CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP007520	Mycoplasma yeatsii GM274B chromosome, complete genome	10 crisprs	NA	0	0	1	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP007520_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP007520_1

15408-15494

Orphan

Consensus_repeat	Method
CGGAATTCCGACTAAATTTCACGAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP007520_1

>merge|NZ_CP007520|1|15408-15494|CRISPRCasFinder
CGGAATTCCGACTAAATTTCACGAGTTGATATAATACTTATGATAAACTAGAGATAAATAACCGGAATTCCGACTAAATTTCACGAG

>NZ_CP007520|1|1|15408-15494|CRISPRCasFinder
CGGAATTCCGACTAAATTTCACGAG	TTGATATAATACTTATGATAAACTAGAGATAAATAAC
CGGAATTCCGACTAAATTTCACGAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007520.1\|WP_042733039.1\|24894_26445_-\|thiamine-biosynthesis-protein-ThiF	unknown	unknown	gnl\|CDD\|284977
NZ_CP007520.1\|WP_004428548.1\|20173_20773_+\|FMN-dependent-NADH-azoreductase	unknown	unknown	gnl\|CDD\|234946
NZ_CP007520.1\|WP_042733025.1\|4137_5574_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|240539
NZ_CP007520.1\|WP_042733024.1\|3340_4135_+\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	unknown	unknown	gnl\|CDD\|234708
NZ_CP007520.1\|WP_042733026.1\|5811_7716_+\|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-B	unknown	unknown	gnl\|CDD\|235542
NZ_CP007520.1\|WP_042733027.1\|7731_10218_+\|DNA-gyrase-subunit-A	unknown	unknown	gnl\|CDD\|235502
NZ_CP007520.1\|WP_042733030.1\|12904_13513_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007520.1\|WP_042733029.1\|11119_12706_-\|DEAD/DEAH-box-helicase-family-protein	unknown	unknown	gnl\|CDD\|350677
NZ_CP007520.1\|WP_042733033.1\|15503_16787_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|224292
NZ_CP007520.1\|WP_042733595.1\|20831_21872_-\|alcohol-dehydrogenase-AdhP	unknown	unknown	gnl\|CDD\|176257
NZ_CP007520.1\|WP_144402417.1\|23364_24726_-\|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-GTPase-MnmE	unknown	unknown	gnl\|CDD\|235392
NZ_CP007520.1\|WP_042733031.1\|13590_14199_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007520.1\|WP_042733036.1\|22074_22617_-\|lipoprotein	unknown	unknown	unknown
NZ_CP007520.1\|WP_042733032.1\|14191_15205_+\|nucleotidyl-transferase-AbiEii/AbiGii-toxin-family-protein	unknown	unknown	gnl\|CDD\|378065
NZ_CP007520.1\|WP_042733023.1\|2802_3339_+\|ribonuclease-M5	unknown	unknown	gnl\|CDD\|273019
NZ_CP007520.1\|WP_042733037.1\|22810_23290_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007520.1\|WP_042733022.1\|1635_2763_+\|DNA-polymerase-III-subunit-beta	unknown	unknown	gnl\|CDD\|238082
NZ_CP007520.1\|WP_174407385.1\|16938_18114_+\|DNA-(cytosine-5-)-methyltransferase	unknown	unknown	gnl\|CDD\|238192
NZ_CP007520.1\|WP_042733034.1\|18098_19286_+\|HNH-endonuclease	unknown	unknown	unknown
NZ_CP007520.1\|WP_042733035.1\|19291_20089_-\|TatD-family-hydrolase	unknown	unknown	gnl\|CDD\|238635

Protein	Function_ID	Function_description	E-value
NZ_CP007520.1\|WP_004428548.1\|20173_20773_+\|FMN-dependent-NADH-azoreductase	gnl\|CDD\|234946	PRK01355, PRK01355, azoreductase; Reviewed.	1.8743e-107
NZ_CP007520.1\|WP_042733025.1\|4137_5574_+\|hypothetical-protein	gnl\|CDD\|240539	cd13134, MATE_like_8, Uncharacterized subfamily of the multidrug and toxic compound extrusion (MATE) proteins. The integral membrane proteins from the MATE family are involved in exporting metabolites across the cell membrane and are responsible for multidrug resistance (MDR) in many bacteria and animals. A number of family members are involved in the synthesis of peptidoglycan components in bacteria.	4.93199e-37
NZ_CP007520.1\|WP_042733024.1\|3340_4135_+\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	gnl\|CDD\|234708	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA.	5.14215e-104
NZ_CP007520.1\|WP_042733026.1\|5811_7716_+\|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-B	gnl\|CDD\|235542	PRK05644, gyrB, DNA gyrase subunit B; Validated.	0
NZ_CP007520.1\|WP_042733027.1\|7731_10218_+\|DNA-gyrase-subunit-A	gnl\|CDD\|235502	PRK05560, PRK05560, DNA gyrase subunit A; Validated.	0
NZ_CP007520.1\|WP_042733029.1\|11119_12706_-\|DEAD/DEAH-box-helicase-family-protein	gnl\|CDD\|350677	cd17919, DEXHc_Snf, DEXH/Q-box helicase domain of DEAD-like helicase Snf family proteins. Sucrose Non-Fermenting (SNF) proteins DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	5.34089e-18
NZ_CP007520.1\|WP_042733033.1\|15503_16787_+\|ATP-binding-protein	gnl\|CDD\|224292	COG1373, COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only].	2.22297e-54
NZ_CP007520.1\|WP_042733595.1\|20831_21872_-\|alcohol-dehydrogenase-AdhP	gnl\|CDD\|176257	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	1.38136e-161
NZ_CP007520.1\|WP_144402417.1\|23364_24726_-\|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-GTPase-MnmE	gnl\|CDD\|235392	PRK05291, trmE, tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE.	8.55746e-175
NZ_CP007520.1\|WP_042733039.1\|24894_26445_-\|thiamine-biosynthesis-protein-ThiF	gnl\|CDD\|284977	pfam07672, MFS_Mycoplasma, Mycoplasma MFS transporter. These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).	4.15572e-32
NZ_CP007520.1\|WP_042733032.1\|14191_15205_+\|nucleotidyl-transferase-AbiEii/AbiGii-toxin-family-protein	gnl\|CDD\|378065	pfam08843, AbiEii, Nucleotidyl transferase AbiEii toxin, Type IV TA system. This family was recently identified as belonging to the nucleotidyltransferase superfamily. AbiEii is the cognate toxin of the type IV toxin-antitoxin 'innate immunity' bacterial abortive infection (Abi) system that protects bacteria from the spread of a phage infection. The Abi system is activated upon infection with phage to abort the cell thus preventing the spread of phage through viral replication. There are some 20 or more Abis, and they are predominantly plasmid-encoded lactococcal systems. TA, toxin-antitoxin, systems on plasmids function by killing cells that lose the plasmid upon division. AbiE phage resistance systems function as novel Type IV TAs and are widespread in bacteria and archaea. The cognate antitoxin is pfam13338.	5.87046e-26
NZ_CP007520.1\|WP_042733023.1\|2802_3339_+\|ribonuclease-M5	gnl\|CDD\|273019	TIGR00334, Ribonuclease_M5, ribonuclease M5. This family of orthologous proteins shows a weak but significant similarity to the central region of the DnaG-type DNA primase. The region of similarity is termed the Toprim (topoisomerase-primase) domain and is also shared by RecR, OLD family nucleases, and type IA and II topoisomerases. [Transcription, RNA processing].	4.39169e-34
NZ_CP007520.1\|WP_042733022.1\|1635_2763_+\|DNA-polymerase-III-subunit-beta	gnl\|CDD\|238082	cd00140, beta_clamp, Beta clamp domain. The beta subunit (processivity factor) of DNA polymerase III holoenzyme, refered to as the beta clamp, forms a ring shaped dimer that encircles dsDNA (sliding clamp) in bacteria. The beta-clamp is structurally similar to the trimeric ring formed by PCNA (found in eukaryotes and archaea) and the processivity factor (found in bacteriophages T4 and RB69). This structural correspondence further substantiates the mechanistic connection between eukaryotic and prokaryotic DNA replication that has been suggested on biochemical grounds. .	1.1957e-89
NZ_CP007520.1\|WP_174407385.1\|16938_18114_+\|DNA-(cytosine-5-)-methyltransferase	gnl\|CDD\|238192	cd00315, Cyt_C5_DNA_methylase, Cytosine-C5 specific DNA methylases; Methyl transfer reactions play an important role in many aspects of biology. Cytosine-specific DNA methylases are found both in prokaryotes and eukaryotes. DNA methylation, or the covalent addition of a methyl group to cytosine within the context of the CpG dinucleotide, has profound effects on the mammalian genome. These effects include transcriptional repression via inhibition of transcription factor binding or the recruitment of methyl-binding proteins and their associated chromatin remodeling factors, X chromosome inactivation, imprinting and the suppression of parasitic DNA sequences. DNA methylation is also essential for proper embryonic development and is an important player in both DNA repair and genome stability.	1.52597e-47
NZ_CP007520.1\|WP_042733035.1\|19291_20089_-\|TatD-family-hydrolase	gnl\|CDD\|238635	cd01310, TatD_DNAse, TatD like proteins; E.coli TatD is a cytoplasmic protein, shown to have magnesium dependent DNase activity.	1.32409e-103

>NZ_CP007520.1|WP_042733032.1|14191_15205_+|nucleotidyl-transferase-AbiEii/AbiGii-toxin-family-protein
MNKFYMGSNKDLNEIIKLTSNKIGIDRAIIEKDYWVSFLLDYIFNENKYSKSFTFKGGTSLSKCFNVIKRFSEDIDLILDWTLLGYEISEPYIERTIKSQSKFNIEMNKKSALFLKEEFIKNLENDLKDFNLEFYIDKEDENTIWCKYPTFFESSYIIQEIKLEIGCIATTTPFKEVEISSIIDDAFPKIFEKKSFLRAIEPERTFWEKTLILHSVCNKPEDKAFNTRYARHYYDLYCLANSSYKDKALQNIKLLKEATEFKKKFYWIKYANYDEVLENKKLKLIPSEFRIEQIRKDYVDMKSMFYGEIIEFDKILETLKNLEKEINDKLSKENIWN
>NZ_CP007520.1|WP_042733031.1|13590_14199_+|hypothetical-protein
MTYISQIQERINNFEYDKVFTSDDFLDIASSETVRRTLNRLAKDQKIRRIINGFYFTPKYVELIKEYGTFNVYELIDAIARKYNWDIAPFGLACLNILSLSTQVPAKVIFVSNGRNKTFNADGMTIEFRKVSSREISNMSLKTRIVIQAIKELGKGKIKKYHIDRIRWRLAEEEKQNLLVEARHTTKWIYEHIKEICKEENE
>NZ_CP007520.1|WP_042733030.1|12904_13513_+|hypothetical-protein
MTYISQIQSRINDLKNGKVFTSNDFIDIASSGTVRRILNKLVKEQKIRRIINGFYYSPRYSELIKEYEQVRIEELAKAIARKHNWDIAPFGLACLNILGLSTQVPVKVIYVSSGKSKIYKVGKMSLEFRKVSSREISNMSLKTRIVIQAIKELGKGKIEKYHIDRIRWELTKTEKQNLLVEARHTTKWIYEHIKEICKEESE
>NZ_CP007520.1|WP_042733029.1|11119_12706_-|DEAD/DEAH-box-helicase-family-protein
MTLFNKLKDFQKEVLLKNKDKTKLGLFLDMGLGKTILSLSFCEQFNADAIIVICPKPIAVKQESEKGSFADHLANDLNFTVYNRFQKNIDEVEFNKNQKEAMILNFESFIGEKDQELNYRIPLCLKNFVFAHRDQKIVIIIDESHRVKNSTTITSKVIADFIQRIEKYNKIFFNNVDKFRLYLLTGTPFSVGYVDVYNQLKFLGLEMTKTKFLENFAVRRNIKSLPEYKRPVKGYKNIEQLVELINNYAVCLRTEDVIELTNIKEEYIELPISKEFELLTQKEVLESDLFKFCNKNNIENNYKDDDCNIVFNPFYRNLSYPEYHWFATNSTGGYWLRSRQISIGFQGNEKNYKWFDYSRLEKLKELLSNNPDNYIIFYNYEAEYDEILKICQDLEYKIDTWNGKTKTDKYYKEYEKLKNTKTSKNKKRVIIANYASGSTGMNWQKYDKTIWFSVALYKNHAQSMKRNHRIGVENDIKYYVFYQNNFLDKSMIEARRNKKNYTEKMFIKEEKKNLKQGVIQNLKFEWAD
>NZ_CP007520.1|WP_042733027.1|7731_10218_+|DNA-gyrase-subunit-A
MDNQNNNQEHYHGKITQIDISSEVRKDFLEYAMSVIVSRALPDLKDGLKPVHRRIIYAMNDLGITADKPHKKSARIVGEVIGKYHPHGDSAVYESMVRMAQDFSYRYPLVDGHGNFGSIDGDGAAAMRYTEARLAKISNYIIKDIDMETVPFIDNYDASEKEPSYLPGYLPNLLVNGATGIAVGMATSIPPHNLREVVSALKAYIDNNEITIDEILDNHILGPDFPTGALMTNGQKMREGYKTGRGGVIIRAKVDLEETSRHSRFVITEIPYQVNKSKIIEKIAELVKTKTINGIADIRDESNYEGIRIVIDLKRDANPDVILSKLYKFTGLQSSFTINLLSLHNNLPVLLDLKSIIKYYVEFQVQVIIRRSIFEKNKIAKRYHILEALHKALDDVDHVIEIIKSSKTADEAKMLLTNKYGFDEEQNKAILDMRLQRLVGLEREKIWTEMQAIQERISYLDKLINDKDEQNSVLKDQLDEIANKYGDDRRTGLIDDKLINIQDEELIPDTKTMILLSSEGYIRRVDPDEFRTQKRGGRGVSVNAEPSDPIDLITMGKMRDWVLFFTNSGKVFRTKMYNIRQYSRTARGLPIVNFLNDLSPEDKITAILCFRNTKNKFEYLTFVTQNGMIKRTKVSEFENINRNGKKAITLKDDDQLVSVFATTGQDTIFVANESGKVIRVQEDKIRAMSRTGSGVKSIKLEDNDVVVGAVSSFKLSHITTVSNKGIFKKSLVDDYRISNRNTKGMKVMNLNEKTGKFKALIAARETDLIVIVSSDGNIIKTKVSNIPSLSRTATGVKGIRLDDGQEISAITLEYIKNPDDLKDFEDEE
>NZ_CP007520.1|WP_042733026.1|5811_7716_+|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-B
MSVNYDAESIKVLKGLEAVRKRPGMYIGSTSKTGLHHLVWEILDNSVDEAMAGYANKIDITLTVDGEVIVQDNGRGIPTGINQESGKSALELVFTQLHAGGKFDSDSYKISGGLHGVGASVVNALSLYVDVDVYRDNIHYHQYFSEGGTKESALENLGPTELRGTKVRFKPDPEIFKETVVFDYDVVRNKAKQLAYLNKGLRLTLTDQRVDKGVEYYFANGILDYIKEKNENKTTINPNIFYVDSKYKDIEVEVALQYNTDYQENLITFVNNINTLEGGTHEDGLKQALIRDINRYAENVIRSNKSNGKYSWDDIKEGMVCIVSVRHTDPQYEGQTKTKLSNLDAKEAVNEIIGQAFEEFLLKSPEDAKAILDKNANAQKARIAAQRAREETRRKSALDTFSLPGKLADCESKDASIAELYLVEGDSAGGSAKTGRNRRFQAILPLRGKVLNVERVTEARAFANNEIKSIITAIGTGIKEELDLSKLRYGKIVIMTDADVDGAHIRILLLTFFYRYMKELINNGNIYIAQPPLYKIESSKRVEYAYTDAELEALKNNEFKDTKYTIQRYKGLGEMDPLQLWETTMDPQQRTMLQISLDDAALANEVFSDLMGEDPELRKNYIQDNAKFVENIDV
>NZ_CP007520.1|WP_042733025.1|4137_5574_+|hypothetical-protein
MKFNLKKILYVKDFKYIMSLTIHIFLQLFFAAIISQINILLFSWYAGGTGFFVAVNKTTTLFITIQFIPGLVASGTLVVGSKLFGQNKEKELSKLITTGILINLTITLFVYILTCVFASTFLSWLDAKNEFIVTNNKYNQINELDFCVKYFQIINISLVIMSVVQVLVAGLQIISKQRHIAIGSILSNVVDIILVVLVLYAFDWNPIYASLGLVLAALFQLVYMIVVNVIHIDYRNWKFINQIEVKYMFETIKIGLPITLEIGLWNVCNFVANTAISHLYVNSTFIDQQQVINTFINLHRTLTAIVQYSITFLIAISTITSMLVAKMIGKNDKQKAFEIGIDCWKIAIYSQLLLSSITLVLTYPLLKAFNINTILINKYGYILMSVLFIKLLFDTANMTLLRALWSTGDLWVPLLISVITMISGMCLLPWLVSSTFKGDTGYGLVLIYLVISLDPILRSIIYTKRWFKRKWESRIKVV
>NZ_CP007520.1|WP_042733024.1|3340_4135_+|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA
MQVKAKKHFGQNFISDPKLISRIIDVLGDDSDQLIIEIGPGTGALTTELVKRFKKVVAIEIDKELESVLKSKINSDNFDFVLADVLTVDFESIIKQYDFKKVSIISNMPYYITSEILFKTLKISHLLNKAVFMMQKEVAVRLCANKNENNYNNLSVVCEFYSDRKYEFTVVKGMFRPIPKVDSAIVSLTFNDKFKTQVKDDQKFAEFVRKLFNNKRKTILNNLTNIVSDKNLALDYLNKANIDAKKRPEQLGLEEFILLFNLIG
>NZ_CP007520.1|WP_042733023.1|2802_3339_+|ribonuclease-M5
MLNKIKQVIIVEGKTDTQKLKNIFGNDIKTIETNGLSLDQKTLRIIKEFNNTVGVIIFTDPDGAGKKIREQIINYLDNKVLNAFITKQDVNKQYKKIGIAQADESAIKKALSDLIVYDKNNNSISWNDYVNNDFYLKSNRDKICKHFNFEKSISSKTLFKWLNWMNLKVKDIKEILGE
>NZ_CP007520.1|WP_042733022.1|1635_2763_+|DNA-polymerase-III-subunit-beta
MNIRINRTVLLDNLQKAVKLIDHRNTNPSLTGIYLNAENDKVSIISTNGTLSFKSILDNKNSDLEIKQEGKVIIKPRYVLEMLRKLEDEFVTLTMVENSELTIRTRNSDFNVSVLNADDYPLIGFREKGTEIVLNPNEVKKTIYQVIVSMNENNKKLVLTGLNLKVEDDKVIFSTTDSFRISQKILQANSKIVENVDITIPYKTVSELPKLLDNAKNLKIILFEGYITFIIDNVVFQSNLIDGRFPNVQIAFPKEFETIISLKQRVISRLLSRFDFPTDDGMPSIVNIKVDNDKIYFKTSISEVGKYEEEFEDFSIEGNKNISISFNTRFLIEAIKTLDEDIIELKLINSTKPIILNNMSDEDLKQVILPTFLSN
>NZ_CP007520.1|WP_042733033.1|15503_16787_+|ATP-binding-protein
MYIKRDFYLNKLIEKQNNKKVKIITGIRRCGKSYLLFNIFYNYLISIGIEKDQIKILSLDKYSNRNYRVPSMLNKFFEDSIKDPNKKYYFFIDEIQLCNNEFNEITNSYDTFIDVLLEYYQNDNIEIYITGSNSRMLSKDILTQFRDRGDEIRVHPLSFNEIYELFKNKQKALQQYFMYGGMPYIYYLDDEKQKINYLQTLFTETYLKDIIERNNIINNHEVLDILLNFISSTVGSLTNPTKLSNRFDSENKIKISSETVKKYLDYFKDAYIISSCQRFDVKGSKHFKTPLKYYFTDIGLRNARLNFRQIEHSHIMENIIYNELIKRDYAVDVGVVRYDHKTPTKRTEIELEIDFVVNKGHEKYYIQSALNVDSYEKLKQETNSLKRVDDSFKKIVIVRENIVSRNDDNGILFIGLEEFLLDENILN
>NZ_CP007520.1|WP_174407385.1|16938_18114_+|DNA-(cytosine-5-)-methyltransferase
MFAGIGSQYKACKNIEKELDVRFESLGACEWFIDAVIGYMKIHYGQIESENSLSKQEMTLLLSNYSWSADSKKPVRENYFLTMKEEKLRKIFPYLFGFVNKEYLSKKINNDFHGGGGQSYTNIKKIEILPKNIDILTYSFPCQDISQQGSQKGITKQTRSGLLFEVERILKNNKDRLPKVLLLENVKALASYKFNKDFTNWLNTLKELGYESKWKVINSVDYGSVQNRERVFCVSYLSKNKEFDFPKRIENKRTLKAIIKNEIDMQECNKLLKYFKDDFYVTKNNISKTKLVGYTNFNSEAYIYLPDKLGPTLTASGANSRLKFYFKETNELKFISAKQAFLYMGFDKKDYQAIKKDDLLNESKMIFLCGNSISVEVLEHLFKEMILCEIV
>NZ_CP007520.1|WP_042733034.1|18098_19286_+|HNH-endonuclease
MWNSIDIRVFRMHFETRSFNNEKSTSAKAKGYIDLYLDFSTKILYVPHWEIKFESLYLDLYTTPAWFKSRKKNFNLRKSLFDKLGLDQAKRPDKTENWLYELDQNELEIASKWFNEEYNSTLKNIISIIKGNNAGGSFKKPSAAEIIGVNLDDKHEEYKYNLTMFFDLITYKDERILDLLENDENNMLIDQLESINDFLDYIVNSNKYPIHSKLLKLTTVKPNLSYEERKEFFDSKSAKIMEEIIRDSNKKLLEIDTKIKRARSKASKMKINVFKREKGYSYENAHILDVAIIRNKLIELIDGNKQLDDSEFVNLFDYITDENNMLNLQTQVHKWFDKGFFSFNKNGEITKTKNDFDINDYSELGFYRMIPKDKLTDERINYINLRNENRGLKID
>NZ_CP007520.1|WP_042733035.1|19291_20089_-|TatD-family-hydrolase
MDNNKIFDNHIHFNDDFRYKDANIKQMIEESYKHNVGGWLCASFDLTSSKKAVELSEEFDDVYAAVAIHPNEVSNYDKSVIKKLDQLASHQKVVAIGETGLDYYYTREDEQLQKEFFKAHIDLAIKHNKVLQMHIRDLKDVYEAYDDVIEIIKDLNRIPKVVHCFSANKEYALKFLELGCYINIGGAVTFKNAKDLQEVVKVIPLDKLLLETDAPYLTPHPFRGQLNHPKYIYYTAEKVAELKNVTVEEVIKQTTLNSKKLFKID
>NZ_CP007520.1|WP_004428548.1|20173_20773_+|FMN-dependent-NADH-azoreductase
MSKVLVLKTTAQADEVSNSVALTKRFLEEYKKLNPNDEIIEIDLNKEEVGTSILTQQSFPTFFQQPATIDYIKLLKSVDKLVIACPMYNFSTPVTLKTFIDHVSLANETFSYKYSKKGDAIGLITNLKAQILGVQGAPLGWYTWGAHTQYVEGALGFLGIKFNKTVLLAGVKVGELAQLSPEQRVETIIDDIKEAARTF
>NZ_CP007520.1|WP_042733595.1|20831_21872_-|alcohol-dehydrogenase-AdhP
MKAFVVSEPHKWSVEMVDIPEPKEKEVLIKMETSGICHTDLHAANYDWLVEPKYPLIPGHEGIGIVTKLGPGCTHLKVGDRVCLAWLHDACGHCEYCLSGRETLCPDQNMSAYTKDGSYAEYAIGHEDFVGLVPKDLDIITGAPVVCAGVTTYKAVKQAKLKPGNFVVVIGVGGLGQMAIQYGKAMGYRAIGIDVTDEKVDLALKSGAEFAFNSKKVNAIEKVIEVTNGGAHGVVNTSVATSAANQGMEMLRRGGRQVLVGLPAKDKLGKDEFGVSVFWTVLLERELAGSIVGTRKDLQEALDYAARGLVKSEVTKVVKLDQVAEIFEKLEKGDFIGRAVIDFRQN
>NZ_CP007520.1|WP_042733036.1|22074_22617_-|lipoprotein
MKKLLTILGIFTMTAIAGGVAISCTKNEMKTKPEMKEKEENMKEELPKELKISGVGITSIGESQFEKEFDEIKKEIGPKVEKFINSLKEDQENGKLDALKTKEAETFFNSKEGESLSKLLEFYEDSKSFSSLNDAISKITEKEQNKLQTKINFLKHMKEIFEDYKKHENKITSWIQKFNS
>NZ_CP007520.1|WP_042733037.1|22810_23290_-|hypothetical-protein
MKKIVSILSIFTTLATTGAVAISCTRSEIKEKPIEKKINPKEEETEKIDETQLETQFQNIKKIVGPKIDLLIKKLRELEKEDAEVLATQEVGALVDIFQFYEDSKSYDSLKEAVEKLPKDNEDKERSKKDFLESVKSTFDNYEKYKSKIDELIDKYVGS
>NZ_CP007520.1|WP_144402417.1|23364_24726_-|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-GTPase-MnmE
MTLQDTVVAPATNISAQAIALIRISGDEAFTVINRLLKEKDQIQTKRGIFVRKLYFKDELIDEVVLTCFVAPNSFTGENVVEIACHGGILNTNRIINIITQSGARMAMRGEFSQRSFVNGKIDLIQAEGINNLIHAKNELALKIGVANMSGANNKAVIELKDNLLDIISRIQVSIDYPDYDDVEGSSVEDLTKLLEIINDQINKLLIRSKMAFKNSEGIKTAIIGQTNVGKSSILNTLINEDKAIVTDIPGTTRDIVEGQISLENVTLDLIDTAGIRATDDIVENLGIQKSKDLINKADLVLFVVNYNNIDDKDNKEIFELLNDKNWILVVNKTDQLDDKQVESLNLKYNNVVFTSAKNQDIDQLILKINQMYNNEEIKKNDELILIGLNQITLVEQIKTKLTTALDVIKSGMPIDIVNVDLYDAWNLLNELIGVEYEDEIIDNIFRKYCLGK
>NZ_CP007520.1|WP_042733039.1|24894_26445_-|thiamine-biosynthesis-protein-ThiF
MNNKIKEWSQKNKVLYGFILWSFISFAYMLFIANWGFSVTLAGDGVKDGMANAGFLGYFRIQKDANFQLISQIANWSITLGRGIGSVLVALLLAKFAHKYTTIIAIAMTLVGIPAAFMPATGYGYALFLVLRTIMAIGGTTLIILTQPVVANFFGPKQKSVVSQFGIWFYPLGTIISIVPVLVVTNSDAVREQWKLIVTLLAALNIIPLLLFIFIGTQFDVKENEPRVKVNGWSILGSYVKKKQTYAWVLLYGGWLCIAVFLTSLTVPIFNGLSKAEGIFNKYIFGWQVAFLSAVFVGPISLGLWSRKQAKRRWFIATAIASAIVLFTLSTLTFIFGVAKYGSGDNKSMFGFSAAMFIILGFLTGLCIWGIQGVMLNLPHEYKESDPKTIGWMFSLIWGFGYVFFTLVLILISGISLIPALQKNQLTLTAIQFVLIILSTAIAFIGILMLKEPHPEYPMFPCKKVEQAKVEPVKVEEVKVEEPVVKEVKPKTAAKSTKPKSTTAKSTKPKTASKSK

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Crispr_ID: NZ_CP007520_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP007520_2

180463-180561

Orphan

Consensus_repeat	Method
TTACATTAGATACATCCCAATTAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP007520_2

>merge|NZ_CP007520|2|180463-180561|CRISPRCasFinder
TTACATTAGATACATCCCAATTATCTAAATCTTGGTTAAAACTTTTAGCACCATCAAACATAAAACTCATATCTATTACATTAGATACATCTCAATTAT

>NZ_CP007520|2|2|180463-180561|CRISPRCasFinder
TTACATTAGATACATCCCAATTAT	CTAAATCTTGGTTAAAACTTTTAGCACCATCAAACATAAAACTCATATCTA
TTACATTAGATACATCTCAATTAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007520.1\|WP_042733144.1\|194684_195353_+\|tRNA-(guanosine(46)-N7)-methyltransferase-TrmB	unknown	unknown	gnl\|CDD\|234649
NZ_CP007520.1\|WP_042733135.1\|176651_177227_-\|YigZ-family-protein	unknown	unknown	gnl\|CDD\|376491
NZ_CP007520.1\|WP_042733133.1\|166093_167227_+\|phosphatase-PAP2-family-protein	unknown	unknown	gnl\|CDD\|366709
NZ_CP007520.1\|WP_144402408.1\|187556_190391_+\|excinuclease-ABC-subunit-UvrA	unknown	unknown	gnl\|CDD\|234734
NZ_CP007520.1\|WP_052491382.1\|181723_183826_-\|DUF285-domain-containing-protein	unknown	unknown	gnl\|CDD\|308794
NZ_CP007520.1\|WP_042733137.1\|183983_184772_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007520.1\|WP_042733136.1\|177306_180141_+\|preprotein-translocase-subunit-SecA	unknown	unknown	gnl\|CDD\|237258
NZ_CP007520.1\|WP_042733139.1\|185548_187549_+\|excinuclease-ABC-subunit-UvrB	unknown	unknown	gnl\|CDD\|235395
NZ_CP007520.1\|WP_042733134.1\|175188_176490_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|224292
NZ_CP007520.1\|WP_174407388.1\|174417_174903_+\|DUF285-domain-containing-protein	unknown	unknown	gnl\|CDD\|308794
NZ_CP007520.1\|WP_042733141.1\|190390_191503_+\|dihydrofolate-synthase	unknown	unknown	gnl\|CDD\|273659
NZ_CP007520.1\|WP_144402419.1\|169191_170109_-\|BspA-family-leucine-rich-repeat-surface-protein	unknown	unknown	gnl\|CDD\|308794
NZ_CP007520.1\|WP_042733132.1\|164956_165961_-\|5'-3'-exonuclease	unknown	unknown	gnl\|CDD\|214682
NZ_CP007520.1\|WP_042733138.1\|184755_185541_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007520.1\|WP_052491379.1\|167371_168937_-\|DUF285-domain-containing-protein	unknown	unknown	gnl\|CDD\|308794
NZ_CP007520.1\|WP_042733142.1\|191529_193113_-\|DUF285-domain-containing-protein	unknown	unknown	gnl\|CDD\|308794
NZ_CP007520.1\|WP_042733130.1\|163192_164623_+\|F0F1-ATP-synthase-subunit-beta	unknown	unknown	gnl\|CDD\|236447
NZ_CP007520.1\|WP_042733143.1\|193272_194667_+\|magnesium-transporter	unknown	unknown	gnl\|CDD\|225148
NZ_CP007520.1\|WP_042733145.1\|195404_196370_+\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|378820
NZ_CP007520.1\|WP_042733131.1\|164640_164940_+\|F0F1-ATP-synthase-subunit-epsilon	unknown	unknown	gnl\|CDD\|213395

Protein	Function_ID	Function_description	E-value
NZ_CP007520.1\|WP_042733144.1\|194684_195353_+\|tRNA-(guanosine(46)-N7)-methyltransferase-TrmB	gnl\|CDD\|234649	PRK00121, trmB, tRNA (guanine-N(7)-)-methyltransferase; Reviewed.	5.69577e-69
NZ_CP007520.1\|WP_042733135.1\|176651_177227_-\|YigZ-family-protein	gnl\|CDD\|376491	pfam01205, UPF0029, Uncharacterized protein family UPF0029.	4.54029e-49
NZ_CP007520.1\|WP_042733133.1\|166093_167227_+\|phosphatase-PAP2-family-protein	gnl\|CDD\|366709	pfam01569, PAP2, PAP2 superfamily. This family includes the enzyme type 2 phosphatidic acid phosphatase (PAP2), Glucose-6-phosphatase EC:3.1.3.9, Phosphatidylglycerophosphatase B EC:3.1.3.27 and bacterial acid phosphatase EC:3.1.3.2. The family also includes a variety of haloperoxidases that function by oxidising halides in the presence of hydrogen peroxide to form the corresponding hypohalous acids.	2.4355e-05
NZ_CP007520.1\|WP_144402408.1\|187556_190391_+\|excinuclease-ABC-subunit-UvrA	gnl\|CDD\|234734	PRK00349, uvrA, excinuclease ABC subunit UvrA.	0
NZ_CP007520.1\|WP_052491382.1\|181723_183826_-\|DUF285-domain-containing-protein	gnl\|CDD\|308794	pfam03382, DUF285, Mycoplasma protein of unknown function, DUF285. This region appears distantly related to leucine rich repeats.	2.42055e-56
NZ_CP007520.1\|WP_042733136.1\|177306_180141_+\|preprotein-translocase-subunit-SecA	gnl\|CDD\|237258	PRK12903, secA, preprotein translocase subunit SecA; Reviewed.	0
NZ_CP007520.1\|WP_042733139.1\|185548_187549_+\|excinuclease-ABC-subunit-UvrB	gnl\|CDD\|235395	PRK05298, PRK05298, excinuclease ABC subunit UvrB.	0
NZ_CP007520.1\|WP_042733134.1\|175188_176490_+\|ATP-binding-protein	gnl\|CDD\|224292	COG1373, COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only].	6.07368e-55
NZ_CP007520.1\|WP_174407388.1\|174417_174903_+\|DUF285-domain-containing-protein	gnl\|CDD\|308794	pfam03382, DUF285, Mycoplasma protein of unknown function, DUF285. This region appears distantly related to leucine rich repeats.	2.54767e-43
NZ_CP007520.1\|WP_042733141.1\|190390_191503_+\|dihydrofolate-synthase	gnl\|CDD\|273659	TIGR01499, Folylpolyglutamate_synthase, folylpolyglutamate synthase/dihydrofolate synthase. This model represents the FolC family of folate pathway proteins. Most examples are bifunctional, active as both folylpolyglutamate synthetase (EC 6.3.2.17) and dihydrofolate synthetase (EC 6.3.2.12). The two activities are similar - ATP + glutamate + dihydropteroate or tetrahydrofolyl-[Glu](n) = ADP + orthophosphate + dihydrofolate or tetrahydrofolyl-[Glu](n+1). A mutation study of the FolC gene of E. coli suggests that both activities belong to the same active site. Because some examples are monofunctional (and these cannot be separated phylogenetically), the model is treated as subfamily, not equivalog. [Biosynthesis of cofactors, prosthetic groups, and carriers, Folic acid].	4.45314e-70
NZ_CP007520.1\|WP_144402419.1\|169191_170109_-\|BspA-family-leucine-rich-repeat-surface-protein	gnl\|CDD\|308794	pfam03382, DUF285, Mycoplasma protein of unknown function, DUF285. This region appears distantly related to leucine rich repeats.	3.57113e-45
NZ_CP007520.1\|WP_042733132.1\|164956_165961_-\|5'-3'-exonuclease	gnl\|CDD\|214682	smart00475, 53EXOc, 5'-3' exonuclease.	4.31213e-75
NZ_CP007520.1\|WP_052491379.1\|167371_168937_-\|DUF285-domain-containing-protein	gnl\|CDD\|308794	pfam03382, DUF285, Mycoplasma protein of unknown function, DUF285. This region appears distantly related to leucine rich repeats.	1.82747e-56
NZ_CP007520.1\|WP_042733142.1\|191529_193113_-\|DUF285-domain-containing-protein	gnl\|CDD\|308794	pfam03382, DUF285, Mycoplasma protein of unknown function, DUF285. This region appears distantly related to leucine rich repeats.	5.14267e-36
NZ_CP007520.1\|WP_042733130.1\|163192_164623_+\|F0F1-ATP-synthase-subunit-beta	gnl\|CDD\|236447	PRK09280, PRK09280, F0F1 ATP synthase subunit beta; Validated.	0
NZ_CP007520.1\|WP_042733143.1\|193272_194667_+\|magnesium-transporter	gnl\|CDD\|225148	COG2239, MgtE, Mg/Co/Ni transporter MgtE (contains CBS domain) [Inorganic ion transport and metabolism].	8.34982e-90
NZ_CP007520.1\|WP_042733145.1\|195404_196370_+\|alpha/beta-fold-hydrolase	gnl\|CDD\|378820	pfam12146, Hydrolase_4, Serine aminopeptidase, S33. This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. It is found in association with pfam00561. The majority of the members in this family carry the exopeptidase active-site residues of Ser-122, Asp-239 and His-269 as in UniProtKB:Q7ZWC2.	2.44568e-13
NZ_CP007520.1\|WP_042733131.1\|164640_164940_+\|F0F1-ATP-synthase-subunit-epsilon	gnl\|CDD\|213395	cd12152, F1-ATPase_delta, mitochondrial ATP synthase delta subunit. The F-ATPase is found in bacterial plasma membranes, mitochondrial inner membranes and in chloroplast thylakoid membranes. It has also been found in the archaea Methanosarcina barkeri. It uses a proton gradient to drive ATP synthesis and hydrolyzes ATP to build the proton gradient. The extrinisic membrane domain, F1, is composed of alpha, beta, gamma, delta, and epsilon subunits with a stoichiometry of 3:3:1:1:1. Alpha and beta subunit form the globular catalytic moiety, a hexameric ring of alternating subunits. Gamma, delta and epsilon subunits form a stalk, connecting F1 to F0, the integral membrane proton translocating domain. In bacteria, which is lacking a eukaryotic epsilon subunit homolog, this subunit is called the epsilon subunit.	9.1922e-21

>NZ_CP007520.1|WP_042733136.1|177306_180141_+|preprotein-translocase-subunit-SecA
MISDKRLIKRYGQIADKIIKLEPEMRELKDEDFKVKTQEFKDLIANGTEPDSLLIEAYALAREAARRVLGLNAYRVQLIGGIILNSGDIAEMRTGEGKTLTGIFPAYLNALTGKGVHVVTVNEYLSKRDSEINGQVYDFLGITVGLNGSRLSKSEKREAYEKDITYTTNSELGFDYLRDNMVSDPSQRVQRKLNYCIIDEADSVLIDEARTPLIISGGSSSRKNMYKTANDFALTLKEHDDVDIDLESKQVYLNEQGMRKANEFFSLKNLFALENTEIFHLIMNALKAQFVFKEGIEYTVRDGEILLIDQFTGRIMEGRSYSDGLQQALQAKENVEIEEETVTLATITYQNFYRLYSKIAGMTGTAKTEEEEFIKIYNTRVVVTPTNKPVIRKDEPDLTFGSKNAALKKLVKDVKETHELGAPILIGTTSVESSEQIARYLTKAGLKFETINAKNHDREAEIVAKAGQLGAITLATNMAGRGTDIKLSDEVKKLGGLRVFGVERNEARRIDNQLRGRSGRQGDPGLSRFYISMDDDLMIRFTVPKQRQRFKSLGDDYIKSRLFTRAITNNQKKLEGMNFDQRKNVLDYDNILAQQREIIYAQREDILEATDLTVAIKKFQITTAYELIEKHSTEVHGEKTLNSESLLKVIDGNLVPKNKFTVQDFYNKEKMDLAIEIAEAMMKLYKARISDIPEDVALNMERRVILDSFDKYWTKHLDLANKLKSGIYLQQYAQNNPLAIYVEQATSLFNKMKVNIADEIVNNLSNVILKLVEEEPREERIEITDKDIEDILNETGLSKDDINNSAINRRFDELEKEFKEDKPKLRRLRIQRDIMLGLVIELERREQMISESSAENQEITRLIKKIQKERDITTITIEEVQADFEKIAKKCKDADELHKLSIARDILLELVQRMDDFKKQARFESKKKAEDATEEDQKVKVRIG
>NZ_CP007520.1|WP_042733135.1|176651_177227_-|YigZ-family-protein
MKTIDSKVYTNQIIIKNSKFITIMKKVNSKQDLESFLDKYRQLDATHNCYAYRIYDDKVIGGYNDDGEPSSTAGKPIFNVLEKNNLFNVVILVIRYYGGIKLGAGPLTRAYSNCASEIVKLADIIETKKYYVYKIQFNITEIKQVNNWMNKNKIEILTKEFDEKVVYLIQSEVEIDTSNLFEILEKSVLNK
>NZ_CP007520.1|WP_042733134.1|175188_176490_+|ATP-binding-protein
MSIRRDFYLNKLINKMNNGKVKVITGIRRCGKSFLLFNIFNDYLISKGVKEEQIIKLSLDSVKNISLRDPLKLIEHIEHFIVSNDEKYYVFIDEIQYCEIIDNPYVKNSKHKITFVDVLIELMKRDNVDVYVTGSNSVMLSSEILTQFRDRANRIHVLPLSFSEILPLFDDQKKALQHYFYYGGLPGVYILDTEDEKVEYLANLFNELYIKDILERKSIQKDKYVLEILLNFISSSIGSLTNPSKLSKRFDSETKIQISPTTVSNYLDYFEQSFLISSCHKFNVKGGKVFKTPLKYYFEDPGLRNARLDFNQYEENHIMENIIYNELKRRGFIINTGVVETFSTVDNKTSRKTLEVDFVAKKANKKYYIQSAYQMPTQEKKEQEARSLYNIDDSFKKIIITFDNSIPKYDQKGVLYIGLIDFLLDGSFIDSEV
>NZ_CP007520.1|WP_174407388.1|174417_174903_+|DUF285-domain-containing-protein
MNGMFWAAKKFNKSLRNWNTSNVTDMGGMFAFTDNFNQDISNWDTSNVTNMNRIFFGAENFNQDISTKNVTKSDGSVYKAWNTSNVTNMSEMFSKTKNFNQDISNWDTSNVTDMSWMFAESKSFNQNLSGWNVSKVEKNENFNKDAHLEFKDNKLPIFPKK
>NZ_CP007520.1|WP_144402419.1|169191_170109_-|BspA-family-leucine-rich-repeat-surface-protein
MSGMFRSSGFNQNIGNWNTSKVVKMNCMFTNNKVFNKDISSWDTSKVTNMSEMFYGAEKFNQDITKWNTNSLKNTESMFKEAKIFNQDINTKEVERKDGSKYTAWDVSNVINMSEMFSRAEAFDKPLNNWNVSNVKNMSKMFNVSNFNQDIGNWNTENVTDMQSMFAGAEKFNQYIGNWNTSNVKNMHNMFYKAKTFNQDINTKEVERKDGSKYTAWDVSKVKSMSDMFWSAESFNKDISSWDTSKVTTMNNMFWFAKSFEQNISTWDVDNVEFYNRFINKESKLKLEFIPEKFRAKIKEELNKK
>NZ_CP007520.1|WP_052491379.1|167371_168937_-|DUF285-domain-containing-protein
MKKLLLLILTTTTALASIGTGVGITIVKNKKLHISKIITKKEIGLIRVKDITIENIKEKVVQLNPEIKEFSSNFTLELISDYRAKLKAKDENPKFTGEVEIKFIRIDNDASLDNDRRSVDVHNLRGRSSDGVLSYYRVFGNRWKIERFDKKVNSVPEELPWFITDLNSVFEHNENEEIKGLDKWDTSNVTEMDGVFSFAKKFNGDVTNWNTSNVTNMRRMFQGAESFNQDISKWDTSKAINMEFMFDGAKSFNQDISSWDTSNVINLGHMFAVAESFNQDIGNWNTSNVVNMISIFRGAKNFNQDISSWDTSNVTDMRGVFINAESFNQDISKWDTKNVTKMAHMFYKARSFNQDISNWDTSKVTDMQSMFEEATQFNQPLNNWNTSSVTNMSRMFTRASNFNQDISNWDTSNVTDMRGVFINAESFNQDISKWDTKNVTKMAHMFYKARSFNQDISNWDTSKVTDMQSMFEEATQFNQPLNNWNTSSVTNMSRMFTRASNFNQDISNWDTSNVTDMQSMF
>NZ_CP007520.1|WP_042733133.1|166093_167227_+|phosphatase-PAP2-family-protein
MNIKFKKKSSVFYTIFFSLLILFILAVIGLVISTPYKTDLKISKFCEKALNYEIGKYWAVIYEMLGNMLLTPFICFACMVFVESWFLHKSQNNQLNFWSKNKWIIKVIYLAILISSLSVLSTGSYFQLKKGNGFGVDGDAVFLMSMHYRKVALIFSIIVTHLIMIVGFCLLHFKFARSQNFLSNQYWIESIKVILFAIVTYIIIVLLKGMTSRVYYYNVIYADLLEKMKQEGHQDWVNIYLNQTEFKHGLVDGNKVINIDGDWPWYVINGTMFHPRQDLNFYHKWVEWAFPSGHIIGTLTMSTTFFFFLSNKKKLSYVNIIFLVISLLHLLSMSCALVVDRGHWFSDVCFSYLFGLPLIWVVHKIGEKIKQRTNNKK
>NZ_CP007520.1|WP_042733132.1|164956_165961_-|5'-3'-exonuclease
MITKNETKPILLIDGYHLLHKGYYGTLKRKKISTNKDGIIINAVYTFAANIFKFINSNNYHCIIVTFDIDKESFRKQLYPNYKAKRKETPADLIPQMKLVREFLTAANIPWYEKEPYEGDDVMGTISRIANKLGYEVRILSNDKDTFQLVNDKTYIITNISKKDATHIITEKEVYEHFSCSPKQVADIKALLGDSSDNIKGVKYMRHKQAYMLLEKYKNVETIIENIDKLPKPLKKTISENKDLLILNKQITTILTNLKLGKINFKPTRVTYYKLIRFLKSQQMYSFIKPIRNKIEEFNKNRSNNSQNNKKITSKKNYKKVVTNKVSKTKSQSK
>NZ_CP007520.1|WP_042733131.1|164640_164940_+|F0F1-ATP-synthase-subunit-epsilon
MAIKLKIITPNGIFINGKEVDIINVKTIDGDMGILANMAPFVTALKISDLNFKINNQLTYVHVSGGLMTVSQTECKIITENLYLVDENGSRLETPIKID
>NZ_CP007520.1|WP_042733130.1|163192_164623_+|F0F1-ATP-synthase-subunit-beta
MKSNKKPSQESTEFVSTGKIVQVMGPVVDVKFSENNIPMIYDALVVDNNGVKLVLEVEQSIGDEIVRTIAMGPTDGLTRGLEVKNTGKPIQAPVGDVVLGRMFNVLGDPIDEKPDVEGERLPIHRDAPSYDELVTTTEILETGIKVIDLMIPFSKGGKVGLFGGAGVGKTVLIQELINNIAKAHNGVSVFAGVGERTREGNDLYYEFIEAGVLDKTSLVFGQMNEPPGARMRVALTGLTMAEYFRDKKNMDVLLFIDNIFRFTQAGAEVSALLGRMPSAVGYQPTLSTEMGALQERITSTKNGSITSVQAVYVPADDLTDPAPATTFTHLDARIVLDRSIASLGIYPAVDPLASSSRMLDPEIVGLDHYQTALGVQETLQKYRDLQSIIAILGMDELSEEDKLVVQRARKIRNFLSQSFFVGEKFTGRAGVFVKVADTVRSFKSILDGEVDNIPESYFLYASTIDDVIMKFKNDKK
>NZ_CP007520.1|WP_052491382.1|181723_183826_-|DUF285-domain-containing-protein
MKLTWKTISLIIGTNAISATSVGTGITLLNNKSQKIESIDLSTLNIDKDLGWINESDKTVEKLILLIKQKNPKTNFNFSKLDLVIKDNTVIVKPIKNDKTYKNQITFTFYIPTSEEIIINKIKSIWDLEFKDRFRGKNKWDLPSKKTILKTLSDRLIKNKLNNIKIHYLEDSLKESKPKENETLKFIYKDNIIELNIGIFNNQKRKHTYKDITKREVIKIGYFINSNGLFQIQKFNKVTKKVPDNLPSAIEDLSKAFYDNKNAFIIGIQNWDTSNVTNMSEMFYGAEKFNQDISMWNTSNVTNMSSMFRDAYSFNQNINTKITVKEDQTSYKAWDTSKVTNMSEMFCGAEKFNQDISDWDTSKVTDMSYMFRGAYSFIKNINSWVTSNVTNMSGMFYRAENFNQDVSKKKIRIDNWTYYYAWDTSKVTNMSEMFYGAEKFNQDISNWNTSNVTNMRGMFEGAREFNQDVSKKKIRRCGPEIYYAWDTSKVTDMSYMFRGAEKFDQDISDWNTSNVTNMRGMFEDAREFNRNLKNWDTFKVTDMSRMFYGAKNFNGDISNWDTSNVTNMSWMFRDAENFNQDISKKEEWNYRRKYHYVWDTSKVTDMSEMFKNCLNFNQPLNNWDVSNVTNMKEMFYDAKKFNKPLSDWNTSNVTNMESMFEGAIDFNQNISNWEVNQVRRYSDFNKNSNLEEKNIPPFKR
>NZ_CP007520.1|WP_042733137.1|183983_184772_+|hypothetical-protein
MNNLKVTNLLFIIFYIFYIIRLCKEKKHEQTTLTRTLKTDLIFYSFIIFISFFINISFAITNISQKVANIDSLIFLDSISISMWSMWITTSYAIYALYKNIKTKQVYSNKWVEFLAVSMLLASMILFIFYLSVGFVNEIINWSYWLKIINSYFLLPIAFLSYLLLFKNKTLVDNKVMFRSTWRLVLISFVYIIYVVIKTFARLQLVKNNQFAFVDIDIEKLGVTNFIFLGIFIFAVYFSSYFAVIKINNLVNKNGGIYEKSW
>NZ_CP007520.1|WP_042733138.1|184755_185541_+|hypothetical-protein
MKKVDNKNWLKTFKRTFKSEMIVSVVMLFLIASCLFMFFVLKSFGITTNKPEAADFIFTRDTTYLSEWYATFVMVFSAMKITKMLQTKKILIFKYTEYTFTAWTIFIFLFYVVGIIIGQTQIDDTSFDTYYRASAIHVIVPLIWLVYFFIFPICDQKTKKQVWLGSLQNVVILSAYLIWIGIRLIPNVADQNVAYPYAFLSAEKIGVALYVLGNILFIALISLLYVGVYYLNILIYNKSNKLTNKNNIKNESIIKINKESN
>NZ_CP007520.1|WP_042733139.1|185548_187549_+|excinuclease-ABC-subunit-UvrB
MNYINNNKFKLVSRFSPSGDQSQAIEQLNQGLKDNKKYQVLLGATGTGKTFTIANVIAKHNKQTLVLAHNKTLAMQLYYELKELFPENRVEYFVSNFDFFQPEAYVPSKDLYIDKDARQNMELDMMRLSACNALLTRNDTIVVASVAAIFALQNPDEYSSAFFELKLGQKIARNELLNWLVKTGYTRNDIENELGSFSAKGDVIKIVPGWANNIMFRISLFNDEIEMIDILNSITGAVIDRTSTVSIFPAQAYVTPQDKIKLICNNIRNELTNRLAVLTSENKLLEAQRLEQRTKYDLESLEEFGYCSGIENYSSHLDLRQPGQRPYILLDYFKDDFLTIIDESHISLPQIRGMYNTDRSRKTTLVEYGFRLPSALDNRPLNFDEFNSLLHQVIYTSATPGDYELDQVNNHVVQQIIRPTGLLDPIVEIRPTTNQIDDIINEIHNRRKVNERVFITTLTIRMSEDLTNYLQQRDIKVAYLHSELKTLERSEILNDLRKGVYDVVVGVNLLREGLDLPEVSLICILDADKQGFLRNYRSLIQTIGRVARNEHGKAIMYADSTSQAMQQAIDETNRRREIQQQYNKIHNITPKTVSKQITESVLSKKSKQAIEKAKKIRNSKQKIETLQKAIDDLREEMLQAAKELDFERAAVLRDTIIELENQKSSN
>NZ_CP007520.1|WP_144402408.1|187556_190391_+|excinuclease-ABC-subunit-UvrA
MMNDKIIIKGAREHNLKNVDLEIPKNKLVVFTGLSGSGKSSLAFSTIYAEGRRRYIESLSAYARQFLGGNEKPDVDSIEGLSPSISIDQKTTSHNPRSTVGTVTEIYDYLRLLYARIGTPYCINGHGQIQAMSISEIVNNIKQTTTENQQIHILSPLVRDKKGTFKDVLEKLSSDGFIRVIVDGELKMLDDEIQLDKNQRHNIDIVVDRIIYKNTDEINSRVFAAVETGLNYSNNLIKIAYINDDQKVEKLFSTSFACKECDFVVPELEPRLFSFNAPLGACSECNGLGVNLEPDVNLIMPNMNLSINEGGVSYYKNFLHTDNLEWQKFRTLCDYYYIDLSLPLNQLTKKQIDVILWGSDREIDIRLVSSNGKKYESFDYIEGTAQLIKRRYFETKSEEIRNWYSKFMSSTTCTLCQGSRLNEIALSVKINDKSIFDYTKISISEELDFLLNIELTETQKTIAKLVLDEIISRTSFLNEVGLGYLDLARTATTLSGGESQRIRLAKQIGSQLTGILYVLDEPSIGLHQKDNDRLIATLKHLRDLGNTLIVVEHDEDTMKASDWIVDIGPGAGENGGEITFSGTYNEILKTDTITGKYLSKRMTIPVPTKRRSGNKKVIQIIKASENNLKNIDVTIPLNKFVTITGVSGSGKSTLLEDIVYKGLQNNLSKEYIPTGKVKEIRGVENINKVIYISQEPIGKTPRSNPATYTSVFNDIRDLFTNLPEAKIRGYKKGRFSFNVPGGRCEHCQGDGVITISMQFMPSVEVVCEVCEGKRYNSETLMVKYKDKSISDVLNMTVSQAYEFFENIPQIKAKLQTILDVGLGYIKLGQNATTLSGGESQRIKLSTHLLKKQTGNTMFLLDEPTTGLHIDDVKRLIDVLNKLVDLGNTVLCIEHNLDFIKVSDHIIDLGPDGGQYGGQVVAFGTPEQVVQSEKSYTAKYLKGYL
>NZ_CP007520.1|WP_042733141.1|190390_191503_+|dihydrofolate-synthase
MISVDEFLFEWLTRDKKISVFKEVLKELNNIESKLPTINVVGTNGKGSTSFYISQGLKQKYKKVGLFISPAFMFHNERIQINNIPISDDDLKKYIKKAEVYMYKYQLNFFETSTLIMILYFVDNQVDIVVCEAGIGGYYDTTNYMSNQILTAFSSVSIDHTDYLGNSIEDIIFQKMNIAKPNTKLIVSDDNLKYKDIIFDKLINKNVEVIFANKIDDQIDYQKANKGLAKKVLEQFEIYDDSIFKLDKPLGRFSILQTDPYFIIDGAHNVDAINRLIIATKQLNKDFIVLYATSFLKDYKTSLELLESNFDEVYIASFDHIKAWDINNVNHKNKIYDWKTFLKNNNKNILICGSLYFIPQVYKWFMENKK
>NZ_CP007520.1|WP_042733142.1|191529_193113_-|DUF285-domain-containing-protein
MKWNKKLVSIISSIFITGSGVAVGVGFWHIRSNKTNKKSLDKLITITNLETIDNNKRENLIELIRQKNPNVNLDFDKLDLDIQTDKVIVKPKVGDKTYKGEVELSFKLSVELSSLITETNLGIIDESENTDQILLQLVKEKNPNLDINKVDIVRQENKVFIKAKSKDKTYKGIVEVFFALSIDLSNLIKDKNLGTIEKLQLTEEKIIELIRQKNPSVEIDFSKLHLVINEQEGKVTIKPKTGDKTYKRQVNLKFDLFTENDTKIIQQIKSIWNTEFKNRFRANRDNVLGRDKAHRFFFERLVKHKLSIKDIKFIGSTINDSNKIIFKFIYKNYTNIELDGGTINTKPLTEYHQYKGNEVTKIGYYISNIGFTIGQFKPTTNKVPSQLPDIINDLSNAFSGNKNKEIKGLENWDTSNVINMFGTFAFTDHFNQDISTREVMGGAYKYVAWNVSNVLNMRAMFRSAQEFNQNISNWDTSKVIDMREMFSVAWDFNQDISRWNVDKVVFYDDFNEFGQLKPEFLPEKFRK
>NZ_CP007520.1|WP_042733143.1|193272_194667_+|magnesium-transporter
MIDHTYLEQQIINLYNDKKTQEIINLAEETQPADFAEVLNHIQEKIAFEIFKKIKVSQSSLIFNYLSYDLREYILKNLNITKLKKLVNELYSDDIIDAIEDMETEIVRKVFDAASIEQRKELLNILKYDDYTAGSIMSVDFLSVRETKTVSKTINEIKKNHEEYDEIDDVFVVNKIGQLIGSIEVKDLILNDNNTKIGEFMNRKIISINSNQSQEEAAIMFKKYDINTLPVVDDNNILVGIITVDDVIDVLIEETNEDIHKYSGIKTTETNYFETSIWQMFRSRSLSLLIMLVLGFITNILMIVIFNKYNPTANSQLLLMLVPLTLIISGVVACSANQTLLITGRAISLQQLHKKEIKTIFFKEIIVSIMLAIILVVINFIRMMCVYLIEYKSDFSNIYIWKSIIIASVGIVITILISNLLALILPLIINKLGKDSSSVSLPLLTIVVDIITVVIFLGVGILFI
>NZ_CP007520.1|WP_042733144.1|194684_195353_+|tRNA-(guanosine(46)-N7)-methyltransferase-TrmB
MRLRNKPWTKDFLEIHKNNLIHFNKPNRLDLNKEFNNNNDVHLEIGCGKGQFITTLALKNSDINFIGMEKETTVVGVALKKSLKVFEQNNQQMNNLKYFNDFAEDLTEMFDDDSISKIYLNFSDPWPKKRHAKKRLTFITFLDRYSKILKKDGILEFKSDNDLLYEFSLEQLSQTNKWEIIYKTNDLYKDQEMIKDNIATEYETKFHSLGKNINKIVIKNLK
>NZ_CP007520.1|WP_042733145.1|195404_196370_+|alpha/beta-fold-hydrolase
MKNKVCSVNKNNFFKIAFYFIFIYIFQITKQNKYIKRFIHFCLTYKRFDDFTNTYNEHVKDLKDKNIKDFLIDKDQIKEFELSNDKGNISCLKIENKNSKKWVIGLHGWTENKYLALRLVQHFLNDGYNILTFDQFAHGRSYGKNTDVGFSTIEMLDTVIEFLKQNKATHIGLIGNSMGASTSVLYAQIGKYKKDINWIVADCGFSNLVRQFRWYMSTRLEKNWWQTSLFVGSKFNKHVNKDIKQYDLLKNMNQVTTPIFYIHSKGDTFINYLMSVEMYEKSNKDITEIWTPENSEHVRVIADYADQYHIKVKEFIKKHSL

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Crispr_ID: NZ_CP007520_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP007520_3

309141-309332

Orphan

Consensus_repeat	Method
AACTGAAACACTTCAAATGTAACAAATATGAGAGAAATGTT	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP007520_3

>merge|NZ_CP007520|3|309141-309332|PILER-CR
AAATGAAACACTTCAAATGTAACTAATATGATTTTAATGTTCGTTGGTGCTAAATCTTTCAATCAACCAGTAGGAAACTGAAACACTTCAAATGTAACAAATATGTGAGGTATGTTTGAACAAACAAAAATCTTCAACCAACCTCTAAACAACTGAAACACTTCAAATGTAACAAATATGAGAGAAATGTTC

>NZ_CP007520|3|1|309141-309332|PILER-CR
AAATGAAACACTTCAAATGTAACTAATATGATTTTAATGTTCGT	TGGTGCTAAATCTTTCAATCAACCAGTAGGAAACTGAAACACTT
CAAATGTAACAAATATGTGAGGTATGTTTGAACAAACAAAAATC	TTCAACCAACCTCTAAACAACTGAAACACTTCAA
ATGTAACAAATATGAGAGAAATGTTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007520.1\|WP_144402411.1\|311735_312338_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007520.1\|WP_042733221.1\|316295_317165_+\|tRNA-pseudouridine(55)-synthase-TruB	unknown	unknown	gnl\|CDD\|211339
NZ_CP007520.1\|WP_082028300.1\|309864_310878_+\|BspA-family-leucine-rich-repeat-surface-protein	unknown	unknown	gnl\|CDD\|308794
NZ_CP007520.1\|WP_042733217.1\|305620_305866_+\|30S-ribosomal-protein-S20	unknown	unknown	gnl\|CDD\|376586
NZ_CP007520.1\|WP_042733213.1\|301475_302039_-\|dephospho-CoA-kinase	unknown	unknown	gnl\|CDD\|238980
NZ_CP007520.1\|WP_042733212.1\|299797_301204_+\|exodeoxyribonuclease-VII-large-subunit	unknown	unknown	gnl\|CDD\|234714
NZ_CP007520.1\|WP_042733220.1\|314412_315708_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|224292
NZ_CP007520.1\|WP_004427569.1\|302032_302317_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007520.1\|WP_042733214.1\|302361_302946_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007520.1\|WP_042733211.1\|299394_299796_+\|transcription-antitermination-factor-NusB	unknown	unknown	gnl\|CDD\|273891
NZ_CP007520.1\|WP_042733223.1\|317739_318459_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|226674
NZ_CP007520.1\|WP_004427559.1\|315888_316242_+\|30S-ribosome-binding-factor-RbfA	unknown	unknown	gnl\|CDD\|376719
NZ_CP007520.1\|WP_042733222.1\|317164_317725_+\|riboflavin-kinase	unknown	unknown	gnl\|CDD\|185679
NZ_CP007520.1\|WP_042733224.1\|318820_319123_-\|lipoprotein	unknown	unknown	gnl\|CDD\|275340
NZ_CP007520.1\|WP_042733215.1\|303028_304474_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007520.1\|WP_042733216.1\|304475_305426_-\|DNA-polymerase-III-subunit-delta	unknown	unknown	gnl\|CDD\|235511
NZ_CP007520.1\|WP_052491393.1\|312359_314162_+\|DUF262-domain-containing-protein	unknown	unknown	gnl\|CDD\|377008
NZ_CP007520.1\|WP_042733225.1\|319351_320488_+\|N-acetylglucosamine-6-phosphate-deacetylase	unknown	unknown	gnl\|CDD\|238434
NZ_CP007520.1\|WP_042733218.1\|305917_307984_-\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|225212
NZ_CP007520.1\|WP_004427571.1\|301196_301412_+\|exodeoxyribonuclease-VII-small-subunit	unknown	unknown	gnl\|CDD\|273536

Protein	Function_ID	Function_description	E-value
NZ_CP007520.1\|WP_042733221.1\|316295_317165_+\|tRNA-pseudouridine(55)-synthase-TruB	gnl\|CDD\|211339	cd02573, PseudoU_synth_EcTruB, Pseudouridine synthase, Escherichia coli TruB like. This group consists of bacterial pseudouridine synthases similar to E. coli TruB and Mycobacterium tuberculosis TruB. Pseudouridine synthases catalyze the isomerization of specific uridines in an RNA molecule to pseudouridines (5-ribosyluracil, psi). E. coli TruB and M. tuberculosis TruB make psi55 in the T loop of tRNAs. Psi55 is nearly universally conserved. E. coli TruB is not inhibited by RNA containing 5-fluorouridine.	6.30259e-101
NZ_CP007520.1\|WP_082028300.1\|309864_310878_+\|BspA-family-leucine-rich-repeat-surface-protein	gnl\|CDD\|308794	pfam03382, DUF285, Mycoplasma protein of unknown function, DUF285. This region appears distantly related to leucine rich repeats.	1.00037e-54
NZ_CP007520.1\|WP_042733213.1\|301475_302039_-\|dephospho-CoA-kinase	gnl\|CDD\|238980	cd02022, DPCK, Dephospho-coenzyme A kinase (DPCK, EC 2.7.1.24) catalyzes the phosphorylation of dephosphocoenzyme A (dCoA) to yield CoA, which is the final step in CoA biosynthesis.	2.52726e-25
NZ_CP007520.1\|WP_042733212.1\|299797_301204_+\|exodeoxyribonuclease-VII-large-subunit	gnl\|CDD\|234714	PRK00286, xseA, exodeoxyribonuclease VII large subunit; Reviewed.	1.63043e-144
NZ_CP007520.1\|WP_042733220.1\|314412_315708_+\|ATP-binding-protein	gnl\|CDD\|224292	COG1373, COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only].	4.99976e-59
NZ_CP007520.1\|WP_042733217.1\|305620_305866_+\|30S-ribosomal-protein-S20	gnl\|CDD\|376586	pfam01649, Ribosomal_S20p, Ribosomal protein S20. Bacterial ribosomal protein S20 interacts with 16S rRNA.	6.93826e-17
NZ_CP007520.1\|WP_042733211.1\|299394_299796_+\|transcription-antitermination-factor-NusB	gnl\|CDD\|273891	TIGR01951, nusB, transcription antitermination factor NusB. A transcription antitermination complex active in many bacteria was designated N-utilization substance (Nus) in E. coli because of its interaction with phage lambda protein N. This model represents NusB. Other components are NusA and NusG. NusE is, in fact, ribosomal protein S10. [Transcription, Transcription factors].	2.20413e-31
NZ_CP007520.1\|WP_042733223.1\|317739_318459_+\|SDR-family-oxidoreductase	gnl\|CDD\|226674	COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only].	1.80255e-82
NZ_CP007520.1\|WP_004427559.1\|315888_316242_+\|30S-ribosome-binding-factor-RbfA	gnl\|CDD\|376719	pfam02033, RBFA, Ribosome-binding factor A.	4.31187e-31
NZ_CP007520.1\|WP_042733222.1\|317164_317725_+\|riboflavin-kinase	gnl\|CDD\|185679	cd02064, FAD_synthetase_N, FAD synthetase, N-terminal domain of the bifunctional enzyme. FAD synthetase_N. N-terminal domain of the bifunctional riboflavin biosynthesis protein riboflavin kinase/FAD synthetase. These enzymes have both ATP:riboflavin 5'-phosphotransferase and ATP:FMN-adenylyltransferase activities. The N-terminal domain is believed to play a role in the adenylylation reaction of FAD synthetases. The C-terminal domain is thought to have kinase activity. FAD synthetase is present among all kingdoms of life. However, the bifunctional enzyme is not found in mammals, which use separate enzymes for FMN and FAD formation.	1.43062e-36
NZ_CP007520.1\|WP_042733224.1\|318820_319123_-\|lipoprotein	gnl\|CDD\|275340	TIGR04547, putative_liporotein, MOLPALP family lipoprotein. Members of this family are surface lipoproteins, about 900 amino acids long on average, found only in the Mollicutes (Mycoplasma, Entomoplasma, Acholeplasma, Mesoplasma, Spiroplasma). Paralogs occur, such as MCAP_0360, MCAP_0361, and MCAP_0362 in Mycoplasma capricolum. This family shares significant N-terminal sequence similarity with STREFT (Secreted Thousand Residue Frequently Tandem), described by model TIGR04512; several members of the STREFT family have been misannotated as GnsA/GnsB family proteins. For proteins in this family, we suggest the name MOLPALP (Mollicutes Paralogous Lipoprotein) family lipoprotein [Cell envelope, Surface structures].	8.78243e-08
NZ_CP007520.1\|WP_042733216.1\|304475_305426_-\|DNA-polymerase-III-subunit-delta	gnl\|CDD\|235511	PRK05574, holA, DNA polymerase III subunit delta; Reviewed.	1.6665e-32
NZ_CP007520.1\|WP_052491393.1\|312359_314162_+\|DUF262-domain-containing-protein	gnl\|CDD\|377008	pfam03235, DUF262, Protein of unknown function DUF262.	1.16463e-23
NZ_CP007520.1\|WP_042733225.1\|319351_320488_+\|N-acetylglucosamine-6-phosphate-deacetylase	gnl\|CDD\|238434	cd00854, NagA, N-acetylglucosamine-6-phosphate deacetylase, NagA, catalyzes the hydrolysis of the N-acetyl group of N-acetyl-glucosamine-6-phosphate (GlcNAc-6-P) to glucosamine 6-phosphate and acetate. This is the first committed step in the biosynthetic pathway to amino-sugar-nucleotides, which is needed for cell wall peptidoglycan and teichoic acid biosynthesis. Deacetylation of N-acetylglucosamine is also important in lipopolysaccharide synthesis and cell wall recycling.	6.53894e-141
NZ_CP007520.1\|WP_042733218.1\|305917_307984_-\|MBL-fold-metallo-hydrolase	gnl\|CDD\|225212	COG2333, ComEC, Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only].	1.14262e-36
NZ_CP007520.1\|WP_004427571.1\|301196_301412_+\|exodeoxyribonuclease-VII-small-subunit	gnl\|CDD\|273536	TIGR01280, xseB, exodeoxyribonuclease VII, small subunit. This protein is the small subunit for exodeoxyribonuclease VII. Exodeoxyribonuclease VII is made of a complex of four small subunits to one large subunit. The complex degrades single-stranded DNA into large acid-insoluble oligonucleotides. These nucleotides are then degraded further into acid-soluble oligonucleotides. [DNA metabolism, Degradation of DNA].	2.92134e-07

>NZ_CP007520.1|WP_042733218.1|305917_307984_-|MBL-fold-metallo-hydrolase
MDKLKLFSIDFYRYLVNKHFFLMFLLLSCCFCCNLINSFDLKYLILTILFLSISISLNYKNFHLILIIFIVICLVFLGYKLWFKHDDLSFLNNKELQAKVVSKHNNYAILKYKNIKFYVSDFDNKFLLDQKINIIGTFKKLESNTNYYQFDFFDYLNKQFVTHQLDKYKINDISNGIRSSEWLSKNIYSNNLVSMFLLDKNNKSSDLNKVLSDLNLEFLLVLSSFNIHLFTRFFYKLNYKYKWTISLKYLFYVIVFLISYLTNFSYASLRIVVYFLVSEYFIFSKKKAPLIFKRFACLIICFLLTPSFLTSSSVLFVILAFLFVYENMFRNKFLNYITRSSLFTFYFIPLQIYTFYSFSIVTQISLIFLRPLFALIYFTIPIWLLINTSLLTNSLYKILTWIKKINFNINLGYFNVMFLLVVYLIVLIVMMYEFRNYKTWILLFFVLLVCYLVNWLLKPGVFLSMLNVGNANTFIFHDKYKNITIINDCGTGAGFSKQIPYEFLKYYGINKVDLIIISHYHADHFNGLETIQKHIRVDQVIDYNNFEHIKSFKGVNLYFFWNNLKSENNRSLVHILEYRDVRILFTGDIEKEAELNLVNNAYFRYVLSLKPIDILQIPHHGSKSSSTEEFIKLINPKYGLISANLRTYNFPNIETLTTLFKYNITYFETEKIGNCFFDYSSYRFWFKK
>NZ_CP007520.1|WP_042733217.1|305620_305866_+|30S-ribosomal-protein-S20
MANIKSQKKRVLTNEKSRLANRAFKSEIKTAIKKALAAKKADDANKEQLVKAAVSLVDKGLKKGIFKENKAAREKSRLMSA
>NZ_CP007520.1|WP_042733216.1|304475_305426_-|DNA-polymerase-III-subunit-delta
MYFVYSEDFFLMNQKIDEIIKKNQNKDNCEIKTFSLTEDDFNDIYDNVTNFSFFSDQTIIVITEAYFVNESKTSFNKNFSLTKLTEMIKNKNPNNIVIFAMNSNKFSKKLKIAKFIEQHCNVIYLKPYDQNQTIDYIIKYLNSKNKKIDNKLANEIYNYLPNDLQTITNELNKLASLTSQINLDIIKNVFAKYHQDDVFMLVDAFISNDISKFIKLYRDYVSINDDIIALISLLETNLTFYRDVLILKQQFLSQQEISSMLNSHPYRVKLAMNNKYNIKQLNDKIKIVYKIFKGIISSEMDKNIIVEYELIKNMGG
>NZ_CP007520.1|WP_042733215.1|303028_304474_-|hypothetical-protein
MQELYLQTIYLARNILKTEKLRYFIYKDNQFKNKFLTLINNIFTLEANYDQNIDGETFAKQFAKAFILITNQKEKQRFETFDNKTEEEMFSDIDTIIKSIIKDFKVAKTKLVDQTEKITSSEIQTLSVLSEEIISKWDQKLQQEDKPKQQENIKTQNEQENVEVDQNNQTVQQQDMNEIFKQFNQNMFENLKNKELPVLPIQDPRFYPYNSRPKFMPIFKIILSILSIISTILAISTLLFLSLNVLDISSNEYVEKLKANAWTHFMDSNRAQILKKIPLGGLKLIGVQGISLALLHILPAVLICSYTFKSNQNNREKYRMKLMPVILFVVMFGMMLGTLFNFISSKNIEASWKRDLLDLIQNNKEQFKNHFNGFWTLVTKNYGSKINIATILSAVCLSITIFTLIVAVILLVVNPKLDKERIIKANIEHQKAVMAIMSGESYEIDLSLYDTEEIEIKEPNKLQLFIMKLKNKKSNKSKKDE
>NZ_CP007520.1|WP_042733214.1|302361_302946_-|hypothetical-protein
MKRIDYFLKKDFRYLTESEKIELFQILEPPINFAIKKALSKFYKVPLEFQDMQSYAWMAFDDLLKKYQSKNIKKKFVSSVIDAVTWKCTDACVKYINNKHKVLNNVVYKTGKKDLKEDNVKEMSYSESTMGWEDLVEKYFQTTEEPLAREIFYMYANEVSKTRICETLDISRNKFTRILRKTISDLQELATPLL
>NZ_CP007520.1|WP_004427569.1|302032_302317_-|hypothetical-protein
MSYYYRHNFSFSYHGLQRAKERLKLKDKKDYEVKEICLNHIRNSTKSFQDSRHVYISASNTNIYFVVEKNNNLIITVTEISAEKQWKMYGGSSW
>NZ_CP007520.1|WP_042733213.1|301475_302039_-|dephospho-CoA-kinase
MIIGIFGKIGSGKTTISSKFTNFHPNFKIINADIVAKKCLEQEEVKNKLKKIDENILDNDNNIDRKYLREKIFSNKEFGQKIDDLLWPIISDEINKEISFDPAANYIIEAALLNKLKIPNIDFKVKVKSNLFKIAYRVKKRDGVSLFNIFKIWLKQTKLLKKVKSDITIKYFYELELYIQKNKIIVD
>NZ_CP007520.1|WP_004427571.1|301196_301412_+|exodeoxyribonuclease-VII-small-subunit
MNNEQKSYDELMQEIQEDTKKISSNDISLEEAMKIFEESIQKIKIAKEKLTEYKGKITKVLNDGELEEFNQ
>NZ_CP007520.1|WP_042733212.1|299797_301204_+|exodeoxyribonuclease-VII-large-subunit
MQKVLTVQELNQNLKNYLENIDYFKLIYVKGEISNLTLNKSGHVYFSIKDENATISCMIWKNNAHKLTQLNPKEGMQITCAGRITYYVVGGKVNFEVRDVQIEGIGELQKIYEERFVKLKQAGWFDQSIKKRLPNIVQNVGIITADSGAAIHDLVTTIHRRMPSTNIFLFPAQVQGNQSAHDVAEKIKQANSFATKLDVLIVGRGGGSYEDLWSFNEMELLQAIKDSDIPIVSAVGHEPDVTLADYVADVRAATPTAAGELVSRDIQELKKQLKYHLDKLRLQIENRYELESKDLLHLKSQQNKAVEFAISSKEILIEQLEYSIPESIKTKINNSYKDVSKIKELLLQNIQIAFNNQNIKIIESTNVLKNKSVYKLEQYKNNFNFMTSNFKSLISQKMKIEELRFESMANKLNLLNPKKPLENGYGIVTNENGIKITSYKDVKTNEKIKVFLIDGKLVANLEEVIANE
>NZ_CP007520.1|WP_042733211.1|299394_299796_+|transcription-antitermination-factor-NusB
MTSKISATAKRKILIQAFYKYQLLDANLNYIKQDILDDAQDIKDQEVYNEIEKIATNTDDIIESIKPHLSTKWKWERIPSVIRSILIVGVYEIKYTDTPKAVTINEMVEYTKSYVPDFDFKFVNAILDKIEEK
>NZ_CP007520.1|WP_082028300.1|309864_310878_+|BspA-family-leucine-rich-repeat-surface-protein
MKKKLLWIIAPILILLALIGTGIGVAVAKKPNSNTQNKTDEENKNPNQDNENQKINLSDLTKKVLGTIEEQNLNKKTILNKLKELNVEIKDRDLSSLSVEISEFSAVIKSTTKDLKFSGEVEVRFIPVDGNGSNNRRTAVYNEDKSICKKIGYSINQDGNWMVKQFDINTSKVPEELPWFITSLVGLFSENKNERIEGIEKWDTSNITVMSFMFERALSFNQPLNDWNTSNVTNMFAMFSGAKSFNQPLNNWNTSKVTNMRLMFDGAKSFNQDISNWDTSNVTDMTAMFQKAPSFNQDISNWNVDNVTEFEDFSHDFPESNHPEWTESKRPTFKIKN
>NZ_CP007520.1|WP_144402411.1|311735_312338_+|hypothetical-protein
MLISNEEKNIILEKVKGSRIRMVAICFDAYKKRFDQIYKNHEKISYYPEGKRMKVFNENNEYVDNFNSDSAFEQCFKTLVGLGFLDINLNGDYIPILQERSVEEIIDLIFSKYDKGNNQYYKDWINIYRQSKIISFLIELKIIDENNVNSLQLKKLKKTSEFDINKFKQYEIGRWEKEICLSEKTKNYIISKVLGHDFIK
>NZ_CP007520.1|WP_052491393.1|312359_314162_+|DUF262-domain-containing-protein
MQQNQETNSSINFTRSSISNFFKNYTDPKNIIQIPLYQREYCWEEENVLTLLEDLKLRVEDKKEHYFGMITTTEIKEDIYTRKKRIIDGQQRLTTSLILIHYLKSICSDKSLLNPLKQQFGHEIKFEYEYENDLSESMNILVKENDSSKVYEKISSNNIKNTYRIIKEFFKDKNINFNDYLDTFLNNFIFCISEFETNKNPSYEMEIFENLNSKGTPLREFDLIKNLIISQKTNKDAKTKISDFNLKIIKIFNNDHRGIKKSDVHKQVEIFIKHFLTWKKYNAKFSHYKLYKNFKNYLKDLNISDDESFTNMLDELQKFAILFLGIEFPLEKEVGNKLWLRVIDQKDVHIPYIFALFDKFSLFDKNKEKWNDNETILKYLKVLSAHLIKYMAVEGTGQSLSKFIEAINELTIEKQKSPNEIRKILNESTQENNLLLSNHSKEEFVQACLFPKRQTKWIYKSIIDIYEDSILSGSNEKIEYNAGKTLEHIMPQKHNSTWKNMVGYDENNPESQTKYVRFLEQPGNLVFVDGSKNSSIGNKSFSEKKKNLYEKSNSPLIIKELKYLENDVPAIVNCDEWNYEIIENRTKIIASTVFDIMNTD
>NZ_CP007520.1|WP_042733220.1|314412_315708_+|ATP-binding-protein
MNIIRNEYLDKLISKKHNGRVKIITGIRRCGKSYLLFNLFKNHLIENGVDQTQILTMNLDDIANVKYHNPIELYKYFLDKISNKDIQYYVFIDEIQNCKSIKNPYVEQDDQLINFTGVLIGLMLHENVDIYVTGSNSKMLSSEIVTEFRDRGDEIKVNPLTFKEIYNSKQVDNFDLKTYFIYGGMPFVYKIESNTEKAKYLQNLFTTTYIRDILDRYKINNEHLILETLLNFISSNIGSLTNPNKLSNRFLSESKIKINANTVSKYIEYFKEAYIISKAKRYDVKGAKYFSTPLKYYFTDIGLRNAWLNFSDLDRSHIMENIVYNELKARGFNVDVGYVTYDQKTDKSRNVYNLEIDFIANLIDTKYYIQVALNLDEPDKKEQEIRPLLQVKDNYKKIVIVYDDIFKHYDANGILYVGLKEFLLDNDVFNV
>NZ_CP007520.1|WP_004427559.1|315888_316242_+|30S-ribosome-binding-factor-RbfA
MSNLKAQKKKESQMLRELNLILQRELQNPVLNTVSVAEVRLSADGSHAKIFYSFLPINEEISKENVGKEIEEGLKEIRMILASKLDWRSVPNLNFEYDESLDRANHINEILAEQNSK
>NZ_CP007520.1|WP_042733221.1|316295_317165_+|tRNA-pseudouridine(55)-synthase-TruB
MNQKSGILILDKPKSISTNNLIQQVKKKLNIKKVGHCGTLDPLATGVVICLVNNATKISDYLLNNDKRYIVTLKLFAQTSSYDAETEIIKTEPSFEIDQTTLNNVINKYNNYTYDQTPPIYSAIKVDGKKLYEYALENKTVDIKSRTITIYETKFLNYDNKNHEITLDVYCSKGTYIRSLAVDIAKDLNTISYVKELRRTKSGSFDITKAQTIDQINWDNLITMYDAIKLSDYKIINYDDILSVKQGKKIKLDVNPDLVFISDKDNNLISCYERSNDDIFKTKRGGLDN
>NZ_CP007520.1|WP_042733222.1|317164_317725_+|riboflavin-kinase
MQYFNQAFSKIEPIKNNKKSIITIGNFDGFHIYHQKIINQVIDIAKKENLNSIVISFDKKIKNFVESKSYQKIATKEQKLNYINKNLKELDYFYDIKVNKKLTLTTREQFINDLKTKLNVIKIVEGEDFKFGWQAKGDINYLIVEFGTDNVIVEKRDNNISSSNIKKLIKENKIQEAKELLGIDFD
>NZ_CP007520.1|WP_042733223.1|317739_318459_+|SDR-family-oxidoreductase
MKKLVAITGASSGIGLACAKLFSEKGYPVLIMARRKEILDSLNLDNCVTARVDVRDIDQIKNAIKLAEEKFGPVDLMINNAGIMPMDKYADQDLQEKYDTLDINIKGVINGMDAVLPTMRKLNHGTIINISSVSGRYTSVDHAVYNGSKFAVNAITEQARRELSDTNIRFCLIEPAIVDTNLLSTTTNKEVLENHMKRKDKLNGGLSADQIAQTILYVYQLPQDVSIKELMISHTNQAV
>NZ_CP007520.1|WP_042733224.1|318820_319123_-|lipoprotein
MKKLLTILGSVAMVATTGAVAVACKTEAKKPAEDAKTPDGSQGGGDKKEDEGKDEKKEEESGGGAVKPGGEASEGGTVQPGGETVQPGSGGSTEEMKPSA
>NZ_CP007520.1|WP_042733225.1|319351_320488_+|N-acetylglucosamine-6-phosphate-deacetylase
MILKNAQIVLENEIIKNGYVIIKDKKIVEIGSDYKLNDAIDLENNFLLPGFIDCHTHGGYGVDFEQGDQNRFKTFADNIVKEGITRYVQSTVTNNDQKTETILKEFMKLNNAKAKCIGVHLEGPFISKFKKGAHQEDLIKDPDIKLVKKWNEISNNNIKIITYACELDNTDFTKYLLENNIIPSAGHSNIKADEFEPYYKLGVKHITHLFNAMSTVDHHNPGLAVSALNHKDILCEIIADNIHLKPEIIKLVYDHKTADNICLITDSISCKALDDGIYQLGNLKVNKSNNQARLVSNNALAGSVATYDSVVKNFKNITNISLTDLIKTTSINIAKQLNIYSYTGSIEVNKYADFVVLDKDLNVLKTIVEGKIVFEKTV

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Crispr_ID: NZ_CP007520_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP007520_4

462057-462158

Orphan

Consensus_repeat	Method
ACTCATATTTGTAACATTTGAAGTAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP007520_4

>merge|NZ_CP007520|4|462057-462158|CRISPRCasFinder
ATACATATCTGTTACATTTTCGGTATTTCAATTACTTATATTTTGATTAAAATAAACAGCTTGTCTAAACATAGCTTGCATATTTATTACATTAGAAACATC

>NZ_CP007520|4|3|462057-462158|CRISPRCasFinder
ATACATATCTGTTACATTTTCGGTAT	TTCAATTACTTATATTTTGATTAAAATAAACAGCTTGTCTAAACATAGC
TTGCATATTTATTACATTAGAAACATC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007520.1\|WP_042733306.1\|450630_451938_-\|ribosome-biogenesis-GTPase-Der	unknown	unknown	gnl\|CDD\|234628
NZ_CP007520.1\|WP_042733315.1\|463644_465861_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|273632
NZ_CP007520.1\|WP_042733321.1\|471881_472454_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007520.1\|WP_042733311.1\|455870_457220_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|284141
NZ_CP007520.1\|WP_042733313.1\|457956_459303_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007520.1\|WP_042733308.1\|452618_453305_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007520.1\|WP_052491402.1\|459650_461150_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007520.1\|WP_042733320.1\|471283_471871_-\|YihA-family-ribosome-biogenesis-GTP-binding-protein	unknown	unknown	gnl\|CDD\|234770
NZ_CP007520.1\|WP_042733310.1\|455121_455868_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|226164
NZ_CP007520.1\|WP_042733307.1\|451937_452606_-\|(d)CMP-kinase	unknown	unknown	gnl\|CDD\|234579
NZ_CP007520.1\|WP_042733314.1\|461191_461767_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007520.1\|WP_042733318.1\|467399_468317_+\|Fic-family-protein	unknown	unknown	gnl\|CDD\|225718
NZ_CP007520.1\|WP_042733322.1\|472443_473070_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007520.1\|WP_042733309.1\|453406_455158_-\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|226165
NZ_CP007520.1\|WP_042733323.1\|473071_473758_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007520.1\|WP_042733324.1\|473849_474557_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|234767
NZ_CP007520.1\|WP_042733317.1\|466887_467154_-\|30S-ribosomal-protein-S15	unknown	unknown	gnl\|CDD\|180170
NZ_CP007520.1\|WP_042733316.1\|465870_466521_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007520.1\|WP_042733319.1\|468358_471277_-\|cation-translocating-P-type-ATPase	unknown	unknown	gnl\|CDD\|319781
NZ_CP007520.1\|WP_042733312.1\|457475_457829_-\|membrane-protein	unknown	unknown	gnl\|CDD\|275347

Protein	Function_ID	Function_description	E-value
NZ_CP007520.1\|WP_042733306.1\|450630_451938_-\|ribosome-biogenesis-GTPase-Der	gnl\|CDD\|234628	PRK00093, PRK00093, GTP-binding protein Der; Reviewed.	0
NZ_CP007520.1\|WP_042733315.1\|463644_465861_-\|AAA-family-ATPase	gnl\|CDD\|273632	TIGR01448, recD_rel, helicase, putative, RecD/TraA family. This model describes a family similar to RecD, the exodeoxyribonuclease V alpha chain of TIGR01447. Members of this family, however, are not found in a context of RecB and RecC and are longer by about 200 amino acids at the amino end. Chlamydia muridarum has both a member of this family and a RecD. [Unknown function, Enzymes of unknown specificity].	3.92628e-117
NZ_CP007520.1\|WP_042733317.1\|466887_467154_-\|30S-ribosomal-protein-S15	gnl\|CDD\|180170	PRK05626, rpsO, 30S ribosomal protein S15; Reviewed.	1.03639e-40
NZ_CP007520.1\|WP_042733311.1\|455870_457220_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|284141	pfam06646, Mycoplasma_p37, High affinity transport system protein p37. This family consists of several high affinity transport system protein p37 sequences which are specific to Mycoplasma species. The p37 gene is part of an operon encoding two additional proteins which are highly similar to components of the periplasmic binding-protein-dependent transport systems of Gram-negative bacteria.It has been suggested that p37 is part of a homologous, high-affinity transport system in M. hyorhinis, a Gram-positive bacterium.	4.77884e-29
NZ_CP007520.1\|WP_042733310.1\|455121_455868_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|226164	COG3638, COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism].	2.77167e-77
NZ_CP007520.1\|WP_042733307.1\|451937_452606_-\|(d)CMP-kinase	gnl\|CDD\|234579	PRK00023, cmk, (d)CMP kinase.	7.76458e-81
NZ_CP007520.1\|WP_042733320.1\|471283_471871_-\|YihA-family-ribosome-biogenesis-GTP-binding-protein	gnl\|CDD\|234770	PRK00454, engB, GTP-binding protein YsxC; Reviewed.	7.20878e-92
NZ_CP007520.1\|WP_042733309.1\|453406_455158_-\|ABC-transporter-permease-subunit	gnl\|CDD\|226165	COG3639, COG3639, ABC-type phosphate/phosphonate transport system, permease component [Inorganic ion transport and metabolism].	6.97169e-21
NZ_CP007520.1\|WP_042733324.1\|473849_474557_+\|hypothetical-protein	gnl\|CDD\|234767	PRK00448, polC, DNA polymerase III PolC; Validated.	0.00131657
NZ_CP007520.1\|WP_042733318.1\|467399_468317_+\|Fic-family-protein	gnl\|CDD\|225718	COG3177, COG3177, Fic family protein [Function unknown].	3.95483e-25
NZ_CP007520.1\|WP_042733319.1\|468358_471277_-\|cation-translocating-P-type-ATPase	gnl\|CDD\|319781	cd02089, P-type_ATPase_Ca_prok, prokaryotic P-type Ca(2+)-ATPase similar to Synechococcus elongatus sp. strain PCC 7942 PacL and Listeria monocytogenes LMCA1. Ca(2+) transport ATPase is a plasma membrane protein which pumps Ca(2+) ion out of the cytoplasm. This prokaryotic subfamily includes the Ca(2+)-ATPase Synechococcus elongatus PacL, Listeria monocytogenes Ca(2+)-ATPase 1 (LMCA1) which has a low Ca(2+) affinity and a high pH optimum (pH about 9) and may remove Ca(2+) from the microorganism in environmental conditions when e.g. stressed by high Ca(2+) and alkaline pH, and the Bacillus subtilis putative P-type Ca(2+)-transport ATPase encoded by the yloB gene, which is expressed during sporulation. This subfamily belongs to the P-type ATPases, a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	0
NZ_CP007520.1\|WP_042733312.1\|457475_457829_-\|membrane-protein	gnl\|CDD\|275347	TIGR04554, hypothetical_protein_MMCAP2_0629, three transmembrane helix protein. Members of this rare family are small, highly hydrophobic, and restricted so far to the genus Mycoplasma, where it appears not be be essential. All members have three hydrophobic transmembrane helical segments.	2.33149e-38

>NZ_CP007520.1|WP_042733314.1|461191_461767_+|hypothetical-protein
MNYKSHKFLKYLATIGSVILSISLLIIYLQKGQDNKKIFNSLQPYIALEIILLILGSLFLISYMFIRWKWKNKSDYKYTKKDIIYLITGFSLYSSTILITTIYFVLSLLINDQNSIKILFYVLLPITFLLMIVASIFETLSRINEQLFLYKKEYEKIEKENETKIKVDFTKTKNNNESQIKLDDPENPFKD
>NZ_CP007520.1|WP_052491402.1|459650_461150_+|hypothetical-protein
MKKISRYLWILILLIVGVFAAQTYLNKSYNVPDLTGKTDYRSNYNRKYGLMWGGHALRYYLYRNSSAYDTNKTEYENFIKNIEEQTLNINFLNSKQSIVQRQDFKYSLISSVMVTSEYGSTSAQEFFAESFSKYVSSNDNQKNVTWYLLEHFFTKTFKQLKNNFSGGITNTDKWIKIKDLIDNDANKVSKEIKYDINLDPNKQNLNPSDLGYTNVINGNRYIYGFFNRRYVTDTITNLGKQIFSPDFEFNNYAISRIGQQKFGTYAKKLMSSTLYNPYQKIQHTKQTKNKWSNIDQLDEYWKDISKFKTKNGKQESSIQIKKNLDAAYEDEKDFKKDDLYEETLKLFNIIYKIAGDDFRKIFINLILTNDKKIKGIGDATGVNGITSTQSLTDDSTTVYSFIIIRDKSFKSKENQHQFNWSWFSSNNRFQTLHHEFGHVLDAYLSKDNSFSELFDEDDYKLTQQGRLYAGDTPVKDVYALVDKKKALRFGHMSGCKCCC
>NZ_CP007520.1|WP_042733313.1|457956_459303_-|hypothetical-protein
MSSKKLKDFMTNTILEKINYYTSKKFDLNTIKEMLAIDLIDIEDDLITLVDKYIMYVIWLENNHKDKSNAFIKFLNKLDNSKKQVIDQTNRIQKQQDNLVEYEHRKQDQEKIDHYLSKIFNKYKTNIDQHNSSLNTYHQQKVQNQIKDDQHIETNQQFTPNLENQLDNSLIDSEIKTKDLIIDNKDLIANNLQVETDLSIIENTINLDSESEIKIENKTQVDDKLDSYSTDDKISDDEEKIGDYYKNIWTLSEQNNQDEEIDLNDDLTDNQELEFAKTIDDINSDLITHDPDEFATSTVNWSDYTDNSNTEEEITSKEDYFEIEEEITANNDFEIEDLTDNQELELAKTIDDINGDLITHVPEDFATSTVNWSNYTDNQDQTIKDQEEVLELTHSPKLGEKINYKDKNYSVVGMSIKKDENGKDKPVIKLVSNDGSEQTTDITFIKKY
>NZ_CP007520.1|WP_042733312.1|457475_457829_-|membrane-protein
MNTLLVTAEIFGKDIKPVAIIALLLSLLVFGIFSFLVYKNKVKIVEQKSTVIVAINYIIAFIALVLSSVAISKYNSPGLGDLFSNNLPATLRGLAYSGLVFSLIASGMTGYLYSKWK
>NZ_CP007520.1|WP_042733311.1|455870_457220_-|ABC-transporter-substrate-binding-protein
MKTNKLKMMLAMTGAVTAGSIVPFAVSCTKTSGWQEIITIKNAWVNEGFLNTEKETKFLETLENKFESFKNQDDSLKNFKKVKFKIGVDGAKKAYLSKLEKDTEGDDVLITNYSYYLNGLFDPVKNEVKSDLPFQLVSQASTLRFTWQDNINEMYNKANGNKNDKIVADAVKNNQKWIDETGKEYPEWNTIEKTDKKPDGTLTFDGSKYTNFYEKDKLSYVYRGAILISGKKAEREKITQQWNSKDFDEFIKNGIVYEKDSSAGSFKYQAALIARHFNKDLTEVTKILKGEVEKYKKHIFKGVGAAKQLGKEVAVGAEKIIPRIGFDDEGAYNWTQSNPEKSKYQPKGFEKNKNVKDENYDNDVVRTLTFTNPAGYDVVLARKGLMTKQVELLSKALTSLTLDENTYGIYTGYNKFQNLTEEMFNNFIKLQAQAETTKDLVTKIDEAKL
>NZ_CP007520.1|WP_042733310.1|455121_455868_-|ATP-binding-cassette-domain-containing-protein
MNKIIDLKNITVCYNNKKEPVLDNINLEINKKEFIAIIGPSGVGKSTLFKVIINSLKPIKGTAEVLNQDLLKLSKKQKNQMLSKIGFLTQKPNLINTENVYNNITRSISQYKNVFYRIFNILSKEQKINIFTKLDELKILDKAFYKVSELSGGQQQRVEIAKLLVKNVELILADEPTSNLDHQTSLEVITLLKQIAKEKTVLVNIHDLSLVKNNFDRVIAINNKTIVLDKKTEEIEEWELKEIIKNKQ
>NZ_CP007520.1|WP_042733309.1|453406_455158_-|ABC-transporter-permease-subunit
MRTKRDNKKQTVVKQSNFFKYRYINFDTNTTTSWKFHSIYYHIFAFILIAIVAWAFYTHSSGIRFYNFSKTFKQILNILSFGNKNFETAGRASGEYTNLFVDSLKYLWITIKFALVGTFIGFLFALVTAYFSFAKTTNKITSALLSFIILFLRSIPELVFIKLITGSVRNEFSLLFVYIWFTWLWLHKYYFEMLNSIDLEWYINSINHGNSKTRAFFKEIYPRIKNRIVALFIFSFESNIRWASILGALSLPGIGKLIYYASQTASNFDQLAVPLTVLMVFILILELLNYLFKKHLVEAKTKVIKQRNETKIQYYNRLTKKVNFNKWIILSIFLFVFIFSIYTLATTQLSLFDLSSLKEFLRDFFNPDFSKFSFLTKDANFNPILLFWNSFSFSLAAISLCFILTLFLIRVQCLSLNNRIKVMVFRSINVFIRLIPTIVYYYVFLFIFENDLTLLIIAIVLHQSSSQTKQLVEVIDNLDQEIIKNLKMQGYSNNQIFIRYVLPSIKVEYISLLTFYFELIFRSSITYSILTQGRLLIGSNIDHYLDPRFNNGIRIALAYVWLSTFYIIFINLISKLIIKTIKK
>NZ_CP007520.1|WP_042733308.1|452618_453305_-|hypothetical-protein
MKTKPISRNEIFAKEIALINQETKQAGHDGKYSDYIEEVISKLKEIDNQFFTNVLSMTNKEFEESKFYLGKSANDEAINQEIIENIKSQLYLLKELNIQEAIDKKQKVQTNFLDDYKYYFSNLEELHHSTYLKLQQNTNKYKNLELVENNFTKIAKASIKKEVNKTSDNISKKSINELVKECKEMNLKKLSDLDRKKQIYEIKFRWFSILSPIFVLIMVISIILPIYV
>NZ_CP007520.1|WP_042733307.1|451937_452606_-|(d)CMP-kinase
MKKLIVAVDGTSGSGKSVTFKKIADIVDYQFIDTGLMYRALTWFCLDQKIDHTDENQVIKLLDKFDYKVDKDDVFVNNVNVTNSLQNNEIINIINYITPIKEVREFMVKKQRDMVKNGGYIEIGRDITSVVLPNADLKIYLDSSIESRAQRRYDQNIKNNIIGKTYEEIKSDLEKRDHTDKTRSTGPLVLVDDAWYIDNSNLTIDQVVDLVVNKIKQLEREK
>NZ_CP007520.1|WP_042733306.1|450630_451938_-|ribosome-biogenesis-GTPase-Der
MKKGIVAIVGRPNVGKSSLFNRIIREKKSIVEDTPGVTRDRIYGNAEWLTREFIVIDTGGITLKEEQFTREIKVQAEIAMQEADVIVFVLDSQQGITNEDKMVAKMLYKTKKPVVLVANKYDKKQTGVESYEYLSLGFDQAVMVSSTHGIGIGDLLDRVINLMPKNDSNIKDDSTRIAIIGRPNVGKSSLVNSLVGEERMIVSDIAGTTLDAVDTKFKYHHKEYTLIDTAGIRRKSKIYEGIEKYSYLRSLSTINNSDVVLLMIDASKNITDQDTNIGGLAFEEKKPIIIVANKWDLVKNKEEQLLKKEEEIRAYFKYLQYAKIIFISALDKTRISKIIDSIEEIKESLSTKIKTHVLNEVLNRAQLINPAPEHNGGRLKIYYANQVDAYLPTFVLFVNNPNFVHFSYKRFIENQIRLQFGFEGVPINIIFRERK
>NZ_CP007520.1|WP_042733315.1|463644_465861_-|AAA-family-ATPase
MEKQIKLRGYISKFIYLSGNWGLAIFTSEENEKKTIKIKGQIGLMKTKVLYEITGSVNTHAKYGSSFDVVNFDFAQIDNKQQIINFLKSDVFPGVGNLTAKKIAEHYSENFIQEILDDKEKFLSIQGINKSKLEHIYDIIYDINQNNSLTSEFINNKLNLNILEKSQWYVNSQEELINIFTNNFFEFAFQRNLGNIEDIDKIWLHFSKNPYDINRIAYWAFHCCDEILFSTGDSYTNKEALFRKIKEFINIDINENKDLLLSSLLHAKDHNLLVFKENRIYTHNSYYDEQEIALSLDYHLKNNLNNSIDEQTLDKYILEIENEIASSKNIKDFKYDNSQINALKTFAKNNIIIITGGPGTGKTTIIQAIVKLMQKMYKKSKFSISTPTGRAAAKIRENFIESEATTIHRLLEYDGDENRFLINKHNALSFDLLIVDECSMIDNRLFSQFLQSSLKAKKIVLVGDPEQLPSVNYGNVFFDIIKTNTIPTINLEHIHRQKENNGIIDLAYMIKNNTFDITKVDQLNNVKFIFNTDKKYCLEQIKTNYAKDLDFNNPYNTQIICPMYAGTLGINNLNDLIQSNFNFNINDQQKIYQRAKNKYIESDKIMYLKNDSKLNISNGDVGIIDSIIYKNNKFDFAIVNFNNTILEFNNQNFDDLTLSYACSVHKTQGSEYDKVILVLDATHFNQFIDKKLLYTAITRAKKELIIITKEDIFIQGINRSSKKRNTTLQEVIISTLNK
>NZ_CP007520.1|WP_042733316.1|465870_466521_-|hypothetical-protein
MQEQQKQRLLNEIKFQNSRTPIWINFLVQILTVVSLFLVILFLVGGDLQNFNFNYYKKLGKLAYLYLALICLAYLILVTFINWILIWFNVLKSDALSYCLGLAMLCVSIIYTGDLMYNWTVSYTVKSLVRFVIAIVSGLIGVIIGTLLSMLQRNKEYQIEEENKIILLAYQNGEIIPTKKQLRAIKKLEYKYKKEQEELELIEFKNNLYKNKNTNQ
>NZ_CP007520.1|WP_042733317.1|466887_467154_-|30S-ribosomal-protein-S15
MISKQDKLALIKELGGSEKNTGLAEVQIAILTKEIANMTEHLKVHKKDVPTRRSLLKKVAQRRHFLNYLVRKDVNRYKAIIEKLGIRK
>NZ_CP007520.1|WP_042733318.1|467399_468317_+|Fic-family-protein
MYLTIKQTSDKWNLSEQEILDLINQNKIYGFIKENNEYKIPMDLDNPLDLIGVDLLELIDKRMEIIESFTPLEEHELNRINNDFAIEYAYNSNAIEGNTLSLREVYFIFKGMVIDKKPLKDHLDVIGHKQAFEYVLDLTKNKHGLLTEEKIKKIHNLVLIHDWRNAGVYRNVPVVISNSKHDVADVYMIQAKMQQLLDWYYNSNEHIIKKIAKFHLNFKEIHPFIDGNGRTGRLLINFELMKNGYYPIDIKYINRNLYYQAFDDYHTKNDLSTMLNLIANYELLRINYFIRILSDREKLIKQRKE
>NZ_CP007520.1|WP_042733319.1|468358_471277_-|cation-translocating-P-type-ATPase
MTDYKTQSLSEVESSLKTDFKNGLTEAEANLRLTKNGKNALPVKKPTPAVVLFLKALARPIQIVLFIAAIISIIAPLIAKHTLKPHFEDFIDFIVIMFVILLDATLETVQEIRARKSVDALKSLSQPKAIVIRDQISREIDATDLVVGDIVVLEAGKYVPAELRLIETSDCMVDESILTGESLSVEKASNAIKKTKILSDMKNIAFMSTFITSGRAVGVVIETGVNTEIGKISKAVSENEDQTTSLGRKINKFSYLISFIAVVISAFIFLLFLFTGNRDSWASYLMVAITLAIGVIPESLSAIVSITLSFSTKRMVKENVIVKKLESIETLGSVNVICTDKTGTLTQNKMTIEKVIWNNKVINSDEFVNLKANDAKNMFLKALVLPNDSITENGERIGDPTELALVDFAEMMNVDEQKFRKKYKRLDEIPFDSERKLMTTVNSLENNQKVVFTKGALDELLKKCKKIYLDNKIVKLTSDHKKEIKKATSTLSDDALRVLGYAFKIISDDDKNYESDLIFIAATGMIDPVRLEAVQAINEARKAGIKVVMITGDHAITALAIGKALDLAYTPYEVLTSEKLEQFSDQELASAIDNIKIFARVNPEHKVRIVQALQNKGYIVSMTGDGVNDAPSLSKADIGVAMGITGTDVAKQAADAILTDDNFKTIIKGVVEGRNVFQKIRRAIVLLLGFNLANVLSIVLISLFLKVSPFEASNILFINLVVDSCLAFGIGMSPLDNSLILLKPQKKNDGILKDIVWPIFQIGLSLSVAQIISFIIAMSATDMNYWMDQTKTKADNWFLFIQNNRNYFLINPTKLNEFIIFGRTAMFITSVVAPTIFSHLIKLTNWKETRKIDWTVSKPLIVGSSIVLIVSMLAFVIPGVNDTVFGLLSVNKQNHLSWNSNNFWILFTSLACALIPTLFMTITDLIQFYSYHLSSRSWENNQKLIAQLVEQDNKTQVLEQDKKKKQTKSKTN
>NZ_CP007520.1|WP_042733320.1|471283_471871_-|YihA-family-ribosome-biogenesis-GTP-binding-protein
MIKQAVFIKSAADRSGWINDEISEICFVGRSNVGKSSFINSLTNNNKLAKVANTPGKTRLLNFFDINKSQFRLVDAPGYGYAKINDATKIQFAKMMQDYFVNRKNLKGVFMLVDLRHKPTKDDIQMYEFLKYYNIKVVIVGTKLDKLKRNEYSKNEQMIKQTLGFVSSDSFIKISNLNKTNISECYDKINELLEE
>NZ_CP007520.1|WP_042733321.1|471881_472454_-|hypothetical-protein
MISNNISSSLISSIVLYVLILCLSIFIFISNFYLLFQIKVRLKLIKKENLLYLYNHKNYLIVLFNSLFDFVLLIIVSVIFSLYINQNISNKYYVFEICVIIKIINVILLYFLNPKLIKTILVINTTKYLIFSNTLIEMEKIFSIRFENKTFKKVVINYFDQNNNKEQIKLYINKNLEKWFKDNLNKYIKD
>NZ_CP007520.1|WP_042733322.1|472443_473070_-|hypothetical-protein
MDKIIAFIVLLIIYFILLIVMGLLAYLYQIKNQAFINYNKEFFKKWNEYKLKHKHENLNQTTFKFELPVDEIALLEKDFLISVNDKVKVKTKLKKQVKQNLIKDFLYDDYLFLKENVKLKKRVDYQLQQSTIYLTNKRVVINLLDSYFKILITDIKSISVCVIKKNDQFLDSCYLTTNKQEIQITGEVFDFVLTIQKLIRKRDENNDK
>NZ_CP007520.1|WP_042733323.1|473071_473758_-|hypothetical-protein
MSNNHQEVELDFFEPSLGLIIANLDNVLDELNKDNNNYIQLENLINEFENIESLDNWDQLVNKLEKLEDLIINELVNIKDSSVFNLISSLQISKHLAFLLKQNNFVFKQLDELENNSNAMKWNHQQDYIDFYKQVIVEKSNQLLKENKQLFEQLNSKKDEFKKVYNVLISEQVFDDLLEGNKLLIDILKLNINFNDILDLKRLSILNKIQAYLEFINFWQQTINLEEE
>NZ_CP007520.1|WP_042733324.1|473849_474557_+|hypothetical-protein
MIEIYKLKDLNSYDLQAYSHINPWFKNRLNKLILKNKKWILNFNLNPNDYITFDDITEVKLDKVFKEVNNYLNFFKPKIKQIITEKQLFKKFSNSIRNYMMLVGMCHAINTMIDFYKQLDKEVVLNKQQLVYLLANEVLDKKFERYTIEVLKLIPDEYKNNLKDLYSEKIEIHNSFFNSKQFVKWTAKYASRLFNNEKINQKDYLKILYLCYLENDFNRSYISLLQEFVNKLVQE

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Crispr_ID: NZ_CP007520_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP007520_6

462666-462767

Orphan

Consensus_repeat	Method
ACTCATATTTGTAACATTTGAAGTAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP007520_6

>merge|NZ_CP007520|6|462666-462767|CRISPRCasFinder
ACTCATATTTTTAACTTTAGAAGTATTTCAAGAAGAAATAACTTTGTTAAATGCTTTGCTTTTAGCAAACATTAAACTCATATCAGTTACATTTGAAGTATC

>NZ_CP007520|6|5|462666-462767|CRISPRCasFinder
ACTCATATTTTTAACTTTAGAAGTAT	TTCAAGAAGAAATAACTTTGTTAAATGCTTTGCTTTTAGCAAACATTAA
ACTCATATCAGTTACATTTGAAGTATC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007520.1\|WP_042733306.1\|450630_451938_-\|ribosome-biogenesis-GTPase-Der	unknown	unknown	gnl\|CDD\|234628
NZ_CP007520.1\|WP_042733315.1\|463644_465861_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|273632
NZ_CP007520.1\|WP_042733321.1\|471881_472454_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007520.1\|WP_042733311.1\|455870_457220_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|284141
NZ_CP007520.1\|WP_042733313.1\|457956_459303_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007520.1\|WP_042733308.1\|452618_453305_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007520.1\|WP_052491402.1\|459650_461150_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007520.1\|WP_042733320.1\|471283_471871_-\|YihA-family-ribosome-biogenesis-GTP-binding-protein	unknown	unknown	gnl\|CDD\|234770
NZ_CP007520.1\|WP_042733310.1\|455121_455868_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|226164
NZ_CP007520.1\|WP_042733307.1\|451937_452606_-\|(d)CMP-kinase	unknown	unknown	gnl\|CDD\|234579
NZ_CP007520.1\|WP_042733314.1\|461191_461767_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007520.1\|WP_042733318.1\|467399_468317_+\|Fic-family-protein	unknown	unknown	gnl\|CDD\|225718
NZ_CP007520.1\|WP_042733322.1\|472443_473070_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007520.1\|WP_042733309.1\|453406_455158_-\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|226165
NZ_CP007520.1\|WP_042733323.1\|473071_473758_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007520.1\|WP_042733324.1\|473849_474557_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|234767
NZ_CP007520.1\|WP_042733317.1\|466887_467154_-\|30S-ribosomal-protein-S15	unknown	unknown	gnl\|CDD\|180170
NZ_CP007520.1\|WP_042733316.1\|465870_466521_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007520.1\|WP_042733319.1\|468358_471277_-\|cation-translocating-P-type-ATPase	unknown	unknown	gnl\|CDD\|319781
NZ_CP007520.1\|WP_042733312.1\|457475_457829_-\|membrane-protein	unknown	unknown	gnl\|CDD\|275347

Protein	Function_ID	Function_description	E-value
NZ_CP007520.1\|WP_042733306.1\|450630_451938_-\|ribosome-biogenesis-GTPase-Der	gnl\|CDD\|234628	PRK00093, PRK00093, GTP-binding protein Der; Reviewed.	0
NZ_CP007520.1\|WP_042733315.1\|463644_465861_-\|AAA-family-ATPase	gnl\|CDD\|273632	TIGR01448, recD_rel, helicase, putative, RecD/TraA family. This model describes a family similar to RecD, the exodeoxyribonuclease V alpha chain of TIGR01447. Members of this family, however, are not found in a context of RecB and RecC and are longer by about 200 amino acids at the amino end. Chlamydia muridarum has both a member of this family and a RecD. [Unknown function, Enzymes of unknown specificity].	3.92628e-117
NZ_CP007520.1\|WP_042733317.1\|466887_467154_-\|30S-ribosomal-protein-S15	gnl\|CDD\|180170	PRK05626, rpsO, 30S ribosomal protein S15; Reviewed.	1.03639e-40
NZ_CP007520.1\|WP_042733311.1\|455870_457220_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|284141	pfam06646, Mycoplasma_p37, High affinity transport system protein p37. This family consists of several high affinity transport system protein p37 sequences which are specific to Mycoplasma species. The p37 gene is part of an operon encoding two additional proteins which are highly similar to components of the periplasmic binding-protein-dependent transport systems of Gram-negative bacteria.It has been suggested that p37 is part of a homologous, high-affinity transport system in M. hyorhinis, a Gram-positive bacterium.	4.77884e-29
NZ_CP007520.1\|WP_042733310.1\|455121_455868_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|226164	COG3638, COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism].	2.77167e-77
NZ_CP007520.1\|WP_042733307.1\|451937_452606_-\|(d)CMP-kinase	gnl\|CDD\|234579	PRK00023, cmk, (d)CMP kinase.	7.76458e-81
NZ_CP007520.1\|WP_042733320.1\|471283_471871_-\|YihA-family-ribosome-biogenesis-GTP-binding-protein	gnl\|CDD\|234770	PRK00454, engB, GTP-binding protein YsxC; Reviewed.	7.20878e-92
NZ_CP007520.1\|WP_042733309.1\|453406_455158_-\|ABC-transporter-permease-subunit	gnl\|CDD\|226165	COG3639, COG3639, ABC-type phosphate/phosphonate transport system, permease component [Inorganic ion transport and metabolism].	6.97169e-21
NZ_CP007520.1\|WP_042733324.1\|473849_474557_+\|hypothetical-protein	gnl\|CDD\|234767	PRK00448, polC, DNA polymerase III PolC; Validated.	0.00131657
NZ_CP007520.1\|WP_042733318.1\|467399_468317_+\|Fic-family-protein	gnl\|CDD\|225718	COG3177, COG3177, Fic family protein [Function unknown].	3.95483e-25
NZ_CP007520.1\|WP_042733319.1\|468358_471277_-\|cation-translocating-P-type-ATPase	gnl\|CDD\|319781	cd02089, P-type_ATPase_Ca_prok, prokaryotic P-type Ca(2+)-ATPase similar to Synechococcus elongatus sp. strain PCC 7942 PacL and Listeria monocytogenes LMCA1. Ca(2+) transport ATPase is a plasma membrane protein which pumps Ca(2+) ion out of the cytoplasm. This prokaryotic subfamily includes the Ca(2+)-ATPase Synechococcus elongatus PacL, Listeria monocytogenes Ca(2+)-ATPase 1 (LMCA1) which has a low Ca(2+) affinity and a high pH optimum (pH about 9) and may remove Ca(2+) from the microorganism in environmental conditions when e.g. stressed by high Ca(2+) and alkaline pH, and the Bacillus subtilis putative P-type Ca(2+)-transport ATPase encoded by the yloB gene, which is expressed during sporulation. This subfamily belongs to the P-type ATPases, a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	0
NZ_CP007520.1\|WP_042733312.1\|457475_457829_-\|membrane-protein	gnl\|CDD\|275347	TIGR04554, hypothetical_protein_MMCAP2_0629, three transmembrane helix protein. Members of this rare family are small, highly hydrophobic, and restricted so far to the genus Mycoplasma, where it appears not be be essential. All members have three hydrophobic transmembrane helical segments.	2.33149e-38

>NZ_CP007520.1|WP_042733314.1|461191_461767_+|hypothetical-protein
MNYKSHKFLKYLATIGSVILSISLLIIYLQKGQDNKKIFNSLQPYIALEIILLILGSLFLISYMFIRWKWKNKSDYKYTKKDIIYLITGFSLYSSTILITTIYFVLSLLINDQNSIKILFYVLLPITFLLMIVASIFETLSRINEQLFLYKKEYEKIEKENETKIKVDFTKTKNNNESQIKLDDPENPFKD
>NZ_CP007520.1|WP_052491402.1|459650_461150_+|hypothetical-protein
MKKISRYLWILILLIVGVFAAQTYLNKSYNVPDLTGKTDYRSNYNRKYGLMWGGHALRYYLYRNSSAYDTNKTEYENFIKNIEEQTLNINFLNSKQSIVQRQDFKYSLISSVMVTSEYGSTSAQEFFAESFSKYVSSNDNQKNVTWYLLEHFFTKTFKQLKNNFSGGITNTDKWIKIKDLIDNDANKVSKEIKYDINLDPNKQNLNPSDLGYTNVINGNRYIYGFFNRRYVTDTITNLGKQIFSPDFEFNNYAISRIGQQKFGTYAKKLMSSTLYNPYQKIQHTKQTKNKWSNIDQLDEYWKDISKFKTKNGKQESSIQIKKNLDAAYEDEKDFKKDDLYEETLKLFNIIYKIAGDDFRKIFINLILTNDKKIKGIGDATGVNGITSTQSLTDDSTTVYSFIIIRDKSFKSKENQHQFNWSWFSSNNRFQTLHHEFGHVLDAYLSKDNSFSELFDEDDYKLTQQGRLYAGDTPVKDVYALVDKKKALRFGHMSGCKCCC
>NZ_CP007520.1|WP_042733313.1|457956_459303_-|hypothetical-protein
MSSKKLKDFMTNTILEKINYYTSKKFDLNTIKEMLAIDLIDIEDDLITLVDKYIMYVIWLENNHKDKSNAFIKFLNKLDNSKKQVIDQTNRIQKQQDNLVEYEHRKQDQEKIDHYLSKIFNKYKTNIDQHNSSLNTYHQQKVQNQIKDDQHIETNQQFTPNLENQLDNSLIDSEIKTKDLIIDNKDLIANNLQVETDLSIIENTINLDSESEIKIENKTQVDDKLDSYSTDDKISDDEEKIGDYYKNIWTLSEQNNQDEEIDLNDDLTDNQELEFAKTIDDINSDLITHDPDEFATSTVNWSDYTDNSNTEEEITSKEDYFEIEEEITANNDFEIEDLTDNQELELAKTIDDINGDLITHVPEDFATSTVNWSNYTDNQDQTIKDQEEVLELTHSPKLGEKINYKDKNYSVVGMSIKKDENGKDKPVIKLVSNDGSEQTTDITFIKKY
>NZ_CP007520.1|WP_042733312.1|457475_457829_-|membrane-protein
MNTLLVTAEIFGKDIKPVAIIALLLSLLVFGIFSFLVYKNKVKIVEQKSTVIVAINYIIAFIALVLSSVAISKYNSPGLGDLFSNNLPATLRGLAYSGLVFSLIASGMTGYLYSKWK
>NZ_CP007520.1|WP_042733311.1|455870_457220_-|ABC-transporter-substrate-binding-protein
MKTNKLKMMLAMTGAVTAGSIVPFAVSCTKTSGWQEIITIKNAWVNEGFLNTEKETKFLETLENKFESFKNQDDSLKNFKKVKFKIGVDGAKKAYLSKLEKDTEGDDVLITNYSYYLNGLFDPVKNEVKSDLPFQLVSQASTLRFTWQDNINEMYNKANGNKNDKIVADAVKNNQKWIDETGKEYPEWNTIEKTDKKPDGTLTFDGSKYTNFYEKDKLSYVYRGAILISGKKAEREKITQQWNSKDFDEFIKNGIVYEKDSSAGSFKYQAALIARHFNKDLTEVTKILKGEVEKYKKHIFKGVGAAKQLGKEVAVGAEKIIPRIGFDDEGAYNWTQSNPEKSKYQPKGFEKNKNVKDENYDNDVVRTLTFTNPAGYDVVLARKGLMTKQVELLSKALTSLTLDENTYGIYTGYNKFQNLTEEMFNNFIKLQAQAETTKDLVTKIDEAKL
>NZ_CP007520.1|WP_042733310.1|455121_455868_-|ATP-binding-cassette-domain-containing-protein
MNKIIDLKNITVCYNNKKEPVLDNINLEINKKEFIAIIGPSGVGKSTLFKVIINSLKPIKGTAEVLNQDLLKLSKKQKNQMLSKIGFLTQKPNLINTENVYNNITRSISQYKNVFYRIFNILSKEQKINIFTKLDELKILDKAFYKVSELSGGQQQRVEIAKLLVKNVELILADEPTSNLDHQTSLEVITLLKQIAKEKTVLVNIHDLSLVKNNFDRVIAINNKTIVLDKKTEEIEEWELKEIIKNKQ
>NZ_CP007520.1|WP_042733309.1|453406_455158_-|ABC-transporter-permease-subunit
MRTKRDNKKQTVVKQSNFFKYRYINFDTNTTTSWKFHSIYYHIFAFILIAIVAWAFYTHSSGIRFYNFSKTFKQILNILSFGNKNFETAGRASGEYTNLFVDSLKYLWITIKFALVGTFIGFLFALVTAYFSFAKTTNKITSALLSFIILFLRSIPELVFIKLITGSVRNEFSLLFVYIWFTWLWLHKYYFEMLNSIDLEWYINSINHGNSKTRAFFKEIYPRIKNRIVALFIFSFESNIRWASILGALSLPGIGKLIYYASQTASNFDQLAVPLTVLMVFILILELLNYLFKKHLVEAKTKVIKQRNETKIQYYNRLTKKVNFNKWIILSIFLFVFIFSIYTLATTQLSLFDLSSLKEFLRDFFNPDFSKFSFLTKDANFNPILLFWNSFSFSLAAISLCFILTLFLIRVQCLSLNNRIKVMVFRSINVFIRLIPTIVYYYVFLFIFENDLTLLIIAIVLHQSSSQTKQLVEVIDNLDQEIIKNLKMQGYSNNQIFIRYVLPSIKVEYISLLTFYFELIFRSSITYSILTQGRLLIGSNIDHYLDPRFNNGIRIALAYVWLSTFYIIFINLISKLIIKTIKK
>NZ_CP007520.1|WP_042733308.1|452618_453305_-|hypothetical-protein
MKTKPISRNEIFAKEIALINQETKQAGHDGKYSDYIEEVISKLKEIDNQFFTNVLSMTNKEFEESKFYLGKSANDEAINQEIIENIKSQLYLLKELNIQEAIDKKQKVQTNFLDDYKYYFSNLEELHHSTYLKLQQNTNKYKNLELVENNFTKIAKASIKKEVNKTSDNISKKSINELVKECKEMNLKKLSDLDRKKQIYEIKFRWFSILSPIFVLIMVISIILPIYV
>NZ_CP007520.1|WP_042733307.1|451937_452606_-|(d)CMP-kinase
MKKLIVAVDGTSGSGKSVTFKKIADIVDYQFIDTGLMYRALTWFCLDQKIDHTDENQVIKLLDKFDYKVDKDDVFVNNVNVTNSLQNNEIINIINYITPIKEVREFMVKKQRDMVKNGGYIEIGRDITSVVLPNADLKIYLDSSIESRAQRRYDQNIKNNIIGKTYEEIKSDLEKRDHTDKTRSTGPLVLVDDAWYIDNSNLTIDQVVDLVVNKIKQLEREK
>NZ_CP007520.1|WP_042733306.1|450630_451938_-|ribosome-biogenesis-GTPase-Der
MKKGIVAIVGRPNVGKSSLFNRIIREKKSIVEDTPGVTRDRIYGNAEWLTREFIVIDTGGITLKEEQFTREIKVQAEIAMQEADVIVFVLDSQQGITNEDKMVAKMLYKTKKPVVLVANKYDKKQTGVESYEYLSLGFDQAVMVSSTHGIGIGDLLDRVINLMPKNDSNIKDDSTRIAIIGRPNVGKSSLVNSLVGEERMIVSDIAGTTLDAVDTKFKYHHKEYTLIDTAGIRRKSKIYEGIEKYSYLRSLSTINNSDVVLLMIDASKNITDQDTNIGGLAFEEKKPIIIVANKWDLVKNKEEQLLKKEEEIRAYFKYLQYAKIIFISALDKTRISKIIDSIEEIKESLSTKIKTHVLNEVLNRAQLINPAPEHNGGRLKIYYANQVDAYLPTFVLFVNNPNFVHFSYKRFIENQIRLQFGFEGVPINIIFRERK
>NZ_CP007520.1|WP_042733315.1|463644_465861_-|AAA-family-ATPase
MEKQIKLRGYISKFIYLSGNWGLAIFTSEENEKKTIKIKGQIGLMKTKVLYEITGSVNTHAKYGSSFDVVNFDFAQIDNKQQIINFLKSDVFPGVGNLTAKKIAEHYSENFIQEILDDKEKFLSIQGINKSKLEHIYDIIYDINQNNSLTSEFINNKLNLNILEKSQWYVNSQEELINIFTNNFFEFAFQRNLGNIEDIDKIWLHFSKNPYDINRIAYWAFHCCDEILFSTGDSYTNKEALFRKIKEFINIDINENKDLLLSSLLHAKDHNLLVFKENRIYTHNSYYDEQEIALSLDYHLKNNLNNSIDEQTLDKYILEIENEIASSKNIKDFKYDNSQINALKTFAKNNIIIITGGPGTGKTTIIQAIVKLMQKMYKKSKFSISTPTGRAAAKIRENFIESEATTIHRLLEYDGDENRFLINKHNALSFDLLIVDECSMIDNRLFSQFLQSSLKAKKIVLVGDPEQLPSVNYGNVFFDIIKTNTIPTINLEHIHRQKENNGIIDLAYMIKNNTFDITKVDQLNNVKFIFNTDKKYCLEQIKTNYAKDLDFNNPYNTQIICPMYAGTLGINNLNDLIQSNFNFNINDQQKIYQRAKNKYIESDKIMYLKNDSKLNISNGDVGIIDSIIYKNNKFDFAIVNFNNTILEFNNQNFDDLTLSYACSVHKTQGSEYDKVILVLDATHFNQFIDKKLLYTAITRAKKELIIITKEDIFIQGINRSSKKRNTTLQEVIISTLNK
>NZ_CP007520.1|WP_042733316.1|465870_466521_-|hypothetical-protein
MQEQQKQRLLNEIKFQNSRTPIWINFLVQILTVVSLFLVILFLVGGDLQNFNFNYYKKLGKLAYLYLALICLAYLILVTFINWILIWFNVLKSDALSYCLGLAMLCVSIIYTGDLMYNWTVSYTVKSLVRFVIAIVSGLIGVIIGTLLSMLQRNKEYQIEEENKIILLAYQNGEIIPTKKQLRAIKKLEYKYKKEQEELELIEFKNNLYKNKNTNQ
>NZ_CP007520.1|WP_042733317.1|466887_467154_-|30S-ribosomal-protein-S15
MISKQDKLALIKELGGSEKNTGLAEVQIAILTKEIANMTEHLKVHKKDVPTRRSLLKKVAQRRHFLNYLVRKDVNRYKAIIEKLGIRK
>NZ_CP007520.1|WP_042733318.1|467399_468317_+|Fic-family-protein
MYLTIKQTSDKWNLSEQEILDLINQNKIYGFIKENNEYKIPMDLDNPLDLIGVDLLELIDKRMEIIESFTPLEEHELNRINNDFAIEYAYNSNAIEGNTLSLREVYFIFKGMVIDKKPLKDHLDVIGHKQAFEYVLDLTKNKHGLLTEEKIKKIHNLVLIHDWRNAGVYRNVPVVISNSKHDVADVYMIQAKMQQLLDWYYNSNEHIIKKIAKFHLNFKEIHPFIDGNGRTGRLLINFELMKNGYYPIDIKYINRNLYYQAFDDYHTKNDLSTMLNLIANYELLRINYFIRILSDREKLIKQRKE
>NZ_CP007520.1|WP_042733319.1|468358_471277_-|cation-translocating-P-type-ATPase
MTDYKTQSLSEVESSLKTDFKNGLTEAEANLRLTKNGKNALPVKKPTPAVVLFLKALARPIQIVLFIAAIISIIAPLIAKHTLKPHFEDFIDFIVIMFVILLDATLETVQEIRARKSVDALKSLSQPKAIVIRDQISREIDATDLVVGDIVVLEAGKYVPAELRLIETSDCMVDESILTGESLSVEKASNAIKKTKILSDMKNIAFMSTFITSGRAVGVVIETGVNTEIGKISKAVSENEDQTTSLGRKINKFSYLISFIAVVISAFIFLLFLFTGNRDSWASYLMVAITLAIGVIPESLSAIVSITLSFSTKRMVKENVIVKKLESIETLGSVNVICTDKTGTLTQNKMTIEKVIWNNKVINSDEFVNLKANDAKNMFLKALVLPNDSITENGERIGDPTELALVDFAEMMNVDEQKFRKKYKRLDEIPFDSERKLMTTVNSLENNQKVVFTKGALDELLKKCKKIYLDNKIVKLTSDHKKEIKKATSTLSDDALRVLGYAFKIISDDDKNYESDLIFIAATGMIDPVRLEAVQAINEARKAGIKVVMITGDHAITALAIGKALDLAYTPYEVLTSEKLEQFSDQELASAIDNIKIFARVNPEHKVRIVQALQNKGYIVSMTGDGVNDAPSLSKADIGVAMGITGTDVAKQAADAILTDDNFKTIIKGVVEGRNVFQKIRRAIVLLLGFNLANVLSIVLISLFLKVSPFEASNILFINLVVDSCLAFGIGMSPLDNSLILLKPQKKNDGILKDIVWPIFQIGLSLSVAQIISFIIAMSATDMNYWMDQTKTKADNWFLFIQNNRNYFLINPTKLNEFIIFGRTAMFITSVVAPTIFSHLIKLTNWKETRKIDWTVSKPLIVGSSIVLIVSMLAFVIPGVNDTVFGLLSVNKQNHLSWNSNNFWILFTSLACALIPTLFMTITDLIQFYSYHLSSRSWENNQKLIAQLVEQDNKTQVLEQDKKKKQTKSKTN
>NZ_CP007520.1|WP_042733320.1|471283_471871_-|YihA-family-ribosome-biogenesis-GTP-binding-protein
MIKQAVFIKSAADRSGWINDEISEICFVGRSNVGKSSFINSLTNNNKLAKVANTPGKTRLLNFFDINKSQFRLVDAPGYGYAKINDATKIQFAKMMQDYFVNRKNLKGVFMLVDLRHKPTKDDIQMYEFLKYYNIKVVIVGTKLDKLKRNEYSKNEQMIKQTLGFVSSDSFIKISNLNKTNISECYDKINELLEE
>NZ_CP007520.1|WP_042733321.1|471881_472454_-|hypothetical-protein
MISNNISSSLISSIVLYVLILCLSIFIFISNFYLLFQIKVRLKLIKKENLLYLYNHKNYLIVLFNSLFDFVLLIIVSVIFSLYINQNISNKYYVFEICVIIKIINVILLYFLNPKLIKTILVINTTKYLIFSNTLIEMEKIFSIRFENKTFKKVVINYFDQNNNKEQIKLYINKNLEKWFKDNLNKYIKD
>NZ_CP007520.1|WP_042733322.1|472443_473070_-|hypothetical-protein
MDKIIAFIVLLIIYFILLIVMGLLAYLYQIKNQAFINYNKEFFKKWNEYKLKHKHENLNQTTFKFELPVDEIALLEKDFLISVNDKVKVKTKLKKQVKQNLIKDFLYDDYLFLKENVKLKKRVDYQLQQSTIYLTNKRVVINLLDSYFKILITDIKSISVCVIKKNDQFLDSCYLTTNKQEIQITGEVFDFVLTIQKLIRKRDENNDK
>NZ_CP007520.1|WP_042733323.1|473071_473758_-|hypothetical-protein
MSNNHQEVELDFFEPSLGLIIANLDNVLDELNKDNNNYIQLENLINEFENIESLDNWDQLVNKLEKLEDLIINELVNIKDSSVFNLISSLQISKHLAFLLKQNNFVFKQLDELENNSNAMKWNHQQDYIDFYKQVIVEKSNQLLKENKQLFEQLNSKKDEFKKVYNVLISEQVFDDLLEGNKLLIDILKLNINFNDILDLKRLSILNKIQAYLEFINFWQQTINLEEE
>NZ_CP007520.1|WP_042733324.1|473849_474557_+|hypothetical-protein
MIEIYKLKDLNSYDLQAYSHINPWFKNRLNKLILKNKKWILNFNLNPNDYITFDDITEVKLDKVFKEVNNYLNFFKPKIKQIITEKQLFKKFSNSIRNYMMLVGMCHAINTMIDFYKQLDKEVVLNKQQLVYLLANEVLDKKFERYTIEVLKLIPDEYKNNLKDLYSEKIEIHNSFFNSKQFVKWTAKYASRLFNNEKINQKDYLKILYLCYLENDFNRSYISLLQEFVNKLVQE

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Crispr_ID: NZ_CP007520_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP007520_5

462246-462581

Orphan

Consensus_repeat	Method
ACTCATATTTGTAACATTTGAAGTAT	CRISPRCasFinder

4 spacers

The CRISPR arrays of NZ_CP007520_5

>merge|NZ_CP007520|5|462246-462581|CRISPRCasFinder
CTGCATATCATTTACATTTGAAGTGTTTCATTTAGATATATCCTGATTAAATAATCTTGCATTTTGAAACATACCGTTCATATTTTTTACATTTGAAGTATCTCAAGATGAGATATCTTGGTTAAATTCTTTAGCAGCATCAAACATTAAACTCATATCAGTTACTTTTGAAGTATTTCAAGTATTTAATGATTTTCCATCATTATTAAATTTAGATGCTGAACTAAACATATAACTCATATTTGTAACATTTGAAGTATTTCATGATGAGATATCTTTATTAAAGATATTATTATCAGCAAACATTTTACTCATATTTGTTACATTTGAAGTATC

>NZ_CP007520|5|4|462246-462581|CRISPRCasFinder
CTGCATATCATTTACATTTGAAGTGT	TTCATTTAGATATATCCTGATTAAATAATCTTGCATTTTGAAACATACC
GTTCATATTTTTTACATTTGAAGTAT	CTCAAGATGAGATATCTTGGTTAAATTCTTTAGCAGCATCAAACATTAA
ACTCATATCAGTTACTTTTGAAGTAT	TTCAAGTATTTAATGATTTTCCATCATTATTAAATTTAGATGCTGAACTAAACATATA
ACTCATATTTGTAACATTTGAAGTAT	TTCATGATGAGATATCTTTATTAAAGATATTATTATCAGCAAACATTTT
ACTCATATTTGTTACATTTGAAGTATC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007520.1\|WP_042733306.1\|450630_451938_-\|ribosome-biogenesis-GTPase-Der	unknown	unknown	gnl\|CDD\|234628
NZ_CP007520.1\|WP_042733315.1\|463644_465861_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|273632
NZ_CP007520.1\|WP_042733321.1\|471881_472454_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007520.1\|WP_042733311.1\|455870_457220_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|284141
NZ_CP007520.1\|WP_042733313.1\|457956_459303_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007520.1\|WP_042733308.1\|452618_453305_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007520.1\|WP_052491402.1\|459650_461150_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007520.1\|WP_042733320.1\|471283_471871_-\|YihA-family-ribosome-biogenesis-GTP-binding-protein	unknown	unknown	gnl\|CDD\|234770
NZ_CP007520.1\|WP_042733310.1\|455121_455868_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|226164
NZ_CP007520.1\|WP_042733307.1\|451937_452606_-\|(d)CMP-kinase	unknown	unknown	gnl\|CDD\|234579
NZ_CP007520.1\|WP_042733314.1\|461191_461767_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007520.1\|WP_042733318.1\|467399_468317_+\|Fic-family-protein	unknown	unknown	gnl\|CDD\|225718
NZ_CP007520.1\|WP_042733322.1\|472443_473070_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007520.1\|WP_042733309.1\|453406_455158_-\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|226165
NZ_CP007520.1\|WP_042733323.1\|473071_473758_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007520.1\|WP_042733324.1\|473849_474557_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|234767
NZ_CP007520.1\|WP_042733317.1\|466887_467154_-\|30S-ribosomal-protein-S15	unknown	unknown	gnl\|CDD\|180170
NZ_CP007520.1\|WP_042733316.1\|465870_466521_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007520.1\|WP_042733319.1\|468358_471277_-\|cation-translocating-P-type-ATPase	unknown	unknown	gnl\|CDD\|319781
NZ_CP007520.1\|WP_042733312.1\|457475_457829_-\|membrane-protein	unknown	unknown	gnl\|CDD\|275347

Protein	Function_ID	Function_description	E-value
NZ_CP007520.1\|WP_042733306.1\|450630_451938_-\|ribosome-biogenesis-GTPase-Der	gnl\|CDD\|234628	PRK00093, PRK00093, GTP-binding protein Der; Reviewed.	0
NZ_CP007520.1\|WP_042733315.1\|463644_465861_-\|AAA-family-ATPase	gnl\|CDD\|273632	TIGR01448, recD_rel, helicase, putative, RecD/TraA family. This model describes a family similar to RecD, the exodeoxyribonuclease V alpha chain of TIGR01447. Members of this family, however, are not found in a context of RecB and RecC and are longer by about 200 amino acids at the amino end. Chlamydia muridarum has both a member of this family and a RecD. [Unknown function, Enzymes of unknown specificity].	3.92628e-117
NZ_CP007520.1\|WP_042733317.1\|466887_467154_-\|30S-ribosomal-protein-S15	gnl\|CDD\|180170	PRK05626, rpsO, 30S ribosomal protein S15; Reviewed.	1.03639e-40
NZ_CP007520.1\|WP_042733311.1\|455870_457220_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|284141	pfam06646, Mycoplasma_p37, High affinity transport system protein p37. This family consists of several high affinity transport system protein p37 sequences which are specific to Mycoplasma species. The p37 gene is part of an operon encoding two additional proteins which are highly similar to components of the periplasmic binding-protein-dependent transport systems of Gram-negative bacteria.It has been suggested that p37 is part of a homologous, high-affinity transport system in M. hyorhinis, a Gram-positive bacterium.	4.77884e-29
NZ_CP007520.1\|WP_042733310.1\|455121_455868_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|226164	COG3638, COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism].	2.77167e-77
NZ_CP007520.1\|WP_042733307.1\|451937_452606_-\|(d)CMP-kinase	gnl\|CDD\|234579	PRK00023, cmk, (d)CMP kinase.	7.76458e-81
NZ_CP007520.1\|WP_042733320.1\|471283_471871_-\|YihA-family-ribosome-biogenesis-GTP-binding-protein	gnl\|CDD\|234770	PRK00454, engB, GTP-binding protein YsxC; Reviewed.	7.20878e-92
NZ_CP007520.1\|WP_042733309.1\|453406_455158_-\|ABC-transporter-permease-subunit	gnl\|CDD\|226165	COG3639, COG3639, ABC-type phosphate/phosphonate transport system, permease component [Inorganic ion transport and metabolism].	6.97169e-21
NZ_CP007520.1\|WP_042733324.1\|473849_474557_+\|hypothetical-protein	gnl\|CDD\|234767	PRK00448, polC, DNA polymerase III PolC; Validated.	0.00131657
NZ_CP007520.1\|WP_042733318.1\|467399_468317_+\|Fic-family-protein	gnl\|CDD\|225718	COG3177, COG3177, Fic family protein [Function unknown].	3.95483e-25
NZ_CP007520.1\|WP_042733319.1\|468358_471277_-\|cation-translocating-P-type-ATPase	gnl\|CDD\|319781	cd02089, P-type_ATPase_Ca_prok, prokaryotic P-type Ca(2+)-ATPase similar to Synechococcus elongatus sp. strain PCC 7942 PacL and Listeria monocytogenes LMCA1. Ca(2+) transport ATPase is a plasma membrane protein which pumps Ca(2+) ion out of the cytoplasm. This prokaryotic subfamily includes the Ca(2+)-ATPase Synechococcus elongatus PacL, Listeria monocytogenes Ca(2+)-ATPase 1 (LMCA1) which has a low Ca(2+) affinity and a high pH optimum (pH about 9) and may remove Ca(2+) from the microorganism in environmental conditions when e.g. stressed by high Ca(2+) and alkaline pH, and the Bacillus subtilis putative P-type Ca(2+)-transport ATPase encoded by the yloB gene, which is expressed during sporulation. This subfamily belongs to the P-type ATPases, a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	0
NZ_CP007520.1\|WP_042733312.1\|457475_457829_-\|membrane-protein	gnl\|CDD\|275347	TIGR04554, hypothetical_protein_MMCAP2_0629, three transmembrane helix protein. Members of this rare family are small, highly hydrophobic, and restricted so far to the genus Mycoplasma, where it appears not be be essential. All members have three hydrophobic transmembrane helical segments.	2.33149e-38

>NZ_CP007520.1|WP_042733314.1|461191_461767_+|hypothetical-protein
MNYKSHKFLKYLATIGSVILSISLLIIYLQKGQDNKKIFNSLQPYIALEIILLILGSLFLISYMFIRWKWKNKSDYKYTKKDIIYLITGFSLYSSTILITTIYFVLSLLINDQNSIKILFYVLLPITFLLMIVASIFETLSRINEQLFLYKKEYEKIEKENETKIKVDFTKTKNNNESQIKLDDPENPFKD
>NZ_CP007520.1|WP_052491402.1|459650_461150_+|hypothetical-protein
MKKISRYLWILILLIVGVFAAQTYLNKSYNVPDLTGKTDYRSNYNRKYGLMWGGHALRYYLYRNSSAYDTNKTEYENFIKNIEEQTLNINFLNSKQSIVQRQDFKYSLISSVMVTSEYGSTSAQEFFAESFSKYVSSNDNQKNVTWYLLEHFFTKTFKQLKNNFSGGITNTDKWIKIKDLIDNDANKVSKEIKYDINLDPNKQNLNPSDLGYTNVINGNRYIYGFFNRRYVTDTITNLGKQIFSPDFEFNNYAISRIGQQKFGTYAKKLMSSTLYNPYQKIQHTKQTKNKWSNIDQLDEYWKDISKFKTKNGKQESSIQIKKNLDAAYEDEKDFKKDDLYEETLKLFNIIYKIAGDDFRKIFINLILTNDKKIKGIGDATGVNGITSTQSLTDDSTTVYSFIIIRDKSFKSKENQHQFNWSWFSSNNRFQTLHHEFGHVLDAYLSKDNSFSELFDEDDYKLTQQGRLYAGDTPVKDVYALVDKKKALRFGHMSGCKCCC
>NZ_CP007520.1|WP_042733313.1|457956_459303_-|hypothetical-protein
MSSKKLKDFMTNTILEKINYYTSKKFDLNTIKEMLAIDLIDIEDDLITLVDKYIMYVIWLENNHKDKSNAFIKFLNKLDNSKKQVIDQTNRIQKQQDNLVEYEHRKQDQEKIDHYLSKIFNKYKTNIDQHNSSLNTYHQQKVQNQIKDDQHIETNQQFTPNLENQLDNSLIDSEIKTKDLIIDNKDLIANNLQVETDLSIIENTINLDSESEIKIENKTQVDDKLDSYSTDDKISDDEEKIGDYYKNIWTLSEQNNQDEEIDLNDDLTDNQELEFAKTIDDINSDLITHDPDEFATSTVNWSDYTDNSNTEEEITSKEDYFEIEEEITANNDFEIEDLTDNQELELAKTIDDINGDLITHVPEDFATSTVNWSNYTDNQDQTIKDQEEVLELTHSPKLGEKINYKDKNYSVVGMSIKKDENGKDKPVIKLVSNDGSEQTTDITFIKKY
>NZ_CP007520.1|WP_042733312.1|457475_457829_-|membrane-protein
MNTLLVTAEIFGKDIKPVAIIALLLSLLVFGIFSFLVYKNKVKIVEQKSTVIVAINYIIAFIALVLSSVAISKYNSPGLGDLFSNNLPATLRGLAYSGLVFSLIASGMTGYLYSKWK
>NZ_CP007520.1|WP_042733311.1|455870_457220_-|ABC-transporter-substrate-binding-protein
MKTNKLKMMLAMTGAVTAGSIVPFAVSCTKTSGWQEIITIKNAWVNEGFLNTEKETKFLETLENKFESFKNQDDSLKNFKKVKFKIGVDGAKKAYLSKLEKDTEGDDVLITNYSYYLNGLFDPVKNEVKSDLPFQLVSQASTLRFTWQDNINEMYNKANGNKNDKIVADAVKNNQKWIDETGKEYPEWNTIEKTDKKPDGTLTFDGSKYTNFYEKDKLSYVYRGAILISGKKAEREKITQQWNSKDFDEFIKNGIVYEKDSSAGSFKYQAALIARHFNKDLTEVTKILKGEVEKYKKHIFKGVGAAKQLGKEVAVGAEKIIPRIGFDDEGAYNWTQSNPEKSKYQPKGFEKNKNVKDENYDNDVVRTLTFTNPAGYDVVLARKGLMTKQVELLSKALTSLTLDENTYGIYTGYNKFQNLTEEMFNNFIKLQAQAETTKDLVTKIDEAKL
>NZ_CP007520.1|WP_042733310.1|455121_455868_-|ATP-binding-cassette-domain-containing-protein
MNKIIDLKNITVCYNNKKEPVLDNINLEINKKEFIAIIGPSGVGKSTLFKVIINSLKPIKGTAEVLNQDLLKLSKKQKNQMLSKIGFLTQKPNLINTENVYNNITRSISQYKNVFYRIFNILSKEQKINIFTKLDELKILDKAFYKVSELSGGQQQRVEIAKLLVKNVELILADEPTSNLDHQTSLEVITLLKQIAKEKTVLVNIHDLSLVKNNFDRVIAINNKTIVLDKKTEEIEEWELKEIIKNKQ
>NZ_CP007520.1|WP_042733309.1|453406_455158_-|ABC-transporter-permease-subunit
MRTKRDNKKQTVVKQSNFFKYRYINFDTNTTTSWKFHSIYYHIFAFILIAIVAWAFYTHSSGIRFYNFSKTFKQILNILSFGNKNFETAGRASGEYTNLFVDSLKYLWITIKFALVGTFIGFLFALVTAYFSFAKTTNKITSALLSFIILFLRSIPELVFIKLITGSVRNEFSLLFVYIWFTWLWLHKYYFEMLNSIDLEWYINSINHGNSKTRAFFKEIYPRIKNRIVALFIFSFESNIRWASILGALSLPGIGKLIYYASQTASNFDQLAVPLTVLMVFILILELLNYLFKKHLVEAKTKVIKQRNETKIQYYNRLTKKVNFNKWIILSIFLFVFIFSIYTLATTQLSLFDLSSLKEFLRDFFNPDFSKFSFLTKDANFNPILLFWNSFSFSLAAISLCFILTLFLIRVQCLSLNNRIKVMVFRSINVFIRLIPTIVYYYVFLFIFENDLTLLIIAIVLHQSSSQTKQLVEVIDNLDQEIIKNLKMQGYSNNQIFIRYVLPSIKVEYISLLTFYFELIFRSSITYSILTQGRLLIGSNIDHYLDPRFNNGIRIALAYVWLSTFYIIFINLISKLIIKTIKK
>NZ_CP007520.1|WP_042733308.1|452618_453305_-|hypothetical-protein
MKTKPISRNEIFAKEIALINQETKQAGHDGKYSDYIEEVISKLKEIDNQFFTNVLSMTNKEFEESKFYLGKSANDEAINQEIIENIKSQLYLLKELNIQEAIDKKQKVQTNFLDDYKYYFSNLEELHHSTYLKLQQNTNKYKNLELVENNFTKIAKASIKKEVNKTSDNISKKSINELVKECKEMNLKKLSDLDRKKQIYEIKFRWFSILSPIFVLIMVISIILPIYV
>NZ_CP007520.1|WP_042733307.1|451937_452606_-|(d)CMP-kinase
MKKLIVAVDGTSGSGKSVTFKKIADIVDYQFIDTGLMYRALTWFCLDQKIDHTDENQVIKLLDKFDYKVDKDDVFVNNVNVTNSLQNNEIINIINYITPIKEVREFMVKKQRDMVKNGGYIEIGRDITSVVLPNADLKIYLDSSIESRAQRRYDQNIKNNIIGKTYEEIKSDLEKRDHTDKTRSTGPLVLVDDAWYIDNSNLTIDQVVDLVVNKIKQLEREK
>NZ_CP007520.1|WP_042733306.1|450630_451938_-|ribosome-biogenesis-GTPase-Der
MKKGIVAIVGRPNVGKSSLFNRIIREKKSIVEDTPGVTRDRIYGNAEWLTREFIVIDTGGITLKEEQFTREIKVQAEIAMQEADVIVFVLDSQQGITNEDKMVAKMLYKTKKPVVLVANKYDKKQTGVESYEYLSLGFDQAVMVSSTHGIGIGDLLDRVINLMPKNDSNIKDDSTRIAIIGRPNVGKSSLVNSLVGEERMIVSDIAGTTLDAVDTKFKYHHKEYTLIDTAGIRRKSKIYEGIEKYSYLRSLSTINNSDVVLLMIDASKNITDQDTNIGGLAFEEKKPIIIVANKWDLVKNKEEQLLKKEEEIRAYFKYLQYAKIIFISALDKTRISKIIDSIEEIKESLSTKIKTHVLNEVLNRAQLINPAPEHNGGRLKIYYANQVDAYLPTFVLFVNNPNFVHFSYKRFIENQIRLQFGFEGVPINIIFRERK
>NZ_CP007520.1|WP_042733315.1|463644_465861_-|AAA-family-ATPase
MEKQIKLRGYISKFIYLSGNWGLAIFTSEENEKKTIKIKGQIGLMKTKVLYEITGSVNTHAKYGSSFDVVNFDFAQIDNKQQIINFLKSDVFPGVGNLTAKKIAEHYSENFIQEILDDKEKFLSIQGINKSKLEHIYDIIYDINQNNSLTSEFINNKLNLNILEKSQWYVNSQEELINIFTNNFFEFAFQRNLGNIEDIDKIWLHFSKNPYDINRIAYWAFHCCDEILFSTGDSYTNKEALFRKIKEFINIDINENKDLLLSSLLHAKDHNLLVFKENRIYTHNSYYDEQEIALSLDYHLKNNLNNSIDEQTLDKYILEIENEIASSKNIKDFKYDNSQINALKTFAKNNIIIITGGPGTGKTTIIQAIVKLMQKMYKKSKFSISTPTGRAAAKIRENFIESEATTIHRLLEYDGDENRFLINKHNALSFDLLIVDECSMIDNRLFSQFLQSSLKAKKIVLVGDPEQLPSVNYGNVFFDIIKTNTIPTINLEHIHRQKENNGIIDLAYMIKNNTFDITKVDQLNNVKFIFNTDKKYCLEQIKTNYAKDLDFNNPYNTQIICPMYAGTLGINNLNDLIQSNFNFNINDQQKIYQRAKNKYIESDKIMYLKNDSKLNISNGDVGIIDSIIYKNNKFDFAIVNFNNTILEFNNQNFDDLTLSYACSVHKTQGSEYDKVILVLDATHFNQFIDKKLLYTAITRAKKELIIITKEDIFIQGINRSSKKRNTTLQEVIISTLNK
>NZ_CP007520.1|WP_042733316.1|465870_466521_-|hypothetical-protein
MQEQQKQRLLNEIKFQNSRTPIWINFLVQILTVVSLFLVILFLVGGDLQNFNFNYYKKLGKLAYLYLALICLAYLILVTFINWILIWFNVLKSDALSYCLGLAMLCVSIIYTGDLMYNWTVSYTVKSLVRFVIAIVSGLIGVIIGTLLSMLQRNKEYQIEEENKIILLAYQNGEIIPTKKQLRAIKKLEYKYKKEQEELELIEFKNNLYKNKNTNQ
>NZ_CP007520.1|WP_042733317.1|466887_467154_-|30S-ribosomal-protein-S15
MISKQDKLALIKELGGSEKNTGLAEVQIAILTKEIANMTEHLKVHKKDVPTRRSLLKKVAQRRHFLNYLVRKDVNRYKAIIEKLGIRK
>NZ_CP007520.1|WP_042733318.1|467399_468317_+|Fic-family-protein
MYLTIKQTSDKWNLSEQEILDLINQNKIYGFIKENNEYKIPMDLDNPLDLIGVDLLELIDKRMEIIESFTPLEEHELNRINNDFAIEYAYNSNAIEGNTLSLREVYFIFKGMVIDKKPLKDHLDVIGHKQAFEYVLDLTKNKHGLLTEEKIKKIHNLVLIHDWRNAGVYRNVPVVISNSKHDVADVYMIQAKMQQLLDWYYNSNEHIIKKIAKFHLNFKEIHPFIDGNGRTGRLLINFELMKNGYYPIDIKYINRNLYYQAFDDYHTKNDLSTMLNLIANYELLRINYFIRILSDREKLIKQRKE
>NZ_CP007520.1|WP_042733319.1|468358_471277_-|cation-translocating-P-type-ATPase
MTDYKTQSLSEVESSLKTDFKNGLTEAEANLRLTKNGKNALPVKKPTPAVVLFLKALARPIQIVLFIAAIISIIAPLIAKHTLKPHFEDFIDFIVIMFVILLDATLETVQEIRARKSVDALKSLSQPKAIVIRDQISREIDATDLVVGDIVVLEAGKYVPAELRLIETSDCMVDESILTGESLSVEKASNAIKKTKILSDMKNIAFMSTFITSGRAVGVVIETGVNTEIGKISKAVSENEDQTTSLGRKINKFSYLISFIAVVISAFIFLLFLFTGNRDSWASYLMVAITLAIGVIPESLSAIVSITLSFSTKRMVKENVIVKKLESIETLGSVNVICTDKTGTLTQNKMTIEKVIWNNKVINSDEFVNLKANDAKNMFLKALVLPNDSITENGERIGDPTELALVDFAEMMNVDEQKFRKKYKRLDEIPFDSERKLMTTVNSLENNQKVVFTKGALDELLKKCKKIYLDNKIVKLTSDHKKEIKKATSTLSDDALRVLGYAFKIISDDDKNYESDLIFIAATGMIDPVRLEAVQAINEARKAGIKVVMITGDHAITALAIGKALDLAYTPYEVLTSEKLEQFSDQELASAIDNIKIFARVNPEHKVRIVQALQNKGYIVSMTGDGVNDAPSLSKADIGVAMGITGTDVAKQAADAILTDDNFKTIIKGVVEGRNVFQKIRRAIVLLLGFNLANVLSIVLISLFLKVSPFEASNILFINLVVDSCLAFGIGMSPLDNSLILLKPQKKNDGILKDIVWPIFQIGLSLSVAQIISFIIAMSATDMNYWMDQTKTKADNWFLFIQNNRNYFLINPTKLNEFIIFGRTAMFITSVVAPTIFSHLIKLTNWKETRKIDWTVSKPLIVGSSIVLIVSMLAFVIPGVNDTVFGLLSVNKQNHLSWNSNNFWILFTSLACALIPTLFMTITDLIQFYSYHLSSRSWENNQKLIAQLVEQDNKTQVLEQDKKKKQTKSKTN
>NZ_CP007520.1|WP_042733320.1|471283_471871_-|YihA-family-ribosome-biogenesis-GTP-binding-protein
MIKQAVFIKSAADRSGWINDEISEICFVGRSNVGKSSFINSLTNNNKLAKVANTPGKTRLLNFFDINKSQFRLVDAPGYGYAKINDATKIQFAKMMQDYFVNRKNLKGVFMLVDLRHKPTKDDIQMYEFLKYYNIKVVIVGTKLDKLKRNEYSKNEQMIKQTLGFVSSDSFIKISNLNKTNISECYDKINELLEE
>NZ_CP007520.1|WP_042733321.1|471881_472454_-|hypothetical-protein
MISNNISSSLISSIVLYVLILCLSIFIFISNFYLLFQIKVRLKLIKKENLLYLYNHKNYLIVLFNSLFDFVLLIIVSVIFSLYINQNISNKYYVFEICVIIKIINVILLYFLNPKLIKTILVINTTKYLIFSNTLIEMEKIFSIRFENKTFKKVVINYFDQNNNKEQIKLYINKNLEKWFKDNLNKYIKD
>NZ_CP007520.1|WP_042733322.1|472443_473070_-|hypothetical-protein
MDKIIAFIVLLIIYFILLIVMGLLAYLYQIKNQAFINYNKEFFKKWNEYKLKHKHENLNQTTFKFELPVDEIALLEKDFLISVNDKVKVKTKLKKQVKQNLIKDFLYDDYLFLKENVKLKKRVDYQLQQSTIYLTNKRVVINLLDSYFKILITDIKSISVCVIKKNDQFLDSCYLTTNKQEIQITGEVFDFVLTIQKLIRKRDENNDK
>NZ_CP007520.1|WP_042733323.1|473071_473758_-|hypothetical-protein
MSNNHQEVELDFFEPSLGLIIANLDNVLDELNKDNNNYIQLENLINEFENIESLDNWDQLVNKLEKLEDLIINELVNIKDSSVFNLISSLQISKHLAFLLKQNNFVFKQLDELENNSNAMKWNHQQDYIDFYKQVIVEKSNQLLKENKQLFEQLNSKKDEFKKVYNVLISEQVFDDLLEGNKLLIDILKLNINFNDILDLKRLSILNKIQAYLEFINFWQQTINLEEE
>NZ_CP007520.1|WP_042733324.1|473849_474557_+|hypothetical-protein
MIEIYKLKDLNSYDLQAYSHINPWFKNRLNKLILKNKKWILNFNLNPNDYITFDDITEVKLDKVFKEVNNYLNFFKPKIKQIITEKQLFKKFSNSIRNYMMLVGMCHAINTMIDFYKQLDKEVVLNKQQLVYLLANEVLDKKFERYTIEVLKLIPDEYKNNLKDLYSEKIEIHNSFFNSKQFVKWTAKYASRLFNNEKINQKDYLKILYLCYLENDFNRSYISLLQEFVNKLVQE

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Crispr_ID: NZ_CP007520_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP007520_7

462891-462991

Orphan

Consensus_repeat	Method
ACTCATATTTGTAACATTTGAAGTAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP007520_7

>merge|NZ_CP007520|7|462891-462991|CRISPRCasFinder
ACTCATATCAGTTACTTTTTCAGTGTTTCAATTAGAAATATCACCATCAAAAACTTTGGTATTAGCAAACATTTTACTCATACTAGTTACATTTGAAACAT

>NZ_CP007520|7|6|462891-462991|CRISPRCasFinder
ACTCATATCAGTTACTTTTTCAGTGT	TTCAATTAGAAATATCACCATCAAAAACTTTGGTATTAGCAAACATTTT
ACTCATACTAGTTACATTTGAAACAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007520.1\|WP_042733306.1\|450630_451938_-\|ribosome-biogenesis-GTPase-Der	unknown	unknown	gnl\|CDD\|234628
NZ_CP007520.1\|WP_042733315.1\|463644_465861_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|273632
NZ_CP007520.1\|WP_042733321.1\|471881_472454_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007520.1\|WP_042733311.1\|455870_457220_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|284141
NZ_CP007520.1\|WP_042733313.1\|457956_459303_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007520.1\|WP_042733308.1\|452618_453305_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007520.1\|WP_052491402.1\|459650_461150_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007520.1\|WP_042733320.1\|471283_471871_-\|YihA-family-ribosome-biogenesis-GTP-binding-protein	unknown	unknown	gnl\|CDD\|234770
NZ_CP007520.1\|WP_042733310.1\|455121_455868_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|226164
NZ_CP007520.1\|WP_042733307.1\|451937_452606_-\|(d)CMP-kinase	unknown	unknown	gnl\|CDD\|234579
NZ_CP007520.1\|WP_042733314.1\|461191_461767_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007520.1\|WP_042733318.1\|467399_468317_+\|Fic-family-protein	unknown	unknown	gnl\|CDD\|225718
NZ_CP007520.1\|WP_042733322.1\|472443_473070_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007520.1\|WP_042733309.1\|453406_455158_-\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|226165
NZ_CP007520.1\|WP_042733323.1\|473071_473758_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007520.1\|WP_042733324.1\|473849_474557_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|234767
NZ_CP007520.1\|WP_042733317.1\|466887_467154_-\|30S-ribosomal-protein-S15	unknown	unknown	gnl\|CDD\|180170
NZ_CP007520.1\|WP_042733316.1\|465870_466521_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007520.1\|WP_042733319.1\|468358_471277_-\|cation-translocating-P-type-ATPase	unknown	unknown	gnl\|CDD\|319781
NZ_CP007520.1\|WP_042733312.1\|457475_457829_-\|membrane-protein	unknown	unknown	gnl\|CDD\|275347

Protein	Function_ID	Function_description	E-value
NZ_CP007520.1\|WP_042733306.1\|450630_451938_-\|ribosome-biogenesis-GTPase-Der	gnl\|CDD\|234628	PRK00093, PRK00093, GTP-binding protein Der; Reviewed.	0
NZ_CP007520.1\|WP_042733315.1\|463644_465861_-\|AAA-family-ATPase	gnl\|CDD\|273632	TIGR01448, recD_rel, helicase, putative, RecD/TraA family. This model describes a family similar to RecD, the exodeoxyribonuclease V alpha chain of TIGR01447. Members of this family, however, are not found in a context of RecB and RecC and are longer by about 200 amino acids at the amino end. Chlamydia muridarum has both a member of this family and a RecD. [Unknown function, Enzymes of unknown specificity].	3.92628e-117
NZ_CP007520.1\|WP_042733317.1\|466887_467154_-\|30S-ribosomal-protein-S15	gnl\|CDD\|180170	PRK05626, rpsO, 30S ribosomal protein S15; Reviewed.	1.03639e-40
NZ_CP007520.1\|WP_042733311.1\|455870_457220_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|284141	pfam06646, Mycoplasma_p37, High affinity transport system protein p37. This family consists of several high affinity transport system protein p37 sequences which are specific to Mycoplasma species. The p37 gene is part of an operon encoding two additional proteins which are highly similar to components of the periplasmic binding-protein-dependent transport systems of Gram-negative bacteria.It has been suggested that p37 is part of a homologous, high-affinity transport system in M. hyorhinis, a Gram-positive bacterium.	4.77884e-29
NZ_CP007520.1\|WP_042733310.1\|455121_455868_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|226164	COG3638, COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism].	2.77167e-77
NZ_CP007520.1\|WP_042733307.1\|451937_452606_-\|(d)CMP-kinase	gnl\|CDD\|234579	PRK00023, cmk, (d)CMP kinase.	7.76458e-81
NZ_CP007520.1\|WP_042733320.1\|471283_471871_-\|YihA-family-ribosome-biogenesis-GTP-binding-protein	gnl\|CDD\|234770	PRK00454, engB, GTP-binding protein YsxC; Reviewed.	7.20878e-92
NZ_CP007520.1\|WP_042733309.1\|453406_455158_-\|ABC-transporter-permease-subunit	gnl\|CDD\|226165	COG3639, COG3639, ABC-type phosphate/phosphonate transport system, permease component [Inorganic ion transport and metabolism].	6.97169e-21
NZ_CP007520.1\|WP_042733324.1\|473849_474557_+\|hypothetical-protein	gnl\|CDD\|234767	PRK00448, polC, DNA polymerase III PolC; Validated.	0.00131657
NZ_CP007520.1\|WP_042733318.1\|467399_468317_+\|Fic-family-protein	gnl\|CDD\|225718	COG3177, COG3177, Fic family protein [Function unknown].	3.95483e-25
NZ_CP007520.1\|WP_042733319.1\|468358_471277_-\|cation-translocating-P-type-ATPase	gnl\|CDD\|319781	cd02089, P-type_ATPase_Ca_prok, prokaryotic P-type Ca(2+)-ATPase similar to Synechococcus elongatus sp. strain PCC 7942 PacL and Listeria monocytogenes LMCA1. Ca(2+) transport ATPase is a plasma membrane protein which pumps Ca(2+) ion out of the cytoplasm. This prokaryotic subfamily includes the Ca(2+)-ATPase Synechococcus elongatus PacL, Listeria monocytogenes Ca(2+)-ATPase 1 (LMCA1) which has a low Ca(2+) affinity and a high pH optimum (pH about 9) and may remove Ca(2+) from the microorganism in environmental conditions when e.g. stressed by high Ca(2+) and alkaline pH, and the Bacillus subtilis putative P-type Ca(2+)-transport ATPase encoded by the yloB gene, which is expressed during sporulation. This subfamily belongs to the P-type ATPases, a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	0
NZ_CP007520.1\|WP_042733312.1\|457475_457829_-\|membrane-protein	gnl\|CDD\|275347	TIGR04554, hypothetical_protein_MMCAP2_0629, three transmembrane helix protein. Members of this rare family are small, highly hydrophobic, and restricted so far to the genus Mycoplasma, where it appears not be be essential. All members have three hydrophobic transmembrane helical segments.	2.33149e-38

>NZ_CP007520.1|WP_042733314.1|461191_461767_+|hypothetical-protein
MNYKSHKFLKYLATIGSVILSISLLIIYLQKGQDNKKIFNSLQPYIALEIILLILGSLFLISYMFIRWKWKNKSDYKYTKKDIIYLITGFSLYSSTILITTIYFVLSLLINDQNSIKILFYVLLPITFLLMIVASIFETLSRINEQLFLYKKEYEKIEKENETKIKVDFTKTKNNNESQIKLDDPENPFKD
>NZ_CP007520.1|WP_052491402.1|459650_461150_+|hypothetical-protein
MKKISRYLWILILLIVGVFAAQTYLNKSYNVPDLTGKTDYRSNYNRKYGLMWGGHALRYYLYRNSSAYDTNKTEYENFIKNIEEQTLNINFLNSKQSIVQRQDFKYSLISSVMVTSEYGSTSAQEFFAESFSKYVSSNDNQKNVTWYLLEHFFTKTFKQLKNNFSGGITNTDKWIKIKDLIDNDANKVSKEIKYDINLDPNKQNLNPSDLGYTNVINGNRYIYGFFNRRYVTDTITNLGKQIFSPDFEFNNYAISRIGQQKFGTYAKKLMSSTLYNPYQKIQHTKQTKNKWSNIDQLDEYWKDISKFKTKNGKQESSIQIKKNLDAAYEDEKDFKKDDLYEETLKLFNIIYKIAGDDFRKIFINLILTNDKKIKGIGDATGVNGITSTQSLTDDSTTVYSFIIIRDKSFKSKENQHQFNWSWFSSNNRFQTLHHEFGHVLDAYLSKDNSFSELFDEDDYKLTQQGRLYAGDTPVKDVYALVDKKKALRFGHMSGCKCCC
>NZ_CP007520.1|WP_042733313.1|457956_459303_-|hypothetical-protein
MSSKKLKDFMTNTILEKINYYTSKKFDLNTIKEMLAIDLIDIEDDLITLVDKYIMYVIWLENNHKDKSNAFIKFLNKLDNSKKQVIDQTNRIQKQQDNLVEYEHRKQDQEKIDHYLSKIFNKYKTNIDQHNSSLNTYHQQKVQNQIKDDQHIETNQQFTPNLENQLDNSLIDSEIKTKDLIIDNKDLIANNLQVETDLSIIENTINLDSESEIKIENKTQVDDKLDSYSTDDKISDDEEKIGDYYKNIWTLSEQNNQDEEIDLNDDLTDNQELEFAKTIDDINSDLITHDPDEFATSTVNWSDYTDNSNTEEEITSKEDYFEIEEEITANNDFEIEDLTDNQELELAKTIDDINGDLITHVPEDFATSTVNWSNYTDNQDQTIKDQEEVLELTHSPKLGEKINYKDKNYSVVGMSIKKDENGKDKPVIKLVSNDGSEQTTDITFIKKY
>NZ_CP007520.1|WP_042733312.1|457475_457829_-|membrane-protein
MNTLLVTAEIFGKDIKPVAIIALLLSLLVFGIFSFLVYKNKVKIVEQKSTVIVAINYIIAFIALVLSSVAISKYNSPGLGDLFSNNLPATLRGLAYSGLVFSLIASGMTGYLYSKWK
>NZ_CP007520.1|WP_042733311.1|455870_457220_-|ABC-transporter-substrate-binding-protein
MKTNKLKMMLAMTGAVTAGSIVPFAVSCTKTSGWQEIITIKNAWVNEGFLNTEKETKFLETLENKFESFKNQDDSLKNFKKVKFKIGVDGAKKAYLSKLEKDTEGDDVLITNYSYYLNGLFDPVKNEVKSDLPFQLVSQASTLRFTWQDNINEMYNKANGNKNDKIVADAVKNNQKWIDETGKEYPEWNTIEKTDKKPDGTLTFDGSKYTNFYEKDKLSYVYRGAILISGKKAEREKITQQWNSKDFDEFIKNGIVYEKDSSAGSFKYQAALIARHFNKDLTEVTKILKGEVEKYKKHIFKGVGAAKQLGKEVAVGAEKIIPRIGFDDEGAYNWTQSNPEKSKYQPKGFEKNKNVKDENYDNDVVRTLTFTNPAGYDVVLARKGLMTKQVELLSKALTSLTLDENTYGIYTGYNKFQNLTEEMFNNFIKLQAQAETTKDLVTKIDEAKL
>NZ_CP007520.1|WP_042733310.1|455121_455868_-|ATP-binding-cassette-domain-containing-protein
MNKIIDLKNITVCYNNKKEPVLDNINLEINKKEFIAIIGPSGVGKSTLFKVIINSLKPIKGTAEVLNQDLLKLSKKQKNQMLSKIGFLTQKPNLINTENVYNNITRSISQYKNVFYRIFNILSKEQKINIFTKLDELKILDKAFYKVSELSGGQQQRVEIAKLLVKNVELILADEPTSNLDHQTSLEVITLLKQIAKEKTVLVNIHDLSLVKNNFDRVIAINNKTIVLDKKTEEIEEWELKEIIKNKQ
>NZ_CP007520.1|WP_042733309.1|453406_455158_-|ABC-transporter-permease-subunit
MRTKRDNKKQTVVKQSNFFKYRYINFDTNTTTSWKFHSIYYHIFAFILIAIVAWAFYTHSSGIRFYNFSKTFKQILNILSFGNKNFETAGRASGEYTNLFVDSLKYLWITIKFALVGTFIGFLFALVTAYFSFAKTTNKITSALLSFIILFLRSIPELVFIKLITGSVRNEFSLLFVYIWFTWLWLHKYYFEMLNSIDLEWYINSINHGNSKTRAFFKEIYPRIKNRIVALFIFSFESNIRWASILGALSLPGIGKLIYYASQTASNFDQLAVPLTVLMVFILILELLNYLFKKHLVEAKTKVIKQRNETKIQYYNRLTKKVNFNKWIILSIFLFVFIFSIYTLATTQLSLFDLSSLKEFLRDFFNPDFSKFSFLTKDANFNPILLFWNSFSFSLAAISLCFILTLFLIRVQCLSLNNRIKVMVFRSINVFIRLIPTIVYYYVFLFIFENDLTLLIIAIVLHQSSSQTKQLVEVIDNLDQEIIKNLKMQGYSNNQIFIRYVLPSIKVEYISLLTFYFELIFRSSITYSILTQGRLLIGSNIDHYLDPRFNNGIRIALAYVWLSTFYIIFINLISKLIIKTIKK
>NZ_CP007520.1|WP_042733308.1|452618_453305_-|hypothetical-protein
MKTKPISRNEIFAKEIALINQETKQAGHDGKYSDYIEEVISKLKEIDNQFFTNVLSMTNKEFEESKFYLGKSANDEAINQEIIENIKSQLYLLKELNIQEAIDKKQKVQTNFLDDYKYYFSNLEELHHSTYLKLQQNTNKYKNLELVENNFTKIAKASIKKEVNKTSDNISKKSINELVKECKEMNLKKLSDLDRKKQIYEIKFRWFSILSPIFVLIMVISIILPIYV
>NZ_CP007520.1|WP_042733307.1|451937_452606_-|(d)CMP-kinase
MKKLIVAVDGTSGSGKSVTFKKIADIVDYQFIDTGLMYRALTWFCLDQKIDHTDENQVIKLLDKFDYKVDKDDVFVNNVNVTNSLQNNEIINIINYITPIKEVREFMVKKQRDMVKNGGYIEIGRDITSVVLPNADLKIYLDSSIESRAQRRYDQNIKNNIIGKTYEEIKSDLEKRDHTDKTRSTGPLVLVDDAWYIDNSNLTIDQVVDLVVNKIKQLEREK
>NZ_CP007520.1|WP_042733306.1|450630_451938_-|ribosome-biogenesis-GTPase-Der
MKKGIVAIVGRPNVGKSSLFNRIIREKKSIVEDTPGVTRDRIYGNAEWLTREFIVIDTGGITLKEEQFTREIKVQAEIAMQEADVIVFVLDSQQGITNEDKMVAKMLYKTKKPVVLVANKYDKKQTGVESYEYLSLGFDQAVMVSSTHGIGIGDLLDRVINLMPKNDSNIKDDSTRIAIIGRPNVGKSSLVNSLVGEERMIVSDIAGTTLDAVDTKFKYHHKEYTLIDTAGIRRKSKIYEGIEKYSYLRSLSTINNSDVVLLMIDASKNITDQDTNIGGLAFEEKKPIIIVANKWDLVKNKEEQLLKKEEEIRAYFKYLQYAKIIFISALDKTRISKIIDSIEEIKESLSTKIKTHVLNEVLNRAQLINPAPEHNGGRLKIYYANQVDAYLPTFVLFVNNPNFVHFSYKRFIENQIRLQFGFEGVPINIIFRERK
>NZ_CP007520.1|WP_042733315.1|463644_465861_-|AAA-family-ATPase
MEKQIKLRGYISKFIYLSGNWGLAIFTSEENEKKTIKIKGQIGLMKTKVLYEITGSVNTHAKYGSSFDVVNFDFAQIDNKQQIINFLKSDVFPGVGNLTAKKIAEHYSENFIQEILDDKEKFLSIQGINKSKLEHIYDIIYDINQNNSLTSEFINNKLNLNILEKSQWYVNSQEELINIFTNNFFEFAFQRNLGNIEDIDKIWLHFSKNPYDINRIAYWAFHCCDEILFSTGDSYTNKEALFRKIKEFINIDINENKDLLLSSLLHAKDHNLLVFKENRIYTHNSYYDEQEIALSLDYHLKNNLNNSIDEQTLDKYILEIENEIASSKNIKDFKYDNSQINALKTFAKNNIIIITGGPGTGKTTIIQAIVKLMQKMYKKSKFSISTPTGRAAAKIRENFIESEATTIHRLLEYDGDENRFLINKHNALSFDLLIVDECSMIDNRLFSQFLQSSLKAKKIVLVGDPEQLPSVNYGNVFFDIIKTNTIPTINLEHIHRQKENNGIIDLAYMIKNNTFDITKVDQLNNVKFIFNTDKKYCLEQIKTNYAKDLDFNNPYNTQIICPMYAGTLGINNLNDLIQSNFNFNINDQQKIYQRAKNKYIESDKIMYLKNDSKLNISNGDVGIIDSIIYKNNKFDFAIVNFNNTILEFNNQNFDDLTLSYACSVHKTQGSEYDKVILVLDATHFNQFIDKKLLYTAITRAKKELIIITKEDIFIQGINRSSKKRNTTLQEVIISTLNK
>NZ_CP007520.1|WP_042733316.1|465870_466521_-|hypothetical-protein
MQEQQKQRLLNEIKFQNSRTPIWINFLVQILTVVSLFLVILFLVGGDLQNFNFNYYKKLGKLAYLYLALICLAYLILVTFINWILIWFNVLKSDALSYCLGLAMLCVSIIYTGDLMYNWTVSYTVKSLVRFVIAIVSGLIGVIIGTLLSMLQRNKEYQIEEENKIILLAYQNGEIIPTKKQLRAIKKLEYKYKKEQEELELIEFKNNLYKNKNTNQ
>NZ_CP007520.1|WP_042733317.1|466887_467154_-|30S-ribosomal-protein-S15
MISKQDKLALIKELGGSEKNTGLAEVQIAILTKEIANMTEHLKVHKKDVPTRRSLLKKVAQRRHFLNYLVRKDVNRYKAIIEKLGIRK
>NZ_CP007520.1|WP_042733318.1|467399_468317_+|Fic-family-protein
MYLTIKQTSDKWNLSEQEILDLINQNKIYGFIKENNEYKIPMDLDNPLDLIGVDLLELIDKRMEIIESFTPLEEHELNRINNDFAIEYAYNSNAIEGNTLSLREVYFIFKGMVIDKKPLKDHLDVIGHKQAFEYVLDLTKNKHGLLTEEKIKKIHNLVLIHDWRNAGVYRNVPVVISNSKHDVADVYMIQAKMQQLLDWYYNSNEHIIKKIAKFHLNFKEIHPFIDGNGRTGRLLINFELMKNGYYPIDIKYINRNLYYQAFDDYHTKNDLSTMLNLIANYELLRINYFIRILSDREKLIKQRKE
>NZ_CP007520.1|WP_042733319.1|468358_471277_-|cation-translocating-P-type-ATPase
MTDYKTQSLSEVESSLKTDFKNGLTEAEANLRLTKNGKNALPVKKPTPAVVLFLKALARPIQIVLFIAAIISIIAPLIAKHTLKPHFEDFIDFIVIMFVILLDATLETVQEIRARKSVDALKSLSQPKAIVIRDQISREIDATDLVVGDIVVLEAGKYVPAELRLIETSDCMVDESILTGESLSVEKASNAIKKTKILSDMKNIAFMSTFITSGRAVGVVIETGVNTEIGKISKAVSENEDQTTSLGRKINKFSYLISFIAVVISAFIFLLFLFTGNRDSWASYLMVAITLAIGVIPESLSAIVSITLSFSTKRMVKENVIVKKLESIETLGSVNVICTDKTGTLTQNKMTIEKVIWNNKVINSDEFVNLKANDAKNMFLKALVLPNDSITENGERIGDPTELALVDFAEMMNVDEQKFRKKYKRLDEIPFDSERKLMTTVNSLENNQKVVFTKGALDELLKKCKKIYLDNKIVKLTSDHKKEIKKATSTLSDDALRVLGYAFKIISDDDKNYESDLIFIAATGMIDPVRLEAVQAINEARKAGIKVVMITGDHAITALAIGKALDLAYTPYEVLTSEKLEQFSDQELASAIDNIKIFARVNPEHKVRIVQALQNKGYIVSMTGDGVNDAPSLSKADIGVAMGITGTDVAKQAADAILTDDNFKTIIKGVVEGRNVFQKIRRAIVLLLGFNLANVLSIVLISLFLKVSPFEASNILFINLVVDSCLAFGIGMSPLDNSLILLKPQKKNDGILKDIVWPIFQIGLSLSVAQIISFIIAMSATDMNYWMDQTKTKADNWFLFIQNNRNYFLINPTKLNEFIIFGRTAMFITSVVAPTIFSHLIKLTNWKETRKIDWTVSKPLIVGSSIVLIVSMLAFVIPGVNDTVFGLLSVNKQNHLSWNSNNFWILFTSLACALIPTLFMTITDLIQFYSYHLSSRSWENNQKLIAQLVEQDNKTQVLEQDKKKKQTKSKTN
>NZ_CP007520.1|WP_042733320.1|471283_471871_-|YihA-family-ribosome-biogenesis-GTP-binding-protein
MIKQAVFIKSAADRSGWINDEISEICFVGRSNVGKSSFINSLTNNNKLAKVANTPGKTRLLNFFDINKSQFRLVDAPGYGYAKINDATKIQFAKMMQDYFVNRKNLKGVFMLVDLRHKPTKDDIQMYEFLKYYNIKVVIVGTKLDKLKRNEYSKNEQMIKQTLGFVSSDSFIKISNLNKTNISECYDKINELLEE
>NZ_CP007520.1|WP_042733321.1|471881_472454_-|hypothetical-protein
MISNNISSSLISSIVLYVLILCLSIFIFISNFYLLFQIKVRLKLIKKENLLYLYNHKNYLIVLFNSLFDFVLLIIVSVIFSLYINQNISNKYYVFEICVIIKIINVILLYFLNPKLIKTILVINTTKYLIFSNTLIEMEKIFSIRFENKTFKKVVINYFDQNNNKEQIKLYINKNLEKWFKDNLNKYIKD
>NZ_CP007520.1|WP_042733322.1|472443_473070_-|hypothetical-protein
MDKIIAFIVLLIIYFILLIVMGLLAYLYQIKNQAFINYNKEFFKKWNEYKLKHKHENLNQTTFKFELPVDEIALLEKDFLISVNDKVKVKTKLKKQVKQNLIKDFLYDDYLFLKENVKLKKRVDYQLQQSTIYLTNKRVVINLLDSYFKILITDIKSISVCVIKKNDQFLDSCYLTTNKQEIQITGEVFDFVLTIQKLIRKRDENNDK
>NZ_CP007520.1|WP_042733323.1|473071_473758_-|hypothetical-protein
MSNNHQEVELDFFEPSLGLIIANLDNVLDELNKDNNNYIQLENLINEFENIESLDNWDQLVNKLEKLEDLIINELVNIKDSSVFNLISSLQISKHLAFLLKQNNFVFKQLDELENNSNAMKWNHQQDYIDFYKQVIVEKSNQLLKENKQLFEQLNSKKDEFKKVYNVLISEQVFDDLLEGNKLLIDILKLNINFNDILDLKRLSILNKIQAYLEFINFWQQTINLEEE
>NZ_CP007520.1|WP_042733324.1|473849_474557_+|hypothetical-protein
MIEIYKLKDLNSYDLQAYSHINPWFKNRLNKLILKNKKWILNFNLNPNDYITFDDITEVKLDKVFKEVNNYLNFFKPKIKQIITEKQLFKKFSNSIRNYMMLVGMCHAINTMIDFYKQLDKEVVLNKQQLVYLLANEVLDKKFERYTIEVLKLIPDEYKNNLKDLYSEKIEIHNSFFNSKQFVKWTAKYASRLFNNEKINQKDYLKILYLCYLENDFNRSYISLLQEFVNKLVQE

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Crispr_ID: NZ_CP007520_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP007520_8

544584-545108

Orphan

Consensus_repeat	Method
CATATTTGTTACATTTGAAGT	CRT

7 spacers

The CRISPR arrays of NZ_CP007520_8

>merge|NZ_CP007520|8|544584-545108|CRT
CATGTTTGTTACATTTGAAGTGTTGAAGTTTAGCTCACTATTAAAGTCACTTGCGTTTTTGAACATTCCTTCCATATTTGTTACTTTTAAAGTATCAAAACTTAGTGATTGATTAAATTTAAAAGCATCATTAAACATATAACTCATATCTGTTACATTTGAAGTATTAAAGTTTAATTCTTTATTAAAGTTAGTTGCATATTTAAACATATTAGACATATTAGTTACATTTGAAGTGTTGAAACTTAATGCTTGGTTAAATCTTGTAGCACCACTAAACATAAATGACATGTTTGTTACATTTGAAGTGTTGAAGTTTAATTGTTGGTTGAAACTAAAACTAGATAAAAACATATAACTCATATCTGTTACATTTCTTGTATCAAAATCTAATTCTTGATTAAAACTTGAAGCTCCCTCAAACATTCTTTGCATATTTGTTACATTTGAAGTGTTGAAGTTTAATTTTTGATTAAACTTTGATGCATTTTTAAATAAAAGAGACATATTAGTTACATTTGAAGT

>NZ_CP007520|8|1|544584-545108|CRT
CATGTTTGTTACATTTGAAGT	GTTGAAGTTTAGCTCACTATTAAAGTCACTTGCGTTTTTGAACATTCCTTC
CATATTTGTTACTTTTAAAGT	ATCAAAACTTAGTGATTGATTAAATTTAAAAGCATCATTAAACATATAACT
CATATCTGTTACATTTGAAGT	ATTAAAGTTTAATTCTTTATTAAAGTTAGTTGCATATTTAAACATATTAGA
CATATTAGTTACATTTGAAGT	GTTGAAACTTAATGCTTGGTTAAATCTTGTAGCACCACTAAACATAAATGA
CATGTTTGTTACATTTGAAGT	GTTGAAGTTTAATTGTTGGTTGAAACTAAAACTAGATAAAAACATATAACT
CATATCTGTTACATTTCTTGT	ATCAAAATCTAATTCTTGATTAAAACTTGAAGCTCCCTCAAACATTCTTTG
CATATTTGTTACATTTGAAGT	GTTGAAGTTTAATTTTTGATTAAACTTTGATGCATTTTTAAATAAAAGAGA
CATATTAGTTACATTTGAAGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007520.1\|WP_082028305.1\|538783_539104_-\|BspA-family-leucine-rich-repeat-surface-protein	unknown	unknown	gnl\|CDD\|308794
NZ_CP007520.1\|WP_042733359.1\|539310_539535_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007520.1\|WP_158438490.1\|539553_539721_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007520.1\|WP_042733361.1\|546112_548047_-\|threonine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234752
NZ_CP007520.1\|WP_042733357.1\|534112_534520_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007520.1\|WP_052491409.1\|533587_533872_-\|BspA-family-leucine-rich-repeat-surface-protein	unknown	unknown	gnl\|CDD\|308794
NZ_CP007520.1\|WP_082028306.1\|551492_553625_+\|BspA-family-leucine-rich-repeat-surface-protein	unknown	unknown	gnl\|CDD\|308794
NZ_CP007520.1\|WP_042733365.1\|555348_555768_-\|PH-domain-containing-protein	unknown	unknown	gnl\|CDD\|379617
NZ_CP007520.1\|WP_042733366.1\|555985_556210_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007520.1\|WP_052491410.1\|533904_534147_-\|BspA-family-leucine-rich-repeat-surface-protein	unknown	unknown	gnl\|CDD\|308794
NZ_CP007520.1\|WP_174407391.1\|556290_556992_-\|BspA-family-leucine-rich-repeat-surface-protein	unknown	unknown	gnl\|CDD\|308794
NZ_CP007520.1\|WP_052491418.1\|553668_555309_+\|BspA-family-leucine-rich-repeat-surface-protein	unknown	unknown	gnl\|CDD\|308794
NZ_CP007520.1\|WP_052491412.1\|539093_539345_-\|BspA-family-leucine-rich-repeat-surface-protein	unknown	unknown	gnl\|CDD\|308794
NZ_CP007520.1\|WP_042733367.1\|558858_559173_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007520.1\|WP_042733370.1\|563892_564426_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007520.1\|WP_042733368.1\|559315_561598_+\|lipoprotein	unknown	unknown	gnl\|CDD\|376628
NZ_CP007520.1\|WP_052491413.1\|543760_544120_-\|BspA-family-leucine-rich-repeat-surface-protein	unknown	unknown	gnl\|CDD\|308794
NZ_CP007520.1\|WP_042733360.1\|539797_543640_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007520.1\|WP_042733369.1\|561729_563850_+\|lipoprotein	unknown	unknown	gnl\|CDD\|376628
NZ_CP007520.1\|WP_042733358.1\|534596_538667_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP007520.1\|WP_082028305.1\|538783_539104_-\|BspA-family-leucine-rich-repeat-surface-protein	gnl\|CDD\|308794	pfam03382, DUF285, Mycoplasma protein of unknown function, DUF285. This region appears distantly related to leucine rich repeats.	4.68548e-17
NZ_CP007520.1\|WP_052491418.1\|553668_555309_+\|BspA-family-leucine-rich-repeat-surface-protein	gnl\|CDD\|308794	pfam03382, DUF285, Mycoplasma protein of unknown function, DUF285. This region appears distantly related to leucine rich repeats.	1.61717e-54
NZ_CP007520.1\|WP_174407391.1\|556290_556992_-\|BspA-family-leucine-rich-repeat-surface-protein	gnl\|CDD\|308794	pfam03382, DUF285, Mycoplasma protein of unknown function, DUF285. This region appears distantly related to leucine rich repeats.	1.22316e-52
NZ_CP007520.1\|WP_052491409.1\|533587_533872_-\|BspA-family-leucine-rich-repeat-surface-protein	gnl\|CDD\|308794	pfam03382, DUF285, Mycoplasma protein of unknown function, DUF285. This region appears distantly related to leucine rich repeats.	1.96103e-13
NZ_CP007520.1\|WP_042733361.1\|546112_548047_-\|threonine--tRNA-ligase	gnl\|CDD\|234752	PRK00413, thrS, threonyl-tRNA synthetase; Reviewed.	0
NZ_CP007520.1\|WP_082028306.1\|551492_553625_+\|BspA-family-leucine-rich-repeat-surface-protein	gnl\|CDD\|308794	pfam03382, DUF285, Mycoplasma protein of unknown function, DUF285. This region appears distantly related to leucine rich repeats.	3.15693e-54
NZ_CP007520.1\|WP_042733365.1\|555348_555768_-\|PH-domain-containing-protein	gnl\|CDD\|379617	pfam14470, bPH_3, Bacterial PH domain. Proteins in this family are distantly related to PH domains.	0.000391494
NZ_CP007520.1\|WP_052491412.1\|539093_539345_-\|BspA-family-leucine-rich-repeat-surface-protein	gnl\|CDD\|308794	pfam03382, DUF285, Mycoplasma protein of unknown function, DUF285. This region appears distantly related to leucine rich repeats.	0.000726223
NZ_CP007520.1\|WP_042733368.1\|559315_561598_+\|lipoprotein	gnl\|CDD\|376628	pfam01841, Transglut_core, Transglutaminase-like superfamily. This family includes animal transglutaminases and other bacterial proteins of unknown function. Sequence conservation in this superfamily primarily involves three motifs that centre around conserved cysteine, histidine, and aspartate residues that form the catalytic triad in the structurally characterized transglutaminase, the human blood clotting factor XIIIa'. On the basis of the experimentally demonstrated activity of the Methanobacterium phage pseudomurein endoisopeptidase, it is proposed that many, if not all, microbial homologs of the transglutaminases are proteases and that the eukaryotic transglutaminases have evolved from an ancestral protease.	2.92543e-14
NZ_CP007520.1\|WP_052491413.1\|543760_544120_-\|BspA-family-leucine-rich-repeat-surface-protein	gnl\|CDD\|308794	pfam03382, DUF285, Mycoplasma protein of unknown function, DUF285. This region appears distantly related to leucine rich repeats.	8.12516e-28
NZ_CP007520.1\|WP_042733369.1\|561729_563850_+\|lipoprotein	gnl\|CDD\|376628	pfam01841, Transglut_core, Transglutaminase-like superfamily. This family includes animal transglutaminases and other bacterial proteins of unknown function. Sequence conservation in this superfamily primarily involves three motifs that centre around conserved cysteine, histidine, and aspartate residues that form the catalytic triad in the structurally characterized transglutaminase, the human blood clotting factor XIIIa'. On the basis of the experimentally demonstrated activity of the Methanobacterium phage pseudomurein endoisopeptidase, it is proposed that many, if not all, microbial homologs of the transglutaminases are proteases and that the eukaryotic transglutaminases have evolved from an ancestral protease.	8.3927e-16
NZ_CP007520.1\|WP_052491410.1\|533904_534147_-\|BspA-family-leucine-rich-repeat-surface-protein	gnl\|CDD\|308794	pfam03382, DUF285, Mycoplasma protein of unknown function, DUF285. This region appears distantly related to leucine rich repeats.	9.30184e-05

>NZ_CP007520.1|WP_052491413.1|543760_544120_-|BspA-family-leucine-rich-repeat-surface-protein
MKSMFSGASSFNQDISHFNTSKVTDMQSMFSGASSFNQNINTQEKQKADGSKYTAWDVSKVTDMRFMFQNAKAFDQDISKWNVIISDAEKFKDFNSGANAEFKDQKLPEKIRNSLRTNS
>NZ_CP007520.1|WP_042733360.1|539797_543640_-|hypothetical-protein
MASKSKLLSIIAGLLVSSSSVAGVTVGVLHNKRKLDAKTVNLNNDIPENMRSLQILYTENQEQILGLINEQRKILQTEKSHIDIQIKDVEFKFNSSVPSVTISAKKSSRFLKGSVEIKFNKPNINSLIKQEKRNLGVFEVRTIEKVIEILAERNLLDNRDFNAEKIKQNFDIQINEQQKTIKVKAKSDSIFYVGEVEFRYDLPQFSTLSDLKTNVDQLTDNNSNTVLNRFFELNKTLFEKENVKISRDQLQVEVSQNTAKITLTGNKNYQGSITVDIKVKDQFSSINDLNVLVDQLVNNNSETVLNRFWDMHKAKLEQLNINKTDLKVEVQSSQNKAVISITHTNYQGSITVDIKVKDQFSSINNLNVLVDQLVNNNSETVLNRFWDMHKAKLEQLNINKSDLKVEVQSSQNKAVISITHSNYQGSITVDIKVKDQFSSINDLNVLVDQLTNNNSETVLNRFWDMHKAKLEQLNINKTDLKVEVQSSQNKAVISITHSNYQGSITVDIKVKDQFSSINNLNVLVDQLVNNNSETVLNRFWEIHKSKLEQLNINKSDLKVEVQSSQNKAVISITHSNYQGSITVDIKVKDQFSSINNLNVVVDQLVNNNSETVLNRFWEIHKSKLEQLNINKSDLKVEVQSSQNKAVISITHANYQGSITVDIKVKDQFSSINNLNVLVDQLVNNNSETVLNRFWEIHKSKLEQLNINKTDLKVEVQSSQNKAVISITHSNYQGSITVDIKVKDQFSSINNLNVVVDQLVNNNSETVLNRFWEIHKSKLEQLNINKSDLKVEVQSSQNKAVISITHANYQGSITVDIKVKDQFSSINNLNVVVDQLVNNNSETVLNRFWEIHKSKLEQLNINKSDLKVEVQSSQNKAVISITHANYQGSITVDIKVKDQFSSINNLNVVVDQLVNNNSETVLNRFWEIHKSKLEQLNINKSDLKVEVQSSQNKAVISITHGNYQGSITVDIKVKDQFSSINNLNVVVDQLVNNNSETVLNRFWEIHKSKLEQLNINKSDLKVEVQSSQNKAVISITHSNYQGSITVDIKVKDQFSSINNLNVVVDQLVNNNSETVLNRFWEIHKSKLEQLNINKSDLKVEVQSSQNKAVISITHANYQGSITVDIKVKDQFSSINNLNVVVDQLVNNNSETVLNRFWEIHKSKLEQLNINKSDLKVEVQSSQNKAVISITHSNYQGSITVDIKVKTDIATLGLDTNVRVFWDASVSQAFTRFLNINLEKLIPHGLNSRKYFTITSFSLEKRWFKIKVVDHDSFQGELEIIY
>NZ_CP007520.1|WP_158438490.1|539553_539721_-|hypothetical-protein
MLNSFIKLNSSLLNSHKITRQQLKAIVSDNVALITIIDNDKQYLGSVKVKLSLSK
>NZ_CP007520.1|WP_042733359.1|539310_539535_-|hypothetical-protein
MFSEIDHNSILRRINILNEWNLNLNDLNIQVQGNTATITGIRHWNEKFIKTITAQFGLTAEYTNDRRVNKNWIL
>NZ_CP007520.1|WP_052491412.1|539093_539345_-|BspA-family-leucine-rich-repeat-surface-protein
MIEELTRIGFFKNSFGEWQIEKVDTITSKVVPNLPTFINSLESAFTRNINSTISGLESWDTSNVPNMKSMFSDVKKLQPSFRR
>NZ_CP007520.1|WP_082028305.1|538783_539104_-|BspA-family-leucine-rich-repeat-surface-protein
MGDKFDTSQVTTIERMFRGAESFNQNINTQEKQKADGSKYTAWDVSKVRDVSAMFQNARAFNQDISKWNVTINDTELFKNFNSGANAEFKDQKLPEKIRNSLRTNS
>NZ_CP007520.1|WP_042733358.1|534596_538667_-|hypothetical-protein
MASKSKLLSIIAGLLVSSSSVAGVTVGVLHNKRKLDAKTVNLNNDIPENMRSLQILYTENQEQILGLINEQRKILKTEKSHIDIQIKDVEFNFNPSVPSVTISAKKSSRFLKGSVEIKFNKPNINSLIKQEKRNLGVFEVRTIEKVIEILAERNLLDNRDFNAEKIKQNFDIQINEQQKTIKVKAKLDSIFYVGEVELRYDLPQFSTLSDLKTNVDQLTDNNSNTVLNRFFELNKTLFEKENVKISRDQLQVEVSQNTAKITLTGNKNYQGSITVDIKVKDQFSSINDLNVVVDQLVNNNSQTVLNRFWDMHKAKLEELNINKSDLKVEVQSSQNKAVISITHTNYQGSITVDIKVKDQFSSINNLNVLVDQLVNNNSETVLNRFWEIHKAKLEQLNINKSDLKVEVQSSQNKAVISITHANYQGSITVDIKVKDQFSSINDLNVVVDQLVNNNSQTVLNRFWDMHKAKLEELNINKSDLKVEVQSSQNKAVISITHANYQGSITVDIKVKDQFSSINNLNVLVDQLVNNNSQTVLNRFWDMHKAKLEELNINKSDLKVEVQQQQNKAVISITHANYQGSITVDIKVKDQFSSINNLNVLVDQLVNNNSQTVLNRFWDMHKAKLEPLNINKSDLKVEVQQQQNKAVISITHANYQGSITVDIKVKEQFSSINDLNVLVDQLVNNNSQTVLNRFWDMHKAKLEELNINKSDLKVEVQSSQNKAVISITHANYQGSITVDIKVKDQFSSINNLNVLVDQLVNNNSETVLNRFWEIHKAKLEQLNINKSDLKVEVQSSQNKAVISITHANYQGSITVDIKVKDQFSSINNLNVLVDQLVNNNSQTVLNRFWDMHKAKLEPLNINKSDLKVEVQQQQNKAVISITHANYQGSITVDIKVKDQFSSINDLNVVVDQLVNNNSQTVLNRFWDMHKAKLEELNINKSDLKVEVQSSQNKAVISITHANYQGSITVDIKVKDQFSSINDLNVVVDQLVNNNSQTVLNRFWDMHKAKLEELNINKSDLKVEVQSSQNKAVISITHTNYQGSITVDIKVKDQFSSIDNLNVVVDQLVNNNSQTVLNRFWDMHKAKLEELNINKSDLKVEVQSSQNKAVISITHTNYQGSITVDIKVKDQFSSIDNLNVVVDQLVNNNSQTVLNRFWDMHKAKLEELNINKSDLKVEVQSSQNKAVISITHTNYQGSITVDIKVKTKINEIRELNTNVGAFNSDEPNAIIDTFIDKNKDKLVGLNRDSFTVITNENGKLKIKVVDTHDSFQGTVEITYSIKIDIATLGLDTNVRVFWDETINKALSTFMNINLKKLIEHGLNDRRFFTVIDFSLESRWFKIKVVNNDSFQGELKILY
>NZ_CP007520.1|WP_042733357.1|534112_534520_-|hypothetical-protein
MLNSFIKLNSSLLNSHKITRQQLKAIVSDNVAWIKIIDNDKYLGLVKVKLSLSKQLHDYLNAFSEIDHNSILRRINILNEWNLNLNDLNIQVQVNTATITGIRHWNEKFIGIITAQFGLTAEYTNDRRVNKNRIL
>NZ_CP007520.1|WP_052491410.1|533904_534147_-|BspA-family-leucine-rich-repeat-surface-protein
MIEELTRIGFFKNSFGEWQIEKVDTITSKVVPNLPTFINSLESAFTRNINSTISGLESWDTSNVTNMKSMFSDTKTSTKL
>NZ_CP007520.1|WP_052491409.1|533587_533872_-|BspA-family-leucine-rich-repeat-surface-protein
MEWMFRGAESFNQNINTQEKQKADGSKYTAWDVSKVRDVSAMFQNAKSFNQDISKWNVTINDTELFKDFNSGANAEFKDQKLPEKIRNSLKTNS
>NZ_CP007520.1|WP_042733361.1|546112_548047_-|threonine--tRNA-ligase
MKIILLDNSVKEFNSAMKVKELSQSILGSYSKNIIAAKVDKKIVDLEYVVDKDCSLELIDAKHKNYELVLNSTLGFIAAYAIKQLKPNAKLAEVLFNNDEMEFSTTFELEPRMVLDELKQVQKKVSEILASDLVIKSEQVSLDEAKKLLSDNDYQLHLAEKMNEKFNYVQLYSINDFTMVLENAILLDFKQIKAVDIQQLTGSYWLNDASNLMLSRVHGLCALSEKQLNEKKALLEDRRSRDHRTINKSLKIFGFDNLVGAGLPLWLPNGYILKNEIEKYLREKEWEYDYIPVETPPIGSVELYKTSGHWDHYGEDMFQPFNGGKGSGEQFILRPMNCPHHIAVYKQEQRSYRDLPLRICEHAIQHRFESSGSLTGLERVRGMKLTDSHIFSRPDQIEEEFRRTYKLISEVLETFNIEIDYLSLSLRDPEDKVKYFQDDDMWNNAEASLEKVLQDLGLKYKKCIGEAAFYGPKLDIQIKTAQNHEITVSTIQLDFLMPMKFNLSYVDKDQKLVRPIMIHRGLIGTYERFVAILLEQTKGVLPVWLAPRQVEIIPVNSDSQAYANKVFEMLKKQFVRSHIDLRDERLSYKIRDAQTSKIPYQLVLGNNEVNNNTITYRRYGSEQQITVPVQEFIDMLTQQIKDKK
>NZ_CP007520.1|WP_082028306.1|551492_553625_+|BspA-family-leucine-rich-repeat-surface-protein
MMKLNKKIVSVIAIATFVPASIAGVGVGIWYSQPKIKDLSSLISNKDLGVISEADKTNQKLLLNLIKEKNPSLDINKVELVIQENKVIIKPKVGDKTYQGQVEITFSLGYIDLTKLIKETNLGTINESDLDDTNKLIDLIKQKNQSIDVDFDKLDLEINRDAKTIIVKPKNGNKTYKGEVTLNFLIKTKINEIEDLNTNAGIFNSNTPDAIISQFIENNKDRLEDLTKDDFDVVSNDNGKLKIRVKDSNTQYQGEIEIIYSVKDQFSSIEKIEKEITNLKNNDTESVLNRFVELNSSLLDSNKITRDQLKAVVADDVATITIDGNDKYQGSIETKLNLSKQTQKYLGVLSNNDKNSILKEVVNRNSWNLNSNDLDIQVKGNTATITGKTEKNKKFIGTITAEFGLTATYTNNNKELTRIGFFKNNANEWQIEKVKTDTNKVVSVLPAFITSLEDAFEENKSETILGIESWNTRNVTNMSHTFSKAKNFNHNVGNWDTSKVTNMSHMFAEAKNFNQYIGRWNTSNVTNMDHMFYSAKKFNNFISEWDTSKVTNMSSMFYGANIFNQSIGNWDTSNVTDMGGMFGNAYEFNQDISKKTVKRKGGSTYTAWDTSKVTDMSYMFQHTENFNTNIGNWNTSKVKDMRHMFAGAQKFNQNIGSWDVKSVENMAHMFESAKVFNQNLTRWEVKQVKDHTKFNLDGVMNNSNIPHRFR
>NZ_CP007520.1|WP_052491418.1|553668_555309_+|BspA-family-leucine-rich-repeat-surface-protein
MKLKNKKIPIISSIALVFAPIIGVVAGVSIKNNQLKTKEKHIAKIKQIWDSEFKDKFFDESLKNINLSFNFKDVYLTNQKLLKTVTKRLKAHGLNISISKGEEDIEDKVWNETVINHKHKTQTFKIKYQDEVISLPFGEFNKVSTKFKDDSFEEITEIGYLITPDGLFTAIFLDSKSIDKQSQEKQKASLKKVPKILPPTIDSLNSAFSFIDGQEIKGIEKWDTSNVISMKNVFNGSENFNQALNWNTKNVIDMSGMFNRTSFNNDSIIKWNTSNVTNMSFMFFGATSFNQDINSWDVSNITNMSSMFANAEKFKKQLTKWDTSKVTNMSGMFANAVEFNGDIRKWKTSNVTDMSQMFLGSDSFDQDISGWDTSKVTRMNQMFLGTKNFNQNISSWNTSNVTNMSSMFEEAAKFDQNIGNWDVSNVTNMSSMFKKTKSFNQNIGNWDTSSVTDMRSMFSKAEKFNQDISTKQVQKGELKYTAWDVSNVKNMSEMFSGAKSFKHNISNWDVSKCERFENFIKGDSKMTKNLIPEKFRDDIDNNIDVN
>NZ_CP007520.1|WP_042733365.1|555348_555768_-|PH-domain-containing-protein
MKSKESIINDLKNNLSNNLYLVNKKEFNDLVNLFFDDEEIIDLLVVGIENKAWLLTLTNKRLFFVKKHNLYNNVIKQYGLEQLKDLRLTDSTQFASLSFVFDNDFIKVENITLNEAKLIGKKIAQSNINWLDEINNMVK
>NZ_CP007520.1|WP_042733366.1|555985_556210_+|hypothetical-protein
MNNLSNINNESSAMKIVVNAVRTKLGSFTKQDIVDLCVSISVSSVEQCLSTLVKEQKIATKNSGKNTIYYALDI
>NZ_CP007520.1|WP_174407391.1|556290_556992_-|BspA-family-leucine-rich-repeat-surface-protein
MFSDAEAFNQDVNTKQVVKDDGSTYIAWDISKLTSLSGVFFGAKSFNSSLDKWNTENITNMVSTFSKTEIFNQDISMWDTSKVTDMSSMFNGAESFNQDISKWNTSNVTDMSGMFSDAKAFNQDIKTKQVKKDDGSTYTAWDTSKVTDMSYMFSWTEAFNQDISNWNTSKVTDMSNMFWLAKSFEQNISNWDVNEVERHREFINDTSKLKDKLEFIPEKFRQKLIEEFNKNKK
>NZ_CP007520.1|WP_042733367.1|558858_559173_+|hypothetical-protein
MKIIGFWRRVWIHFLTNIFIIFTAGFYLIFLIIAFVKGKPNLAMRLSNTTYSNPKRMFRLFIFLLLSVLIHATVIGLIIDIIRIIMKKGTFAEKWSNNYYIKSN
>NZ_CP007520.1|WP_042733368.1|559315_561598_+|lipoprotein
MNRLLKLLSTLLAVSSSSVLATSIVSCTVSNNQKVNDETKKDDDQSNNGSDDQNGDESKTDDENKDDPIPDNNDQSDRSNDENKTPDSDNDSNTTPGENNLKPDNESDSSNQNETVNISNISDLNKINEVYLKQTISDFKEIKNSQKNIKNMILNRDLPSNFYSHSDFDLDKDEIILDENLNNNVSLKLINKKDKTQVSNSEIKWYQRTTTPYDEVFKIGENDSKKVTFNLLKDGVLQWKDNTDPTRLSDQQETQAKIYAEYKGYLFSASVRVLHKAHGQLLHENNLARKAAKDIVNQHNWKELPTLERLKQAYNWITKNVKYDFDRDNLNRNQNVHSALVLRKTVCTGYAKGLKMLLEELDIPCKFVEGKSSRDNALKHAWNQVLVDGKWYYVDATSDRVDNENQETDYLFFLNTDDDFSVDDEFTRNEDNKDAHLRNIFFKNFVSTKEDVLGLIDNNFDENTKQMKDFILYTPNKSTFKNKKPNYKHINEALNERGLEAKATFLPSKGSNDVIKYIFDKTPSKSFKEVNIKNIKLLEDKNAIEVEFDQKVEGLKVKNFNITNALIKSVEEKEKSYILNLHHFKSFGQVKVKLESVKRKDYKFNNLKNSTVTFNLTKQKLVDIQAKIISDDHIKLITNDKNLQYSFEYGKWQDVNDDLIIDLKTQKQGKLLIKSKNELIDEIKTIEISRPSINEYQLKAFNNAIVGVNESMEYRKQGSEQWISIDKNKVTNLNKNSTYEVRYKAKDHSFASESVFVNIA
>NZ_CP007520.1|WP_042733369.1|561729_563850_+|lipoprotein
MNKLLKQLMTLLSISSTLTATTTVISCTVSNNQKADGETKKDDDQSEKINNDNQDTNNNNVDSNLSKINDIYFNQTIKEFKEITTSFNDIKNMILNRDLPDNFYSHSDFYLDKSEVILDEKENDKVLLKLINKKTGLAVSNSEIKWYQRTLIPYDEVFSVNQNDHSKVTFKLLNDGTMQWKDNTDPNDQYHKEDTQAKIYAEYKGYLFSANVRVLNKAQSDLNYENNLARKAAKDIVEKHNWKELPTLERLKQAYDWITKNVEYDFNKDNLFKNQNAYTALVTRKTVCTGYAKGLQMLLDELDIPCKVVEGESTREDGAKHAWNQVLVDNKWYYVDPTSDRVDTKKGEKETKYTFFLNTDKDFSLDDRFTRNQDSEDAHLRNLFAGNFVGSKEDFLGLIDNNYDVETKIVKSFEILIPNGDANENKKPDFRAIHKALEERGHLETKSTFLPSKGSFYVVKYSFPNIQKTPDNLFKEVNIKNIKRLNNRNAIEVEFDQEVNGLIAQNFNITNALIKSIKQNGKSYILNLYHFNSFGDVKVKLESVKRKDYKFNILNDSTVIFKLEKQKLNDIRVKIINDEQVEIISENKNLEYSFQFSKWQNVNQNLIINMPGKEGKLLIRSKSDLSPEFKTIQITRPSLFDFQLKTFNNAIVGVDESMEYRKQGSQEWISIDKNKITNLDKNSTYEVRYKATDHSFASESVFVTIA
>NZ_CP007520.1|WP_042733370.1|563892_564426_-|hypothetical-protein
MFLLTESNNVNKATTNMPVWLIVIIFILGIIGVAVAAWGAKSGFSWREILNAKNKDSNKVKRILSTRKNYNWIEVSEAEETGLMIIGVSFKNAVYSPDSIPVLLLKSLDFSKSIRDFKKDLETKKNYKKFFEYMHKMNFKKEDIIFIVIDKAESVEELDHSFNSWLSIVNAKSTGLN

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Crispr_ID: NZ_CP007520_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP007520_9

836163-836484

Orphan

Consensus_repeat	Method
TTGTTACGTTTGAGGTGTTTCAGTT	CRISPRCasFinder

4 spacers

The CRISPR arrays of NZ_CP007520_9

>merge|NZ_CP007520|9|836163-836484|CRISPRCasFinder
CAATTACATTAGAAGTGGTTCAGTTATTTAAAGGTTGGTTGAAAGATTTGGCAAAACTGAACATAGCAAACATATCTGTTACGTTTGATGTGTTTCAGTTGTTTAAAGGTTTATTAAATTGTGTTGCTCCTTCAAACATACCACCCATGCTTGTTACGTTTGAGGTGTTTCAGTTTGATATGTCTTGGTTGAAGTCGAAAGCATTTAAAAACATATATTCCATAATTGTTACATTTGAGGTGTTTCAGTTGTTTAGTGGTTGGTTGAAGCTACTTTTTGCAAACATGTAACTCATATTAGTAACATTTGAGGTATCTCAATT

>NZ_CP007520|9|7|836163-836484|CRISPRCasFinder
CAATTACATTAGAAGTGGTTCAGTT	ATTTAAAGGTTGGTTGAAAGATTTGGCAAAACTGAACATAGCAAACATAT
CTGTTACGTTTGATGTGTTTCAGTT	GTTTAAAGGTTTATTAAATTGTGTTGCTCCTTCAAACATACCACCCATGC
TTGTTACGTTTGAGGTGTTTCAGTT	TGATATGTCTTGGTTGAAGTCGAAAGCATTTAAAAACATATATTCCATAA
TTGTTACATTTGAGGTGTTTCAGTT	GTTTAGTGGTTGGTTGAAGCTACTTTTTGCAAACATGTAACTCATAT
TAGTAACATTTGAGGTATCTCAATT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007520.1\|WP_042733560.1\|842216_843161_-\|bifunctional-oligoribonuclease/PAP-phosphatase-NrnA	unknown	unknown	gnl\|CDD\|223691
NZ_CP007520.1\|WP_042733553.1\|832319_833852_-\|cardiolipin-synthase	unknown	unknown	gnl\|CDD\|234967
NZ_CP007520.1\|WP_042733558.1\|839649_840498_-\|peptide-chain-release-factor-N(5)-glutamine-methyltransferase	unknown	unknown	gnl\|CDD\|274634
NZ_CP007520.1\|WP_004428928.1\|840490_841582_-\|peptide-chain-release-factor-1	unknown	unknown	gnl\|CDD\|234801
NZ_CP007520.1\|WP_042733552.1\|831745_832312_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007520.1\|WP_042733554.1\|833836_834568_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007520.1\|WP_042733562.1\|845555_846446_-\|class-II-fructose-1,6-bisphosphate-aldolase	unknown	unknown	gnl\|CDD\|238477
NZ_CP007520.1\|WP_042733557.1\|838107_839637_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007520.1\|WP_042733546.1\|820399_821392_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007520.1\|WP_042733559.1\|841585_842212_-\|thymidine-kinase	unknown	unknown	gnl\|CDD\|235272
NZ_CP007520.1\|WP_004428921.1\|845138_845420_-\|50S-ribosomal-protein-L31	unknown	unknown	gnl\|CDD\|376487
NZ_CP007520.1\|WP_042733556.1\|837632_838133_-\|Sua5/YciO/YrdC/YwlC-family-protein	unknown	unknown	gnl\|CDD\|223088
NZ_CP007520.1\|WP_042733549.1\|824947_826339_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|225180
NZ_CP007520.1\|WP_042733547.1\|821417_822542_-\|serine-hydrolase	unknown	unknown	gnl\|CDD\|365903
NZ_CP007520.1\|WP_042733561.1\|843162_845040_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007520.1\|WP_042733563.1\|846560_847400_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007520.1\|WP_042733551.1\|830391_831672_+\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP007520.1\|WP_042733555.1\|834616_835531_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007520.1\|WP_042733548.1\|822649_824686_-\|PTS-transporter-subunit-EIIC	unknown	unknown	gnl\|CDD\|273923
NZ_CP007520.1\|WP_042733550.1\|826490_829385_-\|DUF285-domain-containing-protein	unknown	unknown	gnl\|CDD\|308794

Protein	Function_ID	Function_description	E-value
NZ_CP007520.1\|WP_042733560.1\|842216_843161_-\|bifunctional-oligoribonuclease/PAP-phosphatase-NrnA	gnl\|CDD\|223691	COG0618, COG0618, Exopolyphosphatase-related proteins [General function prediction only].	5.12329e-62
NZ_CP007520.1\|WP_042733553.1\|832319_833852_-\|cardiolipin-synthase	gnl\|CDD\|234967	PRK01642, cls, cardiolipin synthetase; Reviewed.	2.12073e-99
NZ_CP007520.1\|WP_042733558.1\|839649_840498_-\|peptide-chain-release-factor-N(5)-glutamine-methyltransferase	gnl\|CDD\|274634	TIGR03534, RF_mod_PrmC, protein-(glutamine-N5) methyltransferase, release factor-specific. Members of this protein family are HemK (PrmC), a protein once thought to be involved in heme biosynthesis but now recognized to be a protein-glutamine methyltransferase that modifies the peptide chain release factors. All members of the seed alignment are encoded next to the release factor 1 gene (prfA) and confirmed by phylogenetic analysis. SIMBAL analysis (manuscript in prep.) shows the motif [LIV]PRx[DE]TE (in Escherichia coli, IPRPDTE) confers specificity for the release factors rather than for ribosomal protein L3. [Protein fate, Protein modification and repair].	2.74093e-77
NZ_CP007520.1\|WP_004428928.1\|840490_841582_-\|peptide-chain-release-factor-1	gnl\|CDD\|234801	PRK00591, prfA, peptide chain release factor 1; Validated.	0
NZ_CP007520.1\|WP_042733562.1\|845555_846446_-\|class-II-fructose-1,6-bisphosphate-aldolase	gnl\|CDD\|238477	cd00947, TBP_aldolase_IIB, Tagatose-1,6-bisphosphate (TBP) aldolase and related Type B Class II aldolases. TBP aldolase is a tetrameric class II aldolase that catalyzes the reversible condensation of dihydroxyacetone phosphate with glyceraldehyde 3-phsophate to produce tagatose 1,6-bisphosphate. There is an absolute requirement for a divalent metal ion, usually zinc, and in addition the enzymes are activated by monovalent cations such as Na+. The type A and type B Class II FBPA's differ in the presence and absence of distinct indels in the sequence that result in differing loop lengths in the structures.	5.25781e-141
NZ_CP007520.1\|WP_004428921.1\|845138_845420_-\|50S-ribosomal-protein-L31	gnl\|CDD\|376487	pfam01197, Ribosomal_L31, Ribosomal protein L31.	1.0484e-26
NZ_CP007520.1\|WP_042733556.1\|837632_838133_-\|Sua5/YciO/YrdC/YwlC-family-protein	gnl\|CDD\|223088	COG0009, SUA5, Putative translation factor (SUA5) [Translation, ribosomal structure and biogenesis].	1.57968e-22
NZ_CP007520.1\|WP_042733549.1\|824947_826339_-\|MFS-transporter	gnl\|CDD\|225180	COG2271, UhpC, Sugar phosphate permease [Carbohydrate transport and metabolism].	3.84292e-84
NZ_CP007520.1\|WP_042733547.1\|821417_822542_-\|serine-hydrolase	gnl\|CDD\|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	2.37095e-50
NZ_CP007520.1\|WP_042733551.1\|830391_831672_+\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	3.21117e-27
NZ_CP007520.1\|WP_042733559.1\|841585_842212_-\|thymidine-kinase	gnl\|CDD\|235272	PRK04296, PRK04296, thymidine kinase; Provisional.	8.82693e-86
NZ_CP007520.1\|WP_042733548.1\|822649_824686_-\|PTS-transporter-subunit-EIIC	gnl\|CDD\|273923	TIGR02002, PTS_system_glucose-specific_IIABC_component, PTS system, glucose-specific IIBC component. This model represents the combined B and C domains of the PTS transport system enzyme II specific for glucose transport. Many of the genes in this family also include an A domain as part of the same polypeptide and thus should be given the name "PTS system, glucose-specific IIABC component" while the B. subtilus enzyme also contains an enzyme III domain which appears to act independently of the enzyme II domains. This family is most closely related to the N-acetylglucosamine-specific PTS enzymes (TIGR01998). [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	6.07623e-104
NZ_CP007520.1\|WP_042733550.1\|826490_829385_-\|DUF285-domain-containing-protein	gnl\|CDD\|308794	pfam03382, DUF285, Mycoplasma protein of unknown function, DUF285. This region appears distantly related to leucine rich repeats.	4.24589e-32

>NZ_CP007520.1|WP_042733555.1|834616_835531_-|hypothetical-protein
MNQYSLIFNYRDNKHYNLELNSIIKKRGYQTYEDWILKNQIDLGFTPICAVNDRNGVLGVCGFLKNGITINKTSVNSLLITNQFVKSKAGNDDMVDQMIKGVINKYERIVDLFYTFSNNENDQTLIRNGFKKAKEYTYFMQWDQNVESELAVVKKLSPENNAKDLEFIKDYLFHSAKENSLFSVKEDKDLQIYNLLKYYKNNIYYLANLDAIVMFSITGHTFQLMGLYSKNEINIKTLLQNIVPKGISLIEFYFVPNIKNKFVVKELRKIMVGEEHHRSFVYIRENTTNLEASKFIFPLLNRLK
>NZ_CP007520.1|WP_042733554.1|833836_834568_-|hypothetical-protein
MSTKLTKKNVASFLKRQKYFRNFINENDLLYTDFKKFFAKRSSNSLVKNYLYILGISNMKIDTKQHWDVFNFINLCAYYLYYNFTKNKSKNKLEDMHKTIILNTEKLEFNDLNINYEQQALEILSKEFKIKFTEKQIKKYFSYHEIYCYIANAFSKFFYDDKKQNLYDYIYWLTFYILVSKYFFKKNHIQSKLFMLQLISNQKFTEAIAKFSPELFNLLIIKNNRFSKTRKKHNKGTEQWKNR
>NZ_CP007520.1|WP_042733553.1|832319_833852_-|cardiolipin-synthase
MKKPLVATLSLIFMFGLAIAILAITSVYAQWYNWISFFIFHSICCSWALVVLANKKRRFETRIRWSSFIAFVPIFGIISYIFFGRPYKYKTTKNYSIIDFKQKQTKQEQKEIESILTNQIPQFKRSFKTGQNNLNLNLYKNSDVEFLDNGNKLFLSLFKDISNAKNYILLNFYIIKEGRLLEQLTNLLIKKLKQGVRVYIIYDFVGSYDVFLKSKKKLIGHGANIVSYAKVHFPFIKWTANYRNHRKDISIDGKIGYVGGINIGDEYINLSKKFGYWNDAHIRITGSAVQGIEKIFVSDYEFYKNSKLPSILEVEKNIGKIHALKENKNSLVRIISSGPNHNEPIHLSVFTNLINSAQKRIWISTPYFIPPQEITSALISAANTGIDVRILIPGMSDKPFLLDETKQWTRDLYKAGVKIYSMNNVFNHSKVYLIDDEISFTGSTNLDYRALFADQQTMVLAYSKELNKQISDKFKWDFDHSFEFNFTPNDEINWFRKIIVKILNIIQPLL
>NZ_CP007520.1|WP_042733552.1|831745_832312_-|hypothetical-protein
MLKEIYLQINNLYNDFKMCSSFSYLPIYSHFIKHNHLIKNITQAKEFKKVVNLIYQEGKENNFLNLAIYDVIKIISFKLDYFLNYLYVYYSEIENKSNYIKISTLIKLSIIIKFEYKKYLVEQNKIIDLLNEFEHLDINQNYETLNIKIEEIIKLISNALIKDINVKNDNKLNSLYDYLDILRFIKTV
>NZ_CP007520.1|WP_042733551.1|830391_831672_+|IS3-family-transposase
MKKGKQLSVSEWLEVFKHYKEYLSQNITKKEFCYIYSKIRNSENYLLSEEAFWYLSRKYKDYNLGMELKESQTGKAPKKGKGSGRPRKNKEEYDKQRNEVIKEIDREVLEWLITDLFKEDILKKNKVDNLDELIEKIKKKFGENISNKEIMKILGIPKSTFYYKIKKQSKDKKEAVIEHAEIIREAFAKQNGRYGRERLSAYIFKTYGIIINPRTLGRAMNKLGLFCHVRTTCKKKRESKNTNVYYPNIANRDYNGLQNDIYASDVSYIPAPIDVEGRHVYLSIVIHHKTKKIVSYNLSIYNDTNLIMTHIRKTKFPKNFIIHTDHGVTYSSNEYLEYIKQRGGVVSMSRIGNSLDNREAEYFFSILKSEMFYNFEKKVKEMTFSELKECIKNFIEWYNNERILKKFKWKTPQELWGVYNKHNYLV
>NZ_CP007520.1|WP_042733550.1|826490_829385_-|DUF285-domain-containing-protein
MTDNSRSWEQKNRPILKSDTKSVQVQTRVKEIWNKELKDKVVVAEGEMVKKTEILEKIKEVLKTQASDLDIQDVKLFEDEKDRLINRDPEDKLKQTIKIKINDRIGVLLDVGKTAEAFTIYIDNEGNEQKTAEKDLYNIKAKEIKQIGYYHDGKNIRAVRMPKTVEKVPSQLPDKITSISNMFEGWGSDNLTNIEDIKNWNTTNIVEMNEVFKGSWIYQQDLKWDTQNVTSMKSMFENSWFDGDISSWDVRKVTDMSKMFHRADWFNNNSISSWQIDSLKNISNMFNGAIRFNQDISHWDIKNQRLTNVDNIDINTPAWEDKNKPFPRTIQLKDISEIIKQDQRNIGSINISNSEERKTKILEILKQKYPKLDFDSLVLEVNSNTQATLKSVDGDKRRYKNEVIINYSTKDNISNLGLTTNSIIVNSNDKNEIIDEFIKRNEGKLDGLTKSDFEAVGEPKDNSITLKVREGNNKYHGSIVVNFTIRTQINSVARNTDAGAFDAYNFDQIINAFISKNPQLQGLTKNNFEVVGQPTNNSVTVKVKNSDKFQGQITINFTIRTQINSVARNTNVGAFDAYDKDQIINAFISKNPQLQGLTKNNFEIVGDPQNNSVTVKVKNSDKFQGQITINFTIRTQINSVARNTDAGAFDAYDKDQIINAFIAKNPQLQGLTKDNFEIVGDPSNNSVTVKVKNSDKFQGQITINFTIRTQINSVARNTNVGAFDAYDKDQIINAFIANNTALSGLTKNNFEVVGQPTNNSVTVKVKNSDKFQGQITINFTIRTQINSVARNTDAGAFDAYNFDQIINAFIANNTALSGLTKNNFEVVGQPTNNSVTVKVKNSDKFQGQITINFTIRTQINSVARNTDAGAFDAYNFDQIINAFISKNPQLQGLTKDNFEIVGDPSNNSVTVKVKNSDKFQGQITINFTIQKQNNKNIIIGSSAAVGGVGLLGTIMAFIRRRKRK
>NZ_CP007520.1|WP_042733549.1|824947_826339_-|MFS-transporter
MKNRSWFNFLNPKIVDEKDKLSEKNLYDFILKKEYKKRQEYNFLMVFFGYMVYYFTRKQWTTFGSEMANQHIITDTQYALVGLCSSVAYGISKFVTSPLSDIKSNRWLFGLGLSITGVVNILLGVVWLDNFTSSITTTIILSCIFLIIKGFIDSFGANPALRLIYNFFNHKSRRYRVIVWDIAHNIGGALAAFIITGSFTIFGTQFGRLAYFIIPSVISIVFGIVIILVARDRPEELGLPSVQEYYNLELIGSKKGEVDDKPYSYYVKEYIIKNHYIWLLVIANLCNYILRMGIGDWSFRFFKEVHNFDIKKEAKYLYSLFEIGAVVLTLSIGLPVNKYFKKFVPIIVLCLLLGTGSIIGLWLAPKGAIAQIGLFIFLAGVVYVPQCFFKLLAVELSHHRVVGTVSGILGIAGYAGDALFSKVVIGIGIKPHLGFNGIFPFFIAAGILAILVILPMWNKKASQ
>NZ_CP007520.1|WP_042733548.1|822649_824686_-|PTS-transporter-subunit-EIIC
MQKQSQKPMQSFFDNLKKFGTNIMPTLSKLSKAFLLPIALLPIAGVFLGVGATIADNTKILDSAGQLASVQSAFYYIGSAMKAMGAVCFDNLPVFFCISVALAYTKDSGIAALTALVGFLVLNGIQSALIHDVKVTVGNKEITQIHLLWYYGDWSLPEKLLTSNLGIRSLNTGVLAGIFVGAISAKVYNKFHAIQLPSAISFFSGTKFVPIITFAAVLPLSLIFAMAWPVVGIGFSWVGQNSGKLPYGTDSLMFEIIERSLIPFGLHHVFYAPLWWTGAGGSIAGALDNVKDAGVQAQQTFADAYNKIHGTGLNFTEILQLIQRNPKLFGAEGDQFMAQQILSHADIFNFTDAQNLGLNVGRFQSGKFGFMLLGLPAAALAMWLAAPKQNRQQVFGIYFSAAFTCFLTGITEPIEYTFLFVAPWLFYGVHMPLASIAFWITGALQTHVTQTVSGGFIDYIVFAIVPYFGQKAMTAKSAFAVLGVAVGLAPAYFLSFYFLIKFFNVKTPGRDLMVGETRLFTKADFKASKGLKVDGSKIASVDDKEETRLAKAAAIIEYLGGEENIIDIDSCASRLRLTVVDSSKANIDGIKSLGGSTGALVKGNNIQVVYGGEQEAIKPRMIKILAEQREAKKLNMNVENKAEVKIKENKKVKTAPAKKATSKSSTAKKSASSKTTKK
>NZ_CP007520.1|WP_042733547.1|821417_822542_-|serine-hydrolase
MQFNNVEQIINSFMDRKLFKGAVIRICKNKELIYSKSFGYNDQNNTVLLNGNEIFRAYSMTKPLTAFAVLLLVDKGLISLNDDISKYIPSFKNKNITVWNLLTMTSGITYSGNKTNTQVQIKSILNQWMEEKKDLEWLCDQLSQVELLFEPGKGWYYGLSLDIASRIIEIVTNKTYRDFVKEEIFNKFEMFDSDFYLFDPKREANVFKWSLIDDKPNLELVKDFNFLIQDIYQLPNCPMAGAGLFTTADDYSKFLNVLLDGKFKDQQVISHSLLQEMKTDQLSKNDLKQFFKWNLNADYSYGFGARVRIKNELYPLTEVGEFGWDGLLGSSGLVDSKNNITTTIMLSSFPGHNSTVETEFFDALYKDLRSNNLA
>NZ_CP007520.1|WP_042733546.1|820399_821392_-|hypothetical-protein
MFYYDQNSVLIEIRKKDNLYIIGDQQFDQIPMYVLNSMYTSANWNRALKYFSKEIGDIIGYYMLKLDIYLDFENKDLILLTKQMFFRKIINQKRFKNEFFQKVLDHKHRHRLITDKHKIIDDKFIDKYSPNNYSDILRIPSINRFIVNENIDLDKYRFKDLIVISDKFDFKITNKNQRIYYINKNDLSNYNEFENATFIDLINYKVYVNAVLNWKNKIVLEIEYDDLNNIDLVKNEIIRIFKNNFDTNLNWHLYNLTFDNKYLVEGILKVFENNDFIKSIEILDNSFKELKLNYFAIIFKDDNLINLIRDYIKTDEDLNKFNEIFTRYNY
>NZ_CP007520.1|WP_042733556.1|837632_838133_-|Sua5/YciO/YrdC/YwlC-family-protein
MLKSHEENKAIELLKQNKIIILPTDTIYGLSAVYSLENEREINRIKKADLNKRLIILISNLDQLKDLDIVDQTDKELLLSNDPTTVIFKTKDSSIAVRLVKRQDIKNIINKVGPIISTSVNFHKSEPLKTKIDLENFNKDIVVFFDEQLNGLPSRIYDSINKKYIR
>NZ_CP007520.1|WP_042733557.1|838107_839637_-|hypothetical-protein
MIKNKYISNLKLKLINNKFSMRIKDSNPEIQKRNASIYFRSILAIVVFLLTIMPFYVYVYIIFNDQGLLYYFDHFKTISKHLIELPSKAYIWGYGIVGIIFTFIVLVLFVLFKGIVSVSDNKRYKQVVIVSIVFLSVITILFQTLSQYYYGFYEDFLHYETITGNSDKKIGEMQDIAKWYYDHYSPLSNNAEKLKAFYWISDEKIWWVSFVQFFFMFTISISLQNVVFADNSSNQEDKYVTHFAQKNSLFSGSKFKIYANKIFSYKAKTLSNWVLVTVFVISSSVIFYIVIISTRGPIQSLFKWTYEYPNLLKDMNGFEDKVFNQFKNTLSLEQTSPLTILSFPILVLGITLSTSLFLVSVSIRGQNFSSLSFRSQYIVLLIESILLIISVFVSQLELQRISVAWNTDNMGMNYLKETKQIITANIYNQLVNEYPLNGIDEKIKTIFTNNYVIFSEFTILITSTLVSFAIIGKGIYTKKNIIKEVEQEIENKKFKFLRGYTHAKKSWRK
>NZ_CP007520.1|WP_042733558.1|839649_840498_-|peptide-chain-release-factor-N(5)-glutamine-methyltransferase
MLNIYKVFNNILNNKNISISKADVYAILEYVLKKDYQAIITDLDYQLTNQELEHVDQIIKLLEQKYPLAYIIKSKYFYNNKFYVDNNVLIPRVESEEIINLVYDYVKKNNNLKIIDLCSGSGCLGISLALLNKLNNVLLVDIDTNALNVCKTNINNFNLKNTEILQSDFLENIIKNNIKANVIVCNPPYIDINDDSIAEGVKLYEPNIALFAKDNGLYFYKQLINNIDKVVDINNKFIIVLEFGWNQKTAIEKIINDNCLKYNWEFKKDNYNNWRNLIIKNF
>NZ_CP007520.1|WP_004428928.1|840490_841582_-|peptide-chain-release-factor-1
MNPKTYEALETMQKRLDQINEDLQKEEILKDIKKFTELNKERSNLEEVVEKFIEYKQTQQQIIDAKNILENEKDQELIELAKLELEENSEKIEPLVKIIEEMLLPKDPNDDKNVIVEIRGAAGGDEANIFAGDLLRMYRLYSEKQGWKINIMEASPGEAGGYSQVVFMVKGDRVYSKLKFESGAHRVQRVPKTEAKGRIQTSTATVAVLPEMSEVEIEIKASDLRIDTYRSSGAGGQHVNTTDSAVRITHIPTGVVAASQDGRSQHDNKDIAMTMLRAKIYEAELEKQQAEADATRKNAVGTGARSEKIRTYNYPQNRVTDHRVGLTLNKLDQVMEGNIEEFIIALINEEQRQKVAEQLENNA
>NZ_CP007520.1|WP_042733559.1|841585_842212_-|thymidine-kinase
MNDINEVEMSCSNNKLGWIELITGCMFAGKTEEFIRRLKIMSYAKKNVVVFKPGLDQRYSKQCVASHGGTMLESNIIQKSDDIRKIVEQENLIKKVEVVGIDEVQFLDEGVVDLIDELADQGIIVIVNGLDKDFRCEPFKNVDKLLAIAEFVTKLRARCHVCGNFANRSQRIVNGEPAKWDSPLILVDGKESYEARCRTCYVLPKKGA
>NZ_CP007520.1|WP_042733560.1|842216_843161_-|bifunctional-oligoribonuclease/PAP-phosphatase-NrnA
MLDNKKCEKLVEKIKQYDNIIIAKHKLPDWDAQGSAMGLAYIIEKNFENKKIFVVGERLNDDVDFLNNEISDEFVENSLLITVDTAVKSRIDFDKVELVKEIFKVDHHINVEDYADNDLILDSSIANTEVITLWAMKMNLIIPKKAAHNLYLGLLTDSGRFLYEKTDSQTFIVASKLLEFGADFKKANDYLYVSSLKMRKWMNFAFSKVNITKTGIAYIVLTKEDQKGWDLNYEEIKSCLSTMAGIEEIKIWFTVIEYEDQLKVSFRSRDYEVNKVAEKHNGGGHKLASGARIETLDEIPTLVHELEELMQNGG
>NZ_CP007520.1|WP_042733561.1|843162_845040_-|hypothetical-protein
MSYKFSELTFLTKDPKIERINFTAGDGEIINVVIRQPNKFNFFKRVLLGKEKNKTGRYQIDEIDIVNKRFVKNNVEYIKNNNFFQRLIPAKWVLVLSLLFNTRFLRKASVSYIEEKYNYLSFVASKNESNDLKVRKNIDKVISQFITNSTTTEQKVLNDYLKKLLKYNQKKPLDIFKDFPVQIRVLSKLIENLKVTVRINQLMLMFQQIMWDNIYAFDELRDSCSCEYNIKRSSNRELKKNWRKFTYSQTKYAVGKQLKIIGSKITELRIAIYRDNKKLKQFQKQLDFEFKKYFKQSEISKESYNKVEWAYKNWQKTVEDQLSDIEHKQKEDMLGLLRQECKMIGKQIAYLIHKYHEQILSGNAKYNNKNEFLVLKKYYKDQIKNIFQQASEWMSENVEKYNMKFQWFIKSSFQISSLNIIYIKMLKAINLGKRNIVFSNLTQLLNPKDFDKLTETIKRIRELNPMLTFVFLNDSLRYVPDLSKTIYSVYNNEMQLLSAEDIFDISLEQNILPHYNNLKYKKLENNQVEVENKNWNLENNEISDNGTIYLNPFRVNLSFGGRDNLPIILRLVKSNRFIDKNIYCGVTEYKTKIFFYNKTIQLKNNDKIVVHVDRKSISKIISEEV
>NZ_CP007520.1|WP_004428921.1|845138_845420_-|50S-ribosomal-protein-L31
MPRNDIQPKYFNEAKFVCTTCSNEWVCGTTKAEEIRLDICSNCHPFFTGAQTFVNNAGRVEQFKSKFAKRDSIKAAAEKHSADQKAKNKENKK
>NZ_CP007520.1|WP_042733562.1|845555_846446_-|class-II-fructose-1,6-bisphosphate-aldolase
MPKLYHNRLVNAKQMVKDAHAKKYAIGHFNINNLEWTKAILEAAQASNTPVILGTSEGAIKYMGGVETVVGMVNGLLDFLDITVPVALHLDHGQSVEMAKKCILAGYSSVMFDGSHYPYEQNLEMTKELIKFADEYEVSVEAEIGSIGGEEDGVVGQGELADPKQAEEISKTGIAMLAAGIGNIHGKYPSWWESLSFDTLEKLQQASNMPMVLHGGSGIPQDQVKKAISMGISKINVNTELQLAFRDATRKYVEAGKDLDDNTKGFDPRKLLKPGYEALKSTFLELTEWFGCKGKA
>NZ_CP007520.1|WP_042733563.1|846560_847400_-|hypothetical-protein
MIIKIDDYSNLQWVGIFIGVICLIFGIVLFQLRWSYLIFNKQLKVRKKVFDKLLKIDDYPLLNKKILTSYLTICAGCMLLCLFFVIIIFNLLEKTLIQKISASLLDIFFIKPNGLWWSTTLIFILLISELLSFSILVFYIIKVFKDKNIIAEKNQQKLEQHFKQLKEEFISDSEYKDFKILYNNQNKFISWRTKTSVEYLNKKIQKLKETYINSAEYDFKLAILFVEYIHTWTFLFMITDKKLFKKRENYSVVVNNKDVINLDDLPEILIKNFFTVAYK

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Crispr_ID: NZ_CP007520_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP007520_10

891143-891241

Orphan

Consensus_repeat	Method
TTGATTAAATGATATTGCATCATT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP007520_10

>merge|NZ_CP007520|10|891143-891241|CRISPRCasFinder
TTGATTAAATGATATTGCATCATTAAACATTCTATTCATATCAGTTACATTTGAAGTATCTCAATTGCCTATTTCTTGATTAAATGATATTGCATCTTC

>NZ_CP007520|10|8|891143-891241|CRISPRCasFinder
TTGATTAAATGATATTGCATCATT	AAACATTCTATTCATATCAGTTACATTTGAAGTATCTCAATTGCCTATTTC
TTGATTAAATGATATTGCATCTTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007520.1\|WP_042733587.1\|881516_883436_-\|DNA-polymerase-III-subunit-gamma/tau	unknown	unknown	gnl\|CDD\|274111
NZ_CP007520.1\|WP_036497817.1\|894628_894763_-\|50S-ribosomal-protein-L34	unknown	unknown	gnl\|CDD\|179004
NZ_CP007520.1\|WP_042733584.1\|879558_880302_-\|DNA-polymerase-III-subunit-delta'	unknown	unknown	gnl\|CDD\|379051
NZ_CP007520.1\|WP_042733592.1\|894279_894606_-\|ribonuclease-P-protein-component	unknown	unknown	gnl\|CDD\|376392
NZ_CP007520.1\|WP_042733586.1\|880924_881515_-\|recombination-protein-RecR	unknown	unknown	gnl\|CDD\|234616
NZ_CP007520.1\|WP_042733670.1\|892303_892900_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226180
NZ_CP007520.1\|WP_051067122.1\|893062_894256_-\|membrane-protein-insertase-YidC	unknown	unknown	gnl\|CDD\|235012
NZ_CP007520.1\|WP_042733590.1\|888085_888844_-\|phosphonate-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|131368
NZ_CP007520.1\|WP_042733588.1\|883694_884138_-\|nucleoside-deaminase	unknown	unknown	gnl\|CDD\|238612
NZ_CP007520.1\|WP_042733589.1\|885410_888086_-\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|273441
NZ_CP007520.1\|WP_042733585.1\|880303_880921_-\|dTMP-kinase	unknown	unknown	gnl\|CDD\|234814
NZ_CP007520.1\|WP_052491430.1\|884274_885390_-\|DNA-recombination-protein-RmuC	unknown	unknown	gnl\|CDD\|376878
NZ_CP007520.1\|WP_042733583.1\|878836_879559_-\|methyltransferase	unknown	unknown	gnl\|CDD\|226608
NZ_CP007520.1\|WP_042733591.1\|888855_890151_-\|PhnD/SsuA/transferrin-family-substrate-binding-protein	unknown	unknown	gnl\|CDD\|379006

Protein	Function_ID	Function_description	E-value
NZ_CP007520.1\|WP_042733587.1\|881516_883436_-\|DNA-polymerase-III-subunit-gamma/tau	gnl\|CDD\|274111	TIGR02397, DNA_polymerase_III_subunit_gamma, DNA polymerase III, subunit gamma and tau. This model represents the well-conserved first ~ 365 amino acids of the translation of the dnaX gene. The full-length product of the dnaX gene in the model bacterium E. coli is the DNA polymerase III tau subunit. A translational frameshift leads to early termination and a truncated protein subunit gamma, about 1/3 shorter than tau and present in roughly equal amounts. This frameshift mechanism is not necessarily universal for species with DNA polymerase III but appears conserved in the exterme thermophile Thermus thermophilis. [DNA metabolism, DNA replication, recombination, and repair].	2.29528e-136
NZ_CP007520.1\|WP_036497817.1\|894628_894763_-\|50S-ribosomal-protein-L34	gnl\|CDD\|179004	PRK00399, rpmH, 50S ribosomal protein L34; Reviewed.	2.55322e-13
NZ_CP007520.1\|WP_042733584.1\|879558_880302_-\|DNA-polymerase-III-subunit-delta'	gnl\|CDD\|379051	pfam13177, DNA_pol3_delta2, DNA polymerase III, delta subunit. DNA polymerase III, delta subunit (EC 2.7.7.7) is required for, along with delta' subunit, the assembly of the processivity factor beta(2) onto primed DNA in the DNA polymerase III holoenzyme-catalyzed reaction. The delta subunit is also known as HolA.	7.31183e-26
NZ_CP007520.1\|WP_042733592.1\|894279_894606_-\|ribonuclease-P-protein-component	gnl\|CDD\|376392	pfam00825, Ribonuclease_P, Ribonuclease P.	8.20515e-27
NZ_CP007520.1\|WP_042733586.1\|880924_881515_-\|recombination-protein-RecR	gnl\|CDD\|234616	PRK00076, recR, recombination protein RecR; Reviewed.	5.23554e-62
NZ_CP007520.1\|WP_042733670.1\|892303_892900_-\|hypothetical-protein	gnl\|CDD\|226180	COG3654, Doc, Prophage maintenance system killer protein [General function prediction only].	4.1749e-06
NZ_CP007520.1\|WP_051067122.1\|893062_894256_-\|membrane-protein-insertase-YidC	gnl\|CDD\|235012	PRK02201, PRK02201, putative inner membrane protein translocase component YidC; Provisional.	1.16042e-130
NZ_CP007520.1\|WP_042733590.1\|888085_888844_-\|phosphonate-ABC-transporter-ATP-binding-protein	gnl\|CDD\|131368	TIGR02315, Phosphonates_import_ATP-binding_protein_PhnC, phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates. [Transport and binding proteins, Anions].	3.32822e-121
NZ_CP007520.1\|WP_042733588.1\|883694_884138_-\|nucleoside-deaminase	gnl\|CDD\|238612	cd01285, nucleoside_deaminase, Nucleoside deaminases include adenosine, guanine and cytosine deaminases. These enzymes are Zn dependent and catalyze the deamination of nucleosides. The zinc ion in the active site plays a central role in the proposed catalytic mechanism, activating a water molecule to form a hydroxide ion that performs a nucleophilic attack on the substrate. The functional enzyme is a homodimer. Cytosine deaminase catalyzes the deamination of cytosine to uracil and ammonia and is a member of the pyrimidine salvage pathway. Cytosine deaminase is found in bacteria and fungi but is not present in mammals; for this reason, the enzyme is currently of interest for antimicrobial drug design and gene therapy applications against tumors. Some members of this family are tRNA-specific adenosine deaminases that generate inosine at the first position of their anticodon (position 34) of specific tRNAs; this modification is thought to enlarge the codon recognition capacity during protein synthesis. Other members of the family are guanine deaminases which deaminate guanine to xanthine as part of the utilization of guanine as a nitrogen source.	1.18083e-28
NZ_CP007520.1\|WP_042733589.1\|885410_888086_-\|ABC-transporter-permease-subunit	gnl\|CDD\|273441	TIGR01097, PhnE, phosphonate ABC transporter, permease protein PhnE. Phosphonates are a class of compound analogous to organic phosphates, but in which the C-O-P linkage is replaced by a direct, stable C-P bond. Some bacteria can utilize phosphonates as a source of phosphorus. This family consists of permease proteins of known or predicted phosphonate ABC transporters. Often this protein is found as a duplicated pair, occasionally as a fused pair. Certain "second" copies score in between the trusted and noise cutoff and should be considered true hits (by context). [Transport and binding proteins, Anions].	7.87341e-53
NZ_CP007520.1\|WP_042733585.1\|880303_880921_-\|dTMP-kinase	gnl\|CDD\|234814	PRK00698, tmk, thymidylate kinase; Validated.	6.58682e-89
NZ_CP007520.1\|WP_052491430.1\|884274_885390_-\|DNA-recombination-protein-RmuC	gnl\|CDD\|376878	pfam02646, RmuC, RmuC family. This family contains several bacterial RmuC DNA recombination proteins. The function of the RMUC protein is unknown but it is suspected that it is either a structural protein that protects DNA against nuclease action, or is itself involved in DNA cleavage at the regions of DNA secondary structures.	7.52739e-41
NZ_CP007520.1\|WP_042733583.1\|878836_879559_-\|methyltransferase	gnl\|CDD\|226608	COG4123, COG4123, Predicted O-methyltransferase [General function prediction only].	1.05387e-75
NZ_CP007520.1\|WP_042733591.1\|888855_890151_-\|PhnD/SsuA/transferrin-family-substrate-binding-protein	gnl\|CDD\|379006	pfam12974, Phosphonate-bd, ABC transporter, phosphonate, periplasmic substrate-binding protein. This is a family of periplasmic proteins which are part of the transport system for alkylphosphonate uptake.	7.54644e-06

>NZ_CP007520.1|WP_042733591.1|888855_890151_-|PhnD/SsuA/transferrin-family-substrate-binding-protein
MKKLISIISSIGLVATSSLAVVSCRTPKLEILFVPSRSGTDITAQVAPLRGLLTKKLKELAKARGEEFNKAVKVDVSTSYSAAAKSLAGGSVDIALMSIQPYAENRGEKQEDGTYDKIGFLLSSGRRGAKPYTTFEGFQGEDKKFSNDKAISDLKGEDLFGLANWYQKYATDHKPAEGKSYATILEDDTIPASYYRSYVYANTSVLSQTIYKDQKSYKAALDEAKQSNNFDNYKQIIKSLLLESNIKIALGDKKSSAGFSYPVLWMKETAGLTNEQIVDLFKNGKKFIKGSDYDKIASTIGDNAEAKAGNGYAIGFGFSDIRFTRTGKLDHEKKLFENTEIIGASQAIINDGIMYSKNKKSLVGKDLDLLKDIKTGLLSLIKEDKEAKKVFSIYNITNFVEPDATKIDSDITDSLKKLDDVSKIANAITWA
>NZ_CP007520.1|WP_042733590.1|888085_888844_-|phosphonate-ABC-transporter-ATP-binding-protein
MIVFKNVNKIWPNGKQVLKDINLTISKGELIAVIGLSGAGKTTLLKTINKLNDISSGNIEIEFDKINKKYDLSKTRGKKLRELRSNIGLMFQEYNNIGNKTVLENVLNSRITKEKPLNKVLGIFSKQSKLIALESLNKLNLLDFAYIRAENLSGGQQQRVALARTLSQQPFLIIADEPVSALDPVMANQVMKDFQKINEEEGITTIINIHHVDLAKKYATRIIGLNNGEIVFDGTPDQLSDEKIKEIYGDNY
>NZ_CP007520.1|WP_042733589.1|885410_888086_-|ABC-transporter-permease-subunit
MFLKNKTFKVGNSFSKRPKKVFSISFIVTTIAILLLGFILLESDWPKFFDNIDKLGELFKDFFKWDFEDWSKTKLGAESFLNSSIKLLIQTLTYSFFGTFIGVILCLPVALLAARSIIKNNFVNQAARLFLSILRTIPTFAFAIIIKGFFDTASSAIAVGVMFFSFSVAGKMFFEKIEQIDVKIYTSLQVTGITRIQAFRKAVIPQISRDLLSISLYTLEINIRYLSIIGTAVGVTSFGSLITVAIDSNEYNKVGFLLTIFSSVILMIEVLIILVKKYVLEDRDQVLEYKIINKSVKAIKKINDTNPLDFYVNYILVKDIDEKISQLTNKNEIQELKKIRKQKIKEYIKEHKTNVQQDKLEYKSLLKNTDNDLFIKLDSIDQTVRIDQKTTAKLNFLVLKTKEELKKQIDITTKQELKEFRDNLTVEQTLKSARKNYIKRLIFGIILISLFIYSSTTIDLKFASSQQVKNTGNVILEILNINWSSLIFKDVAHSVQDPVILLLWEALSMAIVGTFIGSIIAYILGLLSSSKVTNKYVAFPFMFITTVMRSIPTYMYAYIFIFVVGFGQFPGMLALVMGTIGMLTKYNREIYEKINMKIIYQLKSMGLNWWHVFRYGIVAQTKDETISYIIYRFELNFKEVAALGVVNAGKIGFTMNAYFSGRLFAEFGAVIFGLVIFTLIIENISTSLRQKFLEDKNLKFIDWIINKYRHFKFPVYKAKLKLFNKELTTSYFEAEAFNSYVKQEKWIDALIKDGQTKQDIYNQLKDYEKEFRMFRENMVSNINDKTKQDLETAKTNYTHTLNNLKQEFVIKKQQLNEFKLETQNQIKLLDNQEISNDQKHDQINDLKAKYNLEKQELINIKNLIRHLKHDYKKTKLYSKQIRKIKLLNLDY
>NZ_CP007520.1|WP_052491430.1|884274_885390_-|DNA-recombination-protein-RmuC
MDAWIIVIIIIGIVTLAITLFFVIRTIKRNGFDYPVGSRAFDKQIQIIISKLEAIEKIDATNFENVRKSVNDQKTDISNVIKDLNDSIKNLNDNNTKQMSRIDTVVIDSKTKLDNLSSIFTNSKNRGNVGEFTLEWILSNILGEESEHSIWQREYKYENKPGLRIDAVIHTGINNKKLAIDSKFPMIDAEVLLTKDPNDFEYKQKEKNFRTSLISKISEVEKYIDKKEGVDNVIMYIPSQVVFELILTKFEDIYQKALNKKIFLTSPTTLPIVLHSQQMAIRDYKISKDIHKVKDLVEGVLIDFQKWDERNQKLKKAFNDYVQKTNSTFEDLEKSTNKINSKIEKIQSIDTTNQNSVKKESDDDSIGIHWK
>NZ_CP007520.1|WP_042733588.1|883694_884138_-|nucleoside-deaminase
MKEFDQLLDLLINESKKALVHDDIPVSACVVDSNNNIVSLSYNTKQKDKNISSHAEINAINLAIKKTNNMNLSEYKIITTLEPCQMCYGAIDQVKIKDIYFLVDSIKYGITNKYSINDININLIQIKNRVKEDEYKNILNNFFAKKR
>NZ_CP007520.1|WP_042733587.1|881516_883436_-|DNA-polymerase-III-subunit-gamma/tau
METNKQSLYRVYRPKDFNSVAGHKNVIEILKKQISDNKIGHALLFAGQRGTGKTSVARIFAKTINCLNLIESKACDKCSNCIMANENRSSDIIEIDAASNNGVDEIRDIKNSVATLPLNSRYKIYIIDEVHMLTKQAFNALLKTLEEPPMHAVFILATTEFSKIPQTILSRCQIFNFSKIDKQSLTNRLNFITTQEGYEIDKETLDEVYYLSEGSLRDAINIIEQLILVSDKKITINNLKSIFLIATKKEQLQIVKSTLNNNSEFIISYFEKANNQGMNWDVFALGIIEIIKEIVEYKLTNNLDFLNVLTRDDVVQFNDFNIKDIFKLADNLADAYSKTKNSNISYNYLLLSLLKSLNTQTTVVKNNDNFIEIQAKNNDIKPIENDIEIEQIILETKEINKISEEEKTVFIEQESIEIQNLDEEDFTAFVETKINVIDDQLNDKECFKLIELKSKLNSYLLDLISMKNNSSIDNMDLINFLSGTKQFKDEKIKVDKLFSDLFATDEFDNLINKDHANNLYMLLDTKLMALTDSVIILKTQSNSHANLINNLMLDEKVLNNIYSWFKKHYFIFAIDDNKKDEIMMIFKDLKSKNKLSDYKEKTFEEIKNKYVKNNKEVSLNKELIQKAKALFDDDFIIGD
>NZ_CP007520.1|WP_042733586.1|880924_881515_-|recombination-protein-RecR
MSDILFDQIVDIVKNNKGLTKKTTQRLLVDLLINPNNLDQLINQLNTLKQNISLCPICSYLAENNQCLVCSLSSRDQNLICVVSSILDAKNIEDINKFKGVYHILNGEIDLNKNIPPYKLNINRLLERINKNTEVILALNATYQGEVTANYLNQLLSEKNIKVTRIAKGIPMGASLDYMDEFTLESAFNNRKKYGE
>NZ_CP007520.1|WP_042733585.1|880303_880921_-|dTMP-kinase
MFITFEGIDGSGKTTAILKAKEELEKKGYKVLVTREPGGERIAEQLRQIILDNKNESMHSWTEALLFIAARKEHLEKVIKPALQKGMIVISDRFMDSTSAYQGNARNIGVENVDHIQAIILGECKPDLTLFFDIKPEVAEKRMNIRGEEIKNRLDKEKMDFKEKVYQGYKTLMKNNPERIKQVDASKSIEEVSDQVLKLILEKIK
>NZ_CP007520.1|WP_042733584.1|879558_880302_-|DNA-polymerase-III-subunit-delta'
MKKEQIIKRLKKMVDDHNLFSNTILNSNDNQISMDTVSEIISYMFCCNSNHSDFDQVKKQILENKNIDVLQIGDGHSAISNQQVHELIEKMSMSSIGEQNIKFFIIKNAENLKNTSANSILKFLEEPPVNTYGFLLTNNYSEIITTILSRCQLINIDNEQKIDEQLNIFEELLIKKNKEEILLFGSKLKSMNRNDQIKLISDAYHRTIVHKFFNCIEATLEVLDDLKFLPITNISIDNYLIRIVEEI
>NZ_CP007520.1|WP_042733583.1|878836_879559_-|methyltransferase
MKVLNDLLGYKNRKLYQHNKMFNFTLDSILVARFANLTSKRKMIADFGTNNAVIPLVLSKYTNAKIVGVEIQQQAVEIARENVELNNLNNQIEIVCSDIKEFAKTHNQVFDLIVCNPPFFKMDGKPKLKEISQEVVNARHEVLITLEEIIYCASKCLKNKGNFTIVHRAERTGEIINLFYKYNIFPKRMMLVQSKADQEAKTVLIDGIYQGNEGMQILPTLVTHNSDETYTDELLKYFHD
>NZ_CP007520.1|WP_042733670.1|892303_892900_-|hypothetical-protein
MKKFPFNEDFAEAVGILCMDANDEAARIGDHKEVYFQKPEGGALSLVNFWIKKWAFQRGANFTNLAADIIFDLSTKNKFTDGNKRTALLTVLYFFKMSGFWVVQPNPVDYWDKLIENVVEEFEQSKDPEEIKQKLREQILENLVSVDPKYEDVTEETEIDPESEIITAEYVKSNMRLWQQEVREDEVIMESLKRLSVK
>NZ_CP007520.1|WP_051067122.1|893062_894256_-|membrane-protein-insertase-YidC
MYKQSNRVMNYLNPEKSKKNKQPKDIFKIVIKWLKIIGFLFILVSMLWGCVQMYQSQYTVNQIVDMTGKTVYAPGVSFEIILNSLGETGEKVHHFAIQNGKLVEYGYNSINSWGEAFSKTESPFYGFFVYPTAWVLSGLIKLFSGTLNPSLDDKTQLSYGISSVASIFLTVLIIRGLTLLMGFKSQINQHKMQDIQLKVAEIQAKYKDKKDMQSRQKQQAEIQAAYQREGMSQFSSLAGSFAPLPFLFAIYAIVRSTRSLKIATLGPIALIEGPWQQITQGNYIYILIIGIYLPLQAVSMLLPTLLQMKRQKAISLTEAQKKARKKQLITQLVMMVVFVIVILSVATGVCIYWIFSSIFQIIQTYGFYKYNEKHTKAGNQERQRRLRQQERIKLNNK
>NZ_CP007520.1|WP_042733592.1|894279_894606_-|ribonuclease-P-protein-component
MKNKRIIKKNFEFQDIISTKNSIKNLCFVIYYRSNDKGYLRYGISVGKKIGNAVVRNKVKRQIRMLINNNINLFGEKPFDIIILARKPILDIKFETTSNSFKKIINKL
>NZ_CP007520.1|WP_036497817.1|894628_894763_-|50S-ribosomal-protein-L34
MKRTWQPSKIKHARVHGFRARMATKNGRKVINARRAKGRAKLSA

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

718018 : 727507

Bacillus_phage(50.0%)

transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_042733479.1\|718018_718915_-	guanylate kinase	S4VT50	Pandoravirus	1.2e-07	37.6
WP_042733480.1\|718919_719489_-	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA
WP_042733481.1\|719566_720169_+	peptide deformylase	E3SLL2	Synechococcus_phage	3.7e-08	35.7
WP_042733154.1\|720259_721540_+\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	8.1e-21	29.9
WP_042733482.1\|721595_722531_-	ATP-binding protein	A0A075KJB7	Lactobacillus_phage	3.9e-12	28.8
WP_042733483.1\|722540_723776_-	DnaD domain protein	NA	NA	NA	NA
WP_042733484.1\|723941_724769_-	DNA-formamidopyrimidine glycosylase	A0A127AWE5	Bacillus_phage	2.1e-17	24.3
WP_042733485.1\|724777_727507_-	DNA polymerase I	A0A142F1Q9	Bacillus_phage	6.3e-47	28.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP007520

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection