CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP009546	Burkholderia pseudomallei strain MSHR668 chromosome II, complete sequence	3 crisprs	csa3,cas3,DinG	2	0	2	0
NZ_CP009545	Burkholderia pseudomallei strain MSHR668 chromosome I, complete sequence	1 crisprs	DinG,csa3,DEDDh,cas3,WYL	0	0	7	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP009546_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009546_1

846641-846733

Orphan

Consensus_repeat	Method
GCGCGTCGGCGCGCGCGGCGGCGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP009546_1

>merge|NZ_CP009546|1|846641-846733|CRISPRCasFinder
GCGCGTCGGCGCGCGCGGCGGCGATCAGCCGCTCGCGCTCGGCGGCGGCCTGCGCGAGCGCGTCCTTCAGCGCGTCGTCGCGCGCGGCGGCGA

>NZ_CP009546|1|1|846641-846733|CRISPRCasFinder
GCGCGTCGGCGCGCGCGGCGGCGA	TCAGCCGCTCGCGCTCGGCGGCGGCCTGCGCGAGCGCGTCCTTCA
GCGCGTCGTCGCGCGCGGCGGCGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009546.1\|WP_004529178.1\|842119_843145_-\|alcohol-dehydrogenase-AdhP	unknown	unknown	gnl\|CDD\|176257
NZ_CP009546.1\|WP_011853756.1\|832117_835387_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP009546.1\|WP_004188337.1\|857632_858280_-\|BON-domain-containing-protein	unknown	unknown	gnl\|CDD\|225379
NZ_CP009546.1\|WP_011853765.1\|854308_855487_+\|acetate/propionate-family-kinase	unknown	unknown	gnl\|CDD\|235922
NZ_CP009546.1\|WP_011853761.1\|844192_846205_-\|F0F1-ATP-synthase-subunit-alpha	unknown	unknown	gnl\|CDD\|183987
NZ_CP009546.1\|WP_004524980.1\|852908_854312_+\|bifunctional-enoyl-CoA-hydratase/phosphate-acetyltransferase	unknown	unknown	gnl\|CDD\|236180
NZ_CP009546.1\|WP_011853757.1\|836663_838499_+\|response-regulator	unknown	unknown	gnl\|CDD\|237425
NZ_CP009546.1\|WP_004524995.1\|831047_832121_+\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|235136
NZ_CP009546.1\|WP_004188221.1\|848694_849150_-\|F0F1-ATP-synthase-subunit-epsilon	unknown	unknown	gnl\|CDD\|184057
NZ_CP009546.1\|WP_004524989.1\|840972_841482_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009546.1\|WP_004524993.1\|835389_836514_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223912
NZ_CP009546.1\|WP_004187346.1\|847196_847898_-\|F0F1-ATP-synthase-subunit-A	unknown	unknown	gnl\|CDD\|237383
NZ_CP009546.1\|WP_011853764.1\|851104_852898_+\|polyhydroxyalkanoic-acid-synthase	unknown	unknown	gnl\|CDD\|213656
NZ_CP009546.1\|WP_011853763.1\|849139_850744_-\|F0F1-ATP-synthase-subunit-beta	unknown	unknown	gnl\|CDD\|183615
NZ_CP009546.1\|WP_011853760.1\|843347_844196_-\|F0F1-ATP-synthase-subunit-gamma	unknown	unknown	gnl\|CDD\|376304
NZ_CP009546.1\|WP_004524985.1\|847894_848203_-\|membrane-protein	unknown	unknown	gnl\|CDD\|274462
NZ_CP009546.1\|WP_011853767.1\|856289_857618_-\|1-phosphofructokinase-family-hexose-kinase	unknown	unknown	gnl\|CDD\|238570
NZ_CP009546.1\|WP_004187193.1\|846951_847200_-\|F0F1-ATP-synthase-subunit-C	unknown	unknown	gnl\|CDD\|184067
NZ_CP009546.1\|WP_011853759.1\|841539_842055_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009546.1\|WP_004524990.1\|838866_840432_-\|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|185008

Protein	Function_ID	Function_description	E-value
NZ_CP009546.1\|WP_004529178.1\|842119_843145_-\|alcohol-dehydrogenase-AdhP	gnl\|CDD\|176257	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	0
NZ_CP009546.1\|WP_011853756.1\|832117_835387_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	2.05183e-92
NZ_CP009546.1\|WP_004188337.1\|857632_858280_-\|BON-domain-containing-protein	gnl\|CDD\|225379	COG2823, OsmY, Predicted periplasmic or secreted lipoprotein [General function prediction only].	3.22145e-23
NZ_CP009546.1\|WP_011853765.1\|854308_855487_+\|acetate/propionate-family-kinase	gnl\|CDD\|235922	PRK07058, PRK07058, acetate/propionate family kinase.	0
NZ_CP009546.1\|WP_011853761.1\|844192_846205_-\|F0F1-ATP-synthase-subunit-alpha	gnl\|CDD\|183987	PRK13343, PRK13343, F0F1 ATP synthase subunit alpha; Provisional.	0
NZ_CP009546.1\|WP_004524980.1\|852908_854312_+\|bifunctional-enoyl-CoA-hydratase/phosphate-acetyltransferase	gnl\|CDD\|236180	PRK08190, PRK08190, bifunctional enoyl-CoA hydratase/phosphate acetyltransferase; Validated.	0
NZ_CP009546.1\|WP_011853760.1\|843347_844196_-\|F0F1-ATP-synthase-subunit-gamma	gnl\|CDD\|376304	pfam00231, ATP-synt, ATP synthase.	1.84715e-33
NZ_CP009546.1\|WP_004524995.1\|831047_832121_+\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|235136	PRK03598, PRK03598, putative efflux pump membrane fusion protein; Provisional.	1.83012e-39
NZ_CP009546.1\|WP_004188221.1\|848694_849150_-\|F0F1-ATP-synthase-subunit-epsilon	gnl\|CDD\|184057	PRK13447, PRK13447, F0F1 ATP synthase subunit epsilon; Provisional.	4.44077e-63
NZ_CP009546.1\|WP_004524990.1\|838866_840432_-\|methyl-accepting-chemotaxis-protein	gnl\|CDD\|185008	PRK15048, PRK15048, methyl-accepting chemotaxis protein II; Provisional.	2.47951e-79
NZ_CP009546.1\|WP_004524993.1\|835389_836514_+\|ABC-transporter-permease	gnl\|CDD\|223912	COG0842, COG0842, ABC-type multidrug transport system, permease component [Defense mechanisms].	3.93708e-26
NZ_CP009546.1\|WP_004524985.1\|847894_848203_-\|membrane-protein	gnl\|CDD\|274462	TIGR03165, F1F0_chp_2, F1/F0 ATPase, Methanosarcina type, subunit 2. Members of this protein family are uncharacterized, highly hydrophobic proteins encoded in the middle of apparent F1/F0 ATPase operons. We note, however, that this protein is both broadly and sparsely distributed. It is found in about only about two percent of microbial genomes sequenced, with the first ten examples found coming from the Euryarchaeota, Chlorobia, Betaproteobacteria, Deltaproteobacteria, and Planctomycetes. In most of these species, surrounding operon appears to represent a second F1/F0 ATPase system, and the member proteins belong to subfamilies with the same phylogenetic distribution as the current protein family.	4.12229e-10
NZ_CP009546.1\|WP_011853764.1\|851104_852898_+\|polyhydroxyalkanoic-acid-synthase	gnl\|CDD\|213656	TIGR01838, Poly-beta-hydroxybutyrate_polymerase, poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. [Fatty acid and phospholipid metabolism, Biosynthesis].	3.02027e-178
NZ_CP009546.1\|WP_011853757.1\|836663_838499_+\|response-regulator	gnl\|CDD\|237425	PRK13557, PRK13557, histidine kinase; Provisional.	5.61834e-132
NZ_CP009546.1\|WP_011853767.1\|856289_857618_-\|1-phosphofructokinase-family-hexose-kinase	gnl\|CDD\|238570	cd01164, FruK_PfkB_like, 1-phosphofructokinase (FruK), minor 6-phosphofructokinase (pfkB) and related sugar kinases. FruK plays an important role in the predominant pathway for fructose utilisation.This group also contains tagatose-6-phophate kinase, an enzyme of the tagatose 6-phosphate pathway, which responsible for breakdown of the galactose moiety during lactose metabolism by bacteria such as L. lactis.	2.69071e-109
NZ_CP009546.1\|WP_004187346.1\|847196_847898_-\|F0F1-ATP-synthase-subunit-A	gnl\|CDD\|237383	PRK13421, PRK13421, F0F1 ATP synthase subunit A; Provisional.	1.54059e-122
NZ_CP009546.1\|WP_011853763.1\|849139_850744_-\|F0F1-ATP-synthase-subunit-beta	gnl\|CDD\|183615	PRK12597, PRK12597, F0F1 ATP synthase subunit beta; Provisional.	0
NZ_CP009546.1\|WP_004187193.1\|846951_847200_-\|F0F1-ATP-synthase-subunit-C	gnl\|CDD\|184067	PRK13468, PRK13468, F0F1 ATP synthase subunit C; Provisional.	4.45015e-37

>NZ_CP009546.1|WP_011853761.1|844192_846205_-|F0F1-ATP-synthase-subunit-alpha
MTPTPDAPAAADAATGAGWLARRRGALARVALAPVAQAIGRVERVADGIAFVSGLEDTMLNEVLRFEGGVTGFAHTLDEDLISVVLLDPDAGVRAQTAVARTGAVLEVPAGPQLLGRVVDPLGRPLDGGAPLDAAHTLPIERAAPAIIERDLVSEPLDTGVLIVDALFTIGRGQRELIIGDRATGKTSLAIDAIVNQRHSDVICVYVAIGQRASAVRRVIDAVRRYGAPERCVFVVAPAACAPGLQWIAPFAGFSIAEYFRDRGQHALVVVDDLTKHAATHRELALLTREPPGREAYPGDIFYVHARLLERAAKLSAALGGGSLSALPIAETDAGNLAAYIPTNLISITDGQIVLDSALFAANQRPAVDVGLSVSRVGGKAQHPALRAASGRLRLDYAQFLELEAFTRFGGLTDARLRAQITRGERIRALITQPRFRALRTLDEVVLLKALAAGALDAMSPDLVAPLRERLPAWLDARIAALTPALAPPRDWLADDAALDALAESVGELIERIAADAAHRATAGMPAEDAAGDIGGAFGGEQARGDADRDADHGANREVSREVSPEASREVSREVSREVSHEADRDAAADAARVAGRAPGRAEPDRAAPRAMPDGPPRAQADGDRASASRPRPDARGDAARTAPSPQGGAEVNVNAAANVDAEAEARHKR
>NZ_CP009546.1|WP_011853760.1|843347_844196_-|F0F1-ATP-synthase-subunit-gamma
MSDKLAAIEARTDTARQLQTVIGAMQGVAAARAHEAQQRLPGIRASAATVGAAIGDALSAGARSGETAAGARAAPRARLVVVLCSEQGFVGAYNAQLIEHATRPEPSVSREYMMVGSRGAMLADAGGVPLVWRTPMAARADDVVHLANRITDALYAHLAKRGAQPVSIVHAMPGGAARLEATERRLLPFDYARFDTAPRAQPPLVHLPPATLLAELAQAYVFVELCEAAMLAFAAENEARTRAMIAARESVERALGDLLQAYRIARQDEITADIVELAASGL
>NZ_CP009546.1|WP_004529178.1|842119_843145_-|alcohol-dehydrogenase-AdhP
MAQYMKAAVVHAFGEPLRIEEVPVPTPGAGQILVNVKASGVCHTDLHAADGDWPVKPTLPFIPGHEGVGFVAAVGEGVRHVKEGDRVGVPWLYTACGHCEYCQTGWETLCHEQQNTGYSVNGSYAEYVLADPNYVGHLPSNVAFDEIAPILCAGVTVYKGIRVTDTRPGQWIAISGIGGLGHVAVQYAKAMGLHVVAVDVAPQKLELARKLGAAFVVDASKDDPAAVIQKEIGGVHGVLVTAVSRGAFAQALGMVRRGGTVSLNGLPPGDFPLPIFSTVLNGITVRGSIVGTRRDLQESLDFAAEGLVRAHIHRDKLEHINGVFSALREGKVDGRIVLTGQ
>NZ_CP009546.1|WP_011853759.1|841539_842055_-|hypothetical-protein
MRRAMRGAGRASPSRARRYENVSKEPNTHREAGAPVHRYRLQVRNMNGECRTYELRLSSLDDGYTLEIDEWLNFPDTHLGDVTPVHVSRPVQFAVPAHEFYRRRRAFRTERIESVAAALRAGEVVRMRDSPDEYPGGHAGNPWVNWIRADLRANPGGRPPPVGDDMQDLIH
>NZ_CP009546.1|WP_004524989.1|840972_841482_+|hypothetical-protein
MRRIYFLLPDADTARAIVDELLLKRIEWRHIHVVANDRVPLENLPEASIAQSSDLLPALARGTAAGGVTGALAGLAAIAFPPAGLTIAGGAVVAFAIAGAGFGAWVGTMIGVSVPNTRLKHFEDAVDNGELLMMIDVHRDRVEEIEALVKQHHPNAHLEGTDPTIPAFP
>NZ_CP009546.1|WP_004524990.1|838866_840432_-|methyl-accepting-chemotaxis-protein
MPTLSFRQKLWLPLVISLIALLLVSISSAWLSYQTRMEERRNDLTNVAHVGLSIVREYAALAQRGVLTDAQARKEALERLRSVRYGSDGYFIVIDSSPRMIMHPIKPDTVGKDLRHVADADGRHHYLTFASVAQSPQGGFVDYVFAHPNAHPAKAVDKLGYVIRYAPWDWIISTGAYIDDIQAAFAKSLCLSAGVFALLAALLALSVVYTNRGIERMIGGDPRIAAHMAGVIASGDLATPFATRREDRSSLMFAISQMRDALANAVAQIRASAGYVATTAGEIADSNMDLSSHTECQATALQQAASSMQRLTERVRDTADRARAASELAGSAARITDRGGDMVVRVVAAMNDIRAESRKMVDIIGVIEGIAFQTNILALNAAVEAARAGNEGRGFAVVASEVRVLAQRSASAAKDIRALIGRAAERVGNGAELVEATGATIGEAQHAICRVTGIVQDIAAAATDQSQGLEQINAAVSQMDSVTRRNATLVEHAAIAAQSLNEQSRCLQDAVAAFRTEALGC
>NZ_CP009546.1|WP_011853757.1|836663_838499_+|response-regulator
MHVEVFAQHPSCPGWHGEMARRIRAFDWSATELGPLERWPASLAAAVRTVLASPVPLVMLWGAAGYMLYNDAYAAFAGGRHPYLLGQPVELGWPEVADFNRNVMRTCLAGGALSYRDKALVLLRNGRPEEVWMDLYYSPLAGDDGAPAGVLAVVVETTERVLAARHRDRAKAALHETNAELRRLTETLEQRVADAITERASIEEQLRQAQKMEAIGSLTGGIAHDFNNVLQVVSSNLQMLSAELGEDARAQRRIASAANAVARGAQLASHLLAFARRQPLAPAVLEPRGLIDGMREMLHRALGESVHVDADLRDDVWNVLADRHQFENALLNLAINARDAMRGEGTLKITACNIVLEAGRHARRNGLPPGEYVAFDIADNGVGMTPDILERVFEPFFTTKPDGQGTGLGLSMVFGFVKQSGGHTSIESAPGRGTTVRLLLPRCREAPAGEPAAQRRLPAEGGRETILVVEDDADVRLAVVDMLAQLGYKVITASDGEAGLLALESGAPIDLLFTDVIMPGRIKGGELARRAAQRVPPVPVLFTSGYTRDEIFHAGRLDPGVMLLGKPYRRDELAHKVRSVLDAHASARRAHGARHAQADPRAKTAAARVQR
>NZ_CP009546.1|WP_004524993.1|835389_836514_+|ABC-transporter-permease
MRRLAIVYRLGVKELWSLVRDPILLVLIAYTFTASIYSAATARPDTLHMAPIAIIDEDASPLSARIASAFFPPQFALPRMVTLAEADRGMDAGDFTFALDIPPNFQRDVLAGRPAQIQLNVDATRMSQAFTGNGYVQQIVSGEIDDFARRYRANTAPPVDIAMHMRFNPNLDQTWFGSLMEVINNVTLLSMVLTGAALIREREHGTIEHLLVMPVTPGEIMLAKVWSMGLVVACAAAFSLAFVVRGALHVPIEGSVALFVIGMAIHLFATTSMGIFLATLVRSMPQFGMLLVLVLLPLQLLSGSLTPRESMPFAVQNIMLAAPTTHFVEIGQAILYRGAGIETVWRQFLILAVIGTALFLLSLKRFRKTIGQMA
>NZ_CP009546.1|WP_011853756.1|832117_835387_+|ATP-binding-cassette-domain-containing-protein
MSAPSVVRFSDVSLRYGKTVALERITLEIPAGLTIGLIGPDGVGKSSLLALAAGARALQTGAVDALGGDMRSRRHRERVCRRIAYMPQGLGKNLYPTLSVEENLQFFARLFGHDADERRRRIDALTRSTGLFAFLSRPAGKLSGGMKQKLGLCCALIHDPDLLILDEPTTGVDPLARAQFWDLIARIRSERPAMSVIVATAYMDEAQRFDWLIAMDAGRVLATGAPAELLARTGCDSLEAAFIALLPEDERRGHKPVTLEPLRADAQTGTAIEARGLTMRFGDFTAVDHVSFRIRRGEIFGFLGSNGCGKSTTMKMLTGLLPATEGTAQLFGKTVDPKDINTRRRVGYMSQAFSLYSELTVRQNLVLHARLFGVPAAEIDARVDEMARRFGLADIYDMLPDSLPLGMRQRLSLAVAMVHKPELLILDEPTSGVDPVARDSFWQLMIDLARRDRVTIFISTHFMNEAQRCDRISLMHAGRVLASDAPAALVRARGAATLEEAFIGYLVDASAQDAQEAQGGAGERPGSSERAAGESLAGRGAATDGDADGAHARPAAYANGAAQHRAPDADAAGTDVAAETGARDDARTAHAAGHSAGNDVRATVGSEVGPEVGPEVGSEAGPEAGLAASAESGSERGVAHGAERAREPAADITAAAGAAIDVEPGASAESATAAVAPARHAESAATSPRAGNAPAGTPFAAAPPSHAAPAEPPHRAFSAQRALSYMWREMLELRRDPVRATLALIGSLVLMCVIGIGISLDVEDLTYAVLDRDQTELSHDYALNLSGSRYFVERPPIADYAALDRRMRDGELSLAIEIPPNFARDVERGAPAQIGMWIDGAMPQRAETIRGYAIGMHTMWLADKARHRLGVTLAPRAEVVTRYRYNPDVKSLPAMIPAVMPLLLLMLPAMLTALAVVRERELGSILNLYVTPVTRTEFLIGKQVPYVVLAMLNFLLMTMLARIAFDVPVKGSFMTLLLAVLIFNVVATGIGLLASTFTRSQVAAIVMTIIGTMIPTVQFAGLLTPLSSLEGTGRLIGLVYPATYMLSISRGVFNKALSLHDLYSQFWPLAASVPVILGATILLLKKQER
>NZ_CP009546.1|WP_004524995.1|831047_832121_+|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit
MIQVTRKQIVAAAAVVVVALGAYYGWTLLRHQGPGDGFASGNGRIEATEIDVATKLPGRIDAILVDEGDFVKAGQPLANMQIQVLRAQYDEATAQRQRALNTAAGVQSQVAQRKSDKAAAQAMVVLRESELDAAERRLARSQTLSREGASSLQELDDDRARARSAQAAVSAAAAQVAAAQAAIEATEAQLVAAHSAVTAADATVARVQADIDDSQLASPRDGRVQYRVAQPGEVLPAGGKVLNLVDLSDVYMTFFLPETVVGRVALGADARIILDAAPNYVIPATVSFVSSTAQFTPKTVETANERQKLMFRVKARIDRELLQKHLKLVKTGLPGVAWVRVDPSKPWPAQLMVKVPQ
>NZ_CP009546.1|WP_004187193.1|846951_847200_-|F0F1-ATP-synthase-subunit-C
MNNLIEVVSIAAAALAVSFGAIGPALAEGRAVGAAMDAIARQPDASGTVSRTLFVGLAMIETMAIYCLVVALLLLFANPFVK
>NZ_CP009546.1|WP_004187346.1|847196_847898_-|F0F1-ATP-synthase-subunit-A
MNASPLSTVPLFSVGPVGISAPVLATWAIMAVLVALALVARRRLSVDAPSRLQSVLELFVATVDAQIADTMQTPPARYRALIGTIFVLVFCANGASLVPGVEPPTAHLETDAALALVVLAATLYYGVRARGVRGYLATFAEPTWVMIPLNVVEQLTRTFSLIVRLFGNVMSGVFVIGIVLSLAGLFVPIPLMALDLLTGTVQAYIFMVLSMVFIGAAVSGDETSAPRRGQENT
>NZ_CP009546.1|WP_004524985.1|847894_848203_-|membrane-protein
MIEMWETARASFDGIAAAIGLALGFVAGACHFVSLGWNSRLFVAGRAGVALALQLARVALAVAVLVVLARAGFGMLVAGSAGFFAARAIAVRRAAALTGARR
>NZ_CP009546.1|WP_004188221.1|848694_849150_-|F0F1-ATP-synthase-subunit-epsilon
MGAELRVTIATPARVCVDDLPIVSLRAEDASGAFGIRAGHVDFVTLLRASVVRWRTADGATHYAALDGGVLRVTRGARIEIACRDAVLGESLAELEAVVRGVRATQLDEKRRARVDETRLHAQAVRRLLTYLRPEHAKDGVHAPLKPETLE
>NZ_CP009546.1|WP_011853763.1|849139_850744_-|F0F1-ATP-synthase-subunit-beta
MADPQATNGTGAACAERDASDVGDVSDVGDARDEGAGRVVAVRGAVVDVAFDGGALPALNEALTIPVDGAAPILAEVHAHLSDAAVRALALGPTGGLRRGAAVRATGGPIRVPVGDAVLGRLLSVTGAPGDDGAALAADVERRPIHRGAPPLAEQKSANALFATGIKVIDLLAPLAQGGKAAMFGGAGVGKTVLVMELIHAMVERYRGISVFAGIGERSREGHEMLLDMRGSGVLGRTVLVYGQMNEPPGARWRVPLTALAIAEYFRDERAQNVLLLMDNVFRFVQAGAEVSGLLGRLPSRVGYQPTLASEVAALQERIASVEGAAVTAIEAVYVPADDFTDPAVTAIAAHVDSMVVLSRAMAAEGMYPAIDPVASSSILLDPLVVGEAHVEVAIEVRRVIEHYRELQDVIALLGIDELGADDRRLVGRARRLQRFLTQPFAVTEAFTGQAGASVEIADTIAGCRAILRGDCDDWRESSLYMVGTLDDARRKEAAAREADARREAAAAASGAGPGTTSDPASGSAEPQGARHGR
>NZ_CP009546.1|WP_011853764.1|851104_852898_+|polyhydroxyalkanoic-acid-synthase
MDTRHAPESGAPDAPLPVHPPASYAPESPYRIFDLAKEASVAKLTSGLSPASLQLALADWLIHLAAAPGKRAELATLALRHAALLGQYLLEAATGRTPAAPAQPSPGDRRFRAGAWQLEPYRFWHQSFLLAEQWWRAATRDVPGVSPHHEDVVAFSARQMLDTFAPANYVATNPEIAQRTALTGGANLAQGVWNYLDDVRRLITKQPPAGAEQFELGRNLATTPGRVVFRNHLIELLQYSPTTPDVYAQPVLIVPAWIMKYYILDLSAHNSLIRYLVGEGHTVFCISWRNVDASDRDLSLDDYRKLGVMDALDTIGAIVPGEKIHATGYCLGGTLLSIAAAAMANTGDDRLASITLLAAQTDFAEPGELQLFIDDSEIHFLESMMWERGYLGAHQMAGSFQLLMSNDLIWSRVIHDYLLGERTPMIDLMAWNADSTRMPYRMHSEYLRHLFLDNDLATNRYVIDGQTVSVHNIRAPFFVVGTEHDHIAPWRSVYKIHYLSGSDVTFALTAGGHNAGIVSEPGHAKRHYRMKMTAAAAPSISPDEWLAGATDFEGSWWPAWHAWLARHSSPQRVAPPPLGKPGAHTLDDAPGTYVFQK
>NZ_CP009546.1|WP_004524980.1|852908_854312_+|bifunctional-enoyl-CoA-hydratase/phosphate-acetyltransferase
MDREILQNRPFDSLAIGDSASLVRTASRDDIDLFAAMSGDVNPAHLDAAFAAHDLFGHVVVHGMWTGALVSAVLGTKLPGPGTIYLDQTLEFRHPVAPGDTITATVTVAEKRPEKRIVLLDTRCTNQDGHVVLRGTATVIAPDTPITWERVPGPEVAVRRHDRYETFVRDAREQPPLRTAIVHPCSPDALRAAIDARDANLIEPILIGPQAKIRAIADAAGVDLAGVPIEAVEHSHAAAARAVEMGGAGEVAALMKGSLHTDELLAAVIGPASRLRTERRISHVYAMDVPAYPKPLLITDAAINIAPTLEQKRDICQNAVDLLHVLGVERPRVAVLAAVETVNPKMPSTLDAAALTVMAARGQIAGAIVDGPLAFDNAVSAVAAMSKGIASPVAGDADVLLVPDLEAGNMLAKQLMYFAGADAAGLVLGARLPIILTSRADSLRVRIASAALAKLVAERTRAGALAS
>NZ_CP009546.1|WP_011853765.1|854308_855487_+|acetate/propionate-family-kinase
MSEPLLLTFNAGSSTLKIGLYSVANGEPAPLGRGKIDFNRAPLQFEYANGGEAHAVPLAAPVTDDLHAVLDEALGWIDAHLSVHELVSVGHRVVHGGDTFDGPVRIDERTLDAIAALVPLAPLHQPQSVRLIRALRHVRPHLPQVASFDTAFHRTQSDLVRRFALPRALFDAGIKRYGFHGLSYRYVAGRLRERHPSIARGKIVAAHLGSGASLCALDAGVSRDTSMGFSTLDGIPMATRCGALDAGVVLHLQKTLGRTLDDVEQMLYHRSGLLGVSGVSGDARALLADPSAGARDALELFAFRIAGETARLAATLGGLDALVFTAGIGEHQPQTRAAVCERLRWLGVELDAHANARNAETVSRDGSRVAVLVVPTDEEQVIARDAASVLHA
>NZ_CP009546.1|WP_011853767.1|856289_857618_-|1-phosphofructokinase-family-hexose-kinase
MRGACASRAMFDTGGKRQAASGKRQAASGKRQAASGKRQAASGKRQAASGKRQAASSKQQAASSKQQAASSKQQAASSSRPAPVLMVRRRIERKHCGACPPRSTREPRTRASRCVVFPSRIPTLKPNVTMPEIVTLTPNPAIDVATCVERVTDTRKLRCGPARRDPGGGGINVARVLTRLGADCSAVYLAGGGTGLALRGLLADEGVRAHGIDIAGETRENFSVLETSTGREFRFVLPGPALAAHEWPRCVEALGRLADASRYLVMSGSLPPGMPDDCYARLARRASARGVRTVVDTSGPALAAALDAGVYLVKPSLGELRALTGLPLEDDGARLAAARAIVAGGRAQIVALTLGDAGALVVSRDDAVRLPGVKVAVRSAIGAGDSFVAGLVAALNRGANVADAARHALAAASASLLSTGTALGTKEDIARIYRELPGTIDA
>NZ_CP009546.1|WP_004188337.1|857632_858280_-|BON-domain-containing-protein
MKSDAALKQDVEQELYWDPSLDARQIDVSVRDRIVTLRGFVPSWAQKYAAQKAAQRVAGARALVLELKVLPSEAPRDDEVLAAAIVSALAWQEGLAGQEIHVDVDEGCVTLTGEVAFGYQRQAAETVVSRMRGVIGVVNRIDVRSRDAGATVRERVADALARRAQREAAHIEVDERDGIVTLTGTVDSLIERRAACGAAWSVKGVREVIDHLSVA

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Crispr_ID: NZ_CP009546_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009546_2

1027822-1027968

Orphan

Consensus_repeat	Method
CACGACAGCACGACAGCACGACAGCAC	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP009546_2

>merge|NZ_CP009546|2|1027822-1027968|CRISPRCasFinder
CACGAACACACGAACACGCGACCGCACGCCCACGCGCACACCCGACCACGCAATCGCGCAATCGAGCAATCGAGCAATCACACGACAGCACGACAGCACGACAGCACGACAGCACGACAGCACGACAGCACGACAGCACGACAGCAC

>NZ_CP009546|2|2|1027822-1027968|CRISPRCasFinder
CACGAACACACGAACACGCGACCGCAC	GCCCACGCGCACACCCGACCACGCAATCGCGCAATCGAGCAATCG
AGCAATCACACGACAGCACGACAGCAC	GACAGCACGACAGCACGACAG
CACGACAGCACGACAGCACGACAGCAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009546.1\|WP_009941165.1\|1017455_1017773_+\|chorismate-lyase	unknown	unknown	gnl\|CDD\|113128
NZ_CP009546.1\|WP_004200624.1\|1040044_1040224_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009546.1\|WP_004190485.1\|1028269_1029193_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182990
NZ_CP009546.1\|WP_011853866.1\|1020553_1021891_-\|D-serine-ammonia-lyase	unknown	unknown	gnl\|CDD\|235096
NZ_CP009546.1\|WP_011853874.1\|1033087_1034491_+\|indoleacetamide-hydrolase	unknown	unknown	gnl\|CDD\|236030
NZ_CP009546.1\|WP_004524788.1\|1026269_1027604_+\|MHS-family-MFS-transporter	unknown	unknown	gnl\|CDD\|340927
NZ_CP009546.1\|WP_011853862.1\|1017216_1017519_+\|chorismate-lyase	unknown	unknown	gnl\|CDD\|225703
NZ_CP009546.1\|WP_004190287.1\|1030576_1031425_-\|fumarylacetoacetate-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|223257
NZ_CP009546.1\|WP_162486803.1\|1038651_1039545_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009546.1\|WP_004266659.1\|1034676_1035228_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009546.1\|WP_038741703.1\|1019412_1020327_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182990
NZ_CP009546.1\|WP_144411164.1\|1023751_1025161_+\|DNA-repair-protein	unknown	unknown	unknown
NZ_CP009546.1\|WP_004190530.1\|1039651_1039942_-\|H-NS-histone-family-protein	unknown	unknown	gnl\|CDD\|376390
NZ_CP009546.1\|WP_004533130.1\|1029257_1030400_+\|alpha-hydroxy-acid-oxidizing-protein	unknown	unknown	gnl\|CDD\|376451
NZ_CP009546.1\|WP_038747265.1\|1031963_1032788_+\|IclR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224332
NZ_CP009546.1\|WP_004552209.1\|1035746_1038110_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|131764
NZ_CP009546.1\|WP_011853867.1\|1021987_1022929_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182990
NZ_CP009546.1\|WP_004524799.1\|1018526_1019231_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187602
NZ_CP009546.1\|WP_076866351.1\|1015450_1015636_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009546.1\|WP_011853861.1\|1015899_1017144_+\|flavin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|236046

Protein	Function_ID	Function_description	E-value
NZ_CP009546.1\|WP_004533130.1\|1029257_1030400_+\|alpha-hydroxy-acid-oxidizing-protein	gnl\|CDD\|376451	pfam01070, FMN_dh, FMN-dependent dehydrogenase.	3.69274e-171
NZ_CP009546.1\|WP_004190485.1\|1028269_1029193_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|182990	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional.	6.62225e-57
NZ_CP009546.1\|WP_011853866.1\|1020553_1021891_-\|D-serine-ammonia-lyase	gnl\|CDD\|235096	PRK02991, PRK02991, D-serine dehydratase; Provisional.	0
NZ_CP009546.1\|WP_011853874.1\|1033087_1034491_+\|indoleacetamide-hydrolase	gnl\|CDD\|236030	PRK07488, PRK07488, indoleacetamide hydrolase.	0
NZ_CP009546.1\|WP_038741703.1\|1019412_1020327_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|182990	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional.	8.19785e-89
NZ_CP009546.1\|WP_011853862.1\|1017216_1017519_+\|chorismate-lyase	gnl\|CDD\|225703	COG3161, UbiC, 4-hydroxybenzoate synthetase (chorismate lyase) [Coenzyme metabolism].	1.59611e-07
NZ_CP009546.1\|WP_004190287.1\|1030576_1031425_-\|fumarylacetoacetate-hydrolase-family-protein	gnl\|CDD\|223257	COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism].	1.00291e-102
NZ_CP009546.1\|WP_004524788.1\|1026269_1027604_+\|MHS-family-MFS-transporter	gnl\|CDD\|340927	cd17369, MFS_ShiA_like, Shikimate transporter and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Escherichia coli shikimate transporter (ShiA), inner membrane metabolite transport protein YhjE, and other putative metabolite transporters. ShiA is involved in the uptake of shikimate, an aromatic compound involved in siderophore biosynthesis. It has been suggested that YhjE may mediate the uptake of osmoprotectants. The ShiA-like subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	4.12376e-146
NZ_CP009546.1\|WP_009941165.1\|1017455_1017773_+\|chorismate-lyase	gnl\|CDD\|113128	pfam04345, Chor_lyase, Chorismate lyase. Chorismate lyase catalyzes the first step in ubiquinone synthesis, i.e. the removal of pyruvate from chorismate, to yield 4-hydroxybenzoate.	0.000875608
NZ_CP009546.1\|WP_004190530.1\|1039651_1039942_-\|H-NS-histone-family-protein	gnl\|CDD\|376390	pfam00816, Histone_HNS, H-NS histone family.	5.135e-20
NZ_CP009546.1\|WP_038747265.1\|1031963_1032788_+\|IclR-family-transcriptional-regulator	gnl\|CDD\|224332	COG1414, IclR, Transcriptional regulator [Transcription].	3.57648e-43
NZ_CP009546.1\|WP_004552209.1\|1035746_1038110_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|131764	TIGR02717, Uncharacterized_protein_MJ0590, acetyl coenzyme A synthetase (ADP forming), alpha domain. Although technically reversible, it is believed that this group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which it has been characterized. In most species this protein exists as a fused alpha-beta domain polypeptide. In Pyrococcus and related species, however the domains exist as separate polypeptides. This model represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. In reference, one of these (along with its beta-domain partner) was characterized as ACS-II showing specificity for phenylacetyl-CoA. This model has been constructed to exclude these non-ACS-I paralogs. This may result in new, authentic ACS-I sequences falling below the trusted cutoff.	3.34414e-90
NZ_CP009546.1\|WP_011853867.1\|1021987_1022929_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|182990	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional.	3.4579e-74
NZ_CP009546.1\|WP_004524799.1\|1018526_1019231_-\|SDR-family-oxidoreductase	gnl\|CDD\|187602	cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR. This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs.	4.21794e-72
NZ_CP009546.1\|WP_011853861.1\|1015899_1017144_+\|flavin-dependent-oxidoreductase	gnl\|CDD\|236046	PRK07538, PRK07538, hypothetical protein; Provisional.	0

>NZ_CP009546.1|WP_004524788.1|1026269_1027604_+|MHS-family-MFS-transporter
MPTPTPGTPRPPRTPQPVRAALAAFIGTTVEFYDYYTYATAAALVLGDVFFPSDNPFVSTMASFATFFVGFVARPLSGAVFGHLGDRIGRKKMLVLTMFLMGAATTGIGLLPGYATIGVWAPVLLVLLRILQGIAVGGEWGGAVLMASEHASAGRRTLFASFPQMGSPAGLILSLLAFRYVTSLDHARFVAWGWRLPFLASFVLLLIGVAVRLGVNESPEFERVRDSHAVARFPVAEVLRTAWYPIVLAAAATTIGSAGFFFTNTFMISYVTTYLGMSKSFILDCLFAVTLIQLLSQPVSALLAQRFGETRFLVCAALLSMLTPYPMFVLVRTHDPVAIVAGIAFAVVALSAVYAVIAGFMSAAFPTRVRYSGISIAYQLCALVAGGTTPLVGTMIAQRYRGEWLPLALFFSLLAFVSLVGIVGLGRYRRNLHAVAPRAWAVNP
>NZ_CP009546.1|WP_144411164.1|1023751_1025161_+|DNA-repair-protein
MVVSPENLSLNYLSNSDILVTLEKAGVKLDIFYGLLWKHVFAVELLKRRCHLTNEEKTRSWIAGFIPALKRKDQAKERAFNYLSTWGDTFWQETEYRVKEVTEKLEGEITSKLGAEIGALKADVNGSLKRMDERKTEVVNKAQTVINSIQIKALADVIALMNEEIFTDPQQKYYLVIDRLDENWVDDDLRYRLIRALIESVKTFRSVVNVKIIVALRQDLVRTVFERTRDAGFQEEKYAALFLPLRWEKNLLIKMLNERIIRLVREQYTLSPIELVDLFPKTIGKEAFVDYLLERTHYRPRDAISFINECLKRSEGKGQVTVQTVRNAEIEYSTTRMNALSFEWTSHFPNFLEYLPLIEQMPSKFRLSQIHKDRINEFAIADCFDGEHAVDPVIRAGFAFINNDNTHAFRVELIKALYSIGVVGLKLASFNSQIWAYMDINAPGDGQIRANSEVFIHPMAWARLGVKPN
>NZ_CP009546.1|WP_011853867.1|1021987_1022929_+|LysR-family-transcriptional-regulator
MDIKLDTPLLGALRCFEAAGRLGSFTKAADALHLTQSAISQQIRQLEARLGYPLFVRHARGLALTPKGGALHEATVAAFASLGRTLRQLSAPDAPLQVSCLPSFALQWLMPRLTEFHRLHPQTPVRLRAEFHAIDRETMSADDIDIAIRWDPFSYGALHVEPLFDESLVAAAAPAYLDRHPPRATAKWVSSVVPLHDASAWPEAPRYVEWRMWLDAVVPGYAGALRGPEFNLASLAIAAAVAGQGVVVCREALVDDEIARGRLVNVFARRVPAPAQYKAICARPEDARVKAFVGWLRAESDSYAARRQTQARP
>NZ_CP009546.1|WP_011853866.1|1020553_1021891_-|D-serine-ammonia-lyase
MPVGRSLSLDPNLLAQLQSHSPTLWLNPHQGMPLPDFAPTAADLADADARLRRCAGLLAELFAELRLSGGLIASPLQPAEPLKRAARAGHAQAGAWYVKRDDALPVAGSIKARGGFHEVLALAESIAERHGLAGADTDRRALASGAARARFARHTVMVGSTGNLGLSIGMLASALGFRTVVHMSADAKAWKKARLRTRGVEVVEHAGDYAKAVDAGRRQAAGMPCCHFVDDEGSRMLFLGYATAAAELAAQLAQAGRPVDARHPLFVHLPCGVGGAPGGIVYGLKALYGEHVHAFVAEPTASPCVLVQLAGDAAHPRSVYDIGLDNRTEADGLAVAQASPLAAALLRAQAAGAFTVDDRQLFAHLLDARERLGIDLEPSAAAAFGGPAWIAGSDAGRAYLRGRGIDPDAATHVIWATGGSLVPAQEHRRFQAHARAQRQVGGAGA
>NZ_CP009546.1|WP_038741703.1|1019412_1020327_+|LysR-family-transcriptional-regulator
MPARKPGRLPPLNALRAFEVSARHLNFRAAADEIGVTQGAVAQQVRHLEDALGVALFERLPRGLALTADGLAYFADVRRALNLIGDATDRLAKRRANVTISTTPSFASRWLIPRLASFGDEHPGVDLRVIADSQFATFQGDGVDLAIRYGKPPFGKGLVTRLLFPVDIYAVCSPALLATPGALARARDLAGHALLHDAHDLWPEFLAALPERVATDPAKGPRFNQSSLAIDAAIAGHGVALASDQLVARDIEAGRLRRLFDFALPLSVGYYIVRPSEPRRPGDIAQTEAWLIRQAQLDARCDGA
>NZ_CP009546.1|WP_004524799.1|1018526_1019231_-|SDR-family-oxidoreductase
MAVEKVALITAAGKGMGAAIARELASAGYRVALMSPSGSAVALAGELDGLGLRGSVTEEADLDRLVRETLARYGRIDAVVNNTGHPPKGELLSIADASWHDALDLILLNVARLMRRVTPVFQAQGGGAAVNISSFAAVAPEQPMPVSSVLRAALGAWTRLYAERYAAENIRMNAVLPGFVDSWPETPGIVARIPAGRFGRTREIAKTVAFLLSDGAGYVTGQSIRVDGGIVRAM
>NZ_CP009546.1|WP_009941165.1|1017455_1017773_+|chorismate-lyase
MRDRAQHRVGAHALETQWKPLTGYGSLPLGHILYDDPAIVRAPFECALLMPDDPLDAISRRYARAAAPPRARRSAFVRNGATLVVSECFLPQFWSGFAQARLAGA
>NZ_CP009546.1|WP_011853862.1|1017216_1017519_+|chorismate-lyase
MNASSGWSRQPPASLSEREIHWLFAPGSPTERLSALGEYSLEPVDQRHAAACAADASLLGVEPDSPIWVREVVMRLDAQPCVTARSIASARTRSKRSGSR
>NZ_CP009546.1|WP_011853861.1|1015899_1017144_+|flavin-dependent-oxidoreductase
MKKIVIVGAGIAGLTLALTLHSRGLAVRVFEAAPRIEPLGVGLNIQPYAVRVLHELGLLETLARQSITTKEMVFFTRYGQRIYSLPLGKYGGHNFPQLSIHRGILQLALLKAATERLGPDFLVNGHSFVSCTQNRRSVNAVFSGAPGGADLVSVECDALIGADGVHSKVYRSLYPDGPRTKGNGVLMWRGVTIAPPFLTGASMVRMGVPSHGKLVVYPIRSDVNAQGDQLINWVAELDEAVYRAGANAAPGSGKDFIRFFASRTFDWLDVPALLERAASPIIAMPMADRDPLPRWQTGRVTLIGDAAHPMVPVGSNGAGQAMLDAHSLGTRLAETADIEAALATYEHERRAYTSNIVLGDRLDLPDRLIQEVDCRSHGEPFSDIGEIIASDEASRLALPDYHGRPLAPTQAGGA
>NZ_CP009546.1|WP_076866351.1|1015450_1015636_+|hypothetical-protein
MEGEGGFGTHRARGGDVRARRSSQCRPRARGRQGGVGWRGAPPVFSSVFRARRAFDSSPAA
>NZ_CP009546.1|WP_004190485.1|1028269_1029193_+|LysR-family-transcriptional-regulator
MNPSDLRDLRLPSLDGLLAFVAAARHGTFERAAEELCVTGSAVAKRVAALEQLLGVQLLVRSGKALTLTAAGNEYLHQVHAPLHLLAAVPLHRRNAGKTERLRICAPPTFARQILVARLDAFTLAHPGVELEVMLASPFPDAPPTGADLWIRGGGPIVSGATVLMVDALTPLAAPSLVERFAPLRRPADLAALPLLCTPLEPWTPWFRVAGLDWPEPANGPKLLDLGLLLEAAVSGQGVALGSPALARPWLAAGALVPLFPRIVRPAAPYYLMPYAPRAAAGAFAAWLADVCERAVRDGAEFLSRHG
>NZ_CP009546.1|WP_004533130.1|1029257_1030400_+|alpha-hydroxy-acid-oxidizing-protein
MSVPITCIEDLRVLAKKRIPRMFYDYVDTGSYTESTYRANEADFRKIRLRQRVGVDISNRNLRTTMAGQDVAMPVALAPTGLVGMMRADGEILAARAARHFGVPFTLSTMSICSIEDIVAHVGGPFWFQLYMMRDRAFIERLIERASAAGCPALVLTMDLQIAGQRHKDVKNGLSAPPRITLPNLLDMMRKPGWCLGMARTRRRHFGNIVGHVKGVTDMWSLDSWTREQFDPTIGWRDAEWVRRRWNGKLIVKGVLDADDALRAADAGADAIVVSNHGGRQLDGAMSSVEALPAIVEAAGKRVEVWLDGGVRTGQDVLKAVALGARGTMIGRAFLYGVAALGEQGARRALELIARELDTTMALCGCTDIRSVNADVLARR
>NZ_CP009546.1|WP_004190287.1|1030576_1031425_-|fumarylacetoacetate-hydrolase-family-protein
MKLLRYGPVGQEKPGLLDADGRIRDLSSLIDDVAGGALSDASLARLAAADPASLPLVAGEPRIGACVGRIGKFVCIGLNYADHAAEAGLAVPAEPVVFGKWTSAVSGPHDGIEIPRGSVKTDWEVELGVVIGRACKNVDEADALSHVAGYCVVNDVSEREWQIERGGQWDKGKGFDTFGPIGPWLVTRDEIADPQALDLWLDVDGRRYQSGNTRTMVFTVARLIAYLSRCMSLQPGDVISTGTPPGVGMGVKPSPVYLKPGQTVRCGVAGLGEQQQRTRAAA
>NZ_CP009546.1|WP_038747265.1|1031963_1032788_+|IclR-family-transcriptional-regulator
MKPRKDAPAGAAQAPHDCEEIERYRAPALDKGLDILELLAEQKEGLTRTEITKELGRNASEIYRMLERLVARQYVIRSPGGDRYTLSLKLYSLAHRHPPLKRLIAEALPPMQRFADAAEQSCHLCVYDRGNLLVIAQVDGPGAWGISVRLGSRVGLVDTASGPVLLAFQTPEQRARMLVEHTKVEGELALDMREFDALLHEIRASGRLRQKSRQAFGVTDIAYPVLGPSGHAIAALTCPYVRRIDTHAAPCAEDVDAQLRATARHLSMLKEAAA
>NZ_CP009546.1|WP_011853874.1|1033087_1034491_+|indoleacetamide-hydrolase
MTSHRDTYVRSASVRAIADAVNGRRVRALEQAEAALERLALVEPLAAMTHVAPEIARRAAANVDAQIASGRRLPLAGVPFVIKDNLFTADMPTRAASPALLGFDATRNATAVQQLLDAGAVPLGKANMHELAFGITSANGYFGAVRNPHDPARIAGGSSGGTACAVAAGIAFGLGTDTGGSVRIPAAFCGVAGLRPTPRRYSTEGVLALSPTRDTVGPIAHGIDDLLLLDAVLTGDAGEPAPVALAGLRVGVPDAPYFDGLDPAVAELTERAFAALTDAGARLIPLAAHALHEADEACGFPIAGFEALAYWRRFSAERLDLPFAEFVARLGSDDVRHLFRMLIDAPPSSDAYAAAIDVLQSTVRWYDQAFHRTGVDCIALPTVQCDAPLVTDSGHDLPSDAAYALFTRVIRQTGPATLGGVPSVSIPAGLSKHTGVPVGLMLEGPAGNDRRLLAIAREVERLLARAP
>NZ_CP009546.1|WP_004266659.1|1034676_1035228_+|hypothetical-protein
MDVMAKLLTDLEFQRFSELQQKQASFTITPEEADELRDIVARAQKKRDDRASAMRAIEAYIAQFDITPDELFSPEQIGEAARTYGLIAAGKKERSLPPSLTFNGKPYQWTKTLPDEVRLPLFDAFKAGESIKRFIAMPKDAARCALTVARLERETGAVYADTLLDELAISRKHVEEAAAKLAA
>NZ_CP009546.1|WP_004552209.1|1035746_1038110_-|GNAT-family-N-acetyltransferase
MTVRNLDALFHPTAVAVVGASPRPGSVGAMVWACVLDGRFGGAIWPVNPKYGELNGHKVYPYVDQLPSAPSVALICTPPATWPGIVRKLGGLGVRAAIIVGETRSGADRAALERALAAAKPYLLRVVGPGSLGVVSPALGAHFGAPACIVKAGGVAWVSQSNALTNAVLGWAHARGLGFSHAVALGGEADVDAADVLDYLASDAETRAILLELDTVKSARKFMSAARAAARNKPVLALRAGRGDSGDLLYTAAFQRAGMVRVDALDDLLDEIEALGVGRAAATSGGVTLVTSDRGVAKLAVDALAAAGETLAQWPRAAVDEVGGALPAGIVAGNPLLLGDDARPEYFGAALKALAQHPPTGTVFVVHATSHSAPAVDVARVLIESRKFARRGMLACFFGGVDAATRDALHVHGIPVHTTPQRLARAHARLVDYQLGRELLMQTPEGTPPQPAASISAARHTARAALAQGRDGFEGDAALEWLAGFGIERATDADVDMGDTIVDITVGMYDDPNFGPVFRYSVPPADGVSAPFVVYGLPPFNTVLARAVVARSPYAHRAPPEPLLQALTALSQAVCDVREIVEMSLVLRVRPTRVVALGPHIRLATGRSRLAIVPYPRYLEQQLDWRGERITVRPIRPEDEAAHRELLSAMTPDDLRMRFFGAIRNFDHSQIARMTQIDYDREMALIATLDDADGRAHTLGAVRAVTDPDNEATEFAIAVRPDQKGKGLGRMLMTRIIDYARSRGTAWMIGEALRENTAMISLAKDSGFAVSSTEEPGVVAFRLKLQP
>NZ_CP009546.1|WP_162486803.1|1038651_1039545_+|hypothetical-protein
MLKRPSRNIGPAGSGIENGGPANSMHCPIAGNRRAGQKIAVQSSERRGPPLTRFEFNAQCHCAISVKYENNGDARRECRANLRSRPRTEAPLAIPLPPPLRQASKLREPAWQAVEERLFGENSGISFMPAPVRRDSIAARMRKLSRKCRLHGFAVHVRWLFPPTGWPIRTDKWRYHALSARRRFSGIAVEHALAARIECETARRTRRGDTRHAPPKVSVFGNQGEAIRDWVSSFGEIARLPRQNRKRRPEWMRRRETFGSIRQVRIDGRIVRHPPERIGFIAESTHNPLRREIAGPP
>NZ_CP009546.1|WP_004190530.1|1039651_1039942_-|H-NS-histone-family-protein
MATYRQLTAQLEKLQQKIDKEREKAITDAIADIKAKIEEYDITPEELGFRSVKAAAKPKRALPPKYLNPKTGETWSGRGRAPAWLGKNRNRFLIKD
>NZ_CP009546.1|WP_004200624.1|1040044_1040224_-|hypothetical-protein
MFTSDGRATTMVQCPEGGPWDTCIQNARGICGGDFDTIKQSVDNGARNLLFACKARNGF

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Crispr_ID: NZ_CP009546_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009546_3

1277302-1277444

Orphan

Consensus_repeat	Method
CGCCGCAGTCGTCGCCGCAGTCGTCGCCG	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP009546_3

>merge|NZ_CP009546|3|1277302-1277444|CRISPRCasFinder
CGCGACAGGCGTCGGCGACGTGGCCGACGGCGCGGCGAGGACCGACGGCGATGCGTAAAGGTGAGAAGAAACGGGAGCCGCCGCAGTCGTCGCCGCAGTCGTCGCCGCAGTCGTCGCCGCAGTCGTCGCCGCAGTCGTCGCCG

>NZ_CP009546|3|3|1277302-1277444|CRISPRCasFinder
CGCGACAGGCGTCGGCGACGTGGCCGACG	GCGCGGCGAGGACCGACGGCGATGCGTAAAGGTGAGA
AGAAACGGGAGCCGCCGCAGTCGTCGCCG	CAGTCGTCGCCGCAGTCGT
CGCCGCAGTCGTCGCCGCAGTCGTCGCCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009546.1\|WP_004190976.1\|1289397_1290468_-\|peptidase-C45	unknown	unknown	gnl\|CDD\|367486
NZ_CP009546.1\|WP_041279082.1\|1286203_1287223_+\|VacJ-family-lipoprotein	unknown	unknown	gnl\|CDD\|377309
NZ_CP009546.1\|WP_004190247.1\|1265801_1266584_-\|outer-membrane-lipoprotein-sorting-protein	unknown	unknown	gnl\|CDD\|379924
NZ_CP009546.1\|WP_011853997.1\|1270285_1274407_-\|cytochrome-P450	unknown	unknown	gnl\|CDD\|365848
NZ_CP009546.1\|WP_004523246.1\|1264068_1264467_-\|DUF4345-domain-containing-protein	unknown	unknown	gnl\|CDD\|372978
NZ_CP009546.1\|WP_004190973.1\|1290480_1291209_-\|glutamine-ABC-transporter-ATP-binding-protein-GlnQ	unknown	unknown	gnl\|CDD\|181906
NZ_CP009546.1\|WP_004532566.1\|1258511_1259252_-\|iron-containing-redox-enzyme-family-protein	unknown	unknown	gnl\|CDD\|227711
NZ_CP009546.1\|WP_004536799.1\|1262043_1263147_-\|triacylglycerol-lipase	unknown	unknown	gnl\|CDD\|224001
NZ_CP009546.1\|WP_011853996.1\|1268768_1270253_-\|NAD(P)-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|109787
NZ_CP009546.1\|WP_011853995.1\|1266640_1268068_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226957
NZ_CP009546.1\|WP_011854002.1\|1291926_1292679_-\|glutamine-ABC-transporter-substrate-binding-protein-GlnH	unknown	unknown	gnl\|CDD\|236540
NZ_CP009546.1\|WP_041279083.1\|1293125_1293833_-\|phosphorylase	unknown	unknown	gnl\|CDD\|235926
NZ_CP009546.1\|WP_004529544.1\|1288054_1289401_-\|aspartate-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|236027
NZ_CP009546.1\|WP_152768855.1\|1291205_1291898_-\|glutamine-ABC-transporter-permease-GlnP	unknown	unknown	gnl\|CDD\|181907
NZ_CP009546.1\|WP_004523235.1\|1283568_1286202_+\|MMPL-family-transporter	unknown	unknown	gnl\|CDD\|274598
NZ_CP009546.1\|WP_011853994.1\|1264506_1265805_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009546.1\|WP_011853999.1\|1281325_1282951_-\|acyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|214838
NZ_CP009546.1\|WP_004523242.1\|1268067_1268769_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213222
NZ_CP009546.1\|WP_004190283.1\|1259285_1261904_-\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|182070
NZ_CP009546.1\|WP_011854001.1\|1287462_1288026_-\|4-carboxymuconolactone-decarboxylase	unknown	unknown	gnl\|CDD\|367130

Protein	Function_ID	Function_description	E-value
NZ_CP009546.1\|WP_004190976.1\|1289397_1290468_-\|peptidase-C45	gnl\|CDD\|367486	pfam03417, AAT, Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase.	3.98912e-53
NZ_CP009546.1\|WP_041279082.1\|1286203_1287223_+\|VacJ-family-lipoprotein	gnl\|CDD\|377309	pfam04333, MlaA, MlaA lipoprotein. MlaA is a component of the Mla pathway, an ABC transport system that functions to maintain the asymmetry of the outer membrane. MlaA is required for the intercellular spreading of Shigella flexneri. It is attached to the outer membrane by a lipid anchor.	5.89662e-103
NZ_CP009546.1\|WP_004190247.1\|1265801_1266584_-\|outer-membrane-lipoprotein-sorting-protein	gnl\|CDD\|379924	pfam17131, LolA_like, Outer membrane lipoprotein-sorting protein. This is likely to be a family of outer-membrane lipoprotein-sorting proteins.	1.28968e-41
NZ_CP009546.1\|WP_011853997.1\|1270285_1274407_-\|cytochrome-P450	gnl\|CDD\|365848	pfam00067, p450, Cytochrome P450. Cytochrome P450s are haem-thiolate proteins involved in the oxidative degradation of various compounds. They are particularly well known for their role in the degradation of environmental toxins and mutagens. They can be divided into 4 classes, according to the method by which electrons from NAD(P)H are delivered to the catalytic site. Sequence conservation is relatively low within the family - there are only 3 absolutely conserved residues - but their general topography and structural fold are highly conserved. The conserved core is composed of a coil termed the 'meander', a four-helix bundle, helices J and K, and two sets of beta-sheets. These constitute the haem-binding loop (with an absolutely conserved cysteine that serves as the 5th ligand for the haem iron), the proton-transfer groove and the absolutely conserved EXXR motif in helix K. While prokaryotic P450s are soluble proteins, most eukaryotic P450s are associated with microsomal membranes. their general enzymatic function is to catalyze regiospecific and stereospecific oxidation of non-activated hydrocarbons at physiological temperatures.	2.27815e-72
NZ_CP009546.1\|WP_004523246.1\|1264068_1264467_-\|DUF4345-domain-containing-protein	gnl\|CDD\|372978	pfam14248, DUF4345, Domain of unknown function (DUF4345). This family of proteins is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 125 and 141 amino acids in length. There is a single completely conserved residue E that may be functionally important.	8.95852e-20
NZ_CP009546.1\|WP_004190973.1\|1290480_1291209_-\|glutamine-ABC-transporter-ATP-binding-protein-GlnQ	gnl\|CDD\|181906	PRK09493, glnQ, glutamine ABC transporter ATP-binding protein GlnQ.	1.19081e-174
NZ_CP009546.1\|WP_004532566.1\|1258511_1259252_-\|iron-containing-redox-enzyme-family-protein	gnl\|CDD\|227711	COG5424, COG5424, Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C [Coenzyme metabolism].	9.05425e-44
NZ_CP009546.1\|WP_004536799.1\|1262043_1263147_-\|triacylglycerol-lipase	gnl\|CDD\|224001	COG1075, LipA, Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only].	1.68842e-42
NZ_CP009546.1\|WP_011853996.1\|1268768_1270253_-\|NAD(P)-binding-domain-containing-protein	gnl\|CDD\|109787	pfam00743, FMO-like, Flavin-binding monooxygenase-like. This family includes FMO proteins, cyclohexanone mono-oxygenase and a number of different mono-oxygenases.	2.2241e-73
NZ_CP009546.1\|WP_011853995.1\|1266640_1268068_-\|ABC-transporter-permease	gnl\|CDD\|226957	COG4591, LolE, ABC-type transport system, involved in lipoprotein release, permease component [Cell envelope biogenesis, outer membrane].	1.93515e-29
NZ_CP009546.1\|WP_011854002.1\|1291926_1292679_-\|glutamine-ABC-transporter-substrate-binding-protein-GlnH	gnl\|CDD\|236540	PRK09495, glnH, glutamine ABC transporter periplasmic protein; Reviewed.	1.92973e-161
NZ_CP009546.1\|WP_041279083.1\|1293125_1293833_-\|phosphorylase	gnl\|CDD\|235926	PRK07077, PRK07077, phosphorylase.	1.81099e-97
NZ_CP009546.1\|WP_152768855.1\|1291205_1291898_-\|glutamine-ABC-transporter-permease-GlnP	gnl\|CDD\|181907	PRK09494, glnP, glutamine ABC transporter permease protein; Reviewed.	1.26105e-125
NZ_CP009546.1\|WP_004523235.1\|1283568_1286202_+\|MMPL-family-transporter	gnl\|CDD\|274598	TIGR03480, HpnN, hopanoid biosynthesis associated RND transporter like protein HpnN. The genomes containing members of this family share the machinery for the biosynthesis of hopanoid lipids. Furthermore, the genes of this family are usually located proximal to other components of this biological process. The proteins appear to be related to the RND family of export proteins, particularly the hydrophobe/amphiphile efflux-3 (HAE3) family represented by TIGR00921.	0
NZ_CP009546.1\|WP_004529544.1\|1288054_1289401_-\|aspartate-aminotransferase-family-protein	gnl\|CDD\|236027	PRK07483, PRK07483, aspartate aminotransferase family protein.	0
NZ_CP009546.1\|WP_011853999.1\|1281325_1282951_-\|acyltransferase-domain-containing-protein	gnl\|CDD\|214838	smart00827, PKS_AT, Acyl transferase domain in polyketide synthase (PKS) enzymes.	1.08599e-55
NZ_CP009546.1\|WP_004523242.1\|1268067_1268769_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213222	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.	1.92366e-104
NZ_CP009546.1\|WP_004190283.1\|1259285_1261904_-\|EAL-domain-containing-protein	gnl\|CDD\|182070	PRK09776, PRK09776, putative diguanylate cyclase; Provisional.	8.23599e-119
NZ_CP009546.1\|WP_011854001.1\|1287462_1288026_-\|4-carboxymuconolactone-decarboxylase	gnl\|CDD\|367130	pfam02627, CMD, Carboxymuconolactone decarboxylase family. Carboxymuconolactone decarboxylase (CMD) EC:4.1.1.44 is involved in protocatechuate catabolism. In some bacteria a gene fusion event leads to expression of CMD with a hydrolase involved in the same pathway. In these bifunctional proteins CMD represents the C-terminal domain, pfam00561 represents the N-terminal domain.	0.00979497

>NZ_CP009546.1|WP_011853997.1|1270285_1274407_-|cytochrome-P450
MSKHRQAPGPRGGLVMGNLAAYKRNPITMLLRLHQQYGDVARNRLGPFVTHAVAHPDHIQYVLQENHRNYVRGRFYDNFKMFFGDGLLTTDGEFWRRHRRVVQPLFHKKQVDAHTAAVGDAALALAHRWSALPPGKALDVVEEMMHLSLRMLGLMVFNTDVSSHAEAVGPAVRFGIEAMMPQGNLNDFIPRWAPTRFNRRIAHARRAIDTIVAKIIADHREARCEPSDVISLLLNARDPDTGAPMTQQEVHDEVMTVFLAGHETTGAGLAWALYALAQHPAVLRQLRDELDARLGGRAPTVQDFEQLPYLSQVVDEVLRVYPPIWGFTRDLVEDDEIGGYRIPARSSVFMSPYVTHRHPAFWRNPDAFDPENFASDAPARHRFVYFPFGGGMRKCIGFQTALLQMRVLVAVVAQHFDLNALPGHPIELGATISLRPVHGIRLIVKPRERQQSHLARVREHESARALRPLGDTATTAGAACPMTAAREPGASAAALAAVEAGALDAAHRGGAAAAAAGEPCPPRDPAEAAPLPLAAAPAPASPAVDADASARGVPAWRFTWRPVPVDPVPDEPSPALSGRRIALVNGRGGTAERVAAALARTCAKVSVFAPAASADHAEAARVFVNEAGPLDGIVDLGLEAPFALDDAGAWEAPMRRTVELLKACYGDWAAEDDTSRLFYVALTWMDGQMGYGETAGAQPLGGLWAGLAKTLPQELPNCNVRVLDIAPDETGRVDRLVVNELYRWGLFEVGYRGGVRYTLHAKRNELPPHAVDARTTLGAGDTVLFSGGARGIGLLCARALAERHGCTVIVTGRETPPDGGEPWMALDEPGFKHYGLEQLRAATPEHPPKAIRAALQRLKRRRELRTALDEMAALGLPVHYRVCDVTDRAAVRALCDELGDSLRMVIHNAGVDRPVRLIQKRAEDFADTVRTKVLGFANLCDAVRARPRLVQFCNVGSLTGRWGGMTGETDYAAANEALARLGLWAARHAFSPACGVKTLVWPTWEGVGMITNFAVTQRYVSPMNVDEGVRHWLRELAAPGSGEVMFMGAVGRAPTPVQIKGFVPIRELPNIGELVTRRHHVGEPVRFRPFKRFESRYVIDPAVAPYAHAFRFNGRAVLPASLVLEHACAVGDWVMPPTGEPRELSEMTNVVLRLDALPDVPAGGAPVELASEAAGYMIGDVWCVDVRCSDARTQAELLSMTLVYRPQPEQIGAAFARAPDTTPEPAPLTSAPHAAWNGELLPAGDWSVPDDASAGIVRIGRVPPAAVLSLWALPFPLELRLPVNHVEHVLRVLLAEWGAARADAPAVWRIGGAKLARLPAASADGVVEYAAGRFAVLDARGYVLLRIDDARVDGEPAQAALPETGALADPLTA
>NZ_CP009546.1|WP_011853996.1|1268768_1270253_-|NAD(P)-binding-domain-containing-protein
MTTTNTTANTTTEPAAPGAARAAPATPPIRDCLDRYCIIGGGAAGIATAKNLREHGIAFDLIEREDDIGGTWYYGKPCSAIYQSVHMISSREFSEYTDYPMPADYPTYARGDQALAYLRDYARRFGVYEHAQFNRTVLEVAPLAHGGAWRVELDGHDVRHYKGVFVCNGHLSKPQVPDYPGRFDGLQLHSALYKTPDVLKGKRVLVVGAGNSGCDIAVEAVHHASAVFHSTRRGYFYWPKFLFGIPADRWAEWPLKLRMPLWARRFFGERLLRLTTAGQPEDYGLPKPDHKLFEAHFIINSTLFYHLGHGDLVAKPDVVELKGDRVAFSDGSEERIDAIVYATGFQLSFPFLDQSYLQWDKMQPRLYLNMFDRAHPNLFFIGLFQTSTGNWPLMDYQAQLVARYLRARDAAPRKAARLDRMIGRDRSNWNGGIRFSDTQRHVIEVEHFAYRLQLKRLIRALPDSRVAARQARPVAVASAVPAPAAAARARTGDA
>NZ_CP009546.1|WP_004523242.1|1268067_1268769_-|ABC-transporter-ATP-binding-protein
MAIVRVENVSKTYLLDSVKVTGLAGVSVDIEANRFTVLSGPSGSGKTTLLNMIGCIDRPDAGRVIVAGQDTAALCDDALSDFRAREVGHVFQSFNLLPVLSAYENVEYPLLMARTPARERARRVAYLLDAVGLAGKGAHRPSQLSGGQRQRVAIARALAAGPSLVLADEPTANLDSVTGRAIIALMREMQRESGVSFIVSSHDPQVLEAADDVVQIRDGRIVERRRIAQEAQG
>NZ_CP009546.1|WP_011853995.1|1266640_1268068_-|ABC-transporter-permease
MHTFMLALRNLQRNRRRSITTLLAMVVGVCAVLLFGGFSKDITFGLQTDFVRRSGHLQIQRHGYYQYGSGNPVAYGIGGYARLIAQLRDDPVLAPMIAVITPTLQFGGIAGNFEAGVSRTVLAQGAIADEQDRMQQWNDYGFPLTPKPYPLVGTAPDAAIVGNGVARVLHLCAPLRVPDCGDGDVARQPAPQAASGASGADAPADVLALAAAEAHAQESGRGERAGAAHIEVLAANAYGAPNVGGFTVAKAEQQGVKELDDVYLAMHLPRAQRLVYGGDAPRVTAIEIQLRHTAQLPAARARLDRLFGGRFEGQPLDVLDFAALNPFYDQTNRMFSMIFGFVFVLIGAIVLFVVSNTMSTAILERTVEIGTLRSMGVRRGGIQALFVCEGALLGVVGASIGVLVALALAFVVNHSGLAWTPPARIDSVALTVRVWGEWRLIALTFVGLAFVAGFSAWLPARHAARLSIIDALRYA
>NZ_CP009546.1|WP_004190247.1|1265801_1266584_-|outer-membrane-lipoprotein-sorting-protein
MRRLFRQWWAGLSFCAAALAHAQTAPDPQVLLAQSDAIRTPAKSFVLTATLTEYRAGKQVDGNTLSIYSKPDAPGGAFRTLVRFVAPARDTGKLMLKNGNDLWFYDPANQASIRISPDQRLLGQAANGDVVTVNLAHDYRAALKGAEDVMDGDRQTRHCYKLSLTGNAPGLTYHRIEMWLDASNSRPVKAKFYSESDRLLKSAFYRRYTAELGVERPTETVIIDGLDPNWVTVMRFSGYAWRDIPDAWLQRDYLPRFQAQ
>NZ_CP009546.1|WP_011853994.1|1264506_1265805_-|hypothetical-protein
MTRRAWAILMCAAAAAMPLRAAATGDADAVNDATNAALDLADATPVAAPETARPWKFSVQDAVRWSDGRGAASSWRNQLSLEFQFAHALTPTLGVNFAMRFDRFDPLASGAASHRDVTLVKEAYASWKPSALLALDAGRINERIGAAIGYNPTDFFKAGAVSLDVPPDPDSRHTNRLGSVAVRAQRVWDSGSIALMLSPRLASRSVPGDPFATSDLQRTNGVDRWMLVGSQRIAPAIQPQWVLYGESGQSPQFGQNLSVLLGNAVVAYAEWTGGWRASLIGSATGGGNRDRAFRTRSAVGFTWTLPVDLSLTAELQGNSGGASASRWRALQASDAYAWGRAVRTSIAAQELPSRHGLFLMAAWRNVFVRRVDLTGFAQLDLGAGQQYWLELRRRFDKFDLAVQFLRQTGPAWSRFGAMPEASSVQVLGIFYQ
>NZ_CP009546.1|WP_004523246.1|1264068_1264467_-|DUF4345-domain-containing-protein
MSKRILQIATAILAAVPVTTGALGMMGIHDPLYASLGVALPADATLDGNLRFYAGVWFGLGLGAFWTIPNIERNGVLFRALWTMIFVGGIGRLISLVSLGAPFAPFIGFTVLEIVGAPLFVWWQSRVAATAG
>NZ_CP009546.1|WP_004536799.1|1262043_1263147_-|triacylglycerol-lipase
MKSRFASAAAAVRGARKTLAKVWAAALVAAMCAFAAPAAHADAATGALDDYAATRYPIILVHGLTGTDDYFGVVPYWYGMRPDLQQHGATVFVADLSGFQSDIGPNGRGEQLLAYVQQVLAVTGAQKVNLIGHSQGGLTSRYVAAVAPELVASVTTIATPHRGSPFADFVLGALSLDPTGLSTPIFGALLNVFGILTSHTHNTNQDAIAALNALSTPYATQFDAQFPSAGLGAPGACASGAPSETVGGNVHLLYSWSGSAYQPITLLGLTTGALDKSTIPLVDPANVLDPSTLVFLTAGNIMALKQAGLNDGFTSTCSSLYGTVISTDYKWNHFDEINQLLGIRGAYAADPVAVLRTHANRLKLQGV
>NZ_CP009546.1|WP_004190283.1|1259285_1261904_-|EAL-domain-containing-protein
MASLRTIYTSDSATGHASGIWRRTRNGPPPVRFRRWRAPGKYETAATKRRGGGAEARWTMNGTSSMREQALGMNDGGGQAAELRPALDVWPILLMVSVLVCVVIVSLAVVSFLRVYIGGESTWSKSQKDAVIYLIRYAETGDERAYKLYEAAIDKPYRLSLARAALQRKPPDRASAREAIIASGIDPTDATAAALLLPALSWVAKINYALQCWMQADVELAEFRSVASQLHALVSSGHRDDARVKALEYRAWEINERVSGLPDRFSKAFSDEFRSSVALLLVCYFVASMFLMYLALVWARKAALQRLSIQYALDRSEAFAEAALSSVAEAVITVGLAKNVDFINNAAEQLLGYPAAACVGAPVSSVLMLLDKETGHAVDIVDEFWAREERTPIKREVHLLRRDHSKIVVQTTISEMGDRVHGHIGYVLILRNMTREQQFLESLAWQATHDVLTGLVNRVEFERRLEIALADTASGKERADSMLLMLDLDRFKEINDTCGHAAGDAMLREVTQRFQSCLDDDDVLARLGGDEFGVLLPHGAGSWPSKNKAERLRRSLEDFVFLWEGERFTVSVSIGVLELCKAPRNLEMAVKLADIACYIAKERGRNRIQLADPSDLQQARHVGDVQWSRRIKTALENDGFRLYVQPIVHTRPDSRTPERAEVLLRMMDSAGRDISPAAFLPAAERYGLMGLIDRWVIRTVFRKLSALPAREYHEYNVNLSGASISDERFLEFVIAELLSSGLEPSVICFEITETIAVKNLELASRFMGELRTIGCRFALDDFGAGMSSFRYLRSLPIDYLKIDGEFVSNMMSDRVSYGVVSAINEVAHSMRCSTVAEHVESEVELAMLRELGIDFCQGYFFAQPSPWREGGY
>NZ_CP009546.1|WP_004532566.1|1258511_1259252_-|iron-containing-redox-enzyme-family-protein
MHIPFERDGDLMDIGSYPHWLQDVVGTVRAARDRVRFHEVFSLMRDGRLAPRQLAAFFVNGWPVVEQFPKYMSMNLLKANGTNSSGEEKARRYLIRNIRVELNHVEHWVNWAEASGVPRRQLTDGDSPPAALALSHWCWKSSSADTLAASIAATNYAIEGVTGEWSADLCRSDVYEMGFPEAVRGRAMRWLRLHSSYDDKHPWEALDIVATILGQSPSTEQVRDVAAGIERSFRYFEMSLSCCLDA
>NZ_CP009546.1|WP_011853999.1|1281325_1282951_-|acyltransferase-domain-containing-protein
MAQVAFLFPGQGAFYAGATRALSGAYPVVQRAMQAIDAVSVRRLRRPLLATVWDGHIGAEDLLQHAPDLLQLAIYATSVSYFEALRARGVRPDVLVGHSFGEIAALTCAGAFSIETGAEIVCDRIDALRAAAPADGRMAAVGASPDAVRAHLAACFRGAPDARAGCVRIAVENHVSQTVVSGACEYVDEFRAYCARNNISAQVLNSPYAFHHEDLENARIEFGRRLKAYKNKALEYPVYSPILNRYYTAADDLGACLARHLVLPVRFGDGVARLKAAGIGAFVECGALNALSRISVRALGPGAVKTFPGASSAGGELAGLENVLAYFNGGSVMNDDIRASNLQLDFDEFWRNSGPGIVDKIKGELKRFFDARGLQATPAPQIVADHGVAAGFAGGLTAGAADYAPKLAAGVSSAAAPVAAPVVAAAAPAAPLAVAPAAPVAQAAAVPAASARVPRDRLFVELVAIYAEAMEYPVEVFTETVELEAELGIDSVKQTEIIQRISARYGLPPLPANFRAGDFKAMGQIVDFVYEHQGEAALVTS
>NZ_CP009546.1|WP_004523235.1|1283568_1286202_+|MMPL-family-transporter
MLTSVLVRLVAWSVRRPIWVVVLSLVIAALSSVYVAHHFKINTDISKLVENDPKWAALGRAIDDAFPQRNQTILAVVEAPAPEFAGAAADALAEGLRRETEAGRIGQVSEPAGGPLFEHDGLLFLPEQDVATTTAQLASARPLINVLAKDPSIAGLATTLSTTLGVPLQSGQVKLSGMAKLLSRSAATVDDVLAGKPAAFSWRALVDADAAREPARAFVTVQPVVNYGALKAGEQASRTIRATAQALKLDERFGAAVRLTGEQPLADEEFASVQDGALVNGIATLAIVLVILWIALRSKRMIASVFVTLFVGLVVTAALGLMMVGSLNMISVAFMVLFVGLGVDFAIQYGVKYREERHRDPNLDHALVGAAHAMGMPLTLATAAVAASFFSFLPTAYRGVSELGLIAGVGMFVALFTTLTLLPALLKLLAPPGERKPPGFPRLAPVDDYLDHHRKPILIGTLAVVIGALPLLAHLRFDFNPLHLKDPRSESMATLLALKDSPEASVNDVSLLAPSLAAANAAAQRLGALPEVGRTTTLSTFIPDAQPQKLATIAAAARELLPALTQPAAAPVPDAQRVAALKRASNLLEYASEDYPGPGAAAAKHLSESLAKLAAADAATRERAEHAFSVPLKIALNQLAMLLQPSEITRENLPPQIVRDWIAPDGRALVQISPKVVKGADPGDDAMLRRFAKAVKAAEPGAIGGPISILHSADTIIRAFLQAAALSVVSITVLLWITLRRFGDVLRTLVPLLVSGVVTLELCVLLGMPLNFANIIALPLMLGVGVAFKVYFVMAWRAGQTGLLQSSLTHAVLFSAATTATAFGSLWLSHHPGTASMGRLLALALSCTLIGAVVFQPVLMGKPRTKRVTNQSQGIDE
>NZ_CP009546.1|WP_041279082.1|1286203_1287223_+|VacJ-family-lipoprotein
MRTTASALAVCLLASGCATGPNRHPGDPLEPMNRAVFQFNDAVDSAIAVPIAKGYQKVTPTPLRTAISNFFSNLGDLGNIANNLLQLRITDATQDVMRVAMNSVFGVAGLIDVASLAGLPKHHQDFGLTLARWGVPAGPYLVLPVFGPSSIRDGVGRAVDVRFNLLNYIEPAARNPMYIAQFISARSDLLGATDLLQQAALDKYSFVRDAYVQQRRSLTYHGRSDDESLPHYDEPGGEPAGGPGGGAPGGLPQYEDPGEGAGGMPPGGAREPAGLPQYQDPGDEAAASAAASAASSASSASSASSASSASSASSASSASSASSVAPASAPAAQSPSSPN
>NZ_CP009546.1|WP_011854001.1|1287462_1288026_-|4-carboxymuconolactone-decarboxylase
MRKTKMRLPEFNRDTATDEQKAVLDEILSGPRGNLNGPFLGWIESPALAQHAQRLGAFCRYRTGLPPRLSELAILVTAARWRSQAEWHIHHPIALEAGVPAAAAEAIRTGAALSFDDADDALIFRFATELYETKRVSDATYDAAIARFGHRVVVNLVALLGYYALVAMTLNVFDMRADGQTALPFAE
>NZ_CP009546.1|WP_004529544.1|1288054_1289401_-|aspartate-aminotransferase-family-protein
MTTVFHRAPRASLPIAVAGDGIEIVDSTGTRYIDACGGAAVSCLGHSNQRVIDAIKRQAQQLPYAHTSFFTTQPAEALADRLVAAAPAGLEHVYFVSGGSEAIEAALKLARQYFVEKGEPARRHFIARRQSYHGNTLGALAIGGNAWRREPFVPLLIEAHHVSPCYAYREQRADETEEAFAQRLADELESRILALGPDTVAAFVAETVVGATAGAVPPVREYFRKIRAVCDKYGVLLILDEIMSGMGRTGYLFACEEDGVAPDLLTIAKGLGAGYQPIGATLVSDAIYRTIVDGSGFFQHGHTYVGHASACAAALEVQRVIDEERLLENVKARGEQLRASLAVRSAEQPHIGDVRGRGLFVGVELVRDRDTKAPFDPRLKLNALVKREAMQRGLMVYPMGGTVDGHLGDHVLLAPPFICTAPQIDTIVERLGDAIDAALASIGAAALR
>NZ_CP009546.1|WP_004190976.1|1289397_1290468_-|peptidase-C45
MKFLTPVVVTGSPHDIGRQLGELARPAMDAYIAQSGAWRAVARWRGHPFVAELRRAAEAAFPALVAELDGIAAGLGWHAQDVFVWNCRGELIHNAPDGCTTLAACTPRERMIAHNEDGDPHLRGKCMLVDVRPDGKPGFVGFYYPGSLPGHTFAASRAGLVQTINNVRIRRPAAGVPRMIAARAVLDAASLDDALRVLRDTPHASGFHHMLGCAGDARIVSVEASVARTSVLAVEGVYGHANHLIHPGGDAEAQIVTASSADRQARLAQLLPPLRGAADASALWCVLADRAGGGLPIYRDDPDDPDDENTLATALFSIGDDGVAFEVRERGRVRFQQFVPRDAQRPPVHRHERGHA
>NZ_CP009546.1|WP_004190973.1|1290480_1291209_-|glutamine-ABC-transporter-ATP-binding-protein-GlnQ
MSMVEFRNVSKSFGHVPVLKDIDLRIDAGEVVVVVGPSGSGKSTMLRCINALEKITGGDLLVDGQSVKGKAAVIHGIRLEAGMVFQQFNLFPQMTALENVMFGPIQVRGASRAQARDQAMALLAKVGLEARANHYPSELSGGQQQRVAIARALAIRPKLMLFDEPTSALDPELRHEVLKVMRDLANEGMTMIVVTHEIGFAKQVGTRLLFMDQGGIAEDGDPKTLIDHPPTPRLKDFLKHVS
>NZ_CP009546.1|WP_152768855.1|1291205_1291898_-|glutamine-ABC-transporter-permease-GlnP
MPRRSERHRELNVQFDWSAIWAALPDLMDGVRLTVFIAFFGLAGGFLVGMIAGMFRAYGPAVLNVLAQVYIELIRGTPIVVQVMFLYFALPLLAHVRIDGLSAAVVAITLNSGAYLAEVVRGALLSIPKGLTEAGLAMGLSMPRVLVKIVGPLAFRRLIAPLGNQCIVSLKDTSLFIVIGVGELTRKGQEIIAGNFQAVEIWTAVAAIYLVLTGVMTLTLRFVEKRMRIL
>NZ_CP009546.1|WP_011854002.1|1291926_1292679_-|glutamine-ABC-transporter-substrate-binding-protein-GlnH
MGRRSFIKTIVALALVGASVAGAHAKELVVGTDTSFMPFEFKQGDKYVGFDLDLWAEIAKGAGWTYKIQPMDFAGLIPALQTQNIDVALSGMTIKEERRKAIDFSDPYYDSGLAAMVQANNTTIKSIDDLNGKVIAAKTGTATIDWIKAHLKPKEIRQFPNIDQAYLALEAGRVDAAMHDTPNVLFFVNNEGKGRVKVAGAPVSGDKYGIGFPKGSPLVAKVNAELARMKADGRYAKIYKKWFGSEPPKS
>NZ_CP009546.1|WP_041279083.1|1293125_1293833_-|phosphorylase
MAGSGRPAAPVIAVAGMAFEARIARGAGVEAVYAARADRLERALAEAARAHGCAGIVSFGTAGGLAPDLAPGALIVADSVDGPFGVLDTDAGWSARIVAALAGTPAASRARRGKVAAVGAPVTGAHEKDALHRAKGALAVDMESHIAGAFAAARGVPFAVCRAIVDPAWRTLPKAATASLRDDGSTAILPILRELAKQPSQLGALLQVAGDARAARATLVQARQAFERAGAWRIG

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Identity
NZ_CP009546_2	2.2\|1027921\|21\|NZ_CP009546\|CRISPRCasFinder	1027921-1027941	21	NZ_CP009546.1	1027953-1027973	1.0
NZ_CP009546_2	2.2\|1027921\|21\|NZ_CP009546\|CRISPRCasFinder	1027921-1027941	21	NZ_CP009546.1	1027961-1027981	1.0
NZ_CP009546_3	3.2\|1277397\|19\|NZ_CP009546\|CRISPRCasFinder	1277397-1277415	19	NZ_CP009546.1	1277433-1277451	1.0
NZ_CP009546_3	3.2\|1277397\|19\|NZ_CP009546\|CRISPRCasFinder	1277397-1277415	19	NZ_CP009546.1	1277445-1277463	1.0

1. spacer 2.2|1027921|21|NZ_CP009546|CRISPRCasFinder matches to position: 1027953-1027973, mismatch: 0, identity: 1.0

gacagcacgacagcacgacag	CRISPR spacer
gacagcacgacagcacgacag	Protospacer
*********************

2. spacer 2.2|1027921|21|NZ_CP009546|CRISPRCasFinder matches to position: 1027961-1027981, mismatch: 0, identity: 1.0

gacagcacgacagcacgacag	CRISPR spacer
gacagcacgacagcacgacag	Protospacer
*********************

3. spacer 3.2|1277397|19|NZ_CP009546|CRISPRCasFinder matches to position: 1277433-1277451, mismatch: 0, identity: 1.0

cagtcgtcgccgcagtcgt	CRISPR spacer
cagtcgtcgccgcagtcgt	Protospacer
*******************

4. spacer 3.2|1277397|19|NZ_CP009546|CRISPRCasFinder matches to position: 1277445-1277463, mismatch: 0, identity: 1.0

cagtcgtcgccgcagtcgt	CRISPR spacer
cagtcgtcgccgcagtcgt	Protospacer
*******************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

484723 : 499474

Burkholderia_phage(40.0%)

integrase

attL 481892:481907|attR 499892:499907

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
481892:481907	attL	NA	NA	NA	NA
WP_158336013.1\|484723_485344_+	helix-turn-helix domain-containing protein	A0A0R6PHL1	Moraxella_phage	2.7e-14	27.6
WP_023358832.1\|485340_485625_+	hypothetical protein	Q76H12	Enterobacteria_phage	2.2e-11	45.5
WP_011853572.1\|485753_486071_+	hypothetical protein	NA	NA	NA	NA
WP_011853575.1\|486499_486847_+	hypothetical protein	A4JX37	Burkholderia_virus	1.7e-58	100.0
WP_041278991.1\|486889_487117_+	hypothetical protein	NA	NA	NA	NA
WP_011853577.1\|487133_487376_+	hypothetical protein	I6NVM7	Burkholderia_virus	1.1e-14	56.1
WP_011853578.1\|487372_487702_+	hypothetical protein	Q3HQW8	Burkholderia_phage	7.7e-08	61.8
WP_144411129.1\|487698_487962_+	hypothetical protein	NA	NA	NA	NA
WP_009977930.1\|488134_488290_+	hypothetical protein	NA	NA	NA	NA
WP_009977932.1\|488292_488574_+	KTSC domain-containing protein	A9YWW2	Burkholderia_phage	6.1e-30	73.6
WP_011853580.1\|488615_489659_+	recombinase RecT	B5AX97	Iodobacteriophage	4.9e-56	52.7
WP_041279133.1\|489658_490276_+	hypothetical protein	NA	NA	NA	NA
WP_144411163.1\|490283_491039_+	hypothetical protein	NA	NA	NA	NA
WP_011853583.1\|491035_491281_+	hypothetical protein	NA	NA	NA	NA
WP_009977937.1\|491277_491463_+	hypothetical protein	A9YX20	Burkholderia_phage	4.0e-06	38.6
WP_103852160.1\|491506_492196_+	hypothetical protein	NA	NA	NA	NA
WP_079997581.1\|492682_493201_+	site-specific DNA-methyltransferase	B4UTY5	Rhizobium_phage	3.9e-14	52.7
WP_011853588.1\|494675_495116_+	hypothetical protein	A9YWU7	Burkholderia_phage	2.6e-19	86.4
WP_004532300.1\|495127_495415_+	hypothetical protein	A9YWU1	Burkholderia_phage	5.4e-50	98.9
WP_011853589.1\|495411_495747_+	hypothetical protein	A9YWU9	Burkholderia_phage	1.7e-31	91.4
WP_045591785.1\|495746_495980_+	AlpA family transcriptional regulator	A0A077K9Z8	Ralstonia_phage	1.6e-15	66.7
WP_011853591.1\|495948_497196_-\|integrase	site-specific integrase	A0A077KET4	Ralstonia_phage	1.0e-140	61.8
WP_004187519.1\|497548_499474_-	selenocysteine-specific translation elongation factor	A0A2K9KZ60	Tupanvirus	1.8e-16	30.0
499892:499907	attR	NA	NA	NA	NA

DBSCAN-SWA_2

1408027 : 1474477

Staphylococcus_prophage(16.67%)

transposase,holin,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011852452.1\|1408027_1410223_+\|holin	phospholipase C, phosphocholine-specific	NA	NA	NA	NA
WP_041278778.1\|1410804_1411461_+	hypothetical protein	NA	NA	NA	NA
WP_144411166.1\|1412014_1413184_+\|transposase	IS30 family transposase	Q9MBM9	Staphylococcus_prophage	4.2e-32	30.4
WP_079997294.1\|1414546_1414801_+	SET domain-containing protein-lysine N-methyltransferase	NA	NA	NA	NA
WP_009939053.1\|1414797_1415817_-	AraC family transcriptional regulator	NA	NA	NA	NA
WP_004533753.1\|1415836_1416289_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_038730982.1\|1416848_1417694_+	ABC transporter permease	NA	NA	NA	NA
WP_041279095.1\|1417680_1418532_+	ABC transporter permease	NA	NA	NA	NA
WP_004552621.1\|1418528_1419560_+	extracellular solute-binding protein	NA	NA	NA	NA
WP_011852462.1\|1420147_1420453_+	H-NS histone family protein	NA	NA	NA	NA
WP_011852463.1\|1420772_1423559_+	type VI secretion system tip protein VgrG	A0A2H4JCD4	uncultured_Caudovirales_phage	3.1e-89	34.9
WP_011852464.1\|1423572_1425813_+	DUF3274 domain-containing protein	A0A077K801	Ralstonia_phage	6.8e-23	27.4
WP_038731238.1\|1425831_1427490_+	DUF2875 family protein	NA	NA	NA	NA
WP_004523722.1\|1427499_1427763_+	PAAR domain-containing protein	NA	NA	NA	NA
WP_004523721.1\|1428177_1428597_-	YjbQ family protein	NA	NA	NA	NA
WP_004523720.1\|1428616_1428943_-	thioredoxin family protein	NA	NA	NA	NA
WP_004529618.1\|1429413_1430106_+	hypothetical protein	NA	NA	NA	NA
WP_011852466.1\|1430691_1431453_-	DUF2244 domain-containing protein	NA	NA	NA	NA
WP_004523716.1\|1431449_1433045_-	cytochrome c oxidase subunit I	R9VX24	Flavobacterium_phage	1.9e-06	33.3
WP_041278789.1\|1434194_1435652_-	hypothetical protein	NA	NA	NA	NA
WP_154234199.1\|1435996_1436356_-	hypothetical protein	NA	NA	NA	NA
WP_041278791.1\|1437204_1439604_+	YadA-like family protein	A0A2C9CZG8	Yersinia_phage	5.6e-07	46.1
WP_011852471.1\|1439670_1441122_-	PhoPQ-regulated protein	NA	NA	NA	NA
WP_004523708.1\|1441193_1441409_+	hypothetical protein	NA	NA	NA	NA
WP_079997305.1\|1441381_1441975_-	hypothetical protein	NA	NA	NA	NA
WP_004523706.1\|1442559_1443105_+	type 1 fimbrial protein	NA	NA	NA	NA
WP_004529635.1\|1443184_1443907_+	fimbria/pilus periplasmic chaperone	NA	NA	NA	NA
WP_173430474.1\|1444067_1446764_+	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
WP_004529637.1\|1446756_1447329_+	type 1 fimbrial protein	NA	NA	NA	NA
WP_011852475.1\|1447360_1448050_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_011852476.1\|1448052_1449729_+	OmpA family protein	NA	NA	NA	NA
WP_004523700.1\|1450117_1450657_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_004523699.1\|1450690_1452190_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_011852478.1\|1452389_1452872_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_144411143.1\|1452999_1453542_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_004523698.1\|1453547_1454897_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_011852480.1\|1454893_1456195_+	type VI secretion system protein TssL	NA	NA	NA	NA
WP_011852481.1\|1456209_1460118_+	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_004529647.1\|1460307_1460877_+	hypothetical protein	NA	NA	NA	NA
WP_004523693.1\|1463840_1464110_+	PAAR domain-containing protein	NA	NA	NA	NA
WP_011852484.1\|1464122_1467575_+	RHS repeat protein	NA	NA	NA	NA
WP_041278796.1\|1467467_1468826_-	hypothetical protein	A0A292GJ55	Xanthomonas_phage	3.4e-110	50.1
WP_009928058.1\|1468858_1469887_-	fimbrial protein	NA	NA	NA	NA
WP_004549343.1\|1469941_1471012_-	type VI secretion system ImpA family N-terminal domain-containing protein	NA	NA	NA	NA
WP_004523688.1\|1471030_1472080_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_004547772.1\|1472076_1473957_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_004523686.1\|1473958_1474477_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP009545

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP009545_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009545_1

2785162-2785263

Orphan

Consensus_repeat	Method
ATCGAAGCGGCTGATCGAAGTGGC	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP009545_1

>merge|NZ_CP009545|1|2785162-2785263|CRISPRCasFinder
ATCGAGGCGGCTCATCGATGCGATCAATCGAAGCGATCAATCGAAGCGGCTGATCGAAGTGGCTGATCGAAGTGGCTGATCGAAGCGGCTGATCGAAGCGGC

>NZ_CP009545|1|1|2785162-2785263|CRISPRCasFinder
ATCGAGGCGGCTCATCGATGCGAT	CAATCGAAGCGATCA
ATCGAAGCGGCTGATCGAAGTGGC	TGATCGAAGTGGCTG
ATCGAAGCGGCTGATCGAAGCGGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009545.1\|WP_004189576.1\|2784553_2784754_+\|heavy-metal-associated-domain-containing-protein	unknown	unknown	gnl\|CDD\|225328
NZ_CP009545.1\|WP_004197835.1\|2776363_2776504_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009545.1\|WP_004525920.1\|2783476_2784184_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009545.1\|WP_009936044.1\|2790464_2790932_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009545.1\|WP_011850951.1\|2776622_2778299_+\|divalent-metal-cation-transporter	unknown	unknown	gnl\|CDD\|334596
NZ_CP009545.1\|WP_004197840.1\|2782867_2783371_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009545.1\|WP_004550954.1\|2789933_2790431_+\|TPM-domain-containing-protein	unknown	unknown	gnl\|CDD\|226285
NZ_CP009545.1\|WP_004188983.1\|2797119_2797461_+\|copper-binding-protein	unknown	unknown	gnl\|CDD\|378683
NZ_CP009545.1\|WP_011850955.1\|2785311_2787840_-\|heavy-metal-translocating-P-type-ATPase	unknown	unknown	gnl\|CDD\|319783
NZ_CP009545.1\|WP_041278187.1\|2797724_2798108_+\|avidin	unknown	unknown	gnl\|CDD\|366604
NZ_CP009545.1\|WP_004537779.1\|2778868_2779093_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009545.1\|WP_011850959.1\|2792342_2793914_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|236625
NZ_CP009545.1\|WP_004523016.1\|2789085_2789934_+\|YgcG-family-protein	unknown	unknown	gnl\|CDD\|224429
NZ_CP009545.1\|WP_011850957.1\|2788408_2789089_+\|LemA-family-protein	unknown	unknown	gnl\|CDD\|224618
NZ_CP009545.1\|WP_011850950.1\|2775515_2775839_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009545.1\|WP_011850958.1\|2791030_2792332_+\|TolC-family-protein	unknown	unknown	gnl\|CDD\|224455
NZ_CP009545.1\|WP_004542866.1\|2793910_2797123_+\|CusA/CzcA-family-heavy-metal-efflux-RND-transporter	unknown	unknown	gnl\|CDD\|226220
NZ_CP009545.1\|WP_004189043.1\|2779288_2780650_+\|glutathione-disulfide-reductase	unknown	unknown	gnl\|CDD\|235701
NZ_CP009545.1\|WP_011850949.1\|2775085_2775334_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009545.1\|WP_004189990.1\|2781242_2782583_+\|argininosuccinate-synthase	unknown	unknown	gnl\|CDD\|235434

Protein	Function_ID	Function_description	E-value
NZ_CP009545.1\|WP_004189576.1\|2784553_2784754_+\|heavy-metal-associated-domain-containing-protein	gnl\|CDD\|225328	COG2608, CopZ, Copper chaperone [Inorganic ion transport and metabolism].	3.06996e-08
NZ_CP009545.1\|WP_011850955.1\|2785311_2787840_-\|heavy-metal-translocating-P-type-ATPase	gnl\|CDD\|319783	cd02094, P-type_ATPase_Cu-like, P-type heavy metal-transporting ATPase, similar to human copper-transporting ATPases, ATP7A and ATP7B. The mammalian copper-transporting P-type ATPases, ATP7A and ATP7B are key molecules required for the regulation and maintenance of copper homeostasis. Menkes and Wilson diseases are caused by mutation in ATP7A and ATP7B respectively. This subfamily includes other copper-transporting ATPases such as: Bacillus subtilis CopA , Archeaoglobus fulgidus CopA, and Saccharomyces cerevisiae Ccc2p. This subclass of P-type ATPase is also referred to as CPx-type ATPases because their amino acid sequences contain a characteristic CPC or CPH motif associated with a stretch of hydrophobic amino acids and N-terminal ion-binding sequences. This subfamily belongs to the P-type ATPases, a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	0
NZ_CP009545.1\|WP_011850951.1\|2776622_2778299_+\|divalent-metal-cation-transporter	gnl\|CDD\|334596	pfam01566, Nramp, Natural resistance-associated macrophage protein. The natural resistance-associated macrophage protein (NRAMP) family consists of Nramp1, Nramp2, and yeast proteins Smf1 and Smf2. The NRAMP family is a novel family of functional related proteins defined by a conserved hydrophobic core of ten transmembrane domains. This family of membrane proteins are divalent cation transporters. Nramp1 is an integral membrane protein expressed exclusively in cells of the immune system and is recruited to the membrane of a phagosome upon phagocytosis. By controlling divalent cation concentrations Nramp1 may regulate the interphagosomal replication of bacteria. Mutations in Nramp1 may genetically predispose an individual to susceptibility to diseases including leprosy and tuberculosis conversely this might however provide protection form rheumatoid arthritis. Nramp2 is a multiple divalent cation transporter for Fe2+, Mn2+ and Zn2+ amongst others it is expressed at high levels in the intestine; and is major transferrin-independent iron uptake system in mammals. The yeast proteins Smf1 and Smf2 may also transport divalent cations.	2.25202e-84
NZ_CP009545.1\|WP_004550954.1\|2789933_2790431_+\|TPM-domain-containing-protein	gnl\|CDD\|226285	COG3762, COG3762, Predicted membrane protein [Function unknown].	3.88895e-21
NZ_CP009545.1\|WP_004523016.1\|2789085_2789934_+\|YgcG-family-protein	gnl\|CDD\|224429	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only].	4.58112e-64
NZ_CP009545.1\|WP_041278187.1\|2797724_2798108_+\|avidin	gnl\|CDD\|366604	pfam01382, Avidin, Avidin family.	5.26488e-28
NZ_CP009545.1\|WP_011850959.1\|2792342_2793914_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|236625	PRK09783, PRK09783, copper/silver efflux system membrane fusion protein CusB; Provisional.	2.98322e-83
NZ_CP009545.1\|WP_004188983.1\|2797119_2797461_+\|copper-binding-protein	gnl\|CDD\|378683	pfam11604, CusF_Ec, Copper binding periplasmic protein CusF. CusF is a periplasmic protein involved in copper and silver resistance in Escherichia coil. CusF forms a five-stranded beta-barrel OB fold. Cu(I) binds to H36, M47 and M49 which are conserved residues in the protein.	2.10207e-17
NZ_CP009545.1\|WP_011850957.1\|2788408_2789089_+\|LemA-family-protein	gnl\|CDD\|224618	COG1704, LemA, Uncharacterized conserved protein [Function unknown].	1.06282e-78
NZ_CP009545.1\|WP_011850958.1\|2791030_2792332_+\|TolC-family-protein	gnl\|CDD\|224455	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion].	2.60798e-16
NZ_CP009545.1\|WP_004542866.1\|2793910_2797123_+\|CusA/CzcA-family-heavy-metal-efflux-RND-transporter	gnl\|CDD\|226220	COG3696, COG3696, Putative silver efflux pump [Inorganic ion transport and metabolism].	0
NZ_CP009545.1\|WP_004189043.1\|2779288_2780650_+\|glutathione-disulfide-reductase	gnl\|CDD\|235701	PRK06116, PRK06116, glutathione reductase; Validated.	0
NZ_CP009545.1\|WP_004189990.1\|2781242_2782583_+\|argininosuccinate-synthase	gnl\|CDD\|235434	PRK05370, PRK05370, argininosuccinate synthase; Validated.	0

>NZ_CP009545.1|WP_004189576.1|2784553_2784754_+|heavy-metal-associated-domain-containing-protein
MKLEVKDMSCGGCANAITQAIQTADSSARVSVDVASKVVDVGSALGIERVVAIIEAAGFHPAVLAA
>NZ_CP009545.1|WP_004525920.1|2783476_2784184_+|hypothetical-protein
MRAAVAAAAFSASLPAGAAGPAIDPGRYLYVEGGSAHGVLTVKGNAFEIETIGGNCHTCALSGTFDGRVGIARDGENVCRIAVSGGHGDLRLDTSGSDACRDFCGMRASFDGEYRRPGAACTDRARDVRTERSHRQYAAHDYDAARTTLKALLAECGGFMGWIELDRAKSDLALTEYHRGDRAQCVAVLSDTIAYRAQQDHSDAFGLPPCDADNYKSTGDAILHNLALCQAPAKR
>NZ_CP009545.1|WP_004197840.1|2782867_2783371_+|hypothetical-protein
MFQMLPSMTFGRRLSVWWSCMWRQTLASAPVWILGVAIVGLSISRTHSAAGRPPSGGAAALAVATFFVCLVVCLPIAGYMVRGGFAAHALTAPERLAFRQALMVGLTTFGWAVLAALPISVATMPLRHAGYPLAGQAIGWVLNVAAGLYIVLPRQARRLRLLAGEAA
>NZ_CP009545.1|WP_004189990.1|2781242_2782583_+|argininosuccinate-synthase
MTTILENLPAGQKVGIAFSGGLDTSAALHWMRIKGAVPYAYTANLGQPDEDDYDAIPKRAIQYGAEGARLIDCRAQLVAEGIAALQCGAFHISTAGVTYFNTTPIGRAVTGTMLVAAMKEDGVNIWGDGSTYKGNDIERFYRYGLLVNPDLKIYKPWLDQQFIDELGGRAEMSEFMRQAGFEYKMSAEKAYSTDSNLLGATHEAKDLESLESGIKIVNPIMGVAFWRDDVKIDKEEVTIRFEEGRPVALNGVEYKDAVALLLEANRIGGRHGLGMSDQIENRIIEAKSRGIYEAPGLALLYIAYERLVTGIHNEDTIEQYRENGRRLGRLLYQGRWFDPQAIMLRETAQRWVARAVTGEVTVELRRGNDYSIIGTRSPNLTYQPERLSMEKVQSMFSPRDRIGQLTMRNLDITDTRDKLRIYSQVGLLAAGESSALPKLKEDESGN
>NZ_CP009545.1|WP_004189043.1|2779288_2780650_+|glutathione-disulfide-reductase
MEFDYDLFVIGAGSGGVRLSRVAASYGARVGIAEEERIGGTCVLRGCIPKKLLVYASHYSHDVEDAAGYGWTFDIGLFSWPTLIEAKDREIARLSGIYVDLLNKSGVEIHTGRATLVGAHTVDVAGRRVTARHIAVATGSRPVLPPIPGIEHAITSREALELPELPQRIAIVGGGYIAVEFAGIFNGLGVDVDLFYRGEQILRGFDDDVRHALHGEMTKQGVAIHTRATIEAIERGADGGLTLRLAEGAYGPYDAVLYATGRVANGDGLGLEAVGVARDANGAIEVDAYSATTVPSIHAIGDVTARPQLTPVATRDGMLLAANLFGGKRIAADHRYVPSAVFSQPEIATVGLTEAQARAELGALDIYKTSFRALRHTLSGRDEKTFMKLVVARDSQRVVGAHMVGRDAAEIIQGIAIAIRAGATKAQFDETVGIHPTAAEEFVTLRQKEPDDA
>NZ_CP009545.1|WP_004537779.1|2778868_2779093_+|hypothetical-protein
MGILNTVGEIAGAVAAVEAAEKVDPDAGLLTKAAAAVAGFKGAEALENLVEKKKDDEAADGENTAAPDSDASQA
>NZ_CP009545.1|WP_011850951.1|2776622_2778299_+|divalent-metal-cation-transporter
MSTPTDISPPIALERDAVLDQAHVGDIKGAFGTIAHHDTAPRSGWWARMRTLLAILGPGLIVMVGDNDAGAFGTYTQAGQNYGTSLLWTLLLLVPVLFVNQEMVLRLGAVTGVGHARLIFERFGKFWGAFSVIDLFILNALTIVTEFIGITFVLDFFGVSKVAGVCIAAALTMAAVSTGDFRRFERFAVALCVLSLLLVPVLVSIHPPVHQMARDLFVPTWPAHAKRSDVMLLVIGIVGTTVAPWQLFFQQSYVIDKRITPRFIKYEKADLWIGIVLVMIGAIAMISFSAALYAGRPEAGGFTDAGGVIAGLAKYAGPTSATLFAIALLDACIIGAAAVSLATAYAIGDVFRIRHSLHRGVSDAKGFYLVYFGIVAAAAALVLMPGSPLGLLTEAVQTLAGVLLPSATVFLLLLCNDRAVLGPWVNSARLNLFTGAVVWVLVMLSIILTASVMYPDMSGEAMLEVLAGGTLFAALGLAATFVLRRRAGGADRANVAHDARDAHVDRAARDTWRMPPLDALPAPRVTLSTRIWMGVLRGYLVLAVGLVIVKVVQMAFFR
>NZ_CP009545.1|WP_004197835.1|2776363_2776504_+|hypothetical-protein
MQFGLLLSQLPHVDESRVHYDAMLSLKAAGEPASASFWQRLKALIS
>NZ_CP009545.1|WP_011850950.1|2775515_2775839_-|hypothetical-protein
MTDAKHRENNFRPAHAESFGAMQAARKLTGELARKPNRKESPYFMGFSGLIGRARSCASAQRLCHFYLPIFMRPAYNPPQFIKESHVDTSPGSSRPMPVGIGAAFAN
>NZ_CP009545.1|WP_011850949.1|2775085_2775334_-|hypothetical-protein
MLFQFLAVRFVHGPLFARRRRAAAARAPSALAMRPTVRARLPFIPRPAGCAIVAATAGAVALGALLSASGQQVGLNQAIRVS
>NZ_CP009545.1|WP_011850955.1|2785311_2787840_-|heavy-metal-translocating-P-type-ATPase
MTAAMPRRGDPTGSAFRPGSPPKTSTSTDATGALAMHDAHVHHDRSGDTNERRDPHRPHETKTPGETAVDPVCGMKVPIDTPRRYDYQGRTYRFCSDKCATAFRASPQRFVGTPKQRAGASAAKPGTVYTCPMHPQIRANAPGACPICGMALEPLTPDAAEDGNPELRSMTRRFQLGLVLVVPLVLMTMGAMVLPFDIGAGIDALLARWPRPFGMPASWSQWVQAALATPVVLWGGWPFLVRGWKSFVTRRLNMFSLIGLGVCVAYLFSVFALLFPDTLPQAFRSGHEIPLYFEASAVIVTLVLLGQVLELRARSRTSSAIRDLLQLAPHTAVRVNPDGSEQTVPLDAVVVGDTLRVKPGSKVPVDGIVVAGHSSVDESMITGEPVPAEKTEGSPVTGATVNQTGTFVMRAQKIGTDTLLARIVQMVAEAGRSRAPIQKLADQVSGGFVLAVIVLAALAFAAWAAFGPAPALANALVVAISVLIIACPCALGLATPVSIIVGVGRGAREGVLIKDAEALELMEKVDTVVVDKTGTLTEGRPRVQTIVALGGQSERALLGDAASLEGASEHPLAQAIVEHAARMGAERKPVASFDSVPGKGVKGTLDARTVALGNAHLMADLAIDCTAADADSNRLREAGQTVMYVAIDGRLAGYIGVADPIKETTPDAVQLLKASGTRIVMLTGDNPVTANAVARTLSLDGVKAGVLPEDKYRHVQALQQQGHVVAMAGDGVNDAPALAQANVGIAMGTGTDVAMNSARIVLVKGDLRGIARARALSVATMKNIRQNLFFAFVYNAVGIPVAAGVLYPWFGITLSPIFASAAMAASSVSVIGNALRLRGAKT
>NZ_CP009545.1|WP_011850957.1|2788408_2789089_+|LemA-family-protein
MRFHSSAPRPAATWIRLIRAALLAAFALTLSGCGYNAIQVQDEQVKASWSEVLNQYQRRADLVPNLVNTVKGYANQERDVLTRVTEARAQVGSIRATPELLSDPQAFAKFDAAQGQLTSSLSRLLVVSENYPQLKSDANFRDLQAQLEGTENRITVARNRYIRSVQAYNTTIRSFPSNLTAMAFGYKEKPNFSVENEAQIAKPPRVDFGTSSAPAPAPAPAAGASN
>NZ_CP009545.1|WP_004523016.1|2789085_2789934_+|YgcG-family-protein
MKGFLRAACFAILTFLSIGGVCRAEQPVPPLAARVTDETGTLTAAERATLEQSLKDFETRKGSQIAVLIVPTTQPETIEQYSIRVVEQWKLGRANVDDGALLIIAKNDRALRIEVGYGLEGVLTDATSRRIIDELIVPSFRRGDFYGGVSAGVGGMMRVIEGEPLPPPRARGGEEGGLGRVLPLLFVMTIVAGGVSRAIFGRLAGSVVTGGVVGFVAWLWSGALLVAIAAAAIALFFTLLGGGMGARVGGPFIGGRGGRGGGNDGFRGGGGGFGGGGASGRW
>NZ_CP009545.1|WP_004550954.1|2789933_2790431_+|TPM-domain-containing-protein
MDIARIARHLSMTRWRVAAAFPKRTLGKIERAIEASHEKHVGQLRFAVEGALHASMLLRGITARERAIDVFSELRVWDTEHNNGVLIYLLLADHDVEIVADRGIHARVDGDEWERVCRAMEAQFRRGRFEAGSIHGIEAVTALLARHYPSRRAPGGAWPSTPVVL
>NZ_CP009545.1|WP_009936044.1|2790464_2790932_+|hypothetical-protein
MRAATCNPIANNIARRTANHGYFAALYSCAMKIVRLLLVLLWCATLPLTGLAASGLAGDCPMQQAMSMSEDGAMPSMQDCESMRSSVAGKSGKSGEAANVFCKVMVQCQFGSLYHPMPAADVARPASPGRPLVFHYAKSLTVREPGGLWRPPRTA
>NZ_CP009545.1|WP_011850958.1|2791030_2792332_+|TolC-family-protein
MYSMLRAPHGRRARLHARTLVAALTFANAAAAFAQSAPLTLDAALQSAADRSAAMQAAQASVQASAELAVKAGQLPDPMLKAGIDNLPVDGPQRLTIGQESMTMRRIGIAQEWVSGDKRRLRTALANEVVGRERAGYLAQLADVRRQTAIAWLDAAYAKKALALQRELADEMNRELAATQAAYRGAKATAADALQARALLAQARDRQANARQAFDTALIGLSRWIAAPALDVAGEPPAPVSFVPSLPPDELRRVQPTLIAADEDVEVADADVALAASERRPNWTWEIAYQQRGAPYANMVSIGVTIPLPLDRRDRQDRDVAQKRALATKARLMYEDARRQVDADIRTQSATLESGRARLAELGRALLPAADERVRLADAAYRAGAGSLADAFAARRARLDARLQVLDLERDVARAWAQLDYQIVPSAMLAAAQ
>NZ_CP009545.1|WP_011850959.1|2792342_2793914_+|efflux-RND-transporter-periplasmic-adaptor-subunit
MNHIRLTRAALAVLAAVALSAAGYFAGARFGAHVDVAHRAHATNTTNAVDGADAKPGRKVLYWRDPMVPNQHFDKPGPSPFMNMPLEPVYADDGGGAPGVRIDPGLQQNLGIRYAKVRRRDVDEGFDAVGTTQFDESRTAVVQSRVTGYVDRLYASAPLQRIAKGAPIASLFVPDWLAPQEEYLALKRGAMDEALLAASRARMRALSIPDSVIANLDRTGRAQTHIVLASPETGVVSELNVRDGAMVTPGQTLAKIAGLSTLWAVIDVPEALASGVRPGMRVDATFEGDPQRRVSGAIREILPGVNATTRTLQARLELDNRALALTPGMLMRARVGASHAASRLVVPSDAVIATGKRSVVIVRTADDRLRPADVTVGRDAGDETEVLAGLEEGETVVASGQFLIDSEASLKSVLPRLEADASGALAARAARPPARSSPPAAQAGGAAPVYETTGKVEKITAADITFSHQPVPALGWGAMTMSFDKPAPAAFANVKAGDTVRFAFEANGDGYRLTKVEPVGGAR
>NZ_CP009545.1|WP_004542866.1|2793910_2797123_+|CusA/CzcA-family-heavy-metal-efflux-RND-transporter
MIAHVIRWSIRNRLLVLLATALVAAWGVVSLNRTPLDALPDLSDTQVIVKASYPGKAPRVVEDQVTYPLTTTLLGVPGAKTIRAYSSFGDAFVYVLFDDRTDQYWARSRVLEYLNQVQGRLPQGASVALGPDATGVGWVYEYALVDRSGRRDLGELRALNDWFLKFELKAVPDVAEVASVGGMVRQYQVVLDPDRLRAFGITQAAVADALGKANSESGGSVVEMAESEYMVRASGYLRSLDDFRNVVLRTSESGTPVLLGDVARVQIGPEMRRGIAELNGEGEVAGGVIVMRSGKNALSTIEAVKAKLAELRRSLPAGVELVTTYDRSQLIGRAVDNLKDKLIEEFVVVGLVCALFLFHLRSAFVAILSLPLGVLAAFIVMRHQGVNANLMSLGGIAIAIGAMIDAAVVMIENAHKHLESHEHAHPGAPLSSAARWELIAASAAEVGPALFFSLLIVTLSFVPVFALEGQEGKLFAPLAFTKTYTIAAAAGLSVTLVPVLMGYLIRGRIPREASNPLNRLLVRLYRPLLEATLARPWRAIAIAAAALVLTAIPMSRLGGEFMPPLDEGDLLYMPTALPGISAQKAAELLQQTDRLIKTVPEVATVFGKSGRADTATDPAPLEMFETTIRFRPRGEWRPGMTPGRLVDELDRVVKVPGLSNVWVPPIRNRLDMLSTGIKTPVGVKIAGPELAQIDRIAAQVEAAVKRVPGVTSALAERLNGGRYVDVDIDRRAAARYGLSVGDVQAVVASAIGGENVGEVIAGRERFPINIRYPREVRDSLEKLRALPIVTERGAQILLRDVAAVTIADGPPMIRSENARLSGYVYVDIRGVDLKTAVGAMQRAVAQQVALPPGYSIAWSGQFEYLERAAATLRTVIPVTLAVIFVLLFLTFDSAADALLLMTTVPFALVGGLWFVWALGHAVSVATAVGFIALAGVAAEFGVVMLLYLKRAYERRIAAGEPPNEATLADAIREGAVLRVRPKAMTVAVVLAGLVPIMIGHGSGSEVMQRIAAPMVGGMVTAPLLSMFVIPAAWLLLQRRRMRGAVRAASQAPVAGAAGADFSSIHTGESR
>NZ_CP009545.1|WP_004188983.1|2797119_2797461_+|copper-binding-protein
MKQWIAALMTLAAAAAPAFAAEAAAGPNTPAPPRDARPPAGDALTEAVVRQVDLATGMITLKHGALDNVGMPPMTMTFKAKDIAMAKRVRAGDSVRVRVENVDGVMTVVKLEK
>NZ_CP009545.1|WP_041278187.1|2797724_2798108_+|avidin
MQRLEHVLRRVKAGTGAPIDFSGTWKNELGSTMRIEQSGDSVSGTYESAVSENGGATSGQLSGYVDGDLIAFVVHWDQFQAITAWVGQGGPGASSDRINTLWQMTQQGEAGEEWASINAGADIFVKT

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

118863 : 158043

uncultured_Caudovirales_phage(50.0%)

coat,transposase,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004542513.1\|118863_120714_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_011851456.1\|120741_122157_-	hypothetical protein	NA	NA	NA	NA
WP_004193592.1\|122180_122447_-	PAAR domain-containing protein	NA	NA	NA	NA
WP_004521773.1\|122706_122934_-	hypothetical protein	NA	NA	NA	NA
WP_011851457.1\|122967_125775_+	type VI secretion system tip protein VgrG	A0A2H4JCD4	uncultured_Caudovirales_phage	1.5e-27	25.0
WP_011851458.1\|125777_126611_+	DUF4123 domain-containing protein	NA	NA	NA	NA
WP_028358364.1\|126747_127305_+	DUF3304 domain-containing protein	NA	NA	NA	NA
WP_041278305.1\|127301_127895_+	DUF3304 domain-containing protein	NA	NA	NA	NA
WP_038769098.1\|127891_130300_+	DUF2235 domain-containing protein	NA	NA	NA	NA
WP_011851462.1\|130408_133744_+	type VI secretion system tip protein VgrG	NA	NA	NA	NA
WP_011851465.1\|135297_135540_+	hypothetical protein	NA	NA	NA	NA
WP_004521762.1\|135557_135863_+	hypothetical protein	NA	NA	NA	NA
WP_011851466.1\|135875_138716_+	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	1.2e-19	25.7
WP_009973657.1\|138717_139593_+	hypothetical protein	NA	NA	NA	NA
WP_011851467.1\|139589_142433_+	hypothetical protein	NA	NA	NA	NA
WP_011851468.1\|142550_143471_+	hypothetical protein	NA	NA	NA	NA
WP_004526762.1\|143601_143853_+	DUF1153 domain-containing protein	NA	NA	NA	NA
WP_111963064.1\|143810_144719_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_004526764.1\|144762_145008_+	hypothetical protein	NA	NA	NA	NA
WP_004556892.1\|145348_145642_+	hypothetical protein	NA	NA	NA	NA
WP_009927991.1\|146273_146546_+	hypothetical protein	NA	NA	NA	NA
WP_004193855.1\|146808_147090_-	H-NS histone family protein	NA	NA	NA	NA
WP_011851472.1\|147557_148532_-	amidohydrolase family protein	NA	NA	NA	NA
WP_004552892.1\|148576_149836_-	MFS transporter	NA	NA	NA	NA
WP_011851475.1\|150279_151173_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_004531175.1\|151510_151732_+	hypothetical protein	NA	NA	NA	NA
WP_011851476.1\|151989_152535_+\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_011851477.1\|152587_153148_+\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_004526783.1\|153224_153749_+\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_004526784.1\|153766_154606_+	molecular chaperone	NA	NA	NA	NA
WP_011851478.1\|154650_157062_+	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
WP_011851479.1\|157077_158043_+\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA

DBSCAN-SWA_2

894750 : 902872

Ralstonia_virus(42.86%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011851783.1\|894750_895860_+	class II histone deacetylase	A0A2K9L2T7	Tupanvirus	7.8e-36	31.0
WP_004193371.1\|896054_896678_+	phospholipase D family protein	NA	NA	NA	NA
WP_004534930.1\|896804_896987_-	hypothetical protein	NA	NA	NA	NA
WP_011851784.1\|897853_898315_+	avidin	NA	NA	NA	NA
WP_011851785.1\|898390_898624_+	immunity 52 family protein	A4PE26	Ralstonia_virus	2.1e-12	59.1
WP_079996995.1\|898665_898893_-	hypothetical protein	Q8W6S4	Burkholderia_virus	2.7e-20	75.4
WP_004557051.1\|899143_899539_+	hypothetical protein	NA	NA	NA	NA
WP_004521807.1\|899819_900245_+	PAAR domain-containing protein	A4JWV5	Burkholderia_virus	1.1e-14	47.0
WP_011851787.1\|900241_900748_+	DUF4123 domain-containing protein	A4PE24	Ralstonia_virus	1.5e-18	39.4
WP_079996998.1\|901089_901692_+	hypothetical protein	NA	NA	NA	NA
WP_009920998.1\|901698_902424_+	immunity 52 family protein	A4PE26	Ralstonia_virus	5.8e-32	44.0
WP_079996999.1\|902608_902872_-	hypothetical protein	Q8W6S4	Burkholderia_virus	1.9e-25	82.6

DBSCAN-SWA_3

1409387 : 1418237

Tanapox_virus(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004522363.1\|1409387_1410230_+	alpha/beta hydrolase	A7XCB7	Tanapox_virus	1.0e-16	26.6
WP_004188957.1\|1410564_1411488_-	histone deacetylase family protein	A0A2K9KZC4	Tupanvirus	8.4e-44	36.5
WP_011851990.1\|1411666_1412962_+	lytic murein transglycosylase B	NA	NA	NA	NA
WP_004532363.1\|1413188_1414091_-	cysteine synthase CysM	A0A1X9I5F1	Streptococcus_phage	1.9e-53	39.9
WP_041278446.1\|1414102_1414318_-	hypothetical protein	NA	NA	NA	NA
WP_004189725.1\|1414441_1414759_-	helix-hairpin-helix domain-containing protein	NA	NA	NA	NA
WP_004190173.1\|1414830_1415823_-	ADP-glyceromanno-heptose 6-epimerase	R9S880	Prochlorococcus_phage	9.1e-28	30.9
WP_009921652.1\|1415881_1416805_-	D-glycero-beta-D-manno-heptose-7-phosphate kinase	A0A2H4N7X4	Lake_Baikal_phage	1.3e-15	27.1
WP_011851991.1\|1416836_1418237_-	UDP-glucose/GDP-mannose dehydrogenase family protein	A0A127AXI2	Bacillus_phage	4.2e-79	38.3

DBSCAN-SWA_4

1786301 : 1795538

unidentified_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004522151.1\|1786301_1787849_+	polynucleotide adenylyltransferase PcnB	H7BUW3	unidentified_phage	4.3e-24	31.2
WP_004194373.1\|1787885_1788413_+	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA
WP_004532195.1\|1788409_1789093_+	deoxynucleoside kinase	A0A249XZR7	Enterococcus_phage	2.0e-05	26.0
WP_004194137.1\|1789157_1789973_+	3-methyl-2-oxobutanoate hydroxymethyltransferase	A0A0N7HVJ8	Ostreococcus_lucimarinus_virus	8.8e-37	33.3
WP_004538732.1\|1790148_1792155_-	bifunctional anthranilate synthase component I family protein/class IV aminotransferase	S4VT78	Pandoravirus	8.2e-52	34.5
WP_004533593.1\|1792188_1793319_-	molecular chaperone DnaJ	A0A1V0SBY2	Catovirus	3.8e-22	27.6
WP_004194034.1\|1793585_1795538_-	molecular chaperone DnaK	A0A1V0SH73	Hokovirus	2.7e-148	49.2

DBSCAN-SWA_5

2095701 : 2152156

Pseudomonas_phage(12.5%)

integrase,transposase,plate,tRNA

attL 2098554:2098570|attR 2155731:2155747

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_041278550.1\|2095701_2097000_+\|tRNA	glutamyl-tRNA reductase	NA	NA	NA	NA
WP_004527811.1\|2097066_2098149_+	peptide chain release factor 1	A0A0S4KWG0	Pseudomonas_phage	6.7e-08	46.6
WP_004534980.1\|2098192_2099050_+	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA
2098554:2098570	attL	NA	NA	NA	NA
WP_004186955.1\|2099129_2099438_+	Grx4 family monothiol glutaredoxin	NA	NA	NA	NA
WP_004521981.1\|2099452_2100049_+	UbiX family flavin prenyltransferase	NA	NA	NA	NA
WP_004542691.1\|2100332_2101121_+	dioxygenase	NA	NA	NA	NA
WP_004527813.1\|2101655_2103257_-	APC family permease	NA	NA	NA	NA
WP_004196837.1\|2103690_2103894_+	cold-shock protein	A0A2H4N7Y6	Lake_Baikal_phage	6.3e-21	73.1
WP_011852262.1\|2104080_2105343_-	Hsp70 family protein	NA	NA	NA	NA
WP_004198059.1\|2106002_2106608_-	nitroreductase family protein	NA	NA	NA	NA
WP_079997102.1\|2106569_2107145_+	restriction endonuclease subunit R	NA	NA	NA	NA
WP_004198061.1\|2107104_2108388_-	MFS transporter	NA	NA	NA	NA
WP_011852264.1\|2108546_2109191_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_004527819.1\|2109535_2110159_+	DUF1415 domain-containing protein	NA	NA	NA	NA
WP_004527820.1\|2110250_2111153_-	SAM-dependent methyltransferase	NA	NA	NA	NA
WP_011852265.1\|2111280_2112417_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_011852266.1\|2112393_2112699_+	hypothetical protein	NA	NA	NA	NA
WP_004521968.1\|2112773_2113892_-	acyltransferase	NA	NA	NA	NA
WP_004199982.1\|2114327_2114831_-	LEA type 2 family protein	NA	NA	NA	NA
WP_004204896.1\|2115434_2117600_+	peptidase	A0A0P0IY26	Acinetobacter_phage	1.9e-46	27.1
WP_004185238.1\|2118655_2118892_+	hypothetical protein	NA	NA	NA	NA
WP_004204906.1\|2118994_2119225_+	hypothetical protein	NA	NA	NA	NA
WP_004199991.1\|2119840_2121109_+	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_004521963.1\|2121123_2123385_+	peptidase domain-containing ABC transporter	A0A2R8FG22	Brazilian_cedratvirus	2.3e-10	31.9
WP_011852269.1\|2123381_2124830_+	TolC family protein	NA	NA	NA	NA
WP_011852270.1\|2125039_2125990_-	hypothetical protein	NA	NA	NA	NA
WP_004199998.1\|2126115_2126967_+	M15 family metallopeptidase	NA	NA	NA	NA
WP_011852271.1\|2127117_2127231_+	hypothetical protein	NA	NA	NA	NA
WP_011852272.1\|2127238_2131132_+	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_004200003.1\|2131128_2132118_+	type VI secretion system-associated protein TagF	NA	NA	NA	NA
WP_011852273.1\|2132122_2133055_+	OmpA family protein	NA	NA	NA	NA
WP_004521957.1\|2133253_2134375_-	type VI secretion system protein TssA	NA	NA	NA	NA
WP_011852274.1\|2134464_2137134_-	type VI secretion system ATPase TssH	A0A223W0B1	Agrobacterium_phage	3.8e-89	32.0
WP_004200010.1\|2137167_2138268_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_011852275.1\|2138231_2140070_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_004204912.1\|2140149_2140632_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_004527837.1\|2140689_2141193_-	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_004521953.1\|2141265_2142756_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_004521952.1\|2142772_2143291_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_004531875.1\|2143327_2143999_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_004521950.1\|2144373_2144988_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_004555444.1\|2145096_2146443_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_004521948.1\|2146439_2147225_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_004535002.1\|2147710_2148049_-	DUF4102 domain-containing protein	Q8W6M6	Sinorhizobium_phage	1.2e-16	48.0
WP_009932052.1\|2148482_2149283_+	hypothetical protein	NA	NA	NA	NA
WP_004535005.1\|2149289_2150360_+	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA
WP_144411106.1\|2150642_2151762_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	3.6e-49	39.5
WP_076802946.1\|2151895_2152156_+\|integrase	tyrosine-type recombinase/integrase	C8CLF4	Xylella_phage	2.1e-16	68.1
2155731:2155747	attR	NA	NA	NA	NA

DBSCAN-SWA_6

2377143 : 2386671

Burkholderia_phage(22.22%)

integrase

attL 2368604:2368619|attR 2392608:2392623

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2368604:2368619	attL	NA	NA	NA	NA
WP_038776406.1\|2377143_2377788_-	lytic polysaccharide monooxygenase	A0A0K1Y848	Apis_mellifera_filamentous_virus	4.4e-07	30.4
WP_011852337.1\|2378665_2378938_-	BrnA antitoxin family protein	K4NZP3	Burkholderia_phage	2.4e-47	98.9
WP_011852338.1\|2379094_2380174_-	DUF3396 domain-containing protein	A9YX32	Burkholderia_phage	2.9e-160	98.6
WP_009974475.1\|2380173_2380626_-	VRR-NUC domain-containing protein	Q8W6S1	Burkholderia_virus	3.1e-31	58.8
WP_041278661.1\|2380883_2381426_-	PAAR domain-containing protein	A4JWV5	Burkholderia_virus	2.8e-47	55.8
WP_041278567.1\|2381680_2382598_-	DUF4935 domain-containing protein	A4PE40	Ralstonia_virus	3.1e-46	40.6
WP_028201013.1\|2382597_2382915_-	transcriptional regulator	A0A088CD40	Shigella_phage	4.8e-15	57.0
WP_045591613.1\|2383294_2383567_-\|integrase	tyrosine-type recombinase/integrase	Q9T1P3	Pseudomonas_phage	1.2e-14	56.3
WP_041278569.1\|2384135_2384618_-	DUF4411 family protein	NA	NA	NA	NA
WP_011852343.1\|2384604_2385753_-	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA
WP_041278575.1\|2385816_2386671_-\|integrase	site-specific integrase	Q9T1P3	Pseudomonas_phage	1.1e-61	46.6
2392608:2392623	attR	NA	NA	NA	NA

DBSCAN-SWA_7

3421890 : 3432846

Streptococcus_phage(16.67%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004197486.1\|3421890_3424005_-	elongation factor G	E4ZFJ7	Streptococcus_phage	5.8e-56	26.7
WP_011851199.1\|3424305_3424815_-	DUF192 domain-containing protein	A0A1B1IUW8	uncultured_Mediterranean_phage	4.2e-13	42.2
WP_071810810.1\|3425006_3425225_-	hypothetical protein	NA	NA	NA	NA
WP_004189780.1\|3425487_3426066_-	pseudouridine synthase	NA	NA	NA	NA
WP_011851200.1\|3426332_3427592_+	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	5.2e-12	63.0
WP_011851201.1\|3427564_3427747_-	hypothetical protein	NA	NA	NA	NA
WP_011851202.1\|3427759_3429370_+	multicopper oxidase family protein	NA	NA	NA	NA
WP_004196460.1\|3429499_3429703_-	cold-shock protein	A0A2H4N7Y6	Lake_Baikal_phage	6.8e-23	81.8
WP_004194131.1\|3430234_3430549_+\|protease	ATP-dependent Clp protease adapter ClpS	A0A218MMY6	uncultured_virus	4.4e-13	44.6
WP_004196461.1\|3430545_3432846_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	5.1e-167	42.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP009546

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP009545

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection