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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP009757 Yersinia pseudotuberculosis strain MD67 chromosome, complete genome 9 crisprs DinG,DEDDh,cas3,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,csa3 1 12 6 1

Results visualization

1. NZ_CP009757
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009757_1 881889-882010 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009757_2 1006087-1006835 Orphan I-F
12 spacers
DEDDh

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009757_3 1995606-1996473 TypeI-F I-F
14 spacers
cas1,cas3f,cas8f,cas5f,cas7f,cas6f

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009757_4 2188207-2188318 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009757_5 2270883-2270979 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009757_6 3048667-3048746 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009757_7 3791554-3791642 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009757_8 3897317-3897429 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009757_9 4139936-4140034 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP009757_3 3.1|1995634|32|NZ_CP009757|CRISPRCasFinder,CRT 1995634-1995665 32 NZ_CP009757.1 873193-873224 2 0.938

1. spacer 3.1|1995634|32|NZ_CP009757|CRISPRCasFinder,CRT matches to position: 873193-873224, mismatch: 2, identity: 0.938

cccagcgtcgggtcggatacttgccacgtaac	CRISPR spacer
cccagcgccgggtcggatacttgccacgcaac	Protospacer
*******.********************.***

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP009757_3 3.13|1996354|32|NZ_CP009757|CRISPRCasFinder,CRT,PILER-CR 1996354-1996385 32 MK733259 Yersinia phage YeP1, complete genome 32019-32050 3 0.906
NZ_CP009757_3 3.13|1996354|32|NZ_CP009757|CRISPRCasFinder,CRT,PILER-CR 1996354-1996385 32 MK733261 Yersinia phage YeP3, complete genome 32279-32310 3 0.906
NZ_CP009757_3 3.13|1996354|32|NZ_CP009757|CRISPRCasFinder,CRT,PILER-CR 1996354-1996385 32 MK733260 Yersinia phage YeP2, complete genome 32279-32310 3 0.906
NZ_CP009757_3 3.5|1995874|32|NZ_CP009757|CRISPRCasFinder,CRT,PILER-CR 1995874-1995905 32 NZ_CP013709 Clostridium botulinum strain F634 plasmid pRSJ2_2, complete sequence 52700-52731 5 0.844
NZ_CP009757_3 3.5|1995874|32|NZ_CP009757|CRISPRCasFinder,CRT,PILER-CR 1995874-1995905 32 NZ_CP013844 Clostridium botulinum strain A634 plasmid pRSJ19_2, complete sequence 98138-98169 5 0.844
NZ_CP009757_3 3.10|1996174|32|NZ_CP009757|CRISPRCasFinder,CRT,PILER-CR 1996174-1996205 32 LR597641 Escherichia phage mEp460_ev081 genome assembly, chromosome: 1 30916-30947 6 0.812
NZ_CP009757_3 3.11|1996234|32|NZ_CP009757|CRISPRCasFinder,CRT,PILER-CR 1996234-1996265 32 NZ_CP034768 Enterobacter sp. N18-03635 plasmid pFRI-6, complete sequence 111807-111838 6 0.812
NZ_CP009757_3 3.11|1996234|32|NZ_CP009757|CRISPRCasFinder,CRT,PILER-CR 1996234-1996265 32 NZ_AP019534 Enterobacter asburiae strain MRY18-106 plasmid pMRY18-106EAS_1, complete sequence 60914-60945 6 0.812
NZ_CP009757_3 3.11|1996234|32|NZ_CP009757|CRISPRCasFinder,CRT,PILER-CR 1996234-1996265 32 NZ_AP019534 Enterobacter asburiae strain MRY18-106 plasmid pMRY18-106EAS_1, complete sequence 84418-84449 6 0.812
NZ_CP009757_3 3.11|1996234|32|NZ_CP009757|CRISPRCasFinder,CRT,PILER-CR 1996234-1996265 32 NZ_AP019633 Enterobacter asburiae strain 1808-013 plasmid pEAS1808-013-1, complete sequence 113628-113659 6 0.812
NZ_CP009757_3 3.11|1996234|32|NZ_CP009757|CRISPRCasFinder,CRT,PILER-CR 1996234-1996265 32 NZ_AP019631 Enterobacter asburiae strain 17Nkhm-UP2 plasmid pEAS17Nkhm-UP2-1, complete sequence 82583-82614 6 0.812
NZ_CP009757_3 3.11|1996234|32|NZ_CP009757|CRISPRCasFinder,CRT,PILER-CR 1996234-1996265 32 NZ_AP019631 Enterobacter asburiae strain 17Nkhm-UP2 plasmid pEAS17Nkhm-UP2-1, complete sequence 106287-106318 6 0.812
NZ_CP009757_2 2.6|1006415|32|NZ_CP009757|PILER-CR,CRISPRCasFinder,CRT 1006415-1006446 32 NZ_CP048628 Megamonas funiformis strain JCM 14723 plasmid putative_Mfuni1, complete sequence 43858-43889 7 0.781
NZ_CP009757_2 2.10|1006656|32|NZ_CP009757|PILER-CR,CRISPRCasFinder,CRT 1006656-1006687 32 NZ_CP018742 Bacillus cereus strain FORC_047 plasmid pFORC47_2, complete sequence 160965-160996 7 0.781
NZ_CP009757_2 2.11|1006716|32|NZ_CP009757|PILER-CR,CRISPRCasFinder,CRT 1006716-1006747 32 NC_011368 Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG201, complete sequence 270051-270082 7 0.781
NZ_CP009757_2 2.11|1006716|32|NZ_CP009757|PILER-CR,CRISPRCasFinder,CRT 1006716-1006747 32 NC_020062 Rhizobium tropici CIAT 899 plasmid pRtrCIAT899c, complete sequence 1676974-1677005 7 0.781
NZ_CP009757_2 2.3|1006235|32|NZ_CP009757|PILER-CR,CRISPRCasFinder,CRT 1006235-1006266 32 NZ_CP025929 Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence 146877-146908 8 0.75
NZ_CP009757_3 3.3|1995754|32|NZ_CP009757|CRISPRCasFinder,CRT,PILER-CR 1995754-1995785 32 NZ_AP019370 Silvanigrellales bacterium RF1110005 plasmid 68K, complete sequence 29007-29038 8 0.75
NZ_CP009757_3 3.3|1995754|32|NZ_CP009757|CRISPRCasFinder,CRT,PILER-CR 1995754-1995785 32 NZ_CP009219 Rickettsiales bacterium Ac37b plasmid 2, complete sequence 10292-10323 8 0.75
NZ_CP009757_3 3.3|1995754|32|NZ_CP009757|CRISPRCasFinder,CRT,PILER-CR 1995754-1995785 32 NZ_LR214986 Mycoplasma cynos strain NCTC10142 plasmid 13 22199-22230 8 0.75
NZ_CP009757_9 9.1|4139969|33|NZ_CP009757|CRISPRCasFinder 4139969-4140001 33 NZ_KX274135 Staphylococcus arlettae strain SA-01 plasmid pSA-01, complete sequence 60674-60706 8 0.758
NZ_CP009757_2 2.2|1006175|32|NZ_CP009757|PILER-CR,CRISPRCasFinder,CRT 1006175-1006206 32 NC_008760 Polaromonas naphthalenivorans CJ2 plasmid pPNAP04, complete sequence 128446-128477 9 0.719
NZ_CP009757_2 2.10|1006656|32|NZ_CP009757|PILER-CR,CRISPRCasFinder,CRT 1006656-1006687 32 NZ_CP028373 Campylobacter jejuni subsp. jejuni strain huA17 plasmid unnamed1, complete sequence 40985-41016 9 0.719
NZ_CP009757_2 2.10|1006656|32|NZ_CP009757|PILER-CR,CRISPRCasFinder,CRT 1006656-1006687 32 NZ_CP018901 Campylobacter coli strain YH502 plasmid pCOS502, complete sequence 49228-49259 9 0.719
NZ_CP009757_2 2.10|1006656|32|NZ_CP009757|PILER-CR,CRISPRCasFinder,CRT 1006656-1006687 32 NZ_CP014345 Campylobacter jejuni strain RM3194 plasmid unnamed, complete sequence 19288-19319 9 0.719
NZ_CP009757_2 2.10|1006656|32|NZ_CP009757|PILER-CR,CRISPRCasFinder,CRT 1006656-1006687 32 NZ_CP048772 Campylobacter jejuni strain ZS007 plasmid pCJ145K, complete sequence 31830-31861 9 0.719
NZ_CP009757_2 2.10|1006656|32|NZ_CP009757|PILER-CR,CRISPRCasFinder,CRT 1006656-1006687 32 AP013580 Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C16-MedDCM-OCT-S43-C44, *** SEQUENCING IN PROGRESS *** 16672-16703 9 0.719
NZ_CP009757_3 3.2|1995694|32|NZ_CP009757|CRISPRCasFinder,CRT,PILER-CR 1995694-1995725 32 NZ_CP032703 Pantoea dispersa strain DSM 32899 plasmid unnamed1, complete sequence 47746-47777 9 0.719
NZ_CP009757_3 3.3|1995754|32|NZ_CP009757|CRISPRCasFinder,CRT,PILER-CR 1995754-1995785 32 MN694161 Marine virus AFVG_250M528, complete genome 58757-58788 9 0.719
NZ_CP009757_3 3.3|1995754|32|NZ_CP009757|CRISPRCasFinder,CRT,PILER-CR 1995754-1995785 32 MH327490 Marine virus AG-345-A17 Ga0172217_11 genomic sequence 430-461 10 0.688
NZ_CP009757_3 3.3|1995754|32|NZ_CP009757|CRISPRCasFinder,CRT,PILER-CR 1995754-1995785 32 AP013813 Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C15-MedDCM-OCT-S41-C199, *** SEQUENCING IN PROGRESS *** 8732-8763 10 0.688
NZ_CP009757_3 3.3|1995754|32|NZ_CP009757|CRISPRCasFinder,CRT,PILER-CR 1995754-1995785 32 AP013561 Uncultured Mediterranean phage uvMED isolate uvMED-CGR-C15D-MedDCM-OCT-S44-C14, *** SEQUENCING IN PROGRESS ***, 10 ordered pieces 4625-4656 10 0.688
NZ_CP009757_3 3.3|1995754|32|NZ_CP009757|CRISPRCasFinder,CRT,PILER-CR 1995754-1995785 32 AP013810 Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C15-MedDCM-OCT-S33-C191, *** SEQUENCING IN PROGRESS *** 487-518 10 0.688
NZ_CP009757_3 3.3|1995754|32|NZ_CP009757|CRISPRCasFinder,CRT,PILER-CR 1995754-1995785 32 AP014452 Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C15-MedDCM-OCT-S29-C199, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces 2783-2814 10 0.688
NZ_CP009757_3 3.3|1995754|32|NZ_CP009757|CRISPRCasFinder,CRT,PILER-CR 1995754-1995785 32 AP013843 Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C15D-MedDCM-OCT-S42-C21, *** SEQUENCING IN PROGRESS *** 468-499 10 0.688

1. spacer 3.13|1996354|32|NZ_CP009757|CRISPRCasFinder,CRT,PILER-CR matches to MK733259 (Yersinia phage YeP1, complete genome) position: , mismatch: 3, identity: 0.906

caccacagttgagctctccggagataccggat	CRISPR spacer
ccccacagttgaactctccggagataccggaa	Protospacer
* **********.****************** 

2. spacer 3.13|1996354|32|NZ_CP009757|CRISPRCasFinder,CRT,PILER-CR matches to MK733261 (Yersinia phage YeP3, complete genome) position: , mismatch: 3, identity: 0.906

caccacagttgagctctccggagataccggat	CRISPR spacer
ccccacagttgaactctccggagataccggaa	Protospacer
* **********.****************** 

3. spacer 3.13|1996354|32|NZ_CP009757|CRISPRCasFinder,CRT,PILER-CR matches to MK733260 (Yersinia phage YeP2, complete genome) position: , mismatch: 3, identity: 0.906

caccacagttgagctctccggagataccggat	CRISPR spacer
ccccacagttgaactctccggagataccggaa	Protospacer
* **********.****************** 

4. spacer 3.5|1995874|32|NZ_CP009757|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013709 (Clostridium botulinum strain F634 plasmid pRSJ2_2, complete sequence) position: , mismatch: 5, identity: 0.844

aagtagacccgattagtaattttcaatttggc--	CRISPR spacer
aagtaaaccagattagtaattttc--tttgggaa	Protospacer
*****.*** **************  *****   

5. spacer 3.5|1995874|32|NZ_CP009757|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013844 (Clostridium botulinum strain A634 plasmid pRSJ19_2, complete sequence) position: , mismatch: 5, identity: 0.844

aagtagacccgattagtaattttcaatttggc--	CRISPR spacer
aagtaaaccagattagtaattttc--tttgggaa	Protospacer
*****.*** **************  *****   

6. spacer 3.10|1996174|32|NZ_CP009757|CRISPRCasFinder,CRT,PILER-CR matches to LR597641 (Escherichia phage mEp460_ev081 genome assembly, chromosome: 1) position: , mismatch: 6, identity: 0.812

tatccagttcatcttccgataagtccaagtca	CRISPR spacer
tctctaactcatcttccgataagtctaaggca	Protospacer
* **.*..*****************.*** **

7. spacer 3.11|1996234|32|NZ_CP009757|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034768 (Enterobacter sp. N18-03635 plasmid pFRI-6, complete sequence) position: , mismatch: 6, identity: 0.812

cccaaggattttcgggactttcatgatcaaaa	CRISPR spacer
gaccatgattttcaagactttcatgatcaaaa	Protospacer
  * * *******..*****************

8. spacer 3.11|1996234|32|NZ_CP009757|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP019534 (Enterobacter asburiae strain MRY18-106 plasmid pMRY18-106EAS_1, complete sequence) position: , mismatch: 6, identity: 0.812

cccaaggattttcgggactttcatgatcaaaa	CRISPR spacer
gaccatgattttcaagactttcatgatcaaaa	Protospacer
  * * *******..*****************

9. spacer 3.11|1996234|32|NZ_CP009757|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP019534 (Enterobacter asburiae strain MRY18-106 plasmid pMRY18-106EAS_1, complete sequence) position: , mismatch: 6, identity: 0.812

cccaaggattttcgggactttcatgatcaaaa	CRISPR spacer
gaccatgattttcaagactttcatgatcaaaa	Protospacer
  * * *******..*****************

10. spacer 3.11|1996234|32|NZ_CP009757|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP019633 (Enterobacter asburiae strain 1808-013 plasmid pEAS1808-013-1, complete sequence) position: , mismatch: 6, identity: 0.812

cccaaggattttcgggactttcatgatcaaaa	CRISPR spacer
gaccatgattttcaagactttcatgatcaaaa	Protospacer
  * * *******..*****************

11. spacer 3.11|1996234|32|NZ_CP009757|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP019631 (Enterobacter asburiae strain 17Nkhm-UP2 plasmid pEAS17Nkhm-UP2-1, complete sequence) position: , mismatch: 6, identity: 0.812

cccaaggattttcgggactttcatgatcaaaa	CRISPR spacer
gaccatgattttcaagactttcatgatcaaaa	Protospacer
  * * *******..*****************

12. spacer 3.11|1996234|32|NZ_CP009757|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP019631 (Enterobacter asburiae strain 17Nkhm-UP2 plasmid pEAS17Nkhm-UP2-1, complete sequence) position: , mismatch: 6, identity: 0.812

cccaaggattttcgggactttcatgatcaaaa	CRISPR spacer
gaccatgattttcaagactttcatgatcaaaa	Protospacer
  * * *******..*****************

13. spacer 2.6|1006415|32|NZ_CP009757|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP048628 (Megamonas funiformis strain JCM 14723 plasmid putative_Mfuni1, complete sequence) position: , mismatch: 7, identity: 0.781

ggttg--ccacaaagtattcaaccagccatttta	CRISPR spacer
--ttgatgcacaaagtattcaacgagacattaaa	Protospacer
  ***   *************** ** ****  *

14. spacer 2.10|1006656|32|NZ_CP009757|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018742 (Bacillus cereus strain FORC_047 plasmid pFORC47_2, complete sequence) position: , mismatch: 7, identity: 0.781

atctttaaacatatttaaatctattgctaatt	CRISPR spacer
ttttttaaacatatttaaatcaatagctgcat	Protospacer
 *.****************** ** ***.  *

15. spacer 2.11|1006716|32|NZ_CP009757|PILER-CR,CRISPRCasFinder,CRT matches to NC_011368 (Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG201, complete sequence) position: , mismatch: 7, identity: 0.781

tcaaaaacctgatggcagtggcccggcaatat	CRISPR spacer
tcggcttcctgatggcagtcgccaggcaatat	Protospacer
**..   ************ *** ********

16. spacer 2.11|1006716|32|NZ_CP009757|PILER-CR,CRISPRCasFinder,CRT matches to NC_020062 (Rhizobium tropici CIAT 899 plasmid pRtrCIAT899c, complete sequence) position: , mismatch: 7, identity: 0.781

tcaaaaacctgatggcagtggcccggcaatat	CRISPR spacer
tcggtttcctgatggcggtggcccggcagtat	Protospacer
**..   *********.***********.***

17. spacer 2.3|1006235|32|NZ_CP009757|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.75

atgaaagaattagatagtt----tcactgtagagag	CRISPR spacer
atgaaaaaattagatagtttccctcactttga----	Protospacer
******.************    ***** *..    

18. spacer 3.3|1995754|32|NZ_CP009757|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP019370 (Silvanigrellales bacterium RF1110005 plasmid 68K, complete sequence) position: , mismatch: 8, identity: 0.75

aaaataaagtaatagaagtcattagcgtgtct---	CRISPR spacer
caaataaaggaaaagaagtcattag---atttaaa	Protospacer
 ******** ** ************   .*.*   

19. spacer 3.3|1995754|32|NZ_CP009757|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009219 (Rickettsiales bacterium Ac37b plasmid 2, complete sequence) position: , mismatch: 8, identity: 0.75

aaaataaagtaatagaagtcattagcgtgtct	CRISPR spacer
aaaataaaataatagatgtcattatagtagta	Protospacer
********.******* *******  **. . 

20. spacer 3.3|1995754|32|NZ_CP009757|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR214986 (Mycoplasma cynos strain NCTC10142 plasmid 13) position: , mismatch: 8, identity: 0.75

aaaataaagtaatagaagtcattagcgtgtct	CRISPR spacer
taaataaagtaaaagaattcattaaaatatat	Protospacer
 *********** **** ******. .*.* *

21. spacer 9.1|4139969|33|NZ_CP009757|CRISPRCasFinder matches to NZ_KX274135 (Staphylococcus arlettae strain SA-01 plasmid pSA-01, complete sequence) position: , mismatch: 8, identity: 0.758

attacgcgttttactgataaccccatgccaaag	CRISPR spacer
aaaaatcgttttgctgataacctcatgccattg	Protospacer
*  *  ******.*********.*******  *

22. spacer 2.2|1006175|32|NZ_CP009757|PILER-CR,CRISPRCasFinder,CRT matches to NC_008760 (Polaromonas naphthalenivorans CJ2 plasmid pPNAP04, complete sequence) position: , mismatch: 9, identity: 0.719

gtattgcacggcaagagcgcataaggaatgtt	CRISPR spacer
caggcgcagggcaagagcgcacaaggaatcct	Protospacer
  . .*** ************.******* .*

23. spacer 2.10|1006656|32|NZ_CP009757|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028373 (Campylobacter jejuni subsp. jejuni strain huA17 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

atctttaaacatatttaaatctattgctaatt	CRISPR spacer
aaacaaacacttatctaaatctattgctaatg	Protospacer
*  .  * ** ***.**************** 

24. spacer 2.10|1006656|32|NZ_CP009757|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018901 (Campylobacter coli strain YH502 plasmid pCOS502, complete sequence) position: , mismatch: 9, identity: 0.719

atctttaaacatatttaaatctattgctaatt	CRISPR spacer
aaacaaacacttatctaaatctattgctaatg	Protospacer
*  .  * ** ***.**************** 

25. spacer 2.10|1006656|32|NZ_CP009757|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014345 (Campylobacter jejuni strain RM3194 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

atctttaaacatatttaaatctattgctaatt	CRISPR spacer
aaacaaacacttatctaaatctattgctaatg	Protospacer
*  .  * ** ***.**************** 

26. spacer 2.10|1006656|32|NZ_CP009757|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP048772 (Campylobacter jejuni strain ZS007 plasmid pCJ145K, complete sequence) position: , mismatch: 9, identity: 0.719

atctttaaacatatttaaatctattgctaatt	CRISPR spacer
aaacaaacacttatctaaatctattgctaatg	Protospacer
*  .  * ** ***.**************** 

27. spacer 2.10|1006656|32|NZ_CP009757|PILER-CR,CRISPRCasFinder,CRT matches to AP013580 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C16-MedDCM-OCT-S43-C44, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 9, identity: 0.719

atctttaaacatatttaaatctattgctaatt	CRISPR spacer
tccaattaaaataattaaatctattgctaaaa	Protospacer
 .*  * ** *** ****************  

28. spacer 3.2|1995694|32|NZ_CP009757|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032703 (Pantoea dispersa strain DSM 32899 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

tagagtgttttttctgacgatgttccttgctg	CRISPR spacer
cagagtgttttttctgccgacgttctgctttc	Protospacer
.*************** ***.****. . .* 

29. spacer 3.3|1995754|32|NZ_CP009757|CRISPRCasFinder,CRT,PILER-CR matches to MN694161 (Marine virus AFVG_250M528, complete genome) position: , mismatch: 9, identity: 0.719

aaaataaagtaatagaagtcattagcgtgtct	CRISPR spacer
aagggaaagcaatggaagtcattagcgtaata	Protospacer
**.. ****.***.**************. . 

30. spacer 3.3|1995754|32|NZ_CP009757|CRISPRCasFinder,CRT,PILER-CR matches to MH327490 (Marine virus AG-345-A17 Ga0172217_11 genomic sequence) position: , mismatch: 10, identity: 0.688

aaaataaagtaatagaagtcattagcgtgtct	CRISPR spacer
gtaataaagtaataaaattcattagttcatta	Protospacer
. ************.** *******. ..*. 

31. spacer 3.3|1995754|32|NZ_CP009757|CRISPRCasFinder,CRT,PILER-CR matches to AP013813 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C15-MedDCM-OCT-S41-C199, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 10, identity: 0.688

aaaataaagtaatagaagtcattagcgtgtct	CRISPR spacer
gtaataaagtaataaaattcattagttcatta	Protospacer
. ************.** *******. ..*. 

32. spacer 3.3|1995754|32|NZ_CP009757|CRISPRCasFinder,CRT,PILER-CR matches to AP013561 (Uncultured Mediterranean phage uvMED isolate uvMED-CGR-C15D-MedDCM-OCT-S44-C14, *** SEQUENCING IN PROGRESS ***, 10 ordered pieces) position: , mismatch: 10, identity: 0.688

aaaataaagtaatagaagtcattagcgtgtct	CRISPR spacer
gtaataaagtaataaaattcattagttcatta	Protospacer
. ************.** *******. ..*. 

33. spacer 3.3|1995754|32|NZ_CP009757|CRISPRCasFinder,CRT,PILER-CR matches to AP013810 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C15-MedDCM-OCT-S33-C191, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 10, identity: 0.688

aaaataaagtaatagaagtcattagcgtgtct	CRISPR spacer
gtaataaagtaataaaattcattagttcatta	Protospacer
. ************.** *******. ..*. 

34. spacer 3.3|1995754|32|NZ_CP009757|CRISPRCasFinder,CRT,PILER-CR matches to AP014452 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C15-MedDCM-OCT-S29-C199, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces) position: , mismatch: 10, identity: 0.688

aaaataaagtaatagaagtcattagcgtgtct	CRISPR spacer
gtaataaagtaataaaattcattagttcatta	Protospacer
. ************.** *******. ..*. 

35. spacer 3.3|1995754|32|NZ_CP009757|CRISPRCasFinder,CRT,PILER-CR matches to AP013843 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C15D-MedDCM-OCT-S42-C21, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 10, identity: 0.688

aaaataaagtaatagaagtcattagcgtgtct	CRISPR spacer
gtaataaagtaataaaattcattagttcatta	Protospacer
. ************.** *******. ..*. 

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 33589 : 80990 51 Cronobacter_phage(63.33%) integrase,holin,head,portal,capsid,tail,terminase,tRNA attL 29875:29890|attR 56609:56624
DBSCAN-SWA_2 565274 : 609947 37 Pseudomonas_phage(23.81%) tail,protease,plate NA
DBSCAN-SWA_3 796289 : 923683 124 Pectobacterium_phage(20.41%) integrase,lysis,holin,head,transposase,tail,protease,terminase,plate,tRNA attL 831847:831870|attR 874203:874226
DBSCAN-SWA_4 1216240 : 1267408 58 Salmonella_phage(41.18%) integrase,lysis,holin,head,transposase,tail,capsid,portal,plate attL 1220552:1220567|attR 1277490:1277505
DBSCAN-SWA_5 3048749 : 3081144 37 Cronobacter_phage(78.57%) holin,head,tail,capsid,portal,terminase,tRNA NA
DBSCAN-SWA_6 4536436 : 4612140 56 Yellowstone_lake_phycodnavirus(22.22%) plate,transposase NA
Click the colored protein region to show detailed information
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
NZ_CP009757.1|WP_042592975.1|850429_850612_+|hypothetical-protein 850429_850612_+ 60 aa aa NA NA NA 796289-923683 yes