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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP010797 Rhodococcus sp. B7740 chromosome, complete genome 6 crisprs csa3,DinG,DEDDh,WYL,cas4,cas3,RT 0 2 2 0

Results visualization

1. NZ_CP010797
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010797_1 3086368-3086461 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010797_2 3489003-3489089 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010797_3 3974823-3974927 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010797_4 4270147-4270240 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010797_5 4555687-4555784 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010797_6 4599052-4599134 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP010797_5 5.1|4555721|30|NZ_CP010797|CRISPRCasFinder 4555721-4555750 30 NZ_AP022593 Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence 1016303-1016332 7 0.767
NZ_CP010797_5 5.1|4555721|30|NZ_CP010797|CRISPRCasFinder 4555721-4555750 30 NZ_CP020568 Kitasatospora aureofaciens strain DM-1 plasmid unnamed1, complete sequence 73436-73465 7 0.767
NZ_CP010797_6 6.1|4599078|31|NZ_CP010797|CRISPRCasFinder 4599078-4599108 31 NC_023285 Streptomyces sp. F8 plasmid pFRL5, complete sequence 18846-18876 7 0.774
NZ_CP010797_6 6.1|4599078|31|NZ_CP010797|CRISPRCasFinder 4599078-4599108 31 NC_011961 Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence 690167-690197 9 0.71
NZ_CP010797_6 6.1|4599078|31|NZ_CP010797|CRISPRCasFinder 4599078-4599108 31 MN234173 Arthrobacter phage Sporto, complete genome 45845-45875 9 0.71

1. spacer 5.1|4555721|30|NZ_CP010797|CRISPRCasFinder matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 7, identity: 0.767

tgccattcacgcagcggacccccgtgggtg	CRISPR spacer
agccactcgcgcagcggacccccggcggcc	Protospacer
 ****.**.***************  **. 

2. spacer 5.1|4555721|30|NZ_CP010797|CRISPRCasFinder matches to NZ_CP020568 (Kitasatospora aureofaciens strain DM-1 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

tgccattca-cgcagcggacccccgtgggtg	CRISPR spacer
-gtcgtcggccgcagcggacccccgcgggtg	Protospacer
 *.*.*. . ***************.*****

3. spacer 6.1|4599078|31|NZ_CP010797|CRISPRCasFinder matches to NC_023285 (Streptomyces sp. F8 plasmid pFRL5, complete sequence) position: , mismatch: 7, identity: 0.774

ggctcgtcgacctgcttcttcttgtggagat	CRISPR spacer
gcctcgacgaactgcttcttcttgtcggcct	Protospacer
* **** *** ************** *.  *

4. spacer 6.1|4599078|31|NZ_CP010797|CRISPRCasFinder matches to NC_011961 (Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.71

ggctcgtcgacctgcttcttcttgtggagat	CRISPR spacer
agctcgtcgacctgctcgttcttgtaatagc	Protospacer
.***************. *******.. ...

5. spacer 6.1|4599078|31|NZ_CP010797|CRISPRCasFinder matches to MN234173 (Arthrobacter phage Sporto, complete genome) position: , mismatch: 9, identity: 0.71

ggctcgtcgacctgcttcttcttgtggagat	CRISPR spacer
catgattagacctgcttcttcttgcggatat	Protospacer
 ..   * ****************.*** **

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 559679 : 573482 11 Gordonia_phage(42.86%) tail NA
DBSCAN-SWA_2 1243817 : 1252440 7 Indivirus(33.33%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage