CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP009555	Burkholderia oklahomensis C6786 chromosome I, complete sequence	1 crisprs	RT,csa3,WYL,cas3,DEDDh,DinG	0	0	8	0
NZ_CP009556	Burkholderia oklahomensis C6786 chromosome II	1 crisprs	csa3,cas3,DinG	0	1	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP009555_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009555_1

348041-348139

Orphan

Consensus_repeat	Method
GCGCGGGCGGCGGCAACGGCCGCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP009555_1

>merge|NZ_CP009555|1|348041-348139|CRISPRCasFinder
GCGCGGGCGGCGGCAACGGCCGCGGTATCGGGCGGCGGCGGCGCACTCGCTTCTTCCGGCTTCTTGCATCCGGCAAGCGCGGCGGCGGCAACGGCCGCG

>NZ_CP009555|1|1|348041-348139|CRISPRCasFinder
GCGCGGGCGGCGGCAACGGCCGCG	GTATCGGGCGGCGGCGGCGCACTCGCTTCTTCCGGCTTCTTGCATCCGGCA
AGCGCGGCGGCGGCAACGGCCGCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009555.1\|WP_010114649.1\|362050_363886_+\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|238923
NZ_CP009555.1\|WP_010111458.1\|341659_342316_+\|cysteine-dioxygenase-family-protein	unknown	unknown	gnl\|CDD\|380416
NZ_CP009555.1\|WP_025989743.1\|352288_353620_+\|MdtA/MuxA-family-multidrug-efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|183194
NZ_CP009555.1\|WP_010114660.1\|360541_361171_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187554
NZ_CP009555.1\|WP_010102611.1\|337039_337213_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009555.1\|WP_045568029.1\|338509_340222_+\|iron-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224099
NZ_CP009555.1\|WP_010121166.1\|342827_343391_+\|NAD(P)H-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|223508
NZ_CP009555.1\|WP_010114672.1\|356744_360047_+\|nodulation-protein	unknown	unknown	gnl\|CDD\|182589
NZ_CP009555.1\|WP_010121162.1\|340232_341003_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|226361
NZ_CP009555.1\|WP_010114680.1\|348544_350503_+\|DUF839-domain-containing-protein	unknown	unknown	gnl\|CDD\|253386
NZ_CP009555.1\|WP_010114686.1\|346289_346931_-\|NAD(P)H-binding-protein	unknown	unknown	gnl\|CDD\|225462
NZ_CP009555.1\|WP_010114696.1\|337476_338520_+\|Fe(3+)-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270260
NZ_CP009555.1\|WP_010121164.1\|342478_342805_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009555.1\|WP_010114684.1\|347190_347649_-\|Rrf2-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224870
NZ_CP009555.1\|WP_010102593.1\|353633_356744_+\|MdtB/MuxB-family-multidrug-efflux-RND-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|182501
NZ_CP009555.1\|WP_010111460.1\|341045_341513_-\|Lrp/AsnC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224439
NZ_CP009555.1\|WP_025989744.1\|351044_351872_+\|IclR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224332
NZ_CP009555.1\|WP_010114647.1\|363919_365377_+\|HDOD-domain-containing-protein	unknown	unknown	gnl\|CDD\|370050
NZ_CP009555.1\|WP_025989742.1\|361304_361853_-\|peroxiredoxin	unknown	unknown	gnl\|CDD\|239315
NZ_CP009555.1\|WP_010114645.1\|365574_366357_-\|cytochrome-c4	unknown	unknown	gnl\|CDD\|225418

Protein	Function_ID	Function_description	E-value
NZ_CP009555.1\|WP_010114649.1\|362050_363886_+\|EAL-domain-containing-protein	gnl\|CDD\|238923	cd01948, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second messenger, cyclic di-GMP, and is a good candidate for a diguanylate phosphodiesterase function. Together with the GGDEF domain, EAL might be involved in regulating cell surface adhesiveness in bacteria.	7.54233e-105
NZ_CP009555.1\|WP_010111458.1\|341659_342316_+\|cysteine-dioxygenase-family-protein	gnl\|CDD\|380416	cd10548, cupin_CDO, cysteine dioxygenase, cupin domain. This family contains cysteine dioxygenase (CDO; EC 1.13.11.20), which catalyzes the conversion of cysteine to cysteine sulfinic acid, the first step in the biosynthesis of essential oxidized cysteine metabolites such as sulfate, hypotaurine, and taurine. CDO also plays an important role in the regulation of intracellular cysteine levels in mammals; CDO expression is altered in cancer cells, and abnormal or deficient CDO activity has been linked to Parkinson's disease, Alzheimer's disease, and rheumatoid arthritis. CDO is an iron-dependent thiol dioxygenase that uses molecular oxygen to oxidize the sulfhydryl group of cysteine to generate cysteine sulfinic acid. The CDO active site contains an amino acid-derived cofactor. These enzymes are found in prokaryotes as well as eukaryotes and belong to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold capable of homodimerization.	1.4368e-25
NZ_CP009555.1\|WP_025989743.1\|352288_353620_+\|MdtA/MuxA-family-multidrug-efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|183194	PRK11556, PRK11556, MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit.	2.92862e-136
NZ_CP009555.1\|WP_010114660.1\|360541_361171_+\|SDR-family-oxidoreductase	gnl\|CDD\|187554	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5. This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	1.75687e-49
NZ_CP009555.1\|WP_045568029.1\|338509_340222_+\|iron-ABC-transporter-permease	gnl\|CDD\|224099	COG1178, ThiP, ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism].	1.40001e-102
NZ_CP009555.1\|WP_010121166.1\|342827_343391_+\|NAD(P)H-dependent-oxidoreductase	gnl\|CDD\|223508	COG0431, COG0431, Predicted flavoprotein [General function prediction only].	7.24249e-27
NZ_CP009555.1\|WP_010114672.1\|356744_360047_+\|nodulation-protein	gnl\|CDD\|182589	PRK10614, PRK10614, multidrug efflux system subunit MdtC; Provisional.	0
NZ_CP009555.1\|WP_010121162.1\|340232_341003_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|226361	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism].	1.42887e-107
NZ_CP009555.1\|WP_010114680.1\|348544_350503_+\|DUF839-domain-containing-protein	gnl\|CDD\|253386	pfam05787, DUF839, Bacterial protein of unknown function (DUF839). This family consists of several bacterial proteins of unknown function that contain a predicted beta-propeller repeats.	2.0727e-06
NZ_CP009555.1\|WP_010114686.1\|346289_346931_-\|NAD(P)H-binding-protein	gnl\|CDD\|225462	COG2910, COG2910, Putative NADH-flavin reductase [General function prediction only].	3.49119e-74
NZ_CP009555.1\|WP_010114696.1\|337476_338520_+\|Fe(3+)-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270260	cd13542, PBP2_FutA1_ilke, Substrate binding domain of ferric iron-binding protein, a member of the type 2 periplasmic binding fold superfamily. FutA1 is the periplasmic component of an ABC-type iron transporter and serves as the primary receptor in Synerchosystis species. The periplasmic iron binding protein plays an essential role in the iron uptake pathway of Gram-negative pathogenic bacteria and is critical for survival of these pathogens within the host. After binding iron with high affinity, FutA1 interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The iron- and thiamine-binding proteins belong to the PBPI2 superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	2.90883e-155
NZ_CP009555.1\|WP_010114684.1\|347190_347649_-\|Rrf2-family-transcriptional-regulator	gnl\|CDD\|224870	COG1959, COG1959, Predicted transcriptional regulator [Transcription].	5.21917e-31
NZ_CP009555.1\|WP_010102593.1\|353633_356744_+\|MdtB/MuxB-family-multidrug-efflux-RND-transporter-permease-subunit	gnl\|CDD\|182501	PRK10503, PRK10503, MdtB/MuxB family multidrug efflux RND transporter permease subunit.	0
NZ_CP009555.1\|WP_010111460.1\|341045_341513_-\|Lrp/AsnC-family-transcriptional-regulator	gnl\|CDD\|224439	COG1522, Lrp, Transcriptional regulators [Transcription].	2.6458e-48
NZ_CP009555.1\|WP_025989744.1\|351044_351872_+\|IclR-family-transcriptional-regulator	gnl\|CDD\|224332	COG1414, IclR, Transcriptional regulator [Transcription].	3.73069e-51
NZ_CP009555.1\|WP_010114647.1\|363919_365377_+\|HDOD-domain-containing-protein	gnl\|CDD\|370050	pfam08668, HDOD, HDOD domain.	1.32453e-32
NZ_CP009555.1\|WP_025989742.1\|361304_361853_-\|peroxiredoxin	gnl\|CDD\|239315	cd03017, PRX_BCP, Peroxiredoxin (PRX) family, Bacterioferritin comigratory protein (BCP) subfamily; composed of thioredoxin-dependent thiol peroxidases, widely expressed in pathogenic bacteria, that protect cells against toxicity from reactive oxygen species by reducing and detoxifying hydroperoxides. The protein was named BCP based on its electrophoretic mobility before its function was known. BCP shows substrate selectivity toward fatty acid hydroperoxides rather than hydrogen peroxide or alkyl hydroperoxides. BCP contains the peroxidatic cysteine but appears not to possess a resolving cysteine (some sequences, not all, contain a second cysteine but its role is still unknown). Unlike other PRXs, BCP exists as a monomer. The plant homolog of BCP is PRX Q, which is expressed only in leaves and is cellularly localized in the chloroplasts and the guard cells of stomata. Also included in this subfamily is the fungal nuclear protein, Dot5p (for disrupter of telomere silencing protein 5), which functions as an alkyl-hydroperoxide reductase during post-diauxic growth.	1.71713e-47
NZ_CP009555.1\|WP_010114645.1\|365574_366357_-\|cytochrome-c4	gnl\|CDD\|225418	COG2863, COG2863, Cytochrome c553 [Energy production and conversion].	8.76196e-20

>NZ_CP009555.1|WP_010114684.1|347190_347649_-|Rrf2-family-transcriptional-regulator
MNTSSRFAFAVHALALLSLQEGVPLSSDMIAGSVNTNPALIRRLLSMLAAAGLTTSQLGAGGGALLAREPSSITLLDVYRAVDDAQLFALHRETPNPACLVGRHIQGVLTDYIGDAQRAMEASLATRTLADVTADVLRSEASGQPGGAQASG
>NZ_CP009555.1|WP_010114686.1|346289_346931_-|NAD(P)H-binding-protein
MTQRTLKIALFGATGMIGSRIAAEAARRGHQVTALSRRPAAGAGNVTAKAADLFDAASIAAALEGQDVVASAYGPKQEDASKVVDVAKALVEGARKAGVKRVVVVGGAGTLEVAPGKQLVDTEGFPDAYKAVALAHRDAYDYLTTVQDLDWTFFSPAALIAPGERTGTFRTGAGKLIVDADGNSKISAEDYAVAFVDEIEQNHFVRQVATVAY
>NZ_CP009555.1|WP_010121166.1|342827_343391_+|NAD(P)H-dependent-oxidoreductase
MHDTMRTIDILAISGSLRATSINTAVLQAAAALAPAGMRVCLFRRLGEFPLFNPDFDDPMPEPVQAFRDRLNTANGVLIASPEYAHGVTGVMKNALDWVVGCEAMVCKPVAVLNASPRATHADAALKETLAVMSASIVADASVALPILGAKLDAEGIASHPEFASVLSAALRALQRDIGIRDASAAN
>NZ_CP009555.1|WP_010121164.1|342478_342805_+|hypothetical-protein
MPFETAIENARPTHRLDPAAFAVKKNLTRLAAAVPSARYGEIGPIGHVRRQWRTRFAFGAEKAPIASAATVLIVRVMASRPKNETALANASTGATRPLVADRAPGPPA
>NZ_CP009555.1|WP_010111458.1|341659_342316_+|cysteine-dioxygenase-family-protein
MNHAASLIPQAPDAPSNQRERERATSAPRRALAAPTPIERFCARIDAAFDALANESAPSRHPAFARELRAALAQAVAAPGLLTPAQRESGAAGYRRHLLAADPLGRYAVVSLVWRPGQWSPVHGHHTWCGYAVLEGELTEIVYGWNDAACRAIDARKRARPTGAASYVCAGRAAIHRLGHAGAPADAPAISLHVYGVAGEQVATHVNDVVAVDAGPYA
>NZ_CP009555.1|WP_010111460.1|341045_341513_-|Lrp/AsnC-family-transcriptional-regulator
MDAIDRKLLELLQEDATLPIAELAQRVNLSQTPCWKRIQRLKETGTIRAQVALCDPRKLGVGTTVFVAVRTNQHTEEWAARFTQVVRDMPEVVEVYRMSGETDYLLRVVVADIDDYDRIYKKLIRSVPLFDVSSSFAMEQIKYSTALPVRDGVAG
>NZ_CP009555.1|WP_010121162.1|340232_341003_+|ABC-transporter-ATP-binding-protein
MLLELNAVTLAYDTPRGRRTIVDRLNLALERGAIGCLLGASGCGKTTVLRAIAGFEPVRAGEIVLAGAALASRDADVPPEKRRVGMMFQDYALFPHLSAQQNVEFGLRRAPKAQRRARAAQMLELVGLADAANAYPHELSGGQQQRIALARALAPSPELLLLDEPFSNLDVDTRERLAFEVRDILKAAGHTALFVTHNQAEAFALADRIGVIDDGRLAQWDTPYNLYHHPASEFVADFVRRDALADERRRALERGR
>NZ_CP009555.1|WP_045568029.1|338509_340222_+|iron-ABC-transporter-permease
MTTDAAVARRPLARVRAGVGERLRALAPRVAARGWLAAAAAIAALVATPLAALAWSALGADLSHWRHLAEFVLPQATANTLALLAGVGAIVACVGTGAAWLVTAYDFPGRRTLAWALLLPLAVPSYIVAFAYLDLLHPIGPVQSALRWMLGFDSPREFRLPDLRSLPGAIAVLGFVLYPYVYLCTRAMFVTQSASLIEAARTLGAGRVETFLRVVLPLARPAIAVGVSLALLETLNDVGASEFLGVQTLTVSVYTTWVTRSDLASAAQIALAMLAIVFGAIALERYGRRRERYAHGRRMRAIEPRRLRGAAAVGAAALGWLPVVAGFGAPAAYLVHETAKRLHLVGGVSGQLLASLANTLAVALAATVVTLACGIVVAWATRRARDSARVQPSRVCARLASVGYAVPGTVLAIGLLAPLALADRAIAAAFDRDGLVLMGSAAALVVAYAIRFLAIPAGSIEAGLARIPASLEQASRTLGESAGMTLWRVHLPLLRPALGASALLVFVDAMKELPATLLLRPLNFDTLATWLYAEAARGTYEEGAVAALAIVVAGLAPVIVLARTQLKSGS
>NZ_CP009555.1|WP_010114696.1|337476_338520_+|Fe(3+)-ABC-transporter-substrate-binding-protein
MFLKQARPLLRTLAFAFALAAVAPAAQAANEVNLYTTREPKLIQPLIDAFTKQSGIAVNTVFVKDGLLERVKAEGARSPADVLMTVDIGNLLDLVDGGLTQPVRSQPLDDAIPANLRSARGDWYALSLRDRVLYVDKNMKLDAITYESLADPKWKGKVCIRSGQHPYNTALVAAMIAHDGEAATEQWLRGVKANLARKATGGDRDVARDILGGICDVGLANAYYVGHMKHAEPGTDARKWGDAIKVVRPTFANAKSGGTHVNVSGAAVAKHAPNKDNAVKLLEYLASPPAQALYAQANYEYPVRAGVTLDPVIAGFGPLKVDPLPLVEIAKHRRRASQLVDKVGFDN
>NZ_CP009555.1|WP_010102611.1|337039_337213_-|hypothetical-protein
MNDPRSKKNPVFGVAILIVVAVVLVIGTILYNAISQKHEYDEAHPQGASASAASAHG
>NZ_CP009555.1|WP_010114680.1|348544_350503_+|DUF839-domain-containing-protein
MPALPNPSRRHALKILASAPMLPLSGVALPALLSGCGGDDNVAAAPPAASFAAAAFAPMAAPTLADPAAMATTTVGSTLSVSFSDGSTRNYKLAYRPFFVTGDQVPDGKGGTILAGGYYDINNRPIVDATVAGRERQFFSDCPDGSSLLTLKDAKVPGVKGNTVFAVVQFEYATRSQNGDSAYGQLPSPIAVLTLDQDPATGALKLVKYHNVDTSAAHGLWITCGASLSPWNTHLSSEEYEPDATKAATDAQFKAFSRNTFGSDTAANPYHYGHLPEIVVNPDGTGAVKKHYCLGRISHELIHVMPDQRTVMMGDDATNGGLFMFVADKPADLSAGTLYVGKWTQTSAAGAGAATLTWIRLGHATSAEIEALANRLKASDIMDVATTDPADPTFAKIHFGGKFNWIRVKPGMELAAAFLETHRYAALAGGSMAFTKLEGTTANAKDKVVYMAMSRLETSMVKGNAVSRDVALDKKIAAGAVYALGMRGGQRDTSGAAIDSEWVPVDMSAPAALVGEDLAAADALGNLANPDKIANPDNLKFSEKLRTLFIGEDSGMHVNNFLWAYNVDTKKLSRVLSCPAGAESTGLHAVDEINGWTYIMSNFQHAGDWESPLHDKVKGTLDPLVRANYKDRFGASVGYLTAEPAAIQLKKA
>NZ_CP009555.1|WP_025989744.1|351044_351872_+|IclR-family-transcriptional-regulator
MTTRSNAQPVSREREATSDEITALARGLAVLRRIAASDAPVSNRELAELTGIPKPTVSRITATLVSAGFLFQLPDSERFVLTASVLELSNGFLRNFDIRARSRPFLVELAEKTSLSVHLAVRDRLDMVAIDVIRPRSAVLVTRLETGSRMDIARTAVGRAYLAALEDDARRELIGALQAAAGDDWPFVVARLNSALSDIAQNGYAIAIGEWREELNAIAAGFVAPTGQRYAVNCGGSAHQCTPDFLRSVAVPALRECIAKITREIGGSAWPDRAR
>NZ_CP009555.1|WP_025989743.1|352288_353620_+|MdtA/MuxA-family-multidrug-efflux-RND-transporter-periplasmic-adaptor-subunit
MDNQEKPAPRSPAHPPSGPDAPRSHRKLIAFCTLAVVAIGGLLWWHPWKDGASGASGATAASQPGGARKRGGPAALANLPQPVQVAAAARGEMPIVLNALGTVTPLANVAVRTQLSGYLQSVSFQEGQIVRKGDVLAQIDPRPYQITLANAQGALARDEALLATARLDLQRYQTLVAQDSIAKQTADTQASLVKQYEGTVQIDRAAIDSAKLNLTYARITAPVSGRVGLRQVDPGNYVTPSDTNGIVVITQLQPMSVIFTTSEDNLPSILKQVNAGSKLSITAYNRNNTTPLETGVLDTLDNQIDTSTGTVKLRATFENKSNLLFPNQFVNTRLLVDTMRDATIVPTSAVLTGSIGQFVYVVKPDNTVTVRKVKPGPVDGERTSIVDGLAVGERVVTDGSDRLREGSAITIPAEQPKHASGAKGASAASGAHKRRAASQAQSQ
>NZ_CP009555.1|WP_010102593.1|353633_356744_+|MdtB/MuxB-family-multidrug-efflux-RND-transporter-permease-subunit
MNPSRVFILRPVGTALLMAAILLAGLVALRFLPLAALPEVDYPTIQVQTFYPGASPEVMTSSVTAPLERQFGQMPSLNQMSSQSSAGASVITLQFSLDLPLDVAEQEVQAAINAAGNLLPSDLPAPPIYAKVNPADAPVITLAVTSKTLPLTQVQDLADTRLAMKISQVAGVGLVSLSGGNRPAVRIQANPLALASYGLNLDDLRTTISNLNVNTPKGNFDGPTRAYTINANDQLTSAEQYQDAVVAYKNGRPVMLTDVAKIVAGSENTKLGAWVDSEPAIILNVQRQPGANVIQTVDNIKAILPKLQESLPAALDVQIVTDRTTMIRAAVRDVQFELGLAVALVVLVMYLFLANVYATIIPSLSVPLSLIGTLAVMYLSGFSLNNLSLMALTIATGFVVDDAIVMIENIARYVEEGDSALEAALKGSKQIGFTIISLTVSLIAVLIPLLFMGDVVGRLFHEFAITLAVTIVISAIVSLTLVPMMCAKLLRHTPPPESHRFEAKVHVLIDRVIARYGIALQWVLNRQRSTLVVALLTLALTALLYVEIPKGFFPTQDTGVIQAITQAPQAVSYGAMAERQQALAAEILKHPDVESLTSFIGVDGSNITLNSGRMLINLKPRDERSETASDVIRSLQQQVSNIPGISLYMQPVQDLTIDSTVSPTQYQFMLTSPNPDEFTTWVPKLVERLKKEPSLADVATDLQNNGKSVYIEIDRATAARFGITPATVDNALYDAYGQRIVSTIFTQSNQYRVILESEPQMQHYTESLNGIYLPSAGSGQVPLSTIATFHERPAPLLVSHLSQFPSTTISFNLAPGASLGEAVKAIDAAERDVGLPASFQTRFQGAALAFQASLSNQLFLILAAIITMYIVLGVLYESYIHPITILSTLPSAGVGALLALMITGHDLDIIGIIGIVLLIGIVKKNAIMMIDFALEAERVEGKPPREAIYQACLLRFRPILMTTLAALLGAVPLIVGSGAGSELRQPLGIAIAGGLIVSQVLTLFTTPVIYLGFDALARRIRGFFDRSGSTAAHPDA
>NZ_CP009555.1|WP_010114672.1|356744_360047_+|nodulation-protein
MNLSRPFITRPVATTLLALGIALAGLFAFVQLPVSPLPQVDFPTIMVQASLPGASPETVATSVTSPLERHLGSIADVSEMTSMSSVGNARIVLQFNLNRDIDGAARDVQAAINAARADLPASLKSNPTYRKVNPADSPIMVVSLTSKTASPAKLYDAASTVLQQSLSQIDGIGQVSLSGSANPAVRVELEPQALFHYGIGLEDVRAALSSANANSPKGAIEFGPNRYQLYTNDQASQASQYKNLVIAYRNHAAVSLADVSTVVDSVEDLRNLGLANGERAVLVILYRSPGANIIETIDRVKAALPQLTAALPADIKVSPVLDRSRTIRASLADTEHTLLIAMSLVVMVVFLFLRNWRATLIPSVAVPISIIGTFGAMYLLGFSLNNLSLMALIVATGFVVDDAIVVLENISRHIENGTPRLQAAFDGAREVGFTVLSISLSLVAVFLPILLMGGIVGRLFREFAITLSLAIGVSLVVSLTLTPMMCARLLPEAHDPRDEGRFARWLERGFERMQRGYERTLSWALRHPRTILMTLVATIALNVFLYIVVPKGFFPQQDTGLMVGGIQADQTTSFQAMKLKFTEMMRIVSANPNVANVAGFTGGAQTNSGFMFVALKDKPGRKLSADQVIQQLRPQLADVAGARTFLQAAQDIRMGGRQSNAQYQFTLLGDSTAELYKWGPILTEALQKRAELADVNSDQQQGGLEAMVTIDRATAARLGIKPAQIDNTLYDAFGQRQVSTIYNPLNQYHVVMEVAPQYWQSPEMLKQVYISTSGGSASGAQTTNAAAGTYVATSAGTSAAGTSAQSAAAIAADSARNQALNSIASSGKSSASSGAAVSTSKSTMVPLSAIASFGPSTTPLSVNHQGLFVATTISFNLPPGVSLSKATQAIYQTMAEVGVPPTIQGSFQGTAQAFQQSLKDQPILILAALAAVYIVLGILYESYIHPITILSTLPSAGVGALLGLLLFKTEFSIIALIGVILLIGIVKKNAIMMVDFAIDASRQGKSSFDAIHEACLLRFRPIMMTTMAALLGALPLAFGRGDGAELRAPLGIAIAGGLIVSQMLTLYTTPVVYLYMDRLRVWAEKRRNRGASGGAAIAGE
>NZ_CP009555.1|WP_010114660.1|360541_361171_+|SDR-family-oxidoreductase
MSMKVLLIGASGRTGRALADLLLKQQDFEVTALVRRPDYALPGAKVVVADLEDDFSSAFSGITHAIYAAGSAESEGAAEEERIDRDAVARAAKYAKAHNVQKLVVISSLSAYWPERSPEFLRHYSQMKREGDDRVIASGIDYVILRPGPLSDDPGIGKIALTEERLDNAPPVARQDVAWAAIEAIKLGISKKTIGFVGGGVPIEQALRA
>NZ_CP009555.1|WP_025989742.1|361304_361853_-|peroxiredoxin
MNRKLAMGAAAALFALYTVAAHAVLKVGDAAPEFSAQASLGGKTYTYSLADALKKGPVVLYFYPAAFTTGCTIEAHAFADAVDAYKQYGATVIGVSADDIGTLTKFSVSECRSKFPVAADPDAKIIREYDAKLPAISKANRVSYVISPEGKILYGYTSLSPDKHVENTLNAVKAWAASHKQP
>NZ_CP009555.1|WP_010114649.1|362050_363886_+|EAL-domain-containing-protein
MEAIRNKTPRKGSWRAALHKLRRFAWSGGALMPARAGTPRADDTVRSWLEQTVGAVDFLAHVDRDLRFLYVSDASLRFIGYHRDYLHTLTLRDLIPEQDTATLDGLLARASETGDVEKATLCLVKSLTYPLDVEVRAVRSRHHGVDGFAIAAFDVSSWRAIEARLTYELHHDPMTGLDNLSALLPALMRAQQTADEGGGCTALILLDLDDYQRINRALGYDAGDALLRDTAQRLQRLATRGERLARVASDKFAVMLSAPTRVAAIDAAEALARQLQTAVQQPYAHGGQAVHLSASAGIAIYPDARAASKHAQHHSPLLRRADRALAQAKAAGGNALAFHQPTDDPADAERLKLEADLYNGVRNGEFSLHFQPITKSHTGAVVGVEALIRWHHPVHGLVAPATFIPLAESIGLINYLGNWVLKAACMQLVSWDRQGIALQYVAVNVSPQQFRDPRFTQSVRDAIKLTGIDPCRIVLEITESLLMHDPNHAKTLLEEVTELGIRFAVDDFGTGYSSLAYLQSFPLAKLKIDRSFVENLLTSRNDRAIVSAVVGLAQTLELELVAEGVETEAQRTLLTEMGCNHIQGWLVCQALPSEELAQRFEAQELYLHETA
>NZ_CP009555.1|WP_010114647.1|363919_365377_+|HDOD-domain-containing-protein
MPITAQLPRTALLDKLWARMNERGDFPLLSDALRATMAAMKNDDLDFTALVRVVLSDFALTQKVLRLANSAMYMAFGGNITTVTRALMVLGMDAVGHLVVGLKLVDHFHQSAPRRIDAKLELNRALLSGCVARKLTEHVDLRAGEEAVVCTLMRQVGKLLVVCYLDAEWEEIRRRAAEHDDDDEAACRAVLGVGFDEIGLEAASRWRLPELIRAGMTRFDANDGAPHDVQWLRAVSHCSTEVAAALTSMHAQQRDARIAALAHRFHGVLGADADELAEIAASLSREETSDTVMREIVELRANADKIARGASNPQACLEAGLADLRALPSEHVLGPVLALASESVLAGLAFTRTVMFVRRDDGTFAARLGFGPDVDAQLERLRFHETFEPDVFHLAITNSVGIFIENARDPKMVKRLPAWYLDAFDDSRAFVLLPVVAEQNAVALLYGDWAAGQPARKITQQEMGVLNELAAELGRFFRGAQGDDK
>NZ_CP009555.1|WP_010114645.1|365574_366357_-|cytochrome-c4
MSTERLFSIRNRWFTVSVGLTLFAVVASVLIGFVWLPSVQKDAQFQGIWNAICSAAGVPRAWLPSQPEPATVKTSAVVVTPQMMTRTDSLSIGRGATLAMRCTMCHGARGMSDANSPNLAGQYAAVIYKQLKDFQAGARTNAVMAPMVVNLSDQDMRDLAAFYSYLPRAAAKPAANPPKIVASGAPMRNIAPCASCHGGMDNKVGGPWLEGEPEVYIKAQLQAFASGARHNDISEQMRNVARQMTPDEIAAAARYYAGRP

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

7432 : 87969

uncultured_Caudovirales_phage(23.08%)

plate,transposase,tRNA,coat

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010115800.1\|7432_9142_+\|tRNA	glutamine--tRNA ligase/YqeY domain fusion protein	A0A222YZ70	Escherichia_phage	1.0e-183	56.5
WP_010115802.1\|9380_9857_-	NUDIX domain-containing protein	A0A2I6PFL2	Proteus_phage	1.6e-22	42.8
WP_010104311.1\|9875_10262_-	hypothetical protein	NA	NA	NA	NA
WP_010115804.1\|10490_12596_-	glycoside hydrolase family 3 protein	NA	NA	NA	NA
WP_025989856.1\|12697_13558_+	M15 family metallopeptidase	NA	NA	NA	NA
WP_010115807.1\|13582_14860_+	glycoside hydrolase family 65 protein	NA	NA	NA	NA
WP_010115809.1\|14898_16086_+	MFS transporter	NA	NA	NA	NA
WP_010115812.1\|16082_17171_+	DegT/DnrJ/EryC1/StrS family aminotransferase	A0A2D2W2B8	Stenotrophomonas_phage	4.8e-14	27.5
WP_010115814.1\|17167_17371_-	hypothetical protein	NA	NA	NA	NA
WP_025989857.1\|17522_18869_-	c-type cytochrome	NA	NA	NA	NA
WP_010104319.1\|19101_20685_+	acid phosphatase	NA	NA	NA	NA
WP_010115818.1\|21042_22236_+	trans-2-enoyl-CoA reductase family protein	NA	NA	NA	NA
WP_010115820.1\|22305_22563_-	trans-aconitate methyltransferase	NA	NA	NA	NA
WP_038802563.1\|22570_23203_-	response regulator transcription factor	NA	NA	NA	NA
WP_025989858.1\|23203_25279_-	response regulator	A0A1V0SGR3	Hokovirus	5.9e-13	26.3
WP_010115833.1\|25692_26658_-\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_010115835.1\|26673_29082_-	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
WP_025989859.1\|29126_29966_-	molecular chaperone	NA	NA	NA	NA
WP_038800852.1\|29983_30508_-\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_010104331.1\|30590_31151_-\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_025989860.1\|31203_31749_-\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_010115842.1\|32011_32212_-	hypothetical protein	NA	NA	NA	NA
WP_157135620.1\|32352_32502_-	hypothetical protein	NA	NA	NA	NA
WP_010104335.1\|32578_33472_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_010115844.1\|33918_35154_+	MFS transporter	NA	NA	NA	NA
WP_010115846.1\|35199_36126_+	amidohydrolase family protein	NA	NA	NA	NA
WP_025989861.1\|36598_36880_+	H-NS histone family protein	NA	NA	NA	NA
WP_010104341.1\|37330_37594_-	hypothetical protein	NA	NA	NA	NA
WP_025989862.1\|38243_38897_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_010115854.1\|39215_40166_-	LysR family transcriptional regulator	A0A2H4J8I9	uncultured_Caudovirales_phage	3.2e-06	37.3
WP_010115856.1\|40310_41159_+	acyl-CoA dehydrogenase	NA	NA	NA	NA
WP_010115858.1\|41183_42344_+	acyl-CoA/acyl-ACP dehydrogenase	NA	NA	NA	NA
WP_010115860.1\|42356_43535_+	CoA transferase	NA	NA	NA	NA
WP_010104356.1\|43616_44999_+	MFS transporter	NA	NA	NA	NA
WP_025989863.1\|45379_46219_-	CoA ester lyase	NA	NA	NA	NA
WP_010122797.1\|47362_48676_-	Nramp family divalent metal transporter	NA	NA	NA	NA
WP_045568013.1\|49405_50368_-	hypothetical protein	NA	NA	NA	NA
WP_124072275.1\|50503_50818_-	hypothetical protein	NA	NA	NA	NA
WP_081470019.1\|51912_52599_-	hypothetical protein	NA	NA	NA	NA
WP_157135687.1\|52860_53970_-	hypothetical protein	NA	NA	NA	NA
WP_010111647.1\|54194_54542_-	hypothetical protein	NA	NA	NA	NA
WP_045568267.1\|54663_55566_-	hypothetical protein	NA	NA	NA	NA
WP_010104369.1\|55679_58529_-	hypothetical protein	NA	NA	NA	NA
WP_010115868.1\|58525_59401_-	hypothetical protein	NA	NA	NA	NA
WP_025989864.1\|59402_62243_-	type VI secretion system tip protein VgrG	NA	NA	NA	NA
WP_010104373.1\|62254_62809_-	hypothetical protein	NA	NA	NA	NA
WP_124072276.1\|62845_63073_-	hypothetical protein	NA	NA	NA	NA
WP_010104375.1\|63159_63654_-	hypothetical protein	NA	NA	NA	NA
WP_045568014.1\|63631_66967_-	type VI secretion system tip protein VgrG	A0A2H4JCD4	uncultured_Caudovirales_phage	2.6e-10	29.5
WP_038801968.1\|67075_69484_-	DUF2235 domain-containing protein	NA	NA	NA	NA
WP_010104384.1\|69480_70080_-	DUF3304 domain-containing protein	NA	NA	NA	NA
WP_025989866.1\|70076_70655_-	DUF3304 domain-containing protein	NA	NA	NA	NA
WP_010115877.1\|70767_71604_-	DUF4123 domain-containing protein	NA	NA	NA	NA
WP_010115878.1\|71606_74405_-	type VI secretion system tip protein VgrG	A0A2H4JCD4	uncultured_Caudovirales_phage	8.2e-26	23.6
WP_010115879.1\|74921_75188_+	PAAR domain-containing protein	NA	NA	NA	NA
WP_045568268.1\|75211_76618_+	hypothetical protein	NA	NA	NA	NA
WP_010122528.1\|76697_78548_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_085970897.1\|78833_79968_+\|transposase	IS3 family transposase	A0A1P8CWQ3	Bacillus_phage	4.5e-15	29.9
WP_081470033.1\|80344_81064_+	type III secretion system effector phosphothreonine lyase	NA	NA	NA	NA
WP_107950886.1\|81297_82284_-	helix-turn-helix domain-containing protein	E9P643	Wolbachia_endosymbiont_wVitB_of_Nasonia_vitripennis_phage	4.8e-98	66.0
WP_010122519.1\|82421_84044_-\|transposase	IS66 family transposase	A0A218MNE7	uncultured_virus	1.9e-54	31.8
WP_010122518.1\|84143_84497_-	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	6.3e-16	39.8
WP_010122516.1\|84496_84970_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_010112332.1\|85503_86421_+	LysR family transcriptional regulator	Q6JIH3	Burkholderia_virus	6.1e-71	43.3
WP_010112330.1\|86616_87969_+	MFS transporter	Q6JIH2	Burkholderia_virus	1.0e-98	48.6

DBSCAN-SWA_2

116525 : 201817

Burkholderia_virus(90.62%)

tail,integrase,head,capsid,terminase,holin,transposase,portal

attL 141974:142019|attR 198378:198423

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_038802199.1\|116525_117926_+\|integrase	integrase family protein	NA	NA	NA	NA
WP_144411686.1\|118199_119099_+	hypothetical protein	NA	NA	NA	NA
WP_081470040.1\|119909_120566_+	pentapeptide repeat-containing protein	NA	NA	NA	NA
WP_081470039.1\|120893_121598_+	nucleotidyltransferase domain-containing protein	NA	NA	NA	NA
WP_124072278.1\|121587_121938_+	hypothetical protein	NA	NA	NA	NA
WP_107950866.1\|122030_123230_+\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	1.2e-42	42.7
WP_025990584.1\|124038_124353_+	hypothetical protein	NA	NA	NA	NA
WP_124072279.1\|124366_124708_+	hypothetical protein	NA	NA	NA	NA
WP_124072280.1\|125319_126558_-	hypothetical protein	NA	NA	NA	NA
WP_010122736.1\|127153_128314_-	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA
WP_010122737.1\|128315_129722_-	hypothetical protein	NA	NA	NA	NA
WP_038802202.1\|129718_130264_-	hypothetical protein	NA	NA	NA	NA
WP_124072281.1\|130665_132000_+	hypothetical protein	NA	NA	NA	NA
WP_010122741.1\|132107_133559_+	hypothetical protein	NA	NA	NA	NA
WP_124072282.1\|133589_135359_-	DEAD/DEAH box helicase	NA	NA	NA	NA
WP_085970860.1\|135417_136628_-\|transposase	IS3 family transposase	A0A1B0Z042	Pseudomonas_phage	4.0e-102	64.8
WP_082094580.1\|136706_137312_-	UvrD-helicase domain-containing protein	NA	NA	NA	NA
WP_010121254.1\|137565_137904_+	H-NS histone family protein	NA	NA	NA	NA
WP_081470000.1\|138051_138243_+	hypothetical protein	NA	NA	NA	NA
WP_082094581.1\|139189_140791_-	DUF3987 domain-containing protein	NA	NA	NA	NA
WP_010121256.1\|140950_141721_-	hypothetical protein	NA	NA	NA	NA
141974:142019	attL	NA	NA	NA	NA
WP_010121261.1\|142507_143176_-	DUF159 family protein	Q8W6R8	Burkholderia_virus	4.1e-125	92.8
WP_025990441.1\|143260_143902_+	hypothetical protein	Q8W6R9	Burkholderia_virus	1.3e-107	89.7
WP_025990442.1\|144031_145126_-	DUF3396 domain-containing protein	Q8W6S0	Burkholderia_virus	5.2e-202	95.5
WP_010109969.1\|145153_145888_-	VRR-NUC domain-containing protein	Q8W6S1	Burkholderia_virus	7.0e-134	96.3
WP_010121267.1\|145884_146445_-	hypothetical protein	A4JX23	Burkholderia_virus	1.8e-97	93.5
WP_081470002.1\|146640_147540_-	hypothetical protein	A4JX22	Burkholderia_virus	4.4e-130	83.3
WP_010121271.1\|147601_148144_-	lysozyme	Q8W6S5	Burkholderia_virus	1.9e-72	87.2
WP_025990443.1\|148143_148641_-	lysozyme	A4JX20	Burkholderia_virus	3.1e-69	79.5
WP_025990444.1\|148633_148846_-\|holin	holin	A4JX19	Burkholderia_virus	1.3e-29	100.0
WP_081470003.1\|148888_149605_-	hypothetical protein	A4JX18	Burkholderia_virus	2.0e-125	90.8
WP_010121280.1\|149912_153218_-	host specificity protein J	Q8W6T0	Burkholderia_virus	0.0e+00	94.5
WP_025990446.1\|153214_153799_-\|tail	tail assembly protein	Q8W6T1	Burkholderia_virus	2.5e-94	93.3
WP_010109982.1\|153795_154548_-	C40 family peptidase	Q6JIL4	Burkholderia_virus	4.2e-134	89.2
WP_010121284.1\|154597_155281_-\|tail	phage minor tail protein L	Q6JIL5	Burkholderia_virus	2.8e-129	95.2
WP_010121286.1\|155277_156663_-\|tail	tail fiber domain-containing protein	A4JX12	Burkholderia_virus	2.9e-221	81.0
WP_010121288.1\|156671_157010_-\|tail	phage tail protein	Q8W6T5	Burkholderia_virus	7.8e-56	92.0
WP_010121289.1\|157006_161071_-\|tail	phage tail tape measure protein	Q6JIL8	Burkholderia_virus	0.0e+00	84.6
WP_010109990.1\|161084_161369_-	DUF4035 domain-containing protein	Q6JIL9	Burkholderia_virus	3.5e-41	93.6
WP_025990447.1\|161368_161833_-\|tail	tail assembly protein	A4JX08	Burkholderia_virus	5.5e-76	90.3
WP_025990448.1\|161860_162316_-	hypothetical protein	A4JX07	Burkholderia_virus	8.5e-74	94.0
WP_010121292.1\|162379_162727_-	DUF3168 domain-containing protein	Q6JIM2	Burkholderia_virus	4.0e-55	93.0
WP_009901139.1\|162723_163146_-	HK97 gp10 family phage protein	Q6JIM3	Burkholderia_virus	5.5e-67	96.4
WP_010121293.1\|163138_163465_-\|head	phage head closure protein	Q8W6U2	Burkholderia_virus	1.6e-53	95.4
WP_010121294.1\|163464_164031_-	hypothetical protein	Q8W6U3	Burkholderia_virus	1.4e-94	92.0
WP_010121295.1\|164037_164223_-	hypothetical protein	Q8W6U4	Burkholderia_virus	9.2e-19	75.4
WP_010121296.1\|164282_165590_-\|capsid	phage major capsid protein	A4JX01	Burkholderia_virus	1.1e-201	86.2
WP_010121298.1\|165691_166660_-	S49 family peptidase	A4JX00	Burkholderia_virus	5.2e-161	93.8
WP_025990449.1\|166656_167916_-\|portal	phage portal protein	Q8W6U7	Burkholderia_virus	9.8e-229	94.0
WP_010121302.1\|167919_168105_-	hypothetical protein	Q8W6U8	Burkholderia_virus	8.6e-17	83.6
WP_010121303.1\|168101_169814_-\|terminase	terminase large subunit	Q8W6U9	Burkholderia_virus	0.0e+00	95.8
WP_025990450.1\|169823_170309_-\|terminase	phage terminase small subunit P27 family	Q8W6V0	Burkholderia_virus	7.4e-84	94.4
WP_025990451.1\|170457_170814_-	HNH endonuclease	Q8W6N0	Burkholderia_virus	1.1e-60	93.2
WP_004549735.1\|170874_171132_+	type II toxin-antitoxin system RelE/ParE family toxin	Q8W6N1	Burkholderia_virus	2.4e-41	100.0
WP_004548635.1\|171128_171515_+	helix-turn-helix transcriptional regulator	Q8W6N2	Burkholderia_virus	1.4e-64	99.2
WP_010121307.1\|172946_174146_+	nucleoside 2-deoxyribosyltransferase	NA	NA	NA	NA
WP_010121309.1\|174142_174739_+	7-cyano-7-deazaguanine synthase	NA	NA	NA	NA
WP_157135679.1\|174725_175388_+	hypothetical protein	NA	NA	NA	NA
WP_010121313.1\|175403_176195_-	hypothetical protein	NA	NA	NA	NA
WP_010121314.1\|176568_177216_-	hypothetical protein	Q8W6N4	Burkholderia_virus	1.2e-102	91.1
WP_025990452.1\|177224_177485_-	hypothetical protein	Q8W6N5	Burkholderia_virus	1.9e-38	84.9
WP_124072284.1\|177460_177769_-	hypothetical protein	NA	NA	NA	NA
WP_010121320.1\|177765_178188_-	DUF1364 family protein	Q6JIF7	Burkholderia_virus	4.2e-51	74.5
WP_025990453.1\|178184_178559_-	hypothetical protein	A4JX57	Burkholderia_virus	6.8e-53	84.7
WP_010121324.1\|178555_179059_-	DUF1064 domain-containing protein	A4JX56	Burkholderia_virus	1.0e-75	87.4
WP_038802137.1\|179103_180096_-	hypothetical protein	Q6JIG0	Burkholderia_virus	7.1e-174	97.6
WP_010110014.1\|180249_180510_-	helix-turn-helix domain-containing protein	Q6JIG2	Burkholderia_virus	1.3e-34	87.2
WP_010121328.1\|180506_181328_-	hypothetical protein	Q8W6P2	Burkholderia_virus	3.5e-142	97.4
WP_010121330.1\|181362_182325_-	phosphoadenosine phosphosulfate reductase family protein	A9YWY5	Burkholderia_phage	2.0e-165	96.5
WP_085970892.1\|182321_183554_-	DNA cytosine methyltransferase	Q6J1P4	Burkholderia_virus	4.3e-112	53.8
WP_010110021.1\|183564_184005_-	hypothetical protein	Q8W6P5	Burkholderia_virus	1.0e-68	89.0
WP_009901179.1\|184188_184425_+	hypothetical protein	NA	NA	NA	NA
WP_107950890.1\|184676_184916_+	hypothetical protein	NA	NA	NA	NA
WP_038801590.1\|184922_185237_-	transcriptional regulator	Q6JIG9	Burkholderia_virus	2.3e-41	82.2
WP_010110024.1\|185300_185702_+	hypothetical protein	Q6JIH0	Burkholderia_virus	8.9e-59	89.5
WP_010110026.1\|186047_187337_-	MFS transporter	Q6JIH2	Burkholderia_virus	8.3e-215	91.1
WP_025990457.1\|187491_188385_-	LysR family transcriptional regulator	Q6JIH3	Burkholderia_virus	5.8e-159	92.3
WP_010110028.1\|188771_188999_+	hypothetical protein	A4JX40	Burkholderia_virus	1.2e-31	88.0
WP_010121341.1\|189162_189324_+	hypothetical protein	NA	NA	NA	NA
WP_038802134.1\|189352_189589_+	hypothetical protein	NA	NA	NA	NA
WP_010121343.1\|189634_189850_+	hypothetical protein	Q6JIH9	Burkholderia_virus	1.1e-28	80.3
WP_025990459.1\|190366_191005_-	hypothetical protein	A4JX33	Burkholderia_virus	6.5e-11	56.3
WP_162486564.1\|191095_191404_+	hypothetical protein	Q6JII2	Burkholderia_virus	2.2e-41	87.3
WP_010121349.1\|191400_192213_+	prohibitin family protein	Q8W6Q7	Burkholderia_virus	1.7e-141	95.9
WP_010121351.1\|192471_192633_+	hypothetical protein	Q8W6Q8	Burkholderia_virus	7.3e-12	83.0
WP_157135680.1\|194062_194221_+	hypothetical protein	NA	NA	NA	NA
WP_124072285.1\|194213_194453_+	hypothetical protein	Q6JIJ1	Burkholderia_virus	3.1e-27	78.4
WP_010121356.1\|194449_194710_+	hypothetical protein	A9YWU5	Burkholderia_phage	3.8e-34	81.2
WP_107950822.1\|194702_194987_+	hypothetical protein	NA	NA	NA	NA
WP_010121358.1\|194983_196027_+	phage Gp37/Gp68 family protein	Q8W6R4	Burkholderia_virus	6.4e-133	66.2
WP_010121362.1\|196464_196674_-	hypothetical protein	Q6JIJ5	Burkholderia_virus	2.4e-31	91.3
WP_025990460.1\|196755_196980_-	hypothetical protein	Q6JIJ6	Burkholderia_virus	4.7e-33	89.2
WP_010121366.1\|197273_198353_+\|integrase	site-specific integrase	A0A1S5NNJ1	Burkholderia_phage	4.5e-57	38.2
WP_010121369.1\|198621_199452_-	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA
198378:198423	attR	NA	NA	NA	NA
WP_010102906.1\|200001_200910_+	aldose 1-epimerase	NA	NA	NA	NA
WP_010102904.1\|201115_201817_+	peptidoglycan DD-metalloendopeptidase family protein	A0A292GJG6	Xanthomonas_phage	1.9e-11	43.8

DBSCAN-SWA_3

711842 : 720255

Stx2-converting_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_124072298.1\|711842_713636_+	alpha-galactosidase	A0A2P0VP48	Tetraselmis_virus	4.6e-46	30.3
WP_010112903.1\|714230_714584_+	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	9.7e-17	39.8
WP_038802501.1\|716017_717565_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	2.2e-137	51.2
WP_025990543.1\|717707_719189_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	5.7e-34	32.5
WP_038802500.1\|719518_719851_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	4.7e-37	71.6
WP_038802864.1\|719847_720255_-	IS66 family insertion sequence hypothetical protein	B6DZU5	Stx2-converting_phage	2.0e-13	44.1

DBSCAN-SWA_4

798950 : 809808

Agrobacterium_phage(16.67%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010114282.1\|798950_801251_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	6.7e-167	41.3
WP_009892611.1\|801247_801562_-\|protease	ATP-dependent Clp protease adapter ClpS	A0A218MMY6	uncultured_virus	2.6e-13	44.6
WP_004196460.1\|802091_802295_+	cold-shock protein	A0A2H4N7Y6	Lake_Baikal_phage	6.8e-23	81.8
WP_045568050.1\|802418_804005_-	multicopper oxidase family protein	NA	NA	NA	NA
WP_010102073.1\|804172_805432_-	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	1.5e-11	63.0
WP_010102068.1\|805691_806270_+	pseudouridine synthase	NA	NA	NA	NA
WP_081463944.1\|806533_806749_+	hypothetical protein	NA	NA	NA	NA
WP_025989693.1\|806936_807446_+	DUF192 domain-containing protein	A0A1B1IUW8	uncultured_Mediterranean_phage	6.5e-14	42.2
WP_010102066.1\|807693_809808_+	elongation factor G	E4ZFJ7	Streptococcus_phage	4.4e-56	26.8

DBSCAN-SWA_5

1857330 : 1864686

Burkholderia_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010117455.1\|1857330_1857873_+	PAAR domain-containing protein	A4JWV5	Burkholderia_virus	7.6e-53	59.1
WP_010117454.1\|1858130_1858583_+	VRR-NUC domain-containing protein	Q8W6S1	Burkholderia_virus	3.7e-29	53.1
WP_010117452.1\|1858582_1859659_+	DUF3396 domain-containing protein	A9YX32	Burkholderia_phage	4.3e-148	91.7
WP_010117446.1\|1860723_1861872_+	DNA cytosine methyltransferase	I6NLI4	Burkholderia_phage	3.4e-135	61.4
WP_010117442.1\|1861871_1862804_+	DUF4928 family protein	NA	NA	NA	NA
WP_010117439.1\|1862800_1863259_+	DNA mismatch endonuclease Vsr	I6NSG0	Burkholderia_phage	8.4e-37	54.8
WP_107950858.1\|1863486_1864686_+\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	4.6e-42	42.2

DBSCAN-SWA_6

2043371 : 2106873

Burkholderia_phage(25.0%)

integrase,plate,protease,transposase

attL 2065730:2065747|attR 2088958:2088975

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010106907.1\|2043371_2044085_+\|transposase	transposase	NA	NA	NA	NA
WP_010106906.1\|2044378_2049082_+	glutamate synthase subunit alpha	NA	NA	NA	NA
WP_010117283.1\|2049174_2050641_+	glutamate synthase subunit beta	NA	NA	NA	NA
WP_045568119.1\|2050918_2052433_+	alanine:cation symporter family protein	NA	NA	NA	NA
WP_025990026.1\|2052429_2052990_+	RNA 2',3'-cyclic phosphodiesterase	NA	NA	NA	NA
WP_010117269.1\|2053644_2054946_-	D-amino acid dehydrogenase	NA	NA	NA	NA
WP_010117268.1\|2054970_2056215_-	MFS transporter	NA	NA	NA	NA
WP_025990025.1\|2056732_2058499_-	ABC transporter ATP-binding protein/permease	NA	NA	NA	NA
WP_010117260.1\|2059123_2060257_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_010106892.1\|2060298_2060496_+	sulfur carrier protein ThiS	NA	NA	NA	NA
WP_010117258.1\|2060547_2061363_+	thiazole synthase	NA	NA	NA	NA
WP_010117255.1\|2061359_2062463_+	thiamine phosphate synthase	NA	NA	NA	NA
WP_010106887.1\|2062562_2063381_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	6.8e-21	29.4
WP_010106886.1\|2063377_2064145_+	lipid asymmetry maintenance ABC transporter permease subunit MlaE	NA	NA	NA	NA
WP_010117253.1\|2064157_2064691_+	outer membrane lipid asymmetry maintenance protein MlaD	NA	NA	NA	NA
WP_010117250.1\|2064738_2065692_+	VacJ family lipoprotein	NA	NA	NA	NA
2065730:2065747	attL	NA	NA	NA	NA
WP_010106880.1\|2065806_2066439_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_010106879.1\|2066435_2066705_+	STAS domain-containing protein	NA	NA	NA	NA
WP_010106878.1\|2066934_2067861_+	ABC transporter ATP-binding protein	A0A1M7XV31	Cedratvirus	2.6e-21	32.9
WP_010117247.1\|2067857_2068613_+	ABC transporter permease	NA	NA	NA	NA
WP_006029348.1\|2068707_2068947_+	BolA family transcriptional regulator	NA	NA	NA	NA
WP_010117245.1\|2068960_2070310_+	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA
WP_010106872.1\|2070306_2070963_+	ATP phosphoribosyltransferase	NA	NA	NA	NA
WP_010106871.1\|2071003_2072341_+	histidinol dehydrogenase	NA	NA	NA	NA
WP_010106870.1\|2072492_2073563_+	histidinol-phosphate transaminase	A0A0H3TLT9	Faustovirus	1.2e-14	25.9
WP_010106868.1\|2073626_2074214_+	imidazoleglycerol-phosphate dehydratase HisB	NA	NA	NA	NA
WP_010106867.1\|2074269_2074890_+	YchE family NAAT transporter	NA	NA	NA	NA
WP_010106865.1\|2074886_2075528_+	imidazole glycerol phosphate synthase subunit HisH	NA	NA	NA	NA
WP_010106863.1\|2075694_2076450_+	1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase	NA	NA	NA	NA
WP_010106861.1\|2076532_2077306_+	imidazole glycerol phosphate synthase subunit HisF	NA	NA	NA	NA
WP_010106859.1\|2077305_2077719_+	phosphoribosyl-AMP cyclohydrolase	NA	NA	NA	NA
WP_010106857.1\|2077715_2078084_+	phosphoribosyl-ATP diphosphatase	NA	NA	NA	NA
WP_010106856.1\|2078137_2078527_+	membrane protein	NA	NA	NA	NA
WP_010106855.1\|2078555_2078921_+	histidine triad nucleotide-binding protein	NA	NA	NA	NA
WP_010106854.1\|2079008_2079245_+	Sec-independent protein translocase subunit TatA	NA	NA	NA	NA
WP_010117244.1\|2079267_2079795_+	Sec-independent protein translocase subunit TatB	NA	NA	NA	NA
WP_010106852.1\|2079833_2080616_+	twin-arginine translocase subunit TatC	A0A1B1IVR7	uncultured_Mediterranean_phage	1.9e-25	29.7
WP_010106851.1\|2080923_2082132_-	Do family serine endopeptidase	A0A1B1IRD3	uncultured_Mediterranean_phage	6.5e-12	31.9
WP_010106850.1\|2082153_2082900_+	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA
WP_025990024.1\|2083120_2083741_+	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA
WP_010106848.1\|2083741_2085124_+	cytochrome bc complex cytochrome b subunit	NA	NA	NA	NA
WP_010117241.1\|2085145_2085904_+	cytochrome c1	NA	NA	NA	NA
WP_010106845.1\|2085997_2086609_+	stringent starvation protein A	NA	NA	NA	NA
WP_025990023.1\|2086678_2087203_+\|protease	ClpXP protease specificity-enhancing factor	A0A1S5R3H3	Pseudomonas_phage	8.7e-22	51.5
WP_010117237.1\|2087375_2088404_-\|integrase	tyrosine-type recombinase/integrase	E5E3T0	Burkholderia_phage	2.4e-172	88.3
WP_038802022.1\|2088403_2088682_-	DUF4224 domain-containing protein	E5E3T1	Burkholderia_phage	1.2e-33	84.1
WP_081469853.1\|2088786_2089353_-\|plate	Baseplate J family protein	A0A089FGR9	Burkholderia_phage	3.8e-47	79.3
2088958:2088975	attR	NA	NA	NA	NA
WP_085970859.1\|2089544_2090778_+\|transposase	IS3 family transposase	A0A1B0Z042	Pseudomonas_phage	6.9e-102	62.8
WP_010117664.1\|2092432_2092870_+	SET domain-containing protein-lysine N-methyltransferase	NA	NA	NA	NA
WP_010117665.1\|2092886_2093903_-	AraC family transcriptional regulator	NA	NA	NA	NA
WP_010117666.1\|2093919_2094372_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_025990088.1\|2094901_2095747_+	ABC transporter permease	NA	NA	NA	NA
WP_010117668.1\|2095733_2096588_+	ABC transporter permease	NA	NA	NA	NA
WP_010117669.1\|2096584_2097616_+	extracellular solute-binding protein	NA	NA	NA	NA
WP_010117671.1\|2098277_2098586_+	H-NS histone family protein	NA	NA	NA	NA
WP_045568121.1\|2099000_2101790_+	type VI secretion system tip protein VgrG	A0A2H4JCD4	uncultured_Caudovirales_phage	8.1e-90	34.2
WP_045568122.1\|2101803_2104044_+	DUF3274 domain-containing protein	A0A077K801	Ralstonia_phage	8.1e-24	27.7
WP_052712363.1\|2104062_2105709_+	DUF2875 family protein	NA	NA	NA	NA
WP_010117228.1\|2105718_2105982_+	hypothetical protein	NA	NA	NA	NA
WP_107950761.1\|2106115_2106873_-\|transposase	IS5 family transposase	NA	NA	NA	NA

DBSCAN-SWA_7

2457476 : 2466866

Hokovirus(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010116963.1\|2457476_2459426_+	molecular chaperone DnaK	A0A1V0SH73	Hokovirus	5.0e-147	50.3
WP_010116959.1\|2459687_2460821_+	molecular chaperone DnaJ	A0A1V0SBY2	Catovirus	1.7e-22	26.6
WP_010116957.1\|2460852_2462853_+	bifunctional anthranilate synthase component I family protein/class IV aminotransferase	S4VT78	Pandoravirus	2.7e-55	32.2
WP_010116954.1\|2463177_2463993_-	3-methyl-2-oxobutanoate hydroxymethyltransferase	A0A0N7HVJ8	Ostreococcus_lucimarinus_virus	3.7e-35	31.7
WP_010116953.1\|2464057_2464741_-	deoxynucleoside kinase	A0A249XZR7	Enterococcus_phage	4.4e-05	26.0
WP_010116951.1\|2464737_2465265_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA
WP_010106192.1\|2465300_2466866_-	polynucleotide adenylyltransferase PcnB	H7BUW3	unidentified_phage	3.3e-24	31.6

DBSCAN-SWA_8

3934946 : 3950993

Leptospira_phage(25.0%)

integrase,transposase

attL 3926186:3926203|attR 3956375:3956392

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3926186:3926203	attL	NA	NA	NA	NA
WP_025989824.1\|3934946_3936551_-\|transposase	IS66 family transposase	NA	NA	NA	NA
WP_010107948.1\|3936650_3937004_-	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	1.3e-16	43.0
WP_010115644.1\|3937003_3937498_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_010112228.1\|3937847_3938048_-	hypothetical protein	NA	NA	NA	NA
WP_010112230.1\|3938044_3938503_-	hypothetical protein	NA	NA	NA	NA
WP_085970860.1\|3939473_3940684_-\|transposase	IS3 family transposase	A0A1B0Z042	Pseudomonas_phage	4.0e-102	64.8
WP_010121075.1\|3942139_3942532_-	DUF3331 domain-containing protein	NA	NA	NA	NA
WP_010121077.1\|3942573_3943866_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_025990429.1\|3944004_3944676_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_107950808.1\|3944874_3945685_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_107950810.1\|3945982_3946800_-\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	2.5e-07	35.0
WP_124072273.1\|3947780_3948503_+	hypothetical protein	NA	NA	NA	NA
WP_045568335.1\|3948766_3949381_-\|integrase	tyrosine-type recombinase/integrase	A0A090C6M9	Clostridium_phage	7.1e-07	29.0
WP_010122425.1\|3949961_3950993_+\|transposase	IS110 family transposase	NA	NA	NA	NA
3956375:3956392	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP009556

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP009556_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009556_1

2327361-2327517

Orphan

Consensus_repeat	Method
TCGGCCGTATCCACGTCGGCGGCTTCCAAGCCGGCCG	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP009556_1

>merge|NZ_CP009556|1|2327361-2327517|CRISPRCasFinder
GCATCCGTATCCACGTCGGCCGTATCCACGTCGGCCGTATCCACGTCGGCGGCTTCCAAGCCGGCCGTTTCCAGGTCGGCTGTTTCCACGATGGCTGATTCCAAGCTGACCATATCCACATCGGCCGTTTCCACGTCGGCGGCTTCCAAGCCGGCCG

>NZ_CP009556|1|1|2327361-2327517|CRISPRCasFinder
GCATCCGTATCCACGTCGGCCGTATCCACGTCGGCCG	TATCCACGTCGGCGGCTTCCAAG
CCGGCCGTTTCCAGGTCGGCTGTTTCCACGATGGCTG	ATTCCAAGCTGACCATATCCACA
TCGGCCGTTTCCACGTCGGCGGCTTCCAAGCCGGCCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009556.1\|WP_025990193.1\|2316278_2318228_-\|collagenase	unknown	unknown	gnl\|CDD\|366791
NZ_CP009556.1\|WP_010121430.1\|2330851_2333329_-\|DUF2169-domain-containing-protein	unknown	unknown	gnl\|CDD\|370755
NZ_CP009556.1\|WP_010118343.1\|2315675_2316002_+\|DUF4148-domain-containing-protein	unknown	unknown	gnl\|CDD\|379321
NZ_CP009556.1\|WP_010112398.1\|2335769_2336888_-\|type-VI-secretion-protein-ImpA	unknown	unknown	gnl\|CDD\|274544
NZ_CP009556.1\|WP_025990468.1\|2333361_2335698_-\|type-VI-secretion-system-tip-protein-VgrG	unknown	unknown	gnl\|CDD\|274542
NZ_CP009556.1\|WP_099976098.1\|2339894_2340449_-\|type-VI-secretion-system-baseplate-subunit-TssE	unknown	unknown	gnl\|CDD\|226049
NZ_CP009556.1\|WP_124072333.1\|2313559_2313946_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009556.1\|WP_010108636.1\|2310820_2311111_-\|DUF1488-domain-containing-protein	unknown	unknown	gnl\|CDD\|377825
NZ_CP009556.1\|WP_025990467.1\|2329772_2330855_-\|pentapeptide-repeat-containing-protein	unknown	unknown	gnl\|CDD\|224276
NZ_CP009556.1\|WP_010121438.1\|2340462_2341389_-\|ImpE/SciE-family-protein	unknown	unknown	gnl\|CDD\|226862
NZ_CP009556.1\|WP_010108634.1\|2311989_2312178_-\|DUF2964-domain-containing-protein	unknown	unknown	gnl\|CDD\|314178
NZ_CP009556.1\|WP_010112396.1\|2336897_2337977_-\|type-VI-secretion-system-baseplate-subunit-TssG	unknown	unknown	gnl\|CDD\|274530
NZ_CP009556.1\|WP_010108633.1\|2312529_2313279_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380339
NZ_CP009556.1\|WP_010121426.1\|2328944_2329604_-\|DUF3540-domain-containing-protein	unknown	unknown	gnl\|CDD\|371873
NZ_CP009556.1\|WP_010112406.1\|2328545_2328932_-\|DUF4150-domain-containing-protein	unknown	unknown	gnl\|CDD\|372665
NZ_CP009556.1\|WP_045568485.1\|2319772_2325862_+\|alpha-2-macroglobulin	unknown	unknown	gnl\|CDD\|225248
NZ_CP009556.1\|WP_081469917.1\|2318663_2319218_-\|acetyltransferase	unknown	unknown	unknown
NZ_CP009556.1\|WP_010108635.1\|2311333_2311786_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009556.1\|WP_010121436.1\|2337976_2339866_-\|type-VI-secretion-system-baseplate-subunit-TssF	unknown	unknown	gnl\|CDD\|377574
NZ_CP009556.1\|WP_010118345.1\|2314019_2315186_+\|NAD(P)-binding-protein	unknown	unknown	gnl\|CDD\|136171

Protein	Function_ID	Function_description	E-value
NZ_CP009556.1\|WP_025990193.1\|2316278_2318228_-\|collagenase	gnl\|CDD\|366791	pfam01752, Peptidase_M9, Collagenase. This family of enzymes break down collagens.	2.36963e-151
NZ_CP009556.1\|WP_010121430.1\|2330851_2333329_-\|DUF2169-domain-containing-protein	gnl\|CDD\|370755	pfam09937, DUF2169, Uncharacterized protein conserved in bacteria (DUF2169). This domain, found in various hypothetical prokaryotic proteins, has no known function.	1.59595e-85
NZ_CP009556.1\|WP_010118343.1\|2315675_2316002_+\|DUF4148-domain-containing-protein	gnl\|CDD\|379321	pfam13663, DUF4148, Domain of unknown function (DUF4148).	6.01812e-13
NZ_CP009556.1\|WP_010112398.1\|2335769_2336888_-\|type-VI-secretion-protein-ImpA	gnl\|CDD\|274544	TIGR03363, VI_chp_8, type VI secretion-associated protein, ImpA family. This protein family is one of two related families in type VI secretion systems that contain an ImpA-related N-terminal domain (pfam06812).	2.2021e-34
NZ_CP009556.1\|WP_025990468.1\|2333361_2335698_-\|type-VI-secretion-system-tip-protein-VgrG	gnl\|CDD\|274542	TIGR03361, VI_Rhs_Vgr, type VI secretion system Vgr family protein. Members of this protein family belong to the Rhs element Vgr protein family (see TIGR01646), but furthermore all are found in genomes with type VI secretion loci. However, members of this protein family, although recognizably correlated to type VI secretion according the partial phylogenetic profiling algorithm, are often found far the type VI secretion locus.	0
NZ_CP009556.1\|WP_010112396.1\|2336897_2337977_-\|type-VI-secretion-system-baseplate-subunit-TssG	gnl\|CDD\|274530	TIGR03347, VI_chp_1, type VI secretion protein, VC_A0111 family. Work by Mougous, et al. (2006), describes IAHP-related loci as a type VI secretion system (). This protein family is associated with type VI secretion loci, although not treated explicitly by Mougous, et al. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	4.92097e-119
NZ_CP009556.1\|WP_010108633.1\|2312529_2313279_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|380339	cd02209, cupin_XRE_C, XRE (Xenobiotic Response Element) family transcriptional regulators, C-terminal cupin domain. This family contains transcriptional regulators containing an N-terminal XRE (Xenobiotic Response Element) family helix-turn-helix (HTH) DNA-binding domain and a C-terminal cupin domain. Included in this family is Escherichia coli transcription factor SutR (YdcN) that plays a regulatory role in sulfur utilization; it regulates a set of genes involved in the generation of sulfate and its reduction, the synthesis of cysteine, the synthesis of enzymes containing Fe-S as cofactors, and the modification of tRNA with use of sulfur-containing substrates. This family belongs to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold capable of homodimerization.	3.41884e-27
NZ_CP009556.1\|WP_010108636.1\|2310820_2311111_-\|DUF1488-domain-containing-protein	gnl\|CDD\|377825	pfam07369, DUF1488, Protein of unknown function (DUF1488). This family consists of several hypothetical bacterial proteins of around 85 residues in length. The function of this family is unknown.	3.56289e-29
NZ_CP009556.1\|WP_025990467.1\|2329772_2330855_-\|pentapeptide-repeat-containing-protein	gnl\|CDD\|224276	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown].	2.6362e-21
NZ_CP009556.1\|WP_010121438.1\|2340462_2341389_-\|ImpE/SciE-family-protein	gnl\|CDD\|226862	COG4455, ImpE, Protein of avirulence locus involved in temperature-dependent protein secretion [General function prediction only].	9.76308e-72
NZ_CP009556.1\|WP_010108634.1\|2311989_2312178_-\|DUF2964-domain-containing-protein	gnl\|CDD\|314178	pfam11177, DUF2964, Protein of unknown function (DUF2964). This family of proteins with unknown function appears to be restricted to Proteobacteria.	2.28652e-21
NZ_CP009556.1\|WP_045568485.1\|2319772_2325862_+\|alpha-2-macroglobulin	gnl\|CDD\|225248	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only].	1.9984e-83
NZ_CP009556.1\|WP_099976098.1\|2339894_2340449_-\|type-VI-secretion-system-baseplate-subunit-TssE	gnl\|CDD\|226049	COG3518, COG3518, Predicted component of the type VI protein secretion system [Intracellular trafficking, secretion, and vesicular transport].	6.58132e-24
NZ_CP009556.1\|WP_010112406.1\|2328545_2328932_-\|DUF4150-domain-containing-protein	gnl\|CDD\|372665	pfam13665, DUF4150, Domain of unknown function (DUF4150).	2.61635e-26
NZ_CP009556.1\|WP_010121426.1\|2328944_2329604_-\|DUF3540-domain-containing-protein	gnl\|CDD\|371873	pfam12059, DUF3540, Protein of unknown function (DUF3540). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are typically between 212 to 238 amino acids in length. This protein has a conserved SCL sequence motif.	3.83243e-65
NZ_CP009556.1\|WP_010121436.1\|2337976_2339866_-\|type-VI-secretion-system-baseplate-subunit-TssF	gnl\|CDD\|377574	pfam05947, T6SS_TssF, Type VI secretion system, TssF. This is a family of Gram-negative bacterial proteins that form part of the type VI pathogenicity secretion system (T6SS), including TssF. TssF is homologs to phage tail proteins and is required for proper assembly of the Hcp tube (the T6SS inner tube) in bacteria.	0
NZ_CP009556.1\|WP_010118345.1\|2314019_2315186_+\|NAD(P)-binding-protein	gnl\|CDD\|136171	PRK07045, PRK07045, putative monooxygenase; Reviewed.	0

>NZ_CP009556.1|WP_045568485.1|2319772_2325862_+|alpha-2-macroglobulin
MKHDDKHNTPNRTTARLLWRIGAVAALGAAAALSLRADAARTTSVSPQGTVAEVRQTVVKFDEAMVAFGSASAPDPARVSCTDSAAGRGQGHWLDGKTWAYDFENDLPPGVRCTVSLNDALRSVAGHAATGPRRFTFETGGPFPVSVRPGSREIEERQVFVVKLNGPADVRSALANIWCEAAGIGNRIPVEPAEASTRAALLDHFRWKKDAARVLTLSCAQALPASAKMQLVYGKGVASPSGIANDTERRFDYTVRAPFAASFSCERENAKAPCTPLRPLTLSFNAPIARRSAEKIRLRGPDGAIEPFFKPDDRSEEVTNVQFAAPLPAQAALTLELPSGLRDVTGRTLSNADLFPLATRTAPMPPLAKFSSGAFGIVERFAEPGAPALVPVTLRNVEADLHVEGLNAGGASFSNLKVENDAAIRAWMRLVERFDGRAMTVESIDKLRPGLLARGQHPVYVPLAAGERQPKPQHRQIDIRSLSLLAGEPGVQTLTLPKADPKALRPFEVVGVPIDKPGFYVLELASPALGRSLLAKPSKMYVRTAVLVTNLGVHLKQGRENSVVWVTTLDKGKPVPNAQVRVSDCNGDEIAAGRTDAQGLLAIDTPFEPKRECDYSKGDGDYFVSARVDDPKTGPDMAFVRSSWNRGIESWRFDVPTDMSRTPTVRAHTVFDRTLVRAGETISMKHFVREETLRGLAFPAHYPARATIRHLGSGQTYRVPLAWAADHSADTRFTLPAAAKLGEYGVELEDGDEDAPSASYYGGSFRVEAFRLPVFKGSIGARDAKTNPLVGAKEAPLAVQIDYVSGGGASNLPVQVSALLQSAAPPFAEQYADFSFAPYRPETDGGMADDDMQDDDSAPRGSDPDATKLIADKIPLTLDRTGSGSLTLKALPAVDAPKRAALEATFADPNGEVQTIRGDAMLWPAAVVAGIKAGHWVSVGQRVPVQALVVDLQGKPRASASVEIKGVARVTTSSRKRMVGGFYAYDNKSDTRDLGVLCSGKTDAHGRVSCDATLAQAGNVQLIAVAKDGDGRASNASTSVWVTREDELWFGGGNTDRIDVIPEKTAYEPGETARFQVRMPFRYATALVAVERGGVMETRVVELNGKNPTVDLKVGDTWGPNVYVSVLALRGRLREVPWYSFFTWGWKAPIEWARAFWREGRHYEAPTALVDLSKPAFRYGLGEIKVGTGAHRLGVAVTTDAARYPVRGNAHVRVKVTQPDGRPAPAGTQIALAAVDEALLELMPNRSWDLLDAMLQRRAYGVETATAQMEIVGRRHFGRKAVPAGGGGGMAPTRELFDTLLLWNPRVTLDANGSAGVDVPLNDALTRFRIVAIAATGADRFGTGSATIRSAQDLQLISGLPPLVREGDAFRAQVTVRNTTDRKMDVVVTPRVPGVDVAPRTVSLAPDAAQEIAWTVTVPEQAIDAAGALSWRIEAAEQGGKRAADALAVTQKVVPALPVTVQQATLAQVDGTLTLPVAPPADAAANAQGAPRGGIAVSLQSKLADGLPGVRRWFERYPYRCLEQQASRAIGLRDPAQWQALTARMPVYLDRDGLASYFPPSSDDAHNGSPSLSAYLLVLADEAGRLDARFALPEDVRTQLESGLARFVEGRIERDTWAPRQDRDLRKLAAIEALSRHGAAQGRMLGSIEIAPNQWPTSAVIDYHAILSRVKDIPQRDEKRAQVEQILRARLAYQGTQLVFSTARDDDLWWLMTSNETNAARLALEFAGDAGWKDEMPRVAAGLLALQRSGAWQTTTANALGLLAVERFSRAYERAPVAGTTKVTLGADARSIAWSQPVAAEARAAPASTGAVATAAASTAAGSTAAASATAATRAAAARSVMLPWPRAARAPGTLSVVQEGSGRPWATIESLAAVPLRAPFAAGYRIAKTVTPVSLAIKGALTRGDVLRVRLDIDAQSDMTWVVVNDPIPSGATILGSGLGRDSEAATQGGKSPDGAWPAFVERDFDGYRAYYDYLPKGKFTVEYTVRLNNAGTFGLPPTRVEALYAPSVYGLWPNPPVTVKPADAGKP
>NZ_CP009556.1|WP_081469917.1|2318663_2319218_-|acetyltransferase
MTESTVVRMAHSGDYLNILSLQKANQIANLTEAERKNGFLSAEIPEQKVDAIASDIGIVVAYEQTEFAGFFCISRLDPWRGNTIIDALVASFEKRGEYASEDLSDTVCLFGPMCLSQVARGKGILEKMIDFAIASAKTHFKNAISFIAVDNGRSANAVAKLGYRPVHRFVSGEREYHALVADLD
>NZ_CP009556.1|WP_025990193.1|2316278_2318228_-|collagenase
MLITEVSRKTRRWSAVVAVSIITGLVGTAWASTQPTQEKQARMPRLPQNLPLSPEQAEYNLPLSKQDRATLVEPSRQKQPAKRSKRSAPGADCRDMSVMTQYHGAALADYIANLPDYECHYGLFSVDKPLAAQIFNAENVHAVASRFVQDIYRYDASNLILVNLLIYLRSAYYQYEVSGLADPIPDLAVWLRPYILQSLKGDGLHRDALYRENARAPSTANELMKLITNMKDEAYYLPTLKDRIALYTASAANPQAAAPLLQPSAAGGFTGLLTVFFYAHQRSAAQQMLGSDATLPETLDRFVTANRASLSNTSAAYQLADAARETYRFLRYPAQKPRVKKMIQDMLASTSMTGAGSDLWLAAAEAVDYGDSGNCADYGTCDYKKRLTDAVLTHRHACSASVRILAQDMTAPQLQSVCAAVARQDDYFHRMMKTGRKPVAGDRNDTIELVVFDDYENYRKYASVIYGISTDNGGMYLEGDPSAPGNQARFIAHEASWLRPEFKVWNLEHEFTHYLDGRYDMAGDFAASTAKPTVWWIEGVAEYLSRKNDNQESIDAARTGTYRFSDVLGTRYSSSDYVARAYRWGYMATRFMFERHRADVDTIVSRFRTGDYDGYENYVAYIGRRYDNEFVDWARDATTAGEPPLPAKN
>NZ_CP009556.1|WP_010118343.1|2315675_2316002_+|DUF4148-domain-containing-protein
MKSALKTIALALALAVPALSFAQPSSNGPLTRAQVRDELIQLQKAGYQPSKNQYPANIQATEARIASASGSAGYGGTAGYGGTAGGAMQSGQRVSPTSGGWDASYRHH
>NZ_CP009556.1|WP_010118345.1|2314019_2315186_+|NAD(P)-binding-protein
MKSKHVDVLINGSGIAGVALAYLLGRRGYDVTVVEQLARNRAQNGADLLKPSGIDIIRRMDLLDDVFAAGGLERDAMKLFHDGELIASLDYRVSSTLGFFILIPCEQLRRLLIGKLDGLPNVDLRFETSIEQVEQDAGGAVTSLVLSDGGTVAPKVLIGADGARSMIRADILQMHAERVPYATPMAFGTIPLTDSVRECNRLYVDSNKGLAYFYPIGNEATRLVVSFPADEMQGYLADATRAKLVARLSEFVSRESADAMATIGAGTEFPLIPLGRMNLSSYHKQNVVLLGDAAHSIHPITGQGMNLAIEDAGELGHCLDRHLNGQVALAEALDAFERARHPVNEAVISYGHSLATTYHDRSALLANFRSQLQTSGRDSALLGTASEA
>NZ_CP009556.1|WP_124072333.1|2313559_2313946_-|hypothetical-protein
MTQAYEQDLCAASVSSISYSRAIEYENFGAPQTRRPFAVDSSGNLRWLGRNSFPPSRPARICSEVNLSCGPLADRDRDRNRIKDAKNTQIFMAERNGNRRAGCADEGRLVYFIFLKKSKSLFRPMPDK
>NZ_CP009556.1|WP_010108633.1|2312529_2313279_+|helix-turn-helix-transcriptional-regulator
MDSDIMHIGGRIRRLRRELKKTLLEVATEANLSVGFLSQVERNLTGISISSLVNVARALRAPLSALIDQPRQDQPDSHQGSRESYSIRPTQQRYERLSTTFTGSQLNAVKVSMMEGYCSEWVAHAGDEFVFVLSGRVRYTVGKQDFPLGPGDSLHFDAHERHRVVNVGNEPVELIAVGTLPLFGDGQPAFPSLPGEQKPLRARTARKTAEPPPVKAPSAQKAERPKRAPAAHAIATSGVPRRVAKKTAR
>NZ_CP009556.1|WP_010108634.1|2311989_2312178_-|DUF2964-domain-containing-protein
MVRKYRVILATIAVFISLAGMMEAVRGLLFDSNAEFLYGVVALSLGVAAFVVLLNPTPKDEL
>NZ_CP009556.1|WP_010108635.1|2311333_2311786_+|hypothetical-protein
MTLKANLEGVRDTYRLCFVRNPWAYFTCLPLDRQCGDRWSEAPYELYAGPPYGDSPDQLLRVAFDGPLLPPEAGRSAVTCSVVDINEGLAPWLRTESYFGGEPLSIAAGATLGAFVETIEKAGGTVFIPLGWGELPLADTRAHSAVASGG
>NZ_CP009556.1|WP_010108636.1|2310820_2311111_-|DUF1488-domain-containing-protein
MPVMKISFPQDPPPEYCARDLVVAFPALVDGEYVQCAITAEALEDHFGAASLKEDDLLTAFDLHRGKIEHAARRMLTEIGGKPVLLHSGFFRFLYE
>NZ_CP009556.1|WP_010112406.1|2328545_2328932_-|DUF4150-domain-containing-protein
MSWVNSSAGGDNTATSVNRTPPVGVPVGYPNRAQRASAIPNVTNVYVGGGPVHNAATIIPISSGDSAGAMGGAASGTVSAVSRNPQGATKTLVSGMPITRMTDPTQQNSNNTIGSGSSPSQTIVLNLS
>NZ_CP009556.1|WP_010121426.1|2328944_2329604_-|DUF3540-domain-containing-protein
MNSTVAALHTRFSPTTRENAATILAVLPDGVFLVASEGATMHCRRAFSCLVEPRTGDRVAISRADRRCGYVTSILERPDADGVHIRVHGDLVLESTQSVHLKGGDALCLTSREQVSIKTEQLAMSAREASLCSDSTTLTSAEFHGRLGKVRLIGKILEMVMDHVAQSCRSSFRTVETVEHLRASHIDHAATGNMRLHAKNTLLTAEKLSKIDAGQIHLG
>NZ_CP009556.1|WP_025990467.1|2329772_2330855_-|pentapeptide-repeat-containing-protein
MRTNAEQLREAIRHGRVVKDRVIDSENLDGQDFSGGVFEHVQFIDASMKRVQLGDAVFNGCLFRGVDMQHADLSKCTFDKCSLDDVRLSGSRLHGCTMSSTRAAGADFCGAHANGFNCVTSDLSDCRFHDGRIESSLFCETRLERADFTRAVVRKTVFYQLDLKQTILVDATFNDAVFAESSLVGQRLRGQRMHRCQFARADLRNVDFTAANLAYCNFQGAKLSGARLEEADARYAIFVESEMQDAVCRNAALQDSIWVQADIRNVDFTGSRLDRAVLQHARCNGTRFSRASLAGADFSCADLTGAEFDGAGFARTGFHGAIAPDIAWHEHPGAMDRDPELADAQAWSRQRDERGDRDRH
>NZ_CP009556.1|WP_010121430.1|2330851_2333329_-|DUF2169-domain-containing-protein
MKIIKPFRISPLTRLYRMHGEEHLGVAALMVATLGDDPRLLTDSELWNLAGDELGGYTLDMALPKACPEFLVSGHAYGKYADAPGGGTCEVGIGVAGIEKRLRVSGDRQWDGMRATAPRPFERLALDWAFAYGGAGCEDNPRGRGAERRQGAVRYLPNIEYAHSPMRFPDQRPVPAGFCPIDAAWPQRAGLYGEHDQQWLEEDCPGFPRTLDPRYFNIAPADQQLIALSEFPDGAAYELMHLHPEHALLTGRLPALRARTFVVRTGSETPEEIPMRLTTAWFVPHRERVVMIYHGVTTIRAFDASDVQTLLFGADASAQARPAEWYRQVIEWRTRHEKAALYALRDQDLLPDRYLSPDFPAMSGAVPQDARQRLLRDKLSAFPDAGQIETPRPDQLVEFVERQEAAAEEQRTRLEEMRRDLSSNEAFANAARRGPPASVAIAGDDAAQGAAAPADRSDIRHMQRDADESLRKLYLQSAQHQDAPERLDEAASRPHRERVAAAIAAGLSLEGADLTGVDLAGMDLRGARLSGAMLENADLSGADLSDAALSHAVLARANLRQTGFRNADLTGANLSLANCDQTDFSGANLSDCILERVHLRNCRLNGGIVANTRFSDCRFHAVDFRQATLCNLIFIDQSFEDADFSETTIRKMLLMNCTLANVRFSAASIEGFGIIDARAPGQLRFDRASVIKACFVQQCDIGRADFSSATLKEVNFRETNLRAADFGEARIGSCDFTDACLQGSNFRGAKAEGSYFVRADFAGADLRDTDLIAAYLRGATLDGADLRRANLFRANLSQILADVDTRWEEAYLHKAMRFPRAEARA
>NZ_CP009556.1|WP_025990468.1|2333361_2335698_-|type-VI-secretion-system-tip-protein-VgrG
MPNFPAARTVTVSGPALPVSPVGDPALQLSAVHGNETLSEIYAYTLDCLTPPDLTLPDEQAANLDLKAMIGKALTVTVQLEGMGAFVPGMPGLSGAANIGQGKREISGIVTGASFEGQLNRQCRYRLTMQPWIYLVDQRSDYRIFQNRTVEEIVDEVLNAYSYSYDKRLSGRYPKLAYQVQYGETDFAFIQRLMQEHGIYWFFEHSNKVHRMVLVDHLGAHKPVESAAYRTLRYYPPGHKIDMEYIDAFNTAERIQPGRWTTSDFDFEHPKARLGVENALPQDTAHNGLERYEWPGDYTDPALGEHFARVRMEEVRAQGERASGGGNVRDVVCGTTFTLEGYPHASANREYLVLGASFTATETEGAAGPGEYRIGTSFVVQPATTVFRPPRTVRRPRTRGPQTAVVTGPPGQEIWTDQYGRVKLKFHWDRSPVRDQNSSCWVRVSYAWAGNSYGGINIPRVGSEVIVDFENGDPDRPIVTGQVYNALHMPPWALPDNATQSGMLSRTPAGSGENANMLRFEDKAGEEQIKLHAERNYDVSVERDSTITVGRKHLTLVGLDLPPVPSTRSPLDRLIELLRLGGAPRPASPGQRPMHRQQQQQPQQQQQQQRQQQQQQQQYQQQYQQLKPQRQMQRVGGLQALAANVAKALQDIVAVLTDSSATASVSTVQGASASVVFGDTKGVNVGHTVTITSGNARTEVNGTNFSQHAASVSLTGMSTGLTGFSTSETGSSVDTKGCSISTTGASISTTGMKYEKTVKDFSEKKQCVCFVDGIHITL
>NZ_CP009556.1|WP_010112398.1|2335769_2336888_-|type-VI-secretion-protein-ImpA
MSDNKKHAGKSASARTPKAHDWMAPVDPAAPCGADLEYDPEFVVLSAKVAPRAEAQYGDFVGSPEPVNWSDVDRDCRRLMMRSKDMRLAVLFTRCRTRLAGAAGLAEGAGLLAVWLATFPDAIHPQPDVDADRDAALEIRKNALQALTDADGLLADVREIALTRSTAIRLQVRDVERAFAQPRPGDALAPESVVRQLDELQAQQPAVLAGFDEALASVGAIDAWSREHLGAYAPDLSALAALLRPVAGRSVRSGGADSAAAPADVSADASADAPSMRKGGRTQADESPPAHGEGVAALIAGSVGRGAIATPADRHAARELIRQAREWFEQHEPSSPIPVLLRRAEYFVGKRYAEVVHAIPGELLAQWGGDES
>NZ_CP009556.1|WP_010112396.1|2336897_2337977_-|type-VI-secretion-system-baseplate-subunit-TssG
MAHVMLETVVRDTALSSQLLARLRAEPWRYSFLTLLRRIGADPRIDPVGTARRPQAEPFRLGQQPSLAFAPREIASVGEASGRVKVRLFGLGMLGPNGPLPIHVTEIARDREESRRDATLGNFLDIFHHRYLTLLYRAWASAQAAAGLDRPGDERFSFYIASLTGQDTDEIGRRPLPAHARLSASPHLVREARNPDGLRMTLARYFGVPVTIEENVFHWIQVDPLEHSYLGKPGASSTMAEGAMLGELVPDRQHKFRIVVGPLDIDEYLRFTPQGEDLPRLVEWVRAFVGYEFEWELELRIKPNGAPPAVMGGTQQLGWSGWLGRSPSGEPVTGMRFEPERYADRFDRDADRSAQPLRA
>NZ_CP009556.1|WP_010121436.1|2337976_2339866_-|type-VI-secretion-system-baseplate-subunit-TssF
MDPRLLDYYNQELIYMRELAAEFAQAHPKIARRLGMQAGEVADPYVERLIESFCFMAARMQIKLDAEFPRFTGRLLEVLYPNYVAPTPSMAVARFYPSRTEGNLADGFRIARGTAFTARVPAGEKTACQFRSGQDVTLYPLEIAEARLTGIPPDIPALDRYVPAGTQVRGALRLRLRTTGNARVADLKGLDRLPLYLAGDDQVASHLFELLHAAGVATITGAPGEFATPGQPLSAVTVDAVVHEGLGADQSLLPLTWSKFHGHNLLHEYFACPGRFYFFALTGLEAGLRRVTGQEVEIVVLLDQSPERLANVVDASRFALFCTPVINLFARHMDRIELSSGQTEFRLVPARLAPLDYEVFSVEAMYGQVAATSAELEFRPLYQTLNNDEHNHGRYFSTRRERRLVSESARRYGTRTPYVGTEMFVSLVDQNEAPYSEEIRYLSVDALVTNRDLPSLVPRDGVRDLTVAESAPLESVGLIRAPSVPKAPYAEREMAWRLIRQLNFNYLPLDELDHRAGGQGLRDLLRLFLTGDEADNRRQIESLVGVKTRPVTRKLPGAGPLVFGRGVECSLTVDEPGFSGVSPYLFGVVLEHYLARHVSINVFTQTELHSIQRGRIARWPVRMGARGGA
>NZ_CP009556.1|WP_099976098.1|2339894_2340449_-|type-VI-secretion-system-baseplate-subunit-TssE
MPDRGNDRRTGDDGAATPRRANTHLLPTLLDRLRDDAPQRQTEAPGEYAVTRMQMRGIVQRDLAFLLNTMSIDEHIDRERYPEAAASTVNFGMPPLAGAFMASRKWAEIERIIRRVIRDFEPRLIAETLVVAPSKDVEAAERSNVLSFEVRGMIRMDPYPLEFMVQSSLDLETSQVNITGMRAS
>NZ_CP009556.1|WP_010121438.1|2340462_2341389_-|ImpE/SciE-family-protein
MTMPIPSDSLSAAEAGSSRDLPLEARLASMETTVRAQPAVAEHRWSLFQLLCVTGQWARAVQQLQVHAQLAPQQAQAAQAYRDLVRAERWRARVVAGQARPGFVFEAPQWIDDLLEALRVASIGRHDEADRVRERALDQAPLVAGRMPPALFDWIADSDSRFGPVCEIVTAGHYRWLPFSEISAWHVARPAKLLDLVWAPCALKLVDGSLVRGFMPARYPGSEAGQAGVEPCAPQAVDALRLGRRTVWREVGRTGVIALGRKTWSTSAGDFGLFELEACEFGERALAPDASGTATHEPAREGDTDERA

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP009556_1	1.2\|2327458\|23\|NZ_CP009556\|CRISPRCasFinder	2327458-2327480	23	KX156762	Staphylococcus phage vB_SauS_IMEP5, complete genome	24814-24836	2	0.913

1. spacer 1.2|2327458|23|NZ_CP009556|CRISPRCasFinder matches to KX156762 (Staphylococcus phage vB_SauS_IMEP5, complete genome) position: , mismatch: 2, identity: 0.913

attccaagctgaccatatccaca	CRISPR spacer
attccaagctgaccatatccaag	Protospacer
********************* .

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP009555

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP009556

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection