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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP011311 Corynebacterium camporealensis strain DSM 44610 chromosome, complete genome 2 crisprs DEDDh,cas3,cas2,cas1,cas9,WYL,csa3,DinG 0 10 2 0

Results visualization

1. NZ_CP011311
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011311_1 312625-312772 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011311_2 591008-592643 TypeII NA
25 spacers
cas3,cas2,cas1,cas9

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP011311_2 2.2|591108|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT 591108-591135 28 NZ_CP029832 Azospirillum ramasamyi strain M2T2B2 plasmid unnamed2, complete sequence 285228-285255 4 0.857
NZ_CP011311_2 2.2|591108|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT 591108-591135 28 NZ_CP016083 Streptomyces sp. SAT1 plasmid unnamed3, complete sequence 634487-634514 5 0.821
NZ_CP011311_2 2.2|591108|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT 591108-591135 28 NZ_CP032324 Azospirillum brasilense strain MTCC4035 plasmid p3, complete sequence 505617-505644 5 0.821
NZ_CP011311_2 2.2|591108|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT 591108-591135 28 NZ_CP007797 Azospirillum brasilense strain Az39 plasmid AbAZ39_p4, complete sequence 10114-10141 5 0.821
NZ_CP011311_2 2.2|591108|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT 591108-591135 28 NC_016624 Azospirillum lipoferum 4B plasmid AZO_p5, complete sequence 295418-295445 5 0.821
NZ_CP011311_2 2.2|591108|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT 591108-591135 28 CP054927 Streptomyces fulvissimus strain NA06532 plasmid unnamed1, complete sequence 11086-11113 5 0.821
NZ_CP011311_2 2.2|591108|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT 591108-591135 28 NZ_CP022366 Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence 263528-263555 5 0.821
NZ_CP011311_2 2.2|591108|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT 591108-591135 28 NZ_CP013634 Rhizobium sp. N324 plasmid pRspN324d, complete sequence 106386-106413 5 0.821
NZ_CP011311_2 2.2|591108|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT 591108-591135 28 NZ_CP044073 Pseudomonas oryzihabitans strain FDAARGOS_657 plasmid unnamed2, complete sequence 131181-131208 5 0.821
NZ_CP011311_2 2.2|591108|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT 591108-591135 28 NZ_CP040819 Paraoceanicella profunda strain D4M1 plasmid pD4M1A, complete sequence 39282-39309 5 0.821
NZ_CP011311_2 2.2|591108|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT 591108-591135 28 MH588544 Caulobacter phage CcrBL10, complete genome 104502-104529 5 0.821
NZ_CP011311_2 2.2|591108|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT 591108-591135 28 NZ_CP032322 Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence 885950-885977 5 0.821
NZ_CP011311_2 2.2|591108|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT 591108-591135 28 NZ_CP035092 Paracoccus denitrificans strain ATCC 19367 plasmid unnamed1, complete sequence 367267-367294 5 0.821
NZ_CP011311_2 2.2|591108|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT 591108-591135 28 NC_008688 Paracoccus denitrificans PD1222 plasmid 1, complete sequence 614615-614642 5 0.821
NZ_CP011311_2 2.8|591492|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT 591492-591519 28 KU998244 Gordonia phage Smoothie, complete genome 83025-83052 5 0.821
NZ_CP011311_2 2.19|592196|28|NZ_CP011311|CRISPRCasFinder,CRT 592196-592223 28 NZ_CP017943 Phyllobacterium zundukense strain Tri-48 plasmid unnamed2, complete sequence 458458-458485 5 0.821
NZ_CP011311_2 2.19|592196|28|NZ_CP011311|CRISPRCasFinder,CRT 592196-592223 28 MG883723 Microviridae sp., complete genome 660-687 5 0.821
NZ_CP011311_2 2.21|592324|28|NZ_CP011311|CRISPRCasFinder,CRT,PILER-CR 592324-592351 28 MH015256 Ruegeria phage vB_RpoP-V13, complete genome 23686-23713 5 0.821
NZ_CP011311_2 2.2|591108|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT 591108-591135 28 NZ_CP043441 Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence 1980447-1980474 6 0.786
NZ_CP011311_2 2.2|591108|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT 591108-591135 28 KX066068 Pseudomonas phage VSW-3, complete genome 6567-6594 6 0.786
NZ_CP011311_2 2.2|591108|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT 591108-591135 28 NZ_CP027299 Streptomyces sp. SGAir0924 plasmid unnamed_5 101390-101417 6 0.786
NZ_CP011311_2 2.2|591108|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT 591108-591135 28 NZ_CP007130 Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence 596828-596855 6 0.786
NZ_CP011311_2 2.2|591108|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT 591108-591135 28 NC_023286 Streptomyces sp. F12 plasmid pFRL6, complete sequence 380574-380601 6 0.786
NZ_CP011311_2 2.2|591108|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT 591108-591135 28 NZ_CP029833 Azospirillum ramasamyi strain M2T2B2 plasmid unnamed3, complete sequence 92349-92376 6 0.786
NZ_CP011311_2 2.2|591108|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT 591108-591135 28 NZ_CP040819 Paraoceanicella profunda strain D4M1 plasmid pD4M1A, complete sequence 11249-11276 6 0.786
NZ_CP011311_2 2.2|591108|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT 591108-591135 28 NZ_CP054617 Azospirillum oryzae strain KACC 14407 plasmid unnamed3, complete sequence 298038-298065 6 0.786
NZ_CP011311_2 2.2|591108|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT 591108-591135 28 NZ_CP032685 Rhizobium sp. CCGE531 plasmid pRCCGE531d, complete sequence 782812-782839 6 0.786
NZ_CP011311_2 2.2|591108|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT 591108-591135 28 NZ_CP032690 Rhizobium sp. CCGE532 plasmid pRCCGE532d, complete sequence 782361-782388 6 0.786
NZ_CP011311_2 2.2|591108|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT 591108-591135 28 NC_016587 Azospirillum lipoferum 4B plasmid AZO_p4, complete sequence 310824-310851 6 0.786
NZ_CP011311_2 2.2|591108|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT 591108-591135 28 NC_013858 Azospirillum sp. B510 plasmid pAB510d, complete sequence 256162-256189 6 0.786
NZ_CP011311_2 2.2|591108|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT 591108-591135 28 NZ_CP030074 Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence 131842-131869 6 0.786
NZ_CP011311_2 2.12|591748|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT 591748-591775 28 NZ_CP028919 Gemmobacter sp. HYN0069 plasmid unnamed1, complete sequence 278805-278832 6 0.786
NZ_CP011311_2 2.15|591940|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT 591940-591967 28 MN032740 Leviviridae sp. isolate H1_Rhizo_Litter_3_877 hypothetical protein (H1RhizoLitter3877_000001) gene, partial cds; and hypothetical protein (H1RhizoLitter3877_000002), RNA-dependent RNA polymerase (H1RhizoLitter3877_000003), and hypothetical protein (H1RhizoLitter3877_000004) genes, complete cds 1541-1568 6 0.786
NZ_CP011311_2 2.18|592132|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT 592132-592159 28 NC_010480 Synechococcus sp. PCC 7002 plasmid pAQ6, complete sequence 25735-25762 6 0.786
NZ_CP011311_2 2.18|592132|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT 592132-592159 28 NC_019752 Calothrix sp. PCC 6303 plasmid pCAL6303.03, complete sequence 39474-39501 6 0.786
NZ_CP011311_2 2.19|592196|28|NZ_CP011311|CRISPRCasFinder,CRT 592196-592223 28 NZ_AP012556 Mycobacterium avium subsp. hominissuis TH135 plasmid pMAH135, complete sequence 63590-63617 6 0.786
