CP009709_4	4.26\|1538353\|34\|NZ_CP009709\|PILER-CR,CRISPRCasFinder,CRT	1538353-1538386	34	NZ_CP024772	Bacillus thuringiensis LM1212 plasmid pLM1, complete sequence	30933-30966	8	0.765
NZ_CP009709_4	4.55\|1540265\|34\|NZ_CP009709\|PILER-CR,CRISPRCasFinder,CRT	1540265-1540298	34	NZ_KP688397	Vibrio parahaemolyticus strain V36 plasmid pVPH1, complete sequence	6740-6773	8	0.765
NZ_CP009709_4	4.55\|1540265\|34\|NZ_CP009709\|PILER-CR,CRISPRCasFinder,CRT	1540265-1540298	34	KX957970	Vibrio parahaemolyticus plasmid pVPS43, complete sequence	158772-158805	8	0.765
NZ_CP009709_4	4.55\|1540265\|34\|NZ_CP009709\|PILER-CR,CRISPRCasFinder,CRT	1540265-1540298	34	KX957968	Vibrio alginolyticus plasmid pVAS19, complete sequence	157838-157871	8	0.765
NZ_CP009709_4	4.55\|1540265\|34\|NZ_CP009709\|PILER-CR,CRISPRCasFinder,CRT	1540265-1540298	34	KX957969	Vibrio alginolyticus plasmid pVAS114, complete sequence	162647-162680	8	0.765
NZ_CP009709_4	4.55\|1540265\|34\|NZ_CP009709\|PILER-CR,CRISPRCasFinder,CRT	1540265-1540298	34	NZ_CP014052	Vibrio alginolyticus strain FDAARGOS_108 plasmid unnamed1, complete sequence	72253-72286	8	0.765
NZ_CP009709_4	4.55\|1540265\|34\|NZ_CP009709\|PILER-CR,CRISPRCasFinder,CRT	1540265-1540298	34	NZ_CP034301	Vibrio parahaemolyticus strain 20160303005-1 plasmid pVPSD2016-2, complete sequence	27528-27561	8	0.765
NZ_CP009709_1	1.1\|1041464\|34\|NZ_CP009709\|CRISPRCasFinder	1041464-1041497	34	NC_015727	Cupriavidus necator N-1 plasmid pBB1, complete sequence	495043-495076	9	0.735
NZ_CP009709_4	4.14\|1537560\|34\|NZ_CP009709\|PILER-CR,CRISPRCasFinder,CRT	1537560-1537593	34	NC_020839	Rhodobacter phage RC1 genomic sequence	27481-27514	9	0.735
NZ_CP009709_4	4.14\|1537560\|34\|NZ_CP009709\|PILER-CR,CRISPRCasFinder,CRT	1537560-1537593	34	NC_020866	Rhodovulum phage RS1 genomic sequence	12256-12289	9	0.735
NZ_CP009709_4	4.26\|1538353\|34\|NZ_CP009709\|PILER-CR,CRISPRCasFinder,CRT	1538353-1538386	34	NZ_CP007063	Fusobacterium nucleatum subsp. animalis 7_1 plasmid unnamed, complete sequence	2741-2774	9	0.735
NZ_CP009709_4	4.32\|1538747\|34\|NZ_CP009709\|PILER-CR,CRISPRCasFinder,CRT	1538747-1538780	34	CP011076	Brevibacillus laterosporus strain B9 plasmid unnamed2, complete sequence	1355397-1355430	9	0.735
NZ_CP009709_4	4.32\|1538747\|34\|NZ_CP009709\|PILER-CR,CRISPRCasFinder,CRT	1538747-1538780	34	NC_025012	Bacillus cereus plasmid pBC-Tim DNA, complete sequence	2809-2842	9	0.735
NZ_CP009709_3	3.1\|1138365\|55\|NZ_CP009709\|CRISPRCasFinder	1138365-1138419	55	NZ_CP033045	Bacillus foraminis strain Bac44 plasmid unnamed, complete sequence	483785-483839	10	0.818
NZ_CP009709_4	4.13\|1537494\|34\|NZ_CP009709\|PILER-CR,CRISPRCasFinder,CRT	1537494-1537527	34	NZ_KP738729	Aeromonas sp. Ne-1 plasmid pNe-1, complete sequence	8808-8841	10	0.706
NZ_CP009709_4	4.13\|1537494\|34\|NZ_CP009709\|PILER-CR,CRISPRCasFinder,CRT	1537494-1537527	34	MN694120	Marine virus AFVG_250M1160, complete genome	45192-45225	10	0.706
NZ_CP009709_4	4.26\|1538353\|34\|NZ_CP009709\|PILER-CR,CRISPRCasFinder,CRT	1538353-1538386	34	NC_010180	Bacillus mycoides KBAB4 plasmid pBWB401, complete sequence	290673-290706	10	0.706
NZ_CP009709_4	4.26\|1538353\|34\|NZ_CP009709\|PILER-CR,CRISPRCasFinder,CRT	1538353-1538386	34	NZ_CP031072	Bacillus mycoides strain BPN401 plasmid pl395, complete sequence	4353-4386	10	0.706
NZ_CP009709_4	4.59\|1540528\|33\|NZ_CP009709\|PILER-CR,CRISPRCasFinder,CRT	1540528-1540560	33	MN036262	Leviviridae sp. isolate H1_Bulk_29_scaffold_482 RNA-dependent RNA polymerase (H1Bulk29482_000001), hypothetical protein (H1Bulk29482_000002), and hypothetical protein (H1Bulk29482_000003) genes, complete cds	904-936	10	0.697
NZ_CP009709_4	4.73\|1541444\|33\|NZ_CP009709\|PILER-CR,CRISPRCasFinder,CRT	1541444-1541476	33	MH319766	Marine virus AG-345-P14 Ga0172274_13 genomic sequence	19416-19448	10	0.697
NZ_CP009709_6	6.12\|2584945\|35\|NZ_CP009709\|PILER-CR,CRISPRCasFinder,CRT	2584945-2584979	35	NZ_CP046333	Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3	676437-676471	10	0.714
NZ_CP009709_6	6.12\|2584945\|35\|NZ_CP009709\|PILER-CR,CRISPRCasFinder,CRT	2584945-2584979	35	NC_007974	Cupriavidus metallidurans CH34 megaplasmid, complete sequence	370780-370814	10	0.714
NZ_CP009709_4	4.64\|1540856\|34\|NZ_CP009709\|PILER-CR,CRISPRCasFinder,CRT	1540856-1540889	34	MT774411	CrAssphage cr273_1, complete genome	28023-28056	11	0.676
NZ_CP009709_4	4.64\|1540856\|34\|NZ_CP009709\|PILER-CR,CRISPRCasFinder,CRT	1540856-1540889	34	MT774410	CrAssphage cr272_1, complete genome	9493-9526	11	0.676
NZ_CP009709_7	7.15\|2786550\|34\|NZ_CP009709\|CRISPRCasFinder,CRT,PILER-CR	2786550-2786583	34	NZ_CP032322	Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence	460717-460750	11	0.676
NZ_CP009709_7	7.15\|2786550\|34\|NZ_CP009709\|CRISPRCasFinder,CRT,PILER-CR	2786550-2786583	34	NZ_CP022367	Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence	1895851-1895884	11	0.676
NZ_CP009709_7	7.15\|2786550\|34\|NZ_CP009709\|CRISPRCasFinder,CRT,PILER-CR	2786550-2786583	34	NZ_CP032340	Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence	1277611-1277644	11	0.676
NZ_CP009709_7	7.15\|2786550\|34\|NZ_CP009709\|CRISPRCasFinder,CRT,PILER-CR	2786550-2786583	34	NZ_CP032346	Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence	406911-406944	11	0.676
NZ_CP009709_7	7.15\|2786550\|34\|NZ_CP009709\|CRISPRCasFinder,CRT,PILER-CR	2786550-2786583	34	NZ_CP007794	Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence	663806-663839	11	0.676
NZ_CP009709_7	7.15\|2786550\|34\|NZ_CP009709\|CRISPRCasFinder,CRT,PILER-CR	2786550-2786583	34	NZ_CP012915	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence	854759-854792	11	0.676

1. spacer 3.1|1138365|55|NZ_CP009709|CRISPRCasFinder matches to NZ_LR134399 (Listeria monocytogenes strain NCTC7974 plasmid 2, complete sequence) position: , mismatch: 5, identity: 0.909

cgacaacagcttggaaggctgtggttttaccactaaactacacccgcatcaaagg	CRISPR spacer
cgacaacagcttggaaggctgtagttttaccactaaactacacccgcatagtaag	Protospacer
**********************.************************** . *.*

2. spacer 3.1|1138365|55|NZ_CP009709|CRISPRCasFinder matches to NZ_CP015440 (Anoxybacillus amylolyticus strain DSM 15939 plasmid pDSM15939_2, complete sequence) position: , mismatch: 6, identity: 0.891

cgacaacagcttggaaggctgtggttttaccactaaactacacccgcatcaaagg	CRISPR spacer
cgacatcagcttggaaggctgaggttttaccactaaactacacccgcataataat	Protospacer
***** *************** *************************** * *.

3. spacer 4.59|1540528|33|NZ_CP009709|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009650 (Bacillus pseudomycoides strain BTZ plasmid pBTZ_1, complete sequence) position: , mismatch: 6, identity: 0.818

-attcaagcttgcatcataaagatccactgtaaa	CRISPR spacer
cattctaattc-catcataaatatccactgtaaa	Protospacer
 **** *..*. ********* ************

4. spacer 4.59|1540528|33|NZ_CP009709|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007625 (Bacillus pseudomycoides strain 219298 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.818

-attcaagcttgcatcataaagatccactgtaaa	CRISPR spacer
cattctaattc-catcataaatatccactgtaaa	Protospacer
 **** *..*. ********* ************

5. spacer 4.77|1541706|32|NZ_CP009709|PILER-CR,CRISPRCasFinder,CRT matches to MN176224 (Bacillus phage 031MP002, complete genome) position: , mismatch: 6, identity: 0.812

gtcggg--agagtttacgactttaaaagtaacct	CRISPR spacer
--cgggttcgaatttactactttaaaagtaacgt	Protospacer
  ****   **.***** ************** *

6. spacer 4.77|1541706|32|NZ_CP009709|PILER-CR,CRISPRCasFinder,CRT matches to MN176222 (Bacillus phage 022DV001, complete genome) position: , mismatch: 6, identity: 0.812

gtcggg--agagtttacgactttaaaagtaacct	CRISPR spacer
--cgggttcgaatttactactttaaaagtaacgt	Protospacer
  ****   **.***** ************** *

7. spacer 4.77|1541706|32|NZ_CP009709|PILER-CR,CRISPRCasFinder,CRT matches to MN176229 (Bacillus phage 055SW001, complete genome) position: , mismatch: 6, identity: 0.812

gtcggg--agagtttacgactttaaaagtaacct	CRISPR spacer
--cgggttcgaatttactactttaaaagtaacgt	Protospacer
  ****   **.***** ************** *

8. spacer 4.77|1541706|32|NZ_CP009709|PILER-CR,CRISPRCasFinder,CRT matches to MN176223 (Bacillus phage 031MP003, complete genome) position: , mismatch: 6, identity: 0.812

gtcggg--agagtttacgactttaaaagtaacct	CRISPR spacer
--cgggttcgaatttactactttaaaagtaacgt	Protospacer
  ****   **.***** ************** *

9. spacer 4.77|1541706|32|NZ_CP009709|PILER-CR,CRISPRCasFinder,CRT matches to MN176225 (Bacillus phage 031MP004, complete genome) position: , mismatch: 6, identity: 0.812

gtcggg--agagtttacgactttaaaagtaacct	CRISPR spacer
--cgggttcgaatttactactttaaaagtaacgt	Protospacer
  ****   **.***** ************** *

10. spacer 3.1|1138365|55|NZ_CP009709|CRISPRCasFinder matches to NZ_CP015439 (Anoxybacillus amylolyticus strain DSM 15939 plasmid pDSM15939_1, complete sequence) position: , mismatch: 7, identity: 0.873

cgacaacagcttggaaggctgtggttttaccactaaactacacccgcatcaaagg	CRISPR spacer
cgacatcagcttggaaggctgaggttttaccactaaactacacccgcatattata	Protospacer
***** *************** ***************************   * .

11. spacer 1.1|1041464|34|NZ_CP009709|CRISPRCasFinder matches to NZ_CP018229 (Rhizobium leguminosarum strain Vaf-108 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.765

ggtcgaggagatcctgcccgaattgtcgaaagga	CRISPR spacer
gatcgaggagatcgcgcccgaattgtttggggga	Protospacer
*.*********** .***********. ...***

12. spacer 1.1|1041464|34|NZ_CP009709|CRISPRCasFinder matches to NZ_CP016290 (Rhizobium leguminosarum strain Vaf10 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.765

ggtcgaggagatcctgcccgaattgtcgaaagga	CRISPR spacer
gatcgaggagatcgcgcccgaattgtttggggga	Protospacer
*.*********** .***********. ...***

13. spacer 3.1|1138365|55|NZ_CP009709|CRISPRCasFinder matches to NZ_CP010587 (Bacillus megaterium Q3 plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.855

cgacaacagcttggaaggctgtggttttaccactaaactacacccgcatcaaagg	CRISPR spacer
cgacatcagcttggaaggctgaggttttaccactaaactacacccgcatatttta	Protospacer
***** *************** ***************************     .

14. spacer 3.1|1138365|55|NZ_CP009709|CRISPRCasFinder matches to NZ_CP023319 (Bacillus megaterium strain A plasmid p2, complete sequence) position: , mismatch: 8, identity: 0.855

cgacaacagcttggaaggctgtggttttaccactaaactacacccgcatcaaagg	CRISPR spacer
cgacatcagcttggaaggctgaggttttaccactaaactacacccgcatatttta	Protospacer
***** *************** ***************************     .

15. spacer 3.1|1138365|55|NZ_CP009709|CRISPRCasFinder matches to NZ_CP024037 (Bacillus aryabhattai strain K13 plasmid unnamed2) position: , mismatch: 8, identity: 0.855

cgacaacagcttggaaggctgtggttttaccactaaactacacccgcatcaaagg	CRISPR spacer
cgacatcagcttggaaggctgaggttttaccactaaactacacccgcatatttta	Protospacer
***** *************** ***************************     .

16. spacer 3.1|1138365|55|NZ_CP009709|CRISPRCasFinder matches to NZ_CP026740 (Bacillus megaterium strain YC4-R4 plasmid unnamed4) position: , mismatch: 8, identity: 0.855

cgacaacagcttggaaggctgtggttttaccactaaactacacccgcatcaaagg	CRISPR spacer
cgacatcagcttggaaggctgaggttttaccactaaactacacccgcatatttta	Protospacer
***** *************** ***************************     .

17. spacer 3.1|1138365|55|NZ_CP009709|CRISPRCasFinder matches to NC_017139 (Bacillus megaterium WSH-002 plasmid WSH-002_p1, complete sequence) position: , mismatch: 8, identity: 0.855

cgacaacagcttggaaggctgtggttttaccactaaactacacccgcatcaaagg	CRISPR spacer
cgacatcagcttggaaggctgaggttttaccactaaactacacccgcatatttta	Protospacer
***** *************** ***************************     .

18. spacer 3.1|1138365|55|NZ_CP009709|CRISPRCasFinder matches to NC_020451 (Vibrio coralliilyticus strain ATCC BAA-450 plasmid, complete sequence) position: , mismatch: 8, identity: 0.855

cgacaacagcttggaaggctgtggttttaccactaaactacacccgcatcaaagg	CRISPR spacer
catcatcagcttggaaggctgaggttttaccactaaactacacccgcattttagt	Protospacer
*. ** *************** ***************************.  **

19. spacer 4.26|1538353|34|NZ_CP009709|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024772 (Bacillus thuringiensis LM1212 plasmid pLM1, complete sequence) position: , mismatch: 8, identity: 0.765

gaggccag--gagaaaaaataaaaagattgaggaaa	CRISPR spacer
--aactagtaaagaaaaaatagaaagattgatgaaa	Protospacer
  ..*.**  .**********.********* ****

20. spacer 4.55|1540265|34|NZ_CP009709|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KP688397 (Vibrio parahaemolyticus strain V36 plasmid pVPH1, complete sequence) position: , mismatch: 8, identity: 0.765

agcaattccgccagccatcaccatttgcacgagc--	CRISPR spacer
agctattccgccagccatcccca--tacttgagtag	Protospacer
*** *************** ***  *.* .***.

21. spacer 4.55|1540265|34|NZ_CP009709|PILER-CR,CRISPRCasFinder,CRT matches to KX957970 (Vibrio parahaemolyticus plasmid pVPS43, complete sequence) position: , mismatch: 8, identity: 0.765

agcaattccgccagccatcaccatttgcacgagc--	CRISPR spacer
agctattccgccagccatcccca--tacttgagtag	Protospacer
*** *************** ***  *.* .***.

22. spacer 4.55|1540265|34|NZ_CP009709|PILER-CR,CRISPRCasFinder,CRT matches to KX957968 (Vibrio alginolyticus plasmid pVAS19, complete sequence) position: , mismatch: 8, identity: 0.765

agcaattccgccagccatcaccatttgcacgagc--	CRISPR spacer
agctattccgccagccatcccca--tacttgagtag	Protospacer
*** *************** ***  *.* .***.

23. spacer 4.55|1540265|34|NZ_CP009709|PILER-CR,CRISPRCasFinder,CRT matches to KX957969 (Vibrio alginolyticus plasmid pVAS114, complete sequence) position: , mismatch: 8, identity: 0.765

agcaattccgccagccatcaccatttgcacgagc--	CRISPR spacer
agctattccgccagccatcccca--tacttgagtag	Protospacer
*** *************** ***  *.* .***.

24. spacer 4.55|1540265|34|NZ_CP009709|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014052 (Vibrio alginolyticus strain FDAARGOS_108 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.765

agcaattccgccagccatcaccatttgcacgagc--	CRISPR spacer
agctattccgccagccatcccca--tacttgagtag	Protospacer
*** *************** ***  *.* .***.

25. spacer 4.55|1540265|34|NZ_CP009709|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034301 (Vibrio parahaemolyticus strain 20160303005-1 plasmid pVPSD2016-2, complete sequence) position: , mismatch: 8, identity: 0.765

agcaattccgccagccatcaccatttgcacgagc--	CRISPR spacer
agctattccgccagccatcccca--tacttgagtag	Protospacer
*** *************** ***  *.* .***.

26. spacer 1.1|1041464|34|NZ_CP009709|CRISPRCasFinder matches to NC_015727 (Cupriavidus necator N-1 plasmid pBB1, complete sequence) position: , mismatch: 9, identity: 0.735

ggtcgaggagatcctgcccgaattgtcgaaagga	CRISPR spacer
gcccgaggagatcctgccccagttgtcggctgcc	Protospacer
* .**************** *.******.  *

27. spacer 4.14|1537560|34|NZ_CP009709|PILER-CR,CRISPRCasFinder,CRT matches to NC_020839 (Rhodobacter phage RC1 genomic sequence) position: , mismatch: 9, identity: 0.735

atcatcgaacgcgaccaggaaggtgaggcatcgt----	CRISPR spacer
gccaccgaacgcgatcaggaaggtg----atcgcgaga	Protospacer
..**.*********.**********    ****.

28. spacer 4.14|1537560|34|NZ_CP009709|PILER-CR,CRISPRCasFinder,CRT matches to NC_020866 (Rhodovulum phage RS1 genomic sequence) position: , mismatch: 9, identity: 0.735

atcatcgaacgcgaccaggaaggtgaggcatcgt----	CRISPR spacer
gccaccgaacgcgatcaggaaggtg----atcgcgaga	Protospacer
..**.*********.**********    ****.

29. spacer 4.26|1538353|34|NZ_CP009709|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007063 (Fusobacterium nucleatum subsp. animalis 7_1 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

--gaggccaggagaaaaaataaaaagattgaggaaa	CRISPR spacer
ttttatctag--gaaaaaatataaagattgaagaaa	Protospacer
    . *.**  ********* *********.****

30. spacer 4.32|1538747|34|NZ_CP009709|PILER-CR,CRISPRCasFinder,CRT matches to CP011076 (Brevibacillus laterosporus strain B9 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.735

atataaagtaatgttataagtaataatcacaagt	CRISPR spacer
tgataaagtaatgttataaaaaataatggaattt	Protospacer
  *****************. ****** . *  *

31. spacer 4.32|1538747|34|NZ_CP009709|PILER-CR,CRISPRCasFinder,CRT matches to NC_025012 (Bacillus cereus plasmid pBC-Tim DNA, complete sequence) position: , mismatch: 9, identity: 0.735

atataaagtaatgttataagtaataatcacaagt	CRISPR spacer
atacaaagaaatgttataagtaatgttaattttt	Protospacer
***.**** ***************. * *.   *

32. spacer 3.1|1138365|55|NZ_CP009709|CRISPRCasFinder matches to NZ_CP033045 (Bacillus foraminis strain Bac44 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.818

cgacaacagcttggaaggctgtggttttaccactaaactacacccgcatcaaagg	CRISPR spacer
catcatcagcttggaaggctgaggttttaccactaaactacacccgcatggttaa	Protospacer
*. ** *************** *************************** .  ..

33. spacer 4.13|1537494|34|NZ_CP009709|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KP738729 (Aeromonas sp. Ne-1 plasmid pNe-1, complete sequence) position: , mismatch: 10, identity: 0.706

ctttgcagttgataatacagtgtattgggaaggt	CRISPR spacer
caagaaaattgataataaagtgttttgggaagca	Protospacer
*   . *.********* ***** ********

34. spacer 4.13|1537494|34|NZ_CP009709|PILER-CR,CRISPRCasFinder,CRT matches to MN694120 (Marine virus AFVG_250M1160, complete genome) position: , mismatch: 10, identity: 0.706

ctttgcagttgataatacagtgtattgggaaggt	CRISPR spacer
aagaactgaagatggtacagtgtattgggaaggt	Protospacer
    .* *  ***..*******************

35. spacer 4.26|1538353|34|NZ_CP009709|PILER-CR,CRISPRCasFinder,CRT matches to NC_010180 (Bacillus mycoides KBAB4 plasmid pBWB401, complete sequence) position: , mismatch: 10, identity: 0.706

gaggccaggagaaaaaataaaaagattgaggaaa	CRISPR spacer
aactaataaagaaaaaatagaaagattgatgaaa	Protospacer
.*     ..**********.********* ****

36. spacer 4.26|1538353|34|NZ_CP009709|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031072 (Bacillus mycoides strain BPN401 plasmid pl395, complete sequence) position: , mismatch: 10, identity: 0.706

gaggccaggagaaaaaataaaaagattgaggaaa	CRISPR spacer
aacaagtaaagaaaaaatagaaagattgatgaaa	Protospacer
.* .   ..**********.********* ****

37. spacer 4.59|1540528|33|NZ_CP009709|PILER-CR,CRISPRCasFinder,CRT matches to MN036262 (Leviviridae sp. isolate H1_Bulk_29_scaffold_482 RNA-dependent RNA polymerase (H1Bulk29482_000001), hypothetical protein (H1Bulk29482_000002), and hypothetical protein (H1Bulk29482_000003) genes, complete cds) position: , mismatch: 10, identity: 0.697

attcaagcttgcatcataaagatccactgtaaa	CRISPR spacer
acgatcgcttgcatcagaaagatcaactgttgc	Protospacer
*.    ********** ******* ***** .

38. spacer 4.73|1541444|33|NZ_CP009709|PILER-CR,CRISPRCasFinder,CRT matches to MH319766 (Marine virus AG-345-P14 Ga0172274_13 genomic sequence) position: , mismatch: 10, identity: 0.697

gtaaatacattcatgctataattaaatcataag	CRISPR spacer
agaaatacattcctgctttaattaaaaggcagt	Protospacer
. ********** **** ********  ..*.

39. spacer 6.12|2584945|35|NZ_CP009709|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046333 (Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3) position: , mismatch: 10, identity: 0.714

----gcatttccgccatggcctgtttttccgtggcgtgc	CRISPR spacer
cgtaacgt----gccatggcctgttcttccgtgacgtcg	Protospacer
    .*.*    *************.*******.***

40. spacer 6.12|2584945|35|NZ_CP009709|PILER-CR,CRISPRCasFinder,CRT matches to NC_007974 (Cupriavidus metallidurans CH34 megaplasmid, complete sequence) position: , mismatch: 10, identity: 0.714

----gcatttccgccatggcctgtttttccgtggcgtgc	CRISPR spacer
cgtaacgt----gccatggcctgttcttccgtgacgtcg	Protospacer
    .*.*    *************.*******.***

41. spacer 4.64|1540856|34|NZ_CP009709|PILER-CR,CRISPRCasFinder,CRT matches to MT774411 (CrAssphage cr273_1, complete genome) position: , mismatch: 11, identity: 0.676

aggatccgctacatctttagttactttgatgccg	CRISPR spacer
gttatctgctacatctttagttaatttatctacc	Protospacer
.  ***.**************** ***. .  *

42. spacer 4.64|1540856|34|NZ_CP009709|PILER-CR,CRISPRCasFinder,CRT matches to MT774410 (CrAssphage cr272_1, complete genome) position: , mismatch: 11, identity: 0.676

aggatccgctacatctttagttactttgatgccg	CRISPR spacer
gttatctgctacatctttagttaatttatctacc	Protospacer
.  ***.**************** ***. .  *

43. spacer 7.15|2786550|34|NZ_CP009709|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 11, identity: 0.676

tgctccgtttctttttcggccggctgtactgtaa	CRISPR spacer
cgctccgtttctctttcggccgcctctcagcccg	Protospacer
.***********.********* ** *    . .

44. spacer 7.15|2786550|34|NZ_CP009709|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 11, identity: 0.676

tgctccgtttctttttcggccggctgtactgtaa	CRISPR spacer
cgctccgtttctctttcggccgcctctcagcccg	Protospacer
.***********.********* ** *    . .

45. spacer 7.15|2786550|34|NZ_CP009709|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032340 (Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence) position: , mismatch: 11, identity: 0.676

tgctccgtttctttttcggccggctgtactgtaa	CRISPR spacer
cgctccgtttctctttcggccgcctctcagcccg	Protospacer
.***********.********* ** *    . .

46. spacer 7.15|2786550|34|NZ_CP009709|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 11, identity: 0.676

tgctccgtttctttttcggccggctgtactgtaa	CRISPR spacer
cgctccgtttctctttcggccgcctctcagcccg	Protospacer
.***********.********* ** *    . .

47. spacer 7.15|2786550|34|NZ_CP009709|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP007794 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence) position: , mismatch: 11, identity: 0.676

tgctccgtttctttttcggccggctgtactgtaa	CRISPR spacer
cgctccgtttctctttcggccgcctctcagcccg	Protospacer
.***********.********* ** *    . .

48. spacer 7.15|2786550|34|NZ_CP009709|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012915 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence) position: , mismatch: 11, identity: 0.676

tgctccgtttctttttcggccggctgtactgtaa	CRISPR spacer
cgctccgtttctctttcggccgcctctcagcccg	Protospacer
.***********.********* ** *    . .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1181969 : 1237587

Enterococcus_phage(18.18%)

transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_042512404.1\|1181969_1183088_-\|transposase	transposase	A0A288TXV8	Enterococcus_phage	2.8e-78	47.8
WP_029142657.1\|1183376_1184159_+	NAD(P)-dependent oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	2.1e-19	32.9
WP_029142656.1\|1184165_1184378_+	hypothetical protein	NA	NA	NA	NA
WP_017554802.1\|1184438_1184909_-	divergent PAP2 family protein	NA	NA	NA	NA
WP_029142655.1\|1184970_1186116_-	N-methyl-L-tryptophan oxidase	NA	NA	NA	NA
WP_029142654.1\|1186191_1187358_-	FAD-binding oxidoreductase	NA	NA	NA	NA
WP_029142653.1\|1187369_1188839_-	aldehyde dehydrogenase	NA	NA	NA	NA
WP_029142652.1\|1188853_1189783_-	ornithine cyclodeaminase	NA	NA	NA	NA
WP_029142651.1\|1190342_1191344_+	ion transporter	NA	NA	NA	NA
WP_013860095.1\|1191641_1192991_-	glucose-6-phosphate isomerase	NA	NA	NA	NA
WP_029142650.1\|1193147_1193378_+	DUF378 domain-containing protein	NA	NA	NA	NA
WP_019721421.1\|1193528_1193999_+	transcriptional regulator	NA	NA	NA	NA
WP_013860098.1\|1194310_1194697_-	general stress protein	NA	NA	NA	NA
WP_019721420.1\|1194965_1195175_+	XRE family transcriptional regulator	NA	NA	NA	NA
WP_029142649.1\|1195219_1195465_-	hypothetical protein	NA	NA	NA	NA
WP_017553439.1\|1195513_1196545_-	NADH:flavin oxidoreductase/NADH oxidase	NA	NA	NA	NA
WP_029142648.1\|1196742_1197600_+	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	1.3e-70	49.6
WP_019721419.1\|1197983_1198826_+	aldo/keto reductase	NA	NA	NA	NA
WP_029142647.1\|1199021_1200272_-	hypothetical protein	NA	NA	NA	NA
WP_019721417.1\|1200604_1200811_-	hypothetical protein	NA	NA	NA	NA
WP_013860105.1\|1200946_1201546_-	peptidyl-prolyl cis-trans isomerase	A0A2H4UTF4	Bodo_saltans_virus	1.5e-25	41.9
WP_073193868.1\|1201623_1201998_+	DUF4391 domain-containing protein	NA	NA	NA	NA
WP_042512405.1\|1202174_1203533_-\|transposase	transposase	NA	NA	NA	NA
WP_042512365.1\|1203677_1205183_+\|transposase	transposase	NA	NA	NA	NA
WP_035180281.1\|1205179_1205932_+	ATP-binding protein	A0A2L1IVB6	Escherichia_phage	2.1e-37	41.4
WP_014097075.1\|1206188_1207484_+\|transposase	DDE transposase	NA	NA	NA	NA
WP_080588416.1\|1208229_1208373_+	DUF4391 domain-containing protein	NA	NA	NA	NA
WP_029142479.1\|1208385_1210299_+	site-specific DNA-methyltransferase	A0A2K5B2C1	Erysipelothrix_phage	6.5e-123	43.1
WP_029142478.1\|1210302_1213257_+	type III restriction endonuclease subunit R	A0A2K5B2C2	Erysipelothrix_phage	8.8e-220	45.2
WP_013860108.1\|1214194_1215403_+	MFS transporter	NA	NA	NA	NA
WP_013860109.1\|1215469_1215856_-	esterase	NA	NA	NA	NA
WP_029142476.1\|1215955_1216318_+	hypothetical protein	NA	NA	NA	NA
WP_029142475.1\|1216392_1216587_-	hypothetical protein	NA	NA	NA	NA
WP_029142474.1\|1216647_1217769_-	spore gernimation protein KB	NA	NA	NA	NA
WP_029142473.1\|1217785_1218997_-	Ger(x)C family spore germination protein	NA	NA	NA	NA
WP_029142472.1\|1218993_1220652_-	spore germination protein	NA	NA	NA	NA
WP_029142471.1\|1220769_1220997_+	hypothetical protein	NA	NA	NA	NA
WP_029142470.1\|1221221_1222895_-	peptidase M17	NA	NA	NA	NA
WP_017552791.1\|1222969_1223584_-	hypothetical protein	A0A127AW72	Bacillus_phage	1.8e-13	38.9
WP_013860119.1\|1223815_1224133_-	membrane protein	NA	NA	NA	NA
WP_029142469.1\|1224213_1225434_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_029142468.1\|1225787_1226783_+	NAD(P)/FAD-dependent oxidoreductase	Q9JRK7	Streptococcus_phage	3.8e-34	53.2
WP_029142467.1\|1226827_1227046_-	hypothetical protein	NA	NA	NA	NA
WP_029713829.1\|1227090_1228122_-	hypothetical protein	NA	NA	NA	NA
WP_029713828.1\|1228123_1228939_-	intercellular adhesin biosynthesis polysaccharide N-deacetylase	NA	NA	NA	NA
WP_029142466.1\|1228922_1229237_-	intracellular adhesion protein D	NA	NA	NA	NA
WP_029713827.1\|1229200_1230445_-	poly-beta-1,6 N-acetyl-D-glucosamine synthase	NA	NA	NA	NA
WP_042512406.1\|1232233_1233346_-\|transposase	transposase	A0A288TXV8	Enterococcus_phage	3.3e-79	48.4
WP_003352379.1\|1233433_1233574_+	ribbon-helix-helix protein, CopG family	NA	NA	NA	NA
WP_013860122.1\|1233682_1234045_-	iron-sulfur cluster assembly accessory protein	A0A2H4N7M3	Lake_Baikal_phage	4.3e-20	51.5
WP_013860123.1\|1234191_1234536_-	DUF1462 domain-containing protein	NA	NA	NA	NA
WP_080775313.1\|1236171_1237587_+\|transposase	ISLre2 family transposase	NA	NA	NA	NA

DBSCAN-SWA_2

1261518 : 1329578

Tupanvirus(30.0%)

coat,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013860152.1\|1261518_1261863_+\|coat	spore coat protein	NA	NA	NA	NA
WP_080588400.1\|1261899_1263120_-	rod shape-determining protein RodA	NA	NA	NA	NA
WP_029142407.1\|1263288_1263609_+	thioredoxin	A0A2K9L3H4	Tupanvirus	1.2e-05	28.9
WP_080775314.1\|1264071_1265487_-\|transposase	ISLre2 family transposase	NA	NA	NA	NA
WP_080775315.1\|1265530_1266721_+\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	5.3e-83	43.4
WP_029142165.1\|1266942_1268382_-	phospholipase	NA	NA	NA	NA
WP_029142164.1\|1268907_1272072_+	AcrB/AcrD/AcrF family protein	S5VTK5	Leptospira_phage	1.9e-71	24.5
WP_029142163.1\|1272247_1273279_-	EAL domain-containing protein	NA	NA	NA	NA
WP_029142162.1\|1273483_1274977_+	catalase	A0A2K9L0T1	Tupanvirus	8.4e-94	46.2
WP_029142161.1\|1275245_1275824_-	undecaprenyl-diphosphatase	NA	NA	NA	NA
WP_029142160.1\|1275828_1276569_-	polysaccharide deacetylase family protein	NA	NA	NA	NA
WP_029142159.1\|1276544_1277819_-	1,2-diacylglycerol 3-glucosyltransferase	NA	NA	NA	NA
WP_029142158.1\|1278155_1279034_-	hypothetical protein	NA	NA	NA	NA
WP_029142157.1\|1279037_1279544_-	anti-sigma factor	NA	NA	NA	NA
WP_029142156.1\|1279548_1280082_-	RNA polymerase sigma24 factor	NA	NA	NA	NA
WP_029142155.1\|1280186_1280399_-	hypothetical protein	NA	NA	NA	NA
WP_029142154.1\|1280415_1281585_-	galactosyldiacylglycerol synthase	NA	NA	NA	NA
WP_019721373.1\|1281684_1281915_-	hypothetical protein	NA	NA	NA	NA
WP_029142153.1\|1282148_1284380_+	hypothetical protein	NA	NA	NA	NA
WP_029142152.1\|1284592_1286539_-	glycoside hydrolase	A0A160LKP9	Bacillus_phage	5.6e-05	36.8
WP_029142151.1\|1286989_1288006_-	biotin synthase BioB	NA	NA	NA	NA
WP_029142150.1\|1288214_1289186_-	sugar kinase	NA	NA	NA	NA
WP_035176231.1\|1289346_1290189_-	5-dehydro-4-deoxy-D-glucuronate isomerase	NA	NA	NA	NA
WP_029142148.1\|1290230_1291007_-	2-deoxy-D-gluconate 3-dehydrogenase	NA	NA	NA	NA
WP_029142147.1\|1291436_1292861_-	MFS transporter	NA	NA	NA	NA
WP_029142146.1\|1292929_1294342_-	glucuronate isomerase	NA	NA	NA	NA
WP_029142145.1\|1294376_1295867_-	altronate dehydratase	NA	NA	NA	NA
WP_029142144.1\|1295856_1297293_-	tagaturonate reductase	NA	NA	NA	NA
WP_029142143.1\|1297412_1298417_-	sugar kinase	NA	NA	NA	NA
WP_029142142.1\|1298409_1299087_-	bifunctional 2-keto-4-hydroxyglutarate aldolase/2-keto-3-deoxy-6-phosphogluconate aldolase	NA	NA	NA	NA
WP_029142141.1\|1299236_1300007_-	IclR family transcriptional regulator	NA	NA	NA	NA
WP_029142140.1\|1300325_1300754_+	SMI1/KNR4 family protein	NA	NA	NA	NA
WP_050996520.1\|1300854_1301229_+	hypothetical protein	NA	NA	NA	NA
WP_029142139.1\|1301652_1303206_+	ABC transporter ATP-binding protein	A0A2K9L3Z8	Tupanvirus	4.1e-59	29.4
WP_035181085.1\|1305700_1305913_+	hypothetical protein	NA	NA	NA	NA
WP_042512409.1\|1307427_1307823_+	hypothetical protein	NA	NA	NA	NA
WP_042512410.1\|1308009_1308783_-	ATPase AAA	NA	NA	NA	NA
WP_042512385.1\|1308803_1310186_-\|transposase	transposase	NA	NA	NA	NA
WP_080775331.1\|1310331_1310760_-	hypothetical protein	NA	NA	NA	NA
WP_052472240.1\|1311080_1311989_+\|transposase	transposase	NA	NA	NA	NA
WP_042512411.1\|1311985_1312711_+	ATP-binding protein	A0A059NT77	Lactococcus_phage	3.5e-37	40.3
WP_080775316.1\|1312758_1313109_-	hypothetical protein	NA	NA	NA	NA
WP_013860180.1\|1314236_1314701_-	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	1.7e-48	63.9
WP_029142770.1\|1314740_1317035_-	ribonuclease R	Q0GXV6	Lactococcus_phage	1.3e-90	40.2
WP_035176608.1\|1317062_1317809_-	carboxylesterase	NA	NA	NA	NA
WP_029142771.1\|1318004_1318238_-	preprotein translocase subunit SecG	NA	NA	NA	NA
WP_029142772.1\|1318464_1319760_-	phosphopyruvate hydratase	W6LP63	Streptococcus_phage	9.6e-171	71.5
WP_029142773.1\|1320154_1321690_-	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	NA	NA	NA	NA
WP_013860187.1\|1321682_1322444_-	triose-phosphate isomerase	NA	NA	NA	NA
WP_029142774.1\|1322470_1323655_-	phosphoglycerate kinase	NA	NA	NA	NA
WP_029142775.1\|1323745_1324753_-	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA
WP_029142776.1\|1324818_1325847_-	central glycolytic genes regulator	NA	NA	NA	NA
WP_029142777.1\|1325982_1326228_-	glutaredoxin family protein	NA	NA	NA	NA
WP_029142778.1\|1326427_1327762_-	RNA polymerase sigma-54 factor	NA	NA	NA	NA
WP_042512332.1\|1328168_1329578_-\|transposase	ISLre2 family transposase	NA	NA	NA	NA

DBSCAN-SWA_3

1618880 : 1684275

Bacillus_phage(16.67%)

integrase,transposase

attL 1604130:1604145|attR 1680485:1680500

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1604130:1604145	attL	NA	NA	NA	NA
WP_042512420.1\|1618880_1620446_+\|transposase	transposase	NA	NA	NA	NA
WP_080588441.1\|1620442_1620601_+	hypothetical protein	NA	NA	NA	NA
WP_029142670.1\|1621401_1622613_-	ornithine--oxo-acid transaminase	A0A1V0SKB7	Klosneuvirus	1.5e-29	28.1
WP_029142669.1\|1622778_1624125_+	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA
WP_029713861.1\|1624221_1625652_-	hypothetical protein	NA	NA	NA	NA
WP_029142667.1\|1625669_1627100_-	SAM-dependent methyltransferase	A0A220A2U4	Liberibacter_phage	2.9e-27	23.6
WP_029142666.1\|1627240_1627438_-	hypothetical protein	NA	NA	NA	NA
WP_029713860.1\|1627626_1630839_-	type I restriction-modification system endonuclease	Q5YA94	Bacillus_phage	9.2e-05	26.7
WP_042512421.1\|1631131_1631401_-	hypothetical protein	NA	NA	NA	NA
WP_029142664.1\|1631375_1632857_+	amino acid permease	NA	NA	NA	NA
WP_029142663.1\|1633038_1633692_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_029142662.1\|1633705_1634929_-	ABC transporter permease	NA	NA	NA	NA
WP_014097127.1\|1634925_1635030_-	hypothetical protein	NA	NA	NA	NA
WP_029142661.1\|1635026_1635752_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	9.2e-30	36.9
WP_029142660.1\|1636076_1636970_+	fructose bisphosphate aldolase	A0A0K0KVJ8	Prochlorococcus_phage	9.1e-11	28.4
WP_029142659.1\|1637642_1638242_+	hypothetical protein	NA	NA	NA	NA
WP_029142658.1\|1638370_1639228_-	aldose epimerase	NA	NA	NA	NA
WP_017553139.1\|1641950_1642346_-	(deoxy)nucleoside triphosphate pyrophosphohydrolase	NA	NA	NA	NA
WP_013860486.1\|1642470_1643391_-	restriction endonuclease	NA	NA	NA	NA
WP_029142631.1\|1643567_1646651_-	deoxyribonuclease HsdR	NA	NA	NA	NA
WP_050996454.1\|1646664_1647849_-	restriction endonuclease subunit S	E3T4D5	Cafeteria_roenbergensis_virus	6.0e-10	27.9
WP_029142624.1\|1647848_1650413_-	type I restriction-modification system subunit M	A0A2H4PQP4	Staphylococcus_phage	1.2e-108	44.4
WP_080564919.1\|1650657_1651038_-	SAM-dependent DNA methyltransferase	NA	NA	NA	NA
WP_013860490.1\|1651361_1651559_-	hypothetical protein	NA	NA	NA	NA
WP_014097083.1\|1651713_1652358_-	amino acid transporter	NA	NA	NA	NA
WP_029142626.1\|1652731_1653205_+	glutathione peroxidase	NA	NA	NA	NA
WP_029142627.1\|1653361_1653850_-	PTS glucose transporter subunit IIA	NA	NA	NA	NA
WP_029142628.1\|1654284_1655205_-	6-phospho-alpha-glucosidase	NA	NA	NA	NA
WP_013860496.1\|1656241_1656853_-	YqcI/YcgG family protein	NA	NA	NA	NA
WP_029142629.1\|1657129_1657705_-\|integrase	integrase	A0A1B1P7Y2	Bacillus_phage	8.4e-26	38.6
WP_014097067.1\|1657893_1660029_-	cadmium-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	0.0e+00	84.7
WP_042512422.1\|1662756_1664220_-\|transposase	transposase	NA	NA	NA	NA
WP_029142952.1\|1664784_1665687_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_029142951.1\|1665940_1667197_-	glutamate:protein symporter	NA	NA	NA	NA
WP_042512423.1\|1667529_1667847_+	hypothetical protein	NA	NA	NA	NA
WP_014097059.1\|1667803_1668280_-	anaerobic ribonucleoside-triphosphate reductase activating protein	A0A0A8WJI9	Clostridium_phage	1.3e-37	50.3
WP_029142950.1\|1668276_1670148_-	ribonucleoside-triphosphate reductase	A0A2R2ZH54	Clostridioides_phage	6.1e-158	45.7
WP_029142949.1\|1670869_1671949_-	hypothetical protein	NA	NA	NA	NA
WP_029142948.1\|1672763_1673909_-	glycerate kinase	W6LM47	Streptococcus_phage	1.1e-45	38.8
WP_035180312.1\|1676076_1677027_-\|transposase	transposase	NA	NA	NA	NA
WP_029143092.1\|1677409_1678024_-	DUF1775 domain-containing protein	NA	NA	NA	NA
WP_029143091.1\|1678075_1679722_-	copper resistance protein CopC	NA	NA	NA	NA
WP_029713924.1\|1680051_1680342_-	hypothetical protein	NA	NA	NA	NA
WP_013860842.1\|1681074_1682538_+\|transposase	transposase	NA	NA	NA	NA
1680485:1680500	attR	NA	NA	NA	NA
WP_013860842.1\|1682811_1684275_+\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_4

1703438 : 1772867

Bacillus_virus(22.22%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013858128.1\|1703438_1704749_+\|transposase	DDE transposase family protein	NA	NA	NA	NA
WP_029141850.1\|1705386_1706301_+	transporter	NA	NA	NA	NA
WP_019721568.1\|1706426_1707968_-	hydrolase	NA	NA	NA	NA
WP_017553067.1\|1708335_1708515_+	DUF2292 domain-containing protein	NA	NA	NA	NA
WP_029141851.1\|1708603_1709143_-	FMN reductase (NADPH)	NA	NA	NA	NA
WP_029141852.1\|1709163_1709916_-	aliphatic sulfonate ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	5.6e-30	36.6
WP_029141853.1\|1709930_1710689_-	alkanesulfonate transporter permease subunit	NA	NA	NA	NA
WP_029141854.1\|1710702_1711836_-	alkanesulfonate monooxygenase, FMNH(2)-dependent	NA	NA	NA	NA
WP_029141855.1\|1711850_1712837_-	sulfonate ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_017552293.1\|1713260_1714244_+	GMP reductase	G3MBI2	Bacillus_virus	1.6e-154	81.7
WP_029141856.1\|1714497_1716795_-	5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase	NA	NA	NA	NA
WP_013860534.1\|1717122_1717515_-	cytidine deaminase	NA	NA	NA	NA
WP_029141857.1\|1717585_1718233_-	deoxyribose-phosphate aldolase	NA	NA	NA	NA
WP_029141858.1\|1718259_1719561_-	pyrimidine-nucleoside phosphorylase	A0A0H3UZD4	Geobacillus_virus	8.5e-135	58.2
WP_029141859.1\|1719579_1720773_-	phosphopentomutase	NA	NA	NA	NA
WP_029141860.1\|1721226_1722180_-	DNA-directed RNA polymerase sigma-70 factor	NA	NA	NA	NA
WP_013860540.1\|1722506_1723208_+	purine-nucleoside phosphorylase	NA	NA	NA	NA
WP_029141861.1\|1723515_1724715_+	nucleoside permease	NA	NA	NA	NA
WP_029141862.1\|1724858_1725056_-	hypothetical protein	NA	NA	NA	NA
WP_029141863.1\|1725057_1726383_+	NCS2 family permease	NA	NA	NA	NA
WP_029141864.1\|1726653_1727301_-	pyroglutamyl-peptidase I	NA	NA	NA	NA
WP_029141865.1\|1727393_1728347_-	DUF979 domain-containing protein	NA	NA	NA	NA
WP_029141866.1\|1728343_1729033_-	DUF969 domain-containing protein	NA	NA	NA	NA
WP_029141867.1\|1729400_1730168_-	LamB/YcsF family protein	NA	NA	NA	NA
WP_029141868.1\|1730154_1731153_-	KipI antagonist	NA	NA	NA	NA
WP_017554682.1\|1731149_1731857_-	allophanate hydrolase subunit 1	NA	NA	NA	NA
WP_029141869.1\|1732613_1733819_+	MFS transporter	NA	NA	NA	NA
WP_029141870.1\|1733834_1734284_+	OsmC family peroxiredoxin	NA	NA	NA	NA
WP_019721589.1\|1734482_1735205_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.5e-32	39.0
WP_029141871.1\|1735197_1735857_-	amino acid ABC transporter permease	NA	NA	NA	NA
WP_029141872.1\|1735922_1736690_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_029141873.1\|1736814_1737987_-	amidohydrolase	NA	NA	NA	NA
WP_029141874.1\|1738293_1740171_-	molecular chaperone HtpG	A0A1V0SAD6	Catovirus	3.9e-96	34.8
WP_029141875.1\|1740538_1741954_+	terpenoid cyclase	NA	NA	NA	NA
WP_029141876.1\|1741960_1742716_+	DUF4430 domain-containing protein	NA	NA	NA	NA
WP_029141877.1\|1742728_1743292_+	ECF transporter S component	NA	NA	NA	NA
WP_029141878.1\|1743715_1744321_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_013860563.1\|1744365_1745487_-	FAD-binding oxidoreductase	NA	NA	NA	NA
WP_029141879.1\|1746371_1747394_-	alcohol dehydrogenase AdhP	A0A2K9L339	Tupanvirus	4.8e-24	24.2
WP_019721598.1\|1747594_1747960_+	hypothetical protein	NA	NA	NA	NA
WP_029141880.1\|1749935_1750286_-	DUF5082 domain-containing protein	NA	NA	NA	NA
WP_029141881.1\|1750805_1751636_+	hypothetical protein	NA	NA	NA	NA
WP_042512425.1\|1751873_1753421_+\|transposase	transposase	NA	NA	NA	NA
WP_080588442.1\|1753496_1753706_+	hypothetical protein	A0A1P8CWQ3	Bacillus_phage	4.8e-16	60.9
WP_042512426.1\|1753931_1755227_+\|transposase	DDE transposase	NA	NA	NA	NA
WP_080775320.1\|1755500_1755686_+	hypothetical protein	A0A1P8CWQ3	Bacillus_phage	2.3e-17	67.2
WP_035180873.1\|1756105_1756897_-	ATPase AAA	NA	NA	NA	NA
WP_042512385.1\|1756900_1758283_-\|transposase	transposase	NA	NA	NA	NA
WP_080588397.1\|1758428_1758815_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_029143135.1\|1760822_1762514_+	hypothetical protein	K4I1H4	Acidithiobacillus_phage	5.3e-28	30.2
WP_035180810.1\|1762526_1763726_+	hypothetical protein	NA	NA	NA	NA
WP_035180812.1\|1764106_1764352_+	hypothetical protein	NA	NA	NA	NA
WP_050996513.1\|1766303_1766750_-	ATP-binding protein	NA	NA	NA	NA
WP_029143146.1\|1766891_1768577_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_042512522.1\|1771469_1772867_+\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_5

1814734 : 1823051

Synechococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_029142042.1\|1814734_1815328_-	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	3.2e-28	39.8
WP_029142043.1\|1815320_1816367_-	phosphoribosylformylglycinamidine cyclo-ligase	A0A0E3F760	Synechococcus_phage	1.3e-61	44.9
WP_013860598.1\|1816386_1817811_-	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	1.3e-48	33.9
WP_013860599.1\|1817795_1820045_-	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	5.0e-167	44.1
WP_017552973.1\|1820028_1820712_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_017552972.1\|1820708_1820963_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA
WP_029142044.1\|1820955_1821666_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	M4R1E8	Synechococcus_phage	1.4e-46	43.2
WP_017552970.1\|1821755_1823051_-	adenylosuccinate lyase	A0A1B3B081	Gordonia_phage	6.5e-18	32.8

DBSCAN-SWA_6

1852290 : 1904412

Bacillus_virus(25.0%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_080775322.1\|1852290_1853706_-\|transposase	ISLre2 family transposase	NA	NA	NA	NA
WP_052472242.1\|1853815_1854940_+\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	1.9e-82	44.1
WP_029142958.1\|1854975_1855209_-	hypothetical protein	NA	NA	NA	NA
WP_050996555.1\|1855639_1856026_-	hypothetical protein	NA	NA	NA	NA
WP_029142960.1\|1856302_1857538_+\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	6.4e-132	58.6
WP_080588435.1\|1858003_1858711_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	3.8e-20	26.4
WP_029142962.1\|1858703_1859069_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_014096860.1\|1859305_1859866_-	PadR family transcriptional regulator	NA	NA	NA	NA
WP_017550974.1\|1859979_1860483_+	phenolic acid decarboxylase	NA	NA	NA	NA
WP_029142963.1\|1860654_1861296_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_029142964.1\|1861443_1861881_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA
WP_029142965.1\|1862050_1862200_+	YydF family exported signaling peptide	NA	NA	NA	NA
WP_029142966.1\|1863125_1864109_+	YydG family peptide radical SAM peptide maturase	NA	NA	NA	NA
WP_035181029.1\|1864089_1864848_+	hypothetical protein	NA	NA	NA	NA
WP_029142978.1\|1864966_1865596_+	peptide ABC transporter ATP-binding protein	NA	NA	NA	NA
WP_029142979.1\|1865617_1866340_+	peptide ABC transporter permease	NA	NA	NA	NA
WP_029142980.1\|1866505_1866700_+	hypothetical protein	NA	NA	NA	NA
WP_029142983.1\|1868450_1869149_-	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA
WP_080588434.1\|1869679_1869835_-	hypothetical protein	NA	NA	NA	NA
WP_029142985.1\|1870256_1871720_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA
WP_026684643.1\|1871885_1872509_+	LysE family L-lysine exporter	NA	NA	NA	NA
WP_035181027.1\|1873233_1873452_-	hypothetical protein	NA	NA	NA	NA
WP_042512433.1\|1873458_1873677_-	hypothetical protein	NA	NA	NA	NA
WP_014096853.1\|1873683_1874628_-	hypothetical protein	NA	NA	NA	NA
WP_029142869.1\|1874655_1874940_-	hypothetical protein	NA	NA	NA	NA
WP_014096852.1\|1874998_1875223_-	membrane protein	NA	NA	NA	NA
WP_029142868.1\|1875236_1876298_-	YeeE/YedE family protein	NA	NA	NA	NA
WP_013860636.1\|1877858_1878758_-	NAD(P)-dependent oxidoreductase	A0A2N9QUX2	Trichoplusia_ni_ascovirus	9.6e-53	43.2
WP_013860637.1\|1878987_1879203_+	DNA-binding protein	NA	NA	NA	NA
WP_013860638.1\|1879268_1879460_-	hypothetical protein	NA	NA	NA	NA
WP_014096845.1\|1879593_1880601_-	ABC transporter	NA	NA	NA	NA
WP_029142867.1\|1880616_1881378_-	ABC transporter ATP-binding protein	A0A2K9L3Z8	Tupanvirus	2.9e-10	27.8
WP_050996552.1\|1881383_1882499_-	iron ABC transporter permease	NA	NA	NA	NA
WP_013860643.1\|1884355_1884916_+	hypothetical protein	NA	NA	NA	NA
WP_013860644.1\|1884945_1885125_+	hypothetical protein	NA	NA	NA	NA
WP_042512413.1\|1886513_1887809_-\|transposase	DDE transposase	NA	NA	NA	NA
WP_017550689.1\|1888107_1888767_-	MFS transporter	NA	NA	NA	NA
WP_029142769.1\|1889254_1889494_+	transcriptional regulator	NA	NA	NA	NA
WP_014096839.1\|1889477_1889681_+	hypothetical protein	NA	NA	NA	NA
WP_029142767.1\|1889710_1889908_+	DUF4177 domain-containing protein	NA	NA	NA	NA
WP_029142766.1\|1890031_1891585_-	glutamine-hydrolyzing GMP synthase	A0A1V0SH76	Hokovirus	3.5e-18	28.6
WP_013860651.1\|1891605_1891860_-	hypothetical protein	NA	NA	NA	NA
WP_013860652.1\|1891856_1892687_-	ammonia-dependent NAD(+) synthetase	G3MA24	Bacillus_virus	2.6e-76	55.7
WP_029142765.1\|1892757_1894224_-	nicotinate phosphoribosyltransferase	G3MA18	Bacillus_virus	3.3e-119	48.1
WP_019720788.1\|1894252_1894807_-	cysteine hydrolase	G3MA16	Bacillus_virus	7.3e-35	42.5
WP_029142764.1\|1894902_1895967_-	dipeptide epimerase	NA	NA	NA	NA
WP_029142763.1\|1896178_1897852_+	membrane protein	NA	NA	NA	NA
WP_013860656.1\|1897882_1898887_+	glycosyltransferase	A0A2H5BFL1	Salmonella_phage	3.5e-51	38.1
WP_013860657.1\|1898918_1899308_+	GtrA family protein	NA	NA	NA	NA
WP_029142762.1\|1899705_1901331_-	chaperonin GroEL	A0A219YK78	uncultured_virus	4.8e-159	59.5
WP_017552449.1\|1901384_1901669_-	co-chaperone GroES	A0A221S3C8	uncultured_virus	1.3e-19	52.7
WP_029142761.1\|1902051_1902780_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_014097075.1\|1903116_1904412_+\|transposase	DDE transposase	NA	NA	NA	NA

DBSCAN-SWA_7

1931156 : 1989196

Enterococcus_phage(11.11%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_029142791.1\|1931156_1931756_+\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA
WP_042512435.1\|1931877_1932996_-\|transposase	transposase	A0A288TXV8	Enterococcus_phage	1.8e-77	47.2
WP_035180610.1\|1933007_1933406_-\|transposase	IS200/IS605 family transposase	A0A286QN76	Streptococcus_phage	2.5e-53	72.7
WP_029142426.1\|1933708_1935136_-	ATP-dependent helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	1.1e-61	37.6
WP_029142425.1\|1935789_1936410_+	amino acid transporter	NA	NA	NA	NA
WP_029142424.1\|1936775_1937459_+	beta-phosphoglucomutase	A0A1D8KNV9	Synechococcus_phage	7.9e-07	24.1
WP_029142423.1\|1937465_1938422_+	LacI family transcriptional regulator	NA	NA	NA	NA
WP_029142422.1\|1938582_1940274_+	alpha-glucosidase	NA	NA	NA	NA
WP_029142421.1\|1940293_1942099_+	alpha-glycosidase	NA	NA	NA	NA
WP_029142420.1\|1942303_1943575_+	sugar ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_019720990.1\|1943662_1944970_+	sugar ABC transporter permease	NA	NA	NA	NA
WP_019720991.1\|1944971_1945823_+	sugar ABC transporter permease	NA	NA	NA	NA
WP_019720992.1\|1945919_1946762_+	DUF1189 domain-containing protein	NA	NA	NA	NA
WP_029142419.1\|1946791_1949074_+	maltose phosphorylase	NA	NA	NA	NA
WP_013860699.1\|1949070_1950738_+	alpha-glucosidase	NA	NA	NA	NA
WP_019720995.1\|1950821_1952198_-	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase	NA	NA	NA	NA
WP_019720996.1\|1952257_1953325_-	D-alanine--D-alanine ligase	NA	NA	NA	NA
WP_035180605.1\|1953566_1953764_-	hypothetical protein	NA	NA	NA	NA
WP_042512332.1\|1954022_1955432_-\|transposase	ISLre2 family transposase	NA	NA	NA	NA
WP_029142418.1\|1956621_1957935_+	HlyC/CorC family transporter	NA	NA	NA	NA
WP_029142417.1\|1958095_1958524_+	MerR family transcriptional regulator	NA	NA	NA	NA
WP_013860705.1\|1958606_1959989_+	HlyC/CorC family transporter	NA	NA	NA	NA
WP_013858128.1\|1960659_1961970_+\|transposase	DDE transposase family protein	NA	NA	NA	NA
WP_029142408.1\|1962298_1963897_+	hypothetical protein	NA	NA	NA	NA
WP_029142409.1\|1963880_1966682_+	ATP-dependent helicase	E7DNC5	Pneumococcus_phage	1.3e-31	25.4
WP_013860709.1\|1966771_1967206_+	hypothetical protein	NA	NA	NA	NA
WP_013860710.1\|1967229_1967652_-	hypothetical protein	NA	NA	NA	NA
WP_013860711.1\|1968001_1968361_+	single-stranded DNA-binding protein	A0A290GHL8	Caldibacillus_phage	3.7e-32	54.4
WP_019721004.1\|1968718_1969144_-	3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ	NA	NA	NA	NA
WP_029142410.1\|1969274_1970105_-	flagellar hook-basal body protein	NA	NA	NA	NA
WP_029142411.1\|1970132_1970921_-	flagellar hook-basal body protein	NA	NA	NA	NA
WP_019721007.1\|1970959_1971961_-	rod shape-determining protein	NA	NA	NA	NA
WP_019721008.1\|1972133_1972313_-	hypothetical protein	NA	NA	NA	NA
WP_017553086.1\|1972354_1972621_-	sporulation transcriptional regulator SpoIIID	M9Q261	Clostridium_phage	7.6e-14	48.0
WP_013860719.1\|1972944_1973715_-	M23 family peptidase	NA	NA	NA	NA
WP_019721009.1\|1973796_1974807_-	stage II sporulation protein D	Q2XU88	Pseudomonas_phage	1.7e-45	40.4
WP_019721010.1\|1975176_1976490_-	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA
WP_019721011.1\|1976522_1977263_-	hypothetical protein	NA	NA	NA	NA
WP_029142412.1\|1977495_1977732_-	DUF1146 domain-containing protein	NA	NA	NA	NA
WP_029142413.1\|1977863_1978274_-	F0F1 ATP synthase subunit epsilon	NA	NA	NA	NA
WP_029142414.1\|1978296_1979718_-	F0F1 ATP synthase subunit beta	NA	NA	NA	NA
WP_029142415.1\|1979793_1980651_-	F0F1 ATP synthase subunit gamma	NA	NA	NA	NA
WP_013860727.1\|1980794_1982309_-	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA
WP_017553094.1\|1982332_1982869_-	F0F1 ATP synthase subunit delta	NA	NA	NA	NA
WP_017553095.1\|1982865_1983387_-	ATP synthase F0 subunit B	NA	NA	NA	NA
WP_026104500.1\|1983571_1983784_-	F0F1 ATP synthase subunit C	NA	NA	NA	NA
WP_014096761.1\|1983849_1984566_-	F0F1 ATP synthase subunit A	NA	NA	NA	NA
WP_017553097.1\|1984582_1984957_-	ATP synthase subunit I	NA	NA	NA	NA
WP_013860732.1\|1985460_1986090_-	uracil phosphoribosyltransferase	NA	NA	NA	NA
WP_029142416.1\|1986334_1987579_-	serine hydroxymethyltransferase	A0A240F3L3	Aeromonas_phage	1.3e-103	53.5
WP_014097075.1\|1987900_1989196_-\|transposase	DDE transposase	NA	NA	NA	NA

DBSCAN-SWA_8

2014921 : 2078297

Indivirus(14.29%)

tRNA,coat,transposase,holin,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_042512427.1\|2014921_2016385_+\|transposase	transposase	NA	NA	NA	NA
WP_029143138.1\|2016743_2017889_-	hypothetical protein	NA	NA	NA	NA
WP_029143139.1\|2017901_2018741_-	hypothetical protein	NA	NA	NA	NA
WP_029143063.1\|2020208_2020877_-	ABC transporter ATP-binding protein	A0A1V0SE00	Indivirus	1.2e-07	23.8
WP_019721030.1\|2020869_2021274_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_017554527.1\|2021546_2023148_-	CTP synthase	A0A1J0FA14	Only_Syngen_Nebraska_virus	2.8e-151	51.6
WP_029143062.1\|2023377_2023953_-	DNA-directed RNA polymerase subunit delta	NA	NA	NA	NA
WP_017554529.1\|2024068_2024275_-	hypothetical protein	NA	NA	NA	NA
WP_029142439.1\|2024998_2025760_-	hypothetical protein	NA	NA	NA	NA
WP_029142438.1\|2025823_2026087_-	hypothetical protein	NA	NA	NA	NA
WP_019721034.1\|2026172_2026808_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_017550325.1\|2026827_2027970_-	acyl-CoA dehydrogenase	NA	NA	NA	NA
WP_029142437.1\|2028003_2029140_-	acyl-CoA dehydrogenase	NA	NA	NA	NA
WP_029142436.1\|2029181_2030360_-	acetyl-CoA acetyltransferase	NA	NA	NA	NA
WP_029713826.1\|2030796_2032941_-	hypothetical protein	NA	NA	NA	NA
WP_029142434.1\|2033151_2034351_+	cardiolipin synthase	NA	NA	NA	NA
WP_013860769.1\|2034692_2036363_-\|tRNA	arginine--tRNA ligase	NA	NA	NA	NA
WP_029142433.1\|2036371_2036800_-	DUF1934 domain-containing protein	NA	NA	NA	NA
WP_017552682.1\|2036955_2037828_-	agmatinase	NA	NA	NA	NA
WP_029713825.1\|2038008_2040060_+	penicillin-binding protein	NA	NA	NA	NA
WP_013860773.1\|2040166_2040679_-	hypothetical protein	NA	NA	NA	NA
WP_029142432.1\|2040709_2041372_-\|protease	site-2 protease family protein	NA	NA	NA	NA
WP_013860775.1\|2041518_2041704_+	4-oxalocrotonate tautomerase	NA	NA	NA	NA
WP_029142431.1\|2041718_2042237_-	hypothetical protein	NA	NA	NA	NA
WP_017552678.1\|2042254_2043571_-	HD domain-containing protein	E3T4P8	Cafeteria_roenbergensis_virus	2.3e-26	27.7
WP_017550339.1\|2044168_2044879_+	RsfA family transcriptional regulator	A0A1D6X8E5	Bacillus_phage	4.1e-06	50.0
WP_029142430.1\|2045324_2046158_-	lipoate--protein ligase family protein	NA	NA	NA	NA
WP_029142429.1\|2046189_2046369_-	hypothetical protein	NA	NA	NA	NA
WP_029142428.1\|2046752_2047724_-	phosphate acetyltransferase	NA	NA	NA	NA
WP_029142427.1\|2047894_2048650_+	heme-dependent peroxidase	NA	NA	NA	NA
WP_013860635.1\|2048785_2048926_-	ribbon-helix-helix protein, CopG family	NA	NA	NA	NA
WP_029143103.1\|2051840_2052290_+\|coat	spore coat protein GerQ	NA	NA	NA	NA
WP_029143102.1\|2052329_2052701_-	DUF423 domain-containing protein	NA	NA	NA	NA
WP_017550345.1\|2052864_2053110_-	hypothetical protein	NA	NA	NA	NA
WP_029143101.1\|2053453_2054140_-	uracil-DNA glycosylase	S4VZ65	Pandoravirus	7.6e-50	45.5
WP_013860790.1\|2054287_2054635_+	general stress protein	NA	NA	NA	NA
WP_029143100.1\|2054763_2055036_-	XRE family transcriptional regulator	NA	NA	NA	NA
WP_080775323.1\|2055415_2056828_-\|transposase	transposase	NA	NA	NA	NA
WP_042512438.1\|2056942_2058358_+\|transposase	ISLre2 family transposase	NA	NA	NA	NA
WP_029143115.1\|2059390_2060470_-	membrane protein	NA	NA	NA	NA
WP_029143114.1\|2060466_2061591_-	o-succinylbenzoate synthase	Q6A202	Oenococcus_phage	1.1e-08	19.9
WP_029143113.1\|2061593_2062406_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_034767321.1\|2062402_2063539_-	amidohydrolase	NA	NA	NA	NA
WP_029713854.1\|2063553_2064414_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
WP_017550998.1\|2064961_2065780_+	hydroxymethylpyrimidine/phosphomethylpyrimidine kinase	NA	NA	NA	NA
WP_017550997.1\|2065899_2066247_+	DUF1806 domain-containing protein	NA	NA	NA	NA
WP_019720390.1\|2066260_2066944_+	bacillithiol biosynthesis deacetylase BshB2	NA	NA	NA	NA
WP_029142597.1\|2067061_2067928_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
WP_017550995.1\|2067920_2070107_-	DNA helicase RecQ	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	6.3e-82	38.7
WP_029142598.1\|2070208_2071480_-	alkaline phosphatase	NA	NA	NA	NA
WP_019720393.1\|2071606_2072455_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
WP_029142599.1\|2072708_2073575_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_026104577.1\|2073908_2075177_-	two-component sensor histidine kinase	NA	NA	NA	NA
WP_029142600.1\|2075985_2076423_+	DUF2231 domain-containing protein	NA	NA	NA	NA
WP_026104576.1\|2076436_2076925_-\|tRNA	Cys-tRNA(Pro) deacylase	NA	NA	NA	NA
WP_029142601.1\|2077246_2077930_-	LrgB family protein	NA	NA	NA	NA
WP_029142602.1\|2077919_2078297_-\|holin	holin	NA	NA	NA	NA

DBSCAN-SWA_9

2085000 : 2161806

Planktothrix_phage(14.29%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_042512439.1\|2085000_2086464_-\|transposase	transposase	NA	NA	NA	NA
WP_029143098.1\|2088310_2088790_+	DUF4352 domain-containing protein	NA	NA	NA	NA
WP_029143097.1\|2088819_2089185_+	hypothetical protein	NA	NA	NA	NA
WP_029143096.1\|2089431_2089737_+	hypothetical protein	NA	NA	NA	NA
WP_029143095.1\|2090000_2090678_+	hypothetical protein	NA	NA	NA	NA
WP_029143094.1\|2091118_2091409_+	hypothetical protein	NA	NA	NA	NA
WP_035180618.1\|2091430_2091637_+	hypothetical protein	NA	NA	NA	NA
WP_080775324.1\|2091903_2092107_-	hypothetical protein	A0A0K2CZ57	Paenibacillus_phage	1.0e-10	58.3
WP_080588418.1\|2092305_2092833_-	histidine phosphatase family protein	NA	NA	NA	NA
WP_029142452.1\|2093829_2094276_-	threonine/serine exporter	NA	NA	NA	NA
WP_029142453.1\|2094334_2095084_-	threonine/serine exporter	NA	NA	NA	NA
WP_029142454.1\|2095217_2096291_-	branched-chain amino acid aminotransferase	NA	NA	NA	NA
WP_029142455.1\|2096599_2098402_-	carbon starvation protein A	NA	NA	NA	NA
WP_013860819.1\|2098855_2099698_-	metal ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_017552056.1\|2099757_2100420_-	ABC transporter permease	NA	NA	NA	NA
WP_019721649.1\|2100409_2101450_-	methionine ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.1e-34	39.4
WP_029142456.1\|2101712_2102492_-	ABC transporter ATP-binding protein	F2Y302	Organic_Lake_phycodnavirus	1.3e-10	24.9
WP_029142457.1\|2102554_2103127_-	hypothetical protein	NA	NA	NA	NA
WP_017553483.1\|2103138_2104317_-	hypothetical protein	A0A1B1P792	Bacillus_phage	1.2e-55	35.3
WP_017552051.1\|2104735_2106085_+	MATE family efflux transporter	NA	NA	NA	NA
WP_029142458.1\|2106093_2106318_+	hypothetical protein	NA	NA	NA	NA
WP_029142459.1\|2106292_2107087_+	glycosyltransferase family 8 protein	NA	NA	NA	NA
WP_026104792.1\|2107149_2108382_+	peptidase T	NA	NA	NA	NA
WP_029142460.1\|2108640_2108892_-	DUF4944 domain-containing protein	NA	NA	NA	NA
WP_029142461.1\|2109222_2110725_-	MFS transporter	NA	NA	NA	NA
WP_017553492.1\|2111574_2112855_+	uracil permease	Q9KX94	Enterobacteria_phage	1.0e-63	37.6
WP_029142462.1\|2113066_2114791_-	ubiquinone-dependent pyruvate dehydrogenase	G8DDL3	Micromonas_pusilla_virus	2.4e-36	23.2
WP_029142463.1\|2115363_2116587_-\|transposase	IS110 family transposase	M1NSC9	Streptococcus_phage	8.2e-79	46.2
WP_013860836.1\|2119323_2120403_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.7e-27	36.6
WP_013860837.1\|2120399_2121338_+	sugar ABC transporter permease	NA	NA	NA	NA
WP_013860838.1\|2121334_2122153_+	carbohydrate ABC transporter permease	NA	NA	NA	NA
WP_029143022.1\|2122416_2123760_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_029143021.1\|2123779_2124577_+	glycerophosphodiester phosphodiesterase	A0A292GJA3	Xanthomonas_phage	2.3e-05	43.9
WP_080775325.1\|2125220_2125646_+	hypothetical protein	NA	NA	NA	NA
WP_013860845.1\|2127663_2129409_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	6.2e-88	37.0
WP_014096662.1\|2129928_2130585_-	hypothetical protein	R4TNY5	Halovirus	1.3e-19	32.4
WP_014096661.1\|2130596_2131097_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	E7DN65	Pneumococcus_phage	6.3e-46	65.2
WP_029142945.1\|2133867_2135331_+	alpha-amylase	NA	NA	NA	NA
WP_029142947.1\|2136078_2136903_+	STAS domain-containing protein	NA	NA	NA	NA
WP_042512413.1\|2137234_2138530_+\|transposase	DDE transposase	NA	NA	NA	NA
WP_013860852.1\|2139241_2140441_+	saccharopine dehydrogenase	NA	NA	NA	NA
WP_029142986.1\|2140440_2141568_+	carboxynorspermidine decarboxylase	NA	NA	NA	NA
WP_019720099.1\|2141836_2142913_+	DUF1611 domain-containing protein	NA	NA	NA	NA
WP_029142987.1\|2142912_2144073_+	alanine racemase	NA	NA	NA	NA
WP_019720100.1\|2144109_2144952_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_029142988.1\|2144979_2145717_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.6e-32	36.5
WP_013860859.1\|2145709_2146399_-	amino acid ABC transporter permease	NA	NA	NA	NA
WP_029142989.1\|2146379_2146874_-	polar amino acid ABC transporter permease	NA	NA	NA	NA
WP_013858128.1\|2147227_2148538_+\|transposase	DDE transposase family protein	NA	NA	NA	NA
WP_029143133.1\|2150232_2150454_-	hypothetical protein	NA	NA	NA	NA
WP_029143132.1\|2150959_2152462_-	malate:quinone oxidoreductase	NA	NA	NA	NA
WP_029143173.1\|2153541_2154096_-	histidine phosphatase family protein	NA	NA	NA	NA
WP_080588407.1\|2154363_2155974_+\|transposase	transposase	NA	NA	NA	NA
WP_035180281.1\|2156399_2157152_-	ATP-binding protein	A0A2L1IVB6	Escherichia_phage	2.1e-37	41.4
WP_052472243.1\|2157148_2158645_-\|transposase	transposase	NA	NA	NA	NA
WP_080775326.1\|2160417_2161806_+\|transposase	ISLre2 family transposase	NA	NA	NA	NA

DBSCAN-SWA_10

2371063 : 2426687

Bacillus_phage(25.81%)

integrase,transposase,terminase,portal

attL 2372471:2372530|attR 2407278:2409086

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_052472244.1\|2371063_2372533_+\|transposase	transposase	NA	NA	NA	NA
2372471:2372530	attL	NA	NA	NA	NA
WP_035180300.1\|2372598_2373882_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_042512411.1\|2374286_2375012_+	ATP-binding protein	A0A059NT77	Lactococcus_phage	3.5e-37	40.3
WP_029713899.1\|2375602_2376046_+	hypothetical protein	NA	NA	NA	NA
WP_013858122.1\|2376462_2377203_-	polysaccharide deacetylase	NA	NA	NA	NA
WP_019722035.1\|2377341_2377569_+	hypothetical protein	NA	NA	NA	NA
WP_029142969.1\|2377900_2379292_+	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA
WP_013858125.1\|2379291_2380302_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA
WP_029142970.1\|2380544_2382293_+	thiol reductant ABC exporter subunit CydD	W8CYL7	Bacillus_phage	3.3e-25	26.3
WP_029142971.1\|2382267_2383992_+	thiol reductant ABC exporter subunit CydC	W8CYL7	Bacillus_phage	2.8e-24	25.9
WP_029142972.1\|2384065_2384275_+	hypothetical protein	NA	NA	NA	NA
WP_029142701.1\|2390824_2392051_-\|integrase	site-specific integrase	S5MNZ2	Brevibacillus_phage	1.0e-92	47.6
WP_029142702.1\|2392155_2393361_-	hypothetical protein	A0A1P8CWK6	Bacillus_phage	1.7e-65	72.1
WP_052472245.1\|2393406_2394342_-	outer membrane protein assembly factor BamE	NA	NA	NA	NA
WP_029142704.1\|2394379_2395006_-	ImmA/IrrE family metallo-endopeptidase	A0A1L2JY13	Aeribacillus_phage	5.7e-20	34.7
WP_029142705.1\|2395029_2395434_-	XRE family transcriptional regulator	A8ATX5	Listeria_phage	9.4e-08	46.8
WP_029142706.1\|2395598_2395841_+	XRE family transcriptional regulator	A8ATX6	Listeria_phage	2.1e-15	54.2
WP_029142707.1\|2395841_2396633_+	hypothetical protein	A8ATY0	Listeria_phage	4.8e-56	45.0
WP_035176495.1\|2396634_2396820_+	DNA-binding protein	U5P0W4	Brevibacillus_phage	1.0e-09	61.8
WP_029142708.1\|2396880_2397399_+	hypothetical protein	A0A290FZK9	Caldibacillus_phage	3.7e-25	40.5
WP_029142709.1\|2397398_2397683_+	hypothetical protein	NA	NA	NA	NA
WP_029142711.1\|2398305_2398545_+	hypothetical protein	NA	NA	NA	NA
WP_029142712.1\|2398549_2398750_+	hypothetical protein	A0A290GDU5	Caldibacillus_phage	8.8e-07	40.0
WP_035176503.1\|2398852_2399794_+	hypothetical protein	A8ATY5	Listeria_phage	1.3e-108	63.0
WP_029142714.1\|2399793_2400702_+	hypothetical protein	A8ATY6	Listeria_phage	1.8e-94	70.0
WP_029142715.1\|2400758_2401574_+	hypothetical protein	A0A1C8E9B4	Bacillus_phage	7.2e-23	58.2
WP_035176497.1\|2401497_2402364_+	DNA replication protein	S6B1M2	Thermus_phage	1.2e-113	70.8
WP_029142717.1\|2402363_2402543_+	hypothetical protein	NA	NA	NA	NA
WP_029142718.1\|2402704_2402902_+	hypothetical protein	NA	NA	NA	NA
WP_029142719.1\|2402898_2403531_+	hypothetical protein	A0A290GJJ6	Caldibacillus_phage	3.7e-43	46.3
WP_029142720.1\|2403540_2404002_+	DUF1064 domain-containing protein	A0A2P1JTY5	Anoxybacillus_phage	1.9e-57	79.3
WP_029142721.1\|2404447_2405155_+	hypothetical protein	H7BVT3	unidentified_phage	1.2e-18	40.5
WP_029713870.1\|2405233_2405428_+	DUF3954 domain-containing protein	NA	NA	NA	NA
WP_029142722.1\|2406121_2406592_+	hypothetical protein	NA	NA	NA	NA
WP_029142723.1\|2406599_2407340_+	hypothetical protein	NA	NA	NA	NA
WP_035180300.1\|2407405_2408689_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_029142864.1\|2409095_2410052_+	hypothetical protein	A0A0N7CDP5	Skermania_phage	3.2e-22	32.1
2407278:2409086	attR	NA	NA	NA	NA
WP_029142863.1\|2410048_2410732_+	hypothetical protein	NA	NA	NA	NA
WP_029142862.1\|2410724_2411441_+	CRISPR system precrRNA processing endoribonuclease RAMP protein Cas6	NA	NA	NA	NA
WP_080588417.1\|2411259_2412159_+	hypothetical protein	NA	NA	NA	NA
WP_029142860.1\|2413691_2413880_+	hypothetical protein	NA	NA	NA	NA
WP_029142859.1\|2413876_2414320_+	hypothetical protein	A0A290FZR5	Caldibacillus_phage	6.0e-24	45.2
WP_029142858.1\|2414582_2414786_+	hypothetical protein	NA	NA	NA	NA
WP_029142857.1\|2414859_2415627_+	hypothetical protein	A0A2P1JTW4	Anoxybacillus_phage	2.7e-64	59.6
WP_029142856.1\|2415595_2416888_+\|terminase	PBSX family phage terminase large subunit	A0A1B1P869	Bacillus_phage	1.7e-196	76.4
WP_029142855.1\|2416900_2418424_+\|portal	portal protein	A0A1B1P863	Bacillus_phage	1.5e-135	53.5
WP_029142854.1\|2418430_2419540_+	hypothetical protein	B5LPR2	Bacillus_virus	5.7e-87	43.9
WP_029713880.1\|2419922_2420618_+	hypothetical protein	M9Q248	Clostridium_phage	2.0e-05	34.8
WP_029142852.1\|2420630_2421560_+	hypothetical protein	A0A1B1P885	Bacillus_phage	1.9e-104	62.3
WP_029142851.1\|2421593_2421830_+	hypothetical protein	B5LPR5	Bacillus_virus	7.4e-13	46.8
WP_029142850.1\|2421832_2422216_+	hypothetical protein	NA	NA	NA	NA
WP_035176647.1\|2422282_2422633_+	hypothetical protein	NA	NA	NA	NA
WP_029142848.1\|2422637_2422991_+	hypothetical protein	A0A1B1P872	Bacillus_phage	2.9e-29	53.1
WP_080588431.1\|2422911_2423397_+	hypothetical protein	NA	NA	NA	NA
WP_050996532.1\|2423402_2423606_+	hypothetical protein	O03972	Lactobacillus_phage	1.2e-16	67.2
WP_029142824.1\|2425637_2426063_+	hypothetical protein	NA	NA	NA	NA
WP_029142825.1\|2426069_2426687_+	hypothetical protein	O03936	Lactobacillus_phage	4.6e-30	40.4

DBSCAN-SWA_11

2430720 : 2530851

Listeria_phage(19.15%)

integrase,portal,transposase,holin,protease,terminase

attL 2439076:2439135|attR 2528045:2529811

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_029142827.1\|2430720_2432406_+	hypothetical protein	A0A059T682	Listeria_phage	4.1e-89	35.2
WP_029142828.1\|2432514_2433033_+	hypothetical protein	A0A1W6JHR5	Lactococcus_phage	4.1e-32	44.6
WP_029142829.1\|2433086_2435408_+	hypothetical protein	A0A059T7Y6	Listeria_phage	9.6e-129	35.1
WP_029142830.1\|2435404_2438461_+	hypothetical protein	D7RWK2	Brochothrix_phage	1.9e-12	53.3
WP_029142831.1\|2438478_2438916_+	DUF1617 domain-containing protein	A0A1I9KKA6	Lactobacillus_phage	8.6e-07	29.4
WP_029142832.1\|2438915_2439107_+	hypothetical protein	NA	NA	NA	NA
2439076:2439135	attL	NA	NA	NA	NA
WP_014097075.1\|2439307_2440603_+\|transposase	DDE transposase	NA	NA	NA	NA
WP_042512445.1\|2440995_2441313_+	hypothetical protein	NA	NA	NA	NA
WP_029143147.1\|2441326_2441566_+\|holin	phage holin	A0A2H4J231	uncultured_Caudovirales_phage	8.5e-25	74.0
WP_051130900.1\|2441615_2442575_+	hypothetical protein	A0A172JIA8	Bacillus_phage	1.3e-108	57.7
WP_013858128.1\|2442833_2444144_+\|transposase	DDE transposase family protein	NA	NA	NA	NA
WP_042512446.1\|2444568_2444961_-	ribbon-helix-helix protein, CopG family	NA	NA	NA	NA
WP_029143088.1\|2445157_2445667_-	hypothetical protein	NA	NA	NA	NA
WP_029143087.1\|2445686_2446058_-	hypothetical protein	NA	NA	NA	NA
WP_029143086.1\|2446353_2446575_-	DUF3006 domain-containing protein	NA	NA	NA	NA
WP_029143085.1\|2446580_2447717_-	MBL fold metallo-hydrolase	Q0H255	Geobacillus_phage	1.2e-97	68.7
WP_029142701.1\|2448132_2449359_-\|integrase	site-specific integrase	S5MNZ2	Brevibacillus_phage	1.0e-92	47.6
WP_029142702.1\|2449463_2450669_-	hypothetical protein	A0A1P8CWK6	Bacillus_phage	1.7e-65	72.1
WP_052472245.1\|2450714_2451650_-	outer membrane protein assembly factor BamE	NA	NA	NA	NA
WP_029142704.1\|2451687_2452314_-	ImmA/IrrE family metallo-endopeptidase	A0A1L2JY13	Aeribacillus_phage	5.7e-20	34.7
WP_029142705.1\|2452337_2452742_-	XRE family transcriptional regulator	A8ATX5	Listeria_phage	9.4e-08	46.8
WP_029142706.1\|2452906_2453149_+	XRE family transcriptional regulator	A8ATX6	Listeria_phage	2.1e-15	54.2
WP_029142707.1\|2453149_2453941_+	hypothetical protein	A8ATY0	Listeria_phage	4.8e-56	45.0
WP_035176495.1\|2453942_2454128_+	DNA-binding protein	U5P0W4	Brevibacillus_phage	1.0e-09	61.8
WP_029142708.1\|2454188_2454707_+	hypothetical protein	A0A290FZK9	Caldibacillus_phage	3.7e-25	40.5
WP_029142709.1\|2454706_2454991_+	hypothetical protein	NA	NA	NA	NA
WP_029142711.1\|2455613_2455853_+	hypothetical protein	NA	NA	NA	NA
WP_029142712.1\|2455857_2456058_+	hypothetical protein	A0A290GDU5	Caldibacillus_phage	8.8e-07	40.0
WP_035176503.1\|2456160_2457102_+	hypothetical protein	A8ATY5	Listeria_phage	1.3e-108	63.0
WP_029142714.1\|2457101_2458010_+	hypothetical protein	A8ATY6	Listeria_phage	1.8e-94	70.0
WP_029142715.1\|2458066_2458882_+	hypothetical protein	A0A1C8E9B4	Bacillus_phage	7.2e-23	58.2
WP_035176497.1\|2458805_2459672_+	DNA replication protein	S6B1M2	Thermus_phage	1.2e-113	70.8
WP_029142717.1\|2459671_2459851_+	hypothetical protein	NA	NA	NA	NA
WP_029142718.1\|2460012_2460210_+	hypothetical protein	NA	NA	NA	NA
WP_029142719.1\|2460206_2460839_+	hypothetical protein	A0A290GJJ6	Caldibacillus_phage	3.7e-43	46.3
WP_029142720.1\|2460848_2461310_+	DUF1064 domain-containing protein	A0A2P1JTY5	Anoxybacillus_phage	1.9e-57	79.3
WP_029142721.1\|2461755_2462463_+	hypothetical protein	H7BVT3	unidentified_phage	1.2e-18	40.5
WP_029713870.1\|2462541_2462736_+	DUF3954 domain-containing protein	NA	NA	NA	NA
WP_029142722.1\|2463429_2463900_+	hypothetical protein	NA	NA	NA	NA
WP_029142723.1\|2463907_2464648_+	hypothetical protein	NA	NA	NA	NA
WP_042512447.1\|2466927_2467245_+	hypothetical protein	NA	NA	NA	NA
WP_042512448.1\|2467361_2467616_+	hypothetical protein	NA	NA	NA	NA
WP_042512449.1\|2467630_2468047_+	hypothetical protein	NA	NA	NA	NA
WP_029142862.1\|2468039_2468756_+	CRISPR system precrRNA processing endoribonuclease RAMP protein Cas6	NA	NA	NA	NA
WP_080588417.1\|2468574_2469474_+	hypothetical protein	NA	NA	NA	NA
WP_029142860.1\|2471007_2471196_+	hypothetical protein	NA	NA	NA	NA
WP_029142859.1\|2471192_2471636_+	hypothetical protein	A0A290FZR5	Caldibacillus_phage	6.0e-24	45.2
WP_029142858.1\|2471898_2472102_+	hypothetical protein	NA	NA	NA	NA
WP_029142857.1\|2472175_2472943_+	hypothetical protein	A0A2P1JTW4	Anoxybacillus_phage	2.7e-64	59.6
WP_029142856.1\|2472911_2474204_+\|terminase	PBSX family phage terminase large subunit	A0A1B1P869	Bacillus_phage	1.7e-196	76.4
WP_029142855.1\|2474216_2475740_+\|portal	portal protein	A0A1B1P863	Bacillus_phage	1.5e-135	53.5
WP_029142854.1\|2475746_2476856_+	hypothetical protein	B5LPR2	Bacillus_virus	5.7e-87	43.9
WP_029713880.1\|2477238_2477934_+	hypothetical protein	M9Q248	Clostridium_phage	2.0e-05	34.8
WP_029142852.1\|2477946_2478876_+	hypothetical protein	A0A1B1P885	Bacillus_phage	1.9e-104	62.3
WP_029142851.1\|2478909_2479146_+	hypothetical protein	B5LPR5	Bacillus_virus	7.4e-13	46.8
WP_029142850.1\|2479148_2479532_+	hypothetical protein	NA	NA	NA	NA
WP_035176647.1\|2479598_2479949_+	hypothetical protein	NA	NA	NA	NA
WP_029142848.1\|2479953_2480307_+	hypothetical protein	A0A1B1P872	Bacillus_phage	2.9e-29	53.1
WP_080588431.1\|2480227_2480713_+	hypothetical protein	NA	NA	NA	NA
WP_050996532.1\|2480718_2480922_+	hypothetical protein	O03972	Lactobacillus_phage	1.2e-16	67.2
WP_013858128.1\|2481108_2482419_-\|transposase	DDE transposase family protein	NA	NA	NA	NA
WP_029142824.1\|2482956_2483382_+	hypothetical protein	NA	NA	NA	NA
WP_029142825.1\|2483388_2484006_+	hypothetical protein	O03936	Lactobacillus_phage	4.6e-30	40.4
WP_029142826.1\|2484002_2488043_+	hypothetical protein	Q94MA1	Lactococcus_phage	6.2e-67	47.2
WP_029142827.1\|2488039_2489725_+	hypothetical protein	A0A059T682	Listeria_phage	4.1e-89	35.2
WP_029142828.1\|2489833_2490352_+	hypothetical protein	A0A1W6JHR5	Lactococcus_phage	4.1e-32	44.6
WP_029142829.1\|2490405_2492727_+	hypothetical protein	A0A059T7Y6	Listeria_phage	9.6e-129	35.1
WP_029142830.1\|2492723_2495780_+	hypothetical protein	D7RWK2	Brochothrix_phage	1.9e-12	53.3
WP_029142831.1\|2495797_2496235_+	DUF1617 domain-containing protein	A0A1I9KKA6	Lactobacillus_phage	8.6e-07	29.4
WP_029142832.1\|2496234_2496426_+	hypothetical protein	NA	NA	NA	NA
WP_014097075.1\|2496626_2497922_+\|transposase	DDE transposase	NA	NA	NA	NA
WP_042512445.1\|2498314_2498632_+	hypothetical protein	NA	NA	NA	NA
WP_029143147.1\|2498645_2498885_+\|holin	phage holin	A0A2H4J231	uncultured_Caudovirales_phage	8.5e-25	74.0
WP_051130900.1\|2498934_2499894_+	hypothetical protein	A0A172JIA8	Bacillus_phage	1.3e-108	57.7
WP_042512446.1\|2501886_2502279_-	ribbon-helix-helix protein, CopG family	NA	NA	NA	NA
WP_029143088.1\|2502475_2502985_-	hypothetical protein	NA	NA	NA	NA
WP_029143087.1\|2503004_2503376_-	hypothetical protein	NA	NA	NA	NA
WP_029143086.1\|2503671_2503893_-	DUF3006 domain-containing protein	NA	NA	NA	NA
WP_029143085.1\|2503898_2505035_-	MBL fold metallo-hydrolase	Q0H255	Geobacillus_phage	1.2e-97	68.7
WP_013858129.1\|2505623_2506523_+	arginase	A0A1V0SJM8	Klosneuvirus	7.7e-26	34.1
WP_013858130.1\|2506630_2506804_-	aspartyl-phosphate phosphatase Spo0E family protein	NA	NA	NA	NA
WP_080775328.1\|2507382_2508798_-\|transposase	ISLre2 family transposase	NA	NA	NA	NA
WP_080651048.1\|2508844_2509372_+	RNA polymerase sigma factor SigW	NA	NA	NA	NA
WP_029143171.1\|2509384_2509999_+	anti-sigma W factor	NA	NA	NA	NA
WP_042512413.1\|2511735_2513031_+\|transposase	DDE transposase	NA	NA	NA	NA
WP_017553452.1\|2513365_2514193_+	TIGR00159 family protein	NA	NA	NA	NA
WP_029143099.1\|2514185_2515436_+	hypothetical protein	NA	NA	NA	NA
WP_013858135.1\|2515472_2516825_+	phosphoglucosamine mutase	NA	NA	NA	NA
WP_080775309.1\|2517009_2518425_+\|transposase	ISLre2 family transposase	NA	NA	NA	NA
WP_017553454.1\|2519084_2520887_+	glutamine--fructose-6-phosphate transaminase (isomerizing)	Q84421	Paramecium_bursaria_Chlorella_virus	8.0e-107	39.4
WP_080588402.1\|2521966_2522305_+	ArsR family transcriptional regulator	NA	NA	NA	NA
WP_013858149.1\|2522479_2522779_+	DUF3219 domain-containing protein	NA	NA	NA	NA
WP_029143034.1\|2522775_2523771_+	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA
WP_014097075.1\|2526576_2527872_-\|transposase	DDE transposase	NA	NA	NA	NA
WP_029143141.1\|2528348_2529560_-	MFS transporter	NA	NA	NA	NA
WP_029143140.1\|2529652_2530102_-	glycine-rich domain-containing protein-like	A0A2I2L429	Orpheovirus	3.1e-07	32.7
2528045:2529811	attR	NA	NA	NA	NA
WP_073193837.1\|2530458_2530851_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA

DBSCAN-SWA_12

2582670 : 2636517

Bacillus_phage(20.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_029142579.1\|2582670_2583975_+\|transposase	transposase	NA	NA	NA	NA
WP_042512451.1\|2586700_2586916_+	hypothetical protein	NA	NA	NA	NA
WP_035180873.1\|2587160_2587952_-	ATPase AAA	NA	NA	NA	NA
WP_080775331.1\|2589482_2589911_-	hypothetical protein	NA	NA	NA	NA
WP_014096362.1\|2594342_2594891_-	hypothetical protein	NA	NA	NA	NA
WP_029143158.1\|2595066_2595651_+	TetR family transcriptional regulator	NA	NA	NA	NA
WP_014096360.1\|2596094_2597558_+\|transposase	transposase	NA	NA	NA	NA
WP_029142940.1\|2598367_2599786_+	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_014096357.1\|2599825_2600137_+	hypothetical protein	NA	NA	NA	NA
WP_029142939.1\|2600263_2600593_+	hypothetical protein	NA	NA	NA	NA
WP_029142938.1\|2600742_2602146_-	pectate lyase	D6R401	Bacillus_phage	9.6e-100	48.0
WP_029142937.1\|2602316_2602622_+	hypothetical protein	NA	NA	NA	NA
WP_014096354.1\|2603129_2603855_+	phosphoadenylyl-sulfate reductase	NA	NA	NA	NA
WP_013858202.1\|2603982_2604741_+	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA
WP_019720421.1\|2604747_2605488_+	sirohydrochlorin chelatase	NA	NA	NA	NA
WP_029142936.1\|2605468_2605834_+	hypothetical protein	NA	NA	NA	NA
WP_029142935.1\|2605803_2606430_+	siroheme synthase	NA	NA	NA	NA
WP_029142934.1\|2606568_2607099_+	YbaK/EbsC family protein	NA	NA	NA	NA
WP_017553199.1\|2607160_2607343_+	hypothetical protein	NA	NA	NA	NA
WP_029142933.1\|2607513_2608617_-	glycerol dehydrogenase	NA	NA	NA	NA
WP_035181142.1\|2608661_2608922_-	hypothetical protein	NA	NA	NA	NA
WP_041819492.1\|2608946_2609210_-	hypothetical protein	NA	NA	NA	NA
WP_029143124.1\|2609615_2611208_+	AMP-dependent synthetase	A0A2H4PQM9	Staphylococcus_phage	1.9e-43	27.0
WP_073193854.1\|2611672_2612047_+\|transposase	transposase	Q332B3	Clostridium_botulinum_C_phage	3.6e-38	60.3
WP_013858209.1\|2612374_2612599_-	hypothetical protein	NA	NA	NA	NA
WP_029142800.1\|2612725_2613655_-	EamA family transporter	NA	NA	NA	NA
WP_019720416.1\|2613877_2614771_+	NERD nuclease	NA	NA	NA	NA
WP_029142801.1\|2614857_2615346_+	hypothetical protein	NA	NA	NA	NA
WP_029142802.1\|2615337_2616279_-	cation transporter	NA	NA	NA	NA
WP_029142803.1\|2616574_2618410_-	glutamine--fructose-6-phosphate transaminase (isomerizing)	Q84421	Paramecium_bursaria_Chlorella_virus	2.5e-103	37.6
WP_035176624.1\|2618470_2618653_+	hypothetical protein	NA	NA	NA	NA
WP_029142804.1\|2618881_2620399_-	glycosyl transferase	NA	NA	NA	NA
WP_029142805.1\|2621028_2621970_+	mevalonate kinase	NA	NA	NA	NA
WP_029142806.1\|2622120_2622324_-	hypothetical protein	NA	NA	NA	NA
WP_013858215.1\|2622370_2623351_+	diphosphomevalonate decarboxylase	NA	NA	NA	NA
WP_029142807.1\|2623496_2623694_+	hypothetical protein	NA	NA	NA	NA
WP_029142808.1\|2623709_2624810_+	phosphomevalonate kinase	NA	NA	NA	NA
WP_029142809.1\|2624960_2625605_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_042512453.1\|2625717_2625912_-	hypothetical protein	NA	NA	NA	NA
WP_029142810.1\|2626147_2626327_+	hypothetical protein	NA	NA	NA	NA
WP_013860635.1\|2626386_2626527_-	ribbon-helix-helix protein, CopG family	NA	NA	NA	NA
WP_042512454.1\|2626614_2627733_+\|transposase	transposase	A0A288TXV8	Enterococcus_phage	2.4e-77	47.2
WP_029143130.1\|2628077_2629247_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
WP_029143131.1\|2629364_2630012_+	alkylhydroperoxidase	NA	NA	NA	NA
WP_014097075.1\|2630469_2631765_+\|transposase	DDE transposase	NA	NA	NA	NA
WP_029143136.1\|2632082_2632352_+	ACT domain-containing protein	NA	NA	NA	NA
WP_013858225.1\|2632367_2633723_+	PFL family protein	NA	NA	NA	NA
WP_035180524.1\|2634441_2635035_+	hypothetical protein	NA	NA	NA	NA
WP_013858128.1\|2635206_2636517_+\|transposase	DDE transposase family protein	NA	NA	NA	NA

DBSCAN-SWA_13

2738870 : 2862433

Enterococcus_phage(15.38%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013858128.1\|2738870_2740181_+\|transposase	DDE transposase family protein	NA	NA	NA	NA
WP_052472247.1\|2745283_2748832_+	peptidase M30, hyicolysin	NA	NA	NA	NA
WP_013858322.1\|2749091_2749451_+	XRE family transcriptional regulator	NA	NA	NA	NA
WP_013858323.1\|2749443_2750202_+	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA
WP_029142898.1\|2750198_2750840_+	hypothetical protein	NA	NA	NA	NA
WP_029142897.1\|2752690_2754229_-	hypothetical protein	NA	NA	NA	NA
WP_029142896.1\|2754502_2755642_+	glutathione-dependent formaldehyde dehydrogenase	A0A0G2YAX3	Acanthamoeba_polyphaga_mimivirus	2.5e-13	30.5
WP_029142895.1\|2755863_2756484_+	FMN-dependent NADH-azoreductase	NA	NA	NA	NA
WP_029142894.1\|2757003_2757936_+	lysophospholipase	NA	NA	NA	NA
WP_042512457.1\|2758821_2761725_-	mannosyl-glycoprotein endo-beta-N-acetylglucosamidase	Q4ZC50	Staphylococcus_virus	7.0e-36	44.7
WP_029143108.1\|2762106_2762421_-	hypothetical protein	NA	NA	NA	NA
WP_017553307.1\|2763065_2763209_-	YjcZ family sporulation protein	NA	NA	NA	NA
WP_014096209.1\|2763363_2763621_-	hypothetical protein	NA	NA	NA	NA
WP_029143109.1\|2763817_2764600_-\|protease	Zn-dependent protease	NA	NA	NA	NA
WP_042512458.1\|2764972_2766091_+\|transposase	transposase	A0A288TXV8	Enterococcus_phage	1.8e-77	47.2
WP_073193877.1\|2767089_2769951_-	dextransucrase	NA	NA	NA	NA
WP_013858341.1\|2770667_2771510_+	toxin HipA	NA	NA	NA	NA
WP_013858342.1\|2771510_2772263_+	DNA-binding protein	NA	NA	NA	NA
WP_042512459.1\|2773062_2773311_+	hypothetical protein	NA	NA	NA	NA
WP_029142874.1\|2773274_2774258_-	2-nitropropane dioxygenase	NA	NA	NA	NA
WP_029142873.1\|2774260_2774617_-	cysteine methyltransferase	NA	NA	NA	NA
WP_017553300.1\|2774891_2775398_-	DUF1648 domain-containing protein	NA	NA	NA	NA
WP_029142872.1\|2775659_2776991_+	MBL fold metallo-hydrolase	Q0H255	Geobacillus_phage	4.6e-75	58.1
WP_017553298.1\|2777006_2777219_+	DUF3006 domain-containing protein	NA	NA	NA	NA
WP_029713884.1\|2777830_2779981_+	CRISPR-associated helicase/endonuclease Cas3	NA	NA	NA	NA
WP_042512332.1\|2780562_2781972_-\|transposase	ISLre2 family transposase	NA	NA	NA	NA
WP_029143128.1\|2782471_2784148_+	type I-C CRISPR-associated protein Cas8c/Csd1	NA	NA	NA	NA
WP_042512460.1\|2784151_2785075_+	type I-C CRISPR-associated protein Cas7/Csd2	NA	NA	NA	NA
WP_042512461.1\|2786708_2787065_+	hypothetical protein	NA	NA	NA	NA
WP_029143065.1\|2787825_2788032_-	hypothetical protein	NA	NA	NA	NA
WP_029143066.1\|2788028_2788547_-	hypothetical protein	L0L915	Bacillus_phage	1.2e-28	43.3
WP_029143067.1\|2789214_2790870_+	APC family permease	NA	NA	NA	NA
WP_042512462.1\|2791002_2793216_-	peptidase	NA	NA	NA	NA
WP_029143118.1\|2793693_2794662_+	LytR family transcriptional regulator	NA	NA	NA	NA
WP_029143117.1\|2794688_2794874_+	hypothetical protein	NA	NA	NA	NA
WP_013858355.1\|2795006_2795372_+	hypothetical protein	NA	NA	NA	NA
WP_029143116.1\|2795509_2796427_-	aldo/keto reductase	NA	NA	NA	NA
WP_042512562.1\|2796623_2797526_+\|transposase	transposase	NA	NA	NA	NA
WP_042512463.1\|2797522_2797759_+	hypothetical protein	NA	NA	NA	NA
WP_042512564.1\|2797805_2798240_-	CoA transferase	NA	NA	NA	NA
WP_029143143.1\|2798596_2799610_+	NADP-dependent oxidoreductase	NA	NA	NA	NA
WP_042512464.1\|2800229_2801345_+\|transposase	transposase	A0A288TXV8	Enterococcus_phage	3.0e-80	47.6
WP_035180300.1\|2801787_2803071_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_029143032.1\|2803477_2804677_+	MFS transporter	NA	NA	NA	NA
WP_017552572.1\|2804710_2804992_+	DNA-binding response regulator	NA	NA	NA	NA
WP_029143031.1\|2805226_2806639_-	sodium:solute symporter	NA	NA	NA	NA
WP_080651047.1\|2808047_2809244_-	MFS transporter	NA	NA	NA	NA
WP_013860842.1\|2809475_2810939_-\|transposase	transposase	NA	NA	NA	NA
WP_013860842.1\|2811212_2812676_-\|transposase	transposase	NA	NA	NA	NA
WP_029142375.1\|2813296_2813533_-	hypothetical protein	NA	NA	NA	NA
WP_029142376.1\|2813986_2814415_+	transcriptional regulator	NA	NA	NA	NA
WP_029142377.1\|2814411_2815611_+	MFS transporter	NA	NA	NA	NA
WP_029142378.1\|2815892_2816879_+	LacI family transcriptional regulator	NA	NA	NA	NA
WP_029142379.1\|2816875_2817094_+	hypothetical protein	NA	NA	NA	NA
WP_029142380.1\|2817077_2819075_+	beta-galactosidase LacZ	NA	NA	NA	NA
WP_029142381.1\|2819087_2819327_+	hypothetical protein	NA	NA	NA	NA
WP_017552576.1\|2819463_2820141_-	ABC transporter permease	NA	NA	NA	NA
WP_019720483.1\|2820143_2821058_-	osmoprotectant ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_029142382.1\|2821073_2821727_-	ABC transporter permease	NA	NA	NA	NA
WP_019720481.1\|2821738_2822884_-	glycine/betaine ABC transporter ATP-binding protein	F2Y1V5	Organic_Lake_phycodnavirus	3.3e-13	28.3
WP_029142383.1\|2823081_2823627_+	GbsR/MarR family transcriptional regulator	NA	NA	NA	NA
WP_029142384.1\|2823641_2824202_+	acetyltransferase	NA	NA	NA	NA
WP_029142385.1\|2825609_2825876_-	hypothetical protein	NA	NA	NA	NA
WP_013858390.1\|2825862_2826156_-	hypothetical protein	NA	NA	NA	NA
WP_013858391.1\|2826305_2826878_-	cupin domain-containing protein	NA	NA	NA	NA
WP_029142386.1\|2827181_2827997_+	SGNH/GDSL hydrolase family protein	NA	NA	NA	NA
WP_029142387.1\|2828620_2829337_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_029142388.1\|2829366_2829888_-	hypothetical protein	A0A1S5V000	Saudi_moumouvirus	5.7e-05	32.9
WP_029142389.1\|2830039_2831617_+	ATP-binding protein	NA	NA	NA	NA
WP_013858398.1\|2831570_2832536_+\|transposase	transposase	NA	NA	NA	NA
WP_029142390.1\|2833031_2834114_-	oxidoreductase	NA	NA	NA	NA
WP_029142391.1\|2834360_2835458_-	quinolinate synthase NadA	NA	NA	NA	NA
WP_029142392.1\|2835454_2836306_-	nicotinate-nucleotide diphosphorylase (carboxylating)	NA	NA	NA	NA
WP_029142393.1\|2836274_2837867_-	L-aspartate oxidase	NA	NA	NA	NA
WP_029142394.1\|2837950_2839096_+	IscS subfamily cysteine desulfurase	H7BUW1	unidentified_phage	4.0e-27	33.8
WP_080775329.1\|2840275_2841613_+\|transposase	transposase	NA	NA	NA	NA
WP_029143144.1\|2841997_2842729_+	hypothetical protein	NA	NA	NA	NA
WP_029143145.1\|2842741_2843443_+	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	3.8e-12	24.7
WP_029142741.1\|2845412_2845940_+	NYN domain-containing protein	NA	NA	NA	NA
WP_017552435.1\|2847751_2848618_-	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA
WP_029142742.1\|2848622_2850320_-	heme ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	3.2e-17	28.9
WP_013858409.1\|2850340_2850895_-	DUF3816 family protein	NA	NA	NA	NA
WP_013858410.1\|2850908_2851763_-	DNA-directed RNA polymerase subunit delta	NA	NA	NA	NA
WP_029713871.1\|2852116_2852371_-	hypothetical protein	NA	NA	NA	NA
WP_029713872.1\|2852467_2852836_+	hypothetical protein	NA	NA	NA	NA
WP_029142745.1\|2853077_2854841_+	DUF2339 domain-containing protein	NA	NA	NA	NA
WP_013858418.1\|2855208_2855532_+	hypothetical protein	NA	NA	NA	NA
WP_013858419.1\|2855528_2855804_+	hypothetical protein	NA	NA	NA	NA
WP_017554085.1\|2855841_2856672_+	hypothetical protein	I6XE30	Staphylococcus_phage	4.8e-30	34.7
WP_019722143.1\|2856866_2857862_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_029142746.1\|2858259_2859030_+	phosphonate ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	5.2e-23	36.8
WP_013858423.1\|2859029_2859809_+	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA
WP_029142747.1\|2859805_2860069_+	hypothetical protein	NA	NA	NA	NA
WP_035180873.1\|2860255_2861047_-	ATPase AAA	NA	NA	NA	NA
WP_042512385.1\|2861050_2862433_-\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_14

3038219 : 3098309

Streptococcus_phage(25.0%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_035180300.1\|3038219_3039503_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_029142740.1\|3039718_3040579_+	hypothetical protein	NA	NA	NA	NA
WP_029142739.1\|3040578_3040974_+	VOC family protein	NA	NA	NA	NA
WP_029142738.1\|3041071_3042019_+	mannose-6-phosphate isomerase, class I	NA	NA	NA	NA
WP_019721663.1\|3042110_3043016_+	homoserine O-succinyltransferase	NA	NA	NA	NA
WP_029142737.1\|3043113_3044592_-	MFS transporter	NA	NA	NA	NA
WP_029142736.1\|3044793_3045927_+	N-acetylglucosamine-6-phosphate deacetylase	NA	NA	NA	NA
WP_029142735.1\|3046152_3046881_+	glucosamine-6-phosphate deaminase	NA	NA	NA	NA
WP_013858594.1\|3046873_3047584_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_029142734.1\|3047682_3048945_-	peptidoglycan endopeptidase	A0A0A7NU10	Lactobacillus_phage	1.3e-23	41.4
WP_029142733.1\|3049058_3049295_+	hypothetical protein	NA	NA	NA	NA
WP_029142732.1\|3049411_3050914_-	chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	4.7e-12	25.8
WP_029142731.1\|3051031_3053038_+	penicillin-binding protein 2A	NA	NA	NA	NA
WP_013858600.1\|3053529_3054567_+	undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase	NA	NA	NA	NA
WP_013858601.1\|3054878_3055517_-	YigZ family protein	A0A1X9I5T8	Streptococcus_phage	6.4e-35	39.2
WP_029143125.1\|3055789_3056953_+	histidine kinase	NA	NA	NA	NA
WP_013858603.1\|3056955_3057639_+	DNA-binding response regulator	NA	NA	NA	NA
WP_029143126.1\|3057662_3057923_+	hypothetical protein	NA	NA	NA	NA
WP_035180264.1\|3057919_3059344_-	amino acid permease	NA	NA	NA	NA
WP_017553672.1\|3059909_3060752_+	DegV family protein	NA	NA	NA	NA
WP_029142532.1\|3061047_3062433_+	helicase	A0A1X9I5S6	Streptococcus_phage	5.4e-63	36.4
WP_029142533.1\|3062425_3063133_+	ComF family protein	NA	NA	NA	NA
WP_029142534.1\|3063199_3063595_+	membrane protein	NA	NA	NA	NA
WP_013858611.1\|3063665_3063932_+	flagellar biosynthesis anti-sigma factor FlgM	NA	NA	NA	NA
WP_029142535.1\|3063944_3064415_+	flagellar protein FlgN	NA	NA	NA	NA
WP_029142536.1\|3064437_3066054_+	flagellar hook-associated protein FlgK	NA	NA	NA	NA
WP_029142537.1\|3066068_3066962_+	flagellar hook-associated protein FlgL	NA	NA	NA	NA
WP_017553664.1\|3067169_3067619_+	flagellar assembly protein FliW	NA	NA	NA	NA
WP_029142539.1\|3067623_3067863_+	carbon storage regulator	H2BD56	Pseudomonas_phage	1.9e-08	52.9
WP_080588395.1\|3067975_3068242_+	hypothetical protein	NA	NA	NA	NA
WP_029142540.1\|3068294_3069446_+	flagellin	NA	NA	NA	NA
WP_073193845.1\|3069768_3069903_+	flagellin	NA	NA	NA	NA
WP_013858659.1\|3070591_3071155_+	glycerol-3-phosphate responsive antiterminator	NA	NA	NA	NA
WP_029713842.1\|3071195_3071894_-	MgtC/SapB transporter	G3MA03	Bacillus_virus	7.3e-16	35.6
WP_029142542.1\|3071886_3072714_-	haloacid dehalogenase	NA	NA	NA	NA
WP_029142543.1\|3072808_3073585_-	sugar phosphate isomerase/epimerase	NA	NA	NA	NA
WP_029142544.1\|3073568_3074927_-	MFS transporter	NA	NA	NA	NA
WP_029142545.1\|3075364_3076777_+	amino acid permease	NA	NA	NA	NA
WP_029142546.1\|3077154_3079575_+\|protease	ATP-dependent protease	NA	NA	NA	NA
WP_029142547.1\|3079933_3080179_+	hypothetical protein	NA	NA	NA	NA
WP_035180873.1\|3081823_3082615_-	ATPase AAA	NA	NA	NA	NA
WP_042512385.1\|3082618_3084001_-\|transposase	transposase	NA	NA	NA	NA
WP_080775331.1\|3084146_3084575_-	hypothetical protein	NA	NA	NA	NA
WP_042512468.1\|3085791_3086910_+\|transposase	transposase	A0A288TXV8	Enterococcus_phage	1.1e-77	47.5
WP_029143073.1\|3087423_3088023_+	DNA-3-methyladenine glycosylase	NA	NA	NA	NA
WP_029143072.1\|3088233_3088488_-	hypothetical protein	NA	NA	NA	NA
WP_029143071.1\|3088787_3089156_+	flagellar protein FlaG	NA	NA	NA	NA
WP_029143070.1\|3089169_3091251_+	flagellar hook protein FliD	NA	NA	NA	NA
WP_029143081.1\|3091265_3091670_+	flagella export chaperone FliS	NA	NA	NA	NA
WP_029143082.1\|3091666_3092014_+	flagellar protein FliT	NA	NA	NA	NA
WP_029143083.1\|3092278_3092839_+	ribosomal subunit interface protein	NA	NA	NA	NA
WP_035176811.1\|3093326_3094931_+	gamma-glutamyltransferase family protein	NA	NA	NA	NA
WP_003352379.1\|3095161_3095302_-	ribbon-helix-helix protein, CopG family	NA	NA	NA	NA
WP_042512469.1\|3095389_3096508_+\|transposase	transposase	A0A288TXV8	Enterococcus_phage	2.2e-78	47.8
WP_080775330.1\|3096893_3098309_+\|transposase	ISLre2 family transposase	NA	NA	NA	NA

DBSCAN-SWA_15

3163561 : 3169594

Streptococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013858686.1\|3163561_3164509_+	thioredoxin-disulfide reductase	G3MA85	Bacillus_virus	9.7e-88	53.7
WP_042512474.1\|3164851_3165094_+	hypothetical protein	NA	NA	NA	NA
WP_013858688.1\|3165145_3165604_+	8-oxo-dGTP diphosphatase	A0A1S6UAL7	Serratia_phage	2.6e-06	35.2
WP_017551709.1\|3165640_3166531_+	RNase adapter RapZ	A0A0R8VB27	Thermobifida_phage	4.3e-05	29.8
WP_029141765.1\|3166527_3167508_+	YvcK family protein	A1IMD5	Streptococcus_phage	2.0e-67	44.3
WP_029141764.1\|3167588_3168542_+	DNA-binding protein WhiA	Q7AWZ3	Streptococcus_phage	2.1e-53	39.1
WP_014095819.1\|3168652_3168922_+	HPr family phosphocarrier protein	NA	NA	NA	NA
WP_013858693.1\|3169003_3169594_-	ATP-dependent Clp endopeptidase, proteolytic subunit ClpP	A0A223W000	Agrobacterium_phage	1.7e-53	56.0

Anti-CRISPR protein detection

Acr_ID: NZ_CP009709.1|WP_029142832.1|2496234_2496426_+|hypothetical-protein

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Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_CP009709.1|WP_029142832.1|2496234_2496426_+|hypothetical-protein

2496234_2496426_+

63 aa aa

2430720-2530851

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location
NZ_CP009709_4	TypeI	4.43\|1539473\|34\|NZ_CP009709\|PILER-CR,CRISPRCasFinder,CRT	1539473-1539506	34	2446252-2446219
NZ_CP009709_4	TypeI	4.43\|1539473\|34\|NZ_CP009709\|PILER-CR,CRISPRCasFinder,CRT	1539473-1539506	34	2503570-2503537
NZ_CP009709_6	Orphan	6.19\|2585408\|35\|NZ_CP009709\|PILER-CR,CRISPRCasFinder,CRT	2585408-2585442	35	2448386-2448352
NZ_CP009709_7	TypeI	7.11\|2786286\|33\|NZ_CP009709\|CRISPRCasFinder,CRT,PILER-CR	2786286-2786318	33	2468905-2468937

1. spacer 4.43|1539473|34|NZ_CP009709|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009709 position: 2446252-2446219, mismatch: 0

ggacaattgggaacgcctgctaacaaaattataa	CRISPR spacer
ggacaattgggaacgcctgctaacaaaattataa	Protospacer
**********************************

2. spacer 4.43|1539473|34|NZ_CP009709|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009709 position: 2503570-2503537, mismatch: 0

ggacaattgggaacgcctgctaacaaaattataa	CRISPR spacer
ggacaattgggaacgcctgctaacaaaattataa	Protospacer
**********************************

3. spacer 6.19|2585408|35|NZ_CP009709|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009709 position: 2448386-2448352, mismatch: 0

ttaaaaaagctggagtaaggcatatccgcctgcac	CRISPR spacer
ttaaaaaagctggagtaaggcatatccgcctgcac	Protospacer
***********************************

4. spacer 7.11|2786286|33|NZ_CP009709|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009709 position: 2468905-2468937, mismatch: 0

atggatagcgactataaactcccagaaatatat	CRISPR spacer
atggatagcgactataaactcccagaaatatat	Protospacer
*********************************

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP009709

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

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