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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP011147 Staphylococcus aureus strain FCFHV36 chromosome, complete genome 11 crisprs cas3,DEDDh,DinG,csa3,RT,WYL 9 4 8 2

Results visualization

1. NZ_CP011147
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011147_1 420137-420238 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011147_2 770205-770287 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011147_3 811152-811230 Unclear NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011147_4 816607-816876 Unclear NA
4 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011147_5 859890-859971 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011147_6 1600321-1600405 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011147_7 1634800-1634878 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011147_8 2122346-2122427 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011147_9 2251332-2251412 Orphan NA
1 spacers
csa3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011147_10 2263653-2263738 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011147_11 2371526-2371606 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP011147_4 4.1|816643|22|NZ_CP011147|CRT 816643-816664 22 NZ_CP011147.1 182025-182046 0 1.0
NZ_CP011147_4 4.1|816643|22|NZ_CP011147|CRT 816643-816664 22 NZ_CP011147.1 305101-305122 0 1.0
NZ_CP011147_4 4.1|816643|22|NZ_CP011147|CRT 816643-816664 22 NZ_CP011147.1 643137-643158 0 1.0
NZ_CP011147_4 4.1|816643|22|NZ_CP011147|CRT 816643-816664 22 NZ_CP011147.1 769246-769267 0 1.0
NZ_CP011147_4 4.1|816643|22|NZ_CP011147|CRT 816643-816664 22 NZ_CP011147.1 859963-859984 0 1.0
NZ_CP011147_4 4.1|816643|22|NZ_CP011147|CRT 816643-816664 22 NZ_CP011147.1 1334504-1334525 0 1.0
NZ_CP011147_4 4.1|816643|22|NZ_CP011147|CRT 816643-816664 22 NZ_CP011147.1 1600397-1600418 0 1.0
NZ_CP011147_4 4.1|816643|22|NZ_CP011147|CRT 816643-816664 22 NZ_CP011147.1 1614931-1614952 0 1.0
NZ_CP011147_4 4.1|816643|22|NZ_CP011147|CRT 816643-816664 22 NZ_CP011147.1 2021466-2021487 0 1.0
NZ_CP011147_4 4.3|816760|22|NZ_CP011147|CRT 816760-816781 22 NZ_CP011147.1 182025-182046 0 1.0
NZ_CP011147_4 4.3|816760|22|NZ_CP011147|CRT 816760-816781 22 NZ_CP011147.1 305101-305122 0 1.0
NZ_CP011147_4 4.3|816760|22|NZ_CP011147|CRT 816760-816781 22 NZ_CP011147.1 643137-643158 0 1.0
NZ_CP011147_4 4.3|816760|22|NZ_CP011147|CRT 816760-816781 22 NZ_CP011147.1 769246-769267 0 1.0
NZ_CP011147_4 4.3|816760|22|NZ_CP011147|CRT 816760-816781 22 NZ_CP011147.1 859963-859984 0 1.0
NZ_CP011147_4 4.3|816760|22|NZ_CP011147|CRT 816760-816781 22 NZ_CP011147.1 1334504-1334525 0 1.0
NZ_CP011147_4 4.3|816760|22|NZ_CP011147|CRT 816760-816781 22 NZ_CP011147.1 1600397-1600418 0 1.0
NZ_CP011147_4 4.3|816760|22|NZ_CP011147|CRT 816760-816781 22 NZ_CP011147.1 1614931-1614952 0 1.0
NZ_CP011147_4 4.3|816760|22|NZ_CP011147|CRT 816760-816781 22 NZ_CP011147.1 2021466-2021487 0 1.0
NZ_CP011147_8 8.1|2122370|34|NZ_CP011147|CRISPRCasFinder 2122370-2122403 34 NZ_CP011147.1 811151-811184 0 1.0
NZ_CP011147_8 8.1|2122370|34|NZ_CP011147|CRISPRCasFinder 2122370-2122403 34 NZ_CP011147.1 1122858-1122891 0 1.0
NZ_CP011147_4 4.1|816643|22|NZ_CP011147|CRT 816643-816664 22 NZ_CP011147.1 930193-930214 1 0.955
NZ_CP011147_4 4.1|816643|22|NZ_CP011147|CRT 816643-816664 22 NZ_CP011147.1 1634659-1634680 1 0.955
NZ_CP011147_4 4.2|816701|23|NZ_CP011147|CRT 816701-816723 23 NZ_CP011147.1 770196-770218 1 0.957
NZ_CP011147_4 4.2|816701|23|NZ_CP011147|CRT 816701-816723 23 NZ_CP011147.1 770474-770496 1 0.957
NZ_CP011147_4 4.2|816701|23|NZ_CP011147|CRT 816701-816723 23 NZ_CP011147.1 1334620-1334642 1 0.957
NZ_CP011147_4 4.2|816701|23|NZ_CP011147|CRT 816701-816723 23 NZ_CP011147.1 2021524-2021546 1 0.957
NZ_CP011147_4 4.2|816701|23|NZ_CP011147|CRT 816701-816723 23 NZ_CP011147.1 2360697-2360719 1 0.957
NZ_CP011147_4 4.3|816760|22|NZ_CP011147|CRT 816760-816781 22 NZ_CP011147.1 930193-930214 1 0.955
NZ_CP011147_4 4.3|816760|22|NZ_CP011147|CRT 816760-816781 22 NZ_CP011147.1 1634659-1634680 1 0.955
NZ_CP011147_4 4.4|816818|23|NZ_CP011147|CRT 816818-816840 23 NZ_CP011147.1 770196-770218 1 0.957
NZ_CP011147_4 4.4|816818|23|NZ_CP011147|CRT 816818-816840 23 NZ_CP011147.1 770474-770496 1 0.957
NZ_CP011147_4 4.4|816818|23|NZ_CP011147|CRT 816818-816840 23 NZ_CP011147.1 1334620-1334642 1 0.957
NZ_CP011147_4 4.4|816818|23|NZ_CP011147|CRT 816818-816840 23 NZ_CP011147.1 2021524-2021546 1 0.957
NZ_CP011147_4 4.4|816818|23|NZ_CP011147|CRT 816818-816840 23 NZ_CP011147.1 2360697-2360719 1 0.957
NZ_CP011147_5 5.1|859914|34|NZ_CP011147|CRISPRCasFinder 859914-859947 34 NZ_CP011147.1 1334600-1334633 1 0.971
NZ_CP011147_6 6.1|1600347|33|NZ_CP011147|CRISPRCasFinder 1600347-1600379 33 NZ_CP011147.1 1334601-1334633 1 0.97
NZ_CP011147_8 8.1|2122370|34|NZ_CP011147|CRISPRCasFinder 2122370-2122403 34 NZ_CP011147.1 1726960-1726993 1 0.971
NZ_CP011147_11 11.1|2371551|31|NZ_CP011147|CRISPRCasFinder 2371551-2371581 31 NZ_CP011147.1 823895-823925 1 0.968
NZ_CP011147_11 11.1|2371551|31|NZ_CP011147|CRISPRCasFinder 2371551-2371581 31 NZ_CP011147.1 823951-823981 1 0.968
NZ_CP011147_4 4.2|816701|23|NZ_CP011147|CRT 816701-816723 23 NZ_CP011147.1 1422940-1422962 2 0.913
NZ_CP011147_4 4.2|816701|23|NZ_CP011147|CRT 816701-816723 23 NZ_CP011147.1 2122427-2122449 2 0.913
NZ_CP011147_4 4.4|816818|23|NZ_CP011147|CRT 816818-816840 23 NZ_CP011147.1 1422940-1422962 2 0.913
NZ_CP011147_4 4.4|816818|23|NZ_CP011147|CRT 816818-816840 23 NZ_CP011147.1 2122427-2122449 2 0.913
NZ_CP011147_7 7.1|1634824|31|NZ_CP011147|CRISPRCasFinder 1634824-1634854 31 NZ_CP011147.1 182025-182055 2 0.935
NZ_CP011147_7 7.1|1634824|31|NZ_CP011147|CRISPRCasFinder 1634824-1634854 31 NZ_CP011147.1 643137-643167 2 0.935
NZ_CP011147_7 7.1|1634824|31|NZ_CP011147|CRISPRCasFinder 1634824-1634854 31 NZ_CP011147.1 769237-769267 2 0.935
NZ_CP011147_7 7.1|1634824|31|NZ_CP011147|CRISPRCasFinder 1634824-1634854 31 NZ_CP011147.1 859954-859984 2 0.935
NZ_CP011147_7 7.1|1634824|31|NZ_CP011147|CRISPRCasFinder 1634824-1634854 31 NZ_CP011147.1 1600388-1600418 2 0.935
NZ_CP011147_7 7.1|1634824|31|NZ_CP011147|CRISPRCasFinder 1634824-1634854 31 NZ_CP011147.1 1614931-1614961 2 0.935
NZ_CP011147_8 8.1|2122370|34|NZ_CP011147|CRISPRCasFinder 2122370-2122403 34 NZ_CP011147.1 1338974-1339007 2 0.941
NZ_CP011147_8 8.1|2122370|34|NZ_CP011147|CRISPRCasFinder 2122370-2122403 34 NZ_CP011147.1 2808923-2808956 2 0.941
NZ_CP011147_11 11.1|2371551|31|NZ_CP011147|CRISPRCasFinder 2371551-2371581 31 NZ_CP011147.1 83382-83412 2 0.935
NZ_CP011147_11 11.1|2371551|31|NZ_CP011147|CRISPRCasFinder 2371551-2371581 31 NZ_CP011147.1 381399-381429 2 0.935
NZ_CP011147_11 11.1|2371551|31|NZ_CP011147|CRISPRCasFinder 2371551-2371581 31 NZ_CP011147.1 643192-643222 2 0.935
NZ_CP011147_11 11.1|2371551|31|NZ_CP011147|CRISPRCasFinder 2371551-2371581 31 NZ_CP011147.1 824007-824037 2 0.935
NZ_CP011147_11 11.1|2371551|31|NZ_CP011147|CRISPRCasFinder 2371551-2371581 31 NZ_CP011147.1 860226-860256 2 0.935
NZ_CP011147_11 11.1|2371551|31|NZ_CP011147|CRISPRCasFinder 2371551-2371581 31 NZ_CP011147.1 1026191-1026221 2 0.935
NZ_CP011147_11 11.1|2371551|31|NZ_CP011147|CRISPRCasFinder 2371551-2371581 31 NZ_CP011147.1 1128459-1128489 2 0.935
NZ_CP011147_11 11.1|2371551|31|NZ_CP011147|CRISPRCasFinder 2371551-2371581 31 NZ_CP011147.1 1334559-1334589 2 0.935
NZ_CP011147_11 11.1|2371551|31|NZ_CP011147|CRISPRCasFinder 2371551-2371581 31 NZ_CP011147.1 1422993-1423023 2 0.935
NZ_CP011147_11 11.1|2371551|31|NZ_CP011147|CRISPRCasFinder 2371551-2371581 31 NZ_CP011147.1 1614985-1615015 2 0.935
NZ_CP011147_11 11.1|2371551|31|NZ_CP011147|CRISPRCasFinder 2371551-2371581 31 NZ_CP011147.1 2360750-2360780 2 0.935
NZ_CP011147_11 11.1|2371551|31|NZ_CP011147|CRISPRCasFinder 2371551-2371581 31 NZ_CP011147.1 2536217-2536247 2 0.935

1. spacer 4.1|816643|22|NZ_CP011147|CRT matches to position: 182025-182046, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

2. spacer 4.1|816643|22|NZ_CP011147|CRT matches to position: 305101-305122, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

3. spacer 4.1|816643|22|NZ_CP011147|CRT matches to position: 643137-643158, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

4. spacer 4.1|816643|22|NZ_CP011147|CRT matches to position: 769246-769267, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

5. spacer 4.1|816643|22|NZ_CP011147|CRT matches to position: 859963-859984, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

6. spacer 4.1|816643|22|NZ_CP011147|CRT matches to position: 1334504-1334525, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

7. spacer 4.1|816643|22|NZ_CP011147|CRT matches to position: 1600397-1600418, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

8. spacer 4.1|816643|22|NZ_CP011147|CRT matches to position: 1614931-1614952, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

9. spacer 4.1|816643|22|NZ_CP011147|CRT matches to position: 2021466-2021487, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

10. spacer 4.3|816760|22|NZ_CP011147|CRT matches to position: 182025-182046, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

11. spacer 4.3|816760|22|NZ_CP011147|CRT matches to position: 305101-305122, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

12. spacer 4.3|816760|22|NZ_CP011147|CRT matches to position: 643137-643158, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

13. spacer 4.3|816760|22|NZ_CP011147|CRT matches to position: 769246-769267, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

14. spacer 4.3|816760|22|NZ_CP011147|CRT matches to position: 859963-859984, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

15. spacer 4.3|816760|22|NZ_CP011147|CRT matches to position: 1334504-1334525, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

16. spacer 4.3|816760|22|NZ_CP011147|CRT matches to position: 1600397-1600418, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

17. spacer 4.3|816760|22|NZ_CP011147|CRT matches to position: 1614931-1614952, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

18. spacer 4.3|816760|22|NZ_CP011147|CRT matches to position: 2021466-2021487, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

19. spacer 8.1|2122370|34|NZ_CP011147|CRISPRCasFinder matches to position: 811151-811184, mismatch: 0, identity: 1.0

ttgtagaatttcttttcgaaattctctgtgttgg	CRISPR spacer
ttgtagaatttcttttcgaaattctctgtgttgg	Protospacer
**********************************

20. spacer 8.1|2122370|34|NZ_CP011147|CRISPRCasFinder matches to position: 1122858-1122891, mismatch: 0, identity: 1.0

ttgtagaatttcttttcgaaattctctgtgttgg	CRISPR spacer
ttgtagaatttcttttcgaaattctctgtgttgg	Protospacer
**********************************

21. spacer 4.1|816643|22|NZ_CP011147|CRT matches to position: 930193-930214, mismatch: 1, identity: 0.955

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttagaaa	Protospacer
***************** ****

22. spacer 4.1|816643|22|NZ_CP011147|CRT matches to position: 1634659-1634680, mismatch: 1, identity: 0.955

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttctttacgaaa	Protospacer
**************** *****

23. spacer 4.2|816701|23|NZ_CP011147|CRT matches to position: 770196-770218, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

24. spacer 4.2|816701|23|NZ_CP011147|CRT matches to position: 770474-770496, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

25. spacer 4.2|816701|23|NZ_CP011147|CRT matches to position: 1334620-1334642, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

26. spacer 4.2|816701|23|NZ_CP011147|CRT matches to position: 2021524-2021546, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

27. spacer 4.2|816701|23|NZ_CP011147|CRT matches to position: 2360697-2360719, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

28. spacer 4.3|816760|22|NZ_CP011147|CRT matches to position: 930193-930214, mismatch: 1, identity: 0.955

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttagaaa	Protospacer
***************** ****

29. spacer 4.3|816760|22|NZ_CP011147|CRT matches to position: 1634659-1634680, mismatch: 1, identity: 0.955

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttctttacgaaa	Protospacer
**************** *****

30. spacer 4.4|816818|23|NZ_CP011147|CRT matches to position: 770196-770218, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

31. spacer 4.4|816818|23|NZ_CP011147|CRT matches to position: 770474-770496, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

32. spacer 4.4|816818|23|NZ_CP011147|CRT matches to position: 1334620-1334642, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

33. spacer 4.4|816818|23|NZ_CP011147|CRT matches to position: 2021524-2021546, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

34. spacer 4.4|816818|23|NZ_CP011147|CRT matches to position: 2360697-2360719, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

35. spacer 5.1|859914|34|NZ_CP011147|CRISPRCasFinder matches to position: 1334600-1334633, mismatch: 1, identity: 0.971

attgagaatccaatttctctttgttggggcccat	CRISPR spacer
attgggaatccaatttctctttgttggggcccat	Protospacer
****.*****************************

36. spacer 6.1|1600347|33|NZ_CP011147|CRISPRCasFinder matches to position: 1334601-1334633, mismatch: 1, identity: 0.97

attgggaatccaatttctctgtgttggggccca	CRISPR spacer
attgggaatccaatttctctttgttggggccca	Protospacer
******************** ************

37. spacer 8.1|2122370|34|NZ_CP011147|CRISPRCasFinder matches to position: 1726960-1726993, mismatch: 1, identity: 0.971

ttgtagaatttcttttcgaaattctctgtgttgg	CRISPR spacer
ttgtagaatttcttttcgaaattctttgtgttgg	Protospacer
*************************.********

38. spacer 11.1|2371551|31|NZ_CP011147|CRISPRCasFinder matches to position: 823895-823925, mismatch: 1, identity: 0.968

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgactttccgtcagct	Protospacer
***********************.*******

39. spacer 11.1|2371551|31|NZ_CP011147|CRISPRCasFinder matches to position: 823951-823981, mismatch: 1, identity: 0.968

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgactttccgtcagct	Protospacer
***********************.*******

40. spacer 4.2|816701|23|NZ_CP011147|CRT matches to position: 1422940-1422962, mismatch: 2, identity: 0.913

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatacaat	Protospacer
**************.*** ****

41. spacer 4.2|816701|23|NZ_CP011147|CRT matches to position: 2122427-2122449, mismatch: 2, identity: 0.913

tctgtagaaattggaaatccaat	CRISPR spacer
tctgttgaaattgggaatccaat	Protospacer
***** ********.********

42. spacer 4.4|816818|23|NZ_CP011147|CRT matches to position: 1422940-1422962, mismatch: 2, identity: 0.913

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatacaat	Protospacer
**************.*** ****

43. spacer 4.4|816818|23|NZ_CP011147|CRT matches to position: 2122427-2122449, mismatch: 2, identity: 0.913

tctgtagaaattggaaatccaat	CRISPR spacer
tctgttgaaattgggaatccaat	Protospacer
***** ********.********

44. spacer 7.1|1634824|31|NZ_CP011147|CRISPRCasFinder matches to position: 182025-182055, mismatch: 2, identity: 0.935

cttccattgcctgtagaatttctttacgaaa	CRISPR spacer
cttgcattgcctgtagaatttcttttcgaaa	Protospacer
*** ********************* *****

45. spacer 7.1|1634824|31|NZ_CP011147|CRISPRCasFinder matches to position: 643137-643167, mismatch: 2, identity: 0.935

cttccattgcctgtagaatttctttacgaaa	CRISPR spacer
cttgcattgcctgtagaatttcttttcgaaa	Protospacer
*** ********************* *****

46. spacer 7.1|1634824|31|NZ_CP011147|CRISPRCasFinder matches to position: 769237-769267, mismatch: 2, identity: 0.935

cttccattgcctgtagaatttctttacgaaa	CRISPR spacer
cttgcattgcctgtagaatttcttttcgaaa	Protospacer
*** ********************* *****

47. spacer 7.1|1634824|31|NZ_CP011147|CRISPRCasFinder matches to position: 859954-859984, mismatch: 2, identity: 0.935

cttccattgcctgtagaatttctttacgaaa	CRISPR spacer
cttgcattgcctgtagaatttcttttcgaaa	Protospacer
*** ********************* *****

48. spacer 7.1|1634824|31|NZ_CP011147|CRISPRCasFinder matches to position: 1600388-1600418, mismatch: 2, identity: 0.935

cttccattgcctgtagaatttctttacgaaa	CRISPR spacer
cttgcattgcctgtagaatttcttttcgaaa	Protospacer
*** ********************* *****

49. spacer 7.1|1634824|31|NZ_CP011147|CRISPRCasFinder matches to position: 1614931-1614961, mismatch: 2, identity: 0.935

cttccattgcctgtagaatttctttacgaaa	CRISPR spacer
cttgcattgcctgtagaatttcttttcgaaa	Protospacer
*** ********************* *****

50. spacer 8.1|2122370|34|NZ_CP011147|CRISPRCasFinder matches to position: 1338974-1339007, mismatch: 2, identity: 0.941

ttgtagaatttcttttcgaaattctctgtgttgg	CRISPR spacer
ttgtggaatttcttatcgaaattctctgtgttgg	Protospacer
****.********* *******************

51. spacer 8.1|2122370|34|NZ_CP011147|CRISPRCasFinder matches to position: 2808923-2808956, mismatch: 2, identity: 0.941

ttgtagaatttcttttcgaaattctctgtgttgg	CRISPR spacer
ttgtagaatttcttttcgaaattctttttgttgg	Protospacer
*************************.* ******

52. spacer 11.1|2371551|31|NZ_CP011147|CRISPRCasFinder matches to position: 83382-83412, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgactttccgccagct	Protospacer
***********************.*.*****

53. spacer 11.1|2371551|31|NZ_CP011147|CRISPRCasFinder matches to position: 381399-381429, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgacttttcgtcagct	Protospacer
**********************..*******

54. spacer 11.1|2371551|31|NZ_CP011147|CRISPRCasFinder matches to position: 643192-643222, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgacttttcgtcagct	Protospacer
**********************..*******

55. spacer 11.1|2371551|31|NZ_CP011147|CRISPRCasFinder matches to position: 824007-824037, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgactttccgccagct	Protospacer
***********************.*.*****

56. spacer 11.1|2371551|31|NZ_CP011147|CRISPRCasFinder matches to position: 860226-860256, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgactttccgccagct	Protospacer
***********************.*.*****

57. spacer 11.1|2371551|31|NZ_CP011147|CRISPRCasFinder matches to position: 1026191-1026221, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgacttttcgtcagct	Protospacer
**********************..*******

58. spacer 11.1|2371551|31|NZ_CP011147|CRISPRCasFinder matches to position: 1128459-1128489, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgacttttcgtcagct	Protospacer
**********************..*******

59. spacer 11.1|2371551|31|NZ_CP011147|CRISPRCasFinder matches to position: 1334559-1334589, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgacttttcgtcagct	Protospacer
**********************..*******

60. spacer 11.1|2371551|31|NZ_CP011147|CRISPRCasFinder matches to position: 1422993-1423023, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgacttttcgtcagct	Protospacer
**********************..*******

61. spacer 11.1|2371551|31|NZ_CP011147|CRISPRCasFinder matches to position: 1614985-1615015, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgactttccgccagct	Protospacer
***********************.*.*****

62. spacer 11.1|2371551|31|NZ_CP011147|CRISPRCasFinder matches to position: 2360750-2360780, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgacttttcgtcagct	Protospacer
**********************..*******

63. spacer 11.1|2371551|31|NZ_CP011147|CRISPRCasFinder matches to position: 2536217-2536247, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgactttccgccagct	Protospacer
***********************.*.*****

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP011147_4 4.2|816701|23|NZ_CP011147|CRT 816701-816723 23 AP014226 Uncultured Mediterranean phage uvMED isolate uvMED-GF-C9-MedDCM-OCT-S44-C3, *** SEQUENCING IN PROGRESS *** 28490-28512 3 0.87
NZ_CP011147_4 4.2|816701|23|NZ_CP011147|CRT 816701-816723 23 AP014225 Uncultured Mediterranean phage uvMED isolate uvMED-GF-C9-MedDCM-OCT-S41-C89, *** SEQUENCING IN PROGRESS *** 24653-24675 3 0.87
NZ_CP011147_4 4.4|816818|23|NZ_CP011147|CRT 816818-816840 23 AP014226 Uncultured Mediterranean phage uvMED isolate uvMED-GF-C9-MedDCM-OCT-S44-C3, *** SEQUENCING IN PROGRESS *** 28490-28512 3 0.87
NZ_CP011147_4 4.4|816818|23|NZ_CP011147|CRT 816818-816840 23 AP014225 Uncultured Mediterranean phage uvMED isolate uvMED-GF-C9-MedDCM-OCT-S41-C89, *** SEQUENCING IN PROGRESS *** 24653-24675 3 0.87
NZ_CP011147_10 10.1|2263679|34|NZ_CP011147|CRISPRCasFinder 2263679-2263712 34 JN882286 Cronobacter phage vB_CsaP_GAP52, complete genome 23034-23067 8 0.765
NZ_CP011147_10 10.1|2263679|34|NZ_CP011147|CRISPRCasFinder 2263679-2263712 34 CP030544 Staphylococcus aureus strain ER04166.3 plasmid unnamed2, complete sequence 7567-7600 8 0.765
NZ_CP011147_7 7.1|1634824|31|NZ_CP011147|CRISPRCasFinder 1634824-1634854 31 NZ_CP045275 Bacillus megaterium strain FDU301 plasmid pFDU301C, complete sequence 4582-4612 9 0.71

1. spacer 4.2|816701|23|NZ_CP011147|CRT matches to AP014226 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C9-MedDCM-OCT-S44-C3, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 3, identity: 0.87

tctgtagaaattggaaatccaat	CRISPR spacer
actgtagaaaatggaaatccaac	Protospacer
 ********* ***********.

2. spacer 4.2|816701|23|NZ_CP011147|CRT matches to AP014225 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C9-MedDCM-OCT-S41-C89, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 3, identity: 0.87

tctgtagaaattggaaatccaat	CRISPR spacer
actgtagaaaatggaaatccaac	Protospacer
 ********* ***********.

3. spacer 4.4|816818|23|NZ_CP011147|CRT matches to AP014226 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C9-MedDCM-OCT-S44-C3, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 3, identity: 0.87

tctgtagaaattggaaatccaat	CRISPR spacer
actgtagaaaatggaaatccaac	Protospacer
 ********* ***********.

4. spacer 4.4|816818|23|NZ_CP011147|CRT matches to AP014225 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C9-MedDCM-OCT-S41-C89, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 3, identity: 0.87

tctgtagaaattggaaatccaat	CRISPR spacer
actgtagaaaatggaaatccaac	Protospacer
 ********* ***********.

5. spacer 10.1|2263679|34|NZ_CP011147|CRISPRCasFinder matches to JN882286 (Cronobacter phage vB_CsaP_GAP52, complete genome) position: , mismatch: 8, identity: 0.765

ttgcatatctttagctttattgtttgcaactggg	CRISPR spacer
ttgcatatctttagctttatagcttttatatgct	Protospacer
******************** *.** .*  **  

6. spacer 10.1|2263679|34|NZ_CP011147|CRISPRCasFinder matches to CP030544 (Staphylococcus aureus strain ER04166.3 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.765

ttgcatatctttagctttattgtttgcaactggg	CRISPR spacer
ttgaataactttagctttattgttataaacagta	Protospacer
*** *** ****************   *** * .

7. spacer 7.1|1634824|31|NZ_CP011147|CRISPRCasFinder matches to NZ_CP045275 (Bacillus megaterium strain FDU301 plasmid pFDU301C, complete sequence) position: , mismatch: 9, identity: 0.71

cttccattgcctgtagaatttctttacgaaa	CRISPR spacer
agcgaattgcctctagaatttcattacgagc	Protospacer
  .  ******* ********* ******. 

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 748324 : 756145 10 Hokovirus(16.67%) NA NA
DBSCAN-SWA_2 768116 : 782757 14 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_3 955649 : 1007663 52 Streptococcus_phage(33.33%) bacteriocin,protease,tRNA NA
DBSCAN-SWA_4 1027701 : 1036174 9 Synechococcus_phage(33.33%) NA NA
DBSCAN-SWA_5 1649932 : 1658975 7 uncultured_Mediterranean_phage(50.0%) tRNA NA
DBSCAN-SWA_6 1788966 : 1845783 51 Staphylococcus_phage(95.12%) protease,tRNA NA
DBSCAN-SWA_7 1888099 : 2010148 149 Staphylococcus_phage(83.33%) integrase,portal,head,holin,plate,tail,terminase,capsid,transposase,protease,tRNA attL 1975966:1975980|attR 2011154:2011168
DBSCAN-SWA_8 2031464 : 2127310 114 Staphylococcus_phage(84.62%) integrase,portal,head,holin,tail,terminase,capsid,protease,tRNA attL 2030800:2030824|attR 2129518:2129542
Click the colored protein region to show detailed information
Click the colored protein region to show detailed information
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
NZ_CP011147.1|WP_000681968.1|2070122_2070299_-|hypothetical-protein 2070122_2070299_- 58 aa aa NA NA NA 2031464-2127310 yes
NZ_CP011147.1|WP_000990056.1|2070541_2070640_-|hypothetical-protein 2070541_2070640_- 32 aa aa NA NA NA 2031464-2127310 yes