CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number
NZ_CP009630	Burkholderia vietnamiensis LMG 10929 chromosome II, complete sequence	0 crisprs	csa3,DinG,cas3,DEDDh	0	0	1
NZ_CP009632	Burkholderia vietnamiensis LMG 10929 chromosome III, complete sequence	3 crisprs	csa3	6	6	2
NZ_CP009629	Burkholderia vietnamiensis LMG 10929 plasmid pBVB_1, complete sequence	0 crisprs	NA	0	0	0
NZ_CP009631	Burkholderia vietnamiensis LMG 10929 chromosome I, complete sequence	3 crisprs	WYL,DinG,PD-DExK,DEDDh,csa3	0	2	230

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

784493 : 834790

Paenibacillus_phage(20.0%)

plate,integrase,tRNA,transposase

attL 777120:777139|attR 787007:787026

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
777120:777139	attL	NA	NA	NA	NA
WP_081333197.1\|784493_784688_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_045577887.1\|785219_786410_+	EAL domain-containing protein	NA	NA	NA	NA
WP_085954470.1\|786641_787459_-\|transposase	IS5-like element ISBcen20 family transposase	A0A0N9SHJ4	Paenibacillus_phage	1.1e-07	35.0
787007:787026	attR	NA	NA	NA	NA
WP_080938601.1\|787555_789235_+	MCP four helix bundle domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	4.5e-19	29.6
WP_045577889.1\|789887_790763_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_045577890.1\|790774_791731_-\|tRNA	D-aminoacyl-tRNA deacylase	NA	NA	NA	NA
WP_011882443.1\|791762_792365_-	LysE family translocator	NA	NA	NA	NA
WP_034195176.1\|792365_793178_-	formyl transferase	NA	NA	NA	NA
WP_045577891.1\|793174_795757_-	ATP-grasp domain-containing protein	NA	NA	NA	NA
WP_045577892.1\|795760_796765_-	pyridoxal-phosphate dependent enzyme	A0A1W6JHY1	Lactococcus_phage	1.7e-18	30.1
WP_011882439.1\|796774_797677_-	GHMP kinase	NA	NA	NA	NA
WP_034195173.1\|798277_799087_+	hypothetical protein	NA	NA	NA	NA
WP_059862417.1\|799126_799993_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_052691539.1\|800075_801677_+	amino acid adenylation domain-containing protein	A0A2K9L3I8	Tupanvirus	9.2e-38	26.5
WP_034195170.1\|801609_801867_+	acyl carrier protein	NA	NA	NA	NA
WP_011882434.1\|801896_802820_+	chlorinating enzyme	NA	NA	NA	NA
WP_045577895.1\|802909_803146_+	phosphopantetheine-binding protein	NA	NA	NA	NA
WP_045577896.1\|803142_804048_+	alpha/beta hydrolase	A0A286MQU8	Mycobacterium_phage	8.9e-06	31.8
WP_045577897.1\|804044_804623_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_011882430.1\|804688_805312_+	LysE family translocator	NA	NA	NA	NA
WP_052691540.1\|805324_806161_+	thioesterase	NA	NA	NA	NA
WP_045577898.1\|806157_807732_+	gamma-glutamyltransferase	NA	NA	NA	NA
WP_045577899.1\|807766_809290_+	threonine ammonia-lyase, biosynthetic	NA	NA	NA	NA
WP_011882426.1\|809339_809918_+	LysE family translocator	NA	NA	NA	NA
WP_144410622.1\|809982_810243_-	hypothetical protein	NA	NA	NA	NA
WP_045577900.1\|810400_811588_+	porin	NA	NA	NA	NA
WP_011882424.1\|811825_812257_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_011882423.1\|812269_812932_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_080938602.1\|812928_814275_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_106919402.1\|814331_815753_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_011881739.1\|819661_820987_+	hypothetical protein	NA	NA	NA	NA
WP_106919419.1\|821697_824103_+	type VI secretion system tip protein VgrG	NA	NA	NA	NA
WP_011881741.1\|824115_826269_+	hypothetical protein	NA	NA	NA	NA
WP_144410623.1\|826301_827120_+	hypothetical protein	NA	NA	NA	NA
WP_045577903.1\|827154_828288_+	hypothetical protein	NA	NA	NA	NA
WP_045577904.1\|828316_831880_+	type VI secretion protein VasK	NA	NA	NA	NA
WP_014724741.1\|831896_833711_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_045577905.1\|833773_834790_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP009632

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP009632_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009632_1

475819-475906

Orphan

Consensus_repeat	Method
GCCCGACCTGCGACGGCGATGCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP009632_1

>merge|NZ_CP009632|1|475819-475906|CRISPRCasFinder
GCCCGACCTGCGACGGCGATGCGGAGCAATTCATGGTGCTGAGGGACTGACGTTGACCACGCGAAGCCCGACCCGCGACGGCGATGCG

>NZ_CP009632|1|1|475819-475906|CRISPRCasFinder
GCCCGACCTGCGACGGCGATGCG	GAGCAATTCATGGTGCTGAGGGACTGACGTTGACCACGCGAA
GCCCGACCCGCGACGGCGATGCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009632.1\|WP_045579643.1\|473876_474227_+\|HypC/HybG/HupF-family-hydrogenase-formation-chaperone	unknown	unknown	gnl\|CDD\|376549
NZ_CP009632.1\|WP_045579642.1\|465994_467605_-\|carbamoyltransferase	unknown	unknown	gnl\|CDD\|225103
NZ_CP009632.1\|WP_034192889.1\|469384_470458_+\|hydrogenase-small-subunit	unknown	unknown	gnl\|CDD\|224654
NZ_CP009632.1\|WP_011880064.1\|472490_473201_+\|Ni/Fe-hydrogenase,-b-type-cytochrome-subunit	unknown	unknown	gnl\|CDD\|273985
NZ_CP009632.1\|WP_011880073.1\|478033_479071_+\|hydrogenase-nickel-incorporation-protein-HypB	unknown	unknown	gnl\|CDD\|182479
NZ_CP009632.1\|WP_011880077.1\|481620_482697_+\|hydrogenase-expression/formation-protein-HypE	unknown	unknown	gnl\|CDD\|100033
NZ_CP009632.1\|WP_045579645.1\|476415_477669_+\|hydrogenase-maturation-factor-HoxV/HupK	unknown	unknown	gnl\|CDD\|225798
NZ_CP009632.1\|WP_045579646.1\|480233_480491_+\|HypC/HybG/HupF-family-hydrogenase-formation-chaperone	unknown	unknown	gnl\|CDD\|376549
NZ_CP009632.1\|WP_045579647.1\|482817_484320_+\|sigma-54-dependent-Fis-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225114
NZ_CP009632.1\|WP_045579644.1\|474774_475638_+\|hydrogenase-expression/formation-protein	unknown	unknown	gnl\|CDD\|377409
NZ_CP009632.1\|WP_014725812.1\|473208_473886_+\|HyaD/HybD-family-hydrogenase-maturation-endopeptidase	unknown	unknown	gnl\|CDD\|129246
NZ_CP009632.1\|WP_011880072.1\|477656_478004_+\|hydrogenase-maturation-nickel-metallochaperone-HypA	unknown	unknown	gnl\|CDD\|376468
NZ_CP009632.1\|WP_045579943.1\|467636_468704_-\|HoxN/HupN/NixA-family-nickel/cobalt-transporter	unknown	unknown	gnl\|CDD\|225911
NZ_CP009632.1\|WP_011880076.1\|480487_481624_+\|hydrogenase-formation-protein-HypD	unknown	unknown	gnl\|CDD\|237892
NZ_CP009632.1\|WP_011880074.1\|479067_480243_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223146
NZ_CP009632.1\|WP_011880063.1\|470515_472372_+\|nickel-dependent-hydrogenase-large-subunit	unknown	unknown	gnl\|CDD\|366057
NZ_CP009632.1\|WP_011880067.1\|474223_474757_+\|hydrogenase	unknown	unknown	gnl\|CDD\|239263
NZ_CP009632.1\|WP_011880079.1\|484316_485354_+\|NADH-ubiquinone-oxidoreductase	unknown	unknown	gnl\|CDD\|224654
NZ_CP009632.1\|WP_045579640.1\|465148_465457_-\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP009632.1\|WP_011880080.1\|485362_486820_+\|nickel-dependent-hydrogenase-large-subunit	unknown	unknown	gnl\|CDD\|380187

Protein	Function_ID	Function_description	E-value
NZ_CP009632.1\|WP_045579643.1\|473876_474227_+\|HypC/HybG/HupF-family-hydrogenase-formation-chaperone	gnl\|CDD\|376549	pfam01455, HupF_HypC, HupF/HypC family.	7.79732e-22
NZ_CP009632.1\|WP_045579642.1\|465994_467605_-\|carbamoyltransferase	gnl\|CDD\|225103	COG2192, COG2192, Predicted carbamoyl transferase, NodU family [Posttranslational modification, protein turnover, chaperones].	1.38447e-131
NZ_CP009632.1\|WP_034192889.1\|469384_470458_+\|hydrogenase-small-subunit	gnl\|CDD\|224654	COG1740, HyaA, Ni,Fe-hydrogenase I small subunit [Energy production and conversion].	0
NZ_CP009632.1\|WP_011880064.1\|472490_473201_+\|Ni/Fe-hydrogenase,-b-type-cytochrome-subunit	gnl\|CDD\|273985	TIGR02125, CytB-hydogenase, Ni/Fe-hydrogenase, b-type cytochrome subunit. This model describes a family of cytochrome b proteins which appear to be specific for nickel-iron hydrogenase complexes. Every genome which contains a member of this family posesses a Ni/Fe hydrogenase according to Genome Properties (GenProp0177), and most are gene clustered with other hydrogenase components. Some Ni/Fe hydrogenase-containing species lack a member of this family but contain other CytB homologs (pfam01292) which may substitute for it.	6.27348e-76
NZ_CP009632.1\|WP_011880073.1\|478033_479071_+\|hydrogenase-nickel-incorporation-protein-HypB	gnl\|CDD\|182479	PRK10463, PRK10463, hydrogenase nickel incorporation protein HypB; Provisional.	3.54357e-128
NZ_CP009632.1\|WP_011880077.1\|481620_482697_+\|hydrogenase-expression/formation-protein-HypE	gnl\|CDD\|100033	cd02197, HypE, HypE (Hydrogenase expression/formation protein). HypE is involved in Ni-Fe hydrogenase biosynthesis. HypE dehydrates its own carbamoyl moiety in an ATP-dependent process to yield the enzyme thiocyanate. The N-terminal domain of HypE is related to the ATP-binding domains of the AIR synthases, selenophosphate synthetase (SelD), and FGAM synthase and is thought to bind ATP.	9.76796e-174
NZ_CP009632.1\|WP_045579645.1\|476415_477669_+\|hydrogenase-maturation-factor-HoxV/HupK	gnl\|CDD\|225798	COG3259, FrhA, Coenzyme F420-reducing hydrogenase, alpha subunit [Energy production and conversion].	7.57069e-05
NZ_CP009632.1\|WP_045579646.1\|480233_480491_+\|HypC/HybG/HupF-family-hydrogenase-formation-chaperone	gnl\|CDD\|376549	pfam01455, HupF_HypC, HupF/HypC family.	6.05684e-32
NZ_CP009632.1\|WP_045579647.1\|482817_484320_+\|sigma-54-dependent-Fis-family-transcriptional-regulator	gnl\|CDD\|225114	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms].	3.27058e-150
NZ_CP009632.1\|WP_045579644.1\|474774_475638_+\|hydrogenase-expression/formation-protein	gnl\|CDD\|377409	pfam04809, HupH_C, HupH hydrogenase expression protein, C-terminal conserved region. This family represents a C-terminal conserved region found in these bacterial proteins necessary for hydrogenase synthesis. Their precise function is unknown.	1.15477e-48
NZ_CP009632.1\|WP_014725812.1\|473208_473886_+\|HyaD/HybD-family-hydrogenase-maturation-endopeptidase	gnl\|CDD\|129246	TIGR00140, Hydrogenase_expression/formation_protein_HupD, hydrogenase expression/formation protein. valid names: hupD, hynC, hoxM. C at 64 and 67 are believed to be metal binding. Postulated to be involved in processing or hydrogenase. Superfamily suggests that it is a peptidase/protease. [Protein fate, Protein modification and repair].	4.13993e-68
NZ_CP009632.1\|WP_011880072.1\|477656_478004_+\|hydrogenase-maturation-nickel-metallochaperone-HypA	gnl\|CDD\|376468	pfam01155, HypA, Hydrogenase/urease nickel incorporation, metallochaperone, hypA. HypA is a metallochaperone that binds nickel to bring it safely to its target. The targets for Hypa are the nickel-containing enzymes [Ni,Fe]-hydrogenase and urease. The nickel coordinates with four nitrogens within the protein. The four conserved cysteines towards the C-terminus bind one zinc moiety probably to stabilize the protein fold.	3.26172e-39
NZ_CP009632.1\|WP_045579943.1\|467636_468704_-\|HoxN/HupN/NixA-family-nickel/cobalt-transporter	gnl\|CDD\|225911	COG3376, HoxN, High-affinity nickel permease [Inorganic ion transport and metabolism].	1.12068e-126
NZ_CP009632.1\|WP_011880076.1\|480487_481624_+\|hydrogenase-formation-protein-HypD	gnl\|CDD\|237892	PRK15062, PRK15062, hydrogenase isoenzymes formation protein HypD; Provisional.	0
NZ_CP009632.1\|WP_011880074.1\|479067_480243_+\|hypothetical-protein	gnl\|CDD\|223146	COG0068, HypF, Hydrogenase maturation factor [Posttranslational modification, protein turnover, chaperones].	5.28621e-76
NZ_CP009632.1\|WP_011880063.1\|470515_472372_+\|nickel-dependent-hydrogenase-large-subunit	gnl\|CDD\|366057	pfam00374, NiFeSe_Hases, Nickel-dependent hydrogenase.	0
NZ_CP009632.1\|WP_011880067.1\|474223_474757_+\|hydrogenase	gnl\|CDD\|239263	cd02965, HyaE, HyaE family; HyaE is also called HupG and HoxO. They are proteins serving a critical role in the assembly of multimeric [NiFe] hydrogenases, the enzymes that catalyze the oxidation of molecular hydrogen to enable microorganisms to utilize hydrogen as the sole energy source. The E. coli HyaE protein is a chaperone that specifically interacts with the twin-arginine translocation (Tat) signal peptide of the [NiFe] hydrogenase-1 beta subunit precursor. Tat signal peptides target precursor proteins to the Tat protein export system, which facilitates the transport of fully folded proteins across the inner membrane. HyaE may be involved in regulating the traffic of [NiFe] hydrogenase-1 on the Tat transport pathway.	1.19404e-47
NZ_CP009632.1\|WP_011880079.1\|484316_485354_+\|NADH-ubiquinone-oxidoreductase	gnl\|CDD\|224654	COG1740, HyaA, Ni,Fe-hydrogenase I small subunit [Energy production and conversion].	1.62496e-67
NZ_CP009632.1\|WP_045579640.1\|465148_465457_-\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	4.31746e-05
NZ_CP009632.1\|WP_011880080.1\|485362_486820_+\|nickel-dependent-hydrogenase-large-subunit	gnl\|CDD\|380187	NF033181, NiFeSe_hydrog, nickel-dependent hydrogenase large subunit. Members of this family are the large subunit of the periplasmic nickel-dependent hydrogenase. Some members contain a selenocysteine residue.	5.6028e-128

>NZ_CP009632.1|WP_045579644.1|474774_475638_+|hydrogenase-expression/formation-protein
MQMKTFPVPVVPFGPGSQPEGDAVLDYMPMPQAMHTFVAPSLPERADARALDVVRGILLTVLDALDACRRGEQPAPIDLTACDADALRILNAVLGEGEVSARIDTADAGSVLIQETVFAGVWRIAEDGPAGRAERIEVGGAPAALAAAAHAAAAPELPVSDTHPSGVMNAPAILTEVRDQVARWRAGAAPHVINLTLLPLSSEDGAFIDAVLGGGPVSVLSRGYGNCRIASTGVVHCWRIAYFNSQDTLILNTIEITNLPEIVQAAPEDIDDSHERLAQLIDWVEEA
>NZ_CP009632.1|WP_011880067.1|474223_474757_+|hydrogenase
MSETSGSVPGATQADAPNVPNVPNAAAAGQDCPAVVQRLIEQAHATFVDEHTLDGWLADGGECVVLLMGDPVRFPESLDVAAVLPELAHVAAVRFGRALRLAVATRAGENAIARRFGSLRWPALLWLRDGQYVTVLSGMMDWDDYVKCVADALAGPTTRAPSIGIPVNVAGGSSGCH
>NZ_CP009632.1|WP_045579643.1|473876_474227_+|HypC/HybG/HupF-family-hydrogenase-formation-chaperone
MCIGLPMQVVEAQPGHAWCVGRGVRRRVDTALVGPCAPGDWLLVFLDAARERLDAARAAEIDATLALIESVMAGEGGAASPAAFALPSALGVDELNRLVGGPQRAAGSLAVPEESK
>NZ_CP009632.1|WP_014725812.1|473208_473886_+|HyaD/HybD-family-hydrogenase-maturation-endopeptidase
MDTSPQTIPSAQDGAAIVALGIGNVLWADEGFGVRCIEALQQRFECAPNVTLMDGGTQGLYLIQHVQAADFLLIFDAVDYGLAPGELKIVEDDEVPKFLGVRKMSLHQTGFQEVLMLAQLTGKYPRRVVLIGCQPEEIEDYGGSLRPCVKAALERALDAGVAYLREWGGAPLPRRTALRDDEAVTLHHLALARYEGERPSEADACRIGDERVLVRALAKEPPSCA
>NZ_CP009632.1|WP_011880064.1|472490_473201_+|Ni/Fe-hydrogenase,-b-type-cytochrome-subunit
MTMQTQSRRGRAPDTVPAAKAIYVYEAPVRIWHWMNAASIAVLSITGYLIGSPLATQPGEASAHFLMGYIRFAHFAAAYLFAVGLAGRAYWALVGNHHAREMFWVPVFTRDYWLDVFGMLRYYMFLGPCPRQYSGHNPLSRFAMFFVFLTVSLFMVVTGFALYGEGAQAGSWQQRTFGWIRPLLGQSQGVHTWHHLGMWAILLFVILHVYAAIREDIMGRQSVVGSMISGYRTFKD
>NZ_CP009632.1|WP_011880063.1|470515_472372_+|nickel-dependent-hydrogenase-large-subunit
MTAYSTQGFQLDNSGRRIVVDPVTRIEGHMRVEVNVDSNNVIRNAVSTGTMWRGLEVILKGRDPRDAWAFVERICGVCTGCHALASVRAVEDALDIRIPPNAHLIREIMAKTLQVHDHAVHFYHLHALDWVDVVSALKADPKLTSELQQRVSPSHPMSSPGYFRDIQTRLRKFVESGQLGPFMNGYWGNPAYLLPPEANLMAVTHYLEALDLQKEWVKIHTIFGGKNPHPNYLVGGVPCAINIDGDLAAGAPINMERLNFVRSLIDQAETFCRNVYVPDLLAIGTIYKARGWLHGGGLAATNVMDYGTYPLVNYDPSTNQMPGGAILNGDWDNILPVDARDPEQVQEFVTHSWYQYPDNDRGLHPWDGMTEPHYELGPNTKGTRTAIESVDESAKYSWVKAPRWRGHAMEVGPLARYILGYAHAKQGNPHGARIKEQIDAALQSVNQDMPKLLGLPETTLGAKQLLPTTIGRTLARALEAQYCAEMMSDDWQRLVDNIRNGDTSTANVEKWDPSTWPAEAKGVGTVAAPRGALGHWIKIKDGRIENYQCVVPSTWNGGPRDAKGQIGAFEASLMNTPMANPEQPVEILRSLHSFDPCMACSTHVMSEDGAEMTTVTVR
>NZ_CP009632.1|WP_034192889.1|469384_470458_+|hydrogenase-small-subunit
METFYEVMRRQGISRRSFLKFCSLTATSLGLGPAFMPRIVEAMETKPRTPVLWLHGLECTCCSESFIRSAHPLAKDVVLSMISLDYDDLLMASAGHQAEAILEEVMTKYKGNYILAVEGNPPLNQDGMSCIIGGKPFVDQLRRVSKDAKAVISWGSCASWGCVQAAKPNPTQAVPIHKVITDKPIIKVPGCPPIAEVMTGVITYMLTFDRVPELDRQGRPKMFYSQRIHDKCYRRPHFDAGQFVEAWDDDAARRGYCLYKVGCKGPTTYNACSTVRWNGGTSFPIQAGHGCIGCSEDGFWDKGSFYDRLTHINQFGVEANADKIGGTAAVVLGAAAAAHAAASAIQRVSSKRDRDGR
>NZ_CP009632.1|WP_045579943.1|467636_468704_-|HoxN/HupN/NixA-family-nickel/cobalt-transporter
MTAPVLPGAGGRASGARGKLVLLLAALAAFNLAAWGWAVAVFGGQPTLMGACVLAYTFGLRHAVDADHIAAIDNVTRKLMHEGRRPLTVGLMFSLGHSTIVIVASAAIAAAAFGLRERLAAFHDIAGTIGTLVSTTFLLAIAVANLVTLHSVVRTLRRVKRGERYADAHADTAPHHHGFLARLLRPVLRMVTKSWHMYVLGALFGLGFDTATEIGVLGISATSAAHGMSAWSIMVFPALFTASMSLVDTADSMLMLGVYGWAFREPVRKLYYNVGITALSAAVALLIGCVEGFALLGDTFGIRGAFRDVVDALNAHLGALGYAIVVLCAASWLVCAAIYRFRRGSFAPLAEHDHG
>NZ_CP009632.1|WP_045579642.1|465994_467605_-|carbamoyltransferase
MSHRIPPAHADGVLGVQTGPAPNTGAAWVATAAGARRIAHAGQERFDRIKQSRAYPAAAVDACRIALDLPADARPSLVACVDTGQAAPLPPYVDTVPQLRVEHALCHAAAAYYCSPFDEAAILVVDGHRHEQGATPSSHSVWIGWNGRIEPVMCSASCGIGALYEAVTVAIGFGAHETGKTMGLAPYGDDAAAPDLGGRLDGLAVDYGARCDADGARLFGLSPLAGATDDESLAARATLARAAQRECERAMLHLARAVREITGMRRLCLAGEVSLNGRANDLVWRDAGFDAVFAGPAGADCGTSLGAALWGYHGVQGVPFRPGPFSPYGGRPYGDADVDAALAALPDRARYRDTRGTIDELAERTAALLAAGQCVALHAGRAEMGPRALGNRSLLMSPAHADARDRMNLRVKRREAFRPFAPCVPVEDAARYFELDTPSPYMLRICAVRPQWRARIAAITHVDGTARPQTVSPQDNPHLHRLLRAFERVAGIPVLLNTSFNVAGEPLVETPADALRGFARNDIDALWIGDRLLEKR
>NZ_CP009632.1|WP_045579640.1|465148_465457_-|IS3-family-transposase
MIDRTHALPVSRQTRLVGIARSSVYYRPQPVSEVDRLLMRRIDEQHMEFPFSGAPMLARLLRREGHEVGRRRVRTLMKRMGVEALCRDRKFCQLASVELLAE
>NZ_CP009632.1|WP_045579645.1|476415_477669_+|hydrogenase-maturation-factor-HoxV/HupK
MTGVASTSEDTSGFAALAGRYVVRPGRSPSIDGGRPPLAGLLLAGQPAALAAPRLSAVFSLCGRAHALCAELAVTAAGAYANAGGAAGDCGGKGDADGNVDRNGAGDDHDASRGEGKRDGEDARSATLARETIAEHLRRIWLDWPARLVGGAPCALPDVRAAGTREWIERHVLGEPADGWLARWDQDPRACLSAWTARATSFPASLLLHCRTVADALRMPPRALRIDGADRARLRRIGAAIAGDPRFAQRPEQDGAPAETGVWTRCGDPHAAAYDSAWLRLGARVAELARLAAGGPAAFALRSGALALAPGEALAWCETARGVLIHWVRLVPGDAARVADYRVASPTEWNFHPDGTLAHALARVDVRPDGGGDAGLAARVGALMGAFDPCIAYALETAAPVRRDDDHTNGNRSTCMK
>NZ_CP009632.1|WP_011880072.1|477656_478004_+|hydrogenase-maturation-nickel-metallochaperone-HypA
MHEVSLAGGVLAAVEAAAARERFARVNVLRLEVGRLAGVEVDALRFALDAMAPGTCLAGARIEIAEPPGRAWCLNCHCDVPLAARGEPCGRCGGYWLQPNGGTELRIVDMLVDDA
>NZ_CP009632.1|WP_011880073.1|478033_479071_+|hydrogenase-nickel-incorporation-protein-HypB
MCVVCGCDSPDGAHLDRHDAHHAHHDAQAHVRADAASGDLHYGLGPAGVTVHGLDQGRTVRIEQDVLGENDRHAAHNRRHFAAHGVRALNLVSSPGSGKTTLLCATIAALRARAPTLPIAVIEGDQQTANDAERIRAAGAPAIQVNTGKGCHLDAAMVAAAYERLPLHAHGHDHGHAHGHGHEHHHHDHDHHHPHDAHASSERRGAAQQPDSVLFIENVGNLVCPALWDLGEDAKVAILSVTEGEDKPLKYPDMFAAARLMIVNKTDLLPYVQFDVERCIEYARRINPALDVICVSATTGDGIDAWLDWVLRTGDARGPLAARIGELEAELAALRAQQRRAGDAA
>NZ_CP009632.1|WP_011880074.1|479067_480243_+|hypothetical-protein
MTLRRERLPRAWGADTVLATGAWLKNAACVYVDGDVYWSPLHGDLDDPRHCVALEASVASLVDAARQAGRPVRAIAHDLHPDFHSSRLAVEWSERLGVPAIAVQHHHAHIGAVAAEHGLAEPVVGLALDGVGLGTDGAAWGGELLEVAPDGWRRLGHLTPLALPGGDVAAREPWRMAAAALHTLGRADEIEARLGGDVGTRAARTIGTMLARGLNCPPSTGAGRWFDAAAGLLGVCRHQCTEAEAAIALERHAADYLRDHPEPDTDGLWRIADDGELDLRPLLVRVLELADAGASAHGAALFHLALADALAAWAAAAAHGRAVLLGGGCFANRLLSARLRAALDARGVRSCAPSSVPCGDAGLALGQAWVAAHTLTSGAVRATSEGVSTCV
>NZ_CP009632.1|WP_045579646.1|480233_480491_+|HypC/HybG/HupF-family-hydrogenase-formation-chaperone
MCLAIPARVVELRDADMGVVDLGGVRKTISLALVPDARLGEYVIVHVGYALGRIDPDEAERTLALFGELAHAAGDGDVQPSGAPQ
>NZ_CP009632.1|WP_011880076.1|480487_481624_+|hydrogenase-formation-protein-HypD
MKYIDEFRDRALAERISARIQAEAQPGTRYHFMEFCGGHTHAISRYGVTDLLPDNVRMIHGPGCPVCVLPVGRIDLAVQLALERGVIVCTYGDTMRVPASGGMSLMRAKAHGADIRMVYSPLDALKIARLNPDREVVFFAIGFETTTPPTALIVRDAAAAGVDNFSVLCCHVLTPAAITHLLAAPAVAADAVPLDGFIGPAHVSIVIGSAPYEGFARDYRKPVVIAGFEPLDVMQAILMLIRQVNDGRAEVENEFSRAVTRAGNAAAQALMDDVFEARESFEWRGLGEVPASALRIRAKYARHDAEARYGLVYRPVADHRKCECGAILRGLKQPRDCSLFGTVCTPENPMGSCMVSSEGACAAHYSYGRFKDIPLVPA
>NZ_CP009632.1|WP_011880077.1|481620_482697_+|hydrogenase-expression/formation-protein-HypE
MSSTPTPRTKPAYVRPLNFRDGRIDMGHGAGGRASAQLIRELFVAAFDNEWLRQGNDQAAFAPPATAPGERVVMATDAHVVSPLFFPGGDIGSLAVHGTVNDVAMSGARPLYLAASFIIEEGFALADLKRIVESMANASRECGVPIVTGDTKVVERGKGDGVFITTTGVGVVPAGIRIDGALARPGDAVLLSGTIGEHGVAIMSTREALEFDVEISSDSAALHTLVASMLAAVPGVRVLRDPTRGGLATTLNEIASQSGVGMLIREDAIPVLPQVDAACELLGLDPLYVANEGKLVAVCAAEDAPALLAAMRAHPLGAHAVQIGEVTEDAHGFVQVETKFGGRRIADWLSGEQLPRIC
>NZ_CP009632.1|WP_045579647.1|482817_484320_+|sigma-54-dependent-Fis-family-transcriptional-regulator
MSSPLPVHPSTDPEPDPAPLRRPPTVLVVDDELRAQETIRRVLDEEFEVLTASSADEARAILQQQPVAVILCDQRMPGRTGVEFLSEVRETWPDTVRIIVSGYTDSEDIVAGINQAGIHRFVLKPWMPDHLLHTVRQAAEAQSLQQDMHRLDLELRNSVPLLRQRSHEKLAQVQNTLGFDAIVRAPGSPLDPICKLASKLARYDLSILILGESGTGKEMLARAIHYASPRAAGPFVVENCAAVADTLLESELFGHKRGAFTGAVHDHAGLFQRANGGTIFLDEIGDTSLAFQVRLLRVLQEGEVRPVGATRAVPVDVRVIAATHRDLEREVEAGRFREDLYYRIATATLALPPLRERSGDLVPIAHRLLQAIAEHESRPAGLDFARDALAVLLGYAWPGNIRELRNEIYRAVALSDDDLIRADAFSPKVLRGQSGPAARGPEAQIASAGTLQERLDAMETMLIKEALLRHRWNKTRAASELGLSRAGLRQKMQRFGLEKK
>NZ_CP009632.1|WP_011880079.1|484316_485354_+|NADH-ubiquinone-oxidoreductase
MSVDTRAPDGTGAFNVLWLQSGGCGGCNMSLLCADTPDFSGMLSRAGIRLLWHPSLSLETGADARDVLLACLDGTVELHALCVEGAMLRGPNGTGRFHVLAGTGVPMIDWVARLASVAHYTVAIGTCAAYGGITAAGANPADACGLQYDGDQPGGLLGAAYRSRSGFPVVNVAGCPTHPDWVVETLSALSMSLLDPAALDTLGRPRFYADQLVHHGCTRNEFYEYKASAVRPSDLGCMMEHMGCKGTQAHADCNTRLWNGDGSCTRGGYACINCTEPGFEEPGHAFHRTPNVAGIPIGLPSDMPKAWFVALASLSKAATPKRVRENATADHLKVAPAVRSRPRNK
>NZ_CP009632.1|WP_011880080.1|485362_486820_+|nickel-dependent-hydrogenase-large-subunit
MSRLVIGPFNRVEGDLEVRIEVVDGRVSDAHVNATMFRGFEQILLDRDPLDALVYVPRICGICSVSQGVAAARALADLAGVTPAPNGQIATNLMLAAENLADHLSHFYLFFMPDFVRPVYAARAWHAEAVSRFTPYQGERHRASLAARQRWLRLMGTLGGKWPHTGSIQPGGSARAIDNAERIRLLGFIGEFRQFLEEVLFDAPLEEIAQLDSEAALAAWRARGERRGDLRFFLTLADDLGLDRLGAGPDLYLSYGAYPQPDGAHAFRGGVWDAQRKQADALDLDAITEDATHAWLDDAGGARHPFAGLTEPRADKPGAYTWNKAPRLNGAVLETGAIARQLADGHPLIADAVARCGGSVYTRVLARLLELARVVPMMEQWVRALAPGMPYCAAFALPDEGRAVGLNEAARGSLGHWLAVKDGRIANYQIIAPTSWNFSPRDAGGRPGALEAALIGAPVEPGETTPVAVQHIVRSFDPCMVCTVH

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Crispr_ID: NZ_CP009632_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009632_2

675689-676040

Orphan

Consensus_repeat	Method
GAGAGGCCCGTGGAGAGCGAACTCACGCCGGTCGACAGCGAGCTGGCCGTCGTCGACGTCGAGG	PILER-CR

3 spacers

The CRISPR arrays of NZ_CP009632_2

>merge|NZ_CP009632|2|675689-676040|PILER-CR
GAGAGGCCCGTGGAGAGCGAACTCACGCCGGTCGACAGCGAGCTGGCCGTCGTCGACGTCGAGGTCGACAACGACGCCACGTTGCTGTTTGTCGTGGAGAGGCCCGTGGAGAGCGAACTCACGCCGGTCGACAGCGAGCTGGCCGTCGTCGACGTGGAAGTCGACAGCGACGCCACATTGCTGTTCGTCGTGGAGAGGCCCGTGGAGAGCGAGCTCACGCCGGTCGACAGCGAGCTGGCCGTCGTCGACGTCGAGGTCGACAGCGACGCAACGTTGCTGTTTGTCGTGGAGAGGCCCGTCGAGAGCGAGCTCACGCCGGTCGACAGCGAGCTGGCCGTCGTCGACGTCGAGG

>NZ_CP009632|2|1|675689-676040|PILER-CR
GAGAGGCCCGTGGAGAGCGAACTCACGCCGGTCGACAGCGAGCTGGCCGTCGTCGACGTCGAGG	TCGACAACGACGCCACGTTGCTGTTTGTCGTG
GAGAGGCCCGTGGAGAGCGAACTCACGCCGGTCGACAGCGAGCTGGCCGTCGTCGACGTGGAAG	TCGACAGCGACGCCACATTGCTGTTCGTCGTGGAG
AGGCCCGTGGAGAGCGAGCTCACGCCGGTCGACAGCGAGCTGGCCGTCGTCGACGTCGAGGTCG	ACAGCGACGCAACGTTGCTGTTTGTCGTGGAG
AGGCCCGTCGAGAGCGAGCTCACGCCGGTCGACAGCGAGCTGGCCGTCGTCGACGTCGAGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009632.1\|WP_045579738.1\|666607_667750_-\|DUF2827-domain-containing-protein	unknown	unknown	gnl\|CDD\|371305
NZ_CP009632.1\|WP_059669413.1\|665041_665353_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009632.1\|WP_045579747.1\|690784_691558_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|181681
NZ_CP009632.1\|WP_045579740.1\|669487_670621_-\|DUF2827-domain-containing-protein	unknown	unknown	gnl\|CDD\|371305
NZ_CP009632.1\|WP_052691595.1\|681272_681980_-\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|376350
NZ_CP009632.1\|WP_144410691.1\|680754_681228_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009632.1\|WP_045579737.1\|665390_665738_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009632.1\|WP_106919380.1\|686644_686881_-\|energy-transducer-TonB	unknown	unknown	gnl\|CDD\|367555
NZ_CP009632.1\|WP_045579739.1\|668369_669491_-\|DUF2827-domain-containing-protein	unknown	unknown	gnl\|CDD\|371305
NZ_CP009632.1\|WP_080938782.1\|687165_688008_-\|recombinase-family-protein	unknown	unknown	gnl\|CDD\|239737
NZ_CP009632.1\|WP_045579741.1\|670809_671505_-\|OmpA-family-protein	unknown	unknown	gnl\|CDD\|143586
NZ_CP009632.1\|WP_144410690.1\|662771_663008_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009632.1\|WP_144410692.1\|682163_682382_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009632.1\|WP_045579746.1\|689717_690308_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|366760
NZ_CP009632.1\|WP_045579972.1\|667746_668361_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009632.1\|WP_052691590.1\|665751_666585_-\|peptidyl-prolyl-cis-trans-isomerase	unknown	unknown	gnl\|CDD\|131971
NZ_CP009632.1\|WP_045579745.1\|682482_683106_+\|recombinase-family-protein	unknown	unknown	gnl\|CDD\|239737
NZ_CP009632.1\|WP_106919390.1\|663128_664997_-\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP009632.1\|WP_106919379.1\|683149_684523_+\|galactosyl-transferase-GMA12/MNN10-domain-protein	unknown	unknown	gnl\|CDD\|368535
NZ_CP009632.1\|WP_052691596.1\|684495_685908_+\|S41-family-peptidase	unknown	unknown	gnl\|CDD\|223864

Protein	Function_ID	Function_description	E-value
NZ_CP009632.1\|WP_052691595.1\|681272_681980_-\|EAL-domain-containing-protein	gnl\|CDD\|376350	pfam00563, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues. The EAL domain is a good candidate for a diguanylate phosphodiesterase function. The domain contains many conserved acidic residues that could participate in metal binding and might form the phosphodiesterase active site.	1.54705e-24
NZ_CP009632.1\|WP_052691596.1\|684495_685908_+\|S41-family-peptidase	gnl\|CDD\|223864	COG0793, Prc, Periplasmic protease [Cell envelope biogenesis, outer membrane].	3.60891e-96
NZ_CP009632.1\|WP_045579738.1\|666607_667750_-\|DUF2827-domain-containing-protein	gnl\|CDD\|371305	pfam10933, DUF2827, Protein of unknown function (DUF2827). This is a family of uncharacterized proteins found in Burkholderia.	1.03576e-173
NZ_CP009632.1\|WP_106919380.1\|686644_686881_-\|energy-transducer-TonB	gnl\|CDD\|367555	pfam03544, TonB_C, Gram-negative bacterial TonB protein C-terminal. The TonB_C domain is the well-characterized C-terminal region of the TonB receptor molecule. This protein is bound to an inner membrane-bound protein ExbB via a globular domain and has a flexible middle region that is likely to help in positioning the C-terminal domain into the iron-transporter barrel in the outer membrane. TonB_C interacts with the N-terminal TonB box of the outer membrane transporter that binds the Fe3+-siderophore complex. The barrel of the transporter, consisting of 22 beta-sheets and an inside plug, binds the iron complex in the barrel entrance.	2.86078e-06
NZ_CP009632.1\|WP_045579739.1\|668369_669491_-\|DUF2827-domain-containing-protein	gnl\|CDD\|371305	pfam10933, DUF2827, Protein of unknown function (DUF2827). This is a family of uncharacterized proteins found in Burkholderia.	0
NZ_CP009632.1\|WP_080938782.1\|687165_688008_-\|recombinase-family-protein	gnl\|CDD\|239737	cd03768, SR_ResInv, Serine Recombinase (SR) family, Resolvase and Invertase subfamily, catalytic domain; members contain a C-terminal DNA binding domain. Serine recombinases catalyze site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and the enzyme. They are functionally versatile and include resolvases, invertases, integrases, and transposases. Resolvases and invertases affect resolution or inversion and comprise a major phylogenic group. Resolvases (e.g. Tn3, gamma-delta, and Tn5044) normally recombine two sites in direct repeat causing deletion of the DNA between the sites. Invertases (e.g. Gin and Hin) recombine sites in inverted repeat to invert the DNA between the sites. Cointegrate resolution with gamma-delta resolvase requires the formation of a synaptosome of three resolvase dimers bound to each of two res sites on the DNA. Also included in this subfamily are some putative integrases including a sequence from bacteriophage phi-FC1.	1.19409e-55
NZ_CP009632.1\|WP_045579741.1\|670809_671505_-\|OmpA-family-protein	gnl\|CDD\|143586	cd07185, OmpA_C-like, Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA. OmpA-like domains (named after the C-terminal domain of Escherichia coli OmpA protein) have been shown to non-covalently associate with peptidoglycan, a network of glycan chains composed of disaccharides, which are crosslinked via short peptide bridges. Well-studied members of this family include the Escherichia coli outer membrane protein OmpA, the Escherichia coli lipoprotein PAL, Neisseria meningitdis RmpM, which interact with the outer membrane, as well as the Escherichia coli motor protein MotB, and the Vibrio flagellar motor proteins PomB and MotY, which interact with the inner membrane.	1.05543e-40
NZ_CP009632.1\|WP_045579746.1\|689717_690308_+\|ATP-binding-protein	gnl\|CDD\|366760	pfam01695, IstB_IS21, IstB-like ATP binding protein. This protein contains an ATP/GTP binding P-loop motif. It is found associated with IS21 family insertion sequences. The function of this protein is unknown, but it may perform a transposase function.	1.1729e-54
NZ_CP009632.1\|WP_045579747.1\|690784_691558_-\|AAA-family-ATPase	gnl\|CDD\|181681	PRK09183, PRK09183, transposase/IS protein; Provisional.	4.82032e-148
NZ_CP009632.1\|WP_052691590.1\|665751_666585_-\|peptidyl-prolyl-cis-trans-isomerase	gnl\|CDD\|131971	TIGR02925, hypothetical_protein_Nmul_A0241, peptidyl-prolyl cis-trans isomerase, EpsD family. Members of this family belong to the peptidyl-prolyl cis-trans isomerase family and are found in loci associated with exopolysaccharide biosynthesis. All members are encoded near a homolog of EpsH, as detected by TIGR02602.	1.58123e-08
NZ_CP009632.1\|WP_045579745.1\|682482_683106_+\|recombinase-family-protein	gnl\|CDD\|239737	cd03768, SR_ResInv, Serine Recombinase (SR) family, Resolvase and Invertase subfamily, catalytic domain; members contain a C-terminal DNA binding domain. Serine recombinases catalyze site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and the enzyme. They are functionally versatile and include resolvases, invertases, integrases, and transposases. Resolvases and invertases affect resolution or inversion and comprise a major phylogenic group. Resolvases (e.g. Tn3, gamma-delta, and Tn5044) normally recombine two sites in direct repeat causing deletion of the DNA between the sites. Invertases (e.g. Gin and Hin) recombine sites in inverted repeat to invert the DNA between the sites. Cointegrate resolution with gamma-delta resolvase requires the formation of a synaptosome of three resolvase dimers bound to each of two res sites on the DNA. Also included in this subfamily are some putative integrases including a sequence from bacteriophage phi-FC1.	1.31421e-50
NZ_CP009632.1\|WP_106919390.1\|663128_664997_-\|tetratricopeptide-repeat-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	3.77308e-16
NZ_CP009632.1\|WP_106919379.1\|683149_684523_+\|galactosyl-transferase-GMA12/MNN10-domain-protein	gnl\|CDD\|368535	pfam05637, Glyco_transf_34, galactosyl transferase GMA12/MNN10 family. This family contains a number of glycosyltransferase enzymes that contain a DXD motif. This family includes a number of C. elegans homologs where the DXD is replaced by DXH. Some members of this family are included in glycosyltransferase family 34.	2.43454e-06
NZ_CP009632.1\|WP_045579740.1\|669487_670621_-\|DUF2827-domain-containing-protein	gnl\|CDD\|371305	pfam10933, DUF2827, Protein of unknown function (DUF2827). This is a family of uncharacterized proteins found in Burkholderia.	6.86669e-158

>NZ_CP009632.1|WP_045579741.1|670809_671505_-|OmpA-family-protein
MLQRTKVVLLSAAVLAGCSASGPTFNAYSLRLANGEQAYRVDCYGIFEGQGTCHKKAEEICGNQPVRALEDAAPLGSTSDGKPNTRILTFQCGVPSAPPPVVAPVPVPVPPPPPPPPAKVVLGGDANFDTAKWTLRPEARAKLDKLVSDASGATFALVTVKGYTDSRGSDAYNLNLSQHRAETVAAYLRDHGLQAQRYAAHGYGKADPVASNDTVEGRAKNRRVEIQLDQR
>NZ_CP009632.1|WP_045579740.1|669487_670621_-|DUF2827-domain-containing-protein
MRIGISILTHAGQNIWENGLGQNVFFLARLLRALPFVTDVVLLNCGDQTSVAANAQDGGQPLRLIPMREATECIDVAIEMGGGLDVEWLDYLRARGKRVVFFCCGQPYVGLIEPSVFKRSGYFTRANRCDAIWILSKDRDFAPMLRTLHRCPVIEVPYLWDPVFVEQRAAEIERAGLHFGYQARQEHERGLRVAIFEPNISVVKNCAIPLLVCEAAARAEPESVSRVHVLNSVQMQRHPTFEFLTRSLELARDNKLQLDQRHDFVGYMSQFANAVVSHQWHNDQNILYLDALYGDYPLIHNAPWIAELGYYYPDSDIEQGASQLVSAASDHDDQLSHYRHRSRAFLSALSSQTRANRIAYAQCLLHLVGRTAQEGAR
>NZ_CP009632.1|WP_045579739.1|668369_669491_-|DUF2827-domain-containing-protein
MSVTKRLKIGVTIFLRKGHQSIWENGIFQNCYFLAQLLQRSPLIDSVVLVNGGDGEPHEAQAFLEHSPAPVIDLETARMELDVVIELSAQLNPDWARAFCARGGHVIGMRVANDYVIDIERMMFDLPHGMLASGTPYSAIWTLPAFERSCASYYGAALRAPVRAMQHLWSPALLERTLASSGNEGFGYAPGRERWRLAILEPNICMVKTSHVPMLLADLAHRQDPSFIEHLRVFNTLHLKDDAQFAGFARSLDLVNHGRATFEPRVPIYEILNRQADAIVAHHWENAQNYVYYEALYGGYALIHNSAFLSGCGYRYADFDCEDGALALRRAFAEHDVDLVRYRDEARQFLATLDPLAESNVAQYGAAIAELYE
>NZ_CP009632.1|WP_045579972.1|667746_668361_-|hypothetical-protein
MKRHGLVRGVGPAIRASLVSAAVAASVLAHAQGLAGDGAATPTPTPTPPTSVVTTPATVLGRAAHAIGIRRCAGAIDAVASRAFVNAQRQDVVLDWDRSNPDGAPFFSLSGIEYRESSAILSLTTSPALQGGCTILAERISSAPLACREVARAELTGYQAAALVRGVTVYVDPHHSRETVTLVEAPPSCVIVRRQVQFSWGVSR
>NZ_CP009632.1|WP_045579738.1|666607_667750_-|DUF2827-domain-containing-protein
MNGQQQRQHPRALRIGITIGLHNEAESLWVNGIKQNALYLMRVFQHSPLKHAVCLVNTTQVAITPQLPWDLTQFPVKPFEAAKDDLDVLVELGGQINEAQCKYLQSRGARVVSYCCGPEYVQMMEAMIFRRRMTDQVFINQCYDQVWVIPQVMETSAHFFQTLRRKPVHQVPFVWDPMCLDARTVNLPNGGQYRPHAGPKRLSIMEPNIDVMKFCLYPLLIAEQAYRRVGAQIAHVHVTNADWLALGSPEFIGVMQYLDLVREHKASFVGRYETPQFLSELTDVVISHQWGLALNYYYFDVCWNGYALVHNAQLCAGLGYFYQGNDVEAGARQLVTALTRHDEQWQDYRTRQREVIGGFLATNPKVVAQYDQLLAGLFRG
>NZ_CP009632.1|WP_052691590.1|665751_666585_-|peptidyl-prolyl-cis-trans-isomerase
MAGWMLVGCLAAAMGRAAESSASAQVALPTGTVALVNDVPIVRGEVDDVLAKTHLPDSPEMREVAVRGLIGRELVRQAALGEGLDRAPTVAGLTGTTRVNAENRLYLERHLQVPAVTDAQVKSAYDAMVAEQGPREYQTRIIAVRDAASAAGVLEKLKAGVAFDEVARETSMDSTREAGGALPWVSFKTPPAEGKTMGVALPIAQEIARLQPGQVSSTPIAVAGQFVIVKLEASRPTQTPSYDVAAPGVRKFLEARGRNAAFERLVAGLAEHARIVR
>NZ_CP009632.1|WP_045579737.1|665390_665738_-|hypothetical-protein
MRSFDSTDRFVANVFGAGAMTCAMTMMVGLLEMVWPTMNRISGWQRLALTTVVTVAFVTLVYAMATGLAYRTRKRSWLHRDSGARRAARQGRVVGIVAGLLMGNAFVLWWGSPLP
>NZ_CP009632.1|WP_059669413.1|665041_665353_-|hypothetical-protein
MTDYTDRFVGNTLIGIALTIAIVVVGMGLLDDLAGHWIARAWTQFGVTFVVAGGLLFTQPLVSRRLHRHEVLSSPVDAAVWLGRSVGWLVGALMGAVLASQFN
>NZ_CP009632.1|WP_106919390.1|663128_664997_-|tetratricopeptide-repeat-protein
MESLTQVEDLLETGDLLGAQRALNHYRPRNDDAQAYTLMSQLLRLRGRADQARALLDVYCVHYPSTRAMEIERARVALSLGDLKAADEAFAHASVEDAFDEDWVQEWIEVSSQLGHHANAIRLALMRCQHKPGEATRWFALGLVYQRARMHQQAMDAYAEVAQRDPHAPMLHNNIGAAHLELKAYASAQHELGLALRLDPGNALAWTNLATAALKQGKLDDALVAVERACALAPNYPTALQTYSYVLKECQQWQAALHVAQRALSLEPSNASMMWSVAMLELLLGDYSNGWLHHEARWAGSPELRDVAPNLPMPRWQGEPLAGKTLFVWGEQGHGDVFQFVRFVPALAERVEREGGSLIYSGFQHLQTLLARSLHGVVDTVVPHDQAELPRADFHLPLASIPFMQGITPEQLPVRTNYLRANPAKLDAWRRRLQKASSALKVGLVWSGSRSHQRNALRSVPPQALAQVFASAQAIEWFSLQLDAAEDVAALRAGGMTLVDVSEELHSFDDTAAIIANLDLVITVCTSVAHLAAAMGRPTWVLLDVNPHWVWMTERRDSPWYPSVTLYRQADYGDWTPVLEQVVKDLSALAVKRGPVPDYSPKRTSKGNSNDASTTRRAREST
>NZ_CP009632.1|WP_144410690.1|662771_663008_-|hypothetical-protein
MSARDSRARCNIRHIARAWCDRMVRAARRLSTSRQLGLGVLLGFALGLIAMLVIVLQSAEPPVPRVVASPRGAAVRWR
>NZ_CP009632.1|WP_144410691.1|680754_681228_-|hypothetical-protein
MSAMARPTKWKPIPGKELNLAGEAGGAVLQALSDCLGRCGESAPSMDRAEDWLEGLRRCAHLLVALHLPEWVSQATQAYDAGLAQGFYGTASAIGVGMEECLPGTGSGNSHVPLREPESSGHSDDQTIENQVRELTKSLRVLGREHGDELRRWLGLG
>NZ_CP009632.1|WP_052691595.1|681272_681980_-|EAL-domain-containing-protein
MTDMRVAEQIWDAMRTHRIQLHFSRIHRADDPNDVLYRECLARIPVADGQWRAASALLPALTRLNLVSTFERYVLRRVIQFLRDHPDEIVGVNFQCDGFDSAWTAALLELEVETDVAKRLIVEVPETSHVSREFVQFIRRAGCRIAIDGYGVAYGMRADIAIGHPDIVKFDPSLLTEARQADAGLEQLSRLIRLASDVATEAVVLTGVRGPQDLSVAARAGAPWVQPARDEPGAP
>NZ_CP009632.1|WP_144410692.1|682163_682382_+|hypothetical-protein
MKDKNDRLCPVEFGRDSNSFTILNSRLLWIKLFRCFADDGACNALHVAGVQAAIDIRLIWPSSHTLPWFKRE
>NZ_CP009632.1|WP_045579745.1|682482_683106_+|recombinase-family-protein
MKVGYARVSTDEQDLALQIDALHDARCDALFTDQGVSGAVFDRPGLDSALATLQPGDALVVWRLDRLGRSLSKLVELIERLNKRGVEFISLMESINTQSSGGVLVFHVLAALAEFEKRLISERTRAGLAAARARGQRLGRRHSLDPGQRQRALEMLQTCSLTEVAREFDVHTRTLKRLVQEHTASTESAEPIAPIDPSGETGGDRES
>NZ_CP009632.1|WP_106919379.1|683149_684523_+|galactosyl-transferase-GMA12/MNN10-domain-protein
MPTCFVLSFLAEHSPTSVANHRAYADSRGYPHYVVDACDGPRGPQALALHKYQTLLDRLHVCANDDVVLLLTESALIVGDYPIEPLVAGRDELLVRTTETLPQVNLQIWRNGAASRERLARVVARCRLGGEPFPGEPALFADAAAHDWYQPLANICVVMNSSPNVDPAWARTPTLAISLGTAEQSPPELLAVPRFRRVLAEHIQSCRTTGRPFFHFEPPAQPDPDERSTYDAGQPIALVTLYTPEIARYGAIAEHNLRQYCARHGYTLYVHRGMPQEVGLSGTGNWIKPWLLHAYLQHHSWVVWVDADVLIHAPAQRLEPLLADRTVLLARDIGQWPFNSGVMGFAQIPANLELLALLMQRIASLADRSSVYAGNGDQHYFIQTMRELGLLDETAILSPRILNTPWFFAEPDSFLVHYYGMWPEMRTLMMDYDERRRLAAQPVRIGSLPCAPSLPSC
>NZ_CP009632.1|WP_052691596.1|684495_685908_+|S41-family-peptidase
MRAFVAFLLITAAGLARADGLPADVRRSLEQAFNLIKQDYAGRVDDATLMTAAIKGMVADLDPHSQFFERAEFAKLQEHLNGGFAGVGLQVGLSDGALRVAAPVDESPAAHAGIQAGDLVTRIDDVPTPGLTLENAVKHLRGEPGTRVRLALMRPSEDRSWTVVLTRAFIRTPSVTMARPAPGYGYVRISSFGEQTVPELADRLRTLAIAEPRLRGLVLDLRDNGGGVLQDAVGVASAFVPENTLVATVVDRNPEKSHAYRTTYADYRRPAYAADPLAGIAPRFKTVPLVVLTNAQSQSVTEVFAAALQDTKRAVVMGQPTFGKGTIQVTGGLSDGAGLMLTVARYYTPTGRSIQNRGVIPDIVVDEHRSGSPIGLPPLREVDLANRLPNPLDPDDDASRAAHEREVVAQLRAIETQRTRGTRIGNQADAPARNSKSGDALLRQALNWLRRNAAMQAADQSVMVTPRAIE
>NZ_CP009632.1|WP_106919380.1|686644_686881_-|energy-transducer-TonB
MDRLLRQAGAQDCGRRRVIARVLLDERGHVQDVVLKHSCGDSELDARALDALREQRYGVTRTGKRAVRRWQEVAYPVD
>NZ_CP009632.1|WP_080938782.1|687165_688008_-|recombinase-family-protein
MRIGYARVSTEEQNLDLQIDALRGSGCESIYSDQGISGAKINRPGLAEALRVLKAGDTLVVWKLDRLGRSIRDLISVMSDLNRSGIRFVSLTELIDTESSTGRFTFHMIAALAEFERALISERTRAGLEAARRRGSRLGRPKALQNNEIWHARELLAAHSESVVARSLQVHPRTLSRSLKIGEAQERGSEAPEEQKLDRHVNQMKCMQSDRLELYNGLQINNMICMECTGMLIPLGSMLFLSRRIGAKNHAVRDGAAKKPLSGVTVRMAANCVASKLGRP
>NZ_CP009632.1|WP_045579746.1|689717_690308_+|ATP-binding-protein
MRRAAFRTSKTLEQFDFDRLPQLNRARVHDLAGGRYLGEHAPVLIVGPCGTGKSHLAQALGHCAVRQGVDVLFTTCTQLTTSLNAARATGAYERRLASLMRVELLIIDDFGLKPLRPPADEDLHELIAERYEAASTIVTSNLDLTEWDQAFPANRLLASATLDRLRHNAYCLVLDGHSYQSPRHPPEHHLNLANAT
>NZ_CP009632.1|WP_045579747.1|690784_691558_-|AAA-family-ATPase
MNLQQERIDGHCQSLKLEGLMHRYVALASDAAAKQWSFLDFLENALAHERETRQVRSRQTLVRMAGFPAIKTLDDYDYSFAVGVPREAIDELATLRFIERGENAVLLGPSGVGKTHLAIAIGYAATQAGIKTKFITAADLMLQLEAARRQERYDAVLRHNILGPRLLIVDEIGYLPLSGDQASHFFQIVAKRYERGSMILTSNLPFAQWDETFGGNTTLTAAMLDRIPHHAHIIQIKGDSYRLKQQRKAGHVPTSKK

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Crispr_ID: NZ_CP009632_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009632_3

677318-677669

Orphan

Consensus_repeat	Method
GAGAGGCCCGTGGAGAGCGAACTCACGCCGGTCGACAGCGAGCTGGCCGTCGTCGACGTCGAGG	PILER-CR

3 spacers

The CRISPR arrays of NZ_CP009632_3

>merge|NZ_CP009632|3|677318-677669|PILER-CR
GAGAGGCCCGTGGAGAGCGAACTCACGCCGGTCGACAGCGAGCTGGCCGTCGTCGACGTCGAGGTCGACAACGACGCCACGTTGCTGTTTGTCGTGGAGAGGCCCGTGGAGAGCGAACTCACGCCGGTCGACAGCGAGCTGGCCGTCGTCGACGTGGAAGTCGACAGCGACGCCACATTGCTGTTCGTCGTGGAGAGGCCCGTGGAGAGCGAGCTCACGCCGGTCGACAGCGAGCTGGCCGTCGTCGACGTCGAGGTCGACAGCGACGCAACGTTGCTGTTTGTCGTGGAGAGGCCCGTCGAGAGCGAGCTCACGCCGGTCGACAGCGAGCTGGCCGTCGTCGACGTCGAGG

>NZ_CP009632|3|2|677318-677669|PILER-CR
GAGAGGCCCGTGGAGAGCGAACTCACGCCGGTCGACAGCGAGCTGGCCGTCGTCGACGTCGAGG	TCGACAACGACGCCACGTTGCTGTTTGTCGTG
GAGAGGCCCGTGGAGAGCGAACTCACGCCGGTCGACAGCGAGCTGGCCGTCGTCGACGTGGAAG	TCGACAGCGACGCCACATTGCTGTTCGTCGTGGAG
AGGCCCGTGGAGAGCGAGCTCACGCCGGTCGACAGCGAGCTGGCCGTCGTCGACGTCGAGGTCG	ACAGCGACGCAACGTTGCTGTTTGTCGTGGAG
AGGCCCGTCGAGAGCGAGCTCACGCCGGTCGACAGCGAGCTGGCCGTCGTCGACGTCGAGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009632.1\|WP_045579738.1\|666607_667750_-\|DUF2827-domain-containing-protein	unknown	unknown	gnl\|CDD\|371305
NZ_CP009632.1\|WP_059669413.1\|665041_665353_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009632.1\|WP_045579747.1\|690784_691558_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|181681
NZ_CP009632.1\|WP_045579740.1\|669487_670621_-\|DUF2827-domain-containing-protein	unknown	unknown	gnl\|CDD\|371305
NZ_CP009632.1\|WP_052691595.1\|681272_681980_-\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|376350
NZ_CP009632.1\|WP_144410691.1\|680754_681228_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009632.1\|WP_045579737.1\|665390_665738_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009632.1\|WP_106919380.1\|686644_686881_-\|energy-transducer-TonB	unknown	unknown	gnl\|CDD\|367555
NZ_CP009632.1\|WP_045579739.1\|668369_669491_-\|DUF2827-domain-containing-protein	unknown	unknown	gnl\|CDD\|371305
NZ_CP009632.1\|WP_080938782.1\|687165_688008_-\|recombinase-family-protein	unknown	unknown	gnl\|CDD\|239737
NZ_CP009632.1\|WP_045579741.1\|670809_671505_-\|OmpA-family-protein	unknown	unknown	gnl\|CDD\|143586
NZ_CP009632.1\|WP_144410690.1\|662771_663008_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009632.1\|WP_144410692.1\|682163_682382_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009632.1\|WP_045579746.1\|689717_690308_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|366760
NZ_CP009632.1\|WP_045579972.1\|667746_668361_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009632.1\|WP_052691590.1\|665751_666585_-\|peptidyl-prolyl-cis-trans-isomerase	unknown	unknown	gnl\|CDD\|131971
NZ_CP009632.1\|WP_045579745.1\|682482_683106_+\|recombinase-family-protein	unknown	unknown	gnl\|CDD\|239737
NZ_CP009632.1\|WP_106919390.1\|663128_664997_-\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP009632.1\|WP_106919379.1\|683149_684523_+\|galactosyl-transferase-GMA12/MNN10-domain-protein	unknown	unknown	gnl\|CDD\|368535
NZ_CP009632.1\|WP_052691596.1\|684495_685908_+\|S41-family-peptidase	unknown	unknown	gnl\|CDD\|223864

Protein	Function_ID	Function_description	E-value
NZ_CP009632.1\|WP_052691595.1\|681272_681980_-\|EAL-domain-containing-protein	gnl\|CDD\|376350	pfam00563, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues. The EAL domain is a good candidate for a diguanylate phosphodiesterase function. The domain contains many conserved acidic residues that could participate in metal binding and might form the phosphodiesterase active site.	1.54705e-24
NZ_CP009632.1\|WP_052691596.1\|684495_685908_+\|S41-family-peptidase	gnl\|CDD\|223864	COG0793, Prc, Periplasmic protease [Cell envelope biogenesis, outer membrane].	3.60891e-96
NZ_CP009632.1\|WP_045579738.1\|666607_667750_-\|DUF2827-domain-containing-protein	gnl\|CDD\|371305	pfam10933, DUF2827, Protein of unknown function (DUF2827). This is a family of uncharacterized proteins found in Burkholderia.	1.03576e-173
NZ_CP009632.1\|WP_106919380.1\|686644_686881_-\|energy-transducer-TonB	gnl\|CDD\|367555	pfam03544, TonB_C, Gram-negative bacterial TonB protein C-terminal. The TonB_C domain is the well-characterized C-terminal region of the TonB receptor molecule. This protein is bound to an inner membrane-bound protein ExbB via a globular domain and has a flexible middle region that is likely to help in positioning the C-terminal domain into the iron-transporter barrel in the outer membrane. TonB_C interacts with the N-terminal TonB box of the outer membrane transporter that binds the Fe3+-siderophore complex. The barrel of the transporter, consisting of 22 beta-sheets and an inside plug, binds the iron complex in the barrel entrance.	2.86078e-06
NZ_CP009632.1\|WP_045579739.1\|668369_669491_-\|DUF2827-domain-containing-protein	gnl\|CDD\|371305	pfam10933, DUF2827, Protein of unknown function (DUF2827). This is a family of uncharacterized proteins found in Burkholderia.	0
NZ_CP009632.1\|WP_080938782.1\|687165_688008_-\|recombinase-family-protein	gnl\|CDD\|239737	cd03768, SR_ResInv, Serine Recombinase (SR) family, Resolvase and Invertase subfamily, catalytic domain; members contain a C-terminal DNA binding domain. Serine recombinases catalyze site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and the enzyme. They are functionally versatile and include resolvases, invertases, integrases, and transposases. Resolvases and invertases affect resolution or inversion and comprise a major phylogenic group. Resolvases (e.g. Tn3, gamma-delta, and Tn5044) normally recombine two sites in direct repeat causing deletion of the DNA between the sites. Invertases (e.g. Gin and Hin) recombine sites in inverted repeat to invert the DNA between the sites. Cointegrate resolution with gamma-delta resolvase requires the formation of a synaptosome of three resolvase dimers bound to each of two res sites on the DNA. Also included in this subfamily are some putative integrases including a sequence from bacteriophage phi-FC1.	1.19409e-55
NZ_CP009632.1\|WP_045579741.1\|670809_671505_-\|OmpA-family-protein	gnl\|CDD\|143586	cd07185, OmpA_C-like, Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA. OmpA-like domains (named after the C-terminal domain of Escherichia coli OmpA protein) have been shown to non-covalently associate with peptidoglycan, a network of glycan chains composed of disaccharides, which are crosslinked via short peptide bridges. Well-studied members of this family include the Escherichia coli outer membrane protein OmpA, the Escherichia coli lipoprotein PAL, Neisseria meningitdis RmpM, which interact with the outer membrane, as well as the Escherichia coli motor protein MotB, and the Vibrio flagellar motor proteins PomB and MotY, which interact with the inner membrane.	1.05543e-40
NZ_CP009632.1\|WP_045579746.1\|689717_690308_+\|ATP-binding-protein	gnl\|CDD\|366760	pfam01695, IstB_IS21, IstB-like ATP binding protein. This protein contains an ATP/GTP binding P-loop motif. It is found associated with IS21 family insertion sequences. The function of this protein is unknown, but it may perform a transposase function.	1.1729e-54
NZ_CP009632.1\|WP_045579747.1\|690784_691558_-\|AAA-family-ATPase	gnl\|CDD\|181681	PRK09183, PRK09183, transposase/IS protein; Provisional.	4.82032e-148
NZ_CP009632.1\|WP_052691590.1\|665751_666585_-\|peptidyl-prolyl-cis-trans-isomerase	gnl\|CDD\|131971	TIGR02925, hypothetical_protein_Nmul_A0241, peptidyl-prolyl cis-trans isomerase, EpsD family. Members of this family belong to the peptidyl-prolyl cis-trans isomerase family and are found in loci associated with exopolysaccharide biosynthesis. All members are encoded near a homolog of EpsH, as detected by TIGR02602.	1.58123e-08
NZ_CP009632.1\|WP_045579745.1\|682482_683106_+\|recombinase-family-protein	gnl\|CDD\|239737	cd03768, SR_ResInv, Serine Recombinase (SR) family, Resolvase and Invertase subfamily, catalytic domain; members contain a C-terminal DNA binding domain. Serine recombinases catalyze site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and the enzyme. They are functionally versatile and include resolvases, invertases, integrases, and transposases. Resolvases and invertases affect resolution or inversion and comprise a major phylogenic group. Resolvases (e.g. Tn3, gamma-delta, and Tn5044) normally recombine two sites in direct repeat causing deletion of the DNA between the sites. Invertases (e.g. Gin and Hin) recombine sites in inverted repeat to invert the DNA between the sites. Cointegrate resolution with gamma-delta resolvase requires the formation of a synaptosome of three resolvase dimers bound to each of two res sites on the DNA. Also included in this subfamily are some putative integrases including a sequence from bacteriophage phi-FC1.	1.31421e-50
NZ_CP009632.1\|WP_106919390.1\|663128_664997_-\|tetratricopeptide-repeat-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	3.77308e-16
NZ_CP009632.1\|WP_106919379.1\|683149_684523_+\|galactosyl-transferase-GMA12/MNN10-domain-protein	gnl\|CDD\|368535	pfam05637, Glyco_transf_34, galactosyl transferase GMA12/MNN10 family. This family contains a number of glycosyltransferase enzymes that contain a DXD motif. This family includes a number of C. elegans homologs where the DXD is replaced by DXH. Some members of this family are included in glycosyltransferase family 34.	2.43454e-06
NZ_CP009632.1\|WP_045579740.1\|669487_670621_-\|DUF2827-domain-containing-protein	gnl\|CDD\|371305	pfam10933, DUF2827, Protein of unknown function (DUF2827). This is a family of uncharacterized proteins found in Burkholderia.	6.86669e-158

>NZ_CP009632.1|WP_045579741.1|670809_671505_-|OmpA-family-protein
MLQRTKVVLLSAAVLAGCSASGPTFNAYSLRLANGEQAYRVDCYGIFEGQGTCHKKAEEICGNQPVRALEDAAPLGSTSDGKPNTRILTFQCGVPSAPPPVVAPVPVPVPPPPPPPPAKVVLGGDANFDTAKWTLRPEARAKLDKLVSDASGATFALVTVKGYTDSRGSDAYNLNLSQHRAETVAAYLRDHGLQAQRYAAHGYGKADPVASNDTVEGRAKNRRVEIQLDQR
>NZ_CP009632.1|WP_045579740.1|669487_670621_-|DUF2827-domain-containing-protein
MRIGISILTHAGQNIWENGLGQNVFFLARLLRALPFVTDVVLLNCGDQTSVAANAQDGGQPLRLIPMREATECIDVAIEMGGGLDVEWLDYLRARGKRVVFFCCGQPYVGLIEPSVFKRSGYFTRANRCDAIWILSKDRDFAPMLRTLHRCPVIEVPYLWDPVFVEQRAAEIERAGLHFGYQARQEHERGLRVAIFEPNISVVKNCAIPLLVCEAAARAEPESVSRVHVLNSVQMQRHPTFEFLTRSLELARDNKLQLDQRHDFVGYMSQFANAVVSHQWHNDQNILYLDALYGDYPLIHNAPWIAELGYYYPDSDIEQGASQLVSAASDHDDQLSHYRHRSRAFLSALSSQTRANRIAYAQCLLHLVGRTAQEGAR
>NZ_CP009632.1|WP_045579739.1|668369_669491_-|DUF2827-domain-containing-protein
MSVTKRLKIGVTIFLRKGHQSIWENGIFQNCYFLAQLLQRSPLIDSVVLVNGGDGEPHEAQAFLEHSPAPVIDLETARMELDVVIELSAQLNPDWARAFCARGGHVIGMRVANDYVIDIERMMFDLPHGMLASGTPYSAIWTLPAFERSCASYYGAALRAPVRAMQHLWSPALLERTLASSGNEGFGYAPGRERWRLAILEPNICMVKTSHVPMLLADLAHRQDPSFIEHLRVFNTLHLKDDAQFAGFARSLDLVNHGRATFEPRVPIYEILNRQADAIVAHHWENAQNYVYYEALYGGYALIHNSAFLSGCGYRYADFDCEDGALALRRAFAEHDVDLVRYRDEARQFLATLDPLAESNVAQYGAAIAELYE
>NZ_CP009632.1|WP_045579972.1|667746_668361_-|hypothetical-protein
MKRHGLVRGVGPAIRASLVSAAVAASVLAHAQGLAGDGAATPTPTPTPPTSVVTTPATVLGRAAHAIGIRRCAGAIDAVASRAFVNAQRQDVVLDWDRSNPDGAPFFSLSGIEYRESSAILSLTTSPALQGGCTILAERISSAPLACREVARAELTGYQAAALVRGVTVYVDPHHSRETVTLVEAPPSCVIVRRQVQFSWGVSR
>NZ_CP009632.1|WP_045579738.1|666607_667750_-|DUF2827-domain-containing-protein
MNGQQQRQHPRALRIGITIGLHNEAESLWVNGIKQNALYLMRVFQHSPLKHAVCLVNTTQVAITPQLPWDLTQFPVKPFEAAKDDLDVLVELGGQINEAQCKYLQSRGARVVSYCCGPEYVQMMEAMIFRRRMTDQVFINQCYDQVWVIPQVMETSAHFFQTLRRKPVHQVPFVWDPMCLDARTVNLPNGGQYRPHAGPKRLSIMEPNIDVMKFCLYPLLIAEQAYRRVGAQIAHVHVTNADWLALGSPEFIGVMQYLDLVREHKASFVGRYETPQFLSELTDVVISHQWGLALNYYYFDVCWNGYALVHNAQLCAGLGYFYQGNDVEAGARQLVTALTRHDEQWQDYRTRQREVIGGFLATNPKVVAQYDQLLAGLFRG
>NZ_CP009632.1|WP_052691590.1|665751_666585_-|peptidyl-prolyl-cis-trans-isomerase
MAGWMLVGCLAAAMGRAAESSASAQVALPTGTVALVNDVPIVRGEVDDVLAKTHLPDSPEMREVAVRGLIGRELVRQAALGEGLDRAPTVAGLTGTTRVNAENRLYLERHLQVPAVTDAQVKSAYDAMVAEQGPREYQTRIIAVRDAASAAGVLEKLKAGVAFDEVARETSMDSTREAGGALPWVSFKTPPAEGKTMGVALPIAQEIARLQPGQVSSTPIAVAGQFVIVKLEASRPTQTPSYDVAAPGVRKFLEARGRNAAFERLVAGLAEHARIVR
>NZ_CP009632.1|WP_045579737.1|665390_665738_-|hypothetical-protein
MRSFDSTDRFVANVFGAGAMTCAMTMMVGLLEMVWPTMNRISGWQRLALTTVVTVAFVTLVYAMATGLAYRTRKRSWLHRDSGARRAARQGRVVGIVAGLLMGNAFVLWWGSPLP
>NZ_CP009632.1|WP_059669413.1|665041_665353_-|hypothetical-protein
MTDYTDRFVGNTLIGIALTIAIVVVGMGLLDDLAGHWIARAWTQFGVTFVVAGGLLFTQPLVSRRLHRHEVLSSPVDAAVWLGRSVGWLVGALMGAVLASQFN
>NZ_CP009632.1|WP_106919390.1|663128_664997_-|tetratricopeptide-repeat-protein
MESLTQVEDLLETGDLLGAQRALNHYRPRNDDAQAYTLMSQLLRLRGRADQARALLDVYCVHYPSTRAMEIERARVALSLGDLKAADEAFAHASVEDAFDEDWVQEWIEVSSQLGHHANAIRLALMRCQHKPGEATRWFALGLVYQRARMHQQAMDAYAEVAQRDPHAPMLHNNIGAAHLELKAYASAQHELGLALRLDPGNALAWTNLATAALKQGKLDDALVAVERACALAPNYPTALQTYSYVLKECQQWQAALHVAQRALSLEPSNASMMWSVAMLELLLGDYSNGWLHHEARWAGSPELRDVAPNLPMPRWQGEPLAGKTLFVWGEQGHGDVFQFVRFVPALAERVEREGGSLIYSGFQHLQTLLARSLHGVVDTVVPHDQAELPRADFHLPLASIPFMQGITPEQLPVRTNYLRANPAKLDAWRRRLQKASSALKVGLVWSGSRSHQRNALRSVPPQALAQVFASAQAIEWFSLQLDAAEDVAALRAGGMTLVDVSEELHSFDDTAAIIANLDLVITVCTSVAHLAAAMGRPTWVLLDVNPHWVWMTERRDSPWYPSVTLYRQADYGDWTPVLEQVVKDLSALAVKRGPVPDYSPKRTSKGNSNDASTTRRAREST
>NZ_CP009632.1|WP_144410690.1|662771_663008_-|hypothetical-protein
MSARDSRARCNIRHIARAWCDRMVRAARRLSTSRQLGLGVLLGFALGLIAMLVIVLQSAEPPVPRVVASPRGAAVRWR
>NZ_CP009632.1|WP_144410691.1|680754_681228_-|hypothetical-protein
MSAMARPTKWKPIPGKELNLAGEAGGAVLQALSDCLGRCGESAPSMDRAEDWLEGLRRCAHLLVALHLPEWVSQATQAYDAGLAQGFYGTASAIGVGMEECLPGTGSGNSHVPLREPESSGHSDDQTIENQVRELTKSLRVLGREHGDELRRWLGLG
>NZ_CP009632.1|WP_052691595.1|681272_681980_-|EAL-domain-containing-protein
MTDMRVAEQIWDAMRTHRIQLHFSRIHRADDPNDVLYRECLARIPVADGQWRAASALLPALTRLNLVSTFERYVLRRVIQFLRDHPDEIVGVNFQCDGFDSAWTAALLELEVETDVAKRLIVEVPETSHVSREFVQFIRRAGCRIAIDGYGVAYGMRADIAIGHPDIVKFDPSLLTEARQADAGLEQLSRLIRLASDVATEAVVLTGVRGPQDLSVAARAGAPWVQPARDEPGAP
>NZ_CP009632.1|WP_144410692.1|682163_682382_+|hypothetical-protein
MKDKNDRLCPVEFGRDSNSFTILNSRLLWIKLFRCFADDGACNALHVAGVQAAIDIRLIWPSSHTLPWFKRE
>NZ_CP009632.1|WP_045579745.1|682482_683106_+|recombinase-family-protein
MKVGYARVSTDEQDLALQIDALHDARCDALFTDQGVSGAVFDRPGLDSALATLQPGDALVVWRLDRLGRSLSKLVELIERLNKRGVEFISLMESINTQSSGGVLVFHVLAALAEFEKRLISERTRAGLAAARARGQRLGRRHSLDPGQRQRALEMLQTCSLTEVAREFDVHTRTLKRLVQEHTASTESAEPIAPIDPSGETGGDRES
>NZ_CP009632.1|WP_106919379.1|683149_684523_+|galactosyl-transferase-GMA12/MNN10-domain-protein
MPTCFVLSFLAEHSPTSVANHRAYADSRGYPHYVVDACDGPRGPQALALHKYQTLLDRLHVCANDDVVLLLTESALIVGDYPIEPLVAGRDELLVRTTETLPQVNLQIWRNGAASRERLARVVARCRLGGEPFPGEPALFADAAAHDWYQPLANICVVMNSSPNVDPAWARTPTLAISLGTAEQSPPELLAVPRFRRVLAEHIQSCRTTGRPFFHFEPPAQPDPDERSTYDAGQPIALVTLYTPEIARYGAIAEHNLRQYCARHGYTLYVHRGMPQEVGLSGTGNWIKPWLLHAYLQHHSWVVWVDADVLIHAPAQRLEPLLADRTVLLARDIGQWPFNSGVMGFAQIPANLELLALLMQRIASLADRSSVYAGNGDQHYFIQTMRELGLLDETAILSPRILNTPWFFAEPDSFLVHYYGMWPEMRTLMMDYDERRRLAAQPVRIGSLPCAPSLPSC
>NZ_CP009632.1|WP_052691596.1|684495_685908_+|S41-family-peptidase
MRAFVAFLLITAAGLARADGLPADVRRSLEQAFNLIKQDYAGRVDDATLMTAAIKGMVADLDPHSQFFERAEFAKLQEHLNGGFAGVGLQVGLSDGALRVAAPVDESPAAHAGIQAGDLVTRIDDVPTPGLTLENAVKHLRGEPGTRVRLALMRPSEDRSWTVVLTRAFIRTPSVTMARPAPGYGYVRISSFGEQTVPELADRLRTLAIAEPRLRGLVLDLRDNGGGVLQDAVGVASAFVPENTLVATVVDRNPEKSHAYRTTYADYRRPAYAADPLAGIAPRFKTVPLVVLTNAQSQSVTEVFAAALQDTKRAVVMGQPTFGKGTIQVTGGLSDGAGLMLTVARYYTPTGRSIQNRGVIPDIVVDEHRSGSPIGLPPLREVDLANRLPNPLDPDDDASRAAHEREVVAQLRAIETQRTRGTRIGNQADAPARNSKSGDALLRQALNWLRRNAAMQAADQSVMVTPRAIE
>NZ_CP009632.1|WP_106919380.1|686644_686881_-|energy-transducer-TonB
MDRLLRQAGAQDCGRRRVIARVLLDERGHVQDVVLKHSCGDSELDARALDALREQRYGVTRTGKRAVRRWQEVAYPVD
>NZ_CP009632.1|WP_080938782.1|687165_688008_-|recombinase-family-protein
MRIGYARVSTEEQNLDLQIDALRGSGCESIYSDQGISGAKINRPGLAEALRVLKAGDTLVVWKLDRLGRSIRDLISVMSDLNRSGIRFVSLTELIDTESSTGRFTFHMIAALAEFERALISERTRAGLEAARRRGSRLGRPKALQNNEIWHARELLAAHSESVVARSLQVHPRTLSRSLKIGEAQERGSEAPEEQKLDRHVNQMKCMQSDRLELYNGLQINNMICMECTGMLIPLGSMLFLSRRIGAKNHAVRDGAAKKPLSGVTVRMAANCVASKLGRP
>NZ_CP009632.1|WP_045579746.1|689717_690308_+|ATP-binding-protein
MRRAAFRTSKTLEQFDFDRLPQLNRARVHDLAGGRYLGEHAPVLIVGPCGTGKSHLAQALGHCAVRQGVDVLFTTCTQLTTSLNAARATGAYERRLASLMRVELLIIDDFGLKPLRPPADEDLHELIAERYEAASTIVTSNLDLTEWDQAFPANRLLASATLDRLRHNAYCLVLDGHSYQSPRHPPEHHLNLANAT
>NZ_CP009632.1|WP_045579747.1|690784_691558_-|AAA-family-ATPase
MNLQQERIDGHCQSLKLEGLMHRYVALASDAAAKQWSFLDFLENALAHERETRQVRSRQTLVRMAGFPAIKTLDDYDYSFAVGVPREAIDELATLRFIERGENAVLLGPSGVGKTHLAIAIGYAATQAGIKTKFITAADLMLQLEAARRQERYDAVLRHNILGPRLLIVDEIGYLPLSGDQASHFFQIVAKRYERGSMILTSNLPFAQWDETFGGNTTLTAAMLDRIPHHAHIIQIKGDSYRLKQQRKAGHVPTSKK

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP009632_2	2.2\|675849\|35\|NZ_CP009632\|PILER-CR	675849-675883	35	NZ_CP009632.1	675078-675112	0	1.0
NZ_CP009632_2	2.2\|675849\|35\|NZ_CP009632\|PILER-CR	675849-675883	35	NZ_CP009632.1	675366-675400	0	1.0
NZ_CP009632_3	3.2\|677478\|35\|NZ_CP009632\|PILER-CR	677478-677512	35	NZ_CP009632.1	675078-675112	0	1.0
NZ_CP009632_3	3.2\|677478\|35\|NZ_CP009632\|PILER-CR	677478-677512	35	NZ_CP009632.1	675366-675400	0	1.0
NZ_CP009632_2	2.2\|675849\|35\|NZ_CP009632\|PILER-CR	675849-675883	35	NZ_CP009632.1	678720-678754	1	0.971
NZ_CP009632_3	3.2\|677478\|35\|NZ_CP009632\|PILER-CR	677478-677512	35	NZ_CP009632.1	678720-678754	1	0.971
NZ_CP009632_2	2.1\|675753\|32\|NZ_CP009632\|PILER-CR	675753-675784	32	NZ_CP009632.1	677190-677221	2	0.938
NZ_CP009632_2	2.3\|675948\|32\|NZ_CP009632\|PILER-CR	675948-675979	32	NZ_CP009632.1	677190-677221	2	0.938
NZ_CP009632_3	3.1\|677382\|32\|NZ_CP009632\|PILER-CR	677382-677413	32	NZ_CP009632.1	677190-677221	2	0.938
NZ_CP009632_3	3.3\|677577\|32\|NZ_CP009632\|PILER-CR	677577-677608	32	NZ_CP009632.1	677190-677221	2	0.938

1. spacer 2.2|675849|35|NZ_CP009632|PILER-CR matches to position: 675078-675112, mismatch: 0, identity: 1.0

aagtcgacagcgacgccacattgctgttcgtcgtg	CRISPR spacer
aagtcgacagcgacgccacattgctgttcgtcgtg	Protospacer
***********************************

2. spacer 2.2|675849|35|NZ_CP009632|PILER-CR matches to position: 675366-675400, mismatch: 0, identity: 1.0

aagtcgacagcgacgccacattgctgttcgtcgtg	CRISPR spacer
aagtcgacagcgacgccacattgctgttcgtcgtg	Protospacer
***********************************

3. spacer 3.2|677478|35|NZ_CP009632|PILER-CR matches to position: 675078-675112, mismatch: 0, identity: 1.0

aagtcgacagcgacgccacattgctgttcgtcgtg	CRISPR spacer
aagtcgacagcgacgccacattgctgttcgtcgtg	Protospacer
***********************************

4. spacer 3.2|677478|35|NZ_CP009632|PILER-CR matches to position: 675366-675400, mismatch: 0, identity: 1.0

aagtcgacagcgacgccacattgctgttcgtcgtg	CRISPR spacer
aagtcgacagcgacgccacattgctgttcgtcgtg	Protospacer
***********************************

5. spacer 2.2|675849|35|NZ_CP009632|PILER-CR matches to position: 678720-678754, mismatch: 1, identity: 0.971

aagtcgacagcgacgccacattgctgttcgtcgtg	CRISPR spacer
aagtcgacagcgacaccacattgctgttcgtcgtg	Protospacer
**************.********************

6. spacer 3.2|677478|35|NZ_CP009632|PILER-CR matches to position: 678720-678754, mismatch: 1, identity: 0.971

aagtcgacagcgacgccacattgctgttcgtcgtg	CRISPR spacer
aagtcgacagcgacaccacattgctgttcgtcgtg	Protospacer
**************.********************

7. spacer 2.1|675753|32|NZ_CP009632|PILER-CR matches to position: 677190-677221, mismatch: 2, identity: 0.938

tcgacaacgacgccacgttgctgtttgtcgtg	CRISPR spacer
tcgacaacgacgcaacgttgctgttcgtcgtg	Protospacer
************* ***********.******

8. spacer 2.3|675948|32|NZ_CP009632|PILER-CR matches to position: 677190-677221, mismatch: 2, identity: 0.938

tcgacagcgacgcaacgttgctgtttgtcgtg	CRISPR spacer
tcgacaacgacgcaacgttgctgttcgtcgtg	Protospacer
******.******************.******

9. spacer 3.1|677382|32|NZ_CP009632|PILER-CR matches to position: 677190-677221, mismatch: 2, identity: 0.938

tcgacaacgacgccacgttgctgtttgtcgtg	CRISPR spacer
tcgacaacgacgcaacgttgctgttcgtcgtg	Protospacer
************* ***********.******

10. spacer 3.3|677577|32|NZ_CP009632|PILER-CR matches to position: 677190-677221, mismatch: 2, identity: 0.938

tcgacagcgacgcaacgttgctgtttgtcgtg	CRISPR spacer
tcgacaacgacgcaacgttgctgttcgtcgtg	Protospacer
******.******************.******

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP009632_2	2.1\|675753\|32\|NZ_CP009632\|PILER-CR	675753-675784	32	NC_015382	Burkholderia gladioli BSR3 plasmid bgla_1p, complete sequence	15212-15243	2	0.938
NZ_CP009632_2	2.1\|675753\|32\|NZ_CP009632\|PILER-CR	675753-675784	32	NC_010553	Burkholderia ambifaria MC40-6 plasmid pBMC401, complete sequence	75904-75935	2	0.938
NZ_CP009632_2	2.3\|675948\|32\|NZ_CP009632\|PILER-CR	675948-675979	32	NC_010553	Burkholderia ambifaria MC40-6 plasmid pBMC401, complete sequence	75904-75935	2	0.938
NZ_CP009632_2	2.3\|675948\|32\|NZ_CP009632\|PILER-CR	675948-675979	32	NZ_CP013412	Burkholderia thailandensis strain 2002721643 plasmid p2002721643, complete sequence	115791-115822	2	0.938
NZ_CP009632_2	2.3\|675948\|32\|NZ_CP009632\|PILER-CR	675948-675979	32	NZ_CP010016	Burkholderia thailandensis 34 plasmid unnamed, complete sequence	6913-6944	2	0.938
NZ_CP009632_3	3.1\|677382\|32\|NZ_CP009632\|PILER-CR	677382-677413	32	NC_015382	Burkholderia gladioli BSR3 plasmid bgla_1p, complete sequence	15212-15243	2	0.938
NZ_CP009632_3	3.1\|677382\|32\|NZ_CP009632\|PILER-CR	677382-677413	32	NC_010553	Burkholderia ambifaria MC40-6 plasmid pBMC401, complete sequence	75904-75935	2	0.938
NZ_CP009632_3	3.3\|677577\|32\|NZ_CP009632\|PILER-CR	677577-677608	32	NC_010553	Burkholderia ambifaria MC40-6 plasmid pBMC401, complete sequence	75904-75935	2	0.938
NZ_CP009632_3	3.3\|677577\|32\|NZ_CP009632\|PILER-CR	677577-677608	32	NZ_CP013412	Burkholderia thailandensis strain 2002721643 plasmid p2002721643, complete sequence	115791-115822	2	0.938
NZ_CP009632_3	3.3\|677577\|32\|NZ_CP009632\|PILER-CR	677577-677608	32	NZ_CP010016	Burkholderia thailandensis 34 plasmid unnamed, complete sequence	6913-6944	2	0.938
NZ_CP009632_2	2.2\|675849\|35\|NZ_CP009632\|PILER-CR	675849-675883	35	NC_010553	Burkholderia ambifaria MC40-6 plasmid pBMC401, complete sequence	75901-75935	3	0.914
NZ_CP009632_3	3.2\|677478\|35\|NZ_CP009632\|PILER-CR	677478-677512	35	NC_010553	Burkholderia ambifaria MC40-6 plasmid pBMC401, complete sequence	75901-75935	3	0.914
NZ_CP009632_2	2.1\|675753\|32\|NZ_CP009632\|PILER-CR	675753-675784	32	NZ_CP052134	Burkholderia glumae strain HN plasmid pbghn2, complete sequence	95947-95978	4	0.875
NZ_CP009632_2	2.1\|675753\|32\|NZ_CP009632\|PILER-CR	675753-675784	32	NZ_CP045089	Burkholderia glumae strain GX plasmid pWSGX1, complete sequence	73870-73901	4	0.875
NZ_CP009632_3	3.1\|677382\|32\|NZ_CP009632\|PILER-CR	677382-677413	32	NZ_CP052134	Burkholderia glumae strain HN plasmid pbghn2, complete sequence	95947-95978	4	0.875
NZ_CP009632_3	3.1\|677382\|32\|NZ_CP009632\|PILER-CR	677382-677413	32	NZ_CP045089	Burkholderia glumae strain GX plasmid pWSGX1, complete sequence	73870-73901	4	0.875
NZ_CP009632_2	2.1\|675753\|32\|NZ_CP009632\|PILER-CR	675753-675784	32	NZ_CP050106	Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b5, complete sequence	151975-152006	8	0.75
NZ_CP009632_2	2.1\|675753\|32\|NZ_CP009632\|PILER-CR	675753-675784	32	NZ_CP020883	Xanthomonas citri pv. citri strain TX160042 plasmid unnamed1, complete sequence	105845-105876	8	0.75
NZ_CP009632_2	2.1\|675753\|32\|NZ_CP009632\|PILER-CR	675753-675784	32	NZ_CP020886	Xanthomonas citri pv. citri strain TX160149 plasmid unnamed1, complete sequence	69518-69549	8	0.75
NZ_CP009632_2	2.1\|675753\|32\|NZ_CP009632\|PILER-CR	675753-675784	32	NZ_CP050111	Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b1, complete sequence	152159-152190	8	0.75
NZ_CP009632_2	2.1\|675753\|32\|NZ_CP009632\|PILER-CR	675753-675784	32	NZ_CP021016	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6991 plasmid pF, complete sequence	24124-24155	8	0.75
NZ_CP009632_2	2.1\|675753\|32\|NZ_CP009632\|PILER-CR	675753-675784	32	NZ_CP020890	Xanthomonas citri pv. citri strain TX160197 plasmid unnamed1, complete sequence	20655-20686	8	0.75
NZ_CP009632_3	3.1\|677382\|32\|NZ_CP009632\|PILER-CR	677382-677413	32	NZ_CP050106	Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b5, complete sequence	151975-152006	8	0.75
NZ_CP009632_3	3.1\|677382\|32\|NZ_CP009632\|PILER-CR	677382-677413	32	NZ_CP020883	Xanthomonas citri pv. citri strain TX160042 plasmid unnamed1, complete sequence	105845-105876	8	0.75
NZ_CP009632_3	3.1\|677382\|32\|NZ_CP009632\|PILER-CR	677382-677413	32	NZ_CP020886	Xanthomonas citri pv. citri strain TX160149 plasmid unnamed1, complete sequence	69518-69549	8	0.75
NZ_CP009632_3	3.1\|677382\|32\|NZ_CP009632\|PILER-CR	677382-677413	32	NZ_CP050111	Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b1, complete sequence	152159-152190	8	0.75
NZ_CP009632_3	3.1\|677382\|32\|NZ_CP009632\|PILER-CR	677382-677413	32	NZ_CP021016	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6991 plasmid pF, complete sequence	24124-24155	8	0.75
NZ_CP009632_3	3.1\|677382\|32\|NZ_CP009632\|PILER-CR	677382-677413	32	NZ_CP020890	Xanthomonas citri pv. citri strain TX160197 plasmid unnamed1, complete sequence	20655-20686	8	0.75
NZ_CP009632_2	2.1\|675753\|32\|NZ_CP009632\|PILER-CR	675753-675784	32	NZ_CP035572	Lactobacillus plantarum strain SRCM103303 plasmid unnamed1	5213-5244	10	0.688
NZ_CP009632_2	2.1\|675753\|32\|NZ_CP009632\|PILER-CR	675753-675784	32	NZ_CP021931	Lactobacillus plantarum strain TMW 1.1308 plasmid pL11308-1, complete sequence	45731-45762	10	0.688
NZ_CP009632_2	2.1\|675753\|32\|NZ_CP009632\|PILER-CR	675753-675784	32	NZ_CP035570	Lactobacillus plantarum strain SRCM103300 plasmid unnamed4	824-855	10	0.688
NZ_CP009632_2	2.1\|675753\|32\|NZ_CP009632\|PILER-CR	675753-675784	32	NC_013449	Streptomyces sp. W9 plasmid pCQ3, complete sequence	53865-53896	10	0.688
NZ_CP009632_2	2.1\|675753\|32\|NZ_CP009632\|PILER-CR	675753-675784	32	NZ_CP013150	Lactobacillus plantarum strain MF1298 plasmid pMF1298-1, complete sequence	60828-60859	10	0.688
NZ_CP009632_2	2.1\|675753\|32\|NZ_CP009632\|PILER-CR	675753-675784	32	NZ_CP050806	Lactobacillus plantarum strain SPC-SNU 72-2 plasmid pLBP752, complete sequence	757-788	10	0.688
NZ_CP009632_2	2.3\|675948\|32\|NZ_CP009632\|PILER-CR	675948-675979	32	NC_013449	Streptomyces sp. W9 plasmid pCQ3, complete sequence	53865-53896	10	0.688
NZ_CP009632_3	3.1\|677382\|32\|NZ_CP009632\|PILER-CR	677382-677413	32	NZ_CP035572	Lactobacillus plantarum strain SRCM103303 plasmid unnamed1	5213-5244	10	0.688
NZ_CP009632_3	3.1\|677382\|32\|NZ_CP009632\|PILER-CR	677382-677413	32	NZ_CP021931	Lactobacillus plantarum strain TMW 1.1308 plasmid pL11308-1, complete sequence	45731-45762	10	0.688
NZ_CP009632_3	3.1\|677382\|32\|NZ_CP009632\|PILER-CR	677382-677413	32	NZ_CP035570	Lactobacillus plantarum strain SRCM103300 plasmid unnamed4	824-855	10	0.688
NZ_CP009632_3	3.1\|677382\|32\|NZ_CP009632\|PILER-CR	677382-677413	32	NC_013449	Streptomyces sp. W9 plasmid pCQ3, complete sequence	53865-53896	10	0.688
NZ_CP009632_3	3.1\|677382\|32\|NZ_CP009632\|PILER-CR	677382-677413	32	NZ_CP013150	Lactobacillus plantarum strain MF1298 plasmid pMF1298-1, complete sequence	60828-60859	10	0.688
NZ_CP009632_3	3.1\|677382\|32\|NZ_CP009632\|PILER-CR	677382-677413	32	NZ_CP050806	Lactobacillus plantarum strain SPC-SNU 72-2 plasmid pLBP752, complete sequence	757-788	10	0.688
NZ_CP009632_3	3.3\|677577\|32\|NZ_CP009632\|PILER-CR	677577-677608	32	NC_013449	Streptomyces sp. W9 plasmid pCQ3, complete sequence	53865-53896	10	0.688
NZ_CP009632_2	2.1\|675753\|32\|NZ_CP009632\|PILER-CR	675753-675784	32	NZ_CP035557	Lactobacillus plantarum strain SRCM103297 plasmid unnamed1	18396-18427	11	0.656
NZ_CP009632_2	2.1\|675753\|32\|NZ_CP009632\|PILER-CR	675753-675784	32	NZ_CP035557	Lactobacillus plantarum strain SRCM103297 plasmid unnamed1	60709-60740	11	0.656
NZ_CP009632_2	2.1\|675753\|32\|NZ_CP009632\|PILER-CR	675753-675784	32	NZ_CP028242	Lactobacillus plantarum strain SRCM101518 plasmid unnamed1, complete sequence	21395-21426	11	0.656
NZ_CP009632_3	3.1\|677382\|32\|NZ_CP009632\|PILER-CR	677382-677413	32	NZ_CP035557	Lactobacillus plantarum strain SRCM103297 plasmid unnamed1	18396-18427	11	0.656
NZ_CP009632_3	3.1\|677382\|32\|NZ_CP009632\|PILER-CR	677382-677413	32	NZ_CP035557	Lactobacillus plantarum strain SRCM103297 plasmid unnamed1	60709-60740	11	0.656
NZ_CP009632_3	3.1\|677382\|32\|NZ_CP009632\|PILER-CR	677382-677413	32	NZ_CP028242	Lactobacillus plantarum strain SRCM101518 plasmid unnamed1, complete sequence	21395-21426	11	0.656

1. spacer 2.1|675753|32|NZ_CP009632|PILER-CR matches to NC_015382 (Burkholderia gladioli BSR3 plasmid bgla_1p, complete sequence) position: , mismatch: 2, identity: 0.938

tcgacaacgacgccacgttgctgtttgtcgtg	CRISPR spacer
tggacaacgacgccacgttgctgttcgtcgtg	Protospacer
* ***********************.******

2. spacer 2.1|675753|32|NZ_CP009632|PILER-CR matches to NC_010553 (Burkholderia ambifaria MC40-6 plasmid pBMC401, complete sequence) position: , mismatch: 2, identity: 0.938

tcgacaacgacgccacgttgctgtttgtcgtg	CRISPR spacer
tcgacagcgacgccacgttgctgttcgtcgtg	Protospacer
******.******************.******

3. spacer 2.3|675948|32|NZ_CP009632|PILER-CR matches to NC_010553 (Burkholderia ambifaria MC40-6 plasmid pBMC401, complete sequence) position: , mismatch: 2, identity: 0.938

tcgacagcgacgcaacgttgctgtttgtcgtg	CRISPR spacer
tcgacagcgacgccacgttgctgttcgtcgtg	Protospacer
************* ***********.******

4. spacer 2.3|675948|32|NZ_CP009632|PILER-CR matches to NZ_CP013412 (Burkholderia thailandensis strain 2002721643 plasmid p2002721643, complete sequence) position: , mismatch: 2, identity: 0.938

tcgacagcgacgcaacgttgctgtttgtcgtg	CRISPR spacer
tcgacagcgacgcgacgttgctgttggtcgtg	Protospacer
*************.*********** ******

5. spacer 2.3|675948|32|NZ_CP009632|PILER-CR matches to NZ_CP010016 (Burkholderia thailandensis 34 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.938

tcgacagcgacgcaacgttgctgtttgtcgtg	CRISPR spacer
tcgacagcgacgcgacgttgctgttggtcgtg	Protospacer
*************.*********** ******

6. spacer 3.1|677382|32|NZ_CP009632|PILER-CR matches to NC_015382 (Burkholderia gladioli BSR3 plasmid bgla_1p, complete sequence) position: , mismatch: 2, identity: 0.938

tcgacaacgacgccacgttgctgtttgtcgtg	CRISPR spacer
tggacaacgacgccacgttgctgttcgtcgtg	Protospacer
* ***********************.******

7. spacer 3.1|677382|32|NZ_CP009632|PILER-CR matches to NC_010553 (Burkholderia ambifaria MC40-6 plasmid pBMC401, complete sequence) position: , mismatch: 2, identity: 0.938

tcgacaacgacgccacgttgctgtttgtcgtg	CRISPR spacer
tcgacagcgacgccacgttgctgttcgtcgtg	Protospacer
******.******************.******

8. spacer 3.3|677577|32|NZ_CP009632|PILER-CR matches to NC_010553 (Burkholderia ambifaria MC40-6 plasmid pBMC401, complete sequence) position: , mismatch: 2, identity: 0.938

tcgacagcgacgcaacgttgctgtttgtcgtg	CRISPR spacer
tcgacagcgacgccacgttgctgttcgtcgtg	Protospacer
************* ***********.******

9. spacer 3.3|677577|32|NZ_CP009632|PILER-CR matches to NZ_CP013412 (Burkholderia thailandensis strain 2002721643 plasmid p2002721643, complete sequence) position: , mismatch: 2, identity: 0.938

tcgacagcgacgcaacgttgctgtttgtcgtg	CRISPR spacer
tcgacagcgacgcgacgttgctgttggtcgtg	Protospacer
*************.*********** ******

10. spacer 3.3|677577|32|NZ_CP009632|PILER-CR matches to NZ_CP010016 (Burkholderia thailandensis 34 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.938

tcgacagcgacgcaacgttgctgtttgtcgtg	CRISPR spacer
tcgacagcgacgcgacgttgctgttggtcgtg	Protospacer
*************.*********** ******

11. spacer 2.2|675849|35|NZ_CP009632|PILER-CR matches to NC_010553 (Burkholderia ambifaria MC40-6 plasmid pBMC401, complete sequence) position: , mismatch: 3, identity: 0.914

aagtcgacagcgacgccacattgctgttcgtcgtg	CRISPR spacer
cggtcgacagcgacgccacgttgctgttcgtcgtg	Protospacer
 .*****************.***************

12. spacer 3.2|677478|35|NZ_CP009632|PILER-CR matches to NC_010553 (Burkholderia ambifaria MC40-6 plasmid pBMC401, complete sequence) position: , mismatch: 3, identity: 0.914

aagtcgacagcgacgccacattgctgttcgtcgtg	CRISPR spacer
cggtcgacagcgacgccacgttgctgttcgtcgtg	Protospacer
 .*****************.***************

13. spacer 2.1|675753|32|NZ_CP009632|PILER-CR matches to NZ_CP052134 (Burkholderia glumae strain HN plasmid pbghn2, complete sequence) position: , mismatch: 4, identity: 0.875

tcgacaacgacgccacgttgctgtttgtcgtg	CRISPR spacer
tcgacaacgacgccacgttgctgctcgtgttg	Protospacer
***********************.*.**  **

14. spacer 2.1|675753|32|NZ_CP009632|PILER-CR matches to NZ_CP045089 (Burkholderia glumae strain GX plasmid pWSGX1, complete sequence) position: , mismatch: 4, identity: 0.875

tcgacaacgacgccacgttgctgtttgtcgtg	CRISPR spacer
tcgacaacgacgccacgttgctgctcgtgttg	Protospacer
***********************.*.**  **

15. spacer 3.1|677382|32|NZ_CP009632|PILER-CR matches to NZ_CP052134 (Burkholderia glumae strain HN plasmid pbghn2, complete sequence) position: , mismatch: 4, identity: 0.875

tcgacaacgacgccacgttgctgtttgtcgtg	CRISPR spacer
tcgacaacgacgccacgttgctgctcgtgttg	Protospacer
***********************.*.**  **

16. spacer 3.1|677382|32|NZ_CP009632|PILER-CR matches to NZ_CP045089 (Burkholderia glumae strain GX plasmid pWSGX1, complete sequence) position: , mismatch: 4, identity: 0.875

tcgacaacgacgccacgttgctgtttgtcgtg	CRISPR spacer
tcgacaacgacgccacgttgctgctcgtgttg	Protospacer
***********************.*.**  **

17. spacer 2.1|675753|32|NZ_CP009632|PILER-CR matches to NZ_CP050106 (Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b5, complete sequence) position: , mismatch: 8, identity: 0.75

tcgacaacgacgccacgttgctgtttgtcgtg	CRISPR spacer
tcgaccacgacgccacggtgctgacttacctc	Protospacer
***** *********** ***** .*  * *

18. spacer 2.1|675753|32|NZ_CP009632|PILER-CR matches to NZ_CP020883 (Xanthomonas citri pv. citri strain TX160042 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

tcgacaacgacgccacgttgctgt-ttgtcgtg	CRISPR spacer
gcgacgacgacgccacgatgctgtaccggcgg-	Protospacer
 ****.*********** ****** ..* **

19. spacer 2.1|675753|32|NZ_CP009632|PILER-CR matches to NZ_CP020886 (Xanthomonas citri pv. citri strain TX160149 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

tcgacaacgacgccacgttgctgt-ttgtcgtg	CRISPR spacer
gcgacgacgacgccacgatgctgtaccggcgg-	Protospacer
 ****.*********** ****** ..* **

20. spacer 2.1|675753|32|NZ_CP009632|PILER-CR matches to NZ_CP050111 (Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b1, complete sequence) position: , mismatch: 8, identity: 0.75

tcgacaacgacgccacgttgctgtttgtcgtg	CRISPR spacer
tcgaccacgacgccacggtgctgacttacctc	Protospacer
***** *********** ***** .*  * *

21. spacer 2.1|675753|32|NZ_CP009632|PILER-CR matches to NZ_CP021016 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6991 plasmid pF, complete sequence) position: , mismatch: 8, identity: 0.75

tcgacaacgacgccacgttgctgt-ttgtcgtg	CRISPR spacer
gcgacgacgacgccacgatgctgtaccggcgg-	Protospacer
 ****.*********** ****** ..* **

22. spacer 2.1|675753|32|NZ_CP009632|PILER-CR matches to NZ_CP020890 (Xanthomonas citri pv. citri strain TX160197 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

tcgacaacgacgccacgttgctgt-ttgtcgtg	CRISPR spacer
gcgacgacgacgccacgatgctgtaccggcgg-	Protospacer
 ****.*********** ****** ..* **

23. spacer 3.1|677382|32|NZ_CP009632|PILER-CR matches to NZ_CP050106 (Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b5, complete sequence) position: , mismatch: 8, identity: 0.75

tcgacaacgacgccacgttgctgtttgtcgtg	CRISPR spacer
tcgaccacgacgccacggtgctgacttacctc	Protospacer
***** *********** ***** .*  * *

24. spacer 3.1|677382|32|NZ_CP009632|PILER-CR matches to NZ_CP020883 (Xanthomonas citri pv. citri strain TX160042 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

tcgacaacgacgccacgttgctgt-ttgtcgtg	CRISPR spacer
gcgacgacgacgccacgatgctgtaccggcgg-	Protospacer
 ****.*********** ****** ..* **

25. spacer 3.1|677382|32|NZ_CP009632|PILER-CR matches to NZ_CP020886 (Xanthomonas citri pv. citri strain TX160149 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

tcgacaacgacgccacgttgctgt-ttgtcgtg	CRISPR spacer
gcgacgacgacgccacgatgctgtaccggcgg-	Protospacer
 ****.*********** ****** ..* **

26. spacer 3.1|677382|32|NZ_CP009632|PILER-CR matches to NZ_CP050111 (Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b1, complete sequence) position: , mismatch: 8, identity: 0.75

tcgacaacgacgccacgttgctgtttgtcgtg	CRISPR spacer
tcgaccacgacgccacggtgctgacttacctc	Protospacer
***** *********** ***** .*  * *

27. spacer 3.1|677382|32|NZ_CP009632|PILER-CR matches to NZ_CP021016 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6991 plasmid pF, complete sequence) position: , mismatch: 8, identity: 0.75

tcgacaacgacgccacgttgctgt-ttgtcgtg	CRISPR spacer
gcgacgacgacgccacgatgctgtaccggcgg-	Protospacer
 ****.*********** ****** ..* **

28. spacer 3.1|677382|32|NZ_CP009632|PILER-CR matches to NZ_CP020890 (Xanthomonas citri pv. citri strain TX160197 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

tcgacaacgacgccacgttgctgt-ttgtcgtg	CRISPR spacer
gcgacgacgacgccacgatgctgtaccggcgg-	Protospacer
 ****.*********** ****** ..* **

29. spacer 2.1|675753|32|NZ_CP009632|PILER-CR matches to NZ_CP035572 (Lactobacillus plantarum strain SRCM103303 plasmid unnamed1) position: , mismatch: 10, identity: 0.688

tcgacaacgacgccacgttgctgtttgtcgtg	CRISPR spacer
ccaccaatgacgccaagttgctgtttgagtaa	Protospacer
.*. ***.******* ***********    .

30. spacer 2.1|675753|32|NZ_CP009632|PILER-CR matches to NZ_CP021931 (Lactobacillus plantarum strain TMW 1.1308 plasmid pL11308-1, complete sequence) position: , mismatch: 10, identity: 0.688

tcgacaacgacgccacgttgctgtttgtcgtg	CRISPR spacer
ccaccaatgacgccaagttgctgtttgagtaa	Protospacer
.*. ***.******* ***********    .

31. spacer 2.1|675753|32|NZ_CP009632|PILER-CR matches to NZ_CP035570 (Lactobacillus plantarum strain SRCM103300 plasmid unnamed4) position: , mismatch: 10, identity: 0.688

tcgacaacgacgccacgttgctgtttgtcgtg	CRISPR spacer
ccaccaatgacgccaagttgctgtttgagtaa	Protospacer
.*. ***.******* ***********    .

32. spacer 2.1|675753|32|NZ_CP009632|PILER-CR matches to NC_013449 (Streptomyces sp. W9 plasmid pCQ3, complete sequence) position: , mismatch: 10, identity: 0.688

tcgacaacgacgccacgttgctgtttgtcgtg	CRISPR spacer
tcggcagcgacgccacgttgctgagctccagc	Protospacer
***.**.****************  . .*.

33. spacer 2.1|675753|32|NZ_CP009632|PILER-CR matches to NZ_CP013150 (Lactobacillus plantarum strain MF1298 plasmid pMF1298-1, complete sequence) position: , mismatch: 10, identity: 0.688

tcgacaacgacgccacgttgctgtttgtcgtg	CRISPR spacer
ccaccaatgacgccaagttgctgtttgagtaa	Protospacer
.*. ***.******* ***********    .

34. spacer 2.1|675753|32|NZ_CP009632|PILER-CR matches to NZ_CP050806 (Lactobacillus plantarum strain SPC-SNU 72-2 plasmid pLBP752, complete sequence) position: , mismatch: 10, identity: 0.688

tcgacaacgacgccacgttgctgtttgtcgtg	CRISPR spacer
ccaccaatgacgccaagttgctgtttgagtaa	Protospacer
.*. ***.******* ***********    .

35. spacer 2.3|675948|32|NZ_CP009632|PILER-CR matches to NC_013449 (Streptomyces sp. W9 plasmid pCQ3, complete sequence) position: , mismatch: 10, identity: 0.688

tcgacagcgacgcaacgttgctgtttgtcgtg	CRISPR spacer
tcggcagcgacgccacgttgctgagctccagc	Protospacer
***.********* *********  . .*.

36. spacer 3.1|677382|32|NZ_CP009632|PILER-CR matches to NZ_CP035572 (Lactobacillus plantarum strain SRCM103303 plasmid unnamed1) position: , mismatch: 10, identity: 0.688

tcgacaacgacgccacgttgctgtttgtcgtg	CRISPR spacer
ccaccaatgacgccaagttgctgtttgagtaa	Protospacer
.*. ***.******* ***********    .

37. spacer 3.1|677382|32|NZ_CP009632|PILER-CR matches to NZ_CP021931 (Lactobacillus plantarum strain TMW 1.1308 plasmid pL11308-1, complete sequence) position: , mismatch: 10, identity: 0.688

tcgacaacgacgccacgttgctgtttgtcgtg	CRISPR spacer
ccaccaatgacgccaagttgctgtttgagtaa	Protospacer
.*. ***.******* ***********    .

38. spacer 3.1|677382|32|NZ_CP009632|PILER-CR matches to NZ_CP035570 (Lactobacillus plantarum strain SRCM103300 plasmid unnamed4) position: , mismatch: 10, identity: 0.688

tcgacaacgacgccacgttgctgtttgtcgtg	CRISPR spacer
ccaccaatgacgccaagttgctgtttgagtaa	Protospacer
.*. ***.******* ***********    .

39. spacer 3.1|677382|32|NZ_CP009632|PILER-CR matches to NC_013449 (Streptomyces sp. W9 plasmid pCQ3, complete sequence) position: , mismatch: 10, identity: 0.688

tcgacaacgacgccacgttgctgtttgtcgtg	CRISPR spacer
tcggcagcgacgccacgttgctgagctccagc	Protospacer
***.**.****************  . .*.

40. spacer 3.1|677382|32|NZ_CP009632|PILER-CR matches to NZ_CP013150 (Lactobacillus plantarum strain MF1298 plasmid pMF1298-1, complete sequence) position: , mismatch: 10, identity: 0.688

tcgacaacgacgccacgttgctgtttgtcgtg	CRISPR spacer
ccaccaatgacgccaagttgctgtttgagtaa	Protospacer
.*. ***.******* ***********    .

41. spacer 3.1|677382|32|NZ_CP009632|PILER-CR matches to NZ_CP050806 (Lactobacillus plantarum strain SPC-SNU 72-2 plasmid pLBP752, complete sequence) position: , mismatch: 10, identity: 0.688

tcgacaacgacgccacgttgctgtttgtcgtg	CRISPR spacer
ccaccaatgacgccaagttgctgtttgagtaa	Protospacer
.*. ***.******* ***********    .

42. spacer 3.3|677577|32|NZ_CP009632|PILER-CR matches to NC_013449 (Streptomyces sp. W9 plasmid pCQ3, complete sequence) position: , mismatch: 10, identity: 0.688

tcgacagcgacgcaacgttgctgtttgtcgtg	CRISPR spacer
tcggcagcgacgccacgttgctgagctccagc	Protospacer
***.********* *********  . .*.

43. spacer 2.1|675753|32|NZ_CP009632|PILER-CR matches to NZ_CP035557 (Lactobacillus plantarum strain SRCM103297 plasmid unnamed1) position: , mismatch: 11, identity: 0.656

tcgacaacgacgccacgttgctgtttgtcgtg	CRISPR spacer
ctaccaatgacgccaagttgctgtttgagtaa	Protospacer
... ***.******* ***********    .

44. spacer 2.1|675753|32|NZ_CP009632|PILER-CR matches to NZ_CP035557 (Lactobacillus plantarum strain SRCM103297 plasmid unnamed1) position: , mismatch: 11, identity: 0.656

tcgacaacgacgccacgttgctgtttgtcgtg	CRISPR spacer
ctaccaatgacgccaagttgctgtttgagtaa	Protospacer
... ***.******* ***********    .

45. spacer 2.1|675753|32|NZ_CP009632|PILER-CR matches to NZ_CP028242 (Lactobacillus plantarum strain SRCM101518 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.656

tcgacaacgacgccacgttgctgtttgtcgtg	CRISPR spacer
ctaccaatgacgccaagttgctgtttgagtaa	Protospacer
... ***.******* ***********    .

46. spacer 3.1|677382|32|NZ_CP009632|PILER-CR matches to NZ_CP035557 (Lactobacillus plantarum strain SRCM103297 plasmid unnamed1) position: , mismatch: 11, identity: 0.656

tcgacaacgacgccacgttgctgtttgtcgtg	CRISPR spacer
ctaccaatgacgccaagttgctgtttgagtaa	Protospacer
... ***.******* ***********    .

47. spacer 3.1|677382|32|NZ_CP009632|PILER-CR matches to NZ_CP035557 (Lactobacillus plantarum strain SRCM103297 plasmid unnamed1) position: , mismatch: 11, identity: 0.656

tcgacaacgacgccacgttgctgtttgtcgtg	CRISPR spacer
ctaccaatgacgccaagttgctgtttgagtaa	Protospacer
... ***.******* ***********    .

48. spacer 3.1|677382|32|NZ_CP009632|PILER-CR matches to NZ_CP028242 (Lactobacillus plantarum strain SRCM101518 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.656

tcgacaacgacgccacgttgctgtttgtcgtg	CRISPR spacer
ctaccaatgacgccaagttgctgtttgagtaa	Protospacer
... ***.******* ***********    .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

29642 : 64828

uncultured_Caudovirales_phage(25.0%)

integrase,transposase

attL 21439:21454|attR 38839:38854

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
21439:21454	attL	NA	NA	NA	NA
WP_080938758.1\|29642_30626_+\|integrase	site-specific integrase	A0A2H4IYX8	uncultured_Caudovirales_phage	2.4e-36	32.7
WP_011879678.1\|31023_31302_+	HU family DNA-binding protein	B5TA87	Burkholderia_phage	5.8e-17	56.7
WP_106919343.1\|33922_34740_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_011879686.1\|37169_37913_+	hypothetical protein	NA	NA	NA	NA
WP_011879687.1\|38184_38439_+	hypothetical protein	NA	NA	NA	NA
WP_162486635.1\|38545_39127_-	hypothetical protein	NA	NA	NA	NA
38839:38854	attR	NA	NA	NA	NA
WP_045579921.1\|39182_40118_+\|transposase	IS5 family transposase	E5E3P6	Burkholderia_phage	6.8e-142	86.7
WP_106919343.1\|40150_40967_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_011879689.1\|41246_41600_-	BON domain-containing protein	NA	NA	NA	NA
WP_011879690.1\|42335_43409_+	VIT1/CCC1 transporter family protein	NA	NA	NA	NA
WP_080484376.1\|43498_43921_+	DUF3331 domain-containing protein	NA	NA	NA	NA
WP_011879692.1\|44222_44450_-	hypothetical protein	NA	NA	NA	NA
WP_043292721.1\|44845_45079_+\|transposase	transposase	NA	NA	NA	NA
WP_043292564.1\|45645_45990_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	6.5e-42	72.2
WP_045579526.1\|46020_47622_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	5.8e-133	55.9
WP_011879697.1\|47986_49018_+\|transposase	IS110 family transposase	M1NSC9	Streptococcus_phage	1.8e-07	28.0
WP_011879699.1\|50289_50589_+	H-NS histone family protein	NA	NA	NA	NA
WP_011879700.1\|51290_51929_-	response regulator transcription factor	NA	NA	NA	NA
WP_080938761.1\|52289_53837_-	GGDEF domain-containing protein	NA	NA	NA	NA
WP_045579527.1\|54786_55977_+	EAL domain-containing protein	NA	NA	NA	NA
WP_080938796.1\|56834_57929_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_043292565.1\|60788_61232_+	hypothetical protein	NA	NA	NA	NA
WP_011879708.1\|62381_63491_+	NAD(P)/FAD-dependent oxidoreductase	A0A2H4J2Q2	uncultured_Caudovirales_phage	4.8e-78	51.7
WP_155744937.1\|63638_64828_-\|transposase	IS3 family transposase	A0A1B0Z042	Pseudomonas_phage	6.0e-103	65.5

DBSCAN-SWA_2

584019 : 650269

uncultured_Caudovirales_phage(35.71%)

integrase,transposase

attL 583868:583899|attR 660514:660528

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
583868:583899	attL	NA	NA	NA	NA
WP_080938772.1\|584019_585003_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
583868:583899	attL	NA	NA	NA	NA
WP_144410681.1\|584999_585383_+	hypothetical protein	NA	NA	NA	NA
WP_085954470.1\|585415_586232_+\|transposase	IS5-like element ISBcen20 family transposase	NA	NA	NA	NA
WP_080938773.1\|586282_586870_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_045579687.1\|586866_587865_+\|integrase	tyrosine-type recombinase/integrase	A0A142F1N9	Bacillus_phage	4.9e-21	25.4
WP_052691584.1\|588003_588630_-	transcriptional regulator	NA	NA	NA	NA
587915:587946	attR	NA	NA	NA	NA
WP_045579957.1\|589455_591108_+	GMC family oxidoreductase	NA	NA	NA	NA
587915:587946	attR	NA	NA	NA	NA
WP_080938801.1\|591334_592303_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_155625037.1\|592464_592641_+	hypothetical protein	NA	NA	NA	NA
WP_045579689.1\|592726_593356_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_045579690.1\|593488_594571_+	alkene reductase	NA	NA	NA	NA
WP_045579959.1\|594627_595416_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_045579691.1\|595656_596502_+	alpha/beta hydrolase	A0A1L7N183	Ralstonia_phage	1.4e-05	23.2
WP_045579692.1\|596558_596957_+	hypothetical protein	NA	NA	NA	NA
WP_045579693.1\|596963_598214_+	NADH:flavin oxidoreductase/NADH oxidase family protein	NA	NA	NA	NA
WP_045579694.1\|598259_598841_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_045579960.1\|598912_599776_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_045579695.1\|599899_600883_+	NADPH:quinone oxidoreductase family protein	NA	NA	NA	NA
WP_106919311.1\|601856_603094_-\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	1.1e-160	98.2
WP_045579696.1\|603597_604359_-	SOS response-associated peptidase family protein	NA	NA	NA	NA
WP_045579697.1\|604489_604816_-	H-NS histone family protein	NA	NA	NA	NA
WP_045579698.1\|604980_605226_+	hypothetical protein	NA	NA	NA	NA
WP_045579699.1\|605225_605540_+	hypothetical protein	NA	NA	NA	NA
WP_144410682.1\|605847_606063_+	hypothetical protein	NA	NA	NA	NA
WP_155625038.1\|606082_606229_+	hypothetical protein	NA	NA	NA	NA
WP_045579701.1\|606272_606485_+	hypothetical protein	NA	NA	NA	NA
WP_080938775.1\|606502_606778_+	YkgJ family cysteine cluster protein	NA	NA	NA	NA
WP_045579702.1\|606820_607045_+	hypothetical protein	NA	NA	NA	NA
WP_144410683.1\|607054_607498_+	hypothetical protein	NA	NA	NA	NA
WP_012464914.1\|607547_607778_+	hypothetical protein	NA	NA	NA	NA
WP_144410684.1\|607785_608004_+	hypothetical protein	NA	NA	NA	NA
WP_045579703.1\|608007_608208_+	hypothetical protein	NA	NA	NA	NA
WP_174479797.1\|608221_608488_+	hypothetical protein	NA	NA	NA	NA
WP_155625039.1\|608488_608815_+	hypothetical protein	NA	NA	NA	NA
WP_080938796.1\|610261_611356_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_045579705.1\|611989_612940_+	DNA-binding protein	NA	NA	NA	NA
WP_045579706.1\|612982_614455_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_155624704.1\|614451_614619_-	hypothetical protein	NA	NA	NA	NA
WP_059913556.1\|614830_615100_+	hypothetical protein	NA	NA	NA	NA
WP_045579707.1\|615079_616186_-	NAD(P)/FAD-dependent oxidoreductase	A0A2H4J2Q2	uncultured_Caudovirales_phage	3.1e-77	53.2
WP_045579708.1\|616204_616615_-	DUF2703 domain-containing protein	NA	NA	NA	NA
WP_045579709.1\|616634_618398_-	arsenical pump-driving ATPase	NA	NA	NA	NA
WP_045579963.1\|618412_618784_-	arsenite efflux transporter metallochaperone ArsD	NA	NA	NA	NA
WP_059738487.1\|618952_619675_-	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	3.9e-97	73.0
WP_045579711.1\|619667_620090_-	arsenate reductase (glutaredoxin)	A0A2H4J8T1	uncultured_Caudovirales_phage	2.6e-48	68.6
WP_045579712.1\|620110_621181_-	ACR3 family arsenite efflux transporter	NA	NA	NA	NA
WP_045579713.1\|621256_621751_-	arsenate reductase ArsC	A0A2H4J8A6	uncultured_Caudovirales_phage	8.5e-27	45.2
WP_045579714.1\|621761_622256_-	arsenate reductase ArsC	A0A2H4J8A6	uncultured_Caudovirales_phage	1.3e-22	39.4
WP_045579715.1\|622392_622734_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_045579716.1\|622933_623296_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_045579717.1\|623506_624292_+	substrate-binding domain-containing protein	NA	NA	NA	NA
WP_045579718.1\|624460_626950_-	arsenate reductase (azurin) large subunit	NA	NA	NA	NA
WP_045579719.1\|626961_627468_-	arsenate reductase (azurin) small subunit	NA	NA	NA	NA
WP_045579720.1\|628487_628874_-	DUF302 domain-containing protein	NA	NA	NA	NA
WP_052691585.1\|628942_629638_-	cytochrome c4	NA	NA	NA	NA
WP_045579965.1\|629815_630346_-	hypothetical protein	NA	NA	NA	NA
WP_045579721.1\|630661_633601_-\|transposase	Tn3 family transposase	A0A125RQ78	Bacillus_phage	2.3e-26	19.7
WP_045579722.1\|633747_634782_-\|transposase	IS630 family transposase	S5VXX4	Leptospira_phage	9.4e-60	36.6
WP_045579723.1\|635112_635847_+	hypothetical protein	NA	NA	NA	NA
WP_106919389.1\|636099_636324_+	RHS repeat protein	NA	NA	NA	NA
WP_080938778.1\|636423_640638_+	peptidase C39	NA	NA	NA	NA
WP_106919311.1\|640669_641907_-\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	1.1e-160	98.2
WP_106919378.1\|641826_642546_+	hypothetical protein	NA	NA	NA	NA
WP_144410685.1\|642555_642897_+	hypothetical protein	NA	NA	NA	NA
WP_059462736.1\|643049_643301_-	hypothetical protein	NA	NA	NA	NA
WP_045579725.1\|643531_645106_-\|transposase	IS66 family transposase	A0A218MNE7	uncultured_virus	4.1e-123	46.4
WP_080938779.1\|645169_645517_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_080938802.1\|645504_645879_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_080938780.1\|645903_646671_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_017333797.1\|648298_648643_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	1.1e-41	71.3
WP_045579727.1\|648673_650269_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	2.9e-132	56.3
660514:660528	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP009631

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP009631_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009631_1

18488-18584

Orphan

Consensus_repeat	Method
CCGGTCAACGCGCCGGCCGGGTTACCGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP009631_1

>merge|NZ_CP009631|1|18488-18584|CRISPRCasFinder
CCGGTCAACGCGCCGGCCGGGTTACCGCCACCAGCGTTGCCCAATGCGCCGGTCACCGTGCCGAGTGCTCCGGTCAATGCGCCGGCCGGGTTACCGC

>NZ_CP009631|1|1|18488-18584|CRISPRCasFinder
CCGGTCAACGCGCCGGCCGGGTTACCGC	CACCAGCGTTGCCCAATGCGCCGGTCACCGTGCCGAGTGCT
CCGGTCAATGCGCCGGCCGGGTTACCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009631.1\|WP_045579402.1\|29558_30992_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270238
NZ_CP009631.1\|WP_011883469.1\|31086_31725_+\|2-hydroxychromene-2-carboxylate-isomerase	unknown	unknown	gnl\|CDD\|239320
NZ_CP009631.1\|WP_004186709.1\|9890_10061_-\|rubredoxin	unknown	unknown	gnl\|CDD\|224687
NZ_CP009631.1\|WP_011883494.1\|16090_16606_-\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|237123
NZ_CP009631.1\|WP_045578495.1\|19729_20377_+\|PAS-domain-containing-protein	unknown	unknown	gnl\|CDD\|225512
NZ_CP009631.1\|WP_045578492.1\|13018_13312_-\|co-chaperone-GroES	unknown	unknown	gnl\|CDD\|178988
NZ_CP009631.1\|WP_045578493.1\|16655_17015_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226765
NZ_CP009631.1\|WP_045578496.1\|20523_21255_+\|DsbA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|239322
NZ_CP009631.1\|WP_011883502.1\|13686_14196_-\|SRPBCC-family-protein	unknown	unknown	gnl\|CDD\|176866
NZ_CP009631.1\|WP_011883467.1\|31794_32739_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176152
NZ_CP009631.1\|WP_014722546.1\|14219_14852_-\|membrane-protein	unknown	unknown	gnl\|CDD\|379924
NZ_CP009631.1\|WP_011883496.1\|15299_16091_-\|anti-sigma-factor	unknown	unknown	gnl\|CDD\|227949
NZ_CP009631.1\|WP_011883504.1\|11331_12972_-\|chaperonin-GroEL	unknown	unknown	gnl\|CDD\|234573
NZ_CP009631.1\|WP_011883473.1\|28733_29090_-\|BON-domain-containing-protein	unknown	unknown	gnl\|CDD\|335963
NZ_CP009631.1\|WP_045578497.1\|21367_22807_+\|DHA2-family-efflux-MFS-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|129794
NZ_CP009631.1\|WP_045579401.1\|14848_15268_-\|quinol-oxidase	unknown	unknown	gnl\|CDD\|259885
NZ_CP009631.1\|WP_011883481.1\|23092_23881_+\|sulfite-exporter-TauE/SafE-family-protein	unknown	unknown	gnl\|CDD\|376667
NZ_CP009631.1\|WP_045578498.1\|24047_25883_-\|peptidase-S1	unknown	unknown	gnl\|CDD\|225490
NZ_CP009631.1\|WP_034194489.1\|10316_11183_+\|hydroxymethylpyrimidine/phosphomethylpyrimidine-kinase	unknown	unknown	gnl\|CDD\|238574
NZ_CP009631.1\|WP_011883475.1\|26491_28582_-\|D-(-)-3-hydroxybutyrate-oligomer-hydrolase	unknown	unknown	gnl\|CDD\|313759

Protein	Function_ID	Function_description	E-value
NZ_CP009631.1\|WP_045579402.1\|29558_30992_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|270238	cd13520, PBP2_TAXI_TRAP, Substrate binding domain of TAXI proteins of the tripartite ATP-independent periplasmic transporters; the type 2 periplasmic binding protein fold. This group includes Thermus thermophilus GluBP (TtGluBP) of TAXI-TRAP family and closely related proteins. TRAP transporters are ubiquitous in prokaryotes, but absent from eukaryotes. They are comprised of an SBP (substrate-binding protein) of the DctP or TAXI families and two unequally sized integral membrane components. Although TtGluBP is predicted to be an L-glutamate and/or an L-glutamine-binding protein, the substrate spectrum of TAXI proteins remains to be defined. A sequence-homology search also shows that TtGluBP shares low sequence homology with putative immunogenic proteins of uncharacterized function. The substrate-binding domain of TAXI proteins belongs to the type 2 periplasmic-binding fold protein (PBP2) superfamily, whose members are involved in chemotaxis and uptake of nutrients and other small molecules from the extracellular space as a primary receptor. PBP2 typically comprises of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and tworeceptor cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.78618e-30
NZ_CP009631.1\|WP_011883469.1\|31086_31725_+\|2-hydroxychromene-2-carboxylate-isomerase	gnl\|CDD\|239320	cd03022, DsbA_HCCA_Iso, DsbA family, 2-hydroxychromene-2-carboxylate (HCCA) isomerase subfamily; HCCA isomerase is a glutathione (GSH) dependent enzyme involved in the naphthalene catabolic pathway. It converts HCCA, a hemiketal formed spontaneously after ring cleavage of 1,2-dihydroxynapthalene by a dioxygenase, into cis-o-hydroxybenzylidenepyruvate (cHBPA). This is the fourth reaction in a six-step pathway that converts napthalene into salicylate. HCCA isomerase is unique to bacteria that degrade polycyclic aromatic compounds. It is closely related to the eukaryotic protein, GSH transferase kappa (GSTK).	2.98468e-43
NZ_CP009631.1\|WP_004186709.1\|9890_10061_-\|rubredoxin	gnl\|CDD\|224687	COG1773, COG1773, Rubredoxin [Energy production and conversion].	1.12689e-20
NZ_CP009631.1\|WP_011883494.1\|16090_16606_-\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|237123	PRK12511, PRK12511, RNA polymerase sigma factor; Provisional.	3.05417e-38
NZ_CP009631.1\|WP_045578495.1\|19729_20377_+\|PAS-domain-containing-protein	gnl\|CDD\|225512	COG2964, COG2964, Uncharacterized protein conserved in bacteria [Function unknown].	1.15152e-69
NZ_CP009631.1\|WP_045578492.1\|13018_13312_-\|co-chaperone-GroES	gnl\|CDD\|178988	PRK00364, groES, co-chaperonin GroES; Reviewed.	6.40171e-55
NZ_CP009631.1\|WP_045578493.1\|16655_17015_-\|hypothetical-protein	gnl\|CDD\|226765	COG4315, COG4315, Uncharacterized protein conserved in bacteria [Function unknown].	4.17957e-37
NZ_CP009631.1\|WP_045578496.1\|20523_21255_+\|DsbA-family-oxidoreductase	gnl\|CDD\|239322	cd03024, DsbA_FrnE, DsbA family, FrnE subfamily; FrnE is a DsbA-like protein containing a CXXC motif. It is presumed to be a thiol oxidoreductase involved in polyketide biosynthesis, specifically in the production of the aromatic antibiotics frenolicin and nanaomycins.	1.58895e-85
NZ_CP009631.1\|WP_011883502.1\|13686_14196_-\|SRPBCC-family-protein	gnl\|CDD\|176866	cd07824, SRPBCC_6, Ligand-binding SRPBCC domain of an uncharacterized subfamily of proteins. Uncharacterized group of the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain superfamily. SRPBCC domains have a deep hydrophobic ligand-binding pocket and they bind diverse ligands. SRPBCC domains include the steroidogenic acute regulatory protein (StAR)-related lipid transfer (START) domains of mammalian STARD1-STARD15, the C-terminal catalytic domains of the alpha oxygenase subunit of Rieske-type non-heme iron aromatic ring-hydroxylating oxygenases (RHOs_alpha_C), Class I and II phosphatidylinositol transfer proteins (PITPs), Bet v 1 (the major pollen allergen of white birch, Betula verrucosa), CoxG, CalC, and related proteins. Other members of the superfamily include PYR/PYL/RCAR plant proteins, the aromatase/cyclase (ARO/CYC) domains of proteins such as Streptomyces glaucescens tetracenomycin, and the SRPBCC domains of Streptococcus mutans Smu.440 and related proteins.	8.58257e-68
NZ_CP009631.1\|WP_011883467.1\|31794_32739_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176152	cd08463, PBP2_DntR_like_4, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator similar to DntR, which is involved in the catabolism of dinitrotoluene; contains the type 2 periplasmic binding fold. This CD includes an uncharacterized LysR-type transcriptional regulator similar to DntR, NahR, and LinR, which are involved in the degradation of aromatic compounds. The transcription of the genes encoding enzymes involved in such degradation is regulated and expression of these enzymes is enhanced by inducers, which are either an intermediate in the metabolic pathway or compounds to be degraded. This substrate-binding domain shows significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	2.98116e-89
NZ_CP009631.1\|WP_014722546.1\|14219_14852_-\|membrane-protein	gnl\|CDD\|379924	pfam17131, LolA_like, Outer membrane lipoprotein-sorting protein. This is likely to be a family of outer-membrane lipoprotein-sorting proteins.	5.76889e-06
NZ_CP009631.1\|WP_011883496.1\|15299_16091_-\|anti-sigma-factor	gnl\|CDD\|227949	COG5662, COG5662, Predicted transmembrane transcriptional regulator (anti-sigma factor) [Transcription].	1.02399e-20
NZ_CP009631.1\|WP_011883504.1\|11331_12972_-\|chaperonin-GroEL	gnl\|CDD\|234573	PRK00013, groEL, chaperonin GroEL; Reviewed.	0
NZ_CP009631.1\|WP_011883473.1\|28733_29090_-\|BON-domain-containing-protein	gnl\|CDD\|335963	pfam04972, BON, BON domain. This domain is found in a family of osmotic shock protection proteins. It is also found in some Secretins and a group of potential haemolysins. Its likely function is attachment to phospholipid membranes.	2.11631e-10
NZ_CP009631.1\|WP_045578497.1\|21367_22807_+\|DHA2-family-efflux-MFS-transporter-permease-subunit	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	1.10509e-65
NZ_CP009631.1\|WP_045579401.1\|14848_15268_-\|quinol-oxidase	gnl\|CDD\|259885	cd04223, N2OR_C, The C-terminal cupredoxin domain of Nitrous-oxide reductase. Nitrous-oxide reductase participates in nitrogen metabolism and catalyzes the last step in dissimilatory nitrate reduction, the two-electron reduction of N2O to N2. It contains copper ions as cofactors in the form of a binuclear CuA center at the site of electron entry and a tetranuclear CuZ centre at the active site. The C-terminus of Nitrous-oxide reductase is a cupredoxin domain.	0.00100722
NZ_CP009631.1\|WP_011883481.1\|23092_23881_+\|sulfite-exporter-TauE/SafE-family-protein	gnl\|CDD\|376667	pfam01925, TauE, Sulfite exporter TauE/SafE. This is a family of integral membrane proteins where the alignment appears to contain two duplicated modules of three transmembrane helices. The proteins are involved in the transport of anions across the cytoplasmic membrane during taurine metabolism as an exporter of sulfoacetate. This family used to be known as DUF81.	1.54459e-25
NZ_CP009631.1\|WP_045578498.1\|24047_25883_-\|peptidase-S1	gnl\|CDD\|225490	COG2939, COG2939, Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism].	9.34131e-127
NZ_CP009631.1\|WP_034194489.1\|10316_11183_+\|hydroxymethylpyrimidine/phosphomethylpyrimidine-kinase	gnl\|CDD\|238574	cd01169, HMPP_kinase, 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate kinase (HMPP-kinase) catalyzes two consecutive phosphorylation steps in the thiamine phosphate biosynthesis pathway, leading to the synthesis of vitamin B1. The first step is the phosphorylation of the hydroxyl group of HMP to form 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate (HMP-P) and then the phophorylation of HMP-P to form 4-amino-5-hydroxymethyl-2-methyl-pyrimidine pyrophosphate (HMP-PP), which is the substrate for the thiamine synthase coupling reaction.	1.74787e-71
NZ_CP009631.1\|WP_011883475.1\|26491_28582_-\|D-(-)-3-hydroxybutyrate-oligomer-hydrolase	gnl\|CDD\|313759	pfam10605, 3HBOH, 3HB-oligomer hydrolase (3HBOH). D-(-)-3-hydroxybutyrate oligomer hydrolase (also known as 3HB-oligomer hydrolase) functions in the degradation of poly-3-hydroxybutyrate (PHB). It catalyzes the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers.	0

>NZ_CP009631.1|WP_045578493.1|16655_17015_-|hypothetical-protein
MKTMMVALALTAAVARPAAAEPPQVGDGKLVDEHQMTLYVFDHDAPGKSTCTGACVANWPPALADGYDHAAGPLTLVARDDGSKQWAYHGRPLYRWKMDRKAGDASGDGVGGMWHVARP
>NZ_CP009631.1|WP_011883494.1|16090_16606_-|sigma-70-family-RNA-polymerase-sigma-factor
MSYESDLLVWLPHLTRYARALTGERAWADDLVQDTLERALNRPPRDTANLRAWLLTLLRHRFIDQLRARHEIAVDDATAPWQTMAAPGGEIGGLVLRDVQRALYRLPVEQREVLLLVALEELSYRDAAQVLGVPVGTVMSRLSRAREQMRALLSGEPPTHGTAALRVIGKT
>NZ_CP009631.1|WP_011883496.1|15299_16091_-|anti-sigma-factor
MDDEPRTPSHDADETASAQLLSALLDGELSGPERREVLERLRSDPQSADRFAHYGAQRDALHALFPLPPAAPALFVQRRASRRHAAAYAFAGLAAGLLLSVALHAGWTAFGAAPAFAARADAAYAVYALDRDHPVEVGAHDAGDAARLTGWLSARLGRPVRAPALDEYGYALLGGRLLPGDAGPAAQLMYQRADGARVTLYMTAYDARRLAPRALSSQGRHTYFWSDRGIGYALSGDGDERRLRELAIDACGALGGPTDAWKG
>NZ_CP009631.1|WP_045579401.1|14848_15268_-|quinol-oxidase
MNPKILKLLTAGALAAGTALALADATVPTRVPVDADGVQRVTIVGGSYFFRPALVIVRADVPVELTVSAEPGVVPHSFEIDAPQAGIAVHTELTTTPRTLRFTPRQPGRFAYYCTHRLLFLRSHRERGMAGVLVVEAAP
>NZ_CP009631.1|WP_014722546.1|14219_14852_-|membrane-protein
MIAALLAASLIGASMTADPVTVAHAHFEQVHSYRATIRSSARSGEHAEIHYAYLKPGFVRMDFVSPHHGAVLAYDPGDGKVRLRPFGEHVPPALTLSPANPLVRDHSGHRVDRSDVGELLRNVQALQQGGATVTEGEETIGGRAALRVTVTGAPAHAVDGVHRYRLWLDADDGFPLKVVSFADGDGEPLETVTLDDVEIDVAFPARFFAP
>NZ_CP009631.1|WP_011883502.1|13686_14196_-|SRPBCC-family-protein
MAEYRFSTTWRVDAPLAAVWDAIYQVDRWPEWWKGAVRTVELEPGDARGVGALQRYTWKGALPYRLTFDMRVLRVERPRVLAGRASGAIEGDGRWSFRGDGARTVVRYDWHIRTREPWMNWLAPVARPLFTWNHDVVMREGARGLARLLGTTVETDGRTFRPVAGCPDM
>NZ_CP009631.1|WP_045578492.1|13018_13312_-|co-chaperone-GroES
MNLRPLHDRVIVKRLDQETKTASGIVIPDAAAEKPDQGEVLAIGPGKRDDKGALIALDVKVGDRVLFGKYAGQTVKVDGQELLVMREEDIMAVVNAK
>NZ_CP009631.1|WP_011883504.1|11331_12972_-|chaperonin-GroEL
MAAKDVVFGDSARSKMVEGVNILANAVKVTLGPKGRNVVLERSFGGPTVTKDGVSVAKEIELKDKLQNMGAQMVKEVASKTSDNAGDGTTTATVLAQSIVREGMKYVASGMNPMDLKRGIDKAVAAAVEELKKISKPCTTNKEIAQVGSISANSDSSIGDRIAEAMDKVGKEGVITVEDGKSLADELDVVEGMQFDRGYLSPYFINNPDKQVAVLDNPFVLLHDKKVSNIRDLLPVLEQVAKAGRPLLIIAEDVEGEALATLVVNNIRGILKTVAVKAPGFGDRRKAMLEDIAILTGGQVIAEETGLTLEKATLAELGQAKRIEVGKENTTIIDGAGEAASIEARVKQVRTQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVAGGGVALIRARTAIAGLTGANADQNAGIKIVLRAMEEPLRQIVTNGGEEASVVVAAVAAGKGNYGYNAATGEYVDMVEAGVVDPTKVTRTALQNAASVAGLLLTTDAAVAELPKEDAPMPGGMPGGMGGMGMDM
>NZ_CP009631.1|WP_034194489.1|10316_11183_+|hydroxymethylpyrimidine/phosphomethylpyrimidine-kinase
MPSNAPPIVLTFGLSDPTGGSGLQADLMTLASMGCHGVSVLTGYTVRDSAACEEVTGLDPDVVAAQARMLLEDMPVAAFKIGAATRAEVVSAIAEVVADYDGVPLVLAPDFTLDDEHVLAADDLRESIADLLAPQTTLLVADHATLIALAQPDGDAEAPNLDAAVSHLLSQGCEYILSSETGSHRLVNTLYGEEGQLREDMWDRSPHRLMGITDTLGAAIAALLANGQEPPEAVREAQEYLYQSVRDAFRPGMGAYLPDRFFWARSNEETDTPRATKVEPVPRTSHRH
>NZ_CP009631.1|WP_004186709.1|9890_10061_-|rubredoxin
MEYKSWMCLICGWIYDEEAGLPEEGIAPGTRWEDVPINWTCPECGARKEDFEMVQI
>NZ_CP009631.1|WP_045578495.1|19729_20377_+|PAS-domain-containing-protein
MRKKPSPVKDLLLSRYAPIADGIAALFFPYAEAVIHDLHDQTVLYLANNLSKREVGDDSALEEIDHSARERVIGPYEKLNWDGRRMRCVSNVLFDDEGRPAGMMCINFNIAVFDDVRATLDVFIKGAGIVAQPDELFRDDWQERINTFLHGWLRERQVGLNGLTREHRRELVEALYAEGAFRGKSAANYVANVLGMGRATVYKHLKHLKETQGDA
>NZ_CP009631.1|WP_045578496.1|20523_21255_+|DsbA-family-oxidoreductase
MTPLPAPPARPMLTVEIWSDLICPWCWIGKRRFDDALATFPHAQHVDVVLRAYRLMPGQPVEPVEAMLAGKYRMSAAQVDQMLRQVTDAAASVGLRYDLPGTLVGDTLDAHRVVKLAQATGHAHALTERLYRAYFCEHGALFDHAALTDFAVEAGLERAAVEATLRSDAYRDEVEADVARAAQIGGRGVPLFVFGGRYAVSGAQPVDVFAQALERAWHDGASVAFHDDAAACGPDGCELPPRA
>NZ_CP009631.1|WP_045578497.1|21367_22807_+|DHA2-family-efflux-MFS-transporter-permease-subunit
MTHGIHGQQRWYALIVLCLGVLMIVLDSTIVNVALPSIGADLHFTGTALVWVVNAYLLTFGGFLLLGGRLGDLYGQRRMFLAGLVVFTLASLACGVAPSQTLLIAARAVQGFGGAVVSAVSLSLIMNLFTEPGERARAMGVYGFVCAGGGSLGVLLGGLLTSTLSWHWIFLVNLPIGIAVYAMCVALLPRVRVPADAARLDVAGALTVTASLMLAVYGIVGGNEAGWLSPQTVGLIGAALALLAAFIAIEARVAHPLMPLTLFAARNVALANVIGVLWAAAMFAWFFLSALYMQRVLGYGPLQVGLAFLPANLIMAAFSLGLSARIVMRCGIRGPIAAGLLIAACGLALFSRAPVDGGFVWHVLPGMTLLGIGAGVAFNPVLLAAMSDVEPADSGLASGIVNTAFMMGGALGLAVLASLAAARTETLAAAQAAPLDALNGGYHAAFAVGAAFAAAAGLLGLALRIRRQDAMPGVGPAVH
>NZ_CP009631.1|WP_011883481.1|23092_23881_+|sulfite-exporter-TauE/SafE-family-protein
MSLPHIDPLYSLSGLFVGILVGLTGVGGGSLMTPILVLLFGVHPATAVGTDLLYAAATKATGTLVHGLKGSVDWRITGRLAAGSVPAAAVTLWVLHTHGMNSPSTARTIQLVLGVALLLTSLALIFRPQLTALAARNPLAPSPARTLWSTVLTGAVLGVLVSMTSVGAGAIGVTVLLLLYPALATSRIVGSDIAHAVPLTLVAGMGHWLLGSVDWSMLLSLLLGSLPGIVIGSLLSARAPERLLRNLLAATLIAVGVRLVLA
>NZ_CP009631.1|WP_045578498.1|24047_25883_-|peptidase-S1
MTTRKSLKDGFALFGTTLSVPLAAAAAAALLVTGCGGDDGSGPSAATAAAVTAANGSTSATTNAPAAVPADQPYVDDDVYGTGPDDAVTDSAEGAAVVHRQVAIGGKTIQYTATTGHLTTIDPVTSAPNAKMFYVAYTQDNPDPSKPRPVTFFYNGGPGSSSVYLLLGSFGPKRLQSSFPNFTPPAPYKLLDNPDSLLDRTDLVFINPVGTGYSTAIAPAKNKDFWGTDQDARSIDRFIQRYLTKYSRWNSPKFLFGESYGTARSAVVSWVLHEDGIDLNGITLQSSILDYANALSAPGTFPTLAADAFYWKKTTLNPAPTDLDAYMAQARHYADDTLAPLAQKPNPQDGGFVNVRLNLNQRTAQQMGAYIGTDATTLIQTFGNPAALGNVPSSDDNPPYTFFLTLVPGIQIGQYDGRANFTGKGIAPYILPNSGSNDPSITNVGGAYTVLWNSYINTDLKYTSTSSFVDLNDQVFNNWDFSHTDPTGANKGGGNTLYTAGDLAATMSVNPDLKVLSANGYFDAVTPFHQTELTLAQMPLDPTLKAQNLTIKNYPSGHMIYLNDASRTALKGDLGSFYDGILANRGALQRVLKLQARTLQMKQQQLQQQGQ
>NZ_CP009631.1|WP_011883475.1|26491_28582_-|D-(-)-3-hydroxybutyrate-oligomer-hydrolase
MDTHGWGSRILVGAALAALTMLGACNGDETAERNQLPVFVSGSVRTTAYDGASDDLLTAGLGKTGLASAAAPAFADPSRPTAAELRRVAIWSNYRALVDMSANGGYGRFWGPNVDLDGNDTLGEGKIAGTEYLAYADDGSGRKNVTLLVQVPASFDPAQPCIVTATSSGSRGVYGAISAAGEWGLKRGCAVAYNDKGGGNGAQELGSNTVTLIDGTLANAVLAGSASLFTANLTSGDLAAFNSRFPNRYAFKHAHSQQNPEHDWGRATLQSVEFAYWALNQQFAPLVDGSHRGVRYRAGDITTIAASVSNGGGAALAAAEQDTRRWITAVVVGEPQINVRMAPNAVVRESGRPVPSFGRPLADYATLANLLEPCAAASASLAGEPYLSALPLATTQSIRTQRCATLAAAGLVSGADTQSQAADALAQLHAAGYLADSDLLQASMWDSQAIPAIAVTYANAYTRSSVADNLCNFSFATTNAATGAVAAPAASPMPAVFGLGNGVPPTAGINLVFNTGAGVDHRLATPDASFAGALCLRQLWTNGMLDMPANVEAVRVNANLQGKPAIIVQGRSDALVPVNHASRAYVAQNSISEGGRSQLVFYEVTNGQHFDAFLPVAGFDTRFVPVHYYNVQALNLMWRHLKSGAPLPPSQVIRTVPRGGTPGAAPALTSANLPPISTAPGANAIAAGAGAIDVPL
>NZ_CP009631.1|WP_011883473.1|28733_29090_-|BON-domain-containing-protein
MKSIVLRALGVAAVAACLTGSVYAQSSDAAATEAAASSPKAAAKTAKKANRKLGYAVRKAITKAGGVDVANLVVRSKGGAITLEGTVPDQAQIDKAEEAAKSVHGVTSVTNKLTVQQQ
>NZ_CP009631.1|WP_045579402.1|29558_30992_+|ABC-transporter-substrate-binding-protein
MKPASPRPPRRILARFVAVSWRDLALSIGPTVLLAAAAVWLAVKLIQPAPPSTLVISAGPPGSTYWNAAQKYKAILAKNGITLDVEASEGSAQNLARLSDPNAPVDVGFVQSGIGSKERDEQLVSLGSIGYVPLAIMYRGAVVARLSDFKGKRLALGPQGSGARELSLALLKMNGIVPGGPTELLPIAGEDAATALLDGKIDAAFLSGDSTQIPVMSKLFRAPGVHVYSFTQAEAYARRFPYLTAITLPMGVYDLGRNLPASDIHTVAPTIELVARDTLHPALSDLLIEAAREVHGHATILQHAGEFPSAITRGFPLSDDAARYYKSGKSFLYRRLPFWVASLVDRLLVVVVPLIVVLIPGLRLVPSLYGWRVRSRIYRWYGALIALERRALGEHTADERVHLLEELDDIEEAVNRMKMPLAYAGQFYVLREHIGFVRERLSAHEPDAPARMSDASQPPAVAAPPTAETPRATPGSA
>NZ_CP009631.1|WP_011883469.1|31086_31725_+|2-hydroxychromene-2-carboxylate-isomerase
MTTGLDTAQPAWFYDFVSPFSYLLLEQHDKWPDVPFEPVAVALPDLQRHWGQRPSADVPAKRVFTYRHALFRAEQLGIRFKMPPAHPFDTDKALRLAIAMRADIGTVLEMFRFIWHDGNDPSTPAGFAALCERVGVGHGDELIEFEETSAQLRRNTDDAIALGVFGVPTFWMNQQLFWGEDALPMVLYCARTPNWLESGEVKRISTLPKGRA
>NZ_CP009631.1|WP_011883467.1|31794_32739_+|LysR-family-transcriptional-regulator
MEDDRTASLDIWLVRVLRTLLLERSVTQAALRLNQTQPAISTALRKLRETLNDPILVRGKSGMVPTEYGASLLGAASRALREVDFIATPHGDFEPSSARRTFRVAAPDYLNDFFMPTLIARFRDAAPHAHLEIDSLNPALDHAGALETGALDLVIGNWPKPDPRFARQDLFSDTIVCLMRAAHPLAHEPLTRDAYAAAAHVAPTPYTGDKRNAIEIGLARAQLTRRVVTTLPYFGIVPQVLLQADLIFTTTRRFATHYAQLLPLVVVEPPVPFPRIRSYLLTHPQPDRPTDIAWLCALMQSVSDELTAARVRKR

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Crispr_ID: NZ_CP009631_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009631_2

980997-981127

Orphan

Consensus_repeat	Method
GTCGCATCCGACCCATCCATCGC	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP009631_2

>merge|NZ_CP009631|2|980997-981127|CRISPRCasFinder
GTCGCATCGGACGCGTCCATCGCATCGGTTGAGTCGGTCGAGTCTGACGAGTCGGTCGCATCCGACCCATCCATCGCATCCGACCCATCCATCGCATCCGACCCATCCATCGCATCCGACCCATCCATCGC

>NZ_CP009631|2|2|980997-981127|CRISPRCasFinder
GTCGCATCGGACGCGTCCATCGC	ATCGGTTGAGTCGGTCGAGTCTGACGAGTCG
GTCGCATCCGACCCATCCATCGC	ATCCGACCCATCCATCGCATCCGACCCATCC
ATCGCATCCGACCCATCCATCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009631.1\|WP_045578709.1\|976321_977194_+\|DUF1275-domain-containing-protein	unknown	unknown	gnl\|CDD\|377734
NZ_CP009631.1\|WP_011886238.1\|987941_988781_-\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|182574
NZ_CP009631.1\|WP_014723808.1\|972786_974094_+\|pyrimidine-permease	unknown	unknown	gnl\|CDD\|132655
NZ_CP009631.1\|WP_045578710.1\|979527_980883_+\|glutathione-disulfide-reductase	unknown	unknown	gnl\|CDD\|235701
NZ_CP009631.1\|WP_045578707.1\|969294_971262_+\|flagellar-hook-associated-protein-FlgK	unknown	unknown	gnl\|CDD\|235895
NZ_CP009631.1\|WP_014723803.1\|977610_978732_+\|porin	unknown	unknown	gnl\|CDD\|238208
NZ_CP009631.1\|WP_041493910.1\|982243_982699_+\|DUF4810-domain-containing-protein	unknown	unknown	gnl\|CDD\|226710
NZ_CP009631.1\|WP_011886252.1\|971284_972526_+\|flagellar-hook-associated-protein-FlgL	unknown	unknown	gnl\|CDD\|236345
NZ_CP009631.1\|WP_034192573.1\|979062_979287_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009631.1\|WP_014723794.1\|986250_987843_-\|DUF3138-family-protein	unknown	unknown	gnl\|CDD\|288228
NZ_CP009631.1\|WP_041493993.1\|988777_989764_-\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|182646
NZ_CP009631.1\|WP_045578711.1\|983509_984811_-\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223737
NZ_CP009631.1\|WP_014723792.1\|989774_990929_-\|polyamine-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|183226
NZ_CP009631.1\|WP_011886235.1\|991119_992235_-\|polyamine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270377
NZ_CP009631.1\|WP_011886242.1\|982709_983384_+\|DUF799-domain-containing-protein	unknown	unknown	gnl\|CDD\|368539
NZ_CP009631.1\|WP_011886240.1\|984833_986138_-\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223737
NZ_CP009631.1\|WP_045578708.1\|974121_975006_-\|transcriptional-regulator-GcvA	unknown	unknown	gnl\|CDD\|182990
NZ_CP009631.1\|WP_014723805.1\|975102_975717_+\|chromate-transporter	unknown	unknown	gnl\|CDD\|376780
NZ_CP009631.1\|WP_011886248.1\|975713_976241_+\|chromate-transporter	unknown	unknown	gnl\|CDD\|376780
NZ_CP009631.1\|WP_014723798.1\|981509_982187_+\|CsgG/HfaB-family-protein	unknown	unknown	gnl\|CDD\|224379

Protein	Function_ID	Function_description	E-value
NZ_CP009631.1\|WP_045578709.1\|976321_977194_+\|DUF1275-domain-containing-protein	gnl\|CDD\|377734	pfam06912, DUF1275, Protein of unknown function (DUF1275). This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although most members have 6 TM regions, and may be putative permeases.	1.25719e-33
NZ_CP009631.1\|WP_011886238.1\|987941_988781_-\|ABC-transporter-permease-subunit	gnl\|CDD\|182574	PRK10592, PRK10592, putrescine transporter subunit: membrane component of ABC superfamily; Provisional.	1.16781e-105
NZ_CP009631.1\|WP_014723808.1\|972786_974094_+\|pyrimidine-permease	gnl\|CDD\|132655	TIGR03616, Putative_pyrimidine_permease_RutG, pyrimidine utilization transport protein G. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the uracil-xanthine permease family defined by TIGR00801. As well as the The Nucleobase:Cation Symporter-2 (NCS2) Family (TC 2.A.40).	0
NZ_CP009631.1\|WP_045578710.1\|979527_980883_+\|glutathione-disulfide-reductase	gnl\|CDD\|235701	PRK06116, PRK06116, glutathione reductase; Validated.	0
NZ_CP009631.1\|WP_045578707.1\|969294_971262_+\|flagellar-hook-associated-protein-FlgK	gnl\|CDD\|235895	PRK06945, flgK, flagellar hook-associated protein FlgK; Validated.	0
NZ_CP009631.1\|WP_014723805.1\|975102_975717_+\|chromate-transporter	gnl\|CDD\|376780	pfam02417, Chromate_transp, Chromate transporter. Members of this family probably act as chromate transporters. Members of this family are found in both bacteria and archaebacteria. The proteins are composed of one or two copies of this region. The alignment contains two conserved motifs, FGG and PGP.	2.31566e-30
NZ_CP009631.1\|WP_041493910.1\|982243_982699_+\|DUF4810-domain-containing-protein	gnl\|CDD\|226710	COG4259, COG4259, Uncharacterized protein conserved in bacteria [Function unknown].	1.67557e-40
NZ_CP009631.1\|WP_011886252.1\|971284_972526_+\|flagellar-hook-associated-protein-FlgL	gnl\|CDD\|236345	PRK08870, flgL, flagellar hook-associated protein FlgL; Reviewed.	1.59595e-151
NZ_CP009631.1\|WP_014723794.1\|986250_987843_-\|DUF3138-family-protein	gnl\|CDD\|288228	pfam11336, DUF3138, Protein of unknown function (DUF3138). This family of proteins with unknown function appear to be restricted to Proteobacteria.	0
NZ_CP009631.1\|WP_041493993.1\|988777_989764_-\|ABC-transporter-permease-subunit	gnl\|CDD\|182646	PRK10683, PRK10683, putrescine transporter subunit: membrane component of ABC superfamily; Provisional.	1.32734e-131
NZ_CP009631.1\|WP_045578711.1\|983509_984811_-\|FAD-binding-oxidoreductase	gnl\|CDD\|223737	COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism].	3.19906e-75
NZ_CP009631.1\|WP_014723792.1\|989774_990929_-\|polyamine-ABC-transporter-ATP-binding-protein	gnl\|CDD\|183226	PRK11607, potG, putrescine ABC transporter ATP-binding subunit PotG.	4.07942e-179
NZ_CP009631.1\|WP_011886235.1\|991119_992235_-\|polyamine-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270377	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold. This group represents the periplasmic substrate-binding domain that serves as the primary polyamine receptor of ABC-type putrescine-preferential transporter from gram-negative bacteria. Polyamine transport plays an essential role in the regulation of intracellular polyamine levels which are known to be elevated in rapidly proliferating cells and tumors. Natural polyamines are putrescine, spermindine, and spermine. They are polycations that play multiple roles in cell growth, survival and proliferation, and plant stress and disease resistance. They can interact with negatively charged molecules, such as nucleic acids, to modulate their functions. Members of this family belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	3.24473e-161
NZ_CP009631.1\|WP_011886242.1\|982709_983384_+\|DUF799-domain-containing-protein	gnl\|CDD\|368539	pfam05643, DUF799, Putative bacterial lipoprotein (DUF799). This family consists of several bacterial proteins of unknown function. Some of the family members are described as putative lipoproteins.	2.73825e-119
NZ_CP009631.1\|WP_011886240.1\|984833_986138_-\|FAD-binding-oxidoreductase	gnl\|CDD\|223737	COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism].	8.05385e-60
NZ_CP009631.1\|WP_045578708.1\|974121_975006_-\|transcriptional-regulator-GcvA	gnl\|CDD\|182990	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional.	9.49803e-150
NZ_CP009631.1\|WP_014723803.1\|977610_978732_+\|porin	gnl\|CDD\|238208	cd00342, gram_neg_porins, Porins form aqueous channels for the diffusion of small hydrophillic molecules across the outer membrane. Individual 16-strand anti-parallel beta-barrels form a central pore, and trimerizes thru mainly hydrophobic interactions at the interface. Trimers are stabilized by hytrophillic clamping of Loop L2. Loop 3 bends into the pore, creating an elliptical constriction of about 7 x 11A, large enough to allow passage of a glucose molecule without steric hindrance. Removal of the C-terminal residue (usuallly F) destabilizes the trimer and removal of the 16th beta-sheet abolishes trimerization. Unlike typical membrane proteins, porins lack long hydrophobic stretches. Short turns are found at the smooth, periplasmic end, longer irregular loops are found at the rough, extracellular end. C-terminal residue forms salt bridge with N-terminus.	1.46563e-70
NZ_CP009631.1\|WP_011886248.1\|975713_976241_+\|chromate-transporter	gnl\|CDD\|376780	pfam02417, Chromate_transp, Chromate transporter. Members of this family probably act as chromate transporters. Members of this family are found in both bacteria and archaebacteria. The proteins are composed of one or two copies of this region. The alignment contains two conserved motifs, FGG and PGP.	5.89935e-33
NZ_CP009631.1\|WP_014723798.1\|981509_982187_+\|CsgG/HfaB-family-protein	gnl\|CDD\|224379	COG1462, CsgG, Uncharacterized protein involved in formation of curli polymers [Cell envelope biogenesis, outer membrane].	2.84269e-68

>NZ_CP009631.1|WP_045578710.1|979527_980883_+|glutathione-disulfide-reductase
MDFDYDLFVIGAGSGGVRLARMSASYGARVAIAEQEQIGGTCVLRGCIPKKLLVYASHYPHELEDAQGFGWRFDAGTHDWPALIAAKDREINRLSDIYINLLRQSGVDMHAGRATLVDAHTVAVGERTFRARHIAIATGSRPSLPPRPGIEHAITSREALSLPALPGRIAVVGGGYIAVEFAGIFNGFGSRVDLFYRGERILRGFDDDVRQFLTDEMTKQGVAIHAHAVVESIARADDGTLSVQVGDATHGRYDAVLYATGRVPNVDGLGLERAGVLLDARGAIAVDAYSATSVPSIHALGDVTSRPQLTPVATRDGSLLARTLFGGARVATDHEWVPSAVFSQPEVATVGFTEAHARGVYGELDIYRTSFRSLRHTLSGRDERTLMKLVVARDSQRVVGAHMVGRDAGEIIQGIAIAIRAGATKAQFDDTIGIHPTAAEEFVTMRQKVAD
>NZ_CP009631.1|WP_034192573.1|979062_979287_+|hypothetical-protein
MGILNTVGEIAGAVAAVEAAEKVDPDAGLLTKAAAAIAGFKGAEAIEGMLEKKDEQPQQADDTQATDGSDTSQA
>NZ_CP009631.1|WP_014723803.1|977610_978732_+|porin
MKQTTRLAAIAGGAALAVASQFAEAQSSVTLWGVADASIRYLTNANAKNDGLLSMTNGAITNSRFGIYGSEDLGGGLKAVFNLESGVNLQNGAFADSGRLFNRAAYVGLQSPYGTVTLGRQKTPLFDLLADTYDPLTVGNYLENAWLPVALGGGLYADNQIKYTGTFSGLTAKAMYSTGTNYESTGAGGFSGQIPGSLGKGNAWGVSLSYVMGPLSIAAGAQQNSDNSARKQTIYHANVVYAFSKAKVYAGYLRSKDDTGFVDSLLAQQSIPVAKGTGRIDDGPFAGVSWQVSTPLTLTGAFYYDHMRNAMTANGTLASGNRYAIVGIAEYALSKRTEVYGTVDFNKTNGAANVELPGRSNQTGIAIGLRNIF
>NZ_CP009631.1|WP_045578709.1|976321_977194_+|DUF1275-domain-containing-protein
MNLDGASRNLTVAALLTLSGGYLDAYTYVGHGHVFANTMTGNVALLGINLSAGEWAAALRHVPPLGGFVVAVLVAHLLGLAAQRGWMRHTAFASLIVEIAFLGLAASGLVGASSAWLIPGITFVATLQTLSFTHLEALSYTSVMTTGNLRRAAQKLFVGLIPRYDAGALHDSALLATISFCFLGGAVCGGLVTRLAPDVALWGAVLPLVGAFAEIVRRARQRAGDPAGGAGGDGGNGSDGGNGSDSGNGSNGSNATNATNGTNGTNGTNGTNGTNGTNAAAPEYVASRRA
>NZ_CP009631.1|WP_011886248.1|975713_976241_+|chromate-transporter
MNDTLIAIATIFSQLSLLAFGGGNTILPEMQRQVVDVHHWMSAHEFTALFALAQAAPGPNMMIVSLVGWHVAGWAGLLVASIAKFGPSSIVTVLALHAWERFRDRPWRRYVQQGLMPVTAGLVAASAMLISQASNRSAIQWGITAACAVLAWRTRIHPLWLLAAGALIGLTGIGQ
>NZ_CP009631.1|WP_014723805.1|975102_975717_+|chromate-transporter
MQSVSPPPAAAPRPIGLAELFTGFLSLGLMSFGGALPFARRTIVDERKWLSADEFTDLLGLCQFLPGGNVINLSVAVGMRFRGVAGAFAGILGLIAGPTLVVVALGVLYAKTQADPHVQHLFGGLAAAAAGLLVAMAVKVARPLRQAPRTAAGIAALAFVAIAVLRVPLLPTMLVLTPVSIWLASRRRDTPAQPRAEARDGGGR
>NZ_CP009631.1|WP_045578708.1|974121_975006_-|transcriptional-regulator-GcvA
MPRDLPPFSALRAFEAAARHESFSAAGDELHVTHGAISRQIAGFEAWLGKPVFQRYGKRVKLTDDGRRYLDTVRAAFDSIALATEQLRNAGATRVLRINALPTFAMKWLLPRLSRFQRDVPNVELKLSTSNAALDTLDGFDVAIRREPGPGPNWRSGHFLDESVIPVCSPALLKRAPIARAEDLARHVLLHSDTRPEGWRDWFAAAGLTMKGRKRQSFDHFYLALQAAVDGLGVALGPLPLIDDELASGRLVMPLDGPRIATRSYWWIAPGASADDPLVAQFCAWLQGQSNTGA
>NZ_CP009631.1|WP_014723808.1|972786_974094_+|pyrimidine-permease
MSDSYFPRWRVQPAGAASRVVGPDERLAWPQMVAMGVQHVVAMFGSTVLAPLLMGFDPNLCIFMSGIGTLLFFVLVGGRVPSYLGSSFAFIGLVIAVTGYGGSGPNPNIPVALGGIVACGVVYVALGALVQAIGTRWIETLMPPVVTGAVVAVIGLNLAPIAVRGVSASTFDSVMALVTVLCVGGVAVFARGMVQRLLILVGLVIAYAIYAVATNGMGLGKPIDFSIVAHAAWFGVPRFRAPVFDPHAMLMLAPIAVILVAENLGHIKAVSAMTGTNLDRYVGRAFIGDGLATIVSGSVGGTGVTTYAENIGVMAVTRIYSTLVFALAALIAIGLGFSPKFGAVIQTIPGPVLGGVSIVVFGLIAVTGARIWVVNKVDFSDNRNLIVAAVTLVLGAGDFSLKFGGFALGGIGTATFGAIILYAILRKEKEPGPVV
>NZ_CP009631.1|WP_011886252.1|971284_972526_+|flagellar-hook-associated-protein-FlgL
MRISSAQFFQLNVSQMNDQQAQLSQLYQQIASGVSLQTPADNPVGAAQAVQLSMTSATLSQYTANQSTALASLQAEDQTLQSVSTVLTGVQTLTVRAGDGSLADSDRAALATQLQGYRDQLMTLANTNDGAGTYLFAGVNNSSAPFTSSPNGTVSYVGDSGTRQVQIGDSSSVAQGDTGAAVFMSVQSLGSVPVPAADAANTGTGRITAVTVTSPSAATNGHHFAITFGGTPAAPTYTVTDSSAKPPTTTPAQAYTAGASIALGGGMTVSVSGTPSAGDSFSVTPGPQATGGADIFSTLDSMIAALKTPVTGNPVAAAALSNAMMTGSIKVGNTMRNVTTIQASVGGREQEVKAMQAVTQTASLQTTSNLTDLTGTNMVTTISQYLQVQNALTGAQKAYVQLQNLSLFQYVNP
>NZ_CP009631.1|WP_045578707.1|969294_971262_+|flagellar-hook-associated-protein-FlgK
MSNTFMNLGVSGLNAALWGLTTTGQNISNAATPGYSVERPVYAEESGQYTASGYLPQGVNTVTVQRQYSQYLSDQLNAAQSQGGAQSTWYSLVAQLNNYVGSPTAGISTAITNYFTGLQNVANNASDPSVRQTAISNAQILADQLKATGQQYDALRQSVNTQLTSTVSQINTYTAQIAQLNQQIGAASSQGQPPNQLLDQRDLAVSNLSSLAGVQVVRNDSGYSVFLAGGQPLVVADKSYQLAAVASSSDPSELTVVSQGIAGANPKTPDQSLPDASLSGGTLGGLLAFRRQTLDPAQAQLGALATSFAAQVNAQNALGVDLSGNPGGSLFAVAPATVFANQGNTGNAALSVSFTNPAQPTTGDYTLSFDGTNYTLADRASGSVIGQSTSMPASLGGLQLSFSSGAMNAGDQFTVLPTRGALTGFGLATTSGAAIAAASPVVASASTTNIGTGKIVSNGVSSGYQIPATKLTYDAATNSLSGFPVGTTVTIAGTPPTSVTIANPTDSVPYNASQGAKMTMSGTLNGVTVTLSGAPSDGDSFSIGPYAGGTSDGDNALALSQLVTAKSLGGGTTTLTGAYANYVNAIGNTASQLKSSSAAQTSLVGQITSAQQSVSGVNQNEEAANLMQYQQLYQANAKVIQTAQTLFQTVLGLFN
>NZ_CP009631.1|WP_014723798.1|981509_982187_+|CsgG/HfaB-family-protein
MNIQTRRTVVVAAALVAALSGCATESSRTLDVPAVSSAQKPYAGKPVAIAIGKFDNRSSYMRGIFSDGIDRLGGQAKTILVTRLQQSRRFNVLDRENLDEIKQEAGFMKKAQAVKGANYVVTGDVTEFGRKDVGDHQLFGILGSGKTQVAYAKVNLNIVDTTTSEVVASSQGAGEFSLSNREVIGFGGTAGYDSTLNGKVLDLAIQEAVNHLVDQVDAGVLKATK
>NZ_CP009631.1|WP_041493910.1|982243_982699_+|DUF4810-domain-containing-protein
MKRGIWLPATAAAMLLAGCAAPTTPPLYQWNGYQPQVYEYFKGQSSPQQQIDALEKALQEIRAKGNKPPPGFHAHLGMLYASVGSEQQAGQEFEAEKALFPESASYMDFLMKKKAAPSGAATTAAASAPTPSAAGQTLAGRKNADTTSAKQ
>NZ_CP009631.1|WP_011886242.1|982709_983384_+|DUF799-domain-containing-protein
MFKTLSFKLMSVLSLVALLSACAQPVKRADYTAFKNSHPRSILVLPPINETTDVGATYGVLSQMTLPLAESGYYVVPVAVMDETFKQNGLTNAAEIQGTSPAKLREIFGADAALYTKITKYGSVYQVLDSTTVVAASAKLVDLRTGDVLWQGAGRATGKELGNNVNVNAFGLVGMLVQAAVKQIAHSLTDEAHDVAALTSNRLLSAGPPNGLLYGPHSPKYGTD
>NZ_CP009631.1|WP_045578711.1|983509_984811_-|FAD-binding-oxidoreductase
MQTFANQPHVVSYYAATVNDTTRHAPLAGATDADVCVIGAGLTGLSAALNLAERGHSVTVLEASRVGWAASGRNGGQLIGGFACDIDTFGNFMPDSDVKRIWEMGLETLSLVKARIDKHAIDCALVPGYLTAANTERDADALKRWRDEAARRFGYERLHFVEADALGDFVQSARYRGGLYDPDSGHLHPLNYTLGLARAATDAGVRIHEDSCVTRVRDVAGGHVVETAGGHVRARFVVLACNTYVGTLAPALAKKIMPVGTYVIATEPLGDARAAALMPARAAVCDSRFVLDYFRPAPDTRLVWGGKVSYSTRPPRNLAAAMRADMLKTFPQLADVKIDYAWGGFVDITMNRAPHFGRVTPTTYFAQGFSGHGVNTTALAGKLIAEAIDGQASRFDLFDKIRHRDFPGGAMLRTPALVLAMSWYRLLDAFGVH
>NZ_CP009631.1|WP_011886240.1|984833_986138_-|FAD-binding-oxidoreductase
MPQSFTRRADALAHDSYYEASVTRPPTNDPVLDGAIDVDVCVIGAGFAGLSTALECRARGLSVAVIDAHRPGWGASGRNGGQAITGFAKDGVIERQLGAAGARAAWSLSLDGVELIAERIARYAIDCDFTRGYLTVATKPRRVGDLRAWMDAARTRWGHPSLSWLDTAGIRARIASPRYLAGVHDPLSGHLHPLKYCLGLADAARREGVALHAHTPALDVARGARPVVRTPSGEVRCGFVVSCCNAGPGGILPAATAARIAPVASYIIATEPLGRARADALIAQREAVCDNNVFLDYFRLSADHRMLFGGRASSAGAPPEVLAEAIRQRMTGVFPQLADARVEHAWGGFVDVTRNRAPDFGALDRNFFYVQGFSGHGVALTGIAGRAVAAAIAGDTRAFDLFAQLRHRRFPGGDAWRQPALELGMLYHRVRELF
>NZ_CP009631.1|WP_014723794.1|986250_987843_-|DUF3138-family-protein
MKKKLICLLVAGALPGVALAGSTSAEIKALQAQVAALQKQMKAMQAQLAAQPGGAAVAHAGAAGAAGSGGTARPAIVAADPSSPDYGKAQAALTNDEVSEMKQQIANQQLKVDSLTDAATTGPLAGLSVTGYLDPTYIYNRAAGSSSFLFANHENAYNYFNSTFGDLYLDIKKTFGVGPMAPSAEITLMPNRGNGITLLQNSRGSITDNLLNTAVINVPISATTTLVAGLIPSFGGYEVQQSNQMLTLTHNLLYDFSDPGSYVGAGANYTKGNWAWKFFVGNEQYRTYGSVTQTGTNALGDPITTSNKVPTFTARADYTWSSALDLGGSINIGRQTLASAIDSNGVVHYGPGGNGGSGYGTFFFGELDATYMLADTQYNAELDYGQQQNAAYNGGLAQWYGLSLLAHRKFNAPVVGRMGVTLRYDALVNSKNGGGGGGIALNGNGMDPYNGFGVDADCLATSKANGGLGFDCKGAIRQDVALDLLFYPTQQITVKVEYRHDWANNKVFLRNDGSYGKSNDLLATQFIYSF
>NZ_CP009631.1|WP_011886238.1|987941_988781_-|ABC-transporter-permease-subunit
MIKPSKPLSTGVLAFGFLFLYIPIISLVVYSFNESKLVTVWSGFSLKWYAALLDDDELLTAAWLSLKIGLLTATASVVIGTWAGFVLARFGRFKGFTLYTGMINAPLVIPEVIQGISLLLLFVALEQMFGWPKGRGMVTIWIGHVMLCVSYVAIIVQSRVKEMNKSLEEAALDLGATPLKVFFVVTLPLISQALLSGWLLSFTLSIDDLVLSAFLSGPGSTTLPLVVFSRVRLGLNPEMNALATLFISAVTIGVIVVNQMMIARERRRVADMKAAFAAA
>NZ_CP009631.1|WP_041493993.1|988777_989764_-|ABC-transporter-permease-subunit
MRTSASTPSAPVSAGAASTGAGRARRSRFAALSRLLPSGRSVAIGVPFLWLTVFFALPFVLVFKISFADQVMSIPPYTSLVEMKDGAVHFVLQLSHYAFLLQDDLYIATYLSSLKMAAVSTLLCLLIGYPMAYYIARAEPGRRNVLMMAVMLPFWTSFLIRVYAWIGILKDDGLLNHALIALGIIHTPLRLYHSDAGVYIGMVYSYLPFMVMPLYAHLVKMDLTLLEAAYDLGAKPWVAFTRITLPLSKNGIIAGSLLVFIPAVGEYVIPELLGGADTLMIGRVMWDEFFNNMDWPMASAVTVAMVLLLLVPMALFQYYQVKELEEAK
>NZ_CP009631.1|WP_014723792.1|989774_990929_-|polyamine-ABC-transporter-ATP-binding-protein
MQSIPSSAAARQAQPAAVARSKNDAFVRIENVVKKFGDSTAVDNVNLTIAKNELFALLGSSGCGKSTLLRMLAGLETATSGKIFVDGEDLASLPPYRRPVNMMFQSYALFPHMSVESNVAFGLKQEGTPKNEIKERVADALALVQMSKYAKRKPHQLSGGQQQRVALARSLVKRPKLLLLDEPMSALDKKIRQKTQLELVNIIEKVDVTCVMVTHDQEEAMTMASRLAVMSEGKIVQIGTPGEVYEYPNSRFSAEFIGSTNLFEGRVVEDEPDHIFVESDDLEARMYVSHGVTGPLGMPVGISVRPERVNVSREKPGSHHNWARGVVTDIAYMGSYSLYHVRLPSGKTVVSNLSSSNLMRDDAPSWNDDVFVSWSPASGVVLTQ
>NZ_CP009631.1|WP_011886235.1|991119_992235_-|polyamine-ABC-transporter-substrate-binding-protein
MRACFLRQACSIAALAAAAAFTSVASPCAHADELNVYNWSDYIAPDTIPNFQKQTGIHVKYDNYDSDDTLQAKLLAGSSGYDIVVPTSNYMAKQIQAGVYQKLDKSKIPNLANLDPLLMKMIADADPGNQYGVPWAYGTDGIGYNAQAVKKALGDKAPVDSWALVFDPANMEKLKSCGVSFLDQAVDVFAATLQYMGRDPNSKNPGDYQAAFEVLKKVRPYITQFNSSGYINDLANNDVCVVLGWSGDVGIAHRRAAEAKRAYDIKFSNPKEGGLLWFDVMVVPKDAPHPEAAMKWINYVSDAKVNAAITNTVFYPTANKAAHQFVTPAVAQDPTVYPPEDVLKKMVLMKPMPADILRLENRLWAQLKTGH

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Crispr_ID: NZ_CP009631_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009631_3

2578335-2578517

Orphan

Consensus_repeat	Method
AGCCCGCTCGCGCCGGTC----------------------------ACG	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP009631_3

>merge|NZ_CP009631|3|2578335-2578517|PILER-CR
AGCCCGCTCGCGCCGCTCACCAATCTCGTGTCGACGGTCACGGGCACGCTCGGCGGAGCAACGGGCGGCGCAAGCGGGGCAAACCCGCTCGCGCCGGTCACGGGCTTGCTGAATACTGTCACCGGCGCGGTCGGCGGCGCAACGGGATCGGGGGGATCGTCGAGTCCGCTCGCGCCGGTCACG

>NZ_CP009631|3|1|2578335-2578517|PILER-CR
AGCCCGCTCGCGCCGCTCACC	AATCTCGTGTCGACGGTCACGGGCACGCTCGGCGGAGCAACGGGCGGCGCAAGCGGGGCA
AACCCGCTCGCGCCGGTCACG	GGCTTGCTGAATACTGTCACCGGCGCGGTCGGCGGCGCAACGGGATCGGGGGGATCGTCG
AGTCCGCTCGCGCCGGTCACG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009631.1\|WP_045579150.1\|2575638_2577228_+\|collagen-like-triple-helix-repeat-containing-protein	unknown	unknown	gnl\|CDD\|374271
NZ_CP009631.1\|WP_014722940.1\|2575437_2575662_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009631.1\|WP_014722932.1\|2582933_2584364_-\|dihydrolipoyl-dehydrogenase	unknown	unknown	gnl\|CDD\|235779
NZ_CP009631.1\|WP_014722934.1\|2581180_2581594_-\|transposase	unknown	unknown	gnl\|CDD\|379129
NZ_CP009631.1\|WP_045579146.1\|2569907_2571182_-\|fimbrial-protein	unknown	unknown	gnl\|CDD\|349765
NZ_CP009631.1\|WP_034195570.1\|2568539_2569904_-\|CpaF-family-protein	unknown	unknown	gnl\|CDD\|227297
NZ_CP009631.1\|WP_011884604.1\|2584445_2585723_-\|2-oxoglutarate-dehydrogenase-complex-dihydrolipoyllysine-residue-succinyltransferase	unknown	unknown	gnl\|CDD\|235571
NZ_CP009631.1\|WP_011884608.1\|2580618_2581080_+\|DUF2147-domain-containing-protein	unknown	unknown	gnl\|CDD\|378304
NZ_CP009631.1\|WP_034195576.1\|2574749_2574977_-\|Flp-family-type-IVb-pilin	unknown	unknown	gnl\|CDD\|226366
NZ_CP009631.1\|WP_045579148.1\|2572638_2573583_-\|Flp-pilus-assembly-protein-CpaB	unknown	unknown	gnl\|CDD\|274472
NZ_CP009631.1\|WP_045579147.1\|2571242_2572574_-\|type-II-and-III-secretion-system-protein-family-protein	unknown	unknown	gnl\|CDD\|227299
NZ_CP009631.1\|WP_045579152.1\|2591780_2593286_+\|efflux-transporter-outer-membrane-subunit	unknown	unknown	gnl\|CDD\|273830
NZ_CP009631.1\|WP_011884609.1\|2578766_2580452_+\|ShlB/FhaC/HecB-family-hemolysin-secretion/activation-protein	unknown	unknown	gnl\|CDD\|225387
NZ_CP009631.1\|WP_014722928.1\|2591201_2591693_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_CP009631.1\|WP_034195575.1\|2574149_2574650_-\|prepilin-peptidase	unknown	unknown	gnl\|CDD\|227295
NZ_CP009631.1\|WP_011884606.1\|2581736_2582834_-\|cell-division-protein-ZapE	unknown	unknown	gnl\|CDD\|224402
NZ_CP009631.1\|WP_011884600.1\|2589039_2590866_-\|translational-GTPase-TypA	unknown	unknown	gnl\|CDD\|224138
NZ_CP009631.1\|WP_034195574.1\|2573658_2574153_-\|pilus-assembly-protein	unknown	unknown	gnl\|CDD\|377921
NZ_CP009631.1\|WP_034195569.1\|2567560_2568547_-\|type-II-secretion-system-F-family-protein	unknown	unknown	gnl\|CDD\|227300
NZ_CP009631.1\|WP_011884602.1\|2585858_2588723_-\|2-oxoglutarate-dehydrogenase-E1-component	unknown	unknown	gnl\|CDD\|236499

Protein	Function_ID	Function_description	E-value
NZ_CP009631.1\|WP_045579150.1\|2575638_2577228_+\|collagen-like-triple-helix-repeat-containing-protein	gnl\|CDD\|374271	pfam15984, Collagen_mid, Bacterial collagen, middle region. Collagen_mid is the conserved central region of bacterial collagen triple helix repeat proteins.	8.17707e-30
NZ_CP009631.1\|WP_045579146.1\|2569907_2571182_-\|fimbrial-protein	gnl\|CDD\|349765	cd03111, CpaE-like, pilus assembly ATPase CpaE. This protein family consists of proteins similar to the cpaE protein of the Caulobacter pilus assembly and the orf4 protein of Actinobacillus pilus formation gene cluster. The function of these proteins are unkown. The Caulobacter pilus assembly contains 7 genes: pilA, cpaA, cpaB, cpaC, cpaD, cpaE and cpaF. These genes are clustered together on chromosome.	2.64088e-78
NZ_CP009631.1\|WP_014722932.1\|2582933_2584364_-\|dihydrolipoyl-dehydrogenase	gnl\|CDD\|235779	PRK06327, PRK06327, dihydrolipoamide dehydrogenase; Validated.	0
NZ_CP009631.1\|WP_014722934.1\|2581180_2581594_-\|transposase	gnl\|CDD\|379129	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096).	1.44138e-25
NZ_CP009631.1\|WP_011884608.1\|2580618_2581080_+\|DUF2147-domain-containing-protein	gnl\|CDD\|378304	pfam09917, DUF2147, Uncharacterized protein conserved in bacteria (DUF2147). This domain, found in various hypothetical prokaryotic proteins, has no known function.	1.07872e-40
NZ_CP009631.1\|WP_034195570.1\|2568539_2569904_-\|CpaF-family-protein	gnl\|CDD\|227297	COG4962, CpaF, Flp pilus assembly protein, ATPase CpaF [Intracellular trafficking and secretion].	2.06411e-158
NZ_CP009631.1\|WP_011884604.1\|2584445_2585723_-\|2-oxoglutarate-dehydrogenase-complex-dihydrolipoyllysine-residue-succinyltransferase	gnl\|CDD\|235571	PRK05704, PRK05704, 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase.	0
NZ_CP009631.1\|WP_034195576.1\|2574749_2574977_-\|Flp-family-type-IVb-pilin	gnl\|CDD\|226366	COG3847, Flp, Flp pilus assembly protein, pilin Flp [Intracellular trafficking and secretion].	1.03002e-15
NZ_CP009631.1\|WP_045579148.1\|2572638_2573583_-\|Flp-pilus-assembly-protein-CpaB	gnl\|CDD\|274472	TIGR03177, pilus_cpaB, Flp pilus assembly protein CpaB. Members of this protein family are the CpaB protein of Flp-type pilus assembly. Similar proteins include the FlgA protein of bacterial flagellum biosynthesis.	1.88144e-49
NZ_CP009631.1\|WP_045579147.1\|2571242_2572574_-\|type-II-and-III-secretion-system-protein-family-protein	gnl\|CDD\|227299	COG4964, CpaC, Flp pilus assembly protein, secretin CpaC [Intracellular trafficking and secretion].	1.37619e-101
NZ_CP009631.1\|WP_045579152.1\|2591780_2593286_+\|efflux-transporter-outer-membrane-subunit	gnl\|CDD\|273830	TIGR01845, Outer_membrane_protein_OprM, efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family. Members of this model comprise a subfamily of the Outer Membrane Factor (TCDB 1.B.17) porins. OMF proteins operate in conjunction with a primary transporter of the RND, MFS, ABC, or PET systems, and a MFP (membrane fusion protein) to tranport substrates across membranes. The complex thus formed allows transport (export) of various solutes (heavy metal cations; drugs, oligosaccharides, proteins, etc.) across the two envelopes of the Gram-negative bacterial cell envelope in a single energy-coupled step. Current data suggest that the OMF (and not the MFP) is largely responsible for the formation of both the trans-outer membrane and trans-periplasmic channels. The roles played by the MFP have yet to be determined. [Cellular processes, Detoxification, Transport and binding proteins, Porins].	4.34893e-103
NZ_CP009631.1\|WP_011884609.1\|2578766_2580452_+\|ShlB/FhaC/HecB-family-hemolysin-secretion/activation-protein	gnl\|CDD\|225387	COG2831, FhaC, Hemolysin activation/secretion protein [Intracellular trafficking and secretion].	6.90127e-72
NZ_CP009631.1\|WP_014722928.1\|2591201_2591693_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	1.55681e-24
NZ_CP009631.1\|WP_034195575.1\|2574149_2574650_-\|prepilin-peptidase	gnl\|CDD\|227295	COG4960, CpaA, Flp pilus assembly protein, protease CpaA [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion].	2.77316e-12
NZ_CP009631.1\|WP_011884606.1\|2581736_2582834_-\|cell-division-protein-ZapE	gnl\|CDD\|224402	COG1485, COG1485, Predicted ATPase [General function prediction only].	4.8598e-175
NZ_CP009631.1\|WP_011884600.1\|2589039_2590866_-\|translational-GTPase-TypA	gnl\|CDD\|224138	COG1217, TypA, Predicted membrane GTPase involved in stress response [Signal transduction mechanisms].	0
NZ_CP009631.1\|WP_034195574.1\|2573658_2574153_-\|pilus-assembly-protein	gnl\|CDD\|377921	pfam07811, TadE, TadE-like protein. The members of this family are similar to a region of the protein product of the bacterial tadE locus. In various bacterial species, the tad locus is closely linked to flp-like genes, which encode proteins required for the production of pili involved in adherence to surfaces. It is thought that the tad loci encode proteins that act to assemble or export an Flp pilus in various bacteria. All tad loci but TadA have putative transmembrane regions, and in fact the region in question is this family has a high proportion of hydrophobic amino acid residues.	5.15199e-14
NZ_CP009631.1\|WP_034195569.1\|2567560_2568547_-\|type-II-secretion-system-F-family-protein	gnl\|CDD\|227300	COG4965, TadB, Flp pilus assembly protein TadB [Intracellular trafficking and secretion].	2.31495e-38
NZ_CP009631.1\|WP_011884602.1\|2585858_2588723_-\|2-oxoglutarate-dehydrogenase-E1-component	gnl\|CDD\|236499	PRK09404, sucA, 2-oxoglutarate dehydrogenase E1 component; Reviewed.	0

>NZ_CP009631.1|WP_045579150.1|2575638_2577228_+|collagen-like-triple-helix-repeat-containing-protein
MDIQVIPHGTLRTTMIAATVAAMLSLSACGGSGSISKGISGGSSSGGGDSISTSGGGTSGGTSGSTSGSTSGSTSGSTSGSTSGSTSGSTSGTTSGTSSGTSGTSGVSSNSVGTVLASSGNIVTGVGSTVSGLGTVIAGQSLPGVNPGTTQAAGGIVQSVGGAVTALGNGLGSGLGQLGATANPVGVTVASTGNVVNQLGGAVTQTGNLVTSLGSGPLAPLAPVTGAVGGLVTTVGNAVSGGGTTLSNVLSTGPVQQLTQTVSSAITPITTMVGQTTQTIGTATGLGAPVNTLLGTIGNGLNQGGALIASTGGNPITTGLGNTVSSAGNTVKSVGGLLAGSSGGATNPLAPLTGLVSTVTGTLGGATGGGSGPLAPVTGLVSTVTGALGGAAGGGSGPLAPVTGLVSTVTGALGGATGGSGGPLAPVTGLVSTVTGALGGAAGGGSGPLAPVTGLVSTVTGALGSATGGAAGSGPLAPVTGALSTVTSAAGAPALSGATGTVTNSGSGSNLLAPVTSLIGGLLGGTHGK
>NZ_CP009631.1|WP_014722940.1|2575437_2575662_-|hypothetical-protein
MRDNLNVHFVLALKLMLCWVMRGLLCNCRAIPMATESMNRLKRANSLSQKALAVIERLLKLFKAGLRQTISRVS
>NZ_CP009631.1|WP_034195576.1|2574749_2574977_-|Flp-family-type-IVb-pilin
MKALIKRFLKEETGVTAIEYGLIAGLIAVAIVAGVSSIGGSLGNMFTNLGSCITSPTTGTGSSATANVACTAPWK
>NZ_CP009631.1|WP_034195575.1|2574149_2574650_-|prepilin-peptidase
MAHFLFTGAFLAWALVVAASDIRYRRISNVLVLAGLVAGFLAASLDANPFGVLPVRAMIGMFVGLIVLLPFFLLRVMGAADVKIFAVLGAWCGANALLWVWVAASLAAGVHVLVLMLLSRTRIRALRSRRAPVLMVGGYRATPYAACLVAPVAAWLVYLVMAGAGR
>NZ_CP009631.1|WP_034195574.1|2573658_2574153_-|pilus-assembly-protein
MNRQSAGCRKRDRQRGATAVEFAIVFPLFFMIFYAIVSFGMIFLIQQSLTFAVSEGARAGLTYAPSLGSDQNPCTSVSKPMTRTQSACNTALSSLSWLNGNPQPASVTVKTNACTDGSASPTNCLTVTVSYVPLQWLTSIPLLGQVLKGPLTSSAVVQIPQSML
>NZ_CP009631.1|WP_045579148.1|2572638_2573583_-|Flp-pilus-assembly-protein-CpaB
MTNNLTKIIAGLLIAIAVLLGIYAWMLGRSAPASVPAPQVVTANAAPVVIATHALPAGQPIPADALKVQSISPVPTGAFMDPTMVAGRVPARDIPASAPITPDALVSGLAEDIQPGERAIAVRVDETNAVGNRLRPGNFVDVFLNLKREGGGAMFDGEVSQTQARLLMSKVRVLSFGDATPERDSGSTTNGSNGQPSNARIAVLAVPTAQVDALTLGEATGRLTLALRNPRDDELAMQTVAVRTDNKLSPSALAAAGVSLQQLSGTQRNAAAANVNVPPLPSHLPPAVRSAAGATGSGGSIEVIRGGRSETVAY
>NZ_CP009631.1|WP_045579147.1|2571242_2572574_-|type-II-and-III-secretion-system-protein-family-protein
MKNTLTAFAMALWVLTFASMASASGTIELAVGAQRQIAAGRALQRVAVGDPAIADVLIMKGSRAGSVLLTAKAPGTTNVMVWERGHDEPTVWNVEVVDAAAQAVLDASTPQVKAYGGTSVLRGAAGSLDAHERAVAVAKNMSPKGAVIDRSTLAGKNVVQVDVRVVEFSRSVLKQVGFNFFKQSNGFSFGSFSPGGVQSYNGGSGPGTAAYIPTLGAPVASAFNLVVNAAGHGIFADLSLLEANNLARVLAEPTLVALSGQSASFLAGGEIPVPSPQGLGSTAIQWKQYGVGLSLTPTVLSPNRIALKVAPESSQLDFVNSVTISGVAVPGITTRRADTTVELGDGESFVIGGLIDRQTMSNVSKVPLLGDLPIIGTFFKNLNYQQNDKELLIIVTPHLVAPIAKGAVLPATPGELAEQHDGPVWRSYLGGAASPDAAPGFSK
>NZ_CP009631.1|WP_045579146.1|2569907_2571182_-|fimbrial-protein
MNARIESLCEPAVTDYFVCATQKDAHVRWLADTLVSAGAVEAASLEPGVLAQRITGLNPALVFVDFSASSDAASIAVAAIRAAHPGLPIVALGSLAQPESTLAALRAGVRDFIDVSAPAEEALRTTRGLLSNVGEPASRHGKVVALLGARAGMGVSTLAANLAVWLQKHALGPGAKDQHGGSTPAGRQTALVDLGLPAGDGALFLNTRCEFHFIDAVQNLRRIDRTFVNTALTRHQSGVALTTLPPDLGGLRDVSYAACVGLLNRFRAFFDQQVVDLGGFSNRDFVTQIAASADEAWLVCDQGVASIVSAADLLTGLRDAGIDTDRVKLVVNQYDPALDLMPAQIAERLGLSLVGTLPARRVAIGHAANQGRLIVDAAERDPYVRALESLAVRLPGISGTAGASRAAPRLSALKRFIQPSSKRS
>NZ_CP009631.1|WP_034195570.1|2568539_2569904_-|CpaF-family-protein
MAHDIQFADGAAPFSQTQQFHDIKNAAHEHLLTRIEELGAEFGRWSRQAINQFVDLEIDSFVRLRRIPLNENEVRAIAEALTKELAGFGPIEDLLADPAVEDILINGYNDVYVSRHGMLAKLPVRFTDNAHLLRIVRRILAPIGRRLDESNPMVDARLPDGGRVNVVIEPLSIDGPIVSIRKFRKDPLKPSDLLGNGTYNEEIGALLEAAVEARCNVLVSGGTSSGKTSLLNALAFHIPEPERVVTIEDTAELSLNHPHVVRLESRPGGFDGSGVVTIRDLLRNTLRMRPDRIIVGEVRGGEVLEMLQAMNTGHDGSMGTVHASSPRECLYRLEMLAGFAGFQGTESSLRRQIANAIDFIVQIGRLSNGRRRILSITEVTGLSDNIIATQELYRYEARVTPEGEEVDHWESLGIHPHSPKLARFRQTLSGGAAGGGFGGGFGGGGFGRGGGFNV
>NZ_CP009631.1|WP_034195569.1|2567560_2568547_-|type-II-secretion-system-F-family-protein
MYSAMVWVLAVAMLCVASALMLWRHAETRRVRTDAKRFIDSRLEPGARAPAQPAAASAGARTASPSGVARGAMAEAFWVQWYASAAEYLANLVNRAGIEGARGKAIGALAVLLAIAGLATHRAGVLAGLAALVCGGAMFGVWLASRIQRRRLKIVRQIPSFLDGIVRLVTLGNSVPAAFQAALLTSEEPLRGCLDHVSRMLRSGVEIDRAMLHVAKVYRTKEFELLGSVLRLSVKYGGRADVMLERMAVFMRDLEQAERELTAMSAETRLSAFVLMMLPVAIGSFVVMTNPRYLQGMWNDPGGRVLLTLAFVMQVAGSVWLYRMARLR
>NZ_CP009631.1|WP_011884609.1|2578766_2580452_+|ShlB/FhaC/HecB-family-hemolysin-secretion/activation-protein
MKSRLDSWMLLLAIAAAGGAHAQTRAAGNPLDSLPQINTPKQGPNVTVQVAPQAPQLQELLSRHLTPSTFQVEGVKSVPFDEISRRFTPLVGKDITIGQLIETANGVTKLYQERGYALSFAFVPAQTFENGVVRITVVEGYVSDVKVTGKPGAMESKIRAIAAHITADRPLRRATFERYVNTFGLLPGVSVKANVPPPQTTDGATTLELAVDRKAFNVSTGIDFNHPGVQGLITATENGLTSFGEQLSISALVPPGRDKQTYVAFSGAVPVGSSGLVTRLDASTYRGKPTDNPGLPSTVERTVKNEKLGLSASYPLLLNNQRSLLGTVSGYASHNEDRYQNTITGNSIDTRSQVRVLQMQLDYTSVSAKQVQKLSVNVAKGFNILGASKSQNTTIGGNTTSADSPISLTFVRTGATFTQTNEWPFKIGTSVSLTGQYSPDSLPTSEQISFGSTRYALGYQPGETSGDSGWGASLEVNRAFTPGWTYMKSITPYIAYDMARVYLHTGTPSPSRLSSVGIGVRFTDNRYYSLDLNIAKPVGDAPVESASRSPRVNAAFSYQLN
>NZ_CP009631.1|WP_011884608.1|2580618_2581080_+|DUF2147-domain-containing-protein
MVQLTRPLRALAVAGALLACAAPTFAQADSPVGMWQTIDDSTHAPKALVQIAEDGDGSLSGKVVKGLGANDTPDRRCTACTDERKDQLIKGMTIIKAMKKDGDHWDGGNILDPENGKVYKCKMSLEDGGQKLVVRGYIGVSLLGRSQTWVRAQ
>NZ_CP009631.1|WP_014722934.1|2581180_2581594_-|transposase
MTPYRDLTDQEWRSIVPLLPEMKPRTELRGRPLANTRAVLNGVLWVIYSGATWSAMPRRYPSYQTCHRRFKAWHDTGTLMQVMSVLYGEAGVNLCNALSARMRKHCQPDAVAVPDAAVPAYVAHGKRAAADTMELAT
>NZ_CP009631.1|WP_011884606.1|2581736_2582834_-|cell-division-protein-ZapE
MNVNEYYTRELSTRGYQSDPAQRAAVDRLQRCFDEWVEYKGRRSNAFKKLINRPDLPRGVYMWGGVGRGKSFLMDSFYAVVPVQRKTRLHFHEFMREVHRELEELKGQADPLDELARRIAKRYRLICFDEFHVSDIADAMILYRLLDRLFDNGVQFVMTSNYDPDDLYPDGLHRDRMLPAIALIKQKLDVLNVDAGVDYRQRTLAQVQMYHTPLGADADRELRRAFAKLAAVPDESPILHIEKRELKALRKADGVVWFDFATLCGGPRSQNDYLELASRFHAIVLSEVPQMSPRMASEARRFTWLIDVLYDHKVKLLMSAAVPAEQLYVEGPMANEFARTVSRIVEMQSKEYLEAPRRIVDTSLT
>NZ_CP009631.1|WP_014722932.1|2582933_2584364_-|dihydrolipoyl-dehydrogenase
MSKEFDVVVIGAGPGGYIAAIRAAQLGKTVACIEKWKNPAGALKLGGTCLNVGCIPSKALLASSEEFENTSHHLADHGITVDGVKIDVAKMLGRKDAIVEKMTSGIEFLFKKNKITWLKGHGKFTGKTDAGVQIEVSGEGEAEVVTAKNVIIATGSKARHLPNIPVDNKIVSDNEGALRFDSVPKKLAVIGAGVIGLELGSVWRRLGADVTVLEALPAFLGAADEALAKEAAKLFKKQGLDIHLGVKIGDVKTTANGVSIAYTDKDGNAQTLDADRLIVSVGRVPNTDNLGLEAIGLKANERGFIDVDDHCRTAVPNVYAIGDVVRGPMLAHKAEDEGVLVAEVIDGQKPHIDYNCIPWVIYTYPEIAWVGKTEQQLKAEGREIKSGKFPFSINGRALGMNAPDGFVKMIADAKTDELLGVHVIGANASDLIAEAVVAMEFKAASEDIARICHPHPSMSEVMREAALAVDKRSLNS
>NZ_CP009631.1|WP_011884604.1|2584445_2585723_-|2-oxoglutarate-dehydrogenase-complex-dihydrolipoyllysine-residue-succinyltransferase
MAIVEVKVPQLSESVSEATMLQWKKKPGEAVAQDEILIELETDKVVLEVPAPAAGVLAQVLQNDGDTVVADQVIATIDTEAKAGAAQAAAGAAEVQPAAAPAAAAPAAQPAAATASSSAAASPAAAKLLAEKGLSTGDVAGSGRDGRVTKGDALAAGSAPKAAPAAAPAKTAAAKPSLPEVKVPASATTWLNDRPEQRVPMSRLRARIAERLLESQQTNAILTTFNEVNMQPVMDLRAKYKDKFEKEHGVKLGFMSFFVKAAVHALKKFPLVNASIDGNDIVYHGYFDIGIAVGSPRGLVVPILRNADQLSLAEIEKKIAEFGQKAKDGKLSIEEMTGGTFSISNGGVFGSMLSTPIINPPQSAILGVHATKERPVVENGQIVIRPINYLALSYDHRIIDGREAVLSLVAMKDALEDPARLLLDL
>NZ_CP009631.1|WP_011884602.1|2585858_2588723_-|2-oxoglutarate-dehydrogenase-E1-component
MSDVMKQFQLNSYLFGGNASYVEELYDAYLNNPASVPENWREYFDALQNVPATDGSNANDVAHYPIVESFAERAKANAFIPRESGSNLATARKQVHVQSLISAYRFLGSQWANLDPLKRRERPAIPELEPAFYDFSEGDLDQTYSASNLYFGFDQASLRDIVKGLRDTYCGTIGAEYMYISDPEQKRWWQERLESTRATPAFSADKKKHILNRLTAAEGLERYLHTKYVGQKRFSLEGGESFIAAMDEVVQHAGKSGVQEIIIGMAHRGRLNVLVNTLGKMPADLFAEFEGKHVDDLPAGDVKYHKGFSSDVSTEGGPVHLSLAFNPSHLEIVNPVVEGSAKARMDRRGDDDGLQVLPVQIHGDAAFAGQGVVMETLNLAQTRGYGTHGTLHIVINNQIGFTTSDPRDARSTLYCTDVVKMIEAPVLHVNGDDPEAVVLAIQIAIDYRMQFHKDVVIDIVCFRKLGHNEQDTPAVTQPLMYKKIAQHPGTRALYAEKLVQQGVITAEDADGYVKAYRKAMDDGHHTVDPVLSNYKSKYAVDWVPFLNRKWTDAADTAVPLAELKRLGERITTVPENFKVHPLVERVINDRRNMARGDQPLDWGMGEHLAFASLVASGYAVRLTGQDSGRGTFTHRHAVLHDQNRERWNDGTYVPLQNIAEGQAKFTVIDSVLSEEAVLGFEYGYSTAEPNTLVLWEAQFGDFVNGAQVVIDQFISSGEVKWGRVSGLTMLLPHGYEGQGPEHSSTRIERFLQLCADHNMQVVQPTTPAQIFHLLRRQMIRLFRKPLIIATPKSLLRHKEAVSDLSELAKGSFQPVLGETDGGIDPKKVKRVLACSGRVYYDLVAHRREAKANDVAIIRIEQLYPFAHKQFEAEMKKYEHATEVVWVQDEPQNQGPWFYVEHHLKEGMKEGQKLAYSGRPASASPAVGYYAKHYEQQKALIEGAFGRLKSTSIAK
>NZ_CP009631.1|WP_011884600.1|2589039_2590866_-|translational-GTPase-TypA
MTRALRNIAIIAHVDHGKTTLVDQLLRQSGTFRENQQIAERVMDSNDIEKERGITILAKNCAVEYEGTHINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVINKIDRPGARIDWVINQTFDLFDKLGATEEQLDFPIVYASGLNGYASLDPATREGDMRPLFEAILAHVPVRPADPEAPLQLQITSLDYSTYVGRIGVGRITRGRIKPGQPVVMRFGPEGEVLNRKINQVLSFKGLERVQVESAEAGDIVLINGIEDVGIGATICAVDTPEALPMITVDEPTLTMNFLVNSSPLAGREGKFVTSRQIRDRLMKELNHNVALRVKDTGDETVFEVSGRGELHLTILVENMRREGYELAVSRPRVVMQEIDGVKHEPYELLTVDVEDEHQGGVMEELGRRKGEMLDMASDGRGRTRLEYRISARGLIGFQSEFLTLTRGTGLMSHIFDSYAPVKEGSVFERRNGVLISQDDGAAVAYALWKLQDRGRMFVKPGDALYEGMIIGIHSRDNDLVVNPIKGKQLTNVRASGTDEAVRLVPPVQMSLEYAVEFIDDDELVEVTPQSIRLRKRFLKEHERRRASREGAVD
>NZ_CP009631.1|WP_014722928.1|2591201_2591693_+|MarR-family-transcriptional-regulator
MSDSPSQSPVSPLSSYQINDSVGYLMSRVKSVMTNLVTQRTQEELGITGTQASMLFMIAVGKCSTAAELAREYGIDASAVTRLLDRVEKRGLLSRVRSIEDRRVVRLELTDEGRALAERLPPVFRSVLDELLEGFTPEEVGFLKSMLRRILSNYCENAGNSIT
>NZ_CP009631.1|WP_045579152.1|2591780_2593286_+|efflux-transporter-outer-membrane-subunit
MKSSTLSVRAGSCRTAVAAAVAALALAGCANYIGIKSDKQIAPASQFESAQSLPAQGGQWPTLDWASQFGDPQLPKLIDEALQGNPSIAQAQARIAKASSYIESSRSNLMPKAEASYSWTRELYSSNALFPPPYGGQWYSENNVLASASWDLDLWGKNRERLHTAVSQEKAAEADMQQARITLASSVARTYNSLAQLYALRDIAQREITNRQTVGKITDGRVSAGLDTNVERQTARGNIATTQASLSDLDGQITTVRYQLAALLGKGPDRGLQIAAPVMNPSGAVALPGNLPADLVARRPDIVAARWQVEAAMHDVKEAKAEFFPDVNLAAGFGFDAFGWGKFLNFASRQAQFGPAIHLPIFDAGALRAQLKGRYADFDLSVANYNQTLIGALNDVATQVASIRAVDRQMDDAQRALDASTRAYDLAVIRYKAGLSPQLQVLTADSNRLASEQTVTNLKMRRRDMQLALIKALGGGFDATGTRLAAPDAEQQKTQTKQAAN

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP009631_1	1.1\|18516\|41\|NZ_CP009631\|CRISPRCasFinder	18516-18556	41	NZ_CP039340	Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence	223412-223452	9	0.78
NZ_CP009631_1	1.1\|18516\|41\|NZ_CP009631\|CRISPRCasFinder	18516-18556	41	NZ_CP039340	Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence	223541-223581	9	0.78
NZ_CP009631_2	2.2\|981074\|31\|NZ_CP009631\|CRISPRCasFinder	981074-981104	31	NZ_CP025613	Niveispirillum cyanobacteriorum strain TH16 plasmid unnamed1, complete sequence	384995-385025	10	0.677

1. spacer 1.1|18516|41|NZ_CP009631|CRISPRCasFinder matches to NZ_CP039340 (Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence) position: , mismatch: 9, identity: 0.78

caccagcgttgcccaatgcgccggtcaccgtgccgagtgct	CRISPR spacer
cgccgacgttgcccagagcgccggtcaccgtgccgaccacg	Protospacer
*.**..*********. ******************* ..*

2. spacer 1.1|18516|41|NZ_CP009631|CRISPRCasFinder matches to NZ_CP039340 (Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence) position: , mismatch: 9, identity: 0.78

caccagcgttgcccaatgcgccggtcaccgtgccgagtgct	CRISPR spacer
cgccgacgttgcccagagcgccggtcaccgtgccgaccacg	Protospacer
*.**..*********. ******************* ..*

3. spacer 2.2|981074|31|NZ_CP009631|CRISPRCasFinder matches to NZ_CP025613 (Niveispirillum cyanobacteriorum strain TH16 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.677

atccgacccatccatcgcatccgacccatcc	CRISPR spacer
tgccgacacatccatcgcatcggacgtggtg	Protospacer
  ***** ************* *** .. .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 2257

Escherichia_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045578486.1\|290_1184_-	glucose-1-phosphate thymidylyltransferase RfbA	A0A291LA53	Escherichia_phage	1.3e-97	58.8
WP_045578487.1\|1195_2257_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	7.1e-87	48.0

DBSCAN-SWA_2

5669 : 6701

Only_Syngen_Nebraska_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045578490.1\|5669_6701_-	aspartate carbamoyltransferase catalytic subunit	A0A1J0F9B8	Only_Syngen_Nebraska_virus	2.5e-28	33.7

DBSCAN-SWA_3

11331 : 13312

Vibrio_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011883504.1\|11331_12972_-	chaperonin GroEL	A0A2I7SAK5	Vibrio_phage	1.9e-171	62.8
WP_045578492.1\|13018_13312_-	co-chaperone GroES	A0A221S4A8	uncultured_virus	1.9e-18	42.6

DBSCAN-SWA_4

21367 : 22807

Mycobacterium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045578497.1\|21367_22807_+	DHA2 family efflux MFS transporter permease subunit	A0A0M3UL24	Mycobacterium_phage	1.9e-58	40.6

DBSCAN-SWA_5

34276 : 46866

Acinetobacter_phage(60.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045578499.1\|34276_34930_-	xanthine dehydrogenase accessory protein XdhC	A0A0P0IKN7	Acinetobacter_phage	4.4e-23	40.5
WP_045578500.1\|35017_37390_-	xanthine dehydrogenase molybdopterin binding subunit	A0A0P0I429	Acinetobacter_phage	2.7e-235	55.3
WP_045578501.1\|37408_39007_-	xanthine dehydrogenase small subunit	A0A0P0IVM8	Acinetobacter_phage	3.3e-128	50.8
WP_011883456.1\|39377_40592_+	MFS transporter	NA	NA	NA	NA
WP_014722528.1\|40917_41808_-	EamA family transporter	NA	NA	NA	NA
WP_034194478.1\|41941_42877_+	helix-turn-helix transcriptional regulator	A0A291LAM3	Bordetella_phage	1.4e-14	42.7
WP_014722525.1\|42933_44145_-	alanine--glyoxylate aminotransferase family protein	NA	NA	NA	NA
WP_045578502.1\|44850_45837_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_014722522.1\|45867_46866_+	2-hydroxyacid dehydrogenase	M1I636	Acanthocystis_turfacea_Chlorella_virus	1.9e-62	43.3

DBSCAN-SWA_6

67384 : 68632

Aeromonas_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014722503.1\|67384_68632_-	serine hydroxymethyltransferase	A0A219YCZ0	Aeromonas_phage	3.1e-94	50.9

DBSCAN-SWA_7

79663 : 95080

Wolbachia_phage(12.5%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045578514.1\|79663_81682_+	DNA mismatch repair endonuclease MutL	A0A1B2LRQ5	Wolbachia_phage	3.9e-78	31.5
WP_045578515.1\|81678_82653_+\|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	NA	NA	NA	NA
WP_011883373.1\|82679_83060_-	nuclear transport factor 2 family protein	NA	NA	NA	NA
WP_011883372.1\|83167_84223_-	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	1.1e-71	45.9
WP_162471374.1\|84315_84468_+	hypothetical protein	NA	NA	NA	NA
WP_072465473.1\|84422_85208_+	DnaA regulatory inactivator Hda	NA	NA	NA	NA
WP_011883370.1\|85219_85897_+	HAD-IB family hydrolase	NA	NA	NA	NA
WP_045578516.1\|85902_87462_+	polynucleotide adenylyltransferase PcnB	A0A1B0V011	Roseobacter_phage	1.7e-17	27.6
WP_034194455.1\|87495_88038_+	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA
WP_014722489.1\|88034_88721_+	deoxynucleoside kinase	A0A0M3UL55	Enterococcus_phage	3.6e-07	29.5
WP_014722488.1\|88768_89584_+	3-methyl-2-oxobutanoate hydroxymethyltransferase	A0A0N7HVJ8	Ostreococcus_lucimarinus_virus	3.7e-35	32.5
WP_045578517.1\|89675_91730_-	bifunctional anthranilate synthase component I family protein/class IV aminotransferase	S4VT78	Pandoravirus	4.9e-52	34.2
WP_011883359.1\|91734_92871_-	molecular chaperone DnaJ	A0A1V0SBY2	Catovirus	2.2e-22	27.2
WP_011883357.1\|93127_95080_-	molecular chaperone DnaK	A0A1V0SH73	Hokovirus	7.0e-149	50.1

DBSCAN-SWA_8

109734 : 113584

Acanthocystis_turfacea_chlorella_virus(50.0%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_034194448.1\|109734_110562_+	carbon-nitrogen hydrolase family protein	A7K8C9	Acanthocystis_turfacea_chlorella_virus	2.6e-12	26.1
WP_011883338.1\|110648_112115_+\|protease	metalloprotease TldD	NA	NA	NA	NA
WP_011883337.1\|112510_113584_+	3-deoxy-7-phosphoheptulonate synthase AroG	A0A2I6UFP9	Klebsiella_phage	7.2e-79	48.2

DBSCAN-SWA_9

124203 : 124692

Lake_Baikal_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011883325.1\|124203_124692_-	non-specific DNA-binding protein DpsA	A0A2H4N7L5	Lake_Baikal_phage	6.2e-22	37.6

DBSCAN-SWA_10

127752 : 128712

Lactobacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011883322.1\|127752_128712_-	LysR family transcriptional regulator	A0A2P0ZL89	Lactobacillus_phage	3.5e-08	25.2

DBSCAN-SWA_11

132587 : 137449

uncultured_Mediterranean_phage(100.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_034194442.1\|132587_133781_+\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	1.5e-85	46.3
WP_011883318.1\|134028_134352_+	preprotein translocase subunit YajC	A0A1B1IVR5	uncultured_Mediterranean_phage	4.6e-13	43.3
WP_011883317.1\|134458_136480_+	protein translocase subunit SecD	NA	NA	NA	NA
WP_011883316.1\|136498_137449_+	protein translocase subunit SecF	A0A1B1IVP7	uncultured_Mediterranean_phage	1.4e-41	35.1

DBSCAN-SWA_12

162949 : 167197

Prochlorococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011883293.1\|162949_164515_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	3.2e-67	47.1
WP_011883292.1\|164666_165209_+	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA
WP_011883291.1\|165426_166008_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA
WP_011883290.1\|166129_167197_+	Holliday junction branch migration DNA helicase RuvB	A0A127AWE7	Bacillus_phage	1.2e-09	27.0

DBSCAN-SWA_13

172046 : 172418

Lake_Baikal_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011883284.1\|172046_172418_-	iron-sulfur cluster insertion protein ErpA	A0A2H4N7M3	Lake_Baikal_phage	7.3e-31	57.8

DBSCAN-SWA_14

184683 : 185409

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011883277.1\|184683_185409_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.8e-31	39.4

DBSCAN-SWA_15

191098 : 192487

Bodo_saltans_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011883271.1\|191098_192487_+	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	3.0e-109	46.6

DBSCAN-SWA_16

198869 : 204580

Streptococcus_phage(50.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011883264.1\|198869_200141_-	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	5.7e-83	44.1
WP_011883263.1\|200279_201374_-	DNA polymerase III subunit delta	NA	NA	NA	NA
WP_014722440.1\|201392_201947_-	hypothetical protein	NA	NA	NA	NA
WP_034194161.1\|201985_204580_-\|tRNA	leucine--tRNA ligase	A0A2H4PQS0	Staphylococcus_phage	2.9e-174	39.3

DBSCAN-SWA_17

216854 : 217271

Tupanvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011883248.1\|216854_217271_+	VOC family protein	A0A2K9L5C5	Tupanvirus	1.7e-12	34.9

DBSCAN-SWA_18

223650 : 224151

Pseudomonas_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011883241.1\|223650_224151_+	CinA family protein	B5TK85	Pseudomonas_phage	3.7e-30	48.4

DBSCAN-SWA_19

228345 : 231819

Staphylococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014722425.1\|228345_229857_-	L-arabinose ABC transporter ATP-binding protein AraG	A0A2H4PQG7	Staphylococcus_phage	2.3e-14	28.5
WP_045578538.1\|229932_230928_-	arabinose ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_045579407.1\|231039_231819_-	SDR family oxidoreductase	W8CYX9	Bacillus_phage	1.0e-10	43.0

DBSCAN-SWA_20

253313 : 257878

Pseudomonas_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011883210.1\|253313_254525_-	ribonucleotide-diphosphate reductase subunit beta	A0A2H4P762	Pseudomonas_phage	7.4e-32	27.7
WP_011883209.1\|254887_257878_-	ribonucleoside-diphosphate reductase subunit alpha	A0A2H4P767	Pseudomonas_phage	2.2e-170	44.2

DBSCAN-SWA_21

266278 : 270590

Streptococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045578546.1\|266278_267397_-	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	2.4e-61	44.2
WP_011883198.1\|267486_268599_-	GTPase ObgE	NA	NA	NA	NA
WP_006476999.1\|268784_269048_-	50S ribosomal protein L27	NA	NA	NA	NA
WP_006025184.1\|269072_269384_-	50S ribosomal protein L21	NA	NA	NA	NA
WP_011883197.1\|269594_270590_+	polyprenyl synthetase family protein	A0A1V0SE37	Indivirus	6.3e-05	24.0

DBSCAN-SWA_22

279743 : 280202

Rhizoctonia_fumigata_mycovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011883188.1\|279743_280202_-	NUDIX domain-containing protein	A0A0B5CYJ3	Rhizoctonia_fumigata_mycovirus	2.9e-05	35.8

DBSCAN-SWA_23

287249 : 287756

Pelagibacter_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014722392.1\|287249_287756_-	peroxiredoxin	M1I839	Pelagibacter_phage	1.3e-27	45.6

DBSCAN-SWA_24

308311 : 312197

Staphylococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014722384.1\|308311_309985_-	long-chain fatty acid--CoA ligase	A0A2H4PQM9	Staphylococcus_phage	5.8e-35	26.8
WP_011883165.1\|310121_312197_-	molybdopterin oxidoreductase family protein	A0A077SK27	Escherichia_phage	6.3e-47	24.9

DBSCAN-SWA_25

328642 : 334144

Acinetobacter_phage(60.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011883154.1\|328642_330136_+	anthranilate synthase component I	S4VT78	Pandoravirus	1.3e-38	30.7
WP_011883153.1\|330149_330749_+	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	1.7e-69	61.1
WP_011883152.1\|330762_331794_+	anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	1.4e-79	46.4
WP_011883151.1\|331823_332609_+	indole-3-glycerol phosphate synthase TrpC	A0A0P0IR83	Acinetobacter_phage	2.9e-53	46.7
WP_045578555.1\|332608_333235_+	CYTH domain-containing protein	NA	NA	NA	NA
WP_045578556.1\|333247_334144_+	uracil-DNA glycosylase	A0A140FAU2	Suid_alphaherpesvirus	2.6e-50	50.4

DBSCAN-SWA_26

342910 : 416799

Acinetobacter_phage(14.29%)

transposase,plate,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014722364.1\|342910_344578_+	energy-dependent translational throttle protein EttA	A0A2K9L0W2	Tupanvirus	6.4e-42	27.5
WP_011883140.1\|344709_345333_-	HAD-IA family hydrolase	NA	NA	NA	NA
WP_014722362.1\|345329_345881_-	isochorismatase family protein	NA	NA	NA	NA
WP_011883138.1\|345955_347770_-	aminopeptidase P family protein	A0A0P0I8D7	Acinetobacter_phage	3.0e-170	50.0
WP_011883137.1\|347788_348043_-	hypothetical protein	NA	NA	NA	NA
WP_011883136.1\|348219_348936_+	response regulator transcription factor	NA	NA	NA	NA
WP_011883135.1\|349007_350306_+\|tRNA	glutamyl-tRNA reductase	NA	NA	NA	NA
WP_014722360.1\|350386_351469_+	peptide chain release factor 1	A0A0S4KWG0	Pseudomonas_phage	6.7e-08	46.6
WP_045578560.1\|351476_352319_+	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA
WP_011883132.1\|352386_352698_+	Grx4 family monothiol glutaredoxin	NA	NA	NA	NA
WP_011883131.1\|352710_353307_+	UbiX family flavin prenyltransferase	NA	NA	NA	NA
WP_011883130.1\|353531_354323_+	dioxygenase	NA	NA	NA	NA
WP_011883129.1\|354429_356028_-	APC family permease	NA	NA	NA	NA
WP_006477070.1\|356447_356651_+	cold-shock protein	A0A2H4N7Y6	Lake_Baikal_phage	1.4e-20	71.6
WP_045578561.1\|356773_358024_-	Hsp70 family protein	NA	NA	NA	NA
WP_011883127.1\|358304_358910_-	nitroreductase family protein	NA	NA	NA	NA
WP_011883126.1\|359316_360603_-	MFS transporter	NA	NA	NA	NA
WP_045578562.1\|360820_361444_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_045579409.1\|361526_362117_+	DUF1415 domain-containing protein	NA	NA	NA	NA
WP_011883123.1\|362181_363072_-	SAM-dependent methyltransferase	NA	NA	NA	NA
WP_034193980.1\|363161_364295_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_014722351.1\|364389_364884_-	LEA type 2 family protein	NA	NA	NA	NA
WP_034193981.1\|365529_367698_+	peptidase M1	A0A0P0IY26	Acinetobacter_phage	4.5e-48	25.7
WP_011883118.1\|367814_368843_-	transporter	NA	NA	NA	NA
WP_034193983.1\|369022_370009_-	hypothetical protein	NA	NA	NA	NA
WP_014722348.1\|370130_370976_+	M15 family metallopeptidase	NA	NA	NA	NA
WP_011883115.1\|371277_375219_+	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_011883114.1\|375215_376205_+	type VI secretion system-associated protein TagF	NA	NA	NA	NA
WP_045578563.1\|376209_377169_+	OmpA family protein	NA	NA	NA	NA
WP_045578564.1\|377310_377886_+	hypothetical protein	NA	NA	NA	NA
WP_011883111.1\|378085_379207_-	type VI secretion system protein TssA	NA	NA	NA	NA
WP_014722343.1\|379246_381919_-	type VI secretion system ATPase TssH	A0A223W0B1	Agrobacterium_phage	5.9e-90	32.1
WP_011883109.1\|381957_383058_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_045578565.1\|383021_384857_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_011883107.1\|384934_385420_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_011883106.1\|385482_385986_-	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_011883105.1\|386056_387547_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_045578566.1\|387562_388078_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_011883103.1\|388132_388768_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_172820452.1\|389153_389753_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_011883101.1\|389855_391202_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_011883100.1\|391198_391981_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_014722338.1\|392073_392391_-	hypothetical protein	NA	NA	NA	NA
WP_059606722.1\|393047_394283_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_011883097.1\|395638_395968_-	hypothetical protein	NA	NA	NA	NA
WP_045578569.1\|395967_400620_-	RHS domain-containing protein	A0A2H4JFP5	uncultured_Caudovirales_phage	1.6e-45	48.4
WP_045578570.1\|400670_403850_-	type VI secretion system tip protein VgrG	A0A2H4JCD4	uncultured_Caudovirales_phage	1.9e-58	27.3
WP_155753930.1\|403848_404139_+	hypothetical protein	NA	NA	NA	NA
WP_014722334.1\|404164_404965_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_144410644.1\|405320_405989_+	hypothetical protein	NA	NA	NA	NA
WP_144410645.1\|406039_406444_+	hypothetical protein	NA	NA	NA	NA
WP_045578571.1\|406685_407213_+	PAAR domain-containing protein	A4JWV5	Burkholderia_virus	6.0e-55	60.3
WP_045578572.1\|407209_407950_+	VRR-NUC domain-containing protein	A4JWV4	Burkholderia_virus	1.4e-44	46.3
WP_045578573.1\|407954_409073_+	DUF3396 domain-containing protein	E5E3X7	Burkholderia_phage	4.4e-180	83.9
WP_045578574.1\|409270_411604_-	SEC-C domain-containing protein	NA	NA	NA	NA
WP_045578575.1\|411828_414483_+	AAA family ATPase	A0A1B1IUG5	uncultured_Mediterranean_phage	4.4e-53	28.1
WP_045578576.1\|415000_416029_+\|transposase	IS21 family transposase	A0A2L1IVA1	Escherichia_phage	4.8e-72	44.1
WP_011881749.1\|416025_416799_+	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	1.6e-80	57.2

DBSCAN-SWA_27

424050 : 435689

Pseudomonas_phage(40.0%)

protease,integrase

attL 427335:427349|attR 436859:436873

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011883081.1\|424050_426522_-	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	2.8e-150	43.0
WP_131753408.1\|426862_427561_+	DNA-binding protein	NA	NA	NA	NA
427335:427349	attL	NA	NA	NA	NA
WP_011883078.1\|427684_427891_+	AlpA family phage regulatory protein	E5E3Y1	Burkholderia_phage	3.7e-08	56.0
WP_045578578.1\|427887_428421_+	hypothetical protein	NA	NA	NA	NA
WP_011883076.1\|428733_428910_+	hypothetical protein	NA	NA	NA	NA
WP_011883075.1\|428902_429205_+	hypothetical protein	NA	NA	NA	NA
WP_038785424.1\|429197_429410_+	hypothetical protein	NA	NA	NA	NA
WP_011883074.1\|429402_429750_+	hypothetical protein	NA	NA	NA	NA
WP_011883073.1\|429760_430087_+	hypothetical protein	NA	NA	NA	NA
WP_043290731.1\|430214_433076_+	DUF927 domain-containing protein	A0A1B0VP75	Pseudomonas_phage	1.1e-70	35.6
WP_045578579.1\|433695_434913_-\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	5.1e-89	43.0
WP_014722317.1\|435182_435689_-\|protease	ClpXP protease specificity-enhancing factor	A0A1S5R3H3	Pseudomonas_phage	7.1e-21	52.0
436859:436873	attR	NA	NA	NA	NA

DBSCAN-SWA_28

440236 : 442373

uncultured_Mediterranean_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011883065.1\|440236_441445_+	Do family serine endopeptidase	A0A1B1IRD3	uncultured_Mediterranean_phage	1.2e-10	33.6
WP_011883064.1\|441590_442373_-	twin-arginine translocase subunit TatC	A0A1B1IVR7	uncultured_Mediterranean_phage	6.1e-27	29.9

DBSCAN-SWA_29

454306 : 455233

Cedratvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011883049.1\|454306_455233_-	ABC transporter ATP-binding protein	A0A1M7XV31	Cedratvirus	2.6e-21	32.4

DBSCAN-SWA_30

458785 : 459607

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011883043.1\|458785_459607_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	6.8e-21	28.9

DBSCAN-SWA_31

474975 : 476861

Paramecium_bursaria_Chlorella_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045578588.1\|474975_475740_-	glycerophosphodiester phosphodiesterase	M1HTS7	Paramecium_bursaria_Chlorella_virus	3.5e-11	24.8
WP_011883031.1\|475775_476861_-	sn-glycerol-3-phosphate import ATP-binding protein UgpC	G9BWD6	Planktothrix_phage	8.1e-22	34.7

DBSCAN-SWA_32

516115 : 531330

Klosneuvirus(20.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011882996.1\|516115_517306_-	elongation factor Tu	A0A1V0SLW6	Klosneuvirus	3.1e-14	28.3
WP_011883003.1\|517348_519451_-	elongation factor G	E4ZFJ7	Streptococcus_phage	3.4e-56	26.9
WP_006477195.1\|519573_520044_-	30S ribosomal protein S7	NA	NA	NA	NA
WP_006400662.1\|520216_520597_-	30S ribosomal protein S12	NA	NA	NA	NA
WP_034194839.1\|520868_522719_-	DNA helicase RecQ	F2NZ48	Diadromus_pulchellus_ascovirus	2.3e-72	40.2
WP_011883001.1\|522960_527202_-	DNA-directed RNA polymerase subunit beta'	A0A2I7QNZ7	Vibrio_phage	2.3e-72	28.0
WP_011883000.1\|527223_531330_-	DNA-directed RNA polymerase subunit beta	A0A0N9R0J7	Chrysochromulina_ericina_virus	5.6e-23	27.6

DBSCAN-SWA_33

535331 : 536522

Klosneuvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011882996.1\|535331_536522_-	elongation factor Tu	A0A1V0SLW6	Klosneuvirus	3.1e-14	28.3

DBSCAN-SWA_34

560720 : 561407

Pandoravirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_006752465.1\|560720_561407_+	orotate phosphoribosyltransferase	S4VS55	Pandoravirus	2.7e-15	28.6

DBSCAN-SWA_35

574451 : 575150

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014722258.1\|574451_575150_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.0e-37	40.0

DBSCAN-SWA_36

586102 : 588672

Synechococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014722250.1\|586102_586714_-	septal ring lytic transglycosylase RlpA family protein	F5B3X9	Synechococcus_phage	5.6e-20	57.5
WP_011882935.1\|587371_588016_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_011882934.1\|588012_588672_+	exonuclease	A0A2L0UZL4	Agrobacterium_phage	4.8e-33	39.2

DBSCAN-SWA_37

600372 : 601791

Pandoravirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011882922.1\|600372_601791_-	adenosylhomocysteinase	S4VPF6	Pandoravirus	4.4e-44	30.1

DBSCAN-SWA_38

613359 : 618596

Bacillus_thuringiensis_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_006754880.1\|613359_613755_-	chemotaxis response regulator CheY	Q56AR1	Bacillus_thuringiensis_phage	2.1e-07	31.9
WP_011882911.1\|613822_614914_-	chemotaxis response regulator protein-glutamate methylesterase	NA	NA	NA	NA
WP_011882910.1\|614919_615660_-	chemoreceptor glutamine deamidase CheD	NA	NA	NA	NA
WP_011882909.1\|615659_616640_-	chemotaxis protein CheR	NA	NA	NA	NA
WP_045578609.1\|616643_618596_-	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	7.5e-10	45.6

DBSCAN-SWA_39

644318 : 647114

Organic_Lake_phycodnavirus(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045578622.1\|644318_644960_-	hypothetical protein	F2Y1U7	Organic_Lake_phycodnavirus	5.5e-34	37.9
WP_106919311.1\|645877_647114_+\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	1.1e-160	98.2

DBSCAN-SWA_40

650398 : 652486

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011882856.1\|650398_652486_-	UvrD-helicase domain-containing protein	A7KV33	Bacillus_phage	1.1e-102	35.5

DBSCAN-SWA_41

658454 : 661382

Prochlorococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011882850.1\|658454_661382_+	aminomethyl-transferring glycine dehydrogenase	M4QFZ1	Prochlorococcus_phage	1.2e-256	51.3

DBSCAN-SWA_42

681842 : 684407

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045578631.1\|681842_684407_-	heavy metal translocating P-type ATPase	E4ZFI9	Streptococcus_phage	1.9e-133	45.6

DBSCAN-SWA_43

702700 : 704428

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045578638.1\|702700_704428_-	AMP-binding protein	A0A2H4PQM9	Staphylococcus_phage	1.4e-31	30.8

DBSCAN-SWA_44

713967 : 715672

Bifidobacterium_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011882807.1\|713967_714861_-	ParB/RepB/Spo0J family partition protein	I3NLC2	Bifidobacterium_phage	1.3e-17	38.0
WP_011882806.1\|714892_715672_-	ParA family protein	Q8JL10	Natrialba_phage	2.1e-19	33.9

DBSCAN-SWA_45

718846 : 721386

Pithovirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045578641.1\|718846_719602_-	ABC transporter ATP-binding protein	W5SAS9	Pithovirus	3.4e-11	26.0
WP_011882802.1\|719601_721386_-	branched-chain amino acid ABC transporter ATP-binding protein/permease	A0A2R8FG22	Brazilian_cedratvirus	2.1e-14	26.9

DBSCAN-SWA_46

728845 : 731764

Staphylococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011882795.1\|728845_729625_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	3.2e-12	24.4
WP_011882794.1\|730078_731764_-	GMC family oxidoreductase N-terminal domain-containing protein	A0A1V0S9M4	Catovirus	2.3e-55	30.3

DBSCAN-SWA_47

747653 : 749975

Burkholderia_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_006401505.1\|747653_747932_+	HU family DNA-binding protein	A4JWM7	Burkholderia_virus	1.1e-20	61.8
WP_011882778.1\|748072_749383_-	GTP-binding protein	NA	NA	NA	NA
WP_014722145.1\|749528_749975_-	lytic transglycosylase domain-containing protein	A0A0K2QQJ4	Ralstonia_phage	2.3e-15	39.3

DBSCAN-SWA_48

774937 : 775735

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011882749.1\|774937_775735_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.6e-30	35.3

DBSCAN-SWA_49

780521 : 785566

Erysipelothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014722124.1\|780521_782540_+	site-specific DNA-methyltransferase	A0A2K5B255	Erysipelothrix_phage	2.0e-82	32.5
WP_045578657.1\|782539_785566_+	DEAD/DEAH box helicase family protein	A0A2K5B256	Erysipelothrix_phage	3.5e-171	37.7

DBSCAN-SWA_50

807058 : 807856

Escherichia_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045578667.1\|807058_807856_+	ATP-binding protein	A0A2L1IVB6	Escherichia_phage	7.5e-33	37.2

DBSCAN-SWA_51

813395 : 814226

uncultured_marine_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045578670.1\|813395_814226_+	phosphoadenosine phosphosulfate reductase family protein	A0A0F7L647	uncultured_marine_virus	1.0e-24	35.1

DBSCAN-SWA_52

819195 : 826091

Bacillus_virus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011882717.1\|819195_821670_-	DNA topoisomerase (ATP-hydrolyzing) subunit B	G3M9Z3	Bacillus_virus	2.4e-114	34.5
WP_011882716.1\|821863_822970_-	DNA polymerase III subunit beta	R9TRR6	Rhizobium_phage	3.7e-46	31.7
WP_072465350.1\|823138_824827_-	chromosomal replication initiator protein DnaA	NA	NA	NA	NA
WP_004198824.1\|825137_825272_+	50S ribosomal protein L34	NA	NA	NA	NA
WP_011886458.1\|825287_825749_+	ribonuclease P protein component	NA	NA	NA	NA
WP_072465351.1\|825752_826091_+	membrane protein insertion efficiency factor YidD	A0A2H4PQM5	Staphylococcus_phage	6.4e-18	53.6

DBSCAN-SWA_53

830410 : 831769

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045578674.1\|830410_831769_-	GGDEF domain-containing protein	A0A127AWB9	Bacillus_phage	5.1e-13	33.7

DBSCAN-SWA_54

835533 : 836625

Acanthamoeba_polyphaga_mimivirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045578675.1\|835533_836625_+	bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada	A0A0G2Y1B6	Acanthamoeba_polyphaga_mimivirus	1.2e-17	36.0

DBSCAN-SWA_55

845563 : 854399

Paramecium_bursaria_Chlorella_virus(20.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_034192453.1\|845563_846577_-	D-2-hydroxyacid dehydrogenase family protein	M1HBE3	Paramecium_bursaria_Chlorella_virus	1.9e-09	22.6
WP_011886437.1\|846977_848027_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_011886436.1\|848143_850741_-	DNA topoisomerase III	A0A2P1ELA0	Moumouvirus	2.6e-18	24.9
WP_011886435.1\|850933_851314_-	thioredoxin family protein	NA	NA	NA	NA
WP_045578679.1\|851350_852694_-	DNA-protecting protein DprA	S6BFL3	Thermus_phage	1.8e-23	35.6
WP_045578680.1\|852879_853383_+	peptide deformylase	A0A067XQZ3	Caulobacter_phage	3.2e-13	30.2
WP_045578681.1\|853415_854399_+\|tRNA	methionyl-tRNA formyltransferase	E3SNR5	Prochlorococcus_phage	2.7e-08	37.2

DBSCAN-SWA_56

861892 : 863806

Vibrio_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011886353.1\|861892_862627_+	7-cyano-7-deazaguanine synthase QueC	A0A1B0Z0B4	Vibrio_phage	2.8e-50	43.1
WP_011886352.1\|862702_863335_+	7-carboxy-7-deazaguanine synthase	R4TAH8	Halovirus	3.0e-08	35.7
WP_011886351.1\|863353_863806_+	6-carboxytetrahydropterin synthase QueD	A0A088FAL2	Vibrio_phage	2.6e-14	31.4

DBSCAN-SWA_57

876830 : 878782

Phaeocystis_globosa_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011886341.1\|876830_877604_+	exodeoxyribonuclease III	R4TWA8	Phaeocystis_globosa_virus	1.6e-27	31.9
WP_011886340.1\|877729_878782_-	NAD(P)-dependent alcohol dehydrogenase	A0A2K9L339	Tupanvirus	1.0e-82	45.8

DBSCAN-SWA_58

892840 : 894184

Erwinia_phage(100.0%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011886327.1\|892840_894184_-\|protease	ATP-dependent protease ATPase subunit HslU	A0A191ZC11	Erwinia_phage	6.1e-43	29.2

DBSCAN-SWA_59

898419 : 903545

Mycobacterium_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011886323.1\|898419_899340_-	tyrosine recombinase XerC	A0A142K830	Mycobacterium_phage	3.1e-14	26.9
WP_045578692.1\|899350_900085_-	DUF484 family protein	NA	NA	NA	NA
WP_011886321.1\|900122_900992_-	diaminopimelate epimerase	NA	NA	NA	NA
WP_011886320.1\|901207_902092_-	lauroyl acyltransferase	A0A1W6JP29	Morganella_phage	1.2e-28	29.7
WP_011886319.1\|902357_903545_+	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	1.1e-120	60.5

DBSCAN-SWA_60

912464 : 914105

Orpheovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_034192472.1\|912464_914105_+	GMC family oxidoreductase N-terminal domain-containing protein	A0A2I2L3D3	Orpheovirus	8.2e-34	27.9

DBSCAN-SWA_61

925357 : 926383

Acinetobacter_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014723832.1\|925357_926383_-	XdhC family protein	A0A0P0IKN7	Acinetobacter_phage	1.2e-11	25.6

DBSCAN-SWA_62

936657 : 937965

Burkholderia_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011886284.1\|936657_937965_+	MFS transporter	Q6JIH2	Burkholderia_virus	4.3e-94	44.4

DBSCAN-SWA_63

942112 : 944124

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_034192484.1\|942112_943111_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.3e-17	31.8
WP_011886279.1\|943107_944124_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	7.9e-19	31.6

DBSCAN-SWA_64

949710 : 954725

Bacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011886272.1\|949710_951663_+	lytic transglycosylase domain-containing protein	A0A0S2SXL7	Bacillus_phage	7.3e-13	35.8
WP_034192488.1\|951824_952784_+	complex I NDUFA9 subunit family protein	NA	NA	NA	NA
WP_011886270.1\|952839_953487_+	glutathione S-transferase family protein	NA	NA	NA	NA
WP_034192489.1\|953483_954725_+	multifunctional CCA addition/repair protein	A0A0F6YPT7	Sinorhizobium_phage	1.7e-79	45.4

DBSCAN-SWA_65

967181 : 968171

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014723811.1\|967181_968171_+	flagellar assembly peptidoglycan hydrolase FlgJ	B6RT57	Bacillus_virus	9.7e-14	41.0

DBSCAN-SWA_66

972786 : 974094

Enterobacteria_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014723808.1\|972786_974094_+	pyrimidine permease	Q9KX94	Enterobacteria_phage	1.3e-159	69.8

DBSCAN-SWA_67

988777 : 990929

Mycoplasma_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_041493993.1\|988777_989764_-	ABC transporter permease subunit	Q6GZ02	Mycoplasma_phage	5.9e-11	25.7
WP_014723792.1\|989774_990929_-	polyamine ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.4e-24	33.0

DBSCAN-SWA_68

1001522 : 1005908

Paramecium_bursaria_Chlorella_virus(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014723783.1\|1001522_1003340_-	glutamine--fructose-6-phosphate transaminase (isomerizing)	A7IW18	Paramecium_bursaria_Chlorella_virus	9.4e-140	46.0
WP_034192503.1\|1003397_1004759_-	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	A0A2K9L277	Tupanvirus	3.2e-31	35.0
WP_034192504.1\|1004894_1005908_-\|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	A0A0U2S5Z2	Escherichia_phage	3.8e-106	69.4

DBSCAN-SWA_69

1024194 : 1025127

Klosneuvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011886201.1\|1024194_1025127_-	hydroxymethylglutaryl-CoA lyase	A0A1V0SKU2	Klosneuvirus	6.3e-39	34.1

DBSCAN-SWA_70

1053402 : 1054614

Emiliania_huxleyi_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011886180.1\|1053402_1054614_-	8-amino-7-oxononanoate synthase	G9E4Q1	Emiliania_huxleyi_virus	1.4e-17	25.0

DBSCAN-SWA_71

1058250 : 1058928

Bacillus_thuringiensis_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045578733.1\|1058250_1058928_-	SDR family oxidoreductase	Q56AQ6	Bacillus_thuringiensis_phage	4.3e-05	27.5

DBSCAN-SWA_72

1068126 : 1069908

Orpheovirus(100.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011886167.1\|1068126_1069908_-\|tRNA	arginine--tRNA ligase	A0A2I2L3K1	Orpheovirus	1.6e-14	20.4

DBSCAN-SWA_73

1073343 : 1074411

Dickeya_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014723742.1\|1073343_1074411_-	homocysteine S-methyltransferase family protein	A0A140XBC7	Dickeya_phage	1.4e-10	48.4

DBSCAN-SWA_74

1083221 : 1083707

uncultured_Mediterranean_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011886156.1\|1083221_1083707_+	D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase	A0A1B1IUK5	uncultured_Mediterranean_phage	9.6e-15	34.6

DBSCAN-SWA_75

1090163 : 1091072

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011886149.1\|1090163_1091072_+	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	2.3e-22	33.0

DBSCAN-SWA_76

1095872 : 1099472

Stx2-converting_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045578746.1\|1095872_1097186_+	D-alanyl-D-alanine carboxypeptidase	B6DZZ7	Stx2-converting_phage	1.6e-67	39.2
WP_045578747.1\|1097234_1098161_+	D-amino acid aminotransferase	NA	NA	NA	NA
WP_011886141.1\|1098160_1098469_+	YbeD family protein	NA	NA	NA	NA
WP_011886140.1\|1098500_1099472_-	transcriptional regulator GcvA	Q6JIH3	Burkholderia_virus	3.3e-30	33.1

DBSCAN-SWA_77

1103064 : 1107602

Bacillus_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045578748.1\|1103064_1103862_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.6e-30	40.9
WP_045578749.1\|1103861_1104824_+	ABC transporter permease subunit	NA	NA	NA	NA
WP_045578750.1\|1104917_1105649_+	UPF0149 family protein	NA	NA	NA	NA
WP_045578751.1\|1105709_1107602_-	gamma-glutamyltransferase	Q5GF27	Diachasmimorpha_longicaudata_entomopoxvirus	5.1e-11	26.8

DBSCAN-SWA_78

1128906 : 1130679

Hokovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014723702.1\|1128906_1130679_+	phosphoenolpyruvate--protein phosphotransferase	A0A1V0SGR7	Hokovirus	1.2e-11	27.9

DBSCAN-SWA_79

1134731 : 1134992

Rhizobium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011886111.1\|1134731_1134992_+	glutaredoxin 3	V9QKN6	Rhizobium_phage	2.6e-11	46.2

DBSCAN-SWA_80

1142110 : 1143718

Flavobacterium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011886103.1\|1142110_1143718_+	cytochrome c oxidase subunit I	R9VX24	Flavobacterium_phage	2.6e-08	36.8

DBSCAN-SWA_81

1151076 : 1152645

uncultured_Caudovirales_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045578760.1\|1151076_1152645_+	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	1.3e-09	53.8

DBSCAN-SWA_82

1155983 : 1169758

Streptomyces_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011886088.1\|1155983_1159199_+	error-prone DNA polymerase	R4TMT6	Streptomyces_phage	9.9e-100	28.5
WP_011886087.1\|1159602_1160337_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_011886086.1\|1160471_1161575_+	N-acetylglucosamine-6-phosphate deacetylase	NA	NA	NA	NA
WP_045578762.1\|1161567_1162575_+	SIS domain-containing protein	F2Y1G4	Organic_Lake_phycodnavirus	6.0e-11	25.2
WP_045578763.1\|1162590_1165203_+	phosphoenolpyruvate--protein phosphotransferase	A0A1V0SGR7	Hokovirus	1.9e-08	28.2
WP_045578764.1\|1165291_1167067_+	PTS transporter subunit EIIC	NA	NA	NA	NA
WP_045578765.1\|1167250_1169758_-	carbohydate-binding domain-containing protein	A0A076G5S5	Staphylococcus_phage	2.9e-06	30.2

DBSCAN-SWA_83

1173854 : 1175720

Salicola_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014723678.1\|1173854_1174790_-	RNA polymerase sigma factor RpoH	A0A248SJA5	Salicola_phage	2.2e-36	36.4
WP_011886077.1\|1175150_1175720_+	acyloxyacyl hydrolase	A0A2H4J0I5	uncultured_Caudovirales_phage	2.6e-11	30.3

DBSCAN-SWA_84

1182346 : 1186888

uncultured_Mediterranean_phage(66.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_006398238.1\|1182346_1182844_+	pantetheine-phosphate adenylyltransferase	A0A1B1IVQ3	uncultured_Mediterranean_phage	9.8e-31	45.3
WP_011886070.1\|1182903_1183170_+	YfhL family 4Fe-4S dicluster ferredoxin	A0A1B1IWY9	uncultured_Mediterranean_phage	3.9e-18	55.8
WP_045578767.1\|1183240_1184308_-	histidinol-phosphate transaminase	NA	NA	NA	NA
WP_045578768.1\|1184441_1185041_-\|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA
WP_011886067.1\|1185158_1185764_-	50S ribosomal protein L25/general stress protein Ctc	NA	NA	NA	NA
WP_011886066.1\|1185925_1186888_-	ribose-phosphate pyrophosphokinase	A0A2K9L2G2	Tupanvirus	9.1e-41	34.6

DBSCAN-SWA_85

1193256 : 1194165

Corynebacterium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_034192566.1\|1193256_1194165_-	RNase adapter RapZ	A0A1P8D5W0	Corynebacterium_phage	1.2e-05	31.1

DBSCAN-SWA_86

1198231 : 1213577

Brazilian_cedratvirus(14.29%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011886055.1\|1198231_1199008_-	LPS export ABC transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	3.9e-18	30.5
WP_011886054.1\|1199004_1199670_-	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA
WP_011886053.1\|1199690_1200305_-	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA
WP_011886052.1\|1200308_1200845_-	HAD family hydrolase	E3T535	Cafeteria_roenbergensis_virus	3.0e-09	26.8
WP_014723665.1\|1200844_1201828_-	KpsF/GutQ family sugar-phosphate isomerase	A0A2P0VNK5	Tetraselmis_virus	5.8e-43	37.5
WP_045578773.1\|1201953_1203960_+	monovalent cation:proton antiporter family protein	NA	NA	NA	NA
WP_011886049.1\|1204078_1204645_+	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	2.6e-27	41.1
WP_011886048.1\|1204679_1205294_+	LysE family translocator	NA	NA	NA	NA
WP_014723663.1\|1205299_1206157_+	DUF4743 domain-containing protein	NA	NA	NA	NA
WP_045578774.1\|1206260_1207145_+	formyltetrahydrofolate deformylase	M4QRX9	Synechococcus_phage	1.5e-13	34.8
WP_014723662.1\|1207246_1208329_-	membrane protein	NA	NA	NA	NA
WP_011886044.1\|1208586_1211472_-	excinuclease ABC subunit UvrA	A0A1B1IVR3	uncultured_Mediterranean_phage	3.3e-304	54.5
WP_014723660.1\|1211734_1212922_+	MFS transporter	NA	NA	NA	NA
WP_011886042.1\|1213025_1213577_+	single-stranded DNA-binding protein	Q6V7S6	Burkholderia_virus	8.0e-50	89.0

DBSCAN-SWA_87

1230095 : 1230812

Chrysochromulina_ericina_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045578780.1\|1230095_1230812_+	3-oxoacyl-ACP reductase FabG	A0A0N9R355	Chrysochromulina_ericina_virus	6.2e-10	25.7

DBSCAN-SWA_88

1250992 : 1251817

Vibrio_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011886006.1\|1250992_1251817_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	A0A2I7SAX1	Vibrio_phage	3.1e-37	36.5

DBSCAN-SWA_89

1261551 : 1266792

Tetraselmis_virus(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011885998.1\|1261551_1263129_+	ubiquinone biosynthesis regulatory protein kinase UbiB	A0A2P0VMP1	Tetraselmis_virus	1.3e-28	26.5
WP_045578786.1\|1263146_1263773_+	SAM-dependent methyltransferase	NA	NA	NA	NA
WP_014723622.1\|1263868_1264210_+	FmdB family transcriptional regulator	NA	NA	NA	NA
WP_011885995.1\|1264271_1264922_+	DUF502 domain-containing protein	A0A2I7S9X1	Vibrio_phage	8.3e-14	28.4
WP_014723620.1\|1264989_1266792_+\|tRNA	aspartate--tRNA ligase	A0A2K9L0E9	Tupanvirus	8.2e-19	28.9

DBSCAN-SWA_90

1283580 : 1285452

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045579429.1\|1283580_1285452_+	ABC transporter ATP-binding protein/permease	W8CYL7	Bacillus_phage	4.2e-42	28.0

DBSCAN-SWA_91

1307831 : 1314549

Pseudomonas_phage(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011885959.1\|1307831_1308878_-	PhoH family protein	A0A0S0MVD6	Pseudomonas_phage	1.4e-47	45.1
WP_011885958.1\|1308911_1310285_-\|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	NA	NA	NA	NA
WP_011885957.1\|1310689_1311382_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_011885956.1\|1311813_1312524_+	3,4-dihydroxy-2-butanone-4-phosphate synthase	A0A2H4PQS2	Staphylococcus_phage	3.0e-41	43.7
WP_011885955.1\|1312612_1313299_-	HAD-IA family hydrolase	NA	NA	NA	NA
WP_011885954.1\|1313832_1314549_-	aquaporin family protein	M1HJ77	Paramecium_bursaria_Chlorella_virus	3.1e-22	31.6

DBSCAN-SWA_92

1318912 : 1319692

Escherichia_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011885949.1\|1318912_1319692_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	2.4e-23	29.4

DBSCAN-SWA_93

1323422 : 1324883

Diachasmimorpha_longicaudata_entomopoxvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045578795.1\|1323422_1324883_-	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	3.2e-53	33.4

DBSCAN-SWA_94

1328531 : 1329680

Oenococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011885941.1\|1328531_1329680_-	galactonate dehydratase	Q6A202	Oenococcus_phage	7.0e-56	33.4

DBSCAN-SWA_95

1341481 : 1341799

Ralstonia_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045578802.1\|1341481_1341799_+	hypothetical protein	W6CMZ9	Ralstonia_phage	1.8e-14	45.9

DBSCAN-SWA_96

1344878 : 1351447

Xanthomonas_phage(25.0%)

integrase

attL 1346672:1346687|attR 1358236:1358251

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_080938679.1\|1344878_1345787_+	hypothetical protein	A0A077JGB2	Xanthomonas_phage	8.6e-17	30.3
WP_167343727.1\|1345783_1347226_+	type II secretory pathway protein	NA	NA	NA	NA
1346672:1346687	attL	NA	NA	NA	NA
WP_144410647.1\|1347512_1347872_+	hypothetical protein	NA	NA	NA	NA
WP_045578809.1\|1347888_1348230_+	hypothetical protein	NA	NA	NA	NA
WP_045578810.1\|1348304_1349084_+	hypothetical protein	A0A097ZIH2	Ralstonia_phage	2.7e-35	43.8
WP_045578811.1\|1349083_1349302_+	DUF4224 domain-containing protein	NA	NA	NA	NA
WP_045578812.1\|1349303_1350383_+\|integrase	tyrosine-type recombinase/integrase	C8CLF4	Xylella_phage	3.1e-98	53.0
WP_045578813.1\|1350390_1350597_+	antitoxin VbhA family protein	NA	NA	NA	NA
WP_009910420.1\|1351138_1351447_+	helix-turn-helix transcriptional regulator	E5E3S9	Burkholderia_phage	4.1e-19	53.1
1358236:1358251	attR	NA	NA	NA	NA

DBSCAN-SWA_97

1354496 : 1358052

Hokovirus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045578814.1\|1354496_1356044_-	sensor histidine kinase	A0A1V0SGX0	Hokovirus	6.8e-06	23.3
WP_011885929.1\|1356061_1356793_-	response regulator transcription factor	Q6XM27	Feldmannia_irregularis_virus	3.6e-05	28.3
WP_011885928.1\|1356981_1358052_+	recombinase RecA	A0A0S2MVG1	Bacillus_phage	1.7e-117	63.7

DBSCAN-SWA_98

1362008 : 1362713

Pseudomonas_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011885923.1\|1362008_1362713_+	TerC family protein	A0A2R2YAT9	Pseudomonas_phage	5.8e-37	45.5

DBSCAN-SWA_99

1368454 : 1371142

uncultured_Caudovirales_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045578817.1\|1368454_1371142_-	type VI secretion system tip protein VgrG	A0A2H4JCD4	uncultured_Caudovirales_phage	2.1e-58	23.9

DBSCAN-SWA_100

1384464 : 1388214

Mollivirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014723567.1\|1384464_1385355_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A0M4JBD3	Mollivirus	1.7e-54	39.4
WP_011885906.1\|1385371_1385893_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	NA	NA	NA
WP_045578821.1\|1385968_1387165_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA
WP_011885904.1\|1387176_1388214_+	threonylcarbamoyl-AMP synthase	S4VW33	Pandoravirus	1.4e-39	37.8

DBSCAN-SWA_101

1393427 : 1396353

Bacillus_phage(50.0%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045578824.1\|1393427_1394768_+	two-component sensor histidine kinase	W8CYF6	Bacillus_phage	6.7e-18	30.0
WP_011885898.1\|1394868_1396353_+\|protease	DegQ family serine endoprotease	A0A1B1IT49	uncultured_Mediterranean_phage	3.7e-25	31.1

DBSCAN-SWA_102

1407666 : 1409043

Enterobacteria_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011885887.1\|1407666_1409043_-	purine permease	Q9KX94	Enterobacteria_phage	1.8e-29	29.4

DBSCAN-SWA_103

1412963 : 1413851

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045579432.1\|1412963_1413851_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	6.4e-17	31.3

DBSCAN-SWA_104

1422115 : 1423979

Acanthocystis_turfacea_Chlorella_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011885873.1\|1422115_1422814_+	HAD-IA family hydrolase	M1IMD4	Acanthocystis_turfacea_Chlorella_virus	4.8e-07	41.6
WP_045578833.1\|1422869_1423979_+	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	G9BWD6	Planktothrix_phage	3.6e-25	35.3

DBSCAN-SWA_105

1437630 : 1450289

Orpheovirus(16.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014723528.1\|1437630_1438851_-	class I SAM-dependent methyltransferase	A0A2I2L5L3	Orpheovirus	5.9e-45	32.6
WP_014723527.1\|1438978_1439623_-	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA
WP_034192646.1\|1439752_1440610_+\|tRNA	tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA	S4VW33	Pandoravirus	9.9e-15	33.3
WP_034192645.1\|1440641_1441487_-	thioredoxin	A0A1X9I9P5	Staphylococcus_phage	6.4e-14	36.6
WP_045578837.1\|1441539_1442421_-	pirin family protein	NA	NA	NA	NA
WP_174479792.1\|1442934_1443813_+	EamA family transporter	NA	NA	NA	NA
WP_011885826.1\|1443928_1445446_-	N-acetylmuramoyl-L-alanine amidase	Q5YA51	Bacillus_phage	1.1e-13	28.9
WP_014723523.1\|1445427_1445979_-\|tRNA	bifunctional tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE/phosphotransferase	NA	NA	NA	NA
WP_034192642.1\|1445996_1447223_+\|tRNA	tRNA epoxyqueuosine(34) reductase QueG	NA	NA	NA	NA
WP_011885823.1\|1447281_1447752_+	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	NA	NA	NA
WP_011885822.1\|1447748_1448711_+	site-specific tyrosine recombinase XerD	A0A0K2CP59	Brevibacillus_phage	2.6e-24	29.1
WP_011885821.1\|1448726_1450289_-	AMP-binding protein	A0A1V0SBX8	Catovirus	2.1e-15	25.8

DBSCAN-SWA_106

1453708 : 1454638

Paramecium_bursaria_Chlorella_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011885816.1\|1453708_1454638_-	ornithine carbamoyltransferase	M1HWF9	Paramecium_bursaria_Chlorella_virus	1.1e-22	27.3

DBSCAN-SWA_107

1462078 : 1464279

Gordonia_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011885809.1\|1462078_1463461_+	exodeoxyribonuclease VII large subunit	A0A1B3AYB4	Gordonia_phage	2.3e-29	28.5
WP_014723511.1\|1463700_1464279_+	superoxide dismutase	Q56AR7	Bacillus_thuringiensis_phage	4.0e-44	44.7

DBSCAN-SWA_108

1477192 : 1482815

Streptococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_034192633.1\|1477192_1479304_-	elongation factor G	E4ZFJ7	Streptococcus_phage	6.4e-55	26.4
WP_014723499.1\|1479521_1480022_-	DUF192 domain-containing protein	A0A1B1IUW8	uncultured_Mediterranean_phage	4.1e-13	40.2
WP_072465376.1\|1480181_1480394_-	hypothetical protein	NA	NA	NA	NA
WP_011885785.1\|1480695_1481274_-	pseudouridine synthase	NA	NA	NA	NA
WP_011885784.1\|1481558_1482815_+	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	4.0e-12	64.8

DBSCAN-SWA_109

1488127 : 1500929

Lake_Baikal_phage(14.29%)

tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004196460.1\|1488127_1488331_-	cold-shock protein	A0A2H4N7Y6	Lake_Baikal_phage	6.8e-23	81.8
WP_006398529.1\|1488877_1489192_+\|protease	ATP-dependent Clp protease adapter ClpS	A0A218MMY6	uncultured_virus	4.4e-13	44.6
WP_011885780.1\|1489188_1491489_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.7e-165	41.1
WP_045578846.1\|1491592_1492972_+	amino acid permease	NA	NA	NA	NA
WP_011885778.1\|1493102_1493873_+	membrane protein	NA	NA	NA	NA
WP_011885777.1\|1493928_1494375_-	dUTP diphosphatase	Q2NP83	Xanthomonas_phage	1.3e-47	63.0
WP_011885776.1\|1494429_1495641_-	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	Q9HH70	Methanothermobacter_phage	6.1e-42	31.6
WP_011885775.1\|1495708_1496209_-	lipoprotein signal peptidase	NA	NA	NA	NA
WP_011885774.1\|1496211_1499049_-\|tRNA	isoleucine--tRNA ligase	A0A1V0SJ93	Klosneuvirus	4.4e-83	26.5
WP_011885773.1\|1499151_1500144_-	bifunctional riboflavin kinase/FAD synthetase	NA	NA	NA	NA
WP_011885772.1\|1500266_1500929_+	phosphoribosylglycinamide formyltransferase	E3SNR5	Prochlorococcus_phage	3.9e-27	41.1

DBSCAN-SWA_110

1516462 : 1519775

Planktothrix_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011885758.1\|1516462_1517179_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.1e-14	26.4
WP_011885757.1\|1517420_1518092_+	DUF2278 family protein	NA	NA	NA	NA
WP_011885756.1\|1518121_1518577_-	GNAT family acetyltransferase	NA	NA	NA	NA
WP_011885755.1\|1518590_1519775_-	acetylornithine transaminase	A0A1V0SKB7	Klosneuvirus	7.3e-24	26.5

DBSCAN-SWA_111

1526451 : 1528250

Escherichia_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_041494180.1\|1526451_1527480_+\|transposase	IS21 family transposase	A0A2L1IVA1	Escherichia_phage	6.2e-72	44.1
WP_011881749.1\|1527476_1528250_+	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	1.6e-80	57.2

DBSCAN-SWA_112

1535247 : 1535823

Aeromonas_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045578857.1\|1535247_1535823_-	recombinase family protein	A0A219YA40	Aeromonas_phage	4.4e-27	42.8

DBSCAN-SWA_113

1540621 : 1547841

Agrobacterium_phage(33.33%)

integrase

attL 1531204:1531218|attR 1556085:1556099

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1531204:1531218	attL	NA	NA	NA	NA
WP_013699107.1\|1540621_1540813_+	AlpA family phage regulatory protein	A0A2L0V109	Agrobacterium_phage	4.9e-07	49.1
WP_045578860.1\|1540809_1541334_+	hypothetical protein	NA	NA	NA	NA
WP_045578861.1\|1541830_1542133_+	hypothetical protein	NA	NA	NA	NA
WP_045578862.1\|1542125_1542338_+	hypothetical protein	NA	NA	NA	NA
WP_014722320.1\|1542330_1542678_+	hypothetical protein	NA	NA	NA	NA
WP_004556769.1\|1542687_1543014_+	hypothetical protein	NA	NA	NA	NA
WP_045578863.1\|1543140_1546005_+	DUF927 domain-containing protein	A0A1B0VP75	Pseudomonas_phage	1.0e-71	35.2
WP_045578864.1\|1546626_1547841_-\|integrase	integrase arm-type DNA-binding domain-containing protein	B7SYF8	Stenotrophomonas_phage	2.6e-109	50.8
1556085:1556099	attR	NA	NA	NA	NA

DBSCAN-SWA_114

1554639 : 1555956

Hokovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045578866.1\|1554639_1555956_+	sulfate adenylyltransferase subunit 1	A0A1V0SGC3	Hokovirus	1.2e-35	29.8

DBSCAN-SWA_115

1559636 : 1561148

Mycoplasma_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011885736.1\|1559636_1561148_+	leucyl aminopeptidase	Q6GYZ8	Mycoplasma_phage	2.3e-51	40.1

DBSCAN-SWA_116

1568809 : 1569607

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011885727.1\|1568809_1569607_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	8.1e-11	26.3

DBSCAN-SWA_117

1577941 : 1578601

Vibrio_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011885717.1\|1577941_1578601_+	AAA family ATPase	A2I303	Vibrio_virus	1.3e-14	36.6

DBSCAN-SWA_118

1587657 : 1589823

Indivirus(100.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045578877.1\|1587657_1589823_-\|tRNA	methionine--tRNA ligase	A0A1V0SDF2	Indivirus	5.5e-54	29.3

DBSCAN-SWA_119

1593069 : 1593639

Pseudomonas_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_006398615.1\|1593069_1593639_+	dCTP deaminase	S5VM63	Pseudomonas_phage	1.0e-71	70.6

DBSCAN-SWA_120

1596930 : 1597614

Acanthocystis_turfacea_Chlorella_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045578879.1\|1596930_1597614_-	HAD family phosphatase	M1IMD4	Acanthocystis_turfacea_Chlorella_virus	1.0e-06	33.7

DBSCAN-SWA_121

1612925 : 1617375

uncultured_Caudovirales_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011885693.1\|1612925_1613453_+	inorganic diphosphatase	A0A2H4J8U1	uncultured_Caudovirales_phage	3.8e-49	52.6
WP_080938683.1\|1613509_1614295_-	GIY-YIG nuclease family protein	W8W2G4	Invertebrate_iridovirus	7.5e-09	45.8
WP_034192594.1\|1614375_1615554_-	N-acetyltransferase	NA	NA	NA	NA
WP_045578884.1\|1615662_1617375_+	NAD+ synthase	A0A2L0UZF5	Agrobacterium_phage	4.0e-92	37.0

DBSCAN-SWA_122

1621245 : 1622025

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_034192591.1\|1621245_1622025_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.3e-16	33.3

DBSCAN-SWA_123

1625725 : 1626451

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_009693256.1\|1625725_1626451_+	response regulator	W8CYM9	Bacillus_phage	8.4e-31	35.8

DBSCAN-SWA_124

1630342 : 1631689

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011885678.1\|1630342_1631689_+	nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	8.2e-32	39.0

DBSCAN-SWA_125

1634839 : 1635418

Ochrobactrum_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045578888.1\|1634839_1635418_+	AAA family ATPase	A0A219VHB7	Ochrobactrum_phage	9.3e-25	60.5

DBSCAN-SWA_126

1641258 : 1647855

Bacillus_virus(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_172820441.1\|1641258_1643244_+	ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	6.0e-47	28.4
WP_045578892.1\|1643482_1645465_+	type IIA DNA topoisomerase subunit B	G3M9Z3	Bacillus_virus	9.4e-93	34.8
WP_045578893.1\|1645533_1647855_+	DNA topoisomerase IV subunit A	G3M9Z5	Bacillus_virus	4.7e-83	37.0

DBSCAN-SWA_127

1651532 : 1653872

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_034194020.1\|1651532_1653872_-	EAL domain-containing protein	A0A127AWB9	Bacillus_phage	3.5e-14	34.0

DBSCAN-SWA_128

1660309 : 1662208

uncultured_Mediterranean_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045578897.1\|1660309_1662208_+	molecular chaperone HtpG	A0A1B1ISV4	uncultured_Mediterranean_phage	5.3e-117	37.8

DBSCAN-SWA_129

1667733 : 1668687

Synechococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045578898.1\|1667733_1668687_-	transaldolase	A0A0E3F5V4	Synechococcus_phage	1.5e-11	32.0

DBSCAN-SWA_130

1682799 : 1687605

Mycobacterium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045578904.1\|1682799_1687605_-	DNA translocase FtsK	S5VNE3	Mycobacterium_phage	1.9e-83	48.8

DBSCAN-SWA_131

1690947 : 1698331

Diachasmimorpha_longicaudata_entomopoxvirus(50.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011885601.1\|1690947_1692486_+	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	7.4e-53	35.1
WP_011885600.1\|1692802_1693696_-\|tRNA	tRNA glutamyl-Q(34) synthetase GluQRS	NA	NA	NA	NA
WP_014723400.1\|1693718_1694573_-	sulfurtransferase	NA	NA	NA	NA
WP_045578907.1\|1694797_1698331_+	DNA polymerase III subunit alpha	A0A0K1Y906	Streptomyces_phage	9.3e-184	36.1

DBSCAN-SWA_132

1704590 : 1706372

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011885592.1\|1704590_1706372_+	lipid A export permease/ATP-binding protein MsbA	W8CYL7	Bacillus_phage	8.9e-42	24.8

DBSCAN-SWA_133

1724525 : 1726610

Paramecium_bursaria_Chlorella_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_041493868.1\|1724525_1726610_+	potassium-transporting ATPase subunit KdpB	M1HBF8	Paramecium_bursaria_Chlorella_virus	3.4e-24	26.1

DBSCAN-SWA_134

1736778 : 1737414

Cafeteria_roenbergensis_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045578919.1\|1736778_1737414_+	DUF924 domain-containing protein	E3T4R4	Cafeteria_roenbergensis_virus	4.0e-13	30.2

DBSCAN-SWA_135

1740456 : 1754462

Enterococcus_phage(20.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_034194062.1\|1740456_1741038_-	TIGR00730 family Rossman fold protein	A0A1G5S9X4	Enterococcus_phage	1.6e-16	35.5
WP_045578920.1\|1741034_1741796_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_011885554.1\|1741986_1742523_-	diacylglycerol kinase	NA	NA	NA	NA
WP_011885553.1\|1742519_1743554_-	glycosyltransferase family 1 protein	NA	NA	NA	NA
WP_011885552.1\|1743583_1744522_-	UDP-2,3-diacylglucosamine diphosphatase	A0A218MKA7	uncultured_virus	9.4e-67	48.5
WP_172820462.1\|1744816_1745287_-	RDD family protein	NA	NA	NA	NA
WP_011885550.1\|1745335_1746082_-	DUF3106 domain-containing protein	NA	NA	NA	NA
WP_011885549.1\|1746109_1746535_-	DUF3619 family protein	NA	NA	NA	NA
WP_011885548.1\|1746531_1747095_-	RNA polymerase sigma factor	NA	NA	NA	NA
WP_014723366.1\|1747447_1749211_+	acetolactate synthase 3 catalytic subunit	G9E525	Ostreococcus_lucimarinus_virus	3.5e-30	30.0
WP_006750445.1\|1749322_1749814_+	acetolactate synthase small subunit	NA	NA	NA	NA
WP_006478252.1\|1749919_1750936_+	ketol-acid reductoisomerase	NA	NA	NA	NA
WP_011885546.1\|1751063_1751708_+	phosphatidylserine decarboxylase	A0A1V0SDU9	Indivirus	3.1e-13	30.3
WP_011885545.1\|1751723_1752596_+	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA
WP_045578922.1\|1752917_1754462_+	2-isopropylmalate synthase	E5EQ69	Micromonas_sp._RCC1109_virus	1.2e-07	24.9

DBSCAN-SWA_136

1780063 : 1780654

Lactobacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014723354.1\|1780063_1780654_+	NUDIX hydrolase	A0A2K9VDH1	Lactobacillus_phage	4.6e-11	37.8

DBSCAN-SWA_137

1821838 : 1825744

Caulobacter_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045578932.1\|1821838_1822420_-	TIGR00645 family protein	K4K6D8	Caulobacter_phage	7.4e-22	31.2
WP_045578933.1\|1822542_1823445_-	DMT family transporter	NA	NA	NA	NA
WP_045578934.1\|1823761_1825744_+	acetate--CoA ligase	A0A2H4PQU7	Staphylococcus_phage	5.2e-83	44.6

DBSCAN-SWA_138

1834341 : 1842391

Caulobacter_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045578936.1\|1834341_1836849_-	type VI secretion system tip protein VgrG	A0A2H4JCD4	uncultured_Caudovirales_phage	4.3e-34	26.7
WP_045578937.1\|1838719_1839832_+	toxic anion resistance protein	NA	NA	NA	NA
WP_045578938.1\|1839843_1840581_+	VWA domain-containing protein	I7HXI7	Enterobacteria_phage	9.4e-38	35.8
WP_045578939.1\|1840625_1841642_+	DUF475 domain-containing protein	K4JUR1	Caulobacter_phage	4.7e-72	46.7
WP_034194585.1\|1841734_1842391_+	TerD family protein	K4JRX3	Caulobacter_phage	1.3e-35	41.7

DBSCAN-SWA_139

1852293 : 1853817

Catovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014723315.1\|1852293_1853817_+	histidine ammonia-lyase	A0A1V0S940	Catovirus	8.6e-78	36.5

DBSCAN-SWA_140

1866242 : 1870427

Catovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045578949.1\|1866242_1870427_+	ATP-dependent RNA helicase HrpA	A0A1V0SBU4	Catovirus	9.4e-50	29.8

DBSCAN-SWA_141

1879700 : 1881845

Klosneuvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045578950.1\|1879700_1881845_+	S9 family peptidase	A0A1V0SHT0	Klosneuvirus	5.0e-31	37.2

DBSCAN-SWA_142

1885333 : 1888570

Indivirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014723292.1\|1885333_1887421_-	M3 family metallopeptidase	A0A1V0SD92	Indivirus	1.1e-38	21.8
WP_034194560.1\|1887715_1888570_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	A0A249XZQ2	Enterococcus_phage	2.9e-38	39.9

DBSCAN-SWA_143

1896876 : 1898649

Erysipelothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045578953.1\|1896876_1898649_+	dihydrolipoyl dehydrogenase	A0A2K5B2C5	Erysipelothrix_phage	4.7e-35	24.0

DBSCAN-SWA_144

1907457 : 1928968

Lake_Baikal_phage(18.18%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_009691729.1\|1907457_1907865_+	Fe-S cluster assembly scaffold IscU	A0A2H4N7M4	Lake_Baikal_phage	1.8e-51	78.7
WP_011885413.1\|1907929_1908253_+	iron-sulfur cluster assembly protein IscA	A0A2H4N7N5	Lake_Baikal_phage	3.0e-25	52.3
WP_041493968.1\|1908350_1908878_+	Fe-S protein assembly co-chaperone HscB	NA	NA	NA	NA
WP_045578954.1\|1908932_1910801_+	Fe-S protein assembly chaperone HscA	A0A0N9QXN8	Chrysochromulina_ericina_virus	2.3e-101	42.2
WP_011885410.1\|1910884_1911226_+	ISC system 2Fe-2S type ferredoxin	NA	NA	NA	NA
WP_011885409.1\|1911262_1911472_+	Fe-S cluster assembly protein IscX	NA	NA	NA	NA
WP_011885408.1\|1911579_1912308_-	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA
WP_011885407.1\|1912655_1914182_-\|tRNA	lysine--tRNA ligase	A0A2K9KZX5	Tupanvirus	2.1e-84	38.0
WP_106919330.1\|1914257_1915362_-	peptide chain release factor 2	A0A0S4KWG0	Pseudomonas_phage	3.7e-06	35.5
WP_045578955.1\|1915509_1917207_-	single-stranded-DNA-specific exonuclease RecJ	A7KV88	Bacillus_phage	2.7e-56	29.9
WP_045578956.1\|1917217_1918294_-	hypothetical protein	NA	NA	NA	NA
WP_011885403.1\|1918501_1919755_+	lipoprotein-releasing ABC transporter permease subunit	NA	NA	NA	NA
WP_014723276.1\|1919810_1920506_+	lipoprotein-releasing ABC transporter ATP-binding protein LolD	G9BWD6	Planktothrix_phage	1.3e-33	41.5
WP_045578957.1\|1920568_1921357_+	TatD family hydrolase	NA	NA	NA	NA
WP_045579443.1\|1921416_1923927_+	DNA internalization-related competence protein ComEC/Rec2	Q332C0	Clostridium_botulinum_C_phage	1.4e-24	29.4
WP_011885399.1\|1924048_1924894_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_011885398.1\|1925069_1926728_+	CTP synthase	A0A1J0FA14	Only_Syngen_Nebraska_virus	1.1e-150	52.0
WP_011885397.1\|1926724_1927579_+	3-deoxy-8-phosphooctulonate synthase	E3T537	Cafeteria_roenbergensis_virus	2.6e-47	40.5
WP_011885396.1\|1927684_1928968_+	phosphopyruvate hydratase	W6LP63	Streptococcus_phage	2.2e-151	62.6

DBSCAN-SWA_145

1940111 : 1940888

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011885382.1\|1940111_1940888_+	MBL fold metallo-hydrolase	U5PVD0	Bacillus_phage	5.1e-10	27.1

DBSCAN-SWA_146

1944568 : 1947226

Indivirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_034192439.1\|1944568_1947226_-	DNA mismatch repair protein MutS	A0A1V0SDQ0	Indivirus	1.5e-24	23.7

DBSCAN-SWA_147

1953464 : 1957014

Bodo_saltans_virus(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011885201.1\|1953464_1953956_-	peptidyl-prolyl cis-trans isomerase	A0A2H4UTF4	Bodo_saltans_virus	5.7e-07	29.6
WP_014723258.1\|1954044_1954620_-	peptidyl-prolyl cis-trans isomerase	A0A1V0SCU1	Indivirus	3.1e-12	39.3
WP_060044880.1\|1954659_1955382_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_014723256.1\|1955616_1957014_+\|tRNA	cysteine--tRNA ligase	A0A2K9L6B7	Tupanvirus	1.3e-40	33.5

DBSCAN-SWA_148

1963153 : 1965940

uncultured_Caudovirales_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045579444.1\|1963153_1965940_+	type VI secretion system tip protein VgrG	A0A2H4JCD4	uncultured_Caudovirales_phage	5.9e-24	22.8

DBSCAN-SWA_149

1985048 : 1988477

Planktothrix_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011885183.1\|1985048_1986671_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.3e-20	32.4
WP_011885182.1\|1986800_1987472_+	C40 family peptidase	A0A0A8WF62	Clostridium_phage	2.1e-20	37.9
WP_011885181.1\|1987562_1988477_-	patatin-like phospholipase family protein	A0A1V0SKV5	Klosneuvirus	7.4e-08	26.7

DBSCAN-SWA_150

1999600 : 2001151

Diachasmimorpha_longicaudata_entomopoxvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045578972.1\|1999600_2001151_-	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	3.8e-41	28.7

DBSCAN-SWA_151

2007603 : 2013226

Yellowstone_lake_mimivirus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011885163.1\|2007603_2008674_+	alanine racemase	A0A0P0YM39	Yellowstone_lake_mimivirus	8.6e-24	28.6
WP_011885162.1\|2008683_2010060_+	DNA repair protein RadA	NA	NA	NA	NA
WP_014723233.1\|2010198_2010465_+	DUF2866 domain-containing protein	NA	NA	NA	NA
WP_014723232.1\|2010681_2012610_-	ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	9.3e-61	29.8
WP_014723231.1\|2012746_2013226_+	glutathione peroxidase	Q6VZR0	Canarypox_virus	2.7e-25	39.6

DBSCAN-SWA_152

2025823 : 2028429

Ralstonia_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011885150.1\|2025823_2027899_+	NAD-dependent DNA ligase LigA	A0A0K2QQN8	Ralstonia_phage	4.0e-150	46.2
WP_011885149.1\|2027895_2028429_+	peptide deformylase	A0A1D8KUY1	Synechococcus_phage	8.6e-09	32.8

DBSCAN-SWA_153

2037715 : 2038498

Flavobacterium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011885140.1\|2037715_2038498_+	di-trans,poly-cis-decaprenylcistransferase	R9W0U9	Flavobacterium_phage	3.2e-20	39.1

DBSCAN-SWA_154

2048603 : 2056010

Emiliania_huxleyi_virus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011885131.1\|2048603_2049254_+	ribonuclease HII	V5LS49	Emiliania_huxleyi_virus	5.4e-29	42.9
WP_011885130.1\|2049250_2050033_+	RNA methyltransferase	NA	NA	NA	NA
WP_011885129.1\|2050145_2050961_-	kinase/pyrophosphorylase	NA	NA	NA	NA
WP_045578983.1\|2051337_2053737_+	phosphoenolpyruvate synthase	A0A1V0SGR7	Hokovirus	3.7e-168	35.7
WP_011885127.1\|2053943_2054378_+	NfeD family protein	NA	NA	NA	NA
WP_011885126.1\|2054411_2055347_+	SPFH/Band 7/PHB domain protein	NA	NA	NA	NA
WP_006478511.1\|2055563_2056010_-	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	3.4e-27	43.4

DBSCAN-SWA_155

2062015 : 2067110

Klosneuvirus(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011885118.1\|2062015_2063476_+	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	1.5e-95	39.6
WP_011885117.1\|2063482_2064091_+	hypothetical protein	NA	NA	NA	NA
WP_045578988.1\|2064198_2065818_+	glutamine-hydrolyzing GMP synthase	A0A1V0SH76	Hokovirus	2.1e-13	26.8
WP_011885115.1\|2066118_2066520_+	DUF1992 domain-containing protein	NA	NA	NA	NA
WP_011885114.1\|2066516_2067110_+\|tRNA	tRNA adenosine(34) deaminase TadA	S4VYT2	Pandoravirus	1.3e-05	30.8

DBSCAN-SWA_156

2098535 : 2099261

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004199523.1\|2098535_2099261_-	two-component system response regulator OmpR	W8CYM9	Bacillus_phage	8.1e-34	36.7

DBSCAN-SWA_157

2104046 : 2105267

Enterobacteria_phage(100.0%)

integrase

attL 2097748:2097764|attR 2108646:2108662

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2097748:2097764	attL	NA	NA	NA	NA
WP_045578999.1\|2104046_2105267_+\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	4.0e-94	45.1
WP_045578999.1\|2104046_2105267_+\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	4.0e-94	45.1
2108646:2108662	attR	NA	NA	NA	NA

DBSCAN-SWA_158

2114842 : 2124991

Agrobacterium_phage(20.0%)

transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011885077.1\|2114842_2115496_+	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	A0A223W000	Agrobacterium_phage	1.4e-53	54.9
WP_011885076.1\|2115657_2116929_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	3.5e-133	58.5
WP_011885075.1\|2117126_2119550_+	endopeptidase La	A0A0R6PGP8	Moraxella_phage	3.7e-224	53.2
WP_014723168.1\|2120057_2121992_+	SurA N-terminal domain-containing protein	NA	NA	NA	NA
WP_106919331.1\|2122124_2123488_-\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	8.5e-77	52.9
WP_034195345.1\|2123601_2124279_-	arylesterase	NA	NA	NA	NA
WP_045579003.1\|2124277_2124991_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.6e-32	41.1

DBSCAN-SWA_159

2130009 : 2146204

Burkholderia_phage(20.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045579007.1\|2130009_2134074_+	phosphoribosylformylglycinamidine synthase	A9YX36	Burkholderia_phage	1.5e-222	91.9
WP_045579008.1\|2134073_2134613_+	N-acetyltransferase	NA	NA	NA	NA
WP_011885066.1\|2134755_2135538_-	peptidylprolyl isomerase	NA	NA	NA	NA
WP_011885065.1\|2135556_2135865_-	BolA family transcriptional regulator	NA	NA	NA	NA
WP_014723160.1\|2135866_2136397_-	septation protein A	NA	NA	NA	NA
WP_011885063.1\|2136521_2136953_-	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA
WP_045579009.1\|2136991_2138560_-	YdiU family protein	A0A075BSJ0	Microcystis_phage	3.3e-56	31.7
WP_014723157.1\|2138679_2140323_+	fatty-acid--CoA ligase	A0A2H4PQU7	Staphylococcus_phage	5.9e-24	23.4
WP_045579010.1\|2140505_2142590_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
WP_045579011.1\|2142635_2143268_+	bifunctional nicotinamidase/pyrazinamidase	A0A2K9L2K0	Tupanvirus	8.9e-21	36.5
WP_045579012.1\|2143311_2144490_+	acetyl-CoA C-acyltransferase	NA	NA	NA	NA
WP_045579013.1\|2144803_2146204_+	GGDEF domain-containing protein	A0A127AWB9	Bacillus_phage	2.4e-18	31.4

DBSCAN-SWA_160

2158797 : 2159760

Powai_lake_megavirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011885045.1\|2158797_2159760_+	alpha/beta hydrolase	A0A167RJ59	Powai_lake_megavirus	1.8e-28	32.8

DBSCAN-SWA_161

2163332 : 2163953

Bacteriophage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045579451.1\|2163332_2163953_+	dTMP kinase	A0A1L2BX49	Bacteriophage	4.6e-30	41.5

DBSCAN-SWA_162

2168354 : 2169530

Escherichia_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045579024.1\|2168354_2169530_+	AAA family ATPase	A0A077SLJ9	Escherichia_phage	4.8e-68	39.5

DBSCAN-SWA_163

2176869 : 2206599

Sinorhizobium_phage(33.33%)

transposase,integrase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045579027.1\|2176869_2178645_-	glyoxylate carboligase	E4WLQ6	Ostreococcus_tauri_virus	7.3e-44	27.9
WP_011885024.1\|2178837_2179749_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_006755436.1\|2179953_2180328_+	30S ribosomal protein S6	NA	NA	NA	NA
WP_011885023.1\|2180368_2180668_+	primosomal replication protein N	NA	NA	NA	NA
WP_011885022.1\|2180672_2180948_+	30S ribosomal protein S18	NA	NA	NA	NA
WP_011885021.1\|2180975_2181428_+	50S ribosomal protein L9	NA	NA	NA	NA
WP_011885020.1\|2181563_2182946_+	replicative DNA helicase	C7BGG1	Burkholderia_phage	1.4e-138	58.5
WP_158348955.1\|2183296_2184553_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_080938690.1\|2185047_2185764_+	hypothetical protein	NA	NA	NA	NA
WP_080938691.1\|2185940_2188175_-	transglycosylase SLT domain-containing protein	A0A2D1GLK8	Escherichia_phage	4.7e-08	41.7
WP_144410650.1\|2188184_2188826_-	hypothetical protein	NA	NA	NA	NA
WP_106919332.1\|2189005_2190125_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	2.1e-49	39.9
WP_144410651.1\|2190689_2190992_-	hypothetical protein	NA	NA	NA	NA
WP_080938693.1\|2191008_2191458_-	hypothetical protein	A0A0U1ZGY3	Ralstonia_phage	1.6e-11	32.8
WP_144410652.1\|2191471_2192443_-	hypothetical protein	R4JJY3	Burkholderia_phage	3.3e-14	38.9
WP_144410653.1\|2193214_2193610_-	hypothetical protein	H6BJ44	Methylophilales_phage	4.9e-17	41.8
WP_144410654.1\|2193625_2194285_-	hypothetical protein	A0A1Y0T3P1	Sinorhizobium_phage	7.6e-23	34.6
WP_144410655.1\|2194287_2194599_-	hypothetical protein	A0A1Y0T0P7	Sinorhizobium_phage	3.7e-20	50.0
WP_144410656.1\|2194669_2195656_-	DUF5309 domain-containing protein	A0A1Y0T0F4	Sinorhizobium_phage	5.2e-84	53.8
WP_144410657.1\|2195674_2196745_-	hypothetical protein	A0A1B1INR5	uncultured_Mediterranean_phage	5.9e-25	35.0
WP_144410658.1\|2196823_2197090_-	hypothetical protein	NA	NA	NA	NA
WP_144410659.1\|2197102_2199538_-	hypothetical protein	A0A1Y0T151	Sinorhizobium_phage	1.3e-123	40.9
WP_144410660.1\|2199601_2199913_-	hypothetical protein	NA	NA	NA	NA
WP_144410661.1\|2199958_2200243_-	hypothetical protein	NA	NA	NA	NA
WP_144410662.1\|2200310_2201750_-	DEAD/DEAH box helicase family protein	A0A1Y0T3N1	Sinorhizobium_phage	4.5e-129	51.0
WP_144410663.1\|2201715_2201991_-	hypothetical protein	NA	NA	NA	NA
WP_144410664.1\|2203349_2204024_-	hypothetical protein	NA	NA	NA	NA
WP_045579034.1\|2204243_2204582_-	hypothetical protein	NA	NA	NA	NA
WP_106919333.1\|2204730_2205858_-	HNH endonuclease	A0A2R3UA83	Siphoviridae_environmental_samples	1.8e-11	30.3
WP_080938694.1\|2206029_2206599_+	HNH endonuclease	Q7Y5G7	Xanthomonas_virus	5.0e-15	36.9

DBSCAN-SWA_164

2216101 : 2219183

Streptococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045579041.1\|2216101_2217133_-	C40 family peptidase	A0A1S5SEZ8	Streptococcus_phage	1.3e-13	36.6
WP_045579042.1\|2217365_2219183_-	PhoH family protein	A0A2I7SAD7	Vibrio_phage	6.2e-75	39.0

DBSCAN-SWA_165

2223002 : 2224025

Shigella_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_034195390.1\|2223002_2224025_-	glycosyltransferase	S5FKN0	Shigella_phage	5.7e-33	30.1

DBSCAN-SWA_166

2236223 : 2238821

Cronobacter_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011884999.1\|2236223_2238821_+	ATP-dependent chaperone ClpB	K4FB40	Cronobacter_phage	1.3e-121	36.9

DBSCAN-SWA_167

2247749 : 2248865

Mycobacterium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045579051.1\|2247749_2248865_+	acetoin dehydrogenase dihydrolipoyllysine-residue acetyltransferase subunit	A0A1D8ET90	Mycobacterium_phage	8.4e-06	26.8

DBSCAN-SWA_168

2258121 : 2272595

uncultured_Mediterranean_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_006402348.1\|2258121_2258448_-	thioredoxin TrxA	A0A1J0GW78	Streptomyces_phage	1.8e-17	44.1
WP_045579055.1\|2259064_2261659_+	DNA polymerase III subunit gamma/tau	A0A1U9WR94	Streptococcus_virus	4.0e-43	37.0
WP_006755698.1\|2261773_2262100_+	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA
WP_011884980.1\|2262140_2262737_+	recombination protein RecR	NA	NA	NA	NA
WP_011884979.1\|2262785_2263991_+	CoA transferase	NA	NA	NA	NA
WP_011884978.1\|2264246_2265008_+	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	1.1e-65	54.3
WP_011884977.1\|2265004_2265934_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	8.5e-36	49.7
WP_011884976.1\|2265939_2266821_+	peptidoglycan DD-metalloendopeptidase family protein	NA	NA	NA	NA
WP_011884975.1\|2266832_2267918_+	RNA polymerase sigma factor RpoS	F4YCU2	Synechococcus_phage	2.3e-32	35.4
WP_011884974.1\|2267921_2268698_+	3'-5' exonuclease	NA	NA	NA	NA
WP_045579056.1\|2268737_2269592_-	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA
WP_106919351.1\|2269723_2271157_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	A0A2K5B251	Erysipelothrix_phage	7.0e-29	25.6
WP_011884971.1\|2271220_2271919_-	Bax inhibitor-1/YccA family protein	NA	NA	NA	NA
WP_006478674.1\|2272169_2272595_+	nucleoside-diphosphate kinase	A0A167REB2	Powai_lake_megavirus	1.9e-19	42.1

DBSCAN-SWA_169

2286766 : 2290927

Powai_lake_megavirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011884958.1\|2286766_2288113_+	adenylosuccinate synthase	A0A160ER07	Powai_lake_megavirus	1.4e-71	36.8
WP_014723093.1\|2288120_2288717_+	phosphoribosyltransferase	NA	NA	NA	NA
WP_011884956.1\|2289013_2290927_+	potassium transporter Kup	A7J6G4	Paramecium_bursaria_Chlorella_virus	9.8e-79	32.4

DBSCAN-SWA_170

2294904 : 2297154

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045579059.1\|2294904_2297154_+	ATP-dependent DNA helicase	A0A127AW80	Bacillus_phage	4.5e-75	29.2

DBSCAN-SWA_171

2314835 : 2319672

Indivirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045579066.1\|2314835_2315537_-	ATP-binding cassette domain-containing protein	A0A1V0SE00	Indivirus	5.8e-05	25.0
WP_045579067.1\|2315689_2317951_+	AsmA family protein	NA	NA	NA	NA
WP_014723081.1\|2318079_2319672_+	ABC-F family ATPase	A0A2K9L0W2	Tupanvirus	2.0e-53	26.5

DBSCAN-SWA_172

2329577 : 2331621

Ralstonia_phage(50.0%)

integrase

attL 2319547:2319606|attR 2331664:2331801

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2319547:2319606	attL	NA	NA	NA	NA
WP_045579079.1\|2329577_2330570_-\|integrase	site-specific integrase	A0A1L7DQ84	Ralstonia_phage	1.8e-76	46.9
WP_045579080.1\|2330670_2331621_-\|integrase	site-specific integrase	W6MYA3	Pseudomonas_phage	9.5e-51	39.9
2331664:2331801	attR	NA	NA	NA	NA

DBSCAN-SWA_173

2345467 : 2347201

Moraxella_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_080938699.1\|2345467_2347201_+	ShlB/FhaC/HecB family hemolysin secretion/activation protein	A0A0R6PI85	Moraxella_phage	4.3e-25	24.7

DBSCAN-SWA_174

2358620 : 2360707

Mycoplasma_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011884923.1\|2358620_2359781_+	polyamine ABC transporter ATP-binding protein	Q6GZ03	Mycoplasma_phage	1.6e-23	34.3
WP_011884922.1\|2359777_2360707_+	ABC transporter permease subunit	Q6GZ02	Mycoplasma_phage	8.3e-07	22.0

DBSCAN-SWA_175

2370123 : 2373282

Leptospira_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045579091.1\|2370123_2373282_-	efflux RND transporter permease subunit	S5VL66	Leptospira_phage	3.2e-10	18.4

DBSCAN-SWA_176

2382793 : 2385104

Acanthocystis_turfacea_Chlorella_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045579465.1\|2382793_2383759_+	D-glycerate dehydrogenase	M1I539	Acanthocystis_turfacea_Chlorella_virus	6.8e-20	28.5
WP_011884904.1\|2384060_2385104_+	LacI family DNA-binding transcriptional regulator	C6ZCU4	Enterobacteria_phage	5.1e-13	29.1

DBSCAN-SWA_177

2448244 : 2465029

Tupanvirus(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045579123.1\|2448244_2453230_-	non-ribosomal peptide synthetase	A0A2K9L3I8	Tupanvirus	1.1e-49	24.3
WP_045579471.1\|2453239_2462977_-	non-ribosomal peptide synthetase	A0A2K9KZV5	Tupanvirus	2.2e-62	29.0
WP_045579124.1\|2463289_2465029_+	cyclic peptide export ABC transporter	G9BWD6	Planktothrix_phage	1.1e-15	25.8

DBSCAN-SWA_178

2469365 : 2470217

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014723008.1\|2469365_2470217_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	9.6e-10	22.3

DBSCAN-SWA_179

2473888 : 2480622

Leptospira_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014723005.1\|2473888_2477026_-	multidrug efflux RND transporter permease subunit	S5VTK5	Leptospira_phage	8.9e-53	21.7
WP_014723004.1\|2477040_2478228_-	MexX/AxyX family multidrug efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_011884784.1\|2478379_2479045_+	TetR family transcriptional regulator	NA	NA	NA	NA
WP_041493825.1\|2479353_2480622_+	M23 family metallopeptidase	A0A222Z0G0	Rhodococcus_phage	4.7e-13	46.0

DBSCAN-SWA_180

2485696 : 2503171

Burkholderia_virus(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011884766.1\|2485696_2487001_-	MFS transporter	Q6JIH2	Burkholderia_virus	1.2e-43	30.0
WP_034193105.1\|2487248_2488928_-	SpoVR family protein	NA	NA	NA	NA
WP_011884761.1\|2488924_2490193_-	YeaH/YhbH family protein	A0A219UQP6	Bacillus_phage	4.9e-10	38.1
WP_011884759.1\|2490318_2492241_-	PrkA family serine protein kinase	NA	NA	NA	NA
WP_034193104.1\|2492771_2494565_-	Tar ligand binding domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	2.2e-08	41.8
WP_014722994.1\|2494840_2495767_-	ribokinase	NA	NA	NA	NA
WP_011884753.1\|2495763_2496795_-	LacI family DNA-binding transcriptional regulator	C6ZCU4	Enterobacteria_phage	1.8e-34	30.8
WP_014722992.1\|2496830_2497850_-	ABC transporter permease	NA	NA	NA	NA
WP_034193100.1\|2497846_2499460_-	sugar ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.5e-08	25.6
WP_045579129.1\|2499623_2500574_-	sugar ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_011884743.1\|2501105_2502032_-	CysB family HTH-type transcriptional regulator	NA	NA	NA	NA
WP_045579130.1\|2502112_2503171_-	sulfate ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	3.9e-29	35.1

DBSCAN-SWA_181

2506464 : 2510063

Cronobacter_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011884733.1\|2506464_2507112_+	transcriptional repressor LexA	F1C5A6	Cronobacter_phage	2.1e-09	42.3
WP_011884731.1\|2507138_2507477_+	hypothetical protein	NA	NA	NA	NA
WP_045579133.1\|2507506_2508214_+	DUF2939 domain-containing protein	NA	NA	NA	NA
WP_011884727.1\|2508325_2508823_-	universal stress protein	NA	NA	NA	NA
WP_014722983.1\|2509148_2510063_+	nodulation factor ABC transporter ATP-binding protein NodI	W6JKT0	Anomala_cuprea_entomopoxvirus	2.4e-27	27.6

DBSCAN-SWA_182

2515506 : 2518393

Wolbachia_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_085954464.1\|2515506_2516196_+	phospholipase D family protein	A0A1B2LRT6	Wolbachia_phage	1.6e-18	35.7
WP_045579136.1\|2516356_2516578_-	hypothetical protein	NA	NA	NA	NA
WP_011884713.1\|2516852_2517824_+	sensor domain-containing diguanylate cyclase	NA	NA	NA	NA
WP_014722977.1\|2517919_2518393_-	VOC family protein	A0A2K9L1J4	Tupanvirus	1.5e-17	36.8

DBSCAN-SWA_183

2526261 : 2527227

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045579138.1\|2526261_2527227_-	ATP-binding cassette domain-containing protein	G3M9Y6	Bacillus_virus	2.5e-30	38.1

DBSCAN-SWA_184

2542426 : 2548970

Lactococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011884656.1\|2542426_2544910_-	ribonuclease R	Q0GXV6	Lactococcus_phage	8.3e-70	33.5
WP_045579474.1\|2546182_2547430_+	ROK family protein	NA	NA	NA	NA
WP_014722957.1\|2547416_2548970_+	sugar ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.2e-13	27.5

DBSCAN-SWA_185

2557194 : 2558949

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045579143.1\|2557194_2558949_+	AMP-binding protein	A0A2H4PQM9	Staphylococcus_phage	2.0e-38	26.7

DBSCAN-SWA_186

2582933 : 2584364

Erysipelothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014722932.1\|2582933_2584364_-	dihydrolipoyl dehydrogenase	A0A2K5B2C5	Erysipelothrix_phage	2.9e-43	28.0

DBSCAN-SWA_187

2596233 : 2648624

Bodo_saltans_virus(11.11%)

transposase,tRNA,integrase

attL 2606533:2606548|attR 2632641:2632656

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014722924.1\|2596233_2597166_-\|tRNA	tRNA pseudouridine(55) synthase TruB	NA	NA	NA	NA
WP_011884590.1\|2597178_2597577_-	30S ribosome-binding factor RbfA	NA	NA	NA	NA
WP_014722923.1\|2597689_2600614_-	translation initiation factor IF-2	A0A2H4UTS4	Bodo_saltans_virus	5.2e-23	25.3
WP_011884586.1\|2600705_2602181_-	transcription termination/antitermination protein NusA	NA	NA	NA	NA
WP_011884583.1\|2602180_2602639_-	ribosome maturation factor RimP	NA	NA	NA	NA
WP_045579155.1\|2603064_2604762_-	pseudouridine synthase	NA	NA	NA	NA
WP_011884579.1\|2604822_2605845_-	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	1.4e-23	35.7
WP_045579156.1\|2606242_2607145_-	LysR family transcriptional regulator	NA	NA	NA	NA
2606533:2606548	attL	NA	NA	NA	NA
WP_011884577.1\|2607570_2607972_+\|transposase	transposase	NA	NA	NA	NA
WP_011884576.1\|2608168_2608420_+	hypothetical protein	NA	NA	NA	NA
WP_011884575.1\|2608629_2608947_-	hypothetical protein	NA	NA	NA	NA
WP_034195586.1\|2609104_2609821_+	YdcF family protein	NA	NA	NA	NA
WP_034195587.1\|2610040_2610310_+	hypothetical protein	NA	NA	NA	NA
WP_011884572.1\|2610447_2610705_+	hypothetical protein	NA	NA	NA	NA
WP_034195588.1\|2611273_2612485_-	outer membrane protein assembly factor BamC	NA	NA	NA	NA
WP_126220149.1\|2613532_2613742_+	hypothetical protein	NA	NA	NA	NA
WP_080938705.1\|2613884_2615558_+	arylsulfotransferase family protein	NA	NA	NA	NA
WP_158348957.1\|2616287_2617688_+\|integrase	site-specific integrase	A0A2H4IYX8	uncultured_Caudovirales_phage	2.8e-67	37.8
WP_045579157.1\|2618017_2620261_-	DEAD/DEAH box helicase	NA	NA	NA	NA
WP_045579158.1\|2620232_2621531_-	ATP-binding protein	NA	NA	NA	NA
WP_158348958.1\|2621527_2624257_-	TerB N-terminal domain-containing protein	NA	NA	NA	NA
WP_045579161.1\|2625209_2625587_-	hypothetical protein	NA	NA	NA	NA
WP_080938708.1\|2625605_2626637_-	hypothetical protein	Q858S3	Enterobacteria_phage	1.8e-58	36.4
WP_045579163.1\|2626777_2627062_-	hypothetical protein	NA	NA	NA	NA
WP_126221127.1\|2627125_2627587_-	hypothetical protein	NA	NA	NA	NA
WP_126221126.1\|2627634_2628081_-	hypothetical protein	NA	NA	NA	NA
WP_126221125.1\|2628094_2628394_-	hypothetical protein	NA	NA	NA	NA
WP_059889990.1\|2628678_2628876_-	hypothetical protein	NA	NA	NA	NA
WP_126221124.1\|2628913_2629156_-	hypothetical protein	NA	NA	NA	NA
WP_045579166.1\|2630126_2630369_-	hypothetical protein	NA	NA	NA	NA
WP_080938562.1\|2630726_2630957_-	hypothetical protein	NA	NA	NA	NA
WP_045579167.1\|2630967_2631288_-	type II toxin-antitoxin system PemK/MazF family toxin	NA	NA	NA	NA
WP_045579168.1\|2631281_2631530_-	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
WP_052691567.1\|2631655_2632327_-\|integrase	site-specific integrase	A0A1W6DWU1	Sphingobium_phage	4.0e-11	29.0
WP_045579170.1\|2632490_2632817_+	H-NS histone family protein	NA	NA	NA	NA
2632641:2632656	attR	NA	NA	NA	NA
WP_045579171.1\|2632947_2633739_+	SOS response-associated peptidase family protein	NA	NA	NA	NA
WP_045579172.1\|2633981_2634308_-	hypothetical protein	NA	NA	NA	NA
WP_045579173.1\|2634545_2635433_-	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA
WP_012367381.1\|2635436_2635784_-	helix-turn-helix transcriptional regulator	D2XQ11	Bacillus_virus	2.8e-08	30.6
WP_045579174.1\|2635885_2636851_+	nucleotidyltransferase	NA	NA	NA	NA
WP_045579175.1\|2636861_2637374_+	hypothetical protein	NA	NA	NA	NA
WP_045579176.1\|2637373_2638309_+	ATP-binding protein	NA	NA	NA	NA
WP_045579177.1\|2638305_2639034_+	hypothetical protein	NA	NA	NA	NA
WP_045579178.1\|2639179_2639617_-	TetR family transcriptional regulator	NA	NA	NA	NA
WP_045579477.1\|2641491_2642997_+\|transposase	IS21 family transposase	NA	NA	NA	NA
WP_045579179.1\|2642989_2643787_+	ATP-binding protein	A0A2L1IVB6	Escherichia_phage	4.4e-33	37.2
WP_080938710.1\|2643934_2644444_+	PAAR domain-containing protein	A4JWV5	Burkholderia_virus	1.5e-26	67.1
WP_080938711.1\|2644327_2644681_-	BON domain-containing protein	NA	NA	NA	NA
WP_045579180.1\|2645415_2646489_+	VIT1/CCC1 transporter family protein	NA	NA	NA	NA
WP_080938712.1\|2646579_2647002_+	DUF3331 domain-containing protein	NA	NA	NA	NA
WP_162486633.1\|2646890_2647193_-\|transposase	transposase	NA	NA	NA	NA
WP_106919332.1\|2647503_2648624_-\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	2.1e-49	39.9

DBSCAN-SWA_188

2656081 : 2718201

Escherichia_phage(22.22%)

transposase,tRNA,integrase

attL 2655014:2655029|attR 2689113:2689128

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2655014:2655029	attL	NA	NA	NA	NA
WP_045579479.1\|2656081_2657590_+\|transposase	IS21 family transposase	NA	NA	NA	NA
WP_045579185.1\|2657579_2658377_+	ATP-binding protein	A0A2L1IVB6	Escherichia_phage	2.9e-32	35.6
WP_045579186.1\|2658461_2661443_-\|transposase	Tn3 family transposase	NA	NA	NA	NA
WP_011880272.1\|2661842_2662898_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_080938715.1\|2663402_2664110_+	succinate dehydrogenase iron-sulfur subunit	NA	NA	NA	NA
WP_011880269.1\|2664541_2664754_+	hypothetical protein	NA	NA	NA	NA
WP_043292800.1\|2664874_2665240_+	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA
WP_011880267.1\|2665223_2665799_+	hemerythrin domain-containing protein	NA	NA	NA	NA
WP_126221123.1\|2666049_2666442_-	hypothetical protein	NA	NA	NA	NA
WP_106919340.1\|2666441_2667200_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_011880264.1\|2667469_2667739_-	DUF2249 domain-containing protein	NA	NA	NA	NA
WP_045579188.1\|2667777_2668317_-	hemerythrin domain-containing protein	NA	NA	NA	NA
WP_011880262.1\|2668342_2669542_-	NnrS family protein	NA	NA	NA	NA
WP_011880261.1\|2669538_2670051_-	Rrf2 family transcriptional regulator	NA	NA	NA	NA
WP_045579189.1\|2670497_2672189_+\|integrase	site-specific integrase	NA	NA	NA	NA
WP_045579190.1\|2672418_2674056_-	Na+/H+ antiporter	NA	NA	NA	NA
WP_144410671.1\|2674354_2674552_-	hypothetical protein	NA	NA	NA	NA
WP_155121927.1\|2674557_2674731_-	hypothetical protein	NA	NA	NA	NA
WP_045579191.1\|2674852_2676319_-	amidohydrolase family protein	NA	NA	NA	NA
WP_045579192.1\|2676905_2677148_-	hypothetical protein	NA	NA	NA	NA
WP_045579193.1\|2677144_2677453_-\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_045579194.1\|2677843_2678923_+	linear amide C-N hydrolase	NA	NA	NA	NA
WP_045579196.1\|2679525_2680269_+	carbonic anhydrase	NA	NA	NA	NA
WP_052691568.1\|2681908_2683021_-	EAL domain-containing protein	NA	NA	NA	NA
WP_080484355.1\|2683340_2684045_-	response regulator transcription factor	NA	NA	NA	NA
WP_080938716.1\|2684852_2685866_-	type 1 fimbrial protein	NA	NA	NA	NA
WP_080938717.1\|2686067_2688503_-	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
WP_045579200.1\|2688676_2689396_-	fimbria/pilus periplasmic chaperone	NA	NA	NA	NA
2689113:2689128	attR	NA	NA	NA	NA
WP_045579201.1\|2689464_2690016_-	type 1 fimbrial protein	NA	NA	NA	NA
WP_106919343.1\|2691313_2692131_-\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	1.9e-07	35.0
WP_080938718.1\|2692234_2695303_-	hybrid sensor histidine kinase/response regulator	A0A1V0SGX0	Hokovirus	2.4e-42	34.1
WP_045579203.1\|2695562_2696234_+	response regulator transcription factor	NA	NA	NA	NA
WP_045579477.1\|2697186_2698692_+\|transposase	IS21 family transposase	NA	NA	NA	NA
WP_045579179.1\|2698684_2699482_+	ATP-binding protein	A0A2L1IVB6	Escherichia_phage	4.4e-33	37.2
WP_059606722.1\|2700062_2701298_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_080938721.1\|2703698_2704160_-	hypothetical protein	NA	NA	NA	NA
WP_045579206.1\|2705120_2705462_-	helix-turn-helix transcriptional regulator	A0A2H4JFL3	uncultured_Caudovirales_phage	6.3e-13	39.8
WP_059862405.1\|2705603_2705978_+	hypothetical protein	NA	NA	NA	NA
WP_045579485.1\|2706101_2706587_+	hypothetical protein	NA	NA	NA	NA
WP_045579207.1\|2706989_2707709_-	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_034195589.1\|2708031_2710242_+	hypothetical protein	NA	NA	NA	NA
WP_045579208.1\|2710320_2710734_-	MerR family transcriptional regulator	NA	NA	NA	NA
WP_011884557.1\|2710795_2711182_-	integration host factor subunit alpha	A0A1P8CWT5	Bacillus_phage	4.6e-12	41.1
WP_011884555.1\|2711254_2713684_-\|tRNA	phenylalanine--tRNA ligase subunit beta	NA	NA	NA	NA
WP_006753318.1\|2713779_2714793_-\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2H4UW22	Bodo_saltans_virus	5.1e-26	38.6
WP_004192938.1\|2714941_2715301_-	50S ribosomal protein L20	NA	NA	NA	NA
WP_004191477.1\|2715331_2715529_-	50S ribosomal protein L35	NA	NA	NA	NA
WP_072465527.1\|2715719_2716244_-	translation initiation factor IF-3	A0A2L0UZ54	Agrobacterium_phage	5.3e-11	29.3
WP_045579209.1\|2716293_2718201_-\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	2.6e-124	37.8

DBSCAN-SWA_189

2735240 : 2736341

Pandoravirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011884526.1\|2735240_2736341_-	chorismate synthase	A0A291AU41	Pandoravirus	3.0e-80	43.9

DBSCAN-SWA_190

2743563 : 2744391

Pandoravirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045579217.1\|2743563_2744391_+	metallophosphoesterase family protein	S4VP02	Pandoravirus	7.8e-25	29.9

DBSCAN-SWA_191

2750769 : 2761365

Bacillus_phage(50.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045579219.1\|2750769_2752434_-	MCP four helix bundle domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	1.7e-10	43.9
WP_014722882.1\|2752838_2754077_+	MFS transporter	NA	NA	NA	NA
WP_034193315.1\|2754143_2754941_-	5'-methylthioadenosine/adenosylhomocysteine nucleosidase	NA	NA	NA	NA
WP_011884498.1\|2754937_2757301_-	UvrD-helicase domain-containing protein	S5M596	Bacillus_phage	9.9e-73	30.9
WP_041493813.1\|2757527_2760395_+\|tRNA	valine--tRNA ligase	A0A1V0SK04	Klosneuvirus	1.2e-144	39.0
WP_011884488.1\|2760480_2761365_+	UTP--glucose-1-phosphate uridylyltransferase GalU	A0A127AW70	Bacillus_phage	2.0e-71	49.3

DBSCAN-SWA_192

2775353 : 2776928

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045579225.1\|2775353_2776928_-	sugar ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.3e-15	25.8

DBSCAN-SWA_193

2785380 : 2786831

Organic_Lake_phycodnavirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045579230.1\|2785380_2786085_-	ABC transporter ATP-binding protein	F2Y2R6	Organic_Lake_phycodnavirus	3.1e-06	29.7
WP_011884438.1\|2786081_2786831_-	ABC transporter ATP-binding protein	A0A1M7XV31	Cedratvirus	1.4e-09	27.3

DBSCAN-SWA_194

2793103 : 2800930

Klosneuvirus(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045579232.1\|2793103_2795728_-\|tRNA	alanine--tRNA ligase	A0A1V0SK38	Klosneuvirus	6.4e-81	39.3
WP_045579233.1\|2795965_2797186_+	CoA transferase	NA	NA	NA	NA
WP_011884419.1\|2797421_2797985_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_011884418.1\|2798153_2798363_-	ornithine acetyltransferase	NA	NA	NA	NA
WP_045579234.1\|2798615_2800325_+\|tRNA	glutamine--tRNA ligase/YqeY domain fusion protein	A0A222YZ70	Escherichia_phage	3.4e-184	57.3
WP_011884413.1\|2800459_2800930_-	NUDIX hydrolase	A0A023W5N2	Serratia_phage	3.8e-24	45.9

DBSCAN-SWA_195

2837893 : 2839906

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011884363.1\|2837893_2838622_+	response regulator	W8CYM9	Bacillus_phage	7.6e-32	34.1
WP_011884362.1\|2838622_2839906_+	HAMP domain-containing protein	W8CYF6	Bacillus_phage	4.6e-16	25.8

DBSCAN-SWA_196

2852088 : 2854200

Ralstonia_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045579257.1\|2852088_2854200_-	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	1.7e-63	30.9

DBSCAN-SWA_197

2857835 : 2862625

Klosneuvirus(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_080938726.1\|2857835_2859023_-	hypothetical protein	A0A1V0SHS2	Klosneuvirus	2.3e-25	24.7
WP_126220110.1\|2859098_2859320_+	hypothetical protein	NA	NA	NA	NA
WP_080938755.1\|2859756_2860005_+	hypothetical protein	NA	NA	NA	NA
WP_106919311.1\|2861388_2862625_+\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	1.1e-160	98.2

DBSCAN-SWA_198

2866889 : 2867588

Streptomyces_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011884308.1\|2866889_2867588_+	peptidoglycan DD-metalloendopeptidase family protein	A0A222YW92	Streptomyces_phage	2.6e-05	43.3

DBSCAN-SWA_199

2877130 : 2888538

Bacillus_phage(50.0%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011884288.1\|2877130_2878450_-	phosphate regulon sensor histidine kinase PhoR	W8CYF6	Bacillus_phage	1.3e-34	35.5
WP_006750313.1\|2878507_2879209_-	phosphate regulon transcriptional regulator PhoB	W8CYM9	Bacillus_phage	1.7e-33	37.3
WP_011884287.1\|2879240_2879945_-	phosphate signaling complex protein PhoU	NA	NA	NA	NA
WP_011884286.1\|2879963_2880812_-	phosphate ABC transporter ATP-binding protein PstB	W8CYL7	Bacillus_phage	4.0e-16	34.2
WP_045579267.1\|2880827_2881721_-	phosphate ABC transporter permease PstA	NA	NA	NA	NA
WP_011884284.1\|2881717_2882704_-	phosphate ABC transporter permease PstC	NA	NA	NA	NA
WP_014722815.1\|2882799_2883834_-	phosphate ABC transporter substrate-binding protein PstS	A0A1D7SRJ6	Cyanophage	2.5e-44	35.6
WP_011884282.1\|2884280_2885636_-	phosphoglucosamine mutase	NA	NA	NA	NA
WP_011884281.1\|2885672_2886614_-	dihydropteroate synthase	A0A0B5J4J5	Pandoravirus	1.7e-23	32.7
WP_011884280.1\|2886642_2888538_-\|protease	ATP-dependent zinc metalloprotease FtsH	M4QMW8	Micromonas_pusilla_virus	3.3e-111	40.7

DBSCAN-SWA_200

2895233 : 2905128

Halovirus(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011884273.1\|2895233_2896379_-	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	R4TGJ8	Halovirus	4.5e-47	34.3
WP_045579269.1\|2896738_2897971_-	MFS transporter	NA	NA	NA	NA
WP_011884271.1\|2898149_2899721_-	transglycosylase SLT domain-containing protein	U5PVY0	Bacillus_phage	1.1e-06	35.5
WP_011884270.1\|2899872_2900679_-	hydroxyacylglutathione hydrolase	NA	NA	NA	NA
WP_011884269.1\|2900697_2901510_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_011884268.1\|2901506_2901950_+	ribonuclease HI	J9Q745	Salmonella_phage	8.1e-45	54.5
WP_014722808.1\|2901988_2902723_+	DNA polymerase III subunit epsilon	A0A1X9SH08	Bradyrhizobium_phage	8.4e-39	40.0
WP_011884266.1\|2902757_2903090_-	YnfA family protein	A0A218MNG8	uncultured_virus	2.2e-26	55.4
WP_011884265.1\|2903643_2905128_+	glycine betaine/L-proline transporter ProP	Q6JIH2	Burkholderia_virus	1.1e-58	32.3

DBSCAN-SWA_201

2919763 : 2920519

Moraxella_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_034193231.1\|2919763_2920519_-	TerC family protein	A0A0R6PEZ3	Moraxella_phage	2.1e-37	39.2

DBSCAN-SWA_202

2927470 : 2934844

Burkholderia_virus(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045579283.1\|2927470_2928493_-	histone deacetylase family protein	A0A2K9L473	Tupanvirus	7.9e-27	35.0
WP_045579284.1\|2928517_2929783_-	Zn-dependent hydrolase	NA	NA	NA	NA
WP_045579285.1\|2929916_2931227_-	MHS family MFS transporter	Q6JIH2	Burkholderia_virus	9.5e-41	30.8
WP_011884220.1\|2931422_2932379_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_045579286.1\|2932452_2933883_-	cytosine permease	NA	NA	NA	NA
WP_045579287.1\|2934160_2934844_-	SOS response-associated peptidase family protein	Q8W6R8	Burkholderia_virus	1.2e-71	57.3

DBSCAN-SWA_203

2944814 : 2947346

uncultured_Caudovirales_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014722782.1\|2944814_2947346_-	type VI secretion system tip protein VgrG	A0A2H4JCD4	uncultured_Caudovirales_phage	1.4e-32	30.6

DBSCAN-SWA_204

2952535 : 2953567

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045579291.1\|2952535_2953567_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	5.4e-23	30.7

DBSCAN-SWA_205

2965907 : 2971960

Virus_Rctr197k(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045579296.1\|2965907_2968259_-	AAA family ATPase	A0A1P8DII4	Virus_Rctr197k	1.8e-02	38.8
WP_045579297.1\|2968255_2971960_-	exodeoxyribonuclease V subunit beta	G3MA40	Bacillus_virus	4.2e-09	30.8

DBSCAN-SWA_206

2995014 : 2996538

Tetraselmis_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_034194200.1\|2995014_2996538_-	NYN domain-containing protein	A0A2P0VNQ4	Tetraselmis_virus	6.7e-06	33.0

DBSCAN-SWA_207

3012109 : 3012910

Paramecium_bursaria_Chlorella_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011884020.1\|3012109_3012910_-	ABC transporter ATP-binding protein	M1H3A1	Paramecium_bursaria_Chlorella_virus	5.4e-07	25.3

DBSCAN-SWA_208

3033729 : 3035562

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011883992.1\|3033729_3035562_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	2.8e-38	28.7

DBSCAN-SWA_209

3046285 : 3050038

Burkholderia_virus(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_106919311.1\|3046285_3047523_-\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	1.1e-160	98.2
WP_045579317.1\|3047657_3048047_+	DUF2513 domain-containing protein	NA	NA	NA	NA
WP_080938730.1\|3048426_3049263_-	FkbM family methyltransferase	I3UL74	Ostreococcus_lucimarinus_virus	1.5e-15	31.5
WP_126220090.1\|3049453_3050038_-	hypothetical protein	A0A0K2QQQ3	Ralstonia_phage	2.3e-31	48.1

DBSCAN-SWA_210

3062203 : 3068227

Micromonas_pusilla_virus(33.33%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045579322.1\|3062203_3063445_-	ribonuclease III	G8DDA3	Micromonas_pusilla_virus	4.3e-19	30.7
WP_011883967.1\|3063598_3064492_-	signal peptidase I	NA	NA	NA	NA
WP_011883966.1\|3064508_3066302_-	elongation factor 4	E4ZFJ7	Streptococcus_phage	2.1e-22	23.9
WP_011883965.1\|3066485_3066722_-	glutaredoxin family protein	NA	NA	NA	NA
WP_014722722.1\|3066733_3068227_-\|protease	DegQ family serine endoprotease	A0A1B1IT49	uncultured_Mediterranean_phage	8.0e-20	28.4

DBSCAN-SWA_211

3072570 : 3073704

Ralstonia_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004197638.1\|3072570_3072810_-	acyl carrier protein	B2ZXV3	Ralstonia_phage	1.6e-10	47.1
WP_011883958.1\|3072954_3073704_-	3-oxoacyl-ACP reductase FabG	Q06VL0	Trichoplusia_ni_ascovirus	4.9e-18	34.4

DBSCAN-SWA_212

3092324 : 3096817

Only_Syngen_Nebraska_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045579500.1\|3092324_3093314_-	D-glycerate dehydrogenase	A0A1J0F959	Only_Syngen_Nebraska_virus	3.8e-18	27.7
WP_045579330.1\|3093394_3094825_-	sodium:proton antiporter	NA	NA	NA	NA
WP_014722705.1\|3094868_3095531_-	lactate utilization protein C	NA	NA	NA	NA
WP_034194229.1\|3095617_3096817_-	nicotinate phosphoribosyltransferase	A0A2L0UZQ6	Agrobacterium_phage	3.9e-57	35.5

DBSCAN-SWA_213

3110335 : 3117716

Escherichia_phage(33.33%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045579335.1\|3110335_3111307_-	thymidylate synthase	Q5QC60	Escherichia_phage	2.7e-48	37.5
WP_011883881.1\|3111348_3112755_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA
WP_045579336.1\|3113209_3113566_+	hypothetical protein	NA	NA	NA	NA
WP_011883878.1\|3113802_3114303_+	dihydrofolate reductase	A0A0A0PL85	Bacillus_phage	4.3e-26	42.2
WP_014722694.1\|3114385_3115756_-\|protease	metalloprotease PmbA	NA	NA	NA	NA
WP_045579337.1\|3115875_3116496_+	ribosome-associated protein	NA	NA	NA	NA
WP_080938731.1\|3116479_3117088_+	molybdopterin adenylyltransferase	NA	NA	NA	NA
WP_011883871.1\|3117113_3117716_-	oligoribonuclease	Q8B5Y0	Diachasmimorpha_longicaudata_entomopoxvirus	2.7e-27	40.5

DBSCAN-SWA_214

3133421 : 3145210

Bacillus_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_034194145.1\|3133421_3134456_-	methionine ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	3.0e-26	33.6
WP_106919312.1\|3134630_3135602_+	alpha/beta hydrolase	A7XCB7	Tanapox_virus	1.9e-22	28.1
WP_011883840.1\|3135726_3136650_-	histone deacetylase family protein	A0A2K9KZC4	Tupanvirus	1.3e-41	35.2
WP_045579343.1\|3136820_3138044_+	lytic murein transglycosylase B	NA	NA	NA	NA
WP_011883837.1\|3138125_3139028_-	cysteine synthase CysM	A0A1X9I5F1	Streptococcus_phage	4.8e-52	39.9
WP_045579344.1\|3139233_3139581_-	helix-hairpin-helix domain-containing protein	NA	NA	NA	NA
WP_011883833.1\|3139654_3140647_-	ADP-glyceromanno-heptose 6-epimerase	R9S880	Prochlorococcus_phage	5.9e-27	30.9
WP_011883831.1\|3140710_3141661_-	D-glycero-beta-D-manno-heptose-7-phosphate kinase	A0A2H4N7X4	Lake_Baikal_phage	2.6e-16	28.5
WP_011883830.1\|3141668_3143069_-	UDP-glucose/GDP-mannose dehydrogenase family protein	A0A127AXI2	Bacillus_phage	2.5e-76	37.9
WP_045579345.1\|3143158_3144331_-	lipopolysaccharide assembly protein LapB	NA	NA	NA	NA
WP_011883826.1\|3144384_3144678_-	LapA family protein	NA	NA	NA	NA
WP_006750752.1\|3144886_3145210_-	integration host factor subunit beta	A7KV42	Bacillus_phage	6.2e-10	38.9

DBSCAN-SWA_215

3151338 : 3155883

Streptococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014722677.1\|3151338_3152421_-	3-phosphoserine/phosphohydroxythreonine transaminase	M1Q1P2	Streptococcus_phage	2.0e-84	46.3
WP_011883810.1\|3152595_3153195_-	DUF2059 domain-containing protein	NA	NA	NA	NA
WP_045579347.1\|3153279_3155883_-	DNA gyrase subunit A	A0A172JHV7	Bacillus_phage	1.8e-99	29.8

DBSCAN-SWA_216

3170908 : 3172204

Burkholderia_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045579351.1\|3170908_3172204_-	MFS transporter	Q6JIH2	Burkholderia_virus	2.1e-64	37.3

DBSCAN-SWA_217

3179110 : 3180115

Acinetobacter_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045579356.1\|3179110_3180115_+	xanthine dehydrogenase accessory protein XdhC	A0A0P0IKN7	Acinetobacter_phage	6.3e-37	34.6

DBSCAN-SWA_218

3187660 : 3188674

Klosneuvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011883759.1\|3187660_3188674_+	class 1 fructose-bisphosphatase	A0A1V0SKX4	Klosneuvirus	7.8e-51	35.8

DBSCAN-SWA_219

3195527 : 3197019

Croceibacter_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045579362.1\|3195527_3196655_-	DNA polymerase III subunit epsilon	I6R9X8	Croceibacter_phage	2.0e-15	36.1
WP_011883742.1\|3196815_3197019_-	cold-shock protein	A0A2H4N7Y6	Lake_Baikal_phage	2.0e-19	74.2

DBSCAN-SWA_220

3200612 : 3203988

Bordetella_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011883730.1\|3200612_3202979_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	A0A291L9W9	Bordetella_phage	2.6e-12	34.8
WP_006025620.1\|3203042_3203246_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA
WP_011883728.1\|3203304_3203988_-	guanylate kinase	A0A218KC48	Bacillus_phage	3.3e-13	31.7

DBSCAN-SWA_221

3219416 : 3231905

Bacillus_virus(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045579369.1\|3219416_3220952_-	HAMP domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	8.8e-14	37.5
WP_014722636.1\|3221404_3222706_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	5.1e-95	43.3
WP_045579370.1\|3222911_3223178_+	DUF2164 domain-containing protein	NA	NA	NA	NA
WP_011883689.1\|3223206_3224517_-	replication-associated recombination protein A	G3MBE0	Bacillus_virus	5.0e-82	40.7
WP_011883687.1\|3224685_3225375_-	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA
WP_011883685.1\|3225421_3227731_-	DNA translocase FtsK	G1FGP1	Mycobacterium_phage	1.1e-84	50.0
WP_045579371.1\|3228174_3229137_+	thioredoxin-disulfide reductase	G3MA85	Bacillus_virus	3.2e-62	43.6
WP_045579372.1\|3229286_3230066_+	Smr/MutS family protein	NA	NA	NA	NA
WP_045579373.1\|3230052_3230676_+	trimeric intracellular cation channel family protein	NA	NA	NA	NA
WP_011883678.1\|3230786_3231905_-	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	G9BWD6	Planktothrix_phage	5.3e-24	35.5

DBSCAN-SWA_222

3235614 : 3247252

Staphylococcus_phage(40.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045579375.1\|3235614_3237084_+	glucose-6-phosphate dehydrogenase	H6WFS4	Cyanophage	2.5e-74	34.3
WP_014722626.1\|3237158_3237839_+	6-phosphogluconolactonase	NA	NA	NA	NA
WP_011883666.1\|3237816_3239745_+	bifunctional transcriptional regulator/glucokinase	NA	NA	NA	NA
WP_011883664.1\|3239865_3241083_-	Bcr/CflA family multidrug efflux MFS transporter	S4TR35	Salmonella_phage	8.0e-26	26.8
WP_011883662.1\|3241345_3241798_+	hypothetical protein	NA	NA	NA	NA
WP_011883660.1\|3242021_3243305_+	glutamate-1-semialdehyde 2,1-aminomutase	NA	NA	NA	NA
WP_045579376.1\|3243319_3244441_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2I2L4R9	Orpheovirus	1.1e-45	35.9
WP_045579377.1\|3244825_3245344_+	DUF1993 domain-containing protein	NA	NA	NA	NA
WP_011883653.1\|3245546_3246689_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	3.7e-49	36.5
WP_011883652.1\|3246742_3247252_+	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	4.7e-20	38.0

DBSCAN-SWA_223

3255942 : 3258820

uncultured_Caudovirales_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045579506.1\|3255942_3256329_-	fluoride efflux transporter CrcB	A0A2H4J148	uncultured_Caudovirales_phage	1.2e-20	48.5
WP_045579380.1\|3256704_3257916_+	S53 family peptidase	NA	NA	NA	NA
WP_045579381.1\|3257953_3258820_-	NAD-dependent protein deacetylase	S5M4R0	Bacillus_phage	5.9e-07	22.6

DBSCAN-SWA_224

3270520 : 3271177

Streptomyces_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014722591.1\|3270520_3271177_+	protein-L-isoaspartate O-methyltransferase	A0A1J0MC50	Streptomyces_phage	4.6e-12	35.8

DBSCAN-SWA_225

3276200 : 3277755

Brazilian_cedratvirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011883587.1\|3276200_3277058_+	urea ABC transporter ATP-binding protein UrtD	A0A2R8FG22	Brazilian_cedratvirus	1.8e-11	24.6
WP_014722587.1\|3277062_3277755_+	urea ABC transporter ATP-binding subunit UrtE	G9BWD6	Planktothrix_phage	2.2e-12	26.3

DBSCAN-SWA_226

3286827 : 3288222

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045579389.1\|3286827_3288222_-	phosphomannomutase/phosphoglucomutase	A0A127AWJ1	Bacillus_phage	3.8e-56	31.7

DBSCAN-SWA_227

3291745 : 3292768

Tupanvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045579392.1\|3291745_3292768_+	UDP-glucose 4-epimerase GalE	A0A2K9L1R4	Tupanvirus	2.6e-86	48.2

DBSCAN-SWA_228

3298988 : 3303403

Staphylococcus_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045579395.1\|3298988_3299735_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	5.1e-07	22.9
WP_045579396.1\|3299756_3300539_-	ABC transporter permease	NA	NA	NA	NA
WP_080484403.1\|3301105_3302125_-\|transposase	IS30 family transposase	Q9MBM9	Staphylococcus_prophage	2.9e-45	35.6
WP_158348959.1\|3302359_3303403_-	acyltransferase	A0A2H4IZR3	uncultured_Caudovirales_phage	7.1e-23	26.8

DBSCAN-SWA_229

3310967 : 3311924

Synechococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_158348963.1\|3310967_3311924_-	NAD-dependent epimerase/dehydratase family protein	A0A1D8KNX5	Synechococcus_phage	4.8e-18	26.8

DBSCAN-SWA_230

3316268 : 3317174

Escherichia_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_080938742.1\|3316268_3317174_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	2.1e-23	31.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP009630

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP009632

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP009631

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection