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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP011071 Muricauda lutaonensis strain CC-HSB-11 chromosome, complete genome 5 crisprs DEDDh,cas3,csa3 1 1 3 0

Results visualization

1. NZ_CP011071
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011071_1 211437-211630 Orphan NA
3 spacers
csa3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011071_2 532519-532650 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011071_3 671508-671624 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011071_4 1862304-1862404 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011071_5 2524183-2524275 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP011071_5 5.1|2524213|33|NZ_CP011071|CRISPRCasFinder 2524213-2524245 33 NZ_CP011071.1 872789-872821 0 1.0

1. spacer 5.1|2524213|33|NZ_CP011071|CRISPRCasFinder matches to position: 872789-872821, mismatch: 0, identity: 1.0

catgctgagcgtagccgaagtgagcctgcccgg	CRISPR spacer
catgctgagcgtagccgaagtgagcctgcccgg	Protospacer
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP011071_5 5.1|2524213|33|NZ_CP011071|CRISPRCasFinder 2524213-2524245 33 NC_019730 Oscillatoria nigro-viridis PCC 7112 plasmid pOSC7112.02, complete sequence 193058-193090 10 0.697

1. spacer 5.1|2524213|33|NZ_CP011071|CRISPRCasFinder matches to NC_019730 (Oscillatoria nigro-viridis PCC 7112 plasmid pOSC7112.02, complete sequence) position: , mismatch: 10, identity: 0.697

catgctgagcgtagccgaagtgagcctgcccgg	CRISPR spacer
tgtgctgagcgtagtcgaagtgaaccggagtcc	Protospacer
..************.********.** *  .  

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 152943 : 204725 50 Acidithiobacillus_phage(27.27%) protease,transposase NA
DBSCAN-SWA_2 677381 : 686361 8 Staphylococcus_phage(33.33%) tRNA NA
DBSCAN-SWA_3 2520175 : 2591036 59 Acidithiobacillus_phage(27.27%) tRNA,integrase,transposase attL 2531862:2531893|attR 2575325:2575356
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage