CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP009602	Burkholderia thailandensis 2002721643 chromosome II, complete sequence	1 crisprs	csa3,cas3,DinG	0	0	5	0
NZ_CP009601	Burkholderia thailandensis 2002721643 chromosome I, complete sequence	1 crisprs	WYL,cas3,cas4,DEDDh,csa3,DinG	0	0	11	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP009602_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009602_1

576904-576995

Orphan

Consensus_repeat	Method
CGCTTCCGCCTTGCGCGCGTCGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP009602_1

>merge|NZ_CP009602|1|576904-576995|CRISPRCasFinder
CGCTTCCGCCTTGCGCGCGTCGCCGTCGTGCCTGCGGTGCCTGTCGTCGTCGGCCGTGCGCTTCGCGCCCGCTTCGGCCTTGCGCGCGTCGC

>NZ_CP009602|1|1|576904-576995|CRISPRCasFinder
CGCTTCCGCCTTGCGCGCGTCGC	CGTCGTGCCTGCGGTGCCTGTCGTCGTCGGCCGTGCGCTTCGCGCC
CGCTTCGGCCTTGCGCGCGTCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009602.1\|WP_009896595.1\|577829_578339_-\|winged-helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|183009
NZ_CP009602.1\|WP_127446362.1\|582968_583250_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009602.1\|WP_011401144.1\|571095_572403_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340929
NZ_CP009602.1\|WP_009896587.1\|565805_566666_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|377216
NZ_CP009602.1\|WP_009907539.1\|570153_571044_-\|amidohydrolase-family-protein	unknown	unknown	gnl\|CDD\|226145
NZ_CP009602.1\|WP_009896599.1\|580201_580555_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009602.1\|WP_009896591.1\|572452_573178_-\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225099
NZ_CP009602.1\|WP_009896600.1\|580642_581284_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009602.1\|WP_019255458.1\|573378_574641_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340877
NZ_CP009602.1\|WP_011401141.1\|566828_568460_-\|cytochrome-c-methylamine-utilization-protein	unknown	unknown	gnl\|CDD\|224771
NZ_CP009602.1\|WP_011401142.1\|568456_569935_-\|ser/threonine-protein-phosphatase	unknown	unknown	gnl\|CDD\|277318
NZ_CP009602.1\|WP_009896593.1\|574996_575617_+\|HAD-hydrolase-like-protein	unknown	unknown	gnl\|CDD\|319799
NZ_CP009602.1\|WP_009896604.1\|585253_587284_-\|BCCT-family-transporter	unknown	unknown	gnl\|CDD\|376718
NZ_CP009602.1\|WP_009907543.1\|578531_579548_+\|1-aminocyclopropane-1-carboxylate-deaminase	unknown	unknown	gnl\|CDD\|183494
NZ_CP009602.1\|WP_009896605.1\|587623_588559_+\|MurR/RpiR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224651
NZ_CP009602.1\|WP_011401150.1\|581461_582853_-\|alkaline-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|293737
NZ_CP009602.1\|WP_009896586.1\|565219_565492_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009602.1\|WP_009896603.1\|583789_584980_+\|serine-hydrolase	unknown	unknown	gnl\|CDD\|365903
NZ_CP009602.1\|WP_009896602.1\|583274_583616_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009602.1\|WP_011401139.1\|564702_564915_-\|DUF3079-domain-containing-protein	unknown	unknown	gnl\|CDD\|337966

Protein	Function_ID	Function_description	E-value
NZ_CP009602.1\|WP_009896595.1\|577829_578339_-\|winged-helix-turn-helix-transcriptional-regulator	gnl\|CDD\|183009	PRK11169, PRK11169, leucine-responsive transcriptional regulator Lrp.	6.18054e-47
NZ_CP009602.1\|WP_009896587.1\|565805_566666_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|377216	pfam04072, LCM, Leucine carboxyl methyltransferase. Family of leucine carboxyl methyltransferases EC:2.1.1.-. This family may need divides a the full alignment contains a significantly shorter mouse sequence.	4.81736e-51
NZ_CP009602.1\|WP_009907539.1\|570153_571044_-\|amidohydrolase-family-protein	gnl\|CDD\|226145	COG3618, COG3618, Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only].	1.26079e-68
NZ_CP009602.1\|WP_009896591.1\|572452_573178_-\|GntR-family-transcriptional-regulator	gnl\|CDD\|225099	COG2188, PhnF, Transcriptional regulators [Transcription].	5.37598e-59
NZ_CP009602.1\|WP_019255458.1\|573378_574641_+\|MFS-transporter	gnl\|CDD\|340877	cd17319, MFS_ExuT_GudP_like, Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily. This family is composed of predominantly bacterial transporters for hexuronate (ExuT), glucarate (GudP), galactarate (GarP), and galactonate (DgoT). They mediate the uptake of these compounds into the cell. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.64768e-73
NZ_CP009602.1\|WP_011401141.1\|566828_568460_-\|cytochrome-c-methylamine-utilization-protein	gnl\|CDD\|224771	COG1858, MauG, Cytochrome c peroxidase [Inorganic ion transport and metabolism].	2.48399e-82
NZ_CP009602.1\|WP_011401142.1\|568456_569935_-\|ser/threonine-protein-phosphatase	gnl\|CDD\|277318	cd00839, MPP_PAPs, purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	2.48527e-09
NZ_CP009602.1\|WP_009896593.1\|574996_575617_+\|HAD-hydrolase-like-protein	gnl\|CDD\|319799	cd04303, HAD_PGPase, phosphoglycolate phosphatase, similar to Synechococcus elongates phosphoglycolate phosphatase PGP/CbbZ. Phosphoglycolate phosphatase catalyzes the dephosphorylation of phosphoglycolate; its activity requires divalent cations, especially Mg++. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	1.36094e-67
NZ_CP009602.1\|WP_009896604.1\|585253_587284_-\|BCCT-family-transporter	gnl\|CDD\|376718	pfam02028, BCCT, BCCT, betaine/carnitine/choline family transporter.	0
NZ_CP009602.1\|WP_009907543.1\|578531_579548_+\|1-aminocyclopropane-1-carboxylate-deaminase	gnl\|CDD\|183494	PRK12390, PRK12390, 1-aminocyclopropane-1-carboxylate deaminase; Provisional.	0
NZ_CP009602.1\|WP_009896605.1\|587623_588559_+\|MurR/RpiR-family-transcriptional-regulator	gnl\|CDD\|224651	COG1737, RpiR, Transcriptional regulators [Transcription].	1.09348e-55
NZ_CP009602.1\|WP_011401150.1\|581461_582853_-\|alkaline-phosphatase-family-protein	gnl\|CDD\|293737	cd16013, AcpA, acid phosphatase A. Acid phosphatase A catalyzes the hydrolysis reaction via a phosphoseryl intermediate to produce inorganic phosphate and the corresponding alcohol, optimally at low pH. AcpA hydrolyzes a variety of substrates, including p-nitrophenylphosphate (pNPP), p-nitrophenylphosphorylcholine (pNPPC), peptides containing phosphotyrosine, inositol phosphates, AMP, ATP, fructose 1,6-bisphosphate, glucose and fructose 6-phosphates, NADP, and ribose 5-phosphate. AcpA is distinct from histidine ACPs and purple ACPs, as well as class A, B, and C bacterial nonspecific ACPs.	2.05264e-98
NZ_CP009602.1\|WP_011401144.1\|571095_572403_-\|MFS-transporter	gnl\|CDD\|340929	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Acinetobacter sp. Cis,cis-muconate transport protein (MucK), Escherichia coli putative sialic acid transporter 1, and similar proteins. MucK functions in the uptake of muconate and allows Acinetobacter calcoaceticus ADP1 (BD413) to grow on exogenous cis,cis-muconate as the sole carbon source. The MucK subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.05988e-132
NZ_CP009602.1\|WP_009896603.1\|583789_584980_+\|serine-hydrolase	gnl\|CDD\|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	1.29202e-55
NZ_CP009602.1\|WP_011401139.1\|564702_564915_-\|DUF3079-domain-containing-protein	gnl\|CDD\|337966	pfam11278, DUF3079, Protein of unknown function (DUF3079). This family of proteins with unknown function appears to be restricted to Proteobacteria.	1.88329e-34

>NZ_CP009602.1|WP_009896593.1|574996_575617_+|HAD-hydrolase-like-protein
MAYKLIAFDFDGTLADSLACFLLALSESARQHGFRAIDGALLPQVRGMSAHEIVKLLGVPPWKVPLIAADMRRRMHARASDVRLFAGIDATLRALAQRGTRIAIATSNSEAVVRAIAGPATCAHIRHFSCGISLFGKARRLRALAHASGFACADVLYVGDEVRDAQAADRAGIAFRGVAWGYTAPDALQAHCRMPLIERPEELLAL
>NZ_CP009602.1|WP_019255458.1|573378_574641_+|MFS-transporter
MTKIARRLMPLLVIMFLIAFIDRQNVGFAKLQMVHALGMTETSYGLGASLFFIGYLLFEVPSTLALHRFGARLWLARIMMTWGVITVLLGFTHSTSVFYVFRFLLGVAEAGFYPGVIYYLTLWFPQSHRTRVLGLFTLGSALANMLGSLAGGLLLSLDGRLGLAGWQWVFVATGLPAVAVAFVALRYLPESVERATFLADDEKRVVLAALKREASPEAVSESPWRALVDPRVLMFALAYMLMSTSLYGVTYWLPTLLKSSGVPASLNGLLNMIPWAIAALLLLWLPARLKRERLVLKAMAIVAGVGVAGFALSLALPGLPLRFAALVLGGACIPLLYPCFWSLPPRFFSGARAAASIAAINSIGNLGGFFAQNLMPYVGKAAGSTSAPMLVPVVCLAALGVGMLAAASVAGRRRAAGMAA
>NZ_CP009602.1|WP_009896591.1|572452_573178_-|GntR-family-transcriptional-regulator
MHATDDRLPRYQRLRDELAALIAARHWRPGEAIPTEQALAKRYDVAIGTVRKAVDLLVADGMLERFQGRGTFVRRASFDSSLFRFFRFQSKHGERRIPESRILRREVVEATSAVAAALQIPARAPVIEMTRVRLIDGAPMLAEEIWLPYDRFAAFSRLELDSIGDLLYPVYEAHCNQIVASATETLTVEAIGPAHARLLRIEPGTPAVVIERLAYGYDRRPLEWRRSRGPASEFIYQAEIR
>NZ_CP009602.1|WP_011401144.1|571095_572403_-|MFS-transporter
MFEWFATVSLRERRTFWACFGGWALDALDMQMFSLVIPAIVAEWSLSRTQAGFVGGATLVASAIGGWVAGMLSDRFGRVRTLQWTIACFAVGTFACAFATSYPQFVVLKALQGAGFGGEWAAGAVLMAETIRAEHRGKAMGAVQSAWALGWAAAVLLYALAFSLMPAALAWRAMFAIGLLPALLIVYVRRGIVEPSVSASSPSNTPAAARASVPLVGIFSRDTRRMTLIGALLGVGAHGGYYALMTWLPTYLKVERHLSVLGTGGYLAVIIVAFFCGCIASAQLLDRIGRRGTILAFAACCIATVIAYLFLPLGNAAMLVLGFPLGFFAAGIPASMGALFNELYPRGTRGTGVGFCYNFGRVASAGFPVLVGHMSADMPLGTAIGIDAAIAYSIVVVAVLLLPETRARALDDLAVAHATADARADRIGAPGARHR
>NZ_CP009602.1|WP_009907539.1|570153_571044_-|amidohydrolase-family-protein
MSGQEWSACAHAAAMRRAASDITAIDAHAHVFETGLPLAGRRRYAPDYDAPLDAYLAQLDAHRVSHGVLVQPSFLGSDCRYLLRALAQQPRRLRGVAVIDAGCEPHVLDTLDRAGVVGIRLNLIGMPDPALDGPAWRATLERIAALRWHVELHAQAQRLGRLIAPLLAHRVNVVVDHFGRPNPACGIADAGFRDLLRTAATRRVWVKVSGVYRNWPLAPGEANARAQEAFDALAAEFGAERLVWGSDWPHTQFERTETFGRAFALARQWMRDDAMRRAIFVETPARLFRFGELHGA
>NZ_CP009602.1|WP_011401142.1|568456_569935_-|ser/threonine-protein-phosphatase
MPRPILRRAAALLPTLASAALLQACTSSIDNQPDAASASANIQAAWVEIGDANQAIARVITSYAPPAAAPGEAAPAVCPQLNADGKIARMTLRAAAGTAAQRPTASDPADSKPSGFPVSVCEATVPANAKGVTVAGRALPLPKAEPQRVAIIADTGCRMKKADNAFQACSDATVWPFATIAASVAKLNPDLVLHVGDYHYRENACPPDIAGCKNSPWGYGWDAWRADLFEPAAPLLAKAPWVVVRGNHEECARAGQGWFRFLDPRPYSDARSCNDPANDGNANYSEPYAVPLGTGSQVIVFDTAKVGRAALKTTDVQFQIYQKQFQTVAALANKPGMSTTIFTNHHPILAFAPIPGSTPAPGNLALQSVMSSLYAQAYYPPGVQIALHGHVHDFQAINFASGHPATIVSGNGGDNLDVALPDPFPANLTPAPGVVIDKLSHNNSFGFLIMERRAAPARGWTFKAYTAAGKLLASCDQAGTTLTCDKTGFVAP
>NZ_CP009602.1|WP_011401141.1|566828_568460_-|cytochrome-c-methylamine-utilization-protein
MTGRRRSSAARRAVPAAALTARASVTAFALGPAALGTTRTRRTVLTLSTIVRAACGALAACASAIALASGPAAPDATHSTHAARPASAASSTSPMNPTSTPGASGPAHAKAALDAARAKAAPPSPPTTVLLPGAPPERVVDTIGRGTPQVASKVDPTAAVFRPDPTLAALGKRVFFDPALSEPRGMSCASCHDPGRAFAPTLSPAALAGPRVPQGSRPGHFSRRNAPSLLYVRYVPRRHFYQDDDALAPAPFGGLFSDGRADTLAEQLRGPLFDPDEMNNASAAALMRKIGRTGLGAALAGRFGPSVRRDPERMVRVLGEAMQAYLQSDEMAPFSSRYDAYVTKRAPLTPQEMRGLALFRNPDKGNCMSCHTLSDTASRPERSLFTDFGYDAIAVPRNRALPANRDPRHFDNGLCDTAAKLRWPEPTQWCAYLRTPGLRNVAIKESFMHNGVFDTLRDAVAFYNTRSTDPARWYHGRDTFDDVPRAYRGNVNVNSTPMNRRPGTPPAMTDADVDDLVAFLRTLTDARYVGLMPTAPDGKAARP
>NZ_CP009602.1|WP_009896587.1|565805_566666_-|class-I-SAM-dependent-methyltransferase
MSNQSIAAPDSTAVRVALWRALHVEIDAPPHVLDDGIGLELAAPDDDWRSRPDMAPQATRGYRASIVGRARFVEDLIGEQAERGVAQYVVLGAGLDTFAQRRAKLASHLRVFEIDQPGTQAWKRQRLIALGYGVPEWLRLVPVDFEASGAWRAQLSAAGFDDSRPAVVSSTGVSMYLTRDAIAGTLRRIATLAPGSTLAMTFLLPLELIDDPAERAQHAAVYERARAAGTPFVSFFSPAEMLALAREAGFREVRHVSTDDLVRRYFEGRPDGLRPSSGEAFLVAST
>NZ_CP009602.1|WP_009896586.1|565219_565492_-|hypothetical-protein
MEHLVRIVNDTDRQILAWLRNQVGDERVERAAQHMGRVRKPYLSAVCRYLGVWPPISLRYQTRRAEVDHAVGDRYLTLIRQHLATHAASR
>NZ_CP009602.1|WP_011401139.1|564702_564915_-|DUF3079-domain-containing-protein
MAKKFPLHPKHPERNCWGCDRYCSVDALSCGNGSDRTQHPVELLGDDWYEWEQENEAAQKQMQQTQAAAR
>NZ_CP009602.1|WP_009896595.1|577829_578339_-|winged-helix-turn-helix-transcriptional-regulator
MCATKKSAPKAAAQPAGADIDRVDRAILRMLQRDASISNVALAAKVNLSAPACLRRVERLKEMGLIRGIVALLEPKALNAGMLVMIGVVLDRSTPDSFGAFEQAAQKVSGCMECHVVTGEFDYIMLIRTRDSDTFNRLHAEQLLYLPGVRQIRTFVVLKEILSTTSFPI
>NZ_CP009602.1|WP_009907543.1|578531_579548_+|1-aminocyclopropane-1-carboxylate-deaminase
MNLQKFPRYPLTFGPTPIQPLKRLSAHLGGKVELYAKRDDCNSGLAFGGNKTRKLEYLIPDALAQGCDTLVSIGGIQSNQTRQVAAVAAHLGMKCVLVQENWVNYHDAVYDRVGNIQMSRMMGADVRLVPDGFDIGFRKSWEDALADVRARGGKPYAIPAGCSDHPLGGLGFVGFAEEVRAQEAELGFKFDYVVVCSVTGSTQAGMVVGFAADGRADRVIGIDASAKPAQTREQILRIARNTADRVELGRDIASGDVVLDERFGGPEYGLPNEGTLEAIRLCAKLEGVLTDPVYEGKSMHGMIEKVRLGEFPAGSKVLYAHLGGVPALNAYSFLFRDG
>NZ_CP009602.1|WP_009896599.1|580201_580555_+|hypothetical-protein
MGFVGGERRRARIAESNEIDGATLITKVASEPLAALGGARSEATPPLTLYGAYRQGFADYLAGRPNPYRIGSRLAGIWHEGHAEAASNDALDFTARARTCGGARTAANPVAFFRRRR
>NZ_CP009602.1|WP_009896600.1|580642_581284_-|hypothetical-protein
MKIRSGLVAELTVNLLLPWAAYRAAAPHWGETGGLIASAVPPLAWSVIELARFRRIDALSAVVLFGIVLSIAAALAGGSPRMLLMRESLASGAIGVAFLGSLALRKPLVFHLARATIAREAHDGAARIDALWAERPAFVSAMRLMTLVWGSGLVAENLLRAWMVWNWPVERVLVVAPFVGYGIYGALMLWTLWYRKVMRAHALAGLPRGGALG
>NZ_CP009602.1|WP_011401150.1|581461_582853_-|alkaline-phosphatase-family-protein
MAKILENVEHIVVVMFENRSFDTMLGWLYPPGTQPAHVLPARGSPQFDGLKPDMSNPSRAGKTIAVTREATNNVIPDPQETFVNVTSQILGPGGAGNPWPPMQGFVVNYETTRTSDPGHVMQCHSVAQLPTLTALARAYAVSDAWFASVPSQTWPNRAFAHAGTSNGHVNNGAIPDPLEWDVPTIFDVLSSIGASWAVYSDTAVTPSLTHTMFPSLWNDKYADNFERFPDFVAACKNDALPRYAFVEPSFLFEPNDQHPPHDVLAGDKFLHDIWTAISTSPGWPRTLLVVTYDEHGGCFDHVLPPANATPPDAASNPGDETFEFDRFGVRVPAVVVSPYIEAGTVFRSPTNVPYDHTSILATLRDWLAIAPDKMLKSARIANAPTLAQLFTRSVPRGDLPAIAAPSADFVQPPPSAPLNDLQKSLVTGTSRRDGNDPAASVAPIATRQHALDFFTRRATAKPT
>NZ_CP009602.1|WP_127446362.1|582968_583250_-|hypothetical-protein
MTTEPARASGGARSFTHRADRAAIRRHRQRHLRHQRGYRRNESVFMGGGANSAPGDEFAAMIETAPARAHPPARRVAGTPAAPPCFSRNIGYT
>NZ_CP009602.1|WP_009896602.1|583274_583616_-|hypothetical-protein
MIAPATPAALAAGATTFAEWAALGTLALLYLFGLGWSLRGALARSRGRAYWLACAALIAGGTACALLAKPSAPNSGEMPPGFGLGVLVVMLGIAGTTAGCAWQAIARLRHGQR
>NZ_CP009602.1|WP_009896603.1|583789_584980_+|serine-hydrolase
MNLESVTPATAAAAATDHAAVAGRLDRVFATALAERRVVGAVALVARGGELVYRRAHGFAERETQRPMREDTLFRLSSITKPIVTVAVLRLVAAGRMALDAPITRWLPEFAPALPDGRAPALTVHQLLTHTAGLSYWLLEAPGSAYHTLGISDGIDLVDFDLAENLRRIAAAPLAFEPGSAWRYSLALDVLGAAIERETGLALPDAVAQLVTTPLGLRDTGFVAADPARFAAAYANAAPQPVRITDNLDVPLPEGHGVAVRFAPSRVFDATAFASGGAGMYGSADDVLRVLETIRTGGDGFLPAALAAAMRTDHTGPAAETRGPGWGFGYGGAVLSDPARAQSPQSAGTLQWGGVYGHSWFVDAARGLTVLLMTNTAYEGMSGPLTVEVRDAVYAV
>NZ_CP009602.1|WP_009896604.1|585253_587284_-|BCCT-family-transporter
MPSSRSAPRTTLKPQVVVPSLAVIGALLAVCALLPNEAGALFGAGQQWIVERFDWFYVLAITTFLIFIVLIAASRFGNIKLGPDDAEPEFSFVSWTAMLFAAGMGIGLMYFGVGEPIQHYLKPPTALGGTPAAAREAMLMSFFHWGLHAWATYGVMGLVLAYFGFRYNLPLTLRSGLYPVLREGVNGWIGHTVDAFALVGTVAGIAVTLGYGVLQLSAGLHTIAGWQTDSDAFRIGLVAVVVALAGLSAASGLDKGVRRLSELNLMLAFALLAFVVVAGPTSFLLRAFGDNVGEYLSKLVSLSFRTYAYEAPNDKGWFGGWTLLYWAWWVSWSPFVGMFIARISRGRTIREFVIGVLLVPTAFNLVWMTAFGNSAIWLDTHAAAGALAQTATNVDALLFRFFDYLPLTQLLSVAAIVLIAVFFVTSADSGAFVIDAIATRGAPHSPVWQRLFWAAVLGVTASVLLVAGGLKALQALTLVAALPVALVMLALCYGLWRGLKADHAHYSQEMAPATSFWTGQHWRQRLSQILRHTTGADARRFIAQTVEPALRKVAEELKAGGVDAHVARDDDDAVRLTVPAPAQRDFVYGARVSRKSAPAFRIREAAEPEPQREHVCEVLTFFADGRLGYDIEYLRGDEIIADVLRQYERYVSLASDTRTHLLNRAPEHAGPDGLTQ
>NZ_CP009602.1|WP_009896605.1|587623_588559_+|MurR/RpiR-family-transcriptional-regulator
MSDSPDSPPDAEPSIAARIAAVLPSLTPIHRRMGEYVLANPFRAATMRIDELANAVDASIATANRFARALGFDGYPALRAALVRGFEATLAPVERLRSAQEHEAGARGGELIDASFEQALANLERTRARLDRANVEAAVDSLLAARRIFIVGMGASAFLAGLMEHGLSVYRDNVQSLALLGGPTDAARRLFSARGDDLVVAIAFPRYVHDTIELTRRAAERGAPVLAITDGPDSPVAPFAARALFVHAERRLAATSEAAVLALVEALIDALAHRSQRSARAAAEVTEFMLPWLEARGACAAPPRRSRKTDR

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

473058 : 558932

Burkholderia_virus(66.04%)

terminase,tail,protease,holin,capsid,portal,transposase,head,integrase

attL 478095:478115|attR 553842:553862

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099005207.1\|473058_473816_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_009896426.1\|474024_474729_+	YceH family protein	NA	NA	NA	NA
WP_009896427.1\|474995_475808_-	AraC family transcriptional regulator	NA	NA	NA	NA
WP_009896429.1\|475903_476155_+	hypothetical protein	NA	NA	NA	NA
WP_009896431.1\|476447_477680_-	GlxA family transcriptional regulator	NA	NA	NA	NA
WP_009907526.1\|477968_479354_+	L-serine ammonia-lyase	NA	NA	NA	NA
478095:478115	attL	NA	NA	NA	NA
WP_009896433.1\|479370_480615_+	sarcosine oxidase subunit beta family protein	NA	NA	NA	NA
WP_009896434.1\|480743_481037_+	sarcosine oxidase subunit delta	NA	NA	NA	NA
WP_009896435.1\|481033_484042_+	sarcosine oxidase subunit alpha family protein	NA	NA	NA	NA
WP_011401100.1\|484031_484667_+	sarcosine oxidase subunit gamma	NA	NA	NA	NA
WP_009896437.1\|484666_485128_+	dihydroneopterin aldolase	NA	NA	NA	NA
WP_009896439.1\|485406_485619_-	30S ribosomal protein S21	NA	NA	NA	NA
WP_009896440.1\|486269_486473_+	cold-shock protein	A0A2H4N7Y6	Lake_Baikal_phage	4.5e-19	65.7
WP_009896441.1\|486673_486889_+	hypothetical protein	NA	NA	NA	NA
WP_009896443.1\|487181_487628_-	DUF3761 domain-containing protein	NA	NA	NA	NA
WP_009896448.1\|487900_488161_+	hypothetical protein	NA	NA	NA	NA
WP_080555063.1\|488383_488689_+	glyoxylate reductase	NA	NA	NA	NA
WP_009896451.1\|488728_489214_+	peroxiredoxin	NA	NA	NA	NA
WP_025370236.1\|489741_491892_+	PAS domain S-box protein	A0A1V0SGX0	Hokovirus	2.7e-16	29.0
WP_009896454.1\|491917_492370_+	response regulator	NA	NA	NA	NA
WP_009896456.1\|492366_493845_+	PAS domain-containing protein	NA	NA	NA	NA
WP_011401103.1\|493908_495105_-	MFS transporter	NA	NA	NA	NA
WP_004548994.1\|495129_496257_-\|integrase	tyrosine-type recombinase/integrase	A0A0U4JIT5	Pseudomonas_phage	1.9e-50	35.3
WP_076881460.1\|496246_496456_-	hypothetical protein	NA	NA	NA	NA
WP_009896459.1\|496492_498247_-	hypothetical protein	Q8W6R3	Burkholderia_virus	2.6e-94	100.0
WP_009896461.1\|498261_498540_-	hypothetical protein	Q6JII7	Burkholderia_virus	9.0e-42	91.3
WP_009896463.1\|498539_498935_-	hypothetical protein	Q6JII6	Burkholderia_virus	3.3e-66	96.9
WP_009896464.1\|498937_499609_-	hypothetical protein	Q8W6Q9	Burkholderia_virus	2.5e-122	97.3
WP_009896465.1\|499622_500330_-	hypothetical protein	Q8W6Q8	Burkholderia_virus	2.9e-121	99.1
WP_009896467.1\|500591_501404_-	prohibitin family protein	Q8W6Q7	Burkholderia_virus	2.7e-139	94.4
WP_011401105.1\|502142_502418_-	hypothetical protein	Q8W6Q1	Burkholderia_virus	6.8e-42	93.4
WP_009896479.1\|503302_503695_-	hypothetical protein	Q8W6P8	Burkholderia_virus	7.1e-69	100.0
WP_076912134.1\|503780_504023_+	Cro/Cl family transcriptional regulator	C7BGF8	Burkholderia_phage	5.4e-27	76.4
WP_011401108.1\|504145_504478_+	hypothetical protein	Q6JIG8	Burkholderia_virus	9.3e-54	94.5
WP_004526644.1\|504474_504693_-	hypothetical protein	A4JX47	Burkholderia_virus	1.9e-31	98.6
WP_009896483.1\|504907_505348_+	hypothetical protein	Q6JIG6	Burkholderia_virus	2.9e-79	100.0
WP_102815692.1\|505358_506555_+	DNA cytosine methyltransferase	Q6J1P4	Burkholderia_virus	1.6e-111	55.0
WP_009896486.1\|506551_507688_+	site-specific DNA-methyltransferase	Q8W6P4	Burkholderia_virus	3.0e-224	98.9
WP_009896489.1\|507684_508683_+	phosphoadenosine phosphosulfate reductase family protein	Q8W6P3	Burkholderia_virus	1.0e-196	100.0
WP_009896491.1\|508717_509539_+	hypothetical protein	Q8W6P2	Burkholderia_virus	1.8e-146	99.6
WP_004526650.1\|509535_509796_+	helix-turn-helix domain-containing protein	Q6JIG2	Burkholderia_virus	4.2e-41	100.0
WP_015967393.1\|509949_510942_+	hypothetical protein	Q8W6P0	Burkholderia_virus	1.4e-177	100.0
WP_011401112.1\|510938_511490_+	DUF1064 domain-containing protein	A4JX56	Burkholderia_virus	2.6e-93	96.2
WP_009896497.1\|511486_511843_+	hypothetical protein	Q8W6N8	Burkholderia_virus	2.1e-59	100.0
WP_011401114.1\|512282_512615_+	hypothetical protein	Q8W6N6	Burkholderia_virus	1.8e-60	100.0
WP_009896498.1\|512590_512851_+	hypothetical protein	Q8W6N5	Burkholderia_virus	5.3e-36	81.4
WP_009896499.1\|512847_513291_+	hypothetical protein	NA	NA	NA	NA
WP_004549731.1\|513340_513610_+	BrnT family toxin	NA	NA	NA	NA
WP_011401115.1\|513593_513878_+	BrnA antitoxin family protein	K4NZP3	Burkholderia_phage	6.4e-11	51.4
WP_025404174.1\|514508_514988_+\|terminase	terminase small subunit	Q3HQS6	Burkholderia_phage	8.2e-59	82.8
WP_011401117.1\|514987_516730_+\|terminase	terminase large subunit	Q3HQS7	Burkholderia_phage	2.8e-290	84.5
WP_009896509.1\|516737_518033_+\|portal	phage portal protein	Q3HQS8	Burkholderia_phage	4.5e-229	90.7
WP_011401119.1\|518010_518853_+\|protease	Clp protease ClpP	Q3HQS9	Burkholderia_phage	7.0e-138	91.4
WP_025404175.1\|518857_520135_+\|capsid	phage major capsid protein	Q3HQT0	Burkholderia_phage	2.2e-207	85.8
WP_009896515.1\|520374_520716_+\|head,tail	phage gp6-like head-tail connector protein	Q3HQT2	Burkholderia_phage	2.7e-40	76.1
WP_009896516.1\|520718_521048_+\|head	phage head closure protein	A4JX04	Burkholderia_virus	1.5e-40	75.0
WP_011401121.1\|521040_521463_+	HK97 gp10 family phage protein	Q6JIM3	Burkholderia_virus	3.3e-64	91.4
WP_009896520.1\|521459_521807_+	hypothetical protein	A4JX06	Burkholderia_virus	5.9e-59	98.3
WP_009896521.1\|521869_522328_+	hypothetical protein	Q8W6T9	Burkholderia_virus	8.1e-64	83.6
WP_009896522.1\|522355_522820_+\|tail	tail assembly protein	Q6JIM0	Burkholderia_virus	1.9e-81	96.1
WP_004526674.1\|522819_523104_+	DUF4035 domain-containing protein	Q6JIL9	Burkholderia_virus	6.8e-45	100.0
WP_009896523.1\|523117_527218_+\|tail	phage tail tape measure protein	Q6JIL8	Burkholderia_virus	0.0e+00	96.9
WP_009896524.1\|527214_527553_+\|tail	phage tail protein	Q8W6T5	Burkholderia_virus	2.3e-60	99.1
WP_009896526.1\|527561_528968_+\|tail	tail fiber domain-containing protein	Q6JIL6	Burkholderia_virus	1.3e-250	90.6
WP_009896528.1\|528964_529648_+\|tail	phage minor tail protein L	Q6JIL5	Burkholderia_virus	3.8e-134	99.6
WP_009896529.1\|529697_530450_+	C40 family peptidase	Q6JIL4	Burkholderia_virus	1.5e-139	93.2
WP_009896531.1\|530446_531031_+\|tail	tail assembly protein	Q8W6T1	Burkholderia_virus	2.5e-94	93.3
WP_011401124.1\|531027_534333_+\|tail	phage tail protein	A4JX16	Burkholderia_virus	0.0e+00	97.7
WP_080511277.1\|534640_535357_+	hypothetical protein	C7BGD6	Burkholderia_phage	3.2e-131	93.7
WP_009896536.1\|535410_535695_+\|holin	holin	C7BGD7	Burkholderia_phage	3.3e-39	95.7
WP_009896538.1\|535697_536147_+	hypothetical protein	C7BGD8	Burkholderia_phage	3.9e-71	92.6
WP_043288963.1\|536143_536626_+	DUF2514 family protein	C7BGD9	Burkholderia_phage	2.3e-53	72.5
WP_009896543.1\|536764_537553_+	DNA adenine methylase	Q8W6S4	Burkholderia_virus	1.5e-155	99.6
WP_011401129.1\|537655_538552_+	hypothetical protein	C7BGE2	Burkholderia_phage	2.3e-155	93.6
WP_009896547.1\|538596_538800_-	hypothetical protein	NA	NA	NA	NA
WP_009896550.1\|538796_539258_-	hypothetical protein	NA	NA	NA	NA
WP_009896554.1\|539425_539767_-	MFS transporter	NA	NA	NA	NA
WP_009896555.1\|540000_543378_-	hypothetical protein	NA	NA	NA	NA
WP_009896556.1\|544428_546126_-\|holin	choline dehydrogenase	A0A1V0S9M4	Catovirus	6.5e-50	29.2
WP_009899904.1\|546145_547615_-	betaine-aldehyde dehydrogenase	NA	NA	NA	NA
WP_009896559.1\|547661_548249_-	transcriptional regulator BetI	NA	NA	NA	NA
WP_009896560.1\|549246_550146_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_009896562.1\|550425_551703_+	glycosyltransferase	NA	NA	NA	NA
WP_009896564.1\|551699_553271_+	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA
WP_009896566.1\|553403_554369_+	glycosyltransferase family 2 protein	NA	NA	NA	NA
553842:553862	attR	NA	NA	NA	NA
WP_025404178.1\|554421_555984_+	efflux transporter outer membrane subunit	NA	NA	NA	NA
WP_025370239.1\|556178_557447_+	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_011401137.1\|557663_558932_-\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	9.8e-43	42.7

DBSCAN-SWA_2

844000 : 912050

Burkholderia_virus(60.0%)

terminase,tail,protease,holin,plate,capsid,lysis,portal,head

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_009896945.1\|844000_845989_+\|protease	ATP-dependent zinc metalloprotease FtsH	E5EQU5	Bathycoccus_sp._RCC1105_virus	1.1e-104	42.9
WP_009896948.1\|846095_846701_-\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA
WP_009896949.1\|846950_847292_-	hypothetical protein	NA	NA	NA	NA
WP_009896951.1\|847994_848486_+	NUDIX hydrolase	A0A0E3JJF3	Streptomyces_phage	1.7e-14	42.1
WP_009896955.1\|848482_848938_+	nucleoside 2-deoxyribosyltransferase	NA	NA	NA	NA
WP_009896957.1\|848939_849929_+	thymidylate synthase	NA	NA	NA	NA
WP_009896959.1\|849944_850685_+	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_009907667.1\|850886_851687_+	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA
WP_009896963.1\|851764_853195_+	thiamine pyridinylase	NA	NA	NA	NA
WP_009907668.1\|853275_854085_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_009896969.1\|854940_855420_+	carboxypeptidase regulatory-like domain-containing protein	NA	NA	NA	NA
WP_009896971.1\|855478_857992_+	cation-translocating P-type ATPase	M1I547	Acanthocystis_turfacea_Chlorella_virus	2.5e-58	29.4
WP_009896973.1\|858043_858667_+	hypothetical protein	NA	NA	NA	NA
WP_009896974.1\|858822_861258_-	HAD-IC family P-type ATPase	NA	NA	NA	NA
WP_009896976.1\|861498_862869_-	DUF3326 domain-containing protein	NA	NA	NA	NA
WP_009896978.1\|863020_863440_+	archease	NA	NA	NA	NA
WP_009896980.1\|863453_864887_+	RtcB family protein	A2RQD0	Archaeal_BJ1_virus	7.8e-105	45.0
WP_009896982.1\|864944_865205_+	hypothetical protein	NA	NA	NA	NA
WP_009896988.1\|865335_866040_+	hypothetical protein	NA	NA	NA	NA
WP_009896990.1\|866036_866471_+	GYD domain-containing protein	NA	NA	NA	NA
WP_009896992.1\|866579_867713_+	CapA family protein	S4VS02	Pandoravirus	4.2e-114	55.9
WP_009896994.1\|867828_870624_-	hsp70 family protein	A0A2H4UU19	Bodo_saltans_virus	5.0e-07	25.8
WP_009896996.1\|870627_872475_-	Hsp70 family protein	NA	NA	NA	NA
WP_009896998.1\|872471_873047_-	DUF2760 domain-containing protein	NA	NA	NA	NA
WP_009897000.1\|873361_874126_-	2-keto-4-pentenoate hydratase	NA	NA	NA	NA
WP_154660029.1\|874115_874508_-	hypothetical protein	NA	NA	NA	NA
WP_009897002.1\|874712_875228_+	ProQ/FinO family protein	NA	NA	NA	NA
WP_009897004.1\|875241_875571_+	H-NS histone family protein	NA	NA	NA	NA
WP_009897009.1\|876543_877644_-	phage late control D family protein	A4JWS1	Burkholderia_virus	4.0e-202	99.5
WP_009897011.1\|877643_878069_-\|tail	phage tail protein	A4JWS2	Burkholderia_virus	9.7e-72	99.3
WP_009897013.1\|878086_881047_-	hypothetical protein	A4JWS3	Burkholderia_virus	0.0e+00	95.8
WP_004552648.1\|881049_881163_-\|tail	GpE family phage tail protein	A0A089FGX3	Burkholderia_phage	5.4e-14	100.0
WP_004531064.1\|881171_881516_-\|tail	phage tail assembly protein	K4NXA3	Burkholderia_phage	1.0e-55	100.0
WP_009897021.1\|881573_882083_-\|tail	phage major tail tube protein	K4NZR9	Burkholderia_phage	1.5e-90	95.3
WP_009897023.1\|882098_883271_-\|tail	phage tail sheath protein	Q45YG5	Burkholderia_virus	2.0e-223	99.7
WP_004533037.1\|883326_883998_-\|tail	phage tail fiber assembly protein	A4JWS8	Burkholderia_virus	9.2e-117	99.6
WP_009897025.1\|884014_886378_-	hypothetical protein	Q45YG3	Burkholderia_virus	0.0e+00	99.2
WP_009897027.1\|886388_886943_-\|tail	phage tail protein I	A4JWT0	Burkholderia_virus	3.8e-100	100.0
WP_004524450.1\|886935_887841_-\|plate	baseplate assembly protein	A4JWT1	Burkholderia_virus	3.6e-164	100.0
WP_004531058.1\|887837_888200_-\|plate	bacteriophage baseplate assembly protein W	K4PAX6	Burkholderia_phage	1.7e-61	100.0
WP_009897036.1\|888196_888877_-\|plate	phage baseplate assembly protein V	A4JWT3	Burkholderia_virus	1.8e-123	100.0
WP_011401235.1\|889050_889827_+	site-specific DNA-methyltransferase	A4JWT4	Burkholderia_virus	2.1e-149	100.0
WP_009897040.1\|889992_890523_-	hypothetical protein	K4NX96	Burkholderia_phage	3.0e-94	100.0
WP_004531055.1\|890649_891117_-	phage virion morphogenesis protein	K4NZQ8	Burkholderia_phage	1.2e-78	100.0
WP_004531054.1\|891113_891530_-\|tail	phage tail protein	A4JWT7	Burkholderia_virus	3.3e-72	100.0
WP_009897046.1\|891634_892075_-\|lysis	LysB family phage lysis regulatory protein	A4JWT9	Burkholderia_virus	2.8e-66	96.4
WP_009897048.1\|892071_892884_-	DUF3380 domain-containing protein	A4JWU0	Burkholderia_virus	4.5e-150	99.6
WP_004524440.1\|892880_893153_-\|holin	phage holin family protein	K4NX91	Burkholderia_phage	8.8e-42	100.0
WP_004524439.1\|893154_893499_-	membrane protein	K4NZQ3	Burkholderia_phage	2.9e-50	100.0
WP_004524438.1\|893513_893720_-\|tail	tail protein	K4PAW7	Burkholderia_phage	2.4e-31	100.0
WP_004524437.1\|893716_893968_-	hypothetical protein	K4NXI9	Burkholderia_phage	7.6e-40	100.0
WP_009897054.1\|893967_894447_-\|head	head completion/stabilization protein	K4NZV5	Burkholderia_phage	6.2e-75	92.5
WP_009897056.1\|894546_895236_-\|terminase	terminase endonuclease subunit	A4JWP8	Burkholderia_virus	5.6e-117	99.1
WP_009897058.1\|895232_896246_-\|capsid	phage major capsid protein, P2 family	K4NZP8	Burkholderia_phage	1.6e-189	99.7
WP_009897062.1\|896279_897089_-\|capsid	GPO family capsid scaffolding protein	A4JWU8	Burkholderia_virus	3.5e-147	99.3
WP_009897068.1\|897232_899002_+\|terminase	terminase ATPase subunit family protein	A4JWU9	Burkholderia_virus	0.0e+00	99.2
WP_009897070.1\|898998_900054_+\|portal	phage portal protein	A4JWV0	Burkholderia_virus	5.4e-204	98.9
WP_011401239.1\|900160_900433_+	BrnT family toxin	K4NX81	Burkholderia_phage	1.9e-44	97.8
WP_009897071.1\|900392_900665_+	BrnA antitoxin family protein	K4NZP3	Burkholderia_phage	4.5e-46	97.8
WP_011401240.1\|901222_902344_-	DUF3396 domain-containing protein	A4JWV3	Burkholderia_virus	1.4e-215	98.1
WP_009897075.1\|902352_903090_-	VRR-NUC domain-containing protein	A4JWV4	Burkholderia_virus	3.8e-132	98.8
WP_009897076.1\|903086_903620_-	bacteriophage gp29 protein	A4JWV5	Burkholderia_virus	2.4e-96	99.4
WP_009897078.1\|903722_903845_-	CopG family transcriptional regulator	A4JWV6	Burkholderia_virus	5.9e-14	100.0
WP_009897080.1\|904078_904732_-	AAA family ATPase	A4JWV7	Burkholderia_virus	1.2e-113	99.5
WP_004532731.1\|904832_905039_-	ogr/Delta-like zinc finger family protein	A4JWV8	Burkholderia_virus	8.7e-34	100.0
WP_004532697.1\|905035_905302_-	ogr/Delta-like zinc finger family protein	A4JWV9	Burkholderia_virus	1.0e-42	97.6
WP_009897085.1\|905317_907111_-	replication endonuclease	A4JWW0	Burkholderia_virus	0.0e+00	99.3
WP_043288967.1\|907110_908538_-	DNA cytosine methyltransferase	Q6V7R9	Burkholderia_virus	7.1e-66	38.3
WP_011401243.1\|908534_909656_-	phosphoadenosine phosphosulfate reductase family protein	Q8W6P3	Burkholderia_virus	2.3e-144	77.0
WP_009897093.1\|910011_910233_-	hypothetical protein	A4JWW6	Burkholderia_virus	1.6e-38	100.0
WP_004532752.1\|910548_911331_-	hypothetical protein	A4JWW8	Burkholderia_virus	6.7e-143	100.0
WP_009897097.1\|911711_912050_+	helix-turn-helix domain-containing protein	A4JWW9	Burkholderia_virus	5.4e-57	100.0

DBSCAN-SWA_3

1534822 : 1601486

Aeromonas_phage(25.0%)

plate,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_009898022.1\|1534822_1535773_-\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_009898024.1\|1536040_1536985_+	GlxA family transcriptional regulator	NA	NA	NA	NA
WP_009898026.1\|1537458_1539162_+	peptidase	NA	NA	NA	NA
WP_009898028.1\|1539280_1540507_+	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA
WP_009907969.1\|1540565_1541708_-	porin	NA	NA	NA	NA
WP_025404202.1\|1541935_1542973_-\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_009898034.1\|1542969_1544523_-\|holin	choline-sulfatase	NA	NA	NA	NA
WP_009898036.1\|1544685_1545558_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_009898038.1\|1545701_1546577_+	formyltetrahydrofolate deformylase	NA	NA	NA	NA
WP_009898039.1\|1546663_1548319_-	APC family permease	NA	NA	NA	NA
WP_009898041.1\|1548498_1549362_-	glycine betaine ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_009898043.1\|1549471_1550611_-	hybrid-cluster NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_009898044.1\|1550631_1551873_-	aromatic ring-hydroxylating dioxygenase subunit alpha	NA	NA	NA	NA
WP_009898046.1\|1551924_1552710_-	drug:proton antiporter	NA	NA	NA	NA
WP_009898048.1\|1552706_1553888_-	electron transfer flavoprotein subunit alpha/FixB family protein	NA	NA	NA	NA
WP_009898050.1\|1553892_1555818_-	(Fe-S)-binding protein	NA	NA	NA	NA
WP_009898052.1\|1555820_1557884_-	NADH:flavin oxidoreductase	NA	NA	NA	NA
WP_009898053.1\|1557944_1558478_-	4-vinyl reductase	NA	NA	NA	NA
WP_009898055.1\|1558625_1559597_-	membrane dipeptidase	NA	NA	NA	NA
WP_009898057.1\|1559668_1560943_-	serine hydroxymethyltransferase	A0A219Y950	Aeromonas_phage	6.9e-105	53.4
WP_009898058.1\|1561351_1562377_+	GlxA family transcriptional regulator	NA	NA	NA	NA
WP_009898059.1\|1562562_1563762_-	formaldehyde dehydrogenase, glutathione-independent	A0A2K9L7I1	Tupanvirus	1.1e-11	26.8
WP_009900983.1\|1564107_1565124_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_025404203.1\|1565397_1566882_+	glycoside hydrolase 68 family protein	NA	NA	NA	NA
WP_011401416.1\|1567000_1568674_+	glycoside hydrolase family 32 protein	F8WPR5	Bacillus_phage	3.0e-55	31.0
WP_025404204.1\|1569125_1570394_-	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_025404178.1\|1570588_1572151_-	efflux transporter outer membrane subunit	NA	NA	NA	NA
WP_009896566.1\|1572203_1573169_-	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_009896564.1\|1573301_1574873_-	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA
WP_009896562.1\|1574869_1576147_-	glycosyltransferase	NA	NA	NA	NA
WP_009896560.1\|1576426_1577326_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_009907980.1\|1577898_1578174_-	hypothetical protein	NA	NA	NA	NA
WP_011401419.1\|1578490_1578916_-	hypothetical protein	NA	NA	NA	NA
WP_009893756.1\|1578938_1579298_-	hypothetical protein	NA	NA	NA	NA
WP_009893757.1\|1579356_1582851_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_009893758.1\|1582847_1584575_-	OmpA family protein	NA	NA	NA	NA
WP_009893759.1\|1584657_1586019_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_009893760.1\|1586015_1586609_-	hypothetical protein	NA	NA	NA	NA
WP_009893761.1\|1586614_1587004_-	DUF4150 domain-containing protein	NA	NA	NA	NA
WP_009893763.1\|1587043_1587760_-	DUF3540 domain-containing protein	NA	NA	NA	NA
WP_009893765.1\|1587762_1588833_-	pentapeptide repeat-containing protein	NA	NA	NA	NA
WP_009893766.1\|1588832_1591049_-	DUF2169 domain-containing protein	NA	NA	NA	NA
WP_009893768.1\|1591052_1593341_-	type VI secretion system tip protein VgrG	NA	NA	NA	NA
WP_011401423.1\|1593509_1595801_-	type VI secretion system tip protein VgrG	NA	NA	NA	NA
WP_009893771.1\|1595791_1598635_-	type VI secretion system ATPase TssH	A0A2I7REQ1	Vibrio_phage	1.2e-61	27.0
WP_009893772.1\|1598637_1599627_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_009901011.1\|1599623_1601486_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA

DBSCAN-SWA_4

1739631 : 1745697

Burkholderia_virus(28.57%)

integrase

attL 1734491:1734506|attR 1754852:1754867

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1734491:1734506	attL	NA	NA	NA	NA
WP_009893915.1\|1739631_1740204_+\|integrase	site-specific integrase	A0A1W6JTA0	Pseudomonas_phage	1.7e-55	65.9
WP_011401460.1\|1740822_1741320_+	hypothetical protein	NA	NA	NA	NA
WP_011401461.1\|1741748_1742165_-	type II toxin-antitoxin system HicB family antitoxin	A0A0A8JBA5	Ralstonia_phage	1.2e-26	58.9
WP_009893919.1\|1742208_1742388_-	type II toxin-antitoxin system HicA family toxin	A0A0D4DC32	Acinetobacter_phage	1.2e-18	74.6
WP_011401462.1\|1742667_1743195_+	hypothetical protein	A4JWV5	Burkholderia_virus	6.2e-60	66.1
WP_011401463.1\|1743191_1743926_+	VRR-NUC domain-containing protein	A4JWV4	Burkholderia_virus	3.0e-52	50.9
WP_009893924.1\|1743935_1745051_+	DUF3396 domain-containing protein	E5E3X7	Burkholderia_phage	8.6e-176	80.4
WP_009893925.1\|1745121_1745697_-	recombinase family protein	A0A219Y9V9	Aeromonas_phage	2.3e-23	39.0
1754852:1754867	attR	NA	NA	NA	NA

DBSCAN-SWA_5

2298554 : 2376529

Ralstonia_phage(33.33%)

plate,holin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_009894648.1\|2298554_2300750_+\|holin	phospholipase C, phosphocholine-specific	NA	NA	NA	NA
WP_009894655.1\|2302464_2303481_-	AraC family transcriptional regulator	NA	NA	NA	NA
WP_009894657.1\|2303499_2303952_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_009894659.1\|2304487_2305333_+	ABC transporter permease	NA	NA	NA	NA
WP_009907076.1\|2305319_2306174_+	ABC transporter permease	NA	NA	NA	NA
WP_009894662.1\|2306170_2307202_+	extracellular solute-binding protein	NA	NA	NA	NA
WP_009894663.1\|2307750_2308821_-\|transposase	IS5 family transposase	A0A1V0E8E1	Vibrio_phage	3.6e-62	43.4
WP_009894664.1\|2308980_2309286_+	H-NS histone family protein	NA	NA	NA	NA
WP_011400785.1\|2309607_2312388_+	type VI secretion system tip protein VgrG	A0A2H4JCD4	uncultured_Caudovirales_phage	1.8e-89	34.2
WP_025404153.1\|2312401_2314642_+	DUF3274 domain-containing protein	A0A077K801	Ralstonia_phage	2.3e-23	28.7
WP_025404154.1\|2314660_2316319_+	DUF2875 family protein	NA	NA	NA	NA
WP_009894667.1\|2316328_2316592_+	PAAR domain-containing protein	NA	NA	NA	NA
WP_009894681.1\|2320637_2320901_+	PAAR domain-containing protein	NA	NA	NA	NA
WP_004523721.1\|2321315_2321735_-	YjbQ family protein	NA	NA	NA	NA
WP_009894689.1\|2321754_2322081_-	thioredoxin family protein	NA	NA	NA	NA
WP_009894691.1\|2322553_2323246_+	hypothetical protein	NA	NA	NA	NA
WP_009894695.1\|2324055_2324412_-	DUF4148 domain-containing protein	NA	NA	NA	NA
WP_009894697.1\|2324889_2326032_-	porin	NA	NA	NA	NA
WP_009907082.1\|2326663_2327587_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_009894700.1\|2328148_2328472_-	hypothetical protein	NA	NA	NA	NA
WP_127446348.1\|2328660_2328972_-	hypothetical protein	NA	NA	NA	NA
WP_009894702.1\|2329099_2329345_-	ribbon-helix-helix protein, CopG family	NA	NA	NA	NA
WP_009894703.1\|2329477_2330677_-	transcriptional regulator CynR	NA	NA	NA	NA
WP_009894704.1\|2330676_2332110_-	TolC family protein	NA	NA	NA	NA
WP_009894706.1\|2332103_2333003_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_009894707.1\|2333004_2333229_-	DUF1656 domain-containing protein	NA	NA	NA	NA
WP_038707668.1\|2333225_2335292_-	FUSC family protein	NA	NA	NA	NA
WP_025370055.1\|2336301_2337843_-	membrane protein	NA	NA	NA	NA
WP_154660021.1\|2338190_2338547_-	hypothetical protein	NA	NA	NA	NA
WP_011400797.1\|2339391_2341875_+	hypothetical protein	K4F7R4	Cronobacter_phage	9.0e-08	46.1
WP_025404156.1\|2341950_2343402_-	PhoPQ-regulated protein	NA	NA	NA	NA
WP_009907087.1\|2343652_2344051_-	hypothetical protein	NA	NA	NA	NA
WP_011400800.1\|2344832_2345387_+	type 1 fimbrial protein	NA	NA	NA	NA
WP_011400801.1\|2345468_2346194_+	fimbria/pilus periplasmic chaperone	NA	NA	NA	NA
WP_162465482.1\|2346242_2346401_-	hypothetical protein	NA	NA	NA	NA
WP_009894721.1\|2346353_2349050_+	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
WP_009894722.1\|2349069_2349615_+	type 1 fimbrial protein	NA	NA	NA	NA
WP_009907089.1\|2349645_2350335_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_009894727.1\|2350337_2352014_+	OmpA family protein	NA	NA	NA	NA
WP_009894728.1\|2352357_2352897_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_009894729.1\|2352930_2354430_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_009894730.1\|2354630_2355113_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_011400803.1\|2355240_2355783_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_009894732.1\|2355788_2357138_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_009894733.1\|2357134_2358436_+	type VI secretion system protein TssL	NA	NA	NA	NA
WP_009894736.1\|2358450_2362359_+	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_009894738.1\|2362528_2363098_+	hypothetical protein	NA	NA	NA	NA
WP_011400805.1\|2363198_2365817_+	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	1.8e-35	26.0
WP_004523693.1\|2365891_2366161_+	PAAR motif protein	NA	NA	NA	NA
WP_011400806.1\|2366173_2369626_+	RHS repeat protein	NA	NA	NA	NA
WP_038707671.1\|2369518_2370877_-	hypothetical protein	A0A292GJ55	Xanthomonas_phage	2.6e-110	49.7
WP_009894750.1\|2370909_2371938_-	fimbrial protein	NA	NA	NA	NA
WP_009894751.1\|2371993_2373064_-	type VI secretion protein ImpA	NA	NA	NA	NA
WP_009894753.1\|2373082_2374132_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_009894755.1\|2374128_2376009_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_009894757.1\|2376010_2376529_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP009601

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP009601_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009601_1

2201059-2201158

Orphan

Consensus_repeat	Method
GCGAAGTGCGTGCGCGGCGGCGCGCATG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP009601_1

>merge|NZ_CP009601|1|2201059-2201158|CRISPRCasFinder
GCGAAGTGCGTGCGCGGCGGCGCGCATGCGGCGGTCAATGCGGTGGCGAAGCGGGGGGGGCGATGCGGGGGAGCGAAGCGCGTGCGCGGCGGCGCGCATG

>NZ_CP009601|1|1|2201059-2201158|CRISPRCasFinder
GCGAAGTGCGTGCGCGGCGGCGCGCATG	CGGCGGTCAATGCGGTGGCGAAGCGGGGGGGGCGATGCGGGGGA
GCGAAGCGCGTGCGCGGCGGCGCGCATG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009601.1\|WP_011402249.1\|2192532_2194023_+\|NCS1-family-nucleobase:cation-symporter-1	unknown	unknown	gnl\|CDD\|271404
NZ_CP009601.1\|WP_011400919.1\|2206978_2208199_+\|ISL3-family-transposase	unknown	unknown	gnl\|CDD\|225995
NZ_CP009601.1\|WP_009890520.1\|2201457_2202870_+\|8-oxoguanine-deaminase	unknown	unknown	gnl\|CDD\|236184
NZ_CP009601.1\|WP_004521233.1\|2210188_2210869_-\|PspA/IM30-family-protein	unknown	unknown	gnl\|CDD\|224755
NZ_CP009601.1\|WP_009890543.1\|2208869_2210075_-\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP009601.1\|WP_011402254.1\|2206127_2206616_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009601.1\|WP_009890516.1\|2199219_2200422_-\|membrane-protein	unknown	unknown	gnl\|CDD\|368779
NZ_CP009601.1\|WP_009890505.1\|2194033_2194897_+\|aspartate/glutamate-racemase-family-protein	unknown	unknown	gnl\|CDD\|226611
NZ_CP009601.1\|WP_009890509.1\|2196756_2197770_+\|allantoicase	unknown	unknown	gnl\|CDD\|237319
NZ_CP009601.1\|WP_127446388.1\|2204044_2204620_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009601.1\|WP_009890510.1\|2197766_2198279_+\|ureidoglycolate-lyase	unknown	unknown	gnl\|CDD\|179606
NZ_CP009601.1\|WP_004192898.1\|2208254_2208686_-\|large-conductance-mechanosensitive-channel-protein-MscL	unknown	unknown	gnl\|CDD\|237569
NZ_CP009601.1\|WP_009890518.1\|2200471_2200825_-\|hydroxyisourate-hydrolase	unknown	unknown	gnl\|CDD\|225226
NZ_CP009601.1\|WP_009890507.1\|2195042_2195996_+\|allantoinase-PuuE	unknown	unknown	gnl\|CDD\|211797
NZ_CP009601.1\|WP_038707963.1\|2195995_2196517_+\|2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline-decarboxylase	unknown	unknown	gnl\|CDD\|225736
NZ_CP009601.1\|WP_009890512.1\|2198665_2199004_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009601.1\|WP_009890502.1\|2191681_2192377_+\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224715
NZ_CP009601.1\|WP_009890521.1\|2203059_2203989_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176152
NZ_CP009601.1\|WP_038707961.1\|2205038_2205977_+\|NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|224995
NZ_CP009601.1\|WP_009890522.1\|2204740_2204950_-\|dodecin-domain-containing-protein	unknown	unknown	gnl\|CDD\|377810

Protein	Function_ID	Function_description	E-value
NZ_CP009601.1\|WP_011402249.1\|2192532_2194023_+\|NCS1-family-nucleobase:cation-symporter-1	gnl\|CDD\|271404	cd11555, SLC-NCS1sbd_u1, uncharacterized nucleobase-cation-symport-1 (NCS1) transporter subfamily; solute-binding domain. NCS1s are essential components of salvage pathways for nucleobases and related metabolites; their known substrates include allantoin, uracil, thiamine, and nicotinamide riboside. NCS1s belong to a superfamily which also contains the solute carrier 5 family sodium/glucose transporters (SLC5s), and solute carrier 6 family neurotransmitter transporters (SLC6s).	0
NZ_CP009601.1\|WP_011400919.1\|2206978_2208199_+\|ISL3-family-transposase	gnl\|CDD\|225995	COG3464, COG3464, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	3.7698e-91
NZ_CP009601.1\|WP_009890520.1\|2201457_2202870_+\|8-oxoguanine-deaminase	gnl\|CDD\|236184	PRK08203, PRK08203, hydroxydechloroatrazine ethylaminohydrolase; Reviewed.	0
NZ_CP009601.1\|WP_004521233.1\|2210188_2210869_-\|PspA/IM30-family-protein	gnl\|CDD\|224755	COG1842, PspA, Phage shock protein A (IM30), suppresses sigma54-dependent transcription [Transcription / Signal transduction mechanisms].	5.00746e-22
NZ_CP009601.1\|WP_009890516.1\|2199219_2200422_-\|membrane-protein	gnl\|CDD\|368779	pfam06181, Urate_ox_N, Urate oxidase N-terminal. Cytochrome c urate oxidase (Uox) PuuD is involved in purine degradation. In contrast with soluble Uox it is a membrane protein with an 8-helix transmembrane N-terminal domain and a C-terminal cytochrome c.	0
NZ_CP009601.1\|WP_009890521.1\|2203059_2203989_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176152	cd08463, PBP2_DntR_like_4, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator similar to DntR, which is involved in the catabolism of dinitrotoluene; contains the type 2 periplasmic binding fold. This CD includes an uncharacterized LysR-type transcriptional regulator similar to DntR, NahR, and LinR, which are involved in the degradation of aromatic compounds. The transcription of the genes encoding enzymes involved in such degradation is regulated and expression of these enzymes is enhanced by inducers, which are either an intermediate in the metabolic pathway or compounds to be degraded. This substrate-binding domain shows significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	2.40332e-127
NZ_CP009601.1\|WP_009890509.1\|2196756_2197770_+\|allantoicase	gnl\|CDD\|237319	PRK13257, PRK13257, allantoicase; Provisional.	0
NZ_CP009601.1\|WP_009890505.1\|2194033_2194897_+\|aspartate/glutamate-racemase-family-protein	gnl\|CDD\|226611	COG4126, COG4126, Hydantoin racemase [Amino acid transport and metabolism].	4.21918e-80
NZ_CP009601.1\|WP_009890510.1\|2197766_2198279_+\|ureidoglycolate-lyase	gnl\|CDD\|179606	PRK03606, PRK03606, ureidoglycolate lyase.	4.0966e-102
NZ_CP009601.1\|WP_004192898.1\|2208254_2208686_-\|large-conductance-mechanosensitive-channel-protein-MscL	gnl\|CDD\|237569	PRK13952, mscL, large conductance mechanosensitive channel protein MscL.	2.50619e-80
NZ_CP009601.1\|WP_009890518.1\|2200471_2200825_-\|hydroxyisourate-hydrolase	gnl\|CDD\|225226	COG2351, COG2351, Transthyretin-like protein [General function prediction only].	3.76465e-65
NZ_CP009601.1\|WP_009890507.1\|2195042_2195996_+\|allantoinase-PuuE	gnl\|CDD\|211797	TIGR03212, uraD_N-term-dom, putative urate catabolism protein. This model represents a protein that is predominantly found just upstream of the UraD protein (OHCU decarboxylase) and in a number of instances as a N-terminal fusion with it. UraD itself catalyzes the last step in the catabolism of urate to allantoate. The function of this protein is presently unknown. It shows homology with the pfam01522 polysaccharide deacetylase domain family.	0
NZ_CP009601.1\|WP_038707963.1\|2195995_2196517_+\|2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline-decarboxylase	gnl\|CDD\|225736	COG3195, COG3195, Uncharacterized protein conserved in bacteria [Function unknown].	3.08249e-76
NZ_CP009601.1\|WP_009890543.1\|2208869_2210075_-\|tetratricopeptide-repeat-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	1.23436e-06
NZ_CP009601.1\|WP_009890502.1\|2191681_2192377_+\|GntR-family-transcriptional-regulator	gnl\|CDD\|224715	COG1802, GntR, Transcriptional regulators [Transcription].	1.67953e-47
NZ_CP009601.1\|WP_038707961.1\|2205038_2205977_+\|NAD(P)-dependent-oxidoreductase	gnl\|CDD\|224995	COG2084, MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism].	2.08475e-79
NZ_CP009601.1\|WP_009890522.1\|2204740_2204950_-\|dodecin-domain-containing-protein	gnl\|CDD\|377810	pfam07311, Dodecin, Dodecin. Dodecin is a flavin-binding protein,found in several bacteria and few archaea and represents a stand-alone version of the SHS2 domain. It most closely resembles the SHS2 domains of FtsA and Rpb7p, and represents a single domain small-molecule binding form.	1.01699e-32

>NZ_CP009601.1|WP_009890518.1|2200471_2200825_-|hydroxyisourate-hydrolase
MGKLTTHVLDTAHGRPGAAIKIELHAISGGGSRLLKTALTNDDGRCDAPLLEGDALAAGTYELVFHAGDYFAAQGVALPEPRFVDLVVLRFGVADPAAHYHVPLLVSPWSYSTYRGS
>NZ_CP009601.1|WP_009890516.1|2199219_2200422_-|membrane-protein
MEGFIIDWLNLAIRWLHVVAAIAWIGESFYFVALDNSLKPPKDAQLKSRGVFGELWHVHGGGFYNMQKYLVAPPEMPEDLHWSKWPSYTTWMSGFGLFFVLYLLAPNTYLIDRNVLDMGPVVAVASALGFLLAGWIVYDCACRMLGGRDKLLGVFVGLYVIAAAYIACHVFSGRAAYLIVGAMLATIMTANVFFVIIPGQRKMVDKLLKGETPDPIYGKRGKQRSVHNTYFTLPVVFAMLSNHYAMTYTNQYNWIVLVVIMLAGALIRQFFVMRHRGQQLWYLPLGGVALMLLALVTTMPKPIAPEAQAANAPNVPKLAIKDVAPILQQRCVACHSAKPTLVGSAPAGVMFDTSDEIARNAPRIYQQAVQLKAMPIGNLTHMTDDERTKIAAWFESGATK
>NZ_CP009601.1|WP_009890512.1|2198665_2199004_+|hypothetical-protein
MVIVGCIYLLVFAPLVYVLFLLHGMTIRLGGACLGIAAWVALSIAAIGIVRGWAWSRHWLIGGLIGLWIVSSNAGANGGDVAARGLDYICVALPLFTRRSTAFFRSRRDIEA
>NZ_CP009601.1|WP_009890510.1|2197766_2198279_+|ureidoglycolate-lyase
MNTLAIEPLTRAAFAPFGDVIETAGAKQIPINLGTTVRFHDLARIDVADEGGRPLVNLFRGQPRTLPFEVTMLERHPLGSQAFIPLTDRPYIVVVAPAGVLDPPKIRAFVTSGWQGVNYAKGVWHHPLIALGGVSDFIVVDRGGGGGNLDEQDLAGSLWLTEDALLAVSA
>NZ_CP009601.1|WP_009890509.1|2196756_2197770_+|allantoicase
MALPLSDPNAPEFTRRYVNLADPRLGAQALEASDDFFAPKERMLSPEPAVFIPGKYDDHGKWMDGWETRRKRTTGYDWCIVKLARPGVIKGFDIDTSHFTGNFPPAASIEAAHVPDGVPNEATKWVEVVPSTTLQGNSHHYVEARDANAYTHLRVNIYPDGGIARLRVYGQPQLDWAGASRSELFDLAAMDNGGYVVAVNNQHFGLASNMLLPGRGVNMGDGWETRRRREPGNDWAIVALAQPGVIRKIEVDTAHFKGNFPDRCSVQAAYVTGGTDSSLVTQAMFWPVLLGEQKLQMDKQHVFEAELAALGPVTHVRLNIIPDGGVSRLRVWGTLDK
>NZ_CP009601.1|WP_038707963.1|2195995_2196517_+|2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline-decarboxylase
MKAMRYTLEQLNAMSTEAFVAALSGIFEHSPWVAEAAAAARPFSSIDALHRTMRDAVDAAGDARQLALINAHPELAGKAAVRGELTAESTREQSGAGLDRCTQEEFDKLQRLNRAYREKFGFPFILAVRGYDRHGIIENFEARIDHTQDEELRASLGQIYRIARFRLDDLIDA
>NZ_CP009601.1|WP_009890507.1|2195042_2195996_+|allantoinase-PuuE
MAFDPNYPRDLVGYGRHPVQANWPGRARVAVQFVLNYEEGGENCVLHGDPASEQFLSEIVGAAAYPARHMSMESIYEYGSRAGVWRILREFDKRGLPLTVFGVGMAIERHPELARAFVEFGHEIACHGWRWIHYQDMTPEREAEHMKLGMEAIERVTGVRPLGWYTGRDSPNTHRLVAEYGGFLYDSDHYGDDLPFWMDVEVPGGARAPQLIVPYTLDANDMRFATPQGFNTADHFFHYLRDAFDVLYEEGDEAPKMMSIGMHCRLLGRPGRFRALQRFLDHIERHDRVWVARRVDIARHWREHHPYRPHARREGDA
>NZ_CP009601.1|WP_009890505.1|2194033_2194897_+|aspartate/glutamate-racemase-family-protein
MKIKLINPNTTQRMTDAMGRCAREVAAAGTAIVAVSPAMGPPSIEGHYDEALATPGLLAEVAAGERDGFDGYVIACFGDPGLYAARELARGPVIGIAEAAMHAASVLAPGFSVVTTLARTCGMAWHLAERYGMKRFCRNVRATDVAVLDLDRPGSAARRVIVDECRRALDEDGTDAIVLGCAGMAEFAHEIEAAIGAPVVEGVTAAVKWAEALIALKLATAKRGDFARPLAKRYDGEFARFSPDGAFALGAEAAAGAAVGPDAAAPGAAIQDARSPDAFAQPHIHSV
>NZ_CP009601.1|WP_011402249.1|2192532_2194023_+|NCS1-family-nucleobase:cation-symporter-1
MAQFSVAQQSASYRPNEGRPGDPDGGAAMPAGYSKRLYNEDLAPLANQNWGAYNIFAFWMSDVHSVGGYVFAGSLFALGLTSWQVLAALIVGISIVNVLCNLIAKPSQQLGVPYPVACRATFGVLGANVPAVIRGLIAIAWYGIQTYLASSALVIVVLKFFPQWMPYADVHRYGFLGLSALGWAGFMLLWVLQAFVFWNGMETIKKFIDFAGPAVYVVMFVLAGYMVWRAGWRNIGLDLGGVKYHGAEVLPVMVTAISLVVSYFSGPMLNFGDFSRYCRSYGSVKRGNFWGLPVNFLAFSLVTVITTAATLPVFGQLITDPVETVGRIDHPTAVILGALTFTIATIGINIVANFVSPAFDFSNVAPRLISWRAGGMLAAVASVFITPWNLFNNPAVIHYTLDVLGSFIGPLYGVLIVDFYLVKRGALRRDDLYTTSADGAYWYRDGVNRRAVAALLPAAAIAVACVMVPAPSGLANFSWFIGAALGGAFYRALAKA
>NZ_CP009601.1|WP_009890502.1|2191681_2192377_+|GntR-family-transcriptional-regulator
MTKKDSALTGASPESIAERIRTAILEHRLAPGTKLTEAQLCEVFGVKRGTIRQALALLATDRLVDLEPNRGAFVASPTLQDVHEVFEMRRIVELAVMERLATGPGAKRLKGVAATIDKERHAFERRDFPAWIRLSGEFHTELAALTGNTVLRDCLGGLVARSTLMSALYESHGRSPCSFDDHAQILAALEAGDAKRAAQLMAHHLQHVELRMLDRPAQGAVDLREVFGHSG
>NZ_CP009601.1|WP_009890520.1|2201457_2202870_+|8-oxoguanine-deaminase
MERYSSARAGAQSQSPNRPRTLVVKHADVLVTMDGARRELRDAGLYVEDNRIVAVGPSAELPAQADEVLDLRGHLVIPGLVNTHHHMYQSLTRAIPAAQNAELFGWLTNLYRIWAHLTPEMIEVSALTAMAELLLSGCTTSSDHLYIYPNGSRLDDSVAAAQRIGMRFHASRGSMSVGQRDGGLPPDSVVEREPDILRDTQRVIETYHDEGRYAMLRVVVAPCSPFSVSRGLMRDAAALAREHRVSLHTHLAENANDVAYSRETFGMTPAEYAEDLGWVGRDVWHAHCVQLDESGIALFARTGTGVAHCPCSNMRLASGIAPVARMRVAGVPVGLGVDGSASNDGAQMVAEVRQALLLQRVGFGPDAMTARDALEIATLGGARVLNRDDIGALAPGMAADFVAFDLRTPQFAGALHDPVAALVFCAPSQAAYSVVNGRVVVREGRLTAFEIEPLVERHNALAKALCEAAR
>NZ_CP009601.1|WP_009890521.1|2203059_2203989_-|LysR-family-transcriptional-regulator
MSQQREAIDTYLLRVLHTLLMERSVTRAAVKLNQSQPAISAALRRLRDITGDPLLVRGKSGMVPTEYGLRLLEPVQNALREIERIKFQQHNFDPATSIRCYRIGCPDYLNVLFVPTVVERFRQAAPNATLEFHSLGPAFDYELALEDGKLDIVVGNWPEPPEQLHLSNLFVDEIVCLMSNAHPFAKRGGLTLDQYLNAPHLAPTPYSVGQRGAIDVHLARERLKRHVVVTLPYFNLAPYVLVKSDLIFTTTRLFADHYAKFLPLSVVPAPLDFPPMQYYQLWHERCHYSDEVRWLRGLVAEATRTLIDA
>NZ_CP009601.1|WP_127446388.1|2204044_2204620_-|hypothetical-protein
MPLPRCGIRRNRHASRRTSRVSGERSSCPHDDLRRTARRRSFTAFRTAGPLAEIDAESATPSRATHNDNIAPTRIDTRDAPVRRADVRGRRVTGLASFARRRIDLFSSLVSPSSLAIHFLPPFLPPLFRTPFRIPFCAPFRHPFRDPHRRAFARLHRKLVTRRPRRSPVANRPRRARRLECAALDAPLCPY
>NZ_CP009601.1|WP_009890522.1|2204740_2204950_-|dodecin-domain-containing-protein
MNDHVYKLLELTGSSRQSSDDAIRNAISKAAKTMRNLHWFEVTDMRGHIEGDQVIHWQVTLKVGLRIED
>NZ_CP009601.1|WP_038707961.1|2205038_2205977_+|NAD(P)-dependent-oxidoreductase
MMGGNFNRYSNERKGEDVDVGFCGPGLMGAPMIRHLLSAGHRVHVWNRTRAKADALAAHGAQVVDTPAELAARAQTVMLCVLDAQAVGDVVFGASGVLAGDAAARCVTRIVDHSSIPPAATRAYAARAAALGASWVDAPVSGGVPGAEAGTLAVMAGGAQADVDAVRGLIGAYASRVTHLGDAGAGQTAKLCNQAIVTASVTAIAEAVGLAQASGIDAARLAEALAGGWADSVLLQTFVPRMTSTGHPPIGALKTFQKDVDAIADAARDAGAVMPVAATVQQVLRLGAAMGLAQADFAAFIDIVRPQAKRGE
>NZ_CP009601.1|WP_011402254.1|2206127_2206616_-|hypothetical-protein
MRMPHFLQLFLRRVFMSFPKKRRRAQPDGQESFLAVLRHAKPFAQLDTKIARARAQDEPVLYAHVLPGLDVLLCSVRGAQPPYPAIVELRKRCIESIANALEQPLDGLENGGYWYEANGFGFLVFASRARARILPEFGAGVKAGLRSGIGQPNAGDTTPRSL
>NZ_CP009601.1|WP_011400919.1|2206978_2208199_+|ISL3-family-transposase
MLDRKALQALGCWTGYRLERVEWPQGDSRTLSLYLKPVSRIMYCEQCGARCQQIHETTVRRVRDLPLFEYRVVLHVPRRRVWCERCGAARLEKLDWLGRYQRVTERFAQACEKLLQAASVQAVAAFYDLGWHTVKSIDKMRLRARVAEPDWSTIRYLAMDEFALHKGHRYATVVVDPIGRQVLWVGPGRSRETARAFFEQLPEGVAERIEAVAIDMTTAYELEIKEQCPQAEIVFDLYHVVAKYGREVIDRVRVDQANQLRHDKPARKVLKSSRWLLLRNRHNLKPEQAVHLKELLAANQSLLCVYVLRDELKRLWFYRKPACAEKAWGQWFEQAQQSGIAALQKFAQRLQGYWHGIVARCRHPLNTSVVEGINNTIKVIKRRAYGYRDEQYFFLKIRAAFPGIPR
>NZ_CP009601.1|WP_004192898.1|2208254_2208686_-|large-conductance-mechanosensitive-channel-protein-MscL
MSIIKEFKEFAVKGNVMDLAIGVIIGGAFSKIVDSVVKDLIMPVIGVLTGGLDFSNKFVLLGQIPASFKGNPESFKDLQAAGVATFGYGSFITVLINFIILAFIIFLMVKFINKLRKPEEAAPAATPEDVLLLREIRDSLKQR
>NZ_CP009601.1|WP_009890543.1|2208869_2210075_-|tetratricopeptide-repeat-protein
MKKLLAAVGLSLILVSAAANAAVPSLQQIQQSIAQGNWQRADAQLSQVIDAYPDNARARYLYGQVLDREGRPAEALAQIERAKSLDPQLRFTDPSRFAQTEARVRADARRATSAQSSRSATSGGMLVAPQTQGQAQSQFAAAPAAPAHRGPSAGMWIGFAVLIGAIVLVLRRTLRRARSADDQRAGDERRAQLKRATDVLNDVRPLKLDARLSTAPGAGALNGEIEALEAQARELVETLSNGQNPVPPYRLDELEKQFASLKARVEGRPDPGAASAAANAPGQTGSVFAQEADRLTGAQGQPPYSPYPPQPQQQPPVVIQQGGGFGGGMGGLLTGVLLGQAMSNGRDRVIEREVIVDDEARRRAGADPGIDFGQGDSWDSGGSDGGGIDLGSSGDDWSNNG
>NZ_CP009601.1|WP_004521233.1|2210188_2210869_-|PspA/IM30-family-protein
MSLFDSISRTIKGLLNDAADSVQDPSRDARQIVRELDDSIGRAENSLIEIEAQVATQRSKRDTADERAKKYEDGAKRALQSGDEALAREALAAQANAEAERDALARELDTLEPSVDKLKGQIADMRARRNDLNARSNILQAKQEIAQAKDVAATALGGIGGKNLSEDFQKLEDKVALSNARSDARLNSADTNSGRALDDKLAALNKGPSVEDRLEALKKQLNTPAQ

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

692702 : 699335

Ralstonia_phage(50.0%)

transposase,integrase

attL 692546:692596|attR 703083:703133

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
692546:692596	attL	NA	NA	NA	NA
WP_011402654.1\|692702_693020_-	helix-turn-helix transcriptional regulator	A0A088CD40	Shigella_phage	8.2e-15	56.6
WP_009910242.1\|693027_693360_-	type II toxin-antitoxin system RelE/ParE family toxin	A0A088CBP5	Shigella_phage	9.8e-19	51.9
WP_102860125.1\|693401_693944_-\|integrase	site-specific integrase	A0A0S2SYQ7	Pseudomonas_phage	1.9e-40	47.7
WP_099005207.1\|693993_694750_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_011402651.1\|695151_695931_-	hypothetical protein	A0A1W5LU59	Ralstonia_phage	2.4e-36	42.2
WP_043300356.1\|696389_696971_-	hypothetical protein	A0A0K2QQ53	Ralstonia_phage	4.5e-11	58.0
WP_011402649.1\|697047_698430_-	hypothetical protein	NA	NA	NA	NA
WP_025404147.1\|698426_699335_-	hypothetical protein	E5F074	Ralstonia_phage	5.2e-30	36.6
703083:703133	attR	NA	NA	NA	NA

DBSCAN-SWA_2

784777 : 846454

Stx2-converting_phage(30.0%)

transposase,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_009892020.1\|784777_785983_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_009906597.1\|786320_786929_-	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA
WP_009910123.1\|787079_787970_+	ATPase	NA	NA	NA	NA
WP_009910122.1\|788095_788917_+	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
WP_009910121.1\|789096_789801_-	aquaporin Z	NA	NA	NA	NA
WP_009906591.1\|790106_790403_+	H-NS histone family protein	NA	NA	NA	NA
WP_009910119.1\|790505_791570_-	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_080511675.1\|792092_792485_+	flagellar transcriptional regulator FlhD	NA	NA	NA	NA
WP_009906585.1\|792578_793130_+	flagellar transcriptional regulator FlhC	NA	NA	NA	NA
WP_009906583.1\|793331_794192_+	flagellar motor stator protein MotA	NA	NA	NA	NA
WP_009906582.1\|794208_795243_+	flagellar motor protein MotB	NA	NA	NA	NA
WP_009906581.1\|795273_795654_+	response regulator	NA	NA	NA	NA
WP_011402607.1\|795685_797935_+	chemotaxis protein CheA	NA	NA	NA	NA
WP_009906577.1\|797965_798493_+	chemotaxis protein CheW	NA	NA	NA	NA
WP_011402606.1\|798533_800534_+	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	1.3e-12	41.5
WP_009906572.1\|800537_801485_+	chemotaxis protein CheR	NA	NA	NA	NA
WP_011402604.1\|801481_802186_+	chemoreceptor glutamine deamidase CheD	NA	NA	NA	NA
WP_009906568.1\|802182_803286_+	chemotaxis response regulator protein-glutamate methylesterase	NA	NA	NA	NA
WP_004185006.1\|803371_803767_+	chemotaxis protein CheY	Q56AR1	Bacillus_thuringiensis_phage	2.7e-07	32.8
WP_011402603.1\|803768_804497_+	protein phosphatase CheZ	NA	NA	NA	NA
WP_009910093.1\|804697_805201_+	DUF2844 domain-containing protein	NA	NA	NA	NA
WP_011402602.1\|805223_806537_+	DUF3443 domain-containing protein	NA	NA	NA	NA
WP_009910090.1\|806716_807217_+	VOC family protein	NA	NA	NA	NA
WP_011402601.1\|807317_808784_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_009910087.1\|809164_810370_+	flagellar type III secretion system protein FlhB	NA	NA	NA	NA
WP_009906552.1\|810366_812469_+	flagellar biosynthesis protein FlhA	NA	NA	NA	NA
WP_009910086.1\|812465_814199_+	flagellar biosynthesis protein FlhF	NA	NA	NA	NA
WP_009910085.1\|814191_815004_+	flagellar biosynthesis protein FlhG	NA	NA	NA	NA
WP_009906542.1\|815028_815760_+	RNA polymerase sigma factor FliA	NA	NA	NA	NA
WP_009906539.1\|816112_817534_+	adenosylhomocysteinase	S4VPF6	Pandoravirus	9.9e-44	29.9
WP_009906537.1\|817697_818051_+\|holin	phage holin family protein	NA	NA	NA	NA
WP_009906536.1\|818068_818899_+	methylenetetrahydrofolate reductase [NAD(P)H]	NA	NA	NA	NA
WP_011400919.1\|818980_820201_-\|transposase	ISL3 family transposase	A9YX10	Burkholderia_phage	3.0e-238	99.0
WP_009910081.1\|820387_821878_-	6-aminohexanoate-cyclic-dimer hydrolase	NA	NA	NA	NA
WP_009906534.1\|821966_822659_-	carboxymethylenebutenolidase	NA	NA	NA	NA
WP_009906533.1\|822957_824058_+	nitronate monooxygenase	NA	NA	NA	NA
WP_009906532.1\|824512_825655_+	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_025369719.1\|825813_827022_-	MFS transporter	NA	NA	NA	NA
WP_025369720.1\|827321_828011_+	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA
WP_004195767.1\|828395_828689_+	H-NS histone family protein	NA	NA	NA	NA
WP_009906524.1\|828928_830119_+	cation transporter	NA	NA	NA	NA
WP_004195771.1\|830284_830743_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
WP_009906521.1\|830833_831490_-	exonuclease	A0A2L0UZL4	Agrobacterium_phage	1.5e-31	37.1
WP_009910074.1\|831486_832131_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_009906517.1\|832731_833367_+	septal ring lytic transglycosylase RlpA family protein	F5B3X9	Synechococcus_phage	1.9e-23	65.5
WP_009906515.1\|833461_834349_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	NA	NA	NA
WP_009910065.1\|834395_834830_+	YraN family protein	NA	NA	NA	NA
WP_009910064.1\|834952_835531_+	SIS domain-containing protein	NA	NA	NA	NA
WP_009906511.1\|835549_836350_+	BON domain-containing protein	NA	NA	NA	NA
WP_025369721.1\|836346_836709_+	c-type cytochrome	NA	NA	NA	NA
WP_127446418.1\|836855_837212_-	hypothetical protein	NA	NA	NA	NA
WP_009888727.1\|840595_841003_+\|transposase	transposase	A0A0P0ZBP6	Stx2-converting_phage	3.1e-14	38.2
WP_009889515.1\|840999_841347_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	2.1e-40	72.0
WP_009889500.1\|841376_842948_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	6.7e-150	53.8
WP_158347316.1\|842975_844754_+	hypothetical protein	NA	NA	NA	NA
WP_102860126.1\|845254_846454_-\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	9.2e-43	42.7

DBSCAN-SWA_3

968109 : 1019049

uncultured_Mediterranean_phage(33.33%)

transposase,protease,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_009888488.1\|968109_968823_+\|transposase	transposase	NA	NA	NA	NA
WP_009888489.1\|969113_973817_+	glutamate synthase subunit alpha	NA	NA	NA	NA
WP_009888490.1\|973911_975378_+	glutamate synthase subunit beta	NA	NA	NA	NA
WP_009888491.1\|975657_977169_+	alanine:cation symporter family protein	NA	NA	NA	NA
WP_025404123.1\|977165_977726_+	RNA 2',3'-cyclic phosphodiesterase	NA	NA	NA	NA
WP_009888495.1\|977882_978077_-	hypothetical protein	NA	NA	NA	NA
WP_009888497.1\|978073_979840_-	ABC transporter ATP-binding protein/permease	NA	NA	NA	NA
WP_009888499.1\|980469_981603_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_009888501.1\|981657_981855_+	sulfur carrier protein ThiS	NA	NA	NA	NA
WP_009888503.1\|981907_982723_+	thiazole synthase	NA	NA	NA	NA
WP_009888505.1\|982719_983814_+	thiamine phosphate synthase	NA	NA	NA	NA
WP_009888506.1\|983913_984732_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.5e-20	29.4
WP_004199929.1\|984728_985496_+	lipid asymmetry maintenance ABC transporter permease subunit MlaE	NA	NA	NA	NA
WP_009888512.1\|985508_986039_+	outer membrane lipid asymmetry maintenance protein MlaD	NA	NA	NA	NA
WP_009888514.1\|986086_987022_+	VacJ family lipoprotein	NA	NA	NA	NA
WP_009888516.1\|987136_987769_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_009888518.1\|987765_988035_+	STAS domain-containing protein	NA	NA	NA	NA
WP_009888520.1\|988349_989276_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	2.0e-21	29.7
WP_009888522.1\|989272_990028_+	ABC transporter permease	NA	NA	NA	NA
WP_004199917.1\|990123_990363_+	BolA family transcriptional regulator	NA	NA	NA	NA
WP_009888526.1\|990376_991726_+	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA
WP_009888527.1\|991722_992379_+	ATP phosphoribosyltransferase	NA	NA	NA	NA
WP_009888528.1\|992418_993756_+	histidinol dehydrogenase	NA	NA	NA	NA
WP_009909979.1\|993910_994981_+	histidinol-phosphate transaminase	A0A0H3TLT9	Faustovirus	1.9e-15	26.7
WP_009888530.1\|995043_995631_+	imidazoleglycerol-phosphate dehydratase HisB	NA	NA	NA	NA
WP_004199909.1\|995686_996307_+	YchE family NAAT transporter	NA	NA	NA	NA
WP_009888535.1\|996303_996945_+	imidazole glycerol phosphate synthase subunit HisH	NA	NA	NA	NA
WP_009888536.1\|997112_997868_+	1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase	NA	NA	NA	NA
WP_009888537.1\|997950_998724_+	imidazole glycerol phosphate synthase subunit HisF	NA	NA	NA	NA
WP_009888538.1\|998723_999137_+	phosphoribosyl-AMP cyclohydrolase	NA	NA	NA	NA
WP_009888539.1\|999133_999502_+	phosphoribosyl-ATP diphosphatase	NA	NA	NA	NA
WP_009888541.1\|999554_999944_+	membrane protein	NA	NA	NA	NA
WP_009888543.1\|999972_1000338_+	histidine triad nucleotide-binding protein	NA	NA	NA	NA
WP_009888545.1\|1000426_1000660_+	Sec-independent protein translocase subunit TatA	NA	NA	NA	NA
WP_009909978.1\|1000686_1001214_+	Sec-independent protein translocase subunit TatB	NA	NA	NA	NA
WP_009888550.1\|1001252_1002035_+	twin-arginine translocase subunit TatC	A0A1B1IVR7	uncultured_Mediterranean_phage	1.5e-25	29.3
WP_009888560.1\|1002429_1003635_-	Do family serine endopeptidase	A0A1B1IRD3	uncultured_Mediterranean_phage	6.5e-12	31.9
WP_009888562.1\|1003656_1004403_+	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA
WP_009888563.1\|1004623_1005244_+	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA
WP_009888565.1\|1005244_1006627_+	cytochrome bc complex cytochrome b subunit	NA	NA	NA	NA
WP_009888567.1\|1006649_1007408_+	cytochrome c1	NA	NA	NA	NA
WP_004185176.1\|1007500_1008112_+	stringent starvation protein A	NA	NA	NA	NA
WP_011402553.1\|1008181_1008694_+\|protease	ClpXP protease specificity-enhancing factor	A0A1S5R3H3	Pseudomonas_phage	1.1e-21	52.5
WP_158338514.1\|1009275_1009404_-\|transposase	transposase	NA	NA	NA	NA
WP_009888580.1\|1010037_1010823_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_009888581.1\|1010819_1012166_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_025404121.1\|1012274_1012889_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_011402551.1\|1013262_1013952_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_009888592.1\|1013988_1014507_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_009888594.1\|1014523_1016014_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_009906860.1\|1016086_1016590_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_009888597.1\|1016647_1017130_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_009888599.1\|1017210_1019049_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA

DBSCAN-SWA_4

1322135 : 1331366

Hokovirus(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_009889255.1\|1322135_1324088_+	molecular chaperone DnaK	A0A1V0SH73	Hokovirus	1.2e-148	49.5
WP_009889258.1\|1324351_1325482_+	molecular chaperone DnaJ	E3T4P7	Cafeteria_roenbergensis_virus	1.8e-24	38.0
WP_009889260.1\|1325513_1327523_+	bifunctional anthranilate synthase component I family protein/class IV aminotransferase	S4VT78	Pandoravirus	1.7e-52	35.2
WP_025369782.1\|1327698_1328514_-	3-methyl-2-oxobutanoate hydroxymethyltransferase	A0A0N7HVJ8	Ostreococcus_lucimarinus_virus	4.4e-36	32.9
WP_009889263.1\|1328578_1329262_-	deoxynucleoside kinase	A0A249XZR7	Enterococcus_phage	3.3e-05	26.0
WP_009889265.1\|1329258_1329786_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA
WP_009889266.1\|1329821_1331366_-	polynucleotide adenylyltransferase PcnB	H7BUW3	unidentified_phage	3.3e-24	31.2

DBSCAN-SWA_5

1480945 : 1502395

Stx2-converting_phage(92.31%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_009889500.1\|1480945_1482517_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	6.7e-150	53.8
WP_009889515.1\|1482546_1482894_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	2.1e-40	72.0
WP_009889500.1\|1482997_1484569_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	6.7e-150	53.8
WP_009889515.1\|1484598_1484946_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	2.1e-40	72.0
WP_009888727.1\|1484942_1485350_-\|transposase	transposase	A0A0P0ZBP6	Stx2-converting_phage	3.1e-14	38.2
WP_009889514.1\|1485532_1486132_-	HAD family hydrolase	NA	NA	NA	NA
WP_011402067.1\|1486156_1488919_-	ATP-dependent helicase	A0A068EQC7	Bacillus_phage	2.1e-34	22.4
WP_127463403.1\|1489045_1489936_-	hypothetical protein	NA	NA	NA	NA
WP_127446405.1\|1490367_1490796_-	hypothetical protein	NA	NA	NA	NA
WP_127446406.1\|1490839_1491316_-	hypothetical protein	NA	NA	NA	NA
WP_009889505.1\|1491312_1491939_-	hypothetical protein	NA	NA	NA	NA
WP_009889504.1\|1491990_1492905_+	WYL domain-containing protein	NA	NA	NA	NA
WP_080511473.1\|1493040_1493982_+	toll/interleukin-1 receptor domain-containing protein	NA	NA	NA	NA
WP_127446407.1\|1494452_1494884_+	hypothetical protein	NA	NA	NA	NA
WP_009888727.1\|1494933_1495341_+\|transposase	transposase	A0A0P0ZBP6	Stx2-converting_phage	3.1e-14	38.2
WP_009889515.1\|1495337_1495685_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	2.1e-40	72.0
WP_009889500.1\|1495714_1497286_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	6.7e-150	53.8
WP_009889515.1\|1497389_1497737_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	2.1e-40	72.0
WP_009889500.1\|1497766_1499338_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	6.7e-150	53.8
WP_080511475.1\|1499605_1500400_-	TniQ family protein	NA	NA	NA	NA
WP_009889500.1\|1500446_1502018_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	6.7e-150	53.8
WP_009889515.1\|1502047_1502395_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	2.1e-40	72.0

DBSCAN-SWA_6

1705242 : 1713959

Bacillus_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_009889852.1\|1705242_1706643_+	UDP-glucose/GDP-mannose dehydrogenase family protein	A0A127AXI2	Bacillus_phage	1.1e-79	38.7
WP_009889854.1\|1706611_1707598_+	D-glycero-beta-D-manno-heptose-7-phosphate kinase	A0A2H4N7X4	Lake_Baikal_phage	6.7e-15	27.9
WP_009889856.1\|1707655_1708648_+	ADP-glyceromanno-heptose 6-epimerase	R9S880	Prochlorococcus_phage	9.1e-28	30.9
WP_009889858.1\|1708719_1709037_+	competence protein ComE	NA	NA	NA	NA
WP_009904404.1\|1709371_1710274_+	cysteine synthase CysM	A0A1X9I5F1	Streptococcus_phage	4.3e-53	39.9
WP_009889862.1\|1710368_1711610_-	lytic murein transglycosylase B	NA	NA	NA	NA
WP_009889864.1\|1711788_1712712_+	histone deacetylase family protein	A0A2K9KZC4	Tupanvirus	3.2e-43	36.2
WP_009889867.1\|1713047_1713959_-	alpha/beta hydrolase	A7K906	Acanthocystis_turfacea_chlorella_virus	1.6e-10	25.7

DBSCAN-SWA_7

2013965 : 2029767

Burkholderia_virus(33.33%)

transposase,tail,integrase

attL 2007092:2007107|attR 2019639:2019654

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2007092:2007107	attL	NA	NA	NA	NA
WP_009890225.1\|2013965_2016647_-	DNA mismatch repair protein MutS	A0A1V0SDQ0	Indivirus	2.2e-28	24.0
WP_011402202.1\|2016806_2018108_+\|integrase	integrase family protein	C7BGE7	Burkholderia_phage	3.0e-148	58.9
WP_009890227.1\|2018058_2018301_-	AlpA family phage regulatory protein	C7BGF0	Burkholderia_phage	9.3e-19	59.2
WP_009890228.1\|2018309_2018783_-	hypothetical protein	B5TA88	Burkholderia_phage	3.0e-05	71.4
WP_004531944.1\|2018791_2019121_-	hypothetical protein	NA	NA	NA	NA
WP_080511629.1\|2020157_2020295_+\|tail	phage tail protein	A0A2H4J9Z9	uncultured_Caudovirales_phage	7.8e-07	56.8
2019639:2019654	attR	NA	NA	NA	NA
WP_009890233.1\|2020304_2021357_+	phage late control protein	A0A2H4JBF6	uncultured_Caudovirales_phage	9.2e-79	44.8
WP_004533694.1\|2021432_2021627_+	hypothetical protein	NA	NA	NA	NA
WP_004539628.1\|2021619_2022117_+	lysozyme	A4JX20	Burkholderia_virus	2.2e-67	78.2
WP_004533951.1\|2022116_2022662_+	lysozyme	Q8W6S5	Burkholderia_virus	1.7e-81	94.5
WP_009890252.1\|2022804_2023593_+	DNA adenine methylase	Q8W6S4	Burkholderia_virus	1.0e-151	97.3
WP_009890254.1\|2023633_2024344_-	hypothetical protein	A4PE26	Ralstonia_virus	4.1e-38	41.5
WP_162486716.1\|2024355_2025024_-	hypothetical protein	NA	NA	NA	NA
WP_011402209.1\|2025308_2025818_-	DUF4123 domain-containing protein	A4PE24	Ralstonia_virus	3.0e-19	40.1
WP_009910666.1\|2025814_2026240_-	PAAR domain-containing protein	A4JWV5	Burkholderia_virus	8.4e-15	47.0
WP_009890263.1\|2026301_2026583_-	hypothetical protein	NA	NA	NA	NA
WP_009890265.1\|2026582_2027047_-	hypothetical protein	C7BGE3	Burkholderia_phage	9.7e-49	60.4
WP_009890267.1\|2027127_2027697_+	DUF159 family protein	A4JX27	Burkholderia_virus	4.5e-88	81.8
WP_127446392.1\|2027994_2028465_+	hypothetical protein	NA	NA	NA	NA
WP_085952903.1\|2028532_2029767_-\|transposase	IS3-like element ISButh1 family transposase	A0A1B0Z042	Pseudomonas_phage	4.1e-102	65.2

DBSCAN-SWA_8

2853948 : 2927039

Stx2-converting_phage(23.08%)

transposase,coat,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_009891643.1\|2853948_2856816_+\|tRNA	valine--tRNA ligase	A0A1V0SK04	Klosneuvirus	6.7e-148	39.3
WP_009891646.1\|2856902_2857787_+	UTP--glucose-1-phosphate uridylyltransferase GalU	A0A127AW70	Bacillus_phage	1.1e-69	48.3
WP_009891648.1\|2857863_2858469_-	DUF4136 domain-containing protein	NA	NA	NA	NA
WP_009891650.1\|2858558_2860952_-	CHASE2 domain-containing protein	NA	NA	NA	NA
WP_009891653.1\|2860962_2862327_-	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA
WP_004193573.1\|2862323_2863028_-	response regulator transcription factor	NA	NA	NA	NA
WP_009891660.1\|2863318_2863705_-	hypothetical protein	NA	NA	NA	NA
WP_004193727.1\|2863963_2864194_-	sulfurtransferase TusA family protein	NA	NA	NA	NA
WP_009891663.1\|2864353_2865391_-	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_009891664.1\|2865403_2866423_-	inositol 2-dehydrogenase	NA	NA	NA	NA
WP_009891665.1\|2866415_2867297_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
WP_009891666.1\|2867542_2868592_+	sugar ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_009891668.1\|2868692_2869838_+	ABC transporter permease	NA	NA	NA	NA
WP_009891669.1\|2869850_2870651_+	sugar ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.6e-14	29.4
WP_011402440.1\|2870664_2872665_+	5-dehydro-2-deoxygluconokinase	NA	NA	NA	NA
WP_011402441.1\|2872675_2874679_+	3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing)	NA	NA	NA	NA
WP_009891675.1\|2874675_2875596_+	myo-inosose-2 dehydratase	NA	NA	NA	NA
WP_009891677.1\|2875595_2876399_+	5-deoxy-glucuronate isomerase	NA	NA	NA	NA
WP_009891678.1\|2876463_2877168_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	8.7e-09	31.8
WP_009891679.1\|2877164_2879390_-	branched-chain amino acid ABC transporter ATP-binding protein/permease	A0A2R8FFL6	Cedratvirus	1.6e-08	27.9
WP_009891680.1\|2879382_2880318_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
WP_009909721.1\|2880322_2880772_-	acyl-CoA thioesterase	NA	NA	NA	NA
WP_009891683.1\|2880995_2882144_-	iron-containing alcohol dehydrogenase	NA	NA	NA	NA
WP_009891685.1\|2882333_2882669_+	YbjQ family protein	NA	NA	NA	NA
WP_009891687.1\|2882761_2883316_-	NUDIX domain-containing protein	NA	NA	NA	NA
WP_011402443.1\|2883778_2885287_-	PDZ domain-containing protein	A0A1B1IT49	uncultured_Mediterranean_phage	1.5e-10	25.2
WP_025988538.1\|2885838_2887332_-	YbfB/YjiJ family MFS transporter	NA	NA	NA	NA
WP_009891696.1\|2887476_2888442_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_009891699.1\|2888880_2891505_-\|tRNA	alanine--tRNA ligase	A0A1V0SK38	Klosneuvirus	7.1e-80	39.2
WP_009891700.1\|2891946_2893167_+	CoA transferase	NA	NA	NA	NA
WP_038709125.1\|2894594_2894804_-	ornithine acetyltransferase	NA	NA	NA	NA
WP_009891706.1\|2895084_2896794_+\|tRNA	glutamine--tRNA ligase/YqeY domain fusion protein	A0A222YZ70	Escherichia_phage	2.8e-186	56.9
WP_009891707.1\|2897088_2897565_-	NUDIX hydrolase	A0A2I6PFL2	Proteus_phage	2.0e-20	41.3
WP_009891709.1\|2897583_2897970_-	hypothetical protein	NA	NA	NA	NA
WP_009891711.1\|2898256_2900356_-	glycoside hydrolase family 3 protein	NA	NA	NA	NA
WP_009905872.1\|2900281_2900461_+	hypothetical protein	NA	NA	NA	NA
WP_009891712.1\|2900457_2901318_+	M15 family metallopeptidase	NA	NA	NA	NA
WP_009891714.1\|2901363_2902755_-	cytochrome-c peroxidase	NA	NA	NA	NA
WP_009891716.1\|2902988_2904572_+	acid phosphatase	NA	NA	NA	NA
WP_009891718.1\|2904796_2905990_+	trans-2-enoyl-CoA reductase family protein	NA	NA	NA	NA
WP_009891719.1\|2906007_2906850_-	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_154660009.1\|2907094_2907337_+	hypothetical protein	NA	NA	NA	NA
WP_009891722.1\|2907547_2908180_-	response regulator transcription factor	NA	NA	NA	NA
WP_025369426.1\|2908180_2910253_-	response regulator	A0A1V0SGR3	Hokovirus	5.0e-12	25.9
WP_009891727.1\|2910663_2911629_-\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_009891728.1\|2911644_2914056_-	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
WP_009891730.1\|2914100_2914940_-	molecular chaperone	NA	NA	NA	NA
WP_009891731.1\|2914957_2915482_-\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_009891732.1\|2915564_2916125_-\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_025369429.1\|2916177_2916723_-\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_009891734.1\|2917525_2918419_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_011402450.1\|2918834_2920124_+	MFS transporter	NA	NA	NA	NA
WP_009891736.1\|2920168_2921095_+	amidohydrolase family protein	NA	NA	NA	NA
WP_009891740.1\|2921580_2921862_+	H-NS histone family protein	NA	NA	NA	NA
WP_009891742.1\|2922061_2922325_-	hypothetical protein	NA	NA	NA	NA
WP_009891744.1\|2923074_2924388_-	divalent metal cation transporter	NA	NA	NA	NA
WP_009889500.1\|2924686_2926258_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	6.7e-150	53.8
WP_009889515.1\|2926287_2926635_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	2.1e-40	72.0
WP_009888727.1\|2926631_2927039_-\|transposase	transposase	A0A0P0ZBP6	Stx2-converting_phage	3.1e-14	38.2

DBSCAN-SWA_9

2956822 : 3014271

Stx2-converting_phage(27.27%)

transposase,integrase,plate

attL 2958251:2958266|attR 2978992:2979007

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_009891794.1\|2956822_2958673_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
2958251:2958266	attL	NA	NA	NA	NA
WP_009910381.1\|2960165_2960384_+	hypothetical protein	NA	NA	NA	NA
WP_009891798.1\|2961145_2962624_+	PHB depolymerase family esterase	NA	NA	NA	NA
WP_009891799.1\|2962927_2963263_-	H-NS histone family protein	NA	NA	NA	NA
WP_009891801.1\|2963579_2964866_-	MFS transporter	Q6JIH2	Burkholderia_virus	2.3e-172	71.8
WP_011402462.1\|2964998_2965904_-	LysR family transcriptional regulator	Q6JIH3	Burkholderia_virus	1.7e-129	75.1
WP_009891805.1\|2966947_2968387_+\|integrase	integrase family protein	NA	NA	NA	NA
WP_009891806.1\|2968661_2969132_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_009891810.1\|2969302_2971222_-	ATP-dependent helicase	NA	NA	NA	NA
WP_009891812.1\|2971218_2973573_-	AAA family ATPase	NA	NA	NA	NA
WP_011402463.1\|2973997_2975734_-	ShlB/FhaC/HecB family hemolysin secretion/activation protein	NA	NA	NA	NA
WP_080511662.1\|2975758_2975980_-	CDI system lipoprotein BcpO	NA	NA	NA	NA
WP_011402464.1\|2976010_2976823_-	contact-dependent inhibition immunity protein BcpI	NA	NA	NA	NA
WP_011402465.1\|2976819_2986263_-	contact-dependent inhibition toxin BcpA	A0A0R6PJK4	Moraxella_phage	9.9e-31	31.4
2978992:2979007	attR	NA	NA	NA	NA
WP_059844718.1\|2987190_2987418_+	hypothetical protein	NA	NA	NA	NA
WP_009891820.1\|2987521_2988490_+	DUF932 domain-containing protein	A0A0H4INH5	Stenotrophomonas_phage	3.1e-57	42.0
WP_009891822.1\|2988486_2988687_+	hypothetical protein	NA	NA	NA	NA
WP_011402467.1\|2988756_2989752_+	endonuclease	A6XMH8	Bacillus_virus	1.3e-55	39.5
WP_009891828.1\|2989763_2989979_+	hypothetical protein	NA	NA	NA	NA
WP_009891830.1\|2990047_2990962_+	hypothetical protein	NA	NA	NA	NA
WP_009891833.1\|2990958_2992044_+	hypothetical protein	NA	NA	NA	NA
WP_009891835.1\|2992099_2992909_+	DUF4942 domain-containing protein	NA	NA	NA	NA
WP_009891839.1\|2993010_2993310_+	hypothetical protein	NA	NA	NA	NA
WP_009891843.1\|2993313_2993571_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_009891847.1\|2994125_2994836_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_011402469.1\|2994914_2995262_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_009891850.1\|2995391_2996228_+	hypothetical protein	NA	NA	NA	NA
WP_009889500.1\|2996267_2997839_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	6.7e-150	53.8
WP_011402470.1\|2997868_2998216_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	3.3e-41	72.9
WP_009888727.1\|2998212_2998620_-\|transposase	transposase	A0A0P0ZBP6	Stx2-converting_phage	3.1e-14	38.2
WP_011402471.1\|2998979_2999615_-	GIY-YIG nuclease family protein	NA	NA	NA	NA
WP_009891853.1\|2999747_3001730_-	DNA mismatch repair protein	NA	NA	NA	NA
WP_009891856.1\|3001885_3005041_-	type I restriction endonuclease subunit R	A0A220A398	Liberibacter_phage	1.1e-71	30.8
WP_011402472.1\|3005040_3005787_-	hypothetical protein	NA	NA	NA	NA
WP_025404080.1\|3005783_3007076_-	restriction endonuclease subunit S	NA	NA	NA	NA
WP_009891859.1\|3007065_3008622_-	SAM-dependent DNA methyltransferase	NA	NA	NA	NA
WP_085952878.1\|3009449_3010660_-\|transposase	IS3-like element ISButh2 family transposase	A0A1B0Z042	Pseudomonas_phage	7.0e-99	63.1
WP_102815742.1\|3010972_3012556_+	recombinase family protein	NA	NA	NA	NA
WP_009891862.1\|3013011_3014271_-\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	1.5e-43	44.4

DBSCAN-SWA_10

3376347 : 3384127

uncultured_Caudovirales_phage(28.57%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_009891862.1\|3376347_3377607_-\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	1.5e-43	44.4
WP_080511450.1\|3377572_3377818_-	hypothetical protein	Q6J1Q4	Burkholderia_virus	1.7e-07	57.7
WP_009892398.1\|3377814_3378234_-	glycoside hydrolase family protein	A0A1Q1PW74	Pseudoalteromonas_phage	1.4e-22	45.5
WP_009892399.1\|3378240_3378513_-	hypothetical protein	NA	NA	NA	NA
WP_119027193.1\|3378799_3379555_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_009892403.1\|3379568_3380207_-	hypothetical protein	NA	NA	NA	NA
WP_009892404.1\|3380238_3381708_-	hypothetical protein	A0A2H4J6H2	uncultured_Caudovirales_phage	8.2e-126	46.7
WP_009892405.1\|3381631_3382198_-	hypothetical protein	A0A1B1IRK9	uncultured_Mediterranean_phage	3.8e-31	47.0
WP_009892406.1\|3382201_3382804_-	hypothetical protein	A0A2H4JID6	uncultured_Caudovirales_phage	3.1e-47	50.0
WP_011400919.1\|3382906_3384127_+\|transposase	ISL3 family transposase	A9YX10	Burkholderia_phage	3.0e-238	99.0

DBSCAN-SWA_11

3545495 : 3556377

Agrobacterium_phage(16.67%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_009892610.1\|3545495_3547796_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	5.1e-167	41.9
WP_009892611.1\|3547792_3548107_-\|protease	ATP-dependent Clp protease adapter ClpS	A0A218MMY6	uncultured_virus	2.6e-13	44.6
WP_004196460.1\|3548637_3548841_+	cold-shock protein	A0A2H4N7Y6	Lake_Baikal_phage	6.8e-23	81.8
WP_009892613.1\|3548952_3550548_-	multicopper oxidase family protein	NA	NA	NA	NA
WP_009892614.1\|3550709_3551969_-	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	6.8e-12	63.0
WP_009892615.1\|3552233_3552812_+	pseudouridine synthase	NA	NA	NA	NA
WP_080511442.1\|3553072_3553288_+	hypothetical protein	NA	NA	NA	NA
WP_011401863.1\|3553483_3553999_+	DUF192 domain-containing protein	A0A1B1IUW8	uncultured_Mediterranean_phage	1.5e-13	41.2
WP_009892620.1\|3554262_3556377_+	elongation factor G	E4ZFJ7	Streptococcus_phage	1.2e-56	26.8

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP009602

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP009601

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection