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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP007472 Haemophilus influenzae strain 723 chromosome, complete genome 1 crisprs DEDDh,cas3,RT,DinG 0 0 143 0

Results visualization

1. NZ_CP007472
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP007472_1 1765160-1765308 Orphan NA
1 spacers
DEDDh

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 3628 3 Haemophilus_phage(66.67%) NA NA
DBSCAN-SWA_2 7701 : 12834 6 Acinetobacter_phage(33.33%) NA NA
DBSCAN-SWA_3 18636 : 21877 3 Planktothrix_phage(50.0%) NA NA
DBSCAN-SWA_4 25898 : 28581 2 Salinibacter_virus(50.0%) holin NA
DBSCAN-SWA_5 34675 : 48996 14 Bacillus_virus(25.0%) tRNA NA
DBSCAN-SWA_6 52427 : 60077 9 Pseudomonas_phage(16.67%) tRNA NA
DBSCAN-SWA_7 64272 : 74847 8 Moraxella_phage(25.0%) NA NA
DBSCAN-SWA_8 83511 : 87733 3 Micromonas_pusilla_virus(33.33%) protease NA
DBSCAN-SWA_9 99645 : 100302 1 Cellulophaga_phage(100.0%) NA NA
DBSCAN-SWA_10 104543 : 104996 1 Pseudomonas_phage(100.0%) protease NA
DBSCAN-SWA_11 111058 : 111277 1 Lactococcus_phage(100.0%) NA NA
DBSCAN-SWA_12 116001 : 117729 2 Cyanophage(50.0%) NA NA
DBSCAN-SWA_13 122224 : 122476 1 Mannheimia_phage(100.0%) NA NA
DBSCAN-SWA_14 126500 : 142743 24 Haemophilus_phage(42.11%) terminase,holin NA
DBSCAN-SWA_15 150811 : 167520 17 Acinetobacter_phage(33.33%) tRNA NA
DBSCAN-SWA_16 177835 : 181561 4 Streptococcus_phage(33.33%) tRNA NA
DBSCAN-SWA_17 187468 : 192951 3 Tupanvirus(50.0%) tRNA NA
DBSCAN-SWA_18 197261 : 199727 1 Dickeya_phage(100.0%) NA NA
DBSCAN-SWA_19 209803 : 300084 80 Mannheimia_phage(33.33%) protease,lysis,tRNA,tail,capsid,terminase,head,portal,plate NA
DBSCAN-SWA_20 303270 : 305310 1 Acidianus_filamentous_virus(100.0%) NA NA
DBSCAN-SWA_21 314183 : 318655 3 Streptococcus_phage(33.33%) NA NA
DBSCAN-SWA_22 325812 : 332131 5 Erysipelothrix_phage(25.0%) NA NA
DBSCAN-SWA_23 335521 : 335806 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_24 343421 : 346487 3 Bacillus_phage(50.0%) protease NA
DBSCAN-SWA_25 350134 : 353678 2 Colwellia_phage(50.0%) NA NA
DBSCAN-SWA_26 362131 : 364213 1 Moraxella_phage(100.0%) NA NA
DBSCAN-SWA_27 370271 : 374502 4 Campylobacter_virus(33.33%) NA NA
DBSCAN-SWA_28 385491 : 385680 1 Burkholderia_phage(100.0%) NA NA
DBSCAN-SWA_29 389450 : 406668 17 Ostreococcus_lucimarinus_virus(12.5%) tRNA NA
DBSCAN-SWA_30 414282 : 417838 3 Cedratvirus(50.0%) NA NA
DBSCAN-SWA_31 425720 : 430748 5 Anomala_cuprea_entomopoxvirus(33.33%) tRNA NA
DBSCAN-SWA_32 437255 : 446967 8 Bacillus_phage(33.33%) tRNA NA
DBSCAN-SWA_33 462104 : 473097 12 Planktothrix_phage(25.0%) NA NA
DBSCAN-SWA_34 477090 : 483356 7 Staphylococcus_phage(25.0%) NA NA
DBSCAN-SWA_35 490840 : 496075 4 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_36 501872 : 503970 3 Pithovirus(50.0%) NA NA
DBSCAN-SWA_37 526343 : 527297 1 Prochlorococcus_phage(100.0%) NA NA
DBSCAN-SWA_38 531172 : 533139 2 Bacillus_virus(50.0%) NA NA
DBSCAN-SWA_39 537782 : 538709 1 Prochlorococcus_phage(100.0%) NA NA
DBSCAN-SWA_40 548380 : 553511 4 Lactococcus_phage(50.0%) NA NA
DBSCAN-SWA_41 560683 : 563418 3 Planktothrix_phage(66.67%) NA NA
DBSCAN-SWA_42 569061 : 572473 3 Planktothrix_phage(33.33%) NA NA
DBSCAN-SWA_43 576931 : 580843 1 Catovirus(100.0%) NA NA
DBSCAN-SWA_44 590189 : 593152 2 Chrysochromulina_ericina_virus(50.0%) NA NA
DBSCAN-SWA_45 597447 : 609744 10 Escherichia_phage(66.67%) NA NA
DBSCAN-SWA_46 619582 : 620230 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_47 631914 : 632175 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_48 640753 : 648596 3 Rhizobium_phage(50.0%) NA NA
DBSCAN-SWA_49 652058 : 653606 1 Micromonas_sp._RCC1109_virus(100.0%) NA NA
DBSCAN-SWA_50 657974 : 658460 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_51 671461 : 690713 21 Indivirus(22.22%) tRNA NA
DBSCAN-SWA_52 701515 : 708189 6 Staphylococcus_phage(25.0%) NA NA
DBSCAN-SWA_53 715541 : 719095 2 Staphylococcus_phage(50.0%) tRNA NA
DBSCAN-SWA_54 727516 : 730757 3 Streptococcus_phage(50.0%) NA NA
DBSCAN-SWA_55 734896 : 739727 6 Vibrio_phage(33.33%) NA NA
DBSCAN-SWA_56 743630 : 752282 7 Leptospira_phage(33.33%) NA NA
DBSCAN-SWA_57 755516 : 764065 7 Prochlorococcus_phage(33.33%) NA NA
DBSCAN-SWA_58 767138 : 786416 14 Anguillid_herpesvirus(12.5%) NA NA
DBSCAN-SWA_59 799750 : 809728 11 Vibrio_phage(20.0%) NA NA
DBSCAN-SWA_60 812990 : 814511 1 Organic_Lake_phycodnavirus(100.0%) NA NA
DBSCAN-SWA_61 822972 : 831098 6 Klosneuvirus(25.0%) tRNA NA
DBSCAN-SWA_62 856678 : 915025 72 Haemophilus_phage(47.92%) tRNA,tail,transposase,capsid,terminase,head,protease,plate NA
DBSCAN-SWA_63 922035 : 928976 3 Streptococcus_phage(33.33%) NA NA
DBSCAN-SWA_64 940857 : 942717 1 Catovirus(100.0%) NA NA
DBSCAN-SWA_65 953415 : 954453 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_66 958357 : 961129 1 uncultured_Mediterranean_phage(100.0%) NA NA
DBSCAN-SWA_67 968531 : 969380 1 Enterococcus_phage(100.0%) NA NA
DBSCAN-SWA_68 987742 : 994074 9 Streptococcus_phage(20.0%) protease NA
DBSCAN-SWA_69 1000795 : 1006828 3 Tokyovirus(50.0%) tRNA NA
DBSCAN-SWA_70 1010070 : 1012853 4 Xanthomonas_phage(50.0%) NA NA
DBSCAN-SWA_71 1026014 : 1026809 1 Acanthocystis_turfacea_Chlorella_virus(100.0%) NA NA
DBSCAN-SWA_72 1040093 : 1040981 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_73 1049206 : 1052603 2 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_74 1056551 : 1076368 20 Tupanvirus(22.22%) NA NA
DBSCAN-SWA_75 1080463 : 1083815 2 Hokovirus(50.0%) NA NA
DBSCAN-SWA_76 1087424 : 1088060 1 Freshwater_phage(100.0%) NA NA
DBSCAN-SWA_77 1103052 : 1105037 3 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_78 1112891 : 1114458 2 Synechococcus_phage(50.0%) tRNA NA
DBSCAN-SWA_79 1118115 : 1118685 1 Rhizobium_phage(100.0%) NA NA
DBSCAN-SWA_80 1122054 : 1123239 1 Hokovirus(100.0%) NA NA
DBSCAN-SWA_81 1126292 : 1127018 1 Synechococcus_phage(100.0%) NA NA
DBSCAN-SWA_82 1131740 : 1139479 8 Macacine_betaherpesvirus(40.0%) transposase NA
DBSCAN-SWA_83 1144082 : 1150201 6 Cyanophage(66.67%) transposase NA
DBSCAN-SWA_84 1154324 : 1156284 2 Vibrio_phage(50.0%) NA NA
DBSCAN-SWA_85 1163785 : 1171358 7 Vibrio_phage(20.0%) tRNA NA
DBSCAN-SWA_86 1182778 : 1191305 2 Organic_Lake_phycodnavirus(50.0%) NA NA
DBSCAN-SWA_87 1194873 : 1200938 6 Caulobacter_phage(33.33%) NA NA
DBSCAN-SWA_88 1205697 : 1207032 1 Erwinia_phage(100.0%) NA NA
DBSCAN-SWA_89 1210739 : 1211342 1 Synechococcus_phage(100.0%) NA NA
DBSCAN-SWA_90 1222648 : 1226357 4 Klosneuvirus(50.0%) NA NA
DBSCAN-SWA_91 1230964 : 1236699 4 Catovirus(50.0%) NA NA
DBSCAN-SWA_92 1241419 : 1242052 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_93 1252122 : 1254078 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_94 1261177 : 1267730 7 Vibrio_phage(33.33%) NA NA
DBSCAN-SWA_95 1274135 : 1278341 3 uncultured_Mediterranean_phage(33.33%) tRNA NA
DBSCAN-SWA_96 1284611 : 1289518 5 Bodo_saltans_virus(33.33%) NA NA
DBSCAN-SWA_97 1293472 : 1299021 6 Streptococcus_phage(33.33%) NA NA
DBSCAN-SWA_98 1302511 : 1310596 6 Salmonella_phage(25.0%) tRNA NA
DBSCAN-SWA_99 1317307 : 1325024 10 unidentified_phage(20.0%) tRNA NA
DBSCAN-SWA_100 1331292 : 1332213 1 Brazilian_cedratvirus(100.0%) NA NA
DBSCAN-SWA_101 1335595 : 1339662 4 Bacillus_virus(66.67%) NA NA
DBSCAN-SWA_102 1356551 : 1357868 1 Erysipelothrix_phage(100.0%) NA NA
DBSCAN-SWA_103 1366661 : 1376918 12 Staphylococcus_phage(20.0%) tRNA NA
DBSCAN-SWA_104 1380528 : 1381740 1 Escherichia_phage(100.0%) integrase attL 1376657:1376673|attR 1386051:1386067
DBSCAN-SWA_105 1387754 : 1388309 1 Agrobacterium_phage(100.0%) NA NA
DBSCAN-SWA_106 1394527 : 1397753 4 uncultured_virus(100.0%) NA NA
DBSCAN-SWA_107 1407320 : 1408637 1 Burkholderia_virus(100.0%) NA NA
DBSCAN-SWA_108 1414228 : 1415671 1 Escherichia_phage(100.0%) tRNA NA
DBSCAN-SWA_109 1418764 : 1419610 1 Salicola_phage(100.0%) NA NA
DBSCAN-SWA_110 1432515 : 1433103 1 Ugandan_cassava_brown_streak_virus(100.0%) NA NA
DBSCAN-SWA_111 1439304 : 1450588 6 uncultured_Mediterranean_phage(50.0%) tRNA NA
DBSCAN-SWA_112 1453720 : 1454695 1 uncultured_Mediterranean_phage(100.0%) NA NA
DBSCAN-SWA_113 1458773 : 1460615 1 Diachasmimorpha_longicaudata_entomopoxvirus(100.0%) NA NA
DBSCAN-SWA_114 1467199 : 1473121 5 uncultured_Caudovirales_phage(33.33%) NA NA
DBSCAN-SWA_115 1480962 : 1501028 14 Staphylococcus_phage(25.0%) NA NA
DBSCAN-SWA_116 1507965 : 1511913 4 Morganella_phage(50.0%) NA NA
DBSCAN-SWA_117 1515288 : 1518108 3 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_118 1523328 : 1524465 1 Synechococcus_phage(100.0%) NA NA
DBSCAN-SWA_119 1529419 : 1535060 5 Tetraselmis_virus(66.67%) NA NA
DBSCAN-SWA_120 1545847 : 1547218 1 Erysipelothrix_phage(100.0%) NA NA
DBSCAN-SWA_121 1551662 : 1557409 6 Prochlorococcus_phage(25.0%) protease NA
DBSCAN-SWA_122 1570165 : 1571458 2 Salmonella_phage(50.0%) NA NA
DBSCAN-SWA_123 1576101 : 1579642 4 Saccharomonospora_phage(25.0%) NA NA
DBSCAN-SWA_124 1586386 : 1590794 3 Pandoravirus(50.0%) tRNA NA
DBSCAN-SWA_125 1601402 : 1602692 1 uncultured_Mediterranean_phage(100.0%) tRNA NA
DBSCAN-SWA_126 1612364 : 1622820 8 Gordonia_phage(25.0%) NA NA
DBSCAN-SWA_127 1630200 : 1631337 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_128 1638004 : 1647839 11 Faustovirus(16.67%) tRNA NA
DBSCAN-SWA_129 1656262 : 1666974 8 Bacillus_phage(40.0%) tRNA NA
DBSCAN-SWA_130 1670808 : 1674725 4 Moraxella_phage(50.0%) NA NA
DBSCAN-SWA_131 1682798 : 1686110 4 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_132 1689754 : 1691533 1 Organic_Lake_phycodnavirus(100.0%) NA NA
DBSCAN-SWA_133 1697482 : 1699543 2 Synechococcus_phage(50.0%) NA NA
DBSCAN-SWA_134 1710437 : 1715445 5 Equid_alphaherpesvirus(25.0%) NA NA
DBSCAN-SWA_135 1726760 : 1733166 5 Catovirus(33.33%) NA NA
DBSCAN-SWA_136 1746185 : 1750813 3 Streptococcus_phage(50.0%) NA NA
DBSCAN-SWA_137 1754673 : 1760260 5 Dickeya_phage(33.33%) NA NA
DBSCAN-SWA_138 1765429 : 1765978 1 Diachasmimorpha_longicaudata_entomopoxvirus(100.0%) NA NA
DBSCAN-SWA_139 1771376 : 1777638 5 Stx_converting_phage(25.0%) NA NA
DBSCAN-SWA_140 1791780 : 1792836 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_141 1801115 : 1802177 1 Bodo_saltans_virus(100.0%) protease NA
DBSCAN-SWA_142 1815584 : 1881707 77 Vibrio_phage(12.2%) tRNA,tail,terminase,integrase,portal,protease attL 1822368:1822384|attR 1845142:1845158
DBSCAN-SWA_143 1885558 : 1887181 1 Haemophilus_virus(100.0%) tail NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage