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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP010801 Ralstonia mannitolilytica strain SN82F48 plasmid pRMAN01, complete sequence 1 crisprs NA 0 1 1 0
NZ_CP010799 Ralstonia mannitolilytica strain SN82F48 chromosome 1, complete sequence 0 crisprs cas3,csa3,DEDDh,PD-DExK,DinG,WYL 0 0 5 0
NZ_CP010800 Ralstonia mannitolilytica strain SN82F48 chromosome 2, complete sequence 0 crisprs csa3 0 0 1 0

Results visualization

1. NZ_CP010801
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010801_1 21086-21176 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP010801_1 1.1|21109|45|NZ_CP010801|CRISPRCasFinder 21109-21153 45 NZ_CP010801 Ralstonia mannitolilytica strain SN82F48 plasmid pRMAN01, complete sequence 21109-21153 0 1.0

1. spacer 1.1|21109|45|NZ_CP010801|CRISPRCasFinder matches to NZ_CP010801 (Ralstonia mannitolilytica strain SN82F48 plasmid pRMAN01, complete sequence) position: , mismatch: 0, identity: 1.0

gcgctcactcgcttcgtccgaagcgcggtttcgacaccccttcca	CRISPR spacer
gcgctcactcgcttcgtccgaagcgcggtttcgacaccccttcca	Protospacer
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Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 77756 : 110339 26 Salmonella_phage(42.86%) integrase,transposase attL 80841:80855|attR 112599:112613
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP010799
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 327669 : 393697 56 Ralstonia_phage(15.38%) coat,transposase,protease NA
DBSCAN-SWA_2 403676 : 414792 13 Acidithiobacillus_phage(100.0%) tRNA NA
DBSCAN-SWA_3 1579002 : 1609372 29 Streptomyces_phage(33.33%) protease,transposase,tRNA NA
DBSCAN-SWA_4 1853192 : 1861475 8 Bacillus_phage(16.67%) NA NA
DBSCAN-SWA_5 3411840 : 3422068 9 uncultured_Mediterranean_phage(14.29%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
3. NZ_CP010800
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1243177 : 1290994 42 Salmonella_phage(25.0%) transposase,integrase attL 1253883:1253942|attR 1290499:1291888
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage