CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_LN515532	Porphyromonadaceae bacterium ING2-E5B genome assembly E5B, chromosome : chrI	2 crisprs	csa3,cas3,DEDDh,WYL,RT	0	0	2	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_LN515532_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LN515532_1

623312-623797

Orphan

Consensus_repeat	Method
CTATTAATCGTACAATGGTTGAATTGAAAT	CRISPRCasFinder
CTATTAATCGTACAATGGTTGAATTGAAAT	CRT
CTATTAATCGTACAATGGTTGAATTGAAAT	PILER-CR

7 spacers

The CRISPR arrays of NZ_LN515532_1

>merge|NZ_LN515532|1|623312-623797|CRISPRCasFinder,CRT,PILER-CR
GTTACAATCGTACAATGGTTGAATTGAAATAGATCTATCAACTCGACATCGACAAAATTTAATACTATTAATCGTACAATGGTTGAATTGAAATTGAACAGACTTTTGAAACAGTTGATGAAGCAAAGCTATTAATCGTACAATGGTTGAATTGAAATTTAAATCGTAATCACGACTATTACCAACGGTTAGCCTATTAATCATACAATGGTTGAATTGAAATACGATTTGAAAGCTTTTCACCTCACCGATGCAATCCTATTAATCGTACAATGGTTGAATTGAAATTCGTTTGAGGGGTTGCAAAGATCAATGGATTCTTTTCACTATTAATCGTACAATGGTTGAATTGAAATCTCGGTTACGGGCAACCTGAAAGCCCTGACAATGCCTATTAATCGTACAATGGTTGAATTGAAATGATATTTTTTGGTCCACGTCTTCGGGAGCGGGAGACTATTAATCGTACAATGGTTGAATTGAAAT

>NZ_LN515532|1|1|623312-623797|CRISPRCasFinder
GTTACAATCGTACAATGGTTGAATTGAAAT	AGATCTATCAACTCGACATCGACAAAATTTAATA
CTATTAATCGTACAATGGTTGAATTGAAAT	TGAACAGACTTTTGAAACAGTTGATGAAGCAAAG
CTATTAATCGTACAATGGTTGAATTGAAAT	TTAAATCGTAATCACGACTATTACCAACGGTTAGC
CTATTAATCATACAATGGTTGAATTGAAAT	ACGATTTGAAAGCTTTTCACCTCACCGATGCAATC
CTATTAATCGTACAATGGTTGAATTGAAAT	TCGTTTGAGGGGTTGCAAAGATCAATGGATTCTTTTCA
CTATTAATCGTACAATGGTTGAATTGAAAT	CTCGGTTACGGGCAACCTGAAAGCCCTGACAATGC
CTATTAATCGTACAATGGTTGAATTGAAAT	GATATTTTTTGGTCCACGTCTTCGGGAGCGGGAGA
CTATTAATCGTACAATGGTTGAATTGAAAT

>NZ_LN515532|1|1|623312-623797|CRT
GTTACAATCGTACAATGGTTGAATTGAAAT	AGATCTATCAACTCGACATCGACAAAATTTAATA
CTATTAATCGTACAATGGTTGAATTGAAAT	TGAACAGACTTTTGAAACAGTTGATGAAGCAAAG
CTATTAATCGTACAATGGTTGAATTGAAAT	TTAAATCGTAATCACGACTATTACCAACGGTTAGC
CTATTAATCATACAATGGTTGAATTGAAAT	ACGATTTGAAAGCTTTTCACCTCACCGATGCAATC
CTATTAATCGTACAATGGTTGAATTGAAAT	TCGTTTGAGGGGTTGCAAAGATCAATGGATTCTTTTCA
CTATTAATCGTACAATGGTTGAATTGAAAT	CTCGGTTACGGGCAACCTGAAAGCCCTGACAATGC
CTATTAATCGTACAATGGTTGAATTGAAAT	GATATTTTTTGGTCCACGTCTTCGGGAGCGGGAGA
CTATTAATCGTACAATGGTTGAATTGAAAT

>NZ_LN515532|1|1|623376-623797|PILER-CR
CTATTAATCGTACAATGGTTGAATTGAAAT	TGAACAGACTTTTGAAACAGTTGATGAAGCAAAG
CTATTAATCGTACAATGGTTGAATTGAAAT	TTAAATCGTAATCACGACTATTACCAACGGTTAGC
CTATTAATCATACAATGGTTGAATTGAAAT	ACGATTTGAAAGCTTTTCACCTCACCGATGCAATC
CTATTAATCGTACAATGGTTGAATTGAAAT	TCGTTTGAGGGGTTGCAAAGATCAATGGATTCTTTTCA
CTATTAATCGTACAATGGTTGAATTGAAAT	CTCGGTTACGGGCAACCTGAAAGCCCTGACAATGC
CTATTAATCGTACAATGGTTGAATTGAAAT	GATATTTTTTGGTCCACGTCTTCGGGAGCGGGAGA
CTATTAATCGTACAATGGTTGAATTGAAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LN515532.1\|WP_045089208.1\|629628_629859_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LN515532.1\|WP_052673099.1\|621550_622936_+\|IS66-family-transposase	unknown	unknown	gnl\|CDD\|376980
NZ_LN515532.1\|WP_045089197.1\|614107_617266_-\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|274948
NZ_LN515532.1\|WP_082057332.1\|609561_610764_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379841
NZ_LN515532.1\|WP_045089200.1\|619086_619794_-\|DsbA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|239322
NZ_LN515532.1\|WP_045089196.1\|612139_614080_-\|RagB/SusD-family-nutrient-uptake-outer-membrane-protein	unknown	unknown	gnl\|CDD\|369630
NZ_LN515532.1\|WP_045089205.1\|625604_626384_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293799
NZ_LN515532.1\|WP_045089195.1\|610776_612114_-\|DUF4959-domain-containing-protein	unknown	unknown	gnl\|CDD\|379822
NZ_LN515532.1\|WP_052673100.1\|623824_624325_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LN515532.1\|WP_045089201.1\|619945_621109_+\|IS4-family-transposase	unknown	unknown	gnl\|CDD\|372999
NZ_LN515532.1\|WP_045089209.1\|629919_630531_+\|YggS-family-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|143483
NZ_LN515532.1\|WP_045089204.1\|625174_625516_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LN515532.1\|WP_052673102.1\|626468_626888_+\|DUF5320-domain-containing-protein	unknown	unknown	gnl\|CDD\|379955
NZ_LN515532.1\|WP_045089199.1\|618167_619046_+\|polysaccharide-deacetylase-family-protein	unknown	unknown	gnl\|CDD\|200589
NZ_LN515532.1\|WP_045089206.1\|626910_627147_+\|ferrous-iron-transport-protein-A	unknown	unknown	gnl\|CDD\|377199
NZ_LN515532.1\|WP_082057333.1\|624340_624934_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377531
NZ_LN515532.1\|WP_052673103.1\|628868_629534_+\|methyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|369777
NZ_LN515532.1\|WP_045089198.1\|617579_618008_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|373187
NZ_LN515532.1\|WP_045089207.1\|627147_628872_+\|ferrous-iron-transporter-B	unknown	unknown	gnl\|CDD\|223447
NZ_LN515532.1\|WP_045089203.1\|623033_623249_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_LN515532.1\|WP_052673099.1\|621550_622936_+\|IS66-family-transposase	gnl\|CDD\|376980	pfam03050, DDE_Tnp_IS66, Transposase IS66 family. Transposase proteins are necessary for efficient DNA transposition. This family includes IS66 from Agrobacterium tumefaciens.	1.92034e-100
NZ_LN515532.1\|WP_045089197.1\|614107_617266_-\|TonB-dependent-receptor	gnl\|CDD\|274948	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family. This model describes a distinctive clade among the TonB-linked outer membrane proteins (OMP). Members of this family are restricted to the Bacteriodetes lineage (except for Gemmatimonas aurantiaca T-27 from the novel phylum Gemmatimonadetes) and occur in high copy numbers, with over 100 members from Bacteroides thetaiotaomicron VPI-5482 alone. Published descriptions of members of this family are available for RagA from Porphyromonas gingivalis, SusC from Bacteroides thetaiotaomicron, and OmpW from Bacteroides caccae. Members form pairs with members of the SusD/RagB family (pfam07980). Transporter complexes including these outer membrane proteins are likely to import large degradation products of proteins (e.g. RagA) or carbohydrates (e.g. SusC) as nutrients, rather than siderophores. [Transport and binding proteins, Unknown substrate].	0
NZ_LN515532.1\|WP_082057332.1\|609561_610764_-\|hypothetical-protein	gnl\|CDD\|379841	pfam16389, DUF4998, Domain of unknown function. This family around 200 residues locates in the N-terminal of some uncharacterized proteins in various Bacteroides and Parabacteroides species. The function of this family remains unknown.	3.46563e-22
NZ_LN515532.1\|WP_045089200.1\|619086_619794_-\|DsbA-family-oxidoreductase	gnl\|CDD\|239322	cd03024, DsbA_FrnE, DsbA family, FrnE subfamily; FrnE is a DsbA-like protein containing a CXXC motif. It is presumed to be a thiol oxidoreductase involved in polyketide biosynthesis, specifically in the production of the aromatic antibiotics frenolicin and nanaomycins.	5.02305e-93
NZ_LN515532.1\|WP_082057333.1\|624340_624934_-\|hypothetical-protein	gnl\|CDD\|377531	pfam05598, DUF772, Transposase domain (DUF772). This presumed domain is found at the N-terminus of many proteins found in transposons.	6.63051e-08
NZ_LN515532.1\|WP_045089205.1\|625604_626384_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293799	cd07713, DHPS-like_MBL-fold, Methanocaldococcus jannaschii dihydropteroate synthase, Thermoanaerobacter tengcongensis Tflp, and related proteins; MBL-fold metallo hydrolase domain. This subgroup includes Methanocaldococcus jannaschii 7,8-dihydropterin-6-methyl-4-(beta-D-ribofuranosyl)-aminobenzene-5'-phosphate synthase (EC 2.5.1.15), a folate biosynthetic enzyme also known as dihydropteroate synthase and 7,8 dihydropteroate synthase. Thermoanaerobacter tengcongensis Tflp is a ferredoxin-like member. Members of this subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions.	1.20808e-96
NZ_LN515532.1\|WP_045089195.1\|610776_612114_-\|DUF4959-domain-containing-protein	gnl\|CDD\|379822	pfam16323, DUF4959, Domain of unknown function (DUF4959). This family consists of uncharacterized proteins around 400 residues in length and is mainly found in various Bacteroides, Pedobacter and Parabacteroides species. Several proteins are annotated as Galactose-binding like proteins, but the specific function of this protein is unknown.	5.35081e-33
NZ_LN515532.1\|WP_045089196.1\|612139_614080_-\|RagB/SusD-family-nutrient-uptake-outer-membrane-protein	gnl\|CDD\|369630	pfam07980, SusD_RagB, SusD family. This domain is found in bacterial cell surface proteins such SusD and SusD-like proteins, as as well RagB, outer membrane surface receptor antigen. Bacteroidetes, one of the two dominant bacterial phyla in the human gut, are Gram-negative saccharolytic microorganisms that utilize a diverse array of glycans. Hence, they express starch-utilization system (Sus) for glycan uptake. SusD has 551 amino acids, and is almost entirely alpha-helical, with 22 alpha-helices, eight of which form 4 tetra-trico peptide repeats (TPRs: helix-turn-helix motifs involved in protein-protein interactions). The four TPRs pack together to create a right-handed super-helix. This is predicted to mediate the formation of SusD and SusC porin complex at the cell surface. The interaction between SusC and TPR1/TPR2 region of SusD is predicted to be of functional importance since it allows SusD to be in position for oligosaccharide capture from other Sus lipoproteins and delivery of these glycans to the SusC porin. The non-TPR containing portion of SusD is where starch binding occurs. The binding site is a shallow surface cavity located on top of TPR1. SusD homologs such as SusD-like proteins have a critical role in carbohydrate acquisition. Both SusD and its homologs, contain about 15-20 residues at the N-terminus that might be a flexible linker region, anchoring the protein to the membrane and the glycan-binding domain. Other homologs to SusD have been examined in Porphyromonas gingivalis such as RagB, an immunodominant outer-membrane surface receptor antigen. Structural characterization of RagB shows substantial similarity with Bacteroides thetaiotaomicron SusD (i.e alpha-helices and TPR regions). Based on this structural similarity, functional studies suggest that, RagB binding of glycans occurs at pockets on the molecular surface that are distinct from those of SusD.	2.28835e-51
NZ_LN515532.1\|WP_045089201.1\|619945_621109_+\|IS4-family-transposase	gnl\|CDD\|372999	pfam14294, DUF4372, Domain of unknown function (DUF4372). This domain family is found in bacteria, and is approximately 80 amino acids in length. The family is found in association with pfam01609. There is a single completely conserved residue G that may be functionally important.	2.73337e-32
NZ_LN515532.1\|WP_045089209.1\|629919_630531_+\|YggS-family-pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|143483	cd00635, PLPDE_III_YBL036c_like, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzymes, YBL036c-like proteins. This family contains mostly uncharacterized proteins, widely distributed among eukaryotes, bacteria and archaea, that bear similarity to the yeast hypothetical protein YBL036c, which is homologous to a Pseudomonas aeruginosa gene that is co-transcribed with a known proline biosynthetic gene. YBL036c is a single domain monomeric protein with a typical TIM barrel fold. It binds the PLP cofactor and has been shown to exhibit amino acid racemase activity. The YBL036c structure is similar to the N-terminal domain of the fold type III PLP-dependent enzymes, bacterial alanine racemase and eukaryotic ornithine decarboxylase, which are two-domain dimeric proteins. The lack of a second domain in YBL036c may explain limited D- to L-alanine racemase or non-specific racemase activity.	9.64094e-86
NZ_LN515532.1\|WP_052673102.1\|626468_626888_+\|DUF5320-domain-containing-protein	gnl\|CDD\|379955	pfam17253, DUF5320, Family of unknown function (DUF5320). A number of this family members have a coiled coil domain at the C terminal.	2.87216e-13
NZ_LN515532.1\|WP_045089199.1\|618167_619046_+\|polysaccharide-deacetylase-family-protein	gnl\|CDD\|200589	cd10967, CE4_GLA_like_6s, Putative catalytic NodB homology domain of gellan lyase and similar proteins. This family is represented by the extracellular polysaccharide-degrading enzyme, gellan lyase (gellanase, EC 4.2.2.-), from Bacillus sp. The enzyme acts on gellan exolytically and releases a tetrasaccharide of glucuronyl-glucosyl-rhamnosyl-glucose with unsaturated glucuronic acid at the nonreducing terminus. The family also includes many uncharacterized prokaryotic polysaccharide deacetylases, which show high sequence similarity to Bacillus sp. gellan lyase. Although their biological functions remain unknown, all members of the family contain a conserved domain with a 6-stranded beta/alpha barrel, which is similar to the catalytic NodB homology domain of rhizobial NodB-like proteins, belonging to the larger carbohydrate esterase 4 (CE4) superfamily.	2.11396e-45
NZ_LN515532.1\|WP_045089206.1\|626910_627147_+\|ferrous-iron-transport-protein-A	gnl\|CDD\|377199	pfam04023, FeoA, FeoA domain. This family includes FeoA a small protein, probably involved in Fe2+ transport. This presumed short domain is also found at the C-terminus of a variety of metal dependent transcriptional regulators. This suggests that this domain may be metal-binding. In most cases this is likely to be either iron or manganese.	6.94147e-16
NZ_LN515532.1\|WP_052673103.1\|628868_629534_+\|methyltransferase-domain-containing-protein	gnl\|CDD\|369777	pfam08241, Methyltransf_11, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	2.26585e-31
NZ_LN515532.1\|WP_045089198.1\|617579_618008_+\|hypothetical-protein	gnl\|CDD\|373187	pfam14646, MYCBPAP, MYCBP-associated protein family. This family of eukaryotic proteins includes the mammalian MYCBP-associated proteins. These proteins may be synaptic processes and may have a role in spermatogenesis.	0.00486678
NZ_LN515532.1\|WP_045089207.1\|627147_628872_+\|ferrous-iron-transporter-B	gnl\|CDD\|223447	COG0370, FeoB, Fe2+ transport system protein B [Inorganic ion transport and metabolism].	6.59019e-127

>NZ_LN515532.1|WP_045089203.1|623033_623249_-|hypothetical-protein
MWSIQQFKLVYDRFLSNGLSVTDFCANESILHSKFYYWKKKLHEQNQLREQSSDFVPIVFSGSNTQLPAKR
>NZ_LN515532.1|WP_052673099.1|621550_622936_+|IS66-family-transposase
MIDFEGIDLLPEEKELAEAAKADIETFKERRVKERVKRKPVRKSLPEGLPRVEEHLYPDEVKDSADTLTELEPEITEVMEYEPGRCWIRKIIRHKYVLKSKTEQDSHKSSSIITAPLPAKYQPIARSYAGASLLAELMINKYVNHLPFYRQIQMMKQLGVNLPPPTVNDWFKDTADLLRPLYYRLKEIVLATDYIQVDETTVPIINNEKHKSVNGYMWMVRSAMDKQVFFHYDNGSRAQKVALSLLKDFRGAMQTDGYSVYQMYEYKKGVLPLGCWAHARRKFEESLKNDRERAEYALEQIGLLYEVEREADDKSLSYRERAKLRETHAYPIMVVFGKWLVNEYSKVLPKSPIGKAIKYCYDIYHRLSRYHLDGRYHIDNNLAENSLRGLALGRKNYLFCGNHDAAEDAAVIYSLLGCCKAAEVNFRDWMVYVLSHIHDYDQDYTMDLAELLPLNHLRKIS
>NZ_LN515532.1|WP_045089201.1|619945_621109_+|IS4-family-transposase
MNKGKFVYAQIVEFLPQRVFDTIVLKYDGNRYVKHFTCWNQLLVMVFGQLTNRDSLRDLIVAIEAHNRKSYHLGFGKSVTRSNLSKANENRNHRIFEEFAYYLIGVARQKLENNDFEIKGKVYAFDSTTVDLCLSVFWWAKFRKNKGGVKIHTLLDITTQIPVFVHITTASVNDVNAMDIIPYEAGAYYIFDRGYVDYTRLYKITKLESSFVIRARKNLKFEVKTNNPVDETTGVITDQTGFLKGFYTSKDYPESLRRVAFYDKDKNTTLIFLTNNFELTAEQVAMLYKNRWQIELFFKWIKQHLKIKSFWGTSQNAVRIQIYSAIIAYCMVAIVGHDLQIDRTTYEILQILGISLLDKTPVNELFTNIDINDVKERNDNQLTLNLF
>NZ_LN515532.1|WP_045089200.1|619086_619794_-|DsbA-family-oxidoreductase
MKIEIWSDVMCPFCYIGKRNFETALEQFSNKNGIEVEWKSFQLDPSLPEVQDSNYTDYLMVSKGLGRPQVEGMLNNVTQMAKGVGLEYDFDRAVMVNSFKAHRVLQLAKMRGLGDAAEERLFRAFFTEGRNIADDETLLELGKEAGLNETEIRSSLSDERYSDMVRQDIQEARAIGVTGVPFFVFNRKYAVSGAQPPQAFLQTLEKAYAEWREANPEIKIEVTKGQSCSIDGVCD
>NZ_LN515532.1|WP_045089199.1|618167_619046_+|polysaccharide-deacetylase-family-protein
MRQYYNIVLAAAVTAVLALLFFNIFSDRYKEREYNSSFEWPEGKKMGLSLTFDDGRNSQIDKGIPLFDKYGVKGTFYVSTQNIIGRTEKWRRAAANGHEIGNHTLSHPCTGNFTWTMGNELEYFTLDRMRDDLEAASEIIRDSLGVDPVSFAYPCGQTFVGSGIETKSYVPLVATMFQTGRGWLDEGPNDPMICDMAHLLGMNMDGMSFREVKRMIEFAKRTGKWLILVGHEMDVKGDQTTYLSTLDAICKYATDPANEIWIDNVQNIASYISEKRNDIIVAKALHEEFITE
>NZ_LN515532.1|WP_045089198.1|617579_618008_+|hypothetical-protein
MKTKKNALYVLFALILTGLISCNHGFDDCTNTIYIKNNSAKSIYAVSTLKKDFFNFNPTNENYKDDFMIEPGETIKVKIGIKLQCWEQTLEQTGGYVYIYVYDAEYLENPDVRWEDAQKNHIKLYTLNVNDLRDMKWEVKYP
>NZ_LN515532.1|WP_045089197.1|614107_617266_-|TonB-dependent-receptor
MSKIKTLKTPKIIALCVAVSLFSMNTVASSSNSSAVDVQSVQQNRRPISGVVVDGNNDPLPGVTVMVPSRQGGVITDVDGAYTIEAATGEELRFQFLGMKTVTIEVGSGTIYNVQLLEDVEMLDEVTVTAFATQKKESVVSSIETISPSELKVPSSNLTTALAGRLAGVISYQRSGEPGADNAQFFVRGVTTFGYASSPLILLDGFEVDANALARVDPDNIASFSVLKDATSAALYGSKGANGVIMVTTKKGQAGAPKISFRAEGRLSTPTKVQKTVDGITYMNLYNQAQFNDNPLLEPYYNAQKIQNTMEGLNEYAYPNINWYDEMFNSNAFNQYYNFNVSGGGSVVRYYLAVSYNKEEGILKNNRLNNFKNNIDIDRFNILANITMDLTPTTVFDINMNSIFENYTGPLDNTDDVFKSVMNSNPVEFPKFYLPDEDHAYVKHTLFGSDATGSMMNPFAQMVRGYKDGSTGRITSQFSLDQNLDALTEGLMARGKVSIKSDSYHESKRSYTPYLYNIKNYDAFNDTYVLQEVRRGTDALGDPEQWRDGVFRLYLEGGLTYARRFAGVHDVSGLLIYTQEEIKNTSGNPGSIQRTLPQRLQGMRARFNYGFDDRYLAEMSLTYTGSEKFASDHRWGIFPAMGVGYILSNESYWEPLQDVMPMFKLKYSLGMVGNDQIAGPEDRFFFLSDIDPGSWGYRWGRNFNSSYGGFNINRYANPQITWEIAVKQNVGFEMDLFKNRALKVIVEYFTENREQIYQARANLPETMGLTSNVYGNVGEVKSAGWDGSIDLNHSFNKDLWISGRFNFTYAHNEIIENEEPEYRWSYLSNIGWPINTWKGYIAERLFIDEADVANSPRQELGGIVRAGDIKYKDINGDGRVNSDDQVHIGYPIVPEITYGFGLSGGYKNFDLSFFMQGQDRVSFFINPNNIAPFVEQRNAMQYIADDHWNPNNPVAKAFWPRLSASYNDNNNVSNSTWWIRNGRFLRMKNAELGYTLPKNFFPSTGIESLRLYLAGQNLFNLSDFKLWDPEMGGEGFNYPLQKVYSVGLTVSF
>NZ_LN515532.1|WP_045089196.1|612139_614080_-|RagB/SusD-family-nutrient-uptake-outer-membrane-protein
MKYKIFTICLIGISMLFTGCDFLDVVPDNTVEVGSLFENRDKALNALSTCYRYMPNYEKIHESMSLAGDEWLGRLDSDYANNRGINRGIKLMRGLNNSNDPILNYWAGGGGANSLYEGIRVCNIFLQNIEDVPDLTPREKKDWIAQVKILKAYYHYYLTRLYGPIVIADENLEPYSSVEDVRQERQSIDSCFNYVVGLIDEVLTEGDLSISRDASFLGQVDQQIAKAIKAEVLLTRASPLFNGNSEFYSNFKGINGELLFPMQYDESKWKDALDAITEAIEIAEANGKKLYEYKGTPKFWDVDNFATSEIIQYAYNERFSIVEPWNDEVIWGYSGLDYEGQGGFAHATNMRSVADPTQAGYAWQWLGADYRMVERFYSKNGVPIEDDITYEYDGRLEITTVPNDTYHKGYMQDGEKTIKLHLNREPRFYAWLAVDRSIWRTHDIANDVKMRYNEFPGGRGAHHTTDFYWTGVGVKKLVHPESGTGHWARVVKYPYPILRLADLYLMYAEAYNELNGPGQPAYDALNKIRRRAGLPDIEDVWSDPSIVRNVGKHTTKEGLRDIIHTERSIELSFEGKRYFDVTRWKEAGRYFNSPVKGWNTTGVDPEQFYILMTLQNRVWQTPRDYLMPIPLWDLNRNPNLVQNPGW
>NZ_LN515532.1|WP_045089195.1|610776_612114_-|DUF4959-domain-containing-protein
MKYIYNITILFVLALLPLLNSCQDEATSGDMTPPAQIKDVQFTPLNGGGYFTYTIPEDEDFLYVRGEYQIDNGEVISKTSSVYADTLFIEGLGSVKEYQVKLFSVDRDNNHSEPVVMNVTPLIPTTAAILETVTVQPGFSSLVVDWTNDQQLTVQILVNVKVGDKDVNQIYSSNLKKDRFVIENLTGVPHTVSVHIKDTYGNETEAVDFGQITPLIDAPISKDQWAFLRDQLLYGNKWDYSSDDNPFNQRPFPEYDRLYQNDSLKNAPMSHVEGRIEKFWDNEYDYEPVLNLNYFNTGQIGYPFSYYIDMGREIKASRFKIWQRNAWGMLYTGENVEIFEIWVSNDQDASDGILDDWEYVGRYRIVKPASVIEANNEARAGHEFMFYPDNPRFTKNFRYLRFKAIKQFGNGNSGCMSEITLFGTEADGSIIEDDKVLTGPIPGWE
>NZ_LN515532.1|WP_082057332.1|609561_610764_-|hypothetical-protein
MINMKLRYILTLLLISMIGFYACESMDDNYKQYLGEYNYSGKIDSLRVYPGYERVILAWDNPRDQKSKKIKIIYGADQTEIVYDQLVDSVSIDGLAAGTGYEFTVYTMDNNGNLSVPTSVTAFPISAEFVESLTPPTIVVESKNNEQVLSFIGLSNIMMRFSGKINYAVEGPNGFDAEGVIDITDQVIKTNPSTGSVEYVTFNDLSIPVADLGLPVEFLPPGPYKFTYETTVWPIMSNLVSIDEITLGREANIEVQPVIINITALGGEVSDQFNTGGGEGIAMLVDGNIKSKYLTGNSRTPWMMFRTNEPAIVTRYEMTSGNDAPERDPKSWRLEASNDGENWVVLDERRNITFPGRESTQRFEVENDELYQYYKLQITENNGNNLFQLSEWTLFGPKLK
>NZ_LN515532.1|WP_052673100.1|623824_624325_-|hypothetical-protein
MLRKAIRKQINYLKRDVLIINKMLGTIKDEPVPFERRQQKYFFVIRHLLEQQETMYRKKSHQVEDRIVSIHQPHVRPIVRGKAKAKTEFGAKINISLLDGYARVDHFHWDAFNEGQDLQGQVERFRKLSIMISCFVYMLIICLERIESIYGCKWYTFRLEYGVLFN
>NZ_LN515532.1|WP_082057333.1|624340_624934_-|hypothetical-protein
MVPWEEFARLYYKNFKSNRGAPTKDARLVLGVIIIKHIMKTDDRGVIEMIQENPYMQYFLGLEAFTYEQVMTPSLLVSIRKRIDLDVFESLTDDLIRKGLKLKAGADQEEVDKDTKDEEDDNDDDPDPHPGNKGKLQLDATVCDADIKYPTDLDLLNGSRQKAEELIDELCLKLGVQDKPRTYRRVARKEFLNVSKM
>NZ_LN515532.1|WP_045089204.1|625174_625516_-|hypothetical-protein
MIDQLKNLLGTRLTSVWVNDESAKEFSPYRHGVRFCEAVHLSFNHPIKLISENVTCAGARRSLGFYRNDKDLAQFISGNNAIPVEFIEGALEEIPKLSQIDSVILGMDRVTNR
>NZ_LN515532.1|WP_045089205.1|625604_626384_+|MBL-fold-metallo-hydrolase
MKISILTDNNPGGNTGAEHGLSYFIEHEGTKILFDTGQSDLFLQNASLMGMDVEERDLIILSHGHFDHGNGLPHLPGGKLICHPGCFVKRYRTIDHTYIGLKNSRDEIAQKFDLTTSKAPLRVNDSMLFLGEIPRITDFESQQTSFSFEDGSPDFVADDSAVALQTEKGLFVITGCGHAGVVNTLEHAKKATGKQRIYGFMGGFHLKKRDRQTIETIHYLKKNRVEHVIPSHCTGLPALVAFAESFQIQSVRTGDTYTF
>NZ_LN515532.1|WP_052673102.1|626468_626888_+|DUF5320-domain-containing-protein
MPSGDRTGPMGQGPRTGRARGFCSGFDTPGYEDGLYRNRGWGACRDQIARSGRRIAVARGTGFGRRAGTGRGAGVVQGYSADRLYSFGLLISELIQNIPWQDILHKRDEMKELKTEAQRLKRSNEELEEKLRKLEERRE
>NZ_LN515532.1|WP_045089206.1|626910_627147_+|ferrous-iron-transport-protein-A
MESTLPVNTLAEGDKGEITSFEGGFFFRKKLEEMGFHIGTTITIVARQWMSGPVIVRFENIEVAIGFNMAKRIRVKRV
>NZ_LN515532.1|WP_045089207.1|627147_628872_+|ferrous-iron-transporter-B
MSIRIILAGYPNVGKSVVFNRLTGMDVISSNYPGTTIEIARGFLKWEGERYEMIDLPGFYSLEPTCKAEEIAVKLISRGDLIVQVVNATNLERNLNLTLQLIQQRKPMLIALNMFDETKQKGIDIDVAKLEQILDLPVVPTSALTGEGIKELVTRMKEARVSHYHFEDAQRWNEIGKITGQVQVIHPQHRSYLERLQHASVRPITGIPILVVVLFLMFTLIRVIGEGLIEFLLDPFFENMWKPLMTTLSARLSHQSLLHDLLIGDLIGGEIDFGQSFGLLTTGLHVTFGAVLPYVLAFFTLLSVLEDTGYLPRVAVMVDNLMHKVGLHGLSIIPMLLGFGCNVPGTMATRILETRKEKFIVATLIAITVPCMAMQAMLFGLLGTYGVKGVGIVYLTLFVVWLVLGMILKRTVRGRSPELFLEIPPYRRPYIGGLMKKIWMRVRWFLQEAVPFVLLGVLIVNLLYSLGFMQWVSDKVSPLFTLLSGLPGEASGALIIGFLRKDLAVGMLIPLNLTFQQLVVASVMLSMFFPCMATFSVLLKELGIKDLLKLTGIMLLCVVITGSLLHIVLSLFTG
>NZ_LN515532.1|WP_052673103.1|628868_629534_+|methyltransferase-domain-containing-protein
MNIYKELSFAMEYDQFYQSDGGRAVDMAEKAAISDLLEQVDSREMLELGCGTGHWTAFFSEKGFRVTAVDQSPAMLEQARKRVIPEVQWVDADAAHLPFSDGQFELITAITLFEFVEDRNALLSEIGRLLKPGGFLIVGWLNSLSEIGRQKKSSPTFSQAHLYTPAEIRNHLTNLGTPQFHYAVYYDHNFKLLDELSDRRTVQPAFIATIVQKRRNHADHH
>NZ_LN515532.1|WP_045089208.1|629628_629859_+|hypothetical-protein
MLEHQDLKLELFIDSEGERGRFTHLCLEYDNPEEVSDHAHQLGYRRWVKKGPHRVTHFIWDKSGNMFEIKRKEIAS
>NZ_LN515532.1|WP_045089209.1|629919_630531_+|YggS-family-pyridoxal-phosphate-dependent-enzyme
MELVAAAKTRNAEEVNAAVAAGIHAIGYNYIQEAERMRPLVGGTVPWHMIGHLQRNKVKKAVELFDMIETIDSERLALEVDKQSAAVGKVMPVLIEINSGKESNKSGVLPENAIGLICRIHHLSHLTIVGLMTMGPRFGNPKYARPYYRITKRIFDEIRQVELPGVEMRYLSMGMSNSYQIAIAEGANVIHIGTALFGESRKK

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Crispr_ID: NZ_LN515532_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LN515532_2

688654-688749

Orphan

Consensus_repeat	Method
CTATTAATCGTACAATGGTTGAATTGAAAT	CRISPRCasFinder

1 spacers

RT,WYL

The CRISPR arrays of NZ_LN515532_2

>merge|NZ_LN515532|2|688654-688749|CRISPRCasFinder
CTATTAATCGTACAATGGTTGAATTGAAATTAACTAAGGGTAATGTATCAAACGACAGTAATAATGCTATTAATCGTACAATGGTTGAATTGAAAT

>NZ_LN515532|2|2|688654-688749|CRISPRCasFinder
CTATTAATCGTACAATGGTTGAATTGAAAT	TAACTAAGGGTAATGTATCAAACGACAGTAATAATG
CTATTAATCGTACAATGGTTGAATTGAAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LN515532.1\|WP_045089262.1\|703890_705846_+\|site-specific-DNA-methyltransferase	unknown	unknown	gnl\|CDD\|225100
NZ_LN515532.1\|WP_045089255.1\|691317_693075_-\|RagB/SusD-family-nutrient-uptake-outer-membrane-protein	unknown	unknown	gnl\|CDD\|369630
NZ_LN515532.1\|WP_052673111.1\|682283_684422_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|350691
NZ_LN515532.1\|WP_045089249.1\|685898_686174_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LN515532.1\|WP_082057430.1\|687359_687659_-\|transposase	unknown	unknown	gnl\|CDD\|376980
NZ_LN515532.1\|WP_045089251.1\|688215_688575_-\|IS66-family-insertion-sequence-hypothetical-protein	unknown	unknown	unknown
NZ_LN515532.1\|WP_045089247.1\|681223_682231_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LN515532.1\|WP_045089245.1\|678581_679586_-\|WYL-domain-containing-protein	WYL	pfam13280_WYL_CAS-I:CAS-III	gnl\|CDD\|379100
NZ_LN515532.1\|WP_045089260.1\|699948_703194_+\|DEAD/DEAH-box-helicase-family-protein	unknown	unknown	gnl\|CDD\|197304
NZ_LN515532.1\|WP_045089246.1\|680030_681221_+\|RNA-directed-DNA-polymerase	RT	pfam00078_RT_CAS-I:CAS-III	gnl\|CDD\|239569
NZ_LN515532.1\|WP_045089240.1\|687643_687985_-\|transposase	unknown	unknown	gnl\|CDD\|376980
NZ_LN515532.1\|WP_045089258.1\|698567_699200_-\|SagB/ThcOx-family-dehydrogenase	unknown	unknown	gnl\|CDD\|380318
NZ_LN515532.1\|WP_045090831.1\|693087_696354_-\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|274948
NZ_LN515532.1\|WP_045089257.1\|697856_698426_-\|RNA-polymerase-sigma-70-factor	unknown	unknown	gnl\|CDD\|274376
NZ_LN515532.1\|WP_045089256.1\|696833_697799_-\|DUF4974-domain-containing-protein	unknown	unknown	gnl\|CDD\|226235
NZ_LN515532.1\|WP_045089263.1\|705847_708886_+\|DEAD/DEAH-box-helicase-family-protein	unknown	unknown	gnl\|CDD\|226115
NZ_LN515532.1\|WP_045089261.1\|703204_703843_+\|DUF4391-domain-containing-protein	unknown	unknown	gnl\|CDD\|379562
NZ_LN515532.1\|WP_045089250.1\|686212_686875_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LN515532.1\|WP_045089248.1\|684411_685923_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LN515532.1\|WP_045089254.1\|690400_691297_-\|endonuclease/exonuclease/phosphatase-family-protein	unknown	unknown	gnl\|CDD\|197317

Protein	Function_ID	Function_description	E-value
NZ_LN515532.1\|WP_045089262.1\|703890_705846_+\|site-specific-DNA-methyltransferase	gnl\|CDD\|225100	COG2189, COG2189, Adenine specific DNA methylase Mod [DNA replication, recombination, and repair].	1.44802e-39
NZ_LN515532.1\|WP_045089255.1\|691317_693075_-\|RagB/SusD-family-nutrient-uptake-outer-membrane-protein	gnl\|CDD\|369630	pfam07980, SusD_RagB, SusD family. This domain is found in bacterial cell surface proteins such SusD and SusD-like proteins, as as well RagB, outer membrane surface receptor antigen. Bacteroidetes, one of the two dominant bacterial phyla in the human gut, are Gram-negative saccharolytic microorganisms that utilize a diverse array of glycans. Hence, they express starch-utilization system (Sus) for glycan uptake. SusD has 551 amino acids, and is almost entirely alpha-helical, with 22 alpha-helices, eight of which form 4 tetra-trico peptide repeats (TPRs: helix-turn-helix motifs involved in protein-protein interactions). The four TPRs pack together to create a right-handed super-helix. This is predicted to mediate the formation of SusD and SusC porin complex at the cell surface. The interaction between SusC and TPR1/TPR2 region of SusD is predicted to be of functional importance since it allows SusD to be in position for oligosaccharide capture from other Sus lipoproteins and delivery of these glycans to the SusC porin. The non-TPR containing portion of SusD is where starch binding occurs. The binding site is a shallow surface cavity located on top of TPR1. SusD homologs such as SusD-like proteins have a critical role in carbohydrate acquisition. Both SusD and its homologs, contain about 15-20 residues at the N-terminus that might be a flexible linker region, anchoring the protein to the membrane and the glycan-binding domain. Other homologs to SusD have been examined in Porphyromonas gingivalis such as RagB, an immunodominant outer-membrane surface receptor antigen. Structural characterization of RagB shows substantial similarity with Bacteroides thetaiotaomicron SusD (i.e alpha-helices and TPR regions). Based on this structural similarity, functional studies suggest that, RagB binding of glycans occurs at pockets on the molecular surface that are distinct from those of SusD.	2.43179e-32
NZ_LN515532.1\|WP_052673111.1\|682283_684422_+\|AAA-family-ATPase	gnl\|CDD\|350691	cd17933, DEXSc_RecD-like, DEXS-box helicase domain of RecD and similar proteins. RecD is a member of the RecBCD (EC 3.1.11.5, Exonuclease V) complex. It is the alpha chain of the complex and functions as a 3'-5' helicase. The RecBCD enzyme is both a helicase that unwinds, or separates the strands of DNA, and a nuclease that makes single-stranded nicks in DNA. RecD is a member of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	1.29815e-40
NZ_LN515532.1\|WP_045089263.1\|705847_708886_+\|DEAD/DEAH-box-helicase-family-protein	gnl\|CDD\|226115	COG3587, COG3587, Restriction endonuclease [Defense mechanisms].	0
NZ_LN515532.1\|WP_045089256.1\|696833_697799_-\|DUF4974-domain-containing-protein	gnl\|CDD\|226235	COG3712, FecR, periplasmic ferric-dicitrate binding protein FecR, regulates iron transport through sigma-19 [Inorganic ion transport and metabolism, Signal transduction mechanisms].	1.0113e-28
NZ_LN515532.1\|WP_045089245.1\|678581_679586_-\|WYL-domain-containing-protein	gnl\|CDD\|379100	pfam13280, WYL, WYL domain. WYL is a Sm-like SH3 beta-barrel fold containing domain. It is a member of the WYL-like superfamily, named for three conserved amino acids found in a subset of the superfamily. However, these residues are not strongly conserved throughout the family. Rather, the conservation pattern includes four basic residues and a position often occupied by a cysteine, which are predicted to line a ligand-binding groove typical of the Sm-like SH3 beta-barrels. A WYL domain protein (sll7009) is a negative regulator of the I-D CRISPR-Cas system in Synechocystis sp. It is predicted to be a ligand-sensing domain that could bind negatively charged ligands, such as nucleotides or nucleic acid fragments, to regulate CRISPR-Cas and other defense systems such as the abortive infection AbiG system.	5.00093e-28
NZ_LN515532.1\|WP_045089261.1\|703204_703843_+\|DUF4391-domain-containing-protein	gnl\|CDD\|379562	pfam14335, DUF4391, Domain of unknown function (DUF4391). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and archaea. Proteins in this family are typically between 220 and 257 amino acids in length.	5.51341e-43
NZ_LN515532.1\|WP_045089246.1\|680030_681221_+\|RNA-directed-DNA-polymerase	gnl\|CDD\|239569	cd03487, RT_Bac_retron_II, RT_Bac_retron_II: Reverse transcriptases (RTs) in bacterial retrotransposons or retrons. The polymerase reaction of this enzyme leads to the production of a unique RNA-DNA complex called msDNA (multicopy single-stranded (ss)DNA) in which a small ssDNA branches out from a small ssRNA molecule via a 2'-5'phosphodiester linkage. Bacterial retron RTs produce cDNA corresponding to only a small portion of the retron genome.	3.70634e-66
NZ_LN515532.1\|WP_045089240.1\|687643_687985_-\|transposase	gnl\|CDD\|376980	pfam03050, DDE_Tnp_IS66, Transposase IS66 family. Transposase proteins are necessary for efficient DNA transposition. This family includes IS66 from Agrobacterium tumefaciens.	1.08277e-11
NZ_LN515532.1\|WP_045089258.1\|698567_699200_-\|SagB/ThcOx-family-dehydrogenase	gnl\|CDD\|380318	cd02142, McbC_SagB-like_oxidoreductase, oxidase similar to the microcin B17 processing protein McbC. This family is the oxidase domain of NRPS (non-ribosomal peptide synthetase) and other systems that modify polypeptides by cyclizing a thioester to form a ring. These include EpoB, part of the epothilone biosynthesis pathway; TubD, part of the tubulysin biosynthesis pathway, MtsD, part of the myxothiozol biosynthesis pathway; IndC, part of the indigoidine biosynthesis pathway and TfxB, part of the trifitoxin processing pathway. All are FMN-dependent and oxidize the product of the cyclization of thioesters in short polypeptides.	8.1793e-27
NZ_LN515532.1\|WP_045090831.1\|693087_696354_-\|TonB-dependent-receptor	gnl\|CDD\|274948	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family. This model describes a distinctive clade among the TonB-linked outer membrane proteins (OMP). Members of this family are restricted to the Bacteriodetes lineage (except for Gemmatimonas aurantiaca T-27 from the novel phylum Gemmatimonadetes) and occur in high copy numbers, with over 100 members from Bacteroides thetaiotaomicron VPI-5482 alone. Published descriptions of members of this family are available for RagA from Porphyromonas gingivalis, SusC from Bacteroides thetaiotaomicron, and OmpW from Bacteroides caccae. Members form pairs with members of the SusD/RagB family (pfam07980). Transporter complexes including these outer membrane proteins are likely to import large degradation products of proteins (e.g. RagA) or carbohydrates (e.g. SusC) as nutrients, rather than siderophores. [Transport and binding proteins, Unknown substrate].	0
NZ_LN515532.1\|WP_045089257.1\|697856_698426_-\|RNA-polymerase-sigma-70-factor	gnl\|CDD\|274376	TIGR02985, Sig70_bacteroi1, RNA polymerase sigma-70 factor, Bacteroides expansion family 1. This group of sigma factors are members of the sigma-70 family (TIGR02937) and are found primarily in the genus Bacteroides. This family appears to have resulted from a lineage-specific expansion as B. thetaiotaomicron VPI-5482, Bacteroides forsythus ATCC 43037, Bacteroides fragilis YCH46 and Bacteroides fragilis NCTC 9343 contain 25, 12, 24 and 23 members, respectively. There are currentlyonly two known members of this family outside of the Bacteroides, in Rhodopseudomonas and Bradyrhizobium.	1.93193e-47
NZ_LN515532.1\|WP_082057430.1\|687359_687659_-\|transposase	gnl\|CDD\|376980	pfam03050, DDE_Tnp_IS66, Transposase IS66 family. Transposase proteins are necessary for efficient DNA transposition. This family includes IS66 from Agrobacterium tumefaciens.	2.04647e-12
NZ_LN515532.1\|WP_045089260.1\|699948_703194_+\|DEAD/DEAH-box-helicase-family-protein	gnl\|CDD\|197304	cd10311, PLDc_N_DEXD_c, N-terminal putative catalytic domain of uncharacterized prokaryotic and archeal HKD family nucleases fused to a DEAD/DEAH box helicase domain. N-terminal putative catalytic domain of uncharacterized prokaryotic and archeal HKD family nucleases fused to a DEAD/DEAH box helicase domain. All members of this subfamily are uncharacterized. Other characterized members of the superfamily that have a related domain architecture ( containing a DEAD/DEAH box helicase domain), include the DNA/RNA helicase superfamily II (SF2) and Res-subunit of type III restriction endonucleases. In addition to the helicase-like region, members of this subfamily also contain one copy of the conserved HKD motif (H-x-K-x(4)-D, where x represents any amino acid residue) in the N-terminal putative catalytic domain. The HKD motif characterizes the phospholipase D (PLD, EC 3.1.4.4) superfamily.	7.58462e-71
NZ_LN515532.1\|WP_045089254.1\|690400_691297_-\|endonuclease/exonuclease/phosphatase-family-protein	gnl\|CDD\|197317	cd09083, EEP-1, Exonuclease-Endonuclease-Phosphatase domain; uncharacterized family 1. This family of uncharacterized proteins belongs to a superfamily that includes the catalytic domain (exonuclease/endonuclease/phosphatase, EEP, domain) of a diverse set of proteins including the ExoIII family of apurinic/apyrimidinic (AP) endonucleases, inositol polyphosphate 5-phosphatases (INPP5), neutral sphingomyelinases (nSMases), deadenylases (such as the vertebrate circadian-clock regulated nocturnin), bacterial cytolethal distending toxin B (CdtB), deoxyribonuclease 1 (DNase1), the endonuclease domain of the non-LTR retrotransposon LINE-1, and related domains. These diverse enzymes share a common catalytic mechanism of cleaving phosphodiester bonds. Their substrates range from nucleic acids to phospholipids and perhaps, proteins.	8.99253e-116

>NZ_LN515532.1|WP_045089251.1|688215_688575_-|IS66-family-insertion-sequence-hypothetical-protein
MWSIQQFKLVYDRFLSSGLSVTDFCANECILHSKFYYWKKKLHEQNQLREQPSDFVPIVFSGSNTQLPAKRKVQHKPILEHNAPASGDVFEIVYPNGVKLRVPVGADINQLRSLILLTQ
>NZ_LN515532.1|WP_045089240.1|687643_687985_-|transposase
MMQENKENPNELLELLLEKCDRLYQENMLLKGKLEDRTDVDALKTSYEQTISKKDVLPLGCWAHARRKFEESLKNDKVRAEYALEQIGLLYEVEREADDKNLSYKTAMTSITG
>NZ_LN515532.1|WP_082057430.1|687359_687659_-|transposase
MYHRLSRYHLDGRYHIDNNLAENSLKGLALGRKNYLFCGNHDAAEDAAVIYSLLGCCKAADVNFRDWMVYVLSHIHDYDEDYTKDLAELLPLNHLRKTS
>NZ_LN515532.1|WP_045089250.1|686212_686875_+|hypothetical-protein
MINIELLKKLTFIADITKKLEPFLFDDIEICINKLLENSDDVVYACQVLKVPFTTYEPENGHTPDEINVKFGCEVGLNIIYQTTYILKEIYGDALDVYISYATEPEGDEKKTIIGTYITRDKDFTNISAPITANEILKLDIKNMDWEEFSSLFPNNKHDANRACTYIIRQENYEPDDYYDDYDHDDYGSSYEKYGGYNGWSDDVIDDAFEGDPMNTWNVD
>NZ_LN515532.1|WP_045089249.1|685898_686174_+|hypothetical-protein
MESNRNQIANPHSHTHCQASQANAKTQAWQRVYLSNRTTKTTDKQTDEKEQRRHNITYTQAGVSFFVRQKSAIFEVQLFVGSSVVKIPACV
>NZ_LN515532.1|WP_045089248.1|684411_685923_+|hypothetical-protein
MSFKEIKELRQTGKLEEALQMANQALETEPENIWNKRAAAWVYYEYLKKNAQPESFIAFKENLIKIKNLQLPEDEKMVFDNCAWQIGSLVFALQKTEHVDYGKINELFEIIRDYHFTKPSEAYSFIYKAFHKGYQNWSNYLTFADWWNFENLRSEDYLKEEFKGKKMMSIAEQAFIAYSKKLLEGEPLDPFGQQRIIDKEKIQSFLPKLDSLIDKQPDYQYPPYFKAKLLLASGSDENVLSAFIPFAKQKRNDFWVWELMAEIFSEDKEIQFACYCKALSLKTPEDFLVKLRETFSEILIEKKMYNEAKTEIQKVIATRAKHEWKLPNQIVQWKEQEWYNSAIAKKDNNDLYSKHFKQAEEILFQDIPEELIVVEFVNENKNMLNFVKSKSKFGFFNYSGNLTKPQIGDLLKVRFNGEGQGGFYKILTAKKADSNERTNAVKNFEGTIKVVSPQNFGFIEDIFIEPRIIERSKLNNGQQVKGRAILSFNKKKNEWGWKAIEIR
>NZ_LN515532.1|WP_052673111.1|682283_684422_+|AAA-family-ATPase
MNIFDHFQHINLTNDQRQALEKLHAFLESDERIFILQGYAGSGKTTLLKGFVEYLEAQRKKYQLMAPTGRAAKVIREKTNKEATTIHRGIYNFERLDTIEAENELVEEQSYHYVFPINQISEDQNILIIDEASMVSSKESKHELFTFGTGFLLNDLLKYAKISTSKNKLIFVGDPAQLPPVGDNKSLALDPDYFICDLNLSTKTAELSEVVRQNDNLILKNAEKIRNLIFSENRNELKFDYDAESFVQSNPNDFYEHFADTFPTPKIGDGVIIAYSNGQCFHNNIAIREKLFPNQKDLVVGDIILINNNNYHTYGTELFNGDLAQVVEVNPDTISQSAPVMIDKNGKKERIIISLRFKWIKIRLPHFSEDISCLIHYDLLNSVNRDLSIDEMKAVYINFLIRFNEKQKERKEKGLHSYKIGSEEFKNTLKSDPFFNALKIKYGYSITCHKSQGGEWEKVFVDYSGRVSLKTEPLKWCYTATTRARESVICLNAPNFGVFSQLNFSPIGQIGHFPKNAISYLGVKDSPFHNSNAHKCKSLKYWEISEKLENTNFKIENVFSPVNGFLERYFISNDKNEIFQLDGHHNGAGYFTQAFKVTNNNGNPEATELETIFNAPYERHYLIDWNPAEYFLKELHSYVLQACDESNSTLTNVVKTGNYDVTYYFITDSVCSYIQFYYNGKKQLTSAMPKKIGKDDDEKLKLIISNLESYVI
>NZ_LN515532.1|WP_045089247.1|681223_682231_+|hypothetical-protein
MKDRDKLKKLVQIIGDLLKVEGNEWLIDEILKTIGETSPVEEIAKHSVIQNIHEYCVEQKIEKQATEFYNSFPIHEIREQLIQDYKKMEHERRRDDFEGFCLSMFQQIEAVVNFLFESDLVKSKLQIERKSSAFLEWDSEKRVWTRNSNQRLVPFLLMKVNPEKNQNSPRYNPNSKGPFYEMDEKSEDAYFDKDGKPVIDYNPSKKSWGFVNRFRAVLFYYYFKSELKQIDFDKIYKPGYDLYIMRNQNHRESKPTDNQKEIIDTIAGKEGKYFLKFYGFLEDFISQVEQSLYSQNLIKSSSNQTNKPKQKNKFSNTLGDDPKLAKLFEQLKKKD
>NZ_LN515532.1|WP_045089246.1|680030_681221_+|RNA-directed-DNA-polymerase
MKIEQAHIDQIRKQFAELQSKEDLVKLLSDAKNMLYGEECKPVQLKSLTYYANPKLCKKRYQTFTIKKKSGADRTIHAPVKGLKSILRSLNFVLQCVYEPHEAATGFVLEKSIVDNAKKHVGHHYVLNMDLKDFFHTFDRNRVKMGFIYEPFNLNGDKEPLAFLLASLCTHPFEIDGEEKTVLPQGSPTSPTLTNILCKKLDRRLTGLANRFGAAYTRYADDITFSSSHNIYTDEAFNKELKRLIEDDQKLVINPKKTRLQKAGYRQEATGLIVNDKINVRRRYIKQIRMWLYYWEKYGYEKADQIFKRDYIADKGHVKNINAHLVNVLDGKLEFLKMVKGAEDGTYKGLKERFDVLTGMKRKRDNEKIDLESVVNAILNKGLDDGINLYDRFKNS
>NZ_LN515532.1|WP_045089245.1|678581_679586_-|WYL-domain-containing-protein
MSVNKNALIRYQVLDRCFRNTGRMYFWEDLLEECNKALMDFDPNSEGIQRRQLFDDIRFMESEAGWSIPLGRIRHGRKVYYRYEDLSFSISNQLLNDSEAEQIKSALQIFSRFSGTPQFEWVNEMIPMLESKFGLIERKSEIISFESNVDLKGLHYLTPLFNAIINERVLLVRYKDFKSSEPYEITFHPYYLKQYNNRWFAFGLNADNQVPNWNLALDRIESLSETAQKYKQSETDWEEYFFDLVGVTRPENANLQEIVLKFSPEVAPYVITKPIHPSQKHKNDLTGLEVKIKVIPNFELERLILSFGEQVQVISPQDFKERISQRLKSAGRLY
>NZ_LN515532.1|WP_045089254.1|690400_691297_-|endonuclease/exonuclease/phosphatase-family-protein
MKKIYTLLSIIFIVCIIFFAQSCSSDQNRKEVLDINIASFNLRMDTPNDGDNAWPNRKEMVNDLIRYHEMDIIGIQEGFKHQLDDIIEKGDYAYVGVGRDDGADAGEHSAILYKIDRFDVIDKGNFWYSETPDVPGKGWDAICCNRICSWAKFRDIKSGVEFFVFNSHYDHQGKEARKNSSILLLKKIEEIAGDQTVFATGDFNAVPDAEPITIIRDSGKLIDSYLISEQKPYGTVGTTNSFRLDAPMKNRIDYIWVTPDITIKKYGVLNEMQYGRFPSDHFPVLIRAVQEKAKQGKI
>NZ_LN515532.1|WP_045089255.1|691317_693075_-|RagB/SusD-family-nutrient-uptake-outer-membrane-protein
MKKNISNILLIVLLLAGFTSCDLEELPQATASRVAIFESKSGLELYSNSFYEILPTPYDGVFAIDNNSDIVARNGVDSRFMPNALSPTTSGGWSWGNLRNINYFIENAEESSVPEKDHYIGIARFFRAYFYFNMVKRFGDVPWIDRTIDVNDEEKLYAPRDDRFEVMDKVLEDLNYAIANISVNSEPSRTLITKDVARAFKTRVALYEASFRKYHTDYGKQGTANQWYEEVVRAADEIKGYTLVEGPNAYRDLFLQKSPNANEVILAVTLDADLQVFSSRNRRMISPTYGDRPSLTRRFINTYLNADGTPFTSNPNYKTTPFVEEVKNRDGRLRQTIRMGDYHRTENGVPVIAPPNLDQAYTGYQIIKGTYDERFPYDDESRNENAHLIFRYAEVLLNKAEALAELGTMTDAQWTSTIGALRARAGITGPTLTQKPTEADPYMVEFYNNKFTDPVLLEVLRERAVEMITEGLRPDDLIRWHLGDLFATAPMNGMYVPALGEYDLNEDGIMDVCFYQGQVPANTTANVLVDVTEPGVGKRVLSEGDSGEIIWNPGMREWDDKKYLYPIPEADRLRNPNLGQNPGWQ
>NZ_LN515532.1|WP_045090831.1|693087_696354_-|TonB-dependent-receptor
MGYNFENDYIVLSKKALENSTVISETIKAIQQGRTITGKVTDEHGDPIIGATIVVKSNPTQGTVTDIDGTFSLLNAPDNAVLIVTYVGMRSQEVNTAGLSTINIVLETDVELLDEIIVVGYGTTQKVNLTGAVEQVTSEVFENRPITNISQGLVGVIPNLNISLTDGKPTQSPSFNVRGTTSIGQGGSALVLIDGVEGDPRMLNPNDIESISVLKDAASSSIYGARAAFGVVLITTKTASKGRTSVNYSSNFSSRRPTTTPDNITDSYPWAKGFSDAWSNWNDDGRTPTAVNKTLSFSPEYLAEIKRRWEDPSLPRIEINPTTGAYEYYYSTDWYDELYKDSFFAQDHNVSVSGGNDLASYYVSGRYNGEDGLYKYNTDTYSMYNLRARGNVQIFEWLAIDNNTEYSKMSYHQPINVGEGGNIWRNIADEGHPLAPLTNPDGTLTFPAAYTIGDRYLGKSGADLTQKIIKNKTALEADFLDKSLTLRADFTFQNTEYGHDQIRVQVPYSRYEGQIGYTGTNTNDFQERRSTTEYLATNVYANYIKSFNERHNFEFLAGFNYEQSTYNNITMTRNGIVYEDAKDINLALGNNITTSGGYNKWRVAGSFFRVNYNYMQRYLLEVNGRYDGSSRFPSNQQWAFFPSFSAAWRLTEEAFWEVDPNAISNIKFRISYGSLGNGSISPYTFTENFSISQSGRILGDTRPQRTAQPGVIPNTLTWETATTGNIGLDLNMLRNRLSFTGDLYRRWTKDMYTVGPSVPAVFGTGVPKGNYASLETTGWEISLNWMDKFNLDGKPFNYSARASVADSKAIITDYYNPDYLLTDYYIGQTIGEIWGYQVEGLFKSYDEIANSPSQSNIPAHNTRVNHPGDLKFKNLDGDDEIYHGLNRVGDSGDKTIIGNSSPRYVYGLTLGADWNNFFLTTFFQGVGKQQWYPSTESRFWGQYNRPYNQYPRWHESRMFREELQNFDAYLPLLSGYTASSSSRQLGMPNDRYLQNVAYVRLKTLNFGYNLPSSITSMLQANSISVYLSGENIWTWSPLYRLTKDTDVTNVWRAGSQLTGMNSDDTRGDGDGYNYPTLSTFSVGISINF
>NZ_LN515532.1|WP_045089256.1|696833_697799_-|DUF4974-domain-containing-protein
MDEQLSKYLSGELSKDELRVFLERIENDHNLKAEFIRNLNRNAISATVAYSKDREEGIEKYKQFRLRVKQHNRRSIFVKAMRYAAVAILIVASTVFSTLYLYERELGSIMNTLHVPAGQRAQITLEDGTKVWLNAQSTLKYPSHFSSRSRKVEVTGEAFFDVAKKSKPFIVYTNDLELHVLGTEFNVYSYSDGNYIQTDLVEGSLKVINHFNDKNSVLLKSNQKMVYKDSKMTVSPITDPDHILWREGIYSFQNERLIDIIEKLQLYYDVNIIVVDPDIFNIRYTGKFRQRDGIDEILRIFQKIQSFKIVKDKEKNIITLV
>NZ_LN515532.1|WP_045089257.1|697856_698426_-|RNA-polymerase-sigma-70-factor
MYVKNLSEYENQFEEVYLTHFSRMKRFAQQYVIQEEDAENIVQDIFFDIWENRLDFSSFTNLNGYLLSVLRNRCIDFLRKRTVEQKVINNIHEEQNRELKLKLESLIALDNNILSENEITDIVQNAIEQLPERCRQILILNKFEGKKQRTIANELNISIHTVESQMAIAYKKLNEILKDHLFIFVFIFI
>NZ_LN515532.1|WP_045089258.1|698567_699200_-|SagB/ThcOx-family-dehydrogenase
MKKGVLICLIFSLVTNLFAQKSESIVLNPPSKDRGKSVIDAMWHRASPREFDSKKISHQDLSDLLWAANGINRPDEGKRTAPSAVNAQDVDVYVFNETGVYIYNAQKHTLELVVEGDNRKIFAGPQDDSYPPILLLLVSDISRFRIGEDALKLEWAAIDTGIVAQNILLFCTSIDMVGRPRAFMDKDTIKELLKLNDKQYPILNIPVAYK
>NZ_LN515532.1|WP_045089260.1|699948_703194_+|DEAD/DEAH-box-helicase-family-protein
MQIFDNISNIVKDDLIQTISKGSKISIASACFSIYAYEELKEQLQGISELNFIFTSPTFIKEKELKEKREFYIPQLNRERSLYGTEFEIKLRNELSQKAIAKECADWIREKVKFKSNVTNDHMGGFINVVGEERLTYFPINGFTTTDLGCERGNNLVNFVSKIDAPHSEKYISVFKEIWQDNKRLKDVTEQVIENISNVYKENSPEFIYFITLYNIFNEFLEDISEDVLPNSATGFKSSEIWNKLYNFQQDAVLAIINKLEKYNGCILADSVGLGKTFTALAVIKYYENRNKSVLVLCPKKLNDNWITFRSNVTNNPIAKDRLRYDVLYHTDLSRESGISNGLPLDRINWGNYDLVVIDESHNFRNGGQTYGDEDNKRENRYLRLLNKVIRSGVKTKVLMLSATPVNNRFLDLRNQIALAYEGQTDYIDKKLNTEKSIDDIFRFAQAAFNRWSKYDSEQRTTENLLELLDFDFFEVLDSVTIARSRKHIEKYYNTKAIGKFPERLKPISIRPSLTEKEGAINYNEIYELLVQLNLSIYTPSAYIFESKKDNYESMYGRDMGNVFFRQSDRESGIRRLMNINLLKRLESSVHSFRLTVNRIKELIDETIELIENNTKGKVNLEEYVSDVDLELDDQNTDLFVGRKVQIALNDMDTLSWIRDLKQDSDILNTLLYFVDDITPEHDHKLQTLLETLNDKIENPINGNNKKVIIFTAFSDTAEYLYENVSQYIKSEFNLNTALITGSVDGRTTVPRLKNDMNTVLTCFSPISKQRDLLLNGKNRVDSDIDILIATDCISEGQNLQDCDFLINYDIHWNPVRIIQRFGRIDRIGSRNEVIQLVNFWPDLSLDDYINLKGRVETRMKISIMTSTGDDNLISEEEKGDLEYRKKQLQRLMDEVVDLEDMTTGISIMDLGLNEFRLDLLEYMKTNHDVEHAPYGLHAVVSSKGADTPKGVFYVLRNISKSINIDKQNRLHPFYMVYISEDEKIVCNHISPKKTLDLMRYLCRYNTEPILKLCREFNRETQDGRKMGKYSKLLESAISSIIHVKEEKDMMSFFNDKETTSVINKINGLSDFELICFLVVK
>NZ_LN515532.1|WP_045089261.1|703204_703843_+|DUF4391-domain-containing-protein
MLFPESTYIGKRIPKEGFYSKADLNATQKRAFVEDIESIIWRNLISENTLNVSKGEKVAQIDFIEIKLKRKEYNKSILEIIEKAIPRHLVFILTFNSSCKLCINYKEEYQKGNYKILESFTTDWLNESEAELIIQGHNLDRVYENFVYQIAKGRIEKNDGLELSEVIQQSQEVEKIKKRIADLEEKKRKEKQFNMQLRIANEIKRLRSKIEI
>NZ_LN515532.1|WP_045089262.1|703890_705846_+|site-specific-DNA-methyltransferase
MEKLKLETPDLTQQNIDRIAELFPSAITETKDENGKLKRAINFTVLKQLLSDEVVDGEECYEFTWVGKKQSIIEGNRPIRKTLRPAKEESKNWDTTENLYIEGDNLEVLKLLQNSYMNSIKMIYIDPPYNTGNDFIYRDDFKVSREEYEDEIGVYDEDDNRLFKNTETNGRFHSDWCSMMYPRLQLARNLLSDDGVIFISIDDNEVDNLRKICDEVFGEENFVSLITVNRTSEIATNNVVQKSEYCLVYSKMYFNFFVKGKTKYTISRGTVGNAKQTMPVIEFPKGLRCNNIKDGTYQETRKIIGSSENIENIDVIVVENGKLKYPVRLKAKWRSSNDMRNFFINNCQPTVAKISGIIEEIYFEGDRFMPQIKKLTYEKISSLINYNKRGSNDLASLKLNNIFDFPKSVHLIKNLISICVEKEKNSIVLDFYSGSSTTAHAVMQLNAEDGGNRKFIMVQLPEATDEKSEAYKAGYKNICEIGKERIRRAGKKIEEELEAKSNKGDLFDDEEEVKTVDTGFRVLKVDDTNMKDVYYSAGEYSQQMLLNLESNIKEDRNDMDLLYGVLLDWGVPLSLPHTTETIEGKRVHFVNEDNLVACFEESVSEAVVREIAKRKPERVVFRDSSFSSSPEKINVTEIFKTLSPDTSVKVI
>NZ_LN515532.1|WP_045089263.1|705847_708886_+|DEAD/DEAH-box-helicase-family-protein
MKLKFKHQKFQAEATQAVCDVFLGQPFLSETNYLIDQGNVKGQKELYNFTGFKNHKLVPELTDKVILDNIRKIQRSHQIAPSDKLEGKYNLTVEMETGTGKTYVYIKTMLELNKRYGWSKFIVVVPSIAIREGVYKSFQITQEHFTEDYGKKINFFIYNSAQLTEIDRFASDSNINVMIINSQAFNARGKDARRIYMKLDSFRSRRPIDVIAQTNPILIIDEPQSVEGKQTVENLKNFNPLFTLRYSATHKKDRMFNLIYRLDAMEAYNKKLVKKIAVKGISQTGSTGTEGYLYLEGINIYKDKNPTAQLGFETKLKSGLKSTVRTVSVGFNLYEQSGNLEQYKDRYIVSDIDARDNSVTFQNGKKIYAGDVQGAVNEDQLRRIQIRETILSHIEKERQLYSKGIKVLSLFFIDEVAKYKQYDEAGTAFNGQYADIFVEEYNDIIGSLQLQFGEDSYVDYLKSIDTDNTHAGYFSIDKKKGQLIDGKIERKTKESTDVDAYNLIMKDKERLLSFEEPVRFIFSHSALKEGWDNPNVFQICTLKQSTAETRKRQEVGRGLRLCVNKEGDRMDIGYLGGEVHHVNQLTVIASESYESFAKGLQTEFAEVIADRPRKVNAELFEDKLIVTANNEEVIIDEDLATNINFSLIMNGYVSNKGELTDKYYLDKDNDNFIVSEDLVEYKSAIVNILDTIYSPEQIRPDNARSNNVELRLNEEKFNRKEFQELWKSINAKTAYVVDFETDELIRKAIDKINVHLHVSKIFFTVSTGTLESIKSKEILQQGEGFKEGNSKLIEVSTSANAGVKYDLIGKVVEETGLTRKTIVQILTGINKAVFDQFKYNPEEFILKISKLINEEKATAIIQHISYNKLEDSFGTEVFTEPTMKGKLGVNALPANKHLYDYIVFDNSNKEKEFAEKLDNSEEVSVYVKLPRGFYISTPVGKYNPDWAIAFNKGMVKHVYFVAETKGSMSTLDLREIESAKIHCAREHFKTISTDKVKYEVVDNYQRLMEIVK

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

619945 : 666192

Stx2-converting_phage(33.33%)

transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045089201.1\|619945_621109_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_052673099.1\|621550_622936_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	5.0e-40	29.4
WP_045089203.1\|623033_623249_-	hypothetical protein	NA	NA	NA	NA
WP_052673100.1\|623824_624325_-	hypothetical protein	NA	NA	NA	NA
WP_082057333.1\|624340_624934_-	hypothetical protein	NA	NA	NA	NA
WP_045089204.1\|625174_625516_-	hypothetical protein	NA	NA	NA	NA
WP_045089205.1\|625604_626384_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_052673102.1\|626468_626888_+	DUF5320 domain-containing protein	NA	NA	NA	NA
WP_045089206.1\|626910_627147_+	ferrous iron transport protein A	NA	NA	NA	NA
WP_045089207.1\|627147_628872_+	ferrous iron transporter B	NA	NA	NA	NA
WP_052673103.1\|628868_629534_+	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_045089208.1\|629628_629859_+	hypothetical protein	NA	NA	NA	NA
WP_045089209.1\|629919_630531_+	YggS family pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_052673104.1\|630615_631353_+	ZIP family metal transporter	NA	NA	NA	NA
WP_045089211.1\|631389_631989_-	uracil-DNA glycosylase	A0A2H4P750	Pseudomonas_phage	4.8e-08	31.2
WP_052673105.1\|631981_632806_-	Mrp/NBP35 family ATP-binding protein	NA	NA	NA	NA
WP_045089212.1\|632905_633859_-	radical SAM protein	NA	NA	NA	NA
WP_045089213.1\|633884_634754_-	P-loop NTPase	NA	NA	NA	NA
WP_082057334.1\|634750_635644_-	P-loop NTPase	NA	NA	NA	NA
WP_082057335.1\|635604_636483_-	DUF89 family protein	NA	NA	NA	NA
WP_045089215.1\|636487_636826_-	ATPase	NA	NA	NA	NA
WP_045089216.1\|636822_637092_-	DUF5320 domain-containing protein	NA	NA	NA	NA
WP_045089217.1\|637120_637444_-	hypothetical protein	NA	NA	NA	NA
WP_045089218.1\|637751_638168_+	DUF134 domain-containing protein	NA	NA	NA	NA
WP_045090820.1\|638406_640101_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_045089219.1\|640232_640949_+	peroxiredoxin	NA	NA	NA	NA
WP_045089220.1\|641070_641856_+	DUF1080 domain-containing protein	NA	NA	NA	NA
WP_082057428.1\|641997_642087_-\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_082057336.1\|642990_643407_-\|transposase	transposase	NA	NA	NA	NA
WP_045089221.1\|643684_644704_-\|transposase	ISL3 family transposase	NA	NA	NA	NA
WP_045089222.1\|644950_645691_-	ATP-binding protein	NA	NA	NA	NA
WP_082057337.1\|646623_649260_+	substrate-binding domain-containing protein	A0A2K9L0Z8	Tupanvirus	5.4e-11	24.3
WP_045089225.1\|649724_652850_+	TonB-dependent receptor	NA	NA	NA	NA
WP_045089226.1\|652886_654563_+	RagB/SusD family nutrient uptake outer membrane protein	NA	NA	NA	NA
WP_052673106.1\|654638_655745_+	hypothetical protein	NA	NA	NA	NA
WP_082057338.1\|655813_657412_+	DUF4975 domain-containing protein	NA	NA	NA	NA
WP_045089228.1\|657455_659207_+	DUF4980 domain-containing protein	F8WPR5	Bacillus_phage	4.3e-73	36.7
WP_045089229.1\|659270_660431_+	MFS transporter	NA	NA	NA	NA
WP_045089230.1\|660512_662156_+	glycoside hydrolase family 32 protein	F8WPR5	Bacillus_phage	3.9e-52	32.5
WP_045089231.1\|662294_663176_+	carbohydrate kinase	NA	NA	NA	NA
WP_045089232.1\|663464_664205_-	ATP-binding protein	NA	NA	NA	NA
WP_045089233.1\|664235_664490_-	hypothetical protein	NA	NA	NA	NA
WP_045089234.1\|664549_664909_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_052673107.1\|665139_666192_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	4.3e-12	25.3

DBSCAN-SWA_2

1903761 : 1915214

Leptospira_phage(66.67%)

integrase,transposase

attL 1901073:1901085|attR 1904976:1904988

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1901073:1901085	attL	NA	NA	NA	NA
WP_045090106.1\|1903761_1904922_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_045090107.1\|1904967_1905303_+	hypothetical protein	NA	NA	NA	NA
1904976:1904988	attR	NA	NA	NA	NA
WP_045090108.1\|1905333_1905807_-	hypothetical protein	NA	NA	NA	NA
WP_045090109.1\|1906165_1906432_+\|transposase	transposase	NA	NA	NA	NA
WP_045090110.1\|1906509_1907256_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	7.0e-41	40.3
WP_052673197.1\|1907679_1909338_+\|transposase	IS1182 family transposase	Q9MBP7	Staphylococcus_prophage	1.3e-66	30.4
WP_045090111.1\|1909565_1910138_+	hypothetical protein	NA	NA	NA	NA
WP_045090112.1\|1910134_1910482_+	DUF805 domain-containing protein	NA	NA	NA	NA
WP_045090113.1\|1910478_1911702_+	hypothetical protein	NA	NA	NA	NA
WP_045090114.1\|1911711_1913106_+	hypothetical protein	NA	NA	NA	NA
WP_045090115.1\|1913226_1914087_+	hypothetical protein	NA	NA	NA	NA
WP_045090116.1\|1914123_1914390_+\|transposase	transposase	NA	NA	NA	NA
WP_045090110.1\|1914467_1915214_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	7.0e-41	40.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_LN515532

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection