CRISPRimmunity

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP011058	Paenibacillus beijingensis strain DSM 24997 chromosome, complete genome	12 crisprs	DEDDh,csa3,cas14j,RT,WYL,cas14k,Cas14u_CAS-V,DinG,cas3,TnsE_C,c2c10_CAS-V-U3,cas5,cas8c,cas7,cas4,cas1,cas2,Cas14c_CAS-V-F	4	10	3	0

1. NZ_CP011058

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP011058_1

• CRISPR_ID: NZ_CP011058_1
• CRISPR_location: 745064-745149
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP011058_1

Consensus_repeat	Method
TAAACATCAGCTGTTACAGTATTAGC	CRISPRCasFinder

spacers of NZ_CP011058_1

>1.1|745090|34|NZ_CP011058|CRISPRCasFinder
GTTATCCCTGTCGTTCTGATTTTCCGCTTTGCTA

CRISPR arrays and Neighbor proteins around NZ_CP011058_1

CRISPR arrays

The CRISPR arrays of NZ_CP011058_1

>merge|NZ_CP011058|1|745064-745149|CRISPRCasFinder
TAAACATCAGCTGTTACAGTATTAGCGTTATCCCTGTCGTTCTGATTTTCCGCTTTGCTATAAACAACAGCTGTTACAGTATTAGC

>NZ_CP011058|1|1|745064-745149|CRISPRCasFinder
TAAACATCAGCTGTTACAGTATTAGC	GTTATCCCTGTCGTTCTGATTTTCCGCTTTGCTA
TAAACAACAGCTGTTACAGTATTAGC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011058.1|WP_052702762.1|737524_742807_-|hypothetical-protein	unknown	unknown	gnl|CDD|274730
NZ_CP011058.1|WP_045669294.1|751176_752019_-|hypothetical-protein	unknown	unknown	gnl|CDD|349765
NZ_CP011058.1|WP_082084169.1|749761_751120_-|CpaF-family-protein	unknown	unknown	gnl|CDD|227297
NZ_CP011058.1|WP_045669282.1|728784_730293_-|acyl--CoA-ligase	unknown	unknown	gnl|CDD|223395
NZ_CP011058.1|WP_045669290.1|746386_746872_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP011058.1|WP_052702763.1|747904_748804_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP011058.1|WP_045669283.1|732126_733473_-|phenylacetate--CoA-ligase-family-protein	unknown	unknown	gnl|CDD|224458
NZ_CP011058.1|WP_045669292.1|748822_749758_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP011058.1|WP_082083598.1|736569_736974_-|DUF4279-domain-containing-protein	unknown	unknown	gnl|CDD|372913
NZ_CP011058.1|WP_148505335.1|728155_728746_-|4-hydroxybenzoate-synthetase	unknown	unknown	gnl|CDD|225703
NZ_CP011058.1|WP_045669288.1|737175_737508_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP011058.1|WP_052702764.1|752936_753533_-|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|224228
NZ_CP011058.1|WP_169751041.1|747567_747717_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP011058.1|WP_045669286.1|735952_736183_+|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl|CDD|197715
NZ_CP011058.1|WP_045669284.1|733863_735033_-|chorismate-synthase	unknown	unknown	gnl|CDD|235438
NZ_CP011058.1|WP_158453639.1|747327_747474_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP011058.1|WP_045669295.1|752015_752741_-|flagellar-basal-body-P-ring-biosynthesis-protein-FlgA	unknown	unknown	gnl|CDD|212159
NZ_CP011058.1|WP_082083599.1|736970_737063_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP011058.1|WP_082083597.1|730337_732095_-|AMP-binding-protein	unknown	unknown	gnl|CDD|224458
NZ_CP011058.1|WP_045669291.1|746905_747331_-|hypothetical-protein	unknown	unknown	unknown

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP011058.1|WP_045669294.1|751176_752019_-|hypothetical-protein	gnl|CDD|349765	cd03111, CpaE-like, pilus assembly ATPase CpaE. This protein family consists of proteins similar to the cpaE protein of the Caulobacter pilus assembly and the orf4 protein of Actinobacillus pilus formation gene cluster. The function of these proteins are unkown. The Caulobacter pilus assembly contains 7 genes: pilA, cpaA, cpaB, cpaC, cpaD, cpaE and cpaF. These genes are clustered together on chromosome.	2.39149e-07
NZ_CP011058.1|WP_045669295.1|752015_752741_-|flagellar-basal-body-P-ring-biosynthesis-protein-FlgA	gnl|CDD|212159	cd11614, SAF_CpaB_FlgA_like, SAF domains of the flagella basal body P-ring formation protein FlgA and the flp pilus assembly CpaB. FlgA is a putative periplasmic chaperone that assists in the formation of the flagellar P ring; CpaB is a protein invoved in the assembly of the flp pili, which are bacterial virulence factors mediating non-specific adherence to surfaces; these proteins appear to contain a single SAF domain. This intermediate family also contains the SAF domains of sialic acid synthetases and type III antifreeze proteins, which also share the same extensive core structure.	5.13136e-10
NZ_CP011058.1|WP_045669282.1|728784_730293_-|acyl--CoA-ligase	gnl|CDD|223395	COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism].	1.05757e-109
NZ_CP011058.1|WP_045669283.1|732126_733473_-|phenylacetate--CoA-ligase-family-protein	gnl|CDD|224458	COG1541, PaaK, Coenzyme F390 synthetase [Coenzyme metabolism].	1.53515e-80
NZ_CP011058.1|WP_082084169.1|749761_751120_-|CpaF-family-protein	gnl|CDD|227297	COG4962, CpaF, Flp pilus assembly protein, ATPase CpaF [Intracellular trafficking and secretion].	2.16444e-32
NZ_CP011058.1|WP_082083598.1|736569_736974_-|DUF4279-domain-containing-protein	gnl|CDD|372913	pfam14106, DUF4279, Domain of unknown function (DUF4279). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 134 and 145 amino acids in length.	5.57967e-22
NZ_CP011058.1|WP_148505335.1|728155_728746_-|4-hydroxybenzoate-synthetase	gnl|CDD|225703	COG3161, UbiC, 4-hydroxybenzoate synthetase (chorismate lyase) [Coenzyme metabolism].	4.67858e-05
NZ_CP011058.1|WP_052702762.1|737524_742807_-|hypothetical-protein	gnl|CDD|274730	TIGR03696, tRNA_nuclease_WapA, RHS repeat-associated core domain. This model represents a conserved unique core sequence shared by large numbers of proteins. It is occasional in the Archaea Methanosarcina barkeri) but common in bacteria and eukaryotes. Most fall into two large classes. One class consists of long proteins in which two classes of repeats are abundant: an FG-GAP repeat (pfam01839) class, and an RHS repeat (pfam05593) or YD repeat (TIGR01643). This class includes secreted bacterial insecticidal toxins and intercellular signalling proteins such as the teneurins in animals. The other class consists of uncharacterized proteins shorter than 400 amino acids, where this core domain of about 75 amino acids tends to occur in the N-terminal half. Over twenty such proteins are found in Pseudomonas putida alone; little sequence similarity or repeat structure is found among these proteins outside the region modeled by this domain.	1.75677e-19
NZ_CP011058.1|WP_045669286.1|735952_736183_+|helix-turn-helix-transcriptional-regulator	gnl|CDD|197715	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon. lux regulon (activates the bioluminescence operon.	1.44461e-10
NZ_CP011058.1|WP_045669284.1|733863_735033_-|chorismate-synthase	gnl|CDD|235438	PRK05382, PRK05382, chorismate synthase; Validated.	0
NZ_CP011058.1|WP_052702764.1|752936_753533_-|TetR/AcrR-family-transcriptional-regulator	gnl|CDD|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	6.3971e-15
NZ_CP011058.1|WP_082083597.1|730337_732095_-|AMP-binding-protein	gnl|CDD|224458	COG1541, PaaK, Coenzyme F390 synthetase [Coenzyme metabolism].	1.00341e-51

Protein sequences

>NZ_CP011058.1|WP_052702762.1|737524_742807_-|hypothetical-protein
MKNIIIRVLILTMFFSILPSIPSFSGTTYAAAVEEHQDSTQMDPSSDHQRKKLSDELLIPESDIQDILDQGYTLEDVEKALQRQKERGGNLSDRLDEVKPRPVNNSKSAKSTITSSLGEQTFSMSVAASTTSSPAPDYSYVKTKPDEAPFAIQLDSETVSTLSGGLSIQADDLSLPGRNGLGFTLTRTYDSNASQFEQMTIAQGSNGTQQPLEEKRFPIGKGWSWDISFLEINETGKFLHLAGSGVFKIGDNNTLVGYPWKDLSFTADTTVTVNGVTSAYVLKSIQNVSQYFNAQGQLIQISGAYNNKVTFNYANDARYGSVLSQITDPVGNSINISYTLDSVVITSSNKKVTYYKKTQNGKELLGQVVDSVGRAVTYDYSLQNAQFNLLGTTPNTGNPYALLTGVTYTTGAKSVYTFESSPVTRYIGTNAVNQVYRVKSREDRIFKSDGSIEVVNHKDISYPSSDIGSSYNTDFTFSVMVNDGTKETTFSNDKDYIDDNNPPVFYNTKISDKAIYNGITYTKTTDYTYDRARRWPVPVTTKTTDASSGTTSTYVRTSSNSYDDYGNVTASTDAAGAITSYIFNSTSHLLATVAKQINGSQLWQYTQLTRNTQGTVIKEQVFAGNSAGQTGNPLRETSYENIDPSTGNIGQIRVKNGTVNDTLTAIEYSSVYNSAFPTKTTTAIRDINGNASTITKQYQYNMADGNLTQFTDGYPSTTRYAYDALGRITKVTHPDGSFSSISYNDYLNRITLADETGVKTVTNWNPVGWKVDSGFLEGGVYKAKTKNGYDSKGRLLWTEDAFGNRTNYGYDQWSRQTSIQYPNGGLNATVVYDDISNSMSSTDPEGYVLKEYYDTLGRTVKKEETKKSGQPSTLMMYTYDNAGNMIKATDNVNPSNTTTYSYDALSQLKSVSNVVDGVTQTTSYGYNMLGNLTQITYPDNKATTKQYDELGRLIRNSVIAVSGKNNIESYYYDGNDNQTKLIDRNGSRFKYTYDNRNQLKKKEIVDTSWNPISGEETISFGYDLAGRRTSMSDGTGNTSYAYNSSTGDLKAVTFPDGKKITYDYDANGNRNVMNDPFGFNTYYHYDSRNRLDAVGPSIDFATDFDAKYQYFNDNLLKQITQRNGVTTSYTYDGKNIGTLVEKKSDGSLLNSFSYSYDNNGNLKTRTENGTTNSFIYDELNRIKTSSQFNETYRYDSRGNRTSLSTNRPFDRPDETTTFNKRDQLTSVKPASSGRVTYRYNGDGLLWERSENGQSVRYYWDGDQIIAEANVAKQKVDNTSASIVYSGAWTLSTDSSDYGGSSTYSSVATNSAEFTFTGSSVDVAMRKGAYSGKVDVVLDGTVVATDIDLYSSSYRFQQFVYTSGTLSFGKHTIKIVVKGTKNASSLNTNVVLDYIQYDNGGSSTMKARYIRGNSLVAREDSQGKAYYVQNGHGDITNLMDSSGKTVLNQYSYDIFGNISSQSESIPQMFKYSGEMQDGAVGLQYLRARWYDPSIGRFIGEDTYEGQIRNPLSLNMYTYVSNNPLIYSDPTGNWCSATVNGKYYSHPGDCNGSGNGQVHIKDSISINFGRTIYEGGVAKGKWYPKGSFHITGDKSGISDAFIGCFYDTQCSGFVGGAISSGPSVVKSGINKTSNWVKSFIGAGNASKTYANLAKQATKNIKSSEVVLGKYNQGGVSYVKVAQERGATYFELDNWDEVVSKVGENNIWNINKSFIKQQAKAGKSFILSHNPAEATGYFANEVNLLREMGYSFVRDGSIWKSIK
>NZ_CP011058.1|WP_045669288.1|737175_737508_-|hypothetical-protein
MSKKDKQWEIIEKAKKILIDWSKDNDARIYTIHFIPMFDFSLEVYVFYESDNDVLQNLNNGISDNITTMFNKSLSDLGYMKYFSENIKFVFDSHENVVNNYEGSYFFRLR
>NZ_CP011058.1|WP_082083599.1|736970_737063_-|hypothetical-protein
MYCDKHTGEILRYLKGGKGQPIETGYYISR
>NZ_CP011058.1|WP_082083598.1|736569_736974_-|DUF4279-domain-containing-protein
MSNLEKTSIIARFKIYADDFSIDDVSNVLQKDPSDFTIKGQQGKFTVAKETSWNIYTPMSESLDVNQQLGELLSILRPKKVQLLELKDKYQLNYLFSIIIKIKNNQTPAIYFEHDIIEFAHDIKAEFDIDLYVS
>NZ_CP011058.1|WP_045669286.1|735952_736183_+|helix-turn-helix-transcriptional-regulator
MNATAIFSPVTLYVSNRFDFTQREAKIYNIVIMNGYSNKEFATALDISERTVRNHFQRMMEKSGVDSTKKMMAIGM
>NZ_CP011058.1|WP_045669284.1|733863_735033_-|chorismate-synthase
MSLRFLTAGETHGPQLTAIIEGLPSNLQLDFEELNFQLHRRQLGHGRGRRMQIEKDTADIVGGVRHGRTTGAPVALVVTNNDWKHWMTVMNIQPIEGGDEAKRRVNRPRPGHADLNGGLKYNLKDLRNVLERSSARETAARVAVGAVARQLLAAFGIKVAGQVIRIGEIEAPPNNLSVDELISATEQSPVRVVDKETEAKMTAHIDQIKAEGDSIGGIVECIIEGVPVGLGSHVQWDRKLDARIAGAVVSINAFKGCEIGIGFGAGGLRGSQVHDEILYTEERGFHRASNRAGGFEGGMTTGERIVVRGVMKPIPTLYKPLRSVDIDTKKPFTAQVERSDSCAVPAASVVMEHVVAWEVARAFLEKFGGDSIEEIRANLDHYLKQVGRY
>NZ_CP011058.1|WP_045669283.1|732126_733473_-|phenylacetate--CoA-ligase-family-protein
MRSQSHKMTVSIDEHSSHLEQLKAFYNQLDDEGRTIEKLPQQVRGDYQLKAINLTLEHVWKHNEFYRSAMTAAGLQQPAIDSLDQLSSVPLLKKDVIRGDKMKLLCVDPKHIGQVHLTSGTSGKPIYTSYTLADQYVYDLLPKYLELFPESDSDIAAIALPYEFALPGLGFQRLFQFAFGTAILSLGKGGYMAPVDKSLELMKEYQATVLATTPSYAALLAEESERFGIQPGVDIRLRRILLTGEGCSNTFRKRLEQWWGCEVSFFYGSTECGVIAVECKEHQGYHVMEGHVKVEIIDPVSGAPLGYDQTGEIVVTTLLREGMPMVRYRSGDIGFLQQSQCDCGITMDVLHLRGRMENMMNLEGIDYSPFLLEHFLMEIPDVSMWYHFILDQGRLTIETEPFRTQLSDEQLAEKVRSHMLNRTGVDCQVVIKRGLPRTFGKATRVIVK
>NZ_CP011058.1|WP_082083597.1|730337_732095_-|AMP-binding-protein
MSGINRERERKFRKLLVRIAKSPLYTEKLKNFDTASIGLDQILTLPLTTKEDLRKAGAFGHLAVGINEVAQYHESFGTTGEPSASWFTIEDMELGGKQMSACGVRLAPEDLVLIRFPYAMSLPAFLMQQAARQTGAGVVPASGRTPVTPYPRVLELMKRLGVTVIAGLPREMELLAETARLLGLDPAKDFPALRAICVAGELMSERRREHIGRLWNVPVFNMYGSTETGNIAAMCEHGVMHIVEQDFVVEVLKEQGLEHAAPGAKGFAAVTTLSHQASPLLRYFNEDVVAVEPCKCSCGRTGSKLVHFGRRRDRIEFGDAVLDARDIQDAVYSLAPVPDAWKVIEGRNGLHFILDSHRGADWTEEALRAQLTGLLSVPVTVEIAAGNALLDRDDLVRNAPSKKPVYIQKLDAAVPEAPTAMSDLLDRGRRLLAARKFQESRELFEKAVALYPHSADSHAWLSAAYGRLIETGIMLEKMNLLPLLEKEIATALEIDPNHPFARRMNGARLLNTPEVLGGDPAAAADDFRYCLDQGMDEADIWVSLGECYMKLDDPHEAVRALQEALVREPGHERANELMQQVTGLQ
>NZ_CP011058.1|WP_045669282.1|728784_730293_-|acyl--CoA-ligase
MDEVSKSIARWAAINPGRLAVIDEHAVISYGELHERAGRWAGALQEAGVTPGSGVMLLLPNRAEFIEVLVATIRTDVVPFVLNSQYTPEDILSLAAAAHTGLLITTRPLAGVMTFAREVPFQIWFVEDFDYDRYPSLEALPVRRRTEIVFFTSGTTGKPKGVAVSKALFDLALPAAGSGAEPLLQLLCRPLFFRAHMTAACNILQEGNTVVLSRQAEPGVWTNLIERHRIFFVSLGPSDLTRWLDHLEKGGGKFPPSVKHIMSTGAPLTHSLKKKLKKLLPHLRTTDLYGTSELSAIAMIDDDKWADKEGSCGRPAFFVNVKITDEHGRELPPREVGEVWVKSRYRMREYYQDPEATSRACAGDYVKTGDLGFLDEHGYLYLSGRKHDIINRSGFHFFPGEVENVLQDAPDVEEAVVLGMEHPEQTQEPVAVVRLRTQDRNDAEAETDKKRELLAHCESRLARYKVPSSIWFVGEIPLNAAGKADRRELAQWIAKQKDGTFR
>NZ_CP011058.1|WP_148505335.1|728155_728746_-|4-hydroxybenzoate-synthetase
MDSPNRNTIFEFLHRLLFEILLRTDGRTTDILETLMDETMSVHVIRQEQINEEHAGLLGESSGAPYYIRESILISNKTHFVVSHNIALVCSKFVPAPMFEAISSKHEGIGKTVSALGLPTSRKVADFGWRNEQEAVDLFQKPIKLHFARENERSPFKKYAIYFESVPGIYLLEYFNPDLLRHRLKQVLNEQQRTGE
>NZ_CP011058.1|WP_045669290.1|746386_746872_-|hypothetical-protein
MYKLLFVIVMMTVWLAAHALQTDQELAVQTLFRGKHAVNRAAHAAAQQLDAAELAEGRLIIDESAASAQAARYLQANLQLDGAGNPLPGSFLKERVEVLAFEVVNGDRAFPYTYRSDLYDYDVTLHKPGVVLIVRLAYPRAFQVMEPIEWEIKGTAELTGY
>NZ_CP011058.1|WP_045669291.1|746905_747331_-|hypothetical-protein
MKQILIFVLFAAMLCWIMFSPIYKHVLIVRQALLQKEVDYLLEVGANADHGYIDAAMIEKSRERLSRFGLQPDNIEFVVSATDGKDATNPAAPLLRGTGLSLTMSYPFGRLLEIDRLIGLTPPAPDERMSASGMKMSEYVP
>NZ_CP011058.1|WP_158453639.1|747327_747474_-|hypothetical-protein
MRSILISMLLLVTVITLYLTVASGEGGTKAGLTSYGKAMADSIRNTSP
>NZ_CP011058.1|WP_169751041.1|747567_747717_-|hypothetical-protein
MRNILMTVMLLVVVVVIYNSIIADGTTGTRTRIQTQGNSANTQIGALVP
>NZ_CP011058.1|WP_052702763.1|747904_748804_-|hypothetical-protein
MDTPDWTARFIFALSLAAQYLFGLIAASALLRLLPRRRPRWMHLTAVQWQSRSVPDRWLARLALSREHPVLTERQALLAGCGFTGDAALYVLTRRLLLIFIPLLLLAAPALFHFFGYGPQLSFVWYLFPLALCIGLIWDKPSLQYVRRIRSQRITKEIYIISSQLLYLSGSSLNVHTKLMRCVPYAKTIRGDMQRMLGEWYHDAEGALRKFKLRLGTEEGLSFVETIDSLRLHEDEAYYTLLRERIQDYKEKLELIKESRKESSSYLLFVLAGIPILYTFQIFIYPWVREGQRLFDSLN
>NZ_CP011058.1|WP_045669292.1|748822_749758_-|hypothetical-protein
MMTIAVGAALAALFICLFIALQRLLLIGADSRQSAGRLNYNRNRRLGARLAAFVARFEKPHRHVSDLLESLRLSLRPEGFILMTALLLITGVTSGAILFQSVKGSLLLGVVLGLLPYAALRSMLVHRQLQTQMDFLPAVELFYQCYLITGERHIRSALKRTVEEKRMLGHVQAVFEQLYRNLSVRGDDETSLRIFSTSLGHIWGDYLVQIMRVALAEGHTVTGNLKELITDMRKSRRANEQERHKLLEIRIANFTPVLFLAFFMGINFHYNRANSYLYYVLDPQGRDMLLNAIVLIFASFLMGLWLSRKKM
>NZ_CP011058.1|WP_082084169.1|749761_751120_-|CpaF-family-protein
MPEEHEPGALMARNAETAAVERGASDAAETAPAKDFKRLAEEMRAYLAAPRGMTEEERKEYGEKLNRAVLGYLREREEILALISDRLIRLRIHQLPGGHRQYQTLAEALFAEVIGLGVLELLLREKEGLEEIQVVGTRIFEVRRGTVSRSSYSFESEKEVERIQQNLVLYNNDRINPRKRWAEVMLRDGSRVTMTGFGFTAVPTLTMRFYTARSFSLESLAASEYGTISGPLLQMLRGVLKARLNVVIIGPTNSGKTHLMKALIAELPEEERIVTLEGRLEMRLGRDFPQRNIIEYEMEEDDPMHRSAQAFKLALRQSPERIVHAEIRDEDANIYVRACTRGHSGSMTTVHASALEDVPEAVTDMCMLDNRGMNPERLVKRIAEYVTQVGIEMRIAANKRRIVRLGELRWEEGEVRVRDWAVFNETDGKWIYPEPPPPAVAAYMAAGREKEG
>NZ_CP011058.1|WP_045669294.1|751176_752019_-|hypothetical-protein
MTDQSPLIAYIGTTPNIGTTAAAFATAYRLGEESGKPVGFLCLNLKSAKLHRYLGVDTPGCTLDGLRPELRAGSLTPQKLIRACHTVRGLPGVHVLFGNMMRDQAEFFTPEEAEHLLDVAERTFSLTLLDVGAYWDNAATICGLRRAGSRVLVTTGALSHFQEDGNRWIKQVSPLFGVQPEQYEMVVIQPPWKIGGYSMKEIGKETGIAPIGEMQLNETFFSLLDSGRYEDWLRGDEQGKKAMKETSQKLMGRYGLQRKTVMTVQPWYRKLLTHRGGVGL
>NZ_CP011058.1|WP_045669295.1|752015_752741_-|flagellar-basal-body-P-ring-biosynthesis-protein-FlgA
MKVRRNALISAAAALMSGLLVYSIYVLQLRGIEHQDSVRVVVPKRFVAAGERLGADDLTYKPLAGSAYKEGMLLDAEEAEGMEAVVPLGESEPVLKWKLDRYHLLPRETESTFQLPREYVLSVSNGIRAGDSVVIYVSGDNTRSSRLFPEEVTVASVKTSGNQEVDDMTNPNLLSLADGDKEKMYASRRNANGMIEFVNLNLTEEQWLKIDSLCKDGTNKLVIAYRPLTMGTEGEAEGGAP
>NZ_CP011058.1|WP_052702764.1|752936_753533_-|TetR/AcrR-family-transcriptional-regulator
MTDDANIRDKLLKSARKMFAQKGFEGTSVRQICEDAGVNAALISYYFGGKDKIFSELFNNFFPMEQMKDILKQPLSPDEGVRLLVRGVLQFRMNNPELVKIIQFEILTNSERVPIIREHAYPVWEALRQWLQEGKELGIFKFRSLQTALGLIISVLLYPLSNPYWTGLFGEELPAGSTFIEDTTDFVLRGLYYERLEG

Crispr_ID: NZ_CP011058_2

• CRISPR_ID: NZ_CP011058_2
• CRISPR_location: 782898-783034
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 2 spacers

Consensus repeat of NZ_CP011058_2

Consensus_repeat	Method
AAAACCTGCGATAGTGCAGGCATT	CRISPRCasFinder

spacers of NZ_CP011058_2

>2.1|782922|27|NZ_CP011058|CRISPRCasFinder
ATCAACCGAAATCGCATGCCGAGAGTG
>2.2|782973|38|NZ_CP011058|CRISPRCasFinder
CCGGGCTTATATTGCCTGAACGTTAGATGGGGTCGGCA

CRISPR arrays and Neighbor proteins around NZ_CP011058_2

CRISPR arrays

The CRISPR arrays of NZ_CP011058_2

>merge|NZ_CP011058|2|782898-783034|CRISPRCasFinder
AAAACCTGCGATAGTGCAGGCATTATCAACCGAAATCGCATGCCGAGAGTGAAAACCTGCGATAGTGCAGGAATTCCGGGCTTATATTGCCTGAACGTTAGATGGGGTCGGCAAAAAAATGTATTATTGCAGGAATT

>NZ_CP011058|2|2|782898-783034|CRISPRCasFinder
AAAACCTGCGATAGTGCAGGCATT	ATCAACCGAAATCGCATGCCGAGAGTG
AAAACCTGCGATAGTGCAGGAATT	CCGGGCTTATATTGCCTGAACGTTAGATGGGGTCGGCA
AAAAAATGTATTATTGCAGGAATT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011058.1|WP_045669320.1|795212_796415_-|GTP-binding-protein	unknown	unknown	gnl|CDD|223597
NZ_CP011058.1|WP_045669309.1|778778_779282_+|copper-amine-oxidase-N-terminal-domain-containing-protein	unknown	unknown	gnl|CDD|377924
NZ_CP011058.1|WP_045669312.1|781173_782502_-|ATP-synthase-subunit-J	unknown	unknown	gnl|CDD|273349
NZ_CP011058.1|WP_148505190.1|784108_784438_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP011058.1|WP_082083601.1|769138_770071_-|sugar-ABC-transporter-permease	unknown	unknown	gnl|CDD|224096
NZ_CP011058.1|WP_045669311.1|780086_781136_+|HAMP-domain-containing-protein	unknown	unknown	gnl|CDD|380161
NZ_CP011058.1|WP_045669307.1|773630_775259_-|response-regulator	unknown	unknown	gnl|CDD|227095
NZ_CP011058.1|WP_045669314.1|784541_784766_-|hypothetical-protein	unknown	unknown	gnl|CDD|213355
NZ_CP011058.1|WP_045669319.1|794362_794974_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP011058.1|WP_045669318.1|789764_793460_-|response-regulator	unknown	unknown	gnl|CDD|274362
NZ_CP011058.1|WP_045672932.1|777206_778526_-|sugar-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|270303
NZ_CP011058.1|WP_045669306.1|771957_773436_-|glycoside-hydrolase-family-32-protein	unknown	unknown	gnl|CDD|224536
NZ_CP011058.1|WP_045672934.1|785661_786453_+|SDR-family-oxidoreductase	unknown	unknown	gnl|CDD|235546
NZ_CP011058.1|WP_045669305.1|770104_771961_-|GH32-C-terminal-domain-containing-protein	unknown	unknown	gnl|CDD|350134
NZ_CP011058.1|WP_045669308.1|775263_777045_-|sensor-histidine-kinase	unknown	unknown	gnl|CDD|225519
NZ_CP011058.1|WP_148505188.1|779376_780090_+|response-regulator	unknown	unknown	gnl|CDD|223816
NZ_CP011058.1|WP_148505191.1|784762_785407_-|hypothetical-protein	unknown	unknown	gnl|CDD|213355
NZ_CP011058.1|WP_082083602.1|786544_788872_-|response-regulator	unknown	unknown	gnl|CDD|237951
NZ_CP011058.1|WP_045669317.1|788923_789772_-|protein-glutamate-O-methyltransferase-CheR	unknown	unknown	gnl|CDD|224271
NZ_CP011058.1|WP_148505189.1|783451_783946_-|hypothetical-protein	unknown	unknown	unknown

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP011058.1|WP_045669320.1|795212_796415_-|GTP-binding-protein	gnl|CDD|223597	COG0523, COG0523, Putative GTPases (G3E family) [General function prediction only].	5.64045e-60
NZ_CP011058.1|WP_045669309.1|778778_779282_+|copper-amine-oxidase-N-terminal-domain-containing-protein	gnl|CDD|377924	pfam07833, Cu_amine_oxidN1, Copper amine oxidase N-terminal domain. Copper amine oxidases catalyze the oxidative deamination of primary amines to the corresponding aldehydes, while reducing molecular oxygen to hydrogen peroxide. These enzymes are dimers of identical subunits, each comprising four domains. The N-terminal domain, which is absent in some amine oxidases, consists of a five-stranded antiparallel beta sheet twisted around an alpha helix. The D1 domains from the two subunits comprise the 'stalk' of the mushroom-shaped dimer, and interact with each other but do not pack tightly against each other.	3.64496e-14
NZ_CP011058.1|WP_045669312.1|781173_782502_-|ATP-synthase-subunit-J	gnl|CDD|273349	TIGR00933, Trk_system_potassium_uptake_protein_trkH., potassium uptake protein, TrkH family. The proteins of the Trk family are derived from Gram-negative and Gram-positive bacteria, yeast and wheat. The proteins of E. coli K12 TrkH and TrkG as well as several yeast proteins have been functionally characterized.The E. coli TrkH and TrkG proteins are complexed to two peripheral membrane proteins, TrkA, an NAD-binding protein, and TrkE, an ATP-binding protein. This complex forms the potassium uptake system. [Transport and binding proteins, Cations and iron carrying compounds].	1.08478e-93
NZ_CP011058.1|WP_082083601.1|769138_770071_-|sugar-ABC-transporter-permease	gnl|CDD|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	3.7506e-94
NZ_CP011058.1|WP_045669311.1|780086_781136_+|HAMP-domain-containing-protein	gnl|CDD|380161	NF033092, HK_WalK, cell wall metabolism sensor histidine kinase WalK. This model describes WalK as found in Staphylococcus aureus (sp|Q2G2U4.1|WALK_STAA8). A shorter version, as found in Streptococcus pneumoniae, called WalK(Spn) or VicK, is not included. WalK is part of a two-component system and works with partner protein WalR.	1.13115e-65
NZ_CP011058.1|WP_045669307.1|773630_775259_-|response-regulator	gnl|CDD|227095	COG4753, COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain [Signal transduction mechanisms].	4.49368e-73
NZ_CP011058.1|WP_045669314.1|784541_784766_-|hypothetical-protein	gnl|CDD|213355	cd12821, EcCorA_ZntB-like, Escherichia coli CorA-Salmonella typhimurium ZntB_like family. A family of the MIT superfamily of essential membrane proteins involved in transporting divalent cations (uptake or efflux) across membranes. Members of this family are found in all three kingdoms of life. It is a functionally diverse family, including the Mg2+ transporters Escherichia coli and Salmonella typhimurium CorAs (which can also transport Co2+, and Ni2+ ), and the Zn2+ transporter Salmonella typhimurium ZntB which mediates the efflux of Zn2+ (and Cd2+). It also includes two Saccharomyces cerevisiae members: the inner membrane Mg2+ transporters Mfm1p/Lpe10p, and Mrs2p, and a family of Arabidopsis thaliana members (AtMGTs) some of which are localized to distinct tissues, and not all of which can transport Mg2+. Structures of the intracellular domain of Vibrio parahaemolyticus and Salmonella typhimurium ZntB form funnel-shaped homopentamers, the tip of the funnel is formed from two C-terminal transmembrane (TM) helices from each monomer, and the large opening of the funnel from the N-terminal cytoplasmic domains. The GMN signature motif of the MIT superfamily occurs just after TM1, mutation within this motif is known to abolish Mg2+ transport through Salmonella typhimurium CorA, and Mrs2p. Natural variants such as GVN and GIN, such as occur in some ZntB family proteins, may be associated with the transport of different divalent cations, such as zinc and cadmium. The functional diversity of MIT transporters may also be due to minor structural differences regulating gating, substrate selection, and transport.	2.18364e-27
NZ_CP011058.1|WP_045669318.1|789764_793460_-|response-regulator	gnl|CDD|274362	TIGR02956, sensor_protein_TorS, TMAO reductase sytem sensor TorS. This protein, TorS, is part of a regulatory system for the torCAD operon that encodes the pterin molybdenum cofactor-containing enzyme trimethylamine-N-oxide (TMAO) reductase (TorA), a cognate chaperone (TorD), and a penta-haem cytochrome (TorC). TorS works together with the inducer-binding protein TorT and the response regulator TorR. TorS contains histidine kinase ATPase (pfam02518), HAMP (pfam00672), phosphoacceptor (pfam00512), and phosphotransfer (pfam01627) domains and a response regulator receiver domain (pfam00072). [Signal transduction, Two-component systems].	2.27573e-62
NZ_CP011058.1|WP_045672932.1|777206_778526_-|sugar-ABC-transporter-substrate-binding-protein	gnl|CDD|270303	cd13585, PBP2_TMBP_like, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold. This family includes the periplasmic trehalose/maltose-binding component of an ABC transport system and related proteins from archaea and bacteria. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	3.59723e-100
NZ_CP011058.1|WP_045669306.1|771957_773436_-|glycoside-hydrolase-family-32-protein	gnl|CDD|224536	COG1621, SacC, Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism].	2.55057e-153
NZ_CP011058.1|WP_045672934.1|785661_786453_+|SDR-family-oxidoreductase	gnl|CDD|235546	PRK05653, fabG, 3-oxoacyl-ACP reductase FabG.	2.84529e-90
NZ_CP011058.1|WP_045669305.1|770104_771961_-|GH32-C-terminal-domain-containing-protein	gnl|CDD|350134	cd18622, GH32_Inu-like, glycoside hydrolase family 32 protein such as Aspergillus ficuum endo-inulinase (Inu2). This subfamily of glycosyl hydrolase family GH32 includes endo-inulinase (inu2, EC 3.2.1.7), exo-inulinase (Inu1, EC 3.2.1.80), invertase (EC 3.2.1.26), and levan fructotransferase (LftA, EC 4.2.2.16), among others. These enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic nucleophile and a glutamate acts as the general acid/base; a conserved aspartate residue in the Arg-Asp-Pro (RDP) motif stabilizes the transition state. These enzymes are predicted to display a 5-fold beta-propeller fold as found for GH43 and CH68. The breakdown of sucrose is widely used as a carbon or energy source by bacteria, fungi, and plants. Invertase is used commercially in the confectionery industry, since fructose has a sweeter taste than sucrose and a lower tendency to crystallize. A common structural feature of all these enzymes is a 5-bladed beta-propeller domain, similar to GH43, that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.	8.01665e-153
NZ_CP011058.1|WP_045669308.1|775263_777045_-|sensor-histidine-kinase	gnl|CDD|225519	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms].	3.53414e-43
NZ_CP011058.1|WP_148505188.1|779376_780090_+|response-regulator	gnl|CDD|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	1.63345e-92
NZ_CP011058.1|WP_148505191.1|784762_785407_-|hypothetical-protein	gnl|CDD|213355	cd12821, EcCorA_ZntB-like, Escherichia coli CorA-Salmonella typhimurium ZntB_like family. A family of the MIT superfamily of essential membrane proteins involved in transporting divalent cations (uptake or efflux) across membranes. Members of this family are found in all three kingdoms of life. It is a functionally diverse family, including the Mg2+ transporters Escherichia coli and Salmonella typhimurium CorAs (which can also transport Co2+, and Ni2+ ), and the Zn2+ transporter Salmonella typhimurium ZntB which mediates the efflux of Zn2+ (and Cd2+). It also includes two Saccharomyces cerevisiae members: the inner membrane Mg2+ transporters Mfm1p/Lpe10p, and Mrs2p, and a family of Arabidopsis thaliana members (AtMGTs) some of which are localized to distinct tissues, and not all of which can transport Mg2+. Structures of the intracellular domain of Vibrio parahaemolyticus and Salmonella typhimurium ZntB form funnel-shaped homopentamers, the tip of the funnel is formed from two C-terminal transmembrane (TM) helices from each monomer, and the large opening of the funnel from the N-terminal cytoplasmic domains. The GMN signature motif of the MIT superfamily occurs just after TM1, mutation within this motif is known to abolish Mg2+ transport through Salmonella typhimurium CorA, and Mrs2p. Natural variants such as GVN and GIN, such as occur in some ZntB family proteins, may be associated with the transport of different divalent cations, such as zinc and cadmium. The functional diversity of MIT transporters may also be due to minor structural differences regulating gating, substrate selection, and transport.	6.53273e-17
NZ_CP011058.1|WP_082083602.1|786544_788872_-|response-regulator	gnl|CDD|237951	PRK15347, PRK15347, two component system sensor kinase.	1.26111e-86
NZ_CP011058.1|WP_045669317.1|788923_789772_-|protein-glutamate-O-methyltransferase-CheR	gnl|CDD|224271	COG1352, CheR, Methylase of chemotaxis methyl-accepting proteins [Cell motility and secretion / Signal transduction mechanisms].	1.65763e-65

Protein sequences

>NZ_CP011058.1|WP_045669312.1|781173_782502_-|ATP-synthase-subunit-J
MRPMMKPHLLTPPRALAGGFALIIAIGTLLLSLPVAVNGNGLPFIDALFTAVSATCVTGLTVVDTASQFSYFGKIVLLALMQIGGLGFMTTATWFAIAFNRRISLRDQLILKESMNQSNMEGLVRLAGKVFLFSAVIELCGTIGFALRWAAEMPLGQAVWHGFFHAVSIFNNGGFELFGGFTDYAEDPFINLVTIVLVIFGSLGFIVLSELIEYPKTRSLSLHSKVVLTASGILIGAGAIVLAVFEFTNARTLGTLDWEGKLLAPLFQSVGLRSAGINTLPIAELRSATQFFMILMMFVGAAPGSTGGGIKITTFVVLLAALVAMTRGREDVVLFRRRIDRGDIYRAIAVTMLSVFVVIVATLILTAVQHENFLMLLFEAASAFGTVGYSMGLTPKLSLAGKIVVIVLMFTGRVGLITFALALQPKPRKELFRYPEGKITIG
>NZ_CP011058.1|WP_045669311.1|780086_781136_+|HAMP-domain-containing-protein
MKLRTYFVLANAVSIAVLLICLFISYSEMLLTQAQFVWLASVTGVVGLFSVFLHFILTKPIEKSLRLLTDETRQIAAGTFNAEVPLIGPSEFQTLARQFNDMSANLQASFERIRSAEQNRRELVANVSHDLRTPLASIQSYVEALQDEVVVKDDYTFKQYLATIQLETVRLAGLIHDLFELSRLEAGAEPFEPEPCDLDSLILQKLQSVALTIEQKRLHVDVSIPDRMPPVNIMPFKIQRVFANLLENAIRHSPDGGKLTICAEPHREHFIQVSIKDEGEGIPHGQQAAIFDRFYRIDPSRSRQSGGAGLGLAIAKSIIRLHRGDIGVESEAGGGSRFWFTLPVYSKPS
>NZ_CP011058.1|WP_148505188.1|779376_780090_+|response-regulator
MGIKIVVADDETNITDVCKRYLEREGYEVLTAANGDEALSLWKAHAPMLLILDLMMPQKDGWQVCQSVRDEDDVPIIILTARSEEPDRLAGLTMGADDYMTKPFSPRELVLRVKAILRRYRVPARELAEKPEAPQALDFGGLVINPSTRLVNISGKTIELTVKEFELLYLMARHPEQVFSRTQLLNKIWDISFEGDTTTVTVHVRRLREKIEPVPSEPKYIKTVWGIGYKFEGRGLS
>NZ_CP011058.1|WP_045669309.1|778778_779282_+|copper-amine-oxidase-N-terminal-domain-containing-protein
MNKWKKTAGVTVLSMALGFPAAVSAAGMSAGSMTGKEMTMQDMTMKDMTMKDMTMKDMSASDKYKGASMMTLNGMSYVSLRQVAMNLGYTVMWDPMDKSVTLSCTVKAKEMMDKKYTIKLMAGSTKIWVNGKEMMLNAAPMEKMGTTYVSKGFVEIYLVKMMSMMSK
>NZ_CP011058.1|WP_045672932.1|777206_778526_-|sugar-ABC-transporter-substrate-binding-protein
MFVSLALVGGLLAGCSGNGNNSGASGGTEGASGEKAEKKVTLTFWRNSGNDAENSAYDKLVASFMEKYPNIKVEMSPIPYSDYDTKLRTSIASGNPPDIMAIDAPNMASYAHAGALKPLTSYFQADGDLQDIPESTINTYTYNKEIYMSPLTESSIALFYNKKLFEEKGIPLPSKNPEEPWTWDQVLDAAKKINDPGKGIFGIDPAQGFNNAGATAYFKYPIVWQFGGEVMSPDGTTSKGYLDSPETKKALQFFSDLYNTEKVSALEYPPDPFPNGKLGITVDGSWSLSYLTEKFPNFKLGVDYDIAPLPKGTRQAVANGSWALGISAKSKNPDEAWKFVNWVTSAEGQKTYVGITKDIPVRYSAAKEFPELNEYPKNIFVVQDQKFGRSRPITPIFPQMSEAVNKLFEEVTIGKRNIDAAVTDAIQKIDKAYSDLPAK
>NZ_CP011058.1|WP_045669308.1|775263_777045_-|sensor-histidine-kinase
MFYSLRSRLMLAFSILLIIPFVALVYLLSEQSAKLIQQSIETSTSQTVDQFASHVSTLLTQVEDVGTQVMSNRVTQDWLTVHMNKDSRVGELLLAKQRLREYFSSYAVNNSNGISMSVFTDDAGGIWTQDRSYVDSKWYKQFKAEDRRWTEAHLDSDQADESMRTHTINSFILPLVQLQSLKTVGLVKINYDTSLLQGAIDKIRIGSTGKVFLLTANGSSVLNQDLGGQRGVLQSGLTQLNAQPKLDESGFFSIRQNREDYLLFYRKLPLQDWVILGEVPEGELYEQISRTRQTMLLVSFLLLLLVIAVAFWLSAGITKPLSAMAKAMRHVKNGEFERALKLMPKARSGHSEVGYVTGFFEQMVHRLKYLIQTEFEANLRRKNAEYKALLLQINPHFFNNSLEIISGLAALKRGDLVMDATEALGKMMRYSLNLHTDRVKVSEELDYIRDYLFILKLRHEDRLIVNMEEDPAADGLFISKFILQPLVENAVKYSLEKGAVAEVTIASRVEEERLLLSVKDNGIGMSPGLTADLMAETRQSDVTDILSSEGNSIGLRNVLSRCRLSYGSRFQLILNSEPDKGTEITLQLPLIRR
>NZ_CP011058.1|WP_045669307.1|773630_775259_-|response-regulator
MYKIMLVDDEAGVRNSIKAKMDWEAAGFEIAVEASNGKEALDALDLGENPDLVITDIRMPQMDGIAFIRECKQRYPHLRTIVLSGYSDFEYLKAAIQSGVKDYLLKPVVRSELQALLAKLADELKAERLQSMEAQLEQHAKTRQLQMLQEQTILQLVKEETFSMAALKERLQQLQLTPLAVDDLQAQFAAVEMRVMAGRLSDWNGRKDLLQLAFQMLCRETADRWKQVYPFYDVNYPSMMFFLVNVNGDEGVRHEPADAFAQELKRNMNRFLQLESVIGIGEPVTGLRQLKNGYASALWSWSQSTIHHIKRSGSESIADMSDTFSPESERKLTLAIENVDMKAFTRQLHQIFPADQDTPMFAFTFLALRVILLFMAVAKKFELGDSSLQTYLWNTQMTVRDGRSREQVLEQLQELAQLVMNEVKRTRFSNGQHMAAAVRKYVDDNYTYDLTLASLAEMFHINETYLSGLFKQNAGITFSEYVTKQRMHKARRLLEEYELKLTDIATLVGYSSSSYFSTSFKKYYGKSPKEYRDELMATSGTA
>NZ_CP011058.1|WP_045669306.1|771957_773436_-|glycoside-hydrolase-family-32-protein
MNQLEHRERIQQASETVAAQAKEAAKEQYRLHYHFMPPANWMNDPNGLIHYKGEYHLFYQHYPYADQWGPMYWGHAKSKDLVRWQHLPVALAPSEDYDRGEQNGHGCWSGSAVEHDGKLVLFYTGHVDGRDPVEVQCMAVSEDGVTFEKHAGNPVVAGPPESGLFGFRDPKVWKHGDWWYMVVGSGKDGKGRALLYRARELTDWQYVGVAAESDGTQGDMWECPDLFPLGGKHVLIISPMNMPGTKNLVMVGEMDYESGVFTPETCEKLDEGFDFYAAQTLEDADGRRIVIGWMDMWGSKMIAARRGWYGAMTIPRQLVLTPEGSVASVPVPELETLREDGRSYENVVLESGKAFLPDLPGGSSLEVIAEFDLTGDRPERIELKWITSEDEAEETVIRYDANAHTLSVDRDRSGAGDTGVCTASVAGIDAGRLKLQLFIDQSSIELFAGDGRKVLSNRIYPGGAEARLQISADGGSAQLQSLQIWKLSGMLP
>NZ_CP011058.1|WP_045669305.1|770104_771961_-|GH32-C-terminal-domain-containing-protein
MRYGKRKPLSLLLLLPLVTAALQGCKIGEEKTAEEQNQQKPPAFQYSTDPNYYTELYRPQYHLSPESGNMSDPNGMVYFEGEYHQFYQNSGQWGHAVSTDLLHWTHLPVALVRDPLGEIWSGSAVVDKNDTSGFFGGKAGLVAIFTHFQNGTQSQSIAYSSDKGRTWTKYEGNPVIPNPGLKDFRDPKVIWHEPSKSWVMVVSADNKVLFYSSKDLKTWEQTGEFGSGQGSHAAVWECPDLFELPVEGTDQKKWVLTVSIGNNEQTKGSTAQYFIGSFDGKTFTNENEPSNVLWTDYAKDFYAAISYSDIPAGDGRRIWLGWMSNWRYPFSMPTEPWKGNMSVPRALTLKDVPGEGIRLFQQPVKELESLRGSAVSVTGQNVAPGSNLLSSLKGNSYELDTEFTVASQSQFGIKLRTGEGQETVVRYDPKAAELTVDRSKSGEASFEKGFAESFAAPLKPEDGKIKLRIFVDESTLEVFGNDGKAVLTSLIFPAATSNGLELFAAGDGITLNRADFYPMRPVWRNEDPSSSKPLRIVLDKYSLDVPLNGTGAIRTAVEPLISPQQLTWESSDASVAEVRAEGENGAVVTGKKEGSVEIKASTPDGAVSAVLNVFVFKP
>NZ_CP011058.1|WP_082083601.1|769138_770071_-|sugar-ABC-transporter-permease
MANTVLNGAKTIAAGKRKADRSLRKEQLTALWFVLPAVLLLLVFVFYPMVQAFIISFQNYSLVSATKSFVGLDNYLGLLKDQSFLSSLKNSFFFAIVVIPIQTSIALGMAMLIQKPGRSSGLFRTLLFIPVVVSTAVAAVVFKLIYNKEFGILNNVLKSLHLPLTNFLSNPETAMYGVITLGIWKAAGFFMIIFLAGLNNIPNDLYEASRVDGASKIQQFFKITLPLLNRTMAFVVIITTIDAIKLSGLVFVLTNGGPNGSTETVVFYIYKLAFQQMQMGYATAAAFILFGIVLVISLIQMRLFKNDVEY
>NZ_CP011058.1|WP_148505189.1|783451_783946_-|hypothetical-protein
MRNIDIKLGLGVLLLAAAIPHGASAYAAKPNGESAQAAVVGHGMPDGDCGKQHADGSRHHPHMHRHEAWRLERLREAASYFGIQSDGKSAEQLKAEIMAMKTKDSAKWEAFKKSMKAKRFERLKQFAASQGISTEGKTEQQLRNELRALCRHKGEQPSAPKSAA
>NZ_CP011058.1|WP_148505190.1|784108_784438_-|hypothetical-protein
MMTIKYRNTCFDIEILVKYEPSDAAAPYRVNVQSAKNPLSFGNTLAVADSEEKAVKMAEQLCGFYAKAREKGYYLKGKVFVKPDHPDISAGEVLENNLSGEELDLMLAE
>NZ_CP011058.1|WP_045669314.1|784541_784766_-|hypothetical-protein
MKTLTVFTVLCTPMTVLGAIWGMNFKVMPELNLTWGYGAGLAVILLSTLGVYLWMRSKGWMGDLLRGDNKREEV
>NZ_CP011058.1|WP_148505191.1|784762_785407_-|hypothetical-protein
MQSTPYLNVGNWQWKRFDSKEEAASFYKDNESVQKWLIKTSDKKRNRISAVSYHDGRNAVHGSLVICGDIEKPEDACIFHYYLTVETLITIGFDESDVVKDCEGSDEFFKRIATRSNPVEGFIQLASGIMEPFFSGMDDFEVKLHRMEMRMKDRNGGHLFHQVLELRYSLLYWTGLTRPIREIRYALDEAFHELLGKSPLSLTTTFPITAAMKL
>NZ_CP011058.1|WP_045672934.1|785661_786453_+|SDR-family-oxidoreductase
MPRRLAGKAAFVTGAGSGIGRAAALLFAREGAKVALVDINRQRMQEVCSEISTLGAEYAPLPADIANPLEVEAAYRGCLDQFGRLDIVFANAGINGTISPLELLTPEEWKQTIDIDLTGTFYTLKYAIPALKDSGGGSVIITSSINGNRVFTNFGMGAYGTAKAGQVALMKMAALELARYKIRVNAVCPGAISTDIEASSNRKPEVDGITIPIVYPEGGHPLAGESGRPEQVAKLVLFLASDDSDHITGTEIYIDGAESLLRG
>NZ_CP011058.1|WP_082083602.1|786544_788872_-|response-regulator
MVISYDGPINILLVDDHPENLLAIEAVLGDLNYNLVKCLSGEEALRALLKDDFAVIVLDVQMPGMDGFETARMIKSRDKTKEIPIIFVSATSKETQHLYTGYAVGAIDYMLKPFVPQIFRSKIEGFVSMYVSNKKLQLQTDLLHQKKKELEKINNELLRMTYQLSKAEAMTNVVTSTSMDTMVTFDERGTILAVNKALTTMFGYGEEEVIGKPVTLLIPLLEPDISGKTAEDGSKPGIKPEEVTPRRKDGSWFFAEMKLGSTMVEGERIYACTISDISERKQSERELVRAKEAAEIAARAKTEFLAMVSHEIRTPMNGVIGMTTLLMETALNEEQRDYAEIIQKSGNTLLNVINDILDYAKIEAGKMELEEVQFQLQSCLDETLDMFIAKSRERNLDITCTIDPAIPEFVYGDATKLRQILINLVGNAIKFTNEGSIQIYVRAAEQSNQGGNRQPYKAAKNKPGLDVWQTGAPASGEETVNPLLMLEFEVRDTGVGIPDDKLPLLFKPFSQLDSSMTRKYGGTGLGLAICSNLVEMMGGTIRVEHNVPTGAVFMFTIALKRFASGKAAPSELPALPAPEEKAEPSRKGAFSFLAMLEGTVGEIGAASEREREEAEGAMRERDDAALPLGPRSVIGGNDGMSTPPRILVAEDNEVNQKLTLRLLGRLGYAADIAENGWQALEMAAAEEYDLILMDMQMPVMDGLEATRRIGENKETGSRPVIVAMTANVLPADRQRCLDAGMTDYISKPVRLEMLDDILQRYLAEGISGRGKLPAH
>NZ_CP011058.1|WP_045669317.1|788923_789772_-|protein-glutamate-O-methyltransferase-CheR
MNNSEKFSSQNDEREQVEIELLLEAVFRLHGYDFRNYAYASIRRRIWHRVNAERLATVTGLTERVLHDRDCLKRLIADMTIHVTEMFRDPEAFLSFRKAVVPLLRTYPFIRIWHAGCSTGEEVYSMAILLQEEGLYDRTRIYATDMNADVLDVAREGVFPLERMQQYTRNYMEAGGRESFSDYYTAKYDSVIFQSDLKKNIVFAQHNLVTDGSFNEFHVILCRNVMIYFNKELQNHVHSLLYDSLSMFGVISLGTKESINFTRHADRYEELDIHNRLYRKVK
>NZ_CP011058.1|WP_045669318.1|789764_793460_-|response-regulator
MKIRTKLLLGFSFLMTILLLLSSAGIRNLYNLGAQTNEVYDQRYMKVSVAMNARSQANDIATFLVNVLTVPTRETLDKNKPALEAAAANLNDAVQKLQLNYLSEYEGEMVDELAADTEEYENYMRQVINLVGQGRGEAAIQLRESEGRAYQEQLVAQIDKLANYHQRAMQNAVAQAEQDNTDTTNLMIIVTAIGILAGLVVVFWSLLSMSRGFNSLSHMINGFAKGGEAARTARLRTRPGGEFGAVADTFIALADDLDEKTAREEEHNRQMQVQTWIKTNLAGVIVGVQNENNLNSLAGKFVDAVTPLVEASYGALYVRDNLGEGRKLDLMGVYAGEDQPIAVKHFAWGEGLVGQCAADRKPMLLEQVPDSYVRIRSGFGEASPKQIYLVPVHYQSHVVAVLELATLKSFTQAHIELLQQLGENMGMVMHNAFGRNRIEELLRESQTMSEELQSQSEELMSQQDELRRSNDRLEEQTRALKRSEETLQNQQEQLEQTNEELLQKTHLLELQMKETKKQNERIEKTRDALEKQTIQLGLASKYKSEFLANMSHELRTPLNSLLILSQMLAGNKEGNLTEKQVEFATTIHASGSDLLKLIDEILDLSKIGAGKMDLVTEYVPLAELEHYVMRNFRPISQQKGVALETKVDEDVSRQIFTDGHRVKQILRNLLSNAFKFTNQGSVKLHIRRAGEHELPAGGSGGGWIAFEVRDTGIGIQEDKQSIIFEAFQQADGTTSRKYGGTGLGLAISRDLAKLLGGTLRLESEEGRGSAFTLVIPELHSGSRLELQEEGGQSDSQLFPQMAETAASRSEVSAPPKPENARSSKPELTVDLTDDLETLEQGDKLVLIVEDDIAFARILLDIARARGFKGIVALQGDKGLSYARNYKPDAILLDIQLPVMDGWSVLHQLKNHSDTRHIPVHLISVFDEIQQGLSLGAIAYLKKPTTKESLDAVFSQIESFMERNLKRLLIVEDDEAQRRSIEELIGDEDVAITGVSSGREALMELGGQHYDCMVLDLGLPDMTGFELLDQIRKNEDLHDLPIIIYTGRELEKREEMMLKKYAETIIIKDVKSPERLLDETTLFLHRIEAQMPEEKRNLLRQLHNVETIFEHKNVLIVDDDIRNVFALGSVLESYHINVLYAENGREAIEMIEKNADLDLVLMDIMMPEMDGYEAMRLIRENAKYDKLPIIAITAKAMKGDRDKCIEAGASDYFAKPVNIDQLLSLMRVWLYK
>NZ_CP011058.1|WP_045669319.1|794362_794974_-|hypothetical-protein
MRTIIGVAAACTLLLFAGLGLTLKFDSRPAAPEVQSAPVGAINSGTPLLELSAGSGEQEAENAFFKAEPHLAGGKRDFGMINGVSLSDGKADVMRKLGLPAAAPADEQLSSRTSWIYPGITIGFDGDQLNYILIPKEAGEVKVGGLTLPVDIEAWKNAFGKPDFEAEDGFGYVDANGMAAKLFVDGSSGKLTSIDFFWPMTSE
>NZ_CP011058.1|WP_045669320.1|795212_796415_-|GTP-binding-protein
MRESRKPIPVIVLAGFLGSGKTTLLTRLLERCKTSGLKPAVIVNELGEVNLDGMLVERDVPMAEMLGGCICCTSRGDLGMEIMALVQQHEPDVILIESTGAASPLEMIDGITEAAMMVRISLETIVTVVDGPELLRLGRSGKGRTYKLQRDGIVCATSLVLNKTDLLQPDERVEAEQLLRELNRYAPVVAAVRCDMDERWLDDHLKSGAEEADLKMDMKTAGSCSTGEGKHAPGCGCGHDDHGHEHGAHPHGEHSHEHGARSHSEHDHEHGARSYSGHGHEHGAHPHDEHSHEHGAHSHSGHDHVMAVTCYLDGPVDSEAFEAFLRKLPDNVYRAKGIVTFTDTASRFLFQYAYREVDFLAIRPQGDVKDVAVFIGEHFVRDEVVQPLEQLIVKSDGVPR

Crispr_ID: NZ_CP011058_3

• CRISPR_ID: NZ_CP011058_3
• CRISPR_location: 881953-882077
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 2 spacers

Consensus repeat of NZ_CP011058_3

Consensus_repeat	Method
TGTATTCGAAAAATCATATACA	PILER-CR

spacers of NZ_CP011058_3

>3.1|881975|34|NZ_CP011058|PILER-CR
CATAATGAGCGGCACACACACCGAATCAGTCGAT
>3.2|882031|29|NZ_CP011058|PILER-CR
AAACGTGATTTGAGCCCTGATTCTGTATA

CRISPR arrays and Neighbor proteins around NZ_CP011058_3

CRISPR arrays

The CRISPR arrays of NZ_CP011058_3

>merge|NZ_CP011058|3|881953-882077|PILER-CR
TGTATGCGAAAAATCATACATAATGAGCGGCACACACACCGAATCAGTCGATTCTAATCGAAAATTCATATACAAAACGTGATTTGAGCCCTGATTCTGTATATGTATTCGAAAAATCATATACA

>NZ_CP011058|3|1|881953-882077|PILER-CR
TGTATGCGAAAAATCATACATA	ATGAGCGGCACACACACCGAATCAGTCGATTCTA
ATCGAAAATTCATATACAAAAC	GTGATTTGAGCCCTGATTCTGTATATGTA
TTCGAAAAATCATATACA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011058.1|WP_045669386.1|874832_875858_+|adenosine-deaminase	unknown	unknown	gnl|CDD|238645
NZ_CP011058.1|WP_045669392.1|883134_883611_-|Na+/H+-antiporter-subunit-E	unknown	unknown	gnl|CDD|237159
NZ_CP011058.1|WP_045669385.1|873133_874411_-|maltose-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|270304
NZ_CP011058.1|WP_045669399.1|893626_895243_-|hypothetical-protein	unknown	unknown	gnl|CDD|224720
NZ_CP011058.1|WP_045669383.1|870883_871618_-|methyltransferase-domain-containing-protein	unknown	unknown	gnl|CDD|379312
NZ_CP011058.1|WP_052702774.1|877254_877800_-|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|224228
NZ_CP011058.1|WP_045669398.1|891532_892795_-|PQQ-dependent-sugar-dehydrogenase	unknown	unknown	gnl|CDD|369642
NZ_CP011058.1|WP_045669394.1|885086_885425_-|Na(+)/H(+)-antiporter-subunit-C	unknown	unknown	gnl|CDD|181497
NZ_CP011058.1|WP_045669389.1|880374_881802_-|cardiolipin-synthase	unknown	unknown	gnl|CDD|234967
NZ_CP011058.1|WP_045669395.1|885427_888331_-|Na+/H+-antiporter-subunit-A	unknown	unknown	gnl|CDD|237155
NZ_CP011058.1|WP_045669381.1|869799_870261_+|Lrp/AsnC-family-transcriptional-regulator	unknown	unknown	gnl|CDD|214628
NZ_CP011058.1|WP_045669387.1|876505_877258_-|type-I-methionyl-aminopeptidase	unknown	unknown	gnl|CDD|235576
NZ_CP011058.1|WP_045669396.1|888609_889413_-|ABC-transporter-permease-subunit	unknown	unknown	gnl|CDD|224196
NZ_CP011058.1|WP_045669388.1|877878_879948_-|PBP1A-family-penicillin-binding-protein	unknown	unknown	gnl|CDD|273955
NZ_CP011058.1|WP_045669391.1|882841_883135_-|Na(+)/H(+)-antiporter-subunit-F1	unknown	unknown	gnl|CDD|183617
NZ_CP011058.1|WP_045669382.1|870359_870815_-|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|366181
NZ_CP011058.1|WP_045669397.1|889405_890323_-|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224054
NZ_CP011058.1|WP_045669384.1|871685_872747_-|LacI-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl|CDD|224525
NZ_CP011058.1|WP_045669393.1|883615_885094_-|Na+/H+-antiporter-subunit-D	unknown	unknown	gnl|CDD|181085
NZ_CP011058.1|WP_045669390.1|882462_882879_-|Na+/H+-antiporter-subunit-G	unknown	unknown	gnl|CDD|237147

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP011058.1|WP_045669386.1|874832_875858_+|adenosine-deaminase	gnl|CDD|238645	cd01320, ADA, Adenosine deaminase (ADA) is a monomeric zinc dependent enzyme which catalyzes the irreversible hydrolytic deamination of both adenosine, as well as desoxyadenosine, to ammonia and inosine or desoxyinosine, respectively. ADA plays an important role in the purine pathway. Low, as well as high levels of ADA activity have been linked to several diseases.	3.28373e-142
NZ_CP011058.1|WP_045669392.1|883134_883611_-|Na+/H+-antiporter-subunit-E	gnl|CDD|237159	PRK12651, PRK12651, Na+/H+ antiporter subunit E.	2.72067e-64
NZ_CP011058.1|WP_045669385.1|873133_874411_-|maltose-ABC-transporter-substrate-binding-protein	gnl|CDD|270304	cd13586, PBP2_Maltose_binding_like, The periplasmic-binding component of ABC transport systems specific for maltose and related polysaccharides; possess type 2 periplasmic binding fold. This subfamily represents the periplasmic binding component of ABC transport systems involved in uptake of polysaccharides including maltose, maltodextrin, and cyclodextrin. Members of this family belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	5.16919e-101
NZ_CP011058.1|WP_045669399.1|893626_895243_-|hypothetical-protein	gnl|CDD|224720	COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane].	4.24576e-07
NZ_CP011058.1|WP_045669383.1|870883_871618_-|methyltransferase-domain-containing-protein	gnl|CDD|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	2.46601e-24
NZ_CP011058.1|WP_052702774.1|877254_877800_-|TetR/AcrR-family-transcriptional-regulator	gnl|CDD|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	5.45646e-08
NZ_CP011058.1|WP_045669398.1|891532_892795_-|PQQ-dependent-sugar-dehydrogenase	gnl|CDD|369642	pfam07995, GSDH, Glucose / Sorbosone dehydrogenase. Members of this family are glucose/sorbosone dehydrogenases that possess a beta-propeller fold.	5.81346e-111
NZ_CP011058.1|WP_045669394.1|885086_885425_-|Na(+)/H(+)-antiporter-subunit-C	gnl|CDD|181497	PRK08600, PRK08600, putative monovalent cation/H+ antiporter subunit C; Reviewed.	4.1131e-60
NZ_CP011058.1|WP_045669389.1|880374_881802_-|cardiolipin-synthase	gnl|CDD|234967	PRK01642, cls, cardiolipin synthetase; Reviewed.	3.23392e-167
NZ_CP011058.1|WP_045669395.1|885427_888331_-|Na+/H+-antiporter-subunit-A	gnl|CDD|237155	PRK12645, PRK12645, monovalent cation/H+ antiporter subunit A; Reviewed.	0
NZ_CP011058.1|WP_045669381.1|869799_870261_+|Lrp/AsnC-family-transcriptional-regulator	gnl|CDD|214628	smart00344, HTH_ASNC, helix_turn_helix ASNC type. AsnC: an autogenously regulated activator of asparagine synthetase A transcription in Escherichia coli).	5.91056e-31
NZ_CP011058.1|WP_045669387.1|876505_877258_-|type-I-methionyl-aminopeptidase	gnl|CDD|235576	PRK05716, PRK05716, methionine aminopeptidase; Validated.	5.53498e-130
NZ_CP011058.1|WP_045669396.1|888609_889413_-|ABC-transporter-permease-subunit	gnl|CDD|224196	COG1277, NosY, ABC-type transport system involved in multi-copper enzyme maturation, permease component [General function prediction only].	1.26161e-10
NZ_CP011058.1|WP_045669388.1|877878_879948_-|PBP1A-family-penicillin-binding-protein	gnl|CDD|273955	TIGR02074, Includes:_Penicillin-insensitive_transglycosylase, penicillin-binding protein, 1A family. Bacterial that synthesize a cell wall of peptidoglycan (murein) generally have several transglycosylases and transpeptidases for the task. This family consists of bifunctional transglycosylase/transpeptidase penicillin-binding proteins (PBP). In the Proteobacteria, this family includes PBP 1A but not the paralogous PBP 1B (TIGR02071). This family also includes related proteins, often designated PBP 1A, from other bacterial lineages. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan].	0
NZ_CP011058.1|WP_045669391.1|882841_883135_-|Na(+)/H(+)-antiporter-subunit-F1	gnl|CDD|183617	PRK12600, PRK12600, Na(+)/H(+) antiporter subunit F1.	3.71466e-27
NZ_CP011058.1|WP_045669382.1|870359_870815_-|GNAT-family-N-acetyltransferase	gnl|CDD|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.82368e-12
NZ_CP011058.1|WP_045669397.1|889405_890323_-|ABC-transporter-ATP-binding-protein	gnl|CDD|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	1.41773e-98
NZ_CP011058.1|WP_045669384.1|871685_872747_-|LacI-family-DNA-binding-transcriptional-regulator	gnl|CDD|224525	COG1609, PurR, Transcriptional regulators [Transcription].	4.15386e-93
NZ_CP011058.1|WP_045669393.1|883615_885094_-|Na+/H+-antiporter-subunit-D	gnl|CDD|181085	PRK07691, PRK07691, putative monovalent cation/H+ antiporter subunit D; Reviewed.	0
NZ_CP011058.1|WP_045669390.1|882462_882879_-|Na+/H+-antiporter-subunit-G	gnl|CDD|237147	PRK12586, PRK12586, Na+/H+ antiporter subunit G.	7.93718e-44

Protein sequences

>NZ_CP011058.1|WP_045669389.1|880374_881802_-|cardiolipin-synthase
MVWLVAALLVFIFQIATILILEYRKPAKTVAWLLILFVLPIIGFVMYYFLAQEYRHRRRVRKQGVIAREVQLQALRRSVLVNRPTDMDNPAFHHQERLFNLLSSFSMLPITGCNVSEVLTNGDKTYSSMLSAMEGARHHIHLDFYTFRSDATGERFKEVLVRKASEGVEVRLIYDGVGSIDIRSSFVNELRDAGVQVQCFLAPRIAFFDKRINYRDHRKITVIDGTAGFVGGINIGDEYLGMDKKLGFWRDTHLRLEGDAVYYLQLIFMRDWWFTAREKLDDAVYMPEHRCRGTEQVQIVASGPDSNADSVLESMFSAIAAATKRIYIATPYFIPDHSVLMGLRTAALSGVDVRLILPHVSDSKLVMYASLSYVQELLEAGVRIFRYRKGFLHAKVLIVDELVAAVGTANMDLRSFFSNFEINAMLYDKGAIRRLEQDFIQDLDDSYELNLHTYASRSRRQRAYEVVAHMLSPLL
>NZ_CP011058.1|WP_045669388.1|877878_879948_-|PBP1A-family-penicillin-binding-protein
MKAENAARKSKSKSKRTIFRWALLIAAGLIVVGCAAGWGVFRMLVAVQDVSLLDKPLPSATIIYDHTGNEASRIAQNVIEPVGYDAMPKHLIEAVVAIEDKRFFEHDGMDLRGIMRALFTNITAGGTVQGGSTITQQLAKNVFLSHERTWKRKWSEVLLARKIEENYDKPKIMEMYLNKIYFGEGAWGIKRAAETYFGKPVSRLTLSESALLAGLIKAPSALTPYKHPEKAKERRNLVLETMREQGFIDEQTCKQASRIPVMLKGAKPDRTNGIKHPYYVDQIIREASNLYGLSENDVLHGGLRIYTEMDPHMQQTAERVYANDSLFPESSSDQLIQSGSVLVDPRDGGIRALVGGRGDQPFRGFNRAVQLKRQPGSTMKPIAVYTPALERGYSPEDTLLDEPVDFGGYQPKNAGGSYHGEVTLYEALIHSYNVPAVRLLDEIGIDAGMDAAARFGLKLTDADRTLGLALGGLQEGVSPLEMAEAFGVFASDGVRMPAHTIKRIETADGAVLAEAGSPSGVKTTEQLVARTMTAMLEGVVREGTGEAAALADRPVAGKTGTTQMPGTNGEGAKDNWFVGYTPQLVCAVWLGYDQSDSSHFLTTTSKAAAAVFHAIMSEALQDEPVQPFPAVSVDQKKEKREDKERIKPKSEERESTDKHKDKDKHEDKGKGRDKDDEKRKGKDHRNEDD
>NZ_CP011058.1|WP_052702774.1|877254_877800_-|TetR/AcrR-family-transcriptional-regulator
MVAKGNQYDIRDVAKEAGLGYGTVYHYYSNKEILLREVMEAGLAIAAEVTGQIFASHESPVQQLESYCNALLQTWMLHTSVYLVYKAASENYCNLDEMFRQQLSVQFQHELYKPLAECVERAMEAKEIGVQLKAESLSNGLLGSLIGSYGIYLYHQEMPPDPSIITELLLRGLREGKGDNR
>NZ_CP011058.1|WP_045669387.1|876505_877258_-|type-I-methionyl-aminopeptidase
MIIIKTMDEIQQMKAAGQIVAACHKEIANMIKPGVTTLEINNYVEKFIANRGAEPYTIGYNGYEYATCAAVNDVIAHGFPSGTPLKNGDIVTIDIVAKYNGWVGDSTWSYAVGEVSAQARKLMNVTKECLYLAIRQAVVGNRIGDVTHAIQSHAESHGFSVVRDLMAHGVGRDLHVEPSYAHVGSPGKGFRLKAGMVITIEPMINEGTYRMTVDPDGWTARTADGKWSTQYEHTVAITEDEPVILTEQYN
>NZ_CP011058.1|WP_045669386.1|874832_875858_+|adenosine-deaminase
MNELINRLPKIELHCHLDGCVRPQTLADIARREGIELPAGSLEELTTLMKVPPSCSSLVEALKCFELPLKCMQTPYALERIAMELAEDAARENVKYIEVRFAPHLHTEQGMTVEDAIVSVGAGLAAAEKKTDIIARMIVTCMRNHSVEVNIEAVRAAAKFLGKGVVGVDLAGDEENFPPELHEKVFQLADELGIPVTIHAGEAGGANNIRTAVERLHARRIGHGVRLYEDAGAQQLLHDRNIPLEMCVTSNVQSKAVDSLEKHPIRSYLERGIGVTVNSDNRTVSDTDLTKEYQLLADHFQFKAADFKKVAVQAIEAAFVEPELKPELLRKFQEEWDKLGI
>NZ_CP011058.1|WP_045669385.1|873133_874411_-|maltose-ABC-transporter-substrate-binding-protein
MKKKLALLVLSAVMMLTVAACGGKPQQQAEQQPEQPAANEAEASDELQPEPGAELVLWAGKSAYTEYAAQEFEKKYNIKVKIEEVNSWDSPGRLSTDGPAGTGGDVVEIVSDALGTSVNSGIVLPNDYFEEETRSSMSQLSIDSSTYNGILYGYPRDIYTYALFVNKELVKDTKFETWDDIVAFAKKFNDIPSNKFGFMFDPSHWYLNSSFMLGYGGYIFGKNGTDTSDIGMNNEGAVKGLEFLQTLKATLPFKAADLTGDLKSGLFEQGKVAINFDGSWAASSFRKLPFEVGVIPLPAMPGGQYPLSLIGTHSFYVSAYSKYPNAAKLFANFLTSKEMLAKDYETNGFIPAVKGLEDNEKFKNDEIVQGFMKQLEHSQVMPNVPEMSQYSQVLTPALVSIWDGGNVKQVLDKAADNLKTSIANK
>NZ_CP011058.1|WP_045669384.1|871685_872747_-|LacI-family-DNA-binding-transcriptional-regulator
MATINDIAKYAGISIATVSRALNKPELVNAETRERVMYAARKLNYFKNETLKILNVKSNKLSIGVIFPYITAYYFSELYSGISKAAKLHDIDLVLYELRSENMSKEGLEDALSFARRHLVDGIMLAGYVPSVYDEIFESLDIPVVLLLGTHESAKMSAYKVDDIRAAFDAISFLVSRGHRNIGMISLPLTDPANDIVSRFMGYKQGLDFYKLPFSEEMVAYGKLGFDDGYSAMKQLLAAREKTGITAVFTAADEVAIGAMRCIQDAGLRVPQDISVIGFGNLSIANISSPKLTTVAQPFEDIGAEGVKYMTKLLTEPGSVVERGNFYLPYKIIERESVAAIMNRSFSYCDGKV
>NZ_CP011058.1|WP_045669383.1|870883_871618_-|methyltransferase-domain-containing-protein
MKQNKYDDLGFFEKYSQMPRSTGGLNAAGEWPAFRALLPELRGKRVLDLGCGYGWHCRYAREQQARSVVGVDLSEKMLERARENTNDSAIEYRRLAIEDIDFAAGEFDLAISSLALHYVERFDNVCRKVHHGLVPGGAFILSVEHPVFTALAAQDWHYGPQGERLHWPVDDYQNEGARLTSFLDHDVVKYHRTVAAYVNALLDSGFSLTKLSEPQPTPEMLAKYAEMRDETRRPIFLLIAAVKN
>NZ_CP011058.1|WP_045669382.1|870359_870815_-|GNAT-family-N-acetyltransferase
MIAKLWIAKEETARQVLAVQIPAYEVEAELIQFHDLPPLKETIGSLTACGESFYGFFEQGELAGVISYKKEDDTVDIHRLIVHPAYFRRGIAQALLRFVERLEQSAAKFVVATAARNNPAKNLYLKNGFLQVKEQEVAPGLSLSFFEKRKL
>NZ_CP011058.1|WP_045669381.1|869799_870261_+|Lrp/AsnC-family-transcriptional-regulator
MDHVDKQILFYLQNQARISMTELGKCVGLSQPAVTERVRRLEEKGIIEEYRTIISSEKIGKKAAAYILFRTRDCHAFLDFCRSSPDVVECYRISGEHNYLLKVITDSTRSLEQFGNQCDKYGTYTILIVMSSPIDHKFLIPALEEANVLTELE
>NZ_CP011058.1|WP_045669390.1|882462_882879_-|Na+/H+-antiporter-subunit-G
MSLNAETIMGAGELLIGLLVLFGALVSALSAFGLIRLPDVYLRSHAATKSATLGVLAVLTGAFLYFMFYLGHVSAKLLLGIVFVFMTGPVAGHLNGRAAYRTGVSLWRHSVRDDLKGELKRAREEREKREVREEREEW
>NZ_CP011058.1|WP_045669391.1|882841_883135_-|Na(+)/H(+)-antiporter-subunit-F1
MLSNLLLASLILLSLAVLGCLYRLIKGPSMADRIAALDTIGVILLSMIAVICMLFQTRAYFDIILVIGILTFIGTTAFARYIERGDVIERGDDNGSR
>NZ_CP011058.1|WP_045669392.1|883134_883611_-|Na+/H+-antiporter-subunit-E
MALQILLNLVVAVVWMFLSGEWSYPRFAVGYLLGMALIGLLHRFWPEGFYMKRVWAVVKLLLLFLKELVVSSFTVMGQIVRPKLNIRPGIFAYATELKSDWEVTLLSCLICLTPGTLTLDVSRDGRTLYIHAMDIEDTELLSKQIKGTFEKAIMEVTR
>NZ_CP011058.1|WP_045669393.1|883615_885094_-|Na+/H+-antiporter-subunit-D
MNNLIVFPLLIPLCTAVLLIFLNGRLALQRWISMFGVLLCAASAAVMVYQVGHRGIQTLQMGGWMAPYGIVFVADMLAALLVLTTSVVAAACLLYAFRTIGEQRERHYFYPFFHFLLAGVSGSFLTGDLFNLFVCFEVLLIASYALIVLGGTKRQLRETLKYILINIVSSTLFVAAVAYLYGVVGTLNMAHLSVRVAEAGQGGMLNVIAVLFLIVFALKAGLFLFFWLPGSYSAPPAAVSALFGALLTKVGLYAIIRVFTLIFYHDAGVAHDLIGWMAASTMILGGIGAIAFSDIYRILNYNVVISVGFIAFGIAVASRDALDGAVFYLLHDMVAKALMFMLGGMIIQAAGTSRLQEMGGMIKRYPLLGWMFFIVALALVGIPPLSGFPGKLLMVRGGLADHEYALTAIGLASSFLVLYSMMRIFIQAFFGEEKSDPQPQLPPGKGTVYSAVGLCVLIVLLGIGSEWVYSFVSQASDALVHPSVYIDAVLKE
>NZ_CP011058.1|WP_045669394.1|885086_885425_-|Na(+)/H(+)-antiporter-subunit-C
MELYMSLAIGVLFAVGVYLILSKSLLRIILGTSLLTHGVHLLLLTMSRPKKGAPPLLGEHAKSYVDPLPQALILTSIVISFGVTSFFFVLAYKAYQKLGTDDMEQLKGDQDE
>NZ_CP011058.1|WP_045669395.1|885427_888331_-|Na+/H+-antiporter-subunit-A
MSLLHVAIIVPFLLASAVPLLGRLLRRVHAGWLVLPGPAVLFGYFVSRIPFVRQGGEFASLPWMPSLGIDFTVQLDGLSLLFALLISGIGSLVVLYSIFYLDKNKEQVRTFYVYLLLFMGAMLGVVLSDNMMVLYGFWELTSISSFLLIAFWHHRERSRYGALKSMLITVFGGLAMLAGFILLYVMSGTFSIRGIIDQAGTLAAHELFIPAMLLILLGAFTKSAQFPFHIWLPDAMEAPTPVSAYLHSATMVKAGLYLVARFNPFFAGAAEWFWLVSGFGLMTLIYGSFRALKQTDLKAMLAFSTVSQLGLIMSLLGLGSAAASAAGAEALLYTGAVTAAVFHIVNHAAFKGALFMVADIVDHETGTRDIRKLGGLLPLMPVTFTIALFGTFSMAGLPPFGGYLSKEMFLMAVLDTLHMDVWNAQTWSVLIPAVAWMASVFTFVYSMILLFRTFTGPLQPDKLERKPHEAPLGMLIPPAVLGLLALVFGLFPNLLSHSLIEPAIAAIVPRTLPADEHLAVHIAFWHGWTPEVFMTAGIIAAGIVLYKLHRWFKPLREPLFTRISLNRAYDWSLSTAERGAARLTGAYMTGSVRDYLSYIFVFFIAALGITMFLSGSLRIDMSQYAPLSLYEAVIIAVLIVSAAAVPFARSRLMAIIWTGAAGYMVTLFFVLFRAPDLALTQMIVETVSVTLFLLCFYHLPKLKREVSALRFKLTNFLIATGVGAVVTLIALGASGSPTFGSISEFFLQESYHSAGGKNVVNVILVDFRGFDTLLEITVLGIASLGIYALIKLSLDPDDAAGGSRLRTGRREPHAVRMKGKRRPDIHLPASNDVILRTVSKAVIFLILTFALYLFFSGHHEPGGGFIAALLTSSALVLLSMAFGMNTMEQVIPVDFRSLTAAGLMIALLTGIGSFLFDAPFLSHAFGYFDLPLLGRTELATAVLFDLGVYLSVVGVTMTIIFTIGRDI
>NZ_CP011058.1|WP_045669396.1|888609_889413_-|ABC-transporter-permease-subunit
MFDFWQLVRNENMKLYRRIRTWIMLAFPVIGVLAVSLIANSVSSGQPSMWTMMLYESLVMLQLVTIFTVVVAADSVAGEFSAGTIKLLLIRPWSRSKILLSKYVSLLLFSLLSTVILFAAAVVINMIVFGYSGGQASAIADLGTNLNVGVWNYMLSYYALQWISMVVVITLAFMLSTVFRSNGLAIGLSLFIVLMGSTIATLLRAMMERYEWIEYIFLVHLNLTGYLSGAPGDNGMTFGFSLGVLAVYYVLFLAVTWTLFRKRDVAA
>NZ_CP011058.1|WP_045669397.1|889405_890323_-|ABC-transporter-ATP-binding-protein
MSAEPIVQLRDVTKRIGNRTIIDKLTLDVPRGEVFGFLGPNGSGKTTTIRMMVGLMSLTDGEIVIGGSSIRTEFEKAIRHVGAIVENPEMYKYLTGYQNLLHYARMIPGITKERIDEVAELVGLKERINEKVRGYSLGMRQRLGVAQAILHKPSLLILDEPTNGLDPAGIRELRDYLRRLAQAENTAVFVSSHLLSEMELMCDRVAIIQTGKLIDVRPIREVNAAAVAVAVVRLEVDRPEEAARLLGAFNARVEDGQLAVEADRESVADINKQLVEAGLRVYGIRTVSKSLEDQFLEITGGEQIV
>NZ_CP011058.1|WP_045669398.1|891532_892795_-|PQQ-dependent-sugar-dehydrogenase
MKDVRRWTAAALLCCLVLSGCRIGDGSSEQSRTGQTGTEQAPPQETMDPPNQTPPDKEAAPPSSGSEDNASTAELPYAPEVAASGFEVPWELKAAPDGRLFFTERTGNLRVIENGKLVDEPVLQLDEGLYRQSEAGLLGLELDPDFAENHYIYVYQSYIDGGPPKNRVIRLVESGNKARIDKVILDGLPGYPYHDGGRIKFGPDRMLYITSGDAGEPMNAQDLNHLGGKILRISPDGSIPGDNPFPGSPVYSLGHRNPQGLAWHPETGQLYSSEHGQSAHDEVNLIAAGANYGWPLIQGDETRVKPEDESGRGVGPLKTPILHSAEDTWAPSGITFVTKGPWAGNLLVANLRGTQILRLDLSEDGSSVRSVDKLFQDELGRIRNVTETADGSIYILTSNRDGRGDPGKDDDRIIRLRPLF
>NZ_CP011058.1|WP_045669399.1|893626_895243_-|hypothetical-protein
MIKTSKWPAILVGLVVFTLELVVGIWMAHVNLFLPGDALSRVANAYYVLYSRDPHLGAIGFIWNPLPSLLEIPILLFKPLLPELATEGLVGVLLTSSFAAATAVLLFRHYRARGHSIWIALTFVALFSFNPFIFLYGSNGMSEILFIFFLVWAVTSLLDWMDSQKVVSVIFSGFALAFAFLTRYETVAFGAFMALGVALIILRRRIVADEKQSFRVTYHRFEATELIFMLPVIYTGLLWILLNYTIMGDPLYFLRSNYSNIGQSAGLSSNLTIGPVIGNLTAALRFSWEKSVCFLLPLIAIIGMRLTRKELFRVEFFLLLLMITAIPIMQVYMLYKGSSYGWFRFFVYPLPMIAAWLPYELQKQKSQRKLIYILSCLLTFMLLVSSSIWTGRIMQNATLAQEEYEAIHFSESSTHQQILMAKQIASDLDQRIEEKKVTVLMDSFVSFWTILYSKHPDHLVITSDRDFAESLLDPVGSDIDYILVPKPEAIAALEAVNQKYGDFYFKGTDFAVLDTEYGDKWRLFRVIQKDKGNQPVQQ

Crispr_ID: NZ_CP011058_4

• CRISPR_ID: NZ_CP011058_4
• CRISPR_location: 963940-964035
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP011058_4

Consensus_repeat	Method
TTTTGAGTATTATCCCATTAACTCAGAAT	CRISPRCasFinder

spacers of NZ_CP011058_4

>4.1|963969|38|NZ_CP011058|CRISPRCasFinder
TTCTCAGTCCATGAACGTATGGTGGTGTTTGAACACCT

CRISPR arrays and Neighbor proteins around NZ_CP011058_4

CRISPR arrays

The CRISPR arrays of NZ_CP011058_4

>merge|NZ_CP011058|4|963940-964035|CRISPRCasFinder
TTTTGAGTATTATCCCATTAACTCAGAATTTCTCAGTCCATGAACGTATGGTGGTGTTTGAACACCTTTTTGGGTATTATCCCATTAACTCAGAAT

>NZ_CP011058|4|3|963940-964035|CRISPRCasFinder
TTTTGAGTATTATCCCATTAACTCAGAAT	TTCTCAGTCCATGAACGTATGGTGGTGTTTGAACACCT
TTTTGGGTATTATCCCATTAACTCAGAAT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011058.1|WP_045669432.1|952579_953647_-|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl|CDD|223745
NZ_CP011058.1|WP_045669445.1|969662_970097_-|BrxA/BrxB-family-bacilliredoxin	unknown	unknown	gnl|CDD|377667
NZ_CP011058.1|WP_045669444.1|968834_969644_-|ammonia-dependent-NAD(+)-synthetase	unknown	unknown	gnl|CDD|234831
NZ_CP011058.1|WP_045669436.1|961215_961431_+|substrate-binding-domain-containing-protein	unknown	unknown	gnl|CDD|380629
NZ_CP011058.1|WP_082084173.1|953785_954673_-|MBL-fold-metallo-hydrolase	unknown	unknown	gnl|CDD|378930
NZ_CP011058.1|WP_045669446.1|970559_972245_-|PAS-domain-containing-protein	unknown	unknown	gnl|CDD|236901
NZ_CP011058.1|WP_045669448.1|973610_974891_+|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl|CDD|367519
NZ_CP011058.1|WP_045669438.1|961871_962756_-|LysR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|223656
NZ_CP011058.1|WP_045669434.1|958150_959260_-|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl|CDD|223745
NZ_CP011058.1|WP_045669439.1|962886_963798_+|PhzF-family-phenazine-biosynthesis-protein	unknown	unknown	gnl|CDD|223461
NZ_CP011058.1|WP_045669441.1|965992_967516_-|A/G-specific-adenine-glycosylase	unknown	unknown	gnl|CDD|224115
NZ_CP011058.1|WP_045669442.1|967949_968288_+|cytochrome-c	unknown	unknown	gnl|CDD|379187
NZ_CP011058.1|WP_082084174.1|957119_957977_-|hypothetical-protein	unknown	unknown	gnl|CDD|227604
NZ_CP011058.1|WP_045669443.1|968417_968828_-|holo-ACP-synthase	unknown	unknown	gnl|CDD|234610
NZ_CP011058.1|WP_045669433.1|955421_956588_+|virulence-factor	unknown	unknown	gnl|CDD|379361
NZ_CP011058.1|WP_045669440.1|965331_966006_-|bifunctional-4-hydroxy-2-oxoglutarate-aldolase/2-dehydro-3-deoxy-phosphogluconate-aldolase	unknown	unknown	gnl|CDD|223871
NZ_CP011058.1|WP_045669431.1|951642_952407_-|acyltransferase	unknown	unknown	gnl|CDD|224748
NZ_CP011058.1|WP_045669447.1|972369_973230_-|alpha/beta-hydrolase	unknown	unknown	gnl|CDD|378820
NZ_CP011058.1|WP_052702783.1|959517_960969_-|glycoside-hydrolase-family-32-protein	unknown	unknown	gnl|CDD|350134
NZ_CP011058.1|WP_158453646.1|970308_970449_-|hypothetical-protein	unknown	unknown	unknown

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP011058.1|WP_045669432.1|952579_953647_-|Gfo/Idh/MocA-family-oxidoreductase	gnl|CDD|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	7.24117e-73
NZ_CP011058.1|WP_045669445.1|969662_970097_-|BrxA/BrxB-family-bacilliredoxin	gnl|CDD|377667	pfam06491, Disulph_isomer, Disulphide isomerase. This family of proteins has disulphide isomerase activity, EC:5.3.4.1. It has a similar fold to thioredoxin, with an alpha-beta-alpha-beta-alpha-beta-beta-alpha topology. It has a conserved CGC motif in the loop immediately downstream of the first beta strand. This motif is essential for activity.	7.82735e-93
NZ_CP011058.1|WP_045669444.1|968834_969644_-|ammonia-dependent-NAD(+)-synthetase	gnl|CDD|234831	PRK00768, nadE, ammonia-dependent NAD(+) synthetase.	2.2094e-110
NZ_CP011058.1|WP_045669436.1|961215_961431_+|substrate-binding-domain-containing-protein	gnl|CDD|380629	cd19974, PBP1_LacI-like, ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. This group includes the ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type 1 periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA binding affinity of the repressor.	5.58699e-18
NZ_CP011058.1|WP_082084173.1|953785_954673_-|MBL-fold-metallo-hydrolase	gnl|CDD|378930	pfam12706, Lactamase_B_2, Beta-lactamase superfamily domain. This family is part of the beta-lactamase superfamily and is related to pfam00753.	4.45841e-15
NZ_CP011058.1|WP_045669446.1|970559_972245_-|PAS-domain-containing-protein	gnl|CDD|236901	PRK11360, PRK11360, two-component system sensor histidine kinase AtoS.	1.72038e-55
NZ_CP011058.1|WP_045669448.1|973610_974891_+|NAD(P)/FAD-dependent-oxidoreductase	gnl|CDD|367519	pfam03486, HI0933_like, HI0933-like protein.	0
NZ_CP011058.1|WP_045669438.1|961871_962756_-|LysR-family-transcriptional-regulator	gnl|CDD|223656	COG0583, LysR, Transcriptional regulator [Transcription].	8.75417e-51
NZ_CP011058.1|WP_045669434.1|958150_959260_-|Gfo/Idh/MocA-family-oxidoreductase	gnl|CDD|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	5.84444e-40
NZ_CP011058.1|WP_045669439.1|962886_963798_+|PhzF-family-phenazine-biosynthesis-protein	gnl|CDD|223461	COG0384, COG0384, Predicted epimerase, PhzC/PhzF homolog [General function prediction only].	3.10536e-87
NZ_CP011058.1|WP_045669441.1|965992_967516_-|A/G-specific-adenine-glycosylase	gnl|CDD|224115	COG1194, MutY, A/G-specific DNA glycosylase [DNA replication, recombination, and repair].	4.34529e-130
NZ_CP011058.1|WP_045669442.1|967949_968288_+|cytochrome-c	gnl|CDD|379187	pfam13442, Cytochrome_CBB3, Cytochrome C oxidase, cbb3-type, subunit III.	1.26761e-12
NZ_CP011058.1|WP_082084174.1|957119_957977_-|hypothetical-protein	gnl|CDD|227604	COG5279, CYK3, Uncharacterized protein involved in cytokinesis, contains TGc (transglutaminase/protease-like) domain [Cell division and chromosome partitioning].	7.30109e-24
NZ_CP011058.1|WP_045669443.1|968417_968828_-|holo-ACP-synthase	gnl|CDD|234610	PRK00070, acpS, 4'-phosphopantetheinyl transferase; Provisional.	4.45372e-48
NZ_CP011058.1|WP_045669433.1|955421_956588_+|virulence-factor	gnl|CDD|379361	pfam13769, Virulence_fact, Virulence factor. This domain is found in conserved virulence factors. It is often found in association with pfam02985 and pfam08712.	4.28048e-23
NZ_CP011058.1|WP_045669440.1|965331_966006_-|bifunctional-4-hydroxy-2-oxoglutarate-aldolase/2-dehydro-3-deoxy-phosphogluconate-aldolase	gnl|CDD|223871	COG0800, Eda, 2-keto-3-deoxy-6-phosphogluconate aldolase [Carbohydrate transport and metabolism].	2.98689e-68
NZ_CP011058.1|WP_045669431.1|951642_952407_-|acyltransferase	gnl|CDD|224748	COG1835, COG1835, Predicted acyltransferases [Lipid metabolism].	1.59208e-12
NZ_CP011058.1|WP_045669447.1|972369_973230_-|alpha/beta-hydrolase	gnl|CDD|378820	pfam12146, Hydrolase_4, Serine aminopeptidase, S33. This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. It is found in association with pfam00561. The majority of the members in this family carry the exopeptidase active-site residues of Ser-122, Asp-239 and His-269 as in UniProtKB:Q7ZWC2.	7.45235e-77
NZ_CP011058.1|WP_052702783.1|959517_960969_-|glycoside-hydrolase-family-32-protein	gnl|CDD|350134	cd18622, GH32_Inu-like, glycoside hydrolase family 32 protein such as Aspergillus ficuum endo-inulinase (Inu2). This subfamily of glycosyl hydrolase family GH32 includes endo-inulinase (inu2, EC 3.2.1.7), exo-inulinase (Inu1, EC 3.2.1.80), invertase (EC 3.2.1.26), and levan fructotransferase (LftA, EC 4.2.2.16), among others. These enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic nucleophile and a glutamate acts as the general acid/base; a conserved aspartate residue in the Arg-Asp-Pro (RDP) motif stabilizes the transition state. These enzymes are predicted to display a 5-fold beta-propeller fold as found for GH43 and CH68. The breakdown of sucrose is widely used as a carbon or energy source by bacteria, fungi, and plants. Invertase is used commercially in the confectionery industry, since fructose has a sweeter taste than sucrose and a lower tendency to crystallize. A common structural feature of all these enzymes is a 5-bladed beta-propeller domain, similar to GH43, that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.	8.42297e-139

Protein sequences

>NZ_CP011058.1|WP_045669439.1|962886_963798_+|PhzF-family-phenazine-biosynthesis-protein
MDSTGERQLYIVDAFTDTPFSGNAAGVVPEADGLGEKRMLQIAAELKQSETAFLALSNHPDADFRVRYFTPQEEIDFCGHATVAAAWVLGSEYGWAEKAERVVFETNIGLVPVDLLKEDDRLKLVTMTQVAPKLQEIDVTTEEIARLAGISPSDVDPRSPIKLGYTGNWHLLLPVKTREAIDVARPLLPELAAMNRRFRISTTHLFTFDTQDDNYDLYTRDFAPAVGIPEDPVTGAANGALAGYLLLEGIISADSRRLRIAQGHAIGRPGTLFVTVTPGERAPVIQVAGSAHISIKGTLNNAK
>NZ_CP011058.1|WP_045669438.1|961871_962756_-|LysR-family-transcriptional-regulator
MTITQFIVLIKVIDLGSFSKAAEALNMTQPAVSHAISSLEADLGVTLLIRDRRRGLMLSDVGKRILIHVRGILNLLEIIEQEVTAEKGLEAGTLRIGSFPSASARFLPQIIGEFRSEYPNVEIILLEGTYHEVEEWLNTRVIDIGIVLLPNKDMDIIPFTKDKMVAVLPSGHPLRNKPFIRIEELNNEPFIMPRGYEAPIVNLFKQAKTKLRMEFQVLNTVTIIKMIEQGLGLSILGELALPDGDLPEVQIRDLEPAVWRHLGLACPSFKEASPAVNLFVRLALDLFSNNDKTK
>NZ_CP011058.1|WP_045669436.1|961215_961431_+|substrate-binding-domain-containing-protein
MPTPLDCQVVGFDDIPGAGMIDSPLTTVRTYKYEIGERAAESVLARIAQPGRHQETIYLKTDVVFRGSARG
>NZ_CP011058.1|WP_052702783.1|959517_960969_-|glycoside-hydrolase-family-32-protein
MIAQTDYKELYRPQFHLTPPAGPMSDPNGMVFFEGEYHQFYQYSGQWGHAVSTDLVHWEHLPLALVRDELGDCWSGSAVVDWDDSSGLFGGSAGLVALFTHFKDGLQSLSLAYSADRGRTWIKYAGNPVIPNPGLKDFRDPKVLRHKESGKWVMVVSADQCVHFYSSDNLIDWTFESEFGEGQGSHVAVWECPDLFALPIDGNPDRLKWVLHVSLGDNAETDGSTAQYFIGEFDGRTFVNDLPAAEVRWTDYGQDFYAAVSYSDVPDEDGRRIWLGWTSNWKYPFEGPTEPWKGGMSIPRSLSLKTLQDGTIGLVQQPAQELQRLREGRREFQPAVVGDGALSLDFSGSSYELVTEIEWEDAEEFGIRLCVSDREATAVGYSPNNACLFLDRTRSGFSDIQSRSGGPAGFAKRFEAPYSTAERRVKLHVFVDVSIVEVFVDDGERVITSLIYPDAASGSLELYASGGSALFSNLNIYPLRSIW
>NZ_CP011058.1|WP_045669434.1|958150_959260_-|Gfo/Idh/MocA-family-oxidoreductase
MKLGFIGCGIISDAHLQGLISLKNEGKPAFDIAAVCDLDPDKAGRFAAKVSEETGVRPNVYTDYRKMLERENLAAVSILVTHDVHHTVAEDCFAAGVHVQMQKPLAISPSFGRKMIDDAAKYGKVLTLCEPSILGAGNVATAKAVQDGLIGSVYLVMDYATSPVRNGFFAGTPWRHMKGRAGAGWINDHGVHRTHSFLEVVGAVDEVFAYTKIFEKVRTDGSVTIEPTGEDVAVTVLRFAGGALGHWMCATAIHGEGTGGLHLYGSKGSLRPGQHALLDSGSRISHQELIEQYAGNVVQDPFAHSFQELWDAIADGTPPLSSSAKCLEALSVVFAALESAHTGQPVKVSEIVDGSRHAYEDTVIAEMSM
>NZ_CP011058.1|WP_082084174.1|957119_957977_-|hypothetical-protein
MLTALFLVTGVALNIRLETTVKADLETSANAGLTTNANAKVESADKAEQVVPAGIARLEREFARQFAGRSASFTSIFEGDPSRLNKSIASVIGRALHLDDYTAYIIDSYTYTVRSRGSLSSIQLQVRYRETQDQTAEVDREVKKALGQILQPDMNADEKVKFVHDWVVRRLAYDESLQRYTAYEALRYGKAVCQGYALLTYKMLSAAGIPVRIVEGKVASGDHAWNLVLLGGRWYHMDTTWDDPLPDRPGRVRYDYYLKTDEQMREDHSWTRPYPEAVTEYDGRH
>NZ_CP011058.1|WP_045669433.1|955421_956588_+|virulence-factor
MKLLSIEPTPSPNSMKLNVDETLARGRRISYTPADADSAPEPLRGLLEIAGVRGLFRTADFIALDRKPGADWAGILAKARELLQAADGQGASAGSGGPDAESGFGEAHVLVQMFRGIPMQVRVRTESGETRAALPKPFADAVGKAAGASMIRERMLEEFGVRYGEPEDIAAEIVRELEAAYPAERLDALAEASLALGGTDAPEGAPAPRPEPLDAARVLERFAAPDWQSRYAALERLEKADAAALPLLERALADENASIRRLAVVYLGDMRGPEALPLLFRALRDASASVRRTAGDTLSDIGDPAAVAPMIEALADRNKLVRWRAARFLYEAGDESAVPALETAAEDAEFEIRLQAQMALERIRSGEEAAGSVWQQMTAMRKGSAPAE
>NZ_CP011058.1|WP_082084173.1|953785_954673_-|MBL-fold-metallo-hydrolase
MNSSHWGGWVIEPEHGLAAYDPKKLALGEPSAAPTGIAGTAKAEAGERGAAANGPAGTPSTGGNAAADAPADPGAAAGNRAASATVGDAPADPGAAAGNHAASATAADAPADPGAAAGNRAASPAAAGGPAEAGGTPAASAGAASAAFGTGAAAAQAAASALKPRGLTELFAPGQRRPVVPKFPTVYFAGDSGYFRGFRDIGARFNIDVALMPIGAYDPESFMGVQHVTPEEALQAFRDIGADWFVPMHYGAFKLADDTPREALERLEAGRAEQGIEADRIVVLPHGETWRLSGQ
>NZ_CP011058.1|WP_045669432.1|952579_953647_-|Gfo/Idh/MocA-family-oxidoreductase
MTQAPIRIGVIGAGGIGNVHIETFKQIPEAEVRAVTDAYLPLAEKRAEEHEIPVVHNSPEAMLADSEIDAVVIGVPNQFHAPLAVEALKSGKHVLLEKPMAIDSANARAILDAKMASGKTLMMAHQMRWNPIIRGIKEYIDNGSVGRIYNAKAGWCRKKGIPGWGSWFTRKDQAGGGPLIDLGVHMLDVSLYLMGSPRPVSVYGTTYAEFGPQRQGIGSWGTPNWDGYYDVEDLATAMIKMDNGATLTLDVSWAAHSTGIGEDPFLHLMGTEGGVSMLGSTGKFVTHDEEGVAETDIQPLEGESDRVLLSRHFLECVRTGREPITSGMSGYTNNRILDAIYESSRIGGEVKLIWN
>NZ_CP011058.1|WP_045669431.1|951642_952407_-|acyltransferase
MKLNTKILDGFRFLLALWVAAGHFYILIGGTKFFNIPIISYLLGHPIIAVNGFMVITGFLMTYHYILRESKEPFREVSTGIKFVLRRLFRLYPVYFLAIMAAFFLVEYMYRFRAETLEFFTGSTLTAFGAESKMETPTLLGLFSHLLFVHGLIPHQDSSILSVAWSLSLEMQFYVLFPVIFAFLFTKKTHLKFIVLTILSTLISVLTLSFYKQYFDMPAALIFRMPIFLLGMMLAAAGLGKLKWRYVLLNGAVI
>NZ_CP011058.1|WP_045669440.1|965331_966006_-|bifunctional-4-hydroxy-2-oxoglutarate-aldolase/2-dehydro-3-deoxy-phosphogluconate-aldolase
MKRTNGRGEWPVSLLNVLLEEKIVAIFRGIEDRHADRAARALADGGIRLMEVTMNTDGALGIIARWRSLFGSEAYIGAGTVLDLKQAKEAEAAGAQFLISPNLDEEVVAYGASRGLSVWPGVMTPTEIVRAWKAGAEAVKIFPMTSLGLAYLSELKAPLNHIPMMATGGVTLDNIADYFKSGAAAVGMGSKLVNLDWVREGRFDLVEERARAFVSVVKAYVHAN
>NZ_CP011058.1|WP_045669441.1|965992_967516_-|A/G-specific-adenine-glycosylase
MIHNEQYPQPDEAKAVFSRELLAWYQAGNRNLPWRKSRDPYRVWVSEIMLQQTRVDTVIPYYLKFMDRFPTVKALAEAPEEDVLKRWEGLGYYSRARNLQAGARQVMELYGGVVPDDTEAVAGLKGVGPYTKGAIMSIAFNRPEPAVDGNVMRVLSRYFCLEDDIAKPSTRTGIEKLAVSLIPEGAAGDFNQALMELGALVCTPKSPGCLTCPVMSHCAGRIAGKENELPVKTKAKPPKPQIRLGALIAGTGEHAGKVLVRQRPDSGLLARMWELPHVLLEEDGAAADKPRGRRAKTPAAPGVRASHGRRAGSQAEPDLEERAADARELRRLMSAETGLIVSARSWLAVHEHTFSHLHWTVKVYLAELGESGRIWSVPLAAAESAAAYSAAPGRGGGENGGKPGSIDRGGDSGSDISISELSISAGNEAGGGKPRLGSIGGEFAVGETRGASAVGESGGASEGLAPTAGAADKLPPGYRWIGPEQMRELAFPNLFAKILNDYWDEAD
>NZ_CP011058.1|WP_045669442.1|967949_968288_+|cytochrome-c
MKSLPGVIAACSATLLITSCGGTSSPSGTSSGMPDGPKETVGLYMANCISCHGTDLQGRMGPETDIHAIGGKWSKEQIAAQIANGGGLMPAFKERLTEEQIGALADWLAAHK
>NZ_CP011058.1|WP_045669443.1|968417_968828_-|holo-ACP-synthase
MIIGIGHDLCDVSRVAKLLAGSSGDKFMARVLSGGEPVLAHSLGDARRAEFVAGRFAAKEAVAKALGCGIGASVGFTDIEIGRDERGKPQCRLSDKAWERLGYDGSVRPLMHITITHEKGLASAFAVAELPGGSPS
>NZ_CP011058.1|WP_045669444.1|968834_969644_-|ammonia-dependent-NAD(+)-synthetase
MTLQQEIIARLGVKPVIDVDEEIRKRVDFLKKYVLEAGTTGLLIAISGGIDSAVATGLCKLATDELTKETGRDYMTLGVFQPYGEQVDISHSYEVAEAFKLEHKVETNIQEAVDEIALEVEHAMKAIGVSRHISRGAKGNIKARTRMVKQYALAFELNLLVVGTDHASEAITGFFTKWGDGAVDITPLTSLNKRQVRQIAARLGVPQSVLDKAPTAGLWEGQTDETELGITYEDNSSYLEGKEVAPEVRELLEKQYLKTEHKRAAIPGI
>NZ_CP011058.1|WP_045669445.1|969662_970097_-|BrxA/BrxB-family-bacilliredoxin
MSMSFERYMLDMVQPMRDELTTLGIQELRTPEEVEEKLPAAKGTALVVVNSVCGCAAGQCRPGVAAALQHDVTPDHLFTVFAGQDKEATAKAREYFAPYPPSSPSIALMKDGELVHFIERHSIENRSAQEIAAELTSAFDRFCR
>NZ_CP011058.1|WP_158453646.1|970308_970449_-|hypothetical-protein
MNDMTNKQQKGTAPRNKDNSDIPGKGKSPESVGFDKKLDGPNRPAT
>NZ_CP011058.1|WP_045669446.1|970559_972245_-|PAS-domain-containing-protein
MWKEILLQAFISIMPVFAFQLWANRFGLRKGPLFFGLSFGLSLVLCFVLAVRLPNGLDFNMHYFPYIVGSLYGGYPVLFILSAIFIVMRIPMLDDVWETLDFIAYLAIFVPLIMLSIRPFQLARRKDKTKIAFALYGCIIVFLFISLIFYLIHFDQQLLPMLLLSAGVMALVAAMILFSLHTIESVKENYQLQTQLKRMSANYRNEVYKLQQFIDETALGVVIVDSDGFITHLNEMVLKLAGRSPYGKSKLEYMGRPFRDLFNTKETLCFSRRLEHAMVGSSTSELVEIGEKKLLQNVFAIRDAQSSYILGAAVLIYDITEISWLRDEIGKMERLSLVGQMAASITHEIRNPMAVIRGFVQLMRERSPESQQEYFRIVMDELDRANAIINDFLSLAQNRIIAKESCSLHVIMNELMPLLWADANLRGQSIELDLADDIPMLEMNDKEIKQLILNLARNGMEAMGDKGVLHLRTVNLGNGLQLRVEDEGIGISKEKMDRLFEPFFTTKTRGTGLGLPLCLSIAERHNGRIEVQSEEGKGTAFIVTFMKNGGAVPLAAAVRRA
>NZ_CP011058.1|WP_045669447.1|972369_973230_-|alpha/beta-hydrolase
MRHYEWELPAAGGMLLYARTWQPDSVSPEAAVCLVHGMGEHTGRYERVAQRLTDAGFAVLAYDQRGHGRSPGARGHAPSIDALAADAAAFIEAAGERHPGLPRILYGHSMGGSVALNTALRLQPAMSGLVLSSPWLRLAMNPPAVKLWLGRAVARIWPQFAQATGIQAADLFRPEHSPERYTPEHSPDPLSHKRITAGMFTALESAGEWALANSGLLRAPLLLMHGTADRITSYRASEELASGLGAAAEFRAFDGCYHELHNDLRREEVMNVLTDWIKARVAASRR
>NZ_CP011058.1|WP_045669448.1|973610_974891_+|NAD(P)/FAD-dependent-oxidoreductase
MSYDVIIVGGGSAGLMAAIAASESGAKTLLLDKGDRLGRKLGISGGGRCNVTNNKERDELIRHIPGNGRFLYSALSVFGNKDIIAFFERLGIRLKEEDNGRMFPVSDKAKTVVDALVGQVRRQGVAVRVNSPVAEVLYEGGRTVGVKLRSGETIRGESVVIASGGKSVPHTGSTGDGYEWAEKAGHTITELYPTEVPITSNEPFIVSKELQGLSLRNIGLSVWNAKGKRVVTHEGDMLFTHFGISGPAALRCSQFVVKGLKQSGGGNVLLTIDLLPGKSAEEVYRETMSLAMSEARKSIRNVLKSYLPDKLIPVLLSKAGLAESLTADNIPKQPWLELAKLIKAFPIRAYGTLSLSEAFVTGGGVNLKEIDPGTMASKLKEGLYFCGEILDIHGYTGGYNITAAFSTGYAAGSSAAAFAVNAADLR

Crispr_ID: NZ_CP011058_5

• CRISPR_ID: NZ_CP011058_5
• CRISPR_location: 1593324-1593439
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP011058_5

Consensus_repeat	Method
AAAGTGCGGTGAAACAGGCCGCTGCGCGGCTGACTCGT	CRISPRCasFinder

spacers of NZ_CP011058_5

>5.1|1593362|40|NZ_CP011058|CRISPRCasFinder
GCTTCCGATCGCTGCCGTTCCCATGGTGCCGATAGTTCGG

CRISPR arrays and Neighbor proteins around NZ_CP011058_5

CRISPR arrays

The CRISPR arrays of NZ_CP011058_5

>merge|NZ_CP011058|5|1593324-1593439|CRISPRCasFinder
AAAGTGCGGTGAAACAGGCCGCTGCGCGGCTGACTCGTGCTTCCGATCGCTGCCGTTCCCATGGTGCCGATAGTTCGGAAAGTGCGGTGAAACAAGCCGCTGCGCGGCTGACTCGT

>NZ_CP011058|5|4|1593324-1593439|CRISPRCasFinder
AAAGTGCGGTGAAACAGGCCGCTGCGCGGCTGACTCGT	GCTTCCGATCGCTGCCGTTCCCATGGTGCCGATAGTTCGG
AAAGTGCGGTGAAACAAGCCGCTGCGCGGCTGACTCGT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011058.1|WP_045669842.1|1603877_1604621_-|IclR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|224332
NZ_CP011058.1|WP_045669839.1|1599239_1600244_-|ABC-transporter-permease	unknown	unknown	gnl|CDD|223674
NZ_CP011058.1|WP_045669833.1|1590795_1592031_-|PucR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|225306
NZ_CP011058.1|WP_045669832.1|1589548_1590685_-|alanine-dehydrogenase	unknown	unknown	gnl|CDD|240630
NZ_CP011058.1|WP_082083654.1|1601971_1602655_-|M15-family-metallopeptidase	unknown	unknown	gnl|CDD|350618
NZ_CP011058.1|WP_045669838.1|1598350_1599226_-|ABC-transporter-permease-subunit	unknown	unknown	gnl|CDD|182131
NZ_CP011058.1|WP_052702835.1|1578363_1579485_-|amidase-domain-containing-protein	unknown	unknown	gnl|CDD|378910
NZ_CP011058.1|WP_052702836.1|1582739_1583693_-|nucleoside-hydrolase	unknown	unknown	gnl|CDD|239116
NZ_CP011058.1|WP_045669830.1|1587328_1588384_-|BMP-family-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|380619
NZ_CP011058.1|WP_045669840.1|1600264_1601872_-|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|173877
NZ_CP011058.1|WP_045673071.1|1594268_1595729_-|D-serine-ammonia-lyase	unknown	unknown	gnl|CDD|235096
NZ_CP011058.1|WP_045669831.1|1588749_1589091_-|DUF2294-family-protein	unknown	unknown	gnl|CDD|378372
NZ_CP011058.1|WP_045669829.1|1585760_1587302_-|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|226364
NZ_CP011058.1|WP_045669827.1|1579934_1582649_+|aconitate-hydratase-AcnA	unknown	unknown	gnl|CDD|236445
NZ_CP011058.1|WP_045669837.1|1597380_1598337_-|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|223521
NZ_CP011058.1|WP_045669836.1|1596421_1597372_-|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224048
NZ_CP011058.1|WP_045669828.1|1584696_1585764_-|ABC-transporter-permease	unknown	unknown	gnl|CDD|226962
NZ_CP011058.1|WP_045669841.1|1603628_1603862_-|cysteine-rich-CWC-family-protein	unknown	unknown	gnl|CDD|379586
NZ_CP011058.1|WP_052702837.1|1583765_1584707_-|ABC-transporter-permease	unknown	unknown	gnl|CDD|224005
NZ_CP011058.1|WP_045669835.1|1595898_1596429_-|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl|CDD|380339

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP011058.1|WP_045669842.1|1603877_1604621_-|IclR-family-transcriptional-regulator	gnl|CDD|224332	COG1414, IclR, Transcriptional regulator [Transcription].	1.07469e-64
NZ_CP011058.1|WP_045669839.1|1599239_1600244_-|ABC-transporter-permease	gnl|CDD|223674	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	2.35233e-124
NZ_CP011058.1|WP_045669833.1|1590795_1592031_-|PucR-family-transcriptional-regulator	gnl|CDD|225306	COG2508, COG2508, Regulator of polyketide synthase expression [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism].	5.132e-37
NZ_CP011058.1|WP_045669832.1|1589548_1590685_-|alanine-dehydrogenase	gnl|CDD|240630	cd05305, L-AlaDH, Alanine dehydrogenase NAD-binding and catalytic domains. Alanine dehydrogenase (L-AlaDH) catalyzes the NAD-dependent conversion of pyruvate to L-alanine via reductive amination. Like formate dehydrogenase and related enzymes, L-AlaDH is comprised of 2 domains connected by a long alpha helical stretch, each resembling a Rossmann fold NAD-binding domain. The NAD-binding domain is inserted within the linear sequence of the more divergent catalytic domain. Ligand binding and active site residues are found in the cleft between the subdomains. L-AlaDH is typically hexameric and is critical in carbon and nitrogen metabolism in micro-organisms.	0
NZ_CP011058.1|WP_082083654.1|1601971_1602655_-|M15-family-metallopeptidase	gnl|CDD|350618	cd14843, D-Ala-D-Ala_dipeptidase_like, D-Ala-D-Ala dipeptidase, includes uncharacterized enzymes. This subfamily of D-Ala-D-Ala dipeptidase (also known as D-alanyl-D-alanine dipeptidase vanX; VanX; EC 3.4.13.22) also includes several uncharacterized proteins. This is a Zn2+-dependent enzyme that mediates resistance to the antibiotic vancomycin in Enterococci and other bacteria (both Gram-positive and Gram-negative). It is part of a gene cluster that affects cell-wall biosynthesis. The operon triggers the termination of peptidoglycan precursors by D-Ala-(R)-lactate instead of D-Ala-D-Ala dipeptides. The enzyme is stereospecific, as L-Ala-L-Ala, D-Ala-L-Ala and L-Ala-D-Ala are not substrates. It belongs in the MEROPS peptidase family M15, subfamily D.	1.09741e-60
NZ_CP011058.1|WP_045669838.1|1598350_1599226_-|ABC-transporter-permease-subunit	gnl|CDD|182131	PRK09881, PRK09881, D,D-dipeptide ABC transporter permease.	1.9606e-123
NZ_CP011058.1|WP_052702835.1|1578363_1579485_-|amidase-domain-containing-protein	gnl|CDD|378910	pfam12671, Amidase_6, Putative amidase domain.	2.74994e-42
NZ_CP011058.1|WP_052702836.1|1582739_1583693_-|nucleoside-hydrolase	gnl|CDD|239116	cd02650, nuc_hydro_CaPnhB, NH_hydro_CaPnhB: A subgroup of nucleoside hydrolases similar to Corynebacterium ammoniagenes Purine/pyrimidine nucleoside hydrolase (pnhB). Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides generating ribose and the respective base. These enzymes vary in their substrate specificity. .	1.56155e-100
NZ_CP011058.1|WP_045669830.1|1587328_1588384_-|BMP-family-ABC-transporter-substrate-binding-protein	gnl|CDD|380619	cd19964, PBP1_BMP-like, periplasmic binding component of a basic membrane lipoprotein (BMP) from Aeropyrum pernix K1 and its close homologs in other bacteria. Periplasmic binding component of a family of basic membrane lipoproteins from Aeropyrum pernix K1 and various putative lipoproteins from other bacteria. These outer membrane proteins include Med, a cell-surface localized protein regulating the competence transcription factor gene comK in Bacillus subtilis, and PnrA, a periplasmic purine nucleoside binding protein of an ATP-binding cassette (ABC) transport system in Treponema pallidum. All contain the type 1 periplasmic sugar-binding protein-like fold.	2.27912e-97
NZ_CP011058.1|WP_045669840.1|1600264_1601872_-|ABC-transporter-substrate-binding-protein	gnl|CDD|173877	cd08512, PBP2_NikA_DppA_OppA_like_7, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold. This CD represents the substrate-binding domain of an uncharacterized ATP-binding cassette (ABC) type nickel/dipeptide/oligopeptide-like transporter. The oligopeptide-binding protein OppA and the dipeptide-binding protein DppA show significant sequence similarity to NikA, the initial nickel receptor. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	0
NZ_CP011058.1|WP_045673071.1|1594268_1595729_-|D-serine-ammonia-lyase	gnl|CDD|235096	PRK02991, PRK02991, D-serine dehydratase; Provisional.	0
NZ_CP011058.1|WP_045669831.1|1588749_1589091_-|DUF2294-family-protein	gnl|CDD|378372	pfam10057, DUF2294, Uncharacterized conserved protein (DUF2294). Members of this family of hypothetical bacterial proteins have no known function.	0.000687362
NZ_CP011058.1|WP_045669829.1|1585760_1587302_-|ABC-transporter-ATP-binding-protein	gnl|CDD|226364	COG3845, COG3845, ABC-type uncharacterized transport systems, ATPase components [General function prediction only].	0
NZ_CP011058.1|WP_045669827.1|1579934_1582649_+|aconitate-hydratase-AcnA	gnl|CDD|236445	PRK09277, PRK09277, aconitate hydratase AcnA.	0
NZ_CP011058.1|WP_045669837.1|1597380_1598337_-|ABC-transporter-ATP-binding-protein	gnl|CDD|223521	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	2.05569e-164
NZ_CP011058.1|WP_045669836.1|1596421_1597372_-|ABC-transporter-ATP-binding-protein	gnl|CDD|224048	COG1123, COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only].	3.70601e-116
NZ_CP011058.1|WP_045669828.1|1584696_1585764_-|ABC-transporter-permease	gnl|CDD|226962	COG4603, COG4603, ABC-type uncharacterized transport system, permease component [General function prediction only].	6.64559e-97
NZ_CP011058.1|WP_045669841.1|1603628_1603862_-|cysteine-rich-CWC-family-protein	gnl|CDD|379586	pfam14375, Cys_rich_CWC, Cysteine-rich CWC. This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and archaea. Proteins in this family are typically between 74 and 102 amino acids in length. It contains eight conserved cysteines, including a conserved CWC sequence motif.	6.79811e-10
NZ_CP011058.1|WP_052702837.1|1583765_1584707_-|ABC-transporter-permease	gnl|CDD|224005	COG1079, COG1079, Uncharacterized ABC-type transport system, permease component [General function prediction only].	1.46605e-77
NZ_CP011058.1|WP_045669835.1|1595898_1596429_-|helix-turn-helix-transcriptional-regulator	gnl|CDD|380339	cd02209, cupin_XRE_C, XRE (Xenobiotic Response Element) family transcriptional regulators, C-terminal cupin domain. This family contains transcriptional regulators containing an N-terminal XRE (Xenobiotic Response Element) family helix-turn-helix (HTH) DNA-binding domain and a C-terminal cupin domain. Included in this family is Escherichia coli transcription factor SutR (YdcN) that plays a regulatory role in sulfur utilization; it regulates a set of genes involved in the generation of sulfate and its reduction, the synthesis of cysteine, the synthesis of enzymes containing Fe-S as cofactors, and the modification of tRNA with use of sulfur-containing substrates. This family belongs to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold capable of homodimerization.	4.31682e-30

Protein sequences

>NZ_CP011058.1|WP_045669833.1|1590795_1592031_-|PucR-family-transcriptional-regulator
MAVEQNPFEGSFDSIEALAEAINDVLGCPVTIEDVNHRLIAYSSHDPHMDTARIATIVGRRVPEKVIGGLWRDGVIQRLAESDDPVRVPAIREIGLNDRVAVAIRKNTELLGYIWVVEDENHLDEQQLQQLKKAAQAARAKLIQHHQQRRKEEEGHKDFFWQLLMGHLQSETAIEEKAAKLGVALPSSFHILILQFASEISDKTVCQIRNLAAAAQHLKPVFHAIDRNQFILLSTPRFRHSSMRDFTNALAGFLRQMNDQFGSALLHGGSGSLYEDYTKVEKSYQEALTVLRIKTQFPGETSRLHYYPDLGYYRFLPLILEEKEKRGYRNICLEKLREYDREHNGDLLRTLEVFLGCDSNSKLAADALHVHTNTMNYRLKRISEIGDIDLTDMDQKVTLYLDLKTERLGRS
>NZ_CP011058.1|WP_045669832.1|1589548_1590685_-|alanine-dehydrogenase
MKIAIPKEIKNNENRVAITPSGVMALVKAGHEVLIEKGAGAGSGFADEDYAAAGARIASDAAEAWSFAEMVMKVKEPLPSEYGFFRENLILFTYLHLAAAPELARVLAEKGVIAIAYETVEANRSLPLLTPMSEVAGRMSAQIGAQFLEKNNGGIGILLGGVPGVARGKVTIIGGGVVGTNAAKIATGLGADVTVIDLSPERLRQLDDIFGSSIQTLISNPFNIAEAVAESDLVIGAVLIPGAKAPKLVTEDMIKTMKPGSVIIDVAVDQGGIFETVDRITTHDEPTYSKHGVVHYAVANMPGAVPRTSTIALTNVTIPYALQIAGKGVKQAIAESAALRLGVNVAGGSITYEALAKDLSVSYVPVEQALDKQFSAQR
>NZ_CP011058.1|WP_045669831.1|1588749_1589091_-|DUF2294-family-protein
MDQSFKKKLSILYNEINKEMFNVGVQSQKIYTIENQALIYAKINRLPVFNMLGEERKELLLSLESAVASSFKNLLKERIEATFNMPVTAVFKDYDPGTGYICTVISFDKTLTK
>NZ_CP011058.1|WP_045669830.1|1587328_1588384_-|BMP-family-ABC-transporter-substrate-binding-protein
MKKQHLVKLSMMLLVILFIAAGCGSNKSGQSGSSQTDIGGSEAPLSVGLYINGNLGDQGFFDSANAGVQRMDKEFGAKIKVVEGGSNQTDWAVGLESMVSSGKYDIVIAGTSQMSDITINLAKRYPNQKFIFFDVAIEGLPNVYSVIYDQKEGSFLAGAFAALVTKSTELKGSNPDKTIGFIGGMDIPIINEFRSGYEQGAQYIDRDIKVISSFVGSFSDAPKGKELGLAQFKQQKVDVIFAAAGAGGLGMFEAAKELGTYAIGCNVNQNEVQPGTVLTSMLKNVSDSLFRAVDRYKKGELQFGVSEQLGFAEGGVGLAKDDLYSKNVPQTIRDQVEEIQKKLESGEITLK
>NZ_CP011058.1|WP_045669829.1|1585760_1587302_-|ABC-transporter-ATP-binding-protein
MSDLLEMRNIHKVYSNGTRANRGVSFSVRHGEIHALVGENGAGKSTLMKILFGLETPSEGEIFYKGEKIEMRTPKDAIRYEIGMVHQHFMLVPSFTVAQNIVLGSEPRKGALSDHKAALLETDRLIREYGLKVDSSATVARLSVGLKQRVEILKVLYRGARLIILDEPTAVLTPQETDELFHSLRKLVDTGYTIIFITHKLNEVMSISDRITVLRAGQTVTTLNTAKTNKEEISRLMVGREVLLRVQKTPARAKETVLRINGLSDEDSYSGQPVLRNVSLEVKSGEILGIAGVEGNGQTELIEAITGFGKGYRGSILFQDKPLAGESIRAIRAMGIGHIPEDRQTRGACLTASVKENLILDQYREKAFGRIWFLNERQIRRHARELIERFDIRTESEDTPAGSLSGGNIQKIVVARELHKKPKLLIAAQPTRGVDIGSIEFIHKEIVRARDEGAAVLLVSAELTEIMSLSDRIGVLYNGELTALLNNTDDLTEEEIGYYMLGVKKDERKAVAT
>NZ_CP011058.1|WP_045669828.1|1584696_1585764_-|ABC-transporter-permease
MRPRKAVFLDLFGLAGAVAASLVIGIIVIFCVSSEPLAAMNAFFVEPLTNAFNFGSILNRMVPLVFTGLAIAVVFQSGVFSMGAEGQLYIGALTGAVAAVYMKGLSAWMHIPLVLVCAILGGGLFAFLPGILKARFKADEIVSTLMFNYIGIFFVSYLLNNVIKDANSGGFARTPYVQDSARLHQIVQGFPTLYSFVFALAAAAVVYILLFKTRTGYELRLVGKNPLFAEYGGIHIRKAIVLSMVISGALAGLGGAMEVIGQQGALNDHFSTGLGFDGIIISLLARNHPIGILVSAFFYAYLTVGGQNMQAGSDVPRDLAVIIQSLLVLFVSSQALFAYLNSRKAVRKGGAEVAS
>NZ_CP011058.1|WP_052702837.1|1583765_1584707_-|ABC-transporter-permease
MLHSIWEQIVNLSFFAVLLRLLPPILLGALGGLLTDRGGVINIGIEGLMLVSAFTSISVGSASGSWVAGVLAGMLASVLVSLLMAFFTLQMKVDVIVAGFAVNIFGGAATVLLMSILYHSHGQYMPADPVRIPNVVIPFIEDIPVLGQLLSGHNVMVWLSFLAVLFCYVLLNHTPYGFHLRAVGEEPSAARSLGIDVQRIQYSALIWGGVFSGLAGAYLSTGMTSMFVREMTAGTGFLALAVVIFGNKNPVGILFGSLLFALAQTLVNTVETTPDNKVPSQLIAMIPYIVTVAVLSVYAVRKASTRRRKAAAV
>NZ_CP011058.1|WP_052702836.1|1582739_1583693_-|nucleoside-hydrolase
MQKMNPILLDVDTGIDDSVAILYALNALNIRVEGICTGFGNTDVGQATDNTLRLIKLANPDYDIPVAPGAAGPLQRRWSGPVVHVHGNNGIGNAELPASSQQPLQQSAADFIVRKANEQPGEITLVTLGRLTNLALALEKDPSIGTKIKKVVMMGGTVAAPGNVTPVCEANFHGDPEAAARVLKSDLPLTIVGLDVTMKTRLTARHLELLARNAGPDKRELIAYLQTALSYYFNYYTQVNDFIGACPLHDPLALLVAVDPSLVKMQTLKADIECEGRFTAGMVVTDQRTHPSIGRDVQVCLEVDSERAVNKLVAAFL
>NZ_CP011058.1|WP_045669827.1|1579934_1582649_+|aconitate-hydratase-AcnA
MSKQNHFSVRSSLESGGKTYAYYRLQGLEEQGLGPVSKLPFSIKVLLEAAVRQFDGRAITPEHVKQLATWSEGREDKEIPFIPARIVLQDFTGVPVVVDLAAMRDTVKKAGGDPKQINPLVPVDLVIDHSVMVDAFGTPDALATNMDLEFERNGERYRFLRWAQTAFDNFRAVPPATGIVHQVNLEYLASVAATKTVDGETVVYPDSLVGTDSHTTMINGLGVVGWGVGGIEAEAGMLGQPLYFVMPEVIGFKLTGQLAEGATATDLALTVTQILRKKGVVGKFVEFFGPGLSNISLEDRATVANMAPEYGATIGFFPVDGETIRFLRATGRTEEQIALVESYYKEQGMFRTDETPDPVFTDLVELDLSTIVPSLAGPKRPQDRVELTNMKEEFNSIIRTPIEKGGYGLSDEKIGQVVDIQHKNGKTSQMGTGAVVIAAITSCTNTSNPSVMLGAGLVAKKAVERGLVKPEYVKSSLTPGSLVVTEYLKKADLLAPLEKLGFYVAGYGCATCIGNSGPLPDEVSQAIADNDMTVAAVLSGNRNFEGRVHAQVKANYLASPPLVVAYALAGTVNIDLASDPIGYDPQGAPVYLKDIWPTSQEIRDAVGTAVSPEMFREKYANVFTQNEQWNEIPVPQGELYEWDEKSTYIANPPFFENLGSEVGDITDIKAANVLALLGDSVTTDHISPAGNIKADSPAGKFLIEHGVDKKDFNSYGSRRGHHEVMMRGTFANIRIRNQVAPGTEGGVTTYLPTDEVMSIYDASMKYQDKDNNLVVIAGKEYGTGSSRDWAAKGTFLLGVKAVIAESFERIHRSNLVGMGVLPLQFQQGQGWSTLGINGREKFDIVGLSNDVTPGQTVHVTATREDGSSFEFPVVVRLDSMVDVDYYRNGGILQTVLRQMIAGGK
>NZ_CP011058.1|WP_052702835.1|1578363_1579485_-|amidase-domain-containing-protein
MPRTVNRGVKRKVKRSQPQSSERRAAPEPEGWKAAVHSYVNCFNQAEIDRRLTVFDGLLADDDHRWRMEERLKRLHSRELARGILAPQSEIKASLVRVHESSSEVSVLIALHIKRTVEHRGRIYTEERLEQERLWLVKENERWRIVRVEPTVGERRPKYGTEAASGALAEHRSFGGGREAARSESRPLPFLNHALLPRLNERERAVTYRRDLVAAYADQWWKLPNPSYEPFEVNCTNYVSQCIFAGSAPMNYTGKRESGWWYKGRSGGAELWSYSWAVSNALQVYLSFPRSRGFRAQSVDSAQELQLGDVIMYDWSGDGRYQHTTIVTAFDADGMPLVNANTVPSRHRYWDYRDSYAWTERTRYRFYHIADTF
>NZ_CP011058.1|WP_045673071.1|1594268_1595729_-|D-serine-ammonia-lyase
MRTLTEQFPLVSELIAAKELFWANPGYEPFERGSANVSLSQEDVTEAEDRLRRFAPYLAQVFPELKENGGIIESPLVEIASMKAYMERQYLERQYMEQQSMDQHFDPKLAGRLLLKCDSHLPVSGSIKARGGIYEVLKHAEELAIRHGLQTRGESAPSQLPARGAASHDGGQSHDDYSALEGGQPHADYTALDSEKFRDFFSQYSVAVGSTGNLGLSIGIMSARIGFKATVHMSADAKQWKKDLLRSKGVTVVEYVSDYSKAVEEGRKQAAQDPKCYFIDDENSVDLFLGYATAASRLSKQLEEMNIRVDAEHPLFVYLPCGVGGGPGGVAFGLKLLFQDHVHCFFAEPTHSPCMLLGMMTGLHDGISVQDIGMDNVTAADGLAVGRPSGFVGRMMEPLLSGCYTVDDSTLYRLLQAMAATENIRLEPSALAGALGPVQLLSTASGQEYIRRHQLQDRMSRAAHIVWATGGSMVPKEIMEEYLSKK
>NZ_CP011058.1|WP_045669835.1|1595898_1596429_-|helix-turn-helix-transcriptional-regulator
MFNGERVREMRKQRDYTLQELAEKTGLSIGLLSQIERGIVDPTVGTFWKICTALNVPIHHFFQGIEEEHIVVRKDRRRLMELSDSNVRYHILSPNRPGKIEYLLVEIEPGDMIEKDLISHSGEECGFVIQGEMKIILDQQEIVLNEGDSICFPSTTPHRYVNIGSGVAVSIWAMVP
>NZ_CP011058.1|WP_045669836.1|1596421_1597372_-|ABC-transporter-ATP-binding-protein
MNDLIQMRQVGKRFGKGKQLVHAVQEMTMSIRQGEAFGLVGESGSGKSTIGKMLIGLEMPTEGSITYLGESLWNKGKFHSPRPGQIQIVFQDPQSSLDPRMTVKDIILEPLHALPAAERKDKGAEAKLHALIKRVGLKEEHLYRYPHEFSGGQRQRIAIARALITDPSFIVLDEPTSALDVSVQAQVLNLLKELKKERNLTYLFISHNMSVIRYMCDRIAVLYKGKLVEVGPAGELFRQPDHPYTRILLSSLPSVYEETTQGIGFAEPAADGGSGACVFYQKCPLRQNICLKAPLFAEKEQDWGCACHLLEVNANV
>NZ_CP011058.1|WP_045669837.1|1597380_1598337_-|ABC-transporter-ATP-binding-protein
MLIDIKNLSVEFHGMRGTMKALQHVNLSIQKGEILGVVGESGSGKSVTALSILGLLEKNAEVTSGEIWYAGKNLLALSKKEIQAIRGKEIGMIFQEPMTALHPTMRVGKQLAEVMKRHRGVAGKEAKRLAVQALRDVQIHDPELVAEKYPFELSGGMRQRVVIALAMAAPPDLLIADESTTALDVTIQYEILKLMKELSVKRGTSILFITHDLGVVAELCSKVAIMYAGEVVETGSTLDVLRSPQHPYTQALLNALPDLADPNEPLQAIEGSVPDLRNRPIGCCFASRCPQAVQICSERKPELDQRTPGHRAACWVGR
>NZ_CP011058.1|WP_045669838.1|1598350_1599226_-|ABC-transporter-permease-subunit
MQVQINETVLPPAKEINPFWYKLKKNPMTIIGLAILAIMILLSLAAPLISAHDPNKINVIERFQGPSGNHWFGTDEVGRDIFTRILYGARLSLGIGIVIVVCAGLIGTVLGTIAGYFGGKVDQVIMRIMDMILAFPTLILAMAFAAALGPSLQNAMIAIAVVKIPVYVRLARGETLALREKLFVKAAVTFGIKPRRIIARHIIPNVVSPVIIQVTLDIGDAILMVATLGFLGLGAQPPAPEWGAMISTGWKYLLDYWWYPTFPGLALFLTSGALNLIGDGIRDILDPKSSR
>NZ_CP011058.1|WP_045669839.1|1599239_1600244_-|ABC-transporter-permease
MGQMIAKRLIMLFFVAFGVTLIIFFLSHIIPGDPARMLVGQRASEQTLQQVRHQLGLDQPVWVQYFTYVKGLFAGDLGISIRTQQPVAQDLFVFFPATIELALLAFLFALIVGIPLGVLSAVKKDTGWDHGARVFSIAGVSTPVFWSGLVMILVFYGYLGWFPSTGRLDMDIAPPARITGLYLLDSLLTGNWAAFKNSLWHLFIPAVTLSYAQLAIITRQVRASMLEVLGQEYIRTALANGISGPFLLLRYALRNALIPTITVVGLSFGSLLGGAVVTETIFAWPGMGKYVVDSISYLDFPAIMGFTLIISIGYALINLIVDLAYYVLDPQIKA
>NZ_CP011058.1|WP_045669840.1|1600264_1601872_-|ABC-transporter-substrate-binding-protein
MKSRVFELICILVLILALTACSGKSAQSGATNQAAPSTTDNTAGTTSGAKDSLVVAMTADEGTLDPAVTMDNAAWKITYPTYERLVEYDGATTEVKPGLAKDWKVSPDGKTWTFTLNEGHKFADGTAVDAEAVKFTFDRILKIAKGPVDVFGVIQEVKAPDAKTVVFTLKNNFPPFLSTLAANYGGIVSPKVKEHEVNGDLGQSYLAEHTMGSGAYQLTEWKKGEYLKLELNPNASVKPALKTVYYKIIADPSAQRLQLEKGDIDIAEGIPVEQLGGVSALPNVQIVQQPSLFVDIAYINSSKGNPALKDPKVRQAISYAVDYKAIADSVQQGYATQMRGPIPQGLWGHNDNAKQYSFDTAKAKSLLAEAGVSNLTLDLVYSDKWPWWETEALTLQSYLGEAGIKLNLKKVAYATQRDMIDKGDFDLCLGVWSPDFADPFMFMNYWFDSSNFGLSGNRAFYKNDQVDGLVRKAASVNDQAERETLYSQAQDIVIDEAPYVLLYQKDYLLPVSKAVKGFLYNPMLEGIYNVAEMSK
>NZ_CP011058.1|WP_082083654.1|1601971_1602655_-|M15-family-metallopeptidase
MDSNLQLSHNEHFYRSIPIQETGEPLVSLSDISPRIKVLPYYFHHNVPGALNDCYLRAGAAQRLALAAENLPDGCCFVVLDGWRPSEVQRALYETIRESFRRKGMNESEVARELAKFVAYPSDNVDMPSPHMTGGAVDLTIADPEGWLDMGTGFDEFTVKARTDWYERAALLTETELKIRTNRRLLKQVMANAGFENYDEEWWHYDYGNQRWAMLTGGQAIYKGVRK
>NZ_CP011058.1|WP_045669841.1|1603628_1603862_-|cysteine-rich-CWC-family-protein
MAANGTAADDAAMRCPLCGGGNACSVAQGGDGTNCWCVKANFPKEFFAQIPDDQRGRACFCAGCLQRFKERRGLEKP
>NZ_CP011058.1|WP_045669842.1|1603877_1604621_-|IclR-family-transcriptional-regulator
MQDGKLNVRAVERALDILLCFTSDSNLAMTEIAERTELHKSTVHRMLSTLEAKGFVERDRASDRYHLGMRVWELAANLSQSDDPAVIWLPEMERLRDALGETVSLYVRDGKERIRIQAVQSNQAVRRVAPVGVRLPLYVGASGKVLIAYADPLEQDMLMREADASGVIDPQRFREQLEEIRRIGYATSTEEREQGAAAVSAPIFNHAGKLAGALAVSGPAGRFTMDIMRQCAPQIMESALRMGTMLR

Crispr_ID: NZ_CP011058_6

• CRISPR_ID: NZ_CP011058_6
• CRISPR_location: 2419016-2419096
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP011058_6

Consensus_repeat	Method
CAAGAGCGATCGGAAGATCTAATGG	CRISPRCasFinder

spacers of NZ_CP011058_6

>6.1|2419041|31|NZ_CP011058|CRISPRCasFinder
CCTCGCGCAGCGCTCCTTTTTCCACTCTGCT

CRISPR arrays and Neighbor proteins around NZ_CP011058_6

CRISPR arrays

The CRISPR arrays of NZ_CP011058_6

>merge|NZ_CP011058|6|2419016-2419096|CRISPRCasFinder
CAAGAGCGATCGGAAGATCTAATGGCCTCGCGCAGCGCTCCTTTTTCCACTCTGCTCAAGAGCGATCGGAAGATCAAATGG

>NZ_CP011058|6|5|2419016-2419096|CRISPRCasFinder
CAAGAGCGATCGGAAGATCTAATGG	CCTCGCGCAGCGCTCCTTTTTCCACTCTGCT
CAAGAGCGATCGGAAGATCAAATGG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011058.1|WP_045670438.1|2431011_2432055_+|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl|CDD|223715
NZ_CP011058.1|WP_052702894.1|2409439_2409943_-|hypothetical-protein	unknown	unknown	gnl|CDD|226447
NZ_CP011058.1|WP_045670436.1|2428705_2429971_+|radical-SAM-protein	unknown	unknown	gnl|CDD|100105
NZ_CP011058.1|WP_045670426.1|2413520_2414393_+|agmatinase	unknown	unknown	gnl|CDD|212539
NZ_CP011058.1|WP_045670435.1|2424875_2426129_+|UDP-N-acetylglucosamine-1-carboxyvinyltransferase	unknown	unknown	gnl|CDD|183779
NZ_CP011058.1|WP_045670423.1|2407703_2409443_-|AarF/ABC1/UbiB-kinase-family-protein	unknown	unknown	gnl|CDD|223733
NZ_CP011058.1|WP_045670430.1|2417041_2418721_+|arginine--tRNA-ligase	unknown	unknown	gnl|CDD|234964
NZ_CP011058.1|WP_045670425.1|2412661_2413489_+|polyamine-aminopropyltransferase	unknown	unknown	gnl|CDD|234843
NZ_CP011058.1|WP_045670434.1|2423801_2424656_+|class-II-fructose-1,6-bisphosphate-aldolase	unknown	unknown	gnl|CDD|376459
NZ_CP011058.1|WP_045670439.1|2432152_2432839_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|213222
NZ_CP011058.1|WP_045673189.1|2415491_2415737_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP011058.1|WP_045670432.1|2421446_2423048_+|CTP-synthase	unknown	unknown	gnl|CDD|235437
NZ_CP011058.1|WP_045670431.1|2420558_2421119_+|DNA-directed-RNA-polymerase-subunit-delta	unknown	unknown	gnl|CDD|275360
NZ_CP011058.1|WP_045670427.1|2415793_2416315_+|DNA-deoxyinosine-glycosylase	unknown	unknown	gnl|CDD|381682
NZ_CP011058.1|WP_045670429.1|2416616_2417042_+|DUF1934-domain-containing-protein	unknown	unknown	gnl|CDD|378129
NZ_CP011058.1|WP_082083718.1|2419126_2420158_-|S8-family-peptidase	unknown	unknown	gnl|CDD|173803
NZ_CP011058.1|WP_045670424.1|2410167_2412288_-|penicillin-binding-protein-1A	unknown	unknown	gnl|CDD|273955
NZ_CP011058.1|WP_045670437.1|2430329_2431019_+|response-regulator-transcription-factor	unknown	unknown	gnl|CDD|223816
NZ_CP011058.1|WP_045673187.1|2406182_2406734_-|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|366181
NZ_CP011058.1|WP_045670433.1|2423268_2423667_+|response-regulator	unknown	unknown	gnl|CDD|381105

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP011058.1|WP_045670438.1|2431011_2432055_+|HAMP-domain-containing-histidine-kinase	gnl|CDD|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	1.43774e-45
NZ_CP011058.1|WP_052702894.1|2409439_2409943_-|hypothetical-protein	gnl|CDD|226447	COG3937, COG3937, Uncharacterized conserved protein [Function unknown].	1.1231e-12
NZ_CP011058.1|WP_045670426.1|2413520_2414393_+|agmatinase	gnl|CDD|212539	cd11593, Agmatinase-like_2, Agmatinase and related proteins. This family includes known and predicted bacterial and archaeal agmatinase (agmatine ureohydrolase; AUH; SpeB; EC=3.5.3.11), a binuclear manganese metalloenzyme that belongs to the ureohydrolase superfamily. It is a key enzyme in the synthesis of polyamine putrescine; it catalyzes hydrolysis of agmatine to yield urea and putrescine, the precursor for biosynthesis of higher polyamines, spermidine, and spermine. As compared to E. coli where two paths to putrescine exist, via decarboxylation of an amino acid, ornithine or arginine, a single path is found in Bacillus subtilis, where polyamine synthesis starts with agmatine; the speE and speB encode spermidine synthase and agmatinase, respectively. The level of agmatinase synthesis is very low, allowing strict control on the synthesis of putrescine and therefore, of all polyamines, consistent with polyamine levels in the cell. This subfamily belongs to the ureohydrolase superfamily, which includes arginase, agmatinase, proclavaminate amidinohydrolase, and formiminoglutamase.	2.8514e-127
NZ_CP011058.1|WP_045670435.1|2424875_2426129_+|UDP-N-acetylglucosamine-1-carboxyvinyltransferase	gnl|CDD|183779	PRK12830, PRK12830, UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Reviewed.	0
NZ_CP011058.1|WP_045670423.1|2407703_2409443_-|AarF/ABC1/UbiB-kinase-family-protein	gnl|CDD|223733	COG0661, AarF, Predicted unusual protein kinase [General function prediction only].	1.08288e-146
NZ_CP011058.1|WP_045670430.1|2417041_2418721_+|arginine--tRNA-ligase	gnl|CDD|234964	PRK01611, argS, arginyl-tRNA synthetase; Reviewed.	0
NZ_CP011058.1|WP_045670429.1|2416616_2417042_+|DUF1934-domain-containing-protein	gnl|CDD|378129	pfam09148, DUF1934, Domain of unknown function (DUF1934). Members of this family are found in a set of hypothetical bacterial proteins. Their precise function has not, as yet, been defined.	1.76636e-21
NZ_CP011058.1|WP_045670434.1|2423801_2424656_+|class-II-fructose-1,6-bisphosphate-aldolase	gnl|CDD|376459	pfam01116, F_bP_aldolase, Fructose-bisphosphate aldolase class-II.	9.09713e-141
NZ_CP011058.1|WP_045670439.1|2432152_2432839_+|ABC-transporter-ATP-binding-protein	gnl|CDD|213222	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.	9.86244e-107
NZ_CP011058.1|WP_045670436.1|2428705_2429971_+|radical-SAM-protein	gnl|CDD|100105	cd01335, Radical_SAM, Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and S-adenosylmethionine (SAM) in close proximity. They are characterized by a conserved CxxxCxxC motif, which coordinates the conserved iron-sulfur cluster. Mechanistically, they share the transfer of a single electron from the iron-sulfur cluster to SAM, which leads to its reductive cleavage to methionine and a 5'-deoxyadenosyl radical, which, in turn, abstracts a hydrogen from the appropriately positioned carbon atom. Depending on the enzyme, SAM is consumed during this process or it is restored and reused. Radical SAM enzymes catalyze steps in metabolism, DNA repair, the biosynthesis of vitamins and coenzymes, and the biosynthesis of many antibiotics. Examples are biotin synthase (BioB), lipoyl synthase (LipA), pyruvate formate-lyase (PFL), coproporphyrinogen oxidase (HemN), lysine 2,3-aminomutase (LAM), anaerobic ribonucleotide reductase (ARR), and MoaA, an enzyme of the biosynthesis of molybdopterin.	3.36266e-14
NZ_CP011058.1|WP_045670432.1|2421446_2423048_+|CTP-synthase	gnl|CDD|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_CP011058.1|WP_045670431.1|2420558_2421119_+|DNA-directed-RNA-polymerase-subunit-delta	gnl|CDD|275360	TIGR04567, DNA-directed_RNA_polymerase_subunit_delta, DNA-directed RNA polymerase delta subunit. Members of this family are the RNA polymerase delta subunit, as found in the Firmicutes and the Mollicutes. All members of the seed alignment have an extended C-terminal low-complexity region, consisting largely of Asp and Glu, that is not included in the model. Proteins giving borderline scores should be checked to confirm a similar acidic C-terminal domain. [Transcription, DNA-dependent RNA polymerase].	6.87102e-34
NZ_CP011058.1|WP_045670427.1|2415793_2416315_+|DNA-deoxyinosine-glycosylase	gnl|CDD|381682	cd10032, UDG-F6_HDG, Uracil DNA glycosylase family 6, includes hypoxanthine-DNA glycosylase and similar proteins. Uracil DNA glycosylase family 6 hypoxanthine-DNA glycosylase (HDG) lacks any detectable UDG activity; it excises hypoxanthine, a deamination product of adenine, from double-stranded DNA. Uracil-DNA glycosylase (UDGs) initiates repair of uracils in DNA. Uracil in DNA can arise as a result of misincorporation of dUMP residues by DNA polymerase or via deamination of cytosine. Uracil in DNA mispaired with guanine is one of the major pro-mutagenic events, causing G:C->A:T mutations. Thus, UDG is an essential enzyme for maintaining the integrity of genetic information. UDGs have been classified into various families on the basis of their substrate specificity, conserved motifs, and structural similarities. Although these families demonstrate different substrate specificities, often the function of one enzyme can be complemented by the other.	1.75476e-57
NZ_CP011058.1|WP_045670425.1|2412661_2413489_+|polyamine-aminopropyltransferase	gnl|CDD|234843	PRK00811, PRK00811, polyamine aminopropyltransferase.	2.65097e-165
NZ_CP011058.1|WP_082083718.1|2419126_2420158_-|S8-family-peptidase	gnl|CDD|173803	cd07477, Peptidases_S8_Subtilisin_subset, Peptidase S8 family domain in Subtilisin proteins. This group is composed of many different subtilisins: Pro-TK-subtilisin, subtilisin Carlsberg, serine protease Pb92 subtilisin, and BPN subtilisins just to name a few. Pro-TK-subtilisin is a serine protease from the hyperthermophilic archaeon Thermococcus kodakaraensis and consists of a signal peptide, a propeptide, and a mature domain. TK-subtilisin is matured from pro-TK-subtilisin upon autoprocessing and degradation of the propeptide. Unlike other subtilisins though, the folding of the unprocessed form of pro-TK-subtilisin is induced by Ca2+ binding which is almost completed prior to autoprocessing. Ca2+ is required for activity unlike the bacterial subtilisins. The propeptide is not required for folding of the mature domain unlike the bacterial subtilases because of the stability produced from Ca2+ binding. Subtilisin Carlsberg is extremely similar in structure to subtilisin BPN'/Novo thought it has a 30% difference in amino acid sequence. The substrate binding regions are also similar and 2 possible Ca2+ binding sites have been identified recently. Subtilisin Carlsberg possesses the highest commercial importance as a proteolytic additive for detergents. Serine protease Pb92, the serine protease from the alkalophilic Bacillus strain PB92, also contains two calcium ions and the overall folding of the polypeptide chain closely resembles that of the subtilisins. Members of the peptidases S8 and S35 clan include endopeptidases, exopeptidases and also a tripeptidyl-peptidase. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The S53 family contains a catalytic triad Glu/Asp/Ser. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.	4.189e-100
NZ_CP011058.1|WP_045670424.1|2410167_2412288_-|penicillin-binding-protein-1A	gnl|CDD|273955	TIGR02074, Includes:_Penicillin-insensitive_transglycosylase, penicillin-binding protein, 1A family. Bacterial that synthesize a cell wall of peptidoglycan (murein) generally have several transglycosylases and transpeptidases for the task. This family consists of bifunctional transglycosylase/transpeptidase penicillin-binding proteins (PBP). In the Proteobacteria, this family includes PBP 1A but not the paralogous PBP 1B (TIGR02071). This family also includes related proteins, often designated PBP 1A, from other bacterial lineages. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan].	0
NZ_CP011058.1|WP_045670437.1|2430329_2431019_+|response-regulator-transcription-factor	gnl|CDD|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	1.25986e-71
NZ_CP011058.1|WP_045673187.1|2406182_2406734_-|GNAT-family-N-acetyltransferase	gnl|CDD|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.17473e-06
NZ_CP011058.1|WP_045670433.1|2423268_2423667_+|response-regulator	gnl|CDD|381105	cd17553, REC_Spo0F-like, phosphoacceptor receiver (REC) domain of Spo0F and similar domains. Spo0F, a stand-alone response regulator containing only a REC domain with no output/effector domain, controls sporulation in Bacillus subtilis through the exchange of a phosphoryl group. Bacillus subtilis forms spores when conditions for growth become unfavorable. The initiation of sporulation is controlled by a phosphorelay (an expanded version of the two-component system) that consists of four main components: a histidine kinase (KinA), a secondary messenger (Spo0F), a phosphotransferase (Spo0B), and a transcription factor (Spo0A). REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	1.64025e-62

Protein sequences

>NZ_CP011058.1|WP_045670430.1|2417041_2418721_+|arginine--tRNA-ligase
MKTNVLNRLYEQIKEAIADAVVKAGLAEREQLPAFVLEVPKEKAHGDLATNAAMQLTKIAKKNPRQIAEAIVQNLEAGKASIESAEIAGPGFINFRLDKSFLYGVIADVAEAGADYGRAAARKGERIQVEFVSANPTGSLHLGHARGAAVGDALCSVLDFAGYDVDREYYINDAGAQVGNLAKSIEARYKQALGMEAEMPEDGYYGEDIFGFARELAAEKGDSLLSLPDEERFAFFRQYGLERELDKIKRDLARFRVSFNEWFSETSLYESGRITEALDALKAKGQVYEEDGATWLSSMTFGDDKNRVLVKNDGSYTYLTPDIAYHRDKYARGYDRIINIWGADHHGYIPRMKAAMEALGNDPDKLIVLIAQMVSLFQNGEKVKMSKRTGKAVTMEDLMDEVGVDAIRYFFTMRSMDSHLDFDMDLAISTSNENPVYYVQYAHARICSIFRQAEEQGVTVPSLDAVRFNKLTAEHEFDLLRKMGELPQEIAEAAAQYAPHRIVRYVYELASNFHSYYRAERVITEDGEQTQARLALLGAVRTVLANVLRLIGVSAPERM
>NZ_CP011058.1|WP_045670429.1|2416616_2417042_+|DUF1934-domain-containing-protein
MNEKRRVLIALESKQDGGAKTVQTFRGQFYPKDRSVYVRYDEDDELHGTVRTLLRWTPGELSLTRRGGVESEQTFAAGSRRPGRYRSPHLSFPLETETTELTAEQGGCGLPLTLQWSYTLHIGQQESSRFQLRLHIREDNS
>NZ_CP011058.1|WP_045670427.1|2415793_2416315_+|DNA-deoxyinosine-glycosylase
MSGRIHSFAPVIDGEAALLVLGSMPGAQSLQLGQYYGNPRNYFWRVLYGLSGDTPDESYEARLDYARRKGVALWDVIGSCERPGSLDANIREAVPNDLPELVRNYPNLRCFAFNGGKSFDTFRRHYGRDPAFSAVELIQLPSTSPIPTAAMRTLEDRLAAWRVIAPYLKQTES
>NZ_CP011058.1|WP_045673189.1|2415491_2415737_+|hypothetical-protein
MMPIHERLAELWTIRERRSLTEDEQCDFEHCLAVNAAHCRRLANLYNLSLLASMTGDHEWQHDICSKIEKLDGPPPAFRNR
>NZ_CP011058.1|WP_045670426.1|2413520_2414393_+|agmatinase
MKLDQKYSGNVFILSSEDYEASKAVIYGMPMDYTVSFRPGSRFGPARVREVSIGLEEYSPYLDRSLEDITYFDAGDLLLPFGNAARSLDIIGEFVRGVLADGKMPVGLGGEHLVSWPVFQAVYEKYPDLAIVHFDAHADLREQYEGEPLSHSTPLRKAAGLIGGKNIYQFGIRSGSREEWQFARENINFHPFEVLEPLKKVLPELAGRPVYLTIDIDVLDPSCAPGTGTAEAGGITSKELLEAVHAIAKAGINVVGCDLVEVAPAYDPTEQTQIVASKVIREMLLGFIRD
>NZ_CP011058.1|WP_045670425.1|2412661_2413489_+|polyamine-aminopropyltransferase
MELWYTEKQTESYGITAKIKETYVHEQTDFQQLDMIETEEFGTMLVLDGMVMTTDKDEFVYHEMVAHPALYTHPNPENVLVVGGGDGGVIREILKHPQVKKAVLVEIDGKVIEYSKKYLPNIAGGLDDPRVEVIVNDGFMHIHDHKNSYDVIMVDSTEPVGPAVNLFTRGFYQGIYEALKEDGIFVAQTDNPWFKADLIESVNRDVKEVFPIVRVYWANVPTYPSGLWTFTMGSKKYDPLQVDESAIPEIDTKYYSPRLHKAAFALPKFVEDLVK
>NZ_CP011058.1|WP_045670424.1|2410167_2412288_-|penicillin-binding-protein-1A
MNKPTAKPHKPGSKNKRRRTRFALLREQLLPRSRALTRLARRLGIAAALILALTAGFLLYLRIQSLPASSISQTSQIYDLHGSLIDTFHTGQNRKSVALADISPHLIEATVAIEDRRFYQHLGFDVKGMTRAALVNLEHMSTKQGASTLTQQLARNLYLTHERTWQRKLKEAVYTIQLEMNYSKDEILGLYLNQIYYGHGAYGIEAASQMYFGKHASRLSLAESAMLAGIPKGPKYYSPYMDMKNAKDRQKTILQAMVEGGRISQAEADEAFREVLAFKPLAADGSGGFAPYFRDYVRQIAVDVLGIDEARLSEGGVHIYTTLDPDAQKAAEQAVKEGMPPGSEQQAALVSIDPRTGYVKAMVGGRNYKTNQYNRALAGTRQPGSSFKPILYLTALENGMTPVTPFRSAPTVFTYDGGRKTYQPHNYNNKYTGGFINMREAIASSDNIYAVNTVMSVGADKVIEMARKLGIDSPMRPVPSLALGTFPVSPLEMASAFGTLAAGGVHVKPVAILRIEDSKGEVLYQAQPEAQRVVDAAHAYVLTSMMESVFETGGTGNRVAAMIKRPIAGKTGTTSSDAWLVGYTPELATAVWVGYDKGRALTKAEEHRAAPIFARYTEQALAAVPPKMFPIPEGVVGVYINPASGKLASLRCSGSRLEMFVRGTEPTEICGAAETDVSPGTSDGGSSADEAAKRSWLDHLKRWWNH
>NZ_CP011058.1|WP_052702894.1|2409439_2409943_-|hypothetical-protein
MKDLLNKAFSLGLGLAASTKDQAEKLAQELSTRGEMSKSDSQAFVKGMIERGQEARLGIENSVKERMRQTAEDLNLATRDEIRRLEERIARLEEKLGITVSGTDEDGSVQDESAALTKSSALTEAPGLSTVAAASGHPATVKAGTSAEITEGDGADGGGDGRADESR
>NZ_CP011058.1|WP_045670423.1|2407703_2409443_-|AarF/ABC1/UbiB-kinase-family-protein
MKAGRKFRHLHRYRDIAAAFARNGFGVIVKELGLLRHIPFPRIPAEESNSHTRTTGERIRLFLQELGPTFVKLGQIASTRPDLIPAEILAELAKLQDKVPPFPFADVKKLLEAELGAPLSSLFDRFDETPIAAASIGQVHTARLHSGEQIAVKVQRPGIRAVVETDLEILQDLARAAEHRLEWASRFGIRDLVDELSVSLLAELDYTLEGRNAERIAAQFHDNSHVIIPAIYWDLTTRKVLAMDYLNGISIGERELLAASGYELRSIAESVAGAVFEQLFIGGFFHADPHPGNVIVMPPRPEKPGSGKTRENRGRSPDVRPVIGLLDFGLVGRLTPGMKGHFASLVIAMRRQSTDGVIKAIEEMGLISEMADRFKLRREVDLLREKYYQVPFSEISLSEAVNDLFSVAYRHRVKMPKDFMLLGKTLLTLEGVLTSLDPEFTVVSVAEPFGKRLLLERMQPRRLAETAAGYALEYAALLGELPSRLRGIFALMQRGKLPLELTVPDVDRIMKRLDRISGRLSFSIVLLSFSILMAGLIIGSSLGRQPDLLTRFPALEIGFSIAGLMFLYMIISIFRSGRK
>NZ_CP011058.1|WP_045673187.1|2406182_2406734_-|GNAT-family-N-acetyltransferase
MEFITLDQLDDRLWPEARSIYRQAFPEHGRKSDAIIGGMFARRMSFLHVLTIGSQAAAMAITGRTRDDKALLIDYLAVREDLRGNGLGGKLLGAIRNWAAEQLKAKAIIVEVEADRTVPNLRRIRFWEQNGFILTDYVHHYIWVPEPYHAMVLPLAGHDDFPGDGQELFRLITSFHRRAYSKK
>NZ_CP011058.1|WP_082083718.1|2419126_2420158_-|S8-family-peptidase
MFQTGQVAHAAGDARSYNTAALSVGRELILDTTVLYRSLKGMLNLTGSSRKNRIKIREAVQKNFQYSKGIPWGVRHIRAPQAWSQTTGYRVKIAVIDTGVDFSHPDLKNSLAGGINLVNRAQPPHDDNGHGTHIAGTIAAANRIQGMIGVAPRAIIYPVKAFDQNGSAYVADIVLAIEWCIRNRMDIINMSFGMKSRSKSLLTAVVNAYNAGIVIIASSGNDGKRRTVDYPARYTHTISVGATTRQRRIAPFSNRGSLIDVYAPGDKIHSAWLNGAYNEMSGTSMATSHVSGAVALLLSKHPGISPAEVKAILKKSVQPIKGVKMLRMTGEIDILRMLKATDP
>NZ_CP011058.1|WP_045670431.1|2420558_2421119_+|DNA-directed-RNA-polymerase-subunit-delta
MSSNLSQKFDSERLKEMPMVDLAFEVLKSANTPYYYRDLMKEIAKYRGLSEAEINDVIAQVYTEINIDGRFACVGSNMWGLKRWYPVERSEDPVANAKRPRIINDDDDDDDDSYVDEEEETYSADEEDFDAFDEDREFEEGDDDEGVDEVIDDEDLDDEEAAEDELHDDDEDTDDSDDDDDQDDLK
>NZ_CP011058.1|WP_045670432.1|2421446_2423048_+|CTP-synthase
MTKYIFVTGGVVSSLGKGITAASLGRLLKNRGLKVTIQKFDPYINVDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFIDINLSKNSNVTTGKIYSSVITKERRGEYLGGTVQVIPHITNEIKDRVFRAGKEAGSDVVITEIGGTVGDIESLPFLEAIRQIKSDIGRDNVMYIHVTLIPYIKAAGEVKTKPTQHSVKELRSIGIQPNVIVCRTEREISEDMKRKIALFCDIDEGAVVECRDASTLYEVPLMLREQGLDDIVVNHLKLKAGEPDMTEWLRLVDRVKNLKRTTEIAIVGKYVALHDAYLSIVESLSHAGFDADAEVKLRWVDAEELTEQNVADKLQGVSGILVPGGFGDRGIEGKVVAIQYAREQRVPFFGICLGMQVAVVEYARNVVGLHGANSSEINPSTDYPVIDLLPEQKDIENLGGTMRLGLYPCKLAEGSLAMREYDDELVYERHRHRYEFNNEYRERIESAGLKISGTSPDGRLVEIVELPDHPWFLAVQFHPEFTSRPNRPQALFRGFVRAALNRNE
>NZ_CP011058.1|WP_045670433.1|2423268_2423667_+|response-regulator
MEKKKVLIVDDQNGIRVLLMEVFSSEGYLTFQASNGRLALEIVKRDNPDLVLLDMKIPGMDGLEILKHIKTINRDIKVIMMTAYGELDMIKEATDLGALMHFTKPFDIDEMRLAVNMQLRGGESNSRYAIGS
>NZ_CP011058.1|WP_045670434.1|2423801_2424656_+|class-II-fructose-1,6-bisphosphate-aldolase
MPLVSMNEFLPKAKENKFAVGQFNLNNLEFAKAITQAAMAEKSPFIFGVSEGALKYMGIEYTVAIAEAAAKESGLPIALHLDHGSSFEVAMKCIRAGFSSVMFDGSHYGLEENIELTKQVVKAARAMGVSVEGELGTIGGVEDDLSVADEDATLAKPEEAIRYYEETGVDCLAIAVGTAHGMYKGEPKIHYDIIQKVADAIPVPIVLHGGSGVPDEAIRQSIQAGVGKINVNTENQVACTKAVREALASNADIIDPRKYLNPAIKAMQAVVQEKIRLFGSSNQA
>NZ_CP011058.1|WP_045670435.1|2424875_2426129_+|UDP-N-acetylglucosamine-1-carboxyvinyltransferase
MDKLMIRGGRPLRGTVSISGAKNSAVALLPAAILAESEVVLDNLPHLSDVAVYADLLEQLGAGISWNGETMRIDSSSLNSIPMPNGKVKLLRASYYLMGALLGRFGEATIGLPGGCNFEPRPIDQHIKGFEALGAQVSNDQGSIRIVAKELRGAKIYLDVSSVGATINIMLAASRAKGLTTIENAAKEPEIIDVATLLNAMGAKIKGAGTETIRIEGVDGLHGCRHSIIPDRIQAGTYMIAAAATRGDVLIDGVIPKHMEAITAKLLELGVHVEEMDEAIRIVGAPRYEAVDVKALVYPGFATDLQSPMTSLLTQASGVSILTDYVYSNRFKHVPELVRMGANIRVEGRSAIIEGNQLNSAKVKAADLRAGAALVVAALTVADGITEITGVDYIDRGYDNLVEKLRALGADVWREKD
>NZ_CP011058.1|WP_045670436.1|2428705_2429971_+|radical-SAM-protein
MNLVYADEQGNVFDHPDWIGLGRSGDMVVELMEDELIPLPEGATLVGLPDTRPVGIDNETGEMRMLPGNYQAVGALLPQGFTRLCLPGYVKADRKAVLPLFGYTAVVWKDGGFHVAAHATDDPQRWNPENCDRKELGLSVERLLAKYPDNRLYKHLSNCALGYECLTASNTFLQRWEGAVPVSYSCNAGCFGCISEQPDDSGFPAPQTRMNFKPTVDEVVDIMLEHLKHSDSIISFGQGCEGEPSTQVKIIVEAMRRVREQTSLGYININTNAGLTDHIRAIVDAGLDLMRVSTISALDDHYDAYYKPRAYTLANVEKSLKYATDKGVYTSINYLIFPGVTDREEEIEAMIGFAKRTGLKLIQMRNLNIDPESYLQLIPKARGEIYGMKQMIEIFQQELPDVVIGSYTHVPPAPVALRNNP
>NZ_CP011058.1|WP_045670437.1|2430329_2431019_+|response-regulator-transcription-factor
MTTLLVVEDDVSLNKGIALTLAKDGVTIKQAYDLAAAERLFAAGGIDLIVLDVNLPDGSGFDFCEKIRRHSRLPIIFLTANDLETDIVTGFELGGDDYITKPFSLMVLRARVMAVLRRSVSHVEDKIAIDGMTLDFGKMEFEKEGGKIALSKTEQKLLKALVMNKGTILTREQLINQIWTVDAEFVDENALTVTIKRLRAKIEDEPSSPTYIKTVYGLGYRWSERNGHE
>NZ_CP011058.1|WP_045670438.1|2431011_2432055_+|HAMP-domain-containing-histidine-kinase
MNKSEEHRFGGTYFVFSFILFILVLGYTASVLYINAFDDTIIWISLLFAAFVFTVGAAWIWTLKTKIASIVKAVDDMVDRAIHGQATASDYVETNLSSLENKLIRYIDLSTTHERKLEAEKNKIKALISDISHQTKTPLSNIMLYSQLLRENPKLDEEAGQLADSVNAQSEKLNWLIQSLIKMSRLETGIISIHQTPKPVIRTISEAVSQIYDLSKQQGIGITIDCNRKIAAVHDLKWTSEALFNILENAVKYSGPGGKIHISAEAYEMFARVDISDTGIGIEEGELNLIFKRFYRCKRTAEYEGVGIGLFLAREIVALQGGYIKVSSKVGEGSVFSVYLPAASGQM
>NZ_CP011058.1|WP_045670439.1|2432152_2432839_+|ABC-transporter-ATP-binding-protein
MPILQIEALKKYYGKGEHVVKALDGITLSVEKGEFVVIVGTSGSGKSTLLHMLGGLDRPTEGKVYLDGNDIFSMNDEKLTIFRRRSVGFVFQSFNLIPILNVYENIVLPIELDGARVDKGYVNKVIGALGLKEKVNNLPLNLSGGQQQRVAIARALATKPSIVLADEPTGNLDSKTSQEVLILMKQMSEQFNQTIVMITHNEEISQTADRVIRIEDGTIAGRSAAVGR

Crispr_ID: NZ_CP011058_7

• CRISPR_ID: NZ_CP011058_7
• CRISPR_location: 2857503-2857645
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 2 spacers
• Cas_protein_info: TnsE_C

Consensus repeat of NZ_CP011058_7

Consensus_repeat	Method
CAGTCTAATACTTTATTTTCT	PILER-CR

spacers of NZ_CP011058_7

>7.1|2857524|34|NZ_CP011058|PILER-CR
CGCAATCGTTTAAAATTATTTTGAAGCATATTCT
>7.2|2857579|47|NZ_CP011058|PILER-CR
AAAGCTGACGATTTTCAAACTCGAAAACCGCGTCAAATCAACAACTC

CRISPR arrays and Neighbor proteins around NZ_CP011058_7

CRISPR arrays

The CRISPR arrays of NZ_CP011058_7

>merge|NZ_CP011058|7|2857503-2857645|PILER-CR
AGTCTAATACTTTATTTTCTCGCAATCGTTTAAAATTATTTTGAAGCATATTCTCAGTCTAATACTTATTTTTCAAAAGCTGACGATTTTCAAACTCGAAAACCGCGTCAAATCAACAACTCCAGTCTAGTACTTTATTTTCT

>NZ_CP011058|7|2|2857503-2857645|PILER-CR
AGTCTAATACTTTATTTTCTC	GCAATCGTTTAAAATTATTTTGAAGCATATTCTC
AGTCTAATACTTATTTTTCAA	AAGCTGACGATTTTCAAACTCGAAAACCGCGTCAAATCAACAACTCC
AGTCTAGTACTTTATTTTCT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011058.1|WP_045670759.1|2858895_2859789_+|LysR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|223656
NZ_CP011058.1|WP_045670757.1|2851704_2854842_+|type-I-restriction-endonuclease-subunit-R	unknown	unknown	gnl|CDD|223683
NZ_CP011058.1|WP_045670767.1|2871147_2872620_+|hypothetical-protein	unknown	unknown	gnl|CDD|236653
NZ_CP011058.1|WP_045670766.1|2869953_2870976_+|LacI-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl|CDD|224525
NZ_CP011058.1|WP_045670762.1|2861761_2863060_+|maltose-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|270304
NZ_CP011058.1|WP_052702919.1|2842777_2843908_+|RNA-polymerase-sigma-factor-RpoD/SigA	unknown	unknown	gnl|CDD|223642
NZ_CP011058.1|WP_052702921.1|2850328_2851687_+|restriction-endonuclease-subunit-S	unknown	unknown	gnl|CDD|341132
NZ_CP011058.1|WP_045673252.1|2866584_2867376_-|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl|CDD|225117
NZ_CP011058.1|WP_045670752.1|2837142_2838813_+|ATP-binding-protein	unknown	unknown	gnl|CDD|379165
NZ_CP011058.1|WP_045670754.1|2840583_2842197_+|hypothetical-protein	TnsE_C	TnsE	gnl|CDD|376049
NZ_CP011058.1|WP_082083746.1|2838823_2840596_+|TniQ-family-protein	unknown	unknown	gnl|CDD|379756
NZ_CP011058.1|WP_052702920.1|2843912_2847167_+|ATP-dependent-DNA-helicase-RecQ	unknown	unknown	gnl|CDD|223588
NZ_CP011058.1|WP_045670764.1|2866125_2866521_-|MerR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|133384
NZ_CP011058.1|WP_045670758.1|2854912_2857480_+|hypothetical-protein	unknown	unknown	gnl|CDD|372509
NZ_CP011058.1|WP_045670755.1|2847212_2848829_+|restriction-endonuclease-subunit-S	unknown	unknown	gnl|CDD|341201
NZ_CP011058.1|WP_045670765.1|2867529_2869788_+|FAD-dependent-oxidoreductase	unknown	unknown	gnl|CDD|378963
NZ_CP011058.1|WP_045670761.1|2860827_2861163_-|DUF1904-family-protein	unknown	unknown	gnl|CDD|370190
NZ_CP011058.1|WP_045670763.1|2863211_2864912_+|alpha-glucosidase	unknown	unknown	gnl|CDD|200472
NZ_CP011058.1|WP_045670756.1|2848815_2850339_+|SAM-dependent-DNA-methyltransferase	unknown	unknown	gnl|CDD|223363
NZ_CP011058.1|WP_045670760.1|2860314_2860677_+|hypothetical-protein	unknown	unknown	unknown

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_CP011058.1|WP_045670754.1|2840583_2842197_+|hypothetical-protein	TnsE_C	TnsE	8.9e-15	49.6	0.1

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP011058.1|WP_045670759.1|2858895_2859789_+|LysR-family-transcriptional-regulator	gnl|CDD|223656	COG0583, LysR, Transcriptional regulator [Transcription].	3.82025e-56
NZ_CP011058.1|WP_045670757.1|2851704_2854842_+|type-I-restriction-endonuclease-subunit-R	gnl|CDD|223683	COG0610, COG0610, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms].	0
NZ_CP011058.1|WP_045670767.1|2871147_2872620_+|hypothetical-protein	gnl|CDD|236653	PRK10137, PRK10137, alpha-glucosidase; Provisional.	1.60148e-06
NZ_CP011058.1|WP_045670766.1|2869953_2870976_+|LacI-family-DNA-binding-transcriptional-regulator	gnl|CDD|224525	COG1609, PurR, Transcriptional regulators [Transcription].	1.37166e-68
NZ_CP011058.1|WP_045670762.1|2861761_2863060_+|maltose-ABC-transporter-substrate-binding-protein	gnl|CDD|270304	cd13586, PBP2_Maltose_binding_like, The periplasmic-binding component of ABC transport systems specific for maltose and related polysaccharides; possess type 2 periplasmic binding fold. This subfamily represents the periplasmic binding component of ABC transport systems involved in uptake of polysaccharides including maltose, maltodextrin, and cyclodextrin. Members of this family belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.01125e-104
NZ_CP011058.1|WP_052702919.1|2842777_2843908_+|RNA-polymerase-sigma-factor-RpoD/SigA	gnl|CDD|223642	COG0568, RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription].	1.02645e-60
NZ_CP011058.1|WP_052702921.1|2850328_2851687_+|restriction-endonuclease-subunit-S	gnl|CDD|341132	cd17243, RMtype1_S_AchA6I-TRD2-CR2_like, Type I restriction-modification system specificity (S) subunit Target Recognition Domain-ConseRved domain (TRD-CR), similar to Arthrobacter chlorophenolicus A6 S subunit (S.AchA6I) TRD2-CR2. The S.AchA6I S subunit recognizes 5'... TGAANNNNNTCG ... 3'. The restriction-modification (RM) system S subunit consists of two variable target recognition domains (TRD1 and 2) and two conserved regions (CR1 and CR2) which separate the TRDs. The TRDs each bind to different specific sequences in the DNA. For example, S.AchA6I-TRD1 recognizes TGAA/TTCA, and TRD2 recognizes CGA/TCG. RM systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The host genome is protected from cleavage by methylation of specific nucleotides in the target sites. In type I systems, both restriction and modification activities are present in one enzyme complex composed of one DNA specificity (S) subunit (this family), two modification (M) subunits and two restriction (R) subunits. This model contains both TRD1-CR1 and TRD2-CR2. It may also include TRD-CR-like sequence-recognition domains of various type II restriction enzymes and methyltransferases and type I DNA methyltransferases.	5.40158e-66
NZ_CP011058.1|WP_045673252.1|2866584_2867376_-|helix-turn-helix-domain-containing-protein	gnl|CDD|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	1.38457e-24
NZ_CP011058.1|WP_045670752.1|2837142_2838813_+|ATP-binding-protein	gnl|CDD|379165	pfam13401, AAA_22, AAA domain.	8.0647e-15
NZ_CP011058.1|WP_045670754.1|2840583_2842197_+|hypothetical-protein	gnl|CDD|376049	pfam18623, TnsE_C, TnsE C-terminal domain. The bacterial transposon Tn7 facilitates horizontal transfer by directing transposition into actively replicating DNA with the element-encoded protein TnsE. Structural analysis of the C-terminal domain of TnsE identified a central V-shaped loop that toggles between two distinct conformations. It is suggested that a conformational change within the C-terminal domain of TnsE underlies target site selection by regulating stable engagement of the target DNA while providing a signal for activating transposition.	1.14085e-09
NZ_CP011058.1|WP_082083746.1|2838823_2840596_+|TniQ-family-protein	gnl|CDD|379756	pfam15978, TnsD, Tn7-like transposition protein D. TnsD is a family of putative Tn7-like transposition proteins type D.	2.70682e-81
NZ_CP011058.1|WP_052702920.1|2843912_2847167_+|ATP-dependent-DNA-helicase-RecQ	gnl|CDD|223588	COG0514, RecQ, Superfamily II DNA helicase [DNA replication, recombination, and repair].	6.12979e-59
NZ_CP011058.1|WP_045670764.1|2866125_2866521_-|MerR-family-transcriptional-regulator	gnl|CDD|133384	cd01109, HTH_YyaN, Helix-Turn-Helix DNA binding domain of the MerR-like transcription regulators YyaN and YraB. Putative helix-turn-helix (HTH) MerR-like transcription regulators of Bacillus subtilis, YyaN and YraB, and related proteins; N-terminal domain. Based on sequence similarity, these proteins are predicted to function as transcription regulators that mediate responses to stress in eubacteria. They belong to the MerR superfamily of transcription regulators that promote transcription of various stress regulons by reconfiguring the operator sequence located between the -35 and -10 promoter elements. A typical MerR regulator is comprised of distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their N-terminal domains are homologous and contain a DNA-binding winged HTH motif, while the C-terminal domains are often dissimilar and bind specific coactivator molecules such as metal ions, drugs, and organic substrates.	7.04663e-45
NZ_CP011058.1|WP_045670758.1|2854912_2857480_+|hypothetical-protein	gnl|CDD|372509	pfam13166, AAA_13, AAA domain. This family of domains contain a P-loop motif that is characteristic of the AAA superfamily. Many of the proteins in this family are conjugative transfer proteins. This family includes the PrrC protein that is thought to be the active component of the anticodon nuclease.	1.0222e-06
NZ_CP011058.1|WP_045670755.1|2847212_2848829_+|restriction-endonuclease-subunit-S	gnl|CDD|341201	cd17520, RMtype1_S_HmoORF3075P-TRD1-CR1_like, Type I restriction-modification system specificity (S) subunit Target Recognition Domain-ConseRved domain (TRD-CR), similar to Heliobacterium modesticaldum Ice1 S subunit (S1.HmoORF3075P) TRD1-CR1. The recognition sequence of Heliobacterium modesticaldum Ice1 S subunit (S1.HmoORF3075P) is undetermined. The restriction-modification (RM) system S subunit consists of two variable target recognition domains (TRD1 and 2) and two conserved regions (CR1 and CR2) which separate the TRDs. The TRDs each bind to different specific sequences in the DNA. RM systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The host genome is protected from cleavage by methylation of specific nucleotides in the target sites. In type I systems, both restriction and modification activities are present in one heteromeric enzyme complex composed of one DNA specificity (S) subunit (this family), two modification (M) subunits and two restriction (R) subunits. This subfamily also includes the TRD-CR-like sequence-recognition domain of type I N6-adenine DNA methyltransferase (M) subunit of Clostridium intestinale URNW (M2.CinURNWORF2828P). The recognition sequence of M2.CinURNWORF2828P is undetermined. Type I methyltransferases included in this group include two domains: one for methylation, and another (TRD-CR-like) for sequence-recognition.	6.43062e-72
NZ_CP011058.1|WP_045670765.1|2867529_2869788_+|FAD-dependent-oxidoreductase	gnl|CDD|378963	pfam12831, FAD_oxidored, FAD dependent oxidoreductase. This family of proteins contains FAD dependent oxidoreductases and related proteins.	3.02139e-137
NZ_CP011058.1|WP_045670761.1|2860827_2861163_-|DUF1904-family-protein	gnl|CDD|370190	pfam08921, DUF1904, Domain of unknown function (DUF1904). This domain is found in a set of hypothetical bacterial proteins.	3.00556e-30
NZ_CP011058.1|WP_045670763.1|2863211_2864912_+|alpha-glucosidase	gnl|CDD|200472	cd11333, AmyAc_SI_OligoGlu_DGase, Alpha amylase catalytic domain found in Sucrose isomerases, oligo-1,6-glucosidase (also called isomaltase; sucrase-isomaltase; alpha-limit dextrinase), dextran glucosidase (also called glucan 1,6-alpha-glucosidase), and related proteins. The sucrose isomerases (SIs) Isomaltulose synthase (EC 5.4.99.11) and Trehalose synthase (EC 5.4.99.16) catalyze the isomerization of sucrose and maltose to produce isomaltulose and trehalulose, respectively. Oligo-1,6-glucosidase (EC 3.2.1.10) hydrolyzes the alpha-1,6-glucosidic linkage of isomaltooligosaccharides, pannose, and dextran. Unlike alpha-1,4-glucosidases (EC 3.2.1.20), it fails to hydrolyze the alpha-1,4-glucosidic bonds of maltosaccharides. Dextran glucosidase (DGase, EC 3.2.1.70) hydrolyzes alpha-1,6-glucosidic linkages at the non-reducing end of panose, isomaltooligosaccharides and dextran to produce alpha-glucose.The common reaction chemistry of the alpha-amylase family enzymes is based on a two-step acid catalytic mechanism that requires two critical carboxylates: one acting as a general acid/base (Glu) and the other as a nucleophile (Asp). Both hydrolysis and transglycosylation proceed via the nucleophilic substitution reaction between the anomeric carbon, C1 and a nucleophile. Both enzymes contain the three catalytic residues (Asp, Glu and Asp) common to the alpha-amylase family as well as two histidine residues which are predicted to be critical to binding the glucose residue adjacent to the scissile bond in the substrates. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	0
NZ_CP011058.1|WP_045670756.1|2848815_2850339_+|SAM-dependent-DNA-methyltransferase	gnl|CDD|223363	COG0286, HsdM, Type I restriction-modification system methyltransferase subunit [Defense mechanisms].	2.749e-143

Protein sequences

>NZ_CP011058.1|WP_045670758.1|2854912_2857480_+|hypothetical-protein
MNTIFLDVERWLTQRPKWLQNAASRIVQKKLSEEDIKELINICKGESESDVSSYSVGVSPLGGLQSKSESNFLKLTSISDVNGINALNPKKPLQFNSNQLSIVFGHNGSGKSSYIKLLKHACGARESGKLLGNVFNDGQVEKQECVFVFNDGQEKQVKWSTEHGTIPQLSSIQLYDTACANVYVNEENEIAYEPWISSFFTELTEVCQVIGQALKEENDGIVIKPYNLPNEYQGTSVGKWLQKANYRTSSTEVDENSRWGIAEEESLNTYKLLLGEINPVDTAKKQMQLARNSNNLIAKLQTLIDTYNNENCNNYLDSKSEMVRKKKVAEQDAAKIFANSSFDGIGTESWKLLWQHARDFSEKHAYPLRAFPNLEDESKCVLCHQPLNESAKERLSAFESYVKGALMIDAQEAEERYLKHKARLIDIPTPESIVLHLNSIGLTDELDTTDFIEFINFLEKRKKDLEKVQSIEELNIVPQFAIFSSLAQIASTYEQQASSLMELAEQDNRKELSDKIKELEARKWVSQQRNLIFENIEKLKNKHKIEQAIRLTNTQAISTKKSELSNELITAEYIQRFNHELIQLGGNRIKVELVKSRVQRGHIYHKIQLRDCKFPVKTAEVLSEGEFRLVSLAGFLADVESNPNNTPFVFDDPISSLDQDFEEATVERLVKLSQKRQVIVFTHRISLLTLLSEKAKKKNINYDLTSLRSEFWGAGEPGELPIYANNTEKALNTLLNERLSKAKKILNEEGQEAYAPYMKGLCSDFRSLLERIIENDLMADVVHRFRRAINTMGKIYKLALIKYEDCQLFDELMTKYSRYEHSQSIEAPVQLPFPDELKNDMDIVKSWLEEFKNRK
>NZ_CP011058.1|WP_045670757.1|2851704_2854842_+|type-I-restriction-endonuclease-subunit-R
MAQYTTSYTESDLEQATLEWFEELNYNKVYGPEISPEGEYPERQFYQDVILKERLREALIRINKHLPHEAIEEAIRIIEVPRSPSLMLNNKAFQKMITDGIDVQYRNTNGDYPTEKVWLFDTHPDRIDNNDFLVVNQFTVIENQVDKRPDVVVFVNGLPIAVLELKSASNEEVGISDAYNQVQTYKKAIPSLFTYNAFMVISDGVNARVGTLTADEERFMMWRTIDGEDVASSSLPQLEVLIKGMFEKSRLLDIIKHFVLFQTDGERLFKILAGYHQYHATNKAIAATERATLKEGDRKIGVIWHTQGSGKSLSMVFYAGKLVLTLDNPTIVVVTDRNDLDDQLYATFSKSKDLLRQTPQHAEDRAHLKQLLSVEAGGIIFTTVHKFTPEEGESKYPVLTDRRNVIVMADEAHRSQYGFQAEMVASDEEASIKYGYAKYMRDALPNASYIGYTGTPVELTDKNTPAVFGDYIDIYDMTRAVEDGTTVKIYYESRIARLELSDNERPVIDEEYEEITEYQEYSQQEKLKSRWARLEALAGSEKRIKKVAKDMVDHYEQHKGAMFGKAMIVVMSRRIAIDLYKEIIALRPDWHSDDDNEGKIKIVMTGSSSDPAEWQPYIGTKRRREHLAKRMKDLNDSLEIVIVRDMWLTGFDVPSMNTMYIDKPMKGHNLMQAIARVNRVFRDKPGGLIVDYIGIADMLKSALQQYTENDRKTAGIDTNQAVDFMLERIQLIREQLHGHDFSKFASEKASDRMKAIVETIDYVLGLGDQGKRNFVNWTTELAKAYALCATTEAAETVNLEISFYKAVKSGIVKIITTENMKKTTNELDAELNQLISKSVMSDEVVDILEAVGLQKPNIAILSNEFLEHVRGLKQKNLAVELLRRLLQGKVKAVSRTSIVQSKKFSEMLEEAIRKYNNRTIETTQVIEELIQMAKEMNAAVKRGEDLGLIKEEVAFYDALASNEAAKELMGDLVLKQIAHELTQAIKNNIKVDWTLRENVRAQMRITVKRLLKKYGYPPDLEKMAIDLVLQQAELMAQAETEEFKY
>NZ_CP011058.1|WP_052702921.1|2850328_2851687_+|restriction-endonuclease-subunit-S
MNFSEWKEVALGDVVDIISGGTPKTAHNEYWEPAEIDWITAKDVSECENRTIKETSRKISKKGLEHSAARMLEPLTTVLIARGATTGKVALSTENMAMNQTCYGLQAKKGNDKLFIYYLMLSRYNSFRSIANGSIFDTIIGSGIKSIKVRIPSLPTQQWIGEVLASLDDKIELNNSINKNLEETAKALFKHWFVDFEFPNENGDPYKSSGGEFEESELGLIPKGWKISSLGQVIKVKHGFAFKSENFSEDKTNRILLTPGNFKIGGGFNDKKLKYYSNQADIPLDYILKTGDMLITMTDLSKSGDTLGFPAVIPIISDSEVLHNQRLGRVIYCTDLPIKGYVYNLLCSKEYRGYILGSATGSTVKHTAPSRIESYKIIIPNKDVLLKFDNIMSDVFNQLSLNYSENSNLSMLKDTILPKIMSGEIQIPMGRIYSESTDLPLEEKNKEQYSTT
>NZ_CP011058.1|WP_045670756.1|2848815_2850339_+|SAM-dependent-DNA-methyltransferase
MATANLGFEEKLWSMADKLRGSMDAAEYKHVVLGLLFLKYVSDAFEEKYDSLKNEPYADPEDRDEYVAANIFWVPKDARWSHIKNNAKKPEIGQIIDQAMIDIEKENASLKGVLPKDYARPALDKTRLGEVIDLFSFKVGDEDSRSKDVLGRVYEYFLSKFASAEGKNGGEFYTPNSVVRLLVEMIEPFKGRVYDPCCGSGGMFVQSEKFVEEHQGKLGDIAVYGQESNPTTWKLCKMNLAIRGIDSNLGEYHADTFHNDLHKNLKADYILANPPFNISDWGGERLTEDARWSHGIPPAGNANYAWIQHMVNKLAPSGVAGFVLANGSMSTSTTAEFEIRSKMVNADLVDCIVTLPGQLFYSTPIPVCLWFMSKNKAPRGLRDRRGEILFIDARKMGQMVDRTHRELTLAEINKIVNTYHAWRGQSEAGTYEEIKGFCKAAKLAEVQEHEYILTPGRYVGIEDVEEDSEPFEDKMTRLTSELAEQFAKSRHLEDEIRKRLGGIGFEF
>NZ_CP011058.1|WP_045670755.1|2847212_2848829_+|restriction-endonuclease-subunit-S
MIESFWNLCLLHEIHSRDQLLREAIRVNRTRQSIERHKTIEWEQEASAEELFQWMKEQVGERELGHFPGDRDLFRRLYHAGKELDLLEYALRTLQQDRITGTLMAHPGIMERFIEMCTQSQFSSILITETEKFLQGLYETKCYMRDLHVTLLSENYMFCRLLKIYFELNPRITVIQGSIYQPLQMEERFDAILSIPNFGLKLQDEDEISIRESEGAAVSFLLPVLQERGRLSVTFPSRMMFQGGAIASWRHEMNMEAPVQSIYTLPDGLFRPYTSVRTYQVEFGKEIPQEVRIGRLVIRKQTLEIDREVMIHPDQFQLWDNWRIDLLLDEDQEKLRSFQQAAMPKEKLRNIADIFRGKAISKQELKTGKIRVLNISNMDDGEVKLEELETIDEEERKVKRYEVLSGDLVMTCRGTVIKLAIFPDSEEMVIASANIIVLRFKSSLLAQFVKVFLESPTGMAFIQSFQRGTTVMNLNPSDVGEIEIPTLPEEKQYQLVNHYLDEKKRYKAVILEAHVRWEQAKQEVYQRIYKEELANGNS
>NZ_CP011058.1|WP_052702920.1|2843912_2847167_+|ATP-dependent-DNA-helicase-RecQ
MNNYKRIEQDLLRMMQDSNQKVLFVFKGFPASFFETMPLRKLIPYSVTISIHELDQAKASILPEMFQSLHQINQAAWCSYEEYQVIGTEVLSLYFNIMIYENNVYHRTFPCLYSIPAAERLFITYFEDENSTEEPEQDPDFEIFQKYYGTLKKIDNNWFIVYADSEPAIDYYSIPDLELPESKLANDDTAELELVEEEDVLVGLIARVLSNTATEQQEVRISYTGDLSVSIHRYRERIQLLQSLLPLITFVLTTKTTSLVPQLYETEYLRVLEKYWNYTSFRDLRMYKDIHDPEFKKETVFIPQSQVIDSIVQQATLAHQGESYRDIFVTSPTGAGKSVMFQVPAIYLAEKYGLMTIVISPLIGLMTDQVQGLMDRNVHMSATINSEITPVEKMGIIERIRTREISILYISPETLLSRSDIAQLIGDREIGLFVIDEAHIVTTWGKAFRSDYWYLGSYLQRLRKKEMQFPIATFTATAIYGGVEDMYAETRDSLNLINPISYFGYVKRDDLEVRIKKSSQSKERFKEYLEDKFKVLVFRLEQYLAKDEKTLVYFPTVGLINQFHEFTKIFASERLRQHLTSYYGPLSKDLKNGNYKRFKEGDSLVMLATKAFGMGIDLPDIVNVYHFAPTGNVCDYVQEIGRAARALERGYAYFDFLPKDFVHVNRLHGISTIRKQQLVQVMAKVVQLINENKHSSNVRHLLVNAEEFRYIFQQGAEASDEVDNKLKTALLIIEKDFKAKMGYSPIIARPRSVFAKEYFMIQKDQEQQILERYGRYFKKVAEGHKTAYGNIYTCDMKNLWESRFQSLSFPQFKYKFHSKDEDLGLPFLVNLLPVLQLELVLKSVHRDQFTNELNHQLEQIADIFGAYAKERSYFSISEFAAELKKKIKGDKYFCENLALILIHSADHYDRIMQKHSNFYQRFMKYSESKEKYSIQNSGYAGFLDWIKIEWRQILNQGQQINTEPSHVTMFLPKVNPEKVEKTFILLGILEALGNLIYRVNGGDNPEIFLRINSRMQIERSIQNPARYINYILENVKERHYLSVAMLTHLFENEVDNDRFWEYIENYFLGIIPDEVLAKTGNSRS
>NZ_CP011058.1|WP_052702919.1|2842777_2843908_+|RNA-polymerase-sigma-factor-RpoD/SigA
MGKSIREVQQVFERTFPDKQTIPFAEAKALLQSLSDEQLENEDVEMFLEIMGFQNILHNDQSKEANEEPSIDDILNMEWKPVSDPKVMDNSSSQSVYSRNTILLKGYHETRNDLEFEQLVVDNMKLVHKLASKYLRYSNHQHSYDDLVSEGTIGLMDAIRKFDVNKDVQFSTYAVWWIRQRIIRAIVDTGTMIRVPVHMFELIQKIRREEQAYEVENNIPDQQTIIMKLGISAAQYERAKIVEHQVLGMTSTEQNISEDGQESELSQFISLETHRLLGEYSKIYFDPALLAEQHDLKKLLHELITTHLKPREQEVILERFGFGDCKPKTLEKVGEQFGVTRERIRQIEAKALKKLANKMRKRAHRDDYYWPEPMGG
>NZ_CP011058.1|WP_045670754.1|2840583_2842197_+|hypothetical-protein
MATLTLRSWPFPENHEAELVWFGSPFMDHKGNWRIRVAFKTSVEGIKVVSYPWGTIPFLRIGQIYSNGTYDQITPMSGSAFHFTIDALNHGTLTNGFKLPKRLIDFGKNPELGLQNIIQYQANGLTYCIPVIELIRALFINSRYLAYYLLQPHGLDLLIDNSYSLAGTLHFDLSNRVPAKLATESNVRHLSWIYTDPMIRSLWDSVYQSLFSHAVKNSPYNPSATLKKGVPLTIDLPPLGPIEMHTRGVQFIDYVLVKEIIAIGGFQHPSNEILFWHPSKKRREWSSGDKTIRMIPGSKNTDYVLNDQSDNAKEDLNQDVVETSPTIMQFANYPVVETRRPSVRHSNTGNEVIVSTGRGGKHTAASEEVSTQDSMVGGDTPPIDFQTLETIPASDAIGLEPFFQMIEMLKKTFQVKVRMSVVRVPPGKRFSVCMNGARRTCAIVQVTTEITTSYIVEVARPDDWSISTLILRPRNQLSYRIIERNIKQLLDGLVQKGGHWDQSVLNQCDTMNIEKLKHYQSDTILEWASRLAGKLMM
>NZ_CP011058.1|WP_082083746.1|2838823_2840596_+|TniQ-family-protein
MSKWCALPIPYPDELLYSVIARYHIRSNNTSPKWTLREVFGTDNVIPTIDLPSHLDALSRRNVVQIMADEWIRKHTFYSYYAPFLPDSRAMRVKALMRSSDGSGIHALVGITASTIDRTDRLWLCPSCYEQDIQFYGEPYWHRVHQLPGVYLCPHHRKVLHKLTSPLSDRHGLNVLPISRHMFRSIAVIEDLPDKLIDRLSDIAEDIHLLVQLDNLPALYDLRQAILPRLAEKGYVTVSSRIRQQKLCEQLVLFYGRELLDLIDSDPTESRYSWLEQSTRTARRAIHPLRQLLLIRFLYGSFREFLDRTDGTIAPFGNAPWPCLNKAAEHYKELVITQCDITRCSDTGRPVGTFVCSCGFSYSRRGPDKSEADKYYRGRIKTFGPIWSDKLKQYMQDGMSYRSAAERLGVDTNTVIKYANGKLPERSGPLKQKHVKKATAAPSSINIRKSPRIRVDWEKRDLELSWLVEQVCKAILAESDAKPVRNTITLLGKRIGKLSWLEKYQHKLPVTMSILTSYVESVSQFQIRRVRWAAERLSGEWPIKRWKLEKLAGLRPDYSQEVLDEINRCIGQSRLLQPFTSPEETSSWQH
>NZ_CP011058.1|WP_045670752.1|2837142_2838813_+|ATP-binding-protein
MSEFDVPLFHFSRGEFVEADYQDPLLEDYRNNPLLEALPPIWDDKTVVNKLASKPIFNASERDLPVHLRLHCVQRISRDFFRPLSRHLELQQSISRLIRDGYVGRNPLTPNYALRARKDAYELIMQGNTSGYPVNTPTSAGFALVGISGIGKSSSLLRILQMYPQVILHRKYRGQDMPAPFQIVWLKMDCPHDGSIRGLCLNFLLAVDSLVGTKYYKKNVTKNPDELLPLMAQAAAVHCLGVLVIDEIQNLQEAKDDRAAQMLNFFVQLVNTIGLPVILVGTYKALPALNGEFRNARRNSGQGDATWHHFKKDEEWTWLLQGLWKYQWTDKKVELDQEFIDVMYEESQGISDIAIKLFMLTQWRALDKELESVTPGLIRSVAKDRLTLIRPALEALRSGKKAQIQKFADIYDSVSIDDYLDRIEAEQRQAERLEVIRTELGYDVTEQTINEVSAWLIEAGVTQAIASQAAEEVTKIHLHELDEIDLHKEALKVALQKQSALVNKSSQQRSKTKPKVIPSNPNDLRLIVAQGRKKKMSAYDSLKAADYIKNPMEFLG
>NZ_CP011058.1|WP_045670759.1|2858895_2859789_+|LysR-family-transcriptional-regulator
MTFSQLQVFTKVVETGSFTKAGEALRMTQSAVSHAIANMESELGVPLIIRDKKQGIILSDFGKHILKLAGEILNRIDQIEQAAASEKGLDVGTIRIGSFPSATARLLPKIISKFKQQYPRIEVVLFDGDDHEVSEWLNNRVIDVGFVAQLGRNDKMIPLTKDKMVAVIPKGYQFGDAQAIPVWKLSDSPFIMSKGGCEPFIREIFAHAGLSPSVQFEARDTNTMLNMVQEGLGITIVPELALPDKLPDIEVRDLDPTFWRYLGLYCPHVDEVTPAIQKFISMGQSLFQALEQKVEDV
>NZ_CP011058.1|WP_045670760.1|2860314_2860677_+|hypothetical-protein
MAFEFTDPGYGRVHFLTIACYMVQHEGYSDELYVWVQTALRKYLEEGHTTEMIRQDSAQGPGRTKGIPMPADAPPLPKVAWSMTVAGVASQMQDAESYCKLIEQWGHTTLQEMGPLVLKR
>NZ_CP011058.1|WP_045670761.1|2860827_2861163_-|DUF1904-family-protein
MPQLTIRGIAPEQVIAISEAMVQQLADVCGCGTDNFTLDCLQTVSAMDGKRVDTYPFVEVAWFERGSQTRDLFAETIMKHFLTAGVREVEIAFKVYSQDGYYINGVRCDKL
>NZ_CP011058.1|WP_045670762.1|2861761_2863060_+|maltose-ABC-transporter-substrate-binding-protein
MTRKTIVIALICMMVFTLAACGSNKSGSSSNEPSTGGQTSANAPAAGTDSEELKPEEGAELVLWTIDNEAIQNTAKEFEAKYNVKVKVENVMYWDSIARLTTDGPAGTGADVMAFNHDALGQAVKSGLVLPNDQFEEETKSNMTKQSIDASSFEGTLYGYPFSVFTHALYLNKDLVKDAKLDSWDDIKAFAKQFNDIPNNKFGFMYEAGTMNYNYEWMSGNGGYVFGNNGTDKNDIGINNEGAVKGMEFFRSLKEILPLDLSDLTADVKNGLWEQGKVAINMDGTWKATDYKKLPFEVGLIPLPAMPGGAEPLPFSGVTSFYVTAYTKYPNASRLLAHFLTTKESLLKHYEATGIIAPYAGFENEEKVQSDEIMQGFLKQVANTQVMPNIPEMKYFWLSVDPVLTEVWNGADIKTTLDKAAANMKASISSAK
>NZ_CP011058.1|WP_045670763.1|2863211_2864912_+|alpha-glucosidase
MTQAWWKEAVVYQIYPRSFMDGNGDGIGDLAGITSRLDYLQELGIDVIWLSPVYKSPNDDNGYDISDYRDIMDEFGTMEQFDTMLEEAHRRGIKIMMDLVVNHSSDEHAWFMEARKSKDNPYRDYYIWRPGREGGGAPNNWVSCFGGSAWEYDAQTDEYYLHLFTRKQPDLNWENPRLRREVYDLMTFWLDKGIDGFRMDVINFISKVEGLPDAALQEGAEYAWGGEYFLNGPRIHDYLQEMNREVLSRYPVMTVGEMPGATVEEAKLYTGLQRNELQMVFHFEHVNVGDGKFGKWTPNPWKLTELKAILSKWQYGLREDGWNSLYWSNHDQPRAVSRFASDKEEYRFVSATMLATCLHLHQGTPYIYQGEEIGMTNVAFDSIEDYRDVETLNAYRDLAGTGKLTHEQMMDGIHQRSRDNGRTPVQWSNAPHGGFTTGTPWIAVNPNFTHINMEQSRQDPDSIYHYYRALIRLRKANPIMVYGDYDLLLENDEQIYAFTRTLDAEKWLVLCNFSDQTVLFSAPEELASYTADQLIIGNYESNGDETLGSITLRPYETRVYRLGNET
>NZ_CP011058.1|WP_045670764.1|2866125_2866521_-|MerR-family-transcriptional-regulator
MEKLLTIQQVADVTQLTVHTLRYYENIGLLSSIHRNKHGYRCYSSEDITWIEFLTRLKATGMSINKMIEIAELRRQGDSTLTTRRILLEEHYKEVQEHMIELQKNLDMLAHKIVIYKEMEKNYALEQKMEQ
>NZ_CP011058.1|WP_045673252.1|2866584_2867376_-|helix-turn-helix-domain-containing-protein
MNKPWRFVPAAISHVYWNRKEQFEMKVDTYDEWVLFAVTEGRFRYRIEVAEGVSGFGDIVFCPPKTPFHREAIEPVSFHFYRFRWEPAPSLPNDPLSAEPRPVGNIEIVDRSRLSSNYFYLKQLSGLEDEQQLASIQSLFGDLWHLICRELNRNRVQDEQMLMAARWLQEHASKPLRIRDLAAAIYINPVQLTRRFQAAWGRTPIDYLTSLRIERAKSLLLETDMTLDDIAENCGYENGFYLSRVFTKVVKIAPSRFRKMNRL
>NZ_CP011058.1|WP_045670765.1|2867529_2869788_+|FAD-dependent-oxidoreductase
MRSETVSTDIAVIGGGLAGVCAAIAAARLGQTVALVQNRPVLGGNSSSEVRVWVCGATAHGTNRYARETGIMGELFVENQFRNPEGNPYFWDLTVLEAVKAEPNIQLFLNTDVHEVEAGGEEHERTIRSVTGWMMGSERRIRFESRMFLDCTGDGLVGFLAGARYRLGREARDEYNESWAPEVADNITLGSTLLFYTKETGQPVKYKPPGFAKDIAKTSIPLKRVIRSGDNGCAYWWIEWGGELDTVHENERIRDELWSVIYGIWDYIKNSGLFPGSETMTLEWVGSLPGKREYRRFIGDYVLNQNDIIAQREFEDRVAFGGWSIDLHPPQGVYSTESGSKHLHADGIYHIPFRSLYSVNVSNLLFAGRNISASHVAFGTTRVMATCAVIGEAAGTGAALAVKKGVAPRTIAAEYMEELQQTMLRQDASIIGLRSTDSADQALRASVSASSTLRRLAVEGDAVPYPLKQDIGLLIPVSPELRQLEFLLDCSSATTLQAELWSTGRAENYVPHRLEVQAEASVVPGERQWITVPLAWKPGNAANAFIVLKANEALTLFLSKDSLTGVLPFEKGKKPKVSDSLEDHDIEQPVVQWRMRELSRKSFCFRAAPDTDAFTADNVIDGYLRPYGGLHTWVSEPLAAGGEAVLELEWPTADPAIVREVHLIFNDDVNEDLINLHHHRTPFEVIPELVKDYRIEAETAPGEWKVLHRETANRKRKRVHRFETPILTAGIRVVVESTNGSPAAEIIAIRVY
>NZ_CP011058.1|WP_045670766.1|2869953_2870976_+|LacI-family-DNA-binding-transcriptional-regulator
MSITLKDIAKRVGVSVTTVSRVINYNDRTICSEDTQKLIWSLANELGYQPKNNRTLEENKETLKIGYVLSTEIMSDPYYSQLLRGIESEALRQGATIVFGCLAPDLYNPESFRKIVNESKAEAVIYLNGAGDLFAELIKEDNLHIVMAGMEQNSLAKSMPDHIRRNYDYVGVDFYNDTLHWLLTRLLKRSRHNGYIGPKRSARCSAFLEAHRIANAEIDPDCMLFTENFKAESGKAVVTEFLTKGKKPPEAFFAGCDTLAIGAMQALKEHQYDIPKDVKVLGFDNIDMAGYVSPPLTTIEIPMINIGRAAVKAAAERIRGERDYQLNYILPTNFVERESL
>NZ_CP011058.1|WP_045670767.1|2871147_2872620_+|hypothetical-protein
MTISFTTDNPLLNRKVEAAIQGLISNTRPLFGYREPVLIEGGIYAGIWLECGPLESTVYGMIRPDIARACHDIFFANQREDGYIPAVIFKDRCLEGQIQMVVPIAATAYETALKLEDEAFLERSYLACSRWDRWLGNHRNTRGTGLCELFCEWDSGHDNSPRLTGIPHACPEFNAAICNDSETLPYLAPDLSATVYGGRIALAAMANRLGRHQEASEWSRKAEHIRAAILKYCFDEDELFFYDLDNKNQFVRVKGDIITRILGEHVVDQEMFERIFHRHICNPERFWSPFPFPSIALDEPAFNHDFSSNAWSGASQALTALRAPRWMEHYGKPAHLNELMKRWVSAIVDDDGFKQQMNPWTGQFHESEGYSPTMCVLIEFISRLYGIRSRDGLLEWNCHMPAGTTCSHYSLSTVAGLAEMKRTREKTTILLNGTAEFEVSGSCRVVTDRWGEVDSITGTRLNAEQVSISWPDSTIIHLSVEPNETVKIQI

Crispr_ID: NZ_CP011058_8

• CRISPR_ID: NZ_CP011058_8
• CRISPR_location: 2942601-2942706
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP011058_8

Consensus_repeat	Method
TGATCATCGCAACAAAAACTGCTTCGAAAGCATTCGCTT	CRISPRCasFinder

spacers of NZ_CP011058_8

>8.1|2942640|28|NZ_CP011058|CRISPRCasFinder
AAGTTTTTGTGAAGCTTGCCTGCATGCT

CRISPR arrays and Neighbor proteins around NZ_CP011058_8

CRISPR arrays

The CRISPR arrays of NZ_CP011058_8

>merge|NZ_CP011058|8|2942601-2942706|CRISPRCasFinder
TGATCATCGCAACAAAAACTGCTTCGAAAGCATTCGCTTAAGTTTTTGTGAAGCTTGCCTGCATGCTTGATCATCGCAACAAAAACTGCTTCGGAAGCATTCGCTT

>NZ_CP011058|8|6|2942601-2942706|CRISPRCasFinder
TGATCATCGCAACAAAAACTGCTTCGAAAGCATTCGCTT	AAGTTTTTGTGAAGCTTGCCTGCATGCT
TGATCATCGCAACAAAAACTGCTTCGGAAGCATTCGCTT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011058.1|WP_045670806.1|2940147_2940798_+|DsbA-family-oxidoreductase	unknown	unknown	gnl|CDD|239322
NZ_CP011058.1|WP_082083753.1|2945785_2946529_-|Crp/Fnr-family-transcriptional-regulator	unknown	unknown	gnl|CDD|223736
NZ_CP011058.1|WP_045670805.1|2938498_2939527_+|potassium-channel-protein	unknown	unknown	gnl|CDD|369572
NZ_CP011058.1|WP_045670811.1|2944992_2945763_+|formate/nitrite-transporter-family-protein	unknown	unknown	gnl|CDD|376497
NZ_CP011058.1|WP_045670801.1|2929866_2930445_-|TetR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|380062
NZ_CP011058.1|WP_045670812.1|2946797_2947250_+|GAF-domain-containing-protein	unknown	unknown	gnl|CDD|379056
NZ_CP011058.1|WP_045670814.1|2947980_2949099_+|PAS-domain-S-box-protein	unknown	unknown	gnl|CDD|226951
NZ_CP011058.1|WP_045670802.1|2932238_2933309_+|23S-rRNA-(adenine(2503)-C(2))-methyltransferase-RlmN	unknown	unknown	gnl|CDD|237717
NZ_CP011058.1|WP_158453672.1|2950325_2950481_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP011058.1|WP_045670813.1|2947334_2947988_+|response-regulator-transcription-factor	unknown	unknown	gnl|CDD|225107
NZ_CP011058.1|WP_045670810.1|2943391_2944627_-|acetate-kinase	unknown	unknown	gnl|CDD|234680
NZ_CP011058.1|WP_045670808.1|2941760_2942558_-|alpha/beta-hydrolase	unknown	unknown	gnl|CDD|223669
NZ_CP011058.1|WP_052702932.1|2949076_2950114_-|hypothetical-protein	unknown	unknown	gnl|CDD|226122
NZ_CP011058.1|WP_045670803.1|2933337_2933832_+|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|366181
NZ_CP011058.1|WP_045670815.1|2950660_2951566_+|acetamidase/formamidase-family-protein	unknown	unknown	gnl|CDD|225279
NZ_CP011058.1|WP_148505237.1|2934777_2938314_+|S-layer-homology-domain-containing-protein	unknown	unknown	gnl|CDD|236090
NZ_CP011058.1|WP_045673265.1|2939637_2940072_+|Rrf2-family-transcriptional-regulator	unknown	unknown	gnl|CDD|224870
NZ_CP011058.1|WP_052702931.1|2942751_2943342_-|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|224228
NZ_CP011058.1|WP_045670807.1|2940909_2941551_+|NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl|CDD|225462
NZ_CP011058.1|WP_045673264.1|2930730_2931903_-|ABC-transporter-permease	unknown	unknown	gnl|CDD|274414

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP011058.1|WP_045670806.1|2940147_2940798_+|DsbA-family-oxidoreductase	gnl|CDD|239322	cd03024, DsbA_FrnE, DsbA family, FrnE subfamily; FrnE is a DsbA-like protein containing a CXXC motif. It is presumed to be a thiol oxidoreductase involved in polyketide biosynthesis, specifically in the production of the aromatic antibiotics frenolicin and nanaomycins.	6.24439e-56
NZ_CP011058.1|WP_082083753.1|2945785_2946529_-|Crp/Fnr-family-transcriptional-regulator	gnl|CDD|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	1.01325e-41
NZ_CP011058.1|WP_045670805.1|2938498_2939527_+|potassium-channel-protein	gnl|CDD|369572	pfam07885, Ion_trans_2, Ion channel. This family includes the two membrane helix type ion channels found in bacteria.	6.84699e-15
NZ_CP011058.1|WP_045670811.1|2944992_2945763_+|formate/nitrite-transporter-family-protein	gnl|CDD|376497	pfam01226, Form_Nir_trans, Formate/nitrite transporter.	3.71489e-81
NZ_CP011058.1|WP_045670801.1|2929866_2930445_-|TetR-family-transcriptional-regulator	gnl|CDD|380062	pfam17935, TetR_C_27, Tetracyclin repressor-like, C-terminal domain. This is the C-terminal domain present in putative TetR transcriptional regulators.	6.11794e-26
NZ_CP011058.1|WP_045670812.1|2946797_2947250_+|GAF-domain-containing-protein	gnl|CDD|379056	pfam13185, GAF_2, GAF domain.	1.40935e-07
NZ_CP011058.1|WP_045670814.1|2947980_2949099_+|PAS-domain-S-box-protein	gnl|CDD|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	1.01327e-50
NZ_CP011058.1|WP_045670802.1|2932238_2933309_+|23S-rRNA-(adenine(2503)-C(2))-methyltransferase-RlmN	gnl|CDD|237717	PRK14455, PRK14455, ribosomal RNA large subunit methyltransferase N; Provisional.	0
NZ_CP011058.1|WP_045670813.1|2947334_2947988_+|response-regulator-transcription-factor	gnl|CDD|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	2.85323e-80
NZ_CP011058.1|WP_045670810.1|2943391_2944627_-|acetate-kinase	gnl|CDD|234680	PRK00180, PRK00180, acetate kinase A/propionate kinase 2; Reviewed.	0
NZ_CP011058.1|WP_045670808.1|2941760_2942558_-|alpha/beta-hydrolase	gnl|CDD|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	2.39303e-12
NZ_CP011058.1|WP_052702932.1|2949076_2950114_-|hypothetical-protein	gnl|CDD|226122	COG3594, NolL, Fucose 4-O-acetylase and related acetyltransferases [Carbohydrate transport and metabolism].	4.87454e-18
NZ_CP011058.1|WP_045670803.1|2933337_2933832_+|GNAT-family-N-acetyltransferase	gnl|CDD|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	8.93211e-16
NZ_CP011058.1|WP_045670815.1|2950660_2951566_+|acetamidase/formamidase-family-protein	gnl|CDD|225279	COG2421, COG2421, Predicted acetamidase/formamidase [Energy production and conversion].	5.68773e-82
NZ_CP011058.1|WP_148505237.1|2934777_2938314_+|S-layer-homology-domain-containing-protein	gnl|CDD|236090	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated.	2.16076e-09
NZ_CP011058.1|WP_045673265.1|2939637_2940072_+|Rrf2-family-transcriptional-regulator	gnl|CDD|224870	COG1959, COG1959, Predicted transcriptional regulator [Transcription].	2.71119e-30
NZ_CP011058.1|WP_052702931.1|2942751_2943342_-|TetR/AcrR-family-transcriptional-regulator	gnl|CDD|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	1.72099e-12
NZ_CP011058.1|WP_045670807.1|2940909_2941551_+|NAD(P)-dependent-oxidoreductase	gnl|CDD|225462	COG2910, COG2910, Putative NADH-flavin reductase [General function prediction only].	3.98181e-92
NZ_CP011058.1|WP_045673264.1|2930730_2931903_-|ABC-transporter-permease	gnl|CDD|274414	TIGR03062, hypothetical_protein_lp_1332, YhgE/Pip C-terminal domain. This family contains the C-terminal domain of a family of multiple membrane-spanning proteins of Gram-positive bacteria. One member was shown to be a host protein essential for phage infection, so many members of this family are called "phage infection protein". A separate model, TIGR03061, represents the conserved N-terminal domain. The domains are separated by regions highly variable in both length and sequence, often containing extended heptad repeats as described in model TIGR03057.	5.48678e-28

Protein sequences

>NZ_CP011058.1|WP_045670808.1|2941760_2942558_-|alpha/beta-hydrolase
MKKPTILFIHGAFMTPKSWDPMIRYFTAKGYPTLAPAWPFHEQEPAVLRADPSPLLSRITLELLTEHYAKIIRALPEKPILIGHSFGGLLTQLLMDRDLGLMGIAIDPAAPRGIIAGTYPTVVKSVGSILSKPWRKTGMLSLKEFKYSFVHTLPKAEQELAYEQHVVPETSRIFFQAALSALSPKSPAAVNFNNGNRGPLLIIAGEFDRIVPAAMVRKNYRLYKSGAVTDFKEFPGRTHWIIAQPGWEEVADYIEAWMVGQGAYL
>NZ_CP011058.1|WP_045670807.1|2940909_2941551_+|NAD(P)-dependent-oxidoreductase
MKIGIIGASGKAGSLILKEAVSRGHEVTAIVRDAAKADAESAAVLEKDIFALTAADIQPFDVVVNAFGAPLGQEHLHVEAGRVLIGALQGAPATKLIVVGGAGSLYVDEAKIVRLVDTPEFPEIFKATATNQLTNLDELISSTGIKWTFISPSAYFNPEGKRTGTYTKGKDHLLVNAKGESYVSYADYAIAVVDEIEHPQHENERFTLVSEAE
>NZ_CP011058.1|WP_045670806.1|2940147_2940798_+|DsbA-family-oxidoreductase
MSLKISVYSDYVCPFCYLAKAPFEEAIRGKDVEVEWKPFELRPSPAPQLDPVNDPQKRAAWDSYIAPAAAKWGVEMKLPNVSPHPYTGLAFEGFHFAAAKGKGEAYNNRIFKAFFQEEQNIGELDILTRLAGEIGLDEAEFRQALQAGTYRDAQREALQHAFEEARITAVPTFIIGEERLQGAAGKDVFEQVLAKELSKRTADAPAGLSCDVNGSC
>NZ_CP011058.1|WP_045673265.1|2939637_2940072_+|Rrf2-family-transcriptional-regulator
MKISSRFTVGVHILSLVSIQQSKVLCTSEWIAGSVNTNPVVIRKIMGMLKKAGLLEIRRGTGGAFLRKPLSEIKLLDIYKAVEVVEEGELFQFHDHPNPDCPVGANIGAVLEIVLLRAQEAMEQVLANIYLDDIVTSLNKKIGI
>NZ_CP011058.1|WP_045670805.1|2938498_2939527_+|potassium-channel-protein
MLFLTKFLMRIVRMNNNFIFGVSVLFIACSSLLAYELEPETFGNRFNGLWWVMTTVTTVGYGDYYPHTAAGKMLGMVVYIFGIGLISVTISKIVDAMFMYQRKKEEGKLRYVGQNHFVIIDWSKHAENAIKEILDTDPQAEIVLIDLLEKSPLFHDRVHYVQGNAMQLETLEMANMSKARAVFIFADEVTQFQDTVRDPSFIDGKTLLIATMIERNFGHVYTIAEVRNKENVPNFQHIRIDEFIFGSETISQLAVRSAFNPGSSKILTQLLTRSYGEDLYEISKDKRWLTFNDAFQDLLSKGATLISDGENLNISKRLHEEIPANARLFVICDKETYQRLTL
>NZ_CP011058.1|WP_148505237.1|2934777_2938314_+|S-layer-homology-domain-containing-protein
MYTKTGIYTKNEGTTVATYDTLYNNSTAVADSSRNVYSNIFDSPIIHKQAFNLNPSPKAIEYENVDGMIHLNRNITAWAIGENEKYLYAIAPEANRLLQIDTESWTVAADRYVGSKPTDVDIRDGILYISLEGSTHIAKVDTNHETDFMAPITELEVGELTADVAAGTEKVYYTNTGSWGRVSVWQSVYTNYAATYSEPKLTMSPDASSLWIGETDSSGSNLYRMDTASGQIVQHTTGGFYSSTKEILQDDPYVYYAARRFSSSDLSRIYGEYKDGYYYAHLLFAKGNLVIGSTAFYDRDTFNPIYKLPFPIGNGYIKDDGSIILYGGTGLPSENGPFILYKFDSLEDMKSQVEEGMRPKEAEFLDENPDTLRIEGNITFRPGPMDLLVDHYEINYYDISNQRVAATRRDSIYPYQRQPDGSYSYSIWQQTLPPEVNKIGIVPVTRDGIRMEGAKLLIRLWDFPAYFVGNAILTDTDPAPGVIEGKVSFARADDERAGDRYAVYFADENGFLGDPIGSVAASGKPGYELGIPKGTAVPEGAYMLAIQMLDQDGLEAPGYVLTEIPDLMTLAPAAEQITVFNEPPGASDKITVTGLHAGDLVKAYKDNGELYGQVSVATGSTSAVISGLALDENERLLYVTVTTPGKKESFPVYNTYPPFGGTGGGAPVVPAPGGGVPVVPAPVVPEPGVGGPVTPAPGGGAPVTPAPGGGAPVTPAPGGGTPVTPAPGGGTPVTPAPGGGAPVAPAPGGGTPVVPVPGGGTPDGDPGGDTGAQVPQAHESGTVALVKMGKSADGASLAAVTLNDAALDAELKKGSSESNELKLKVSNPADEIQVTLRGDQLTKLMQSKEKAWVHIEADDSGFVLPASALKATGMKIDGEDRVVVSIRKLTEAAAAHKSLDKQSFQAVAPLFDFSIRIKKAAGRLIEINNTAVYLGHIIRFKLSSAPVETLSAVTIDPVTGTVSPVPATFKQEGDIVTATIYRKGNSVYSIVTNKTGFNDLKPSDFARNAIDKMATRMVIRGYTDGSFKPDGSVTRAEFASMLIKALGIVPSAESSAFKDVKKGAWYYDAVSAGVRTGLLKGYTDGNFRPNQTITQQEMAVVLYKALTYGGYEQQSSGTKQLFDTDKGYDAWSEQAVDTLLREGILNKSEPFKIEADKKSTRAESAELLYRVLKTLKMI
>NZ_CP011058.1|WP_045670803.1|2933337_2933832_+|GNAT-family-N-acetyltransferase
MSSAPVVKEYFDAYQAQVVDLILHIQQQEYDIPITKEDQPDLFNIERFYQTGSGNFWVAIHDDKVVGTISLLDIGHHKVALRKMFVAKEYRGPELKTAYRLLQHAIAWAKEKSVKEIYLGTTAQFLAAHRFYEKNGFASIERSELPDRFPVVHVDTVFYKYVVD
>NZ_CP011058.1|WP_045670802.1|2932238_2933309_+|23S-rRNA-(adenine(2503)-C(2))-methyltransferase-RlmN
MKKESIYGLTFDRMEDWLAQRGHKKFRASQVWDWLYRKRVTDFSGMTDVNDQCIQLLTEHFVIQTLDEHVKQQSADGTIKFLFKLQDGNLIETVLMRHKYGLSVCVTTQVGCNIGCSFCASGLLAKSRDLSGGEIVGQIMKVQHHLDQAGEGERVSHVVVMGIGEPFDNFANLSDFIEVIKDHKGLAIGARHITVSTSGLADKMIEFTDSELNVNLAVSLHAPNNELRTRIMKINRAIPLEKLMPAIDYYLSRTNRKITLEYILLKDVNDQKEHALELIELIGDRRDLATVNLIPYNPVDEHSQYQRSGRETILAFYDTLKKHGINCSVRLEHGTDIDAACGQLRSKQIRKDTVLQ
>NZ_CP011058.1|WP_045673264.1|2930730_2931903_-|ABC-transporter-permease
MKNALRMYLKKPQSKIAVIIALMAQLIFCIVWMTAYDGVLDRVNHLKIAIVNENGEFGSNIAKQLQSNLPFEVSTASQEAAMDDLVQRKVHLVLTIPDKFQQSLTTPGMQAHLSYTINESNPQLTKNVMQTIITKVTDELNRNASLQGTEAVLQQLKLPPQQAEQTAISILNKVDSNVKSLNPVNGMHNQMVPMMLVLASYVGAMMMAMNIHQVAESIGSAVSKWHHFAVRVLVIVVAAALISIVGSSLIAALGGQMESGFASFWLFHFLTLFTFMLFAQMFLIVMGMAGMFLNMTVLSLQLVTSGTIVPRQMLSGFYQSLGHYLPATYAVEGIMNLQFGGVHTGEDVEVLFVIIVSTVLLSLLVTALKKQAKPAQTDSAPAAELSAANS
>NZ_CP011058.1|WP_045670801.1|2929866_2930445_-|TetR-family-transcriptional-regulator
MDKNSDVLTKEQILIATEETLRRYGVAKTSVTDVAKALGVSHGTIYRHFKSKAELLEGATQMWLDEKIIAPLTDICHDSSLNGVKHLKTYIRTLIELKRHYAFEDEELFRMYAKVTEEAADLIHTHIGHITDQLSQIITRTGIKTDNPAQLGSSIFFATTRFHHPAHAHEWRSAVIDEEFSDVWDLIEKGFA
>NZ_CP011058.1|WP_052702931.1|2942751_2943342_-|TetR/AcrR-family-transcriptional-regulator
MNRAEQIVSVAHRLMLERGYSAFSYADIADVIGIQKASIHYHFPSKDNLVQKVVQHYRGGVRSNLSQLDSLTDDPRKKLEHYLNYWNACLQDKAIDICLCAQLASEIPILPEEVRGEVQAHFQELTGWIANLLREASEAKQYERSGRSFEEDAAMILAAVHGGMLAARTFNDGTQFQAISSQILDQLNAARSGKEK
>NZ_CP011058.1|WP_045670810.1|2943391_2944627_-|acetate-kinase
MNILVIHSGSSSLHYQLLDMPSEAWIVKGSIERIGTGDALYTSQRRDGAVGMETRELADHDAAVSFLLRVLSDRADGAVQSVHDIHAVGHRIAHGGEFFKSAVLIDGDVKIKIKQLYDLAPLHNPPQMKGVSAVQKYLADTPQVAVFDSAFHQTMPSRAYRYAIPNALYRKHGIRKYGFHGSTHEYVSRRAAGMLNVPLEQLKIVSCHIGNEASCTAVEFGRSVDTSMGMTPLEGLMTGTQSGDLDPAVLLFLMRKEDLTANEISSLLHKHSGLSGISGISGDVPELIAAAGGGNSSAQLALDMYEYRIIKYIGAYAAAMNGIDALVFTGDVGEGCAAMRARICRQLSYAGIRLDDAMNGTGPFGEGEPPAPAEQVISSADSGVSVLVIPADEALLIARKTYELLRERTKN
>NZ_CP011058.1|WP_045670811.1|2944992_2945763_+|formate/nitrite-transporter-family-protein
MGFAKPEQIAQLAVEAGVKKANMPLRSQIPLGFAAGAFIALGFLLAIRVSAALPAEWGGLNSLLGAAVFPLGLILCLAAGGELLTGNMMALPMACYAGKVSVRRWLANWAVITAGNFLGALYIAYLFGHLGGMTEHGPYLARTALLARSKLDEPLGIAFISGIGCNWLVSSAVWMAYGSKDGAGMIAAVWFPTMAFVALGFQHVVANMFLLPAAIMAGQATWLEYARNFVPVYLGNAAGGCLFVAGIYGTAYLKKD
>NZ_CP011058.1|WP_082083753.1|2945785_2946529_-|Crp/Fnr-family-transcriptional-regulator
MRNGQRGTTLIEETAAALNSGIATFFSEENMERLQGVMYAKSARAGSYLFWEGDAADKLYYVKKGQVRITKSADNGRTLTLYLHLQGDLFGQVDPFRDSVHGFNAEVTEDSEIGIIQQKDLEVLLWQHGDLAIEFMKFMGLMHRRTQTKFRDLMMFGKPGALCSLLIRLGNTYGQPGDNGIIIGMKMTNTEMADMIGTTRENVNRMLSDMKKEDVISMEEGHIVIRNLNYLRDICRCESCPKEICRM
>NZ_CP011058.1|WP_045670812.1|2946797_2947250_+|GAF-domain-containing-protein
MNKISTGQWMTQELERLCLSSDSDFGAFAQPVESDRLMRWTCEAGSRNRRISQMTVKPGVGAAGMALRLGRPYIVNGIGNDSAVRECPVMLAEKLLSAVAMPIPALTGHSAGGVLLLGRRSGLNYGEEDVRLLSAHIPGLLETMRAGLQK
>NZ_CP011058.1|WP_045670813.1|2947334_2947988_+|response-regulator-transcription-factor
MIKIIIVDDHAMVRSGLRMLLSGKEDIEVVGEASDGDEGIAAARQLNPDVVLMDLSMPHGKDGLTAASELKTELPGTAVLFLTMHDDDEYLFRAIHAGASGYVLKSAPHEELLTAIRSVAKGDPYLHPNATKRLMKEYTEGLRRGESADLFETLSEREKEVLEMTAKGYANKEIAEQLIISVKTVEAHKSNVMEKLGLKSRPELVKYAVKKGLLQFD
>NZ_CP011058.1|WP_045670814.1|2947980_2949099_+|PAS-domain-S-box-protein
MTKRRKITESEVIGQHVGSLLSKLDDNIADEAFRSELKQSLKQLTDVKFALDESSIVAVTDRSGKIEYVNDKFCEISKYEREELIGQDHRIINSGYHDKPFMQQLWQTILAGDVWFGEIKNRAKDGSYYWVSTTIVPFIGEDGRPYQFLAIRNEVTKLKKVEEQLQEMIGQVMRIQEDERRRFSRELHDGIGQSLFSLLIQIDGVMSAAESGEAQLGPIRETVAGIIEEVRGLAWEMRPSVLDDLGVVPAIRTYIDNYASHYGITVRFDCNLRKRLGVQAETAIYRIIQEALTNIAKYADVSEADVSIKETETEVVVRIADEGAGFDTAAPSKGVGRFSMEERARAAGGSLRIESSASRGTAVTVVIPKSGF
>NZ_CP011058.1|WP_052702932.1|2949076_2950114_-|hypothetical-protein
MTKIGPEAIEHSYMMNVKYVLITLVITANMLEPVISRHAGAMAVYETIYTFHIPMFAFAMGYSAQDYRQEGRASKALTAIAYQYIVFQSLYSLADASLFHAPGVVYSFFMPYSLLWFLCSHFCWRLLLPLFSRMKYALPTAVLLGVAAGYIPWEGGWVSLSRTFVFFPFFLAGFKARNFPRWQAAALRIRPFAVAAGFAVLAVFWLGPHIDPGWLYGSRTFAELGSTQWYAGLQRLGIYVLEAAASICFLACVPWSEGRLTGPGKRTLYVFLLQGFVIKAMLAAGLYDVIENERMAVPLLVAAAVLLALGLSRPQIERAGKRWIEPDFPALIAKLRTRFRTRTSV
>NZ_CP011058.1|WP_158453672.1|2950325_2950481_+|hypothetical-protein
MTVITCKECSRTNGTGSVGTSWICEDCKVEMTEQKQQAERDEWMQERRLEQ
>NZ_CP011058.1|WP_045670815.1|2950660_2951566_+|acetamidase/formamidase-family-protein
MLLLARDTHIFSFSKHHTPVLNVISGSTVKFQTMDCFSNTIHSPDQSVEAIDYSRINPATGPVYIEGAEPGDVIKAEILEIRVAGQGVLASIPGIGTLTHTAESAIKILPIASGQTATFSEHIELDVRPMVGVIGVAPAGADIPCGHPGNHGGNMDATCITSGSSVYLPVNVSGALFALGDLHAAMGDGEICGVGIEVAGEVDVRLSVIKGAELDWPLVHRGNDWYTIASDHDLLTAIRLASESMQRLLVKEWELSNTEAYMLMGAAGDVQVNQACKPCSVESVVRFRMPQMKSLKPLIQE

Crispr_ID: NZ_CP011058_9

• CRISPR_ID: NZ_CP011058_9
• CRISPR_location: 3152083-3152155
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP011058_9

Consensus_repeat	Method
TAAGAGCTGTGAGTTCCGTTAGA	CRISPRCasFinder

spacers of NZ_CP011058_9

>9.1|3152106|27|NZ_CP011058|CRISPRCasFinder
TTTCCAAATGGGCTCATAAATGCAAAA

CRISPR arrays and Neighbor proteins around NZ_CP011058_9

CRISPR arrays

The CRISPR arrays of NZ_CP011058_9

>merge|NZ_CP011058|9|3152083-3152155|CRISPRCasFinder
TAAGAGCTGTGAGTTCCGTTAGATTTCCAAATGGGCTCATAAATGCAAAATTAGAGCTGTGAGTTCCGTTAGA

>NZ_CP011058|9|7|3152083-3152155|CRISPRCasFinder
TAAGAGCTGTGAGTTCCGTTAGA	TTTCCAAATGGGCTCATAAATGCAAAA
TTAGAGCTGTGAGTTCCGTTAGA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011058.1|WP_045670944.1|3147827_3148877_+|cytochrome-c-oxidase-subunit-II	unknown	unknown	gnl|CDD|224537
NZ_CP011058.1|WP_045670939.1|3142473_3143478_+|globin-coupled-sensor-protein	unknown	unknown	gnl|CDD|381256
NZ_CP011058.1|WP_045670951.1|3156541_3156937_+|GntR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|224639
NZ_CP011058.1|WP_045673303.1|3141475_3142258_+|esterase-family-protein	unknown	unknown	gnl|CDD|223700
NZ_CP011058.1|WP_045670952.1|3157099_3158068_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224054
NZ_CP011058.1|WP_045670949.1|3153716_3154181_+|DUF420-domain-containing-protein	unknown	unknown	gnl|CDD|377257
NZ_CP011058.1|WP_045670948.1|3152783_3153689_+|cytochrome-c-oxidase-assembly-factor-CtaG	unknown	unknown	gnl|CDD|131784
NZ_CP011058.1|WP_045670940.1|3143658_3144138_-|C40-family-peptidase	unknown	unknown	gnl|CDD|366353
NZ_CP011058.1|WP_045670953.1|3158269_3159172_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|226631
NZ_CP011058.1|WP_045670943.1|3146665_3147442_-|ABC-2-family-transporter-protein	unknown	unknown	gnl|CDD|226953
NZ_CP011058.1|WP_045670956.1|3162066_3162897_+|enoyl-CoA-hydratase/isomerase-family-protein	unknown	unknown	gnl|CDD|119339
NZ_CP011058.1|WP_045670955.1|3160769_3161870_+|nitronate-monooxygenase	unknown	unknown	gnl|CDD|367316
NZ_CP011058.1|WP_045670942.1|3145877_3146669_-|ABC-2-family-transporter-protein	unknown	unknown	gnl|CDD|226218
NZ_CP011058.1|WP_148505243.1|3155792_3156524_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP011058.1|WP_052702960.1|3154370_3155465_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP011058.1|WP_045670946.1|3150793_3151414_+|cytochrome-(ubi)quinol-oxidase-subunit-III	unknown	unknown	gnl|CDD|239214
NZ_CP011058.1|WP_045670945.1|3148907_3150797_+|cytochrome-c-oxidase-subunit-I	unknown	unknown	gnl|CDD|238832
NZ_CP011058.1|WP_045670954.1|3159164_3160490_+|ABC-transporter-permease	unknown	unknown	gnl|CDD|224582
NZ_CP011058.1|WP_045670947.1|3151418_3151739_+|cytochrome-C-oxidase-subunit-IV-family-protein	unknown	unknown	gnl|CDD|131954
NZ_CP011058.1|WP_045670941.1|3144378_3145404_-|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl|CDD|213234

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP011058.1|WP_045670944.1|3147827_3148877_+|cytochrome-c-oxidase-subunit-II	gnl|CDD|224537	COG1622, CyoA, Heme/copper-type cytochrome/quinol oxidases, subunit 2 [Energy production and conversion].	2.9705e-76
NZ_CP011058.1|WP_045670939.1|3142473_3143478_+|globin-coupled-sensor-protein	gnl|CDD|381256	cd01068, globin_sensor, Globin sensor domain of globin-coupled-sensors (GCSs), protoglobins (Pgbs), and sensor single-domain globins (SSDgbs); S family. This family includes sensor domains which binds porphyrins, and other non-heme cofactors. GCSs have an N-terminal sensor domain coupled to a functional domain. For heme-bound oxygen sensing/binding globin domains, O2 binds to/dissociates from the heme iron complex inducing a structural change in the sensor domain, which is then transduced to the functional domain, switching on (or off) the function of the latter. Functional domains include DGC/GGDEF, EAL, histidine kinase, MCP, PAS, and GAF domains. Characterized members include Bacillus subtilis heme-based aerotaxis transducer (HemAT-Bs) which has a sensor domain coupled to an MCP domain. HemAT-Bs mediates an aerophilic response, and may control the movement direction of bacteria and archaea. Its MCP domain interacts with the CheA histidine kinase, a component of the CheA/CheY signal transduction system that regulates the rotational direction of flagellar motors. Another GCS having the sensor domain coupled to an MCP domain is Caulobacter crescentus McpB. McpB is encoded by a gene which lies adjacent to the major chemotaxis operon. Like McpA (encoded on this operon), McpB has three potential methylation sites, a C-terminal CheBR docking motif, and a motif needed for proteolysis via a ClpX-dependent pathway during the swarmer-to-stalked cell transition. Also included is Geobacter sulfurreducens GCS, a GCS of unknown function, in which the sensor domain is coupled to a transmembrane signal-transduction domain. Pgbs are single-domain globins of unknown function. Methanosarcina acetivorans Pgbs is dimeric and has an N-terminal extension, which together with other Pgb-specific loops, buries the heme within the protein; small ligand molecules gain access to the heme via two orthogonal apolar tunnels. Pgbs and other single-domain globins can function as sensors, when coupled to an appropriate regulator domain.	2.08475e-42
NZ_CP011058.1|WP_045670951.1|3156541_3156937_+|GntR-family-transcriptional-regulator	gnl|CDD|224639	COG1725, COG1725, Predicted transcriptional regulators [Transcription].	5.07038e-28
NZ_CP011058.1|WP_045673303.1|3141475_3142258_+|esterase-family-protein	gnl|CDD|223700	COG0627, COG0627, Predicted esterase [General function prediction only].	5.26015e-49
NZ_CP011058.1|WP_045670952.1|3157099_3158068_+|ABC-transporter-ATP-binding-protein	gnl|CDD|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	7.13814e-55
NZ_CP011058.1|WP_045670949.1|3153716_3154181_+|DUF420-domain-containing-protein	gnl|CDD|377257	pfam04238, DUF420, Protein of unknown function (DUF420). Predicted membrane protein with four transmembrane helices.	3.79211e-40
NZ_CP011058.1|WP_045670948.1|3152783_3153689_+|cytochrome-c-oxidase-assembly-factor-CtaG	gnl|CDD|131784	TIGR02737, Protein_CtaG, cytochrome c oxidase assembly factor CtaG. Members of this family are the CtaG protein required for assembly of active cytochrome c oxidase of the caa3 type, as in Bacillus subtilis.	8.78323e-101
NZ_CP011058.1|WP_045670940.1|3143658_3144138_-|C40-family-peptidase	gnl|CDD|366353	pfam00877, NLPC_P60, NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins.	1.05757e-32
NZ_CP011058.1|WP_045670953.1|3158269_3159172_+|ABC-transporter-ATP-binding-protein	gnl|CDD|226631	COG4152, COG4152, ABC-type uncharacterized transport system, ATPase component [General function prediction only].	1.88282e-132
NZ_CP011058.1|WP_045670943.1|3146665_3147442_-|ABC-2-family-transporter-protein	gnl|CDD|226953	COG4587, COG4587, ABC-type uncharacterized transport system, permease component [General function prediction only].	5.02359e-17
NZ_CP011058.1|WP_045670956.1|3162066_3162897_+|enoyl-CoA-hydratase/isomerase-family-protein	gnl|CDD|119339	cd06558, crotonase-like, Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. Many of these play important roles in fatty acid metabolism. In addition to a conserved structural core and the formation of trimers (or dimers of trimers), a common feature in this superfamily is the stabilization of an enolate anion intermediate derived from an acyl-CoA substrate. This is accomplished by two conserved backbone NH groups in active sites that form an oxyanion hole.	4.89331e-71
NZ_CP011058.1|WP_045670955.1|3160769_3161870_+|nitronate-monooxygenase	gnl|CDD|367316	pfam03060, NMO, Nitronate monooxygenase. Nitronate monooxygenase (NMO), formerly referred to as 2-nitropropane dioxygenase (NPD) (EC:1.13.11.32), is an FMN-dependent enzyme that uses molecular oxygen to oxidize (anionic) alkyl nitronates and, in the case of the enzyme from Neurospora crassa, (neutral) nitroalkanes to the corresponding carbonyl compounds and nitrite. Previously classified as 2-nitropropane dioxygenase, but it is now recognized that this was the result of the slow ionization of nitroalkanes to their nitronate (anionic) forms. The enzymes from the fungus Neurospora crassa and the yeast Williopsis saturnus var. mrakii (formerly classified as Hansenula mrakii) contain non-covalently bound FMN as the cofactor. Active towards linear alkyl nitronates of lengths between 2 and 6 carbon atoms and, with lower activity, towards propyl-2-nitronate. The enzyme from N. crassa can also utilize neutral nitroalkanes, but with lower activity. One atom of oxygen is incorporated into the carbonyl group of the aldehyde product. The reaction appears to involve the formation of an enzyme-bound nitronate radical and an a-peroxynitroethane species, which then decomposes, either in the active site of the enzyme or after release, to acetaldehyde and nitrite.	2.73286e-106
NZ_CP011058.1|WP_045670942.1|3145877_3146669_-|ABC-2-family-transporter-protein	gnl|CDD|226218	COG3694, COG3694, ABC-type uncharacterized transport system, permease component [General function prediction only].	4.57984e-37
NZ_CP011058.1|WP_045670946.1|3150793_3151414_+|cytochrome-(ubi)quinol-oxidase-subunit-III	gnl|CDD|239214	cd02863, Ubiquinol_oxidase_III, Ubiquinol oxidase subunit III subfamily. Ubiquinol oxidase, the terminal oxidase in the respiratory chains of aerobic bacteria, is a multi-chain transmembrane protein located in the cell membrane. It catalyzes the reduction of O2 and simultaneously pumps protons across the membrane. Ubiquinol oxidases feature four subunits in contrast to the 13 subunit bovine cytochrome c oxidase (CcO). Subunits I, II, and III of bovine CcO are encoded within the mitochondrial genome and the remaining 10 subunits are encoded within the nuclear genome. Subunits I, II and III of ubiquinol oxidase are homologous to the corresponding subunits in bovine CcO. Although not required for catalytic activity, subunit III appears to be involved in assembly of the multimer complex.	1.02804e-81
NZ_CP011058.1|WP_045670945.1|3148907_3150797_+|cytochrome-c-oxidase-subunit-I	gnl|CDD|238832	cd01662, Ubiquinol_Oxidase_I, Ubiquinol oxidase subunit I. Ubiquinol oxidase, the terminal oxidase in the respiratory chains of aerobic bacteria, is a multi-chain transmembrane protein located in the cell membrane. It catalyzes the reduction of O2 and simultaneously pumps protons across the membrane. The number of subunits in ubiquinol oxidase varies from two to five. Subunit I contains a heme-copper binuclear center (the active site where O2 is reduced to water) formed by a high-spin heme and a copper ion. It also contains a low-spin heme, believed to participate in the transfer of electrons from ubiquinol to the binuclear center. For every reduction of an O2 molecule, eight protons are taken from the inside aqueous compartment and four electrons are taken from ubiquinol on the opposite side of the membrane. The four electrons and four of the protons are used in the reduction of O2; the four remaining protons are pumped across the membrane. This charge separation of four charges contributes to the electrochemical gradient used for ATP synthesis. Two proton channels, the D-pathway and K-pathway, leading to the binuclear center have been identified in subunit I. It is generally believed that the channels contain water molecules that act as 'proton wires' to transfer the protons. A well-defined pathway for the transfer of pumped protons beyond the binuclear center has not been identified. Electrons are believed to be transferred directly from ubiquinol (the electron donor) to the low-spin heme, and directly from the low-spin heme to the binuclear center.	0
NZ_CP011058.1|WP_045670954.1|3159164_3160490_+|ABC-transporter-permease	gnl|CDD|224582	COG1668, NatB, ABC-type Na+ efflux pump, permease component [Energy production and conversion / Inorganic ion transport and metabolism].	8.73964e-45
NZ_CP011058.1|WP_045670947.1|3151418_3151739_+|cytochrome-C-oxidase-subunit-IV-family-protein	gnl|CDD|131954	TIGR02908, Cytochrome_c_oxidase_subunit_4B, cytochrome c oxidase, subunit IVB. This model represents a small clade of cytochrome oxidase subunit IV's found in the Bacilli. [Energy metabolism, Electron transport].	2.434e-19
NZ_CP011058.1|WP_045670941.1|3144378_3145404_-|ATP-binding-cassette-domain-containing-protein	gnl|CDD|213234	cd03267, ABC_NatA_like, ATP-binding cassette domain of an uncharacterized transporter similar in sequence to NatA. NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the proton-motive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunorubicin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single integral membrane protein.	8.36133e-122

Protein sequences

>NZ_CP011058.1|WP_045670947.1|3151418_3151739_+|cytochrome-C-oxidase-subunit-IV-family-protein
MAGSEYSESPKPGKRYRHEGPRKHIIAYFFSILLTLIAFATVIAGEINTSFVYILLIVMAILQVIIQMSFWMHMKDRGHLFPIIGILGGVFVAFTLVVTAEYWTWW
>NZ_CP011058.1|WP_045670946.1|3150793_3151414_+|cytochrome-(ubi)quinol-oxidase-subunit-III
MSAHPHPEGKLPHEPERATLEGRNKVLGFWLFLGGETVLFGTLFSTFLALRGQVGEGNPTSHELFNLAMVAVATLILLTSSLTSVFAIQAMHKERVKAMIGWLIVTVVFGLLFLGLEIYEFAEYAAEGHRFSTSAFSSSFYTLVGFHGAHVAFGVIWISILVGQIVKKGLTVVTAPKIYVAGMYWHFIDVVWVFIFTVVYLMGKVG
>NZ_CP011058.1|WP_045670945.1|3148907_3150797_+|cytochrome-c-oxidase-subunit-I
MAHEVPVKRYRGLMDWLTTVDHKKIGILYLIAGGFFFLVGGFEALLIRIQLWKPMNDFVGADNYNELLTMHGTTMIFLAAMPMLFALMNAIVPLQIGARDVAFPFVNALGFWTFFFGGLLLNLSWFTGGAPDAGWTSYLPLAGPTYNLDHGVDYYVIGLQIAGIGTLIGGINFLVTIINMRAPGMTFMRMPMFTWTAFITSALILFAFPALTVGLVALMFDRLFQANFFEAAGGGNAVLWEHIFWIFGHPEVYILILPAFGVISEVVSTFSRKRLFGYSTMVFATVLIGFLGFMVWVHHMFTTGLGPVANALFSIATMLIAVPTGIKIFNWIFTLWGGSIRFTTANLFAVGFVPTFVMGGVTGVMLAAAPADFQYHDSYFVVAHFHYVIVGGLILGIFAGLHYWWPKMFGRMLSERLGKLTFWTFFIGFHLTFFVQHFLGLLGMPRRVYTYLDGYDFNELNLISTIGAFLMAFGTICFLVNIVVSFRKPADAADDPWEDGRTLEWSIPSPAPEYNFAQTPLVRGYDALWKEKMEGHGTMSPAEPAGPIHMPSPSILPLLMSVGLFISGLGFMYADNDWPNPFFSQLFGTHIVAVLGLAVTLGCMLIRSLKDDPGFHIDPEEPQLKGVKA
>NZ_CP011058.1|WP_045670944.1|3147827_3148877_+|cytochrome-c-oxidase-subunit-II
MMNRWHAAKRLWPMLTAMALLLSACGRADISALNPQGPVAEEQFDLMKLAILIMIVVVVIVFVLSFYVIVRYRRRPGDKSIPVQVEGNHKLEIIWTVIPLILLFILAVPTVKSVFGLATDYTKDNNAVQVIVTAHQYWWEFEYPQYGIKTAQQLMIPTGKTISAQVKSADVIHSFWIPSLAGKIDANPGSNVNTMYFSAPEEGVYMGKCAELCGPSHALMDFKVTAVDEASFERWVEAMKQPAVMPADPNVAAVFENQCLSCHAVGDKGSPLYPNLTGIGDRSTVAGILTNTDDPKYSNEGTTYDNLKRWISDPQAVKPGNIMPKVGLTEEEIDGIAKYLSEYKLDEKP
>NZ_CP011058.1|WP_045670943.1|3146665_3147442_-|ABC-2-family-transporter-protein
MLFLVLARKTFDRNLQYRSAHMIHNIASALFGFIYMSVWRGIAEGRSLGEYGTAGILSYVAFNQCILWITSFQTNGLGLPQAVRTGAIALELMRPVHLFYQLICRESGQIAYQFLYKFLPIYAVYFFALPIRVPQTAAAWLWTSLALLLAAYISLCIQFLIGAAALWTTESTWMYWSNYALSTLLSGFLIPVEWLPGPLAMISRFSFYPYLQYVPSRIYLEMDGPERLIGALIWCVCLTAVCVAATAIMRRKVEVQGG
>NZ_CP011058.1|WP_045670942.1|3145877_3146669_-|ABC-2-family-transporter-protein
MSWLRMYVLLVRASVRSRMQYRFNFWFSVMMAAVINAVDFALLAVILLRFGGIKGWSLAEAGYLYGVLTAAKAIYRSLASDVHHLERYLVSGDLDALLLRPVPVLLALMSQNFHLRVGELLLGGGILALSLHSLLEADQVTWSILPWTLLVIGSGSVLLFAIGLLTASAGFWITRIETLQNITEDAARTAAQYPLTIYPSWLKILFIGVIPIAFANYLPALYLLRHETGWWMPLLAACVALLLLAIAVKVWRIGISRYQSTGS
>NZ_CP011058.1|WP_045670941.1|3144378_3145404_-|ATP-binding-cassette-domain-containing-protein
MIQATALSKQFRTSVRADGPFKSVRSLFSRNYTIREAVHDVSFTIAPGEFVGYIGPNGAGKSTTVKMLSGILHPTSGDVSIDGLSPYRDRRKVARRLGVLFGQRSQLWWDLPVRDSFEILAAMYDISKSDASARLDRLGSMLQLGDFMDTPVRKLSLGQRMRADIAAALLHNPGILFLDEPTIGLDVTAKRSIRTFLQQINKELGTTVLLTTHDMDDIEQLCSRVMVLNGGRLKFDGNIGQLRAMIGLPTLMTVTYRTAPAAFGDTGQAEYPRDDAPRAITETLLAKGLRLQDVSGNSLTVEFNRERCSAMDALRILELYGDVDDVHMEEPNFEDIVHRIY
>NZ_CP011058.1|WP_045670940.1|3143658_3144138_-|C40-family-peptidase
MTNHKGLKRLFTAVVLTFVISLGGTTVLPFETVQVASAASKSSRVVSAAKQYLGTPYKFGASTKTTRVFDCSSFTKRVYGKVGITLPRTSIKQSKVGRYVSKSNLRVGDLVFFYSPIHHVGIYIGGGKIIHTYGKPGVTISTIKSGWWKKHYKTARRVL
>NZ_CP011058.1|WP_045670939.1|3142473_3143478_+|globin-coupled-sensor-protein
MIDISAQRQDQLEFIGLSDNDLNLLASHKTTFETIADEVMERFYQSIRRRPDLMGIIDRNSNVDRLKMMQKQYFLSLADGVIDSAYIDNRIQIGLIHSKVGLTADYYLGTYMIYLDIASDLLRRIIPESWIQVLHALTKMFNFDSQLVLEAYTRKEKEELETLSANQRHLLESITGVAQNLTGMITQLTDSAGFIAETARTTAASQDKSHRLLDELNEEVRKIEDMSVLVREISDRTHLLGLNAAIEAAHAGEMGRGFEVVAGEVRKLAASSREALEQVAGTIEGITGKLESVRMESEATSNNATQQALRSEELSAFVGLICSVANDLEQLQRR
>NZ_CP011058.1|WP_045673303.1|3141475_3142258_+|esterase-family-protein
MALIQCDYYSETLGLSCSMNVILPQQTFSQIGMGGKTRGGKHPVLYLLHGLSDDHSIWLRRTSIERYAAELGLAVVMPAVHRSFYMDMEQGGRYWTFISEELPAIARSFFPLSEAREDNFAAGLSMGGYGAFKLGLRCPDKFAAAASLSGALDPAVITDRLHGFDREFALIFGSADKIRGSDNDLFHLAQLVAEGGGTVPKLYQCCGTEDFLYEDNVRFRDNAQGLGLPLTYEEEPGDHEWGYWDDKIRRVLKWLPLRSK
>NZ_CP011058.1|WP_045670948.1|3152783_3153689_+|cytochrome-c-oxidase-assembly-factor-CtaG
MLGLQYFGFEALWSPPLLFGAIALVIGYYYLIGPWRLKRFPEEARATALQQTMFGSGVALLYAAQGGPLNLLGHLMFTFHMLDMSLSYLIAPPLVLLGVPGYIWRFVFSHRGWRPFRWLTHPILTLVAFNMLFSIYHVPLVHDYVMTHFTLHRLFYLVLLVAAFLMWWQITCPVPEWNRLNGLRKMAFVFASGMLLTPACALIIFAGSPMYAVYNDPQVWAKAMGYCVSGDPSQLLKTLGGPSVFSLFSPLEDQQLGGIVMKLIQEVMFGAILAYVFFHWYKKEHADSDTDLPNAGQAGAP
>NZ_CP011058.1|WP_045670949.1|3153716_3154181_+|DUF420-domain-containing-protein
MSIYTLFPTISTSFIVISAILVAIGWRLAIRRRLDEHKKVMIAAAVAAIIFFIIYASRTILVGNTEWGGPDNLEKYYVFFLVFHIILATVAAVFGITTLVLGFREKFAKHRKWGRTTSVIWFFTAITGVAVYVLLYVMYPGGHTKPMIDAIFGL
>NZ_CP011058.1|WP_052702960.1|3154370_3155465_+|hypothetical-protein
MLSKGKRKLGFAAFAMLLVVALMLGGCSTASKSPKETLMDATGKTAELKSYAFTGSVKLEELNVPEEMATDLNTSMMLGMLQNAEISWTGAYRLDPMLTEMNMKIITSGDMALTINTTMIMNQDKLWIKVPNIPMLASFIPQSLVGKFVEFDMKELAKEQGTEMPQLDVAKSQQFVNDVSGIVFKHIDEKTYLKSVKPKEAGIPDDAGADKAVQVHVTRDQVEPLAQTVVKNILPEIFDLLSKNEEYRNMLQLTQADLDDARKEVTQTSDEELKKGIEEFNKTVTALDVTSNIGIDKEGYAHYSNTLVKMEMNDNGQTGSGTLRFLSQMTNINGDVKFETGEPKDAVTMEQLQQAINEQMTGGL
>NZ_CP011058.1|WP_148505243.1|3155792_3156524_+|hypothetical-protein
MGVWRGAWCLVRYEWSRGWAGVLATLLFATYMVFTTLPLFNYAGELDQGYRVVIWAGDFSMLVVLPCLGFLMNRTTLRYLREDYVTRRIAYWRTLPITNRHIAAARLIMMMTVLVPLWLYFFTLEYIVAKGLRSMLTVPEFTGYALFWLGYAVIVSVTYAYWEVGYSGRTFFIICFVYVGLFVAVSCIVAMNGGSIIFAAAGQFRSGHWWLAGLSLAAGAAALALGSGMIRRRLETRSLTNER
>NZ_CP011058.1|WP_045670951.1|3156541_3156937_+|GntR-family-transcriptional-regulator
MWLPIELNEHSAEPLYRQIETQLRALIISGRLAEDTLLPSIRELAQMLKCSVITVRRVYQDLENEGLLRTRQGTGTFVAAVDTDIRDRQRLESVTAAFAAAVEAGLRVKCSEEEMTDIFQRVMKERMGLER
>NZ_CP011058.1|WP_045670952.1|3157099_3158068_+|ABC-transporter-ATP-binding-protein
MRDNLAIHIEGVVQRRDRFKLGPLSLQVPQGCVTAIVGPNGSGKSSTFKLLLGLSKPDEGYLTMLGQRVDASDDAVLKRRIGYLSEEPFHQEDGMRGRQKADFVRQWYPDWNEILFNKLLSVFEVDPSLKLRRMSKGMRRKFELALIMAHEPELLLLDEPSSGLDPLAWKAMIDVFHRYMEPGTRTIVMATHIVEEVRRLADYIVFMHAGRVLGMYEKDELFSSWSRFFVETGSGLTAASGCAAAASEIPGGCQAEDAGGGVISLSTARPMEAERWLTEQGWTIRARRPMELDDIMEALIERDCREKRVPQGAGSPHRSGAG
>NZ_CP011058.1|WP_045670953.1|3158269_3159172_+|ABC-transporter-ATP-binding-protein
MKPLIVDQITKQYGDKTAVNGISFEVEQGEIYGLLGANGAGKTTTMRMVLGLIFPDEGKVLYNGKPYGKEQLRMLGYLPEERGLYPKVKVSEQLLYLAKLRGMTAKDADSSLKRWLERFEVPEYYNKRVEELSKGNQQKIQFIASIIHNPRIVILDEAFSGLDPVNVELLKATVKELRDNGTTILFSTHRMEHVEELCRNITILHRSNAVLKGSLKEIKKSFPRERVLLAADGDVSGLDALPGVRRVQRHEYGYEIFIENESAARGILEYAMAQGGVDRFQVMEPTLNEIFIKTVGDTRE
>NZ_CP011058.1|WP_045670954.1|3159164_3160490_+|ABC-transporter-permease
MNELLTVIGFTVRSKIKGKAFIVTTLIIAIILSVGINLPYIISQFNSGPGKATPVGYINGAAASQAGGYSESELGGALKKYFETKEEQDVEMVPIDDSGSAAGNETLLKQAVRDGKIKGYLTFSDNGSGFPAVTYNSEKVMESSVSGALKTALQDVKLESVLAQSGLTEAQRALLFSPVSVDSVQISAEGGAGSVGSGRSETEQGVNMGVVYIVIVLLFMTLMGTGNVIASEITMEKSSRVMEVLITSVAPLKQMFGKIIGMLIIGISQIAVYVIVLVLNMMLPTNKDAWASFDISLSDISPALLLYSLLLYVLGYFLYATLYAAVGSLVSRTEDLGQAVMPITFVALAAFYISIFSISRPDSMLVLVSSFIPFFTPFAMVLRIGVGDPPLWHVWVAIAELLAAIYLFGWLSAKIYRTGVLMYGKRPSIKELRKAMKAYKI
>NZ_CP011058.1|WP_045670955.1|3160769_3161870_+|nitronate-monooxygenase
MLKTELTHTLKIRYPIFQAPMAGGPTTPDLIAAVSNAGGLGNLGAGYLTPEQLRSTIQEIRQLTDRPFGVNLFVPEQPIESEETIRQMTDHLNKYRVKLGIAQNPLIQKISDSFEEQVQVLLEENIPVFSFTFGIPPQDVIQAMKQRGTVVIGTATTVEEAKQLEVAGVDAIVAQGSEAGGHRGTFLNNIVDSQIGTLALVPQIVDHVSIPVIASGGIMDGRGLVASLTLGAAAVQMGTAFLACPESGAHAAHKQKILSENEDTTVITRAYSGKVARGIRTEFMNDMHHYPGTIPSYPIQHEMTKDIRQAAAKANNPEYMSLWAGQGLRLASDDNAAAIVKRTINEASVLVKRISILGMVDDLGSS
>NZ_CP011058.1|WP_045670956.1|3162066_3162897_+|enoyl-CoA-hydratase/isomerase-family-protein
MAESNSNLYENVIVELEEDIGIITLNRPMQSNSINRQLTSELWDALDRLEHNPNIKVVILTGSNQTFSAGADIKEMYEKISPFDTEPSEMWRAHLESLLKVSLKIWDLKKPVIAAVDGYALGGAADWVLSCDMAIASDTAKIGEPEIKFGAAPPTLMMPWIVGLRKAKELLFTGDIIDASEAYRIGIFNKVVPQSELLSEAIILAKKVTKVSPSALKITKATINKTFEMMNLKQSLEYNLEAGIAMFFLRKEEDFMEINRIIKEEGLKAFLKSMNS

Crispr_ID: NZ_CP011058_10

• CRISPR_ID: NZ_CP011058_10
• CRISPR_location: 3225089-3225450
• CRISPR_type: TypeI
• Repeat_type: I-C
• Spacer_info: 5 spacers
• Cas_protein_info: cas3,cas5,cas8c,cas7,cas4,cas1,cas2

Consensus repeat of NZ_CP011058_10

Consensus_repeat	Method
GTTTCAATCCACGCTCCCGCATGGGGAGCGAC	PILER-CR
GTTTCAATCCACGCTCCCGCATGGGGAGCGAC	CRISPRCasFinder
GTTTCAATCCACGCTCCCGCATGGGGAGCGAC	CRT

spacers of NZ_CP011058_10

>10.1|3225121|33|NZ_CP011058|PILER-CR,CRISPRCasFinder,CRT
ACAGCCGGAGAGTAATTTTGTCTTCCGTATGCA
>10.2|3225186|36|NZ_CP011058|PILER-CR,CRISPRCasFinder,CRT
CGCTTCGGCTGGGGAAGTGCCTGTTGCCATTACGAC
>10.3|3225254|34|NZ_CP011058|PILER-CR,CRISPRCasFinder,CRT
TGCGCGTTTAAGGACCGAAAGGGAAGCGTTAGAG
>10.4|3225320|34|NZ_CP011058|PILER-CR,CRISPRCasFinder,CRT
ACTCCACCTGATGAGCATGCAGGTTTTTAAATTC
>10.5|3225386|33|NZ_CP011058|PILER-CR,CRISPRCasFinder,CRT
TAAAGTAGAAAGATATACGTCACGACCTGGGAC

CRISPR arrays and Neighbor proteins around NZ_CP011058_10

CRISPR arrays

The CRISPR arrays of NZ_CP011058_10

>merge|NZ_CP011058|10|3225089-3225450|PILER-CR,CRISPRCasFinder,CRT
GTTTCAATCCACACTCCCGCGTGGGGAGCGACACAGCCGGAGAGTAATTTTGTCTTCCGTATGCAGTTTCAATCCACGCTCCCGCATGGGGAGCGACCGCTTCGGCTGGGGAAGTGCCTGTTGCCATTACGACGTTTCAATCCACGCTCCCGCATGGGGAGCGACTGCGCGTTTAAGGACCGAAAGGGAAGCGTTAGAGGTTTCAATCCACGCTCCCGCATGGGGAGCGACACTCCACCTGATGAGCATGCAGGTTTTTAAATTCGTTTCAATCCACGCTCCCGCATGGGGAGCGACTAAAGTAGAAAGATATACGTCACGACCTGGGACGTTTCAATCCACGCTCCCGCATGGGGAGCGAC

>NZ_CP011058|10|3|3225089-3225450|PILER-CR
GTTTCAATCCACACTCCCGCGTGGGGAGCGAC	ACAGCCGGAGAGTAATTTTGTCTTCCGTATGCA
GTTTCAATCCACGCTCCCGCATGGGGAGCGAC	CGCTTCGGCTGGGGAAGTGCCTGTTGCCATTACGAC
GTTTCAATCCACGCTCCCGCATGGGGAGCGAC	TGCGCGTTTAAGGACCGAAAGGGAAGCGTTAGAG
GTTTCAATCCACGCTCCCGCATGGGGAGCGAC	ACTCCACCTGATGAGCATGCAGGTTTTTAAATTC
GTTTCAATCCACGCTCCCGCATGGGGAGCGAC	TAAAGTAGAAAGATATACGTCACGACCTGGGAC
GTTTCAATCCACGCTCCCGCATGGGGAGCGAC

>NZ_CP011058|10|8|3225089-3225450|CRISPRCasFinder
GTTTCAATCCACACTCCCGCGTGGGGAGCGAC	ACAGCCGGAGAGTAATTTTGTCTTCCGTATGCA
GTTTCAATCCACGCTCCCGCATGGGGAGCGAC	CGCTTCGGCTGGGGAAGTGCCTGTTGCCATTACGAC
GTTTCAATCCACGCTCCCGCATGGGGAGCGAC	TGCGCGTTTAAGGACCGAAAGGGAAGCGTTAGAG
GTTTCAATCCACGCTCCCGCATGGGGAGCGAC	ACTCCACCTGATGAGCATGCAGGTTTTTAAATTC
GTTTCAATCCACGCTCCCGCATGGGGAGCGAC	TAAAGTAGAAAGATATACGTCACGACCTGGGAC
GTTTCAATCCACGCTCCCGCATGGGGAGCGAC

>NZ_CP011058|10|1|3225089-3225450|CRT
GTTTCAATCCACACTCCCGCGTGGGGAGCGAC	ACAGCCGGAGAGTAATTTTGTCTTCCGTATGCA
GTTTCAATCCACGCTCCCGCATGGGGAGCGAC	CGCTTCGGCTGGGGAAGTGCCTGTTGCCATTACGAC
GTTTCAATCCACGCTCCCGCATGGGGAGCGAC	TGCGCGTTTAAGGACCGAAAGGGAAGCGTTAGAG
GTTTCAATCCACGCTCCCGCATGGGGAGCGAC	ACTCCACCTGATGAGCATGCAGGTTTTTAAATTC
GTTTCAATCCACGCTCCCGCATGGGGAGCGAC	TAAAGTAGAAAGATATACGTCACGACCTGGGAC
GTTTCAATCCACGCTCCCGCATGGGGAGCGAC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011058.1|WP_045673315.1|3216179_3217325_-|ROK-family-transcriptional-regulator	unknown	unknown	gnl|CDD|224851
NZ_CP011058.1|WP_045670988.1|3217658_3218999_+|extracellular-solute-binding-protein	unknown	unknown	gnl|CDD|270453
NZ_CP011058.1|WP_045671003.1|3242595_3243519_+|sugar-ABC-transporter-permease	unknown	unknown	gnl|CDD|224096
NZ_CP011058.1|WP_045670993.1|3227366_3229796_+|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl|CDD|224124
NZ_CP011058.1|WP_045670987.1|3213216_3214212_+|D-cysteine-desulfhydrase-family-protein	unknown	unknown	gnl|CDD|179673
NZ_CP011058.1|WP_045670986.1|3212528_3212993_+|FixH-family-protein	unknown	unknown	gnl|CDD|379037
NZ_CP011058.1|WP_045671001.1|3239635_3240547_-|N-acetylmuramic-acid-6-phosphate-etherase	unknown	unknown	gnl|CDD|235467
NZ_CP011058.1|WP_045671002.1|3241028_3242432_+|extracellular-solute-binding-protein	unknown	unknown	gnl|CDD|270303
NZ_CP011058.1|WP_045670996.1|3232548_3233409_+|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	COG3649_cas7_CAS-I-C	gnl|CDD|187820
NZ_CP011058.1|WP_052702968.1|3219063_3220002_+|sugar-ABC-transporter-permease	unknown	unknown	gnl|CDD|224096
NZ_CP011058.1|WP_158453676.1|3220881_3222084_+|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|379240
NZ_CP011058.1|WP_045670994.1|3229918_3230638_+|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09752_cas5_CAS-I-C	gnl|CDD|273847
NZ_CP011058.1|WP_045670998.1|3234054_3235086_+|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl|CDD|188360
NZ_CP011058.1|WP_045670991.1|3222130_3223120_+|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl|CDD|223745
NZ_CP011058.1|WP_045673318.1|3235096_3235387_+|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl|CDD|187856
NZ_CP011058.1|WP_052702967.1|3214467_3215703_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP011058.1|WP_045670989.1|3220021_3220861_+|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl|CDD|223472
NZ_CP011058.1|WP_045673317.1|3223233_3224211_+|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl|CDD|223745
NZ_CP011058.1|WP_045670997.1|3233398_3234058_+|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl|CDD|273040
NZ_CP011058.1|WP_045670995.1|3230634_3232533_+|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	pfam09709_cas8c_CAS-I-C	gnl|CDD|187887

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_CP011058.1|WP_045670996.1|3232548_3233409_+|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	COG3649_cas7_CAS-I-C	3e-122	402.1	0.1
NZ_CP011058.1|WP_045670998.1|3234054_3235086_+|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	3e-145	478.3	0.0
NZ_CP011058.1|WP_045670994.1|3229918_3230638_+|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09752_cas5_CAS-I-C	1.9e-60	198.8	0.0
NZ_CP011058.1|WP_045670993.1|3227366_3229796_+|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	1e-90	299.8	14.8
NZ_CP011058.1|WP_045673318.1|3235096_3235387_+|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	2.2e-29	96.3	2.1
NZ_CP011058.1|WP_045670995.1|3230634_3232533_+|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	pfam09709_cas8c_CAS-I-C	6.3e-164	541.2	0.9
NZ_CP011058.1|WP_045670997.1|3233398_3234058_+|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	3.5e-34	113.0	1.7

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP011058.1|WP_045673315.1|3216179_3217325_-|ROK-family-transcriptional-regulator	gnl|CDD|224851	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism].	1.7994e-54
NZ_CP011058.1|WP_045670988.1|3217658_3218999_+|extracellular-solute-binding-protein	gnl|CDD|270453	cd14750, PBP2_TMBP, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose; possesses type 2 periplasmic binding fold. This group represents the periplasmic trehalose/maltose-binding component of an ABC transport system and related proteins from archaea and bacteria. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 proteins are comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	3.74855e-86
NZ_CP011058.1|WP_045671003.1|3242595_3243519_+|sugar-ABC-transporter-permease	gnl|CDD|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	1.97771e-73
NZ_CP011058.1|WP_045670993.1|3227366_3229796_+|CRISPR-associated-helicase/endonuclease-Cas3	gnl|CDD|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	8.75652e-79
NZ_CP011058.1|WP_045670987.1|3213216_3214212_+|D-cysteine-desulfhydrase-family-protein	gnl|CDD|179673	PRK03910, PRK03910, D-cysteine desulfhydrase; Validated.	6.1981e-156
NZ_CP011058.1|WP_045670986.1|3212528_3212993_+|FixH-family-protein	gnl|CDD|379037	pfam13115, YtkA, YtkA-like.	3.72924e-06
NZ_CP011058.1|WP_045671001.1|3239635_3240547_-|N-acetylmuramic-acid-6-phosphate-etherase	gnl|CDD|235467	PRK05441, murQ, N-acetylmuramic acid-6-phosphate etherase; Reviewed.	1.76837e-160
NZ_CP011058.1|WP_045671002.1|3241028_3242432_+|extracellular-solute-binding-protein	gnl|CDD|270303	cd13585, PBP2_TMBP_like, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold. This family includes the periplasmic trehalose/maltose-binding component of an ABC transport system and related proteins from archaea and bacteria. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.05932e-41
NZ_CP011058.1|WP_045670996.1|3232548_3233409_+|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl|CDD|187820	cd09689, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas7 is a RAMP superfamily protein; Subunit of the Cascade complex; also known as Csd2 family.	4.41081e-131
NZ_CP011058.1|WP_052702968.1|3219063_3220002_+|sugar-ABC-transporter-permease	gnl|CDD|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	6.09455e-86
NZ_CP011058.1|WP_158453676.1|3220881_3222084_+|GNAT-family-N-acetyltransferase	gnl|CDD|379240	pfam13527, Acetyltransf_9, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	4.30672e-21
NZ_CP011058.1|WP_045670994.1|3229918_3230638_+|type-I-C-CRISPR-associated-protein-Cas5	gnl|CDD|273847	TIGR01876, cas_Cas5d, CRISPR-associated protein Cas5, subtype I-C/DVULG. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This small Cas family is represented by CT1134 of Chlorobium tepidum. This family belongs to a set of several Cas protein families, one each for a number of different CRISPR/Cas subtypes, that share a region of N-terminal sequence similarity modeled by TIGR02593. This family represents the Dvulg subtype of CRISPR/Cas locus.	7.18589e-93
NZ_CP011058.1|WP_045670998.1|3234054_3235086_+|type-I-C-CRISPR-associated-endonuclease-Cas1	gnl|CDD|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	0
NZ_CP011058.1|WP_045670991.1|3222130_3223120_+|Gfo/Idh/MocA-family-oxidoreductase	gnl|CDD|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	3.08934e-73
NZ_CP011058.1|WP_045673318.1|3235096_3235387_+|CRISPR-associated-endonuclease-Cas2	gnl|CDD|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	2.61299e-31
NZ_CP011058.1|WP_045670989.1|3220021_3220861_+|carbohydrate-ABC-transporter-permease	gnl|CDD|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	6.55924e-81
NZ_CP011058.1|WP_045673317.1|3223233_3224211_+|Gfo/Idh/MocA-family-oxidoreductase	gnl|CDD|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	1.40563e-66
NZ_CP011058.1|WP_045670997.1|3233398_3234058_+|CRISPR-associated-protein-Cas4	gnl|CDD|273040	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4. This model represents a family of proteins associated with CRISPR repeats in a wide set of prokaryotic genomes. This scope of this model has been broadened since it was first built to describe an archaeal subset only. The function of the protein is undefined. Distantly related proteins, excluded from this model, include ORFs from Mycobacteriophage D29 and Sulfolobus islandicus filamentous virus and a region of the Schizosaccharomyces pombe DNA replication helicase Dna2p.	3.8957e-26
NZ_CP011058.1|WP_045670995.1|3230634_3232533_+|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl|CDD|187887	cd09757, Cas8c_I-C, CRISPR/Cas system-associated protein Cas8c. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Zn-finger domain containing protein, distant homologs of Cas8 proteins; signature gene for I-C subtype; also known as Csd1 family.	1.41658e-176

Protein sequences

>NZ_CP011058.1|WP_045673317.1|3223233_3224211_+|Gfo/Idh/MocA-family-oxidoreductase
MKIGVISLAHMHAVGYMSAINQLEGVELTGIWHDDAEAGGRIAERFGTTFYADFNELIGSGIDAVIVTSENVNHVRHVVAAAEAGKHVLCEKPLATKIEDAQAMIDICRANGVLLQTAFPVRFQTSVKRGKQLLESGKYGNIIAIKGTNRGRIPGGWFLDRNLSGGGAVIDHTVHVVDVMRWYMGAEVTKVYAESASRFSNGLIDDCGMLTMSFDNGVFASLDCSWSRNKKFPTWGDVTLEIVCENGTLSIDAFNQKLNRYSDETGLEWDFWGDDMDLELIRDFVRSIREGKREASVTGEDGLRAVEVALAAYESSESHAVVTLR
>NZ_CP011058.1|WP_045670991.1|3222130_3223120_+|Gfo/Idh/MocA-family-oxidoreductase
MLYVLVIGAGTMGRTHAEAYAAMEGVQLAGIADADLASAEKAARQFGTQEFGSYEEAAESLETIDVVDVCLPTFLHREFVLKAADDGKHVICEKPLAGSLDDARFMIDYCAAKGVRLFVGHVVRFFPEYEKAKRLMEESAIGEVAVAKASRTSGFPRAWNNWYADSSKSGGVLMDLSIHDFDYLRWCFGEVERVFAKSTPPSSSVEGGYALTTLTFRSGVIAHVEGSWSHQKFTTSFEFAGTDGIIDYNSAKDNPIVSFTRTKGEPAGGVPVPESPLLETPYYRELAHFMSCITTGAEPIVTAEDAYQALAISLAAIRSAETGEAVTPG
>NZ_CP011058.1|WP_158453676.1|3220881_3222084_+|GNAT-family-N-acetyltransferase
MARIEIRHVRGRAEMERVYDLLGNVFTVGRAFFQKRLDYDAAYDPETTWVATVEGELAASVQLFPYDMRVGEARLKIGGIGSVSSDPRFRGMGLVHGILLEMTEWMKKREYDLSLLFTGIHPFYEKVGWETVEEPRYELDAASVAGSYDDSVYRISSFSRSDLEEIMAVCDAYNAGNTNSRIRSAEYWDGLLKWSDNLFGSFLTARKKGRIVAYAIAGNEKDGAVELQECAFMDGEGAAMKPLFAALAAGETVKRLSAVIPEDGILSEALRSLGPVDVQIGNYSMWKIIGFAPMLRKLEPVFTRRLVEADEANRAVMPERVLLRCGGEKAVLAIGSHGAAVLPASETLEYDEEIKCTAAEFSAMLTQGSQVLTRESLKGHPVVRALFPGQRYAMWKTEAF
>NZ_CP011058.1|WP_045670989.1|3220021_3220861_+|carbohydrate-ABC-transporter-permease
MSKGLNRILLYIGVIVVICFTVAPLLWAFVVSVSPATELSTLARQWLPRQMTFDNYVQVLSLSDNADTFKNSLLNSFIVAGSTTFLALIFGSFGAYAFARLRFRFKDRLSVIFLFTQMVPSIAIALPLYLIFKNIGLLDTKTSLTLANLSFTLPFIIWMMRAFFGSIPKELEEAAFIDGLGRFGALFRIILPISAPGLFAIGVFAYLNTWNEFNTALVLTGSDQSKTMPVVINEFLGRFSVDYGLMASSGIIGLLPPVLLALVFQRYLVDGMTSGAVKG
>NZ_CP011058.1|WP_052702968.1|3219063_3220002_+|sugar-ABC-transporter-permease
MINKAAREMSSPKKMISEKKMISEPKFALLLLLPTIVILLGLLLYPFLYSIYLAFVNLNLTKPWIGTKFVGLENFATVLKDNEFWLSMLTTFYFTVFNVAASMVIGLAAALLFNTKFRFRGLARSLLLIPWAMPGVVNAMLWQTMLHPNYGLVNGLLLKLGLISDPINWLSDPKLALASVITAQLWTSFPFVALMYLAALQSIPYDLIEAGKIDGAGTFRIFTHIIVKLLVPVTLVLLVLRTIDSFRTFDLIFAMTKGGPANATELAGVYLYKQGFMFSNFGVGSAGSYVLTAFILVFVILYMRILRQRDDH
>NZ_CP011058.1|WP_045670988.1|3217658_3218999_+|extracellular-solute-binding-protein
MKRKSSVWALLMIVLAVAVLSACGKNSNSADSGGTTATNSGGTTETDTSKNDKPLSGTVLHTISSPSNEEFFAKINQEFKDKTGIDVQVDTVGYNDVAPKLMNSFMAGGSTYDLFVMDVIDLPRFVSAGWVAPVDQWITDDMKKDLLPFAAQALQYQGKFYGLPYASEYKSFVYNKTLLEKAGFTAPPKTWDEFIAYSKALQEKGIVKYASAWAWSQTEGLVCDFVAIASSMGGKLFDDSGNPVLNSPENVKALQLMVDMIYKDKIVDPASLQYNESNVLNAMSAGDIAFELNWGLPLTPLNDASQSKIVGQADVAPLPYTVSSATIAGPMSYAISAGSKNKDAAWEYIKFLNDQNGAKRQALEIGMFPGWKSVYEDAEVKSGVPGLDKILEQAEVAVNRPQIPWYNEWSSKFQVELQNALTQKKTPQQALDDAMAESLKVKESNS
>NZ_CP011058.1|WP_045673315.1|3216179_3217325_-|ROK-family-transcriptional-regulator
MIREHGPISRSEIAKRNGISPTTVASATQELMKEGYVCEVGAGASNGGRKPILLKLASDHLYLIGISVSNFMIEIAQMNLEANISRRSARPVRSLSGDELIEAILSDIALFLQQCPPREQCIGISLITPGVVNSESGTLYFNSKLHLENIPFKQLIETRFGIKTWVENDLNAMVLAEKRFGPYGKCKNMIYVSVADGVGAGIFFHDILLRGGVGGAGELGHTIVDRNGIRCECGNVGCLENYVNWPAVYSRIFASVTRGKPSVIMDLAEGDITRITPAIFKEAIQKHDPLAVDLADEISSFLGLGMVNLINLFNPEIVIIGGSVCVDNNRVIENVRKYVASHALPVLRNLPIRQSTLGKDADLIAAASILLQDIFHFSLAE
>NZ_CP011058.1|WP_052702967.1|3214467_3215703_+|hypothetical-protein
MKAWKAACTMIILGSVILAGCGQENEKNEAASTGTNATVESKASETKPAETKETAGTTETAETAAEGTGAFVSAAKELVSGLKADAEAGKVDWDKYSELYNSKLKAVVQARDTEAESHVDEQLEAAAAAGKEGSLSPVVVSQLYDKLLQKVAFLTMRHEFKEANEKFTDKPFVADELKEAREVYDGILKGMVEKRDTAYETQLAGIIDSGFAEMEQAADKGDNLAYNLGKQLVDKSLMKAFYLASGADKGYGYKVEQAAKQPGDNDPKVGQAEGWAFFQSLKTYLEGHDKESANYIESQFDLSNDVKNVKGDLINQAYVRAFAATAKDEYTESFENWGKDKSVITALEGALFINVIERDLSKALGGDAKAKALTDNAQKLLDEVKAGNKEQAEATYKLIEADLNKLASYGK
>NZ_CP011058.1|WP_045670987.1|3213216_3214212_+|D-cysteine-desulfhydrase-family-protein
MTNIPDRVPLANLPTKIEKLERLSAQLGGPSLFIKRDDQTGTEFSGNKVRKLEYSLKEALAAGHDYVITCGGIQSNHCRSTAAAAAKLGLKSYLVLRGNEPQEPDGNLLLDHLLGAQIRYITAEEYRERRAEIMESVKDKLTGQGYKPYIIPEGASNGIGSFGYYTALREIVEQEKELGVHFDAIVVAVGSGGTYAGLLLASKTLHYKADIIGINVCDDEYYFRHVIDSILQDSGRYLQEDIAYAKQDFHIIDGYVGQGYGISSPEVRQFIFDFAKLEGVILDPVYTGKALFGLVEEIKKGRFNDLHNILFIHTGGLFGLFPQKHEFINPN
>NZ_CP011058.1|WP_045670986.1|3212528_3212993_+|FixH-family-protein
MKNGGKLTVVLICMLLLSACSPPSPNAASKYQKENVLGIVIIVPDPITLGKPQRFIAVLEQAGTKVDNADDVRFTIWGSGDTGPRETVAAANDGNGIYSVEKMIDREGVYYVQVNASAGGSSVMPTKRFIAGDVTQEDGAPDNLHQAPTGHEHH
>NZ_CP011058.1|WP_045670993.1|3227366_3229796_+|CRISPR-associated-helicase/endonuclease-Cas3
MDYIAHIRESDKEIQSVEAHLLGVKALAESFGDKIGVKHIAGLAGMLHDMGKYTHEFKEYIREAVNNPDSPPKRGSVDHSTAGAKLLFQKFHQGVPSRLEWILAEVVGNAIISHHSYLHDFLNPHLESPYLNRVQEKHLDEFERSRQCFFDFVISEMEFQQYVSNALVELEAYLSKPSSENGESKLMFLIKFIFSALIDADRTNTRLFEENKIDEPEQSRKELFDAYYQKLMKKINSYQVQEDAKTAINVLRREMSDQCDQFAEKPSGIYTLSIPTGGGKTLASLRYALQHACRENKQHIIYVVPFTTIIEQNAKEVRKILSDDGHILEHHSNVIDDLNDDDENEDGIINTRQKLKLAKDNWDSPIIFTTMVQFLNVFYAKGSRNIRRLHNLSKSVIIFDEVQKVPVSCVSLFNQALNFLNTYCDSSLILCTATQPALGFVELERKLDMNKDAEIIQNLDRVIKAFKRVEIIDKATDELFDNDKLTDFIAEKMDEVQSVLVILNTKTVVKRLYRQMEVSGVPIYHLSTSMCAAHRNHILGQVREHLNQNEKVICISTQLIEAGVDVSFDCVIRSLAGLDSIAQAAGRCNRHGKREIQQVYVIDHAEENLNHLQEIKIGKKLSKRILIDLKRDQNQHGGNILSAQAMDRYFKEFYTEFSSKLNYFIRKLQKDMTELLMSERKHNTYYQAYLHNKKERLPLCIVNSYRTAAEYFQVIDDQTAAVIVPYDEEGKDIIAQLNGNETIENFSGLLRKAQQFTINLFYHEREQLEQNDGVVSLLDGKILALKETAYSKEYGLDLENDGRFDLSMY
>NZ_CP011058.1|WP_045670994.1|3229918_3230638_+|type-I-C-CRISPR-associated-protein-Cas5
MRNAIEFIVYGDYALFTDPLTKLGGEKLSYQVPTYQALKGILESIYWKTALLMVVDEVRIMNPIRMESKGIRPMDYGGGNTLANYTYLRDPKYQVRAHFEFNMNRTDMAYDRNENKHHSILRRSLKVGGRRDIFLGARECQAYVEPCIFGEEDGFYDDYGDIHLGSMVHGLNYPDETGRDQLEIRLWNPVMKDGIIQFIRPEQCTQVRTIMDMEPKRFDDTSVLSADDLLSQLEEGGSP
>NZ_CP011058.1|WP_045670995.1|3230634_3232533_+|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MSWLLNLYETYESNLDLVGKIEKKHNEQEYTLLPVSHTTQNAHIEVEITEDGEFHSATVIDKSDASTLIPCTEDSASRAGAKIAPYPLHDKLSYVAGDYAAYGGEIKKEEPFPYYIKQLEDWANSPYAVANVKSIYRYLSKGRLIQDLVKEKILYLDAKNRLLDKWDKDAESLYGARPRIFSVIAGEQASAFVRFNVYSPTKMLTKVWKDQEMYDSFVRFYNSKLGDEDLCYVTGRTLPATDKHANKIRNAADKAKLISANDTSGFTFRGRFNQSHEAASISYEVSQKAHNALKWLINHQGKMIDQRVFLVWGNDELDIPGFTEDYFSIDPTPVATKERISFTNKEFAIEVAKALDGYRNQLSSSSNGKANVNILVLDSATTGRMAVLYYRNMDKELYLDKLVKWHSTCAWLHQYRKDDNGNFVRFYGAPATKDIAFAAYGPRASDKIVKGLMERMLPCMIDGRKIPSDVVASAFRRASNPVSMEKWEWEKTLSITCALISKEQEGFNVALDKENNDRNYLFGRLLAVADVLERRALGDEERATNAIRYMNAFSRHPERTWKTIQACLQPYQARLGTKAIYWAKIIDEVASRIPADKFNNKPLSGLYLLGFYSQRHELYQKKETNETTEESI
>NZ_CP011058.1|WP_045670996.1|3232548_3233409_+|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MSTLDHKIDFAVVLSVTKANPNGDPLNGNRPRQNYDGYGEISDVALKRKIRNRLQDMGESIFVQSNDRKTDSYGSLRERADANAELEKILKSKSGSSDEFSSIACREWLDVRSFGQVFAFKADKGAGVSVGIRGPVSIHTATSIDPIDISSMQITKSVNSEPGASRGSDTMGMKHRVDSGVYIFFGSINTQLAEKTGFTNEDAEKFKNALVTLFENDASSARPEGSMEVHKVYWWEHNSKLGQYSSAKVHRSLSFERLAEEPNAFEDYEFFIQPLEGLKVEIINGL
>NZ_CP011058.1|WP_045670997.1|3233398_3234058_+|CRISPR-associated-protein-Cas4
MDYNEDDHYLMLSGIQHFQFCKRQWALIHIEQQWEENVRTIEGEHLHRNADQPFTREKRGDKLIVRAMPVKSESLKITGVCDVVEFIKNDSGVEINGADGKYIAYPIEYKRGKPKMNDEDILQLAAQAICLEEMLLCEIDVGYMFYNEIKHRVEVPLTSAIKNKVKLIVAEMQDYYNRRYTPKVKTGSFCRNCSLQNICLPELMNKRSVKSYVEGKLKE
>NZ_CP011058.1|WP_045670998.1|3234054_3235086_+|type-I-C-CRISPR-associated-endonuclease-Cas1
MKKLLNTLYITQPDVYLSLDGDNIVLLKEQENLGRLPLHNLESIITFGYTGASPALMGYCAERNIQLVFFTKNGRFLARVIGESKGNVVLRKKQYAVSEDEILSAKVARNFIVGKIYNHKWIIERMTRDYALRIDVPLFKAISQQLSALILDVRACEDLERLRGLEGQAAISYNKLFDPMILQQKEDFYFHSRSRRPPLDNVNAMLSFAYSLLANDVASALEGVGLDAYVGFLHRDRPGRASLALDVMEELRGVFADKFVLTLINKKIVSKEDFLKKENGAVIMMDEARKKFLTAWQNKKQEKITHPFLGEKISWGLVPHAQALLLARYLRNDLDEYPPFFWK
>NZ_CP011058.1|WP_045673318.1|3235096_3235387_+|CRISPR-associated-endonuclease-Cas2
MLVLVTYDVSTVSSEGQRRLRQVSKICQNYGQRVQNSVFECVVDAAQFAVLKLKLLDVIDQEQDSLRFYQLGNNYKKKVEHLGVKQSIDLEGPLIL
>NZ_CP011058.1|WP_045671001.1|3239635_3240547_-|N-acetylmuramic-acid-6-phosphate-etherase
MNMLSLLTTEQPNANTYNIDQMNAEQIMYLINEEDRHIAEHVRAVIPKVAAAAELVVEAFRKGGRLFYIGAGTSGRLGILDASECPPTFGTDPSMVQGLIAGGFRAMKEPIEGAEDSPEMGAKEVEEHGIGANDVLVGIAASGRTPYVLGAMKRAGELGAVVIGLCNNTDTPMKQYAQLVIDPVVGPEVVLGSTRMKAGTSQKLILNMLTTTSMILMGKVYQNLMVDLNPSNEKLVYRAKRIIHMATGADDVQVEQAFAAADGHVKTAIVMLLTGTGADEAKALLSRSGGFVRSAVELTGSGT
>NZ_CP011058.1|WP_045671002.1|3241028_3242432_+|extracellular-solute-binding-protein
MNELRKSLIALLTALVLVIVTACGSNAGNGGESGSGSTSESTNTGSAEAAKDTITVWTYPVYETYEADLKVLVDDFMKEHPNLTVKTEMLSWAEGPQKFDVALNAGNPPDLYFHAVDGAYASSGLELPIDSYLTPEIKNDYYPGTLELAQVQGVQYGLPLYQFQWGWGGNKRLLEEAGIDWQKIQKEGWTWSEFKAAAAKLTKKLPDGSTQYALTTDGTSLDFIELLTRNNGMPDALDENGKLQWNDNRILDTMTFIQDLMKSGYMPKETAALAPKKRTEMFYAGQTALISKAIPYYDVMIQNRNKDIDAGKVQGEKIDFVLLPVPHNDNAPAKAMMGAEGYLMFKQKKDQGEEHAKNAFLVMEALSGAKAGMASNQLVLPFVRDSQAKEFAGKELGQPANIEASKVMATTMQMPITLKLDNDTSAKMKQFKEQVVKPNMQALFAGEKTPDAILQDFVSKGKLIVGK
>NZ_CP011058.1|WP_045671003.1|3242595_3243519_+|sugar-ABC-transporter-permease
MQTAAAAPTPKRRSSPFGRFVREYGWAYLFILVPVLMFLVFTLYPVISAFVMSFQRYNIMHSTWIGFDNYKALAQNDVFWKSIRNTVIFTIGTVPLNIVITFVLSFFIYQMKNSWQTFFKASLYLPTVASGVTLSVVWLAIFDPTDAGLLNRLLGLFGIDPVIWLGKSGTALFSLMLMNWFGSHGAGIILYLAAMGGIPKSLYEAADIDHASGWSKFYRITWPLLKPTTLYLLVTGVITSFQVFISVYLMTQGGPNFATTTIAYLIYDTAFKFYDFGLASAQSFVLAAIIIIISIVQFKFFSSDVEY

Crispr_ID: NZ_CP011058_11

• CRISPR_ID: NZ_CP011058_11
• CRISPR_location: 3235568-3237445
• CRISPR_type: TypeI
• Repeat_type: I-C
• Spacer_info: 28 spacers
• Cas_protein_info: cas2,cas1,cas4,cas7,cas8c,cas5,cas3

Consensus repeat of NZ_CP011058_11

Consensus_repeat	Method
ATTTCAATCCACGCATCCGCGAGGGATGCGAC	PILER-CR
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	CRISPRCasFinder
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	CRT

spacers of NZ_CP011058_11

>11.1|3235600|33|NZ_CP011058|PILER-CR,CRISPRCasFinder,CRT
ACAACAGACCTGTTAAACCGATACGTCGATGGA
>11.2|3235665|33|NZ_CP011058|PILER-CR,CRISPRCasFinder,CRT
GCCATTTGCTCCATGACGTGAAGCAGCTCCTGC
>11.3|3235730|33|NZ_CP011058|PILER-CR,CRISPRCasFinder,CRT
TTCAGAACCCGATAGGAAACCGCCGCATCATTC
>11.4|3235795|35|NZ_CP011058|PILER-CR,CRISPRCasFinder,CRT
TTTTTTGTTGCTTCAACCATAAAATCACCTCGTAT
>11.5|3235862|34|NZ_CP011058|PILER-CR,CRISPRCasFinder,CRT
CTTCCACAGACAACAAAGCGACCAAAAAACCGTT
>11.6|3235928|32|NZ_CP011058|PILER-CR,CRISPRCasFinder,CRT
GCATTGACGTGATCGTGACCACCGGATTCAAC
>11.7|3235992|34|NZ_CP011058|PILER-CR,CRISPRCasFinder,CRT
TCCCGTCTGCAGCAATTGCAGGGACAAGAAACGA
>11.8|3236058|34|NZ_CP011058|PILER-CR,CRISPRCasFinder,CRT
CTTTTTGACCGGCATACAACCGGACCATCCGATT
>11.9|3236124|34|NZ_CP011058|PILER-CR,CRISPRCasFinder,CRT
GTCCCTAACGCAAAAGGAGCCACAACGACGCAGC
>11.10|3236190|34|NZ_CP011058|PILER-CR,CRISPRCasFinder,CRT
ATCCATCAGGATTAGCGCATTCTTAACCCGTCCC
>11.11|3236256|34|NZ_CP011058|PILER-CR,CRISPRCasFinder,CRT
TTCTCCGGTCACAACTAAATATTATGACGTGACA
>11.12|3236322|34|NZ_CP011058|PILER-CR,CRISPRCasFinder,CRT
GTATGAATCGAATCAATCAAATGTCGTGACGGCT
>11.13|3236388|34|NZ_CP011058|PILER-CR,CRISPRCasFinder,CRT
TACTTTTTTTTAGGAGTCCGCCAAGATTGCGGGC
>11.14|3236454|35|NZ_CP011058|PILER-CR,CRISPRCasFinder,CRT
GTGTTCACCTGCTCCGCGATGCTGCGGATGATATT
>11.15|3236521|33|NZ_CP011058|PILER-CR,CRISPRCasFinder,CRT
GGATTGCGTTTCTCCAACGCGTATTCCTTACCG
>11.16|3236586|34|NZ_CP011058|PILER-CR,CRISPRCasFinder,CRT
GCCAAATCGTCAATGAAGTTCTGACGCAGTTCCC
>11.17|3236652|33|NZ_CP011058|PILER-CR,CRISPRCasFinder,CRT
ATCTGAACCGCCTCCTTTAATACAATTGTATCA
>11.18|3236717|32|NZ_CP011058|PILER-CR,CRISPRCasFinder,CRT
ATTTTACGTACGTAATTTAAAACCTTCGTCAT
>11.19|3236781|35|NZ_CP011058|PILER-CR,CRISPRCasFinder,CRT
AGGTTCAGTTACTGGAACGCCTGGATCAGCGAGAC
>11.20|3236848|34|NZ_CP011058|PILER-CR,CRISPRCasFinder,CRT
ATCCCCAAATCATAGTAATTTGGCAACATTATAC
>11.21|3236914|33|NZ_CP011058|PILER-CR,CRISPRCasFinder,CRT
TCGTACTCGTACAGGTTATCGATTCCATATTGC
>11.22|3236979|34|NZ_CP011058|PILER-CR,CRISPRCasFinder,CRT
AGCCGTATATCGCGTTTAAAACGAACGTGTTGGT
>11.23|3237045|34|NZ_CP011058|PILER-CR,CRISPRCasFinder,CRT
AGGAGGCCCGGAGGAACCCCGGGAAACGTCTCAG
>11.24|3237111|34|NZ_CP011058|PILER-CR,CRISPRCasFinder,CRT
TTTTAGGAGGAGGTGAATAACATGGGACAAATCA
>11.25|3237177|36|NZ_CP011058|PILER-CR,CRISPRCasFinder,CRT
CTAAAATTTATTCAGAAGACGAAGAAAGCCGTGTCC
>11.26|3237245|34|NZ_CP011058|PILER-CR,CRISPRCasFinder,CRT
AGTTAGAACAGAGGTTCTCGGAAAAATAAAGGAT
>11.27|3237311|35|NZ_CP011058|PILER-CR,CRISPRCasFinder,CRT
CCACTAGCAGACATGGACATTAACAACGACAAGAT
>11.28|3237378|35|NZ_CP011058|PILER-CR,CRISPRCasFinder,CRT
ACGCGCCTTGCGGACGTGTACAAGACGGCCACGAC

CRISPR arrays and Neighbor proteins around NZ_CP011058_11

CRISPR arrays

The CRISPR arrays of NZ_CP011058_11

>merge|NZ_CP011058|11|3235568-3237445|PILER-CR,CRISPRCasFinder,CRT
GTCGCATCCCTCGCGGATGCGTGGATTGAAATACAACAGACCTGTTAAACCGATACGTCGATGGAGTCGCATCCCTCGCGGATGCGTGGATTGAAATGCCATTTGCTCCATGACGTGAAGCAGCTCCTGCGTCGCATCCCTCGCGGATGCGTGGATTGAAATTTCAGAACCCGATAGGAAACCGCCGCATCATTCGTCGCATCCCTCGCGGATGCGTGGATTGAAATTTTTTTGTTGCTTCAACCATAAAATCACCTCGTATGTCGCATCCCTCGCGGATGCGTGGATTGAAATCTTCCACAGACAACAAAGCGACCAAAAAACCGTTGTCGCATCCCTCGCGGATGCGTGGATTGAAATGCATTGACGTGATCGTGACCACCGGATTCAACGTCGCATCCCTCGCGGATGCGTGGATTGAAATTCCCGTCTGCAGCAATTGCAGGGACAAGAAACGAGTCGCATCCCTCGCGGATGCGTGGATTGAAATCTTTTTGACCGGCATACAACCGGACCATCCGATTGTCGCATCCCTCGCGGATGCGTGGATTGAAATGTCCCTAACGCAAAAGGAGCCACAACGACGCAGCGTCGCATCCCTCGCGGATGCGTGGATTGAAATATCCATCAGGATTAGCGCATTCTTAACCCGTCCCGTCGCATCCCTCGCGGATGCGTGGATTGAAATTTCTCCGGTCACAACTAAATATTATGACGTGACAGTCGCATCCCTCGCGGATGCGTGGATTGAAATGTATGAATCGAATCAATCAAATGTCGTGACGGCTGTCGCATCCCTCGCGGATGCGTGGATTGAAATTACTTTTTTTTAGGAGTCCGCCAAGATTGCGGGCGTCGCATCCCTCGCGGATGCGTGGATTGAAATGTGTTCACCTGCTCCGCGATGCTGCGGATGATATTGTCGCATCCCTCGCGGATGCGTGGATTGAAATGGATTGCGTTTCTCCAACGCGTATTCCTTACCGGTCGCATCCCTCGCGGATGCGTGGATTGAAATGCCAAATCGTCAATGAAGTTCTGACGCAGTTCCCGTCGCATCCCTCGCGGATGCGTGGATTGAAATATCTGAACCGCCTCCTTTAATACAATTGTATCAGTCGCATCCCTCGCGGATGCGTGGATTGAAATATTTTACGTACGTAATTTAAAACCTTCGTCATGTCGCATCCCTCGCGGATGCGTGGATTGAAATAGGTTCAGTTACTGGAACGCCTGGATCAGCGAGACGTCGCATCCCTCGCGGATGCGTGGATTGAAATATCCCCAAATCATAGTAATTTGGCAACATTATACGTCGCATCCCTCGCGGATGCGTGGATTGAAATTCGTACTCGTACAGGTTATCGATTCCATATTGCGTCGCATCCCTCGCGGATGCGTGGATTGAAATAGCCGTATATCGCGTTTAAAACGAACGTGTTGGTGTCGCATCCCTCGCGGATGCGTGGATTGAAATAGGAGGCCCGGAGGAACCCCGGGAAACGTCTCAGGTCGCATCCCTCGCGGATGCGTGGATTGAAATTTTTAGGAGGAGGTGAATAACATGGGACAAATCAGTCGCATCCCTCGCGGATGCGTGGATTGAAATCTAAAATTTATTCAGAAGACGAAGAAAGCCGTGTCCGTCGCATCCCTCGCGGATGCGTGGATTGAAATAGTTAGAACAGAGGTTCTCGGAAAAATAAAGGATGTCGCATCCCTCGCGGATGCGTGGATTGAAATCCACTAGCAGACATGGACATTAACAACGACAAGATGTCGCATCCCTCGCGGATGCGTGGATTGAAATACGCGCCTTGCGGACGTGTACAAGACGGCCACGACGTCGCATCCCTCGCGGATGCGTGGATTGAAATT

>NZ_CP011058|11|4|3235568-3237444|PILER-CR
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	ACAACAGACCTGTTAAACCGATACGTCGATGGA
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	GCCATTTGCTCCATGACGTGAAGCAGCTCCTGC
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	TTCAGAACCCGATAGGAAACCGCCGCATCATTC
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	TTTTTTGTTGCTTCAACCATAAAATCACCTCGTAT
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	CTTCCACAGACAACAAAGCGACCAAAAAACCGTT
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	GCATTGACGTGATCGTGACCACCGGATTCAAC
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	TCCCGTCTGCAGCAATTGCAGGGACAAGAAACGA
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	CTTTTTGACCGGCATACAACCGGACCATCCGATT
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	GTCCCTAACGCAAAAGGAGCCACAACGACGCAGC
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	ATCCATCAGGATTAGCGCATTCTTAACCCGTCCC
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	TTCTCCGGTCACAACTAAATATTATGACGTGACA
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	GTATGAATCGAATCAATCAAATGTCGTGACGGCT
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	TACTTTTTTTTAGGAGTCCGCCAAGATTGCGGGC
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	GTGTTCACCTGCTCCGCGATGCTGCGGATGATATT
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	GGATTGCGTTTCTCCAACGCGTATTCCTTACCG
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	GCCAAATCGTCAATGAAGTTCTGACGCAGTTCCC
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	ATCTGAACCGCCTCCTTTAATACAATTGTATCA
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	ATTTTACGTACGTAATTTAAAACCTTCGTCAT
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	AGGTTCAGTTACTGGAACGCCTGGATCAGCGAGAC
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	ATCCCCAAATCATAGTAATTTGGCAACATTATAC
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	TCGTACTCGTACAGGTTATCGATTCCATATTGC
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	AGCCGTATATCGCGTTTAAAACGAACGTGTTGGT
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	AGGAGGCCCGGAGGAACCCCGGGAAACGTCTCAG
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	TTTTAGGAGGAGGTGAATAACATGGGACAAATCA
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	CTAAAATTTATTCAGAAGACGAAGAAAGCCGTGTCC
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	AGTTAGAACAGAGGTTCTCGGAAAAATAAAGGAT
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	CCACTAGCAGACATGGACATTAACAACGACAAGAT
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	ACGCGCCTTGCGGACGTGTACAAGACGGCCACGAC
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT

>NZ_CP011058|11|9|3235568-3237445|CRISPRCasFinder
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	ACAACAGACCTGTTAAACCGATACGTCGATGGA
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	GCCATTTGCTCCATGACGTGAAGCAGCTCCTGC
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	TTCAGAACCCGATAGGAAACCGCCGCATCATTC
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	TTTTTTGTTGCTTCAACCATAAAATCACCTCGTAT
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	CTTCCACAGACAACAAAGCGACCAAAAAACCGTT
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	GCATTGACGTGATCGTGACCACCGGATTCAAC
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	TCCCGTCTGCAGCAATTGCAGGGACAAGAAACGA
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	CTTTTTGACCGGCATACAACCGGACCATCCGATT
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	GTCCCTAACGCAAAAGGAGCCACAACGACGCAGC
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	ATCCATCAGGATTAGCGCATTCTTAACCCGTCCC
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	TTCTCCGGTCACAACTAAATATTATGACGTGACA
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	GTATGAATCGAATCAATCAAATGTCGTGACGGCT
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	TACTTTTTTTTAGGAGTCCGCCAAGATTGCGGGC
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	GTGTTCACCTGCTCCGCGATGCTGCGGATGATATT
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	GGATTGCGTTTCTCCAACGCGTATTCCTTACCG
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	GCCAAATCGTCAATGAAGTTCTGACGCAGTTCCC
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	ATCTGAACCGCCTCCTTTAATACAATTGTATCA
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	ATTTTACGTACGTAATTTAAAACCTTCGTCAT
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	AGGTTCAGTTACTGGAACGCCTGGATCAGCGAGAC
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	ATCCCCAAATCATAGTAATTTGGCAACATTATAC
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	TCGTACTCGTACAGGTTATCGATTCCATATTGC
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	AGCCGTATATCGCGTTTAAAACGAACGTGTTGGT
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	AGGAGGCCCGGAGGAACCCCGGGAAACGTCTCAG
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	TTTTAGGAGGAGGTGAATAACATGGGACAAATCA
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	CTAAAATTTATTCAGAAGACGAAGAAAGCCGTGTCC
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	AGTTAGAACAGAGGTTCTCGGAAAAATAAAGGAT
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	CCACTAGCAGACATGGACATTAACAACGACAAGAT
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	ACGCGCCTTGCGGACGTGTACAAGACGGCCACGAC
GTCGCATCCCTCGCGGATGCGTGGATTGAAATT

>NZ_CP011058|11|2|3235568-3237444|CRT
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	ACAACAGACCTGTTAAACCGATACGTCGATGGA
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	GCCATTTGCTCCATGACGTGAAGCAGCTCCTGC
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	TTCAGAACCCGATAGGAAACCGCCGCATCATTC
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	TTTTTTGTTGCTTCAACCATAAAATCACCTCGTAT
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	CTTCCACAGACAACAAAGCGACCAAAAAACCGTT
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	GCATTGACGTGATCGTGACCACCGGATTCAAC
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	TCCCGTCTGCAGCAATTGCAGGGACAAGAAACGA
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	CTTTTTGACCGGCATACAACCGGACCATCCGATT
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	GTCCCTAACGCAAAAGGAGCCACAACGACGCAGC
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	ATCCATCAGGATTAGCGCATTCTTAACCCGTCCC
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	TTCTCCGGTCACAACTAAATATTATGACGTGACA
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	GTATGAATCGAATCAATCAAATGTCGTGACGGCT
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	TACTTTTTTTTAGGAGTCCGCCAAGATTGCGGGC
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	GTGTTCACCTGCTCCGCGATGCTGCGGATGATATT
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	GGATTGCGTTTCTCCAACGCGTATTCCTTACCG
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	GCCAAATCGTCAATGAAGTTCTGACGCAGTTCCC
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	ATCTGAACCGCCTCCTTTAATACAATTGTATCA
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	ATTTTACGTACGTAATTTAAAACCTTCGTCAT
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	AGGTTCAGTTACTGGAACGCCTGGATCAGCGAGAC
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	ATCCCCAAATCATAGTAATTTGGCAACATTATAC
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	TCGTACTCGTACAGGTTATCGATTCCATATTGC
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	AGCCGTATATCGCGTTTAAAACGAACGTGTTGGT
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	AGGAGGCCCGGAGGAACCCCGGGAAACGTCTCAG
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	TTTTAGGAGGAGGTGAATAACATGGGACAAATCA
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	CTAAAATTTATTCAGAAGACGAAGAAAGCCGTGTCC
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	AGTTAGAACAGAGGTTCTCGGAAAAATAAAGGAT
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	CCACTAGCAGACATGGACATTAACAACGACAAGAT
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	ACGCGCCTTGCGGACGTGTACAAGACGGCCACGAC
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011058.1|WP_148505249.1|3252077_3252917_-|ABC-transporter-permease-subunit	unknown	unknown	gnl|CDD|224096
NZ_CP011058.1|WP_045671003.1|3242595_3243519_+|sugar-ABC-transporter-permease	unknown	unknown	gnl|CDD|224096
NZ_CP011058.1|WP_045671005.1|3244433_3245543_+|sn-glycerol-3-phosphate-ABC-transporter-ATP-binding-protein-UgpC	unknown	unknown	gnl|CDD|236947
NZ_CP011058.1|WP_045670998.1|3234054_3235086_+|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl|CDD|188360
NZ_CP011058.1|WP_045670993.1|3227366_3229796_+|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl|CDD|224124
NZ_CP011058.1|WP_045670991.1|3222130_3223120_+|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl|CDD|223745
NZ_CP011058.1|WP_052703204.1|3248293_3249934_+|beta-N-acetylhexosaminidase	unknown	unknown	gnl|CDD|366376
NZ_CP011058.1|WP_158453676.1|3220881_3222084_+|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|379240
NZ_CP011058.1|WP_045671001.1|3239635_3240547_-|N-acetylmuramic-acid-6-phosphate-etherase	unknown	unknown	gnl|CDD|235467
NZ_CP011058.1|WP_148505248.1|3249930_3251118_+|anhydro-N-acetylmuramic-acid-kinase	unknown	unknown	gnl|CDD|236579
NZ_CP011058.1|WP_045671002.1|3241028_3242432_+|extracellular-solute-binding-protein	unknown	unknown	gnl|CDD|270303
NZ_CP011058.1|WP_045670996.1|3232548_3233409_+|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	COG3649_cas7_CAS-I-C	gnl|CDD|187820
NZ_CP011058.1|WP_045671004.1|3243573_3244407_+|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl|CDD|223472
NZ_CP011058.1|WP_045670994.1|3229918_3230638_+|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09752_cas5_CAS-I-C	gnl|CDD|273847
NZ_CP011058.1|WP_045671006.1|3246408_3247089_+|hypothetical-protein	unknown	unknown	gnl|CDD|223550
NZ_CP011058.1|WP_045673318.1|3235096_3235387_+|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl|CDD|187856
NZ_CP011058.1|WP_045670995.1|3230634_3232533_+|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	pfam09709_cas8c_CAS-I-C	gnl|CDD|187887
NZ_CP011058.1|WP_045673317.1|3223233_3224211_+|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl|CDD|223745
NZ_CP011058.1|WP_045670997.1|3233398_3234058_+|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl|CDD|273040
NZ_CP011058.1|WP_045671007.1|3251192_3252059_-|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl|CDD|223472

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_CP011058.1|WP_045670996.1|3232548_3233409_+|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	COG3649_cas7_CAS-I-C	3e-122	402.1	0.1
NZ_CP011058.1|WP_045670995.1|3230634_3232533_+|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	pfam09709_cas8c_CAS-I-C	6.3e-164	541.2	0.9
NZ_CP011058.1|WP_045670994.1|3229918_3230638_+|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09752_cas5_CAS-I-C	1.9e-60	198.8	0.0
NZ_CP011058.1|WP_045670993.1|3227366_3229796_+|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	1e-90	299.8	14.8
NZ_CP011058.1|WP_045673318.1|3235096_3235387_+|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	2.2e-29	96.3	2.1
NZ_CP011058.1|WP_045670998.1|3234054_3235086_+|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	3e-145	478.3	0.0
NZ_CP011058.1|WP_045670997.1|3233398_3234058_+|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	3.5e-34	113.0	1.7

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP011058.1|WP_148505249.1|3252077_3252917_-|ABC-transporter-permease-subunit	gnl|CDD|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	4.5471e-79
NZ_CP011058.1|WP_045671003.1|3242595_3243519_+|sugar-ABC-transporter-permease	gnl|CDD|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	1.97771e-73
NZ_CP011058.1|WP_045671005.1|3244433_3245543_+|sn-glycerol-3-phosphate-ABC-transporter-ATP-binding-protein-UgpC	gnl|CDD|236947	PRK11650, ugpC, sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC.	0
NZ_CP011058.1|WP_045670998.1|3234054_3235086_+|type-I-C-CRISPR-associated-endonuclease-Cas1	gnl|CDD|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	0
NZ_CP011058.1|WP_045670993.1|3227366_3229796_+|CRISPR-associated-helicase/endonuclease-Cas3	gnl|CDD|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	8.75652e-79
NZ_CP011058.1|WP_045670991.1|3222130_3223120_+|Gfo/Idh/MocA-family-oxidoreductase	gnl|CDD|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	3.08934e-73
NZ_CP011058.1|WP_052703204.1|3248293_3249934_+|beta-N-acetylhexosaminidase	gnl|CDD|366376	pfam00933, Glyco_hydro_3, Glycosyl hydrolase family 3 N terminal domain.	3.97021e-102
NZ_CP011058.1|WP_158453676.1|3220881_3222084_+|GNAT-family-N-acetyltransferase	gnl|CDD|379240	pfam13527, Acetyltransf_9, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	4.30672e-21
NZ_CP011058.1|WP_045671001.1|3239635_3240547_-|N-acetylmuramic-acid-6-phosphate-etherase	gnl|CDD|235467	PRK05441, murQ, N-acetylmuramic acid-6-phosphate etherase; Reviewed.	1.76837e-160
NZ_CP011058.1|WP_148505248.1|3249930_3251118_+|anhydro-N-acetylmuramic-acid-kinase	gnl|CDD|236579	PRK09585, anmK, anhydro-N-acetylmuramic acid kinase; Reviewed.	9.3111e-165
NZ_CP011058.1|WP_045671002.1|3241028_3242432_+|extracellular-solute-binding-protein	gnl|CDD|270303	cd13585, PBP2_TMBP_like, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold. This family includes the periplasmic trehalose/maltose-binding component of an ABC transport system and related proteins from archaea and bacteria. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.05932e-41
NZ_CP011058.1|WP_045670996.1|3232548_3233409_+|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl|CDD|187820	cd09689, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas7 is a RAMP superfamily protein; Subunit of the Cascade complex; also known as Csd2 family.	4.41081e-131
NZ_CP011058.1|WP_045671004.1|3243573_3244407_+|carbohydrate-ABC-transporter-permease	gnl|CDD|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	3.08363e-80
NZ_CP011058.1|WP_045670994.1|3229918_3230638_+|type-I-C-CRISPR-associated-protein-Cas5	gnl|CDD|273847	TIGR01876, cas_Cas5d, CRISPR-associated protein Cas5, subtype I-C/DVULG. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This small Cas family is represented by CT1134 of Chlorobium tepidum. This family belongs to a set of several Cas protein families, one each for a number of different CRISPR/Cas subtypes, that share a region of N-terminal sequence similarity modeled by TIGR02593. This family represents the Dvulg subtype of CRISPR/Cas locus.	7.18589e-93
NZ_CP011058.1|WP_045671006.1|3246408_3247089_+|hypothetical-protein	gnl|CDD|223550	COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism].	4.69236e-05
NZ_CP011058.1|WP_045673318.1|3235096_3235387_+|CRISPR-associated-endonuclease-Cas2	gnl|CDD|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	2.61299e-31
NZ_CP011058.1|WP_045670995.1|3230634_3232533_+|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl|CDD|187887	cd09757, Cas8c_I-C, CRISPR/Cas system-associated protein Cas8c. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Zn-finger domain containing protein, distant homologs of Cas8 proteins; signature gene for I-C subtype; also known as Csd1 family.	1.41658e-176
NZ_CP011058.1|WP_045673317.1|3223233_3224211_+|Gfo/Idh/MocA-family-oxidoreductase	gnl|CDD|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	1.40563e-66
NZ_CP011058.1|WP_045670997.1|3233398_3234058_+|CRISPR-associated-protein-Cas4	gnl|CDD|273040	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4. This model represents a family of proteins associated with CRISPR repeats in a wide set of prokaryotic genomes. This scope of this model has been broadened since it was first built to describe an archaeal subset only. The function of the protein is undefined. Distantly related proteins, excluded from this model, include ORFs from Mycobacteriophage D29 and Sulfolobus islandicus filamentous virus and a region of the Schizosaccharomyces pombe DNA replication helicase Dna2p.	3.8957e-26
NZ_CP011058.1|WP_045671007.1|3251192_3252059_-|carbohydrate-ABC-transporter-permease	gnl|CDD|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	7.31584e-80

Protein sequences

>NZ_CP011058.1|WP_045673318.1|3235096_3235387_+|CRISPR-associated-endonuclease-Cas2
MLVLVTYDVSTVSSEGQRRLRQVSKICQNYGQRVQNSVFECVVDAAQFAVLKLKLLDVIDQEQDSLRFYQLGNNYKKKVEHLGVKQSIDLEGPLIL
>NZ_CP011058.1|WP_045670998.1|3234054_3235086_+|type-I-C-CRISPR-associated-endonuclease-Cas1
MKKLLNTLYITQPDVYLSLDGDNIVLLKEQENLGRLPLHNLESIITFGYTGASPALMGYCAERNIQLVFFTKNGRFLARVIGESKGNVVLRKKQYAVSEDEILSAKVARNFIVGKIYNHKWIIERMTRDYALRIDVPLFKAISQQLSALILDVRACEDLERLRGLEGQAAISYNKLFDPMILQQKEDFYFHSRSRRPPLDNVNAMLSFAYSLLANDVASALEGVGLDAYVGFLHRDRPGRASLALDVMEELRGVFADKFVLTLINKKIVSKEDFLKKENGAVIMMDEARKKFLTAWQNKKQEKITHPFLGEKISWGLVPHAQALLLARYLRNDLDEYPPFFWK
>NZ_CP011058.1|WP_045670997.1|3233398_3234058_+|CRISPR-associated-protein-Cas4
MDYNEDDHYLMLSGIQHFQFCKRQWALIHIEQQWEENVRTIEGEHLHRNADQPFTREKRGDKLIVRAMPVKSESLKITGVCDVVEFIKNDSGVEINGADGKYIAYPIEYKRGKPKMNDEDILQLAAQAICLEEMLLCEIDVGYMFYNEIKHRVEVPLTSAIKNKVKLIVAEMQDYYNRRYTPKVKTGSFCRNCSLQNICLPELMNKRSVKSYVEGKLKE
>NZ_CP011058.1|WP_045670996.1|3232548_3233409_+|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MSTLDHKIDFAVVLSVTKANPNGDPLNGNRPRQNYDGYGEISDVALKRKIRNRLQDMGESIFVQSNDRKTDSYGSLRERADANAELEKILKSKSGSSDEFSSIACREWLDVRSFGQVFAFKADKGAGVSVGIRGPVSIHTATSIDPIDISSMQITKSVNSEPGASRGSDTMGMKHRVDSGVYIFFGSINTQLAEKTGFTNEDAEKFKNALVTLFENDASSARPEGSMEVHKVYWWEHNSKLGQYSSAKVHRSLSFERLAEEPNAFEDYEFFIQPLEGLKVEIINGL
>NZ_CP011058.1|WP_045670995.1|3230634_3232533_+|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MSWLLNLYETYESNLDLVGKIEKKHNEQEYTLLPVSHTTQNAHIEVEITEDGEFHSATVIDKSDASTLIPCTEDSASRAGAKIAPYPLHDKLSYVAGDYAAYGGEIKKEEPFPYYIKQLEDWANSPYAVANVKSIYRYLSKGRLIQDLVKEKILYLDAKNRLLDKWDKDAESLYGARPRIFSVIAGEQASAFVRFNVYSPTKMLTKVWKDQEMYDSFVRFYNSKLGDEDLCYVTGRTLPATDKHANKIRNAADKAKLISANDTSGFTFRGRFNQSHEAASISYEVSQKAHNALKWLINHQGKMIDQRVFLVWGNDELDIPGFTEDYFSIDPTPVATKERISFTNKEFAIEVAKALDGYRNQLSSSSNGKANVNILVLDSATTGRMAVLYYRNMDKELYLDKLVKWHSTCAWLHQYRKDDNGNFVRFYGAPATKDIAFAAYGPRASDKIVKGLMERMLPCMIDGRKIPSDVVASAFRRASNPVSMEKWEWEKTLSITCALISKEQEGFNVALDKENNDRNYLFGRLLAVADVLERRALGDEERATNAIRYMNAFSRHPERTWKTIQACLQPYQARLGTKAIYWAKIIDEVASRIPADKFNNKPLSGLYLLGFYSQRHELYQKKETNETTEESI
>NZ_CP011058.1|WP_045670994.1|3229918_3230638_+|type-I-C-CRISPR-associated-protein-Cas5
MRNAIEFIVYGDYALFTDPLTKLGGEKLSYQVPTYQALKGILESIYWKTALLMVVDEVRIMNPIRMESKGIRPMDYGGGNTLANYTYLRDPKYQVRAHFEFNMNRTDMAYDRNENKHHSILRRSLKVGGRRDIFLGARECQAYVEPCIFGEEDGFYDDYGDIHLGSMVHGLNYPDETGRDQLEIRLWNPVMKDGIIQFIRPEQCTQVRTIMDMEPKRFDDTSVLSADDLLSQLEEGGSP
>NZ_CP011058.1|WP_045670993.1|3227366_3229796_+|CRISPR-associated-helicase/endonuclease-Cas3
MDYIAHIRESDKEIQSVEAHLLGVKALAESFGDKIGVKHIAGLAGMLHDMGKYTHEFKEYIREAVNNPDSPPKRGSVDHSTAGAKLLFQKFHQGVPSRLEWILAEVVGNAIISHHSYLHDFLNPHLESPYLNRVQEKHLDEFERSRQCFFDFVISEMEFQQYVSNALVELEAYLSKPSSENGESKLMFLIKFIFSALIDADRTNTRLFEENKIDEPEQSRKELFDAYYQKLMKKINSYQVQEDAKTAINVLRREMSDQCDQFAEKPSGIYTLSIPTGGGKTLASLRYALQHACRENKQHIIYVVPFTTIIEQNAKEVRKILSDDGHILEHHSNVIDDLNDDDENEDGIINTRQKLKLAKDNWDSPIIFTTMVQFLNVFYAKGSRNIRRLHNLSKSVIIFDEVQKVPVSCVSLFNQALNFLNTYCDSSLILCTATQPALGFVELERKLDMNKDAEIIQNLDRVIKAFKRVEIIDKATDELFDNDKLTDFIAEKMDEVQSVLVILNTKTVVKRLYRQMEVSGVPIYHLSTSMCAAHRNHILGQVREHLNQNEKVICISTQLIEAGVDVSFDCVIRSLAGLDSIAQAAGRCNRHGKREIQQVYVIDHAEENLNHLQEIKIGKKLSKRILIDLKRDQNQHGGNILSAQAMDRYFKEFYTEFSSKLNYFIRKLQKDMTELLMSERKHNTYYQAYLHNKKERLPLCIVNSYRTAAEYFQVIDDQTAAVIVPYDEEGKDIIAQLNGNETIENFSGLLRKAQQFTINLFYHEREQLEQNDGVVSLLDGKILALKETAYSKEYGLDLENDGRFDLSMY
>NZ_CP011058.1|WP_045673317.1|3223233_3224211_+|Gfo/Idh/MocA-family-oxidoreductase
MKIGVISLAHMHAVGYMSAINQLEGVELTGIWHDDAEAGGRIAERFGTTFYADFNELIGSGIDAVIVTSENVNHVRHVVAAAEAGKHVLCEKPLATKIEDAQAMIDICRANGVLLQTAFPVRFQTSVKRGKQLLESGKYGNIIAIKGTNRGRIPGGWFLDRNLSGGGAVIDHTVHVVDVMRWYMGAEVTKVYAESASRFSNGLIDDCGMLTMSFDNGVFASLDCSWSRNKKFPTWGDVTLEIVCENGTLSIDAFNQKLNRYSDETGLEWDFWGDDMDLELIRDFVRSIREGKREASVTGEDGLRAVEVALAAYESSESHAVVTLR
>NZ_CP011058.1|WP_045670991.1|3222130_3223120_+|Gfo/Idh/MocA-family-oxidoreductase
MLYVLVIGAGTMGRTHAEAYAAMEGVQLAGIADADLASAEKAARQFGTQEFGSYEEAAESLETIDVVDVCLPTFLHREFVLKAADDGKHVICEKPLAGSLDDARFMIDYCAAKGVRLFVGHVVRFFPEYEKAKRLMEESAIGEVAVAKASRTSGFPRAWNNWYADSSKSGGVLMDLSIHDFDYLRWCFGEVERVFAKSTPPSSSVEGGYALTTLTFRSGVIAHVEGSWSHQKFTTSFEFAGTDGIIDYNSAKDNPIVSFTRTKGEPAGGVPVPESPLLETPYYRELAHFMSCITTGAEPIVTAEDAYQALAISLAAIRSAETGEAVTPG
>NZ_CP011058.1|WP_158453676.1|3220881_3222084_+|GNAT-family-N-acetyltransferase
MARIEIRHVRGRAEMERVYDLLGNVFTVGRAFFQKRLDYDAAYDPETTWVATVEGELAASVQLFPYDMRVGEARLKIGGIGSVSSDPRFRGMGLVHGILLEMTEWMKKREYDLSLLFTGIHPFYEKVGWETVEEPRYELDAASVAGSYDDSVYRISSFSRSDLEEIMAVCDAYNAGNTNSRIRSAEYWDGLLKWSDNLFGSFLTARKKGRIVAYAIAGNEKDGAVELQECAFMDGEGAAMKPLFAALAAGETVKRLSAVIPEDGILSEALRSLGPVDVQIGNYSMWKIIGFAPMLRKLEPVFTRRLVEADEANRAVMPERVLLRCGGEKAVLAIGSHGAAVLPASETLEYDEEIKCTAAEFSAMLTQGSQVLTRESLKGHPVVRALFPGQRYAMWKTEAF
>NZ_CP011058.1|WP_045671001.1|3239635_3240547_-|N-acetylmuramic-acid-6-phosphate-etherase
MNMLSLLTTEQPNANTYNIDQMNAEQIMYLINEEDRHIAEHVRAVIPKVAAAAELVVEAFRKGGRLFYIGAGTSGRLGILDASECPPTFGTDPSMVQGLIAGGFRAMKEPIEGAEDSPEMGAKEVEEHGIGANDVLVGIAASGRTPYVLGAMKRAGELGAVVIGLCNNTDTPMKQYAQLVIDPVVGPEVVLGSTRMKAGTSQKLILNMLTTTSMILMGKVYQNLMVDLNPSNEKLVYRAKRIIHMATGADDVQVEQAFAAADGHVKTAIVMLLTGTGADEAKALLSRSGGFVRSAVELTGSGT
>NZ_CP011058.1|WP_045671002.1|3241028_3242432_+|extracellular-solute-binding-protein
MNELRKSLIALLTALVLVIVTACGSNAGNGGESGSGSTSESTNTGSAEAAKDTITVWTYPVYETYEADLKVLVDDFMKEHPNLTVKTEMLSWAEGPQKFDVALNAGNPPDLYFHAVDGAYASSGLELPIDSYLTPEIKNDYYPGTLELAQVQGVQYGLPLYQFQWGWGGNKRLLEEAGIDWQKIQKEGWTWSEFKAAAAKLTKKLPDGSTQYALTTDGTSLDFIELLTRNNGMPDALDENGKLQWNDNRILDTMTFIQDLMKSGYMPKETAALAPKKRTEMFYAGQTALISKAIPYYDVMIQNRNKDIDAGKVQGEKIDFVLLPVPHNDNAPAKAMMGAEGYLMFKQKKDQGEEHAKNAFLVMEALSGAKAGMASNQLVLPFVRDSQAKEFAGKELGQPANIEASKVMATTMQMPITLKLDNDTSAKMKQFKEQVVKPNMQALFAGEKTPDAILQDFVSKGKLIVGK
>NZ_CP011058.1|WP_045671003.1|3242595_3243519_+|sugar-ABC-transporter-permease
MQTAAAAPTPKRRSSPFGRFVREYGWAYLFILVPVLMFLVFTLYPVISAFVMSFQRYNIMHSTWIGFDNYKALAQNDVFWKSIRNTVIFTIGTVPLNIVITFVLSFFIYQMKNSWQTFFKASLYLPTVASGVTLSVVWLAIFDPTDAGLLNRLLGLFGIDPVIWLGKSGTALFSLMLMNWFGSHGAGIILYLAAMGGIPKSLYEAADIDHASGWSKFYRITWPLLKPTTLYLLVTGVITSFQVFISVYLMTQGGPNFATTTIAYLIYDTAFKFYDFGLASAQSFVLAAIIIIISIVQFKFFSSDVEY
>NZ_CP011058.1|WP_045671004.1|3243573_3244407_+|carbohydrate-ABC-transporter-permease
MKSRSKIVMIVIASVVLAVWAIITVIPLYWMLVGSVQDSSLSATFKPKMIPLQISKAPYDRFFEKTDAWRWLFNSLLVSSILTVTNVFFASLAGYAFAKLKFPGNKSVFWVLLGTMMIPTQVTQIPLYILVINVFNLGDTYTAIILPALVSVGNIFLMKQYMSSLPSSLIHAARIDACGEFGIFWKVILPMAKPGLAVLAIFSFVATWNEFFWPLLVTNSSEMRTIQVGLASFVFAEATDFGGLMAGATIGALPMMILFFSLQRYFLQGITVGAVKG
>NZ_CP011058.1|WP_045671005.1|3244433_3245543_+|sn-glycerol-3-phosphate-ABC-transporter-ATP-binding-protein-UgpC
MARVEFRNVRKQFTDEKKGTFTAVAGSDFVINDKEFVVFVGPSGCGKTTSLRMIAGLERHSSGDILIGDRIVNDLHPKDRDIAMVFQDYALYPHMTIRENLSFGLKNLKKPKAYIEQKVNEAAAILGLEEMLERKPRELSGGQRQRVAVGRAIVRDPQVFLFDEPLSNLDAKLRVQMRVELGELHKRLGATIVYVTHDQVEAMTLGQRIVVMNKGVIQQIASPTELYANPQNMFVAGFIGSPAMNFMDATVAGNKVHVAGAEFTLSDKMAKWLSGYEGKSVVLGIRPEHLFGDDYAPGISGEHQMQADIQVVEHLGSENLLYFHVGSRMVTAKVHPETKAYSGLRKTMYLQFDKVHFFDPQTEQRIEVV
>NZ_CP011058.1|WP_045671006.1|3246408_3247089_+|hypothetical-protein
MKKLNVVLVRSGVEAYREIVSVALYSMISSVVLAFLVMMVPLPFVLALFPLLYMPLVYGVYYAFHRKMSGKRSRVRDIFSGAVKGFVPAVVFGFLMSLLAVIVWSTWWYYGGKDGMIYLALAVFQTYFVAMALASQFYTFQLVLQEEMGIFKAMGESVKLFFRYPGYTIGAFLQMVCVAFLLLLTVVGFFLLFNGLMAIYQHKAAHNVLRTDEPAEDEVVEGQVRA
>NZ_CP011058.1|WP_052703204.1|3248293_3249934_+|beta-N-acetylhexosaminidase
MQLEERIGRMSLRQKIGQMLLCGFHGTEMSGELERFIKEHQIGGVIYFARNVESAAQVAKLSAELQRAAAEADSIPLWVSIDQEGGMVARITEGVALTPGNMAIAAAGSRDAAELLAFISGQELKALGVNLNYAPVLDVNNNPLNPVIGVRSYGESPELAAEYGARAIRGLQNAGVAATAKHFPGHGDTSVDSHLDLPTVLHDRERMERIELVPFKRAIAEGVDAIMSAHIRFPALEPEGLPATLSRTVLKGLLREELGFEGVITTDCMEMNAIASHYGTVEAAVMAVEAGADVVLISHRADLQAGALDAIERAVRDGRLSEARIEQSVKRLLALKAKRGVLAGGGLLPQEPLEAVLARPAHLEAARKVSEDSVTLVRDEAGTLPLKRERTLAITVAAAVMTQVDETFGGGQSLGAALAAGGLDVIDRVVSLKSVEAETAALVAAAEAADVKQIVFGTYNAHFHPAQVELARKLQQLGKPLAAVGLRNPYDLLALPDDAAFVAVYESRPLALQSAAKALLGLIPFRGRLPVSLGERYPAGWGVQRP
>NZ_CP011058.1|WP_148505248.1|3249930_3251118_+|anhydro-N-acetylmuramic-acid-kinase
MMYLFRERKAVTVAGIMSGTSLDGIDVAIVRIEGSGLASRVQLLHYDSVPLASDLRERLKELCTIEQSSVALVCGMNVYMAERFAEAALAAVERSGLTMDDIDLVSSHGQTVWHIPEADAADPYLVRSTLQIGDISVLAKRTGKPVVGDFRPADMAVGGQGAPLVPYGDLILFRDPLKGRLLQNIGGIGNCTALIPNAQPGDVFAFDTGPGNMVIDQTVYLLSEGRFAYDDGGKWAAAGTPDEALVAELMAHPYFTLAPPKSTGREVFGKSYTAEFVGRARQRGLADADIVATATAFTAESIAEGYRRFVFPRCRIDEVIVSGGGARNKALLRMIAQRLPEQRTMTSGSLGIDDDAKEAVIFALLGNDFMHGICNNLPSATGAAVPTVMGKLALP
>NZ_CP011058.1|WP_045671007.1|3251192_3252059_-|carbohydrate-ABC-transporter-permease
MSTRTTSEAAPRPRTSSSRALSVGIAYVLLTAGIAVTVFPLLWMIATSLKHPQDIYTLNIIPTSVTFDNYTAIFQDSPFDKWLLNSLVIAVVTTITVSLFDTAAGYVLAKFSFVGKSFIFVLILSTLMVPTEMLIIPWYLIANDLGLSDTYLGVLFPGIITAFGIFLMRQFMESVPSDLMDAARIDGMNEWRILVRIAIPLVTPAIVTLAILTFISSWNQFIWPLIVLQTPEQFTIPVGIGYFASENKDTSNWLLIMTATTVAIVPLILIFLVFQKQIIRGIAMTGMK
>NZ_CP011058.1|WP_148505249.1|3252077_3252917_-|ABC-transporter-permease-subunit
MLDAARSPSFFISTRFYPILYSFNVSVHEWNMLAKAKPYVGLDNFKTIFQDEIFRKSLFNTALYIVLGVPGQLVSGLVIALLLHNVNRLRGLFRTVYFIPYVTSIVAVSWVFKWILMRNGVLNGWLLDLGFQPQLFLQSPRQALPVIVLSMIWQSIGFQMLVFLTGLQQIPKLYYEAAEIDGAGAWRRFFHITLPLLNPVIVFSAVIATLSYAQSFGQVLNMTGGGPLNSTVSIVLYIYNLAFLQFKMGPASAASVVLFAFILTLTLVQLKVLNRKIDY

Crispr_ID: NZ_CP011058_12

• CRISPR_ID: NZ_CP011058_12
• CRISPR_location: 3238751-3239308
• CRISPR_type: TypeI
• Repeat_type: I-C
• Spacer_info: 8 spacers
• Cas_protein_info: cas2,cas1,cas4,cas7,cas8c,cas5,cas3

Consensus repeat of NZ_CP011058_12

Consensus_repeat	Method
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	CRISPRCasFinder
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	CRT

spacers of NZ_CP011058_12

>12.1|3238783|35|NZ_CP011058|CRISPRCasFinder,CRT
ATCACGCCAAAATCTTGCTCGTATCCCCGAAAGTA
>12.2|3238850|35|NZ_CP011058|CRISPRCasFinder,CRT
GTCGACGCCTTCCGGTTTAAATAACGGTACTGCGA
>12.3|3238917|35|NZ_CP011058|CRISPRCasFinder,CRT
GCGTGAGCATAATAATAATTGTCCAGGTCAACGAC
>12.4|3238984|32|NZ_CP011058|CRISPRCasFinder,CRT
TTGCCTTCCGATCCATCAGCAGCACATATAAG
>12.5|3239048|34|NZ_CP011058|CRISPRCasFinder,CRT
GGGTGTAACTGACTCTTATGCGCGGTTGACTTGG
>12.6|3239114|33|NZ_CP011058|CRISPRCasFinder,CRT
GTGTCAATGATATTGTATTGACCGTAGGAGAAT
>12.7|3239179|34|NZ_CP011058|CRISPRCasFinder,CRT
GTCATCATCGGCTGCTGCCTCATTATCGCCGGCG
>12.8|3239245|32|NZ_CP011058|CRISPRCasFinder
CGCCAAGAGAAAACGTATGCGCGGATCAAAAC

CRISPR arrays and Neighbor proteins around NZ_CP011058_12

CRISPR arrays

The CRISPR arrays of NZ_CP011058_12

>merge|NZ_CP011058|12|3238751-3239308|CRISPRCasFinder,CRT
ATCACATCCCTCGCGGATGCGTGGATTGAAATATCACGCCAAAATCTTGCTCGTATCCCCGAAAGTAGTCGCATCCCTCGCGGATGCGTGGATTGAAATGTCGACGCCTTCCGGTTTAAATAACGGTACTGCGAGTCGCATCCCTCGCGGATGCGTGGATTGAAATGCGTGAGCATAATAATAATTGTCCAGGTCAACGACGTCGCATCCCTCGTGGATGCGTGGATTGAAATTTGCCTTCCGATCCATCAGCAGCACATATAAGGTCGCATCCCTCGCGGATGCGTGGATTGAAATGGGTGTAACTGACTCTTATGCGCGGTTGACTTGGGTCGCATCCCTCGCGGATGCGTGGATTGAAACGTGTCAATGATATTGTATTGACCGTAGGAGAATGTCGCATCCCTCGTGGATGTGTGGATTGAAATGTCATCATCGGCTGCTGCCTCATTATCGCCGGCGATCGCTCCCTTCACGGATGCGTGGATTGAAATCGCCAAGAGAAAACGTATGCGCGGATCAAAACGTCGCATCCCTTAAGAATGCTCATGTTGAAAC

>NZ_CP011058|12|10|3238751-3239308|CRISPRCasFinder
ATCACATCCCTCGCGGATGCGTGGATTGAAAT	ATCACGCCAAAATCTTGCTCGTATCCCCGAAAGTA
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	GTCGACGCCTTCCGGTTTAAATAACGGTACTGCGA
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	GCGTGAGCATAATAATAATTGTCCAGGTCAACGAC
GTCGCATCCCTCGTGGATGCGTGGATTGAAAT	TTGCCTTCCGATCCATCAGCAGCACATATAAG
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	GGGTGTAACTGACTCTTATGCGCGGTTGACTTGG
GTCGCATCCCTCGCGGATGCGTGGATTGAAAC	GTGTCAATGATATTGTATTGACCGTAGGAGAAT
GTCGCATCCCTCGTGGATGTGTGGATTGAAAT	GTCATCATCGGCTGCTGCCTCATTATCGCCGGCG
ATCGCTCCCTTCACGGATGCGTGGATTGAAAT	CGCCAAGAGAAAACGTATGCGCGGATCAAAAC
GTCGCATCCCTTAAGAATGCTCATGTTGAAAC

>NZ_CP011058|12|3|3238751-3239244|CRT
ATCACATCCCTCGCGGATGCGTGGATTGAAAT	ATCACGCCAAAATCTTGCTCGTATCCCCGAAAGTA
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	GTCGACGCCTTCCGGTTTAAATAACGGTACTGCGA
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	GCGTGAGCATAATAATAATTGTCCAGGTCAACGAC
GTCGCATCCCTCGTGGATGCGTGGATTGAAAT	TTGCCTTCCGATCCATCAGCAGCACATATAAG
GTCGCATCCCTCGCGGATGCGTGGATTGAAAT	GGGTGTAACTGACTCTTATGCGCGGTTGACTTGG
GTCGCATCCCTCGCGGATGCGTGGATTGAAAC	GTGTCAATGATATTGTATTGACCGTAGGAGAAT
GTCGCATCCCTCGTGGATGTGTGGATTGAAAT	GTCATCATCGGCTGCTGCCTCATTATCGCCGGCG
ATCGCTCCCTTCACGGATGCGTGGATTGAAAT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011058.1|WP_148505249.1|3252077_3252917_-|ABC-transporter-permease-subunit	unknown	unknown	gnl|CDD|224096
NZ_CP011058.1|WP_045671003.1|3242595_3243519_+|sugar-ABC-transporter-permease	unknown	unknown	gnl|CDD|224096
NZ_CP011058.1|WP_045671005.1|3244433_3245543_+|sn-glycerol-3-phosphate-ABC-transporter-ATP-binding-protein-UgpC	unknown	unknown	gnl|CDD|236947
NZ_CP011058.1|WP_045670998.1|3234054_3235086_+|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl|CDD|188360
NZ_CP011058.1|WP_045670993.1|3227366_3229796_+|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl|CDD|224124
NZ_CP011058.1|WP_045670991.1|3222130_3223120_+|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl|CDD|223745
NZ_CP011058.1|WP_052703204.1|3248293_3249934_+|beta-N-acetylhexosaminidase	unknown	unknown	gnl|CDD|366376
NZ_CP011058.1|WP_158453676.1|3220881_3222084_+|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|379240
NZ_CP011058.1|WP_045671001.1|3239635_3240547_-|N-acetylmuramic-acid-6-phosphate-etherase	unknown	unknown	gnl|CDD|235467
NZ_CP011058.1|WP_148505248.1|3249930_3251118_+|anhydro-N-acetylmuramic-acid-kinase	unknown	unknown	gnl|CDD|236579
NZ_CP011058.1|WP_045671002.1|3241028_3242432_+|extracellular-solute-binding-protein	unknown	unknown	gnl|CDD|270303
NZ_CP011058.1|WP_045670996.1|3232548_3233409_+|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	COG3649_cas7_CAS-I-C	gnl|CDD|187820
NZ_CP011058.1|WP_045671004.1|3243573_3244407_+|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl|CDD|223472
NZ_CP011058.1|WP_045670994.1|3229918_3230638_+|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09752_cas5_CAS-I-C	gnl|CDD|273847
NZ_CP011058.1|WP_045671006.1|3246408_3247089_+|hypothetical-protein	unknown	unknown	gnl|CDD|223550
NZ_CP011058.1|WP_045673318.1|3235096_3235387_+|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl|CDD|187856
NZ_CP011058.1|WP_045670995.1|3230634_3232533_+|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	pfam09709_cas8c_CAS-I-C	gnl|CDD|187887
NZ_CP011058.1|WP_045673317.1|3223233_3224211_+|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl|CDD|223745
NZ_CP011058.1|WP_045670997.1|3233398_3234058_+|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl|CDD|273040
NZ_CP011058.1|WP_045671007.1|3251192_3252059_-|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl|CDD|223472

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_CP011058.1|WP_045670996.1|3232548_3233409_+|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	COG3649_cas7_CAS-I-C	3e-122	402.1	0.1
NZ_CP011058.1|WP_045670995.1|3230634_3232533_+|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	pfam09709_cas8c_CAS-I-C	6.3e-164	541.2	0.9
NZ_CP011058.1|WP_045670994.1|3229918_3230638_+|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09752_cas5_CAS-I-C	1.9e-60	198.8	0.0
NZ_CP011058.1|WP_045670993.1|3227366_3229796_+|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	1e-90	299.8	14.8
NZ_CP011058.1|WP_045673318.1|3235096_3235387_+|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	2.2e-29	96.3	2.1
NZ_CP011058.1|WP_045670998.1|3234054_3235086_+|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	3e-145	478.3	0.0
NZ_CP011058.1|WP_045670997.1|3233398_3234058_+|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	3.5e-34	113.0	1.7

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP011058.1|WP_148505249.1|3252077_3252917_-|ABC-transporter-permease-subunit	gnl|CDD|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	4.5471e-79
NZ_CP011058.1|WP_045671003.1|3242595_3243519_+|sugar-ABC-transporter-permease	gnl|CDD|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	1.97771e-73
NZ_CP011058.1|WP_045671005.1|3244433_3245543_+|sn-glycerol-3-phosphate-ABC-transporter-ATP-binding-protein-UgpC	gnl|CDD|236947	PRK11650, ugpC, sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC.	0
NZ_CP011058.1|WP_045670998.1|3234054_3235086_+|type-I-C-CRISPR-associated-endonuclease-Cas1	gnl|CDD|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	0
NZ_CP011058.1|WP_045670993.1|3227366_3229796_+|CRISPR-associated-helicase/endonuclease-Cas3	gnl|CDD|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	8.75652e-79
NZ_CP011058.1|WP_045670991.1|3222130_3223120_+|Gfo/Idh/MocA-family-oxidoreductase	gnl|CDD|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	3.08934e-73
NZ_CP011058.1|WP_052703204.1|3248293_3249934_+|beta-N-acetylhexosaminidase	gnl|CDD|366376	pfam00933, Glyco_hydro_3, Glycosyl hydrolase family 3 N terminal domain.	3.97021e-102
NZ_CP011058.1|WP_158453676.1|3220881_3222084_+|GNAT-family-N-acetyltransferase	gnl|CDD|379240	pfam13527, Acetyltransf_9, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	4.30672e-21
NZ_CP011058.1|WP_045671001.1|3239635_3240547_-|N-acetylmuramic-acid-6-phosphate-etherase	gnl|CDD|235467	PRK05441, murQ, N-acetylmuramic acid-6-phosphate etherase; Reviewed.	1.76837e-160
NZ_CP011058.1|WP_148505248.1|3249930_3251118_+|anhydro-N-acetylmuramic-acid-kinase	gnl|CDD|236579	PRK09585, anmK, anhydro-N-acetylmuramic acid kinase; Reviewed.	9.3111e-165
NZ_CP011058.1|WP_045671002.1|3241028_3242432_+|extracellular-solute-binding-protein	gnl|CDD|270303	cd13585, PBP2_TMBP_like, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold. This family includes the periplasmic trehalose/maltose-binding component of an ABC transport system and related proteins from archaea and bacteria. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.05932e-41
NZ_CP011058.1|WP_045670996.1|3232548_3233409_+|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl|CDD|187820	cd09689, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas7 is a RAMP superfamily protein; Subunit of the Cascade complex; also known as Csd2 family.	4.41081e-131
NZ_CP011058.1|WP_045671004.1|3243573_3244407_+|carbohydrate-ABC-transporter-permease	gnl|CDD|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	3.08363e-80
NZ_CP011058.1|WP_045670994.1|3229918_3230638_+|type-I-C-CRISPR-associated-protein-Cas5	gnl|CDD|273847	TIGR01876, cas_Cas5d, CRISPR-associated protein Cas5, subtype I-C/DVULG. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This small Cas family is represented by CT1134 of Chlorobium tepidum. This family belongs to a set of several Cas protein families, one each for a number of different CRISPR/Cas subtypes, that share a region of N-terminal sequence similarity modeled by TIGR02593. This family represents the Dvulg subtype of CRISPR/Cas locus.	7.18589e-93
NZ_CP011058.1|WP_045671006.1|3246408_3247089_+|hypothetical-protein	gnl|CDD|223550	COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism].	4.69236e-05
NZ_CP011058.1|WP_045673318.1|3235096_3235387_+|CRISPR-associated-endonuclease-Cas2	gnl|CDD|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	2.61299e-31
NZ_CP011058.1|WP_045670995.1|3230634_3232533_+|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl|CDD|187887	cd09757, Cas8c_I-C, CRISPR/Cas system-associated protein Cas8c. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Zn-finger domain containing protein, distant homologs of Cas8 proteins; signature gene for I-C subtype; also known as Csd1 family.	1.41658e-176
NZ_CP011058.1|WP_045673317.1|3223233_3224211_+|Gfo/Idh/MocA-family-oxidoreductase	gnl|CDD|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	1.40563e-66
NZ_CP011058.1|WP_045670997.1|3233398_3234058_+|CRISPR-associated-protein-Cas4	gnl|CDD|273040	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4. This model represents a family of proteins associated with CRISPR repeats in a wide set of prokaryotic genomes. This scope of this model has been broadened since it was first built to describe an archaeal subset only. The function of the protein is undefined. Distantly related proteins, excluded from this model, include ORFs from Mycobacteriophage D29 and Sulfolobus islandicus filamentous virus and a region of the Schizosaccharomyces pombe DNA replication helicase Dna2p.	3.8957e-26
NZ_CP011058.1|WP_045671007.1|3251192_3252059_-|carbohydrate-ABC-transporter-permease	gnl|CDD|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	7.31584e-80

Protein sequences

>NZ_CP011058.1|WP_045673318.1|3235096_3235387_+|CRISPR-associated-endonuclease-Cas2
MLVLVTYDVSTVSSEGQRRLRQVSKICQNYGQRVQNSVFECVVDAAQFAVLKLKLLDVIDQEQDSLRFYQLGNNYKKKVEHLGVKQSIDLEGPLIL
>NZ_CP011058.1|WP_045670998.1|3234054_3235086_+|type-I-C-CRISPR-associated-endonuclease-Cas1
MKKLLNTLYITQPDVYLSLDGDNIVLLKEQENLGRLPLHNLESIITFGYTGASPALMGYCAERNIQLVFFTKNGRFLARVIGESKGNVVLRKKQYAVSEDEILSAKVARNFIVGKIYNHKWIIERMTRDYALRIDVPLFKAISQQLSALILDVRACEDLERLRGLEGQAAISYNKLFDPMILQQKEDFYFHSRSRRPPLDNVNAMLSFAYSLLANDVASALEGVGLDAYVGFLHRDRPGRASLALDVMEELRGVFADKFVLTLINKKIVSKEDFLKKENGAVIMMDEARKKFLTAWQNKKQEKITHPFLGEKISWGLVPHAQALLLARYLRNDLDEYPPFFWK
>NZ_CP011058.1|WP_045670997.1|3233398_3234058_+|CRISPR-associated-protein-Cas4
MDYNEDDHYLMLSGIQHFQFCKRQWALIHIEQQWEENVRTIEGEHLHRNADQPFTREKRGDKLIVRAMPVKSESLKITGVCDVVEFIKNDSGVEINGADGKYIAYPIEYKRGKPKMNDEDILQLAAQAICLEEMLLCEIDVGYMFYNEIKHRVEVPLTSAIKNKVKLIVAEMQDYYNRRYTPKVKTGSFCRNCSLQNICLPELMNKRSVKSYVEGKLKE
>NZ_CP011058.1|WP_045670996.1|3232548_3233409_+|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MSTLDHKIDFAVVLSVTKANPNGDPLNGNRPRQNYDGYGEISDVALKRKIRNRLQDMGESIFVQSNDRKTDSYGSLRERADANAELEKILKSKSGSSDEFSSIACREWLDVRSFGQVFAFKADKGAGVSVGIRGPVSIHTATSIDPIDISSMQITKSVNSEPGASRGSDTMGMKHRVDSGVYIFFGSINTQLAEKTGFTNEDAEKFKNALVTLFENDASSARPEGSMEVHKVYWWEHNSKLGQYSSAKVHRSLSFERLAEEPNAFEDYEFFIQPLEGLKVEIINGL
>NZ_CP011058.1|WP_045670995.1|3230634_3232533_+|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MSWLLNLYETYESNLDLVGKIEKKHNEQEYTLLPVSHTTQNAHIEVEITEDGEFHSATVIDKSDASTLIPCTEDSASRAGAKIAPYPLHDKLSYVAGDYAAYGGEIKKEEPFPYYIKQLEDWANSPYAVANVKSIYRYLSKGRLIQDLVKEKILYLDAKNRLLDKWDKDAESLYGARPRIFSVIAGEQASAFVRFNVYSPTKMLTKVWKDQEMYDSFVRFYNSKLGDEDLCYVTGRTLPATDKHANKIRNAADKAKLISANDTSGFTFRGRFNQSHEAASISYEVSQKAHNALKWLINHQGKMIDQRVFLVWGNDELDIPGFTEDYFSIDPTPVATKERISFTNKEFAIEVAKALDGYRNQLSSSSNGKANVNILVLDSATTGRMAVLYYRNMDKELYLDKLVKWHSTCAWLHQYRKDDNGNFVRFYGAPATKDIAFAAYGPRASDKIVKGLMERMLPCMIDGRKIPSDVVASAFRRASNPVSMEKWEWEKTLSITCALISKEQEGFNVALDKENNDRNYLFGRLLAVADVLERRALGDEERATNAIRYMNAFSRHPERTWKTIQACLQPYQARLGTKAIYWAKIIDEVASRIPADKFNNKPLSGLYLLGFYSQRHELYQKKETNETTEESI
>NZ_CP011058.1|WP_045670994.1|3229918_3230638_+|type-I-C-CRISPR-associated-protein-Cas5
MRNAIEFIVYGDYALFTDPLTKLGGEKLSYQVPTYQALKGILESIYWKTALLMVVDEVRIMNPIRMESKGIRPMDYGGGNTLANYTYLRDPKYQVRAHFEFNMNRTDMAYDRNENKHHSILRRSLKVGGRRDIFLGARECQAYVEPCIFGEEDGFYDDYGDIHLGSMVHGLNYPDETGRDQLEIRLWNPVMKDGIIQFIRPEQCTQVRTIMDMEPKRFDDTSVLSADDLLSQLEEGGSP
>NZ_CP011058.1|WP_045670993.1|3227366_3229796_+|CRISPR-associated-helicase/endonuclease-Cas3
MDYIAHIRESDKEIQSVEAHLLGVKALAESFGDKIGVKHIAGLAGMLHDMGKYTHEFKEYIREAVNNPDSPPKRGSVDHSTAGAKLLFQKFHQGVPSRLEWILAEVVGNAIISHHSYLHDFLNPHLESPYLNRVQEKHLDEFERSRQCFFDFVISEMEFQQYVSNALVELEAYLSKPSSENGESKLMFLIKFIFSALIDADRTNTRLFEENKIDEPEQSRKELFDAYYQKLMKKINSYQVQEDAKTAINVLRREMSDQCDQFAEKPSGIYTLSIPTGGGKTLASLRYALQHACRENKQHIIYVVPFTTIIEQNAKEVRKILSDDGHILEHHSNVIDDLNDDDENEDGIINTRQKLKLAKDNWDSPIIFTTMVQFLNVFYAKGSRNIRRLHNLSKSVIIFDEVQKVPVSCVSLFNQALNFLNTYCDSSLILCTATQPALGFVELERKLDMNKDAEIIQNLDRVIKAFKRVEIIDKATDELFDNDKLTDFIAEKMDEVQSVLVILNTKTVVKRLYRQMEVSGVPIYHLSTSMCAAHRNHILGQVREHLNQNEKVICISTQLIEAGVDVSFDCVIRSLAGLDSIAQAAGRCNRHGKREIQQVYVIDHAEENLNHLQEIKIGKKLSKRILIDLKRDQNQHGGNILSAQAMDRYFKEFYTEFSSKLNYFIRKLQKDMTELLMSERKHNTYYQAYLHNKKERLPLCIVNSYRTAAEYFQVIDDQTAAVIVPYDEEGKDIIAQLNGNETIENFSGLLRKAQQFTINLFYHEREQLEQNDGVVSLLDGKILALKETAYSKEYGLDLENDGRFDLSMY
>NZ_CP011058.1|WP_045673317.1|3223233_3224211_+|Gfo/Idh/MocA-family-oxidoreductase
MKIGVISLAHMHAVGYMSAINQLEGVELTGIWHDDAEAGGRIAERFGTTFYADFNELIGSGIDAVIVTSENVNHVRHVVAAAEAGKHVLCEKPLATKIEDAQAMIDICRANGVLLQTAFPVRFQTSVKRGKQLLESGKYGNIIAIKGTNRGRIPGGWFLDRNLSGGGAVIDHTVHVVDVMRWYMGAEVTKVYAESASRFSNGLIDDCGMLTMSFDNGVFASLDCSWSRNKKFPTWGDVTLEIVCENGTLSIDAFNQKLNRYSDETGLEWDFWGDDMDLELIRDFVRSIREGKREASVTGEDGLRAVEVALAAYESSESHAVVTLR
>NZ_CP011058.1|WP_045670991.1|3222130_3223120_+|Gfo/Idh/MocA-family-oxidoreductase
MLYVLVIGAGTMGRTHAEAYAAMEGVQLAGIADADLASAEKAARQFGTQEFGSYEEAAESLETIDVVDVCLPTFLHREFVLKAADDGKHVICEKPLAGSLDDARFMIDYCAAKGVRLFVGHVVRFFPEYEKAKRLMEESAIGEVAVAKASRTSGFPRAWNNWYADSSKSGGVLMDLSIHDFDYLRWCFGEVERVFAKSTPPSSSVEGGYALTTLTFRSGVIAHVEGSWSHQKFTTSFEFAGTDGIIDYNSAKDNPIVSFTRTKGEPAGGVPVPESPLLETPYYRELAHFMSCITTGAEPIVTAEDAYQALAISLAAIRSAETGEAVTPG
>NZ_CP011058.1|WP_158453676.1|3220881_3222084_+|GNAT-family-N-acetyltransferase
MARIEIRHVRGRAEMERVYDLLGNVFTVGRAFFQKRLDYDAAYDPETTWVATVEGELAASVQLFPYDMRVGEARLKIGGIGSVSSDPRFRGMGLVHGILLEMTEWMKKREYDLSLLFTGIHPFYEKVGWETVEEPRYELDAASVAGSYDDSVYRISSFSRSDLEEIMAVCDAYNAGNTNSRIRSAEYWDGLLKWSDNLFGSFLTARKKGRIVAYAIAGNEKDGAVELQECAFMDGEGAAMKPLFAALAAGETVKRLSAVIPEDGILSEALRSLGPVDVQIGNYSMWKIIGFAPMLRKLEPVFTRRLVEADEANRAVMPERVLLRCGGEKAVLAIGSHGAAVLPASETLEYDEEIKCTAAEFSAMLTQGSQVLTRESLKGHPVVRALFPGQRYAMWKTEAF
>NZ_CP011058.1|WP_045671001.1|3239635_3240547_-|N-acetylmuramic-acid-6-phosphate-etherase
MNMLSLLTTEQPNANTYNIDQMNAEQIMYLINEEDRHIAEHVRAVIPKVAAAAELVVEAFRKGGRLFYIGAGTSGRLGILDASECPPTFGTDPSMVQGLIAGGFRAMKEPIEGAEDSPEMGAKEVEEHGIGANDVLVGIAASGRTPYVLGAMKRAGELGAVVIGLCNNTDTPMKQYAQLVIDPVVGPEVVLGSTRMKAGTSQKLILNMLTTTSMILMGKVYQNLMVDLNPSNEKLVYRAKRIIHMATGADDVQVEQAFAAADGHVKTAIVMLLTGTGADEAKALLSRSGGFVRSAVELTGSGT
>NZ_CP011058.1|WP_045671002.1|3241028_3242432_+|extracellular-solute-binding-protein
MNELRKSLIALLTALVLVIVTACGSNAGNGGESGSGSTSESTNTGSAEAAKDTITVWTYPVYETYEADLKVLVDDFMKEHPNLTVKTEMLSWAEGPQKFDVALNAGNPPDLYFHAVDGAYASSGLELPIDSYLTPEIKNDYYPGTLELAQVQGVQYGLPLYQFQWGWGGNKRLLEEAGIDWQKIQKEGWTWSEFKAAAAKLTKKLPDGSTQYALTTDGTSLDFIELLTRNNGMPDALDENGKLQWNDNRILDTMTFIQDLMKSGYMPKETAALAPKKRTEMFYAGQTALISKAIPYYDVMIQNRNKDIDAGKVQGEKIDFVLLPVPHNDNAPAKAMMGAEGYLMFKQKKDQGEEHAKNAFLVMEALSGAKAGMASNQLVLPFVRDSQAKEFAGKELGQPANIEASKVMATTMQMPITLKLDNDTSAKMKQFKEQVVKPNMQALFAGEKTPDAILQDFVSKGKLIVGK
>NZ_CP011058.1|WP_045671003.1|3242595_3243519_+|sugar-ABC-transporter-permease
MQTAAAAPTPKRRSSPFGRFVREYGWAYLFILVPVLMFLVFTLYPVISAFVMSFQRYNIMHSTWIGFDNYKALAQNDVFWKSIRNTVIFTIGTVPLNIVITFVLSFFIYQMKNSWQTFFKASLYLPTVASGVTLSVVWLAIFDPTDAGLLNRLLGLFGIDPVIWLGKSGTALFSLMLMNWFGSHGAGIILYLAAMGGIPKSLYEAADIDHASGWSKFYRITWPLLKPTTLYLLVTGVITSFQVFISVYLMTQGGPNFATTTIAYLIYDTAFKFYDFGLASAQSFVLAAIIIIISIVQFKFFSSDVEY
>NZ_CP011058.1|WP_045671004.1|3243573_3244407_+|carbohydrate-ABC-transporter-permease
MKSRSKIVMIVIASVVLAVWAIITVIPLYWMLVGSVQDSSLSATFKPKMIPLQISKAPYDRFFEKTDAWRWLFNSLLVSSILTVTNVFFASLAGYAFAKLKFPGNKSVFWVLLGTMMIPTQVTQIPLYILVINVFNLGDTYTAIILPALVSVGNIFLMKQYMSSLPSSLIHAARIDACGEFGIFWKVILPMAKPGLAVLAIFSFVATWNEFFWPLLVTNSSEMRTIQVGLASFVFAEATDFGGLMAGATIGALPMMILFFSLQRYFLQGITVGAVKG
>NZ_CP011058.1|WP_045671005.1|3244433_3245543_+|sn-glycerol-3-phosphate-ABC-transporter-ATP-binding-protein-UgpC
MARVEFRNVRKQFTDEKKGTFTAVAGSDFVINDKEFVVFVGPSGCGKTTSLRMIAGLERHSSGDILIGDRIVNDLHPKDRDIAMVFQDYALYPHMTIRENLSFGLKNLKKPKAYIEQKVNEAAAILGLEEMLERKPRELSGGQRQRVAVGRAIVRDPQVFLFDEPLSNLDAKLRVQMRVELGELHKRLGATIVYVTHDQVEAMTLGQRIVVMNKGVIQQIASPTELYANPQNMFVAGFIGSPAMNFMDATVAGNKVHVAGAEFTLSDKMAKWLSGYEGKSVVLGIRPEHLFGDDYAPGISGEHQMQADIQVVEHLGSENLLYFHVGSRMVTAKVHPETKAYSGLRKTMYLQFDKVHFFDPQTEQRIEVV
>NZ_CP011058.1|WP_045671006.1|3246408_3247089_+|hypothetical-protein
MKKLNVVLVRSGVEAYREIVSVALYSMISSVVLAFLVMMVPLPFVLALFPLLYMPLVYGVYYAFHRKMSGKRSRVRDIFSGAVKGFVPAVVFGFLMSLLAVIVWSTWWYYGGKDGMIYLALAVFQTYFVAMALASQFYTFQLVLQEEMGIFKAMGESVKLFFRYPGYTIGAFLQMVCVAFLLLLTVVGFFLLFNGLMAIYQHKAAHNVLRTDEPAEDEVVEGQVRA
>NZ_CP011058.1|WP_052703204.1|3248293_3249934_+|beta-N-acetylhexosaminidase
MQLEERIGRMSLRQKIGQMLLCGFHGTEMSGELERFIKEHQIGGVIYFARNVESAAQVAKLSAELQRAAAEADSIPLWVSIDQEGGMVARITEGVALTPGNMAIAAAGSRDAAELLAFISGQELKALGVNLNYAPVLDVNNNPLNPVIGVRSYGESPELAAEYGARAIRGLQNAGVAATAKHFPGHGDTSVDSHLDLPTVLHDRERMERIELVPFKRAIAEGVDAIMSAHIRFPALEPEGLPATLSRTVLKGLLREELGFEGVITTDCMEMNAIASHYGTVEAAVMAVEAGADVVLISHRADLQAGALDAIERAVRDGRLSEARIEQSVKRLLALKAKRGVLAGGGLLPQEPLEAVLARPAHLEAARKVSEDSVTLVRDEAGTLPLKRERTLAITVAAAVMTQVDETFGGGQSLGAALAAGGLDVIDRVVSLKSVEAETAALVAAAEAADVKQIVFGTYNAHFHPAQVELARKLQQLGKPLAAVGLRNPYDLLALPDDAAFVAVYESRPLALQSAAKALLGLIPFRGRLPVSLGERYPAGWGVQRP
>NZ_CP011058.1|WP_148505248.1|3249930_3251118_+|anhydro-N-acetylmuramic-acid-kinase
MMYLFRERKAVTVAGIMSGTSLDGIDVAIVRIEGSGLASRVQLLHYDSVPLASDLRERLKELCTIEQSSVALVCGMNVYMAERFAEAALAAVERSGLTMDDIDLVSSHGQTVWHIPEADAADPYLVRSTLQIGDISVLAKRTGKPVVGDFRPADMAVGGQGAPLVPYGDLILFRDPLKGRLLQNIGGIGNCTALIPNAQPGDVFAFDTGPGNMVIDQTVYLLSEGRFAYDDGGKWAAAGTPDEALVAELMAHPYFTLAPPKSTGREVFGKSYTAEFVGRARQRGLADADIVATATAFTAESIAEGYRRFVFPRCRIDEVIVSGGGARNKALLRMIAQRLPEQRTMTSGSLGIDDDAKEAVIFALLGNDFMHGICNNLPSATGAAVPTVMGKLALP
>NZ_CP011058.1|WP_045671007.1|3251192_3252059_-|carbohydrate-ABC-transporter-permease
MSTRTTSEAAPRPRTSSSRALSVGIAYVLLTAGIAVTVFPLLWMIATSLKHPQDIYTLNIIPTSVTFDNYTAIFQDSPFDKWLLNSLVIAVVTTITVSLFDTAAGYVLAKFSFVGKSFIFVLILSTLMVPTEMLIIPWYLIANDLGLSDTYLGVLFPGIITAFGIFLMRQFMESVPSDLMDAARIDGMNEWRILVRIAIPLVTPAIVTLAILTFISSWNQFIWPLIVLQTPEQFTIPVGIGYFASENKDTSNWLLIMTATTVAIVPLILIFLVFQKQIIRGIAMTGMK
>NZ_CP011058.1|WP_148505249.1|3252077_3252917_-|ABC-transporter-permease-subunit
MLDAARSPSFFISTRFYPILYSFNVSVHEWNMLAKAKPYVGLDNFKTIFQDEIFRKSLFNTALYIVLGVPGQLVSGLVIALLLHNVNRLRGLFRTVYFIPYVTSIVAVSWVFKWILMRNGVLNGWLLDLGFQPQLFLQSPRQALPVIVLSMIWQSIGFQMLVFLTGLQQIPKLYYEAAEIDGAGAWRRFFHITLPLLNPVIVFSAVIATLSYAQSFGQVLNMTGGGPLNSTVSIVLYIYNLAFLQFKMGPASAASVVLFAFILTLTLVQLKVLNRKIDY

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP011058_3	3.1|881975|34|NZ_CP011058|PILER-CR	881975-882008	34	NZ_CP011058.1	2312008-2312041	0	1.0
NZ_CP011058_3	3.2|882031|29|NZ_CP011058|PILER-CR	882031-882059	29	NZ_CP011058.1	767462-767490	0	1.0
NZ_CP011058_3	3.2|882031|29|NZ_CP011058|PILER-CR	882031-882059	29	NZ_CP011058.1	2741694-2741722	0	1.0
NZ_CP011058_3	3.1|881975|34|NZ_CP011058|PILER-CR	881975-882008	34	NZ_CP011058.1	5511282-5511315	1	0.971
NZ_CP011058_3	3.2|882031|29|NZ_CP011058|PILER-CR	882031-882059	29	NZ_CP011058.1	1857396-1857424	1	0.966
NZ_CP011058_3	3.2|882031|29|NZ_CP011058|PILER-CR	882031-882059	29	NZ_CP011058.1	2311957-2311985	1	0.966
NZ_CP011058_9	9.1|3152106|27|NZ_CP011058|CRISPRCasFinder	3152106-3152132	27	NZ_CP011058.1	1119596-1119622	1	0.963
NZ_CP011058_3	3.2|882031|29|NZ_CP011058|PILER-CR	882031-882059	29	NZ_CP011058.1	5511231-5511259	2	0.931
NZ_CP011058_8	8.1|2942640|28|NZ_CP011058|CRISPRCasFinder	2942640-2942667	28	NZ_CP011058.1	1014845-1014872	2	0.929
NZ_CP011058_9	9.1|3152106|27|NZ_CP011058|CRISPRCasFinder	3152106-3152132	27	NZ_CP011058.1	4024199-4024225	2	0.926

1. spacer 3.1|881975|34|NZ_CP011058|PILER-CR matches to position: 2312008-2312041, mismatch: 0, identity: 1.0

cataatgagcggcacacacaccgaatcagtcgat	CRISPR spacer
cataatgagcggcacacacaccgaatcagtcgat	Protospacer
**********************************

2. spacer 3.2|882031|29|NZ_CP011058|PILER-CR matches to position: 767462-767490, mismatch: 0, identity: 1.0

aaacgtgatttgagccctgattctgtata	CRISPR spacer
aaacgtgatttgagccctgattctgtata	Protospacer
*****************************

3. spacer 3.2|882031|29|NZ_CP011058|PILER-CR matches to position: 2741694-2741722, mismatch: 0, identity: 1.0

aaacgtgatttgagccctgattctgtata	CRISPR spacer
aaacgtgatttgagccctgattctgtata	Protospacer
*****************************

4. spacer 3.1|881975|34|NZ_CP011058|PILER-CR matches to position: 5511282-5511315, mismatch: 1, identity: 0.971

cataatgagcggcacacacaccgaatcagtcgat	CRISPR spacer
cataatgagcgggacacacaccgaatcagtcgat	Protospacer
************ *********************

5. spacer 3.2|882031|29|NZ_CP011058|PILER-CR matches to position: 1857396-1857424, mismatch: 1, identity: 0.966

aaacgtgatttgagccctgattctgtata	CRISPR spacer
aaacgtgatttgagccctgattttgtata	Protospacer
**********************.******

6. spacer 3.2|882031|29|NZ_CP011058|PILER-CR matches to position: 2311957-2311985, mismatch: 1, identity: 0.966

aaacgtgatttgagccctgattctgtata	CRISPR spacer
aaatgtgatttgagccctgattctgtata	Protospacer
***.*************************

7. spacer 9.1|3152106|27|NZ_CP011058|CRISPRCasFinder matches to position: 1119596-1119622, mismatch: 1, identity: 0.963

tttccaaatgggctcataaatgcaaaa	CRISPR spacer
tttccaaatgggctcatacatgcaaaa	Protospacer
****************** ********

8. spacer 3.2|882031|29|NZ_CP011058|PILER-CR matches to position: 5511231-5511259, mismatch: 2, identity: 0.931

aaacgtgatttgagccctgattctgtata	CRISPR spacer
aaacgtgacttgaaccctgattctgtata	Protospacer
********.****.***************

9. spacer 8.1|2942640|28|NZ_CP011058|CRISPRCasFinder matches to position: 1014845-1014872, mismatch: 2, identity: 0.929

aagtttttgtgaagcttgcctgcatgct	CRISPR spacer
aagtttttgtgaagcttggctgcttgct	Protospacer
****************** **** ****

10. spacer 9.1|3152106|27|NZ_CP011058|CRISPRCasFinder matches to position: 4024199-4024225, mismatch: 2, identity: 0.926

tttccaaatgggctcataaatgcaaaa	CRISPR spacer
tttccaaatgggctcataaaatcaaaa	Protospacer
********************  *****

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP011058_8	8.1|2942640|28|NZ_CP011058|CRISPRCasFinder	2942640-2942667	28	NC_014533	Gloeothece verrucosa PCC 7822 plasmid Cy782201, complete sequence	163769-163796	3	0.893
NZ_CP011058_9	9.1|3152106|27|NZ_CP011058|CRISPRCasFinder	3152106-3152132	27	AP019515	Halomonas sulfidaeris ATCC BAA-803 plasmid pBAA-803-A DNA, complete genome	205941-205967	6	0.778
NZ_CP011058_9	9.1|3152106|27|NZ_CP011058|CRISPRCasFinder	3152106-3152132	27	NZ_CP011053	Halomonas sp. KO116 plasmid unnamed1, complete sequence	256352-256378	6	0.778
NZ_CP011058_11	11.14|3236454|35|NZ_CP011058|PILER-CR,CRISPRCasFinder,CRT	3236454-3236488	35	NZ_CP037443	Klebsiella sp. PO552 plasmid p2, complete sequence	82093-82127	8	0.771
NZ_CP011058_11	11.17|3236652|33|NZ_CP011058|PILER-CR,CRISPRCasFinder,CRT	3236652-3236684	33	MK448839	Streptococcus phage Javan102, complete genome	37235-37267	8	0.758
NZ_CP011058_11	11.17|3236652|33|NZ_CP011058|PILER-CR,CRISPRCasFinder,CRT	3236652-3236684	33	MK448667	Streptococcus phage Javan105, complete genome	37235-37267	8	0.758
NZ_CP011058_11	11.17|3236652|33|NZ_CP011058|PILER-CR,CRISPRCasFinder,CRT	3236652-3236684	33	MK448843	Streptococcus phage Javan112, complete genome	37233-37265	8	0.758
NZ_CP011058_11	11.17|3236652|33|NZ_CP011058|PILER-CR,CRISPRCasFinder,CRT	3236652-3236684	33	MK448841	Streptococcus phage Javan108, complete genome	37235-37267	8	0.758
NZ_CP011058_12	12.8|3239245|32|NZ_CP011058|CRISPRCasFinder	3239245-3239276	32	NZ_KX388535	Agrobacterium tumefaciens strain EU6 plasmid pTiEU6, complete sequence	152465-152496	8	0.75
NZ_CP011058_12	12.8|3239245|32|NZ_CP011058|CRISPRCasFinder	3239245-3239276	32	NZ_KY000059	Agrobacterium tumefaciens strain CFBP1898 plasmid pTi_CFBP1898, complete sequence	162607-162638	8	0.75
NZ_CP011058_12	12.8|3239245|32|NZ_CP011058|CRISPRCasFinder	3239245-3239276	32	KY000034	Agrobacterium sp. strain C58PMP90 plasmid pTi_C58PMP90, complete sequence	157456-157487	8	0.75
NZ_CP011058_12	12.8|3239245|32|NZ_CP011058|CRISPRCasFinder	3239245-3239276	32	KY000036	Agrobacterium sp. strain GV3101 plasmid pTi_GV3101, complete sequence	158721-158752	8	0.75
NZ_CP011058_12	12.8|3239245|32|NZ_CP011058|CRISPRCasFinder	3239245-3239276	32	NZ_CP042277	Agrobacterium tumefaciens strain 186 plasmid pTi, complete sequence	100137-100168	8	0.75
NZ_CP011058_12	12.8|3239245|32|NZ_CP011058|CRISPRCasFinder	3239245-3239276	32	NZ_CP032929	Agrobacterium tumefaciens strain 1D1460 plasmid pTi1D1460, complete sequence	137734-137765	8	0.75
NZ_CP011058_12	12.8|3239245|32|NZ_CP011058|CRISPRCasFinder	3239245-3239276	32	NZ_CP039927	Agrobacterium tumefaciens strain CFBP7129 plasmid pTiCFBP7129, complete sequence	109348-109379	8	0.75
NZ_CP011058_12	12.8|3239245|32|NZ_CP011058|CRISPRCasFinder	3239245-3239276	32	NC_002147	Agrobacterium tumefaciens MAFF301001 plasmid pTi-SAKURA, complete sequence	147025-147056	8	0.75
NZ_CP011058_12	12.8|3239245|32|NZ_CP011058|CRISPRCasFinder	3239245-3239276	32	NZ_CP032925	Agrobacterium tumefaciens strain 1D1108 plasmid pTi1D1108, complete sequence	98773-98804	8	0.75
NZ_CP011058_12	12.8|3239245|32|NZ_CP011058|CRISPRCasFinder	3239245-3239276	32	NZ_CP030831	Neorhizobium sp. NCHU2750 plasmid pTiNCHU2750, complete sequence	198966-198997	8	0.75
NZ_CP011058_12	12.8|3239245|32|NZ_CP011058|CRISPRCasFinder	3239245-3239276	32	NZ_CP033026	Agrobacterium fabrum strain 1D132 plasmid pTi1D132, complete sequence	99777-99808	8	0.75
NZ_CP011058_12	12.8|3239245|32|NZ_CP011058|CRISPRCasFinder	3239245-3239276	32	NC_003065	Agrobacterium fabrum str. C58 plasmid Ti, complete sequence	190326-190357	8	0.75
NZ_CP011058_12	12.8|3239245|32|NZ_CP011058|CRISPRCasFinder	3239245-3239276	32	NZ_MK439382	Agrobacterium tumefaciens strain CFBP2178 plasmid pTiCFBP2178, complete sequence	194323-194354	8	0.75
NZ_CP011058_12	12.8|3239245|32|NZ_CP011058|CRISPRCasFinder	3239245-3239276	32	NZ_MK439383	Agrobacterium tumefaciens strain CFBP1935 plasmid pTiCFBP1935, complete sequence	189594-189625	8	0.75
NZ_CP011058_12	12.8|3239245|32|NZ_CP011058|CRISPRCasFinder	3239245-3239276	32	NZ_MK439386	Agrobacterium tumefaciens strain T37 plasmid pTiT37, complete sequence	179872-179903	8	0.75
NZ_CP011058_12	12.8|3239245|32|NZ_CP011058|CRISPRCasFinder	3239245-3239276	32	NZ_MK318986	Agrobacterium rhizogenes strain C6.5 plasmid pTiC6.5, complete sequence	143212-143243	8	0.75
NZ_CP011058_12	12.8|3239245|32|NZ_CP011058|CRISPRCasFinder	3239245-3239276	32	NZ_MK439385	Agrobacterium tumefaciens strain Kerr27 plasmid pTiKerr27, complete sequence	219919-219950	8	0.75
NZ_CP011058_12	12.8|3239245|32|NZ_CP011058|CRISPRCasFinder	3239245-3239276	32	NZ_MK439384	Agrobacterium tumefaciens strain Kerr108 plasmid pTiKerr108, complete sequence	196809-196840	8	0.75
NZ_CP011058_12	12.8|3239245|32|NZ_CP011058|CRISPRCasFinder	3239245-3239276	32	NZ_MK439381	Agrobacterium tumefaciens strain Sule1 plasmid pTiSule1, complete sequence	194322-194353	8	0.75
NZ_CP011058_12	12.8|3239245|32|NZ_CP011058|CRISPRCasFinder	3239245-3239276	32	NZ_MF511177	Agrobacterium rhizogenes strain C5.7 plasmid pTiC5.7, complete sequence	143212-143243	8	0.75
NZ_CP011058_12	12.8|3239245|32|NZ_CP011058|CRISPRCasFinder	3239245-3239276	32	NZ_KY000039	Agrobacterium deltaense strain Tun180 plasmid pTi_Tun180, complete sequence	168525-168556	8	0.75
NZ_CP011058_12	12.8|3239245|32|NZ_CP011058|CRISPRCasFinder	3239245-3239276	32	NZ_KY000064	Agrobacterium tumefaciens strain CFBP7126 plasmid pTi_CFBP7126, complete sequence	106850-106881	8	0.75
NZ_CP011058_12	12.8|3239245|32|NZ_CP011058|CRISPRCasFinder	3239245-3239276	32	NZ_KY000069	Agrobacterium deltaense strain Tun176 plasmid pTi_Tun176, complete sequence	146034-146065	8	0.75
NZ_CP011058_12	12.8|3239245|32|NZ_CP011058|CRISPRCasFinder	3239245-3239276	32	NZ_KY000058	Agrobacterium rhizogenes strain CFBP1317 plasmid pTi_CFBP1317, complete sequence	161473-161504	8	0.75
NZ_CP011058_12	12.8|3239245|32|NZ_CP011058|CRISPRCasFinder	3239245-3239276	32	NZ_KY000068	Agrobacterium deltaense strain Tun151 plasmid pTi_Tun151, complete sequence	160526-160557	8	0.75
NZ_CP011058_12	12.8|3239245|32|NZ_CP011058|CRISPRCasFinder	3239245-3239276	32	NZ_KY000070	Agrobacterium tumefaciens strain Tun178 plasmid pTi_Tun178, complete sequence	76674-76705	8	0.75
NZ_CP011058_12	12.8|3239245|32|NZ_CP011058|CRISPRCasFinder	3239245-3239276	32	NZ_KY000027	Agrobacterium rhizogenes strain CFBP2692 plasmid pTi_CFBP2692, complete sequence	173239-173270	8	0.75
NZ_CP011058_12	12.8|3239245|32|NZ_CP011058|CRISPRCasFinder	3239245-3239276	32	NZ_KY000031	Agrobacterium genomosp. 1 strain Tun198 plasmid pTi_Tun198, complete sequence	61726-61757	8	0.75
NZ_CP011058_12	12.8|3239245|32|NZ_CP011058|CRISPRCasFinder	3239245-3239276	32	NZ_KY000041	Agrobacterium tumefaciens strain CFBP296 plasmid pTi_CFBP296, complete sequence	201659-201690	8	0.75
NZ_CP011058_12	12.8|3239245|32|NZ_CP011058|CRISPRCasFinder	3239245-3239276	32	NZ_KY000065	Agrobacterium tumefaciens strain CFBP7128 plasmid pTi_CFBP7128, complete sequence	113969-114000	8	0.75
NZ_CP011058_12	12.8|3239245|32|NZ_CP011058|CRISPRCasFinder	3239245-3239276	32	NZ_KY000028	Agrobacterium genomosp. 1 strain CFBP2712 plasmid pTi_CFBP2712, complete sequence	151773-151804	8	0.75
NZ_CP011058_12	12.8|3239245|32|NZ_CP011058|CRISPRCasFinder	3239245-3239276	32	NZ_KY000066	Agrobacterium deltaense strain CFBP7129 plasmid pTi_CFBP7129, complete sequence	117988-118019	8	0.75
NZ_CP011058_12	12.8|3239245|32|NZ_CP011058|CRISPRCasFinder	3239245-3239276	32	NZ_KY000044	Agrobacterium fabrum strain CFBP1933 plasmid pTi_CFBP1933, complete sequence	135955-135986	8	0.75
NZ_CP011058_12	12.8|3239245|32|NZ_CP011058|CRISPRCasFinder	3239245-3239276	32	NZ_KY000050	Agrobacterium tumefaciens strain CFBP4442 plasmid pTi_CFBP4442, complete sequence	76754-76785	8	0.75
NZ_CP011058_12	12.8|3239245|32|NZ_CP011058|CRISPRCasFinder	3239245-3239276	32	NZ_KY000062	Agrobacterium genomosp. 3 strain CFBP4424 plasmid pTi_CFBP4424, complete sequence	211098-211129	8	0.75
NZ_CP011058_12	12.8|3239245|32|NZ_CP011058|CRISPRCasFinder	3239245-3239276	32	NZ_KY000073	Agrobacterium tumefaciens strain Tun188 plasmid pTi_Tun188, complete sequence	150131-150162	8	0.75
NZ_CP011058_12	12.8|3239245|32|NZ_CP011058|CRISPRCasFinder	3239245-3239276	32	NZ_KY000052	Agrobacterium tumefaciens strain CFBP7000 plasmid pTi_CFBP7000, complete sequence	2225-2256	8	0.75
NZ_CP011058_12	12.8|3239245|32|NZ_CP011058|CRISPRCasFinder	3239245-3239276	32	NZ_KY000057	Agrobacterium fabrum strain CFBP5505 plasmid pTi_CFBP5505, complete sequence	179395-179426	8	0.75
NZ_CP011058_12	12.8|3239245|32|NZ_CP011058|CRISPRCasFinder	3239245-3239276	32	NZ_KY000049	Agrobacterium rhizogenes strain CFBP4423 plasmid pTi_CFBP4423, complete sequence	168031-168062	8	0.75
NZ_CP011058_12	12.8|3239245|32|NZ_CP011058|CRISPRCasFinder	3239245-3239276	32	NZ_KY000055	Agrobacterium rubi strain Tun159 plasmid pTi_Tun159, complete sequence	31111-31142	8	0.75
NZ_CP011058_12	12.8|3239245|32|NZ_CP011058|CRISPRCasFinder	3239245-3239276	32	NZ_KY000071	Agrobacterium tumefaciens strain Tun183 plasmid pTi_Tun183, complete sequence	80215-80246	8	0.75
NZ_CP011058_12	12.8|3239245|32|NZ_CP011058|CRISPRCasFinder	3239245-3239276	32	NZ_KY000043	Agrobacterium rhizogenes strain CFBP1905 plasmid pTi_CFBP1905, complete sequence	176851-176882	8	0.75
NZ_CP011058_12	12.8|3239245|32|NZ_CP011058|CRISPRCasFinder	3239245-3239276	32	NZ_KY000048	Agrobacterium rhizogenes strain CFBP2746 plasmid pTi_CFBP2746, complete sequence	87515-87546	8	0.75
NZ_CP011058_12	12.8|3239245|32|NZ_CP011058|CRISPRCasFinder	3239245-3239276	32	NZ_KY000053	Agrobacterium genomosp. 1 strain DC12-001 plasmid pTi_DC12-001, complete sequence	167709-167740	8	0.75
NZ_CP011058_12	12.8|3239245|32|NZ_CP011058|CRISPRCasFinder	3239245-3239276	32	NZ_KY000054	Agrobacterium tumefaciens strain Tun154 plasmid pTi_Tun154, complete sequence	185092-185123	8	0.75
NZ_CP011058_12	12.8|3239245|32|NZ_CP011058|CRISPRCasFinder	3239245-3239276	32	NZ_KY000047	Agrobacterium genomosp. 1 strain CFBP2516 plasmid pTi_CFBP2516, complete sequence	62822-62853	8	0.75
NZ_CP011058_12	12.8|3239245|32|NZ_CP011058|CRISPRCasFinder	3239245-3239276	32	NZ_KY000046	Agrobacterium genomosp. 1 strain CFBP2177 plasmid pTi_CFBP2177, complete sequence	154104-154135	8	0.75
NZ_CP011058_12	12.8|3239245|32|NZ_CP011058|CRISPRCasFinder	3239245-3239276	32	NZ_KY000051	Agrobacterium genomosp. 1 strain CFBP5503 plasmid pTi_CFBP5503, complete sequence	210893-210924	8	0.75
NZ_CP011058_12	12.8|3239245|32|NZ_CP011058|CRISPRCasFinder	3239245-3239276	32	NZ_KY000063	Agrobacterium fabrum strain CFBP6549 plasmid pTi_CFBP6549, complete sequence	99662-99693	8	0.75
NZ_CP011058_7	7.1|2857524|34|NZ_CP011058|PILER-CR	2857524-2857557	34	NC_018510	Bacillus thuringiensis HD-789 plasmid pBTHD789-3, complete sequence	201430-201463	9	0.735
NZ_CP011058_7	7.1|2857524|34|NZ_CP011058|PILER-CR	2857524-2857557	34	NZ_CP013280	Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-5-100K, complete sequence	65396-65429	9	0.735
NZ_CP011058_7	7.1|2857524|34|NZ_CP011058|PILER-CR	2857524-2857557	34	NZ_CP039726	Bacillus thuringiensis strain BT-59 plasmid p5, complete sequence	74442-74475	9	0.735
NZ_CP011058_7	7.1|2857524|34|NZ_CP011058|PILER-CR	2857524-2857557	34	NZ_CP009350	Bacillus thuringiensis HD1002 plasmid 4, complete sequence	94226-94259	9	0.735
NZ_CP011058_11	11.24|3237111|34|NZ_CP011058|PILER-CR,CRISPRCasFinder,CRT	3237111-3237144	34	NZ_CP040937	Hymenobacter sp. DG01 plasmid unnamed, complete sequence	281816-281849	9	0.735
NZ_CP011058_12	12.8|3239245|32|NZ_CP011058|CRISPRCasFinder	3239245-3239276	32	NZ_CP012748	Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence	2153722-2153753	9	0.719
NZ_CP011058_7	7.1|2857524|34|NZ_CP011058|PILER-CR	2857524-2857557	34	MN018232	Synechococcus phage S-B43, complete genome	51545-51578	10	0.706
NZ_CP011058_7	7.1|2857524|34|NZ_CP011058|PILER-CR	2857524-2857557	34	MH920638	Synechoccus phage S-B05, partial genome	29081-29114	10	0.706
NZ_CP011058_7	7.1|2857524|34|NZ_CP011058|PILER-CR	2857524-2857557	34	MK799832	Synechococcus phage S-B05, complete genome	29081-29114	10	0.706
NZ_CP011058_11	11.19|3236781|35|NZ_CP011058|PILER-CR,CRISPRCasFinder,CRT	3236781-3236815	35	NZ_CP048287	Paenibacillus sp. 14171R-81 plasmid unnamed1, complete sequence	141191-141225	10	0.714
NZ_CP011058_12	12.4|3238984|32|NZ_CP011058|CRISPRCasFinder,CRT	3238984-3239015	32	NC_015059	Granulicella tundricola MP5ACTX9 plasmid pACIX904, complete sequence	46285-46316	10	0.688
NZ_CP011058_11	11.5|3235862|34|NZ_CP011058|PILER-CR,CRISPRCasFinder,CRT	3235862-3235895	34	NC_047959	Enterobacteria phage vB_EcoS_IME18, complete genome	27454-27487	11	0.676

1. spacer 8.1|2942640|28|NZ_CP011058|CRISPRCasFinder matches to NC_014533 (Gloeothece verrucosa PCC 7822 plasmid Cy782201, complete sequence) position: , mismatch: 3, identity: 0.893

aagtttttgtgaagcttgcctgcatgct	CRISPR spacer
aagtttttgtaaagcttgcctgcttgat	Protospacer
**********.************ ** *

2. spacer 9.1|3152106|27|NZ_CP011058|CRISPRCasFinder matches to AP019515 (Halomonas sulfidaeris ATCC BAA-803 plasmid pBAA-803-A DNA, complete genome) position: , mismatch: 6, identity: 0.778

tttccaaatgggctcataaatgcaaaa	CRISPR spacer
catccaaaagggctcataaattcaatc	Protospacer
. ****** ************ ***  

3. spacer 9.1|3152106|27|NZ_CP011058|CRISPRCasFinder matches to NZ_CP011053 (Halomonas sp. KO116 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.778

tttccaaatgggctcataaatgcaaaa	CRISPR spacer
catccaaaagggctcataaattcaatc	Protospacer
. ****** ************ ***  

4. spacer 11.14|3236454|35|NZ_CP011058|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP037443 (Klebsiella sp. PO552 plasmid p2, complete sequence) position: , mismatch: 8, identity: 0.771

gtgttcacctgctccgcgatgctgcggatgatatt	CRISPR spacer
ttgatttcctgctccgcgatgatgcggttgatgat	Protospacer
 ** *. ************** ***** ****. *

5. spacer 11.17|3236652|33|NZ_CP011058|PILER-CR,CRISPRCasFinder,CRT matches to MK448839 (Streptococcus phage Javan102, complete genome) position: , mismatch: 8, identity: 0.758

atctgaaccgcctcctttaatacaattgtatca	CRISPR spacer
atctgaacagcctcttttaatacaagctttccg	Protospacer
******** *****.********** . * .*.

6. spacer 11.17|3236652|33|NZ_CP011058|PILER-CR,CRISPRCasFinder,CRT matches to MK448667 (Streptococcus phage Javan105, complete genome) position: , mismatch: 8, identity: 0.758

atctgaaccgcctcctttaatacaattgtatca	CRISPR spacer
atctgaacagcctcttttaatacaagctttccg	Protospacer
******** *****.********** . * .*.

7. spacer 11.17|3236652|33|NZ_CP011058|PILER-CR,CRISPRCasFinder,CRT matches to MK448843 (Streptococcus phage Javan112, complete genome) position: , mismatch: 8, identity: 0.758

atctgaaccgcctcctttaatacaattgtatca	CRISPR spacer
atctgaacagcctcttttaatacaagctttccg	Protospacer
******** *****.********** . * .*.

8. spacer 11.17|3236652|33|NZ_CP011058|PILER-CR,CRISPRCasFinder,CRT matches to MK448841 (Streptococcus phage Javan108, complete genome) position: , mismatch: 8, identity: 0.758

atctgaaccgcctcctttaatacaattgtatca	CRISPR spacer
atctgaacagcctcttttaatacaagctttccg	Protospacer
******** *****.********** . * .*.

9. spacer 12.8|3239245|32|NZ_CP011058|CRISPRCasFinder matches to NZ_KX388535 (Agrobacterium tumefaciens strain EU6 plasmid pTiEU6, complete sequence) position: , mismatch: 8, identity: 0.75

cgccaa-gagaaaacgtatgcgcggatcaaaac	CRISPR spacer
-gtaagcgagataacgcatgcgcggatcaagtc	Protospacer
 *. *. **** ****.*************. *

10. spacer 12.8|3239245|32|NZ_CP011058|CRISPRCasFinder matches to NZ_KY000059 (Agrobacterium tumefaciens strain CFBP1898 plasmid pTi_CFBP1898, complete sequence) position: , mismatch: 8, identity: 0.75

cgccaa-gagaaaacgtatgcgcggatcaaaac	CRISPR spacer
-gtaagcgagataacgcatgcgcggatcaagtc	Protospacer
 *. *. **** ****.*************. *

11. spacer 12.8|3239245|32|NZ_CP011058|CRISPRCasFinder matches to KY000034 (Agrobacterium sp. strain C58PMP90 plasmid pTi_C58PMP90, complete sequence) position: , mismatch: 8, identity: 0.75

cgccaa-gagaaaacgtatgcgcggatcaaaac	CRISPR spacer
-gtaagcgagataacgcatgcgcggatcaagtc	Protospacer
 *. *. **** ****.*************. *

12. spacer 12.8|3239245|32|NZ_CP011058|CRISPRCasFinder matches to KY000036 (Agrobacterium sp. strain GV3101 plasmid pTi_GV3101, complete sequence) position: , mismatch: 8, identity: 0.75

cgccaa-gagaaaacgtatgcgcggatcaaaac	CRISPR spacer
-gtaagcgagataacgcatgcgcggatcaagtc	Protospacer
 *. *. **** ****.*************. *

13. spacer 12.8|3239245|32|NZ_CP011058|CRISPRCasFinder matches to NZ_CP042277 (Agrobacterium tumefaciens strain 186 plasmid pTi, complete sequence) position: , mismatch: 8, identity: 0.75

cgccaa-gagaaaacgtatgcgcggatcaaaac	CRISPR spacer
-gtaagcgagataacgcatgcgcggatcaagtc	Protospacer
 *. *. **** ****.*************. *

14. spacer 12.8|3239245|32|NZ_CP011058|CRISPRCasFinder matches to NZ_CP032929 (Agrobacterium tumefaciens strain 1D1460 plasmid pTi1D1460, complete sequence) position: , mismatch: 8, identity: 0.75

cgccaa-gagaaaacgtatgcgcggatcaaaac	CRISPR spacer
-gtaagcgagataacgcatgcgcggatcaagtc	Protospacer
 *. *. **** ****.*************. *

15. spacer 12.8|3239245|32|NZ_CP011058|CRISPRCasFinder matches to NZ_CP039927 (Agrobacterium tumefaciens strain CFBP7129 plasmid pTiCFBP7129, complete sequence) position: , mismatch: 8, identity: 0.75

cgccaa-gagaaaacgtatgcgcggatcaaaac	CRISPR spacer
-gtaagcgagataacgcatgcgcggatcaagtc	Protospacer
 *. *. **** ****.*************. *

16. spacer 12.8|3239245|32|NZ_CP011058|CRISPRCasFinder matches to NC_002147 (Agrobacterium tumefaciens MAFF301001 plasmid pTi-SAKURA, complete sequence) position: , mismatch: 8, identity: 0.75

cgccaa-gagaaaacgtatgcgcggatcaaaac	CRISPR spacer
-gtaagcgagataacgcatgcgcggatcaagtc	Protospacer
 *. *. **** ****.*************. *

17. spacer 12.8|3239245|32|NZ_CP011058|CRISPRCasFinder matches to NZ_CP032925 (Agrobacterium tumefaciens strain 1D1108 plasmid pTi1D1108, complete sequence) position: , mismatch: 8, identity: 0.75

cgccaa-gagaaaacgtatgcgcggatcaaaac	CRISPR spacer
-gtaagcgagataacgcatgcgcggatcaagtc	Protospacer
 *. *. **** ****.*************. *

18. spacer 12.8|3239245|32|NZ_CP011058|CRISPRCasFinder matches to NZ_CP030831 (Neorhizobium sp. NCHU2750 plasmid pTiNCHU2750, complete sequence) position: , mismatch: 8, identity: 0.75

cgccaa-gagaaaacgtatgcgcggatcaaaac	CRISPR spacer
-gtaagcgagataacgcatgcgcggatcaagtc	Protospacer
 *. *. **** ****.*************. *

19. spacer 12.8|3239245|32|NZ_CP011058|CRISPRCasFinder matches to NZ_CP033026 (Agrobacterium fabrum strain 1D132 plasmid pTi1D132, complete sequence) position: , mismatch: 8, identity: 0.75

cgccaa-gagaaaacgtatgcgcggatcaaaac	CRISPR spacer
-gtaagcgagataacgcatgcgcggatcaagtc	Protospacer
 *. *. **** ****.*************. *

20. spacer 12.8|3239245|32|NZ_CP011058|CRISPRCasFinder matches to NC_003065 (Agrobacterium fabrum str. C58 plasmid Ti, complete sequence) position: , mismatch: 8, identity: 0.75

cgccaa-gagaaaacgtatgcgcggatcaaaac	CRISPR spacer
-gtaagcgagataacgcatgcgcggatcaagtc	Protospacer
 *. *. **** ****.*************. *

21. spacer 12.8|3239245|32|NZ_CP011058|CRISPRCasFinder matches to NZ_MK439382 (Agrobacterium tumefaciens strain CFBP2178 plasmid pTiCFBP2178, complete sequence) position: , mismatch: 8, identity: 0.75

cgccaa-gagaaaacgtatgcgcggatcaaaac	CRISPR spacer
-gtaagcgagataacgcatgcgcggatcaagtc	Protospacer
 *. *. **** ****.*************. *

22. spacer 12.8|3239245|32|NZ_CP011058|CRISPRCasFinder matches to NZ_MK439383 (Agrobacterium tumefaciens strain CFBP1935 plasmid pTiCFBP1935, complete sequence) position: , mismatch: 8, identity: 0.75

cgccaa-gagaaaacgtatgcgcggatcaaaac	CRISPR spacer
-gtaagcgagataacgcatgcgcggatcaagtc	Protospacer
 *. *. **** ****.*************. *

23. spacer 12.8|3239245|32|NZ_CP011058|CRISPRCasFinder matches to NZ_MK439386 (Agrobacterium tumefaciens strain T37 plasmid pTiT37, complete sequence) position: , mismatch: 8, identity: 0.75

cgccaa-gagaaaacgtatgcgcggatcaaaac	CRISPR spacer
-gtaagcgagataacgcatgcgcggatcaagtc	Protospacer
 *. *. **** ****.*************. *

24. spacer 12.8|3239245|32|NZ_CP011058|CRISPRCasFinder matches to NZ_MK318986 (Agrobacterium rhizogenes strain C6.5 plasmid pTiC6.5, complete sequence) position: , mismatch: 8, identity: 0.75

cgccaa-gagaaaacgtatgcgcggatcaaaac	CRISPR spacer
-gtaagcgagataacgcatgcgcggatcaagtc	Protospacer
 *. *. **** ****.*************. *

25. spacer 12.8|3239245|32|NZ_CP011058|CRISPRCasFinder matches to NZ_MK439385 (Agrobacterium tumefaciens strain Kerr27 plasmid pTiKerr27, complete sequence) position: , mismatch: 8, identity: 0.75

cgccaa-gagaaaacgtatgcgcggatcaaaac	CRISPR spacer
-gtaagcgagataacgcatgcgcggatcaagtc	Protospacer
 *. *. **** ****.*************. *

26. spacer 12.8|3239245|32|NZ_CP011058|CRISPRCasFinder matches to NZ_MK439384 (Agrobacterium tumefaciens strain Kerr108 plasmid pTiKerr108, complete sequence) position: , mismatch: 8, identity: 0.75

cgccaa-gagaaaacgtatgcgcggatcaaaac	CRISPR spacer
-gtaagcgagataacgcatgcgcggatcaagtc	Protospacer
 *. *. **** ****.*************. *

27. spacer 12.8|3239245|32|NZ_CP011058|CRISPRCasFinder matches to NZ_MK439381 (Agrobacterium tumefaciens strain Sule1 plasmid pTiSule1, complete sequence) position: , mismatch: 8, identity: 0.75

cgccaa-gagaaaacgtatgcgcggatcaaaac	CRISPR spacer
-gtaagcgagataacgcatgcgcggatcaagtc	Protospacer
 *. *. **** ****.*************. *

28. spacer 12.8|3239245|32|NZ_CP011058|CRISPRCasFinder matches to NZ_MF511177 (Agrobacterium rhizogenes strain C5.7 plasmid pTiC5.7, complete sequence) position: , mismatch: 8, identity: 0.75

cgccaa-gagaaaacgtatgcgcggatcaaaac	CRISPR spacer
-gtaagcgagataacgcatgcgcggatcaagtc	Protospacer
 *. *. **** ****.*************. *

29. spacer 12.8|3239245|32|NZ_CP011058|CRISPRCasFinder matches to NZ_KY000039 (Agrobacterium deltaense strain Tun180 plasmid pTi_Tun180, complete sequence) position: , mismatch: 8, identity: 0.75

cgccaa-gagaaaacgtatgcgcggatcaaaac	CRISPR spacer
-gtaagcgagataacgcatgcgcggatcaagtc	Protospacer
 *. *. **** ****.*************. *

30. spacer 12.8|3239245|32|NZ_CP011058|CRISPRCasFinder matches to NZ_KY000064 (Agrobacterium tumefaciens strain CFBP7126 plasmid pTi_CFBP7126, complete sequence) position: , mismatch: 8, identity: 0.75

cgccaa-gagaaaacgtatgcgcggatcaaaac	CRISPR spacer
-gtaagcgagataacgcatgcgcggatcaagtc	Protospacer
 *. *. **** ****.*************. *

31. spacer 12.8|3239245|32|NZ_CP011058|CRISPRCasFinder matches to NZ_KY000069 (Agrobacterium deltaense strain Tun176 plasmid pTi_Tun176, complete sequence) position: , mismatch: 8, identity: 0.75

cgccaa-gagaaaacgtatgcgcggatcaaaac	CRISPR spacer
-gtaagcgagataacgcatgcgcggatcaagtc	Protospacer
 *. *. **** ****.*************. *

32. spacer 12.8|3239245|32|NZ_CP011058|CRISPRCasFinder matches to NZ_KY000058 (Agrobacterium rhizogenes strain CFBP1317 plasmid pTi_CFBP1317, complete sequence) position: , mismatch: 8, identity: 0.75

cgccaa-gagaaaacgtatgcgcggatcaaaac	CRISPR spacer
-gtaagcgagataacgcatgcgcggatcaagtc	Protospacer
 *. *. **** ****.*************. *

33. spacer 12.8|3239245|32|NZ_CP011058|CRISPRCasFinder matches to NZ_KY000068 (Agrobacterium deltaense strain Tun151 plasmid pTi_Tun151, complete sequence) position: , mismatch: 8, identity: 0.75

cgccaa-gagaaaacgtatgcgcggatcaaaac	CRISPR spacer
-gtaagcgagataacgcatgcgcggatcaagtc	Protospacer
 *. *. **** ****.*************. *

34. spacer 12.8|3239245|32|NZ_CP011058|CRISPRCasFinder matches to NZ_KY000070 (Agrobacterium tumefaciens strain Tun178 plasmid pTi_Tun178, complete sequence) position: , mismatch: 8, identity: 0.75

cgccaa-gagaaaacgtatgcgcggatcaaaac	CRISPR spacer
-gtaagcgagataacgcatgcgcggatcaagtc	Protospacer
 *. *. **** ****.*************. *

35. spacer 12.8|3239245|32|NZ_CP011058|CRISPRCasFinder matches to NZ_KY000027 (Agrobacterium rhizogenes strain CFBP2692 plasmid pTi_CFBP2692, complete sequence) position: , mismatch: 8, identity: 0.75

cgccaa-gagaaaacgtatgcgcggatcaaaac	CRISPR spacer
-gtaagcgagataacgcatgcgcggatcaagtc	Protospacer
 *. *. **** ****.*************. *

36. spacer 12.8|3239245|32|NZ_CP011058|CRISPRCasFinder matches to NZ_KY000031 (Agrobacterium genomosp. 1 strain Tun198 plasmid pTi_Tun198, complete sequence) position: , mismatch: 8, identity: 0.75

cgccaa-gagaaaacgtatgcgcggatcaaaac	CRISPR spacer
-gtaagcgagataacgcatgcgcggatcaagtc	Protospacer
 *. *. **** ****.*************. *

37. spacer 12.8|3239245|32|NZ_CP011058|CRISPRCasFinder matches to NZ_KY000041 (Agrobacterium tumefaciens strain CFBP296 plasmid pTi_CFBP296, complete sequence) position: , mismatch: 8, identity: 0.75

cgccaa-gagaaaacgtatgcgcggatcaaaac	CRISPR spacer
-gtaagcgagataacgcatgcgcggatcaagtc	Protospacer
 *. *. **** ****.*************. *

38. spacer 12.8|3239245|32|NZ_CP011058|CRISPRCasFinder matches to NZ_KY000065 (Agrobacterium tumefaciens strain CFBP7128 plasmid pTi_CFBP7128, complete sequence) position: , mismatch: 8, identity: 0.75

cgccaa-gagaaaacgtatgcgcggatcaaaac	CRISPR spacer
-gtaagcgagataacgcatgcgcggatcaagtc	Protospacer
 *. *. **** ****.*************. *

39. spacer 12.8|3239245|32|NZ_CP011058|CRISPRCasFinder matches to NZ_KY000028 (Agrobacterium genomosp. 1 strain CFBP2712 plasmid pTi_CFBP2712, complete sequence) position: , mismatch: 8, identity: 0.75

cgccaa-gagaaaacgtatgcgcggatcaaaac	CRISPR spacer
-gtaagcgagataacgcatgcgcggatcaagtc	Protospacer
 *. *. **** ****.*************. *

40. spacer 12.8|3239245|32|NZ_CP011058|CRISPRCasFinder matches to NZ_KY000066 (Agrobacterium deltaense strain CFBP7129 plasmid pTi_CFBP7129, complete sequence) position: , mismatch: 8, identity: 0.75

cgccaa-gagaaaacgtatgcgcggatcaaaac	CRISPR spacer
-gtaagcgagataacgcatgcgcggatcaagtc	Protospacer
 *. *. **** ****.*************. *

41. spacer 12.8|3239245|32|NZ_CP011058|CRISPRCasFinder matches to NZ_KY000044 (Agrobacterium fabrum strain CFBP1933 plasmid pTi_CFBP1933, complete sequence) position: , mismatch: 8, identity: 0.75

cgccaa-gagaaaacgtatgcgcggatcaaaac	CRISPR spacer
-gtaagcgagataacgcatgcgcggatcaagtc	Protospacer
 *. *. **** ****.*************. *

42. spacer 12.8|3239245|32|NZ_CP011058|CRISPRCasFinder matches to NZ_KY000050 (Agrobacterium tumefaciens strain CFBP4442 plasmid pTi_CFBP4442, complete sequence) position: , mismatch: 8, identity: 0.75

cgccaa-gagaaaacgtatgcgcggatcaaaac	CRISPR spacer
-gtaagcgagataacgcatgcgcggatcaagtc	Protospacer
 *. *. **** ****.*************. *

43. spacer 12.8|3239245|32|NZ_CP011058|CRISPRCasFinder matches to NZ_KY000062 (Agrobacterium genomosp. 3 strain CFBP4424 plasmid pTi_CFBP4424, complete sequence) position: , mismatch: 8, identity: 0.75

cgccaa-gagaaaacgtatgcgcggatcaaaac	CRISPR spacer
-gtaagcgagataacgcatgcgcggatcaagtc	Protospacer
 *. *. **** ****.*************. *

44. spacer 12.8|3239245|32|NZ_CP011058|CRISPRCasFinder matches to NZ_KY000073 (Agrobacterium tumefaciens strain Tun188 plasmid pTi_Tun188, complete sequence) position: , mismatch: 8, identity: 0.75

cgccaa-gagaaaacgtatgcgcggatcaaaac	CRISPR spacer
-gtaagcgagataacgcatgcgcggatcaagtc	Protospacer
 *. *. **** ****.*************. *

45. spacer 12.8|3239245|32|NZ_CP011058|CRISPRCasFinder matches to NZ_KY000052 (Agrobacterium tumefaciens strain CFBP7000 plasmid pTi_CFBP7000, complete sequence) position: , mismatch: 8, identity: 0.75

cgccaa-gagaaaacgtatgcgcggatcaaaac	CRISPR spacer
-gtaagcgagataacgcatgcgcggatcaagtc	Protospacer
 *. *. **** ****.*************. *

46. spacer 12.8|3239245|32|NZ_CP011058|CRISPRCasFinder matches to NZ_KY000057 (Agrobacterium fabrum strain CFBP5505 plasmid pTi_CFBP5505, complete sequence) position: , mismatch: 8, identity: 0.75

cgccaa-gagaaaacgtatgcgcggatcaaaac	CRISPR spacer
-gtaagcgagataacgcatgcgcggatcaagtc	Protospacer
 *. *. **** ****.*************. *

47. spacer 12.8|3239245|32|NZ_CP011058|CRISPRCasFinder matches to NZ_KY000049 (Agrobacterium rhizogenes strain CFBP4423 plasmid pTi_CFBP4423, complete sequence) position: , mismatch: 8, identity: 0.75

cgccaa-gagaaaacgtatgcgcggatcaaaac	CRISPR spacer
-gtaagcgagataacgcatgcgcggatcaagtc	Protospacer
 *. *. **** ****.*************. *

48. spacer 12.8|3239245|32|NZ_CP011058|CRISPRCasFinder matches to NZ_KY000055 (Agrobacterium rubi strain Tun159 plasmid pTi_Tun159, complete sequence) position: , mismatch: 8, identity: 0.75

cgccaa-gagaaaacgtatgcgcggatcaaaac	CRISPR spacer
-gtaagcgagataacgcatgcgcggatcaagtc	Protospacer
 *. *. **** ****.*************. *

49. spacer 12.8|3239245|32|NZ_CP011058|CRISPRCasFinder matches to NZ_KY000071 (Agrobacterium tumefaciens strain Tun183 plasmid pTi_Tun183, complete sequence) position: , mismatch: 8, identity: 0.75

cgccaa-gagaaaacgtatgcgcggatcaaaac	CRISPR spacer
-gtaagcgagataacgcatgcgcggatcaagtc	Protospacer
 *. *. **** ****.*************. *

50. spacer 12.8|3239245|32|NZ_CP011058|CRISPRCasFinder matches to NZ_KY000043 (Agrobacterium rhizogenes strain CFBP1905 plasmid pTi_CFBP1905, complete sequence) position: , mismatch: 8, identity: 0.75

cgccaa-gagaaaacgtatgcgcggatcaaaac	CRISPR spacer
-gtaagcgagataacgcatgcgcggatcaagtc	Protospacer
 *. *. **** ****.*************. *

51. spacer 12.8|3239245|32|NZ_CP011058|CRISPRCasFinder matches to NZ_KY000048 (Agrobacterium rhizogenes strain CFBP2746 plasmid pTi_CFBP2746, complete sequence) position: , mismatch: 8, identity: 0.75

cgccaa-gagaaaacgtatgcgcggatcaaaac	CRISPR spacer
-gtaagcgagataacgcatgcgcggatcaagtc	Protospacer
 *. *. **** ****.*************. *

52. spacer 12.8|3239245|32|NZ_CP011058|CRISPRCasFinder matches to NZ_KY000053 (Agrobacterium genomosp. 1 strain DC12-001 plasmid pTi_DC12-001, complete sequence) position: , mismatch: 8, identity: 0.75

cgccaa-gagaaaacgtatgcgcggatcaaaac	CRISPR spacer
-gtaagcgagataacgcatgcgcggatcaagtc	Protospacer
 *. *. **** ****.*************. *

53. spacer 12.8|3239245|32|NZ_CP011058|CRISPRCasFinder matches to NZ_KY000054 (Agrobacterium tumefaciens strain Tun154 plasmid pTi_Tun154, complete sequence) position: , mismatch: 8, identity: 0.75

cgccaa-gagaaaacgtatgcgcggatcaaaac	CRISPR spacer
-gtaagcgagataacgcatgcgcggatcaagtc	Protospacer
 *. *. **** ****.*************. *

54. spacer 12.8|3239245|32|NZ_CP011058|CRISPRCasFinder matches to NZ_KY000047 (Agrobacterium genomosp. 1 strain CFBP2516 plasmid pTi_CFBP2516, complete sequence) position: , mismatch: 8, identity: 0.75

cgccaa-gagaaaacgtatgcgcggatcaaaac	CRISPR spacer
-gtaagcgagataacgcatgcgcggatcaagtc	Protospacer
 *. *. **** ****.*************. *

55. spacer 12.8|3239245|32|NZ_CP011058|CRISPRCasFinder matches to NZ_KY000046 (Agrobacterium genomosp. 1 strain CFBP2177 plasmid pTi_CFBP2177, complete sequence) position: , mismatch: 8, identity: 0.75

cgccaa-gagaaaacgtatgcgcggatcaaaac	CRISPR spacer
-gtaagcgagataacgcatgcgcggatcaagtc	Protospacer
 *. *. **** ****.*************. *

56. spacer 12.8|3239245|32|NZ_CP011058|CRISPRCasFinder matches to NZ_KY000051 (Agrobacterium genomosp. 1 strain CFBP5503 plasmid pTi_CFBP5503, complete sequence) position: , mismatch: 8, identity: 0.75

cgccaa-gagaaaacgtatgcgcggatcaaaac	CRISPR spacer
-gtaagcgagataacgcatgcgcggatcaagtc	Protospacer
 *. *. **** ****.*************. *

57. spacer 12.8|3239245|32|NZ_CP011058|CRISPRCasFinder matches to NZ_KY000063 (Agrobacterium fabrum strain CFBP6549 plasmid pTi_CFBP6549, complete sequence) position: , mismatch: 8, identity: 0.75

cgccaa-gagaaaacgtatgcgcggatcaaaac	CRISPR spacer
-gtaagcgagataacgcatgcgcggatcaagtc	Protospacer
 *. *. **** ****.*************. *

58. spacer 7.1|2857524|34|NZ_CP011058|PILER-CR matches to NC_018510 (Bacillus thuringiensis HD-789 plasmid pBTHD789-3, complete sequence) position: , mismatch: 9, identity: 0.735

--cgcaatcgtttaaaattattttgaagcatattct	CRISPR spacer
ttactaat--tttaaaattatctttaagcatatttc	Protospacer
    .***  ***********.** *********..

59. spacer 7.1|2857524|34|NZ_CP011058|PILER-CR matches to NZ_CP013280 (Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-5-100K, complete sequence) position: , mismatch: 9, identity: 0.735

--cgcaatcgtttaaaattattttgaagcatattct	CRISPR spacer
ttactaat--tttaaaattatctttaagcatatttc	Protospacer
    .***  ***********.** *********..

60. spacer 7.1|2857524|34|NZ_CP011058|PILER-CR matches to NZ_CP039726 (Bacillus thuringiensis strain BT-59 plasmid p5, complete sequence) position: , mismatch: 9, identity: 0.735

--cgcaatcgtttaaaattattttgaagcatattct	CRISPR spacer
ttactaat--tttaaaattatctttaagcatatttc	Protospacer
    .***  ***********.** *********..

61. spacer 7.1|2857524|34|NZ_CP011058|PILER-CR matches to NZ_CP009350 (Bacillus thuringiensis HD1002 plasmid 4, complete sequence) position: , mismatch: 9, identity: 0.735

--cgcaatcgtttaaaattattttgaagcatattct	CRISPR spacer
ttactaat--tttaaaattatctttaagcatatttc	Protospacer
    .***  ***********.** *********..

62. spacer 11.24|3237111|34|NZ_CP011058|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040937 (Hymenobacter sp. DG01 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

ttttaggaggaggtgaataacatgggacaaatca	CRISPR spacer
gtcatggcggaggtgaataacatggggcaacact	Protospacer
 *.  ** ******************.***  * 

63. spacer 12.8|3239245|32|NZ_CP011058|CRISPRCasFinder matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cgccaagagaaaacgtatgcgcggatcaaaac	CRISPR spacer
tggccgcccaagacgtatgcgcggatcgaaac	Protospacer
.* * .   **.***************.****

64. spacer 7.1|2857524|34|NZ_CP011058|PILER-CR matches to MN018232 (Synechococcus phage S-B43, complete genome) position: , mismatch: 10, identity: 0.706

cgcaatcgtttaaaattattttgaagcatattct	CRISPR spacer
tgatgaagttttaaattattttgaaccatattag	Protospacer
.*  .  **** ************* ******  

65. spacer 7.1|2857524|34|NZ_CP011058|PILER-CR matches to MH920638 (Synechoccus phage S-B05, partial genome) position: , mismatch: 10, identity: 0.706

cgcaatcgtttaaaattattttgaagcatattct	CRISPR spacer
tgatgaagttttaaattattttgaaccatattag	Protospacer
.*  .  **** ************* ******  

66. spacer 7.1|2857524|34|NZ_CP011058|PILER-CR matches to MK799832 (Synechococcus phage S-B05, complete genome) position: , mismatch: 10, identity: 0.706

cgcaatcgtttaaaattattttgaagcatattct	CRISPR spacer
tgatgaagttttaaattattttgaaccatattag	Protospacer
.*  .  **** ************* ******  

67. spacer 11.19|3236781|35|NZ_CP011058|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP048287 (Paenibacillus sp. 14171R-81 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.714

aggttcagttactggaacgcctggatcagcgagac	CRISPR spacer
atcttcagttactggaacgactggttcaacagtct	Protospacer
*  **************** **** ***.*..  .

68. spacer 12.4|3238984|32|NZ_CP011058|CRISPRCasFinder,CRT matches to NC_015059 (Granulicella tundricola MP5ACTX9 plasmid pACIX904, complete sequence) position: , mismatch: 10, identity: 0.688

ttgccttccgatccatcagcagcacatataag	CRISPR spacer
tgtccttccgctccatcagcagaacacccgtc	Protospacer
*  ******* *********** ***. ..  

69. spacer 11.5|3235862|34|NZ_CP011058|PILER-CR,CRISPRCasFinder,CRT matches to NC_047959 (Enterobacteria phage vB_EcoS_IME18, complete genome) position: , mismatch: 11, identity: 0.676

cttccacagacaacaaagcgaccaaaaaaccgtt	CRISPR spacer
gcgacacagacaacaaagcgcgcaaaaagattct	Protospacer
 .  ****************  ******. . .*

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site
DBSCAN-SWA_1	1508270 : 1519552	9	Prochlorococcus_phage(25.0%)	NA	NA
DBSCAN-SWA_2	5322543 : 5334996	11	Bacillus_phage(25.0%)	NA	NA
DBSCAN-SWA_3	5520994 : 5530603	12	Staphylococcus_phage(50.0%)	NA	NA

Sequences of DBSCAN-SWA_1

Nucleotide sequences of DBSCAN-SWA_1

>NZ_CP011058|1508270:1519552|DBSCAN-SWA
ATTAGTGTTTGAAATGGCGGACGCCCGTAAACACCATCGCGATGTTGTTGGCGTTTGCGACCGCAATCGACTCTTCGTCCCGTACCGAGCCGCCCGGCTGAATGACGGCCGTAATGCCGGCTTTCGCCGCCAGCTCCAGCGTGTCGCCCATCGGGAAAAACGCGTCGGATGCCAGCACGGAGCCCTGCGACTTCTCGCCCGCCTGCTCGATCGCGATGCGGGCCGCGCCGACGCGGTTCATTTGGCCGGCGCCGACGCCGATCGTCATGTCGTCTTTGGCCAGCAAAATCGCGTTCGATTTCACATGCTTGACCACTTTCCAGCCGAACAGCAGCTGCTTCAGCTCCTCATCGGTCGGCTTGCGATTCGTGACCACCTTCAGGTCGTCTGCGGAAATCGTGTGCACGTCGCTCTCCTGCACGAGCATGCCGCCATCCACGGACGTTACGAGCCATTCCGGCTTGCGCTCGGCGGCGGAAGTAAACTCTCCCAGCTTCAGCAAACGGATATTTTTTTTGCGGGTTAGAATCTCAAGCGCTTCCGGCGCAAAGTCCGGCGCGATGATGATCTCAAGGAAAATTTCGCTCAGAAGCGCCGCCGTCGCCGCGTCGATTGTGCGGTTGGCCGCCACGATGCCGCCGAAGATGGACGTCGGATCGGCCGCGTACGCCTTTTGGTAGGCTTCATGAATATTCGTTCCGATGCCGACGCCGCAAGGGTTCATATGCTTCACGGCCACGACGGCCGGCTCGTCGAACTCCTTCAGAACGGCGAGCGCCGCGTTGGCGTCGTTGATGTTGTTGTAGGAAAGCTCCTTGCCGTGCAGCTGCTCGGCAGTCGTAATGTTGCCGCTGGCCGCGAGCGGCTTGCGGTAGAACGCCGCCTTCTGGTGCGGGTTTTCCCCATAGCGCAAATCCTGCACTTTTTCGTACGTTACGGTGTAGCGCTCCGGCAGTGGCTCGCCGACCTGCTTGGAGAGGTAATCGGAGATGAGCGCGTCGTAGGAGCCGGTGTGGCGGAATACTTTGGCTGCAAGCCGTTTGCGCGTTTCCAGCGTCGTGTCGCCCTGCGCCTTGATTTCGTCCAGCACGGCGCCGTAATCGGCCGCATCGACGACAACCGTTACGAACGCGTGGTTTTTCGCTGCGGAACGGAGCATCGTCGGCCCGCCGATGTCGATGTTTTCGATCGCGTCTTCATACGTGACGTCCGGCTTCGCAATCGTCTGCGCGAACGGATACAGGTTGACAACGACAAGGTCGATATAGTCGAGTCCGAGCTCCTTCATCGCCTTCTGGTGCTCTTCATCGTCGCGCACCGCAAGCAGGCCGCTATGTACGGCGGGATGCAGCGTTTTGACGCGTCCGTCGAGAATTTCCGGGAAGCCCGTTACGTCCGAGATGCCGGTAACCGGAACGCCTTCCTTCTCGAGCAGGCTGAACGTGCCCCCCGTCGAAATGATTTGTACGCCTTGCTCCGCCAGCTGGCGGGAAAACTCAACGATGCCCGTTTTATCCGAAACGCTGATTAACGCTCTGCGAATTGTCATGCTTGATCTCCCTTCGAAAATGTTGGCGGGTAGCGGGGCGCTGCGCGGACAGGCTTGATCTTCCGATCGCTCTTGCAGCCGGATTTTTTCCAATTTATTTGAAAAGGGTAAAAATCCGCCTACAAATGCGACCGCTGGCGCTTCTACAGATTCAAACCTGCCCGCTCCGCTCCAATCCCGGCGTAGTTAAACAGTACTTTAAGAGCAAACGATTAAAGTCAATTATGTTTCTTTCATCAGATCCGTAAGGCAAGCGAACCTCTCGCGCAGCCAATCCTGCCTGTCTTCCCAAGAAAAAGTACAGCGCAGCGGCTGACTTGTGACTGGAGAAGCGGCAGCGGCCACTTTTTCTACCTCTCCCGGATCGTGACGCGGCGGCCGCCAAGCGCGACGCGCCCTTCGGCGATCATCTGCACGACCCATGGGAAAAGCGCCTGCTCGGCCGCATGAATGCGCTCGGCCAGGCTCGCCTCGTCGTCGCTGTCTGCGATCTCGACGGCACGCTGCGCGATGATCGGGCCGCTGTCCATGCCGCCGTCCACGAAGTGCACGGTGACACCCGTCAGCTTCACGCCGTATTCAAGCGCCTGACGGATGCCGTTCACGCCGGGAAATGCCGGCAGCAGCGACGGATGGATGTTGATCATCCGCCCGTAAAACGGCTCCACCAGCACCGGCGTCAAAATCCGCATATAGCCGGCCAGCACGATCAGGTCGATGCCGCGGCGGATAAGCTCCGCCAATATTTCTTCTTCATACTGCTCTCGCGAAGCGTACTCCTTCGGCTTGAACAGCCACGTGTCGATGCCGGCGCGGCGGGCCCGCTCCACGACGGGCGCCGCCGCCTTGTCACAAACAAGAAGCTCGATGGAACCATCGAGCTTCCCTGCAAGTGCCGCGTCCGCCAGCGCCTGGAAATTGCTTCCCTGGCCGGAGGCGAAGACGGCAATGCGCAGCTTCGCCATTAGACCTCAGCTCCCGTGAACGTAACGATGCGGCTTCCCTCCGTGACGGTGCCGATCCGGTACGCTTCTTCGCCAAGCTCCTTCGCCGCCGCCAGCGCCGCTTCCGCCTGATCGGCCGGCACGACCGCGATCAGGCCAATGCCCATGTTGAACGTCGTGAACATGTCGCGGTTCGTAACCGCGCCCTTCATCTGCATCAGCTTGAACACGGGCTGAATCGGCCACGAACCGTATTCGATCTCCACGTTCACGCCTTCGGGCAGGACGCGCGGAATATTTTCGATAAAGCCACCGCCGGTAATATGCGCCATTCCTTTAACCTGTACGCGTTTGATAAGCTCCAAAGCCGCTTTGACATAAATCTTCGTCGGCTCCAGCAGCACATCGCCAAGCTTCGCGCCGGAGAGCTCCGGCAGCGTATCCTGCAGGCTGTAGCCCGCGTTGTCAAGCAGCAGCCGGCGCACAAGCGAGAAGCCGTTGCTGTGGATGCCGCTCGAAGCAAAACCGATGACGGCGTCGCCAGGAGCGATCGTGCTGCCGTCGATAATTTTTTTCTTGTCGACGATGCCCACCGTGAAGCCCGCGATGTCGTATTCGTCCGCTTGGTACATGCCCGGCATTTCCGCCGTTTCGCCGCCGATCAGAGCGCAGCCGGACTGCACGCAGCCGTCGGAAATTCCTTTGACGACCGCCTCGATTTTTTCCGGCTCAACCTTGCCGCAGGCGAGGTAATCGAGGAAAAACAGCGGCTCCGCACCTTGCACGACGATGTCGTTCACGCACATGGCCACCGCATCGATGCCAATGGTGTCGTGCTTGTCCATGGCGAACGCAATTTTCAGCTTCGTACCGACGCCGTCGGTGCCGGAGACGAGCACCGGCTCCTCGTACTTGTCCTTGTTCAGCCCGAACAGCGCGCCGAAGCCGCCCAAGTCCGTCAGCACTTCCGGACGGAACGTTCTTTTCACATGCTTCTTCATTCGTTCGACGGCTTCATTGCCCGCAGCAATATCGACACCGGCTTGCTTGTACGCTTCTGCCACTCTTGTTCAACACTCCTTCGTTGCCACGCAACGTTAATTTCGTTATTGCACGCCGCTTCCCTAGCAGCTGCAGCTCTTGGTCGAGTCCTCGTCGACCGGAGTCGGATAATCGTTCGTAAAGCACGCCATGCACAGACCGGCGTTCGCCTTCTCACCCGAAGGGTCCACCGATTTCATGAGCCCTTCCTCGCTGAGAAAATAAAGCGAGTCGGCGTTGATCGCCTTCCGGATTTCCTCCGTCGTCTTCTCCGAAGCGATCAGCTCTTTGCGGTCCGGTGTATCGATGCCGTAGTAGCACGGGTTGGCAAACGGCGGCGAGGAAATGCGCACGTGCACCTCCGTCGCGCCCGCTTCCCGCAGCATATTGACGATGCGCAGCGACGTCGTCCCGCGCACGATCGAGTCGTCGATCATGACGACGCGCTTGCCTTCCACCACTTTGCGGACCGCAGACAGCTTCATTTTGACGCCTTTTTCGCGCAGCTCCTGCGAAGGCTGAATGAAGGTGCGGCCCGTATATTTGTTCTTGATCAGTCCGAGCTCGTACGGGATGCCGGTCTGCTCGGCATAACCGATCGCGGCGGAAATGCTGGAATCCGGCACTCCGGTTACAATGTCCGCGTCGACGAACGACTCCAGCGCGAGCTGGCGTCCCATACGCTTGCGGGCCGAATGGATGTTCACTTCGTTGATGTCGCTGTCCGGACGGGCAAAATAAATATATTCCATGACGCACGAAGCGCGCTTTTCCATCGGCTCGAACCGGTCCTCGCGGATGCCCTTGTCATCGAGAATGAGCAGCTCGCCGGGCTTCACGTCGCGTACGTATTCCGCGCCGATCGATTCGAACGAGCACGTCTCCGAGGAGAAGACGTAGCCTTCCCCCAGCCGGCCCATCACAAGCGGACGCAGGCCGTTCGGATCGGAGGCGACCAGCAGCTTGTCGTTGGTCATAATCAGGAATGCGAAGCCCCCGATGATGCGCTGCAGCGCGTCCTTGGCCGCTTCCACGAAGTCCTTCGGGGAGCGGGCGATGAGGTGCGCGATGACCTCGGTATCGCTTGTCGTTTGAAAAATCGACCCCTGCGCTTCCAGCTCGCGGCGAATCGCCGGCGCGTTCACGATGTTGCCGTTCGTCGCGACCGCCAGATCCCCGCCCCGGTACTTGAAGATGAGCGGCTGCGCGTTCGCAAGCCCGCTTCCGCCGGAAGTGGAATAGCGTACGTGACCGATCGCCCGGCTGCCGACCAGATTGTCCAGCTGATCCTTCGTGAACACTTCCTTGACCAGCCCCATGCCGCGATGGTAATGGAACTCACCGTTATCTTCGACCGTGCAGATGCCGGCGCTCTCCTCGCCCCGGTGCTGCAGCGCGTGCAGGCCGTAGTAGGAAAGCGAAGCCGCATCGGGGTGGCCGAACACCCCGAACACGCCGCACTCTTCCCTAAGCTTGTCGAAAATGTCGTCCCGGCCGATTCCTTCGTTGTAGTGGCCGTCGCCCCACGTTCCGCGCAGAAATTCCAGCTCTTCCGCTTCGGTACGGGAAACTTTACGCTCTTCTATTGTTGAACCGGTTATTGCATCAGACATGGAATCGCATCCTTCCAGACTTTCTGGAATTGTTCGACCGGTGCGTTAACGCCCGGTTTGCCGTTGATGTTCATGATCAAATTGTGTCCGCCTACCGTTCCGATCTCCGCATATGCAATTCCCTGCTCGCCCAGACGCGCTTTCAGCGCCGCCGCCTTCTCCGGCTTCGCCGACAGCAGAATCCGCGATTGCGATTCGCTGAACAGCGCATGATCCGCGCGCAGCGTCGTCTCGACGTTTACGCTCGCGCCGAGGCGGCCGCTGAAACACGATTCCGCAACCGCCACTGCAAGACCGCCCTCGGACAGGTCATGCGCCGAGGCGACAAGCCCTTCGCGGATCGCGGAGAGCACGGCGTCCAGCGTCTTTTTCTCCAGTGCCAAATCCAGCTGCGGAGGACGTCCCGTCGGTGCGCCATGCAGCACGTACTGCAGCTCGCTGCCGCCGAACTCCGCTTTCGTTTCGCCAACCAGAATAATAACGTCGCCCTCTGCCTTAAAATCTTGTGTCGTAATGTGGTCAAGATCTTCGACTAGTCCGACCATGCCGATAACCGGCGTCGGATAGATCGCGCCTTTGGCATTCTCGTTGTAAAGGCTGACGTTGCCGCCGATAACCGGCGTGTCCAGCGTGCGGCACGCTTCGCTCATGCCGTCGGCCGCTTTGACGATCTGCCAGAACACTTCCGGCTTCTCCGGGCTGCCGAAGTTGAGGTTGTCCGTAATGGCAAGCGGTGTCGCGCCGGAACAGACGATGTTGCGCGCCGCTTCGGCGACCGCGATCGCTCCGCCCACTTCCGGATCGAGGTAAACGTAGCGCCCGTTGCAGTCGGTCGTCATCGCCAGCGCCTTGCGCGTGCCGGCCACCGTCACGACCGCCGCATCCGAGCCCGGCCGGACCGCGGTGCTGGTGCGTACCATATAGTCATACTGATTATATACCCATTCCTTGCTGGCGACAGTCGGAGAACCGAGCACTTTTTCCAGCGCGCCGTTCAAATCGGTGATTTCTTCAAACGCGGACGCATCCACCGCTGCGTTCTCGCTGTAGTAAGCCGGCTCCTTGGAAGGCGGGTCGTACACCGGACACTCGTCGACGAGCGCCGTAACCGGCATATCGCCCACTTCTTCGCCTTTGTGGAACAGGCGCAGACGGCCGTCGTCGGTCACTTTGCCGACTTTCTTGCAAATGACGCCCCAGCGGTCGAAAATTTCTTTCGCCTGCGCTTCGTGCTGCGGCTCGACGACGAACAGCATCCGCTCCTGCGATTCCGACAGCATCATTTCGTAAGGGGTCATGCCTTCCTCGCGCTGCGGCACTTCATCCAGATACAGCTCCAGGCCGTTGCCGGCTTTGGACGCCATCTCCGCGCTGGAACAGGTCAGGCCCGCCGCGCCCATATCCTGGATGCCGAGCACGATGCCGGAGTCGATCAGCTCGAGCGTCGCTTCCATAACCAGCTTCTCCATGAACGGGTCGCCGACCTGCACCGCCGTCTTCTTCTCCTCCGATTCCTCGGAAAGCTCCACCGATGCGAACGTCGCGCCGTGAATACCGTCGCGGCCCGTTGCCGGACCAACGTAGAAGACGGGGTTGCCGACGCCTTTGGCGACGCCGCGCTGGATTTTGTCATGATCGATCAGGCCGACGCACATCGCGTTGACGAGCGGGTTGCCTTCGTAGCTCGGATCGAACATCACTTCGCCCGCGACCGTCGGAATGCCGATACAGTTGCCGTAACCCGCAATGCCGCCGACGACATGCTCGAACAAATATTTGACGCGATCGTTCTCAAGACGACCGAAGCGCAGGCTGTTCAGTAGCGCAACCGGACGGGCCCCCATCGAGAAAATGTCGCGGATAATGCCGCCGACACCCGTCGCCGCGCCTTGGTAAGGCTCGACCGCGGACGGATGGTTATGCGATTCGATTTTGAATGCGACTGCCTGATTGTCGCCGATATCGACGATGCCCGCGCCTTCGCCGGGTCCCATCAGCACTTTGTCGCCCGTAACCGGGAACTTTTTCAAAATCGACTTGGAGTTTTTGTACGCGCAGTGTTCCGACCACATGACGCTGAAGACGCCGATTTCCGTATAGTTCGGCTTGCGGCCGAGAAATCCGCAAATGAGCTCGTACTCGTGGTCGCTAACCCCGAACTGGTGGTAAATTTTCTGTTCCGCGATTTGCTCCGTCGTCGGCTCCTTAGCCGTTAACTGCTGCGCCATTTTTTTCCCTCCATGCGTTCAAAATCGATGTAAACATCCGTTTGCCGTCCTCCGAGCCGAGCAGCTGGTCCATCGCCCGCTCCGGATGCGGCATCATGCCGAGGACGTTGCCGCGCTCGTTACAGATGCCCGCGATGTCGCGGAGCGATCCGTTCGGGTTGCCGCCGTTTGCGTAGCGGAACACGATCTGACCGTTCGCTTCCAGCTTCGCCAGCGTTTCCTCGTCGCAATAATAGTTGCCTTCGCCGTGCGCGATCGGGATGTTGATGACCTCGCCCTCGCTGTATTGATTCGTAAACGGCGTCTTGTTGCTCATCACTTCAAGCTCCGACTGGTGGCAAAGGAACTTCAGGTTCCGGTTCCGCATCAGCTTGCCCGGCAGCAGGCCCGACTCCGTCAACACCTGGAAGCCGTTGCAAATGCCGAGCACAAGCTTGCCCGCTTCCGCAGCTTTGACAACTTCGCCCATGACCGGAGCGAATTGCGCAATCGCGCCACAGCGCAAGTAGTCCCCATAGGAGAAGCCGCCCGGCAGCAGAATGGCGTCGTAGTCGGACAGGTCGGTCGCCGTATGCCAGACGTAATCAACAGGCTGTCCGATCGCTTCAACCGCCTTGTAGCAGTCAATGTCGCAGTTGGACCCCGGAAAAACGATTACCGCAAATTTCATCGCGCTTATCCCTCCAGTTCGAAACGGAAGTCTTCAACAACCGTGTTGGCAAGCAGCTTCTCGCACATCGCTTTCAGGCGTTCCTCCGCTTCGGCGCGGTCGTTCGTATCCAGGTTCAGCTCCATATATTTGCCGATGCGAACGTTATTCACTTCCGCGAATCCGAGCGAATGAAGCGCTCCTTGAACCGCTGATCCTTGCGGGTCCAATACGTTTTCCTTAATCGTCACGTAAACCGTTGCTTTCATTTCGAACTCCTCCTAAAGGGTGGTGGGCTTAATGCATGTTGTTGTGAAAAAGGTCGCCGCGGCGCGTTAATTCGGTGAAAAAGGGCCCGCTGCGCGGATGGTTTGGGCTTCCGATCGCTGTTGTAGCCGGATTGTTTGGATTGTATAACCCCTGACAGGGTAACAATCCGGCTACAAAGGCGAACGCTATCGCTTCTCCAGCTCCAAACCATCCGTTCCGCTCGGTTTTCACCGTGCATTATAATGCGCGGGCTTCGCTCCCCGCTTTTTCAAGACAAGATGCATTAAGCCGGGTAGTGGGCAAAATGGCTTGCCTTATCTATAGCCTCGCCGAGTGCTTGATTCAATGAAATCTGCCTGTGCTGCGGCGTTTATTTTAAGGATGCTGTCGGCTGCGCTTTGCGCTTGATCCGATAAGTGCTGGATTGCTTGTTCATTGCTAGACTGCTCACTGCTGCTCCCGGAGTGCGCCAGCGTGCATGACGGCGCACAGCACGCGCCATGGTTCCAATCAGTCGAGCTTGGCAATGACGCCGATGGTCAAAACTTAGCAGCAACCATATTCTTGTTGCTGCGGTCTCGGCCTTTCACCCCGAAAAAGAAGAGCGAAGCGGCGAGGTTGAATCTGGAGAAGCGTCAGCGGTCGCCTTTGTGGACGGATTGTTACCCTGAAGGGGTAAATTCCAGACAATCCGGCCACAAGAGAGATCGTAGGATCAACCTCGATGCGCAGTGAACTCTTTTTCCTACGTTCAACCTCGGTGCGCAGTGACTCTTTTTCCCTACTCCAGATCTGAGCCGGTGAGGCGGCGGTAAATGTCGAGATAGCGGTTCGTCGTTTCGGAGACGACCGACTCCGGAAGCGGCGCCGGCTTGCTGTCGCGGTCCCAATCCGAATTCAGCAGGTACGTTCGCACCGGCTCCTTGTCCATGCTGTCGATCTCGGTGTCCAGTGCGTACTTGTCGACCGCCCAGAAGCGGGACGAGTCCGGCGTGAATATCTCGTCGATCAAAATCACTTTGCCGTCGATCAGCCCGAACTCGAACTTGCAGTCCGCCAGCACGATGCCGCGCTCCGCGCAGTAGCCGTGGGCGAACTCGTACAGCTTGACGCTGCGGTCCCGCAGCTCTTCGGCCAGCTCGGCGCCGACGAGCTCTTGCATCCGAGCAAACGGAATGTCTTCGTCGTGTCCGACGTCGTTTTTGGCGGCCGGGGTGAAAATCGGCGCTTCAAAACGTTCGTTTTTGCGCATTCCGTCCGGCAATGCGATCCCGTTGATCGCTCCCGTTTGCTGGTATTGTCTCCAACCGCCGCCTGTGATATAGCCCCGCACGACACATTCGATGTCGATCCGCTCCGCTTTTTTCGTCACCATGATCCGGTTGCGGAGCAGTTCCTTGTCGGTGACGAGGTCCCCGAGCCGGTCCACATCGGTATGAACGACGTGGTTCGGCTGGATGTCCGCCGTCTGCTCGAACCAGAAGGCGCTGAGACGGTTCAGCACGTTGCCCTTCTGCGGCACCGCCGGGTCCAGCACGTAGTCAAACGCGCTGATCCGGTCGGTGACGACGATCAGGTAATGCTCCCCGAGATCGTACAGCTCGCGCACTTTGCCTTTGTACAGCAGCGGCGCTTTGACGATGTCCACAGCCGTGGACAGAGCGTTCTGCGTCATCTTTTCTCAACCGCCCTTCTAGCTCAGACCGAGCCGTTTGAAAATGGTGTCCACATGCTTGAGGTGCCACGACGGGTTAAACGCATCGTCGATTTCCTCGGCCGTCAGCTGCGACGTAATTTCCGGCGTCGATTCGATAATGTCGCGGAACTGGCGCTGCTCTTCCCACGCCTGCATCGCGCGCGGCTGCACGGTATCGTACGCCTGCTCGCGGCTGAAGCCTTTGTCGATCAGCTTCGTCATGACGCGGCCGGAGAACGGCACGCCGTACGTGCGCTGCATGTTGCGCTTCATGTTTTCCGGGAACACGGTGAGGTTCTTGATGATGTTGCCCAGACGGTTCAGCATGTAGTTCAGCAGCATCGTCGCATCCGGCAAAATGACGCGTTCCACCGACGAGTGGCTAATGTCGCGCTCATGCCACAGCGGCACGTTCTCGTAAGCGGAAATCATATGGCCGCGGATGACGCGCGCAAGGCCGGAAATGTTCTCGCAGCCGATCGGGTTGCGTTTGTGCGGCATCGCCGACGAGCCTTTTTGGCCTTTGGCGAACGGCTCTTCCACTTCGCGGAACTCGCTTTTCTGCAGGGCGCGGATTTCCGTCGCGAACTTGTCGAGCGAGGTGGCGATCAGCGCCAGCGTCGCCATATATTCGGCATGGCGGTCGCGCTGCAGCGTCTGCGTGCTGATCGGCGCCGGCTTCGTGCCCAGCTTGCGGCAGACGAACTCTTCCACGAACGGGTCGATGTTGGCGTACGTGCCGACCGCGCCGGAGATTTTGCCGAACTGAACGCCGTCCGCCGCATGCTCGAACCGCTCCAGGTTGCGCTTCATCTCTTCGTACCAGAGCGCCAGCTTGAGGCCGAACGTCGTCGGTTCCGCGTGCACGCCGTGCGTCCGTCCCATCATCGGCGTATCTTTGTAGGCAATCGCCTGGCCGCGCAGGATGTCGATGAAGTTTACAATGTCGCGCTGCAAAATTTCGTTCGCCTGGCGAAGCAGGTAGCCCATGGCGGTGTCGACGACGTCGGTCGACGTCAGACCGTAATGCACCCATTTGCGCTCGGGACCGACCGTTTCGGATACGGCGCGGGTAAACGCGATTACGTCATGGCGCGTGTCCTGCTCGATCGCATAAATCCGGTCGATGTCAAAGCTTGCTTTTGCCCGCAGCGCTTCGACGTCCTCCTTCGGAATAACACCAAGCTCCGACCACGCTTCGCATGCGCAAAGCTCGACTTCCAGCCACGCCTGAAATTTATTCTGTTCGGTCCAAATCGCTCTCATTTCCGGTCTGCTGTAACGCTCTAACAT

Protein sequences of DBSCAN-SWA_1

>NZ_CP011058|1508270:1519552|1510782_1511826_-|WP_045669777.1|DBSCAN-SWA
MAEAYKQAGVDIAAGNEAVERMKKHVKRTFRPEVLTDLGGFGALFGLNKDKYEEPVLVSGTDGVGTKLKIAFAMDKHDTIGIDAVAMCVNDIVVQGAEPLFFLDYLACGKVEPEKIEAVVKGISDGCVQSGCALIGGETAEMPGMYQADEYDIAGFTVGIVDKKKIIDGSTIAPGDAVIGFASSGIHSNGFSLVRRLLLDNAGYSLQDTLPELSGAKLGDVLLEPTKIYVKAALELIKRVQVKGMAHITGGGFIENIPRVLPEGVNVEIEYGSWPIQPVFKLMQMKGAVTNRDMFTTFNMGIGLIAVVPADQAEAALAAAKELGEEAYRIGTVTEGSRIVTFTGAEV
>NZ_CP011058|1508270:1519552|1518256_1519552_-|WP_045669783.1|DBSCAN-SWA
MLERYSRPEMRAIWTEQNKFQAWLEVELCACEAWSELGVIPKEDVEALRAKASFDIDRIYAIEQDTRHDVIAFTRAVSETVGPERKWVHYGLTSTDVVDTAMGYLLRQANEILQRDIVNFIDILRGQAIAYKDTPMMGRTHGVHAEPTTFGLKLALWYEEMKRNLERFEHAADGVQFGKISGAVGTYANIDPFVEEFVCRKLGTKPAPISTQTLQRDRHAEYMATLALIATSLDKFATEIRALQKSEFREVEEPFAKGQKGSSAMPHKRNPIGCENISGLARVIRGHMISAYENVPLWHERDISHSSVERVILPDATMLLNYMLNRLGNIIKNLTVFPENMKRNMQRTYGVPFSGRVMTKLIDKGFSREQAYDTVQPRAMQAWEEQRQFRDIIESTPEITSQLTAEEIDDAFNPSWHLKHVDTIFKRLGLS
>NZ_CP011058|1508270:1519552|1511886_1513416_-|WP_082083652.1|DBSCAN-SWA
MSDAITGSTIEERKVSRTEAEELEFLRGTWGDGHYNEGIGRDDIFDKLREECGVFGVFGHPDAASLSYYGLHALQHRGEESAGICTVEDNGEFHYHRGMGLVKEVFTKDQLDNLVGSRAIGHVRYSTSGGSGLANAQPLIFKYRGGDLAVATNGNIVNAPAIRRELEAQGSIFQTTSDTEVIAHLIARSPKDFVEAAKDALQRIIGGFAFLIMTNDKLLVASDPNGLRPLVMGRLGEGYVFSSETCSFESIGAEYVRDVKPGELLILDDKGIREDRFEPMEKRASCVMEYIYFARPDSDINEVNIHSARKRMGRQLALESFVDADIVTGVPDSSISAAIGYAEQTGIPYELGLIKNKYTGRTFIQPSQELREKGVKMKLSAVRKVVEGKRVVMIDDSIVRGTTSLRIVNMLREAGATEVHVRISSPPFANPCYYGIDTPDRKELIASEKTTEEIRKAINADSLYFLSEEGLMKSVDPSGEKANAGLCMACFTNDYPTPVDEDSTKSCSC
>NZ_CP011058|1508270:1519552|1513400_1515644_-|WP_045669778.1|DBSCAN-SWA
MAQQLTAKEPTTEQIAEQKIYHQFGVSDHEYELICGFLGRKPNYTEIGVFSVMWSEHCAYKNSKSILKKFPVTGDKVLMGPGEGAGIVDIGDNQAVAFKIESHNHPSAVEPYQGAATGVGGIIRDIFSMGARPVALLNSLRFGRLENDRVKYLFEHVVGGIAGYGNCIGIPTVAGEVMFDPSYEGNPLVNAMCVGLIDHDKIQRGVAKGVGNPVFYVGPATGRDGIHGATFASVELSEESEEKKTAVQVGDPFMEKLVMEATLELIDSGIVLGIQDMGAAGLTCSSAEMASKAGNGLELYLDEVPQREEGMTPYEMMLSESQERMLFVVEPQHEAQAKEIFDRWGVICKKVGKVTDDGRLRLFHKGEEVGDMPVTALVDECPVYDPPSKEPAYYSENAAVDASAFEEITDLNGALEKVLGSPTVASKEWVYNQYDYMVRTSTAVRPGSDAAVVTVAGTRKALAMTTDCNGRYVYLDPEVGGAIAVAEAARNIVCSGATPLAITDNLNFGSPEKPEVFWQIVKAADGMSEACRTLDTPVIGGNVSLYNENAKGAIYPTPVIGMVGLVEDLDHITTQDFKAEGDVIILVGETKAEFGGSELQYVLHGAPTGRPPQLDLALEKKTLDAVLSAIREGLVASAHDLSEGGLAVAVAESCFSGRLGASVNVETTLRADHALFSESQSRILLSAKPEKAAALKARLGEQGIAYAEIGTVGGHNLIMNINGKPGVNAPVEQFQKVWKDAIPCLMQ
>NZ_CP011058|1508270:1519552|1516319_1516562_-|WP_045669780.1|DBSCAN-SWA
MKATVYVTIKENVLDPQGSAVQGALHSLGFAEVNNVRIGKYMELNLDTNDRAEAEERLKAMCEKLLANTVVEDFRFELEG
>NZ_CP011058|1508270:1519552|1517344_1518238_-|WP_045669782.1|DBSCAN-SWA
MTQNALSTAVDIVKAPLLYKGKVRELYDLGEHYLIVVTDRISAFDYVLDPAVPQKGNVLNRLSAFWFEQTADIQPNHVVHTDVDRLGDLVTDKELLRNRIMVTKKAERIDIECVVRGYITGGGWRQYQQTGAINGIALPDGMRKNERFEAPIFTPAAKNDVGHDEDIPFARMQELVGAELAEELRDRSVKLYEFAHGYCAERGIVLADCKFEFGLIDGKVILIDEIFTPDSSRFWAVDKYALDTEIDSMDKEPVRTYLLNSDWDRDSKPAPLPESVVSETTNRYLDIYRRLTGSDLE
>NZ_CP011058|1508270:1519552|1510168_1510783_-|WP_045669776.1|DBSCAN-SWA
MAKLRIAVFASGQGSNFQALADAALAGKLDGSIELLVCDKAAAPVVERARRAGIDTWLFKPKEYASREQYEEEILAELIRRGIDLIVLAGYMRILTPVLVEPFYGRMINIHPSLLPAFPGVNGIRQALEYGVKLTGVTVHFVDGGMDSGPIIAQRAVEIADSDDEASLAERIHAAEQALFPWVVQMIAEGRVALGGRRVTIRER
>NZ_CP011058|1508270:1519552|1508270_1509818_-|WP_045673058.1|DBSCAN-SWA
MTIRRALISVSDKTGIVEFSRQLAEQGVQIISTGGTFSLLEKEGVPVTGISDVTGFPEILDGRVKTLHPAVHSGLLAVRDDEEHQKAMKELGLDYIDLVVVNLYPFAQTIAKPDVTYEDAIENIDIGGPTMLRSAAKNHAFVTVVVDAADYGAVLDEIKAQGDTTLETRKRLAAKVFRHTGSYDALISDYLSKQVGEPLPERYTVTYEKVQDLRYGENPHQKAAFYRKPLAASGNITTAEQLHGKELSYNNINDANAALAVLKEFDEPAVVAVKHMNPCGVGIGTNIHEAYQKAYAADPTSIFGGIVAANRTIDAATAALLSEIFLEIIIAPDFAPEALEILTRKKNIRLLKLGEFTSAAERKPEWLVTSVDGGMLVQESDVHTISADDLKVVTNRKPTDEELKQLLFGWKVVKHVKSNAILLAKDDMTIGVGAGQMNRVGAARIAIEQAGEKSQGSVLASDAFFPMGDTLELAAKAGITAVIQPGGSVRDEESIAVANANNIAMVFTGVRHFKH
>NZ_CP011058|1508270:1519552|1515621_1516314_-|WP_045669779.1|DBSCAN-SWA
MKFAVIVFPGSNCDIDCYKAVEAIGQPVDYVWHTATDLSDYDAILLPGGFSYGDYLRCGAIAQFAPVMGEVVKAAEAGKLVLGICNGFQVLTESGLLPGKLMRNRNLKFLCHQSELEVMSNKTPFTNQYSEGEVINIPIAHGEGNYYCDEETLAKLEANGQIVFRYANGGNPNGSLRDIAGICNERGNVLGMMPHPERAMDQLLGSEDGKRMFTSILNAWREKNGAAVNG

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045673058.1|1508270_1509818_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	2.9e-73	51.0
WP_045669776.1|1510168_1510783_-	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	2.4e-26	38.2
WP_045669777.1|1510782_1511826_-	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	1.6e-70	47.0
WP_082083652.1|1511886_1513416_-	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	1.4e-51	31.7
WP_045669778.1|1513400_1515644_-	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	5.8e-155	41.6
WP_045669779.1|1515621_1516314_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_045669780.1|1516319_1516562_-	phosphoribosylformylglycinamidine synthase subunit PurS	A0A0E3FJ99	Synechococcus_phage	2.8e-07	36.4
WP_045669782.1|1517344_1518238_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A0M4JBD3	Mollivirus	1.6e-39	32.8
WP_045669783.1|1518256_1519552_-	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	3.7e-21	26.3

Sequences of DBSCAN-SWA_2

Nucleotide sequences of DBSCAN-SWA_2

>NZ_CP011058|5322543:5334996|DBSCAN-SWA
AATGCGTCCGCAACGTAACCGCACAGACAGCCGAAACGAGGGCACAGGCAGTATCGCTCCCGCCGTATCCGGCAACAACGCGATACCGGGAAAAGCGTCTTTCAAAGGCATTCTCGCTTATGCCAAGCCGCACCGCAAAACATTCTTCGGCGTCTTCGGCTGCACGCTCATTGCCATTTCCGCCGATTTGCTGCAGCCTTATCTCGTCAAAATCGCCATCGACGACAACCTGATGATCGGCCGCAACGATTACGGCATGCTGCTTATTATTTGCGGCATTTATTTGCTGCTGTCGCTGCTCAGTTTCCTGTTCTCCTATTTGCAGAGCAACCTGATCCAATTCGCCGGCCAGAGCATCGTCGCCCGCATCCGCAAAGATCTGTTTGCGCATATTACGCGGTTGTCTCCGTCGTTTTTCGACCGCTTCTCCAGCGGAAGCCTCGTCACCCACGTGTCGAGCGACACCGAGACGATCAACCAGTTTTTTACGCAAGTTTGTCTCAGTCTCATGCGCGACGGTATGACGTTAATTTTTATTATCGTGCTGATGTTCCAGCTCGATCCCGTATTGGCCGGATACAGCATGTTGCTGCTGCCGGTCATTGCGCTGATTGCGGTCTCGTTCCGCTCCTATATGCGCAAAACGTACCAAGCGTCACGTTCCCGGCTCTCTCGCCTGATCGCTTTCGTGGCGGAAAATTTGGCAGGCATGAACCTTATTCAGGCGTTTCACCAGGAAAAGGAGCAGCAGCTCGAGTTTGACGAGCGGAACCGGTTCTATTACAAAGCGAATCTGCGGGAAATCCGCACAAGCGTGCTCTTCAACCGTTCCTTCGATCTGCTCGGCAATCTGTCCATCGCTTTTTTGACGTGGATCGGCGGCAGGGCGGTTTTTCATCACACGATCGAATTCGGCGTCTTGTACGCGTTCATTACGTATATCCGCCAGTTTTTTCAGCCGATCAACGCCATTACCCAGCAGTGGAACACGCTCCAATCGGCGTCGGTTTCAATGGAGCGGATCTGGAATCTGTTCCGCACGGAACCGGATGTGAAGGAAGCAGCCCGCCCATTATCGATGCCGGAATCACCAGTTCAGGGGCAAATCGATTACAACCGCGTCGTGTTCGGCTACAATGCGGAGGAACCGGTGCTGAAGGGGCTCGAACTTCATATCGCCCCTGGAGAAATGATCGGGATCGTCGGCACGACGGGCGCGGGCAAAAGCTCGCTGATCAGCCTGCTGTGCCGGTTTTATGACGTGCAGCAGGGCAGCGTGCGGATCGACGGCACCGACATCCGTGACATTCCGCTTGAGCAGCTGCAGCGGACGGTCGGGCTGGTGCAGCAGGAGCCGTATCTTTATTCCGGAAGCATCCTGGATAATGTGAGGCTGTTCGATGAAAGCATATCGAGGGAAGATGTCATTAGCGCCTGCCGTTTCGTCGGCGCGGACGATCTGGTGCGCAGGCTGCCCGCAGGCTATGAAACGATGCTGTCGGATAAAGGAAGCGGCTTGTCGGCCGGCGAAAGGCAGCTGATATCGTTTGCCCGGATCGTCGTATTCCAGCCGGCCATTCTTATACTGGACGAGGCGACGGCCAATCTCGATTCCCGGACAGAGCAGACGGTGCAGCAGGCGCTGCAGGCGGTTTCCAAGGGCAGAACGACACTTGTTATCGCCCACCGCCTCTCCACCGTTATGGGGGCCGACCGCATCATCGTAATGAGCGCCGGCATGATTGTCGAGGAAGGTACGCATGCGCAGCTGCTGCGCATGCGGGGTTACTACGAGCAGCTGTACCGGCATTCGCAGGGCAGCGCCGAGATGGGGATCGGGTAGCACGTATTTAAAAATAGAGCGGAAGACAGCGGTTGTAACCGGCTGTCTTCCGCTTTTTTAAATCTCCACCTTCATCCCCGTGCGCGCAAACTGCATTTGTTGCGGAAGTTCGTAGTCTTTGCGCAAATCAATGTCATGAGACAGATGAGTCAGTATCATTCGGCCCGGACGAAGTTCGTTCAGCAGCTCCATCGCTTCCGTTACGTCATATACCGACCGCGTTTCGTACGGATACGGTTCGTGATAAAAGCTGGTGCCCAATATGAACAAATCAAGGTCTTCGAAAGGGCGCTTCTGCTCCGCTGTCAAGCCGATCGAATCCGAGCAGTAAGCAAAGGCTCGCCCCGTCGTTTTATGTTCAAAACGGAAGGCGTAGGCATAGCCGTTTTTCCCATGATGAACTCTCCACGAGGAGACCTCCCAGTCGCCGAACATACGCGGGGCGTCCAGTTCATGGAAATCGATCTGTCCCTTCAACCATGGAAAGCGTCCCAACACTTCGGCAATAACCTCGGAAGGCGCATATGCCTGTCCTCTCGATTCGGTCCAGCGGCAGGCGTCCGCCCACTCGACAAGCCCGCCGATATGATCGAAATGAGCATGCGTGATCAGGATCCGCTTCGTTTGCCGCAGTCCCGCCGCCTCCATCTGTCTTCCCCAGTCGGGGCCGCAGTCAATGAGAATCGTGTTTTCTTCCTCGGTTCCATCCAAACCGTCAATCTGCAGCAGCGAGCGCAGCCTGCGGTTGCCGCCGACGGCCCGCGCCTCCTCGCAAACGGCGCAGGGGCAGTATACACGGGGCACTCCCATAGAGTCTCCGGTTCCCCGAAACGTTAATATAGCCACGGCTGTTCTCCCTTTTCATCGCTAAGTTTTGTCTATATGAGCATATCATTGTTGCTCATATTTGCGCAAAATATTGGCCGGAATTGTGCATTTCAAGCGTTATCAACCACCATCAGCCATAAACGCGTTGCATGAATAAGCACCGCTTGGGTCCGTTACAATATTCATGCGCTTTTTATTTCCTGCAAAAAAGCATCTGCCGAGTCCGAAAGGAATGTTTATTCATTTAGAATTAGAAAATTCTCACTCAATTCTCATAAAGACGTCTGAGACGCCGTAGATCAACACTTCCATCCTTCTTGGTAAATATTAGGTTATATAAATTATGGTAAAGTAACACTCAGATAAAGGATATTTCAGTCAGCATGATGGAGGGACAACAATAACTATGCGCAGCATGAGATGGATTCGTAAAGTCGTCGGCGTCAGCCTCTGCGCCGCCATCGGGTTTTCCTCGTTTGCTTTCGGCACTTCCGACAAGGCAGAAGCCGCCACTCCGAAAGCGGAAAAAATCCTCAAAACGGGCAAACAATATTTGGGCGTCAAATACCGCCTCGGCGCTCCGAGCGGCGTTACATACGCATTCGATTGTTCCTCGTTCATTCAATATATTTATAAGAAAAACGGAATTTCCCTTCCGCGGACGACACGGCAGCAAGTCACAAAGGGCAAAAAAGTTTCGCGCGGTTATTTGAGCAAAGGCGATCTTGTTTTCTTCACCGGCAGGTCGGGCAGGAGCATCGGCCATGTGGGCGTTTATGCAGGCGCTAACCGGATCTTGCATACATACGGCAAAACCGGAGTCACCATATCCAGCTTGGGTACATCTTATTGGAAAAATCATTACGCAACGGCACGCCGCGTCATCCTTTAGATAAACGGCTGAATACTGCCAATTGGTACCACCAGGATGAGTCAACCGCAGCAAAATGCAAAAGAACCTTCAGAACCACTATATATCGTGGGACTGAAGGTTCTTTGCATGTTATGGGAAAAACAGGGGCTGCTGCGTCGAATTACGAACGGGTAATGTCGGGAAACTGCAGCGTGATGGTCGTTCCTTTGCCGGGCTTGCTGAACACGTCGATCTGGCCTTCGTGCATATCGACGATCCGCTTGGCGATCGACAGTCCGAGCCCGACGCCGCCGGTCGTTCTTCTGCGCGCGCCATCCACCCGGTAAAACCGTTCAAACAAGAACGGGATATCATTTTCGGGGATGCCCATCCCTTTGTCCGTCACCAGAACACGCACCGTATGCCGGACGGAGCTGATCGTCACATCGATCGGCTCTTTGCTGTATTTAAGCGCATTGTCCAGCAAAATGACGAGCAGCTGGCGGATTTTGTCCTTGTCTCCGGTCATCTTCACGCCGGTTGCGACGGTGTGAACCCGGATTGGCCGCTGAAACGTGGCATGCAGCATTCCCGCCAGCTCGTCCACGAGCTGCACGACATCGAACGTTTGCAGGTTCAGCCAATCCTCCTGCTCCGCTTCCGCCAGCATAAGCATCGACTTGGTCAAATTTTGCAGCCGCTCCGCTTCCTTCGCGATCGCCTCGATCGCTTCGTTGCGCACGTTAACGTCGTCACTGCCCCACCGCTTCAACATGCCCGCATAGCTGCTGATGACCGTCAACGGTGTCTTCAATTCATGCGAGGCATCGGCGACGAACTGCTTCTGGCGCGCAAAGGTGCGGTCGAGACGGTCGATCATCTGGTTAAACGCCCGGATCAGCTGCAGCAGCTCTGCCGATTCCTCCTTGTCTCCCATCTCGATTTTGCGCAGCTTGCCGCTGCGGTCGATCTCCCGCATTGTCTGCACCATATGCTGGATCGGCGCAGTCAGACGCGATGTGAACCAGTACGTGCCGAAGATCGCAAACAGAATCGCTCCGCTGCTCGTAACGGCAAGCGCCACGACCAGCACCTGCAGATAGCTGTCGAGCGAATTCAGCTTGCGGTCGATCTCCAGCATCCCGATAATTTCCGTTCCGACATAAAGCGGAAACTTCGTATACAGGACCCGTTTGCCCGAAACCCTCATTTGCCCGGATTGGTGGATCGGCTGAAAGGTGGCGGGAATGGAAAGCAGCTCGTTGTCCGAGCCTTGAACGTTGACGGTCTTGCCGCTTGGCGTCACGATGCGGATTAACTCGTTCACATTATAAAATTCCCGGAGCAGCCCGGGATCGGCCAGCTGGCCGGCCGATTGAATTTTCGTGTTCTCCAAAATTAAGTTCATTTTGTTCGCCATCAGCTGCTGTTCGCTGCGCGTCGTAATTTTGATGACAAACAAATAAACGAAAATATTAAACAAAATCAGAATAAAAATAAGCCAAAAAATTGTAAATAAAGTAAACCGCTTGCGAAGAGTCATGCGTCCGGCTCCTTCATCATATAACCGACGCCCCGTACCGTATGAATCAGTTTATGGCGGAACCCTTTGTCCAGCTTCTGACGCAAGTACCGGATATAAACATCGACCAAATTTGTTTCGCCCATGAAGTCGTAGCCCCATACTTGCGACAAAATATCTTCACGGGATTTTTCCTCGTTCTTGTTCTCCGCCAAAAAAACGAGCAGCTCGAATTCCCGCGGCGTCAAATCGATGGCCAGCTCTTTGCGGTACACTTTGCGGGTGCGCAGCTCGATCGTCAAATCGCCGATCTTGATCAGGTCGGAGCCTTCCGATTCCTTCGGATTTTGCTGAAAAATGCGCAGCAGATTCCGTACCCTGGCGAGCAGCTCCTCCATTGCAAACGGCTTCGTCACATAGTCGTTGGCGCCGTGCTCAAAGCCGCTCACTTTGTCCGGCACCGTGTCGCGGGCAGTAATCAAAATAACGGGAATCGGATTGCCGGCCTGGCGCAGCCGCCTCAGCACCTCGATGCCGTTAAGCTCCGGCAGCATCACATCCAGCAGCACCAGATCCCATTCGTTGGAAGTGGCCATCGTAAAGCCCGTACGGCCATCGGTCGCATGTCCGACCGTATACCCTTCATGCTCGAGCTCAAGCTGCAATACACGTGCGATGCTTTCTTCGTCTTCAATGACCAATACGCGTTCATTCATCTTGATGTCTCACCTTCGCTCCTCCGGTCTTTCGTCCGTAAGAAGGACGCTATCTGTTATGCGCAAAGCAGCCTAAAAGTTGAAGAATCTTTTTCATCTATCGTAAAAAGAACGGCAGTCGCAATCAAACGGAGCTTAAGCGTTCATCGACCACGTCTCCACGTCCCACACCTTGGTCACCCAATCCTCGTAAAAATCGGGTTCGTGGGAAACGAGCACAACCGTGCCCTTGAACGCCTTCATTGCGCGCTTCAGTTCTTCTTTGGCCACAACATCCAAGTGGTTGGTCGGCTCGTCAAACGCAATCCAATTGCTTTCGCGCAGCATCAGCTTGCACAGCCGCACTTTGGCCTGCTCGCCGCCGCTGAGCTGATTCAGGTTGCGGGTAATATGCTCGTTTTTCAAGCCGCAGCGAGCCAGCGCGGCGCGAACTTCATGCTGGTTCATATGCGAAAATTCGTTCCACACGTCGTCCAGCGGCGTCATTTGCTGCGCCTTAACTTCCTGCTGGAAATAAGCCGGCAGCAAATAGTCGCCGTGGTAAACCGTACCCCCGAGCGGTTCGATCACGCCGAGAATCGTCTTCAGCAGCGTCGATTTGCCGACGCCGTTGCAGCCGACGATGGCGATTTTGTCTCCGCGTTCGATCAGCATGTCCATCTTCGGCAGGAGCGGCCGGTTGTAGCCGATGAGCAGCCCGCTGGCCTCGAACACCGTCTTGCCGCTCGTCCGGCCCTCCTTGAAGTTGAACGTCGGCTTGGCGGCTTCTTCCGGACGGTCGATCCGTTCGATCCTGTCAAGCTGCTTCTCCCGGCTCTTCGCCCGGCCGGAAGTGGATGCGCGCGCCTTGTTGCGCTGGATGAAATCTTCCTGCTTGCGGATATAATCCTGCTGCTTCTCATACGCATCGATATGCTGAGTTTTATTGATTTCCGCCATCTCCAGAAACTTCTCGTAGTTGCCGGTATAACGATTAAGCTTTGCAAATTCGAGATGATAAATAACATCGACGATCTGGTTCATAAAGGAGGTGTCATGGGAAATCAAAATAAAGGCATGCGGGTAATTGCGCAAATAACCGGCAAGCCACGAAATATGCTCATCGTCCAAATAGTTCGTCGGTTCGTCCAGAAGCAGTACGGTCGGTTTTTCCAGCAGCAGCTTTGCCAGCAGCACTTTCGTGCGCTGCCCGCCGCTGAGCGCGGCGACGTCGCGTTCCAGTCCGATCGCGTTCAAGCCGAGACCGTTAGCCATTTCATCGACCTTCACGTCCAGCAGGTAGAAATCGCCGATTTCCAGCTCCTCCTGGATTTCGCCCATCCGTACAAGCAGCTCCTCCAGCTTGTCGGGATCGGCATCGCCCATCGCTGCGGTTACTTCGCCGAGCTCCTGCTCCAGCTTAAGCAGCGGCAGGAAGGCTTCCTTCAGCACATCGCGGATCGTTTTGCCAGGTGTCAGCTTCGTATGCTGGTCCAGATAGCCGTACTGAACCTTGGGCGTCCATTCCACCCTGCCCTCGTCTTTGAGCAGATTGCCCGTCAAAATATTCATCAGCGTCGATTTGCCGGTGCCGTTGGCACCGACGAGCCCGACATGCTCGCCAGGCAGCAGACGGAACGAAACGTCCTTAAATAATACACGGTCACCGAATGTATGGGATAAATGTTCAACTGTAAGCAAACTCATTGCTGAATCTCCGTTTCTGTATAAACTTGTTCACATAGAATGAATCCCGACTATTGTACCATACGTTGAGGGTTAATGGATATTTTCATCGCAAATTGGGCGTTTCCGTTTGTTGTTTGCGCACCATATCGACGATCAGTCCGGTCACCCGTCCCAGCGCCCGGCCTACCGGCGCATACAGCTTGGGCGCATCATTCAGCCAGCCGCCGCTCCAGAGCTGCCGGTTCCATTCTCCGGTCGGCAGATGAGGCACGACGGCCGCCGGCGCGGACGGCAGCAGCCGCAGCCACTGTTCCCGCTGGGGAAATGCGGCGTCTTTGTTCGCGATCCATACCGTTTGCCGTCCCGCCTGCTCCCTCTCGCGGACAAGGTCGCGCATGACGCGCATCCGCTCAATCGTCCATCTTGCGGGGTTCGGATCGGCAACGACAACGAGCAGATCGGACGCAAGCAGCCCGTCTCTTCCGCTGCCGCCGAGCCAGCGCGACGAATAATCGACGACCGCCGCCGCTTCCCGCAACCCTGCCGCTAGCAGACGAAATTTCAAATCGTCATCCCGGCTATCCGTTTGCCTTGCGTGCGGCAGCAGCGTTTTCCACGTAACGCCTCCGTTTTTCCAGCCGGCATAACGGCTGTCCGCCTCAGACGGGTGCCCGCCCGGAGGGGAATGCCTATCTCCGCTTAGCAGCGCGTACCACTCCGGCTCGCAGACGGGGGCTTCAACCGCGGCGCAAGGAATTCGTTTATCCGCCAGCATATGAGCGAGCGTGATCGCAATGAATGTGGCCCCCGCGCCGGGGGAGATCGAGGCGACGGCTGCGGTCGGCGCAGTAATTGCGCCTTCGGCAGCGATATGGCCGGGCAGGATCCGTTTGGCAGATTGCCCGCGGTCCGCTACTGTCCCGGAATCGTACCACTTCCGCGGTCTGCGCTCCGCTTCGGTCGCGGGATCGTACCACTTCCGCAGCTCCCGCTCCGCTTCCTCCATCGTCCTGTACCGCAGCTCCTTGCGGCCGGCTACCATCGTTTCCAGCACATCGTTCAGTGGCTGCGGGATGCCCGGAAGGCAGAGGTCCCCGTCCTCCGCCCGGTAATGCCGTCCGCCGCTCAGCAAATAAACGAGCAGCGCGCCCAGTCCGTACACATCCGTCCGCTCGTCGCTCTGCCCTTCCCCCGCCTGCTCCGGCGCGGCGAAACCGGGCGTGCCGAGCAGAGCCGTATCTCGAAGCGAGCCGTCCTTGTAAGTGCGCGCAATTCCAAAATCGATCAAACGGACGTTTCCACGTGAATCAATCATAATGTTAGACGGCTTCAGGTCCCGGTGCACAATCGGCGGATGCTGCCGGTGCAGGTACGTAAGCGCTCCGCACAGCTGCAGCGCAATCGACAGCGCTTCCTTGAGGGGCACTGCGCCTCCCGATGCGCGAAACCGCTGCTCCAGCGTGACGCCGTCGATGTAATCCATTACCATAATTTCCATCCCGTCTTCATCAGGCGGAAAATAATCGAGCAGGTGCGGCAGATGCGGATGGCTGAGCCGCATCAGCAGCTCCGCTTCCTCCGCGCAGCCGCTCCTGTCGGAAAGGTTAACGGCATGCGTCTTTAACGCCCTTAATTTTCCTTGCAGCCGCAAATCCTCGGCGGCATATACACGGCCCATTCCGCCCTGTCCGATCAGGCAGCTGATGCGGTAACGTCCTCCTACGAGCGTTCCAATATCGAGCAGCCGCTGTTTCCGGGACCACTCGCGATTATCGTGATTCATCGGATCATCCTCCTTGCGAATTATGCATGAGCCGGCGACCAGGCTTATCCGTCTGGTGTCAATAAAAAAAGCATCCCGAAACCGGCGCGGCTGCCGCGCGGCTTCGGGATGCTTTCCCGTTCGGAAGTTTTTTCTAAGCACTTTGATCTGCTTCCGAGATTACCTTCAATCAGACTATATCTTCTTGCTTATTTCCTTGCTTACTTCTTGCTTATTCCAGTGCTTCTAAGAATCCTTCGACTTACTTCTTCGTCAAGTAAAGCGTAATTTCCTCCCGGTTGTGAAAAAGCTGCTTCGCCCTGTTTACCGTAAAGGACTCTTCCAGCTTCGCGATTACGTCCCGGATCGTTTGCAGCGGCTTGCGGTGCATCAGCTTGACGGTGACGATCGCTGCGGCGCCGGCTTTCAGCGACGGCGTCAAATCGAGCACCAGCCTGCACATTTGCATCGGACTCCAGCTCATGTCGCAAACGAGCAGATCGAAAGTTTCCGGGACAAACTTAACTTCGGAGGCGTTCTTTTTCAGCACGGTCAACGTCCGGTACTGAAGCAGCGAAGGATGCAGCTCGGCCGGATCGACGGCCGTCACGCGCAGTCCCCTTTCGAGCAGAAGCGACGTCCAGCCTCCCGGAGCTGCACCGATATCGAGCGCTTCGGAAAAGTCGGCATAGTTAAGCCCGAACTCCCGCTCCGCTTCCAGCAGCTTAAATTTCGCGCGCGAAATCTGGCCCTCTTCGCGCTGAAACCGGACCGCCCCTCCTGGCCAGTCCGAAAGCATGTCTGCAACCGAGCCGATGCCGATATACAGCTGTTCGCGGCCCGCATAGACGGCGACGAGCATGTCCGGCGACCTGACCTCCGGCTCCGCGCCGCTTTCCGCCAGCACCGCGTCGAGCACTGCTTTCGTATCGGCCGCGGAATAAGCAAACGGACTGCCTTCCGCGCGTCTGACATGAATTCCGGTCCGTTGTCCTTCCAGCTTGGAGCGGGAAAGCCGGACCGCGTCCGACAGCCAGTCCAAATCGTCGGCGTCGCCGGAGATTGTTCTCGATCCGTCAACAGGCTGCAAATAACGCAAAAAAACAGGCTCGCTGCGATGAATTTCCGTCAGCACCTCCTGGCGATCGAGCGGTATTTCCATCTTGAACGTCTCACCCGGAGCCAGCTGCGAAATATTCATCCCCTGGAAACGTTTGCGCAATTCCTCCATCGCATAGGATGCATAATTCCGGTTAGCCGTTCCAATCCAATGACTCACTTTATCCCTCCGCTTTCCGGCTTTACTTTCAGCCACGGCCGTCCATAACTCCAGTCCACCTCCAGCGGGAGCCCGTAGGCGCGGCTCAGCACTTCCGGGGTCAGCACTTCGGTTTTGGGACCGGCGGCGATCACTTCCCCGTCCGCAATGAGCGCAACGTGGGAGAACATCGGCATAATTTCTTCCATATGATGCGTCACATAGATGACCGTCATCCTGCGGGAAGCAAGCTTCTCCGTCTCAAGCAGCAGCTTTTCACGCTCATACAGATCAAGGCCCGAGCACGGCTCGTCCATAATAAGCAGCTCCGGCTCCGACATGAGCGCGCGGGCGAGCAGCACTTTTTTGCGCTCTCCCTGCGAAAGTGTCCCGAAAGGCTGCAAAGCAGCAGCTCCAAGACCGACTTCGTGCAGCAAACCGACCGCTTTGAGGCGTACTTGTTCCGGAATTTCCTGATAAAAGCGTAAAAACGCATATTCGCCGGTTGCGACCACTTCCCACACCGGGTCGCTCAGCGACAGCTTTTCGATGAGCGACTGGCTGATGTATCCGATCCGCTTGCGTACTTCCCTCACGTCGCACTCGCCGAACCGGCTGCCGAGTACGTCGACCGTTCCCGAAGTCGGAAACATATAACCCGTCATCATCTCGAGCAGCGTCGTTTTTCCGGAACCGTTGCGCCCCAGAATGACCCACTGTTCACCCCCCGAAATACGCAGGCTCGCCCCATTCAAAATCGTCCTCTCATCGCGCTGCAAAACTAAATCGTTCATGTCCACAACCGTTTGCGGCGATTGTTCCCCCATCTTCATATCCCCCGTCCTTCGGCCACCTCGCGCAGCCGCTCCTCCCGCATCGGACCTCCGAACAGCTTTACGCCGTCCGGAATATGTCGGGATAACAGCTCATACATCTGCATGCGGCCGGCATCGCTGGAAGTATGCAAGTAAATTTCCTGCGGATATTTCCCGATCTCCACCAAATGCCTGGCGACTTCATATCCTGTCGGCTCTCCCCAGCCCAAATCGTAATCCAGGGACAGAACGCCGATCGGACCTGCTTCGATCAGCAGCTTGCATTCTTCCGCCGTTTTGGCAGCCGTAAACCCTTGCGGGCATTTGCGGAAATCGTCCAAATAAACATGAATCAAGCCCGGTTCCCCCATTCCTGCATCGTCTTCAGCTGAGCTTTATGCGTCCCGTCGCCATCCGGCGCCGTTTCCAGCACAAAAGGCGCTTCCCGCAGCGCCGGAAGCGTGAGCAGCCAGCGCAGACCCGCCTCTCCGATCAATCCGCTCCCAATCTGCGCATGCCGGTCGCGTTTGGATCCGGACGGAAACAGCGAATCGTTGAAATGAACGGCCGCTATTTCCCGGAGCACGCCAAGCTTCTCCGCGGTTTCCGCCCATTTCGCATCCGGGTCGCCCTTCCAGACGCCGCTGGCGAACAAGTGGCACGAATCGAGACAAAACCCGATCCGCTCCGGATTTCGGCTCAAATTCCGGACTTGCGCAAGCTCTTCAAACGTCGTTCCCATATTCGCATGGTCGCCGGCCTGATTCTCAATAAGCAGCTTGGCGCTGCCGTTCCAGTTCGACGTAATTTCGTCCAGCGCGGCGATGATGTTGCGGTAGCCCTGCAATATATCCGGTCCTTTGTAGATGCCGAAATGAACGACGACGCCCACCGAGCCGCACGCCTCGGCAATGTCCAAATCGTTCAGCAGCGACAAAACCGTCCGTTTCCGCACGCCGTCGTCTTCCGACGCCAAATTGCAAGGATATGGCGAATGCGCGACCGAGACGATCCTGAGGCTCCGCGACAAAGAAGCGCAGCGTCCGGCATCTGTGCGGTCAAACGTTTTCGGCGCAAGCGATCGCGGGTTTTTCGGAAAATATTGAAACGATCCCGCTCCAAGCCGCTGCGCTTCCTTTACGGCGGCGGCATAACCTTTGCGGATGCTCAAGTGACTGCCGTACCGCAT

Protein sequences of DBSCAN-SWA_2

>NZ_CP011058|5322543:5334996|5333009_5333819_-|WP_045672488.1|DBSCAN-SWA
MGEQSPQTVVDMNDLVLQRDERTILNGASLRISGGEQWVILGRNGSGKTTLLEMMTGYMFPTSGTVDVLGSRFGECDVREVRKRIGYISQSLIEKLSLSDPVWEVVATGEYAFLRFYQEIPEQVRLKAVGLLHEVGLGAAALQPFGTLSQGERKKVLLARALMSEPELLIMDEPCSGLDLYEREKLLLETEKLASRRMTVIYVTHHMEEIMPMFSHVALIADGEVIAAGPKTEVLTPEVLSRAYGLPLEVDWSYGRPWLKVKPESGGIK
>NZ_CP011058|5322543:5334996|5322543_5324385_+|WP_082084115.1|DBSCAN-SWA
MRPQRNRTDSRNEGTGSIAPAVSGNNAIPGKASFKGILAYAKPHRKTFFGVFGCTLIAISADLLQPYLVKIAIDDNLMIGRNDYGMLLIICGIYLLLSLLSFLFSYLQSNLIQFAGQSIVARIRKDLFAHITRLSPSFFDRFSSGSLVTHVSSDTETINQFFTQVCLSLMRDGMTLIFIIVLMFQLDPVLAGYSMLLLPVIALIAVSFRSYMRKTYQASRSRLSRLIAFVAENLAGMNLIQAFHQEKEQQLEFDERNRFYYKANLREIRTSVLFNRSFDLLGNLSIAFLTWIGGRAVFHHTIEFGVLYAFITYIRQFFQPINAITQQWNTLQSASVSMERIWNLFRTEPDVKEAARPLSMPESPVQGQIDYNRVVFGYNAEEPVLKGLELHIAPGEMIGIVGTTGAGKSSLISLLCRFYDVQQGSVRIDGTDIRDIPLEQLQRTVGLVQQEPYLYSGSILDNVRLFDESISREDVISACRFVGADDLVRRLPAGYETMLSDKGSGLSAGERQLISFARIVVFQPAILILDEATANLDSRTEQTVQQALQAVSKGRTTLVIAHRLSTVMGADRIIVMSAGMIVEEGTHAQLLRMRGYYEQLYRHSQGSAEMGIG
>NZ_CP011058|5322543:5334996|5327605_5328304_-|WP_045672485.1|DBSCAN-SWA
MNERVLVIEDEESIARVLQLELEHEGYTVGHATDGRTGFTMATSNEWDLVLLDVMLPELNGIEVLRRLRQAGNPIPVILITARDTVPDKVSGFEHGANDYVTKPFAMEELLARVRNLLRIFQQNPKESEGSDLIKIGDLTIELRTRKVYRKELAIDLTPREFELLVFLAENKNEEKSREDILSQVWGYDFMGETNLVDVYIRYLRQKLDKGFRHKLIHTVRGVGYMMKEPDA
>NZ_CP011058|5322543:5334996|5331996_5332965_-|WP_082084263.1|DBSCAN-SWA
MEELRKRFQGMNISQLAPGETFKMEIPLDRQEVLTEIHRSEPVFLRYLQPVDGSRTISGDADDLDWLSDAVRLSRSKLEGQRTGIHVRRAEGSPFAYSAADTKAVLDAVLAESGAEPEVRSPDMLVAVYAGREQLYIGIGSVADMLSDWPGGAVRFQREEGQISRAKFKLLEAEREFGLNYADFSEALDIGAAPGGWTSLLLERGLRVTAVDPAELHPSLLQYRTLTVLKKNASEVKFVPETFDLLVCDMSWSPMQMCRLVLDLTPSLKAGAAAIVTVKLMHRKPLQTIRDVIAKLEESFTVNRAKQLFHNREEITLYLTKK
>NZ_CP011058|5322543:5334996|5328439_5329990_-|WP_045672486.1|DBSCAN-SWA
MSLLTVEHLSHTFGDRVLFKDVSFRLLPGEHVGLVGANGTGKSTLMNILTGNLLKDEGRVEWTPKVQYGYLDQHTKLTPGKTIRDVLKEAFLPLLKLEQELGEVTAAMGDADPDKLEELLVRMGEIQEELEIGDFYLLDVKVDEMANGLGLNAIGLERDVAALSGGQRTKVLLAKLLLEKPTVLLLDEPTNYLDDEHISWLAGYLRNYPHAFILISHDTSFMNQIVDVIYHLEFAKLNRYTGNYEKFLEMAEINKTQHIDAYEKQQDYIRKQEDFIQRNKARASTSGRAKSREKQLDRIERIDRPEEAAKPTFNFKEGRTSGKTVFEASGLLIGYNRPLLPKMDMLIERGDKIAIVGCNGVGKSTLLKTILGVIEPLGGTVYHGDYLLPAYFQQEVKAQQMTPLDDVWNEFSHMNQHEVRAALARCGLKNEHITRNLNQLSGGEQAKVRLCKLMLRESNWIAFDEPTNHLDVVAKEELKRAMKAFKGTVVLVSHEPDFYEDWVTKVWDVETWSMNA
>NZ_CP011058|5322543:5334996|5324442_5325231_-|WP_148505297.1|DBSCAN-SWA
MAILTFRGTGDSMGVPRVYCPCAVCEEARAVGGNRRLRSLLQIDGLDGTEEENTILIDCGPDWGRQMEAAGLRQTKRILITHAHFDHIGGLVEWADACRWTESRGQAYAPSEVIAEVLGRFPWLKGQIDFHELDAPRMFGDWEVSSWRVHHGKNGYAYAFRFEHKTTGRAFAYCSDSIGLTAEQKRPFEDLDLFILGTSFYHEPYPYETRSVYDVTEAMELLNELRPGRMILTHLSHDIDLRKDYELPQQMQFARTGMKVEI
>NZ_CP011058|5322543:5334996|5333821_5334163_-|WP_045672489.1|DBSCAN-SWA
MIHVYLDDFRKCPQGFTAAKTAEECKLLIEAGPIGVLSLDYDLGWGEPTGYEVARHLVEIGKYPQEIYLHTSSDAGRMQMYELLSRHIPDGVKLFGGPMREERLREVAEGRGI
>NZ_CP011058|5322543:5334996|5325619_5326105_+|WP_052703128.1|DBSCAN-SWA
MRSMRWIRKVVGVSLCAAIGFSSFAFGTSDKAEAATPKAEKILKTGKQYLGVKYRLGAPSGVTYAFDCSSFIQYIYKKNGISLPRTTRQQVTKGKKVSRGYLSKGDLVFFTGRSGRSIGHVGVYAGANRILHTYGKTGVTISSLGTSYWKNHYATARRVIL
>NZ_CP011058|5322543:5334996|5334159_5334996_-|WP_045673659.1|DBSCAN-SWA
MRYGSHLSIRKGYAAAVKEAQRLGAGSFQYFPKNPRSLAPKTFDRTDAGRCASLSRSLRIVSVAHSPYPCNLASEDDGVRKRTVLSLLNDLDIAEACGSVGVVVHFGIYKGPDILQGYRNIIAALDEITSNWNGSAKLLIENQAGDHANMGTTFEELAQVRNLSRNPERIGFCLDSCHLFASGVWKGDPDAKWAETAEKLGVLREIAAVHFNDSLFPSGSKRDRHAQIGSGLIGEAGLRWLLTLPALREAPFVLETAPDGDGTHKAQLKTMQEWGNRA
>NZ_CP011058|5322543:5334996|5326247_5327609_-|WP_045672484.1|DBSCAN-SWA
MTLRKRFTLFTIFWLIFILILFNIFVYLFVIKITTRSEQQLMANKMNLILENTKIQSAGQLADPGLLREFYNVNELIRIVTPSGKTVNVQGSDNELLSIPATFQPIHQSGQMRVSGKRVLYTKFPLYVGTEIIGMLEIDRKLNSLDSYLQVLVVALAVTSSGAILFAIFGTYWFTSRLTAPIQHMVQTMREIDRSGKLRKIEMGDKEESAELLQLIRAFNQMIDRLDRTFARQKQFVADASHELKTPLTVISSYAGMLKRWGSDDVNVRNEAIEAIAKEAERLQNLTKSMLMLAEAEQEDWLNLQTFDVVQLVDELAGMLHATFQRPIRVHTVATGVKMTGDKDKIRQLLVILLDNALKYSKEPIDVTISSVRHTVRVLVTDKGMGIPENDIPFLFERFYRVDGARRRTTGGVGLGLSIAKRIVDMHEGQIDVFSKPGKGTTITLQFPDITRS
>NZ_CP011058|5322543:5334996|5330075_5331755_-|WP_148505298.1|DBSCAN-SWA
MNHDNREWSRKQRLLDIGTLVGGRYRISCLIGQGGMGRVYAAEDLRLQGKLRALKTHAVNLSDRSGCAEEAELLMRLSHPHLPHLLDYFPPDEDGMEIMVMDYIDGVTLEQRFRASGGAVPLKEALSIALQLCGALTYLHRQHPPIVHRDLKPSNIMIDSRGNVRLIDFGIARTYKDGSLRDTALLGTPGFAAPEQAGEGQSDERTDVYGLGALLVYLLSGGRHYRAEDGDLCLPGIPQPLNDVLETMVAGRKELRYRTMEEAERELRKWYDPATEAERRPRKWYDSGTVADRGQSAKRILPGHIAAEGAITAPTAAVASISPGAGATFIAITLAHMLADKRIPCAAVEAPVCEPEWYALLSGDRHSPPGGHPSEADSRYAGWKNGGVTWKTLLPHARQTDSRDDDLKFRLLAAGLREAAAVVDYSSRWLGGSGRDGLLASDLLVVVADPNPARWTIERMRVMRDLVREREQAGRQTVWIANKDAAFPQREQWLRLLPSAPAAVVPHLPTGEWNRQLWSGGWLNDAPKLYAPVGRALGRVTGLIVDMVRKQQTETPNLR

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_082084115.1|5322543_5324385_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	6.4e-43	25.4
WP_148505297.1|5324442_5325231_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_052703128.1|5325619_5326105_+	C40 family peptidase	A0A1W6DXV0	Rhodococcus_phage	3.6e-06	34.7
WP_045672484.1|5326247_5327609_-	HAMP domain-containing histidine kinase	Q8QKV7	Ectocarpus_siliculosus_virus	5.1e-13	27.6
WP_045672485.1|5327605_5328304_-	response regulator transcription factor	W8CYM9	Bacillus_phage	5.0e-33	33.8
WP_045672486.1|5328439_5329990_-	ABC-F family ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	5.5e-48	27.6
WP_148505298.1|5330075_5331755_-	protein kinase	A0A0U2U263	Niemeyer_virus	1.6e-16	27.4
WP_082084263.1|5331996_5332965_-	SAM-dependent methyltransferase	NA	NA	NA	NA
WP_045672488.1|5333009_5333819_-	ATP-binding cassette domain-containing protein	A0A2H4UUX5	Bodo_saltans_virus	3.1e-10	25.1
WP_045672489.1|5333821_5334163_-	hypothetical protein	NA	NA	NA	NA
WP_045673659.1|5334159_5334996_-	deoxyribonuclease IV	A0A146JI69	Tokyovirus	3.7e-14	26.7

Sequences of DBSCAN-SWA_3

Nucleotide sequences of DBSCAN-SWA_3

>NZ_CP011058|5520994:5530603|DBSCAN-SWA
CTTAGCCTGCGCCCGCGCGAAGCAGCGCCATAACGACCGAGCGGAATGCTTCGCTCAGCGTTGCCGTGCCTTGCCTCCATTCGAAAGTTCCGCCGATCCGCCGCGACAACGCGGGTTTATCGGATCCCTTTGTTCGCTTGTCATCCGTTTCATACACCGGTACGGTGCCGATCTTCACACCGTTCAAATACCAGTCGATACGCCCGCGCTCCCCGAGCCTGTAAGCGGCGGTCGGCTGCGCCGAATCGAGCAGCACAAGCCTGGAGGAAACCGCGCCTTCCTCATCTTTCGCCAGCGGATACCGGAAGGTGCGTCCCGCCCGCAGCGAATATCCGGACACGCCCTGACCTTTCTCCGCCAGATTCGTCAGCGGATAATGATGGTAACCATAGTCTAGCAGCTTTTGGTGATCGGCCCAGTCGTCTCCGTCGTTGAGCGTTACCGCGGCGAGTCTTTGGCCGCCGCGAGTCGCCGAGCTGACGAGGCAGCGCAGCGCCGTTTTCGTATAACCGGTCTTAACGCCGTCCGCACCGTCATAGAAAGAAAGCATCTTATTTTTGTTTGTCCATTTGTAATCCCAGGCATCGTGAGGGTTTGGCGCCGTTTTCACCCGGGTGGCGACAATTTCGGAGAAAACGGAATTGTGCAGCGCATACGCGGTCAGCTTGGCCAAATCGACCGCAGAGGAGTAATGCCCATCCTGATCGAGACCGTGCGGATTCATAAAGCGGGTGTTTGCAAGGCCGAGCCATTCCGCCTTCTCGTTCATCAGACGGACAAAGCCTTCCTCCGATCCGCCGACATGCTCGGCAACGGCGGTCGCGGCGTCGTTGCCGGAGCGCAGCATCAAGCCGTAGAGCATATTGTGCAGCGTCATCTCTTCCCCAAGCTGCAAATAAATGGACGATCCCTCTTTGCCGACGGCCCGCTTGCCGACTTTGACGACATCCTGCAGCTTGCCCTCCTCAATCGCAACGATTGCCGTCATAATTTTCGTCAGGCTGGCAATCCTCATTTCTTCCGTGCCGTGGTCTTCATACAAAATGCGCCCCGATTCCACATCGATGAGGGCGGCAGCTTTCGCATGCGTCGTTATTGTTCCGGCCGATTGCGCCGGCTCAGCATTCGCCGAACCCTGTACTGCGGAATAGATCGTCATGCCTGCCAGCAGCAAAACTGCCAGCGGTTTTTTAAGCCGGGCCATTAGTGTGACTCCTCCTCATTGACAGCCGGTAAACCTGCGGCGTGCCGCAAGTTTACCGCTCGTCCTTCTCTAATTGTATGCCTCGTTGCTGCAGGTTATGAACAAGCTTTCTCAGCTCCGTTTTGAACGAATTGCGGAAGAAGAAAAAAACTGCCCGCTCGGGGCAGTTTCGTTAAACCAGTTGATCATTGTTGATACCCGATGTCGTGATCGGAGTAGTTATTGTCGTATTCATCGTGCCTGTGGCGTTGCTGCGGAACATGGTCTGAATTTTGTCCACCACTTGCGGCGCCGCATCGATTACCCGTTCCATCAAATGGGTTTGGTTATCAAGCGGTACGACTTTAACGCCTTGCACACCTACGACGAGAAAGGCAATCGGAGTAATCGACACCCCGCCGCCGCTGCCGCCGCCGAATGGAAGCGCAACGGCGGCATGGGCCGCATCGCTGCCGGCCTTCGCTTGGCTCCCGTTCATCTGGATATCGCTGCCGCCGGCCACGAAGCCGAAGCCCACTTTGCTGATCGGCATAATAACGCTGCCGTCCGGCGTCTGTACCGGATCGCCGACAATCGTGTTGACGTCGACCATCTGTTTGATGTTATCCATTGCCGTCTGCATCAAGCCTTGAATAGGATGTTCTGCCACAGCTTTACGCCACCTTTCGCTCTTTTCATGCGGAGAAGAAGTTGTAGTCCGGCAAGAATAGCATAACCGAAGCGGATTTGAGCTATGCAGGACCATTCGGTGGAAAAATGTGCTCGGCGGTAATCCGGCTCGACGGTAAGCAGCGGAGTCGAGGTGAGACGGACAAGCTGCGAAATGACGCCGATTGACGTTGTTTTGAGCGACCAGATCATGCCGGTAATCATCGCGGTCCACATGGCGTCGTCCACTCCAACCGATGTGTTCCATTTCCACTCCTTAAGGTTAACCCTTCGCAGCATTTGACGTATCCAGCCCGTCAAATCTTCCGTTCGCAGCAGCATTTTTTTCGAGTTTTCAATCATTTCGGTCATTTTCTGGACGTCGATTCGGTCCAGCAGCGACTCGTATCCTTCACCCCCGATATCCAGCTTGTCATTTTCTTGCCGAAAGTCGAACCCCGTTCCGGTAAACCGCAAGATCGGAATTCTCTTCTTTAAATAAATAAGGCCAAAGAGCGCCCGGACGCTAAACTCCATGTCGTCGTCGCTTCCCACCCTTCTAATCTCCCCCCTGATCCGAATGGGAGCGGTCATCAGAGCGGCTGCGAGCAGCAGCAAAACAACCAATGTGATGATCCAGCCGTAAAGATATCCAAGCAATCTTATTCCCCCGATTTCCTTATTTGGCTGAATATAGTATGGGGGCTGGAGCGAAAATTCATTCCTTTTTGCACCAAAAAGAAAAAACCTGCGGTTATTCCGCAGGTTCAAAGCCGGTCTCATCCGGCAGATCATCCCGATTCGATTGACGGCTTTCCAGCTTGTCAAACAGCAGTTGCGTCTGTTCGTCAAGCACGTCTTCCGGATCGACAACGGACGGTTCCGGCAGCGCCGCAAGCGAAGGCAGCTCGAAGTAATCCAGAAAGGCTTTCGTCGTCCCGTAAAGAATCGGCCGGCCGATTTGCTCGGCCCGGCCGACTTCTTCAATGAGGTCTTTGGCCGCGAGCGTCTGGATGGCGCGTTCGCTCTTGACGCCGCGGATTTCTTCGATCTCCACGCGCGTAATCGGCTGCCGGTAAGCGATGATCGAAAGTGTCTCCAGCGCCGCCTGGGACAGGCTGCTGCGCGTGGGAGAAACCGCCATCCGTTCGAAATACGGCGCATGGTCCGGATGGGTCGTCAGCCGGTAAGCGCCGGCGACCTCCGCAATGCGGATCCCCCGTCCGCCGCGTTCCATCTCTTCCTTCAAATCTTGCACCAGCTCGGAGCTGGTCGCTGCGTCAACTTCCATAATATCGGCAAGTTGTTTGGCGCTGAGACCTTCGTCCCCGGCCATAAACAGCAGTCCTTCAATAATCGATTTCAACTTCGGGTAATTCAAACTCACGTTCCGGCGAATCCCCTCTCCAATTGATGACGATATCTTCAAAGAGCCGGTGCTGGAATACCGTTACCTGTTTCATCTTCATCAGTTCCAGTATGGCGAGGAACGTTACGACAACCTCGTGGCGGTCCATATCCTGCCGGACCAGCTTCGAAAACCGGACGGTTTCATGTTCACGCAGTATATCGGCAATGTCCCGGATCCGGTCCTTGACCGATATTTCATCCCTGTGCACCGTTGCAACGGCGTTTCGCCGCGTAGCCTTGCGAAGCGCCTTTTGAAACGCGGCGATCAAGTCCGATAGCTGAAGCCCTTCGACCGGATTGACGGGGGACGCCTTCATAAACGTCGTCATATCTTCCGGCTCTTTGCTGTATACGAGACTGCGCGCCGTCTCCTTGCCCCGAAGCTGCTCCGCGATCTTCTTAAATTTCCGGTATTCGACCAGTTTCTGAATGAGTTCGTCCCGCGGATCGAGCGAATCGTCGTCGTGCCAGTCGTCGTATCCGTCATCTTCCAGAATCGGAGGCTTCGGGAGCAGCTGCTTGCTCTTCATCGCCAGCAGCGTCGCCGCCATGACGAGAAACTCGCTCGTCACGTCAAGCTCCAGCTGCTGCATGGCGTTTAAAAATTCCATATATTGGTCCGTAATATCACTGACGGATATTTCATGGATATCGATTTCGGCTCTATCGATCAAGTGCAGCAGCACATCCAGCGGCCCCTCGAAAGCTTCGAGTTTATAGTGCACGCTCAACGGGGTTCACTCAGCCTACGATCGCTTTGGTCAAGTTGGCCATTTCGATCGCCGAAGCGGCCGCTTCCCAGCCTTTATTGCCGGCTTTCGTTCCCGCGCGCTCAACCGCCTGCTCGATCGAATCGGTCGTCAGCACGCCGAAGATGGTAGGCACGCCGGTTTTCAGCGCGATTGCGGACACGCCTTTCGCCACCTCGTTGCACACGTAATCAAAGTGCGGCGTGGACCCGCGGATGACGGTTCCAAGCGTAATGACGGCGTCGTACTTGCCGCTCTCCGCCATTTTTTGGGCAATGAGCGGAATTTCGAAAGCGCCCGGCACCCATGCGACTTCAACTTCATCTTCTTCGGCGCCGTGACGTTTGAGCGCGTCCAGCGCTCCGCTCAGCAGCTTGCTCGTAATAAACTCGTTAAATCTGCCTACGACGATACCATACTTAAGACCTTGCGATACGAGATTTCCTTCAAATACTTTTGCCATAACGTTTCTCATCCTTTCATATCAGGCCGGGCAACCGCCCGCTCGGGGTCAAATTTCAAAATCGAGCAAATGGCCAAGTTTCGTTTTTTTGGTGTATAAATAGTTCGTGTTATCCTCGTTGCGCTCCACCTGCAGCGGCACCCGCTCGAATACATCAAGCCCGTACCCTTCAAGCCCTTTAATTTTGCGGGGGTTGTTGGTCAGCAGGCGCATGCGCCGCACGCCGAGATCTTTCAATATTTGCGCGCCGATGCCGTATTCCCGCAGATCGGGGGCGAATCCCAATTTAATATTCGCGTCGACCGTGTCGAATCCCTGCTCCTGAAGCGCGTAAGCTTTCAGTTTGTTAATGAGTCCGATTCCGCGGCCTTCCTGGCGCATATAAAGCAGCACGCCCCGGCCCTCCTGATCGATCTGGCGCAGAGCGGCCGCCAGCTGCGGCCCGCAGTCGCAGCGGTGCGAGTGAAACACGTCGCCGGTCATGCATTCGGAGTGGACGCGCACCAGTACCGGTTCGCCGCTATCCACATCGCCCTTCACAAGCGCGACATGCTCTTTGCCGTCAATTTCGTTCGTGTATGCGACGGCCCGGAATACGCCGAAATCGGTCGGCATGTTCACTTCCACGGCACGCTCCACGAGCTGCTCTTTGTTGCTGCGGTACAATATGAGGTCGCGGATCGTAATCAGCTTCAATTGATGCTTGCGCTTGAACTCAATGAGATCCGGCAGCCGGGCCATCGTGCCGTCTTCCTTAATGATTTCGCAGATCGCCGCTCCCTGCTTGGAGCCGCTCATGACGGCCAGATCGATCGCGGCCTCCGTATGGCCGGCGCGCCGCAGGACGCCGCCTTTTTTGGCAATGAGCGGAAAAATATGTCCCGGTCTGCGGAAGTCGTCCGCCTTGGCCGCGTCGTCCACAAGCGTCCGCACCGTCATCGCCCGTTCATGGGCGGAAATGCCGGTTGTCGTATCTATGTGGTCGACCGATACGGTGAACGCCGTGCCGTGATAGTCGGTGTTCCGGGATACCATCGGCGGCAGCTCGAGCGTCTCCGCCCGTTCGGCGGAAATCGGAACGCACACGAGGCCGCGCGCCTGCGTAATCATGAAATTGATGGTGTCCGCTGAAATGTTTTCCGCGAGCGCGATCAGATCGCCTTCGTTTTCACGGTCCTCGTCATCGACGACGATAATCGTTTTGCCTTGTTTCAAATCGAATAACGCGTCTTCTATCGTATCAAAAACATCATTCTGTTTCTCTGCGTCAATCATCGCTTACGTTCCCTACCTCTCTGCTAAAGTGCATCTATCCGGTATTTGCAAAAAATTTACATAAATCCGTTATCCGCCAAAAAAGCGGCGGAAAGGCTGTTTCCTCCCTTTCCGGCCGAGCCGCTCGGGACGGCGGATTCACCGCTGCGGCTGCCGTAATGGAGCAAATGATCGACATATTTGCCCAATATATCGCACTCGATATTGATCGTGTCGCCCGCTTTTTTATCCTGCAGCGCCGTTTCGCGCAGCGTGTGCGGAATGATCGATACGGCGAACGTTTCGTTATGAACATCGAATACGGTAAGGCTGATGCCGTCAATCGTCACCGATCCTTGCGGAATGATGTAACGCATCCGCTCCTCTTCGGACGGCTTTATCCGGTATACGACCGCGTTGGCGTCGGCTGTGCGGGATACGATGACGCCCGTCCCGTCCACATGCCCCTGCACGATATGGCCGCCGAAACGGCCGCCTGCGGCCATCGCCCGCTCCAGATTGACCCGCTGGCCGAGCTTCACTTCGCTCAAATTGGAATGGCGGTATGTTTGGGGCATGACGTCTACCGTAAAGGAAGCGCGGTCGAAGGAGACGACCGTAAGACAGACGCCGTTGACGGAAATGCTGTCTCCGTCTTGTACGCCTTCCAGCACTTTCGATGCCCCGATCGTCAGCAGCATCGCTTCCCCTTGGCGGCCGATCCGTTTCATAACGCCCGTTTCCTCAATTAATCCCGTAAACACAGCTAATGCCCCCTTATGTTAAACGATTGCCCAGCGGAATTCGCCGCCGGTTGGCCGGATAGCCGCTCAGGCAAATGTCGCTTCCGTAACGCTGTACATCCAGCTCTTCAATTTCAATCGCCTCGGACATTTTGTCAAACCCGTGCAGCTGGAAAGGGACCGGAGCGTTTGCTCCGCCAATCAGCTTTGGAGCGATAAATAGCAGCATTTTATCCACCAGGCCGGCATCGAGCATCGCCCCGCTAAGCGTGCCGCCGGCTTCGAGCAGCACCGAGCCGATCTCCAATTCGCCGAGCCGCTTCATCGCCTGAGTCAGGTCAACCTTCGGTCCCGCCCCGCATACGACGACCTTCACGCCTGCCGCCTCCAGCGCCTCTCTTTGGGACGCATCGGAGGATTCGGTCGTCACAATAACGGTCGGCGCCGCCTGGTCCTGCACCAGCTTCGCTCCGAGCGGCATCCGTAAGGCGGAGTCGACAACAATCCGCACGGGATGGATTCCGGGAACCGGGAGCCGGGTCGTAAGCGAAGGGTCGTCGGCAAGGACGGTGCCGATGCCGACCATAATGCCCATATGCCGGTGCCGCAGCATGTGGACCGCTTCGCGCGACGCCGGGGAGGTAACCCAGCGGCTGTCCCCCGTTTTCGCCGCGATTTTGCCGTCCAACGTAGAGGCGCTCTTGAGCGTCACAAACGGCAGGCCGGTTGTAATGAATTTATTGAAGGCTTCATTGAGCTTCATCGACCTTTCGCCGAGCACGCCCACTTTCACTTCGATGCCCGCCTCGCGCAGACGGGCAAGGCCGCGTCCCGCCACCAGCGGGTTTGGATCGGTGCAGGCAACGACTACTCGGGCTGCCTTGGCGGCTATTATCCGCTCGCAGCACGGAGGCGTCTTGCCGAAATGGCTGCACGGCTCGAGCGTCACGTAGACGGTCGCCCCTTCCGCTTCTTCACCCGCCATATTGAGCGCATGCACCTCGGCATGTCCGGTGCCCCTTTTCAAATGCGTGCCGACGCCGATGATGCGGCCATCCTTGACGACAACGCAGCCGACGACCGGATTGACCGACGTTTGACCGAGCGCCTTGGAAGCCAGGTTTAACGCAAGATCCATATAAAACTCGTCATTTAAAATATCCATAGCAAAAAACCCCCAAAGGCTTACTGGCCTCGGGGGTAAGAGAGTGTAGTAAAAGACATCTTCAAAGAAAGCATCCAAATGCCGACGTATAGCGTTCTGTATCATGCTCCCGCATAAACGCCCGCTTCAAACGATACTGGAACGGACGAAGCGAAGTATTATGCTCCCGTTAAAGAGAGAAAGGAACAGAATGCGAATCATCAGACGTTAACGGAAGGTTGTGAAAAAAAGCACGCAACCGTCACCAAATAGGCGATGCCAAAAAACTTTGAAGGCGTCTCCTTCTCCCATCCAGACTATACTGTCGGTCCCGGAATTGCACCGGATCCACCTTCGCCGCACGTTTTCTCTCATCGGTTGAGCATCGAAAACATTGCAGGTCCGGGTCACGGACTGACGGATAACGAACGCCCGGTTGGAACCGCACACGTCTGTTAGCCGATCACCGCCGGTTGGGAATTACACCCCACCCCGAAGGAAAGCCAAATGAATTTTATTACCAATAATAATTCGTGTTGACTGCATAGTACCACCATAGAAATAAAAAAGCAAGGATTTTCATCCCTGCTTACTTGCATATGTTGTTATGAACCGATTTCATTTCCTGTTGTCCCGCGGTACATATGGGAGTGGGGAAACCTTCCGTTCACGGTCGTAAATCCTTCAAAATAGTGATAGTGCCCTCCCCCGGGAAAGCTGACGGCCGGCCCTGTCGTTCCGCGTACAATGTGCGTATGACCGTCGTTCATCGACGTTACCGCATAATATTGATGTACGTGCTGAACGCCGCTTTCCGCAAGCTCCGTCGTACCGGCGTAATAATGGCTGTGTCCGTTGTTGAAGGACGTCATTCCTGAAAACGGATGCTCGTGAACCGGTCTGCCATCCCAAGATGTAATATACAGCTTATGAGAATGAAGCGGGTCAGAACCGTCCGAGTGAACGACAAAACCTGAAACAGGGATCTCCATTCCGATATTTCCTTCCCAATGATTTTGATATTCTATTGTATAGAGATACGGCGGGAGCGGTTTGGGCTGATTCCCAATAGACGCAGGAAATAATCGGAAGAATAATTCGTTCGAGAAAAGGAAAAAACAAGTCGGTAACCAATACTCCATAAAAAAGTGAGGGCACAGAATTGAAAAAAACAGGATCGCTTTTCATGATGATCACTTGCTTGGCGCTCGTGCTTTCGATCCCGGCTTTTGCAAACGGATCGGCCAATTCCGAAGTTGCTGCAAACTATGACACCACACGCATGGGCAACACCGTGAACAACAACGGCACGAACTGGGATAGAAACAATTACCGGGCAGCCGCTACCGACGATAATGATATTGACTGGGGCTGGCTTGGTCTGATCGGACTCGCCGGATTGGCGGGGTTAAGAAACAGGGACCGCGAACGTACCTGATGCGTCCGGAATGATGCCGGCATCAGGCAACCGGGCCGGCGATCGTTCATCCGCAATCCGAAAAAAAACGCCGGAATCTTGTGACAAGAATTCCGGCGTTTTTTTATTCTGTTCGACCGATAAGGTTAAGCGGTGTAAACTTCCACTTTCTCCATCTTGTCGCGGCCTTTAAAGGCGTCGACAAACTCCATCCCTTTCACCACTTTGCCGAATACGGTATGCTGACCGTCGAGATGCGGTTGCGGCTGGTAGCAAATATAAAATTGGCTGCCGCCGGTATTGCGTCCCGCATGGGCCATCGCCAGCGTTCCGCGCTCATGTTTGTTCGGGTTGATCTCGCAGTTGATCGTGTAGCCTGGGCCGCCGGCGCCGGTGCCGTCCGGACAGCCTCCTTGCGCGACAAAACCCGGGATGACGCGGTGGAAGTTAAGTCCGTTGTAGAAACCTTCGTTTGCCAGCTTCTCAAAGTTGGAGACCGTGTTCGGAGCGTCCTTTTCGAACAGATCCAAAATTACCTCTCCGCCGGTTGCCAATGTTATTTTCGCTTGTTTCGCCAT

Protein sequences of DBSCAN-SWA_3

>NZ_CP011058|5520994:5530603|5530171_5530603_-|WP_045672645.1|DBSCAN-SWA
MAKQAKITLATGGEVILDLFEKDAPNTVSNFEKLANEGFYNGLNFHRVIPGFVAQGGCPDGTGAGGPGYTINCEINPNKHERGTLAMAHAGRNTGGSQFYICYQPQPHLDGQHTVFGKVVKGMEFVDAFKGRDKMEKVEVYTA
>NZ_CP011058|5520994:5530603|5524996_5525467_-|WP_045672640.1|DBSCAN-SWA
MAKVFEGNLVSQGLKYGIVVGRFNEFITSKLLSGALDALKRHGAEEDEVEVAWVPGAFEIPLIAQKMAESGKYDAVITLGTVIRGSTPHFDYVCNEVAKGVSAIALKTGVPTIFGVLTTDSIEQAVERAGTKAGNKGWEAAASAIEMANLTKAIVG
>NZ_CP011058|5520994:5530603|5527498_5528629_-|WP_045672643.1|DBSCAN-SWA
MDILNDEFYMDLALNLASKALGQTSVNPVVGCVVVKDGRIIGVGTHLKRGTGHAEVHALNMAGEEAEGATVYVTLEPCSHFGKTPPCCERIIAAKAARVVVACTDPNPLVAGRGLARLREAGIEVKVGVLGERSMKLNEAFNKFITTGLPFVTLKSASTLDGKIAAKTGDSRWVTSPASREAVHMLRHRHMGIMVGIGTVLADDPSLTTRLPVPGIHPVRIVVDSALRMPLGAKLVQDQAAPTVIVTTESSDASQREALEAAGVKVVVCGAGPKVDLTQAMKRLGELEIGSVLLEAGGTLSGAMLDAGLVDKMLLFIAPKLIGGANAPVPFQLHGFDKMSEAIEIEELDVQRYGSDICLSGYPANRRRIPLGNRLT
>NZ_CP011058|5520994:5530603|5522369_5522846_-|WP_082084126.1|DBSCAN-SWA
MAEHPIQGLMQTAMDNIKQMVDVNTIVGDPVQTPDGSVIMPISKVGFGFVAGGSDIQMNGSQAKAGSDAAHAAVALPFGGGSGGGVSITPIAFLVVGVQGVKVVPLDNQTHLMERVIDAAPQVVDKIQTMFRSNATGTMNTTITTPITTSGINNDQLV
>NZ_CP011058|5520994:5530603|5524194_5524986_-|WP_045672639.1|DBSCAN-SWA
MSVHYKLEAFEGPLDVLLHLIDRAEIDIHEISVSDITDQYMEFLNAMQQLELDVTSEFLVMAATLLAMKSKQLLPKPPILEDDGYDDWHDDDSLDPRDELIQKLVEYRKFKKIAEQLRGKETARSLVYSKEPEDMTTFMKASPVNPVEGLQLSDLIAAFQKALRKATRRNAVATVHRDEISVKDRIRDIADILREHETVRFSKLVRQDMDRHEVVVTFLAILELMKMKQVTVFQHRLFEDIVINWRGDSPEREFELPEVEIDY
>NZ_CP011058|5520994:5530603|5529213_5529600_-|WP_045672644.1|DBSCAN-SWA
MEIPVSGFVVHSDGSDPLHSHKLYITSWDGRPVHEHPFSGMTSFNNGHSHYYAGTTELAESGVQHVHQYYAVTSMNDGHTHIVRGTTGPAVSFPGGGHYHYFEGFTTVNGRFPHSHMYRGTTGNEIGS
>NZ_CP011058|5520994:5530603|5523599_5524226_-|WP_045673690.1|DBSCAN-SWA
MNYPKLKSIIEGLLFMAGDEGLSAKQLADIMEVDAATSSELVQDLKEEMERGGRGIRIAEVAGAYRLTTHPDHAPYFERMAVSPTRSSLSQAALETLSIIAYRQPITRVEIEEIRGVKSERAIQTLAAKDLIEEVGRAEQIGRPILYGTTKAFLDYFELPSLAALPEPSVVDPEDVLDEQTQLLFDKLESRQSNRDDLPDETGFEPAE
>NZ_CP011058|5520994:5530603|5525515_5526742_-|WP_045672641.1|DBSCAN-SWA
MIDAEKQNDVFDTIEDALFDLKQGKTIIVVDDEDRENEGDLIALAENISADTINFMITQARGLVCVPISAERAETLELPPMVSRNTDYHGTAFTVSVDHIDTTTGISAHERAMTVRTLVDDAAKADDFRRPGHIFPLIAKKGGVLRRAGHTEAAIDLAVMSGSKQGAAICEIIKEDGTMARLPDLIEFKRKHQLKLITIRDLILYRSNKEQLVERAVEVNMPTDFGVFRAVAYTNEIDGKEHVALVKGDVDSGEPVLVRVHSECMTGDVFHSHRCDCGPQLAAALRQIDQEGRGVLLYMRQEGRGIGLINKLKAYALQEQGFDTVDANIKLGFAPDLREYGIGAQILKDLGVRRMRLLTNNPRKIKGLEGYGLDVFERVPLQVERNEDNTNYLYTKKTKLGHLLDFEI
>NZ_CP011058|5520994:5530603|5520994_5522197_-|WP_045672637.1|DBSCAN-SWA
MARLKKPLAVLLLAGMTIYSAVQGSANAEPAQSAGTITTHAKAAALIDVESGRILYEDHGTEEMRIASLTKIMTAIVAIEEGKLQDVVKVGKRAVGKEGSSIYLQLGEEMTLHNMLYGLMLRSGNDAATAVAEHVGGSEEGFVRLMNEKAEWLGLANTRFMNPHGLDQDGHYSSAVDLAKLTAYALHNSVFSEIVATRVKTAPNPHDAWDYKWTNKNKMLSFYDGADGVKTGYTKTALRCLVSSATRGGQRLAAVTLNDGDDWADHQKLLDYGYHHYPLTNLAEKGQGVSGYSLRAGRTFRYPLAKDEEGAVSSRLVLLDSAQPTAAYRLGERGRIDWYLNGVKIGTVPVYETDDKRTKGSDKPALSRRIGGTFEWRQGTATLSEAFRSVVMALLRAGAG
>NZ_CP011058|5520994:5530603|5529794_5530046_+|WP_045673691.1|DBSCAN-SWA
MMITCLALVLSIPAFANGSANSEVAANYDTTRMGNTVNNNGTNWDRNNYRAAATDDNDIDWGWLGLIGLAGLAGLRNRDRERT
>NZ_CP011058|5520994:5530603|5526798_5527485_-|WP_045672642.1|DBSCAN-SWA
MFTGLIEETGVMKRIGRQGEAMLLTIGASKVLEGVQDGDSISVNGVCLTVVSFDRASFTVDVMPQTYRHSNLSEVKLGQRVNLERAMAAGGRFGGHIVQGHVDGTGVIVSRTADANAVVYRIKPSEEERMRYIIPQGSVTIDGISLTVFDVHNETFAVSIIPHTLRETALQDKKAGDTINIECDILGKYVDHLLHYGSRSGESAVPSGSAGKGGNSLSAAFLADNGFM
>NZ_CP011058|5520994:5530603|5522818_5523505_-|WP_158453710.1|DBSCAN-SWA
MLGYLYGWIITLVVLLLLAAALMTAPIRIRGEIRRVGSDDDMEFSVRALFGLIYLKKRIPILRFTGTGFDFRQENDKLDIGGEGYESLLDRIDVQKMTEMIENSKKMLLRTEDLTGWIRQMLRRVNLKEWKWNTSVGVDDAMWTAMITGMIWSLKTTSIGVISQLVRLTSTPLLTVEPDYRRAHFSTEWSCIAQIRFGYAILAGLQLLLRMKRAKGGVKLWQNILFKA

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045672637.1|5520994_5522197_-	D-alanyl-D-alanine carboxypeptidase	A0A1P8VVG5	Erythrobacter_phage	2.5e-08	34.0
WP_082084126.1|5522369_5522846_-	sporulation protein YtfJ	NA	NA	NA	NA
WP_158453710.1|5522818_5523505_-	DUF2953 domain-containing protein	NA	NA	NA	NA
WP_045673690.1|5523599_5524226_-	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	8.0e-14	28.8
WP_045672639.1|5524194_5524986_-	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	2.9e-08	31.9
WP_045672640.1|5524996_5525467_-	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	5.6e-44	60.7
WP_045672641.1|5525515_5526742_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	3.8e-116	53.0
WP_045672642.1|5526798_5527485_-	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	9.0e-43	45.6
WP_045672643.1|5527498_5528629_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	5.1e-59	39.2
WP_045672644.1|5529213_5529600_-	hypothetical protein	NA	NA	NA	NA
WP_045673691.1|5529794_5530046_+	WGxxGxxG-CTERM domain-containing protein	NA	NA	NA	NA
WP_045672645.1|5530171_5530603_-	peptidylprolyl isomerase	A0A1B1IVS0	uncultured_Mediterranean_phage	3.2e-22	44.7