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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP009588 Burkholderia mallei strain 11 chromosome II, complete sequence 2 crisprs csa3,cas3 0 0 5 0
NZ_CP009587 Burkholderia mallei strain 11 chromosome I, complete sequence 0 crisprs cas3,DEDDh,csa3,DinG 0 0 9 0

Results visualization

1. NZ_CP009588
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009588_1 1435666-1435811 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009588_2 1670774-1670866 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 805340 : 848773 32 Agrobacterium_phage(20.0%) plate,transposase NA
DBSCAN-SWA_2 974236 : 1011563 28 Escherichia_phage(37.5%) holin,transposase NA
DBSCAN-SWA_3 1305379 : 1358111 39 Organic_Lake_phycodnavirus(25.0%) plate,transposase NA
DBSCAN-SWA_4 1810522 : 1862847 46 Leptospira_phage(25.0%) portal,integrase,transposase attL 1834966:1834985|attR 1852906:1852925
DBSCAN-SWA_5 1931537 : 1981219 39 Leptospira_phage(25.0%) plate,transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP009587
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 266764 : 314899 42 Streptococcus_phage(28.57%) plate,transposase NA
DBSCAN-SWA_2 750886 : 755805 6 Burkholderia_phage(33.33%) transposase,protease,portal,terminase NA
DBSCAN-SWA_3 1261492 : 1318875 50 Vibrio_phage(17.65%) transposase,protease,portal,tRNA NA
DBSCAN-SWA_4 1473583 : 1482820 7 Hokovirus(16.67%) NA NA
DBSCAN-SWA_5 1528730 : 1564424 31 Leptospira_phage(25.0%) transposase,protease NA
DBSCAN-SWA_6 1850762 : 1859604 8 Bacillus_phage(16.67%) NA NA
DBSCAN-SWA_7 1882485 : 1940170 55 Streptococcus_phage(16.67%) transposase,protease NA
DBSCAN-SWA_8 2234454 : 2304573 57 Leptospira_phage(28.57%) plate,transposase,coat NA
DBSCAN-SWA_9 3213463 : 3279240 47 Streptococcus_phage(36.36%) transposase,protease NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage