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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP010905 Clostridioides difficile 630 chromosome, complete genome 22 crisprs csa3,WYL,cas3,cas14j,DEDDh,DinG,PD-DExK,cas14k,cas5,cas7,cas6,cas2,cas1,cas4,cas8b2 4 46 10 1

Results visualization

1. NZ_CP010905
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010905_1 146708-146786 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010905_2 148720-148809 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010905_4 1110217-1110443 Orphan I-A
3 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010905_3 1109647-1110073 Orphan I-A
6 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010905_5 1195498-1195586 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010905_6 1419380-1420263 Orphan I-A
13 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010905_7 1629819-1630643 Orphan I-A
12 spacers
DinG

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010905_8 1740903-1741458 TypeV I-A
8 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010905_9 1920107-1921120 TypeV I-A
15 spacers
cas14j

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010905_10 2283228-2283395 Orphan I-A
2 spacers
csa3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010905_11 2647541-2648492 Orphan I-A
14 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010905_12 2810174-2810331 Unclear NA
2 spacers
cas3,cas5,cas7,cas6

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010905_13 2892089-2892514 Orphan I-A
6 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010905_14 3124102-3124427 Orphan NA
5 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010905_17 3179834-3179924 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010905_15 3179060-3179235 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010905_16 3179342-3179631 Orphan NA
4 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010905_18 3288485-3288696 Orphan NA
3 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010905_19 3381349-3381576 Orphan I-A
3 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010905_20 3381720-3382145 Orphan I-A
6 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010905_21 3440011-3441286 Unclear I-A
19 spacers
cas2,cas1,cas4,cas3,cas5,cas7,cas8b2,cas6,WYL

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010905_22 4134758-4134843 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP010905_2 2.1|148748|34|NZ_CP010905|CRISPRCasFinder 148748-148781 34 NZ_CP010905.2 17851-17884 0 1.0
NZ_CP010905_2 2.1|148748|34|NZ_CP010905|CRISPRCasFinder 148748-148781 34 NZ_CP010905.2 131191-131224 0 1.0
NZ_CP010905_2 2.1|148748|34|NZ_CP010905|CRISPRCasFinder 148748-148781 34 NZ_CP010905.2 138138-138171 0 1.0
NZ_CP010905_2 2.1|148748|34|NZ_CP010905|CRISPRCasFinder 148748-148781 34 NZ_CP010905.2 3137038-3137071 0 1.0
NZ_CP010905_5 5.1|1195525|35|NZ_CP010905|CRISPRCasFinder 1195525-1195559 35 NZ_CP010905.2 131253-131287 0 1.0
NZ_CP010905_5 5.1|1195525|35|NZ_CP010905|CRISPRCasFinder 1195525-1195559 35 NZ_CP010905.2 138200-138234 0 1.0
NZ_CP010905_8 8.2|1740998|36|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT 1740998-1741033 36 NZ_CP010905.2 1088288-1088323 0 1.0
NZ_CP010905_22 22.1|4134782|38|NZ_CP010905|CRISPRCasFinder 4134782-4134819 38 NZ_CP010905.2 12384-12421 0 1.0
NZ_CP010905_22 22.1|4134782|38|NZ_CP010905|CRISPRCasFinder 4134782-4134819 38 NZ_CP010905.2 3137046-3137083 0 1.0
NZ_CP010905_2 2.1|148748|34|NZ_CP010905|CRISPRCasFinder 148748-148781 34 NZ_CP010905.2 12396-12429 1 0.971
NZ_CP010905_2 2.1|148748|34|NZ_CP010905|CRISPRCasFinder 148748-148781 34 NZ_CP010905.2 1195463-1195496 1 0.971
NZ_CP010905_5 5.1|1195525|35|NZ_CP010905|CRISPRCasFinder 1195525-1195559 35 NZ_CP010905.2 17913-17947 1 0.971

1. spacer 2.1|148748|34|NZ_CP010905|CRISPRCasFinder matches to position: 17851-17884, mismatch: 0, identity: 1.0

aaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
aaactgaacgcatgtgaagtttgtttgttggcgc	Protospacer
**********************************

2. spacer 2.1|148748|34|NZ_CP010905|CRISPRCasFinder matches to position: 131191-131224, mismatch: 0, identity: 1.0

aaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
aaactgaacgcatgtgaagtttgtttgttggcgc	Protospacer
**********************************

3. spacer 2.1|148748|34|NZ_CP010905|CRISPRCasFinder matches to position: 138138-138171, mismatch: 0, identity: 1.0

aaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
aaactgaacgcatgtgaagtttgtttgttggcgc	Protospacer
**********************************

4. spacer 2.1|148748|34|NZ_CP010905|CRISPRCasFinder matches to position: 3137038-3137071, mismatch: 0, identity: 1.0

aaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
aaactgaacgcatgtgaagtttgtttgttggcgc	Protospacer
**********************************

5. spacer 5.1|1195525|35|NZ_CP010905|CRISPRCasFinder matches to position: 131253-131287, mismatch: 0, identity: 1.0

aatctgagtgaatacgaaggttgttcgttgacgtg	CRISPR spacer
aatctgagtgaatacgaaggttgttcgttgacgtg	Protospacer
***********************************

6. spacer 5.1|1195525|35|NZ_CP010905|CRISPRCasFinder matches to position: 138200-138234, mismatch: 0, identity: 1.0

aatctgagtgaatacgaaggttgttcgttgacgtg	CRISPR spacer
aatctgagtgaatacgaaggttgttcgttgacgtg	Protospacer
***********************************

7. spacer 8.2|1740998|36|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT matches to position: 1088288-1088323, mismatch: 0, identity: 1.0

atgttcacattgacagctcaagataaacatggaatt	CRISPR spacer
atgttcacattgacagctcaagataaacatggaatt	Protospacer
************************************

8. spacer 22.1|4134782|38|NZ_CP010905|CRISPRCasFinder matches to position: 12384-12421, mismatch: 0, identity: 1.0

aaacaaacttcacatgcgttcagtttattctgttgcta	CRISPR spacer
aaacaaacttcacatgcgttcagtttattctgttgcta	Protospacer
**************************************

9. spacer 22.1|4134782|38|NZ_CP010905|CRISPRCasFinder matches to position: 3137046-3137083, mismatch: 0, identity: 1.0

aaacaaacttcacatgcgttcagtttattctgttgcta	CRISPR spacer
aaacaaacttcacatgcgttcagtttattctgttgcta	Protospacer
**************************************

10. spacer 2.1|148748|34|NZ_CP010905|CRISPRCasFinder matches to position: 12396-12429, mismatch: 1, identity: 0.971

aaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
aaactgaacgcatgtgaagtttgtttgctggcgc	Protospacer
***************************.******

11. spacer 2.1|148748|34|NZ_CP010905|CRISPRCasFinder matches to position: 1195463-1195496, mismatch: 1, identity: 0.971

aaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
aaactgaacgcatgtaaagtttgtttgttggcgc	Protospacer
***************.******************

12. spacer 5.1|1195525|35|NZ_CP010905|CRISPRCasFinder matches to position: 17913-17947, mismatch: 1, identity: 0.971

aatctgagtgaatacgaaggttgttcgttgacgtg	CRISPR spacer
aatcttagtgaatacgaaggttgttcgttgacgtg	Protospacer
***** *****************************

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP010905_1 1.1|146733|29|NZ_CP010905|CRISPRCasFinder 146733-146761 29 NZ_CP033215 Clostridioides difficile strain 12038 plasmid unnamed1, complete sequence 5105-5133 0 1.0
NZ_CP010905_3 3.2|1109742|38|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT 1109742-1109779 38 NZ_CP020426 Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence 3550-3587 0 1.0
NZ_CP010905_3 3.2|1109742|38|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT 1109742-1109779 38 CP011970 Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence 118413-118450 0 1.0
NZ_CP010905_3 3.2|1109742|38|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT 1109742-1109779 38 LN681537 Clostridium phage phiCD211, complete genome 127275-127312 0 1.0
NZ_CP010905_6 6.8|1419872|36|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT 1419872-1419907 36 KU057941 Clostridium phage CDSH1, complete genome 30535-30570 0 1.0
NZ_CP010905_6 6.8|1419872|36|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT 1419872-1419907 36 LN881738 Escherichia phage slur17, complete genome 31486-31521 0 1.0
NZ_CP010905_6 6.8|1419872|36|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT 1419872-1419907 36 HM568888 Clostridium phage phiCD38-2, complete genome 30027-30062 0 1.0
NZ_CP010905_6 6.8|1419872|36|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT 1419872-1419907 36 NC_028958 Clostridium phage phiCD146, complete genome 29788-29823 0 1.0
NZ_CP010905_8 8.2|1740998|36|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT 1740998-1741033 36 AY855346 Clostridium difficile bacteriophage phi CD119, complete genome 42830-42865 0 1.0
NZ_CP010905_8 8.2|1740998|36|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT 1740998-1741033 36 NC_007917 Clostridium phage phi CD119, complete genome 42830-42865 0 1.0
NZ_CP010905_8 8.2|1740998|36|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT 1740998-1741033 36 NC_028996 Clostridium phage phiCDHM19, complete genome 45842-45877 0 1.0
NZ_CP010905_8 8.2|1740998|36|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT 1740998-1741033 36 LN681542 Clostridium phage phiMMP03, complete genome 44801-44836 0 1.0
NZ_CP010905_8 8.2|1740998|36|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT 1740998-1741033 36 HG531805 Clostridium phage CDMH1 complete genome 46164-46199 0 1.0
NZ_CP010905_8 8.2|1740998|36|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT 1740998-1741033 36 JX145341 Clostridium phage phiMMP02, complete genome 43079-43114 0 1.0
NZ_CP010905_8 8.2|1740998|36|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT 1740998-1741033 36 NC_048642 Clostridium phage CDKM9, complete genome 45167-45202 0 1.0
NZ_CP010905_8 8.2|1740998|36|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT 1740998-1741033 36 KX228400 Clostridium phage CDKM15, complete genome 45323-45358 0 1.0
NZ_CP010905_8 8.4|1741129|37|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT 1741129-1741165 37 HM568888 Clostridium phage phiCD38-2, complete genome 8824-8860 0 1.0
NZ_CP010905_9 9.1|1920136|38|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT 1920136-1920173 38 LN681539 Clostridium phage phiCD505, complete genome 3276-3313 0 1.0
NZ_CP010905_9 9.1|1920136|38|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT 1920136-1920173 38 JX145341 Clostridium phage phiMMP02, complete genome 3275-3312 0 1.0
NZ_CP010905_9 9.1|1920136|38|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT 1920136-1920173 38 NC_011398 Clostridium phage phiCD27, complete genome 3267-3304 0 1.0
NZ_CP010905_9 9.1|1920136|38|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT 1920136-1920173 38 NC_048642 Clostridium phage CDKM9, complete genome 3214-3251 0 1.0
NZ_CP010905_9 9.1|1920136|38|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT 1920136-1920173 38 KX228400 Clostridium phage CDKM15, complete genome 3214-3251 0 1.0
NZ_CP010905_9 9.2|1920203|37|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT 1920203-1920239 37 GU949551 Clostridium phage phiCD6356, complete genome 17655-17691 0 1.0
NZ_CP010905_9 9.4|1920335|36|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT 1920335-1920370 36 KU057941 Clostridium phage CDSH1, complete genome 31710-31745 0 1.0
NZ_CP010905_9 9.4|1920335|36|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT 1920335-1920370 36 HM568888 Clostridium phage phiCD38-2, complete genome 31202-31237 0 1.0
NZ_CP010905_9 9.4|1920335|36|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT 1920335-1920370 36 NC_028958 Clostridium phage phiCD146, complete genome 30715-30750 0 1.0
NZ_CP010905_9 9.4|1920335|36|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT 1920335-1920370 36 LN881738 Escherichia phage slur17, complete genome 30311-30346 0 1.0
NZ_CP010905_9 9.6|1920466|36|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT 1920466-1920501 36 FN668942 Clostridium difficile BI1 plasmid pCDBI1, complete sequence 3429-3464 0 1.0
NZ_CP010905_9 9.15|1921055|37|NZ_CP010905|CRISPRCasFinder,CRT 1921055-1921091 37 NZ_MF547664 Clostridioides difficile strain LIBA-6289 plasmid LIBA6289, complete sequence 33648-33684 0 1.0
NZ_CP010905_11 11.13|2648362|36|NZ_CP010905|CRISPRCasFinder,CRT,PILER-CR 2648362-2648397 36 NC_011398 Clostridium phage phiCD27, complete genome 15745-15780 0 1.0
NZ_CP010905_11 11.13|2648362|36|NZ_CP010905|CRISPRCasFinder,CRT,PILER-CR 2648362-2648397 36 KX228400 Clostridium phage CDKM15, complete genome 15888-15923 0 1.0
NZ_CP010905_11 11.14|2648427|37|NZ_CP010905|CRISPRCasFinder,CRT,PILER-CR 2648427-2648463 37 LN681539 Clostridium phage phiCD505, complete genome 5459-5495 0 1.0
NZ_CP010905_11 11.14|2648427|37|NZ_CP010905|CRISPRCasFinder,CRT,PILER-CR 2648427-2648463 37 JX145341 Clostridium phage phiMMP02, complete genome 5458-5494 0 1.0
NZ_CP010905_11 11.14|2648427|37|NZ_CP010905|CRISPRCasFinder,CRT,PILER-CR 2648427-2648463 37 NC_011398 Clostridium phage phiCD27, complete genome 5450-5486 0 1.0
NZ_CP010905_11 11.14|2648427|37|NZ_CP010905|CRISPRCasFinder,CRT,PILER-CR 2648427-2648463 37 NC_048642 Clostridium phage CDKM9, complete genome 5397-5433 0 1.0
NZ_CP010905_11 11.14|2648427|37|NZ_CP010905|CRISPRCasFinder,CRT,PILER-CR 2648427-2648463 37 KX228400 Clostridium phage CDKM15, complete genome 5397-5433 0 1.0
NZ_CP010905_20 20.5|3382013|38|NZ_CP010905|CRISPRCasFinder,CRT,PILER-CR 3382013-3382050 38 NZ_CP020426 Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence 3550-3587 0 1.0
NZ_CP010905_20 20.5|3382013|38|NZ_CP010905|CRISPRCasFinder,CRT,PILER-CR 3382013-3382050 38 CP011970 Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence 118413-118450 0 1.0
NZ_CP010905_20 20.5|3382013|38|NZ_CP010905|CRISPRCasFinder,CRT,PILER-CR 3382013-3382050 38 LN681537 Clostridium phage phiCD211, complete genome 127275-127312 0 1.0
NZ_CP010905_21 21.8|3440497|37|NZ_CP010905|CRISPRCasFinder,CRT,PILER-CR 3440497-3440533 37 NZ_CP020426 Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence 1094-1130 0 1.0
NZ_CP010905_21 21.8|3440497|37|NZ_CP010905|CRISPRCasFinder,CRT,PILER-CR 3440497-3440533 37 CP011970 Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence 120870-120906 0 1.0
NZ_CP010905_21 21.8|3440497|37|NZ_CP010905|CRISPRCasFinder,CRT,PILER-CR 3440497-3440533 37 LN681537 Clostridium phage phiCD211, complete genome 129732-129768 0 1.0
NZ_CP010905_21 21.9|3440563|36|NZ_CP010905|CRISPRCasFinder,CRT,PILER-CR 3440563-3440598 36 NZ_CP020426 Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence 3077-3112 0 1.0
NZ_CP010905_21 21.9|3440563|36|NZ_CP010905|CRISPRCasFinder,CRT,PILER-CR 3440563-3440598 36 CP011970 Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence 118888-118923 0 1.0
NZ_CP010905_21 21.9|3440563|36|NZ_CP010905|CRISPRCasFinder,CRT,PILER-CR 3440563-3440598 36 LN681537 Clostridium phage phiCD211, complete genome 127750-127785 0 1.0
NZ_CP010905_21 21.18|3441155|37|NZ_CP010905|CRISPRCasFinder,CRT,PILER-CR 3441155-3441191 37 GU949551 Clostridium phage phiCD6356, complete genome 13484-13520 0 1.0
NZ_CP010905_21 21.19|3441221|37|NZ_CP010905|CRISPRCasFinder,CRT,PILER-CR 3441221-3441257 37 LN681539 Clostridium phage phiCD505, complete genome 5442-5478 0 1.0
NZ_CP010905_21 21.19|3441221|37|NZ_CP010905|CRISPRCasFinder,CRT,PILER-CR 3441221-3441257 37 JX145341 Clostridium phage phiMMP02, complete genome 5441-5477 0 1.0
NZ_CP010905_21 21.19|3441221|37|NZ_CP010905|CRISPRCasFinder,CRT,PILER-CR 3441221-3441257 37 NC_011398 Clostridium phage phiCD27, complete genome 5433-5469 0 1.0
NZ_CP010905_21 21.19|3441221|37|NZ_CP010905|CRISPRCasFinder,CRT,PILER-CR 3441221-3441257 37 NC_048642 Clostridium phage CDKM9, complete genome 5380-5416 0 1.0
NZ_CP010905_21 21.19|3441221|37|NZ_CP010905|CRISPRCasFinder,CRT,PILER-CR 3441221-3441257 37 KX228400 Clostridium phage CDKM15, complete genome 5380-5416 0 1.0
NZ_CP010905_2 2.1|148748|34|NZ_CP010905|CRISPRCasFinder 148748-148781 34 NZ_CP033215 Clostridioides difficile strain 12038 plasmid unnamed1, complete sequence 3086-3119 1 0.971
NZ_CP010905_4 4.3|1110378|37|NZ_CP010905|CRISPRCasFinder 1110378-1110414 37 LN681542 Clostridium phage phiMMP03, complete genome 14321-14357 1 0.973
NZ_CP010905_4 4.3|1110378|37|NZ_CP010905|CRISPRCasFinder 1110378-1110414 37 HG531805 Clostridium phage CDMH1 complete genome 15461-15497 1 0.973
NZ_CP010905_4 4.3|1110378|37|NZ_CP010905|CRISPRCasFinder 1110378-1110414 37 NC_009231 Clostridium phage phiC2, complete genome 14352-14388 1 0.973
NZ_CP010905_4 4.3|1110378|37|NZ_CP010905|CRISPRCasFinder 1110378-1110414 37 LN681541 Clostridium phage phiMMP01, complete genome 14321-14357 1 0.973
NZ_CP010905_6 6.8|1419872|36|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT 1419872-1419907 36 NC_048665 Clostridium phage phiCDHM14, complete genome 23384-23419 1 0.972
NZ_CP010905_6 6.8|1419872|36|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT 1419872-1419907 36 HG796225 Clostridium phage phiCDHM13 complete genome 22885-22920 1 0.972
NZ_CP010905_6 6.8|1419872|36|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT 1419872-1419907 36 LN681538 Clostridium phage phiCD481-1, complete genome 22624-22659 1 0.972
NZ_CP010905_6 6.8|1419872|36|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT 1419872-1419907 36 HG798901 Clostridium phage phiCDHM11 complete genome 22884-22919 1 0.972
NZ_CP010905_6 6.8|1419872|36|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT 1419872-1419907 36 MK473382 Clostridium phage JD032, complete genome 10295-10330 1 0.972
NZ_CP010905_6 6.8|1419872|36|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT 1419872-1419907 36 NC_028838 Clostridium phage phiCD506, complete genome 23957-23992 1 0.972
NZ_CP010905_8 8.4|1741129|37|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT 1741129-1741165 37 NC_028958 Clostridium phage phiCD146, complete genome 8836-8872 1 0.973
NZ_CP010905_8 8.8|1741391|39|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT 1741391-1741429 39 LN681539 Clostridium phage phiCD505, complete genome 12854-12892 1 0.974
NZ_CP010905_8 8.8|1741391|39|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT 1741391-1741429 39 NC_048642 Clostridium phage CDKM9, complete genome 12792-12830 1 0.974
NZ_CP010905_8 8.8|1741391|39|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT 1741391-1741429 39 KX228400 Clostridium phage CDKM15, complete genome 12985-13023 1 0.974
NZ_CP010905_9 9.4|1920335|36|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT 1920335-1920370 36 NC_028905 Clostridium phage phiCD111, complete genome 31503-31538 1 0.972
NZ_CP010905_9 9.6|1920466|36|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT 1920466-1920501 36 KX905163 Clostridioides phage phiSemix9P1, complete genome 6526-6561 1 0.972
NZ_CP010905_19 19.1|3381378|37|NZ_CP010905|CRISPRCasFinder 3381378-3381414 37 LN681542 Clostridium phage phiMMP03, complete genome 14321-14357 1 0.973
NZ_CP010905_19 19.1|3381378|37|NZ_CP010905|CRISPRCasFinder 3381378-3381414 37 HG531805 Clostridium phage CDMH1 complete genome 15461-15497 1 0.973
NZ_CP010905_19 19.1|3381378|37|NZ_CP010905|CRISPRCasFinder 3381378-3381414 37 NC_009231 Clostridium phage phiC2, complete genome 14352-14388 1 0.973
NZ_CP010905_19 19.1|3381378|37|NZ_CP010905|CRISPRCasFinder 3381378-3381414 37 LN681541 Clostridium phage phiMMP01, complete genome 14321-14357 1 0.973
NZ_CP010905_21 21.5|3440300|36|NZ_CP010905|CRISPRCasFinder,CRT,PILER-CR 3440300-3440335 36 NC_028996 Clostridium phage phiCDHM19, complete genome 43914-43949 1 0.972
NZ_CP010905_21 21.5|3440300|36|NZ_CP010905|CRISPRCasFinder,CRT,PILER-CR 3440300-3440335 36 LN681541 Clostridium phage phiMMP01, complete genome 39332-39367 1 0.972
NZ_CP010905_21 21.5|3440300|36|NZ_CP010905|CRISPRCasFinder,CRT,PILER-CR 3440300-3440335 36 NC_011398 Clostridium phage phiCD27, complete genome 41962-41997 1 0.972
NZ_CP010905_21 21.5|3440300|36|NZ_CP010905|CRISPRCasFinder,CRT,PILER-CR 3440300-3440335 36 NC_048642 Clostridium phage CDKM9, complete genome 43238-43273 1 0.972
NZ_CP010905_21 21.7|3440431|37|NZ_CP010905|CRISPRCasFinder,CRT,PILER-CR 3440431-3440467 37 MF547662 Clostridioides phage LIBA6276, complete genome 130603-130639 1 0.973
NZ_CP010905_21 21.8|3440497|37|NZ_CP010905|CRISPRCasFinder,CRT,PILER-CR 3440497-3440533 37 MF547662 Clostridioides phage LIBA6276, complete genome 122145-122181 1 0.973
NZ_CP010905_21 21.8|3440497|37|NZ_CP010905|CRISPRCasFinder,CRT,PILER-CR 3440497-3440533 37 MF547663 Clostridioides phage LIBA2945, complete genome 120408-120444 1 0.973
NZ_CP010905_4 4.2|1110312|37|NZ_CP010905|CRISPRCasFinder 1110312-1110348 37 JX145341 Clostridium phage phiMMP02, complete genome 10860-10896 2 0.946
NZ_CP010905_4 4.2|1110312|37|NZ_CP010905|CRISPRCasFinder 1110312-1110348 37 NC_011398 Clostridium phage phiCD27, complete genome 10852-10888 2 0.946
NZ_CP010905_6 6.13|1420199|36|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT 1420199-1420234 36 NC_028996 Clostridium phage phiCDHM19, complete genome 34840-34875 2 0.944
NZ_CP010905_8 8.2|1740998|36|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT 1740998-1741033 36 LN681539 Clostridium phage phiCD505, complete genome 43012-43047 2 0.944
NZ_CP010905_8 8.2|1740998|36|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT 1740998-1741033 36 NC_009231 Clostridium phage phiC2, complete genome 48338-48373 2 0.944
NZ_CP010905_8 8.7|1741325|37|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT 1741325-1741361 37 MF547662 Clostridioides phage LIBA6276, complete genome 123178-123214 2 0.946
NZ_CP010905_8 8.7|1741325|37|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT 1741325-1741361 37 MF547663 Clostridioides phage LIBA2945, complete genome 121441-121477 2 0.946
NZ_CP010905_9 9.3|1920269|37|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT 1920269-1920305 37 MK473382 Clostridium phage JD032, complete genome 7100-7136 2 0.946
NZ_CP010905_9 9.11|1920794|35|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT 1920794-1920828 35 LN881738 Escherichia phage slur17, complete genome 23273-23307 2 0.943
NZ_CP010905_9 9.11|1920794|35|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT 1920794-1920828 35 KU057941 Clostridium phage CDSH1, complete genome 38749-38783 2 0.943
NZ_CP010905_9 9.11|1920794|35|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT 1920794-1920828 35 HM568888 Clostridium phage phiCD38-2, complete genome 38247-38281 2 0.943
NZ_CP010905_9 9.11|1920794|35|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT 1920794-1920828 35 NC_028958 Clostridium phage phiCD146, complete genome 38400-38434 2 0.943
NZ_CP010905_10 10.1|2283264|36|NZ_CP010905|PILER-CR 2283264-2283299 36 KU057941 Clostridium phage CDSH1, complete genome 4452-4487 2 0.944
NZ_CP010905_10 10.1|2283264|36|NZ_CP010905|PILER-CR 2283264-2283299 36 NC_028958 Clostridium phage phiCD146, complete genome 4485-4520 2 0.944
NZ_CP010905_10 10.1|2283264|36|NZ_CP010905|PILER-CR 2283264-2283299 36 LN680008 Clostridium phage phiCDHS1 gp04 gene for putative capsid protein 1022-1057 2 0.944
NZ_CP010905_10 10.1|2283264|36|NZ_CP010905|PILER-CR 2283264-2283299 36 LN881738 Escherichia phage slur17, complete genome 15950-15985 2 0.944
NZ_CP010905_11 11.1|2647570|36|NZ_CP010905|CRISPRCasFinder,CRT 2647570-2647605 36 NZ_MG973074 Clostridioides difficile strain HSJD-312 plasmid pHSJD-312, complete sequence 22132-22167 2 0.944
NZ_CP010905_19 19.2|3381444|37|NZ_CP010905|CRISPRCasFinder 3381444-3381480 37 JX145341 Clostridium phage phiMMP02, complete genome 10860-10896 2 0.946
NZ_CP010905_19 19.2|3381444|37|NZ_CP010905|CRISPRCasFinder 3381444-3381480 37 NC_011398 Clostridium phage phiCD27, complete genome 10852-10888 2 0.946
NZ_CP010905_22 22.1|4134782|38|NZ_CP010905|CRISPRCasFinder 4134782-4134819 38 NZ_CP033215 Clostridioides difficile strain 12038 plasmid unnamed1, complete sequence 3094-3131 2 0.947
NZ_CP010905_4 4.5|1110314|38|NZ_CP010905|PILER-CR 1110314-1110351 38 JX145341 Clostridium phage phiMMP02, complete genome 10859-10896 3 0.921
NZ_CP010905_4 4.5|1110314|38|NZ_CP010905|PILER-CR 1110314-1110351 38 NC_011398 Clostridium phage phiCD27, complete genome 10851-10888 3 0.921
NZ_CP010905_6 6.8|1419872|36|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT 1419872-1419907 36 NC_028905 Clostridium phage phiCD111, complete genome 30330-30365 3 0.917
NZ_CP010905_6 6.13|1420199|36|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT 1420199-1420234 36 AY855346 Clostridium difficile bacteriophage phi CD119, complete genome 31152-31187 3 0.917
NZ_CP010905_6 6.13|1420199|36|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT 1420199-1420234 36 NC_007917 Clostridium phage phi CD119, complete genome 31152-31187 3 0.917
NZ_CP010905_8 8.8|1741391|39|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT 1741391-1741429 39 NC_011398 Clostridium phage phiCD27, complete genome 12842-12880 3 0.923
NZ_CP010905_19 19.4|3381387|39|NZ_CP010905|PILER-CR 3381387-3381425 39 LN681542 Clostridium phage phiMMP03, complete genome 14320-14358 3 0.923
NZ_CP010905_19 19.4|3381387|39|NZ_CP010905|PILER-CR 3381387-3381425 39 HG531805 Clostridium phage CDMH1 complete genome 15460-15498 3 0.923
NZ_CP010905_19 19.4|3381387|39|NZ_CP010905|PILER-CR 3381387-3381425 39 NC_009231 Clostridium phage phiC2, complete genome 14351-14389 3 0.923
NZ_CP010905_19 19.4|3381387|39|NZ_CP010905|PILER-CR 3381387-3381425 39 LN681541 Clostridium phage phiMMP01, complete genome 14320-14358 3 0.923
NZ_CP010905_19 19.5|3381455|38|NZ_CP010905|PILER-CR 3381455-3381492 38 JX145341 Clostridium phage phiMMP02, complete genome 10860-10897 3 0.921
NZ_CP010905_19 19.5|3381455|38|NZ_CP010905|PILER-CR 3381455-3381492 38 NC_011398 Clostridium phage phiCD27, complete genome 10852-10889 3 0.921
NZ_CP010905_18 18.3|3288646|25|NZ_CP010905|CRISPRCasFinder 3288646-3288670 25 MN694568 Marine virus AFVG_250M879, complete genome 12134-12158 4 0.84
NZ_CP010905_18 18.3|3288646|25|NZ_CP010905|CRISPRCasFinder 3288646-3288670 25 HQ634174 Cyanophage MED4-213, complete genome 98055-98079 4 0.84
NZ_CP010905_18 18.3|3288646|25|NZ_CP010905|CRISPRCasFinder 3288646-3288670 25 GU071101 Prochlorococcus phage P-HM1, complete genome 15695-15719 4 0.84
NZ_CP010905_9 9.3|1920269|37|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT 1920269-1920305 37 NC_028838 Clostridium phage phiCD506, complete genome 27152-27188 5 0.865
NZ_CP010905_1 1.1|146733|29|NZ_CP010905|CRISPRCasFinder 146733-146761 29 KY971610 Pseudomonas phage PspYZU05, complete genome 134239-134267 6 0.793
NZ_CP010905_7 7.6|1630181|38|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT 1630181-1630218 38 NZ_CP016840 Brochothrix thermosphacta strain TMW 2.1564 plasmid pL21564-1, complete sequence 16051-16088 6 0.842
NZ_CP010905_10 10.2|2283336|30|NZ_CP010905|PILER-CR 2283336-2283365 30 MN694267 Marine virus AFVG_250M705, complete genome 29033-29062 6 0.8
NZ_CP010905_11 11.11|2648228|38|NZ_CP010905|CRISPRCasFinder,CRT,PILER-CR 2648228-2648265 38 AY855346 Clostridium difficile bacteriophage phi CD119, complete genome 9402-9439 6 0.842
NZ_CP010905_11 11.11|2648228|38|NZ_CP010905|CRISPRCasFinder,CRT,PILER-CR 2648228-2648265 38 NC_007917 Clostridium phage phi CD119, complete genome 9402-9439 6 0.842
NZ_CP010905_11 11.11|2648228|38|NZ_CP010905|CRISPRCasFinder,CRT,PILER-CR 2648228-2648265 38 NC_028996 Clostridium phage phiCDHM19, complete genome 9648-9685 6 0.842
NZ_CP010905_18 18.1|3288511|31|NZ_CP010905|CRISPRCasFinder 3288511-3288541 31 MG869618 Polaromonas sp. E5S plasmid pE5SP1, complete sequence 53570-53600 7 0.774
NZ_CP010905_9 9.13|1920924|36|NZ_CP010905|CRISPRCasFinder,CRT 1920924-1920959 36 NZ_LR134399 Listeria monocytogenes strain NCTC7974 plasmid 2, complete sequence 251200-251235 8 0.778
NZ_CP010905_9 9.15|1921055|37|NZ_CP010905|CRISPRCasFinder,CRT 1921055-1921091 37 NZ_CP017256 Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence 5594-5630 8 0.784
NZ_CP010905_18 18.1|3288511|31|NZ_CP010905|CRISPRCasFinder 3288511-3288541 31 LR606148 Rhizobium sp. Q54 genome assembly, plasmid: 5 444883-444913 8 0.742
NZ_CP010905_7 7.3|1629980|37|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT 1629980-1630016 37 NZ_KY940428 UNVERIFIED: Bacillus sp. (in: Bacteria) strain PUMK-07 plasmid pMK-07, complete sequence 17267-17303 9 0.757
NZ_CP010905_7 7.3|1629980|37|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT 1629980-1630016 37 NZ_CP047087 Bacillus paranthracis strain BC307 plasmid pCE2, complete sequence 27140-27176 9 0.757
NZ_CP010905_7 7.3|1629980|37|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT 1629980-1630016 37 NZ_CP041978 Bacillus pacificus strain NCCP 15909 plasmid unnamed1, complete sequence 209260-209296 9 0.757
NZ_CP010905_7 7.3|1629980|37|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT 1629980-1630016 37 CP041980 Bacillus paranthracis strain NCCP 15910 plasmid unnamed, complete sequence 192210-192246 9 0.757
NZ_CP010905_7 7.3|1629980|37|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT 1629980-1630016 37 CP041752 Bacillus paranthracis strain NCCP 14796 plasmid unnamed2, complete sequence 23649-23685 9 0.757
NZ_CP010905_7 7.3|1629980|37|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT 1629980-1630016 37 NZ_CP040343 Bacillus cereus strain DLOU-Weihai plasmid unnamed1, complete sequence 251192-251228 9 0.757
NZ_CP010905_9 9.15|1921055|37|NZ_CP010905|CRISPRCasFinder,CRT 1921055-1921091 37 NZ_CP047434 Spiroplasma citri strain BLH-13 plasmid pSciBLH13-6 24856-24892 9 0.757
NZ_CP010905_18 18.1|3288511|31|NZ_CP010905|CRISPRCasFinder 3288511-3288541 31 NZ_MK748464 Candidatus Endohaliclona renieramycinifaciens plasmid p-ren_Ren-PNG-07060 clone Ren-PNG-07060, complete sequence 24257-24287 9 0.71
NZ_CP010905_18 18.1|3288511|31|NZ_CP010905|CRISPRCasFinder 3288511-3288541 31 NZ_MK748465 Candidatus Endohaliclona renieramycinifaciens plasmid p-ren_Ren-PNG-07113 clone Ren-PNG-07113, complete sequence 24334-24364 9 0.71
NZ_CP010905_18 18.1|3288511|31|NZ_CP010905|CRISPRCasFinder 3288511-3288541 31 NZ_MK748462 Candidatus Endohaliclona renieramycinifaciens plasmid p-ren_Ren-Bali-16-03 clone Ren-Bali-16-03, complete sequence 24337-24367 9 0.71
NZ_CP010905_18 18.1|3288511|31|NZ_CP010905|CRISPRCasFinder 3288511-3288541 31 NZ_MK748463 Candidatus Endohaliclona renieramycinifaciens plasmid p-ren_Ren-Pal-02 clone Ren-Pal-02, complete sequence 24326-24356 9 0.71
NZ_CP010905_9 9.15|1921055|37|NZ_CP010905|CRISPRCasFinder,CRT 1921055-1921091 37 NZ_CP035115 Lactobacillus plantarum strain SRCM103295 plasmid unnamed2 17114-17150 10 0.73
NZ_CP010905_9 9.15|1921055|37|NZ_CP010905|CRISPRCasFinder,CRT 1921055-1921091 37 NZ_CP035567 Lactobacillus plantarum strain SRCM103300 plasmid unnamed1 50389-50425 10 0.73
NZ_CP010905_11 11.1|2647570|36|NZ_CP010905|CRISPRCasFinder,CRT 2647570-2647605 36 NZ_CP045274 Bacillus megaterium strain FDU301 plasmid pFDU301B, complete sequence 47033-47068 10 0.722
NZ_CP010905_11 11.13|2648362|36|NZ_CP010905|CRISPRCasFinder,CRT,PILER-CR 2648362-2648397 36 AP014113 Uncultured Mediterranean phage uvMED isolate uvMED-GF-C35-MedDCM-OCT-S46-C200, *** SEQUENCING IN PROGRESS *** 269-304 10 0.722
NZ_CP010905_14 14.1|3124128|34|NZ_CP010905|CRISPRCasFinder 3124128-3124161 34 MN856057 Bacteriophage sp. isolate 161, complete genome 9470-9503 10 0.706
NZ_CP010905_14 14.1|3124128|34|NZ_CP010905|CRISPRCasFinder 3124128-3124161 34 MN855979 Bacteriophage sp. isolate 144, complete genome 12547-12580 10 0.706
NZ_CP010905_3 3.5|1109941|37|NZ_CP010905|CRISPRCasFinder,CRT 1109941-1109977 37 LC557520 Staphylococcus phage vB_SsapH-Golestan101-M DNA, complete genome 15673-15709 11 0.703
NZ_CP010905_11 11.10|2648162|37|NZ_CP010905|CRISPRCasFinder,CRT,PILER-CR 2648162-2648198 37 NC_018878 Bacillus thuringiensis Bt407 plasmid BTB_502p, complete sequence 269698-269734 11 0.703
NZ_CP010905_14 14.1|3124128|34|NZ_CP010905|CRISPRCasFinder 3124128-3124161 34 NZ_CP022366 Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence 547093-547126 11 0.676
NZ_CP010905_20 20.2|3381815|37|NZ_CP010905|CRISPRCasFinder,CRT 3381815-3381851 37 LC557520 Staphylococcus phage vB_SsapH-Golestan101-M DNA, complete genome 15673-15709 11 0.703

1. spacer 1.1|146733|29|NZ_CP010905|CRISPRCasFinder matches to NZ_CP033215 (Clostridioides difficile strain 12038 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tgtaataagttaaagcaatatgaatcaac	CRISPR spacer
tgtaataagttaaagcaatatgaatcaac	Protospacer
*****************************

2. spacer 3.2|1109742|38|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020426 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

aactcttcaatatctcctaatcgttcaatataattctc	CRISPR spacer
aactcttcaatatctcctaatcgttcaatataattctc	Protospacer
**************************************

3. spacer 3.2|1109742|38|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT matches to CP011970 (Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence) position: , mismatch: 0, identity: 1.0

aactcttcaatatctcctaatcgttcaatataattctc	CRISPR spacer
aactcttcaatatctcctaatcgttcaatataattctc	Protospacer
**************************************

4. spacer 3.2|1109742|38|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT matches to LN681537 (Clostridium phage phiCD211, complete genome) position: , mismatch: 0, identity: 1.0

aactcttcaatatctcctaatcgttcaatataattctc	CRISPR spacer
aactcttcaatatctcctaatcgttcaatataattctc	Protospacer
**************************************

5. spacer 6.8|1419872|36|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 0, identity: 1.0

ataagagtggtttaagaaaataagttatttttcaaa	CRISPR spacer
ataagagtggtttaagaaaataagttatttttcaaa	Protospacer
************************************

6. spacer 6.8|1419872|36|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 0, identity: 1.0

ataagagtggtttaagaaaataagttatttttcaaa	CRISPR spacer
ataagagtggtttaagaaaataagttatttttcaaa	Protospacer
************************************

7. spacer 6.8|1419872|36|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 0, identity: 1.0

ataagagtggtttaagaaaataagttatttttcaaa	CRISPR spacer
ataagagtggtttaagaaaataagttatttttcaaa	Protospacer
************************************

8. spacer 6.8|1419872|36|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 0, identity: 1.0

ataagagtggtttaagaaaataagttatttttcaaa	CRISPR spacer
ataagagtggtttaagaaaataagttatttttcaaa	Protospacer
************************************

9. spacer 8.2|1740998|36|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT matches to AY855346 (Clostridium difficile bacteriophage phi CD119, complete genome) position: , mismatch: 0, identity: 1.0

atgttcacattgacagctcaagataaacatggaatt	CRISPR spacer
atgttcacattgacagctcaagataaacatggaatt	Protospacer
************************************

10. spacer 8.2|1740998|36|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT matches to NC_007917 (Clostridium phage phi CD119, complete genome) position: , mismatch: 0, identity: 1.0

atgttcacattgacagctcaagataaacatggaatt	CRISPR spacer
atgttcacattgacagctcaagataaacatggaatt	Protospacer
************************************

11. spacer 8.2|1740998|36|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT matches to NC_028996 (Clostridium phage phiCDHM19, complete genome) position: , mismatch: 0, identity: 1.0

atgttcacattgacagctcaagataaacatggaatt	CRISPR spacer
atgttcacattgacagctcaagataaacatggaatt	Protospacer
************************************

12. spacer 8.2|1740998|36|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT matches to LN681542 (Clostridium phage phiMMP03, complete genome) position: , mismatch: 0, identity: 1.0

atgttcacattgacagctcaagataaacatggaatt	CRISPR spacer
atgttcacattgacagctcaagataaacatggaatt	Protospacer
************************************

13. spacer 8.2|1740998|36|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT matches to HG531805 (Clostridium phage CDMH1 complete genome) position: , mismatch: 0, identity: 1.0

atgttcacattgacagctcaagataaacatggaatt	CRISPR spacer
atgttcacattgacagctcaagataaacatggaatt	Protospacer
************************************

14. spacer 8.2|1740998|36|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT matches to JX145341 (Clostridium phage phiMMP02, complete genome) position: , mismatch: 0, identity: 1.0

atgttcacattgacagctcaagataaacatggaatt	CRISPR spacer
atgttcacattgacagctcaagataaacatggaatt	Protospacer
************************************

15. spacer 8.2|1740998|36|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT matches to NC_048642 (Clostridium phage CDKM9, complete genome) position: , mismatch: 0, identity: 1.0

atgttcacattgacagctcaagataaacatggaatt	CRISPR spacer
atgttcacattgacagctcaagataaacatggaatt	Protospacer
************************************

16. spacer 8.2|1740998|36|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT matches to KX228400 (Clostridium phage CDKM15, complete genome) position: , mismatch: 0, identity: 1.0

atgttcacattgacagctcaagataaacatggaatt	CRISPR spacer
atgttcacattgacagctcaagataaacatggaatt	Protospacer
************************************

17. spacer 8.4|1741129|37|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 0, identity: 1.0

gctgaaagtttaaaagttttaactataaattcagttg	CRISPR spacer
gctgaaagtttaaaagttttaactataaattcagttg	Protospacer
*************************************

18. spacer 9.1|1920136|38|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT matches to LN681539 (Clostridium phage phiCD505, complete genome) position: , mismatch: 0, identity: 1.0

ctagaattagaactcattattaaaaccattcttgcaag	CRISPR spacer
ctagaattagaactcattattaaaaccattcttgcaag	Protospacer
**************************************

19. spacer 9.1|1920136|38|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT matches to JX145341 (Clostridium phage phiMMP02, complete genome) position: , mismatch: 0, identity: 1.0

ctagaattagaactcattattaaaaccattcttgcaag	CRISPR spacer
ctagaattagaactcattattaaaaccattcttgcaag	Protospacer
**************************************

20. spacer 9.1|1920136|38|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT matches to NC_011398 (Clostridium phage phiCD27, complete genome) position: , mismatch: 0, identity: 1.0

ctagaattagaactcattattaaaaccattcttgcaag	CRISPR spacer
ctagaattagaactcattattaaaaccattcttgcaag	Protospacer
**************************************

21. spacer 9.1|1920136|38|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT matches to NC_048642 (Clostridium phage CDKM9, complete genome) position: , mismatch: 0, identity: 1.0

ctagaattagaactcattattaaaaccattcttgcaag	CRISPR spacer
ctagaattagaactcattattaaaaccattcttgcaag	Protospacer
**************************************

22. spacer 9.1|1920136|38|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT matches to KX228400 (Clostridium phage CDKM15, complete genome) position: , mismatch: 0, identity: 1.0

ctagaattagaactcattattaaaaccattcttgcaag	CRISPR spacer
ctagaattagaactcattattaaaaccattcttgcaag	Protospacer
**************************************

23. spacer 9.2|1920203|37|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT matches to GU949551 (Clostridium phage phiCD6356, complete genome) position: , mismatch: 0, identity: 1.0

taatctgacacatacaaagttgaacctagtggtacgg	CRISPR spacer
taatctgacacatacaaagttgaacctagtggtacgg	Protospacer
*************************************

24. spacer 9.4|1920335|36|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 0, identity: 1.0

tggtatatcatactcgtgcattgcctgctccacatt	CRISPR spacer
tggtatatcatactcgtgcattgcctgctccacatt	Protospacer
************************************

25. spacer 9.4|1920335|36|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 0, identity: 1.0

tggtatatcatactcgtgcattgcctgctccacatt	CRISPR spacer
tggtatatcatactcgtgcattgcctgctccacatt	Protospacer
************************************

26. spacer 9.4|1920335|36|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 0, identity: 1.0

tggtatatcatactcgtgcattgcctgctccacatt	CRISPR spacer
tggtatatcatactcgtgcattgcctgctccacatt	Protospacer
************************************

27. spacer 9.4|1920335|36|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 0, identity: 1.0

tggtatatcatactcgtgcattgcctgctccacatt	CRISPR spacer
tggtatatcatactcgtgcattgcctgctccacatt	Protospacer
************************************

28. spacer 9.6|1920466|36|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT matches to FN668942 (Clostridium difficile BI1 plasmid pCDBI1, complete sequence) position: , mismatch: 0, identity: 1.0

ttttttaacttttcagttctcacaggcgtttcatct	CRISPR spacer
ttttttaacttttcagttctcacaggcgtttcatct	Protospacer
************************************

29. spacer 9.15|1921055|37|NZ_CP010905|CRISPRCasFinder,CRT matches to NZ_MF547664 (Clostridioides difficile strain LIBA-6289 plasmid LIBA6289, complete sequence) position: , mismatch: 0, identity: 1.0

tcaatatctatattaagtttatttttaaaaacatctt	CRISPR spacer
tcaatatctatattaagtttatttttaaaaacatctt	Protospacer
*************************************

30. spacer 11.13|2648362|36|NZ_CP010905|CRISPRCasFinder,CRT,PILER-CR matches to NC_011398 (Clostridium phage phiCD27, complete genome) position: , mismatch: 0, identity: 1.0

ttgtagattttgtaagtaatggtttttcggaaaaag	CRISPR spacer
ttgtagattttgtaagtaatggtttttcggaaaaag	Protospacer
************************************

31. spacer 11.13|2648362|36|NZ_CP010905|CRISPRCasFinder,CRT,PILER-CR matches to KX228400 (Clostridium phage CDKM15, complete genome) position: , mismatch: 0, identity: 1.0

ttgtagattttgtaagtaatggtttttcggaaaaag	CRISPR spacer
ttgtagattttgtaagtaatggtttttcggaaaaag	Protospacer
************************************

32. spacer 11.14|2648427|37|NZ_CP010905|CRISPRCasFinder,CRT,PILER-CR matches to LN681539 (Clostridium phage phiCD505, complete genome) position: , mismatch: 0, identity: 1.0

aaaataagctatgaagctaaaggagaaatgaaaggag	CRISPR spacer
aaaataagctatgaagctaaaggagaaatgaaaggag	Protospacer
*************************************

33. spacer 11.14|2648427|37|NZ_CP010905|CRISPRCasFinder,CRT,PILER-CR matches to JX145341 (Clostridium phage phiMMP02, complete genome) position: , mismatch: 0, identity: 1.0

aaaataagctatgaagctaaaggagaaatgaaaggag	CRISPR spacer
aaaataagctatgaagctaaaggagaaatgaaaggag	Protospacer
*************************************

34. spacer 11.14|2648427|37|NZ_CP010905|CRISPRCasFinder,CRT,PILER-CR matches to NC_011398 (Clostridium phage phiCD27, complete genome) position: , mismatch: 0, identity: 1.0

aaaataagctatgaagctaaaggagaaatgaaaggag	CRISPR spacer
aaaataagctatgaagctaaaggagaaatgaaaggag	Protospacer
*************************************

35. spacer 11.14|2648427|37|NZ_CP010905|CRISPRCasFinder,CRT,PILER-CR matches to NC_048642 (Clostridium phage CDKM9, complete genome) position: , mismatch: 0, identity: 1.0

aaaataagctatgaagctaaaggagaaatgaaaggag	CRISPR spacer
aaaataagctatgaagctaaaggagaaatgaaaggag	Protospacer
*************************************

36. spacer 11.14|2648427|37|NZ_CP010905|CRISPRCasFinder,CRT,PILER-CR matches to KX228400 (Clostridium phage CDKM15, complete genome) position: , mismatch: 0, identity: 1.0

aaaataagctatgaagctaaaggagaaatgaaaggag	CRISPR spacer
aaaataagctatgaagctaaaggagaaatgaaaggag	Protospacer
*************************************

37. spacer 20.5|3382013|38|NZ_CP010905|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020426 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

gagaattatattgaacgattaggagatattgaagagtt	CRISPR spacer
gagaattatattgaacgattaggagatattgaagagtt	Protospacer
**************************************

38. spacer 20.5|3382013|38|NZ_CP010905|CRISPRCasFinder,CRT,PILER-CR matches to CP011970 (Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence) position: , mismatch: 0, identity: 1.0

gagaattatattgaacgattaggagatattgaagagtt	CRISPR spacer
gagaattatattgaacgattaggagatattgaagagtt	Protospacer
**************************************

39. spacer 20.5|3382013|38|NZ_CP010905|CRISPRCasFinder,CRT,PILER-CR matches to LN681537 (Clostridium phage phiCD211, complete genome) position: , mismatch: 0, identity: 1.0

gagaattatattgaacgattaggagatattgaagagtt	CRISPR spacer
gagaattatattgaacgattaggagatattgaagagtt	Protospacer
**************************************

40. spacer 21.8|3440497|37|NZ_CP010905|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020426 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

tattaaaaaattactacctttaagttgaccttttaaa	CRISPR spacer
tattaaaaaattactacctttaagttgaccttttaaa	Protospacer
*************************************

41. spacer 21.8|3440497|37|NZ_CP010905|CRISPRCasFinder,CRT,PILER-CR matches to CP011970 (Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence) position: , mismatch: 0, identity: 1.0

tattaaaaaattactacctttaagttgaccttttaaa	CRISPR spacer
tattaaaaaattactacctttaagttgaccttttaaa	Protospacer
*************************************

42. spacer 21.8|3440497|37|NZ_CP010905|CRISPRCasFinder,CRT,PILER-CR matches to LN681537 (Clostridium phage phiCD211, complete genome) position: , mismatch: 0, identity: 1.0

tattaaaaaattactacctttaagttgaccttttaaa	CRISPR spacer
tattaaaaaattactacctttaagttgaccttttaaa	Protospacer
*************************************

43. spacer 21.9|3440563|36|NZ_CP010905|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020426 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

aaatattagatagaatagggataaatgaagaatatg	CRISPR spacer
aaatattagatagaatagggataaatgaagaatatg	Protospacer
************************************

44. spacer 21.9|3440563|36|NZ_CP010905|CRISPRCasFinder,CRT,PILER-CR matches to CP011970 (Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence) position: , mismatch: 0, identity: 1.0

aaatattagatagaatagggataaatgaagaatatg	CRISPR spacer
aaatattagatagaatagggataaatgaagaatatg	Protospacer
************************************

45. spacer 21.9|3440563|36|NZ_CP010905|CRISPRCasFinder,CRT,PILER-CR matches to LN681537 (Clostridium phage phiCD211, complete genome) position: , mismatch: 0, identity: 1.0

aaatattagatagaatagggataaatgaagaatatg	CRISPR spacer
aaatattagatagaatagggataaatgaagaatatg	Protospacer
************************************

46. spacer 21.18|3441155|37|NZ_CP010905|CRISPRCasFinder,CRT,PILER-CR matches to GU949551 (Clostridium phage phiCD6356, complete genome) position: , mismatch: 0, identity: 1.0

gttattcagatgcatataaaaacgcaggtcaaacctt	CRISPR spacer
gttattcagatgcatataaaaacgcaggtcaaacctt	Protospacer
*************************************

47. spacer 21.19|3441221|37|NZ_CP010905|CRISPRCasFinder,CRT,PILER-CR matches to LN681539 (Clostridium phage phiCD505, complete genome) position: , mismatch: 0, identity: 1.0

aaattgaagtaataaagaaaataagctatgaagctaa	CRISPR spacer
aaattgaagtaataaagaaaataagctatgaagctaa	Protospacer
*************************************

48. spacer 21.19|3441221|37|NZ_CP010905|CRISPRCasFinder,CRT,PILER-CR matches to JX145341 (Clostridium phage phiMMP02, complete genome) position: , mismatch: 0, identity: 1.0

aaattgaagtaataaagaaaataagctatgaagctaa	CRISPR spacer
aaattgaagtaataaagaaaataagctatgaagctaa	Protospacer
*************************************

49. spacer 21.19|3441221|37|NZ_CP010905|CRISPRCasFinder,CRT,PILER-CR matches to NC_011398 (Clostridium phage phiCD27, complete genome) position: , mismatch: 0, identity: 1.0

aaattgaagtaataaagaaaataagctatgaagctaa	CRISPR spacer
aaattgaagtaataaagaaaataagctatgaagctaa	Protospacer
*************************************

50. spacer 21.19|3441221|37|NZ_CP010905|CRISPRCasFinder,CRT,PILER-CR matches to NC_048642 (Clostridium phage CDKM9, complete genome) position: , mismatch: 0, identity: 1.0

aaattgaagtaataaagaaaataagctatgaagctaa	CRISPR spacer
aaattgaagtaataaagaaaataagctatgaagctaa	Protospacer
*************************************

51. spacer 21.19|3441221|37|NZ_CP010905|CRISPRCasFinder,CRT,PILER-CR matches to KX228400 (Clostridium phage CDKM15, complete genome) position: , mismatch: 0, identity: 1.0

aaattgaagtaataaagaaaataagctatgaagctaa	CRISPR spacer
aaattgaagtaataaagaaaataagctatgaagctaa	Protospacer
*************************************

52. spacer 2.1|148748|34|NZ_CP010905|CRISPRCasFinder matches to NZ_CP033215 (Clostridioides difficile strain 12038 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.971

aaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
aaactgaacacatgtgaagtttgtttgttggcgc	Protospacer
*********.************************

53. spacer 4.3|1110378|37|NZ_CP010905|CRISPRCasFinder matches to LN681542 (Clostridium phage phiMMP03, complete genome) position: , mismatch: 1, identity: 0.973

agtacatacaaagagtctataaaattatctataaagg	CRISPR spacer
agtacatacaaagagtttataaaattatctataaagg	Protospacer
****************.********************

54. spacer 4.3|1110378|37|NZ_CP010905|CRISPRCasFinder matches to HG531805 (Clostridium phage CDMH1 complete genome) position: , mismatch: 1, identity: 0.973

agtacatacaaagagtctataaaattatctataaagg	CRISPR spacer
agtacatacaaagagtttataaaattatctataaagg	Protospacer
****************.********************

55. spacer 4.3|1110378|37|NZ_CP010905|CRISPRCasFinder matches to NC_009231 (Clostridium phage phiC2, complete genome) position: , mismatch: 1, identity: 0.973

agtacatacaaagagtctataaaattatctataaagg	CRISPR spacer
agtacatacaaagagtttataaaattatctataaagg	Protospacer
****************.********************

56. spacer 4.3|1110378|37|NZ_CP010905|CRISPRCasFinder matches to LN681541 (Clostridium phage phiMMP01, complete genome) position: , mismatch: 1, identity: 0.973

agtacatacaaagagtctataaaattatctataaagg	CRISPR spacer
agtacatacaaagagtttataaaattatctataaagg	Protospacer
****************.********************

57. spacer 6.8|1419872|36|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT matches to NC_048665 (Clostridium phage phiCDHM14, complete genome) position: , mismatch: 1, identity: 0.972

ataagagtggtttaagaaaataagttatttttcaaa	CRISPR spacer
ctaagagtggtttaagaaaataagttatttttcaaa	Protospacer
 ***********************************

58. spacer 6.8|1419872|36|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT matches to HG796225 (Clostridium phage phiCDHM13 complete genome) position: , mismatch: 1, identity: 0.972

ataagagtggtttaagaaaataagttatttttcaaa	CRISPR spacer
ctaagagtggtttaagaaaataagttatttttcaaa	Protospacer
 ***********************************

59. spacer 6.8|1419872|36|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT matches to LN681538 (Clostridium phage phiCD481-1, complete genome) position: , mismatch: 1, identity: 0.972

ataagagtggtttaagaaaataagttatttttcaaa	CRISPR spacer
ctaagagtggtttaagaaaataagttatttttcaaa	Protospacer
 ***********************************

60. spacer 6.8|1419872|36|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT matches to HG798901 (Clostridium phage phiCDHM11 complete genome) position: , mismatch: 1, identity: 0.972

ataagagtggtttaagaaaataagttatttttcaaa	CRISPR spacer
ctaagagtggtttaagaaaataagttatttttcaaa	Protospacer
 ***********************************

61. spacer 6.8|1419872|36|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT matches to MK473382 (Clostridium phage JD032, complete genome) position: , mismatch: 1, identity: 0.972

ataagagtggtttaagaaaataagttatttttcaaa	CRISPR spacer
ataagagtggttaaagaaaataagttatttttcaaa	Protospacer
************ ***********************

62. spacer 6.8|1419872|36|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT matches to NC_028838 (Clostridium phage phiCD506, complete genome) position: , mismatch: 1, identity: 0.972

ataagagtggtttaagaaaataagttatttttcaaa	CRISPR spacer
ataagagtggttaaagaaaataagttatttttcaaa	Protospacer
************ ***********************

63. spacer 8.4|1741129|37|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 1, identity: 0.973

gctgaaagtttaaaagttttaactataaattcagttg	CRISPR spacer
gctgaaagtttaaaagttttaactataaattcagtgg	Protospacer
*********************************** *

64. spacer 8.8|1741391|39|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT matches to LN681539 (Clostridium phage phiCD505, complete genome) position: , mismatch: 1, identity: 0.974

ctcaaagttggactagcttcatcttttaattttacaagt	CRISPR spacer
ctcaaagttggactagcttcatcttttaattttacaatt	Protospacer
************************************* *

65. spacer 8.8|1741391|39|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT matches to NC_048642 (Clostridium phage CDKM9, complete genome) position: , mismatch: 1, identity: 0.974

ctcaaagttggactagcttcatcttttaattttacaagt	CRISPR spacer
ctcaaagttggactagcttcatcttttaattttacaatt	Protospacer
************************************* *

66. spacer 8.8|1741391|39|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT matches to KX228400 (Clostridium phage CDKM15, complete genome) position: , mismatch: 1, identity: 0.974

ctcaaagttggactagcttcatcttttaattttacaagt	CRISPR spacer
ctcaaagttggactagcttcatcttttaattttacaatt	Protospacer
************************************* *

67. spacer 9.4|1920335|36|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT matches to NC_028905 (Clostridium phage phiCD111, complete genome) position: , mismatch: 1, identity: 0.972

tggtatatcatactcgtgcattgcctgctccacatt	CRISPR spacer
tggtatatcatactcgtgcattgcctgctctacatt	Protospacer
******************************.*****

68. spacer 9.6|1920466|36|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT matches to KX905163 (Clostridioides phage phiSemix9P1, complete genome) position: , mismatch: 1, identity: 0.972

ttttttaacttttcagttctcacaggcgtttcatct	CRISPR spacer
ttttttaacttttcagttctcacaggtgtttcatct	Protospacer
**************************.*********

69. spacer 19.1|3381378|37|NZ_CP010905|CRISPRCasFinder matches to LN681542 (Clostridium phage phiMMP03, complete genome) position: , mismatch: 1, identity: 0.973

cctttatagataattttatagactctttgtatgtact	CRISPR spacer
cctttatagataattttataaactctttgtatgtact	Protospacer
********************.****************

70. spacer 19.1|3381378|37|NZ_CP010905|CRISPRCasFinder matches to HG531805 (Clostridium phage CDMH1 complete genome) position: , mismatch: 1, identity: 0.973

cctttatagataattttatagactctttgtatgtact	CRISPR spacer
cctttatagataattttataaactctttgtatgtact	Protospacer
********************.****************

71. spacer 19.1|3381378|37|NZ_CP010905|CRISPRCasFinder matches to NC_009231 (Clostridium phage phiC2, complete genome) position: , mismatch: 1, identity: 0.973

cctttatagataattttatagactctttgtatgtact	CRISPR spacer
cctttatagataattttataaactctttgtatgtact	Protospacer
********************.****************

72. spacer 19.1|3381378|37|NZ_CP010905|CRISPRCasFinder matches to LN681541 (Clostridium phage phiMMP01, complete genome) position: , mismatch: 1, identity: 0.973

cctttatagataattttatagactctttgtatgtact	CRISPR spacer
cctttatagataattttataaactctttgtatgtact	Protospacer
********************.****************

73. spacer 21.5|3440300|36|NZ_CP010905|CRISPRCasFinder,CRT,PILER-CR matches to NC_028996 (Clostridium phage phiCDHM19, complete genome) position: , mismatch: 1, identity: 0.972

aagaaagagctattgaagcattaaacagaatacagg	CRISPR spacer
aagaaagagctattgaagtattaaacagaatacagg	Protospacer
******************.*****************

74. spacer 21.5|3440300|36|NZ_CP010905|CRISPRCasFinder,CRT,PILER-CR matches to LN681541 (Clostridium phage phiMMP01, complete genome) position: , mismatch: 1, identity: 0.972

aagaaagagctattgaagcattaaacagaatacagg	CRISPR spacer
aagaaagagctattgaagtattaaacagaatacagg	Protospacer
******************.*****************

75. spacer 21.5|3440300|36|NZ_CP010905|CRISPRCasFinder,CRT,PILER-CR matches to NC_011398 (Clostridium phage phiCD27, complete genome) position: , mismatch: 1, identity: 0.972

aagaaagagctattgaagcattaaacagaatacagg	CRISPR spacer
aagaaagagctattgaagtattaaacagaatacagg	Protospacer
******************.*****************

76. spacer 21.5|3440300|36|NZ_CP010905|CRISPRCasFinder,CRT,PILER-CR matches to NC_048642 (Clostridium phage CDKM9, complete genome) position: , mismatch: 1, identity: 0.972

aagaaagagctattgaagcattaaacagaatacagg	CRISPR spacer
aagaaagagctattgaagtattaaacagaatacagg	Protospacer
******************.*****************

77. spacer 21.7|3440431|37|NZ_CP010905|CRISPRCasFinder,CRT,PILER-CR matches to MF547662 (Clostridioides phage LIBA6276, complete genome) position: , mismatch: 1, identity: 0.973

atttatataagtatgcaggtgaggggattttttgata	CRISPR spacer
atttatataagtatgcaggtgaggggattttttgaaa	Protospacer
*********************************** *

78. spacer 21.8|3440497|37|NZ_CP010905|CRISPRCasFinder,CRT,PILER-CR matches to MF547662 (Clostridioides phage LIBA6276, complete genome) position: , mismatch: 1, identity: 0.973

tattaaaaaattactacctttaagttgaccttttaaa	CRISPR spacer
tattaaaaaattactacctttaagttgaccttttaat	Protospacer
************************************ 

79. spacer 21.8|3440497|37|NZ_CP010905|CRISPRCasFinder,CRT,PILER-CR matches to MF547663 (Clostridioides phage LIBA2945, complete genome) position: , mismatch: 1, identity: 0.973

tattaaaaaattactacctttaagttgaccttttaaa	CRISPR spacer
tattaaaaaattactacctttaagttgaccttttaat	Protospacer
************************************ 

80. spacer 4.2|1110312|37|NZ_CP010905|CRISPRCasFinder matches to JX145341 (Clostridium phage phiMMP02, complete genome) position: , mismatch: 2, identity: 0.946

gttgcatcattaaatattttccctacaaactcttttc	CRISPR spacer
gttgcatcattaaatatcttacctacaaactcttttc	Protospacer
*****************.** ****************

81. spacer 4.2|1110312|37|NZ_CP010905|CRISPRCasFinder matches to NC_011398 (Clostridium phage phiCD27, complete genome) position: , mismatch: 2, identity: 0.946

gttgcatcattaaatattttccctacaaactcttttc	CRISPR spacer
gttgcatcattaaatatcttacctacaaactcttttc	Protospacer
*****************.** ****************

82. spacer 6.13|1420199|36|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT matches to NC_028996 (Clostridium phage phiCDHM19, complete genome) position: , mismatch: 2, identity: 0.944

aacaaaaaagatacatctgtaactaatttttatact	CRISPR spacer
agtaaaaaagatacatctgtaactaatttttatact	Protospacer
*..*********************************

83. spacer 8.2|1740998|36|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT matches to LN681539 (Clostridium phage phiCD505, complete genome) position: , mismatch: 2, identity: 0.944

atgttcacattgacagctcaagataaacatggaatt	CRISPR spacer
atgttcacactaacagctcaagataaacatggaatt	Protospacer
*********.*.************************

84. spacer 8.2|1740998|36|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT matches to NC_009231 (Clostridium phage phiC2, complete genome) position: , mismatch: 2, identity: 0.944

atgttcacattgacagctcaagataaacatggaatt	CRISPR spacer
atgttcacactaacagctcaagataaacatggaatt	Protospacer
*********.*.************************

85. spacer 8.7|1741325|37|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT matches to MF547662 (Clostridioides phage LIBA6276, complete genome) position: , mismatch: 2, identity: 0.946

aggagataacttctattaaagataactttgatgtggt	CRISPR spacer
aggaaatgacttctattaaagataactttgatgtggt	Protospacer
****.**.*****************************

86. spacer 8.7|1741325|37|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT matches to MF547663 (Clostridioides phage LIBA2945, complete genome) position: , mismatch: 2, identity: 0.946

aggagataacttctattaaagataactttgatgtggt	CRISPR spacer
aggaaatgacttctattaaagataactttgatgtggt	Protospacer
****.**.*****************************

87. spacer 9.3|1920269|37|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT matches to MK473382 (Clostridium phage JD032, complete genome) position: , mismatch: 2, identity: 0.946

aaaagcgttcttaaatcgttacttaactcttgcaaat	CRISPR spacer
aaaattgttcttaaatcgttacttaactcttgcaaat	Protospacer
**** .*******************************

88. spacer 9.11|1920794|35|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 2, identity: 0.943

tgaactttaatcggttttatacaacaatataacgc	CRISPR spacer
tgaactttaaccggttttatgcaacaatataacgc	Protospacer
**********.*********.**************

89. spacer 9.11|1920794|35|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 2, identity: 0.943

tgaactttaatcggttttatacaacaatataacgc	CRISPR spacer
tgaactttaaccggttttatgcaacaatataacgc	Protospacer
**********.*********.**************

90. spacer 9.11|1920794|35|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 2, identity: 0.943

tgaactttaatcggttttatacaacaatataacgc	CRISPR spacer
tgaactttaaccggttttatgcaacaatataacgc	Protospacer
**********.*********.**************

91. spacer 9.11|1920794|35|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 2, identity: 0.943

tgaactttaatcggttttatacaacaatataacgc	CRISPR spacer
tgaactttaaccggttttatgcaacaatataacgc	Protospacer
**********.*********.**************

92. spacer 10.1|2283264|36|NZ_CP010905|PILER-CR matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 2, identity: 0.944

taagactagcagactcataagcaattagttgcctct	CRISPR spacer
taagaccagcagactcataagcaattagttgtctct	Protospacer
******.************************.****

93. spacer 10.1|2283264|36|NZ_CP010905|PILER-CR matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 2, identity: 0.944

taagactagcagactcataagcaattagttgcctct	CRISPR spacer
taagaccagcagactcataagcaattagttgtctct	Protospacer
******.************************.****

94. spacer 10.1|2283264|36|NZ_CP010905|PILER-CR matches to LN680008 (Clostridium phage phiCDHS1 gp04 gene for putative capsid protein) position: , mismatch: 2, identity: 0.944

taagactagcagactcataagcaattagttgcctct	CRISPR spacer
taagaccagcagactcataagcaattagttgtctct	Protospacer
******.************************.****

95. spacer 10.1|2283264|36|NZ_CP010905|PILER-CR matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 2, identity: 0.944

taagactagcagactcataagcaattagttgcctct	CRISPR spacer
taagaccagcagactcataagcaattagttgtctct	Protospacer
******.************************.****

96. spacer 11.1|2647570|36|NZ_CP010905|CRISPRCasFinder,CRT matches to NZ_MG973074 (Clostridioides difficile strain HSJD-312 plasmid pHSJD-312, complete sequence) position: , mismatch: 2, identity: 0.944

acaattattaattgttttattagtgaaatcacagca	CRISPR spacer
acaattattaattgttttattaataaaatcacagca	Protospacer
**********************.*.***********

97. spacer 19.2|3381444|37|NZ_CP010905|CRISPRCasFinder matches to JX145341 (Clostridium phage phiMMP02, complete genome) position: , mismatch: 2, identity: 0.946

gaaaagagtttgtagggaaaatatttaatgatgcaac	CRISPR spacer
gaaaagagtttgtaggtaagatatttaatgatgcaac	Protospacer
**************** **.*****************

98. spacer 19.2|3381444|37|NZ_CP010905|CRISPRCasFinder matches to NC_011398 (Clostridium phage phiCD27, complete genome) position: , mismatch: 2, identity: 0.946

gaaaagagtttgtagggaaaatatttaatgatgcaac	CRISPR spacer
gaaaagagtttgtaggtaagatatttaatgatgcaac	Protospacer
**************** **.*****************

99. spacer 22.1|4134782|38|NZ_CP010905|CRISPRCasFinder matches to NZ_CP033215 (Clostridioides difficile strain 12038 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.947

aaacaaacttcacatgcgttcagtttattctgttgcta	CRISPR spacer
aaacaaacttcacatgtgttcagtttattctgttgctt	Protospacer
****************.******************** 

100. spacer 4.5|1110314|38|NZ_CP010905|PILER-CR matches to JX145341 (Clostridium phage phiMMP02, complete genome) position: , mismatch: 3, identity: 0.921

gttgcatcattaaatattttccctacaaactcttttca	CRISPR spacer
gttgcatcattaaatatcttacctacaaactcttttct	Protospacer
*****************.** **************** 

101. spacer 4.5|1110314|38|NZ_CP010905|PILER-CR matches to NC_011398 (Clostridium phage phiCD27, complete genome) position: , mismatch: 3, identity: 0.921

gttgcatcattaaatattttccctacaaactcttttca	CRISPR spacer
gttgcatcattaaatatcttacctacaaactcttttct	Protospacer
*****************.** **************** 

102. spacer 6.8|1419872|36|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT matches to NC_028905 (Clostridium phage phiCD111, complete genome) position: , mismatch: 3, identity: 0.917

ataagagtggtttaagaaaataagttatttttcaaa	CRISPR spacer
ataagagtggtttaagaaaataagttatttttaatc	Protospacer
******************************** *  

103. spacer 6.13|1420199|36|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT matches to AY855346 (Clostridium difficile bacteriophage phi CD119, complete genome) position: , mismatch: 3, identity: 0.917

aacaaaaaagatacatctgtaactaatttttatact	CRISPR spacer
agtaaaaaagatacatctgtaactattttttatact	Protospacer
*..********************** **********

104. spacer 6.13|1420199|36|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT matches to NC_007917 (Clostridium phage phi CD119, complete genome) position: , mismatch: 3, identity: 0.917

aacaaaaaagatacatctgtaactaatttttatact	CRISPR spacer
agtaaaaaagatacatctgtaactattttttatact	Protospacer
*..********************** **********

105. spacer 8.8|1741391|39|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT matches to NC_011398 (Clostridium phage phiCD27, complete genome) position: , mismatch: 3, identity: 0.923

ctcaaagttggactagcttcatcttttaattttacaagt	CRISPR spacer
ctcaatgttggactagcttcatcttttagttttacaatt	Protospacer
***** **********************.******** *

106. spacer 19.4|3381387|39|NZ_CP010905|PILER-CR matches to LN681542 (Clostridium phage phiMMP03, complete genome) position: , mismatch: 3, identity: 0.923

ccctttatagataattttatagactctttgtatgtacta	CRISPR spacer
acctttatagataattttataaactctttgtatgtactt	Protospacer
 ********************.**************** 

107. spacer 19.4|3381387|39|NZ_CP010905|PILER-CR matches to HG531805 (Clostridium phage CDMH1 complete genome) position: , mismatch: 3, identity: 0.923

ccctttatagataattttatagactctttgtatgtacta	CRISPR spacer
acctttatagataattttataaactctttgtatgtactt	Protospacer
 ********************.**************** 

108. spacer 19.4|3381387|39|NZ_CP010905|PILER-CR matches to NC_009231 (Clostridium phage phiC2, complete genome) position: , mismatch: 3, identity: 0.923

ccctttatagataattttatagactctttgtatgtacta	CRISPR spacer
acctttatagataattttataaactctttgtatgtactt	Protospacer
 ********************.**************** 

109. spacer 19.4|3381387|39|NZ_CP010905|PILER-CR matches to LN681541 (Clostridium phage phiMMP01, complete genome) position: , mismatch: 3, identity: 0.923

ccctttatagataattttatagactctttgtatgtacta	CRISPR spacer
acctttatagataattttataaactctttgtatgtactt	Protospacer
 ********************.**************** 

110. spacer 19.5|3381455|38|NZ_CP010905|PILER-CR matches to JX145341 (Clostridium phage phiMMP02, complete genome) position: , mismatch: 3, identity: 0.921

gaaaagagtttgtagggaaaatatttaatgatgcaacc	CRISPR spacer
gaaaagagtttgtaggtaagatatttaatgatgcaaca	Protospacer
**************** **.***************** 

111. spacer 19.5|3381455|38|NZ_CP010905|PILER-CR matches to NC_011398 (Clostridium phage phiCD27, complete genome) position: , mismatch: 3, identity: 0.921

gaaaagagtttgtagggaaaatatttaatgatgcaacc	CRISPR spacer
gaaaagagtttgtaggtaagatatttaatgatgcaaca	Protospacer
**************** **.***************** 

112. spacer 18.3|3288646|25|NZ_CP010905|CRISPRCasFinder matches to MN694568 (Marine virus AFVG_250M879, complete genome) position: , mismatch: 4, identity: 0.84

tactattggttcatctgtatttggt	CRISPR spacer
tcaatttggttcatctgtatttggt	Protospacer
*    ********************

113. spacer 18.3|3288646|25|NZ_CP010905|CRISPRCasFinder matches to HQ634174 (Cyanophage MED4-213, complete genome) position: , mismatch: 4, identity: 0.84

tactattggttcatctgtatttggt	CRISPR spacer
tgctattggtgcatctgtatttgaa	Protospacer
*.******** ************. 

114. spacer 18.3|3288646|25|NZ_CP010905|CRISPRCasFinder matches to GU071101 (Prochlorococcus phage P-HM1, complete genome) position: , mismatch: 4, identity: 0.84

tactattggttcatctgtatttggt	CRISPR spacer
tgctattggtgcatctgtatttgaa	Protospacer
*.******** ************. 

115. spacer 9.3|1920269|37|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT matches to NC_028838 (Clostridium phage phiCD506, complete genome) position: , mismatch: 5, identity: 0.865

aaaagcgttcttaaatcgttacttaactcttgcaaat	CRISPR spacer
agaattgttcttaaatcgtcacttaactcttgtaaat	Protospacer
*.** .*************.************.****

116. spacer 1.1|146733|29|NZ_CP010905|CRISPRCasFinder matches to KY971610 (Pseudomonas phage PspYZU05, complete genome) position: , mismatch: 6, identity: 0.793

tgtaataagttaaagcaatatgaatcaac	CRISPR spacer
tacgataagttacagcaatacgaatcatc	Protospacer
*...******** *******.****** *

117. spacer 7.6|1630181|38|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016840 (Brochothrix thermosphacta strain TMW 2.1564 plasmid pL21564-1, complete sequence) position: , mismatch: 6, identity: 0.842

ctatcaatatatattttataagcataagttttacgcat-	CRISPR spacer
atatcattatctattttataagcataagtttt-caaata	Protospacer
 ***** *** ********************* *. ** 

118. spacer 10.2|2283336|30|NZ_CP010905|PILER-CR matches to MN694267 (Marine virus AFVG_250M705, complete genome) position: , mismatch: 6, identity: 0.8

tagaggctctcagagaagttataagatgtt	CRISPR spacer
caaaggctcttagagaagttttaagagctt	Protospacer
.*.*******.********* *****  **

119. spacer 11.11|2648228|38|NZ_CP010905|CRISPRCasFinder,CRT,PILER-CR matches to AY855346 (Clostridium difficile bacteriophage phi CD119, complete genome) position: , mismatch: 6, identity: 0.842

tttatatcagtctttttagtcgctgtctgaatctcctc	CRISPR spacer
tttatgtcagtctttttagtcgctgtctgtgccacttc	Protospacer
*****.*********************** ..* *.**

120. spacer 11.11|2648228|38|NZ_CP010905|CRISPRCasFinder,CRT,PILER-CR matches to NC_007917 (Clostridium phage phi CD119, complete genome) position: , mismatch: 6, identity: 0.842

tttatatcagtctttttagtcgctgtctgaatctcctc	CRISPR spacer
tttatgtcagtctttttagtcgctgtctgtgccacttc	Protospacer
*****.*********************** ..* *.**

121. spacer 11.11|2648228|38|NZ_CP010905|CRISPRCasFinder,CRT,PILER-CR matches to NC_028996 (Clostridium phage phiCDHM19, complete genome) position: , mismatch: 6, identity: 0.842

tttatatcagtctttttagtcgctgtctgaatctcctc	CRISPR spacer
tttatgtcagtctttttagtcgctgtctgtgccacttc	Protospacer
*****.*********************** ..* *.**

122. spacer 18.1|3288511|31|NZ_CP010905|CRISPRCasFinder matches to MG869618 (Polaromonas sp. E5S plasmid pE5SP1, complete sequence) position: , mismatch: 7, identity: 0.774

caatacctctggtattggcggatttattata	CRISPR spacer
cagcacctctggtactggctgatttatcttt	Protospacer
**..**********.**** *******. * 

123. spacer 9.13|1920924|36|NZ_CP010905|CRISPRCasFinder,CRT matches to NZ_LR134399 (Listeria monocytogenes strain NCTC7974 plasmid 2, complete sequence) position: , mismatch: 8, identity: 0.778

ttcgtaaaataacaattatctggaatatg--agaagtt	CRISPR spacer
tcagtaaaataactattatcaggaatatgctggaaa--	Protospacer
*. ********** ****** ********  .***.  

124. spacer 9.15|1921055|37|NZ_CP010905|CRISPRCasFinder,CRT matches to NZ_CP017256 (Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence) position: , mismatch: 8, identity: 0.784

tcaatatctatattaagtttatttttaaaaacatctt-----	CRISPR spacer
tcaatatttatattaactttattttta-----gtcttcattt	Protospacer
*******.******** **********     .****     

125. spacer 18.1|3288511|31|NZ_CP010905|CRISPRCasFinder matches to LR606148 (Rhizobium sp. Q54 genome assembly, plasmid: 5) position: , mismatch: 8, identity: 0.742

caatacctctggtattggcggatttattata	CRISPR spacer
cgagcaacttggtattggcggatttatgata	Protospacer
*.*    ..****************** ***

126. spacer 7.3|1629980|37|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KY940428 (UNVERIFIED: Bacillus sp. (in: Bacteria) strain PUMK-07 plasmid pMK-07, complete sequence) position: , mismatch: 9, identity: 0.757

ggagatttaaaagttaacaacataaaaatgatagata	CRISPR spacer
tatgatttaaatgttaaaaacataaaaatattataaa	Protospacer
 . ******** ***** ***********. ** * *

127. spacer 7.3|1629980|37|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP047087 (Bacillus paranthracis strain BC307 plasmid pCE2, complete sequence) position: , mismatch: 9, identity: 0.757

ggagatttaaaagttaacaacataaaaatgatagata	CRISPR spacer
tatgatttaaatgttaaaaacataaaaatattataaa	Protospacer
 . ******** ***** ***********. ** * *

128. spacer 7.3|1629980|37|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041978 (Bacillus pacificus strain NCCP 15909 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.757

ggagatttaaaagttaacaacataaaaatgatagata	CRISPR spacer
tatgatttaaatgttaaaaacataaaaatattataaa	Protospacer
 . ******** ***** ***********. ** * *

129. spacer 7.3|1629980|37|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT matches to CP041980 (Bacillus paranthracis strain NCCP 15910 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.757

ggagatttaaaagttaacaacataaaaatgatagata	CRISPR spacer
tatgatttaaatgttaaaaacataaaaatattataaa	Protospacer
 . ******** ***** ***********. ** * *

130. spacer 7.3|1629980|37|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT matches to CP041752 (Bacillus paranthracis strain NCCP 14796 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.757

ggagatttaaaagttaacaacataaaaatgatagata	CRISPR spacer
tatgatttaaatgttaaaaacataaaaatattataaa	Protospacer
 . ******** ***** ***********. ** * *

131. spacer 7.3|1629980|37|NZ_CP010905|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040343 (Bacillus cereus strain DLOU-Weihai plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.757

ggagatttaaaagttaacaacataaaaatgatagata	CRISPR spacer
tatgatttaaatgttaaaaacataaaaatattataaa	Protospacer
 . ******** ***** ***********. ** * *

132. spacer 9.15|1921055|37|NZ_CP010905|CRISPRCasFinder,CRT matches to NZ_CP047434 (Spiroplasma citri strain BLH-13 plasmid pSciBLH13-6) position: , mismatch: 9, identity: 0.757

tcaatatctatattaagtttatttttaa---aaacatctt	CRISPR spacer
tttatatctttattaattttatttttaaattaaataa---	Protospacer
*. ****** ****** ***********   ***.*    

133. spacer 18.1|3288511|31|NZ_CP010905|CRISPRCasFinder matches to NZ_MK748464 (Candidatus Endohaliclona renieramycinifaciens plasmid p-ren_Ren-PNG-07060 clone Ren-PNG-07060, complete sequence) position: , mismatch: 9, identity: 0.71

caatacctctggtattggcggatttattata	CRISPR spacer
tgcagcctctgatattggcgtatttattact	Protospacer
..  .******.******** ********. 

134. spacer 18.1|3288511|31|NZ_CP010905|CRISPRCasFinder matches to NZ_MK748465 (Candidatus Endohaliclona renieramycinifaciens plasmid p-ren_Ren-PNG-07113 clone Ren-PNG-07113, complete sequence) position: , mismatch: 9, identity: 0.71

caatacctctggtattggcggatttattata	CRISPR spacer
tgcagcctctgatattggcgtatttattact	Protospacer
..  .******.******** ********. 

135. spacer 18.1|3288511|31|NZ_CP010905|CRISPRCasFinder matches to NZ_MK748462 (Candidatus Endohaliclona renieramycinifaciens plasmid p-ren_Ren-Bali-16-03 clone Ren-Bali-16-03, complete sequence) position: , mismatch: 9, identity: 0.71

caatacctctggtattggcggatttattata	CRISPR spacer
tgcagcctctgatattggcgtatttattact	Protospacer
..  .******.******** ********. 

136. spacer 18.1|3288511|31|NZ_CP010905|CRISPRCasFinder matches to NZ_MK748463 (Candidatus Endohaliclona renieramycinifaciens plasmid p-ren_Ren-Pal-02 clone Ren-Pal-02, complete sequence) position: , mismatch: 9, identity: 0.71

caatacctctggtattggcggatttattata	CRISPR spacer
tgcagcctctgatattggcgtatttattact	Protospacer
..  .******.******** ********. 

137. spacer 9.15|1921055|37|NZ_CP010905|CRISPRCasFinder,CRT matches to NZ_CP035115 (Lactobacillus plantarum strain SRCM103295 plasmid unnamed2) position: , mismatch: 10, identity: 0.73

tcaatatctatattaagtttatttttaaaaacatctt	CRISPR spacer
ttacaaaatagattaagtttattttaaaaaacattcc	Protospacer
*.*  *  ** ************** ********...

138. spacer 9.15|1921055|37|NZ_CP010905|CRISPRCasFinder,CRT matches to NZ_CP035567 (Lactobacillus plantarum strain SRCM103300 plasmid unnamed1) position: , mismatch: 10, identity: 0.73

tcaatatctatattaagtttatttttaaaaacatctt	CRISPR spacer
ttacaaaatagattaagtttattttaaaaaacattcc	Protospacer
*.*  *  ** ************** ********...

139. spacer 11.1|2647570|36|NZ_CP010905|CRISPRCasFinder,CRT matches to NZ_CP045274 (Bacillus megaterium strain FDU301 plasmid pFDU301B, complete sequence) position: , mismatch: 10, identity: 0.722

acaattattaattgttttattagtgaaatcacagca	CRISPR spacer
tgaattcttaattgttttattagagaaatacctttt	Protospacer
  **** **************** *****  *  . 

140. spacer 11.13|2648362|36|NZ_CP010905|CRISPRCasFinder,CRT,PILER-CR matches to AP014113 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C35-MedDCM-OCT-S46-C200, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 10, identity: 0.722

ttgtagattttgtaagtaatggtttttcggaaaaag	CRISPR spacer
ttgtagattttttaagtaatggttttaaaattagga	Protospacer
*********** **************  ..  *...

141. spacer 14.1|3124128|34|NZ_CP010905|CRISPRCasFinder matches to MN856057 (Bacteriophage sp. isolate 161, complete genome) position: , mismatch: 10, identity: 0.706

tagcatctttccatatttgtctaaatagtaagac	CRISPR spacer
agacttcttaccatatttgtctacatagtcattt	Protospacer
 ..* **** ************* ***** *  .

142. spacer 14.1|3124128|34|NZ_CP010905|CRISPRCasFinder matches to MN855979 (Bacteriophage sp. isolate 144, complete genome) position: , mismatch: 10, identity: 0.706

tagcatctttccatatttgtctaaatagtaagac	CRISPR spacer
agacttcttaccatatttgtctacatagtcattt	Protospacer
 ..* **** ************* ***** *  .

143. spacer 3.5|1109941|37|NZ_CP010905|CRISPRCasFinder,CRT matches to LC557520 (Staphylococcus phage vB_SsapH-Golestan101-M DNA, complete genome) position: , mismatch: 11, identity: 0.703

ttcgcaacttatgatggtgaaatgattacattaacag	CRISPR spacer
attaagacttttgatggagaaatgattacatttgatg	Protospacer
 *.. .**** ****** ************** .  *

144. spacer 11.10|2648162|37|NZ_CP010905|CRISPRCasFinder,CRT,PILER-CR matches to NC_018878 (Bacillus thuringiensis Bt407 plasmid BTB_502p, complete sequence) position: , mismatch: 11, identity: 0.703

gttcatcagatggatatgcaaatggagatataaagtt	CRISPR spacer
caatagaagatggttatgcaaatggagatatgaaaaa	Protospacer
   .*  ****** *****************.**.  

145. spacer 14.1|3124128|34|NZ_CP010905|CRISPRCasFinder matches to NZ_CP022366 (Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence) position: , mismatch: 11, identity: 0.676

tagcatctttccatatttgtctaaatagtaagac	CRISPR spacer
cctcatatttccatatttgtcaaaatatggaaga	Protospacer
.  *** ************** *****  .*.. 

146. spacer 20.2|3381815|37|NZ_CP010905|CRISPRCasFinder,CRT matches to LC557520 (Staphylococcus phage vB_SsapH-Golestan101-M DNA, complete genome) position: , mismatch: 11, identity: 0.703

ctgttaatgtaatcatttcaccatcataagttgcgaa	CRISPR spacer
catcaaatgtaatcatttctccatcaaaagtcttaat	Protospacer
*  . ************** ****** ****. ..* 

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 284242 : 292759 9 Synechococcus_phage(33.33%) transposase NA
DBSCAN-SWA_2 441066 : 458627 22 Streptococcus_phage(78.57%) transposase NA
DBSCAN-SWA_3 1072797 : 1108407 55 Clostridium_phage(98.11%) portal,terminase,integrase,tail,capsid attL 1063202:1063217|attR 1083446:1083461
DBSCAN-SWA_4 1111817 : 1128312 21 Clostridium_phage(95.24%) plate,holin,tail NA
DBSCAN-SWA_5 1506816 : 1581008 69 Clostridium_phage(42.86%) transposase,plate,protease,portal,tRNA,integrase,tail attL 1506039:1506057|attR 1582485:1582503
DBSCAN-SWA_6 1660770 : 1670497 11 Pandoravirus(37.5%) NA NA
DBSCAN-SWA_7 3203501 : 3212454 8 Catovirus(50.0%) NA NA
DBSCAN-SWA_8 3365206 : 3413387 69 Clostridium_phage(83.33%) plate,portal,holin,terminase,tail,capsid NA
DBSCAN-SWA_9 3882030 : 3900869 18 Streptococcus_phage(78.57%) transposase NA
DBSCAN-SWA_10 3939497 : 3948490 11 Streptococcus_phage(100.0%) transposase NA
Click the colored protein region to show detailed information
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
NZ_CP010905.2|WP_011860989.1|1080026_1080227_+|hypothetical-protein 1080026_1080227_+ 66 aa aa NA NA NA 1072797-1108407 yes