NZ_CP011311_2 2.19|592196|28|NZ_CP011311|CRISPRCasFinder,CRT 592196-592223 28 NZ_CP023152 Mycobacterium chimaera strain FLAC0070 plasmid pFLAC0070_1, complete sequence 76500-76527 6 0.786
NZ_CP011311_2 2.2|591108|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT 591108-591135 28 NZ_AP022593 Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence 1409728-1409755 7 0.75
NZ_CP011311_2 2.2|591108|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT 591108-591135 28 NZ_CP015740 Shinella sp. HZN7 plasmid pShin-04, complete sequence 161087-161114 7 0.75
NZ_CP011311_2 2.2|591108|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT 591108-591135 28 NC_010510 Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, complete sequence 321583-321610 7 0.75
NZ_CP011311_2 2.2|591108|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT 591108-591135 28 NZ_AP014705 Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence 526596-526623 7 0.75
NZ_CP011311_2 2.2|591108|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT 591108-591135 28 NZ_CP023550 Rhodobacter sp. CZR27 plasmid unnamed2, complete sequence 70758-70785 7 0.75
NZ_CP011311_2 2.2|591108|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT 591108-591135 28 KY945355 Mycobacterium phage Shandong1, complete genome 4102-4129 7 0.75
NZ_CP011311_2 2.2|591108|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT 591108-591135 28 NZ_CP051544 Paracoccus sanguinis strain OM2164 plasmid pPspOM44, complete sequence 38116-38143 7 0.75
NZ_CP011311_2 2.5|591300|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT 591300-591327 28 NZ_AP022593 Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence 4473925-4473952 7 0.75
NZ_CP011311_2 2.11|591684|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT 591684-591711 28 MN234211 Arthrobacter phage Mimi, complete genome 40838-40865 7 0.75
NZ_CP011311_2 2.18|592132|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT 592132-592159 28 NZ_CP027438 Escherichia coli strain 2012C-4221 plasmid unnamed1, complete sequence 54534-54561 7 0.75
NZ_CP011311_2 2.18|592132|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT 592132-592159 28 NZ_CP026754 Escherichia coli strain AR_0077 plasmid tig00000042_pilon, complete sequence 9828-9855 7 0.75
NZ_CP011311_2 2.18|592132|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT 592132-592159 28 NZ_CP051728 Escherichia coli strain SCU-111 plasmid pSCU-111-1, complete sequence 50526-50553 7 0.75
NZ_CP011311_2 2.18|592132|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT 592132-592159 28 NZ_CP023358 Escherichia coli strain 317 plasmid p100, complete sequence 1251-1278 7 0.75
NZ_CP011311_2 2.19|592196|28|NZ_CP011311|CRISPRCasFinder,CRT 592196-592223 28 NC_010311 Streptomyces sp. HK1 plasmid pSHK1, complete sequence 161509-161536 7 0.75
NZ_CP011311_2 2.19|592196|28|NZ_CP011311|CRISPRCasFinder,CRT 592196-592223 28 NC_007950 Polaromonas sp. JS666 plasmid 2, complete sequence 73628-73655 7 0.75
NZ_CP011311_2 2.19|592196|28|NZ_CP011311|CRISPRCasFinder,CRT 592196-592223 28 NC_007950 Polaromonas sp. JS666 plasmid 2, complete sequence 66344-66371 7 0.75
NZ_CP011311_2 2.7|591428|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT 591428-591455 28 NZ_CP040452 Halomonas sp. PA16-9 plasmid p_unnamed1, complete sequence 149187-149214 8 0.714
NZ_CP011311_2 2.15|591940|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT 591940-591967 28 NZ_CP043441 Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence 2550480-2550507 8 0.714
NZ_CP011311_2 2.2|591108|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT 591108-591135 28 NC_019202 Pseudomonas aeruginosa plasmid pKLC102, complete sequence 14620-14647 11 0.607
NZ_CP011311_2 2.2|591108|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT 591108-591135 28 NC_019202 Pseudomonas aeruginosa plasmid pKLC102, complete sequence 15133-15160 12 0.571

1. spacer 2.2|591108|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029832 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed2, complete sequence) position: , mismatch: 4, identity: 0.857

gcaccagctcgcccccggcggcgaggac	CRISPR spacer
gcaccagctcgccgcgggcggcgagatc	Protospacer
************* * *********. *

2. spacer 2.2|591108|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016083 (Streptomyces sp. SAT1 plasmid unnamed3, complete sequence) position: , mismatch: 5, identity: 0.821

gcaccagctcgcccccggcggcgaggac	CRISPR spacer
ccaccggctcgcccccggcggcgacgcg	Protospacer
 ****.****************** *  

3. spacer 2.2|591108|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032324 (Azospirillum brasilense strain MTCC4035 plasmid p3, complete sequence) position: , mismatch: 5, identity: 0.821

gcaccagctcgcccccggcggcgaggac	CRISPR spacer
gacgcagctcgcccccggcgccggggac	Protospacer
*   **************** **.****

4. spacer 2.2|591108|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007797 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p4, complete sequence) position: , mismatch: 5, identity: 0.821

gcaccagctcgcccccggcggcgaggac	CRISPR spacer
ggcgcagctcgcccccggcgccggggac	Protospacer
*   **************** **.****

5. spacer 2.2|591108|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT matches to NC_016624 (Azospirillum lipoferum 4B plasmid AZO_p5, complete sequence) position: , mismatch: 5, identity: 0.821

gcaccagctcgcccccggcggcgaggac	CRISPR spacer
cgaccacctcgcccccggcggcgatggc	Protospacer
  **** ***************** *.*

6. spacer 2.2|591108|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT matches to CP054927 (Streptomyces fulvissimus strain NA06532 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.821

gcaccagctcgcccccggcggcgaggac	CRISPR spacer
cgaccggctcgcccccggcggcgcggtc	Protospacer
  ***.***************** ** *

7. spacer 2.2|591108|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022366 (Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence) position: , mismatch: 5, identity: 0.821

gcaccagctcgcccccggcggcgaggac	CRISPR spacer
ggcgcagctcgcccccggcgccggggac	Protospacer
*   **************** **.****

8. spacer 2.2|591108|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013634 (Rhizobium sp. N324 plasmid pRspN324d, complete sequence) position: , mismatch: 5, identity: 0.821

gcaccagctcgcccccggcggcgaggac	CRISPR spacer
ccaccagctcggccgcggcggcgagatc	Protospacer
 ********** ** **********. *

9. spacer 2.2|591108|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044073 (Pseudomonas oryzihabitans strain FDAARGOS_657 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.821

gcaccagctcgcccccggcggcgaggac	CRISPR spacer
cgaccagctcgccccgggcggccagggc	Protospacer
  ************* ****** ***.*

10. spacer 2.2|591108|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040819 (Paraoceanicella profunda strain D4M1 plasmid pD4M1A, complete sequence) position: , mismatch: 5, identity: 0.821

gcaccagctcgcccccggcggcgaggac	CRISPR spacer
gcaccagctccgccccggcggcggcgaa	Protospacer
**********  ***********. ** 

11. spacer 2.2|591108|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT matches to MH588544 (Caulobacter phage CcrBL10, complete genome) position: , mismatch: 5, identity: 0.821

-gcaccagctcgcccccggcggcgaggac	CRISPR spacer
cgta-tagctcgcccccgacggcgaagac	Protospacer
 *.* .************.******.***

12. spacer 2.2|591108|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 5, identity: 0.821

gcaccagctcgcccccggcggcgaggac	CRISPR spacer
gcaccagctcccgcccggcggcgcgcag	Protospacer
********** * ********** * * 

13. spacer 2.2|591108|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP035092 (Paracoccus denitrificans strain ATCC 19367 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.821

gcaccagctcgcccccggcggcgaggac	CRISPR spacer
gcacgcgctcgcccccggcggcgcaggc	Protospacer
****  ***************** .*.*

14. spacer 2.2|591108|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT matches to NC_008688 (Paracoccus denitrificans PD1222 plasmid 1, complete sequence) position: , mismatch: 5, identity: 0.821

gcaccagctcgcccccggcggcgaggac	CRISPR spacer
gcacgcgctcgcccccggcggcgcaggc	Protospacer
****  ***************** .*.*

15. spacer 2.8|591492|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT matches to KU998244 (Gordonia phage Smoothie, complete genome) position: , mismatch: 5, identity: 0.821

acaaacagccacgtccggagcatggtcc	CRISPR spacer
tccatcagccacgtccagagcatggtct	Protospacer
 * * ***********.**********.

16. spacer 2.19|592196|28|NZ_CP011311|CRISPRCasFinder,CRT matches to NZ_CP017943 (Phyllobacterium zundukense strain Tri-48 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.821

accgggggcaacgacaacaccgcgccag	CRISPR spacer
gccggaggcaacggcaacaccgcgctcg	Protospacer
.****.*******.***********. *

17. spacer 2.19|592196|28|NZ_CP011311|CRISPRCasFinder,CRT matches to MG883723 (Microviridae sp., complete genome) position: , mismatch: 5, identity: 0.821

accgggggcaacgacaacaccgcgccag-	CRISPR spacer
accaggggcaacgacaacacca-gcagga	Protospacer
***.*****************. ** .* 

18. spacer 2.21|592324|28|NZ_CP011311|CRISPRCasFinder,CRT,PILER-CR matches to MH015256 (Ruegeria phage vB_RpoP-V13, complete genome) position: , mismatch: 5, identity: 0.821

gcgaaaatcgacggcaaatcagtcgtct	CRISPR spacer
acaaaactcgacggcaaatccgtcgtcg	Protospacer
.*.*** ************* ****** 

19. spacer 2.2|591108|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.786

gcaccagctcgcccccggcggcgaggac	CRISPR spacer
cgtccggctcgcccccgccggcgaggaa	Protospacer
   **.*********** ********* 

20. spacer 2.2|591108|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT matches to KX066068 (Pseudomonas phage VSW-3, complete genome) position: , mismatch: 6, identity: 0.786

gcaccagctcgcccccggcggcgaggac	CRISPR spacer
tgtccagctcgccaccgtcggcgaggat	Protospacer
   ********** *** *********.

21. spacer 2.2|591108|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027299 (Streptomyces sp. SGAir0924 plasmid unnamed_5) position: , mismatch: 6, identity: 0.786

gcaccagctcgcccccggcggcgaggac	CRISPR spacer
cacccagctcgccccgggcggcgagcgc	Protospacer
   ************ ********* .*

22. spacer 2.2|591108|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007130 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence) position: , mismatch: 6, identity: 0.786

gcaccagctcgcccccggcggcgaggac	CRISPR spacer
tccacagctcgcccccgccggccaggag	Protospacer
 *  ************* **** **** 

23. spacer 2.2|591108|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT matches to NC_023286 (Streptomyces sp. F12 plasmid pFRL6, complete sequence) position: , mismatch: 6, identity: 0.786

gcaccagctcgcccccggcggcgaggac	CRISPR spacer
ccgccagcccgcctccggcggcgaggtt	Protospacer
 *.*****.****.************ .

24. spacer 2.2|591108|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029833 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed3, complete sequence) position: , mismatch: 6, identity: 0.786

gcaccagctcgcccccggcggcgaggac	CRISPR spacer
ccaccagctccgccccggcggcgaccgc	Protospacer
 *********  ************  .*

25. spacer 2.2|591108|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040819 (Paraoceanicella profunda strain D4M1 plasmid pD4M1A, complete sequence) position: , mismatch: 6, identity: 0.786

gcaccagctcgcccccggcggcgaggac	CRISPR spacer
gcaccagcgcgccgccggcggcggcgtt	Protospacer
******** **** *********. * .

26. spacer 2.2|591108|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054617 (Azospirillum oryzae strain KACC 14407 plasmid unnamed3, complete sequence) position: , mismatch: 6, identity: 0.786

gcaccagctcgcccccggcggcgaggac	CRISPR spacer
ccatcagctcggccccggcggcgaccgc	Protospacer
 **.******* ************  .*

27. spacer 2.2|591108|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032685 (Rhizobium sp. CCGE531 plasmid pRCCGE531d, complete sequence) position: , mismatch: 6, identity: 0.786

gcaccagctcgcccccggcggcgaggac	CRISPR spacer
gccccagctcgccgccggcggcgcgatg	Protospacer
** ********** ********* *.  

28. spacer 2.2|591108|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032690 (Rhizobium sp. CCGE532 plasmid pRCCGE532d, complete sequence) position: , mismatch: 6, identity: 0.786

gcaccagctcgcccccggcggcgaggac	CRISPR spacer
gccccagctcgccgccggcggcgcgatg	Protospacer
** ********** ********* *.  

29. spacer 2.2|591108|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT matches to NC_016587 (Azospirillum lipoferum 4B plasmid AZO_p4, complete sequence) position: , mismatch: 6, identity: 0.786

gcaccagctcgcccccggcggcgaggac	CRISPR spacer
ccaccagctccgccccggcggcgaccgc	Protospacer
 *********  ************  .*

30. spacer 2.2|591108|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT matches to NC_013858 (Azospirillum sp. B510 plasmid pAB510d, complete sequence) position: , mismatch: 6, identity: 0.786

gcaccagctcgcccccggcggcgaggac	CRISPR spacer
ccaccagctccgccccggcggcgaccgc	Protospacer
 *********  ************  .*

31. spacer 2.2|591108|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030074 (Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.786

gcaccagctcgcccccggcggcgaggac	CRISPR spacer
ggtcgagctcgcccccggcgtcgaggca	Protospacer
*  * *************** *****  

32. spacer 2.12|591748|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028919 (Gemmobacter sp. HYN0069 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.786

cgaagtttccattgtcacggttcaagtg	CRISPR spacer
cgaagtttccgttgtcacggtcgaccag	Protospacer
**********.**********. *   *

33. spacer 2.15|591940|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT matches to MN032740 (Leviviridae sp. isolate H1_Rhizo_Litter_3_877 hypothetical protein (H1RhizoLitter3877_000001) gene, partial cds; and hypothetical protein (H1RhizoLitter3877_000002), RNA-dependent RNA polymerase (H1RhizoLitter3877_000003), and hypothetical protein (H1RhizoLitter3877_000004) genes, complete cds) position: , mismatch: 6, identity: 0.786

ccttaccacgtggtggaagtgccggagg	CRISPR spacer
gcttacctcgtggtggatgtgccgaacc	Protospacer
 ****** ********* ******.*  

34. spacer 2.18|592132|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT matches to NC_010480 (Synechococcus sp. PCC 7002 plasmid pAQ6, complete sequence) position: , mismatch: 6, identity: 0.786

agcaacagcaaccatcaaagaaaactca	CRISPR spacer
aaaaacagcactcatcaaagaaaactgg	Protospacer
*. ******* .************** .

35. spacer 2.18|592132|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT matches to NC_019752 (Calothrix sp. PCC 6303 plasmid pCAL6303.03, complete sequence) position: , mismatch: 6, identity: 0.786

agcaacagcaaccatcaaagaaaactca	CRISPR spacer
agcaacagcaaccaccatagaaagtaaa	Protospacer
**************.** *****..  *

36. spacer 2.19|592196|28|NZ_CP011311|CRISPRCasFinder,CRT matches to NZ_AP012556 (Mycobacterium avium subsp. hominissuis TH135 plasmid pMAH135, complete sequence) position: , mismatch: 6, identity: 0.786

accgggggcaacgacaacaccgcgccag	CRISPR spacer
tccggggccaacgacagcaccgcgacca	Protospacer
 ****** ********.******* * .

37. spacer 2.19|592196|28|NZ_CP011311|CRISPRCasFinder,CRT matches to NZ_CP023152 (Mycobacterium chimaera strain FLAC0070 plasmid pFLAC0070_1, complete sequence) position: , mismatch: 6, identity: 0.786

accgggggcaacgacaacaccgcgccag	CRISPR spacer
tccggggccaacgacagcaccgcgacca	Protospacer
 ****** ********.******* * .

38. spacer 2.2|591108|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 7, identity: 0.75

gcaccagctcgcccccggcggcgaggac	CRISPR spacer
tgtccagctcgcccgcggcgacgaggcg	Protospacer
   *********** *****.*****  

39. spacer 2.2|591108|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015740 (Shinella sp. HZN7 plasmid pShin-04, complete sequence) position: , mismatch: 7, identity: 0.75

gcaccagctcgcccccggcggcgaggac	CRISPR spacer
gccccagctcgccgccggcggcggcacg	Protospacer
** ********** *********. .  

40. spacer 2.2|591108|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT matches to NC_010510 (Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, complete sequence) position: , mismatch: 7, identity: 0.75

gcaccagctcgcccccggcggcgaggac	CRISPR spacer
ctaccagctcgcgcccggcgtcgagacg	Protospacer
 .********** ******* ****.  

41. spacer 2.2|591108|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014705 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence) position: , mismatch: 7, identity: 0.75

gcaccagctcgcccccggcggcgaggac	CRISPR spacer
cgcccggctcgcgcccggcggcgaggtg	Protospacer
   **.****** *************  

42. spacer 2.2|591108|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023550 (Rhodobacter sp. CZR27 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.75

gcaccagctcgcccccggcggcgaggac	CRISPR spacer
gcaccagctcgcccccgcgggcgccctt	Protospacer
*****************  ****    .

43. spacer 2.2|591108|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT matches to KY945355 (Mycobacterium phage Shandong1, complete genome) position: , mismatch: 7, identity: 0.75

gcaccagctcgcccccggcggcgaggac	CRISPR spacer
cggtcagctcgcccgcggcgccgaggaa	Protospacer
  ..********** ***** ****** 

44. spacer 2.2|591108|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP051544 (Paracoccus sanguinis strain OM2164 plasmid pPspOM44, complete sequence) position: , mismatch: 7, identity: 0.75

gcaccagctcgcccccggcggcgaggac	CRISPR spacer
gcaccagctcggccacggcggcggccca	Protospacer
*********** ** ********.    

45. spacer 2.5|591300|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 7, identity: 0.75

ctgggccttatcctcggttgccacctcg	CRISPR spacer
gagggcctgatcctcggttgccaggcca	Protospacer
  ****** **************  .*.

46. spacer 2.11|591684|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT matches to MN234211 (Arthrobacter phage Mimi, complete genome) position: , mismatch: 7, identity: 0.75

ccaacacaccaccaaccaataacaaaca	CRISPR spacer
gaatagaactaccaaccaataacaaaca	Protospacer
  *  . **.******************

47. spacer 2.18|592132|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027438 (Escherichia coli strain 2012C-4221 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.75

agcaacagcaaccatcaaagaaaactca	CRISPR spacer
tcttgcagcaacaataaaagaaaactca	Protospacer
  . .******* ** ************

48. spacer 2.18|592132|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026754 (Escherichia coli strain AR_0077 plasmid tig00000042_pilon, complete sequence) position: , mismatch: 7, identity: 0.75

agcaacagcaaccatcaaagaaaactca	CRISPR spacer
tcttgcagcaacaataaaagaaaactca	Protospacer
  . .******* ** ************

49. spacer 2.18|592132|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP051728 (Escherichia coli strain SCU-111 plasmid pSCU-111-1, complete sequence) position: , mismatch: 7, identity: 0.75

agcaacagcaaccatcaaagaaaactca	CRISPR spacer
tcttgcagcaacaataaaagaaaactca	Protospacer
  . .******* ** ************

50. spacer 2.18|592132|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023358 (Escherichia coli strain 317 plasmid p100, complete sequence) position: , mismatch: 7, identity: 0.75

agcaacagcaaccatcaaagaaaactca	CRISPR spacer
tcttgcagcaacaataaaagaaaactca	Protospacer
  . .******* ** ************

51. spacer 2.19|592196|28|NZ_CP011311|CRISPRCasFinder,CRT matches to NC_010311 (Streptomyces sp. HK1 plasmid pSHK1, complete sequence) position: , mismatch: 7, identity: 0.75

accgggggcaacgacaacaccgcgccag	CRISPR spacer
ggcgggggcgacgacgacaccgcgcatc	Protospacer
. *******.*****.*********   

52. spacer 2.19|592196|28|NZ_CP011311|CRISPRCasFinder,CRT matches to NC_007950 (Polaromonas sp. JS666 plasmid 2, complete sequence) position: , mismatch: 7, identity: 0.75

accgggggcaacgacaacaccgcgccag	CRISPR spacer
ggcgtggtcaacgacaacaccgcgctcc	Protospacer
. ** ** *****************.  

53. spacer 2.19|592196|28|NZ_CP011311|CRISPRCasFinder,CRT matches to NC_007950 (Polaromonas sp. JS666 plasmid 2, complete sequence) position: , mismatch: 7, identity: 0.75

accgggggcaacgacaacaccgcgccag	CRISPR spacer
ggcgtggtcaacgacaacaccgcgctcc	Protospacer
. ** ** *****************.  

54. spacer 2.7|591428|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040452 (Halomonas sp. PA16-9 plasmid p_unnamed1, complete sequence) position: , mismatch: 8, identity: 0.714

ataccaatcggcaactacatcaccctaa	CRISPR spacer
ccgggcatcggcaactacatcaccctcg	Protospacer
 ..   ******************** .

55. spacer 2.15|591940|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.714

ccttaccacgtggtggaagtgccggagg	CRISPR spacer
ggcctgtacgtggtggaggtgccggagg	Protospacer
  ..  .**********.**********

56. spacer 2.2|591108|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT matches to NC_019202 (Pseudomonas aeruginosa plasmid pKLC102, complete sequence) position: , mismatch: 11, identity: 0.607

gcaccagctcgcccccggcggcgaggac----	CRISPR spacer
----aacctcggcgccggcggcgagctgggtg	Protospacer
     * **** * ***********       

57. spacer 2.2|591108|28|NZ_CP011311|PILER-CR,CRISPRCasFinder,CRT matches to NC_019202 (Pseudomonas aeruginosa plasmid pKLC102, complete sequence) position: , mismatch: 12, identity: 0.571

gcaccagctcgcccccggcggcgaggac----	CRISPR spacer
----ggcctcggcgccggcggcgagctgggtg	Protospacer
     . **** * ***********       

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1855541 : 1879782 23 Shigella_phage(11.11%) tRNA,transposase,protease NA
DBSCAN-SWA_2 1951336 : 1974365 25 Bacillus_virus(20.0%) integrase,transposase,tRNA,protease attL 1945722:1945736|attR 1976935:1976949
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage