CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP011303	Serratia liquefaciens strain HUMV-21 chromosome, complete genome	0 crisprs	cas3,DEDDh,csa3,DinG,WYL	0	0	5	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

953174 : 1008008

Salmonella_phage(25.0%)

holin,tRNA,capsid,protease,integrase,terminase

attL 955077:955092|attR 1010495:1010510

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_046372819.1\|953174_953957_+\|tRNA	tRNA1(Val) (adenine(37)-N6)-methyltransferase	NA	NA	NA	NA
WP_041414864.1\|953999_955637_-	L-aspartate oxidase	NA	NA	NA	NA
955077:955092	attL	NA	NA	NA	NA
WP_012146382.1\|955814_956390_+	RNA polymerase sigma factor RpoE	NA	NA	NA	NA
WP_020828261.1\|956420_957074_+	anti-sigma-E factor RseA	NA	NA	NA	NA
WP_020828260.1\|957073_958033_+	sigma-E factor regulatory protein RseB	NA	NA	NA	NA
WP_046372820.1\|958029_958506_+	SoxR-reducing system protein RseC	NA	NA	NA	NA
WP_046372821.1\|958519_959341_-	hypothetical protein	NA	NA	NA	NA
WP_046372822.1\|960129_961359_+\|integrase	site-specific integrase	H6WRW7	Salmonella_phage	4.5e-178	67.5
WP_071844537.1\|961336_961609_-	excisionase Xis	H6WRW8	Salmonella_phage	9.8e-17	46.7
WP_046372823.1\|961766_962429_-	DNA methyltransferase	G8C7S6	Escherichia_phage	3.0e-88	74.4
WP_046372824.1\|962431_962614_-	ANR family transcriptional regulator	NA	NA	NA	NA
WP_046372825.1\|962629_963010_-	hypothetical protein	NA	NA	NA	NA
WP_046372827.1\|963475_963733_-	hypothetical protein	A0A1V0E5L9	Salmonella_phage	6.2e-21	60.0
WP_144408511.1\|963790_964339_-	hypothetical protein	R9W0X9	Serratia_phage	2.0e-16	35.9
WP_046372828.1\|964446_964767_-	hypothetical protein	NA	NA	NA	NA
WP_046372829.1\|964763_965069_-	hypothetical protein	NA	NA	NA	NA
WP_046372830.1\|965068_965551_-	hypothetical protein	NA	NA	NA	NA
WP_046374976.1\|965547_966054_-	class I SAM-dependent methyltransferase	H9C170	Pectobacterium_phage	2.9e-70	78.7
WP_046372831.1\|966068_966764_-	hypothetical protein	A0A076G7C3	Sinorhizobium_phage	1.4e-27	36.9
WP_052730606.1\|966760_967087_-	hypothetical protein	S4TRC5	Salmonella_phage	2.4e-06	40.0
WP_046372832.1\|967096_967936_-	hypothetical protein	NA	NA	NA	NA
WP_046372834.1\|968362_968815_-	single-stranded DNA-binding protein	A0A0A0P1Q9	Enterobacteria_phage	7.7e-51	81.9
WP_046372835.1\|968815_969493_-	recombinase	K7PKU3	Enterobacteria_phage	3.3e-61	51.5
WP_046372836.1\|969772_969913_-\|protease	protease FtsH-inhibitory lysogeny factor CIII	Q76H38	Enterobacteria_phage	2.0e-05	60.0
WP_052730607.1\|970254_970632_-	hypothetical protein	A0A088CQ77	Enterobacteria_phage	1.4e-05	46.3
WP_046372837.1\|970597_971212_-	pentapeptide repeat-containing protein	Q8HAH0	Salmonella_phage	1.9e-31	72.6
WP_046372838.1\|971373_971616_-	hypothetical protein	NA	NA	NA	NA
WP_158499679.1\|971602_971752_-	hypothetical protein	NA	NA	NA	NA
WP_046372839.1\|971772_972099_-	hypothetical protein	A0A2H4J657	uncultured_Caudovirales_phage	5.8e-08	41.3
WP_046374979.1\|972543_972930_-	hypothetical protein	NA	NA	NA	NA
WP_046372840.1\|972959_973394_-	hypothetical protein	NA	NA	NA	NA
WP_046372841.1\|973471_974107_-	helix-turn-helix domain-containing protein	K7PM82	Enterobacteria_phage	5.2e-61	55.5
WP_046372842.1\|974210_974426_+	helix-turn-helix transcriptional regulator	Q716D6	Shigella_phage	5.3e-18	67.6
WP_046372843.1\|974565_974844_+	hypothetical protein	A4KWU5	Enterobacteria_phage	5.1e-21	54.3
WP_046372844.1\|975029_975914_+	replication protein	A0A0M5M7Y1	Salmonella_phage	1.7e-57	77.6
WP_046372845.1\|975913_977251_+	AAA family ATPase	A0A2I7S0U1	Vibrio_phage	2.8e-80	37.1
WP_046372846.1\|977254_977467_+	hypothetical protein	NA	NA	NA	NA
WP_046372847.1\|977490_977697_+	hypothetical protein	G8C7S5	Escherichia_phage	4.6e-11	50.0
WP_046372848.1\|977689_977995_+	hypothetical protein	B9UDH9	Salmonella_phage	1.7e-09	47.0
WP_046372849.1\|977987_978281_+	hypothetical protein	A0A1W6DXQ0	Salmonella_phage	8.3e-14	66.7
WP_046372850.1\|978285_978624_+	hypothetical protein	H6WRY2	Salmonella_phage	3.2e-17	48.9
WP_046372851.1\|978625_978880_+	DUF4752 family protein	NA	NA	NA	NA
WP_046372852.1\|978884_979328_+	hypothetical protein	I6PD71	Cronobacter_phage	3.3e-54	67.8
WP_158499680.1\|979327_979531_+	hypothetical protein	NA	NA	NA	NA
WP_046374980.1\|979538_979718_+	NinE family protein	NA	NA	NA	NA
WP_020827358.1\|979878_979998_+	hypothetical protein	NA	NA	NA	NA
WP_052730633.1\|979990_980611_+	hypothetical protein	S4TSR3	Salmonella_phage	9.6e-44	48.3
WP_046372855.1\|980941_981556_+	hypothetical protein	F1C5D0	Cronobacter_phage	2.3e-58	59.1
WP_144408536.1\|982305_982617_+\|holin	holin	E7C9S8	Salmonella_phage	1.2e-39	76.8
WP_046372857.1\|982603_983044_+	lysozyme	A0A0M4R365	Salmonella_phage	1.3e-50	70.3
WP_158499681.1\|983052_983451_+	hypothetical protein	NA	NA	NA	NA
WP_046372859.1\|983853_984048_+	hypothetical protein	NA	NA	NA	NA
WP_071844601.1\|984109_984385_+	hypothetical protein	I3NL98	Bifidobacterium_phage	2.4e-10	51.7
WP_046372861.1\|984625_985102_+\|terminase	terminase	C7U0V7	Enterobacteria_phage	2.7e-54	71.9
WP_046372862.1\|985103_986780_+\|terminase	phage terminase large subunit	H9C191	Pectobacterium_phage	6.3e-239	72.4
WP_046372863.1\|986780_988310_+	DUF1073 domain-containing protein	A0A2R3UAL5	Myoviridae_environmental_samples	2.8e-100	44.2
WP_046374982.1\|988362_989052_+\|capsid	minor capsid protein	H9C0V1	Aeromonas_phage	1.2e-66	55.3
WP_046372864.1\|989064_990246_+	DUF2213 domain-containing protein	A0A219YCD3	Aeromonas_phage	6.3e-60	38.3
WP_046372865.1\|990247_990730_+	hypothetical protein	A0A219YBF2	Aeromonas_phage	1.8e-34	49.7
WP_046372866.1\|990729_991770_+	DUF2184 domain-containing protein	A0A219YBB0	Aeromonas_phage	3.3e-89	52.0
WP_046372867.1\|991774_992116_+	hypothetical protein	A0A1X9SFA9	Acinetobacter_phage	2.2e-10	42.6
WP_046372868.1\|992119_992563_+	DUF4054 domain-containing protein	H9C0W0	Aeromonas_phage	6.5e-18	45.9
WP_052730634.1\|992599_993025_+	hypothetical protein	A0A077KC03	Edwardsiella_phage	1.7e-23	46.2
WP_020827337.1\|993021_993390_+	hypothetical protein	A0A077KAW7	Edwardsiella_phage	1.0e-29	53.3
WP_052730635.1\|993500_993932_+	hypothetical protein	A0A077KC88	Edwardsiella_phage	1.9e-14	34.4
WP_046372871.1\|993932_995411_+	DUF3383 domain-containing protein	H9C0W5	Aeromonas_phage	2.0e-71	35.8
WP_052730636.1\|995509_995851_+	hypothetical protein	NA	NA	NA	NA
WP_046372873.1\|995859_996261_+	hypothetical protein	H9C0W7	Aeromonas_phage	8.7e-14	45.0
WP_046372874.1\|996481_998260_+	transglycosylase SLT domain-containing protein	A0A0M4REK7	Salmonella_phage	4.3e-52	47.9
WP_046372875.1\|998259_999069_+	hypothetical protein	NA	NA	NA	NA
WP_046372876.1\|999068_999377_+	hypothetical protein	A0A077K9U4	Edwardsiella_phage	9.7e-21	43.4
WP_046372877.1\|999376_1000240_+	hypothetical protein	A0A077KC17	Edwardsiella_phage	3.4e-39	34.1
WP_046372878.1\|1000239_1000821_+	hypothetical protein	A0A077KAY0	Edwardsiella_phage	1.4e-25	36.0
WP_046372879.1\|1001086_1001446_+	hypothetical protein	A0A077KCA1	Edwardsiella_phage	1.7e-24	46.5
WP_046372880.1\|1001453_1002692_+	bacteriophage protein	A0A077KGW9	Edwardsiella_phage	6.7e-113	54.2
WP_046372881.1\|1002691_1003279_+	DUF2612 domain-containing protein	A0A2R3UAM9	Myoviridae_environmental_samples	1.0e-34	39.6
WP_046372882.1\|1003280_1004567_+	hypothetical protein	A0A077KC23	Edwardsiella_phage	2.5e-14	35.1
WP_046372883.1\|1004621_1008008_+	hypothetical protein	A0A1V0E6N8	Klebsiella_phage	3.4e-82	29.7
1010495:1010510	attR	NA	NA	NA	NA

DBSCAN-SWA_2

1249514 : 1259449

Planktothrix_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_020827997.1\|1249514_1250603_+	sulfate/thiosulfate ABC transporter ATP-binding protein CysA	G9BWD6	Planktothrix_phage	9.3e-34	40.7
WP_020827996.1\|1250687_1251569_+	cysteine synthase CysM	A0A1X9I5F1	Streptococcus_phage	1.1e-53	40.3
WP_046374997.1\|1251572_1253525_-	MacB family efflux pump subunit	G9BWD6	Planktothrix_phage	3.5e-39	41.6
WP_046372986.1\|1253527_1254721_-	efflux RND transporter periplasmic adaptor subunit	A0A140XAI1	Dickeya_phage	2.2e-28	69.7
WP_020827993.1\|1254895_1255576_+	response regulator transcription factor	NA	NA	NA	NA
WP_046374998.1\|1255581_1256898_+	HAMP domain-containing protein	W8CYF6	Bacillus_phage	5.4e-20	25.6
WP_012146162.1\|1257162_1257672_-	PTS glucose transporter subunit IIA	NA	NA	NA	NA
WP_020827991.1\|1257721_1259449_-	phosphoenolpyruvate-protein phosphotransferase PtsI	A0A1V0SGR7	Hokovirus	1.1e-17	32.9

DBSCAN-SWA_3

2806281 : 2866330

Tupanvirus(25.0%)

coat,tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_046373753.1\|2806281_2808669_-\|tRNA	phenylalanine--tRNA ligase subunit beta	A0A1L3IZU3	BeAn_58058_virus	2.4e-05	24.0
WP_020826621.1\|2808683_2809667_-\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2K9L3A8	Tupanvirus	2.2e-34	38.1
WP_122079064.1\|2809859_2809955_-	pheST operon leader peptide PheM	NA	NA	NA	NA
WP_020826620.1\|2810021_2810378_-	50S ribosomal protein L20	NA	NA	NA	NA
WP_004931418.1\|2810421_2810619_-	50S ribosomal protein L35	NA	NA	NA	NA
WP_013812633.1\|2810717_2811269_-	translation initiation factor IF-3	A0A2L0UZ54	Agrobacterium_phage	4.4e-16	33.7
WP_041414516.1\|2811272_2813201_-\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	4.5e-132	37.7
WP_046375046.1\|2813424_2814036_-	hypothetical protein	NA	NA	NA	NA
WP_046373754.1\|2814287_2815328_-	hypothetical protein	NA	NA	NA	NA
WP_020826578.1\|2815575_2815797_+	hypothetical protein	NA	NA	NA	NA
WP_020826577.1\|2815921_2816608_+	MarC family NAAT transporter	NA	NA	NA	NA
WP_046375047.1\|2816646_2817780_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_020826575.1\|2817929_2819213_-	septum site-determining protein	NA	NA	NA	NA
WP_046373755.1\|2819469_2820807_-	cytochrome c	NA	NA	NA	NA
WP_041414502.1\|2820819_2822601_-	GMC family oxidoreductase	NA	NA	NA	NA
WP_046373756.1\|2822603_2823329_-	gluconate 2-dehydrogenase subunit 3 family protein	NA	NA	NA	NA
WP_020826571.1\|2823636_2824302_-	transglycosylase SLT domain-containing protein	I6ZXX9	Escherichia_phage	7.0e-08	50.0
WP_020826570.1\|2824411_2824711_+	type V toxin-antitoxin system endoribonuclease antitoxin GhoS	NA	NA	NA	NA
WP_046373757.1\|2824843_2825788_+	metal ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_046373758.1\|2825784_2826675_+	manganese/iron ABC transporter ATP-binding protein	A0A1V0SKJ1	Klosneuvirus	1.2e-07	26.4
WP_046373759.1\|2826674_2827535_+	iron/manganese ABC transporter permease subunit YfeC	NA	NA	NA	NA
WP_020826566.1\|2827534_2828395_+	metal ABC transporter permease	NA	NA	NA	NA
WP_046373760.1\|2828432_2828882_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_046373761.1\|2829142_2830012_+	fructosamine kinase family protein	NA	NA	NA	NA
WP_046373762.1\|2830056_2830617_-	membrane protein	NA	NA	NA	NA
WP_046373763.1\|2830812_2832093_+	hypothetical protein	NA	NA	NA	NA
WP_020826561.1\|2832151_2832817_+	hexitol phosphatase HxpB	NA	NA	NA	NA
WP_020826560.1\|2833213_2833762_+	metal-dependent hydrolase	A0A127AVX7	Bacillus_phage	4.9e-07	36.1
WP_020826559.1\|2833945_2835337_+	L-cystine transporter	NA	NA	NA	NA
WP_046375048.1\|2835400_2836210_-	phosphonoacetaldehyde hydrolase	NA	NA	NA	NA
WP_046373764.1\|2836218_2837322_-	2-aminoethylphosphonate--pyruvate transaminase	NA	NA	NA	NA
WP_046373765.1\|2837591_2838311_+	phosphonate utilization transcriptional regulator PhnR	NA	NA	NA	NA
WP_020826555.1\|2838385_2839177_-	DNA-binding transcriptional regulator KdgR	NA	NA	NA	NA
WP_044552908.1\|2839388_2840783_+	MFS transporter	NA	NA	NA	NA
WP_082100050.1\|2841076_2842267_-	MFS transporter	NA	NA	NA	NA
WP_082100023.1\|2842290_2842521_-	hypothetical protein	NA	NA	NA	NA
WP_046373766.1\|2842517_2844050_-	MFS transporter	NA	NA	NA	NA
WP_046373767.1\|2844225_2845113_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_020826553.1\|2845277_2846156_-\|protease	protease HtpX	NA	NA	NA	NA
WP_041414497.1\|2846563_2846947_-	DUF4260 domain-containing protein	NA	NA	NA	NA
WP_046373768.1\|2847046_2849083_-	carboxy terminal-processing peptidase	A0A0R6PIZ1	Moraxella_phage	8.8e-86	34.5
WP_020826550.1\|2849102_2849813_-	RNA chaperone ProQ	NA	NA	NA	NA
WP_046373769.1\|2849908_2850406_-	GAF domain-containing protein	NA	NA	NA	NA
WP_046375050.1\|2850650_2851898_+	membrane integrity lipid transport subunit YebS	NA	NA	NA	NA
WP_046373770.1\|2851866_2854497_+	PqiB family protein	NA	NA	NA	NA
WP_046373771.1\|2854603_2856040_+	16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF	NA	NA	NA	NA
WP_020826545.1\|2856319_2856859_+\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_020826544.1\|2856861_2857365_+\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_020826543.1\|2857370_2857919_+\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_046373772.1\|2857941_2858706_+	molecular chaperone	NA	NA	NA	NA
WP_046373773.1\|2858857_2861203_+	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
WP_020826539.1\|2861221_2862154_+\|coat	spore coat U domain-containing protein	NA	NA	NA	NA
WP_044550237.1\|2862290_2862530_+	YebV family protein	NA	NA	NA	NA
WP_046373774.1\|2862584_2863187_-	hypothetical protein	NA	NA	NA	NA
WP_046373775.1\|2863188_2863581_-	ASCH domain-containing protein	NA	NA	NA	NA
WP_153263172.1\|2864035_2864173_+	hypothetical protein	NA	NA	NA	NA
WP_041414492.1\|2864539_2864749_+	hypothetical protein	NA	NA	NA	NA
WP_046373776.1\|2864899_2866330_-\|protease	serralysin family metalloprotease	NA	NA	NA	NA

DBSCAN-SWA_4

2963434 : 3033512

Salmonella_phage(52.5%)

head,capsid,holin,protease,portal,integrase,terminase,plate,tail,lysis

attL 2959183:2959198|attR 3040977:3040992

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2959183:2959198	attL	NA	NA	NA	NA
WP_046373834.1\|2963434_2964028_-\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	1.0e-55	53.3
WP_046373835.1\|2964069_2964408_-	polyketide cyclase	NA	NA	NA	NA
WP_046373836.1\|2964404_2964719_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_046373837.1\|2964800_2966072_-	NupC/NupG family nucleoside CNT transporter	NA	NA	NA	NA
WP_046373838.1\|2966244_2967183_-	pseudouridine-5'-phosphate glycosidase	NA	NA	NA	NA
WP_020826413.1\|2967179_2968298_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_046373839.1\|2968857_2969283_-	universal stress protein	NA	NA	NA	NA
WP_046373840.1\|2969454_2970852_-	c-type cytochrome	NA	NA	NA	NA
WP_020826410.1\|2971339_2971606_+	DUF2024 family protein	NA	NA	NA	NA
WP_020826409.1\|2971602_2971857_+	hypothetical protein	NA	NA	NA	NA
WP_020826408.1\|2971887_2972406_-	hypothetical protein	NA	NA	NA	NA
WP_046373841.1\|2972523_2973345_-	carbon-nitrogen hydrolase family protein	NA	NA	NA	NA
WP_046373842.1\|2973413_2974211_+	LuxR family transcriptional regulator	NA	NA	NA	NA
WP_046373843.1\|2974341_2975157_+	MetQ/NlpA family lipoprotein	NA	NA	NA	NA
WP_046373844.1\|2975348_2976383_+	TAXI family TRAP transporter solute-binding subunit	NA	NA	NA	NA
WP_046373845.1\|2976392_2978351_+	TRAP transporter permease	NA	NA	NA	NA
WP_046373846.1\|2978340_2979057_+	FadR family transcriptional regulator	NA	NA	NA	NA
WP_046373847.1\|2979059_2980250_+	L-2-hydroxyglutarate oxidase	NA	NA	NA	NA
WP_020826400.1\|2980282_2981200_-	sugar ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_020826399.1\|2981263_2982292_-	ABC transporter permease	NA	NA	NA	NA
WP_020826398.1\|2982309_2983794_-	sugar ABC transporter ATP-binding protein	Q9EMR9	Amsacta_moorei_entomopoxvirus	4.4e-10	21.9
WP_020826397.1\|2983891_2984821_-	sugar ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_046373848.1\|2985356_2986199_+	aldolase	NA	NA	NA	NA
WP_046373849.1\|2986321_2987923_+	two-component system sensor histidine kinase DcuS	NA	NA	NA	NA
WP_046373850.1\|2987925_2988639_+	two-component system response regulator DcuR	NA	NA	NA	NA
WP_046373852.1\|2989034_2989394_-	hypothetical protein	NA	NA	NA	NA
WP_046373853.1\|2989436_2989760_-	hypothetical protein	NA	NA	NA	NA
WP_046373854.1\|2989772_2990093_-	hypothetical protein	NA	NA	NA	NA
WP_071844558.1\|2990270_2990495_-	hypothetical protein	NA	NA	NA	NA
WP_041415317.1\|2990714_2990930_-	helix-turn-helix transcriptional regulator	A0A0E3U244	Fusobacterium_phage	5.2e-05	33.9
WP_046373855.1\|2990937_2991501_-	DUF2975 domain-containing protein	NA	NA	NA	NA
WP_020826387.1\|2991643_2992843_-	trans-2-enoyl-CoA reductase family protein	NA	NA	NA	NA
WP_046375052.1\|2993054_2993903_+	aminoglycoside phosphotransferase family protein	NA	NA	NA	NA
WP_041415315.1\|2993946_2994297_-	DUF4377 domain-containing protein	NA	NA	NA	NA
WP_052730616.1\|2994568_2995135_+	DUF4136 domain-containing protein	NA	NA	NA	NA
WP_046373857.1\|2995836_2997528_+	hypothetical protein	A0A289Z7B8	Serratia_phage	9.5e-86	36.1
WP_052730617.1\|2997690_2997972_+	hypothetical protein	A0A0U4JIT5	Pseudomonas_phage	5.5e-07	40.5
WP_046373858.1\|2998724_2999024_-	hypothetical protein	NA	NA	NA	NA
WP_046373859.1\|2999126_2999972_-	phage repressor protein CI	Q6K1G0	Salmonella_virus	4.3e-71	47.0
WP_046373860.1\|3000085_3000478_+	hypothetical protein	NA	NA	NA	NA
WP_046373861.1\|3000509_3001019_+	phage regulatory CII family protein	A0A218M4I4	Erwinia_phage	4.5e-47	55.4
WP_123905322.1\|3001029_3001266_+	DUF2724 domain-containing protein	NA	NA	NA	NA
WP_046373862.1\|3001198_3001654_-	hypothetical protein	NA	NA	NA	NA
WP_046373863.1\|3001652_3001874_+	hypothetical protein	NA	NA	NA	NA
WP_046373864.1\|3001875_3002229_+	DUF5347 domain-containing protein	E5G6L5	Salmonella_phage	3.6e-27	54.5
WP_046373865.1\|3002295_3002568_+	DUF2732 family protein	NA	NA	NA	NA
WP_046373866.1\|3002567_3002786_+	TraR/DksA family transcriptional regulator	A0A218M4I6	Erwinia_phage	3.5e-17	61.1
WP_046373867.1\|3002788_3003613_+	Dam family site-specific DNA-(adenine-N6)-methyltransferase	E5G6L8	Salmonella_phage	4.7e-62	45.7
WP_046373868.1\|3003817_3004123_-	hypothetical protein	NA	NA	NA	NA
WP_071844560.1\|3004197_3006672_+	replication endonuclease	F1BUS0	Erwinia_phage	6.2e-235	56.3
WP_046373869.1\|3006875_3007061_+	hypothetical protein	NA	NA	NA	NA
WP_046373870.1\|3007064_3007298_+	hypothetical protein	NA	NA	NA	NA
WP_046373871.1\|3007456_3007660_+	hypothetical protein	NA	NA	NA	NA
WP_046373872.1\|3007659_3008493_+	hypothetical protein	A0A0M4R2T6	Salmonella_phage	4.4e-60	46.7
WP_046373873.1\|3008936_3009980_-\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	1.2e-152	79.2
WP_046373874.1\|3009976_3010660_-	hypothetical protein	A0A218M4L2	Erwinia_phage	2.8e-28	36.1
WP_046373875.1\|3010659_3012426_-\|terminase	terminase ATPase subunit family protein	A0A1S6KZW3	Salmonella_phage	1.4e-300	83.7
WP_046373876.1\|3012569_3013403_+\|capsid	GPO family capsid scaffolding protein	F1BUR1	Erwinia_phage	5.9e-81	56.6
WP_046373877.1\|3013463_3014528_+\|capsid	phage major capsid protein, P2 family	E5G6M6	Salmonella_phage	5.0e-141	72.7
WP_082100051.1\|3014566_3015202_+\|terminase	terminase endonuclease subunit	F1BUQ7	Erwinia_phage	4.7e-54	54.3
WP_046373879.1\|3015300_3015765_+\|head	head completion/stabilization protein	E5G6M8	Salmonella_phage	8.8e-42	55.2
WP_046373880.1\|3015764_3015968_+\|tail	tail protein X	E5G6M9	Salmonella_phage	3.4e-22	70.1
WP_046373881.1\|3015972_3016341_+	hypothetical protein	NA	NA	NA	NA
WP_052730619.1\|3016343_3016673_+\|holin	phage holin family protein	A0A077KER0	Ralstonia_phage	9.1e-09	41.0
WP_046373882.1\|3016647_3017145_+	glycoside hydrolase family 104 protein	S4TUB1	Salmonella_phage	5.5e-50	60.6
WP_082100025.1\|3017141_3017600_+\|lysis	LysB family phage lysis regulatory protein	E5G6N2	Salmonella_phage	3.3e-25	44.1
WP_046373883.1\|3017707_3018139_+\|tail	phage tail protein	A0A1S6KZY0	Salmonella_phage	1.7e-39	60.4
WP_046373884.1\|3018131_3018578_+	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	4.1e-36	51.4
WP_046373885.1\|3018722_3019316_+\|plate	phage baseplate assembly protein V	O80314	Escherichia_phage	8.3e-53	56.1
WP_046373886.1\|3019312_3019663_+\|plate	baseplate assembly protein	F1BUP4	Erwinia_phage	1.2e-27	54.1
WP_046373887.1\|3019659_3020568_+\|plate	baseplate assembly protein	F1BUP3	Erwinia_phage	1.3e-110	69.5
WP_046373888.1\|3020560_3021160_+\|tail	phage tail protein I	E5G6N9	Salmonella_phage	3.1e-55	59.0
WP_046373889.1\|3021161_3024476_+	hypothetical protein	A0A1V0E6N8	Klebsiella_phage	4.0e-80	29.1
WP_046373890.1\|3024468_3025539_+\|tail	phage tail protein	A0A0M3ULH6	Salmonella_phage	5.7e-36	52.2
WP_046373891.1\|3025734_3026910_+\|tail	phage tail sheath protein	A0A1S6KZY7	Salmonella_phage	1.6e-180	81.7
WP_046373892.1\|3026920_3027436_+\|tail	phage major tail tube protein	E5G6P8	Salmonella_phage	5.3e-64	69.0
WP_046373893.1\|3027496_3027787_+\|tail	phage tail assembly protein	E5G6P9	Salmonella_phage	5.7e-23	58.9
WP_071844561.1\|3027801_3027921_+\|tail	GpE family phage tail protein	A0A0F7LCR6	Escherichia_phage	2.5e-09	66.7
WP_046373894.1\|3027913_3030457_+\|tail	phage tail tape measure protein	E5G6Q1	Salmonella_phage	2.5e-154	54.3
WP_046373895.1\|3030453_3030918_+\|tail	phage tail protein	E5G6Q2	Salmonella_phage	1.4e-47	63.3
WP_046373896.1\|3030914_3032012_+	phage late control D family protein	A0A1S6KZZ5	Salmonella_phage	9.8e-124	65.5
WP_071844562.1\|3032085_3032304_+	hypothetical protein	Q53ZE7	Salmonella_virus	6.2e-22	65.3
WP_046373897.1\|3032423_3033512_+\|integrase	tyrosine-type recombinase/integrase	A0A0M4S6G4	Salmonella_phage	2.0e-124	60.9
3040977:3040992	attR	NA	NA	NA	NA

DBSCAN-SWA_5

5224565 : 5295909

uncultured_Caudovirales_phage(47.62%)

head,capsid,tRNA,protease,portal,integrase,terminase,tail

attL 5240028:5240044|attR 5297245:5297261

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_046374895.1\|5224565_5225669_-\|tRNA	tRNA (uridine(54)-C5)-methyltransferase TrmA	NA	NA	NA	NA
WP_046375109.1\|5226070_5227924_+	TonB-dependent vitamin B12 receptor BtuB	A0A0P0I887	Acinetobacter_phage	8.8e-08	26.7
WP_041415094.1\|5227868_5228732_+	glutamate racemase	NA	NA	NA	NA
WP_046374896.1\|5234925_5235882_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_046374897.1\|5235905_5237420_+	sugar ABC transporter ATP-binding protein	F2Y2R6	Organic_Lake_phycodnavirus	9.3e-08	28.3
WP_020837503.1\|5237437_5238439_+	ABC transporter permease	NA	NA	NA	NA
WP_046374898.1\|5238435_5239428_+	sugar ABC transporter permease YjfF	NA	NA	NA	NA
WP_041415741.1\|5239432_5240260_-	HTH-type transcriptional regulator HdfR	NA	NA	NA	NA
5240028:5240044	attL	NA	NA	NA	NA
WP_020837497.1\|5240379_5240718_+	DUF413 domain-containing protein	NA	NA	NA	NA
WP_046374899.1\|5240745_5242269_-	YifB family Mg chelatase-like AAA ATPase	NA	NA	NA	NA
WP_020837491.1\|5242610_5243843_+	MFS transporter	NA	NA	NA	NA
WP_015962288.1\|5243976_5244075_+	ilv operon leader peptide	NA	NA	NA	NA
WP_046374900.1\|5244217_5245864_+	acetolactate synthase 2 catalytic subunit	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	5.9e-64	31.7
WP_020837489.1\|5245860_5246118_+	acetolactate synthase 2 small subunit	NA	NA	NA	NA
WP_020837487.1\|5246140_5247067_+	branched-chain-amino-acid transaminase	NA	NA	NA	NA
WP_046374901.1\|5247163_5249014_+	dihydroxy-acid dehydratase	NA	NA	NA	NA
WP_041415091.1\|5249019_5250564_+	threonine ammonia-lyase, biosynthetic	NA	NA	NA	NA
WP_020837483.1\|5250585_5251287_+	DUF2461 domain-containing protein	NA	NA	NA	NA
WP_020837481.1\|5251403_5252303_-	HTH-type transcriptional activator IlvY	NA	NA	NA	NA
WP_046374902.1\|5252471_5253947_+	ketol-acid reductoisomerase	NA	NA	NA	NA
WP_046374903.1\|5254295_5255228_-	sugar kinase	NA	NA	NA	NA
WP_020837477.1\|5255393_5255597_-	4-oxalocrotonate tautomerase family protein	NA	NA	NA	NA
WP_020837476.1\|5255743_5256529_+	cyclic-guanylate-specific phosphodiesterase	NA	NA	NA	NA
WP_046374904.1\|5256627_5258661_+	AsmA family protein	NA	NA	NA	NA
WP_046374905.1\|5258690_5259449_-	CDP-diacylglycerol diphosphatase	NA	NA	NA	NA
WP_020837472.1\|5259557_5260880_-	MHS family MFS transporter	NA	NA	NA	NA
WP_020837471.1\|5261208_5262228_-	inner membrane protein YhjD	NA	NA	NA	NA
WP_020837470.1\|5262567_5263434_+	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA
WP_046374906.1\|5263450_5265445_-	cyclic di-GMP phosphodiesterase	A0A127AWB9	Bacillus_phage	5.3e-11	31.8
WP_020837467.1\|5266056_5266554_+	ATP-independent periplasmic protein-refolding chaperone	NA	NA	NA	NA
WP_046374908.1\|5267450_5270465_+\|protease	autotransporter serine protease	NA	NA	NA	NA
WP_020837461.1\|5270534_5273636_+\|protease	autotransporter serine protease	A0A127AWU5	Bacillus_phage	1.2e-06	26.6
WP_044554851.1\|5274102_5274954_+	response regulator	NA	NA	NA	NA
WP_046374909.1\|5274943_5276728_-	response regulator	Q8QKV7	Ectocarpus_siliculosus_virus	7.6e-25	24.5
WP_046374910.1\|5276724_5277219_-	molybdopterin-dependent oxidoreductase	NA	NA	NA	NA
WP_046374911.1\|5277378_5278731_-	glutathione-disulfide reductase	NA	NA	NA	NA
WP_020837454.1\|5278860_5279703_-	23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ	NA	NA	NA	NA
WP_158499690.1\|5279896_5280058_+	hypothetical protein	NA	NA	NA	NA
WP_046374912.1\|5280092_5280692_-\|tail	tail assembly protein	A0A1B0VMI5	Pseudomonas_phage	2.4e-55	59.5
WP_046374913.1\|5280705_5282367_-\|terminase	terminase large subunit	A0A2H4JB64	uncultured_Caudovirales_phage	3.3e-280	82.1
WP_046374914.1\|5282350_5282707_-\|terminase	phage terminase small subunit P27 family	A0A2H4JHS3	uncultured_Caudovirales_phage	1.0e-53	88.0
WP_046374915.1\|5282980_5283427_-	HNH endonuclease	A0A2H4JAS8	uncultured_Caudovirales_phage	6.0e-48	61.6
WP_046374916.1\|5283426_5283723_-\|head,tail	phage gp6-like head-tail connector protein	A0A2H4JD08	uncultured_Caudovirales_phage	8.1e-41	82.8
WP_046374917.1\|5283719_5284055_-\|head	phage head closure protein	A0A1W6JP44	Morganella_phage	5.8e-27	53.6
WP_144408534.1\|5284051_5285269_-\|portal	phage portal protein	A0A2H4JFJ9	uncultured_Caudovirales_phage	5.4e-192	78.9
WP_046374919.1\|5285270_5285822_-\|head,protease	HK97 family phage prohead protease	A0A2H4JB68	uncultured_Caudovirales_phage	3.0e-73	75.3
WP_046374920.1\|5285867_5287046_-\|capsid	phage major capsid protein	A0A2H4JED2	uncultured_Caudovirales_phage	2.5e-157	73.1
WP_046374921.1\|5287305_5288028_+	HEPN domain-containing protein	NA	NA	NA	NA
WP_046374922.1\|5288069_5288363_-	hypothetical protein	NA	NA	NA	NA
WP_046374923.1\|5288384_5288639_-	hypothetical protein	NA	NA	NA	NA
WP_046374924.1\|5288658_5288910_-	pyocin activator protein PrtN, phage related protein	A0A2K8HN48	Pseudomonas_phage	7.6e-08	38.8
WP_082100057.1\|5289222_5290689_-	DNA primase	Q7M2A8	Enterobacteria_phage	8.2e-126	49.9
WP_046374926.1\|5290949_5291288_-	hypothetical protein	A0A2H4JCX7	uncultured_Caudovirales_phage	4.2e-25	57.1
WP_046374928.1\|5291461_5291695_-	hypothetical protein	NA	NA	NA	NA
WP_144408535.1\|5291687_5292479_-	host cell division inhibitor Icd-like protein	A0A2H4JGN8	uncultured_Caudovirales_phage	7.7e-30	38.0
WP_046374929.1\|5292475_5293252_-	anti-repressor protein	A0A0R6PGY3	Moraxella_phage	3.8e-21	61.6
WP_046374930.1\|5293393_5293678_-	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_046374931.1\|5293781_5294588_-	hypothetical protein	NA	NA	NA	NA
WP_046374932.1\|5294679_5295909_-\|integrase	site-specific integrase	A0A2H4JB45	uncultured_Caudovirales_phage	1.2e-127	54.1
5297245:5297261	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage