CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP011150	Bacillus altitudinis strain W3 chromosome, complete genome	1 crisprs	csa3,DEDDh,WYL,DinG,cas3	27	0	9	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP011150_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011150_1

1879046-1881792

Orphan

Consensus_repeat	Method
GGTATCACAGGTTCAACCGGNNCNACTGG	CRT

37 spacers

The CRISPR arrays of NZ_CP011150_1

>merge|NZ_CP011150|1|1879046-1881792|CRT
GGAATTACAGGTTCAACTGGAGCTACTGGGGCCACAGGTATCACGGGTGCTACCGGTCCGACTGGTGCCACGGGTATCACAGGTTCAACCGGTCCGACTGGTGCTACTGGTATCACAGGTTCAACCGGACCTACTGGTGCTACAGGTATCACAGGTGCTACCGGAGCTACTGGTGCTACAGGTATCACAGGTGCTACCGGTCCGACTGGGGTCACTGGTAGCACAGGTTCAACTGGAGCTACTGGTGCCACGGGTATCACAGGTTCAACCGGTCCGACTGGTGCCACGGGTATCACAGGTTCAACCGGTCCGACTGGTGCTACTGGTGCTACAGGAATTACAGGTTCAACCGGATCTACTGGGGCCACTGGAATCACGGGTGCAACTGGAGCTACTGGTGCCACGGGTATCACAGGTTCAACCGGACCTACTGGTGCTACAGGTAGCACAGGTTCAACCGGATCTACTGGGGCCACGGGTATCACAGGTTCAACCGGTCCGACTGGTGCTACAGGAATTACAGGTTCAACCGGACCTACTGGGGCCACTGGTGTGACGGGCAGCACTGGACCAACTGGTCCGACTGGAGCTACGGGAATCACAGGTGCAACCGGTCCGACTGGTGCTACAGGTATCACAGGTTCAACCGGTCCGACTGGTGCTACTGGTATCACGGGTGCAACTGGAGCTACTGGTGCTACAGGAATTACAGGTTCAACCGGTCCGACTGGTGCTACTGGTATCACAGGTTCAACCGGTCCGACTGGGGCCACTGGAATCACGGGTGCAACTGGAGCTACTGGTGCCACGGGTATCACAGGTTCAACCGGTCCGACTGGTGCTACTGGTGCTACAGGAATTACAGGTTCAACCGGTCCGACTGGTGCTACAGGTATCACAGGTTCAACCGGTCCGACTGGGGCCACTGGAATCACGGGTGCAACTGGAGCTACTGGTGCCACGGGTATCACAGGTTCAACCGGTCCGACTGGTGCTACTGGTATCACAGGTTCAACCGGACCTACTGGGGCCACTGGTGTGACGGGCAGCACTGGACCAACTGGTCCGACTGGAGCTACGGGAATCACAGGTTCAACCGGTCCGACTGGTGCTACTGGTATCACAGGTTCAACCGGTCCGACTGGTGCTACTGGTATCACGGGTGCAACTGGAGCTACTGGTGCTACAGGAATTACAGGTTCAACCGGTCCGACTGGTGCTACAGGTATCACAGGTGCTACCGGTCCGACTGGGGTCACTGGTAGCACAGGTTCAACTGGAGCTACTGGGGCCACTGGAATCACAGGTTCAACCGGAGCTACTGGTGCTACTGGTATCACAGGTTCAACCGGACCTACTGGGGCCACGGGTATCACAGGTTCAACCGGATCTACTGGTGCCACGGGTATCACAGGTTCAACCGGTCCGACTGGTGCTACAGGAATTACAGGTTCAACTGGAGCTACTGGGGCCACAGGTATCACGGGTGCTACCGGTCCGACTGGGGCCACGGGTATCACAGGTTCAACCGGTCCGACTGGTGCTACTGGTATCACAGGTTCAACCGGACCTACTGGTGCTACTGGTATCACAGGTGCTACCGGAGCTACTGGGGCCACGGGTATCACAGGTTCAACCGGTCCGACTGGTGCTACTGGTGCTACAGGAATTACAGGTTCAACCGGATCTACTGGGGCCACAGGTATCACGGGTGCTACCGGTCCGACTGGTGCTACAGGTATCACAGGTGCTACCGGTCCGACTGGGGTCACTGGTAGCACAGGTTCAACTGGAGCTACTGGGGCCACGGGTATCACAGGTTCAACCGGACCTACTGGTGCTACTGGTATCACAGGTTCAACCGGACCTACTGGGGCCACGGGTATCACAGGTTCAACCGGAGCTACTGGTGCCACGGGTATCACAGGTTCAACCGGAGCTACTGGTGCCACTGGAATCACGGGTGCAACTGGAGCTACTGGTGCCACGGGTATCACAGGTTCAACCGGTCCGACTGGTGCTACTGGTATCACAGGTTCAACCGGTCCGACTGGGGCCACTGGTGTGACGGGCAGCACTGGACCAACTGGTCCGACTGGAGCTACGGGAATCACAGGTTCAACCGGTCCGACTGGTGCTACTGGTATCACAGGTTCAACCGGTCCGACTGGTGCTACTGGTATCACGGGTGCAACTGGAGCTACTGGTGCTACAGGAATTACAGGTTCAACCGGTCCGACTGGTGCTACAGGTATCACAGGTGCTACCGGTCCGACTGGGGTCACTGGTAGCACAGGTTCAACTGGAGCTACTGGGGCCACGGGTATCACAGGTTCAACCGGACCTACTGGGGCCACTGGAATCACGGGTGCAACTGGAGCTACTGGGGCCACGGGTATCACAGGTTCAACCGGAGCTACTGGTGCTACTGGTATCACAGGTTCAACCGGAGCTACTGGGGCCACTGGAATCACGGGTGCAACTGGAGCTACTGGGGCCACGGGTATCACAGGTTCAACCGGAGCTACTGGTGCTACTGGTATCACAGGTTCAACCGGATCTACTGGTGCCACGGGTATCACAGGTTCAACCGGTCCGACTGGTGCTACAGGAATTACAGGTTCAACTGGAGCTACTGGGGCCACAGGTATCACAGGTGCAACCGGTCCGACTGGTGCTACTGGTATCACAGGTTCAACCGGACCTACTGGAGCAACGGGTATCACGGGTGCTACTGGATCTACTGG

>NZ_CP011150|1|1|1879046-1881792|CRT
GGAATTACAGGTTCAACTGGAGCTACTGG	GGCCACAGGTATCACGGGTGCTACCGGTCCGACTGGTGCCACG
GGTATCACAGGTTCAACCGGTCCGACTGG	TGCTACTGGTATCACAGGTTCAACCGGACCTACTGGTGCTACA
GGTATCACAGGTGCTACCGGAGCTACTGG	TGCTACAGGTATCACAGGTGCTACCGGTCCGACTGGGGTCACT
GGTAGCACAGGTTCAACTGGAGCTACTGG	TGCCACGGGTATCACAGGTTCAACCGGTCCGACTGGTGCCACG
GGTATCACAGGTTCAACCGGTCCGACTGG	TGCTACTGGTGCTACAGGAATTACAGGTTCAACCGGATCTACTGGGGCCACT
GGAATCACGGGTGCAACTGGAGCTACTGG	TGCCACGGGTATCACAGGTTCAACCGGACCTACTGGTGCTACA
GGTAGCACAGGTTCAACCGGATCTACTGG	GGCCACGGGTATCACAGGTTCAACCGGTCCGACTGGTGCTACA
GGAATTACAGGTTCAACCGGACCTACTGG	GGCCACTGGTGTGACGGGCAGCACTGGACCAACTGGTCCGACTGGAGCTACG
GGAATCACAGGTGCAACCGGTCCGACTGG	TGCTACAGGTATCACAGGTTCAACCGGTCCGACTGGTGCTACT
GGTATCACGGGTGCAACTGGAGCTACTGG	TGCTACAGGAATTACAGGTTCAACCGGTCCGACTGGTGCTACT
GGTATCACAGGTTCAACCGGTCCGACTGG	GGCCACTGGAATCACGGGTGCAACTGGAGCTACTGGTGCCACG
GGTATCACAGGTTCAACCGGTCCGACTGG	TGCTACTGGTGCTACAGGAATTACAGGTTCAACCGGTCCGACTGGTGCTACA
GGTATCACAGGTTCAACCGGTCCGACTGG	GGCCACTGGAATCACGGGTGCAACTGGAGCTACTGGTGCCACG
GGTATCACAGGTTCAACCGGTCCGACTGG	TGCTACTGGTATCACAGGTTCAACCGGACCTACTGGGGCCACTGGTGTGACG
GGCAGCACTGGACCAACTGGTCCGACTGG	AGCTACGGGAATCACAGGTTCAACCGGTCCGACTGGTGCTACT
GGTATCACAGGTTCAACCGGTCCGACTGG	TGCTACTGGTATCACGGGTGCAACTGGAGCTACTGGTGCTACA
GGAATTACAGGTTCAACCGGTCCGACTGG	TGCTACAGGTATCACAGGTGCTACCGGTCCGACTGGGGTCACT
GGTAGCACAGGTTCAACTGGAGCTACTGG	GGCCACTGGAATCACAGGTTCAACCGGAGCTACTGGTGCTACT
GGTATCACAGGTTCAACCGGACCTACTGG	GGCCACGGGTATCACAGGTTCAACCGGATCTACTGGTGCCACG
GGTATCACAGGTTCAACCGGTCCGACTGG	TGCTACAGGAATTACAGGTTCAACTGGAGCTACTGGGGCCACA
GGTATCACGGGTGCTACCGGTCCGACTGG	GGCCACGGGTATCACAGGTTCAACCGGTCCGACTGGTGCTACT
GGTATCACAGGTTCAACCGGACCTACTGG	TGCTACTGGTATCACAGGTGCTACCGGAGCTACTGGGGCCACG
GGTATCACAGGTTCAACCGGTCCGACTGG	TGCTACTGGTGCTACAGGAATTACAGGTTCAACCGGATCTACTGGGGCCACA
GGTATCACGGGTGCTACCGGTCCGACTGG	TGCTACAGGTATCACAGGTGCTACCGGTCCGACTGGGGTCACT
GGTAGCACAGGTTCAACTGGAGCTACTGG	GGCCACGGGTATCACAGGTTCAACCGGACCTACTGGTGCTACT
GGTATCACAGGTTCAACCGGACCTACTGG	GGCCACGGGTATCACAGGTTCAACCGGAGCTACTGGTGCCACG
GGTATCACAGGTTCAACCGGAGCTACTGG	TGCCACTGGAATCACGGGTGCAACTGGAGCTACTGGTGCCACG
GGTATCACAGGTTCAACCGGTCCGACTGG	TGCTACTGGTATCACAGGTTCAACCGGTCCGACTGGGGCCACTGGTGTGACG
GGCAGCACTGGACCAACTGGTCCGACTGG	AGCTACGGGAATCACAGGTTCAACCGGTCCGACTGGTGCTACT
GGTATCACAGGTTCAACCGGTCCGACTGG	TGCTACTGGTATCACGGGTGCAACTGGAGCTACTGGTGCTACA
GGAATTACAGGTTCAACCGGTCCGACTGG	TGCTACAGGTATCACAGGTGCTACCGGTCCGACTGGGGTCACT
GGTAGCACAGGTTCAACTGGAGCTACTGG	GGCCACGGGTATCACAGGTTCAACCGGACCTACTGGGGCCACT
GGAATCACGGGTGCAACTGGAGCTACTGG	GGCCACGGGTATCACAGGTTCAACCGGAGCTACTGGTGCTACT
GGTATCACAGGTTCAACCGGAGCTACTGG	GGCCACTGGAATCACGGGTGCAACTGGAGCTACTGGGGCCACG
GGTATCACAGGTTCAACCGGAGCTACTGG	TGCTACTGGTATCACAGGTTCAACCGGATCTACTGGTGCCACG
GGTATCACAGGTTCAACCGGTCCGACTGG	TGCTACAGGAATTACAGGTTCAACTGGAGCTACTGGGGCCACA
GGTATCACAGGTGCAACCGGTCCGACTGG	TGCTACTGGTATCACAGGTTCAACCGGACCTACTGGAGCAACG
GGTATCACGGGTGCTACTGGATCTACTGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011150.1\|WP_017367404.1\|1874864_1875485_+\|membrane-protein	unknown	unknown	gnl\|CDD\|224500
NZ_CP011150.1\|WP_017367402.1\|1872317_1873199_+\|UTP--glucose-1-phosphate-uridylyltransferase-GalU	unknown	unknown	gnl\|CDD\|224131
NZ_CP011150.1\|WP_017358862.1\|1888319_1890731_-\|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|224171
NZ_CP011150.1\|WP_017367412.1\|1895386_1896589_+\|NarK/NasA-family-nitrate-transporter	unknown	unknown	gnl\|CDD\|225133
NZ_CP011150.1\|WP_046343727.1\|1867766_1869254_+\|spore-germination-protein	unknown	unknown	gnl\|CDD\|377020
NZ_CP011150.1\|WP_008346599.1\|1884517_1886002_-\|D-alanyl-D-alanine-carboxypeptidase/D-alanyl-D-alanine-endopeptidase	unknown	unknown	gnl\|CDD\|334815
NZ_CP011150.1\|WP_008346608.1\|1875523_1876543_-\|LLM-class-flavin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|274646
NZ_CP011150.1\|WP_008346595.1\|1887213_1887906_-\|DUF421-domain-containing-protein	unknown	unknown	gnl\|CDD\|225205
NZ_CP011150.1\|WP_008346603.1\|1882505_1883066_-\|CatB-related-O-acetyltransferase	unknown	unknown	gnl\|CDD\|100040
NZ_CP011150.1\|WP_017367401.1\|1871507_1871738_-\|excisionase-family-DNA-binding-protein	unknown	unknown	gnl\|CDD\|200128
NZ_CP011150.1\|WP_046343735.1\|1890820_1892959_-\|nitrate-reductase	unknown	unknown	gnl\|CDD\|239155
NZ_CP011150.1\|WP_017359505.1\|1871893_1872313_+\|GtrA-family-protein	unknown	unknown	gnl\|CDD\|377229
NZ_CP011150.1\|WP_008346597.1\|1886133_1887114_-\|pectinesterase	unknown	unknown	gnl\|CDD\|178372
NZ_CP011150.1\|WP_046343730.1\|1870312_1871464_+\|Ger(x)C-family-spore-germination-protein	unknown	unknown	gnl\|CDD\|274338
NZ_CP011150.1\|WP_017358860.1\|1883130_1884498_-\|MATE-family-efflux-transporter	unknown	unknown	gnl\|CDD\|240543
NZ_CP011150.1\|WP_024719426.1\|1873894_1874716_-\|uroporphyrinogen-III-synthase	unknown	unknown	gnl\|CDD\|235647
NZ_CP011150.1\|WP_007499192.1\|1873252_1873855_+\|DedA-family-protein	unknown	unknown	gnl\|CDD\|223659
NZ_CP011150.1\|WP_046343728.1\|1869266_1870367_+\|GerAB/ArcD/ProY-family-transporter	unknown	unknown	gnl\|CDD\|281794
NZ_CP011150.1\|WP_008346593.1\|1887972_1888296_-\|nitrite-reductase-small-subunit-NirD	unknown	unknown	gnl\|CDD\|239606
NZ_CP011150.1\|WP_046343737.1\|1892955_1895217_-\|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|224171

Protein	Function_ID	Function_description	E-value
NZ_CP011150.1\|WP_017367404.1\|1874864_1875485_+\|membrane-protein	gnl\|CDD\|224500	COG1584, COG1584, Predicted membrane protein [Function unknown].	3.93937e-30
NZ_CP011150.1\|WP_017367402.1\|1872317_1873199_+\|UTP--glucose-1-phosphate-uridylyltransferase-GalU	gnl\|CDD\|224131	COG1210, GalU, UDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane].	7.38176e-158
NZ_CP011150.1\|WP_017358862.1\|1888319_1890731_-\|NAD(P)/FAD-dependent-oxidoreductase	gnl\|CDD\|224171	COG1251, NirB, NAD(P)H-nitrite reductase [Energy production and conversion].	0
NZ_CP011150.1\|WP_017367412.1\|1895386_1896589_+\|NarK/NasA-family-nitrate-transporter	gnl\|CDD\|225133	COG2223, NarK, Nitrate/nitrite transporter [Inorganic ion transport and metabolism].	2.74276e-114
NZ_CP011150.1\|WP_046343727.1\|1867766_1869254_+\|spore-germination-protein	gnl\|CDD\|377020	pfam03323, GerA, Bacillus/Clostridium GerA spore germination protein.	0
NZ_CP011150.1\|WP_008346599.1\|1884517_1886002_-\|D-alanyl-D-alanine-carboxypeptidase/D-alanyl-D-alanine-endopeptidase	gnl\|CDD\|334815	pfam02113, Peptidase_S13, D-Ala-D-Ala carboxypeptidase 3 (S13) family.	1.93272e-133
NZ_CP011150.1\|WP_008346608.1\|1875523_1876543_-\|LLM-class-flavin-dependent-oxidoreductase	gnl\|CDD\|274646	TIGR03558, oxido_grp_1, luciferase family oxidoreductase, group 1. The Pfam domain family pfam00296 is named for luciferase-like monooxygenases, but the family also contains several coenzyme F420-dependent enzymes. This protein family represents a well-resolved clade within family pfam00296 and shows no restriction to coenzyme F420-positive species, unlike some other clades within pfam00296. [Unknown function, Enzymes of unknown specificity].	0
NZ_CP011150.1\|WP_008346595.1\|1887213_1887906_-\|DUF421-domain-containing-protein	gnl\|CDD\|225205	COG2323, COG2323, Predicted membrane protein [Function unknown].	6.62694e-69
NZ_CP011150.1\|WP_008346603.1\|1882505_1883066_-\|CatB-related-O-acetyltransferase	gnl\|CDD\|100040	cd03349, LbH_XAT, Xenobiotic acyltransferase (XAT): The XAT class of hexapeptide acyltransferases is composed of a large number of microbial enzymes that catalyze the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and streptogramin, among others. Members of this class of enzymes include Enterococcus faecium streptogramin A acetyltransferase and Pseudomonas aeruginosa chloramphenicol acetyltransferase. They contain repeated copies of a six-residue hexapeptide repeat sequence motif (X-[STAV]-X-[LIV]-[GAED]-X) and adopt a left-handed parallel beta helix (LbH) structure. The active enzyme is a trimer with CoA and substrate binding sites at the interface of two separate LbH subunits. XATs are implicated in inactivating xenobiotics leading to xenobiotic resistance in patients.	1.97567e-69
NZ_CP011150.1\|WP_017367401.1\|1871507_1871738_-\|excisionase-family-DNA-binding-protein	gnl\|CDD\|200128	TIGR01764, Probable_excisionase, DNA binding domain, excisionase family. An excisionase, or Xis protein, is a small protein that binds and promotes excisive recombination; it is not enzymatically active. This model represents a number of putative excisionases and related proteins from temperate phage, plasmids, and transposons, as well as DNA binding domains of other proteins, such as a DNA modification methylase. This model identifies mostly small proteins and N-terminal regions of large proteins, but some proteins appear to have two copies. This domain appears similar, in both sequence and predicted secondary structure (PSIPRED) to the MerR family of transcriptional regulators (pfam00376). [Unknown function, General].	5.16474e-10
NZ_CP011150.1\|WP_046343735.1\|1890820_1892959_-\|nitrate-reductase	gnl\|CDD\|239155	cd02754, MopB_Nitrate-R-NapA-like, Nitrate reductases, NapA (Nitrate-R-NapA), NasA, and NarB catalyze the reduction of nitrate to nitrite. Monomeric Nas is located in the cytoplasm and participates in nitrogen assimilation. Dimeric Nap is located in the periplasm and is coupled to quinol oxidation via a membrane-anchored tetraheme cytochrome. Members of the MopB_Nitrate-R-NapA CD belong to the molybdopterin_binding (MopB) superfamily of proteins.	0
NZ_CP011150.1\|WP_017359505.1\|1871893_1872313_+\|GtrA-family-protein	gnl\|CDD\|377229	pfam04138, GtrA, GtrA-like protein. Members of this family are predicted to be integral membrane proteins with three or four transmembrane spans. They are involved in the synthesis of cell surface polysaccharides. The GtrA family are a subset of this family. GtrA is predicted to be an integral membrane protein with 4 transmembrane spans. It is involved is in O antigen modification by Shigella flexneri bacteriophage X (SfX), but does not determine the specificity of glucosylation. Its function remains unknown, but it may play a role in translocation of undecaprenyl phosphate linked glucose (UndP-Glc) across the cytoplasmic membrane. Another member of this family is a DTDP-glucose-4-keto-6-deoxy-D-glucose reductase, which catalyzes the conversion of dTDP-4-keto-6-deoxy-D-glucose to dTDP-D-fucose, which is involved in the biosynthesis of the serotype-specific polysaccharide antigen of Actinobacillus actinomycetemcomitans Y4 (serotype b). This family also includes the teichoic acid glycosylation protein, GtcA, which is a serotype-specific protein in some Listeria innocua and monocytogenes strains. Its exact function is not known, but it is essential for decoration of cell wall teichoic acids with glucose and galactose.	3.90553e-22
NZ_CP011150.1\|WP_008346597.1\|1886133_1887114_-\|pectinesterase	gnl\|CDD\|178372	PLN02773, PLN02773, pectinesterase.	6.90351e-86
NZ_CP011150.1\|WP_046343730.1\|1870312_1871464_+\|Ger(x)C-family-spore-germination-protein	gnl\|CDD\|274338	TIGR02887, Spore_germination_protein_B3, germination protein, Ger(x)C family. Members of this protein family are restricted to endospore-forming members of the Firmicutes lineage of bacteria, including the genera Bacillus, Clostridium, Thermoanaerobacter, Carboxydothermus, etc. Members are nearly all predicted lipoproteins and belong to probable transport operons, some of which have been characterized as crucial to germination in response to alanine. Members typically have been gene symbols gerKC, gerAC, gerYC, etc. [Transport and binding proteins, Amino acids, peptides and amines, Cellular processes, Sporulation and germination].	7.74902e-78
NZ_CP011150.1\|WP_017358860.1\|1883130_1884498_-\|MATE-family-efflux-transporter	gnl\|CDD\|240543	cd13138, MATE_yoeA_like, Subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins similar to Bacillus subtilis yoeA. The integral membrane proteins from the MATE family are involved in exporting metabolites across the cell membrane and are responsible for multidrug resistance (MDR) in many bacteria and animals. A number of family members are involved in the synthesis of peptidoglycan components in bacteria.	2.00328e-125
NZ_CP011150.1\|WP_024719426.1\|1873894_1874716_-\|uroporphyrinogen-III-synthase	gnl\|CDD\|235647	PRK05928, hemD, uroporphyrinogen-III synthase; Reviewed.	2.04098e-72
NZ_CP011150.1\|WP_007499192.1\|1873252_1873855_+\|DedA-family-protein	gnl\|CDD\|223659	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown].	3.5708e-41
NZ_CP011150.1\|WP_046343728.1\|1869266_1870367_+\|GerAB/ArcD/ProY-family-transporter	gnl\|CDD\|281794	pfam03845, Spore_permease, Spore germination protein.	1.89805e-55
NZ_CP011150.1\|WP_008346593.1\|1887972_1888296_-\|nitrite-reductase-small-subunit-NirD	gnl\|CDD\|239606	cd03530, Rieske_NirD_small_Bacillus, Small subunit of nitrite reductase (NirD) family, Rieske domain; composed of proteins similar to the Bacillus subtilis small subunit of assimilatory nitrite reductase containing a Rieske domain. The Rieske domain is a [2Fe-2S] cluster binding domain involved in electron transfer. Assimilatory nitrate and nitrite reductases convert nitrate through nitrite to ammonium.	4.82917e-45
NZ_CP011150.1\|WP_046343737.1\|1892955_1895217_-\|NAD(P)/FAD-dependent-oxidoreductase	gnl\|CDD\|224171	COG1251, NirB, NAD(P)H-nitrite reductase [Energy production and conversion].	0

>NZ_CP011150.1|WP_008346608.1|1875523_1876543_-|LLM-class-flavin-dependent-oxidoreductase
MSQSVLQRAAYSVLNLSSVTEGGTIKESFEHSMDLAKKAEKWGYHRYWLAEHHNMEGVASSATSVLIGYIAGGTEKIRVGSGGIMLPNHSSLVIAEQFGTLETLYPGRIDLGLGRAPGTDQLTARALRRNLHNGEDFPEQLEELRQYFKPTGQVKKHVRAVPGEGLDIPIWLLGSSGFSARLAGELGLPFAFAAHFSPKNTIPALELYRQSFQPSDVLKEPYAMVGVTVFAADQTERAEYLATSHYQRFLSLIRNTPGKLKAPVESMDGLWSPYEKAMVDEQLSSTMIGDKQKVKKELEAFIEATQADEVMINSDMFDHQERMRSYEIIAEIFQEEQEK
>NZ_CP011150.1|WP_017367404.1|1874864_1875485_+|membrane-protein
MEKQNVQAIRLSIADPTPLGLFGLAMVTLVASSQKLGITDGTSLILPWAIFLGGIAQLIASIQDSKHHNIFGATAFGAFGLFWMGVGTTWLIQAGVFGKTLAGAADSKQLGFAFIGYLIFSLFMTIGAMETHKVLFLIFVFIDFLFIGLSLSSFGVMYDVTHTMAGIAELIISLLSFYGSAAVVLNTHFGRTVLPVGQPFRVFTKA
>NZ_CP011150.1|WP_024719426.1|1873894_1874716_-|uroporphyrinogen-III-synthase
MSKGLAGKTIAICGTRKTEEMRTLVEKQGGQAVIRSLQGTVFLAKEELKPGIETFVKKGADWVILTTGIGTDTLIESAEELQLGEAFMNILSSAHIASRGYKTFAALKKHGIQPDVSDEDGTVRDLISKLEDKELQGKRVMVQLHGENAPALIDFLHHKGADVLQLMPYQHTPPEPEAADTLLQEMKEGKVHAVCFTTAVQVHAFFKLAEEWGKKEELQHLFEQHVLAVAVGKVTAEALKEEGISRILAPSLERMGAMIMELSQYMKKQSTHA
>NZ_CP011150.1|WP_007499192.1|1873252_1873855_+|DedA-family-protein
MGTLFNEILTWLTSLGYAGVALGLMIEIIPSEIVLAYGGYMVSTGSIGFVGAVIAGVIGGTLAQCFIYWIGLYGGRPFLTKYGKYLFIHEHHIATAERWFDRYGTGVVFTARFIPVVRHAISIPAGIAKMPFLKFVLLTGLAAIPWSILFIYLGMQLGTKWDHIQSVAHTYTTPIMVIAIVLIVLYFVLKKIRTNRKRTI
>NZ_CP011150.1|WP_017367402.1|1872317_1873199_+|UTP--glucose-1-phosphate-uridylyltransferase-GalU
MNIKKAVIPAAGLGTRFLPATKAQPKEMLPIIDKPAIQYIVEEAVQSGIEDILIITGRNKKSIEDHFDRSIELEHTLLEKGKNEQLAEIKHIADMANIHYIRQKEPLGLGHAVLCARHFTGNDPFAVLLGDDVMVSERPALSQLMEVFEDKQREVIGVQQVDRLDVSKYGMIRPARVDGQVFEVTDLVEKPAIHEAPSDFAVMGRYLLTPSIFPILQGIERGAGNEIQLTDALKIIAHESPIYAKQLDGMRFDVGDKLGSFKAAAEIGLMRHDMRTAMLAYMQSILMREAKQA
>NZ_CP011150.1|WP_017359505.1|1871893_1872313_+|GtrA-family-protein
MILRMTKKNIRTYAAFLTVGASNTMIDFLFFFFLTACFVPSFLAQCLSYTAGMLNSYVWNRKWTFQVKKKADKWEWIKWATVNGAACLLTYVVLYVMQQAGFSLFISKAIGTLLGMMITFTGSRLWVFPSENKPSEMER
>NZ_CP011150.1|WP_017367401.1|1871507_1871738_-|excisionase-family-DNA-binding-protein
MYLTIGETAEYLEVSEAYVEKLIQQKKIRYVFDGKSYLIYQGQFQTHMKQLEQYKELIQDILNEPIPEDPDVKDED
>NZ_CP011150.1|WP_046343730.1|1870312_1871464_+|Ger(x)C-family-spore-germination-protein
MYDHWAAAEKKVGEKTRMKHYILVCLMLLSLFLTSCAQPRLLDELSISQAAGFDLLDDGEMKGFFVFPVFKSEEQGSYQIVSAKSNTISNIQFLVSEKSPFPVVMGQVLVILISEKLAKEVGMIDLMNYIYRDPIIGSRQVFAIVGGEVEDLLYTKMNQTNLNIGVYLSDLLAQNMRNGNQPVTNQHIFMNQMMAKGVDAYLPYIKNTSNSIKVSGVALFDQEKMVGHIPGEDTFTFKAMIETHKNGIYEFRFNDTKKTHVVIENIKSHVSYHIKPTENLSKKPHITIDIKLKGELKEFMKSKKIDTPSILQHVEKEVEERVAQQGKDLVQSFKKQKIDPLGLGLRYRSKDKAMTPEKWQKLYPDTDVQVNCHMNIVQTGVSQ
>NZ_CP011150.1|WP_046343728.1|1869266_1870367_+|GerAB/ArcD/ProY-family-transporter
MSSSSVKEKFQVSPFFVFFLINANQVGVGILNFQTNLVRTINNDGWIAILIAGASVNLMIFLIYFLFKKAPSDEFSDITQSVFGKWLGQFINILYILYFSSLSLIVLVHYMDVIHVWLFKEIPGLLFASVLLILVYYIHTGGFRTIAGWAFFSIVLTYWMTFICFYVMKYSHIRFMFPMFDHSFSQLMMGVKDASLSMFGFGTLLVYYPFIKKAQTSQKFAHMGVLLTTCLNLLVFLVSIAYYSSAQLKLTKWPTLTLTSIVKLPFIQRFEFIEVSLWLLLIVPNIAIPLWAASRMAKQVFHTSQRMTLIVLSLLILVMFSFLIEATSFETFNKWVEYSGYILIYGLTGCMIIGLLLKKRWVKKRA
>NZ_CP011150.1|WP_046343727.1|1867766_1869254_+|spore-germination-protein
MLKKNKSKQKDPNSVFEALSRSSDFINELSSSGGFLYRISFFRSLINGNLLHEQILPFIQQLHLTPTLEELKEHIPIEQAVITKDLQKVEEALHRGSIAVRIETDWGNTLLLPIEEKKGRQVGPPEIEFGIISAQEAFVEVLDTNLNLLRRRLPTPDLKVVEHTVGTLSLTKVAVVYIENIANPQNIETVLQRIQDVDYDQILDSNYLAQMLYDVSNTIFPLFLNTERPDRVSSGLTEGKIAIMVDGSPHTLLAPTILLEYFSTMEDYNMSWIAASSFRLLRIFAVIFSIFATPLYVAVLTFHYELIPKDLLETIVASRYLVPFPPIIEALFLEISIELLREAGSRLPAKVGQTLGIVGGIVIGQAAVAAGLTSNILLIIVALSALASFVTPIYKMGTTIRLLRFPFLFAAQVWGALGISLMGAFLLTHLMKLTSIGQPYLEPIFPLRLADLKGSLIRPQLRFLKKRPENLRPQNETIHRQKPKQGRKGKNDFYE
>NZ_CP011150.1|WP_008346603.1|1882505_1883066_-|CatB-related-O-acetyltransferase
MFLNQRSELSSYDIGDFTYAGPDFQVLTWGEGTTLNVGKFCSIANEVKVFLGGEHRTDWVTTYPFNQIFTDAAHIKGHPRSKGDVCIGHDVWIGYGATIMSGVQIGNGAVIGANSLITKDVPPYAIVAGNPQRLMKYRFSSDIIEKLQLLEWWNLEFSFIQSIFHLLQSPDIDHCISVIEDRKKKG
>NZ_CP011150.1|WP_017358860.1|1883130_1884498_-|MATE-family-efflux-transporter
MTLDNNQSLVKTMSIFLIPLLLSNILQSIGQLVSIVLVGRWIGEDAVAAISAFFPLFFLLVSFSIGIGSGSSILIGQAYGAKNEQRLKEIIGTTLSFTFLIGLSLAVIGGFFATDILHLMGTPANIVEESAAYARILFISMPILFLYFVYTTFLRGTGDSKTPFYFLMISTGTNILLLPILLFGWLGLPAFGLYGAAYSSVISTIVTFIILHIYLYKTKHPLRIDASVRKHLLMKGDLLKTLLKLSIPSSINMILISLSEIAVISFVNDYGSQATAAYGVVNQVVSYVQMPAVSLGIAVSIFAAQFIGAGNMNRLKDVIKIGLGLNFAIGGLIIIFVYIFAPQILSIFLTDPATIDVAYSLVVITLWSYLIFGTAQIVAATMRASGTVLWPTIFSICSIWLVEVPVAYVLSHHTSLGIKGIWIGYPAAFFVNLLLQYGYYRLVWKKKQIVALVQS
>NZ_CP011150.1|WP_008346599.1|1884517_1886002_-|D-alanyl-D-alanine-carboxypeptidase/D-alanyl-D-alanine-endopeptidase
MKRFSQVMFLQLCILSMLFLPFSVKDEQLTAHDDQSKWITSLDEFIRTAPDLEGAIAGISVRDTSDTSLLYEHQADIRLTPASNMKLLTSAIALDLLGETHTFPTDVWIDGSIHKKTLHGNLYLRGSGDPTLLESDFAALAKQVKKAGIHTIRGQLAADDTWFDDTRYSIDLPWSDEDQYYGAQISALTASPNEDYDAGTIILEVKPGKKAGQKASYEMIPKTDVAQVVNQVKTVPEGGKKKISFKRSHGTNKITLTGTIPLKASSSKQWVALWEPTTYALDLMKRALKAEGIQLKGPLKTKQVPKKAKKIASHTSMPLSDLLVPMMKLSNNTHAEILLKELGKRVKNKGSFDKGLDVLNERLPAYGIDASMTVLRDGSGISPINLVSANQFTLFLTNIQKEKWFNTYVHALPLAGASERMVGGTLRNRLKEPATLEKVRAKTGTLSTVSTLSGYIETQSGKTLAFSILLNHLVDDEKGKEIEDRIVSMLAEDL
>NZ_CP011150.1|WP_008346597.1|1886133_1887114_-|pectinesterase
MKYGKRLLMMVLALLLFDSAYAQAAGHNHQTNRVLIVDQKGNGTFRTVQSAIDAIPVNNQQQTTIYIKNGVYKEKILLPQNKPYVSFIGENQYQTILTYDDTNASSGSTTNSSSTMIRANHFYAENITFQNTAGRNAGQAVALYVSGDRAVFKHVRVLGYQDTLYATGTGRQYYEDCYIEGTVDFIFGSATAVFKRAEIKSLGNGYITAASTTEAQKYGYVFIDSTLNKGTSASQSVYLGRPWRPHSAVTFLQTKMDEHIKAEGWHNWENKDNERTARYQEYGSTGAGSHVANRVKWSTILTKNEASQITVQAVLSGSDGWNPEKR
>NZ_CP011150.1|WP_008346595.1|1887213_1887906_-|DUF421-domain-containing-protein
MPFFNILIELFIGFFALFSITKLLGKTQFAQITPFDFISALILGEMVGNAIFDPEVSVLHILFAVAVWGVLIYTVEWLSQKFKSIRAFLEGRPTLVIDKGKIHYNRLKKNMLDLNQLQTLIRAKGHFALNEIEFAILETDGSVSVLPKMKYAPATAEDVNVKGKEVTLPRTFIIDGEILKKDLKEAGFDEAWLREQLKKQHISSYKDVLFCEWIENEGIYAMKYEKTSTT
>NZ_CP011150.1|WP_008346593.1|1887972_1888296_-|nitrite-reductase-small-subunit-NirD
MTVSIVKVHIGTISDFPLQLGKTVAAGPLELAVFQTSNKQFKAIENRCPHKGGVLAEGMVSGDHVFCPMHDWKINLSSGNVQEPDHGCVKTYEALVEGDDVFILLPS
>NZ_CP011150.1|WP_017358862.1|1888319_1890731_-|NAD(P)/FAD-dependent-oxidoreductase
MKEKLVLVGNGMAGIRTLENILKTDNERFDMTVFGTEPYPNYNRILLSKVLQGDTKTEDITLNDWNWYKEHHIQLFTNETIVKIDPDNQTVMSDQGRTVHYDRLILATGSLPFIPPIPGSDKKGVTAFRTLQDTEEMVKASMMYKKAAVIGGGLLGLEAARGLLNLGMEVTVIHLGSHLMDRQLDPVAGQLLQAALEKQGMSFLLGKQTNEILGDTRVEGLTFSDGSTLETDMVVMAAGIKPNHKLAETSGIEVNRGIIVNDFMETSVPRIYAVGECVEHRGQTYGLVAPLYDQANVLAKHVCDMAPTPYEGSVLSTQLKVSGVDVFSAGDFIENDEKKAIKIFDEQQGIYQKLVFQQNRLVGAVMFGETSDGPRLFSYIREGVDMSDMEKVSVLTSNELAQENTIEQMANDHIVCGCNGVSKGQIVAAIQKEGLTTIQEVKQCTSASRSCGGCQPVVEEILWHTLGDDANRTAQKETICACTTLSRDEVIHEIKEKGLQHVKEVMNVLDWETEEGCSKCRPALNYYLGMMYPLDYKDEKSSRFVNERMHANIQNDGTYSVVPRMYGGVTNANDLRKIADVVDKYEIPLVKMTGGQRIDLLGVKKEDLPKVWADLDMPSGYAYGKSLRTVKTCVGEQFCRFGTQDSISLGIALEKKFEGLATPHKVKMAVSACPRNCAESGIKDLGIVGIDGGFELYAGGNGGTHLRAGDLLMKVSTAEEVEQMAAAYLQYYRETANYLERTSAWVERLGLNHIQTVLLDDKKRAALIERMDIALSTYEEPWQEIRENETETRQLFQKATASV
>NZ_CP011150.1|WP_046343735.1|1890820_1892959_-|nitrate-reductase
MNQSFLQYVQQTSEQQERKRVFPSQCPFCSMQCKMQLVEQHAEGRTRYQTIGIHNPTTFGRICMKGQHAHQHALHKERLNHPLIKRNGQFVKVTWQEALDEIKARTQTLQTEHGNDAISVYGSASITNEEAYLLGKFARVALKTKYIDYNGRLCMSSAATAANQTFGLDRGLTFPLRDIKHARVLLLVGTNIAECQPTLIPYLEEAKKNGAFLIVIDPRKTATAKLADLHVSLRPGSDAALANGILHVMLHEQLLDEEFIKKRTSGFQEMKQHISHMSLQDITQQTGVSMKVIQKIARKFAREKTGMILTARGIEQQIDGTASVRNFLNILLVTGKIGRIGCGYGAITGQGNGQGAREHGQKADQLPGYRDITNPVHRKEMAEIWKIDEKELPGKGVSAFEMFEKMQKGEIKALFLMCSNPVQSGPHASFIKKAIEQLSFFVAIDLFISETAALADVILPASSYLEDEGTMTNIEGRVTLREATYPLKHQRKHDWQIICDIAAVLGKGGSFSFSSAEDIFEELRTATKGAKADYSGMTYDRLRKTQGILWPCSHLEDRGTERLFEHQFSHPDKLAKFAVVAHGQQGAKEPVSPEYPLYLTTGRVMAHYQTGVQTRKSTSLVARQFEAYVELHPDTAEAYGIQHGELVTIQSKRGSVIMRCHITDTTRKDTVFVPFHWNKHQSINLLIGKQLDPHSKMPGFKYCPVQLSAYKN
>NZ_CP011150.1|WP_046343737.1|1892955_1895217_-|NAD(P)/FAD-dependent-oxidoreductase
MAKRKLVFIGNGMASMKCIEHIVKNQPERYSITIIGKEKHPAYNRIKLSSVLQKSESLSQIELKPKEWYTKHDITIQTGEAVVHIDTKRQLLMTEARRNIPYDKLVIATGSSPHFLPIQGVSKKGVYAFRTIDDYEAIYADSLRYERAAVIGGGVLGVEVAAGLQIAGLKTTLIHHTDWLMQRQLDETAAGLLSQQLSRKGIQVKTNAHTIACLGNERVEGVLLKSGDIVDADLVVFTTGVRPNIELAKQHGIHTRKAIVVNDVMQTNVENIYAIGECAEHKGMVHGLVQPIYEQANVLANHLLDELVTNLPPAIYSTKLKANDISIYSAGSIVNRSPSASVVTYLDEEQEVYKKLVFEHDVLTGVVLVGQLERAEQLLQDVKVGRDKSVVMKSLNEEQISPLDSLKTEDLICQCHTVTKGAIFKSISFHQLTNLEEIKKQTGAATGCGGCQELVRACCHVSSNQLTEALDTFCSCTNVEEETIFSYVKKQQPLNEEQVRRQFDWMTDNGCDKCRAAIPYYLEQFQDLFVKDSPSDHEHILMPQLYGGRLDLTFLQMITGLLEQKQIQHVELTENKRIRLIGISQEADHIVKEHGHIMPQESKRLSHVLSCDCRHDPSVTTLVMEIERQLENTLLPAVTSIHIAGPSCVCHFSPIYDICIKKQLDEWDIYIGGSIRQPKAGQLFYSVSRTDELIPFLKALLEDYRKRAYFQESIGDWIQKNGIISIREKLLDEEMREELCEQFEQSRQKGVNV
>NZ_CP011150.1|WP_017367412.1|1895386_1896589_+|NarK/NasA-family-nitrate-transporter
MKLSELTSSGHPKTLFGSFLYFDVSFMIWVLLGALGAFIAQDFALSTIEKGMIVAIPILSGSFFRIVLGLLTDRMGPKKTAMMGMILTTIPLIWGFFGGTTLSELVLIGILLGVAGASFAVALPMASRWYPPHLQGVAMGIAGAGNSGTLISTLFGPRLAEMYGWHTVMGLALIPLSFVFLFFIFTAKDAPNQPAPQPLRSYFSVFKVKTTWFFCLLYAITFGGFVGLSSFLSIFFVDQYAISKIHAGDFVTLCVAAGSFFRPVGGLIADKIGGMKVLLGLFALIGICLGAVSSLPALPVVIALLFVGMMCLGMGNGAVFQLVPQVFHKEIGIVTGIVGAAGGIGGFFLPNVLGSLKEMTGSYTFGFLTISLFVLAVFLCLVVSQFKRKKVIIQPTMSES

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP011150_1	1.2\|1879147\|43\|NZ_CP011150\|CRT	1879147-1879189	43	NZ_CP011150.1	1877761-1877803	0	1.0
NZ_CP011150_1	1.8\|1879588\|52\|NZ_CP011150\|CRT	1879588-1879639	52	NZ_CP011150.1	1878202-1878253	0	1.0
NZ_CP011150_1	1.9\|1879669\|43\|NZ_CP011150\|CRT	1879669-1879711	43	NZ_CP011150.1	1878283-1878325	0	1.0
NZ_CP011150_1	1.14\|1880038\|52\|NZ_CP011150\|CRT	1880038-1880089	52	NZ_CP011150.1	1878166-1878217	0	1.0
NZ_CP011150_1	1.20\|1880479\|43\|NZ_CP011150\|CRT	1880479-1880521	43	NZ_CP011150.1	1877653-1877695	0	1.0
NZ_CP011150_1	1.20\|1880479\|43\|NZ_CP011150\|CRT	1880479-1880521	43	NZ_CP011150.1	1879039-1879081	0	1.0
NZ_CP011150_1	1.21\|1880551\|43\|NZ_CP011150\|CRT	1880551-1880593	43	NZ_CP011150.1	1878355-1878397	0	1.0
NZ_CP011150_1	1.23\|1880695\|52\|NZ_CP011150\|CRT	1880695-1880746	52	NZ_CP011150.1	1877941-1877992	0	1.0
NZ_CP011150_1	1.25\|1880848\|43\|NZ_CP011150\|CRT	1880848-1880890	43	NZ_CP011150.1	1878058-1878100	0	1.0
NZ_CP011150_1	1.27\|1880992\|43\|NZ_CP011150\|CRT	1880992-1881034	43	NZ_CP011150.1	1877581-1877623	0	1.0
NZ_CP011150_1	1.36\|1881649\|43\|NZ_CP011150\|CRT	1881649-1881691	43	NZ_CP011150.1	1877653-1877695	0	1.0
NZ_CP011150_1	1.36\|1881649\|43\|NZ_CP011150\|CRT	1881649-1881691	43	NZ_CP011150.1	1879039-1879081	0	1.0
NZ_CP011150_1	1.1\|1879075\|43\|NZ_CP011150\|CRT	1879075-1879117	43	NZ_CP011150.1	1877689-1877731	1	0.977
NZ_CP011150_1	1.1\|1879075\|43\|NZ_CP011150\|CRT	1879075-1879117	43	NZ_CP011150.1	1878967-1879009	1	0.977
NZ_CP011150_1	1.3\|1879219\|43\|NZ_CP011150\|CRT	1879219-1879261	43	NZ_CP011150.1	1878391-1878433	1	0.977
NZ_CP011150_1	1.17\|1880263\|43\|NZ_CP011150\|CRT	1880263-1880305	43	NZ_CP011150.1	1878391-1878433	1	0.977
NZ_CP011150_1	1.21\|1880551\|43\|NZ_CP011150\|CRT	1880551-1880593	43	NZ_CP011150.1	1878130-1878172	1	0.977
NZ_CP011150_1	1.24\|1880776\|43\|NZ_CP011150\|CRT	1880776-1880818	43	NZ_CP011150.1	1878391-1878433	1	0.977
NZ_CP011150_1	1.26\|1880920\|43\|NZ_CP011150\|CRT	1880920-1880962	43	NZ_CP011150.1	1878022-1878064	1	0.977
NZ_CP011150_1	1.27\|1880992\|43\|NZ_CP011150\|CRT	1880992-1881034	43	NZ_CP011150.1	1878571-1878613	1	0.977
NZ_CP011150_1	1.31\|1881289\|43\|NZ_CP011150\|CRT	1881289-1881331	43	NZ_CP011150.1	1878391-1878433	1	0.977
NZ_CP011150_1	1.32\|1881361\|43\|NZ_CP011150\|CRT	1881361-1881403	43	NZ_CP011150.1	1878751-1878793	1	0.977
NZ_CP011150_1	1.33\|1881433\|43\|NZ_CP011150\|CRT	1881433-1881475	43	NZ_CP011150.1	1877545-1877587	1	0.977
NZ_CP011150_1	1.33\|1881433\|43\|NZ_CP011150\|CRT	1881433-1881475	43	NZ_CP011150.1	1878058-1878100	1	0.977
NZ_CP011150_1	1.33\|1881433\|43\|NZ_CP011150\|CRT	1881433-1881475	43	NZ_CP011150.1	1878535-1878577	1	0.977
NZ_CP011150_1	1.35\|1881577\|43\|NZ_CP011150\|CRT	1881577-1881619	43	NZ_CP011150.1	1878094-1878136	1	0.977
NZ_CP011150_1	1.6\|1879444\|43\|NZ_CP011150\|CRT	1879444-1879486	43	NZ_CP011150.1	1877617-1877659	2	0.953
NZ_CP011150_1	1.6\|1879444\|43\|NZ_CP011150\|CRT	1879444-1879486	43	NZ_CP011150.1	1877761-1877803	2	0.953
NZ_CP011150_1	1.6\|1879444\|43\|NZ_CP011150\|CRT	1879444-1879486	43	NZ_CP011150.1	1879003-1879045	2	0.953
NZ_CP011150_1	1.6\|1879444\|43\|NZ_CP011150\|CRT	1879444-1879486	43	NZ_CP011150.1	1881901-1881943	2	0.953
NZ_CP011150_1	1.9\|1879669\|43\|NZ_CP011150\|CRT	1879669-1879711	43	NZ_CP011150.1	1877725-1877767	2	0.953
NZ_CP011150_1	1.9\|1879669\|43\|NZ_CP011150\|CRT	1879669-1879711	43	NZ_CP011150.1	1878463-1878505	2	0.953
NZ_CP011150_1	1.10\|1879741\|43\|NZ_CP011150\|CRT	1879741-1879783	43	NZ_CP011150.1	1878283-1878325	2	0.953
NZ_CP011150_1	1.11\|1879813\|43\|NZ_CP011150\|CRT	1879813-1879855	43	NZ_CP011150.1	1878787-1878829	2	0.953
NZ_CP011150_1	1.13\|1879966\|43\|NZ_CP011150\|CRT	1879966-1880008	43	NZ_CP011150.1	1878787-1878829	2	0.953
NZ_CP011150_1	1.14\|1880038\|52\|NZ_CP011150\|CRT	1880038-1880089	52	NZ_CP011150.1	1878931-1878982	2	0.962
NZ_CP011150_1	1.19\|1880407\|43\|NZ_CP011150\|CRT	1880407-1880449	43	NZ_CP011150.1	1877509-1877551	2	0.953
NZ_CP011150_1	1.19\|1880407\|43\|NZ_CP011150\|CRT	1880407-1880449	43	NZ_CP011150.1	1878022-1878064	2	0.953
NZ_CP011150_1	1.20\|1880479\|43\|NZ_CP011150\|CRT	1880479-1880521	43	NZ_CP011150.1	1877950-1877992	2	0.953
NZ_CP011150_1	1.21\|1880551\|43\|NZ_CP011150\|CRT	1880551-1880593	43	NZ_CP011150.1	1878058-1878100	2	0.953
NZ_CP011150_1	1.25\|1880848\|43\|NZ_CP011150\|CRT	1880848-1880890	43	NZ_CP011150.1	1877545-1877587	2	0.953
NZ_CP011150_1	1.25\|1880848\|43\|NZ_CP011150\|CRT	1880848-1880890	43	NZ_CP011150.1	1878355-1878397	2	0.953
NZ_CP011150_1	1.25\|1880848\|43\|NZ_CP011150\|CRT	1880848-1880890	43	NZ_CP011150.1	1878535-1878577	2	0.953
NZ_CP011150_1	1.26\|1880920\|43\|NZ_CP011150\|CRT	1880920-1880962	43	NZ_CP011150.1	1877509-1877551	2	0.953
NZ_CP011150_1	1.28\|1881064\|52\|NZ_CP011150\|CRT	1881064-1881115	52	NZ_CP011150.1	1878166-1878217	2	0.962
NZ_CP011150_1	1.32\|1881361\|43\|NZ_CP011150\|CRT	1881361-1881403	43	NZ_CP011150.1	1877545-1877587	2	0.953
NZ_CP011150_1	1.32\|1881361\|43\|NZ_CP011150\|CRT	1881361-1881403	43	NZ_CP011150.1	1878058-1878100	2	0.953
NZ_CP011150_1	1.32\|1881361\|43\|NZ_CP011150\|CRT	1881361-1881403	43	NZ_CP011150.1	1878535-1878577	2	0.953
NZ_CP011150_1	1.33\|1881433\|43\|NZ_CP011150\|CRT	1881433-1881475	43	NZ_CP011150.1	1878751-1878793	2	0.953
NZ_CP011150_1	1.34\|1881505\|43\|NZ_CP011150\|CRT	1881505-1881547	43	NZ_CP011150.1	1877986-1878028	2	0.953
NZ_CP011150_1	1.35\|1881577\|43\|NZ_CP011150\|CRT	1881577-1881619	43	NZ_CP011150.1	1878319-1878361	2	0.953
NZ_CP011150_1	1.35\|1881577\|43\|NZ_CP011150\|CRT	1881577-1881619	43	NZ_CP011150.1	1878499-1878541	2	0.953
NZ_CP011150_1	1.35\|1881577\|43\|NZ_CP011150\|CRT	1881577-1881619	43	NZ_CP011150.1	1878715-1878757	2	0.953
NZ_CP011150_1	1.36\|1881649\|43\|NZ_CP011150\|CRT	1881649-1881691	43	NZ_CP011150.1	1877950-1877992	2	0.953
NZ_CP011150_1	1.37\|1881721\|43\|NZ_CP011150\|CRT	1881721-1881763	43	NZ_CP011150.1	1878319-1878361	2	0.953
NZ_CP011150_1	1.37\|1881721\|43\|NZ_CP011150\|CRT	1881721-1881763	43	NZ_CP011150.1	1878499-1878541	2	0.953
NZ_CP011150_1	1.37\|1881721\|43\|NZ_CP011150\|CRT	1881721-1881763	43	NZ_CP011150.1	1878715-1878757	2	0.953

1. spacer 1.2|1879147|43|NZ_CP011150|CRT matches to position: 1877761-1877803, mismatch: 0, identity: 1.0

tgctactggtatcacaggttcaaccggacctactggtgctaca	CRISPR spacer
tgctactggtatcacaggttcaaccggacctactggtgctaca	Protospacer
*******************************************

2. spacer 1.8|1879588|52|NZ_CP011150|CRT matches to position: 1878202-1878253, mismatch: 0, identity: 1.0

ggccactggtgtgacgggcagcactggaccaactggtccgactggagctacg	CRISPR spacer
ggccactggtgtgacgggcagcactggaccaactggtccgactggagctacg	Protospacer
****************************************************

3. spacer 1.9|1879669|43|NZ_CP011150|CRT matches to position: 1878283-1878325, mismatch: 0, identity: 1.0

tgctacaggtatcacaggttcaaccggtccgactggtgctact	CRISPR spacer
tgctacaggtatcacaggttcaaccggtccgactggtgctact	Protospacer
*******************************************

4. spacer 1.14|1880038|52|NZ_CP011150|CRT matches to position: 1878166-1878217, mismatch: 0, identity: 1.0

tgctactggtatcacaggttcaaccggacctactggggccactggtgtgacg	CRISPR spacer
tgctactggtatcacaggttcaaccggacctactggggccactggtgtgacg	Protospacer
****************************************************

5. spacer 1.20|1880479|43|NZ_CP011150|CRT matches to position: 1877653-1877695, mismatch: 0, identity: 1.0

tgctacaggaattacaggttcaactggagctactggggccaca	CRISPR spacer
tgctacaggaattacaggttcaactggagctactggggccaca	Protospacer
*******************************************

6. spacer 1.20|1880479|43|NZ_CP011150|CRT matches to position: 1879039-1879081, mismatch: 0, identity: 1.0

tgctacaggaattacaggttcaactggagctactggggccaca	CRISPR spacer
tgctacaggaattacaggttcaactggagctactggggccaca	Protospacer
*******************************************

7. spacer 1.21|1880551|43|NZ_CP011150|CRT matches to position: 1878355-1878397, mismatch: 0, identity: 1.0

ggccacgggtatcacaggttcaaccggtccgactggtgctact	CRISPR spacer
ggccacgggtatcacaggttcaaccggtccgactggtgctact	Protospacer
*******************************************

8. spacer 1.23|1880695|52|NZ_CP011150|CRT matches to position: 1877941-1877992, mismatch: 0, identity: 1.0

tgctactggtgctacaggaattacaggttcaaccggatctactggggccaca	CRISPR spacer
tgctactggtgctacaggaattacaggttcaaccggatctactggggccaca	Protospacer
****************************************************

9. spacer 1.25|1880848|43|NZ_CP011150|CRT matches to position: 1878058-1878100, mismatch: 0, identity: 1.0

ggccacgggtatcacaggttcaaccggacctactggtgctact	CRISPR spacer
ggccacgggtatcacaggttcaaccggacctactggtgctact	Protospacer
*******************************************

10. spacer 1.27|1880992|43|NZ_CP011150|CRT matches to position: 1877581-1877623, mismatch: 0, identity: 1.0

tgccactggaatcacgggtgcaactggagctactggtgccacg	CRISPR spacer
tgccactggaatcacgggtgcaactggagctactggtgccacg	Protospacer
*******************************************

11. spacer 1.36|1881649|43|NZ_CP011150|CRT matches to position: 1877653-1877695, mismatch: 0, identity: 1.0

tgctacaggaattacaggttcaactggagctactggggccaca	CRISPR spacer
tgctacaggaattacaggttcaactggagctactggggccaca	Protospacer
*******************************************

12. spacer 1.36|1881649|43|NZ_CP011150|CRT matches to position: 1879039-1879081, mismatch: 0, identity: 1.0

tgctacaggaattacaggttcaactggagctactggggccaca	CRISPR spacer
tgctacaggaattacaggttcaactggagctactggggccaca	Protospacer
*******************************************

13. spacer 1.1|1879075|43|NZ_CP011150|CRT matches to position: 1877689-1877731, mismatch: 1, identity: 0.977

ggccacaggtatcacgggtgctaccggtccgactggtgccacg	CRISPR spacer
ggccacaggtatcacgggtgctaccggcccgactggtgccacg	Protospacer
***************************.***************

14. spacer 1.1|1879075|43|NZ_CP011150|CRT matches to position: 1878967-1879009, mismatch: 1, identity: 0.977

ggccacaggtatcacgggtgctaccggtccgactggtgccacg	CRISPR spacer
ggccactggtatcacgggtgctaccggtccgactggtgccacg	Protospacer
****** ************************************

15. spacer 1.3|1879219|43|NZ_CP011150|CRT matches to position: 1878391-1878433, mismatch: 1, identity: 0.977

tgctacaggtatcacaggtgctaccggtccgactggggtcact	CRISPR spacer
tgctactggtatcacaggtgctaccggtccgactggggtcact	Protospacer
****** ************************************

16. spacer 1.17|1880263|43|NZ_CP011150|CRT matches to position: 1878391-1878433, mismatch: 1, identity: 0.977

tgctacaggtatcacaggtgctaccggtccgactggggtcact	CRISPR spacer
tgctactggtatcacaggtgctaccggtccgactggggtcact	Protospacer
****** ************************************

17. spacer 1.21|1880551|43|NZ_CP011150|CRT matches to position: 1878130-1878172, mismatch: 1, identity: 0.977

ggccacgggtatcacaggttcaaccggtccgactggtgctact	CRISPR spacer
ggccacgggtatcacaggtgcaaccggtccgactggtgctact	Protospacer
******************* ***********************

18. spacer 1.24|1880776|43|NZ_CP011150|CRT matches to position: 1878391-1878433, mismatch: 1, identity: 0.977

tgctacaggtatcacaggtgctaccggtccgactggggtcact	CRISPR spacer
tgctactggtatcacaggtgctaccggtccgactggggtcact	Protospacer
****** ************************************

19. spacer 1.26|1880920|43|NZ_CP011150|CRT matches to position: 1878022-1878064, mismatch: 1, identity: 0.977

ggccacgggtatcacaggttcaaccggagctactggtgccacg	CRISPR spacer
ggccacgggtatcacaggttcaaccggagctactggggccacg	Protospacer
************************************ ******

20. spacer 1.27|1880992|43|NZ_CP011150|CRT matches to position: 1878571-1878613, mismatch: 1, identity: 0.977

tgccactggaatcacgggtgcaactggagctactggtgccacg	CRISPR spacer
tgccactggaatcacgggtgcaactggagctactggggccacg	Protospacer
************************************ ******

21. spacer 1.31|1881289|43|NZ_CP011150|CRT matches to position: 1878391-1878433, mismatch: 1, identity: 0.977

tgctacaggtatcacaggtgctaccggtccgactggggtcact	CRISPR spacer
tgctactggtatcacaggtgctaccggtccgactggggtcact	Protospacer
****** ************************************

22. spacer 1.32|1881361|43|NZ_CP011150|CRT matches to position: 1878751-1878793, mismatch: 1, identity: 0.977

ggccacgggtatcacaggttcaaccggacctactggggccact	CRISPR spacer
ggccacgggtatcacaggttcaaccggagctactggggccact	Protospacer
**************************** **************

23. spacer 1.33|1881433|43|NZ_CP011150|CRT matches to position: 1877545-1877587, mismatch: 1, identity: 0.977

ggccacgggtatcacaggttcaaccggagctactggtgctact	CRISPR spacer
ggccacgggtatcacaggttcaaccggagctactggtgccact	Protospacer
***************************************.***

24. spacer 1.33|1881433|43|NZ_CP011150|CRT matches to position: 1878058-1878100, mismatch: 1, identity: 0.977

ggccacgggtatcacaggttcaaccggagctactggtgctact	CRISPR spacer
ggccacgggtatcacaggttcaaccggacctactggtgctact	Protospacer
**************************** **************

25. spacer 1.33|1881433|43|NZ_CP011150|CRT matches to position: 1878535-1878577, mismatch: 1, identity: 0.977

ggccacgggtatcacaggttcaaccggagctactggtgctact	CRISPR spacer
ggccacgggtatcacaggttcaaccggagctactggtgccact	Protospacer
***************************************.***

26. spacer 1.35|1881577|43|NZ_CP011150|CRT matches to position: 1878094-1878136, mismatch: 1, identity: 0.977

tgctactggtatcacaggttcaaccggatctactggtgccacg	CRISPR spacer
tgctactggtatcacaggttcaaccggatctactggggccacg	Protospacer
************************************ ******

27. spacer 1.6|1879444|43|NZ_CP011150|CRT matches to position: 1877617-1877659, mismatch: 2, identity: 0.953

tgccacgggtatcacaggttcaaccggacctactggtgctaca	CRISPR spacer
tgccacgggtatcacaggttcaaccggtccgactggtgctaca	Protospacer
*************************** ** ************

28. spacer 1.6|1879444|43|NZ_CP011150|CRT matches to position: 1877761-1877803, mismatch: 2, identity: 0.953

tgccacgggtatcacaggttcaaccggacctactggtgctaca	CRISPR spacer
tgctactggtatcacaggttcaaccggacctactggtgctaca	Protospacer
***.** ************************************

29. spacer 1.6|1879444|43|NZ_CP011150|CRT matches to position: 1879003-1879045, mismatch: 2, identity: 0.953

tgccacgggtatcacaggttcaaccggacctactggtgctaca	CRISPR spacer
tgccacgggtatcacaggttcaaccggtccgactggtgctaca	Protospacer
*************************** ** ************

30. spacer 1.6|1879444|43|NZ_CP011150|CRT matches to position: 1881901-1881943, mismatch: 2, identity: 0.953

tgccacgggtatcacaggttcaaccggacctactggtgctaca	CRISPR spacer
tgccacgggtatcacaggttcaactggagctactggtgctaca	Protospacer
************************.*** **************

31. spacer 1.9|1879669|43|NZ_CP011150|CRT matches to position: 1877725-1877767, mismatch: 2, identity: 0.953

tgctacaggtatcacaggttcaaccggtccgactggtgctact	CRISPR spacer
tgccacgggtatcacaggttcaaccggtccgactggtgctact	Protospacer
***.**.************************************

32. spacer 1.9|1879669|43|NZ_CP011150|CRT matches to position: 1878463-1878505, mismatch: 2, identity: 0.953

tgctacaggtatcacaggttcaaccggtccgactggtgctact	CRISPR spacer
tgccacgggtatcacaggttcaaccggtccgactggtgctact	Protospacer
***.**.************************************

33. spacer 1.10|1879741|43|NZ_CP011150|CRT matches to position: 1878283-1878325, mismatch: 2, identity: 0.953

tgctacaggaattacaggttcaaccggtccgactggtgctact	CRISPR spacer
tgctacaggtatcacaggttcaaccggtccgactggtgctact	Protospacer
********* **.******************************

34. spacer 1.11|1879813|43|NZ_CP011150|CRT matches to position: 1878787-1878829, mismatch: 2, identity: 0.953

ggccactggaatcacgggtgcaactggagctactggtgccacg	CRISPR spacer
ggccactggaatcacgggtgctaccggagctactggtgccacg	Protospacer
********************* **.******************

35. spacer 1.13|1879966|43|NZ_CP011150|CRT matches to position: 1878787-1878829, mismatch: 2, identity: 0.953

ggccactggaatcacgggtgcaactggagctactggtgccacg	CRISPR spacer
ggccactggaatcacgggtgctaccggagctactggtgccacg	Protospacer
********************* **.******************

36. spacer 1.14|1880038|52|NZ_CP011150|CRT matches to position: 1878931-1878982, mismatch: 2, identity: 0.962

tgctactggtatcacaggttcaaccggacctactggggccactggtgtgacg	CRISPR spacer
tgctactggtatcacaggttcaaccggacctactggggccactggtatcacg	Protospacer
**********************************************.* ***

37. spacer 1.19|1880407|43|NZ_CP011150|CRT matches to position: 1877509-1877551, mismatch: 2, identity: 0.953

ggccacgggtatcacaggttcaaccggatctactggtgccacg	CRISPR spacer
ggccacgggtatcacaggttcaaccggacctactggggccacg	Protospacer
****************************.******* ******

38. spacer 1.19|1880407|43|NZ_CP011150|CRT matches to position: 1878022-1878064, mismatch: 2, identity: 0.953

ggccacgggtatcacaggttcaaccggatctactggtgccacg	CRISPR spacer
ggccacgggtatcacaggttcaaccggagctactggggccacg	Protospacer
**************************** ******* ******

39. spacer 1.20|1880479|43|NZ_CP011150|CRT matches to position: 1877950-1877992, mismatch: 2, identity: 0.953

tgctacaggaattacaggttcaactggagctactggggccaca	CRISPR spacer
tgctacaggaattacaggttcaaccggatctactggggccaca	Protospacer
************************.*** **************

40. spacer 1.21|1880551|43|NZ_CP011150|CRT matches to position: 1878058-1878100, mismatch: 2, identity: 0.953

ggccacgggtatcacaggttcaaccggtccgactggtgctact	CRISPR spacer
ggccacgggtatcacaggttcaaccggacctactggtgctact	Protospacer
*************************** ** ************

41. spacer 1.25|1880848|43|NZ_CP011150|CRT matches to position: 1877545-1877587, mismatch: 2, identity: 0.953

ggccacgggtatcacaggttcaaccggacctactggtgctact	CRISPR spacer
ggccacgggtatcacaggttcaaccggagctactggtgccact	Protospacer
**************************** **********.***

42. spacer 1.25|1880848|43|NZ_CP011150|CRT matches to position: 1878355-1878397, mismatch: 2, identity: 0.953

ggccacgggtatcacaggttcaaccggacctactggtgctact	CRISPR spacer
ggccacgggtatcacaggttcaaccggtccgactggtgctact	Protospacer
*************************** ** ************

43. spacer 1.25|1880848|43|NZ_CP011150|CRT matches to position: 1878535-1878577, mismatch: 2, identity: 0.953

ggccacgggtatcacaggttcaaccggacctactggtgctact	CRISPR spacer
ggccacgggtatcacaggttcaaccggagctactggtgccact	Protospacer
**************************** **********.***

44. spacer 1.26|1880920|43|NZ_CP011150|CRT matches to position: 1877509-1877551, mismatch: 2, identity: 0.953

ggccacgggtatcacaggttcaaccggagctactggtgccacg	CRISPR spacer
ggccacgggtatcacaggttcaaccggacctactggggccacg	Protospacer
**************************** ******* ******

45. spacer 1.28|1881064|52|NZ_CP011150|CRT matches to position: 1878166-1878217, mismatch: 2, identity: 0.962

tgctactggtatcacaggttcaaccggtccgactggggccactggtgtgacg	CRISPR spacer
tgctactggtatcacaggttcaaccggacctactggggccactggtgtgacg	Protospacer
*************************** ** *********************

46. spacer 1.32|1881361|43|NZ_CP011150|CRT matches to position: 1877545-1877587, mismatch: 2, identity: 0.953

ggccacgggtatcacaggttcaaccggacctactggggccact	CRISPR spacer
ggccacgggtatcacaggttcaaccggagctactggtgccact	Protospacer
**************************** ******* ******

47. spacer 1.32|1881361|43|NZ_CP011150|CRT matches to position: 1878058-1878100, mismatch: 2, identity: 0.953

ggccacgggtatcacaggttcaaccggacctactggggccact	CRISPR spacer
ggccacgggtatcacaggttcaaccggacctactggtgctact	Protospacer
************************************ **.***

48. spacer 1.32|1881361|43|NZ_CP011150|CRT matches to position: 1878535-1878577, mismatch: 2, identity: 0.953

ggccacgggtatcacaggttcaaccggacctactggggccact	CRISPR spacer
ggccacgggtatcacaggttcaaccggagctactggtgccact	Protospacer
**************************** ******* ******

49. spacer 1.33|1881433|43|NZ_CP011150|CRT matches to position: 1878751-1878793, mismatch: 2, identity: 0.953

ggccacgggtatcacaggttcaaccggagctactggtgctact	CRISPR spacer
ggccacgggtatcacaggttcaaccggagctactggggccact	Protospacer
************************************ **.***

50. spacer 1.34|1881505|43|NZ_CP011150|CRT matches to position: 1877986-1878028, mismatch: 2, identity: 0.953

ggccactggaatcacgggtgcaactggagctactggggccacg	CRISPR spacer
ggccacaggtatcacgggtgcaactggagctactggggccacg	Protospacer
****** ** *********************************

51. spacer 1.35|1881577|43|NZ_CP011150|CRT matches to position: 1878319-1878361, mismatch: 2, identity: 0.953

tgctactggtatcacaggttcaaccggatctactggtgccacg	CRISPR spacer
tgctactggtatcacaggttcaaccggacctactggggccacg	Protospacer
****************************.******* ******

52. spacer 1.35|1881577|43|NZ_CP011150|CRT matches to position: 1878499-1878541, mismatch: 2, identity: 0.953

tgctactggtatcacaggttcaaccggatctactggtgccacg	CRISPR spacer
tgctactggtatcacaggttcaaccggacctactggggccacg	Protospacer
****************************.******* ******

53. spacer 1.35|1881577|43|NZ_CP011150|CRT matches to position: 1878715-1878757, mismatch: 2, identity: 0.953

tgctactggtatcacaggttcaaccggatctactggtgccacg	CRISPR spacer
tgctactggtatcacaggttcaaccggacctactggggccacg	Protospacer
****************************.******* ******

54. spacer 1.36|1881649|43|NZ_CP011150|CRT matches to position: 1877950-1877992, mismatch: 2, identity: 0.953

tgctacaggaattacaggttcaactggagctactggggccaca	CRISPR spacer
tgctacaggaattacaggttcaaccggatctactggggccaca	Protospacer
************************.*** **************

55. spacer 1.37|1881721|43|NZ_CP011150|CRT matches to position: 1878319-1878361, mismatch: 2, identity: 0.953

tgctactggtatcacaggttcaaccggacctactggagcaacg	CRISPR spacer
tgctactggtatcacaggttcaaccggacctactggggccacg	Protospacer
************************************.** ***

56. spacer 1.37|1881721|43|NZ_CP011150|CRT matches to position: 1878499-1878541, mismatch: 2, identity: 0.953

tgctactggtatcacaggttcaaccggacctactggagcaacg	CRISPR spacer
tgctactggtatcacaggttcaaccggacctactggggccacg	Protospacer
************************************.** ***

57. spacer 1.37|1881721|43|NZ_CP011150|CRT matches to position: 1878715-1878757, mismatch: 2, identity: 0.953

tgctactggtatcacaggttcaaccggacctactggagcaacg	CRISPR spacer
tgctactggtatcacaggttcaaccggacctactggggccacg	Protospacer
************************************.** ***

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

580588 : 589303

uncultured_Mediterranean_phage(16.67%)

tRNA

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_008342028.1\|580588_581863_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	1.7e-95	50.1
WP_046342794.1\|581964_582795_+	chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	7.1e-10	54.4
WP_035391602.1\|583101_583761_-	deoxynucleoside kinase	C1KFI3	Lactobacillus_virus	8.4e-22	33.2
WP_007496058.1\|583757_584381_-	deoxynucleoside kinase	A0A1G5SAJ8	Enterococcus_phage	2.6e-12	28.8
WP_035391604.1\|584460_585762_-	glycoside hydrolase family 18 protein	A0A2P1CIG4	Microbacterium_phage	1.4e-07	34.8
WP_017359012.1\|585807_586362_-	cysteine hydrolase	NA	NA	NA	NA
WP_008342015.1\|586441_586918_+	nucleoside deaminase	NA	NA	NA	NA
WP_046342797.1\|587590_589303_+	DNA polymerase III subunit gamma/tau	D9ZNI9	Clostridium_phage	6.8e-55	34.4

DBSCAN-SWA_2

647062 : 656958

Synechococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_035703533.1\|647062_648358_+	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	2.9e-18	26.9
WP_007496901.1\|648430_649153_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A0E3G7P8	Synechococcus_phage	1.8e-46	43.7
WP_003214349.1\|649145_649400_+	phosphoribosylformylglycinamidine synthase subunit PurS	A0A0E3FKD5	Synechococcus_phage	1.2e-05	33.3
WP_017359821.1\|649396_650080_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_008344291.1\|650063_652295_+	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	2.9e-159	42.0
WP_008344290.1\|652270_653701_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	1.3e-51	32.9
WP_017366751.1\|653797_654838_+	phosphoribosylformylglycinamidine cyclo-ligase	A0A0E3F760	Synechococcus_phage	1.1e-65	43.8
WP_008344288.1\|654834_655404_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	2.9e-31	39.5
WP_007496894.1\|655419_656958_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	4.8e-76	51.8

DBSCAN-SWA_3

1117048 : 1209491

118

Bacillus_phage(25.53%)

integrase,terminase,tail,portal,capsid,holin,coat,tRNA,plate

attL 1134321:1134336|attR 1170081:1170096

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_046343179.1\|1117048_1118044_-\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA
WP_056705176.1\|1118360_1118720_-	DUF3899 domain-containing protein	NA	NA	NA	NA
WP_035392439.1\|1119073_1120732_+	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_035392438.1\|1120841_1121771_+	ABC transporter permease	NA	NA	NA	NA
WP_035392435.1\|1121770_1122799_+	ABC transporter permease	NA	NA	NA	NA
WP_035392433.1\|1122817_1123879_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.0e-16	29.7
WP_035392432.1\|1123871_1124798_+	ATP-binding cassette domain-containing protein	M1HP82	Acanthocystis_turfacea_Chlorella_virus	1.1e-06	25.4
WP_046343182.1\|1124904_1125192_+	hypothetical protein	NA	NA	NA	NA
WP_007499012.1\|1125329_1125908_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_003211421.1\|1126101_1126497_+	transcriptional regulator Spx	NA	NA	NA	NA
WP_007499010.1\|1126537_1127203_-	TerC family protein	W8EBD0	Pseudomonas_phage	1.9e-29	37.5
WP_008348474.1\|1127467_1128133_+	adaptor protein MecA	NA	NA	NA	NA
WP_008348473.1\|1128218_1129739_+	cardiolipin synthase	NA	NA	NA	NA
WP_035392426.1\|1129901_1131062_+	competence protein	NA	NA	NA	NA
WP_123766606.1\|1131099_1133103_+	oligoendopeptidase F	A0A1X9I5X5	Streptococcus_phage	6.9e-59	25.3
WP_035392421.1\|1133337_1133511_-	hypothetical protein	NA	NA	NA	NA
WP_007499002.1\|1133806_1134718_-	DsbA family protein	NA	NA	NA	NA
1134321:1134336	attL	NA	NA	NA	NA
WP_007499001.1\|1134714_1135113_-	thiol management oxidoreductase	NA	NA	NA	NA
WP_008348461.1\|1135390_1136155_-	lytic transglycosylase domain-containing protein	A0A1P8CWQ1	Bacillus_phage	1.1e-36	68.1
WP_007498999.1\|1136180_1136756_-	CYTH domain-containing protein	NA	NA	NA	NA
WP_008348459.1\|1136973_1137339_+	hypothetical protein	NA	NA	NA	NA
WP_008348457.1\|1137372_1138002_+	GTP pyrophosphokinase family protein	NA	NA	NA	NA
WP_008355343.1\|1138067_1138868_+	NAD kinase	NA	NA	NA	NA
WP_080934024.1\|1138876_1139779_+	RluA family pseudouridine synthase	NA	NA	NA	NA
WP_017359667.1\|1139819_1140563_-	bis(5'-nucleosyl)-tetraphosphatase PrpE	S4TT53	Salmonella_phage	3.9e-07	23.6
WP_007498989.1\|1140723_1142571_+	monovalent cation:proton antiporter family protein	NA	NA	NA	NA
WP_046343186.1\|1142812_1143523_+	thiaminase II	NA	NA	NA	NA
WP_046343188.1\|1143497_1144115_+	thiazole tautomerase TenI	NA	NA	NA	NA
WP_046343189.1\|1144098_1145211_+	glycine oxidase ThiO	NA	NA	NA	NA
WP_017367025.1\|1145207_1145411_+	sulfur carrier protein ThiS	NA	NA	NA	NA
WP_007498979.1\|1145415_1146183_+	thiazole synthase	NA	NA	NA	NA
WP_017359662.1\|1146179_1147193_+	thiazole biosynthesis adenylyltransferase ThiF	NA	NA	NA	NA
WP_046343190.1\|1147210_1148017_+	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA
WP_017359660.1\|1148166_1148943_+	enoyl-ACP reductase FabI	NA	NA	NA	NA
WP_046343192.1\|1149056_1149632_+\|coat	spore coat protein	NA	NA	NA	NA
WP_008348434.1\|1149669_1150113_-\|coat	spore coat protein	NA	NA	NA	NA
WP_008348432.1\|1150325_1150817_-\|coat	spore coat protein	NA	NA	NA	NA
WP_008348431.1\|1150964_1151450_-\|coat	spore coat protein	NA	NA	NA	NA
WP_008355377.1\|1151538_1151874_-	hypothetical protein	NA	NA	NA	NA
WP_007498962.1\|1151918_1152305_-\|coat	spore coat protein	NA	NA	NA	NA
WP_046343195.1\|1152482_1152833_+	DUF1360 domain-containing protein	NA	NA	NA	NA
WP_008348420.1\|1153117_1153339_+	hypothetical protein	NA	NA	NA	NA
WP_008348419.1\|1153423_1153561_+	YjcZ family sporulation protein	NA	NA	NA	NA
WP_008348417.1\|1153697_1153955_+	stage VI sporulation protein F	NA	NA	NA	NA
WP_046343198.1\|1153971_1156281_-	ATP-dependent helicase	G3MA40	Bacillus_virus	2.2e-80	34.3
WP_008348414.1\|1156407_1156665_+	hypothetical protein	NA	NA	NA	NA
WP_008348412.1\|1156748_1157183_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_024720139.1\|1157189_1157705_-	2'-5' RNA ligase family protein	NA	NA	NA	NA
WP_008348407.1\|1157757_1158498_-	esterase family protein	NA	NA	NA	NA
WP_046343201.1\|1158919_1160038_+	methionine biosynthesis PLP-dependent protein	A0A0B5JD48	Pandoravirus	4.0e-16	26.2
WP_007498948.1\|1160034_1161213_+	cystathionine beta-lyase	NA	NA	NA	NA
WP_046343202.1\|1161508_1162744_-\|integrase	site-specific integrase	A0A0K2CZ62	Paenibacillus_phage	5.9e-109	50.0
WP_046343204.1\|1162736_1163240_-	ImmA/IrrE family metallo-endopeptidase	A0A2H4JA43	uncultured_Caudovirales_phage	2.0e-23	34.4
WP_046343206.1\|1163337_1163964_-	DUF4352 domain-containing protein	NA	NA	NA	NA
WP_123766607.1\|1164017_1164380_-	helix-turn-helix transcriptional regulator	A8ATX5	Listeria_phage	7.6e-09	42.9
WP_046343209.1\|1164550_1164748_+	helix-turn-helix transcriptional regulator	A8ATX6	Listeria_phage	2.3e-12	54.7
WP_046343210.1\|1164793_1164988_+	helix-turn-helix domain-containing protein	U5P0W4	Brevibacillus_phage	2.2e-10	55.9
WP_034667563.1\|1165090_1165342_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_046343211.1\|1165344_1165614_+	hypothetical protein	NA	NA	NA	NA
WP_155267116.1\|1165614_1165785_+	hypothetical protein	NA	NA	NA	NA
WP_025092874.1\|1165974_1166166_+	hypothetical protein	NA	NA	NA	NA
WP_025092875.1\|1166198_1166420_+	hypothetical protein	NA	NA	NA	NA
WP_046343215.1\|1166527_1167448_+	hypothetical protein	A0A0A7RUE9	Clostridium_phage	5.5e-88	62.7
WP_080934026.1\|1167407_1168208_+	PD-(D/E)XK nuclease-like domain-containing protein	A0A0A7RUC1	Clostridium_phage	4.7e-59	48.3
WP_046343221.1\|1168421_1169282_+	hypothetical protein	R9U9G0	Vibrio_phage	5.3e-08	35.5
WP_046344954.1\|1169287_1169575_+	hypothetical protein	NA	NA	NA	NA
WP_046343223.1\|1169546_1170839_+	replicative DNA helicase	D2XR44	Bacillus_phage	2.3e-95	44.4
1170081:1170096	attR	NA	NA	NA	NA
WP_046343225.1\|1171044_1171497_+	RusA family crossover junction endodeoxyribonuclease	S6B1L9	Thermus_phage	2.5e-49	68.1
WP_046343227.1\|1171475_1171856_+	hypothetical protein	A0A1L2JY32	Aeribacillus_phage	4.7e-33	57.9
WP_046343229.1\|1171887_1172595_+	hypothetical protein	A0A1L2JZ42	Aeribacillus_phage	3.4e-61	57.0
WP_046343231.1\|1172880_1173075_+	hypothetical protein	NA	NA	NA	NA
WP_046343233.1\|1173235_1173442_+	hypothetical protein	NA	NA	NA	NA
WP_046343235.1\|1173522_1174371_+	hypothetical protein	NA	NA	NA	NA
WP_046343237.1\|1174411_1174795_+	ArpU family transcriptional regulator	Q9ZXB9	Bacillus_phage	3.4e-23	50.0
WP_123766593.1\|1174885_1176520_+	ribonuclease YeeF family protein	A0A1P8CWI7	Bacillus_phage	2.0e-40	40.4
WP_046343238.1\|1176541_1177003_+	hypothetical protein	NA	NA	NA	NA
WP_164071375.1\|1177579_1177735_+	hypothetical protein	NA	NA	NA	NA
WP_046343240.1\|1177768_1178113_+	hypothetical protein	Q38579	Bacillus_phage	3.2e-25	55.3
WP_052730105.1\|1178179_1178695_+	hypothetical protein	NA	NA	NA	NA
WP_046343242.1\|1178840_1179428_+	hypothetical protein	NA	NA	NA	NA
WP_046343243.1\|1179517_1179919_+	hypothetical protein	NA	NA	NA	NA
WP_046343244.1\|1180077_1180794_+	hypothetical protein	A0A2P1JTW4	Anoxybacillus_phage	8.8e-57	57.1
WP_046343245.1\|1180793_1182089_+\|terminase	PBSX family phage terminase large subunit	M4ZRM5	Bacillus_phage	2.0e-152	63.0
WP_046343246.1\|1182088_1183609_+\|portal	phage portal protein	A0A1B1P7C8	Bacillus_phage	6.0e-140	51.4
WP_046343247.1\|1183605_1184511_+	hypothetical protein	A0A1B1P7D7	Bacillus_phage	1.2e-47	38.8
WP_046343248.1\|1184595_1185420_+	hypothetical protein	NA	NA	NA	NA
WP_046343249.1\|1185446_1186610_+\|terminase	terminase	A0A1B1P7E4	Bacillus_phage	1.4e-80	49.0
WP_046343250.1\|1186633_1187563_+\|capsid	phage major capsid protein	A0A1B1P7E3	Bacillus_phage	5.0e-105	64.8
WP_046343251.1\|1187568_1187934_+	YqbF domain-containing protein	NA	NA	NA	NA
WP_046343252.1\|1187939_1188332_+	DUF3199 family protein	NA	NA	NA	NA
WP_046343253.1\|1188328_1188685_+	YqbH/XkdH family protein	NA	NA	NA	NA
WP_046343254.1\|1188681_1189188_+	HK97 gp10 family phage protein	A0A249XXA4	Clostridium_phage	1.8e-40	48.8
WP_046343255.1\|1189192_1189648_+	hypothetical protein	NA	NA	NA	NA
WP_046343256.1\|1189634_1189859_+	hypothetical protein	NA	NA	NA	NA
WP_046343258.1\|1189861_1191208_+\|tail	phage tail sheath family protein	A0A0A7S087	Clostridium_phage	1.7e-85	42.1
WP_046343259.1\|1191209_1191653_+\|tail	phage tail tube protein	A0A0A7RVP1	Clostridium_phage	1.3e-26	45.8
WP_080934028.1\|1191893_1192007_-\|holin	putative holin-like toxin	NA	NA	NA	NA
WP_046343260.1\|1192151_1192601_+\|portal	phage portal protein	A0A0A7RTY8	Clostridium_phage	7.8e-11	31.2
WP_046343261.1\|1192780_1197745_+	transglycosylase SLT domain-containing protein	A0A1L2JY60	Aeribacillus_phage	5.9e-43	41.3
WP_046343262.1\|1197737_1198400_+	LysM peptidoglycan-binding domain-containing protein	A0A0K2SUI2	Clostridium_phage	2.5e-26	32.1
WP_046343263.1\|1198411_1199509_+	hypothetical protein	H7BV96	unidentified_phage	2.6e-36	28.0
WP_003212795.1\|1199505_1199787_+	DUF2577 family protein	S6C459	Thermus_phage	5.9e-09	40.4
WP_046343266.1\|1199786_1200215_+	DUF2634 domain-containing protein	A0A0A7RTU4	Clostridium_phage	1.3e-10	32.5
WP_046343268.1\|1200207_1201254_+\|plate	baseplate J/gp47 family protein	S6AVU3	Thermus_phage	1.5e-60	39.4
WP_046343270.1\|1201240_1202164_+	YmfQ family protein	A0A0A7RTT8	Clostridium_phage	1.2e-10	27.9
WP_046343271.1\|1202176_1202560_+\|tail	phage tail protein	NA	NA	NA	NA
WP_046343273.1\|1202577_1203708_+	hypothetical protein	A0A2H4J4R1	uncultured_Caudovirales_phage	1.6e-36	59.8
WP_046343275.1\|1203713_1204088_+	hypothetical protein	M4ZR44	Bacillus_phage	1.3e-11	41.9
WP_080934077.1\|1204087_1204228_+	XkdX family protein	NA	NA	NA	NA
WP_025092921.1\|1204289_1204502_+	hypothetical protein	A0A290GDY2	Caldibacillus_phage	6.0e-14	58.0
WP_046343279.1\|1204517_1204781_+\|holin	phage holin	A0A2H4J6M0	uncultured_Caudovirales_phage	1.3e-29	74.7
WP_046343281.1\|1204839_1205652_+	N-acetylmuramoyl-L-alanine amidase	Q9ZXD7	Bacillus_phage	1.3e-64	73.8
WP_046343284.1\|1205679_1206366_-	hypothetical protein	NA	NA	NA	NA
WP_052730106.1\|1206367_1206736_-	hypothetical protein	NA	NA	NA	NA
WP_046343286.1\|1206732_1207581_-	ParA family protein	A0A1X9IGI7	Lactococcus_phage	5.4e-29	32.9
WP_046343288.1\|1207837_1208569_+	hypothetical protein	NA	NA	NA	NA
WP_046343290.1\|1208587_1209220_+	hypothetical protein	NA	NA	NA	NA
WP_046343292.1\|1209302_1209491_-	BlaI/MecI/CopY family transcriptional regulator	A0A2H4J4T3	uncultured_Caudovirales_phage	2.0e-21	79.0

DBSCAN-SWA_4

1711042 : 1717291

Bacillus_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_017359034.1\|1711042_1711435_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	G3MBF1	Bacillus_virus	8.8e-27	56.5
WP_017359033.1\|1711394_1713497_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	U5PY35	Bacillus_phage	0.0e+00	82.8
WP_008344010.1\|1713514_1714495_+	class 1b ribonucleoside-diphosphate reductase subunit beta	F8WQ21	Bacillus_phage	4.2e-150	80.6
WP_046343578.1\|1714579_1715197_+	hypothetical protein	A0A127AYS1	Bacillus_phage	1.7e-45	45.3
WP_008344009.1\|1715252_1716011_-	N-acetylmuramoyl-L-alanine amidase	A0A0N6W8I1	Bacillus_phage	8.7e-47	53.8
WP_008344008.1\|1716331_1717291_+	stage V sporulation protein K	G3MAX6	Bacillus_virus	3.9e-52	39.6

DBSCAN-SWA_5

2076263 : 2083971

Ostreococcus_lucimarinus_virus(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_017359757.1\|2076263_2077355_-	3-dehydroquinate synthase	E5ERI4	Ostreococcus_lucimarinus_virus	3.1e-21	27.2
WP_046343851.1\|2077354_2078527_-	chorismate synthase	A0A291AU41	Pandoravirus	1.0e-41	34.7
WP_008344547.1\|2078603_2079380_-	protein-glutamate O-methyltransferase CheR	NA	NA	NA	NA
WP_003216015.1\|2079524_2079971_-	nucleoside-diphosphate kinase	D2E8E1	Anguillid_herpesvirus	1.5e-27	42.3
WP_007500951.1\|2080100_2081063_-	heptaprenyl diphosphate synthase component II	A0A1V0SE37	Indivirus	1.7e-07	26.0
WP_007500957.1\|2081087_2081792_-	demethylmenaquinone methyltransferase	NA	NA	NA	NA
WP_046343853.1\|2081795_2082563_-	heptaprenyl diphosphate synthase component 1	NA	NA	NA	NA
WP_008344541.1\|2082678_2082909_-	trp RNA-binding attenuation protein MtrB	NA	NA	NA	NA
WP_003215789.1\|2082932_2083502_-	GTP cyclohydrolase I FolE	E7DN69	Pneumococcus_phage	1.8e-49	57.3
WP_003215863.1\|2083692_2083971_-	non-specific DNA-binding protein Hbs	A7KV42	Bacillus_phage	5.6e-28	74.2

DBSCAN-SWA_6

2121826 : 2128414

Staphylococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_019743085.1\|2121826_2122978_-	D-alanyl-D-alanine carboxypeptidase	B6DZZ7	Stx2-converting_phage	1.9e-24	37.7
WP_046343883.1\|2123091_2123571_-	YpuI family protein	NA	NA	NA	NA
WP_008344462.1\|2123684_2124278_-	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	9.0e-15	36.0
WP_007501021.1\|2124267_2125026_-	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	6.5e-10	36.8
WP_008359694.1\|2125236_2125329_+	YjcZ family sporulation protein	NA	NA	NA	NA
WP_019743088.1\|2125417_2125942_+	DUF309 domain-containing protein	NA	NA	NA	NA
WP_008344455.1\|2126170_2126524_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_007501031.1\|2126637_2127102_-	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	2.1e-43	66.0
WP_080934044.1\|2127128_2127752_-	3,4-dihydroxy-2-butanone-4-phosphate synthase	A0A2H4PQS2	Staphylococcus_phage	2.6e-57	58.1
WP_026050106.1\|2127763_2128414_-	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	2.7e-41	40.8

DBSCAN-SWA_7

2752625 : 2818212

uncultured_Caudovirales_phage(27.59%)

terminase,tail,capsid,portal,holin,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039964161.1\|2752625_2753030_-\|holin	phage holin family protein	NA	NA	NA	NA
WP_008342942.1\|2753187_2753379_-	hypothetical protein	NA	NA	NA	NA
WP_007501934.1\|2753503_2753941_-	DNA starvation/stationary phase protection protein	A0A0A7RTZ1	Clostridium_phage	4.8e-50	65.5
WP_017358370.1\|2754072_2754219_+	YtzI protein	NA	NA	NA	NA
WP_046344294.1\|2754227_2754665_-	FixH family protein	NA	NA	NA	NA
WP_008342935.1\|2754788_2755262_-	S-ribosylhomocysteine lyase	NA	NA	NA	NA
WP_008342933.1\|2755390_2755615_+	membrane protein insertion efficiency factor YidD	A0A2H4PQM5	Staphylococcus_phage	2.1e-25	70.3
WP_025207845.1\|2755616_2756183_-	carbonic anhydrase	NA	NA	NA	NA
WP_046344296.1\|2756396_2757389_+	zinc ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_017358374.1\|2757466_2757709_-	type B 50S ribosomal protein L31	NA	NA	NA	NA
WP_046344298.1\|2757884_2759216_+	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA
WP_008342922.1\|2759232_2760285_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA
WP_008360682.1\|2760353_2760512_+	DUF1540 domain-containing protein	NA	NA	NA	NA
WP_017358376.1\|2760537_2760729_+	hypothetical protein	NA	NA	NA	NA
WP_008342917.1\|2760834_2761959_-	o-succinylbenzoate synthase	NA	NA	NA	NA
WP_046344301.1\|2761945_2763406_-	o-succinylbenzoate--CoA ligase	A0A2H4PQM9	Staphylococcus_phage	8.8e-80	35.1
WP_008342913.1\|2763477_2764296_-	1,4-dihydroxy-2-naphthoyl-CoA synthase	NA	NA	NA	NA
WP_046344303.1\|2764310_2765141_-	2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase	NA	NA	NA	NA
WP_046344305.1\|2765125_2766868_-	2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase	NA	NA	NA	NA
WP_008342907.1\|2766860_2768279_-	isochorismate synthase	NA	NA	NA	NA
WP_017358382.1\|2768661_2769600_+	1,4-dihydroxy-2-naphthoate polyprenyltransferase	NA	NA	NA	NA
WP_017367914.1\|2769717_2770452_+	TraR/DksA C4-type zinc finger protein	NA	NA	NA	NA
WP_008342900.1\|2770539_2771016_+	tryptophan-rich sensory protein	NA	NA	NA	NA
WP_007500615.1\|2778994_2779570_+	energy-coupled thiamine transporter ThiT	NA	NA	NA	NA
WP_080934055.1\|2779662_2779851_+	hypothetical protein	NA	NA	NA	NA
WP_017359009.1\|2779810_2780365_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_046344307.1\|2780514_2781174_+	DUF1232 domain-containing protein	NA	NA	NA	NA
WP_017359008.1\|2781188_2782343_+	rod shape-determining protein RodA	NA	NA	NA	NA
WP_080934056.1\|2782354_2783482_+	putative lipid II flippase FtsW	NA	NA	NA	NA
WP_008344044.1\|2783513_2785061_-	flotillin family protein	A0A2I2L4B2	Orpheovirus	9.5e-08	28.4
WP_017367919.1\|2785072_2785603_-	hypothetical protein	NA	NA	NA	NA
WP_080934057.1\|2785778_2786288_+	DinB family protein	NA	NA	NA	NA
WP_035701121.1\|2786328_2787537_-	iron-containing alcohol dehydrogenase	NA	NA	NA	NA
WP_035701124.1\|2787564_2789034_-	betaine-aldehyde dehydrogenase	NA	NA	NA	NA
WP_046344315.1\|2789240_2789798_+	GbsR/MarR family transcriptional regulator	NA	NA	NA	NA
WP_039169955.1\|2790002_2790449_-	hypothetical protein	NA	NA	NA	NA
WP_046344321.1\|2790551_2791370_-	N-acetylmuramoyl-L-alanine amidase	Q9ZXD7	Bacillus_phage	2.1e-62	69.3
WP_046344330.1\|2791389_2791653_-\|holin	phage holin	A0A2H4J6M0	uncultured_Caudovirales_phage	7.7e-27	69.0
WP_008344062.1\|2791665_2791878_-	hypothetical protein	A0A290GDY2	Caldibacillus_phage	1.0e-13	56.5
WP_008344064.1\|2791934_2792081_-	XkdX family protein	NA	NA	NA	NA
WP_008344067.1\|2792081_2792429_-	hypothetical protein	NA	NA	NA	NA
WP_008344069.1\|2792431_2793850_-	hypothetical protein	A0A2H4J4R1	uncultured_Caudovirales_phage	1.1e-21	44.1
WP_008344072.1\|2793883_2795014_-	hypothetical protein	NA	NA	NA	NA
WP_017359001.1\|2795021_2795195_-\|portal	phage portal protein	A0A2H4JAA1	uncultured_Caudovirales_phage	1.8e-08	51.0
WP_008344076.1\|2795191_2795521_-	XkdW family protein	A0A2H4JCI0	uncultured_Caudovirales_phage	1.2e-08	35.6
WP_008344078.1\|2795531_2796410_-	hypothetical protein	NA	NA	NA	NA
WP_046344333.1\|2796425_2796809_-\|tail	phage tail protein	NA	NA	NA	NA
WP_046344339.1\|2796820_2797744_-	YmfQ family protein	A0A0A7RTT8	Clostridium_phage	1.2e-10	28.5
WP_017358998.1\|2797730_2798777_-\|plate	baseplate J/gp47 family protein	S6AVU3	Thermus_phage	2.9e-69	43.5
WP_046344341.1\|2798769_2799192_-	DUF2634 domain-containing protein	NA	NA	NA	NA
WP_017358996.1\|2799206_2799473_-	DUF2577 family protein	S6C459	Thermus_phage	4.7e-08	37.5
WP_046344343.1\|2799469_2800480_-	hypothetical protein	H7BV96	unidentified_phage	2.7e-35	28.7
WP_046344344.1\|2800492_2801161_-	LysM peptidoglycan-binding domain-containing protein	A0A0K2SUI2	Clostridium_phage	2.9e-22	29.6
WP_046344345.1\|2801153_2805212_-	transglycosylase SLT domain-containing protein	A0A1L2JY60	Aeribacillus_phage	6.3e-43	42.3
WP_008344097.1\|2805267_2805405_-	hypothetical protein	NA	NA	NA	NA
WP_034740076.1\|2805446_2805887_-\|portal	phage portal protein	A0A0A7RTY8	Clostridium_phage	1.3e-10	35.8
WP_074041930.1\|2806038_2806128_+\|holin	putative holin-like toxin	NA	NA	NA	NA
WP_003213309.1\|2806405_2806849_-\|tail	phage tail tube protein	A0A0A7RVP1	Clostridium_phage	7.6e-27	46.5
WP_046344348.1\|2806850_2808197_-\|tail	phage tail sheath family protein	A0A0A7S087	Clostridium_phage	2.1e-80	41.2
WP_008344108.1\|2808200_2808413_-	hypothetical protein	NA	NA	NA	NA
WP_046344349.1\|2808399_2808855_-	hypothetical protein	NA	NA	NA	NA
WP_046344351.1\|2808859_2809357_-	HK97 gp10 family phage protein	A0A249XXA4	Clostridium_phage	5.3e-37	46.2
WP_046344353.1\|2809353_2809710_-	YqbH/XkdH family protein	NA	NA	NA	NA
WP_007500574.1\|2809706_2810090_-	DUF3199 family protein	NA	NA	NA	NA
WP_008344119.1\|2810103_2811027_-\|capsid	phage major capsid protein	A0A1B1P7E3	Bacillus_phage	3.3e-109	64.3
WP_046344355.1\|2811049_2812141_-\|terminase	terminase	A0A1B1P7E4	Bacillus_phage	3.1e-61	40.9
WP_046344357.1\|2812175_2813633_-\|portal	phage portal protein	A0A1B1P7C8	Bacillus_phage	1.1e-138	53.0
WP_160758062.1\|2813629_2814931_-\|terminase	PBSX family phage terminase large subunit	M4ZRM5	Bacillus_phage	1.2e-152	62.5
WP_008344125.1\|2814939_2815587_-	helix-turn-helix domain-containing protein	A0A2P1JTW4	Anoxybacillus_phage	2.5e-42	43.7
WP_007500562.1\|2815739_2816258_-	sigma-70 family RNA polymerase sigma factor	A0A2H4J6J3	uncultured_Caudovirales_phage	1.4e-35	47.5
WP_008344129.1\|2816382_2816589_-	XtrA/YqaO family protein	A0A2H4J4M6	uncultured_Caudovirales_phage	9.0e-15	68.5
WP_046344359.1\|2816585_2816990_-	Holliday junction DNA helicase	NA	NA	NA	NA
WP_046344361.1\|2817092_2817275_-	hypothetical protein	NA	NA	NA	NA
WP_017358977.1\|2817264_2817417_-	hypothetical protein	A0A2H4J4L6	uncultured_Caudovirales_phage	8.7e-07	59.5
WP_017358976.1\|2817435_2817675_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_007500560.1\|2817834_2818212_+	helix-turn-helix transcriptional regulator	A0A2H4J6F9	uncultured_Caudovirales_phage	1.6e-17	45.4

DBSCAN-SWA_8

3120103 : 3129110

Streptococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_123766602.1\|3120103_3121084_+	D-glycerate dehydrogenase	M1HTA3	Paramecium_bursaria_Chlorella_virus	4.9e-18	26.9
WP_017368105.1\|3121264_3121753_+	ribonuclease	NA	NA	NA	NA
WP_025208025.1\|3121805_3122549_-	arylamine N-acetyltransferase	NA	NA	NA	NA
WP_008348124.1\|3122587_3122845_-	HPr family phosphocarrier protein	NA	NA	NA	NA
WP_008348125.1\|3122871_3123822_-	DNA-binding protein WhiA	Q7AWZ3	Streptococcus_phage	4.3e-51	38.1
WP_008348128.1\|3123839_3124799_-	YvcK family protein	A1IMD5	Streptococcus_phage	3.2e-62	40.4
WP_025208027.1\|3124799_3125687_-	RNase adapter RapZ	A0A0R8VB27	Thermobifida_phage	4.3e-05	26.3
WP_008348133.1\|3125726_3126191_-	8-oxo-dGTP diphosphatase	NA	NA	NA	NA
WP_024719880.1\|3126548_3127499_-	thioredoxin-disulfide reductase	G3MA85	Bacillus_virus	4.8e-87	53.1
WP_017357905.1\|3127733_3129110_-	C40 family peptidase	A0A0A0RVE6	Bacillus_phage	1.1e-26	54.3

DBSCAN-SWA_9

3387253 : 3436041

Escherichia_phage(25.0%)

coat,transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_017368235.1\|3387253_3387916_-\|protease	site-2 protease family protein	NA	NA	NA	NA
WP_008343530.1\|3388023_3388209_+	4-oxalocrotonate tautomerase	NA	NA	NA	NA
WP_017368236.1\|3388261_3389074_-\|protease	zinc-dependent metalloprotease	NA	NA	NA	NA
WP_017368237.1\|3389448_3390777_+	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA
WP_008343536.1\|3390816_3391701_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_008343538.1\|3391851_3392403_+	NADPH-dependent FMN reductase	NA	NA	NA	NA
WP_008343539.1\|3392386_3393412_+	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA
WP_008343541.1\|3393411_3393666_+	glutaredoxin family protein	NA	NA	NA	NA
WP_008343543.1\|3393700_3394264_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_008343545.1\|3394277_3395039_+	amino acid ABC transporter permease	NA	NA	NA	NA
WP_008343547.1\|3395056_3395899_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_008343549.1\|3395915_3396626_+	ABC transporter permease subunit	NA	NA	NA	NA
WP_017360086.1\|3396622_3397366_+	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	7.0e-33	38.7
WP_024719448.1\|3397470_3397971_-	YwgA family protein	NA	NA	NA	NA
WP_007497716.1\|3398001_3399303_-	HD domain-containing protein	A0A1V0SGM3	Hokovirus	1.6e-24	30.3
WP_003215259.1\|3399473_3399695_-	DUF1450 domain-containing protein	NA	NA	NA	NA
WP_007497717.1\|3399937_3400738_+	RsfA family transcriptional regulator	A0A1D6X8E5	Bacillus_phage	6.0e-06	48.0
WP_008343557.1\|3400773_3401007_-	hypothetical protein	NA	NA	NA	NA
WP_046344691.1\|3401003_3403280_-	glycosyltransferase	NA	NA	NA	NA
WP_046344693.1\|3403383_3403869_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_046345031.1\|3403908_3404754_-	lipoate--protein ligase family protein	NA	NA	NA	NA
WP_046344694.1\|3404990_3405386_-	SMI1/KNR4 family protein	NA	NA	NA	NA
WP_046344696.1\|3405418_3405694_-	hypothetical protein	NA	NA	NA	NA
WP_046344697.1\|3405759_3406032_-	hypothetical protein	NA	NA	NA	NA
WP_024719455.1\|3406146_3406482_-	hypothetical protein	NA	NA	NA	NA
WP_046344700.1\|3406496_3408203_-\|transposase	transposase	NA	NA	NA	NA
WP_008343583.1\|3408214_3408493_-	YwqI/YxiC family protein	NA	NA	NA	NA
WP_008343584.1\|3408497_3408896_-	DUF5082 family protein	NA	NA	NA	NA
WP_017360098.1\|3409070_3409337_-	hypothetical protein	NA	NA	NA	NA
WP_046344702.1\|3409350_3410685_-	TRAP transporter large permease subunit	NA	NA	NA	NA
WP_046344704.1\|3410728_3411607_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_079919313.1\|3411618_3412290_-	RraA family protein	NA	NA	NA	NA
WP_046344706.1\|3412432_3413284_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
WP_046344708.1\|3413420_3414392_-	phosphate acetyltransferase	NA	NA	NA	NA
WP_024719459.1\|3414631_3415402_+	heme-dependent peroxidase	NA	NA	NA	NA
WP_017360103.1\|3415469_3416630_+	MFS transporter	NA	NA	NA	NA
WP_046344710.1\|3416645_3417125_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
WP_046344711.1\|3417270_3418503_+	MFS transporter	NA	NA	NA	NA
WP_046344712.1\|3418652_3419258_+	bacilysin biosynthesis protein BacA	NA	NA	NA	NA
WP_046344713.1\|3419259_3419967_+	cupin domain-containing protein	NA	NA	NA	NA
WP_046344714.1\|3419963_3420725_+	glucose 1-dehydrogenase	Q06VL0	Trichoplusia_ni_ascovirus	1.1e-25	33.5
WP_046344715.1\|3420739_3422161_+	ATP-grasp domain-containing protein	NA	NA	NA	NA
WP_080934068.1\|3422175_3423372_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_046344716.1\|3423387_3424185_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_017360110.1\|3424271_3424727_-	dTDP-4-dehydrorhamnose 3,5-epimerase family protein	NA	NA	NA	NA
WP_017360111.1\|3424719_3425574_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	8.6e-35	37.8
WP_017360112.1\|3425577_3426543_-	dTDP-glucose 4,6-dehydratase	K7QJG5	Escherichia_phage	5.5e-78	45.6
WP_017360113.1\|3426539_3427280_-	NTP transferase domain-containing protein	G3MA50	Bacillus_virus	1.0e-44	41.6
WP_046344718.1\|3427282_3428311_-\|coat	spore coat protein	NA	NA	NA	NA
WP_046344720.1\|3428307_3429048_-	glycosyltransferase family protein	NA	NA	NA	NA
WP_046344722.1\|3429037_3430162_-	N-acetylneuraminate synthase family protein	A0A1B1IVE2	uncultured_Mediterranean_phage	1.0e-22	29.9
WP_046344724.1\|3430163_3431039_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_017368269.1\|3431035_3432214_-	DegT/DnrJ/EryC1/StrS family aminotransferase	NA	NA	NA	NA
WP_046344725.1\|3432235_3433648_-\|coat	spore coat protein	NA	NA	NA	NA
WP_046345035.1\|3433654_3434425_-	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_007497779.1\|3434600_3435275_+	hypothetical protein	NA	NA	NA	NA
WP_007497781.1\|3435498_3436041_+\|coat	spore coat protein GerQ	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage