CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP007471	Haemophilus influenzae strain C486, complete genome	2 crisprs	DinG,DEDDh,cas3,WYL	0	1	5	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP007471_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP007471_1

713677-713756

Orphan

Consensus_repeat	Method
AATTTTCCCTTCATTGATAACTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP007471_1

>merge|NZ_CP007471|1|713677-713756|CRISPRCasFinder
AATTTTCCCTTCATTGATAACTTCATCGCCATTAAGTACCACGAAATCTTTCGCCTTAATTTCCCCTTCATTGATAACTT

>NZ_CP007471|1|1|713677-713756|CRISPRCasFinder
AATTTTCCCTTCATTGATAACTT	CATCGCCATTAAGTACCACGAAATCTTTCGCCTT
AATTTCCCCTTCATTGATAACTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007471.1\|WP_005663931.1\|706266_707112_-\|RNA-polymerase-sigma-factor-RpoH	unknown	unknown	gnl\|CDD\|235838
NZ_CP007471.1\|WP_044345436.1\|719658_720384_+\|3-deoxy-D-manno-octulosonic-acid-kinase	unknown	unknown	gnl\|CDD\|234975
NZ_CP007471.1\|WP_005668897.1\|707249_707561_-\|DUF2322-family-protein	unknown	unknown	gnl\|CDD\|370810
NZ_CP007471.1\|WP_005692198.1\|724004_724901_-\|4-hydroxy-tetrahydrodipicolinate-synthase	unknown	unknown	gnl\|CDD\|235107
NZ_CP007471.1\|WP_042603014.1\|707585_708611_-\|UDP-N-acetylmuramate-dehydrogenase	unknown	unknown	gnl\|CDD\|234593
NZ_CP007471.1\|WP_044345428.1\|710364_710964_-\|glycerol-3-phosphate-1-O-acyltransferase-PlsY	unknown	unknown	gnl\|CDD\|234691
NZ_CP007471.1\|WP_005653397.1\|722751_723075_-\|ribosome-associated-translation-inhibitor-RaiA	unknown	unknown	gnl\|CDD\|182378
NZ_CP007471.1\|WP_042593467.1\|721141_722038_+\|glycosyltransferase-family-8-protein	unknown	unknown	gnl\|CDD\|133037
NZ_CP007471.1\|WP_042603012.1\|720395_720983_+\|RdgB/HAM1-family-non-canonical-purine-NTP-pyrophosphatase	unknown	unknown	gnl\|CDD\|234648
NZ_CP007471.1\|WP_005686687.1\|711046_711403_+\|dihydroneopterin-aldolase	unknown	unknown	gnl\|CDD\|183219
NZ_CP007471.1\|WP_005653400.1\|725001_725469_+\|thioredoxin-dependent-thiol-peroxidase	unknown	unknown	gnl\|CDD\|181857
NZ_CP007471.1\|WP_044345434.1\|718538_719582_-\|glycosyl-transferase	unknown	unknown	gnl\|CDD\|366450
NZ_CP007471.1\|WP_044345432.1\|716021_718217_-\|TonB-dependent-hemoglobin/transferrin/lactoferrin-family-receptor	unknown	unknown	gnl\|CDD\|273807
NZ_CP007471.1\|WP_044345440.1\|723264_723894_-\|outer-membrane-protein-assembly-factor-BamC	unknown	unknown	gnl\|CDD\|225854
NZ_CP007471.1\|WP_005686695.1\|704428_705295_+\|co-chaperone-DjlA	unknown	unknown	gnl\|CDD\|236512
NZ_CP007471.1\|WP_005686697.1\|703708_704350_+\|orotate-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|234771
NZ_CP007471.1\|WP_005663925.1\|702968_703685_+\|ribonuclease-PH	unknown	unknown	gnl\|CDD\|178914
NZ_CP007471.1\|WP_044345425.1\|708620_710324_-\|nitrate/nitrite-two-component-system-sensor-histidine-kinase-NarQ	unknown	unknown	gnl\|CDD\|236800
NZ_CP007471.1\|WP_050951492.1\|714251_715946_-\|ShlB/FhaC/HecB-family-hemolysin-secretion/activation-protein	unknown	unknown	gnl\|CDD\|225387
NZ_CP007471.1\|WP_005686693.1\|705294_706227_+\|tRNA-dihydrouridine(16)-synthase-DusC	unknown	unknown	gnl\|CDD\|236713

Protein	Function_ID	Function_description	E-value
NZ_CP007471.1\|WP_005663931.1\|706266_707112_-\|RNA-polymerase-sigma-factor-RpoH	gnl\|CDD\|235838	PRK06596, PRK06596, RNA polymerase factor sigma-32; Reviewed.	0
NZ_CP007471.1\|WP_044345436.1\|719658_720384_+\|3-deoxy-D-manno-octulosonic-acid-kinase	gnl\|CDD\|234975	PRK01723, PRK01723, 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed.	3.34865e-130
NZ_CP007471.1\|WP_005668897.1\|707249_707561_-\|DUF2322-family-protein	gnl\|CDD\|370810	pfam10084, DUF2322, Uncharacterized protein conserved in bacteria (DUF2322). Members of this family of hypothetical bacterial proteins have no known function.	9.57828e-48
NZ_CP007471.1\|WP_005692198.1\|724004_724901_-\|4-hydroxy-tetrahydrodipicolinate-synthase	gnl\|CDD\|235107	PRK03170, PRK03170, dihydrodipicolinate synthase; Provisional.	9.61319e-174
NZ_CP007471.1\|WP_042603014.1\|707585_708611_-\|UDP-N-acetylmuramate-dehydrogenase	gnl\|CDD\|234593	PRK00046, murB, UDP-N-acetylmuramate dehydrogenase.	0
NZ_CP007471.1\|WP_044345428.1\|710364_710964_-\|glycerol-3-phosphate-1-O-acyltransferase-PlsY	gnl\|CDD\|234691	PRK00220, PRK00220, glycerol-3-phosphate 1-O-acyltransferase PlsY.	3.43813e-101
NZ_CP007471.1\|WP_005653397.1\|722751_723075_-\|ribosome-associated-translation-inhibitor-RaiA	gnl\|CDD\|182378	PRK10324, PRK10324, ribosome-associated translation inhibitor RaiA.	8.6757e-42
NZ_CP007471.1\|WP_042593467.1\|721141_722038_+\|glycosyltransferase-family-8-protein	gnl\|CDD\|133037	cd04194, GT8_A4GalT_like, A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune system of host cells. In E. coli, the three alpha-1,2-glycosyltransferases, that are involved in the synthesis of the outer core region of the LPS, are all members of this family. The three enzymes share 40 % of sequence identity, but have different sugar donor or acceptor specificities, representing the structural diversity of LPS.	7.14771e-86
NZ_CP007471.1\|WP_042603012.1\|720395_720983_+\|RdgB/HAM1-family-non-canonical-purine-NTP-pyrophosphatase	gnl\|CDD\|234648	PRK00120, PRK00120, dITP/XTP pyrophosphatase; Reviewed.	2.68767e-114
NZ_CP007471.1\|WP_005686687.1\|711046_711403_+\|dihydroneopterin-aldolase	gnl\|CDD\|183219	PRK11593, folB, bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase.	1.25571e-52
NZ_CP007471.1\|WP_005653400.1\|725001_725469_+\|thioredoxin-dependent-thiol-peroxidase	gnl\|CDD\|181857	PRK09437, bcp, thioredoxin-dependent thiol peroxidase; Reviewed.	1.04613e-113
NZ_CP007471.1\|WP_044345434.1\|718538_719582_-\|glycosyl-transferase	gnl\|CDD\|366450	pfam01075, Glyco_transf_9, Glycosyltransferase family 9 (heptosyltransferase). Members of this family belong to glycosyltransferase family 9. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. All of these enzymes transfer heptose to the lipopolysaccharide core.	7.26479e-98
NZ_CP007471.1\|WP_044345432.1\|716021_718217_-\|TonB-dependent-hemoglobin/transferrin/lactoferrin-family-receptor	gnl\|CDD\|273807	TIGR01785, Heme/hemopexin_utilization_protein_C, TonB-dependent heme/hemoglobin receptor family protein. This model represents the TonB-dependent outer membrane heme/hemoglobin receptor/transporter found in bacteria which live in contact with animals (which contain hemoglobin or other heme-bearing globins) or legumes (which contain leghemoglobin). Some species having hits to this model such as Nostoc, Caulobacter and Chlorobium do not have an obvious source of hemoglobin-like proteins in their biological niche and so the possibility exists that they act on some other substance. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins].	0
NZ_CP007471.1\|WP_044345440.1\|723264_723894_-\|outer-membrane-protein-assembly-factor-BamC	gnl\|CDD\|225854	COG3317, NlpB, Uncharacterized lipoprotein [Cell envelope biogenesis, outer membrane].	2.71545e-79
NZ_CP007471.1\|WP_005686695.1\|704428_705295_+\|co-chaperone-DjlA	gnl\|CDD\|236512	PRK09430, djlA, co-chaperone DjlA.	4.42894e-157
NZ_CP007471.1\|WP_005686697.1\|703708_704350_+\|orotate-phosphoribosyltransferase	gnl\|CDD\|234771	PRK00455, pyrE, orotate phosphoribosyltransferase; Validated.	3.0683e-88
NZ_CP007471.1\|WP_005663925.1\|702968_703685_+\|ribonuclease-PH	gnl\|CDD\|178914	PRK00173, rph, ribonuclease PH; Reviewed.	9.01315e-180
NZ_CP007471.1\|WP_044345425.1\|708620_710324_-\|nitrate/nitrite-two-component-system-sensor-histidine-kinase-NarQ	gnl\|CDD\|236800	PRK10935, PRK10935, nitrate/nitrite two-component system sensor histidine kinase NarQ.	0
NZ_CP007471.1\|WP_050951492.1\|714251_715946_-\|ShlB/FhaC/HecB-family-hemolysin-secretion/activation-protein	gnl\|CDD\|225387	COG2831, FhaC, Hemolysin activation/secretion protein [Intracellular trafficking and secretion].	8.05324e-127
NZ_CP007471.1\|WP_005686693.1\|705294_706227_+\|tRNA-dihydrouridine(16)-synthase-DusC	gnl\|CDD\|236713	PRK10550, PRK10550, tRNA dihydrouridine(16) synthase DusC.	0

>NZ_CP007471.1|WP_005686687.1|711046_711403_+|dihydroneopterin-aldolase
MDRIFIEELTVFAQIGVYDWEQQIKQKLVFDLEMAWDCKQAAETDDVAYCLNYAEVSQVIIDYVESKPFLLIERVAYEVADLLESRYQLQGLKIKLSKPKAVAQARNVGVLVIRGCLK
>NZ_CP007471.1|WP_044345428.1|710364_710964_-|glycerol-3-phosphate-1-O-acyltransferase-PlsY
MSLFALFYMLFAYLLGSVSSAILICRIAGLPDPRQNGSHNPGATNVLRIGNRKSALAVLIFDMLKGMIPVWAGYYLGLTQFELGMVALGACLGHIFPIFFQFKGGKGVATAFGAIAPISWAVAGSMFDTWIFVFLVSGYSSLSAVISALLVPFYVWWFKPEFTFPVALVCCLLIYRHHDNIQRLWRGQEDKVWAKFKKK
>NZ_CP007471.1|WP_044345425.1|708620_710324_-|nitrate/nitrite-two-component-system-sensor-histidine-kinase-NarQ
MYTKGSVSTRIAKYLFIILIVAGVISSLSLAIMSSNKYDAEAINISGSLRMQSYRLLYEMQDQPESVETNLRRYHISLHSSALLEVQNQFFTPNVLKHSYQNILQRWTNMEKYARQQDVKNYSKQLTNYVADVDYFVFELQRFSEQKWILGVSVLGFAMLLILLMVSYVIWYTNREVVKPLHLMTKASMQVQMRQFNHIPLDTRKQNELGTLARVFTQMSTELGQLYSRLEEAVNEKTQKLRQTNRTLSTLYQSAQLLNTNTINDKILNQVLNYIFISNHLNFVKVEVMGAEHWDITLGKQDANNELQIETLSVDNEELGVLSWQAGLPCPDPRIMQNLAQMLARALYFHKNLRQKEQILLMEERSIIARELHDSLAQVLSFLQIQLTLLKHNLKKEDEQSKEKSLAIIANFEQALSGGYAQLRELLATFRLTIQEANLQLALEQVIDSLRSQTTMQMNVNCQLPSQSLNPQQLVHVLQIVREATTNAIKHSQGTVIEISARINAEGEYEILVEDDGVGIPNLEEPEGHYGLNIMAERCRQLNAQLHIHRREQGGTQVKITLPHTLY
>NZ_CP007471.1|WP_042603014.1|707585_708611_-|UDP-N-acetylmuramate-dehydrogenase
MQNLQPFHTFHIQSNAREIIEAHSIEQLQQVWANSKSENLPTLFLGQGSNVLFLDDFNGIVILNRLMGITHEQDANFHYLHVNSGENWHKLVEWSINNGIYGLENLALIPGCAGSAPIQNIGAYGVEFKDVCDYVEVLNLNTNETFRLDTEQCEFGYRESIFKHRYQQGYVITAVGLKLKKDWQPILKYGSLVEFDPKTVTAKQIFDEVCHIRQSKLPDPNEVGNAGSFFKNPVVSLEHFEKIKKHHENLPHFPQADGSVKLAAGWLIDQCNLKGFQIGGAAVHEKQALVLINKSRATGQDVVKLAHHVRQTVAEKFGVYLQPEVRFISATGEVNSEQIIT
>NZ_CP007471.1|WP_005668897.1|707249_707561_-|DUF2322-family-protein
MNFKEILEILPKIDHLTGLNVMNGETIIHNIPAIQGKLGSLRLYNALAEKFNGKLNRTSAQQGVEWFAEHVEDAKANPGKHPNIDLLFKVIDENLNLTLIPLC
>NZ_CP007471.1|WP_005663931.1|706266_707112_-|RNA-polymerase-sigma-factor-RpoH
MDKETQMMLVPQGSIEGYIRAANEYPMLTAEEEKELAERLYYHEDLDAAKKLILSHLRFVIHVARGYSGYGLPQADLIQEGNIGLMKAVKRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWFNENEVDMVANELGVSKEDVIEMESRMSGADVGFDLPTDDAETETYSPALYLEDKSSNFAAALENENFESQATEQLGAALQSLDARSQDIIKARWLDDNKATLHDLAAKYNVSAERIRQLETNALKKLKSAVNF
>NZ_CP007471.1|WP_005686693.1|705294_706227_+|tRNA-dihydrouridine(16)-synthase-DusC
MRVILAPMQGVLDPFVRELLTEVNDYDLCITEFVRVVDQLLPEKVFYRLCPELKNQGFTSSGTPVRVQLLGQHPECLAENAIRAIDLGSHGVDLNCGCPSKTVNGSNGGAALLKQPELIYRATQALRQAVPSEFPVSVKVRLGWDDISQAFEIADAVEQGGVTEITVHGRTKADGYRADRINWKKISEVRERLSIPVIANGEIWHWQDGQDCLSQTGCQDLMVGRGALNIPNLSHVLKSNVEKMPWYEIQKILQKYANVENEYDSGFYHVARIKQWLRYLNKEYDEANQVFDKIKTCQTAEDLKLRLNDK
>NZ_CP007471.1|WP_005686695.1|704428_705295_+|co-chaperone-DjlA
MGFIGKIIGVFLGWKVGGFFGAIAGLILGSIADKKLYELGSVSSSFFKKKTTRQDLFMQTTFAVLGHLSKSKGRVTEEDIQLANQLMIQLKLDDAGRKLAQDAFRRGKESDFPIRQVIREFRIGCGQRADLLRMFLQVQVQAAFADSELHENEKEVLYVIAEELGLSRMQFEQMIAMEMAARAFTQGGFYQQYQQGAYQGGYQYQQQNSGGYQHASGPTLNDAYKVLGVTESDEQSTVKRAYRRLMNEHHPDKLVAKGLPPEMMEMAKEKTQQIQAAYDLICKAKGWK
>NZ_CP007471.1|WP_005686697.1|703708_704350_+|orotate-phosphoribosyltransferase
MEQYKRDFIEFALSRNVLKFGEFTLKSGRKSPYFFNAGLFNTGADLARLGEFYAAAIQASAVDFDVVFGPAYKGIPIGTSVSVALFNRYGIDKPVCFNRKEVKDHGEGGNLIGSPLQGKILLVDDVITAGTAIRESMELISANQAELAAVLIALNRKERGKGELSAIQEVERDYQCQVLSIIDLDDLMQFIEQDPRYSSHLPEMRAYRAEFGV
>NZ_CP007471.1|WP_005663925.1|702968_703685_+|ribonuclease-PH
MRPNNRENNQPRQIKITRNYTKHAEGSVLVEFGDTKVLCTATVEDAVPRFLKGQGQGWVTAEYGMLPRSTHSRMQREAAKGKQGGRTMEIQRLIARSLRAMVDLKALGERAITLDCDVIQADGGTRTASITGAAVALCDAINSLIENGTLKTNPIKGLVSAISVGIVDGQAVCDLEYVEDSAAETDMNVVMMEDGRMIEVQGTAEGEPFSHEELLTLLDLAKQGCNQIFIAQREALGL
>NZ_CP007471.1|WP_050951492.1|714251_715946_-|ShlB/FhaC/HecB-family-hemolysin-secretion/activation-protein
MKMRPRYSVIASAVSLGFVLSNSVMALVPNAGSLNRELEQRQIQPEAKPSGELFNQAAKSPYTAQYKQELKFPLTQVQILDRNNQEVAADELAHILKNYVGKEVSLSDLSNLANEISEFYRHNNYLVAKAILPPQEIEHGTVKILLLKGNVGEIRLQNHSALSNKFVSRLSNTTVNTSEFILKDELEKFALTINDVPGVNAGLQLSAGKKAGEANLLIKINDAKRFSGYVSVDNQGNKYTGRYRLAAGTKVNNLTGWGDELKLDLLSSNQANLKNARIDYSSLIDGYSTRFGVTANYLDYKLGGNFKSLQSQGHSHTLGAYLLHPTIRTPNFRLSTKVSFNHQNLTDKQQAVNVKQKRKINSLTAGIDGSWNLIKDGTTYFSLSTLFGNLANQTSEKKHNAVENFQPKSHFTVYNYRLSHEQILPKSFAFNIGINGQFADKTLESSQKMLLGGLSGVRGHQAGAASVDEGHLIQTEFKHYLPVFSQSVLVSSLFYDYGFGKSYKNSQFLAPGVKNNVKLQSVGAGLSFSDAGSYAINVSVAKPLDNNIDNADKHQFWLSMIKTF
>NZ_CP007471.1|WP_044345432.1|716021_718217_-|TonB-dependent-hemoglobin/transferrin/lactoferrin-family-receptor
MRFSKLSLAITTTLVTANALAQSVELDSINVIATRDPSRFAYTPEKQSKDSLLSKQATSVAAALEDIPNVDIRGGSRSIAQKPNIRGLSDNRVVQVIDGVRQNFDLAHRGSYFLPMSLIQEIEVIKGPSSSLWGSGALGGVVAMRTPNALDLLKNNDKFGVKIRQGYQTANNLSERDVSVFAANDKFDVLLSGFYNNADNLRTGRGNKLNNTAYKQFGGLAKFGWQINDANRVELSHRETRFKQTAPGNNEVENELTNEKIIDQINEFHKSNNSSPPKAKPSEEEFYSGVKTRFGSVSYLSDQQIPDQSTVFNYYLTPDNPYLNTHIALYNNKTIEKEQRKVSGVKDQTKLTTRGINLRNSSELSHISFVYGVDYMRDKIRTERGTNNTDAKFRAEPYNANSNTTGVYLIAHIPLFGEKLLVSPSVRYDHYDTSSKTVKYKDNHLSPATKLTWIVTNWLDFTAKYNEAFRAPSMQERFVSGAHFGANTLGLDQVNRFVANPNLRPETAKNKEITANLHFDSLFKQGDKFKIEATYFRNDVKDFINLKIFNNPNPNPNPNPNPNTNPNTNTNTNTNTNRAFLPTKSQYQNITNARLSGIELQAQYQTERLTLFTNYGSTKGRDKDSGEALSNIAASKIGVGADYALVKDKFTVGATITHYAAQHRVPKDHAVTYPSYILTDLRATYAPLKGEWKNLRLDFALENLFDRKYQPAFSLMEGTGRNAKISAVYSF
>NZ_CP007471.1|WP_044345434.1|718538_719582_-|glycosyl-transferase
MPLFTEAPKSLCILRLSAVGDVCHALAVVQHIQAYYPQTEVTWIVGKTEMGLLSGIPNITLIPYDKKTGWKGVLSLWKQLKNKQFDALLNMQTAFRASILSLGIKAKFKIGFGEKRSREGQWLFVNRRITDPSSPHVLDGFMAFAEYIGVPKAEPKWELAISQDDDKFADQFIDFSRKNLLISPCSSKAEKDWLIERYAEVANIAHQHNVNVIFCSSPAKRELEIVEKITALCHFTPTNIAGKTNLKQLTALISKVDLVLSPDSGPAHIATTQGTPVIGLYAYHNPLRTAPYKNLDNVVSVYEENAQKEFGKPSSELPWATKLKGKNLMAEIQVEPVIEQMKKLGLF
>NZ_CP007471.1|WP_044345436.1|719658_720384_+|3-deoxy-D-manno-octulosonic-acid-kinase
MHQFQQDNQYFIFNFDRTFEQATEFFQAEFWQKQERVIGSAKGRGTTYFLQTEDWFGVNCALRHYYRGGLWGKLNKDRYRFSALETTRSFAEFHLLQRLYEAGLPVPKPIAARIQKGKLGICYQADILTEKIENAQDLTALLQTQTLPKETWTQIGRLIRKLHDLQICHTDLNAHNILLQQAEQEQKCWLIDFDKCGKKSGDFWKVQNLNRLKRSFEKEVGRMNIQFTEQNWADLTAAYHQ
>NZ_CP007471.1|WP_042603012.1|720395_720983_+|RdgB/HAM1-family-non-canonical-purine-NTP-pyrophosphatase
MKQKIVLATGNKGKVKEMADVLSDFGFEVIAQTDLGIESPEETGLTFVENALLKARYASEKSGLPAIADDSGLVVSALNGAPGLYSARYAGEEGNDAKNREKLLAELAHVAQDKRQAKFVSCIVFLQHPTDPSPIISEGECCGVIGFEEKGENGFGYDSLFFSPEQGCTFAELETVEKKKISHRAKALSVLKSKL
>NZ_CP007471.1|WP_042593467.1|721141_722038_+|glycosyltransferase-family-8-protein
MNIIFSSDNYYAPYLAVSIFSIIKNTPKKINFYILDMKINQENKTIINNLASEYSCKVFFLPVCESDFQNFPKTIDYISLATYARLNLTKYIKNIEKAIYIDVDTLTNSSLQELWNIDITNYYLAACRDTFIDVKNEAYKKTIGLEGDFYFNAGILLINLNKWKEENIFQKSINWMNKYNNVMKYQDQDILNGICKGKVKFINNRFNFTPTDRDLIKKKNLLCVKMPIVISHYCGPNKFWHKKCSHLNCHIGNLLLKEMDKIIDIPSSWYDHFEKIPFLIKIKRLRKRIRDKLIYGIY
>NZ_CP007471.1|WP_005653397.1|722751_723075_-|ribosome-associated-translation-inhibitor-RaiA
MTLNITSKQMDITPAIREHLEERLAKLGKWQTQLISPHFVLNKVPNGFSVEASIGTPLGNLLASATSDDMYKAINEVEEKLERQLNKLQHKSESRRADERLKDSFEN
>NZ_CP007471.1|WP_044345440.1|723264_723894_-|outer-membrane-protein-assembly-factor-BamC
MKKIILNLVTAIILAGCSSNPETLKATNDSFQKSETSIPHFSPLATGGVQLPKADDAYSLPNIEVKKGENIDIRPPLIPLAIIQNSITKFDGERSLIVYPKQQAKLYNLQQVKRLLKDEGISSTTDGSILTTDWAKTERIGDKSIEIKYQIEQVMTADVSALTVSILHMRRDGIIFTPNVSDKQYYTSERLNRIVLTLTTAYNKQLQDL
>NZ_CP007471.1|WP_005692198.1|724004_724901_-|4-hydroxy-tetrahydrodipicolinate-synthase
MSAQNPLFSGSIVALVTPMNHYGEVDFSCLEKLVEHHIEAGSNALVSVGTTGESATLSIEENVKVIEKTVEFAKGRIPIIAGAGANATSEAITMTKLLRDSGVAGCLSVVPYYNKPTQEGMYQHFKAIAECTDLPQILYNVPSRTGSDMKPETVARLAEIENIVGIKEATGDVSRIVKIKQLAGKNFIVLSGNDTTGLEAIKLGAEGVISVTNNIAAKDMADMCRYALAGDFDKAEEINARLMRLHHDLFIESNPIPVKWAAYRLGLIKSPHLRLPLTTLSEEIQPKVEDALKIAGLL
>NZ_CP007471.1|WP_005653400.1|725001_725469_+|thioredoxin-dependent-thiol-peroxidase
MNPLSVGNQAPAFTLLNQQEKFVSLSDFRGKKVLIYFYPKALTPGCTTQACGLRDSKSELDALGLVVLGISPDAPKKLAQFIEKKELNFTLLSDPDHQVAEQFGVWGEKKFMGRTYDGIHRISFLINESGTIMQVFDKFKIKDHHQMIIDYLRSL

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Crispr_ID: NZ_CP007471_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP007471_2

1120352-1120439

Orphan

Consensus_repeat	Method
ACCTTCCCCCGCAAGCAAGGGAAGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP007471_2

>merge|NZ_CP007471|2|1120352-1120439|CRISPRCasFinder
ACCTTCCCCCGCAAGCAAGGGAAGGCAAGATTTTCTTTGAGCCTCTTTTTGTCACTTTGTGATACCTTCCCCCGCAAGCAGGGGAAGG

>NZ_CP007471|2|2|1120352-1120439|CRISPRCasFinder
ACCTTCCCCCGCAAGCAAGGGAAGG	CAAGATTTTCTTTGAGCCTCTTTTTGTCACTTTGTGAT
ACCTTCCCCCGCAAGCAGGGGAAGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007471.1\|WP_005689725.1\|1120454_1121162_-\|electron-transport-complex-subunit-E	unknown	unknown	gnl\|CDD\|237091
NZ_CP007471.1\|WP_005688002.1\|1121786_1122863_-\|electron-transport-complex-subunit-RsxD	unknown	unknown	gnl\|CDD\|234844
NZ_CP007471.1\|WP_080334647.1\|1116447_1117137_+\|molybdate-ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|181841
NZ_CP007471.1\|WP_044345583.1\|1117123_1118179_+\|molybdenum-ABC-transporter-ATP-binding-protein-ModC	unknown	unknown	gnl\|CDD\|182993
NZ_CP007471.1\|WP_005658210.1\|1118202_1119576_-\|sodium-dependent-transporter	unknown	unknown	gnl\|CDD\|271367
NZ_CP007471.1\|WP_011272746.1\|1127613_1128279_+\|DUF2057-domain-containing-protein	unknown	unknown	gnl\|CDD\|234990
NZ_CP007471.1\|WP_005689720.1\|1126354_1127416_-\|protease-SohB	unknown	unknown	gnl\|CDD\|236978
NZ_CP007471.1\|WP_005688019.1\|1112805_1113690_+\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|366154
NZ_CP007471.1\|WP_005654147.1\|1125492_1126071_-\|electron-transport-complex-subunit-RsxA	unknown	unknown	gnl\|CDD\|235352
NZ_CP007471.1\|WP_005631918.1\|1119634_1120270_-\|endonuclease-III	unknown	unknown	gnl\|CDD\|182661
NZ_CP007471.1\|WP_005688021.1\|1112020_1112794_+\|glycosyltransferase-family-25-protein	unknown	unknown	gnl\|CDD\|225843
NZ_CP007471.1\|WP_080334631.1\|1130578_1132531_-\|adhesin	unknown	unknown	gnl\|CDD\|375681
NZ_CP007471.1\|WP_005688015.1\|1114598_1115372_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182640
NZ_CP007471.1\|WP_005650033.1\|1124823_1125405_-\|electron-transport-complex-subunit-RsxB	unknown	unknown	gnl\|CDD\|235347
NZ_CP007471.1\|WP_044345584.1\|1122867_1124823_-\|electron-transport-complex-subunit-RsxC	unknown	unknown	gnl\|CDD\|235334
NZ_CP007471.1\|WP_005689723.1\|1121163_1121787_-\|electron-transport-complex-subunit-RsxG	unknown	unknown	gnl\|CDD\|179350
NZ_CP007471.1\|WP_005644814.1\|1115509_1116274_+\|molybdate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|182641
NZ_CP007471.1\|WP_014550665.1\|1113709_1114495_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|133038
NZ_CP007471.1\|WP_005658225.1\|1110947_1112009_+\|glycosyltransferase-family-4-protein	unknown	unknown	gnl\|CDD\|340847
NZ_CP007471.1\|WP_044345587.1\|1128346_1130482_+\|TIGR01666-family-membrane-protein	unknown	unknown	gnl\|CDD\|130727

Protein	Function_ID	Function_description	E-value
NZ_CP007471.1\|WP_005689725.1\|1120454_1121162_-\|electron-transport-complex-subunit-E	gnl\|CDD\|237091	PRK12405, PRK12405, electron transport complex RsxE subunit; Provisional.	4.5237e-131
NZ_CP007471.1\|WP_005688002.1\|1121786_1122863_-\|electron-transport-complex-subunit-RsxD	gnl\|CDD\|234844	PRK00816, rnfD, electron transport complex protein RnfD; Reviewed.	0
NZ_CP007471.1\|WP_080334647.1\|1116447_1117137_+\|molybdate-ABC-transporter-permease-subunit	gnl\|CDD\|181841	PRK09421, modB, molybdate ABC transporter permease subunit.	1.90366e-137
NZ_CP007471.1\|WP_044345583.1\|1117123_1118179_+\|molybdenum-ABC-transporter-ATP-binding-protein-ModC	gnl\|CDD\|182993	PRK11144, modC, molybdenum ABC transporter ATP-binding protein ModC.	0
NZ_CP007471.1\|WP_005658210.1\|1118202_1119576_-\|sodium-dependent-transporter	gnl\|CDD\|271367	cd10336, SLC6sbd_Tyt1-Like, solute carrier 6 subfamily, Fusobacterium nucleatum Tyt1-like; solute-binding domain. SLC6 proteins (also called the sodium- and chloride-dependent neurotransmitter transporter family or Na+/Cl--dependent transporter family) include neurotransmitter transporters (NTTs): these are sodium- and chloride-dependent plasma membrane transporters for the monoamine neurotransmitters serotonin (5-hydroxytryptamine), dopamine, and norepinephrine, and the amino acid neurotransmitters GABA and glycine. These NTTs are widely expressed in the mammalian brain, involved in regulating neurotransmitter signaling and homeostasis, and the target of a range of therapeutic drugs for the treatment of psychiatric diseases. Bacterial members of the SLC6 family include the LeuT amino acid transporter. An arrangement of 12 transmembrane (TM) helices appears to be as a common topological motif for eukaryotic and some prokaryotic and archaeal NTTs. However, this subfamily which contains the majority of bacterial members and some archaeal members, appears to contain only 11 TMs; for example the functional Fusobacterium nucleatum tyrosine transporter Tyt1.	9.07889e-165
NZ_CP007471.1\|WP_011272746.1\|1127613_1128279_+\|DUF2057-domain-containing-protein	gnl\|CDD\|234990	PRK01904, PRK01904, DUF2057 domain-containing protein.	1.08187e-115
NZ_CP007471.1\|WP_005689720.1\|1126354_1127416_-\|protease-SohB	gnl\|CDD\|236978	PRK11778, PRK11778, putative inner membrane peptidase; Provisional.	0
NZ_CP007471.1\|WP_005688019.1\|1112805_1113690_+\|glycosyltransferase-family-2-protein	gnl\|CDD\|366154	pfam00535, Glycos_transf_2, Glycosyl transferase family 2. Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.	1.41664e-33
NZ_CP007471.1\|WP_005654147.1\|1125492_1126071_-\|electron-transport-complex-subunit-RsxA	gnl\|CDD\|235352	PRK05151, PRK05151, electron transport complex protein RsxA; Provisional.	5.78855e-111
NZ_CP007471.1\|WP_005631918.1\|1119634_1120270_-\|endonuclease-III	gnl\|CDD\|182661	PRK10702, PRK10702, endonuclease III; Provisional.	2.07255e-139
NZ_CP007471.1\|WP_005688021.1\|1112020_1112794_+\|glycosyltransferase-family-25-protein	gnl\|CDD\|225843	COG3306, COG3306, Glycosyltransferase involved in LPS biosynthesis [Cell envelope biogenesis, outer membrane].	1.09093e-54
NZ_CP007471.1\|WP_080334631.1\|1130578_1132531_-\|adhesin	gnl\|CDD\|375681	pfam18254, HMw1_D2, HMW1 domain 2. This domain is found in Actinobacillus pleuropneumoniae HMW1C (ApHMW1C). HMW1 adhesin is an N-linked glycoprotein that mediates adherence to respiratory epithelium through N-glycosylation of protein acceptor sites and O-glycosylation of sugar acceptor sites. This domain forms an all alpha domain (AAD) when combined with the N-terminal domain. The AAD interacts extensively with the C-terminal GT-B fold in order to create a unique groove with the potential to accommodate the acceptor protein.	2.77061e-48
NZ_CP007471.1\|WP_005688015.1\|1114598_1115372_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|182640	PRK10676, PRK10676, DNA-binding transcriptional regulator ModE; Provisional.	1.05131e-83
NZ_CP007471.1\|WP_005650033.1\|1124823_1125405_-\|electron-transport-complex-subunit-RsxB	gnl\|CDD\|235347	PRK05113, PRK05113, electron transport complex protein RnfB; Provisional.	1.12731e-113
NZ_CP007471.1\|WP_044345584.1\|1122867_1124823_-\|electron-transport-complex-subunit-RsxC	gnl\|CDD\|235334	PRK05035, PRK05035, electron transport complex protein RnfC; Provisional.	0
NZ_CP007471.1\|WP_005689723.1\|1121163_1121787_-\|electron-transport-complex-subunit-RsxG	gnl\|CDD\|179350	PRK01908, PRK01908, electron transport complex protein RnfG; Validated.	1.08851e-127
NZ_CP007471.1\|WP_005644814.1\|1115509_1116274_+\|molybdate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|182641	PRK10677, modA, molybdate transporter periplasmic protein; Provisional.	8.76868e-99
NZ_CP007471.1\|WP_014550665.1\|1113709_1114495_+\|glycosyltransferase	gnl\|CDD\|133038	cd04195, GT2_AmsE_like, GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.	3.90576e-116
NZ_CP007471.1\|WP_005658225.1\|1110947_1112009_+\|glycosyltransferase-family-4-protein	gnl\|CDD\|340847	cd03820, GT4_AmsD-like, amylovoran biosynthesis glycosyltransferase AmsD and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.	6.66878e-136
NZ_CP007471.1\|WP_044345587.1\|1128346_1130482_+\|TIGR01666-family-membrane-protein	gnl\|CDD\|130727	TIGR01666, Uncharacterized_protein_HI_1680, TIGR01666 family membrane protein. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are >700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS. [Cell envelope, Other].	0

>NZ_CP007471.1|WP_005631918.1|1119634_1120270_-|endonuclease-III
MNKTKRIEILTRLREQNPHPTTELQYNSPFELLIAVILSAQATDKGVNKATEKLFPVANTPQAILDLGLDGLKSYIKTIGLFNSKAENIIKTCRDLIEKHNGEIPENREALEALAGVGRKTANVVLNTAFGHPTIAVDTHIFRVCNRTNFAAGKDVVKVEEKLLKVVPNEFKVDVHHWLILHGRYTCIARKPRCGSCIIEDLCEYKEKVEF
>NZ_CP007471.1|WP_005658210.1|1118202_1119576_-|sodium-dependent-transporter
MTTNNKQRQTWSSRLTYVMTVAGATVGFGATWRFPYLVGENGGGAYVLLFCIAMIIIGIPMILVENVIGRRLRVNSIDAFGDKILDKGKGISKYWKILGYMGLLGAFGIMAYYMVLGGWVISYIISLISGTLDISAPITKDIAKNFYDLHIGNSPYEIIFYTLLFVIVNYIILAKGIIGGIERSVKYLMPLLFIFLIGMVIRNVTLPGAMEGITFYLKPDFSKITPQLFIFVLGQVFFALSLGFGVLITLSSYLNKEENLIHTAVITGFTNTIIAVLAGFMIFPSLFTFGIEPNAGPTLVFQSLPIVFSHLWAGKFFAIIFFGLLLIAALTTSITIYEVIITALQEKLRMRRGKAIVLTLGGIFLLGNIPAILGDNLWKNVTIFGKSIFDFYDYASGNILFMLTALGCAIFVGFVLKDEAKKELSSTKYSTFIKIWFNYVKFVVPVIILVIFISNLF
>NZ_CP007471.1|WP_044345583.1|1117123_1118179_+|molybdenum-ABC-transporter-ATP-binding-protein-ModC
MLQINVKKQLGQLALQANIQLPDQGVTAIFGLSGSGKTSLINLVSGLIQLDEGFIRLNDRTLVDMESQESLPIHLRKIGYVFQDARLFPHYTVKGNLRYGMKNVSQDDFNYIVDLLGITHLLKRYPLTLSGGEKQRVAIGRALLTDPDILLMDEPLSALDVPRKRELMQYLERLSKEINIPILYVTHSLDELLRLADRVVLMENGIVKAYDSVEKIWNSPIFAPWKGESEQSSVLALPVHLHNPPYKMTALSLGEQVLWIHQVPANVGERVRVCIYSSDVSITLQKPEQTSIRNISRGQVAQIEIQDSRVDLAVLVEGNKIWASISKWAQNELRFAVGQDVYVQIKAVSVM
>NZ_CP007471.1|WP_080334647.1|1116447_1117137_+|molybdate-ABC-transporter-permease-subunit
MEISAINLSLSVAVSSMLWSLPLAIFVAWLLARKNFYGKSLITGVIHLPLVLPPVVIGYLLLVAMGRNGFIGKYLYQWFGLSFGFSWKGAVFSSAVVAFPLVIRAIRLSLENIDIKLEQAAQTLGASAWRVFFTITLPLSLPGVLAGLVLGFARSLGEFGATITFVSNIAGETQTIPLAMYSFIQTPGAEEQTARLCLFAIILSLISLLLSEWLSKRMQKKLGQGNVAD
>NZ_CP007471.1|WP_005644814.1|1115509_1116274_+|molybdate-ABC-transporter-substrate-binding-protein
MKKLTKISTALLIAGLGFSFAASAKVTVFAAASMTDALQQVAKDYAKQNPKNEVVFSFASSSTLAKQVEEGAPADIFVSASNKWMKYLSEKDLTVKETEKVLVGNDLVLIAPAKSAVNSVDIAKGEWINALKDSYLSVGDPAHVPAGQYAEEALTKLNLWDKVQDRLARAKDVRGALALVERAEAPYGIVYSTDAKVSQQVKTVAVFPADSHKPVVYPVSIVKGHDNADSRDFLKYLESDAAKKVLVGYGFSAK
>NZ_CP007471.1|WP_005688015.1|1114598_1115372_-|LysR-family-transcriptional-regulator
MKNTEILLTIKLQQALFIDPKRVRLLKEIQQCGSINQAAKNAKVSYKSAWDHLEAMNKISPRPLLERNTGGKNGGGTVLTTYAERLLQLYDLLERTQEHAFHILQDESVPLDSLLTATARFSLQSSARNQFFGRVAQQRIIDSRCVVDVNVNVQGLPTPLQVSITTKSSARLKLITEKEVMLMFKAPWVKISEQPLANQPNQFPVNIKSLNEEEAILQFAESDIEFCATVHQPNQWQIGQQVWIHIDQEQIILATLG
>NZ_CP007471.1|WP_014550665.1|1113709_1114495_+|glycosyltransferase
MSLYIKENPQFLRECFESLVAQTRQADEIVLVFDGTVTPELESVVTEFETKLPLKLVKLPQNRGLGKALNEGLLHCDYDWVFRMDTDDICVPERFEKQVAFIEQHPETIIFGGQIAEFGENINDIVAYRNVPTSAQEIIKFTQKRCPFNHMTVAYQKSAVINCGGYEDLQEDYYLWIKLVAQGLYMANLPDILVYARVGNGMVSRRRGVNQAKAEWRLFKLKYRLGIQGLLSGLFTFALRFGSRLLPTSLLKNLYQTFLRK
>NZ_CP007471.1|WP_005688019.1|1112805_1113690_+|glycosyltransferase-family-2-protein
MLSIIVPSYNRKAEVPALLESLTQQTSSNFEVIIVDDCSKDPVEVTQSYPFVVKVIRNETNQGAAESRNIGARASKGDWLLFLDDDDRFMPEKSEKILQVIEQNPDINFIYHPAKCEMVNEGFSYVTQPIEPQEISTERILLANKIGGMPMIAIKKEMFLKIGGLSTALRSLEDYDFLLKLLQEPSFTPYKINEPLTYCTFHTKRSSVSTDTTNTQKAIDYIREHYVKTVEQARNFDINASYILAYPHIMNLSRKATKYYFDIFKKTKSIKQFIITLVILISPKLAINLKRLGK
>NZ_CP007471.1|WP_005688021.1|1112020_1112794_+|glycosyltransferase-family-25-protein
MLKKYLISLDKDIQRRKLFFSQKNTEDFQIFSAINTMQKDWDELASIFNIEQFKAHYFRNVTKGEIGCTLSHLSVYQKIIEDNDIAEDSYALVCEDDALFHSDFQQNLTALLSEKLEAEIILLGQSKINNFNDTDLEINYPTTFSFLCKKTGNVNYAFPYKSYFAGTVGYLIKKSAARRFIQQISQNKPFWLADDFLLFEQNFNIRNKVVRPLMVIENPVLISNLESVRGSLSNNLLKKLMKYPLKKIFAIKKNLAN
>NZ_CP007471.1|WP_005658225.1|1110947_1112009_+|glycosyltransferase-family-4-protein
MKKIGFFIMNIESAGGTERVSINVANALAKQGYDVSFISIGGNKPFFQVDEKINIYAMNKLPYSLKKDYFSITKKLRELVKELQLDTLIVVDGAIMLFSALALVNLNIKHILWEHYSFNFTGNRLVRTLGKYLAVTTCDKIVTLTEAEKTLWQEKFKTNNIITIANPNTLLPKNKLAKWENKTILSVGHLFSYKGFDYLLKVWQVLAKKYPDWNLKIVGSGEEEENLKNLAKALDIEDSVNFTPRTNDVSFYYESSSIYCLPSQTEGLPLVVIEAMAFGLPIVAFNCSPGVKQLVEHKENGFLCEKNNIEEMVKGLDLLINNPELYQQMSDKSRLMSEDYGIEKIIEEWKGIL
>NZ_CP007471.1|WP_005689725.1|1120454_1121162_-|electron-transport-complex-subunit-E
MTDLTEKNTALEEEKIESAVENQQKSIWKEIFAQGIWKNNPAVVQLLGLCPLLAVSSTATNALGLSLATMLVLTCTNTVISLFRQYIPKEIRIPIYVMIIATTVTAVQLLMNAYTYTLYQSLGIFIPLIVTNCIIIGRAEAFASKNSLLHSIWDGFSMGLGMALSLTILGALREIIGQGTIFEGIENLFGEQAKFLTHHIYHTDSSFLLFILPPGAFIGLGLLLAIKNRIDNVKK
>NZ_CP007471.1|WP_005689723.1|1121163_1121787_-|electron-transport-complex-subunit-RsxG
MGTVKITSRYGILLGFIALLCTIISAGIYFLTKDKIDAVIAAQQRELLLQVIPQDYFNNNLLESAVIPQDKNFVGIQKIYFAKKDGNISAYAYETTAPDGYSGDIRLLVGLDPKGEVLGVRVIEHHETPGLGDKIERRISNWILGFTNQSINEHNLSEWAVKKDGGKFDQFSGATITPRAVVNQTKRSALIMLNNQALLQQLSTQVK
>NZ_CP007471.1|WP_005688002.1|1121786_1122863_-|electron-transport-complex-subunit-RsxD
MFKMVSSPHTHSGKLTARIMLWVILAMMPAFFTQIYYFGFGVLLQSALAIGTAIIAEFIAIKLRGKKPLNYLSDFSVALTALILAMAIPPYAPYWVIIIGTLCAVLLGKQVYGGLGQNPFNPAMIGYVILLISFPLQMTTWMPPINLLQEPPTFSDAFSLIFSGLTTDGFTLSQLTHNIDGITQATPLDSAKIFYKSHNQLSDFYELIKLPIFMGNGTDFAQGWWQINVAFLAGGIFLILKRIIHWQIPVAMLVTFFCLATATAFTGFTHLSAISQLVSGAMMFGAFFIATDPVTASITPRGKIIFGALVGLFVYLIRYHGNYPDGVAFAILLSNICVPLIDHYTRPRVSGYPTKGRK
>NZ_CP007471.1|WP_044345584.1|1122867_1124823_-|electron-transport-complex-subunit-RsxC
MADVLSRFNSGKLWDFKGGIHPPEMKSQSNSQPLRHLPLGTDFYIPLKQHLGTTGNLLIKEGDYVLKGQALTKGDGLRMLPVHAPTSGTIKSIKPYVATHPSGLDEPTIHLQADGLDQWIERNPIDDFSTLSPEQLIHKIYQAGIAGLGGAVFPTAAKIQSAEQKVKLLIINGAECEPYITCDDRLMRERADEIIKGIRILRYILHPEKVVIAIEDNKPEAISAIRNALQGANDISVRVIPTKYPSGATKQLIYLLTGIEVPSGERSSSIGVLMQNVGTMFAIKRAVINDEPLIERVVTLTGNKIAEKGNYWVRLGTPISQILSDAGYQFDKHFPIFAGGPMMGLELPNLNAPVTKLVNCLLAPDYLEYAEPEAEQACIRCSSCSDACPVNLMPQQLYWFARSEDHKKSEEYALKDCIECGICAYVCPSHIPLIQYFRQEKAKIWQIKEKQKKSDEAKIRFEAKQARMEREEQERKARSQRAAQARREELAQTKGEDPVKAALERLKAKKANETESTQIKTLTSEKGEVLPDNTDLMAQRKARRLARQQAASQVENQEQQTQPTDAKKAVVAAAIARAKAKKLAQANSTSEAISNSQTAENEVEKTKSAVEKTQENSTALDPKKAAVAAAIARAKAKKLAKTQTTLENNQE
>NZ_CP007471.1|WP_005650033.1|1124823_1125405_-|electron-transport-complex-subunit-RsxB
MTFLFIVITLLALIFGAILGFASIKLKVEADPVVEKIDAILPQSQCGQCGYPGCKPYAEAICNGDEITKCIPGGQTTIVKIAEILGVDVPTMEGIEEPIEKVAFIDENMCIGCTKCIQACPVDAIIGTNKAMHTIIPDLCTGCELCVAPCPTDCILMIPVKKNIDNWDWKFDAKLVIPVMNVDGSEKKLVVGE
>NZ_CP007471.1|WP_005654147.1|1125492_1126071_-|electron-transport-complex-subunit-RsxA
MTHYILLIIGTALINNFVLVKFLGLCPFMGVSKKIETAVGMGLATMFVLTVASLCAYLVDHYILIPLNATFLRTLVFILVIAVVVQFTEMAINKTSPTLYRLLGIFLPLITTNCAVLGVALLNVNLAHNLTESVVYGFGASLGFSLVLVLFAALRERLVAADIPATFRGSAIALITAGLMSLAFMGFTGLVK
>NZ_CP007471.1|WP_005689720.1|1126354_1127416_-|protease-SohB
MLNDILTGYGIFILEILTILLLILAIVGLIISYRQHNKSKVGELEIKDLSEEFNEQVRLLRDFNLSEEEQKQRTKAEKKAEKQNAKKRKEKLKKGDTLEDEKKACVYVLDFCGDISASETTALREEISAILNVAKPEDEVLLRLESPGGIVHNYGFAASQLSRLKQKGIKLTVAVDKVAASGGYMMACVADKIVSAPFAVIGSIGVVAQIPNVHRLLKKHDVDVDVMTAGEFKRTVTVLGENTEKGKQKFQQELEETHKLFKQFVSQNRPCLDIDKIATGEHWFGQQAIALQLVDEISTSDDLILEKMKEKQVLNVKYRLKKSLIKKFGRQAEESAINIIHRYSTKQSRDFMY
>NZ_CP007471.1|WP_011272746.1|1127613_1128279_+|DUF2057-domain-containing-protein
MKLRAVVLGLATLCTSTATFAGMVSTSSNLEFLAIDGQKASKSLGKAKTFTVDDTQSHQVVVRLNEIVGSGSNQSLFESNPVIVTFQGNAEDLVISAPAIRNLDSGDKFNQMPNITVKTKSGNAISAKVDVLKQEGLFPSGNVLNDLAEYNASGAAASVSKFTATTSANSMVAVPAGNAKANKGKVVVQGENVAEQQLQYWFQQADKETQTRFLNWAKSHK
>NZ_CP007471.1|WP_044345587.1|1128346_1130482_+|TIGR01666-family-membrane-protein
MNIRLNAKVISTIPVFIAVNIAAVGIWFFDISSQSMPLILGIIAGGLVDLDNRLTGRLKNVFFTLIAFSISSFIVQLHIGKPIQYIVLMTVLTFIFTMIGAVGQRYSTIAFGSLVVALYTTLTYIPEVNVWFINPVMILCGTLLYSVVTLIVYLFFPNRPVQESVAKAFCALGEYLDTKSCFFDPDEVAEIEKKHLNFAMKNANVVTAFNIVRTALFYRIRGQHRHPRTQRMLRYYFAAQDIHERANSTHFDYQQITEKLKNTDLIFRIQRLLELQAQSCKEITASLRENKPYHFNERVERALLGTLHSFELYRTQHLNDQDELIDIQTLLDNLQSINWQLRQLAQDTTDTEQLAQIHTEQITGLKNISAVIFSHFTFESPLFRHAVRLSIVVFLCCAIVEFFQFNLGYWILLTTVFVCQPNYSATKVRLRQRIIGTILGVVVGSLLPYLNPTLELKQGLVVLTSTLFFFFRSNNYSFSTFFITLQVLLSFDVMGFDTAAALMPRLLDTLLGAAISWFAVSYLWPDWKYLQLDKVSHQALRSDAVYLLHIISQLQFGKSDDLKYRIARRNAHQYAAALSTTLSNMNNEPVKYKAYLQKGFDLLKLNYSLLSYISALGAYRDRMKNLQQTAQFLSGFYPVAKKIIYTLEHIEEIPEAIFNQQQESIETHLKELEKQEMTAEERAVFSLPYQQLNLITQLLPQFYEYFRKESC
>NZ_CP007471.1|WP_080334631.1|1130578_1132531_-|adhesin
MTKENLQNAPQNTTVSLVESNNNQTSPQMLQQSPKPSLLRLEQHIEKKDYEFACRELMVILEKMDANFGGVHDIEFDAPAQLAYLPEKLLIYFATRLANAITTLFSDPELAISEEGALKMISLQRWLTLIFASSPYVNADHILNKYNINPDSEGGFHLATDNSSIAKFCIFYLPESNVNMSLDALWAGNQQLCASLCFALQSSRFIGTASAFHKRAVVLQWFPKKLAEIANLDELPANILHDVYMHCSYDLAKNKHDVKRPLNELVRKHILTQGWQDRYLYTLGKKDGKPVMMVLLEHFNSGHSIYRTHSTSMIAAREKFYLVGLGHESVDDIGRAVFDEFFEISSNNIMERLFFIRKQCETFQPAVFYMPSIGMDITTIFVSNTRLAPIQAVALGHPATTHSEFIDYVIVEDDYVGSEDCFSETLLRLPKDALPYVPSALAPQKVDYVLRENPEVVNIGIAATTMKLNPEFLLTLQEIRDKAKVKIHFHFALGQSTGLTHPYVKWFIESYLGDDATAHPHAPYHDYLAILRDCDMLLNPFPFGNTNGIIDMVTLGLIGVCKTGDEVHEHIDEGLFKRLGLPEWLIADTRETYIECALRLAENHQERLELRRYIIENNGLQKLFTGDPRPLGKILLKKTNEWKRKHLSKK

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP007471_1	1.1\|713700\|34\|NZ_CP007471\|CRISPRCasFinder	713700-713733	34	MH572422	Microviridae sp. isolate SD_MC_8, complete genome	4166-4199	9	0.735

1. spacer 1.1|713700|34|NZ_CP007471|CRISPRCasFinder matches to MH572422 (Microviridae sp. isolate SD_MC_8, complete genome) position: , mismatch: 9, identity: 0.735

catcgccattaagtaccacgaaatctttcgcctt	CRISPR spacer
ttttaccattaagtaccacaaaatcattcggata	Protospacer
. *..**************.***** ****  *

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1237266 : 1243944

Sodalis_phage(16.67%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005688173.1\|1237266_1237557_+	integration host factor subunit alpha	Q2A099	Sodalis_phage	1.5e-10	38.2
WP_005688175.1\|1237609_1238095_+	endopeptidase	A0A2H5BM69	Streptomyces_phage	2.3e-16	39.3
WP_044345631.1\|1238160_1239114_+	WYL domain-containing transcriptional regulator	NA	NA	NA	NA
WP_005688179.1\|1239172_1239628_+	hypothetical protein	I6X231	Vibriophage	3.5e-43	63.0
WP_005671438.1\|1239611_1240322_+	NAD-dependent deacylase	R9TG77	Vibrio_phage	3.2e-27	40.1
WP_005688182.1\|1240400_1240895_+	hypothetical protein	NA	NA	NA	NA
WP_044345634.1\|1241681_1242683_-	cytochrome c	Q9JMN3	Wolbachia_phage	5.4e-20	39.8
WP_005688188.1\|1242901_1243102_+	cell division protein FtsK	NA	NA	NA	NA
WP_005688189.1\|1243098_1243944_+	NAD-dependent deacetylase	A0A1C3S788	Escherichia_phage	7.0e-05	22.9

DBSCAN-SWA_2

1315054 : 1327027

Acinetobacter_phage(42.86%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_044330129.1\|1315054_1317919_+\|tRNA	valine--tRNA ligase	A0A1V0SK04	Klosneuvirus	2.1e-149	37.5
WP_005659477.1\|1317952_1318225_-	hydrogenase maturation factor HybG	NA	NA	NA	NA
WP_080317233.1\|1318286_1319720_-	bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF	A0A0P0IR83	Acinetobacter_phage	1.2e-33	38.0
WP_042594026.1\|1319757_1320759_-	anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	8.8e-47	35.3
WP_005662273.1\|1320811_1321198_-	tautomerase family protein	NA	NA	NA	NA
WP_044345677.1\|1321246_1321828_-	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	5.9e-35	39.9
WP_005687196.1\|1321840_1323397_-	anthranilate synthase component I	A0A0B5J984	Pandoravirus	2.4e-22	33.2
WP_044345679.1\|1323502_1324267_-	glycosyltransferase	M1HQG0	Paramecium_bursaria_Chlorella_virus	6.8e-15	29.6
WP_005650592.1\|1324499_1324997_-	non-heme ferritin	NA	NA	NA	NA
WP_005650594.1\|1325016_1325505_-	non-heme ferritin	NA	NA	NA	NA
WP_074031221.1\|1326022_1327027_+	phosphate ABC transporter substrate-binding protein PstS	A0A222YW41	Synechococcus_phage	1.2e-51	40.5

DBSCAN-SWA_3

1604082 : 1612600

uncultured_Caudovirales_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005686508.1\|1604082_1604766_+	7-cyano-7-deazaguanine synthase QueC	A0A2H4J8Q7	uncultured_Caudovirales_phage	2.3e-54	50.7
WP_044345781.1\|1604758_1605184_+	6-carboxytetrahydropterin synthase QueD	A0A1U9WRB3	Streptococcus_virus	6.0e-21	42.7
WP_005686506.1\|1605184_1605820_+	7-carboxy-7-deazaguanine synthase	S4TZT1	uncultured_phage	8.7e-16	30.3
WP_005647470.1\|1606218_1606452_+	hypothetical protein	NA	NA	NA	NA
WP_074032815.1\|1606435_1608619_+	DNA helicase II	A7KV33	Bacillus_phage	1.8e-116	37.6
WP_074032816.1\|1608738_1609710_+	ABC transporter permease subunit	NA	NA	NA	NA
WP_005686499.1\|1609724_1610612_+	ABC transporter permease subunit	NA	NA	NA	NA
WP_005686498.1\|1610621_1611614_+	dipeptide ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	5.7e-14	30.8
WP_005686497.1\|1611616_1612600_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.4e-20	33.2

DBSCAN-SWA_4

1640625 : 1717963

Haemophilus_phage(48.89%)

integrase,plate,head,protease,tail,terminase,transposase

attL 1684285:1684306|attR 1729037:1729058

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012054474.1\|1640625_1641981_-\|protease	metalloprotease PmbA	NA	NA	NA	NA
WP_005651852.1\|1642069_1642606_+	ribosome-associated protein	NA	NA	NA	NA
WP_012054475.1\|1642656_1643271_+	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA
WP_044345799.1\|1643251_1643770_+	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA
WP_005647567.1\|1643773_1644499_+	LPS export ABC transporter ATP-binding protein	W5SAS9	Pithovirus	1.8e-25	31.3
WP_005651843.1\|1644501_1644996_+	PTS IIA-like nitrogen regulatory protein PtsN	NA	NA	NA	NA
WP_044345802.1\|1645013_1645871_+	RNase adapter RapZ	A0A0R8VB27	Thermobifida_phage	3.4e-07	26.4
WP_005647570.1\|1645915_1647073_-	prephenate dehydratase	NA	NA	NA	NA
WP_005693459.1\|1647199_1648117_-	UDP-3-O-acyl-N-acetylglucosamine deacetylase	NA	NA	NA	NA
WP_044345806.1\|1648155_1649421_-	cell division protein FtsZ	NA	NA	NA	NA
WP_005651835.1\|1649504_1650782_-	cell division protein FtsA	NA	NA	NA	NA
WP_005657246.1\|1650800_1651565_-	cell division protein FtsQ/DivIB	NA	NA	NA	NA
WP_005657248.1\|1651564_1652485_-	D-alanine--D-alanine ligase	NA	NA	NA	NA
WP_005657250.1\|1652556_1653984_-	UDP-N-acetylmuramate--L-alanine ligase	NA	NA	NA	NA
WP_005657251.1\|1654120_1655176_-	undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase	NA	NA	NA	NA
WP_005651826.1\|1655187_1656372_-	putative lipid II flippase FtsW	NA	NA	NA	NA
WP_044345808.1\|1656393_1657707_-	UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase	NA	NA	NA	NA
WP_005661304.1\|1657818_1658901_-	phospho-N-acetylmuramoyl-pentapeptide- transferase	NA	NA	NA	NA
WP_044345809.1\|1658894_1660268_-	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase	NA	NA	NA	NA
WP_044345810.1\|1660281_1661748_-	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase	NA	NA	NA	NA
WP_044345812.1\|1661757_1663590_-	peptidoglycan synthase	NA	NA	NA	NA
WP_005647600.1\|1663601_1663925_-	cell division protein FtsL	NA	NA	NA	NA
WP_042603630.1\|1663927_1664893_-	16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH	NA	NA	NA	NA
WP_005661293.1\|1664923_1665379_-	division/cell wall cluster transcriptional repressor MraZ	NA	NA	NA	NA
WP_005667512.1\|1665580_1667167_-	carbon starvation protein A	NA	NA	NA	NA
WP_061723865.1\|1667364_1667595_+	zinc ribbon domain-containing protein	NA	NA	NA	NA
WP_038440031.1\|1668124_1669078_-	transaldolase	M4QQ61	Prochlorococcus_phage	9.7e-11	32.5
WP_044345820.1\|1669372_1670998_+	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_005661284.1\|1671078_1671999_+	oligopeptide ABC transporter permease OppB	NA	NA	NA	NA
WP_005661282.1\|1672008_1672944_+	oligopeptide ABC transporter permease OppC	NA	NA	NA	NA
WP_005662746.1\|1672953_1673925_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.2e-13	26.8
WP_005657282.1\|1673921_1674920_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.8e-23	33.6
WP_074032937.1\|1674959_1675838_-	VirK/YbjX family protein	NA	NA	NA	NA
WP_005690705.1\|1675930_1676548_+	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA
WP_005647634.1\|1676662_1678192_+	YifB family Mg chelatase-like AAA ATPase	NA	NA	NA	NA
WP_012054490.1\|1678225_1678897_-	deoxyribose-phosphate aldolase	NA	NA	NA	NA
WP_005686413.1\|1679007_1679511_+	protein disulfide oxidoreductase	NA	NA	NA	NA
WP_044345822.1\|1679563_1680490_+	ADP-glyceromanno-heptose 6-epimerase	R9S880	Prochlorococcus_phage	3.8e-36	36.1
WP_044345824.1\|1681927_1682191_+	hypothetical protein	F6MIM3	Haemophilus_phage	1.1e-33	79.1
WP_044345826.1\|1682229_1683075_-	hypothetical protein	F6MIM2	Haemophilus_phage	8.9e-117	71.4
WP_005641687.1\|1683131_1683251_-	Com family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_006995417.1\|1683426_1683915_-	hypothetical protein	F6MIM0	Haemophilus_phage	1.9e-47	56.2
WP_044345828.1\|1683907_1684534_-	hypothetical protein	Q94MX9	Haemophilus_virus	7.2e-31	51.5
1684285:1684306	attL	NA	NA	NA	NA
WP_044345829.1\|1684546_1686574_-\|tail	tail fiber protein	Q94MY0	Haemophilus_virus	2.2e-174	63.4
WP_080334578.1\|1686577_1687174_-	DUF2313 domain-containing protein	F6MIL7	Haemophilus_phage	1.7e-66	63.0
WP_044345832.1\|1687170_1688235_-\|plate	baseplate J/gp47 family protein	F6MIL6	Haemophilus_phage	4.1e-119	62.3
WP_032824912.1\|1688249_1688600_-	hypothetical protein	A0A0M3LQK5	Mannheimia_phage	1.4e-44	75.0
WP_044345834.1\|1688669_1689305_-\|plate	phage baseplate assembly protein V	A0A0M3LPA3	Mannheimia_phage	1.2e-62	58.1
WP_044345835.1\|1689314_1690439_-\|tail	tail protein	F6MIL3	Haemophilus_phage	2.1e-145	72.4
WP_044345836.1\|1690428_1691766_-	phage morphogeneis protein	F6MIL2	Haemophilus_phage	3.1e-108	45.1
WP_040034149.1\|1691769_1694049_-\|tail	phage tail tape measure protein	A0A0M3LPB6	Mannheimia_phage	7.6e-155	48.4
WP_040034148.1\|1694095_1694302_-	hypothetical protein	NA	NA	NA	NA
WP_021034874.1\|1694316_1694658_-	hypothetical protein	A0A0M3LSI2	Mannheimia_phage	1.8e-20	50.5
WP_040034146.1\|1694657_1695029_-	hypothetical protein	A0A0M3LRV6	Mannheimia_phage	3.1e-37	65.8
WP_040034144.1\|1695038_1696454_-\|tail	tail sheath protein	B7SDP8	Haemophilus_phage	3.9e-157	63.0
WP_006995430.1\|1696446_1696629_-	DUF2635 domain-containing protein	A0A0M3LQM9	Mannheimia_phage	8.2e-12	64.8
WP_040034143.1\|1696600_1697263_-	DUF1834 family protein	A0A0M3LQJ7	Mannheimia_phage	1.6e-44	45.0
WP_040034142.1\|1697246_1697678_-	DUF1320 domain-containing protein	B7SDP4	Haemophilus_phage	2.7e-37	61.6
WP_040034141.1\|1697687_1697993_-	hypothetical protein	B7SDP3	Haemophilus_phage	1.2e-20	52.0
WP_040034140.1\|1698056_1698980_-\|head	head protein	B7SDP1	Haemophilus_phage	7.9e-135	74.9
WP_040034139.1\|1698979_1700017_-	hypothetical protein	B7SDN9	Haemophilus_phage	1.4e-68	47.0
WP_005662125.1\|1700298_1700715_-	phage virion morphogenesis protein	B7SDN8	Haemophilus_phage	4.3e-48	68.8
WP_040034138.1\|1700850_1702152_-\|head	head morphogenesis protein	B7SDN5	Haemophilus_phage	1.5e-171	68.6
WP_005661920.1\|1702135_1703758_-	DUF935 domain-containing protein	B7SDN1	Haemophilus_phage	2.8e-204	68.7
WP_005661918.1\|1703826_1705467_-\|terminase	phage terminase large subunit	B7SDN0	Haemophilus_phage	3.5e-250	78.5
WP_005661916.1\|1705603_1706107_-	DUF1804 family protein	F6MIK6	Haemophilus_phage	2.7e-44	51.8
WP_005661915.1\|1706108_1706375_-	hypothetical protein	NA	NA	NA	NA
WP_005661913.1\|1706374_1706632_-	hypothetical protein	NA	NA	NA	NA
WP_044345843.1\|1706755_1707013_-	DUF2681 domain-containing protein	NA	NA	NA	NA
WP_005661904.1\|1707012_1707303_-	DUF2644 domain-containing protein	F6MIK0	Haemophilus_phage	4.4e-15	58.7
WP_005661902.1\|1707456_1707963_-	glycoside hydrolase family 108 protein	A0A0M3LSH2	Mannheimia_phage	5.8e-55	66.0
WP_005661900.1\|1708043_1708472_-	hypothetical protein	A0A0M3LRS6	Mannheimia_phage	8.7e-28	44.6
WP_005661898.1\|1708558_1709488_-	hypothetical protein	NA	NA	NA	NA
WP_005661897.1\|1709541_1709943_-	regulatory protein GemA	A0A0M3LP80	Mannheimia_phage	2.6e-18	42.2
WP_005661895.1\|1709932_1710481_-	hypothetical protein	A0A0M3LPP6	Mannheimia_phage	2.2e-47	51.4
WP_005661893.1\|1710477_1710717_-	hypothetical protein	NA	NA	NA	NA
WP_005661891.1\|1710825_1711074_-	hypothetical protein	NA	NA	NA	NA
WP_005661889.1\|1711077_1711638_-	hypothetical protein	A0A0M3LP85	Mannheimia_phage	4.2e-14	26.4
WP_005688591.1\|1711970_1712225_-	hypothetical protein	A1YZS4	Burkholderia_virus	5.7e-11	45.0
WP_005659435.1\|1712378_1712588_-	ANR family transcriptional regulator	NA	NA	NA	NA
WP_005659432.1\|1712772_1713390_-	DUF3164 family protein	A0A0M3LQ92	Mannheimia_phage	3.1e-66	59.1
WP_005647090.1\|1713390_1713582_-	HTH domain-containing protein	F6MII8	Haemophilus_phage	9.5e-11	57.6
WP_005647009.1\|1713590_1713887_-	hypothetical protein	NA	NA	NA	NA
WP_005659430.1\|1713897_1714779_-	AAA family ATPase	A0A0M3LP72	Mannheimia_phage	2.9e-118	75.4
WP_005659426.1\|1714790_1716773_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	F6MII5	Haemophilus_phage	3.6e-193	53.3
WP_032827525.1\|1716787_1717051_-	Nlp family transcriptional regulator	F6MII4	Haemophilus_phage	1.7e-29	73.6
WP_005659422.1\|1717249_1717963_+	helix-turn-helix domain-containing protein	F6MII3	Haemophilus_phage	5.7e-40	43.2
1729037:1729058	attR	NA	NA	NA	NA

DBSCAN-SWA_5

1780268 : 1789336

Escherichia_phage(83.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_044345895.1\|1780268_1782113_+	ABC transporter ATP-binding protein	F2Y2R6	Organic_Lake_phycodnavirus	3.6e-22	29.0
WP_012054520.1\|1782237_1782516_-	heavy-metal-associated domain-containing protein	NA	NA	NA	NA
WP_105872514.1\|1782524_1782842_-	hypothetical protein	NA	NA	NA	NA
WP_044345896.1\|1782861_1783971_-	transglutaminase family protein	NA	NA	NA	NA
WP_044345898.1\|1784223_1786644_+	molybdopterin-dependent oxidoreductase	A0A077SK27	Escherichia_phage	5.3e-223	50.2
WP_042601957.1\|1786654_1787272_+	dimethylsulfoxide reductase subunit B	A0A077SL61	Escherichia_phage	1.3e-72	57.8
WP_005686309.1\|1787273_1788113_+	dimethyl sulfoxide reductase anchor subunit	A0A077SK59	Escherichia_phage	7.2e-18	31.5
WP_005686307.1\|1788224_1788836_+	Tat proofreading chaperone DmsD	A0A077SLS7	Escherichia_phage	2.3e-21	32.5
WP_005656004.1\|1788835_1789336_+	ferredoxin-type protein NapF	A0A077SLP0	Escherichia_phage	3.2e-13	32.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP007471

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection