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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP010959 Sphingobium sp. YBL2 plasmid 5pYBL2-5, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP010960 Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP010954 Sphingobium sp. YBL2 chromosome, complete genome 0 crisprs csa3,RT,DEDDh,cas3,DinG,WYL 0 0 7 0
NZ_CP010957 Sphingobium sp. YBL2 plasmid 3pYBL2-3, complete sequence 0 crisprs csa3 0 0 0 0
NZ_CP010956 Sphingobium sp. YBL2 plasmid 2pYBL2-2, complete sequence 0 crisprs csa3,RT 0 0 17 0
NZ_CP010955 Sphingobium sp. YBL2 plasmid 1pYBL2-1, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP010958 Sphingobium sp. YBL2 plasmid 4pYBL2-4, complete sequence 0 crisprs NA 0 0 0 0

Results visualization

1. NZ_CP010956
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 36720 36 Escherichia_phage(45.45%) transposase NA
DBSCAN-SWA_2 56689 : 57868 1 uncultured_virus(100.0%) NA NA
DBSCAN-SWA_3 65937 : 105398 37 uncultured_Caudovirales_phage(18.75%) transposase,integrase attL 78865:78880|attR 107169:107184
DBSCAN-SWA_4 113042 : 115544 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_5 122701 : 123568 1 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_6 127887 : 134208 4 Ralstonia_phage(66.67%) integrase attL 127702:127717|attR 137674:137689
DBSCAN-SWA_7 139486 : 141082 1 Ostreococcus_tauri_virus(100.0%) NA NA
DBSCAN-SWA_8 144918 : 146954 2 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_9 152204 : 153971 1 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_10 157713 : 158082 1 Salmonella_phage(100.0%) NA NA
DBSCAN-SWA_11 165286 : 167209 1 Synechococcus_phage(100.0%) NA NA
DBSCAN-SWA_12 173948 : 174974 1 Moumouvirus(100.0%) NA NA
DBSCAN-SWA_13 180197 : 181733 1 Catovirus(100.0%) NA NA
DBSCAN-SWA_14 188595 : 196220 5 uncultured_virus(33.33%) transposase NA
DBSCAN-SWA_15 200297 : 206966 6 Ochrobactrum_phage(50.0%) transposase NA
DBSCAN-SWA_16 210703 : 211867 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_17 215260 : 220444 4 Micromonas_sp._RCC1109_virus(66.67%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP010954
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 204331 : 210007 8 uncultured_Mediterranean_phage(66.67%) NA NA
DBSCAN-SWA_2 755787 : 820940 50 Stenotrophomonas_phage(18.18%) integrase,tRNA,transposase attL 788945:788961|attR 806884:806900
DBSCAN-SWA_3 2352857 : 2409073 53 Staphylococcus_phage(11.11%) integrase,protease attL 2366794:2366809|attR 2415326:2415341
DBSCAN-SWA_4 2708310 : 2729848 17 Indivirus(100.0%) transposase NA
DBSCAN-SWA_5 2864338 : 2872463 17 uncultured_Caudovirales_phage(12.5%) NA NA
DBSCAN-SWA_6 2883434 : 2892912 11 Stenotrophomonas_phage(33.33%) terminase,protease,portal NA
DBSCAN-SWA_7 4519114 : 4565661 52 uncultured_Mediterranean_phage(10.53%) capsid,portal,tail,protease,head,transposase,tRNA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage