CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP009225	Clostridium sporogenes strain NCIMB 10696 chromosome, complete genome	2 crisprs	DEDDh,csa3,DinG,WYL,cas3	0	1	6	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP009225_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009225_1

3063041-3063167

Orphan

Consensus_repeat	Method
ATTTATCTTACATTAATTATATCGAATTTCTTTTTTTATACTTTATA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP009225_1

>merge|NZ_CP009225|1|3063041-3063167|CRISPRCasFinder
ATTTATCTTACATTAATTATATCGAATTTCTTTTTTTATACTTTATACCTTTTTTATATTTTTATAACTTATTTATTTGCATTTATCTTACATTAAATATATCGAATTTCTTTTTTTATACTTTATA

>NZ_CP009225|1|1|3063041-3063167|CRISPRCasFinder
ATTTATCTTACATTAATTATATCGAATTTCTTTTTTTATACTTTATA	CCTTTTTTATATTTTTATAACTTATTTATTTGC
ATTTATCTTACATTAAATATATCGAATTTCTTTTTTTATACTTTATA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009225.1\|WP_003484379.1\|3066426_3066726_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009225.1\|WP_033060725.1\|3059422_3059785_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009225.1\|WP_003484377.1\|3067154_3067373_-\|carbon-storage-regulator-CsrA	unknown	unknown	gnl\|CDD\|234973
NZ_CP009225.1\|WP_033060727.1\|3059801_3061913_-\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|133005
NZ_CP009225.1\|WP_033060732.1\|3067372_3067804_-\|flagellar-assembly-protein-FliW	unknown	unknown	gnl\|CDD\|237334
NZ_CP009225.1\|WP_033060715.1\|3052207_3054010_-\|thiamine-pyrophosphate-binding-protein	unknown	unknown	gnl\|CDD\|223107
NZ_CP009225.1\|WP_033060729.1\|3062045_3062876_-\|flagellin	unknown	unknown	gnl\|CDD\|183759
NZ_CP009225.1\|WP_033061155.1\|3063522_3065976_-\|flagellar-filament-capping-protein-FliD	unknown	unknown	gnl\|CDD\|236082
NZ_CP009225.1\|WP_033060705.1\|3048487_3049366_-\|NAD-dependent-epimerase/dehydratase-family-protein	unknown	unknown	gnl\|CDD\|366597
NZ_CP009225.1\|WP_033060709.1\|3049389_3050493_-\|FkbM-family-methyltransferase	unknown	unknown	gnl\|CDD\|273628
NZ_CP009225.1\|WP_033060733.1\|3067908_3068871_-\|flagellar-hook-associated-protein-FlgL	unknown	unknown	gnl\|CDD\|181087
NZ_CP009225.1\|WP_033060718.1\|3054002_3055070_-\|SIS-domain-containing-protein	unknown	unknown	gnl\|CDD\|184408
NZ_CP009225.1\|WP_033060735.1\|3071070_3071475_-\|flagellar-protein-FlgN	unknown	unknown	gnl\|CDD\|377465
NZ_CP009225.1\|WP_033060722.1\|3055940_3059393_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|340856
NZ_CP009225.1\|WP_030036042.1\|3066782_3067139_-\|flagellar-protein-FlaG	unknown	unknown	gnl\|CDD\|377090
NZ_CP009225.1\|WP_033060731.1\|3066003_3066390_-\|flagellar-export-chaperone-FliS	unknown	unknown	gnl\|CDD\|376819
NZ_CP009225.1\|WP_033060720.1\|3055074_3055899_-\|N-acetylneuraminate-synthase-family-protein	unknown	unknown	gnl\|CDD\|376990
NZ_CP009225.1\|WP_033060712.1\|3051057_3052185_-\|FkbM-family-methyltransferase	unknown	unknown	gnl\|CDD\|273628
NZ_CP009225.1\|WP_033060734.1\|3069010_3070876_-\|flagellar-hook-associated-protein-FlgK	unknown	unknown	gnl\|CDD\|224176
NZ_CP009225.1\|WP_033060730.1\|3063172_3063514_-\|flagellar-protein-FliT	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP009225.1\|WP_033060722.1\|3055940_3059393_-\|glycosyltransferase	gnl\|CDD\|340856	cd04950, GT4_TuaH-like, teichuronic acid biosynthesis glycosyltransferase TuaH and similar proteins. Members of this family may function in teichuronic acid biosynthesis/cell wall biogenesis. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.	1.12462e-41
NZ_CP009225.1\|WP_033060727.1\|3059801_3061913_-\|glycosyltransferase-family-2-protein	gnl\|CDD\|133005	cd02511, Beta4Glucosyltransferase, UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.	1.17641e-41
NZ_CP009225.1\|WP_033060732.1\|3067372_3067804_-\|flagellar-assembly-protein-FliW	gnl\|CDD\|237334	PRK13285, PRK13285, flagellar assembly protein FliW; Provisional.	6.79589e-64
NZ_CP009225.1\|WP_033060715.1\|3052207_3054010_-\|thiamine-pyrophosphate-binding-protein	gnl\|CDD\|223107	COG0028, IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] [Amino acid transport and metabolism / Coenzyme metabolism].	3.90523e-137
NZ_CP009225.1\|WP_033060729.1\|3062045_3062876_-\|flagellin	gnl\|CDD\|183759	PRK12804, PRK12804, flagellin; Provisional.	6.75089e-91
NZ_CP009225.1\|WP_033061155.1\|3063522_3065976_-\|flagellar-filament-capping-protein-FliD	gnl\|CDD\|236082	PRK07737, fliD, flagellar hook-associated protein 2.	2.40299e-59
NZ_CP009225.1\|WP_033060705.1\|3048487_3049366_-\|NAD-dependent-epimerase/dehydratase-family-protein	gnl\|CDD\|366597	pfam01370, Epimerase, NAD dependent epimerase/dehydratase family. This family of proteins utilize NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions.	7.41856e-27
NZ_CP009225.1\|WP_033060709.1\|3049389_3050493_-\|FkbM-family-methyltransferase	gnl\|CDD\|273628	TIGR01444, 2-O-methyltransferase_NoeI, methyltransferase, FkbM family. Members of this family are characterized by two well-conserved short regions separated by a variable in both sequence and length. The first of the two regions is found in a large number of proteins outside this subfamily, a number of which have been characterized as methyltransferases. One member of the present family, FkbM, was shown to be required for a specific methylation in the biosynthesis of the immunosuppressant FK506 in Streptomyces strain MA6548.	1.07863e-16
NZ_CP009225.1\|WP_033060733.1\|3067908_3068871_-\|flagellar-hook-associated-protein-FlgL	gnl\|CDD\|181087	PRK07701, flgL, flagellar hook-associated protein FlgL; Validated.	8.44079e-77
NZ_CP009225.1\|WP_033060718.1\|3054002_3055070_-\|SIS-domain-containing-protein	gnl\|CDD\|184408	PRK13937, PRK13937, phosphoheptose isomerase; Provisional.	4.18866e-75
NZ_CP009225.1\|WP_033060735.1\|3071070_3071475_-\|flagellar-protein-FlgN	gnl\|CDD\|377465	pfam05130, FlgN, FlgN protein. This family includes the FlgN protein and export chaperone involved in flagellar synthesis.	1.98626e-16
NZ_CP009225.1\|WP_003484377.1\|3067154_3067373_-\|carbon-storage-regulator-CsrA	gnl\|CDD\|234973	PRK01712, PRK01712, carbon storage regulator CsrA.	4.65383e-24
NZ_CP009225.1\|WP_030036042.1\|3066782_3067139_-\|flagellar-protein-FlaG	gnl\|CDD\|377090	pfam03646, FlaG, FlaG protein. Although important for flagella the exact function of this protein is unknown.	5.95626e-16
NZ_CP009225.1\|WP_033060731.1\|3066003_3066390_-\|flagellar-export-chaperone-FliS	gnl\|CDD\|376819	pfam02561, FliS, Flagellar protein FliS. FliS is coded for by the FliD operon and is transcribed in conjunction with FliD and FliT, however this protein has no known function.	1.1323e-47
NZ_CP009225.1\|WP_033060720.1\|3055074_3055899_-\|N-acetylneuraminate-synthase-family-protein	gnl\|CDD\|376990	pfam03102, NeuB, NeuB family. NeuB is the prokaryotic N-acetylneuraminic acid (Neu5Ac) synthase. It catalyzes the direct formation of Neu5Ac (the most common sialic acid) by condensation of phosphoenolpyruvate (PEP) and N-acetylmannosamine (ManNAc). This reaction has only been observed in prokaryotes; eukaryotes synthesize the 9-phosphate form, Neu5Ac-9-P, and utilize ManNAc-6-P instead of ManNAc. Such eukaryotic enzymes are not present in this family. This family also contains SpsE spore coat polysaccharide biosynthesis proteins.	3.98603e-99
NZ_CP009225.1\|WP_033060712.1\|3051057_3052185_-\|FkbM-family-methyltransferase	gnl\|CDD\|273628	TIGR01444, 2-O-methyltransferase_NoeI, methyltransferase, FkbM family. Members of this family are characterized by two well-conserved short regions separated by a variable in both sequence and length. The first of the two regions is found in a large number of proteins outside this subfamily, a number of which have been characterized as methyltransferases. One member of the present family, FkbM, was shown to be required for a specific methylation in the biosynthesis of the immunosuppressant FK506 in Streptomyces strain MA6548.	1.38938e-15
NZ_CP009225.1\|WP_033060734.1\|3069010_3070876_-\|flagellar-hook-associated-protein-FlgK	gnl\|CDD\|224176	COG1256, FlgK, Flagellar hook-associated protein [Cell motility and secretion].	2.76242e-97

>NZ_CP009225.1|WP_033060729.1|3062045_3062876_-|flagellin
MIINHNLNAMNAHRNMGINTGNSAKAMEKLSSGLRINRAGDDAAGLSISEKMRAQIRGLNQASRNAQDGISLIQTAEGALNETHSILQRMRELSVQAANDTNVTVDREAIQEELTSLTNEVDRIAKTTQFNEKNLLNGSLATTGAKLQIGANKDADLTLEIKISGMDSTKLGIQAANVSVKDHATAQTAVENVNKAIKTVSTERSKLGAYQNRLEHTIANLDNASENLQAAESRVRDVDMAKEMMNFSKNNILQQAAQAMLAQANQAPQGVLQLLR
>NZ_CP009225.1|WP_033060727.1|3059801_3061913_-|glycosyltransferase-family-2-protein
MKLSIAMIVKNEEKNLERTLIPLKKLQDYIDAEIIIVDTGSTDNSVDIAKKYTDKIYFHKWNSDFGSMRNLSIRYCTGDWILIVDADEELYDIEELANLINSKILKKYYSAFIKIVDFSQSIQNSVSSGAISPLLRLFKKNTVKYEGIIHEQPICSEPTLDSQIRFIHYGYDNNNYELMEHKFQRNIKLLFKELDEKPNSIYVYFQIATSYLMHKDLQKALKYIEIAYKKASKKGLCNYIYVIDKYCLILYTLKSYDTLIYKAKEGIKYCDKFIDFYFYLGEAYNNLNQYDKAIQPYEMYLDLYKNRNKNDILAEFSISIFTIEYKNAVIYHLGLCYYQNKFYEKALSLILTIDDNNFMHDKITIICKIIEDGGLWNKFYILNNFIDIHNYDEILIFLHNNVFMENLIMINSQEIDGFLKEMLDIVIYFKNNGNINYKHLEKIKRIISRNKKLYSIYVYYVLKFDINEFDFFINYGKKELKNILSKLIFTYYDFGSYLENKLNNFKEYNTISVIKHNIIMEALLNSRKLQIDKRRILFLDFLADKFYSIVKLYKFEYICDNKWILPPKERFIIELKEAISYKYIDSIRYIKKIKDILNIDKSYVDYIKLLIEENEEFISNNKIKAFMPELVKNIEELINTKKYQEAYNNIEEALSLVKFDFDLMVLKYKLLVNFNYEKEAMQCLREIILYGDIERVTKLINNL
>NZ_CP009225.1|WP_033060725.1|3059422_3059785_-|hypothetical-protein
MEKSIEEQQFEVLQSADEYIVKLINGINMYMSNIKEREYDEALNLLSYILEGIDWLNEVVRLTKDIQKENMDEELMKKQLEKISEYLNIEDYDRISKLLYEGILPLLNTWKDVIKKSIAF
>NZ_CP009225.1|WP_033060722.1|3055940_3059393_-|glycosyltransferase
MQDMEQYKSKVKKNIENLINSNALEDAKKIIKEYKELVNNDVDIYSFEGVIAMLEDNMDKAEIILKRGNTICQDSFDILYNLGYLYESVNNNELAIEYYKKALINSNNGSEEYSAYNSLTNLGSKDTKADIIAQKYYEDAIKLDKMGNRSDAALYYGLTYRYSKDKELKNRICHLYDKNEALKNIFNVTANSKKRRFIILSSCGWNDIYQRMHHISRALVKLGNEVIYITPTIEANINSENVRLNALIEYSIKNRKIVDGVKIYSPILAMYDEKIIYNTYTYLIQRLLDMATEANKTIIVTYMPYQIGAISSLKGSFVHIYDCVDDHSDLDYAFWGNKKDNVWEQELMDRADAITTTAISLYLQKVSIEGRKNVYLSRNAVNEGDFIFSDENIPEDLKNIPEPRIVYTGAIYDWFDKELFYEIVKSNPDKSFIVIGFGNDKILKEKCSNLYILGPKKHNELKMYLKYCQAGIIPFKDDIDLIINCDPIKQYEYIACGLPVVTTYMPESTIDKINTFLANTKESFSEAIEKSINLKIDKNAVSNFLSENSWNTRAALLCNIADDKIRESERNNLIKNIENKLIEICTIYNSPIFDTLKAMSLNLKDSMKSEEYLAKCYNKSKHNRFIERQYLIALLQNNNINTFIDVAINSKNIKNELKEELIYHKKLNNNKLVEIILYLCIGGIKKAIILINILEDENFKNLYKLYIRFLFEEEVKNKDLKIIGVRAKCSPVFKMLQKNLNEKRVIIENSNKDPFISVIIPTRNSAQVLKYALMTCIDQNYDNYEIIVSDNSSPGNNETKKLVNELNCKKIKYFRTPEEYAMKENYEFAYEQSSGEYILLMGSDDGLLLHCLEVLSEFIKKLNRPGSITWDPVAYGWPNVGINSIKNGLFIPYPSQKNNIKFSYYDESMLNAVLNFKARYSILPMFYYNSIIKRELVEEAKKTSGKIFYASADVSTGIMFAYLQKKYIHVNMPMTIGGSSQNSVGLSYVNDINKSEYDKFRCDMDQLKKYNNITSKCNLFYMPSFVTEETAVLISFIIAKSLYLKEYKNFDVDMHQYYKVCAKHLFNDNNLETKKKYLYQSIKEYGNNEIIKWYEKNYINNKDFKGYTNYEKEPLIPSYRPNGGLVIDCSKFNASNVFEASTLYRNIVGY
>NZ_CP009225.1|WP_033060720.1|3055074_3055899_-|N-acetylneuraminate-synthase-family-protein
MNTYIIAEIGINHNGDMNITKKLIDTAVIAGCDAVKFQKRTIDKVYTEEYLTSPRVSPWGNTQREQKEGLEFNEIQYDEINKYCEFKGIDWFASAWDIGSQKFLQKYNLKYNKVASAMLTNYELLEEIANEKKYTFISTGMSTYDEIDKAVQIFRKKNCSFELMHCNSTYPMKNEDANLLMINNLKYRYDCKVGYSGHETGTLVSISAVALGATSIERHITLDKSMYGSDQAASIEPYELYKLVKEIREIEKILGNGQKVLNEEEMKVRKKLRG
>NZ_CP009225.1|WP_033060718.1|3054002_3055070_-|SIS-domain-containing-protein
MIKTIIFDIDGVITDGSIIVNEAGNEQKKVNLKDIDAIFELKRRGFTIAAITGENSPIVSYFKKRFSWDYFYYGKKNKIEIIKEIEKACKIECNEICYIGDGKYDVESLKYVELGICPSDAIDKAKNAADIILQYKGGEGCLWELISILESYNNKDNSNNYFYKRLEEHTNIFKTMASDVKLIKDIMQIGDEIIELLKNKSQVFLCGNGGSAADAQHIATEFISRFYKERRALNAEALTTNTSTLTAVSNDYSYERVFVRQLEAKAKKGDMIIGISTSGKSKNIIEALRFAKEEGLITVMLMGDYKNDCLEEITDYIIKVPSKITPRIQEAHIFIGHLIAEYVEHKIFEGDSIDD
>NZ_CP009225.1|WP_033060715.1|3052207_3054010_-|thiamine-pyrophosphate-binding-protein
MIKLSDYVFKFIEEKGIKHAFMLPGGGAMHLIDSIGKSKIEYICCGHEQAVAIAAESYGQHTNDIGVALVTSGPGATNAITGVTAGWIDSTPMFIISGQAKRSDLIGSSGVRQMGSQEVHVIDMVKSITKYAVQILDPKEIKYHLEKAYYEATTGRMGPVWLDIPLDVQAAMINEEKLIGYKEQNGYKCNFNIETEVKEVVELFKYSRKPLILAGNGIKLSNAEQEFYKFIDKLQVPVQTTWKTVDLIEENHPLYAGHPGIMGDRGANFVLQSCDLLIILGSRLDTSITAFNHANFGINAKKIMVDIDEHEIDKMKIDIKVKVVSNVKDFILKLNSKTDEIVKSKILNKIDENNKWLIYCKNIREKYPVVTEKHVKQKKCVSAYYFIDELCNRLTSQDIIVPESSGGAGEITYQAFKVKKGQKIKNAAGLGSMGFGLPYAIGSCLSNGRKRTILINGDGAFQLNIQELETVKRLNLPIKIFIWNNNGYASIRAMQRNIFEGHYVASEEGSGLTIPNLRKVAEAYEIQTFMARDNEEMVKILPQVLESDGPVLCELMILPEETVSPRVKSVKLENGSMISKPLEDMWPFLSENEINESIFI
>NZ_CP009225.1|WP_033060712.1|3051057_3052185_-|FkbM-family-methyltransferase
MIIESLSEVFEENIKKKVIKKDVIIYGTGTIAKEVYEVLINSKYNVNCFINMNLNYTNEVKGLAKIKRADDNKITSELKEKTTIIISIFNSYADVHTIISQLKKLGFKNIICFTELIDIFENKFKERFYLNKKIDLFKDKEKILHIENIWNDEKSKQLYNSIVKFRLYKDYKYLLAKDSLEEQYLPKDIKKLYNQQNIRFIDCGAFDGDTIKNFLNENKKIDSIIAFEPDMGNYKNLISSIREIKLEHKHSRISAFPCAVYSDTAHLKFNMEGSTGSNISDFGLNIVQCVSIDQCIGDFKPTYIKMDIEGSEYEALLGAKDTIYSSKPNLAICLYHKPNDLYEIPLLINSWNLGYKFYLRMHSYSAFDLVLYAVI
>NZ_CP009225.1|WP_033060709.1|3049389_3050493_-|FkbM-family-methyltransferase
MDKFLKYDDFSNIRTIKNLDKYEKIVLFGAGQTSYETIKLLKEKNIICLFDNDCNKWGTKIKGYKINAPNEITSIVDTKTAIVISSVSYQYEIAEDLIKRFNIKQENIFSYTSEYCEKNIYNIEKIKNNLEKINATINLLEDNESKEYVTNSIMLRLTRNPLYGKSNEKIKKPYEYSDIVFPKKGDYIVDCGAYIGDTAEIFFNKLNGECKIYCIEPFKRSYSKLIDNIISKNMKDRVKCFNYAVSDKKSIDFITCNEDELAVTANIKNKKGIIFNKINMDKLDNILKDIQKINFIKMDIEGEEINALYGSKDIIRKFKPHMMISAYHMVEHIWQIPILLKELNQTYKIYAGHQPNAPFEIEFYIGS
>NZ_CP009225.1|WP_033060705.1|3048487_3049366_-|NAD-dependent-epimerase/dehydratase-family-protein
MKKILITGSNGFIGKNLVDNLSNLYDVCAPKREELDLLNTNIVEKYLKLNKFDVIIHAANTNSTRNIKTTNYEVLDRNLKMFFNLERCKEHYGKMYYFGSGAEYDMNNYRPMMNEEYFGEYIPSDAYGFSKYVMSRISEQDNNIYNLRLFGVFGKYEEWERRFISNAICRCIYDLPITIRQNVYFDYLYVDDLVQIMKFFIENTPKRKHYNVCTGKRIDLLNIAKRIIFVSNKNLDIIIKKNGLKPEYTGSNYRLLDEIGEIKFTPLDVAIERLYEYYLINKNYISIKKMIE
>NZ_CP009225.1|WP_033060730.1|3063172_3063514_-|flagellar-protein-FliT
MDELRSKLIKFREITLNIIDSLEKEDYDSPENLLEERENITKEISNLNYKKEEFKIIGEELELLLIEKKLQNLMIEKKAMIKLKLKEASENKEANKNYSTKQFSTQNILNTKI
>NZ_CP009225.1|WP_033061155.1|3063522_3065976_-|flagellar-filament-capping-protein-FliD
MRLPGLATGMDTDTMIKTMMKPYTMRVDQMKQKSQILLWQQDAYRNVMDGVSNITKKYFDVLNGDNYMLSSKNFSSLKPSGIPDTSNIKINAGSGAISGNYSLKVTELAAKAEAIGNNAVNIKTLSEGDYGIKIDASNNKIVIDGNEITLSGSRYNNVSDIAAEINSKINADGSVLKDTVKAVVKDGSIKIENLFKIDDTNKELKVTVDGKEYTAELAKGNFTLEELTNSINSKLKVAKDTDGNVLPEDKGVKASLSADGKNIEFTGTTSQPNYYVTGVNLGGTAGGSGITGTDVTVASNSITYAKEIIAGFNDTFNVKIGTDASKTVKLAAGTINSVDELKTKLNDAFTTAGLGTALTATVKDGKIVLSSNSDKQVIITGESGKSANSLLGLPDRYEMNTSLSEKMSNIIGGEVKFTINGVDFDYDFTKDYDSTTAPNGAKNKTISQILGDISDKAKVDINYSEINKKFTMRSKEEGTSEKIVASDASGDFLQNLFGNSSISVQGKDAEFNLTTPNGTSTVTKPTNNFTIDGVNYNIEGAKPGEEISFSLSGDTEDSFNKIKGFIEDYNKLVDELQKKLSEKKYRKFEPLTEEQKKDMKENDIKLWEEKAQSGILRNDSDIQNMLSSLRRAFFDSVEGSGLSLKEVGLNTSSDYTQGGKIVFDINIDKDGNNGEARLKKLLKEDPDKVFKIFSKQSDSYPRYTPDLTSTERKQRYNEEGILQRINDIFKDYTRTTKNVNGKMGIFVEKAGIKGTASEINNNLYKELEKREKTIKEMEDRLLERENRYYYQFAQLEKYMSQMNSQSAWLAQQLGGGK
>NZ_CP009225.1|WP_033060731.1|3066003_3066390_-|flagellar-export-chaperone-FliS
MYTANAYNTYKNNSVNFASKDQLLLMLLDGAVKFSKIARQAILDKDIVKAHENLVKTQDIFYELMATLDVNQAETWGHQLMSIYEFIVRRLGEANIKKDTKIMDEVIPLIEDIRDTWYEAEKLSKQMK
>NZ_CP009225.1|WP_003484379.1|3066426_3066726_-|hypothetical-protein
MEFRLNKIDLEVRDKIKEQTKEGKVHSKQNITINKQDRDNNSKDRGFYEQLKKQKKNKNKNIKVKAVKYVKGENLDIEATKEEIEGKATIVGTIIDTKK
>NZ_CP009225.1|WP_030036042.1|3066782_3067139_-|flagellar-protein-FlaG
MEVKAISQGRHQAYNSEIINNDINLDTNVERIKLNEKHTTLDKENTKEVKNSVDKLNKLLEGQDIRLEYEIYGKFRDLTIRLINTKTKEVIKEIPPRKIIDMVAKLCEMAGVLVDEKA
>NZ_CP009225.1|WP_003484377.1|3067154_3067373_-|carbon-storage-regulator-CsrA
MLVITRKKGESFLIGDDIEITVVKLDDGSVKLAIDAPKKLTILRKELYNEVQEENKKATNFNPSILKNIKTK
>NZ_CP009225.1|WP_033060732.1|3067372_3067804_-|flagellar-assembly-protein-FliW
MKLNTKYHGCIEYEERDVIYFQKGIPGFEELKEFIIFPVEDNDVFSVFHSIEKEDMGIIVTSPFNIEKEYEIQLEEEQIKSLKLQDEKDTLVLNTVTLSSDIDKITANLRAPIVINIKEKIGEQIIINSDKYKVKHPLFKEEA
>NZ_CP009225.1|WP_033060733.1|3067908_3068871_-|flagellar-hook-associated-protein-FlgL
MRITNNMMANSFMTDMNNNLENLDRIRQQLTSGKNFSKPSHDPAGVIRSMQLYSGIDANKQYNKNISNVINWLDVTDTALDQVGKQLGKIRDKLEEAGNPGFGPTERKALKDEVNGIIASMSQTLNTTFDGKYIFSGTRVTGKPTGVQKDGTTKNNSIDYVNKDGSMPLDPAGDEYKQMEQKLKAEISEGVVMEYNVTATEVLEGGGDLRQYLENIVNHLDSDDPNEISKLYGDDLGNIDKALDNVLRIRAEVGAKQNRMDAAKEMNKETNFNMTEILSNIEDVNLVEKNMEYAILQSVYISSLQTSAKVLQPTLMDYLR
>NZ_CP009225.1|WP_033060734.1|3069010_3070876_-|flagellar-hook-associated-protein-FlgK
MSGLFGTLNIGKSGMFAQQGAINTTSHNIANANTEGYSRQRVELQTTRPYCKPSMNSAAGPGQVGTGVQIVAINRVRDSFLDYQTRVELGVQGHFSSRHKFLSQIENILNEPTDVGISKLFGKFFDAWHDLSLNAQGSNAKSVVMEQASALADELNHTFNELSKLKENTQREIQQTVFEVNSILNQLNQLNQEIVQVKVAGQQPNDLMDRRDLLLDKLSAKFGIEIDKENFEGINLSTSNHAKDYQDKTSPFGGTPPQIQGKDGKFYDANLVQRVNPEDVYRFSYIKDITPKDKQKLGGNGKYEVTYYVGGDTKSEDNKRTITVTINSEEEFKRLDEGRVLWTDKNGDVVKIPNNSSPDEKDNQSTETIKNNGSCDFTNLKLFEPPSGELKGQMSVQEEIDNYQEQLNKLAKALAFSVNAIHTQSLDPANPKDKALNFFINGENPNNEMEITAGNIALNKAIKENPMKIIAGVTPNSGEGDGKRALAISQIKDVFMSIQDIKKDTDRKKFLEKFFAPNDEFQFNGITLDTIGKDTNGMTMNTYFNDIIGGLGVDEAEAKRMVKNQATLLAGFQQSRDSVSGVSLDEEFANLVQFNHCYQANAKIISTVDQLLDVVINGLKK
>NZ_CP009225.1|WP_033060735.1|3071070_3071475_-|flagellar-protein-FlgN
MEEKIKQSLKEEIKVLKELLNLLDDQHEFISFKKTFELDKIAIDIEEKCKELAHKEMARRNLIGNTSMKEFIANTKDEELKSVYKEATDLLEEIKLQKDSNDMLIKQVISLTTNMLSILNPDRTPKTYGPYGRR

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Crispr_ID: NZ_CP009225_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009225_2

3122361-3122532

Orphan

Consensus_repeat	Method
TTTTGTACTTTTTGTACATATAATTAAGGACTAT	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP009225_2

>merge|NZ_CP009225|2|3122361-3122532|PILER-CR
ATATAATTAAGGACTATAGTTTTTTCCATTTATTATCAATAAACAAAAAAACACCTTATTTAAGGTGCTTTTGTACTTTTTGTACATATTTTTTTATATTTAATTTGATTTTTGAAATAAATAAACTGTAAAAAGTATTTTTGTACTTTTTGTATATATAATTAAGTACTAT

>NZ_CP009225|2|1|3122361-3122532|PILER-CR
ATATAATTAAGGACTATAGTTTTTTCCATTTATT	ATCAATAAACAAAAAAACACCTTATTTAAGGTGCTTTTGTACTTTTTGTAC
ATATTTTTTTATATTTAATTTGATTTTTGAAATA	AATAAACTGTAAAAAGTATTTTTGTACTTTTTGTATATATAATTAAGTA
CTAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009225.1\|WP_003494472.1\|3119914_3120331_-\|flavodoxin	unknown	unknown	gnl\|CDD\|235508
NZ_CP009225.1\|WP_003494483.1\|3129417_3130494_-\|ABC-transporter-permease	unknown	unknown	unknown
NZ_CP009225.1\|WP_003361249.1\|3131379_3131760_-\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224639
NZ_CP009225.1\|WP_003494460.1\|3115277_3115628_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009225.1\|WP_003494456.1\|3113522_3113900_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009225.1\|WP_003494486.1\|3131926_3132442_-\|VanZ-family-protein	unknown	unknown	gnl\|CDD\|377417
NZ_CP009225.1\|WP_003494479.1\|3126906_3127611_-\|aquaporin-family-protein	unknown	unknown	gnl\|CDD\|223653
NZ_CP009225.1\|WP_003494488.1\|3132872_3134585_+\|hydroxylamine-reductase	unknown	unknown	gnl\|CDD\|235391
NZ_CP009225.1\|WP_003494458.1\|3114092_3115265_+\|cation:proton-antiporter	unknown	unknown	gnl\|CDD\|366411
NZ_CP009225.1\|WP_003494465.1\|3116146_3117040_+\|polysaccharide-deacetylase	unknown	unknown	gnl\|CDD\|200569
NZ_CP009225.1\|WP_003494481.1\|3128586_3129273_-\|VanZ-family-protein	unknown	unknown	gnl\|CDD\|377417
NZ_CP009225.1\|WP_033060763.1\|3122658_3124725_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|225117
NZ_CP009225.1\|WP_003494485.1\|3130477_3131374_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP009225.1\|WP_003484279.1\|3128152_3128473_+\|YbjQ-family-protein	unknown	unknown	gnl\|CDD\|376657
NZ_CP009225.1\|WP_158083313.1\|3117061_3117238_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|240539
NZ_CP009225.1\|WP_003494477.1\|3125119_3126616_-\|glycerol-kinase-GlpK	unknown	unknown	gnl\|CDD\|234594
NZ_CP009225.1\|WP_003494474.1\|3120597_3122019_-\|MATE-family-efflux-transporter	unknown	unknown	gnl\|CDD\|240548
NZ_CP009225.1\|WP_003494463.1\|3115890_3116127_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379655
NZ_CP009225.1\|WP_003494471.1\|3118578_3119559_-\|UDP-glucose-4-epimerase-GalE	unknown	unknown	gnl\|CDD\|224012
NZ_CP009225.1\|WP_003494468.1\|3117251_3118541_-\|DUF5050-domain-containing-protein	unknown	unknown	gnl\|CDD\|379846

Protein	Function_ID	Function_description	E-value
NZ_CP009225.1\|WP_003494472.1\|3119914_3120331_-\|flavodoxin	gnl\|CDD\|235508	PRK05568, PRK05568, flavodoxin; Provisional.	2.73463e-67
NZ_CP009225.1\|WP_003494485.1\|3130477_3131374_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	2.06992e-72
NZ_CP009225.1\|WP_003361249.1\|3131379_3131760_-\|GntR-family-transcriptional-regulator	gnl\|CDD\|224639	COG1725, COG1725, Predicted transcriptional regulators [Transcription].	1.90652e-42
NZ_CP009225.1\|WP_003494479.1\|3126906_3127611_-\|aquaporin-family-protein	gnl\|CDD\|223653	COG0580, GlpF, Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism].	2.16719e-75
NZ_CP009225.1\|WP_003494488.1\|3132872_3134585_+\|hydroxylamine-reductase	gnl\|CDD\|235391	PRK05290, PRK05290, hybrid cluster protein; Provisional.	0
NZ_CP009225.1\|WP_003494458.1\|3114092_3115265_+\|cation:proton-antiporter	gnl\|CDD\|366411	pfam00999, Na_H_Exchanger, Sodium/hydrogen exchanger family. Na/H antiporters are key transporters in maintaining the pH of actively metabolising cells. The molecular mechanisms of antiport are unclear. These antiporters contain 10-12 transmembrane regions (M) at the amino-terminus and a large cytoplasmic region at the carboxyl terminus. The transmembrane regions M3-M12 share identity with other members of the family. The M6 and M7 regions are highly conserved. Thus, this is thought to be the region that is involved in the transport of sodium and hydrogen ions. The cytoplasmic region has little similarity throughout the family.	1.80328e-21
NZ_CP009225.1\|WP_003494465.1\|3116146_3117040_+\|polysaccharide-deacetylase	gnl\|CDD\|200569	cd10944, CE4_SmPgdA_like, Catalytic NodB homology domain of Streptococcus mutans polysaccharide deacetylase PgdA, Bacillus subtilis YheN, and similar proteins. This family is represented by a putative polysaccharide deacetylase PgdA from the oral pathogen Streptococcus mutans (SmPgdA) and Bacillus subtilis YheN (BsYheN), which are members of the carbohydrate esterase 4 (CE4) superfamily. SmPgdA is an extracellular metal-dependent polysaccharide deacetylase with a typical CE4 fold, with metal bound to a His-His-Asp triad. It possesses de-N-acetylase activity toward a hexamer of chitooligosaccharide N-acetylglucosamine, but not shorter chitooligosaccharides or a synthetic peptidoglycan tetrasaccharide. SmPgdA plays a role in tuning cell surface properties and in interactions with (salivary) agglutinin, an essential component of the innate immune system, most likely through deacetylation of an as-yet-unidentified polysaccharide. SmPgdA shows significant homology to the catalytic domains of peptidoglycan deacetylases from Streptococcus pneumoniae (SpPgdA) and Listeria monocytogenes (LmPgdA), both of which are involved in the bacterial defense mechanism against human mucosal lysozyme. The Bacillus subtilis genome contains six polysaccharide deacetylase gene homologs: pdaA, pdaB (previously known as ybaN), yheN, yjeA, yxkH and ylxY. The biological function of BsYheN is still unknown. This family also includes many uncharacterized polysaccharide deacetylases mainly found in bacteria.	5.77933e-82
NZ_CP009225.1\|WP_003494481.1\|3128586_3129273_-\|VanZ-family-protein	gnl\|CDD\|377417	pfam04892, VanZ, VanZ like family. This family contains several examples of the VanZ protein, but also contains examples of phosphotransbutyrylases.	2.37442e-18
NZ_CP009225.1\|WP_033060763.1\|3122658_3124725_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	1.01494e-24
NZ_CP009225.1\|WP_003494486.1\|3131926_3132442_-\|VanZ-family-protein	gnl\|CDD\|377417	pfam04892, VanZ, VanZ like family. This family contains several examples of the VanZ protein, but also contains examples of phosphotransbutyrylases.	3.36239e-18
NZ_CP009225.1\|WP_003484279.1\|3128152_3128473_+\|YbjQ-family-protein	gnl\|CDD\|376657	pfam01906, YbjQ_1, Putative heavy-metal-binding. From comparative structural analysis, this family is likely to be a heavy-metal binding domain. The domain oligomerizes as a pentamer. The domain is about 100 amino acids long and is found in prokaryotes.	9.54883e-47
NZ_CP009225.1\|WP_158083313.1\|3117061_3117238_-\|hypothetical-protein	gnl\|CDD\|240539	cd13134, MATE_like_8, Uncharacterized subfamily of the multidrug and toxic compound extrusion (MATE) proteins. The integral membrane proteins from the MATE family are involved in exporting metabolites across the cell membrane and are responsible for multidrug resistance (MDR) in many bacteria and animals. A number of family members are involved in the synthesis of peptidoglycan components in bacteria.	3.1628e-05
NZ_CP009225.1\|WP_003494477.1\|3125119_3126616_-\|glycerol-kinase-GlpK	gnl\|CDD\|234594	PRK00047, glpK, glycerol kinase GlpK.	0
NZ_CP009225.1\|WP_003494474.1\|3120597_3122019_-\|MATE-family-efflux-transporter	gnl\|CDD\|240548	cd13143, MATE_MepA_like, Subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins similar to Streptococcus aureus MepA. The integral membrane proteins from the MATE family are involved in exporting metabolites across the cell membrane and are responsible for multidrug resistance (MDR) in many bacteria and animals. This subfamily includes Streptococcus aureus MepA and Vibrio vulnificus VmrA and functions most likely as a multidrug efflux pump.	6.71787e-101
NZ_CP009225.1\|WP_003494463.1\|3115890_3116127_+\|hypothetical-protein	gnl\|CDD\|379655	pfam14584, DUF4446, Protein of unknown function (DUF4446). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 165 and 176 amino acids in length.	0.00542165
NZ_CP009225.1\|WP_003494471.1\|3118578_3119559_-\|UDP-glucose-4-epimerase-GalE	gnl\|CDD\|224012	COG1087, GalE, UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane].	0
NZ_CP009225.1\|WP_003494468.1\|3117251_3118541_-\|DUF5050-domain-containing-protein	gnl\|CDD\|379846	pfam16472, DUF5050, Domain of unknown function (DUF5050).	2.96251e-40

>NZ_CP009225.1|WP_003494474.1|3120597_3122019_-|MATE-family-efflux-transporter
MGIDYKLFSKEKVEKALLKFAVPAMISLLVMELYNMVDTFFVGLAIGPKAIGALTIAFPVQRLMSSLGMMIAVGASTAVARSLGKKDYDNLKSVILNAINITIVIMVVLTLIISIFKKDMITGLLGASQSIYPYAEKYISIVVLGGLFQALTLVICYIMTSLGYTNITLKATSVGAILNVIIDYFLVMHLNFGVAGAAIATVVSQTVALVYAIYKLNKVKKKIGLNLKLNFELKLDILKPILAVGFSTFIIEISDAVVAVILNNILSIYGGDKALIIVGVTTKISMFLFITVIGISSAMQPIAAFNYGAKDLVRVKEVVVKTIVAVTGATLILWAVMLIFANPIIGLFLKDTSLLVETVKAFRIIISLFPTIGIYYVSIYYYQSMGKARTSLILSVYRQMIIFIPLLFILVGKFNIMGAWIAYPISDLISAITGVIYVRVALKEKDKAIEAQQYEKERKEKAFKGRSVKVGGL
>NZ_CP009225.1|WP_003494472.1|3119914_3120331_-|flavodoxin
MAKVNIIYWSGTGNTEKMAEAIKEGLASAEVKLLSVSDATTKDVEEAEVVVLGCPSMGDEVLEEGEMEPFVDSISNIVKGKKVALFGSYGWGDGQWMRDWEERMESYGAEIKAESLIHQGEPDDSTIEECKAFAQRLV
>NZ_CP009225.1|WP_003494471.1|3118578_3119559_-|UDP-glucose-4-epimerase-GalE
MAVLVCGGAGYIGSHAVAGLIEKNEEVVIVDNLVTGHEQAICGGKFYKGDLRDKEFLNKVFVQNKIDEVIHFAAFSLVGESMEEPFKYYNNNVCGTLSLLETMKEHNVHKIVFSSTAATYGEPENIPILEENLTGPTNAYGETKLAVEKMLKWAEIAYNIKYVVLRYFNVAGAHESGNIGEAHKVESHLIPIILQVALGRREKIMIYGDDYNTKDGSCVRDYIHVMDLVEAHIIALEKLRRDNTSATYNLGNGEGFSVKEVIEICRKVTGHIIPSEIAARRSGDPAILIASSEKIMKELGWKPKKASLESIIHSAWNWHKSHPNGY
>NZ_CP009225.1|WP_003494468.1|3117251_3118541_-|DUF5050-domain-containing-protein
MEDKFVDLNLKFNEEIDEKSIHSNILVVKDTRGNIVTSHIKVEQKNILNIKIKADEEYIDNEYMLEFKDCIYSKNGNAFKELDNIKFCLNKGKIENNGTRVVKEDNWIYYSGNEKIYTYMDYNPHGEIRKVNLDGSLNIKLCDDFASNIWINGQWVYYVNHKGGNEENCLYRIKKDGSSRERLTNTTIDSLVFSDNYIFYSEYISSSSKDNYKIYRIKKDGSNKIALSNVRGTNLIIQGPFLYYLNIEDNYSIYRIRVDGLDMKKINNYSSRNFMKIQDGWIYYINEELGNNLYRITLDGNYEERLNNDSCINAVMDNRRIYYGKDIDSEKTYLYRINIDGLERKKICEGDCSRAIVLTRDNIYFSGNSKEGIYKIRKEGGELCTITKDNVLGLDIVGHWIYYYKLNLEELSMKLHRINLYLNKKQEVL
>NZ_CP009225.1|WP_158083313.1|3117061_3117238_-|hypothetical-protein
MLCEKSCFKIFIEALLGAFVLKLPVYWVVALSTAEELSKFVIGLKRLKSNKWIRNVTV
>NZ_CP009225.1|WP_003494465.1|3116146_3117040_+|polysaccharide-deacetylase
MRNSRKNIYSKKRHHDLRNTVTICLLFFSIISTFITGGRLLKVKIQNNMLGKKITNMSSENKNIKNENIKLMSDIDKENETYKEKMKHIKIAYLTFDDGPSKNTKEILKILKENNVRATFFVNGHPGLEDLYKAIAKDGHVIANHTYSHDYRKVYMSPENFEKDIKKLDKYIEETVGQKPSHIIRYPGGSNNTVSHNYGGPGVMKQIIPYMNNLGYMHFDWNVDSTDASAFRQREDKIINSVLTESRGQHKAVILMHDTDPKTTTVQALPEVIKGLKEQGFIFDVITKDTPQISFTK
>NZ_CP009225.1|WP_003494463.1|3115890_3116127_+|hypothetical-protein
MREKSQSKLILLLTVTVILFIFSFININRVNTYKNKNESLNNNLKILQTENQKLSSEKEQLDKKHKEIKNKVSTLKGV
>NZ_CP009225.1|WP_003494460.1|3115277_3115628_+|hypothetical-protein
MYALVLILNDVKKLHSVNEIFYEENCGATNINSRGLGKILLENNLDVPVFAGLRKLIEGDVPYNKTIISVINSEEKKNIITKRIRNTLDIDNKPGIGFMFVLPVIECFGAKTDHYE
>NZ_CP009225.1|WP_003494458.1|3114092_3115265_+|cation:proton-antiporter
MNPFTGVGIALIVGVLFGKIMNRFKIPAVAGYIIAGLVLGVSGFNLENSVMIEKLSFIGDFALGIIAFNIGSELEVSVIKKLGKPIFIIAFFEAILAFVAVTIITLILGEKIYTALVLGAVASATAPAATVMVLKEMKAKGPLTTTLLGVVAVDDAICLMIYSVASSLAKVFIANKPINAYSIIVPPLAEIFFSLLAGFVLGAILIYILNKCSKDSEIQTLTLGTIIILTGLCIKFNLSSLLASMCLGITVANLSAHNDEVFATIENFASPIITAFFVLAGARLDIKMIPQIGILGVCYLVFRMIGKVSGASLGAKISKAPKTVQKYIGYGLFSQIGVAVGLAIIVSREFKGTGLDTKVLTILLATTIITEIIGPLSTKTAIIKAKEANI
>NZ_CP009225.1|WP_003494456.1|3113522_3113900_-|hypothetical-protein
MRYILAQYILIIILIIAIGYFLYLIKNRSDDYLENYYGLSDIIINTDYEEEKNRENIKIILRAIASSVYYVEKNFKKEPNNIKENKALEKVEETLKEYKFKGKINEDTLRYLIRINCALMNELYK
>NZ_CP009225.1|WP_033060763.1|3122658_3124725_-|helix-turn-helix-domain-containing-protein
MPREFVEYTNDLPIKVSMQNIKKSPIHWHNAMEIIYVLEGSIKITIETESHRVNKQEIGIINPEEAHSIKSITNNNKVLIFQIDTSFFNKYYDIENMFFYTDFSAPEAQKHEKYDILRKYLSTMLCEIAQKGDNYEDVVEEILVDLLYHLINNFHYLIYDEEELKENEVQFERYDRIIKYIYSNYNNKISIQDIARLEFLSSHYLSNEMKNKVGYSFNDFVNLTRVEEAIKLLLDTDKTISEISEELGFSHTRYFNKHFKKHYKCTPMQYRKKYKVDEETYEKLKLYEKLKLKDAYEYLMHYLEDYPRFNYEGKIIKIHVDLSNDTEELDENWHDIINLGSAKEILKGNHVKLIKEFQKYVECEYAIIQNIFSKDMNVFSTEKDRFFNWYEIRQVFEFIYDLDLKPAILIDSHRYEVEFFLTLFKDFIDYFTDFFGDKEIKKWRFYLKNSLDENKKSLESFLKEYEDIEFINWDLDYKEVNNIYDTAYMVPYILNQYLNKKSNVIFLTTFDEIYGGEYINNELFYGGSGIINRQGIKKPSYYAYYLLSKLGNEVIEKGDGYIITKEDDDIQILVYSHSEELESLISLDDLYKRRGLKETAEKKFSINIAALPYNYKIVTYKIDEGKGSSYNNWLSMGKPKRIDEYERDLLIKSSVPNIKLGFAKKSPIYNIVSKIEGYGAFLFILQRV
>NZ_CP009225.1|WP_003494477.1|3125119_3126616_-|glycerol-kinase-GlpK
MEKYIMSLDQGTTSSRCIIFNKKGEVVSVAQKEFTQIYPKAGWVEHDPLEIWGKQAGVAGEALNIARISPEQIAGIGITNQRETTVVWNKRTGMPVYNAIVWQCRRTAGYCDELREKNIDKTIKEKTGLMLDAYFSATKIKWILDNVEGARELAEKGDLLFGNIDTWLIWNMTKGKVHVTDYTNASRTMLFNIHELKWDEELLEIFDIPKSMLPEVKPSSCVYGETDEILFGVSIPISGDAGDQQAALFGQTCFNAGMAKNTYGTGCFLLMNTGEKAVDSKNGLLTTIAVGIDGKVEYALEGSVFIGGAVIQWLRDELRMIKTAQETEKYATAVEDNNGVYLVPAFVGIGAPYWDSYARGTILGLTRGAKKEHIIRAALESMAYQTHDVLKAMEEDSGIELKALKVDGGACQNNFLMQFQSDILGVQVDRPEVVETTALGAAYLAGLAVGYWKDRNEVSQNWAISKSFDPAMEDEKKEKLIKGWHKAVTKSMDWEEKE
>NZ_CP009225.1|WP_003494479.1|3126906_3127611_-|aquaporin-family-protein
MSIYMAEFLGTMMLIWLGDGVVASVALNKSKGKDGGWIVVTAAWGLAVAIPAYIFGGISGAHMNPAVTVGNAIAGNFPWANVAGYVIAQMLGGFAGAVLVWLTYLPHWKATEDKATKLGVFCTAPAIRDTKANFITEFLATAFLVFGLMGFGQAKMVDGFGPLTAGAFIFVLGLSLGGPTGYAINPARDLAPRIAHAILPIDGKGDSDWKYAWIPVLGPILGGIAGALLFMLVF
>NZ_CP009225.1|WP_003484279.1|3128152_3128473_+|YbjQ-family-protein
MLITTTNNIEGKQIKQYKGIVCGEVITGVNFLKDFMAGIRDLVGGRSQGYEEELIRARNEAIDEMMDRAASLGCNAIVGVDIDYEVLGQGGGMLMVTASGTGVITE
>NZ_CP009225.1|WP_003494481.1|3128586_3129273_-|VanZ-family-protein
MQGIEILLRNVIISIIIILILLKINKKQQNKKGHIIGVLFFIFIMNVIFGLTGISPISGFHTDIRIDEISYIPVVSTLGMVKEVFNTGVVENIPRNETILYLGANIFGNILMFGPLGLLLPLLWRYFRKFWKTVLFGFLVSFTIEFSQLFLARGTDIDDLILNTIGTMLGYLTFVVFHKLFPKFTEKFTVEHGVEKLLWNILPVICVIIPYLVTVILGFYDRAILLAR
>NZ_CP009225.1|WP_003494483.1|3129417_3130494_-|ABC-transporter-permease
MKSLFRDSLFYKEWKNSKWICLLMTLILFWDKPNNVFGDLSRQKYEMIIDKNFVLDKMWFNQSLLGWNSGKNILILGVITLLCILLFKGEKQSSTCDLLHSMPFTRKDIIVSKIKVGILTITIPFLVNFIIMTFFYFNNKSYIGSFYSDIPKFYSINLLFCLFFFIFLVFMQSIVGQYFAAAVIAPITLFVPNVVAAYIVDLIRLSKGLRYDSPKLMALDQFVRNLNIYDIVNTKALERVEKGPDGEQMRDIDRFIYENFDIKIMILIILIVVFAILSVIIYNRIKLERINQLIIFKPVETVFKLGVAICVGMIFSQIFGYPKGREEIANMPLIYITLLIGTIIGYFISKLIVKFCSK
>NZ_CP009225.1|WP_003494485.1|3130477_3131374_-|ABC-transporter-ATP-binding-protein
MISISNVSKMLGDKKALNNINLNIEKGSIFGVIGENGAGKTTLIKCMLGIYKQDEGEIKIDGEPVFENTLVKGKIGYVAAEIQYYSSFKVKELVKFYTLTYSTFSHERFKELNKIFKIPENKRIRELSKGMKMRVSLMLNLSIYPEILILDEPTSGLDPIIKRKLINILLEEVSERNTTIFIASHHLDDLERICDSVAIIEKGKIKYANNIEDMKKYIKKLQVLFKDENKTEEIKAWDEIMTVENVGRINYLITNNYSDELQEKLIKSGAEFVEEIDLSLEDMFIYSMEGGKENEKLI
>NZ_CP009225.1|WP_003361249.1|3131379_3131760_-|GntR-family-transcriptional-regulator
MINIDSRSSKPIYEQIIDGIKENVIRGILKPGDKLPSVRELAVMITTNPNTVSKAYKELEREKIIEVLRGKGTYISDFNPREDEEKMSFLRKELKQLLIEAQYMGIDKKEFLKLIEEIYEDLDGKR
>NZ_CP009225.1|WP_003494486.1|3131926_3132442_-|VanZ-family-protein
MKKKIINILFTVGFVFYILFLLWNIPFKYVSPIEVFSTNRYFSRTLNLIPFYDIFNGNYNSLDIWGNIILFIPLGIYMNIINKYNAIYKRIYKIFAISLIFEASQYIFGIGASDITDIITNTIGGIIGIGIYMVIERVFKEDKKVKNFITICSIVIMIPVAILLIGIYIYN
>NZ_CP009225.1|WP_003494488.1|3132872_3134585_+|hydroxylamine-reductase
MSMFCYQCQEAAGGRGCTVKGVCGKTEDIAKTQDLIIYVVKGIAIYSSQAREIGLNTSEADKFIVESLFSTITNANFDGKALNARVQKGLKIRQNLKDAIIKAGGSYNSKENKSWTSKFLSVLGIKNDKDEKEIHDAAVWAANNPEDFKKKAETVGVLATENEDIRSLRELLTYGLKGMAAYLEHANNLGYDENSIHAFMAKALVATLDDTLSADELTALVLECGKYGVDVMALLDKANTSTYGNPEITKVNIGVRNNPGILISGHDLKDMEELLKQTEGTGVDVYTHSEMLPANYYPAFKKYKHFVGNYGNAWWKQNEEFEAFNGPILMTTNCIVTPKASYKDRMYTTGVTGFEGVKHINPSKDGKKDFSEIIEHAKRCSSPKEIEKGEIIGGFAHNQVLALAPQVVDAVKTGAIKRFFVMAGCDGRMKSRNYYTDFAKSLPKDTVILTAGCAKYKYNKLDLGDINGIPRVLDAGQCNDSYSLAVIALKLKEVFELEDINELPISYNIAWYEQKAVIVLLALLHLGVKNIHLGPTLPAFLSPNVAKILVENFGIGTISSVDEDIKMFMN

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP009225_1	1.1\|3063088\|33\|NZ_CP009225\|CRISPRCasFinder	3063088-3063120	33	NZ_LR215032	Mycoplasma gallopavonis strain NCTC10186 plasmid 2	78236-78268	5	0.848
NZ_CP009225_1	1.1\|3063088\|33\|NZ_CP009225\|CRISPRCasFinder	3063088-3063120	33	NZ_AP014830	Geminocystis sp. NIES-3709 plasmid pGM3709_09, complete sequence	1177-1209	7	0.788
NZ_CP009225_1	1.1\|3063088\|33\|NZ_CP009225\|CRISPRCasFinder	3063088-3063120	33	NZ_CP045273	Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence	542148-542180	8	0.758
NZ_CP009225_1	1.1\|3063088\|33\|NZ_CP009225\|CRISPRCasFinder	3063088-3063120	33	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	350196-350228	8	0.758
NZ_CP009225_1	1.1\|3063088\|33\|NZ_CP009225\|CRISPRCasFinder	3063088-3063120	33	NZ_CP031072	Bacillus mycoides strain BPN401 plasmid pl395, complete sequence	228325-228357	8	0.758
NZ_CP009225_1	1.1\|3063088\|33\|NZ_CP009225\|CRISPRCasFinder	3063088-3063120	33	NZ_CP039703	Clostridium butyricum strain 29-1 plasmid p-butyl_plas_29-1, complete sequence	265940-265972	9	0.727
NZ_CP009225_1	1.1\|3063088\|33\|NZ_CP009225\|CRISPRCasFinder	3063088-3063120	33	NZ_AP019717	Clostridium butyricum strain NBRC 13949 plasmid pCBU1, complete sequence	463092-463124	9	0.727
NZ_CP009225_1	1.1\|3063088\|33\|NZ_CP009225\|CRISPRCasFinder	3063088-3063120	33	LR595862	Escherichia virus Lambda_2H10 genome assembly, chromosome: 1	41901-41933	9	0.727
NZ_CP009225_1	1.1\|3063088\|33\|NZ_CP009225\|CRISPRCasFinder	3063088-3063120	33	NZ_CP040905	Enterococcus faecium strain N56454 plasmid unnamed, complete sequence	28865-28897	9	0.727
NZ_CP009225_1	1.1\|3063088\|33\|NZ_CP009225\|CRISPRCasFinder	3063088-3063120	33	NC_013392	Staphylococcus epidermidis plasmid SAP108D, complete sequence	1578-1610	9	0.727
NZ_CP009225_1	1.1\|3063088\|33\|NZ_CP009225\|CRISPRCasFinder	3063088-3063120	33	NC_022111	Prevotella sp. oral taxon 299 str. F0039 plasmid, complete sequence	1018257-1018289	9	0.727
NZ_CP009225_1	1.1\|3063088\|33\|NZ_CP009225\|CRISPRCasFinder	3063088-3063120	33	NZ_CP034948	Enterococcus faecium strain NM213 plasmid unnamed5, complete sequence	107636-107668	9	0.727
NZ_CP009225_1	1.1\|3063088\|33\|NZ_CP009225\|CRISPRCasFinder	3063088-3063120	33	NC_029073	Geobacillus virus E3, complete genome	17231-17263	9	0.727
NZ_CP009225_1	1.1\|3063088\|33\|NZ_CP009225\|CRISPRCasFinder	3063088-3063120	33	NC_029073	Geobacillus virus E3, complete genome	52290-52322	9	0.727
NZ_CP009225_1	1.1\|3063088\|33\|NZ_CP009225\|CRISPRCasFinder	3063088-3063120	33	NZ_CP037749	Campylobacter helveticus strain 2013D-9613 plasmid unnamed1	48195-48227	10	0.697
NZ_CP009225_1	1.1\|3063088\|33\|NZ_CP009225\|CRISPRCasFinder	3063088-3063120	33	NZ_CP020479	Campylobacter helveticus strain ATCC 51209 plasmid pHELV-1, complete sequence	18810-18842	10	0.697
NZ_CP009225_1	1.1\|3063088\|33\|NZ_CP009225\|CRISPRCasFinder	3063088-3063120	33	NC_008014	Lawsonia intracellularis PHE/MN1-00 plasmid 3, complete sequence	57699-57731	10	0.697
NZ_CP009225_1	1.1\|3063088\|33\|NZ_CP009225\|CRISPRCasFinder	3063088-3063120	33	NC_008014	Lawsonia intracellularis PHE/MN1-00 plasmid 3, complete sequence	76012-76044	10	0.697
NZ_CP009225_1	1.1\|3063088\|33\|NZ_CP009225\|CRISPRCasFinder	3063088-3063120	33	NC_020130	Lawsonia intracellularis N343 plasmid 3, complete sequence	57730-57762	10	0.697
NZ_CP009225_1	1.1\|3063088\|33\|NZ_CP009225\|CRISPRCasFinder	3063088-3063120	33	NC_020130	Lawsonia intracellularis N343 plasmid 3, complete sequence	76039-76071	10	0.697
NZ_CP009225_1	1.1\|3063088\|33\|NZ_CP009225\|CRISPRCasFinder	3063088-3063120	33	NZ_MK275622	Clostridium perfringens strain JXJA17 plasmid p4, complete sequence	29835-29867	10	0.697
NZ_CP009225_1	1.1\|3063088\|33\|NZ_CP009225\|CRISPRCasFinder	3063088-3063120	33	MN862347	Sedum sarmentosum microvirus strain pt150-mic-1, complete genome	1326-1358	10	0.697
NZ_CP009225_1	1.1\|3063088\|33\|NZ_CP009225\|CRISPRCasFinder	3063088-3063120	33	NC_029073	Geobacillus virus E3, complete genome	17711-17743	10	0.697
NZ_CP009225_1	1.1\|3063088\|33\|NZ_CP009225\|CRISPRCasFinder	3063088-3063120	33	MK250029	Prevotella phage Lak-C1, complete genome	460734-460766	11	0.667
NZ_CP009225_1	1.1\|3063088\|33\|NZ_CP009225\|CRISPRCasFinder	3063088-3063120	33	NZ_CP014236	Moraxella osloensis strain CCUG 350 plasmid unnamed3, complete sequence	16297-16329	11	0.667

1. spacer 1.1|3063088|33|NZ_CP009225|CRISPRCasFinder matches to NZ_LR215032 (Mycoplasma gallopavonis strain NCTC10186 plasmid 2) position: , mismatch: 5, identity: 0.848

ccttttttatatttttataacttatttatttgc-	CRISPR spacer
gcttttttatattttattaactta-ttatttaca	Protospacer
 **************  ******* ******.*

2. spacer 1.1|3063088|33|NZ_CP009225|CRISPRCasFinder matches to NZ_AP014830 (Geminocystis sp. NIES-3709 plasmid pGM3709_09, complete sequence) position: , mismatch: 7, identity: 0.788

ccttttttatatttttataacttatttatttgc	CRISPR spacer
tttagtatatatttgtataacttatttattagc	Protospacer
..*  * ******* *************** **

3. spacer 1.1|3063088|33|NZ_CP009225|CRISPRCasFinder matches to NZ_CP045273 (Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence) position: , mismatch: 8, identity: 0.758

ccttttttatatttttataacttatttatttgc	CRISPR spacer
atccttttatatttttataacgtaattattttt	Protospacer
 ...***************** ** ****** .

4. spacer 1.1|3063088|33|NZ_CP009225|CRISPRCasFinder matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 8, identity: 0.758

ccttttttatatttttataacttatttatttgc	CRISPR spacer
atatttttatctttttataaattatttataatc	Protospacer
 . ******* ********* ********   *

5. spacer 1.1|3063088|33|NZ_CP009225|CRISPRCasFinder matches to NZ_CP031072 (Bacillus mycoides strain BPN401 plasmid pl395, complete sequence) position: , mismatch: 8, identity: 0.758

ccttttttatatttttataacttatttatttgc	CRISPR spacer
cactttgtatatttttttaacttatttaacttt	Protospacer
* .*** ********* *********** .* .

6. spacer 1.1|3063088|33|NZ_CP009225|CRISPRCasFinder matches to NZ_CP039703 (Clostridium butyricum strain 29-1 plasmid p-butyl_plas_29-1, complete sequence) position: , mismatch: 9, identity: 0.727

ccttttttatatttttataacttatttatttgc	CRISPR spacer
atatttttatctttttataaattatttataatt	Protospacer
 . ******* ********* ********   .

7. spacer 1.1|3063088|33|NZ_CP009225|CRISPRCasFinder matches to NZ_AP019717 (Clostridium butyricum strain NBRC 13949 plasmid pCBU1, complete sequence) position: , mismatch: 9, identity: 0.727

ccttttttatatttttataacttatttatttgc	CRISPR spacer
atatttttatctttttataaattatttataatt	Protospacer
 . ******* ********* ********   .

8. spacer 1.1|3063088|33|NZ_CP009225|CRISPRCasFinder matches to LR595862 (Escherichia virus Lambda_2H10 genome assembly, chromosome: 1) position: , mismatch: 9, identity: 0.727

ccttttttatatttttataacttatttatttgc	CRISPR spacer
tattttttatattttaataacatatttaaagca	Protospacer
. ************* ***** ******

9. spacer 1.1|3063088|33|NZ_CP009225|CRISPRCasFinder matches to NZ_CP040905 (Enterococcus faecium strain N56454 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.727

ccttttttatatttttataacttatttatttgc	CRISPR spacer
gattttttatttttttttaacttattaacgcga	Protospacer
  ******** ***** ********* *. .*

10. spacer 1.1|3063088|33|NZ_CP009225|CRISPRCasFinder matches to NC_013392 (Staphylococcus epidermidis plasmid SAP108D, complete sequence) position: , mismatch: 9, identity: 0.727

ccttttttatatttttataacttatttatttgc	CRISPR spacer
acttttttatatttaaataacttatgaaaagcc	Protospacer
 *************  *********  *    *

11. spacer 1.1|3063088|33|NZ_CP009225|CRISPRCasFinder matches to NC_022111 (Prevotella sp. oral taxon 299 str. F0039 plasmid, complete sequence) position: , mismatch: 9, identity: 0.727

ccttttttatatttttataacttatttatttgc	CRISPR spacer
tttctattttatttttataagttatttattatg	Protospacer
..*.* ** *********** *********

12. spacer 1.1|3063088|33|NZ_CP009225|CRISPRCasFinder matches to NZ_CP034948 (Enterococcus faecium strain NM213 plasmid unnamed5, complete sequence) position: , mismatch: 9, identity: 0.727

ccttttttatatttttataacttatttatttgc	CRISPR spacer
gattttttatttttttttaacttattaacgcga	Protospacer
  ******** ***** ********* *. .*

13. spacer 1.1|3063088|33|NZ_CP009225|CRISPRCasFinder matches to NC_029073 (Geobacillus virus E3, complete genome) position: , mismatch: 9, identity: 0.727

ccttttttatatttttataacttatttatttgc	CRISPR spacer
aatattttttatttttataaattatttaaataa	Protospacer
  * **** *********** *******  *.

14. spacer 1.1|3063088|33|NZ_CP009225|CRISPRCasFinder matches to NC_029073 (Geobacillus virus E3, complete genome) position: , mismatch: 9, identity: 0.727

ccttttttatatttttataacttatttatttgc	CRISPR spacer
caacctttatatttttataatttgtttataagg	Protospacer
*  ..***************.**.*****  *

15. spacer 1.1|3063088|33|NZ_CP009225|CRISPRCasFinder matches to NZ_CP037749 (Campylobacter helveticus strain 2013D-9613 plasmid unnamed1) position: , mismatch: 10, identity: 0.697

ccttttttatatttttataacttatttatttgc	CRISPR spacer
gcaattttagattttgataacttatttaaagaa	Protospacer
 *  ***** ***** ************   .

16. spacer 1.1|3063088|33|NZ_CP009225|CRISPRCasFinder matches to NZ_CP020479 (Campylobacter helveticus strain ATCC 51209 plasmid pHELV-1, complete sequence) position: , mismatch: 10, identity: 0.697

ccttttttatatttttataacttatttatttgc	CRISPR spacer
gcaattttagattttgataacttatttaaagaa	Protospacer
 *  ***** ***** ************   .

17. spacer 1.1|3063088|33|NZ_CP009225|CRISPRCasFinder matches to NC_008014 (Lawsonia intracellularis PHE/MN1-00 plasmid 3, complete sequence) position: , mismatch: 10, identity: 0.697

ccttttttatatttttataacttatttatttgc	CRISPR spacer
ttctttttatatttttatatattattttctaaa	Protospacer
...****************  ****** .* .

18. spacer 1.1|3063088|33|NZ_CP009225|CRISPRCasFinder matches to NC_008014 (Lawsonia intracellularis PHE/MN1-00 plasmid 3, complete sequence) position: , mismatch: 10, identity: 0.697

ccttttttatatttttataacttatttatttgc	CRISPR spacer
ttatttttatacttttataacgtatttttactt	Protospacer
.. ********.********* ***** * . .

19. spacer 1.1|3063088|33|NZ_CP009225|CRISPRCasFinder matches to NC_020130 (Lawsonia intracellularis N343 plasmid 3, complete sequence) position: , mismatch: 10, identity: 0.697

ccttttttatatttttataacttatttatttgc	CRISPR spacer
ttctttttatatttttatatattattttctaaa	Protospacer
...****************  ****** .* .

20. spacer 1.1|3063088|33|NZ_CP009225|CRISPRCasFinder matches to NC_020130 (Lawsonia intracellularis N343 plasmid 3, complete sequence) position: , mismatch: 10, identity: 0.697

ccttttttatatttttataacttatttatttgc	CRISPR spacer
ttatttttatacttttataacgtatttttactt	Protospacer
.. ********.********* ***** * . .

21. spacer 1.1|3063088|33|NZ_CP009225|CRISPRCasFinder matches to NZ_MK275622 (Clostridium perfringens strain JXJA17 plasmid p4, complete sequence) position: , mismatch: 10, identity: 0.697

ccttttttatatttttataacttatttatttgc	CRISPR spacer
tcttttttatttttttataactaataatataaa	Protospacer
.********* *********** **    * .

22. spacer 1.1|3063088|33|NZ_CP009225|CRISPRCasFinder matches to MN862347 (Sedum sarmentosum microvirus strain pt150-mic-1, complete genome) position: , mismatch: 10, identity: 0.697

ccttttttatatttttataacttatttatttgc	CRISPR spacer
tacgataaatgttttcataacttatttatttgt	Protospacer
. .  *  **.****.****************.

23. spacer 1.1|3063088|33|NZ_CP009225|CRISPRCasFinder matches to NC_029073 (Geobacillus virus E3, complete genome) position: , mismatch: 10, identity: 0.697

ccttttttatatttttataacttatttatttgc	CRISPR spacer
tacctcctatatttttataatttatttaattag	Protospacer
. ..*..*************.******* **.

24. spacer 1.1|3063088|33|NZ_CP009225|CRISPRCasFinder matches to MK250029 (Prevotella phage Lak-C1, complete genome) position: , mismatch: 11, identity: 0.667

ccttttttatatttttataacttatttatttgc	CRISPR spacer
atagtttaatatttttataaattatttaaaaaa	Protospacer
 .  *** ************ *******   .

25. spacer 1.1|3063088|33|NZ_CP009225|CRISPRCasFinder matches to NZ_CP014236 (Moraxella osloensis strain CCUG 350 plasmid unnamed3, complete sequence) position: , mismatch: 11, identity: 0.667

ccttttttatatttttataacttatttatttgc	CRISPR spacer
ttgcaaaaatatttttataacttacatatttgg	Protospacer
.. .    ****************. ******

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

140071 : 197932

Clostridium_phage(20.0%)

bacteriocin,coat,protease

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_033058130.1\|140071_141082_+\|coat	CotS family spore coat protein	NA	NA	NA	NA
WP_003491819.1\|141096_141291_+	hypothetical protein	NA	NA	NA	NA
WP_003491820.1\|141317_142085_+\|coat	spore coat protein CotS	NA	NA	NA	NA
WP_003491822.1\|142097_143111_+\|coat	CotS family spore coat protein	NA	NA	NA	NA
WP_003491824.1\|143313_144441_-	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_003491826.1\|144557_145562_+\|coat	CotS family spore coat protein	NA	NA	NA	NA
WP_033058127.1\|145685_146588_+	sporulation peptidase YabG	NA	NA	NA	NA
WP_003491830.1\|146783_147020_+	hypothetical protein	NA	NA	NA	NA
WP_033058125.1\|147121_148684_+	DUF3794 domain-containing protein	S6BFI4	Thermus_phage	2.4e-06	50.9
WP_003491834.1\|148881_149682_+	cyanophycinase	NA	NA	NA	NA
WP_003491841.1\|149725_152347_+	cyanophycin synthetase	NA	NA	NA	NA
WP_003491843.1\|152442_153285_+	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	NA	NA	NA	NA
WP_003491845.1\|153444_153642_+	hypothetical protein	NA	NA	NA	NA
WP_033058121.1\|153701_155162_+	spore germination protein	NA	NA	NA	NA
WP_033058119.1\|155181_156285_+	endospore germination permease	NA	NA	NA	NA
WP_003491855.1\|156328_157507_+	Ger(x)C family spore germination protein	NA	NA	NA	NA
WP_033058117.1\|157580_158213_+	stage II sporulation protein R	NA	NA	NA	NA
WP_003491859.1\|158248_159490_-	UDP-glucuronosyltransferase	NA	NA	NA	NA
WP_033058115.1\|159862_161233_+	germination protein YpeB	NA	NA	NA	NA
WP_003491863.1\|161334_162315_+	DUF814 domain-containing protein	NA	NA	NA	NA
WP_003491865.1\|162333_162762_+	DUF1934 domain-containing protein	NA	NA	NA	NA
WP_003491867.1\|162903_163203_+	hypothetical protein	NA	NA	NA	NA
WP_003491869.1\|163439_165041_+	CTP synthase	A0A1J0FA14	Only_Syngen_Nebraska_virus	1.0e-150	50.9
WP_003491871.1\|165294_165639_+	hypothetical protein	NA	NA	NA	NA
WP_003491872.1\|165810_167256_+	transcription termination factor Rho	NA	NA	NA	NA
WP_003487888.1\|167295_167514_-	50S ribosomal protein L31	NA	NA	NA	NA
WP_003491873.1\|167739_168315_+	thymidine kinase	G3MBK1	Bacillus_virus	3.3e-38	44.3
WP_033058111.1\|168331_169249_+	DUF1385 domain-containing protein	NA	NA	NA	NA
WP_003491875.1\|169256_170108_+	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA
WP_171814704.1\|170186_171266_+	peptide chain release factor 1	NA	NA	NA	NA
WP_003491877.1\|171293_171902_+	hypothetical protein	NA	NA	NA	NA
WP_030032874.1\|171961_172681_+	ZIP family metal transporter	NA	NA	NA	NA
WP_033058109.1\|172701_173757_+	threonylcarbamoyl-AMP synthase	S4VW33	Pandoravirus	1.5e-49	37.3
WP_030032878.1\|173766_174219_+	low molecular weight protein arginine phosphatase	NA	NA	NA	NA
WP_003491883.1\|174278_174716_+	ribose 5-phosphate isomerase B	NA	NA	NA	NA
WP_003491885.1\|174745_175375_+	uracil phosphoribosyltransferase	NA	NA	NA	NA
WP_033058106.1\|176064_176337_-	hypothetical protein	NA	NA	NA	NA
WP_033058103.1\|176483_176723_-\|bacteriocin	bacteriocin	NA	NA	NA	NA
WP_033058101.1\|176745_176955_-	hypothetical protein	NA	NA	NA	NA
WP_033058099.1\|177129_179352_+	peptidase domain-containing ABC transporter	W8CYL7	Bacillus_phage	2.6e-51	28.5
WP_033058096.1\|179351_180782_+	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_003491904.1\|181168_181657_+	cytidine deaminase	A0A2H4PI75	Streptomyces_phage	3.1e-13	35.3
WP_003487872.1\|181763_182798_+	undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase	NA	NA	NA	NA
WP_003491906.1\|182811_183969_+	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	A0A1V0SAG5	Catovirus	6.4e-25	28.0
WP_003491908.1\|184455_184824_+	ATP synthase subunit I	NA	NA	NA	NA
WP_003491910.1\|184838_185519_+	F0F1 ATP synthase subunit A	NA	NA	NA	NA
WP_003356112.1\|185558_185798_+	ATP synthase F0 subunit C	NA	NA	NA	NA
WP_033058093.1\|185877_186357_+	F0F1 ATP synthase subunit B	NA	NA	NA	NA
WP_003491914.1\|186359_186899_+	F0F1 ATP synthase subunit delta	NA	NA	NA	NA
WP_003491916.1\|186909_188424_+	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA
WP_003491917.1\|188445_189294_+	F0F1 ATP synthase subunit gamma	NA	NA	NA	NA
WP_003491920.1\|189307_190696_+	F0F1 ATP synthase subunit beta	NA	NA	NA	NA
WP_003491922.1\|190726_191128_+	F0F1 ATP synthase subunit epsilon	NA	NA	NA	NA
WP_003491923.1\|191318_192026_+	YwmB family TATA-box binding protein	NA	NA	NA	NA
WP_003491926.1\|192049_193306_+	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA
WP_033058091.1\|193578_194655_+	stage II sporulation protein D	Q2XU88	Pseudomonas_phage	6.4e-35	36.7
WP_003491929.1\|195054_195801_+	M23 family metallopeptidase	NA	NA	NA	NA
WP_003356559.1\|195908_196163_+	sporulation transcriptional regulator SpoIIID	M9Q261	Clostridium_phage	3.3e-19	60.0
WP_033058088.1\|196262_197291_+	rod shape-determining protein	NA	NA	NA	NA
WP_033058086.1\|197407_197932_-\|protease	spore protease YyaC	A0A0A8WIQ6	Clostridium_phage	7.1e-32	44.6

DBSCAN-SWA_2

2170835 : 2232366

Leptospira_phage(16.67%)

transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_080700086.1\|2170835_2171300_-\|transposase	transposase	S5WIU1	Leptospira_phage	1.8e-10	33.1
WP_080584864.1\|2171333_2171777_-\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_003496236.1\|2171761_2172091_-\|transposase	transposase	NA	NA	NA	NA
WP_033059610.1\|2172494_2173493_+	leucine-rich repeat domain-containing protein	NA	NA	NA	NA
WP_033059611.1\|2173514_2175599_+\|protease	M6 family metalloprotease domain-containing protein	NA	NA	NA	NA
WP_033059613.1\|2175902_2177957_-	sigma 54-interacting transcriptional regulator	NA	NA	NA	NA
WP_033059615.1\|2178209_2178464_-	glutaredoxin	NA	NA	NA	NA
WP_003496232.1\|2178476_2178845_-	RidA family protein	NA	NA	NA	NA
WP_003496231.1\|2178885_2179140_-	glutaredoxin	NA	NA	NA	NA
WP_033059617.1\|2179184_2180456_-	dicarboxylate/amino acid:cation symporter	NA	NA	NA	NA
WP_003496229.1\|2180501_2181671_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
WP_003496228.1\|2181984_2183274_+	serine dehydratase subunit alpha family protein	NA	NA	NA	NA
WP_033059619.1\|2183617_2184613_+	leucine-rich repeat domain-containing protein	NA	NA	NA	NA
WP_003496225.1\|2184633_2186853_+\|protease	M6 family metalloprotease domain-containing protein	NA	NA	NA	NA
WP_003496223.1\|2187083_2188523_-	HAMP domain-containing histidine kinase	W8CYF6	Bacillus_phage	2.5e-26	28.6
WP_033059622.1\|2188512_2189178_-	response regulator transcription factor	NA	NA	NA	NA
WP_003496219.1\|2189555_2190368_-	DUF169 domain-containing protein	NA	NA	NA	NA
WP_003496217.1\|2190390_2191149_-	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA
WP_033059625.1\|2191164_2192598_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	5.5e-18	30.4
WP_003496214.1\|2192600_2193167_-	ECF transporter S component	NA	NA	NA	NA
WP_003496212.1\|2193392_2194460_-	alanine/ornithine racemase family PLP-dependent enzyme	NA	NA	NA	NA
WP_033059628.1\|2194658_2196158_+	spore germination protein	NA	NA	NA	NA
WP_003496210.1\|2196147_2197233_+	GerAB/ArcD/ProY family transporter	NA	NA	NA	NA
WP_033059630.1\|2197315_2198815_+	spore germination protein	NA	NA	NA	NA
WP_003496206.1\|2198807_2199896_+	GerAB/ArcD/ProY family transporter	NA	NA	NA	NA
WP_003496204.1\|2199885_2200998_+	Ger(x)C family spore germination protein	NA	NA	NA	NA
WP_003496203.1\|2201040_2202150_+	endospore germination permease	NA	NA	NA	NA
WP_110093046.1\|2202415_2202748_-	hypothetical protein	NA	NA	NA	NA
WP_003496199.1\|2202777_2203104_-	hypothetical protein	NA	NA	NA	NA
WP_033059635.1\|2203291_2203573_-	hypothetical protein	NA	NA	NA	NA
WP_003496196.1\|2203874_2204303_-	C-GCAxxG-C-C family protein	NA	NA	NA	NA
WP_033059638.1\|2204660_2204993_+	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA
WP_003496193.1\|2205005_2205986_+	arsenosugar biosynthesis radical SAM protein ArsS	NA	NA	NA	NA
WP_003496191.1\|2206285_2207041_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_003496190.1\|2207274_2208705_-	potassium/proton antiporter	NA	NA	NA	NA
WP_003496188.1\|2209226_2211107_-	molecular chaperone HtpG	A0A1B1ISV4	uncultured_Mediterranean_phage	1.5e-79	32.1
WP_033059640.1\|2211645_2213211_+	DNA mismatch repair protein MutS	F2QAF9	Pyramimonas_orientalis_virus	1.2e-13	27.2
WP_003496184.1\|2213687_2215115_+	PTS system trehalose-specific EIIBC component	NA	NA	NA	NA
WP_033059968.1\|2215332_2217012_+	alpha,alpha-phosphotrehalase	NA	NA	NA	NA
WP_003496172.1\|2217032_2217743_+	trehalose operon repressor	NA	NA	NA	NA
WP_003496170.1\|2217951_2218392_-	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_003496169.1\|2218525_2219920_-	PTS transporter subunit EIIC	NA	NA	NA	NA
WP_003496168.1\|2219920_2220844_-	1-phosphofructokinase	NA	NA	NA	NA
WP_003496166.1\|2220863_2221724_-	tagatose bisphosphate family class II aldolase	NA	NA	NA	NA
WP_003496164.1\|2221924_2222662_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
WP_033059644.1\|2222931_2223561_-	CatB-related O-acetyltransferase	A0A1V0SJ47	Klosneuvirus	1.2e-25	42.8
WP_033059646.1\|2223700_2224108_-	YjdF family protein	NA	NA	NA	NA
WP_033059648.1\|2224821_2225823_+	3-deoxy-7-phosphoheptulonate synthase	NA	NA	NA	NA
WP_033059651.1\|2225993_2227364_-	salicylate synthase	NA	NA	NA	NA
WP_003496155.1\|2227669_2228428_-	YoaP domain-containing protein	NA	NA	NA	NA
WP_033059653.1\|2228628_2229498_-	B12-binding domain-containing radical SAM protein	NA	NA	NA	NA
WP_003496151.1\|2229936_2231028_+	glycerol dehydrogenase	NA	NA	NA	NA
WP_033059655.1\|2231439_2232366_-\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_3

2662672 : 2748679

108

Clostridium_phage(45.24%)

holin,capsid,protease,portal,tail,terminase,head,integrase,tRNA

attL 2676498:2676514|attR 2721679:2721695

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_033060189.1\|2662672_2663665_-\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA
WP_033060191.1\|2664046_2664364_-	hypothetical protein	NA	NA	NA	NA
WP_033060193.1\|2664549_2664909_-	DUF1653 domain-containing protein	NA	NA	NA	NA
WP_033060196.1\|2665138_2665555_-	DUF523 domain-containing protein	NA	NA	NA	NA
WP_033060198.1\|2665892_2666708_-	hypothetical protein	NA	NA	NA	NA
WP_050481915.1\|2666854_2667640_-	UPF0489 family protein	NA	NA	NA	NA
WP_033060200.1\|2668144_2671846_-	hypothetical protein	NA	NA	NA	NA
WP_033060202.1\|2672674_2672845_-	hypothetical protein	NA	NA	NA	NA
WP_046340402.1\|2673349_2673703_-	hypothetical protein	NA	NA	NA	NA
WP_050481916.1\|2673716_2675402_-	EndoU domain-containing protein	A0A0A7RVN1	Clostridium_phage	4.3e-30	48.2
2676498:2676514	attL	NA	NA	NA	NA
WP_033060204.1\|2676986_2677172_-	hypothetical protein	NA	NA	NA	NA
WP_033060206.1\|2677355_2677805_-	hypothetical protein	NA	NA	NA	NA
WP_033060209.1\|2678775_2679003_-	DUF2922 domain-containing protein	NA	NA	NA	NA
WP_033060211.1\|2679023_2679245_-	DUF1659 domain-containing protein	NA	NA	NA	NA
WP_033060213.1\|2679488_2680298_-	ATP-binding protein	A6XMI1	Bacillus_virus	2.6e-33	37.3
WP_046340403.1\|2680786_2681392_-	hypothetical protein	NA	NA	NA	NA
WP_152540533.1\|2681436_2682231_-	arsenite methyltransferase	NA	NA	NA	NA
WP_033060216.1\|2682349_2682742_-	winged helix-turn-helix transcriptional regulator	E4ZFI8	Streptococcus_phage	1.2e-07	39.2
WP_003491355.1\|2682951_2683575_-	VanZ family protein	NA	NA	NA	NA
WP_080700109.1\|2684665_2684977_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_033060219.1\|2685338_2685575_+	helix-turn-helix transcriptional regulator	A0A0A7RUG5	Clostridium_phage	1.9e-21	64.1
WP_033060222.1\|2685645_2685927_+	helix-turn-helix transcriptional regulator	A0A0A7S0F1	Clostridium_phage	9.7e-36	82.6
WP_033060224.1\|2685947_2686418_-	DNA-binding protein	NA	NA	NA	NA
WP_033060226.1\|2686586_2687567_-	hypothetical protein	NA	NA	NA	NA
WP_033060228.1\|2687824_2688421_-	hypothetical protein	NA	NA	NA	NA
WP_033060230.1\|2688411_2689638_-	hypothetical protein	Q331T3	Clostridium_botulinum_C_phage	5.8e-24	26.7
WP_158407944.1\|2689634_2689778_-	hypothetical protein	NA	NA	NA	NA
WP_050481917.1\|2689909_2690455_-	hypothetical protein	NA	NA	NA	NA
WP_162835516.1\|2690527_2690668_-	hypothetical protein	NA	NA	NA	NA
WP_033060233.1\|2690786_2690993_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_033060235.1\|2691056_2691302_-	hypothetical protein	NA	NA	NA	NA
WP_033060237.1\|2691317_2691500_-	hypothetical protein	A0A0A7RTH9	Clostridium_phage	1.1e-16	80.7
WP_033060239.1\|2692345_2693515_-	hypothetical protein	NA	NA	NA	NA
WP_050481918.1\|2693548_2694064_-	DUF4065 domain-containing protein	A0A0N9SGM1	Paenibacillus_phage	1.0e-27	40.8
WP_033060241.1\|2695393_2695810_-\|holin	phage holin family protein	D2XPZ9	Bacillus_virus	1.4e-22	41.5
WP_033060243.1\|2696027_2696996_+	hypothetical protein	NA	NA	NA	NA
WP_158407945.1\|2696992_2697151_-	hypothetical protein	NA	NA	NA	NA
WP_110093049.1\|2697196_2697343_-	XkdX family protein	G3MAH0	Bacillus_virus	3.7e-07	55.6
WP_033060246.1\|2697342_2697744_-	hypothetical protein	NA	NA	NA	NA
WP_050481919.1\|2697745_2699461_-	hypothetical protein	E2ELJ8	Clostridium_phage	9.1e-68	56.0
WP_033060248.1\|2699461_2700538_-	siphovirus ReqiPepy6 Gp37-like family protein	E2ELJ7	Clostridium_phage	9.9e-121	60.0
WP_033060250.1\|2700541_2701408_-\|tail	phage tail family protein	E2ELJ6	Clostridium_phage	2.6e-95	59.5
WP_033060253.1\|2701423_2706811_-\|tail	phage tail tape measure protein	E2ELJ5	Clostridium_phage	9.7e-15	43.7
WP_158407946.1\|2706863_2707025_-	hypothetical protein	E2ELJ3	Clostridium_phage	2.3e-05	59.5
WP_033060255.1\|2707072_2707354_-	hypothetical protein	E2ELJ2	Clostridium_phage	9.4e-15	46.3
WP_033060256.1\|2707385_2707967_-	hypothetical protein	NA	NA	NA	NA
WP_033060259.1\|2707969_2708314_-	hypothetical protein	A0A0K2CZA4	Paenibacillus_phage	2.8e-13	38.0
WP_033060261.1\|2708310_2708694_-	HK97 gp10 family phage protein	E2ELI9	Clostridium_phage	1.3e-27	48.6
WP_033060263.1\|2708686_2709013_-\|head	phage head closure protein	A6M954	Geobacillus_virus	3.2e-06	29.1
WP_033060266.1\|2708993_2709323_-\|head,tail	phage gp6-like head-tail connector protein	NA	NA	NA	NA
WP_046340404.1\|2709337_2709439_-	Rho termination factor N-terminal domain-containing protein	NA	NA	NA	NA
WP_033060270.1\|2709533_2710670_-\|capsid	phage major capsid protein	A0A1B1P7R4	Bacillus_phage	4.2e-130	63.8
WP_033060273.1\|2710662_2711415_-\|protease	Clp protease ClpP	A0A2I7SCY8	Paenibacillus_phage	1.6e-72	62.9
WP_033060276.1\|2711404_2712589_-\|portal	phage portal protein	A0A2I6PER5	Staphylococcus_phage	4.5e-58	35.0
WP_033060278.1\|2712604_2714305_-\|terminase	terminase large subunit	A6M948	Geobacillus_virus	1.9e-190	57.7
WP_033060281.1\|2714301_2714766_-\|terminase	phage terminase small subunit P27 family	Q9ZXG2	Bacillus_phage	8.8e-50	61.9
WP_144407839.1\|2714801_2715173_-	hypothetical protein	NA	NA	NA	NA
WP_033060284.1\|2715241_2715715_-	hypothetical protein	A0A0A7RUV1	Clostridium_phage	1.0e-13	39.8
WP_033060286.1\|2715714_2716140_-	hypothetical protein	NA	NA	NA	NA
WP_050481920.1\|2716178_2716598_-	hypothetical protein	NA	NA	NA	NA
WP_033060288.1\|2716644_2716953_-	hypothetical protein	NA	NA	NA	NA
WP_136627629.1\|2716984_2717230_-	hypothetical protein	NA	NA	NA	NA
WP_033060292.1\|2717288_2717636_-	hypothetical protein	NA	NA	NA	NA
WP_033060294.1\|2717777_2717960_-	hypothetical protein	NA	NA	NA	NA
WP_080700104.1\|2718110_2718284_-	hypothetical protein	NA	NA	NA	NA
WP_033060296.1\|2718520_2718973_-	hypothetical protein	A0A0A7RTX6	Clostridium_phage	1.7e-21	39.9
WP_033060298.1\|2718959_2719247_-	hypothetical protein	NA	NA	NA	NA
WP_033060300.1\|2719243_2719435_-	hypothetical protein	NA	NA	NA	NA
WP_012705130.1\|2719523_2719751_-	hypothetical protein	NA	NA	NA	NA
WP_033060302.1\|2719768_2720095_-	hypothetical protein	NA	NA	NA	NA
WP_033060304.1\|2720108_2721104_-\|integrase	tyrosine-type recombinase/integrase	A0A2H4PCY2	Mycobacterium_phage	5.4e-12	30.0
WP_167336337.1\|2721178_2721346_-	hypothetical protein	I1TJZ5	Clostridium_phage	6.6e-16	69.1
WP_167336338.1\|2721599_2721752_-	hypothetical protein	NA	NA	NA	NA
2721679:2721695	attR	NA	NA	NA	NA
WP_033060411.1\|2721779_2722112_-	hypothetical protein	NA	NA	NA	NA
WP_033060307.1\|2722120_2723029_-	hypothetical protein	NA	NA	NA	NA
WP_033060310.1\|2723073_2723703_-	hypothetical protein	A0A0A7RW43	Clostridium_phage	2.4e-82	71.6
WP_033060313.1\|2723690_2724113_-	DUF1064 domain-containing protein	A0A0A7RTV9	Clostridium_phage	7.2e-51	68.6
WP_163253272.1\|2724109_2724271_-	hypothetical protein	NA	NA	NA	NA
WP_163253273.1\|2724361_2724517_-	hypothetical protein	A0A0A7RUB8	Clostridium_phage	2.0e-06	60.0
WP_033060315.1\|2724513_2724705_-	hypothetical protein	NA	NA	NA	NA
WP_033060318.1\|2724724_2725204_-	dUTP diphosphatase	A0A1L2JY27	Aeribacillus_phage	7.2e-15	40.2
WP_033060320.1\|2725203_2725443_-	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	A0A0K2CZ86	Paenibacillus_phage	1.2e-18	57.7
WP_046340405.1\|2725474_2726275_-	ATP-binding protein	D2XQ17	Bacillus_virus	3.3e-36	37.8
WP_049043064.1\|2726237_2727026_-	hypothetical protein	M9Q2G6	Clostridium_phage	2.7e-14	34.8
WP_046340406.1\|2727042_2727258_-	hypothetical protein	NA	NA	NA	NA
WP_167336339.1\|2727410_2727587_-	hypothetical protein	NA	NA	NA	NA
WP_080700106.1\|2727602_2727749_-	hypothetical protein	NA	NA	NA	NA
WP_033060326.1\|2727751_2728609_-	hypothetical protein	E5DV80	Deep-sea_thermophilic_phage	5.6e-58	47.8
WP_033060328.1\|2728620_2729106_-	siphovirus Gp157 family protein	A0A059T5F1	Listeria_phage	6.0e-17	35.8
WP_033060330.1\|2729105_2729417_-	hypothetical protein	NA	NA	NA	NA
WP_033060332.1\|2729661_2730429_-	Rha family transcriptional regulator	A0A0A7RUT3	Clostridium_phage	1.3e-42	51.6
WP_033060334.1\|2730489_2730633_-	hypothetical protein	NA	NA	NA	NA
WP_033060336.1\|2730767_2730956_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_046340407.1\|2731215_2731590_+	helix-turn-helix transcriptional regulator	A0A142LP08	Marinitoga_camini_virus	6.3e-06	36.5
WP_003491353.1\|2733882_2735313_-	adenylosuccinate lyase	NA	NA	NA	NA
WP_003491352.1\|2735575_2735797_+	DUF378 domain-containing protein	NA	NA	NA	NA
WP_003491351.1\|2735824_2736082_-	HPr family phosphocarrier protein	NA	NA	NA	NA
WP_033060337.1\|2736192_2737386_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
WP_003491348.1\|2737419_2737776_-	EamA family transporter	NA	NA	NA	NA
WP_033060338.1\|2737772_2739056_-	glycosyltransferase family 39 protein	NA	NA	NA	NA
WP_003491346.1\|2739074_2739941_-	decaprenyl-phosphate phosphoribosyltransferase	NA	NA	NA	NA
WP_003362540.1\|2740096_2740357_-	stage V sporulation protein S	J9PTX7	Bacillus_phage	1.6e-08	39.8
WP_003491345.1\|2740495_2742037_-	ribonuclease Y	NA	NA	NA	NA
WP_003491344.1\|2742270_2743329_-	recombinase RecA	A0A0S2MVG1	Bacillus_phage	3.7e-120	66.5
WP_003491342.1\|2743477_2744062_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA
WP_003491340.1\|2744045_2745383_-	30S ribosomal protein S12 methylthiotransferase RimO	NA	NA	NA	NA
WP_033060339.1\|2745477_2747754_-	DNA translocase FtsK	S5VNE3	Mycobacterium_phage	4.0e-87	50.3
WP_003491338.1\|2747983_2748679_-\|protease	ATP-dependent Clp protease proteolytic subunit	NA	NA	NA	NA

DBSCAN-SWA_4

3212767 : 3221861

Staphylococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003494615.1\|3212767_3213454_-	response regulator transcription factor	W8CYM9	Bacillus_phage	1.1e-29	33.2
WP_033060812.1\|3213450_3213645_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_033060815.1\|3214040_3215396_-	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	A0A2K5B251	Erysipelothrix_phage	1.2e-59	31.1
WP_003494621.1\|3215623_3216082_-	hypothetical protein	NA	NA	NA	NA
WP_033060818.1\|3216416_3218276_+	LTA synthase family protein	W6LM83	Streptococcus_phage	4.2e-50	28.6
WP_033060821.1\|3218301_3219054_+	TSUP family transporter	NA	NA	NA	NA
WP_003494625.1\|3219387_3219852_-	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	8.8e-42	57.4
WP_003494627.1\|3219883_3221089_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	4.8e-116	53.9
WP_003494630.1\|3221207_3221861_-	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	4.1e-37	39.4

DBSCAN-SWA_5

3235581 : 3245189

Synechococcus_phage(42.86%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003494649.1\|3235581_3237081_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	9.4e-69	46.6
WP_033060839.1\|3237300_3237918_-	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	4.0e-26	39.8
WP_033060842.1\|3238045_3239041_-	phosphoribosylformylglycinamidine cyclo-ligase	M4QRQ6	Synechococcus_phage	3.8e-66	42.8
WP_080700113.1\|3239212_3240661_-	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	6.1e-57	34.7
WP_003494658.1\|3240775_3241480_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	G8EYA2	Synechococcus_phage	4.6e-42	42.1
WP_003494660.1\|3241479_3241959_-	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	4.4e-28	50.0
WP_033060845.1\|3242633_3245189_-	selenium-dependent xanthine dehydrogenase	A0A0P0IVM8	Acinetobacter_phage	1.1e-11	33.1

DBSCAN-SWA_6

3417267 : 3436194

Clostridium_phage(85.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_033061018.1\|3417267_3418266_-	hypothetical protein	A0A0A7RW91	Clostridium_phage	2.1e-141	71.7
WP_030036513.1\|3418277_3418532_-	hypothetical protein	A0A0A7S0T0	Clostridium_phage	1.1e-33	81.0
WP_033061021.1\|3418537_3420433_-	hypothetical protein	A0A0A7RU09	Clostridium_phage	1.8e-104	52.8
WP_033061024.1\|3420447_3421686_-	hypothetical protein	A0A0A7RU28	Clostridium_phage	1.4e-198	82.0
WP_033061026.1\|3421708_3422689_-	hypothetical protein	A0A0A7RU61	Clostridium_phage	2.3e-108	60.2
WP_033061028.1\|3422690_3424040_-	caspase family protein	A0A0A7RW86	Clostridium_phage	9.3e-76	74.6
WP_033061029.1\|3424054_3424396_-	hypothetical protein	A0A0A7S0S4	Clostridium_phage	1.8e-15	54.3
WP_033061031.1\|3424408_3425494_-	hypothetical protein	NA	NA	NA	NA
WP_033061034.1\|3425480_3425915_-	hypothetical protein	NA	NA	NA	NA
WP_033061036.1\|3425927_3427469_-	membrane protein	A0A0A7RU22	Clostridium_phage	7.0e-03	38.0
WP_162263235.1\|3427649_3427892_-	hypothetical protein	A0A0A7RW80	Clostridium_phage	9.9e-21	66.2
WP_033061041.1\|3427851_3428268_-	hypothetical protein	A0A0A7S0S0	Clostridium_phage	1.3e-44	70.5
WP_033061044.1\|3428281_3429169_-	hypothetical protein	A0A0A7RTZ9	Clostridium_phage	5.3e-120	74.7
WP_033061046.1\|3429173_3429593_-	hypothetical protein	A0A0A7RU17	Clostridium_phage	7.9e-58	71.9
WP_033061048.1\|3429598_3429946_-	hypothetical protein	A0A0A7RU51	Clostridium_phage	1.0e-34	60.6
WP_033061051.1\|3429950_3430316_-	hypothetical protein	A0A0A7RW73	Clostridium_phage	1.8e-34	57.9
WP_033061054.1\|3430315_3430600_-	hypothetical protein	A0A0A7S0R4	Clostridium_phage	4.6e-25	62.2
WP_033061057.1\|3431105_3431627_-	hypothetical protein	A0A0A7RVS1	Clostridium_phage	2.8e-36	50.0
WP_033061059.1\|3431742_3432063_-	hypothetical protein	NA	NA	NA	NA
WP_033061175.1\|3432119_3432920_-	ATP-binding protein	A0A2K9V3L7	Faecalibacterium_phage	2.6e-33	35.2
WP_033061176.1\|3432909_3433839_-	phage replisome organizer N-terminal domain-containing protein	A0A141E0P9	Streptococcus_phage	1.8e-38	41.3
WP_033061062.1\|3433929_3434142_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_033061064.1\|3434203_3434413_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_033061066.1\|3434605_3435016_+	helix-turn-helix transcriptional regulator	A0A0A7RUJ5	Clostridium_phage	8.7e-09	54.7
WP_033061069.1\|3435274_3435424_+	hypothetical protein	NA	NA	NA	NA
WP_003483806.1\|3435990_3436194_-	alpha/beta-type small acid-soluble spore protein	G3MAF8	Bacillus_virus	1.5e-09	43.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP009225

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection