CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_HG004426	Campylobacter fetus subsp. venerealis str. 84-112	1 crisprs	cas4,cas14j,DEDDh,cas3,cas6,csx23,cas10,csm3gr7,csx10gr5,csx19,c2c9_V-U4	2	4	1	0
NZ_HG004427	Campylobacter fetus subsp. venerealis str. 84-112	0 crisprs	cas14j	0	0	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_HG004426_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_HG004426_1

684618-686228

Orphan

Consensus_repeat	Method
GTTTGCTAATGACAATGTTTGTGTTGAAAC	PILER-CR
GTTTGCTAATGACAATGTTTGTGTTGAAAC	CRISPRCasFinder
GTTTGCTAATGACAATGTTTGTGTTGAAAC	CRT

24 spacers

The CRISPR arrays of NZ_HG004426_1

>merge|NZ_HG004426|1|684618-686228|PILER-CR,CRISPRCasFinder,CRT
GTTTGCTAATGACAATGTTTGTGTTGAAACCCGTAAGCTACATTGTAAGCTAAGTCTTCAAAGACTGTTTGCTAATGACAATGTTTGTGTTGAAACTATAAAGGGACCTACGAACTAAGCTAGAACCCTTTTGTTTGCTAATGACAATGTTTGTGTTGAAACGTGTAAGCAAGATGGCAAGAGACTATCTCCTGTTGTGTTTGCTAATGACAATGTTTGTGTTGAAACCGGGGAGCAACGTTAGCAATCTCATTTCCGTCCATGTTTGCTAATGACAATGTTTGTGTTGAAACTGGGGATTCGATGAAATTTTTAACTATATAGCATTCGTTTGCTAATGACAATGTTTGTGTTGAAACTTTTTATAAGGCTCATTTTTGAAGATATTATGCTGCGTTTGCTAATGACAATGTTTGTGTTGAAACCGGGGAGCAACGTTAGCAATCTCATTTCCGTCCATGTTTGCTAATGACAATGTTTGTGTTGAAACTGGGGATTCGATGAAATTTTTAACTATATAGCATTCGTTTGCTAATGACAATGTTTGTGTTGAAACTTTTTATAAGGCTCATTTTTGAAGATATTATGCTGCGTTTGCTAATGACAATGTTTGTGTTGAAACTCCAGAGCTAATAAGGGATTTAGAGCAGCTAAAAACTGTTTGCTAATGACAATGTTTGTGTTGAAACCGCAAAAAGAGTTGAAATATATAGATAATAGGTTAAGTTTGCTAATGACAATGTTTGTGTTGAAACAATCCAACTTAACAAAAATGTTATATAAAATCACCGTTTGCTAATGACAATGTTTGTGTTGAAACTAAACTATTTCGTTATCCTGGTTGATACCGCTTAAAGTTTGCTAATGACAATGTTTGTGTTGAAACATGAGTTTAAATTTGATAGATCTGAAAAGATTATTCGTTTGCTAATGACAATGTTTGTGTTGAAACCTTGATACTTTTTGCTTGATTAGCTTTGCATTTTTAGTTTGCTAATGACAATGTTTGTGTTGAAACTTTGAAGTGCACGACGCTATAACTAGAACACGGATCGTTTGCTAATGACAATGTTTGTGTTGAAACATTAAAGCCGAATTACTCCCATTTTTTTTGACTTGGGTTTGCTAATGACAATGTTTGTGTTGAAACTGTATGTTGGTAGCTTTTATGGTTACTTTACATAACGTTTGCTAATGACAATGTTTGTGTTGAAACTCACCAAAAAAACCAGGAATTAAATAAAAAGTAAAAGTTTGCTAATGACAATGTTTGTGTTGAAACAATCCAACTTAACAAAAATGTTATATAAAATCACCGTTTGCTAATGACAATGTTTGTGTTGAAACTAAGCAAGGCTTATAAGCTCTTTACAATGCATTTTTGTTTGCTAATGACAATGTTTGTGTTGAAACAGAACTGTTTTAACCTCACTTCCATCAATCTCTTTTGTTTGCTAATGACAATGTTTGTGTTTAAACCAGTATGCCATTTGATTCTAGTTCGCCTATAGCTCTGTTTGCTAATGACAATGTTTGTGTTGAAACCATCCTCCTTTTAATTTATTACATTTAAACAATTTAGTTTGCTAATGACAATGTTTGTGTTGAAAC

>NZ_HG004426|1|1|684618-686228|PILER-CR
GTTTGCTAATGACAATGTTTGTGTTGAAAC	CCGTAAGCTACATTGTAAGCTAAGTCTTCAAAGACT
GTTTGCTAATGACAATGTTTGTGTTGAAAC	TATAAAGGGACCTACGAACTAAGCTAGAACCCTTTT
GTTTGCTAATGACAATGTTTGTGTTGAAAC	GTGTAAGCAAGATGGCAAGAGACTATCTCCTGTTGT
GTTTGCTAATGACAATGTTTGTGTTGAAAC	CGGGGAGCAACGTTAGCAATCTCATTTCCGTCCAT
GTTTGCTAATGACAATGTTTGTGTTGAAAC	TGGGGATTCGATGAAATTTTTAACTATATAGCATTC
GTTTGCTAATGACAATGTTTGTGTTGAAAC	TTTTTATAAGGCTCATTTTTGAAGATATTATGCTGC
GTTTGCTAATGACAATGTTTGTGTTGAAAC	CGGGGAGCAACGTTAGCAATCTCATTTCCGTCCAT
GTTTGCTAATGACAATGTTTGTGTTGAAAC	TGGGGATTCGATGAAATTTTTAACTATATAGCATTC
GTTTGCTAATGACAATGTTTGTGTTGAAAC	TTTTTATAAGGCTCATTTTTGAAGATATTATGCTGC
GTTTGCTAATGACAATGTTTGTGTTGAAAC	TCCAGAGCTAATAAGGGATTTAGAGCAGCTAAAAACT
GTTTGCTAATGACAATGTTTGTGTTGAAAC	CGCAAAAAGAGTTGAAATATATAGATAATAGGTTAA
GTTTGCTAATGACAATGTTTGTGTTGAAAC	AATCCAACTTAACAAAAATGTTATATAAAATCACC
GTTTGCTAATGACAATGTTTGTGTTGAAAC	TAAACTATTTCGTTATCCTGGTTGATACCGCTTAAA
GTTTGCTAATGACAATGTTTGTGTTGAAAC	ATGAGTTTAAATTTGATAGATCTGAAAAGATTATTC
GTTTGCTAATGACAATGTTTGTGTTGAAAC	CTTGATACTTTTTGCTTGATTAGCTTTGCATTTTTA
GTTTGCTAATGACAATGTTTGTGTTGAAAC	TTTGAAGTGCACGACGCTATAACTAGAACACGGATC
GTTTGCTAATGACAATGTTTGTGTTGAAAC	ATTAAAGCCGAATTACTCCCATTTTTTTTGACTTGG
GTTTGCTAATGACAATGTTTGTGTTGAAAC	TGTATGTTGGTAGCTTTTATGGTTACTTTACATAAC
GTTTGCTAATGACAATGTTTGTGTTGAAAC	TCACCAAAAAAACCAGGAATTAAATAAAAAGTAAAA
GTTTGCTAATGACAATGTTTGTGTTGAAAC	AATCCAACTTAACAAAAATGTTATATAAAATCACC
GTTTGCTAATGACAATGTTTGTGTTGAAAC	TAAGCAAGGCTTATAAGCTCTTTACAATGCATTTTT
GTTTGCTAATGACAATGTTTGTGTTGAAAC	AGAACTGTTTTAACCTCACTTCCATCAATCTCTTTT
GTTTGCTAATGACAATGTTTGTGTTTAAAC	CAGTATGCCATTTGATTCTAGTTCGCCTATAGCTCT
GTTTGCTAATGACAATGTTTGTGTTGAAAC	CATCCTCCTTTTAATTTATTACATTTAAACAATTTA
GTTTGCTAATGACAATGTTTGTGTTGAAAC

>NZ_HG004426|1|1|684618-686228|CRISPRCasFinder
GTTTGCTAATGACAATGTTTGTGTTGAAAC	CCGTAAGCTACATTGTAAGCTAAGTCTTCAAAGACT
GTTTGCTAATGACAATGTTTGTGTTGAAAC	TATAAAGGGACCTACGAACTAAGCTAGAACCCTTTT
GTTTGCTAATGACAATGTTTGTGTTGAAAC	GTGTAAGCAAGATGGCAAGAGACTATCTCCTGTTGT
GTTTGCTAATGACAATGTTTGTGTTGAAAC	CGGGGAGCAACGTTAGCAATCTCATTTCCGTCCAT
GTTTGCTAATGACAATGTTTGTGTTGAAAC	TGGGGATTCGATGAAATTTTTAACTATATAGCATTC
GTTTGCTAATGACAATGTTTGTGTTGAAAC	TTTTTATAAGGCTCATTTTTGAAGATATTATGCTGC
GTTTGCTAATGACAATGTTTGTGTTGAAAC	CGGGGAGCAACGTTAGCAATCTCATTTCCGTCCAT
GTTTGCTAATGACAATGTTTGTGTTGAAAC	TGGGGATTCGATGAAATTTTTAACTATATAGCATTC
GTTTGCTAATGACAATGTTTGTGTTGAAAC	TTTTTATAAGGCTCATTTTTGAAGATATTATGCTGC
GTTTGCTAATGACAATGTTTGTGTTGAAAC	TCCAGAGCTAATAAGGGATTTAGAGCAGCTAAAAACT
GTTTGCTAATGACAATGTTTGTGTTGAAAC	CGCAAAAAGAGTTGAAATATATAGATAATAGGTTAA
GTTTGCTAATGACAATGTTTGTGTTGAAAC	AATCCAACTTAACAAAAATGTTATATAAAATCACC
GTTTGCTAATGACAATGTTTGTGTTGAAAC	TAAACTATTTCGTTATCCTGGTTGATACCGCTTAAA
GTTTGCTAATGACAATGTTTGTGTTGAAAC	ATGAGTTTAAATTTGATAGATCTGAAAAGATTATTC
GTTTGCTAATGACAATGTTTGTGTTGAAAC	CTTGATACTTTTTGCTTGATTAGCTTTGCATTTTTA
GTTTGCTAATGACAATGTTTGTGTTGAAAC	TTTGAAGTGCACGACGCTATAACTAGAACACGGATC
GTTTGCTAATGACAATGTTTGTGTTGAAAC	ATTAAAGCCGAATTACTCCCATTTTTTTTGACTTGG
GTTTGCTAATGACAATGTTTGTGTTGAAAC	TGTATGTTGGTAGCTTTTATGGTTACTTTACATAAC
GTTTGCTAATGACAATGTTTGTGTTGAAAC	TCACCAAAAAAACCAGGAATTAAATAAAAAGTAAAA
GTTTGCTAATGACAATGTTTGTGTTGAAAC	AATCCAACTTAACAAAAATGTTATATAAAATCACC
GTTTGCTAATGACAATGTTTGTGTTGAAAC	TAAGCAAGGCTTATAAGCTCTTTACAATGCATTTTT
GTTTGCTAATGACAATGTTTGTGTTGAAAC	AGAACTGTTTTAACCTCACTTCCATCAATCTCTTTT
GTTTGCTAATGACAATGTTTGTGTTTAAAC	CAGTATGCCATTTGATTCTAGTTCGCCTATAGCTCT
GTTTGCTAATGACAATGTTTGTGTTGAAAC	CATCCTCCTTTTAATTTATTACATTTAAACAATTTA
GTTTGCTAATGACAATGTTTGTGTTGAAAC

>NZ_HG004426|1|1|684618-686228|CRT
GTTTGCTAATGACAATGTTTGTGTTGAAAC	CCGTAAGCTACATTGTAAGCTAAGTCTTCAAAGACT
GTTTGCTAATGACAATGTTTGTGTTGAAAC	TATAAAGGGACCTACGAACTAAGCTAGAACCCTTTT
GTTTGCTAATGACAATGTTTGTGTTGAAAC	GTGTAAGCAAGATGGCAAGAGACTATCTCCTGTTGT
GTTTGCTAATGACAATGTTTGTGTTGAAAC	CGGGGAGCAACGTTAGCAATCTCATTTCCGTCCAT
GTTTGCTAATGACAATGTTTGTGTTGAAAC	TGGGGATTCGATGAAATTTTTAACTATATAGCATTC
GTTTGCTAATGACAATGTTTGTGTTGAAAC	TTTTTATAAGGCTCATTTTTGAAGATATTATGCTGC
GTTTGCTAATGACAATGTTTGTGTTGAAAC	CGGGGAGCAACGTTAGCAATCTCATTTCCGTCCAT
GTTTGCTAATGACAATGTTTGTGTTGAAAC	TGGGGATTCGATGAAATTTTTAACTATATAGCATTC
GTTTGCTAATGACAATGTTTGTGTTGAAAC	TTTTTATAAGGCTCATTTTTGAAGATATTATGCTGC
GTTTGCTAATGACAATGTTTGTGTTGAAAC	TCCAGAGCTAATAAGGGATTTAGAGCAGCTAAAAACT
GTTTGCTAATGACAATGTTTGTGTTGAAAC	CGCAAAAAGAGTTGAAATATATAGATAATAGGTTAA
GTTTGCTAATGACAATGTTTGTGTTGAAAC	AATCCAACTTAACAAAAATGTTATATAAAATCACC
GTTTGCTAATGACAATGTTTGTGTTGAAAC	TAAACTATTTCGTTATCCTGGTTGATACCGCTTAAA
GTTTGCTAATGACAATGTTTGTGTTGAAAC	ATGAGTTTAAATTTGATAGATCTGAAAAGATTATTC
GTTTGCTAATGACAATGTTTGTGTTGAAAC	CTTGATACTTTTTGCTTGATTAGCTTTGCATTTTTA
GTTTGCTAATGACAATGTTTGTGTTGAAAC	TTTGAAGTGCACGACGCTATAACTAGAACACGGATC
GTTTGCTAATGACAATGTTTGTGTTGAAAC	ATTAAAGCCGAATTACTCCCATTTTTTTTGACTTGG
GTTTGCTAATGACAATGTTTGTGTTGAAAC	TGTATGTTGGTAGCTTTTATGGTTACTTTACATAAC
GTTTGCTAATGACAATGTTTGTGTTGAAAC	TCACCAAAAAAACCAGGAATTAAATAAAAAGTAAAA
GTTTGCTAATGACAATGTTTGTGTTGAAAC	AATCCAACTTAACAAAAATGTTATATAAAATCACC
GTTTGCTAATGACAATGTTTGTGTTGAAAC	TAAGCAAGGCTTATAAGCTCTTTACAATGCATTTTT
GTTTGCTAATGACAATGTTTGTGTTGAAAC	AGAACTGTTTTAACCTCACTTCCATCAATCTCTTTT
GTTTGCTAATGACAATGTTTGTGTTTAAAC	CAGTATGCCATTTGATTCTAGTTCGCCTATAGCTCT
GTTTGCTAATGACAATGTTTGTGTTGAAAC	CATCCTCCTTTTAATTTATTACATTTAAACAATTTA
GTTTGCTAATGACAATGTTTGTGTTGAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_HG004426.1\|WP_002849076.1\|690288_690525_+\|hypothetical-protein	unknown	unknown	unknown
NZ_HG004426.1\|WP_002849044.1\|676836_677790_+\|NAD(P)-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|379355
NZ_HG004426.1\|WP_002849046.1\|680407_680779_+\|YkgJ-family-cysteine-cluster-protein	unknown	unknown	gnl\|CDD\|223799
NZ_HG004426.1\|WP_010403934.1\|679718_680414_+\|methyltransferase	unknown	unknown	gnl\|CDD\|226608
NZ_HG004426.1\|WP_046037358.1\|693981_695463_+\|inorganic-phosphate-transporter	unknown	unknown	gnl\|CDD\|223383
NZ_HG004426.1\|WP_002849081.1\|692923_693847_+\|4-hydroxythreonine-4-phosphate-dehydrogenase	unknown	unknown	gnl\|CDD\|179681
NZ_HG004426.1\|WP_011731910.1\|691284_692109_+\|adenylosuccinate-lyase	unknown	unknown	gnl\|CDD\|236352
NZ_HG004426.1\|WP_024305373.1\|680754_682050_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274350
NZ_HG004426.1\|WP_011731891.1\|683325_684063_+\|YaaA-family-protein	unknown	unknown	gnl\|CDD\|377151
NZ_HG004426.1\|WP_002849060.1\|687339_687546_+\|hypothetical-protein	unknown	unknown	unknown
NZ_HG004426.1\|WP_002849052.1\|682822_683329_+\|HIT-domain-containing-protein	unknown	unknown	gnl\|CDD\|238606
NZ_HG004426.1\|WP_002849077.1\|690511_691228_+\|arginyltransferase	unknown	unknown	gnl\|CDD\|234939
NZ_HG004426.1\|WP_002849039.1\|674029_675373_+\|3-deoxy-7-phosphoheptulonate-synthase-class-II	unknown	unknown	gnl\|CDD\|366662
NZ_HG004426.1\|WP_025370330.1\|686238_687006_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|213641
NZ_HG004426.1\|WP_011731911.1\|692153_692927_+\|pyridoxine-5'-phosphate-synthase	unknown	unknown	gnl\|CDD\|235380
NZ_HG004426.1\|WP_002849067.1\|686981_687299_+\|hypothetical-protein	unknown	unknown	unknown
NZ_HG004426.1\|WP_002849074.1\|688836_690282_+\|acetyl-CoA-carboxylase-subunit-A	unknown	unknown	gnl\|CDD\|169452
NZ_HG004426.1\|WP_002849050.1\|682046_682823_+\|indole-3-glycerol-phosphate-synthase-TrpC	unknown	unknown	gnl\|CDD\|234710
NZ_HG004426.1\|WP_024305374.1\|677799_679722_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274008
NZ_HG004426.1\|WP_002849042.1\|675534_676758_-\|glutamate-5-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|143398

Protein	Function_ID	Function_description	E-value
NZ_HG004426.1\|WP_002849044.1\|676836_677790_+\|NAD(P)-binding-domain-containing-protein	gnl\|CDD\|379355	pfam13738, Pyr_redox_3, Pyridine nucleotide-disulphide oxidoreductase.	1.83609e-57
NZ_HG004426.1\|WP_002849046.1\|680407_680779_+\|YkgJ-family-cysteine-cluster-protein	gnl\|CDD\|223799	COG0727, COG0727, Predicted Fe-S-cluster oxidoreductase [General function prediction only].	1.65843e-13
NZ_HG004426.1\|WP_010403934.1\|679718_680414_+\|methyltransferase	gnl\|CDD\|226608	COG4123, COG4123, Predicted O-methyltransferase [General function prediction only].	5.72991e-53
NZ_HG004426.1\|WP_002849081.1\|692923_693847_+\|4-hydroxythreonine-4-phosphate-dehydrogenase	gnl\|CDD\|179681	PRK03946, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Provisional.	0
NZ_HG004426.1\|WP_011731910.1\|691284_692109_+\|adenylosuccinate-lyase	gnl\|CDD\|236352	PRK08937, PRK08937, adenylosuccinate lyase; Provisional.	2.29446e-18
NZ_HG004426.1\|WP_024305373.1\|680754_682050_+\|hypothetical-protein	gnl\|CDD\|274350	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein. This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.	9.35572e-08
NZ_HG004426.1\|WP_011731891.1\|683325_684063_+\|YaaA-family-protein	gnl\|CDD\|377151	pfam03883, H2O2_YaaD, Peroxide stress protein YaaA. YaaA is a key element of the stress response to H2O2. It acts by reducing the level of intracellular iron levels after peroxide stress, thereby attenuating the Fenton reaction and the DNA damage that this would cause. The molecular mechanism of action is not known.	3.02596e-45
NZ_HG004426.1\|WP_002849052.1\|682822_683329_+\|HIT-domain-containing-protein	gnl\|CDD\|238606	cd01275, FHIT, FHIT (fragile histidine family): FHIT proteins, related to the HIT family carry a motif HxHxH/Qxx (x, is a hydrophobic amino acid), On the basis of sequence, substrate specificity, structure, evolution and mechanism, HIT proteins are classified into three branches: the Hint branch, which consists of adenosine 5' -monophosphoramide hydrolases, the Fhit branch, that consists of diadenosine polyphosphate hydrolases, and the GalT branch consisting of specific nucloside monophosphate transferases. Fhit plays a very important role in the development of tumours. Infact, Fhit deletions are among the earliest and most frequent genetic alterations in the development of tumours.	3.923e-47
NZ_HG004426.1\|WP_002849077.1\|690511_691228_+\|arginyltransferase	gnl\|CDD\|234939	PRK01305, PRK01305, arginyl-tRNA-protein transferase; Provisional.	7.00248e-89
NZ_HG004426.1\|WP_002849039.1\|674029_675373_+\|3-deoxy-7-phosphoheptulonate-synthase-class-II	gnl\|CDD\|366662	pfam01474, DAHP_synth_2, Class-II DAHP synthetase family. Members of this family are aldolase enzymes that catalyze the first step of the shikimate pathway.	0
NZ_HG004426.1\|WP_025370330.1\|686238_687006_+\|hypothetical-protein	gnl\|CDD\|213641	TIGR01641, Uncharacterized_protein_MJ0329, phage putative head morphogenesis protein, SPP1 gp7 family. This model describes a region of about 110 amino acids found exclusively in phage-related proteins, internally or toward the C-terminus. One member, gp7 of phage SPP1, appears involved in head morphogenesis. [Mobile and extrachromosomal element functions, Prophage functions].	0.000442902
NZ_HG004426.1\|WP_011731911.1\|692153_692927_+\|pyridoxine-5'-phosphate-synthase	gnl\|CDD\|235380	PRK05265, PRK05265, pyridoxine 5'-phosphate synthase; Provisional.	9.13382e-114
NZ_HG004426.1\|WP_046037358.1\|693981_695463_+\|inorganic-phosphate-transporter	gnl\|CDD\|223383	COG0306, PitA, Phosphate/sulphate permeases [Inorganic ion transport and metabolism].	1.16118e-49
NZ_HG004426.1\|WP_002849074.1\|688836_690282_+\|acetyl-CoA-carboxylase-subunit-A	gnl\|CDD\|169452	PRK08463, PRK08463, acetyl-CoA carboxylase subunit A; Validated.	0
NZ_HG004426.1\|WP_002849050.1\|682046_682823_+\|indole-3-glycerol-phosphate-synthase-TrpC	gnl\|CDD\|234710	PRK00278, trpC, indole-3-glycerol phosphate synthase TrpC.	6.08927e-122
NZ_HG004426.1\|WP_024305374.1\|677799_679722_+\|hypothetical-protein	gnl\|CDD\|274008	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins].	9.18393e-08
NZ_HG004426.1\|WP_002849042.1\|675534_676758_-\|glutamate-5-semialdehyde-dehydrogenase	gnl\|CDD\|143398	cd07079, ALDH_F18-19_ProA-GPR, Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19. Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1).	0

>NZ_HG004426.1|WP_011731891.1|683325_684063_+|YaaA-family-protein
MKILFSPSESKMSGGSRDASVNFSWVFPNLNDKRLEILEMYNSFLKKANKNELQALFGLKKDNELEYYSSDLFSRPLMKAILRYNGVAYEHLNYRNLDERSRKMIDENTIIFSNLYGVILAKDMIFDYKLKQGESIGGFRTEVFYKKYFSGVLDDFLDSDILDLRAGFYEKFYSLTKPYTTIKFLKNGKVVSHFAKAYRGIVLRCIALNQISSLDEFYNMQIPNLKINKIIKNRLKTEIVVDIIG
>NZ_HG004426.1|WP_002849052.1|682822_683329_+|HIT-domain-containing-protein
MEHEFSPWRAEYFKTRKDDGVTDHSCVFCDIAENIQNDEENFVLFRAKNCFAVMNRYPYTLGEFMIIPYIHTDNIENLDKNIWSEMSDLVQLGVGVLKESLNANGVNIGMNLGSAAGAGIAEHIHYHLVPRWSRDTNFITTIAYTRVHGVPFLDQYHTLKKAFQKIFK
>NZ_HG004426.1|WP_002849050.1|682046_682823_+|indole-3-glycerol-phosphate-synthase-TrpC
MILDEIISKTKINLENIKENLPLCRLENALTNSYIPRDVKQVLKQKNSINIIAEIKKASPSKGVIKEDFDPLKIAFEYEKAGVSAFSILTEPFYFQGSLEYIALVRRYTNTPILRKDFIVDIYQIAEARLYGADFILLIAKALDKFYLKTLFEYAKSLNLEVLMEIHDETDLEKALFVDADIIGINHRNLQTFDMDMELCIKLIPLIPSGKIIVAESGLYNNSELINLKKQGADAFLIGEHFMRQESIYNAVKDMKGE
>NZ_HG004426.1|WP_024305373.1|680754_682050_+|hypothetical-protein
MYWCRAALIFTLFLAGCADKQSVGAKKNETFFKYSDINTTIDLEAMKGFYLLGDAKSKDALEVFYMLYKTTKKPIFLKEALKIAFVIKDDRLDELITDAREILNADYDVIRIEIGYYILKSQIKDAKDLALNLIQKESDNSINHSILATIYLFNDEPIRALKEFKKAYEIEGSEENLLKLVDMLDNKLDRTNEAIRYLNNWIGENGCSKPVCFTLLNIYSAKGELDLMIEVYIKLYEAYEESDFLNRALEILLYKKDVISAKELLEKYSFNEPILMEIYAELKEFQKAYNVAQDLYNRSQNPEYMARMAIYKYEQSSKNISKFELDMVVKLFEGSVYALNSPIYFNYYGYLLIDYEIDLKKGLDIAKKAYILDPNSPYIIDSIAWGYFKLGECKEAKMWMDKIQSDTKFMKEDEAKAHKTAIDKCFNKGTK
>NZ_HG004426.1|WP_002849046.1|680407_680779_+|YkgJ-family-cysteine-cluster-protein
MLKEFGFDYCFDSSKCEVCGAKCCTGDSGYIWISEAEMESLSSHLKLSLPEFKKLFTYRVGVRFSLKEKEYNGAYACLFFDENNKNCSVYEFRPKQCRTFPFWDYFKKHFNELEKECIGVERL
>NZ_HG004426.1|WP_010403934.1|679718_680414_+|methyltransferase
MKLFQLKEGYRYNSDTLFLYDFISKNQIFGNVLDVGCGCGILGLLLKRDFINLNLSSIDIQEINSTITQLNADVNNLVAAVICDDFSKFKSEIKFDFIVSNPPFYNSQITKSENEHISISRYSSSLDPLSFFKSVNANLKPQGVLYFCYDARRVGEILPILSSLKLKLTKLRFVHSRISESSKLALFEAKKSSKSICGIYPPLIIFDENEFSGEVKEIFKKSDTKSEIYEC
>NZ_HG004426.1|WP_024305374.1|677799_679722_+|hypothetical-protein
MKFRKFAQILFLVGTIFFILGCETKDEKALNQDKLKFSDLSMAEQDRYISKDELDKLGSYLTLLNNRNIDINSDEIPSGSVDELRDKIAELIQKNRLLFADNEELAKKNLEIITKLREQNSLRESENKLISAKYLDSMNEVEKQHYKNINDLTKKINEVQKENIQSIKSYEQKIIGLENKIDELEKELSKKDINFNEKVSSATKDQLEKNKELSQKNSYLLEQTQVLKKQVDTLSKELDSKLADKKTQIDTLNQTILTKDNKINDLLASHTNEIIELQNKHSKALYDIKNELDRQKNDYFGELNLKNSELAKLNNDFKEYKLKKDEELKNAENRVLINYKKIETQRLNAIKSDYERIIFEQNRTIAAFEGKMINLELKFKKDLEAKDANYVNTLENLKQKALFLKNDEDRLRAEFDKNITSLKSQITLKNIQISELDSKIKELENEKNDIKKIQNYEILNNMITKLNAQNEELKNYAKKALDEAKKMVLEAENKAKEQNDKLKNYYEELIKNIKNQDNQPVLSDINVDSKRFLSEISCLSLDKSAKLDKDCENKLNDMIKKYGKSRIYEIKAVISDFKFLGDDKVGELKNVNLLNLKSTKDMLNAASKAINSKIKDPMLAYSKDVLLEQSGYGFVIKVYE
>NZ_HG004426.1|WP_002849044.1|676836_677790_+|NAD(P)-binding-domain-containing-protein
MENIYDVVVIGGGPFGIATVVEAKYNGFKNVLLLEKGDNHSQTIRKFYKDGKRVDKVYKGLDSQTHGNVEFFDGTKESTLNYFDNLLDNGKIDAVFNIEVESVKKDGDIFNIVTSKNTYKSKNVMIGIGRMGKPNKPEYKIPPSLTQIVNFNLNSCNCGENILVIGGGNSAAEYAIELSKCNTVTLCYRKEKFTRLNEINEAQVFEYFNDKKLNLKLGIDVIGLDNENGKVKVNFSNNSSEIYDRIIYAIGGSTPVDFLQKCGIELNKDGEPIVDEHLQTNTPRLFVGGDIASKNGGSIVVALNDAHTVIDYIIKSK
>NZ_HG004426.1|WP_002849042.1|675534_676758_-|glutamate-5-semialdehyde-dehydrogenase
MEKLLNNLKNSSKSLSILTQTQRENLIINIANEIMSAKDEILSANKIDLDLAQDLSSALKDRLKLTSKSIENLCNSIKNIANLKDVIGVIKDGWQTKSGLKIEKITIPLGNIATIYESRPNVTAEVAALCIKSANGCALKGGKEAKNTNLAIIKAIHKALQKCGLDKNCVVYLDIDRNEVKKLINMDKYLDLIVPRGGENLVKFVSQNATIPVLKHDKGLCHIYVDEFADLDKALSICVNAKCSRPGVCNAAETILVHEEVANEFIPNLKKSLDEFNVIIFGCKKTAKIIDCELANEQNYSTEYLDFKLNLKIVKNLEESLEHISEFSSGHSEAVISESYSICERFLSLVDSACVYANASTRFSDGGEFGFGAEIGISTNKLHARGPVGLNELTTYKYIIRANGQIR
>NZ_HG004426.1|WP_002849039.1|674029_675373_+|3-deoxy-7-phosphoheptulonate-synthase-class-II
MSKWNRDSWRDYNILQQPHYPDKNELKNAEDKLKSLPPLVFAGEVRNLKDELKNVTLGKSFLLQGGDCAESFSNFSANGIRDMFKIMLQMAIVLTFAGGCPVVKVGRVAGQFAKPRSSDFEDIDGVKLPSYRGDIINGFDFTEEARIPDPKRMIDAYYQSASTLNLLRAFSRGGLANLNEVHRWNLGFIKKAELDNKFEKLADELTGALKFMEACGVTTQNTPTLSETKLYTSHEALLLPYEEALTRVDSLTNEWYDCSAHMLWIGERTRGINDAHVHFLSGIKNPIGCKIGPDGKPGDIISLAGKLNPDNEPGRLNIIIRMGADKIEDRLPAILNYVKKEGLNILWSIDPMHGNTIKASSGFKTREFNNVMREVKSFFEIHRACGTIAGGVHLEMTGQDVTECVGGAFNVTEDSLGNRYETQCDPRLNADQALELAFLIADLVKKR
>NZ_HG004426.1|WP_025370330.1|686238_687006_+|hypothetical-protein
MAETLKEKFKGVLSANTSYFEGVSDHIISQAQNIARVNQSSKYGVKHYKVLARIDSRTSDICRSMNGRIIPASHIEAQSNNIQNAKDINEKKAAAIWRNEPFLGKILPSNFGLPPYHFRCRTELVPVWINEEEIDGVKMKNTSPLSKDEVVKHIDKTGVERYANKKTFNHSISSNKRKISSSDSVKALNSILKIAPHKDYQNRSVAISQNGYFMIFNGDYLYNIFKPSRNLEKYFKDSAVLNKVEIIKWKFSIFA
>NZ_HG004426.1|WP_002849067.1|686981_687299_+|hypothetical-protein
MEIFNICLAHGWAIESVKNGNFGENAKYDLFAQFDVFYGQIAWIYDICTPSDETIKECEKIAIFKQMCEFNVYISDDNDEGWTKKVNFTGTFIDALEYIKANFGK
>NZ_HG004426.1|WP_002849060.1|687339_687546_+|hypothetical-protein
MTIIEAFNKTKTLQNQNRNAVVKIVKKNYSGYDVQIEPVELTVIKNSLEMISQNANSFMANVNAKYGK
>NZ_HG004426.1|WP_002849074.1|688836_690282_+|acetyl-CoA-carboxylase-subunit-A
MIHKILIANRGEIAVRIVRACKDLHIKNVAIYTEPDRECLHVKVADEAYQIGKDPIKGYLDSKRIVEVAKACGADAIHPGYGFLSENYEFSKEVEDAGLIFIGPNSDIIRKMGNKNIARFLMKKNGIPVVPGTEKLNSETIEAIKNYAVRIGYPVILKASGGGGGRGIRVVWKEDELESSYESCKREAKAFFNNDEVFMEKYIEKPRHIEFQILGDNYGNLIHLCERDCSIQRRHQKVIEIAPCPTISEDLRKRMGVAAVAAAKAVGYTNAGTIEFLLDDYNNFYFMEMNTRIQVEHGVTEEITGVDLISRQIRIAAGEILDIEQNEVRPQGVSIEARITAENVWKNFAPSPGRITGYFPALGPGVRVDSHMYQDYVIPPFYDSLVAKLIVKGTSYDLAVSKLERALDEFKIEGVRTTLPFLLAISKRRHFRRGFFDTSYIEERLQDILENTQDHHQENKEEVIAAIAAAIKKVKEDRAKE
>NZ_HG004426.1|WP_002849076.1|690288_690525_+|hypothetical-protein
MNDFFDSLKNIKNELVKEQKSQEIKVPKKPKPNPNRDEFKDIFAEPNEIEMPDAKEHRLKDEFLEFIKHSDVKKLERD
>NZ_HG004426.1|WP_002849077.1|690511_691228_+|arginyltransferase
MREIDFCTLDTLCPYLEDRNSRTMYRYVSQCSFDYNSNLVKHGYRRFGSYFSKPICDGCDECKSIRIDAFNFKFTKSHRRIINKNSNTKIVVSKPYISQRHIDLYEKYHKFMHEKRGWEYYNLDFRRYYSVYVEGAGDFGYEIDYFVNDELVCVDLVDIVDDGISSIYCYWDIDFAHLSLGKFSLLNQITIALKNDLRWIYLGFYVKDCASLAYKGEYKPYETLKTYCDIDEKPIWEF
>NZ_HG004426.1|WP_011731910.1|691284_692109_+|adenylosuccinate-lyase
MQITQTLESITITTDDCDLFLNLSNKIRQSFANAIGNRDKVIIFYNENELVQRKYFLKLIGKIYANSVGKGIDFLLTHHKNIKLVYKKPNSLQILINVDVKFENSRVVLDLKNSEELFTKYLIRGLGDTRHEYFESKNILVISPKTTEDVELLDNILNFREHLKYIVNFNYDKKAYDEFKKRAKILTSKAYIRRFSMLANLLEEHFETLGCKATDDFETVRTNYLNLTKVYHPDKHAGKPNEVQKSYIDKFQKIGLAYEALKPYFKEQKSFISA
>NZ_HG004426.1|WP_011731911.1|692153_692927_+|pyridoxine-5'-phosphate-synthase
MKLGVNIDHVAVLREARAVNDPQIIHAMFEAVSGGADQITIHLREDRRHINEDDVKNIINLSPIPVNLECSINSEIIDIVCELKPHRATIVPEKREELTTEGGLSLDSLNLKNVISKLNDNDIKVSLFINPKKNDVIMSKELGATCVELHTGAYANTFLMLNSNLNHTKYKIDNLNLKRGELEILLNSELTRIKEAANISTNLGLEVAAGHGLNYQNVTAISSIKDIFELNIGQSIVAKSVFVGLKNAVKEMMELVK
>NZ_HG004426.1|WP_002849081.1|692923_693847_+|4-hydroxythreonine-4-phosphate-dehydrogenase
MSLPKIAISVGDINGVGIEIALKSHDEIKNICSPIYFINNELLNSAANILKFTVPNDFEIFECGSSFNIKPGRVSKKSGKFSFVSFENAILYTQNKRAQALVTMPINKESWKKAGVPYVGHTDALGKYFGKNAIMMLGCEELFVALYTDHLALKDVSAKIKAKNLALFLVDFYNSSKFENIGVLGFNPHASDNETIGGKEEKEIIKAIKSANNRLKKEVFTGPLVSDAAFTKSSLKRCNRLVSMYHDVGLAPLKALYFDKSINVSLNLPIVRTSVDHGTAFDIAYKGKAETKSYIEAIKFAIKLCDY
>NZ_HG004426.1|WP_046037358.1|693981_695463_+|inorganic-phosphate-transporter
MWGYNYIPSNHLLLFILASIFGLFMAFNIGGNDVANSFGTSVGAKTLTLKQALIIAAVFELSGAVFAGAEVTNTIRSGIVSLPRGDVNPMVFVIIMISALFSSGAWLFIATKKGLPVSTTHSIVGGIVGAGMMMGFIYYNGSKTFDMVQWGEIGRIALSWVISPVMGGVMAYLIFGYIKSKIIIPSSRIQSEIKSLKRARKTYKDQYIKELSNKSEAEQIKELRRIAIIDEDECEGENCDFRDKIKAMKEQEKNIDGMVFMRTHIPMVAGVAAMIIAGSMLFKGLKHMDFNLSIIQTIWIIFVIGIAAYLASFAIVNLMKKDNPQKGINRIFGWFQIFTASSFAFSHGANDIANAVGPFAAILDVLKNNTINETTPIPGIAMATFGIALVVGLWFLGKEVIATVGTKLAEILPTTGFSAELAASIVILIATKMGLPISSTHVLIGAVLGIGVYNRNANWGMLKPIGLAWIITLPISMIGSAIGFLVIKNIMGL

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_HG004426_1	1.10\|685240\|37\|NZ_HG004426\|PILER-CR,CRISPRCasFinder,CRT	685240-685276	37	NZ_HG004426.1	728542-728578	1	0.973
NZ_HG004426_1	1.10\|685240\|37\|NZ_HG004426\|PILER-CR,CRISPRCasFinder,CRT	685240-685276	37	NZ_HG004426.1	1289511-1289547	1	0.973
NZ_HG004426_1	1.11\|685307\|36\|NZ_HG004426\|PILER-CR,CRISPRCasFinder,CRT	685307-685342	36	NZ_HG004426.1	725531-725566	2	0.944
NZ_HG004426_1	1.11\|685307\|36\|NZ_HG004426\|PILER-CR,CRISPRCasFinder,CRT	685307-685342	36	NZ_HG004426.1	1292523-1292558	2	0.944

1. spacer 1.10|685240|37|NZ_HG004426|PILER-CR,CRISPRCasFinder,CRT matches to position: 728542-728578, mismatch: 1, identity: 0.973

tccagagctaataagggatttagagcagctaaaaact	CRISPR spacer
tccagagctaataagggatttagagcagctaaagact	Protospacer
*********************************.***

2. spacer 1.10|685240|37|NZ_HG004426|PILER-CR,CRISPRCasFinder,CRT matches to position: 1289511-1289547, mismatch: 1, identity: 0.973

tccagagctaataagggatttagagcagctaaaaact	CRISPR spacer
tccagagctaataagggatttagagcagctaaagact	Protospacer
*********************************.***

3. spacer 1.11|685307|36|NZ_HG004426|PILER-CR,CRISPRCasFinder,CRT matches to position: 725531-725566, mismatch: 2, identity: 0.944

cgcaaaaagagttgaaatatatagataataggttaa	CRISPR spacer
cgcaaaaagaattaaaatatatagataataggttaa	Protospacer
**********.**.**********************

4. spacer 1.11|685307|36|NZ_HG004426|PILER-CR,CRISPRCasFinder,CRT matches to position: 1292523-1292558, mismatch: 2, identity: 0.944

cgcaaaaagagttgaaatatatagataataggttaa	CRISPR spacer
cgcaaaaagaattaaaatatatagataataggttaa	Protospacer
**********.**.**********************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_HG004426_1	1.10\|685240\|37\|NZ_HG004426\|PILER-CR,CRISPRCasFinder,CRT	685240-685276	37	NZ_CP007000	Campylobacter fetus subsp. venerealis cfvi03/293 plasmid pCfviMP1, complete sequence	37229-37265	2	0.946
NZ_HG004426_1	1.10\|685240\|37\|NZ_HG004426\|PILER-CR,CRISPRCasFinder,CRT	685240-685276	37	NZ_CP014569	Campylobacter fetus subsp. venerealis strain 01/165 plasmid mp1, complete sequence	34209-34245	2	0.946
NZ_HG004426_1	1.11\|685307\|36\|NZ_HG004426\|PILER-CR,CRISPRCasFinder,CRT	685307-685342	36	NZ_CP014569	Campylobacter fetus subsp. venerealis strain 01/165 plasmid mp1, complete sequence	8545-8580	2	0.944
NZ_HG004426_1	1.11\|685307\|36\|NZ_HG004426\|PILER-CR,CRISPRCasFinder,CRT	685307-685342	36	NZ_CP007000	Campylobacter fetus subsp. venerealis cfvi03/293 plasmid pCfviMP1, complete sequence	79920-79955	2	0.944
NZ_HG004426_1	1.24\|686163\|36\|NZ_HG004426\|PILER-CR,CRISPRCasFinder,CRT	686163-686198	36	NZ_CP034117	Staphylococcus epidermidis strain CDC121 plasmid pSTA482, complete sequence	6189-6224	7	0.806
NZ_HG004426_1	1.11\|685307\|36\|NZ_HG004426\|PILER-CR,CRISPRCasFinder,CRT	685307-685342	36	NZ_CP013684	Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence	42976-43011	9	0.75
NZ_HG004426_1	1.19\|685834\|36\|NZ_HG004426\|PILER-CR,CRISPRCasFinder,CRT	685834-685869	36	MK448743	Streptococcus phage Javan371, complete genome	12867-12902	9	0.75
NZ_HG004426_1	1.24\|686163\|36\|NZ_HG004426\|PILER-CR,CRISPRCasFinder,CRT	686163-686198	36	KJ018209	Shewanella sp. phage 1/4, complete genome	128607-128642	11	0.694

1. spacer 1.10|685240|37|NZ_HG004426|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007000 (Campylobacter fetus subsp. venerealis cfvi03/293 plasmid pCfviMP1, complete sequence) position: , mismatch: 2, identity: 0.946

tccagagctaataagggatttagagcagctaaaaact	CRISPR spacer
tccggagctaataagggatttagagcagctaaagact	Protospacer
***.*****************************.***

2. spacer 1.10|685240|37|NZ_HG004426|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014569 (Campylobacter fetus subsp. venerealis strain 01/165 plasmid mp1, complete sequence) position: , mismatch: 2, identity: 0.946

tccagagctaataagggatttagagcagctaaaaact	CRISPR spacer
tccggagctaataagggatttagagcagctaaagact	Protospacer
***.*****************************.***

3. spacer 1.11|685307|36|NZ_HG004426|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014569 (Campylobacter fetus subsp. venerealis strain 01/165 plasmid mp1, complete sequence) position: , mismatch: 2, identity: 0.944

cgcaaaaagagttgaaatatatagataataggttaa	CRISPR spacer
cgcaaaaagaattaaaatatatagataataggttaa	Protospacer
**********.**.**********************

4. spacer 1.11|685307|36|NZ_HG004426|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007000 (Campylobacter fetus subsp. venerealis cfvi03/293 plasmid pCfviMP1, complete sequence) position: , mismatch: 2, identity: 0.944

cgcaaaaagagttgaaatatatagataataggttaa	CRISPR spacer
cgcaaaaagaattaaaatatatagataataggttaa	Protospacer
**********.**.**********************

5. spacer 1.24|686163|36|NZ_HG004426|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034117 (Staphylococcus epidermidis strain CDC121 plasmid pSTA482, complete sequence) position: , mismatch: 7, identity: 0.806

catcctccttttaatttattacatttaaacaattta	CRISPR spacer
aatcctcctttgaattcattacatttaaaacatatc	Protospacer
 ********** ****.************  ** *

6. spacer 1.11|685307|36|NZ_HG004426|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013684 (Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence) position: , mismatch: 9, identity: 0.75

cgcaaaaagagttgaaatatatagataataggttaa	CRISPR spacer
tagcaaaatatttgaaatatatagataatagcggaa	Protospacer
..  **** * ********************   **

7. spacer 1.19|685834|36|NZ_HG004426|PILER-CR,CRISPRCasFinder,CRT matches to MK448743 (Streptococcus phage Javan371, complete genome) position: , mismatch: 9, identity: 0.75

tcaccaa-----aaaaaccaggaattaaataaaaagtaaaa	CRISPR spacer
-----aaggatgaaaaagcaggaattaattaaaaagtacga	Protospacer
     **     ***** ********** ********* .*

8. spacer 1.24|686163|36|NZ_HG004426|PILER-CR,CRISPRCasFinder,CRT matches to KJ018209 (Shewanella sp. phage 1/4, complete genome) position: , mismatch: 11, identity: 0.694

catcctccttttaatttattacatttaaacaattta	CRISPR spacer
ggctattattttaattcattacatttaaacacttct	Protospacer
 ... *. ********.************** **.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1485687 : 1496937

Cronobacter_phage(28.57%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002850239.1\|1485687_1486689_+	glycosyltransferase family 2 protein	F1C5B0	Cronobacter_phage	4.8e-61	41.5
WP_011732184.1\|1486693_1488211_+	glucosyltransferase domain-containing protein	F1C5A9	Cronobacter_phage	2.3e-06	24.9
WP_029662383.1\|1488211_1488592_+	GtrA family protein	NA	NA	NA	NA
WP_002850245.1\|1488592_1489585_-	UDP-glucose 4-epimerase GalE	A0A2K9L5H6	Tupanvirus	4.6e-56	41.1
WP_002850250.1\|1489647_1493505_-	restriction endonuclease subunit S	E3T4D5	Cafeteria_roenbergensis_virus	1.3e-10	29.8
WP_002850252.1\|1493583_1493826_-	hypothetical protein	NA	NA	NA	NA
WP_002850254.1\|1493836_1494601_-	DNA ligase	A0A1X9VNU1	Mimivirus	1.7e-34	34.0
WP_002850256.1\|1494651_1495710_-	NAD-dependent epimerase	A0A2K9L4U8	Tupanvirus	7.2e-31	29.1
WP_011732189.1\|1495719_1496937_-	nucleotide sugar dehydrogenase	M1HWZ1	Paramecium_bursaria_Chlorella_virus	1.3e-28	28.9

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage