CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_CP011316	Klebsiella pneumoniae subsp. pneumoniae strain 234-12 plasmid pKpn23412-4, complete sequence	0 crisprs	NA	0	0
NZ_CP011314	Klebsiella pneumoniae subsp. pneumoniae strain 234-12 plasmid pKpn23412-362, complete sequence	2 crisprs	csa3,DinG,TnsE_C,c2c9_V-U4	3	4
NZ_CP011313	Klebsiella pneumoniae subsp. pneumoniae strain 234-12 chromosome, complete genome	3 crisprs	csa3,cas3,DEDDh,DinG,WYL	0	7
NZ_CP011315	Klebsiella pneumoniae subsp. pneumoniae strain 234-12 plasmid pKpn2312-5, complete sequence	0 crisprs	NA	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP011314_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011314_1

142491-142578

Orphan

Consensus_repeat	Method
CGGGGGGAATACTTCCAGCCAGCGGGT	CRISPRCasFinder

1 spacers

DinG

The CRISPR arrays of NZ_CP011314_1

>merge|NZ_CP011314|1|142491-142578|CRISPRCasFinder
CGGGGGGAATACTTCCAGCCAGCGGGTAACCGTGGACAACACGACCGATAACCCCCGCACACGGGGGGAATACTTCCAGCCAGCGGGT

>NZ_CP011314|1|1|142491-142578|CRISPRCasFinder
CGGGGGGAATACTTCCAGCCAGCGGGT	AACCGTGGACAACACGACCGATAACCCCCGCACA
CGGGGGGAATACTTCCAGCCAGCGGGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011314.1\|WP_004883245.1\|149620_150016_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011314.1\|WP_046654911.1\|134055_134832_+\|phage-integrase-family-protein	unknown	unknown	gnl\|CDD\|334163
NZ_CP011314.1\|WP_004197663.1\|146872_147664_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011314.1\|WP_004181864.1\|143725_144433_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011314.1\|WP_004883274.1\|144426_146301_-\|DEAD/DEAH-box-helicase	DinG	COG1199_DinG_CAS-IV-A	gnl\|CDD\|224120
NZ_CP011314.1\|WP_016947074.1\|148763_149174_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011314.1\|WP_004197662.1\|146303_146870_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	unknown	unknown	gnl\|CDD\|187858
NZ_CP011314.1\|WP_004883268.1\|147726_148140_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224051
NZ_CP011314.1\|WP_004026357.1\|138244_138688_-\|DUF2384-domain-containing-protein	unknown	unknown	gnl\|CDD\|131346
NZ_CP011314.1\|WP_046654908.1\|132089_132320_-\|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|226863
NZ_CP011314.1\|WP_004181894.1\|138787_140059_-\|translesion-error-prone-DNA-polymerase-V-subunit-UmuC	unknown	unknown	gnl\|CDD\|179607
NZ_CP011314.1\|WP_046654912.1\|135269_136610_-\|ISNCY-family-transposase	unknown	unknown	gnl\|CDD\|379256
NZ_CP011314.1\|WP_110247212.1\|133246_134056_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011314.1\|WP_004181891.1\|142689_143481_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|369811
NZ_CP011314.1\|WP_046654909.1\|132865_133168_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011314.1\|WP_004026352.1\|137408_137669_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011314.1\|WP_004883249.1\|149203_149611_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011314.1\|WP_004026354.1\|137777_138248_-\|RES-family-NAD+-phosphorylase	unknown	unknown	gnl\|CDD\|378053
NZ_CP011314.1\|WP_004181893.1\|140058_140481_-\|translesion-error-prone-DNA-polymerase-V-autoproteolytic-subunit	unknown	unknown	gnl\|CDD\|182350
NZ_CP011314.1\|WP_046654913.1\|148223_148712_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP011314.1\|WP_004883268.1\|147726_148140_-\|hypothetical-protein	gnl\|CDD\|224051	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism].	0.00190269
NZ_CP011314.1\|WP_046654911.1\|134055_134832_+\|phage-integrase-family-protein	gnl\|CDD\|334163	pfam00589, Phage_integrase, Phage integrase family. Members of this family cleave DNA substrates by a series of staggered cuts, during which the protein becomes covalently linked to the DNA through a catalytic tyrosine residue at the carboxy end of the alignment. The catalytic site residues in CRE recombinase are Arg-173, His-289, Arg-292 and Tyr-324.	3.88127e-39
NZ_CP011314.1\|WP_046654908.1\|132089_132320_-\|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein	gnl\|CDD\|226863	COG4456, VagC, Virulence-associated protein and related proteins [Function unknown].	8.39818e-11
NZ_CP011314.1\|WP_004181891.1\|142689_143481_-\|hypothetical-protein	gnl\|CDD\|369811	pfam08317, Spc7, Spc7 kinetochore protein. This domain is found in cell division proteins which are required for kinetochore-spindle association.	0.000936611
NZ_CP011314.1\|WP_004197662.1\|146303_146870_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|187858	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6e is an endoribonuclease that generates crRNA; This family is specific for CRISPR/Cas system I-E subtype; Homologous to Cas6 (RAMP superfamily protein); Possesses double RRM/ferredoxin fold; also known as Cse3 family.	0.000201514
NZ_CP011314.1\|WP_004883274.1\|144426_146301_-\|DEAD/DEAH-box-helicase	gnl\|CDD\|224120	COG1199, DinG, Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair].	1.62678e-35
NZ_CP011314.1\|WP_004026357.1\|138244_138688_-\|DUF2384-domain-containing-protein	gnl\|CDD\|131346	TIGR02293, conserved_protein_of_unknown_function, putative toxin-antitoxin system antitoxin component, TIGR02293 family. Proteins in this family are found almost exclusively in the Proteobacteria, but also in Gloeobacter violaceus PCC 7421, a cyanobacterium. This family was proposed by Makarova, et al. (2009) to be the antitoxin component of a new class of type 2 toxin-antitoxin system, or addiction module. [Cellular processes, Other].	9.79715e-30
NZ_CP011314.1\|WP_004026354.1\|137777_138248_-\|RES-family-NAD+-phosphorylase	gnl\|CDD\|378053	pfam08808, RES, RES domain. This presumed domain contains 3 highly conserved polar groups that could form an active site. These are an arginine, glutamate and serine, hence the RES domain. The domain is found widely distributed in bacteria. The domain is about 150 residues in length.	8.22357e-28
NZ_CP011314.1\|WP_004181893.1\|140058_140481_-\|translesion-error-prone-DNA-polymerase-V-autoproteolytic-subunit	gnl\|CDD\|182350	PRK10276, PRK10276, translesion error-prone DNA polymerase V autoproteolytic subunit.	2.45197e-57
NZ_CP011314.1\|WP_004181894.1\|138787_140059_-\|translesion-error-prone-DNA-polymerase-V-subunit-UmuC	gnl\|CDD\|179607	PRK03609, umuC, translesion error-prone DNA polymerase V subunit UmuC.	0
NZ_CP011314.1\|WP_046654912.1\|135269_136610_-\|ISNCY-family-transposase	gnl\|CDD\|379256	pfam13551, HTH_29, Winged helix-turn helix. This helix-turn-helix domain is often found in transferases and is likely to be DNA-binding.	6.30201e-07

>NZ_CP011314.1|WP_004181893.1|140058_140481_-|translesion-error-prone-DNA-polymerase-V-autoproteolytic-subunit
MFLIPMENPEKIAIPLFLERCAAGFPSPAQDYTSSELDLNDYCIRHPSATYFVRAQGNSMQDVGMRDGDLLVVDRSLRPQHRDIVIAEVDGGFTVKQLQTTPRLALLPMNNAYSPIYPDPDELTIFGVVTHWVHRARGNL
>NZ_CP011314.1|WP_004181894.1|138787_140059_-|translesion-error-prone-DNA-polymerase-V-subunit-UmuC
MYALADVNSFYCSVEKCFRPDLRDKPVVVLSNNDGCVIARCKLAKKFGIPMGLPWFKLREQRFPEPVIAFSSNYELYASMSARVHFCLEELSSRVEEYSIDESFIWAGGIDNCMTFEEYGHQLRDHVFRCTGLTIGVGLAPTKTLAKACQYSSKTWPQFGGVLALTAGQRNRIDKMLSLMPVEEVWGVGGRTTSKLHAMGITTALELARTNPAFIRRNFTVVLERTVRELRGESCIDLEDAPPPKQQIICSRSFGQRITTYESMRQAICQYAERAAEKLRQERQYCGQVSVFIKTSPFSKHEPYYSKVSSEQLCIPSRDTRDIIAAAGRALDKIWKEGHNYAKAGVMLNDFRPCGVTQLSLFDEGRSYANSDALMNVLDTINNSGKGKVWFAGRGIAPAWSMKRDMLSPAYTTRWDSIPIATL
>NZ_CP011314.1|WP_004026357.1|138244_138688_-|DUF2384-domain-containing-protein
MKTFSLSSTPARPQRLWQVAGLNNADGVALLGQINEGLDGKVANRITDWARITQNDLRKMSGIPSTTFSRSVKARFNPEQSERLVRIIRVIDRAVDLFEGDKEAAQKWLNEPNRALSWKVPADLMASETGAYEVIKLITRLEHGVYS
>NZ_CP011314.1|WP_004026354.1|137777_138248_-|RES-family-NAD+-phosphorylase
MILYRLTKTKYLSTAWTGYGAKEAGGRWNSVGVSMVYVSETASLTMLETLVHLHAAQIMDSFTLLSIDVPDELIQSANMDELPGNWADEDAPQELADYGDAWSFTRSSVALRVPSALSPVEFNYLLNPEHPEFYGIVQKAQQIPFRFDSRLKPDRK
>NZ_CP011314.1|WP_004026352.1|137408_137669_+|hypothetical-protein
MTLTAYYQLRNTKAAGLGFELLTSEPGAFIVLEECSYEKPYEIARYGHNGSAGDRSNAFSCAMNKARSLQNYSGAKLDYNVYEETA
>NZ_CP011314.1|WP_046654912.1|135269_136610_-|ISNCY-family-transposase
MRKETVTMSYKELDRLQIIQGSVNRHITQEQAALRMGISVRQVKRLVYRYRNEGPAGLVSRRRGKRPNNAFTPEFKSTVISLLKERYSDFGPTLASEKLREVHGLSLSTETLRKWMVEAGLWRERRRKIARIYQRRMRRPSYGELIQIDGSPHDWFEARGPRCTLIVFIDDATSALMALRFAPAETTRAYMETLRGYLTDHGVPLALYSDRHSIFRVNNPEREGELTQFTRAIKTLGIEPIHANTPQAKGRVERANQTLQDRLVKELRLQGISDIETANAWLPEFIEAYNNRFATAPRDSANAHLDVHHSEEELNHIFSYQAKRILSKNLTFQYKTSAFQIRSEGRGYRLRHSVVTVCENFEGEIAVLYEGRVLGWEKYVDGPEPIPLDDEKSVHERVDRARVNLRSKYYVKPKADHPWQTRRTQSHEQAKPPRLPARKSGVDKPD
>NZ_CP011314.1|WP_046654911.1|134055_134832_+|phage-integrase-family-protein
MTGIISYGQHQAPVMSLPVAIDYPAALALRQMALMHDALPKYLLAPEVSALLHYVPDLHRRTLFATLWNTGARINEALALTWPDFLLAPPYPFVQLATLKQRTEKAARTAGRAPAGSQTHRLVPLSDEQYVSQLEMMVATLKIPLERRNKRTGRTEKARIWEITDRTVRTWLNEAVEAAATDGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTELYTKVFALDVAARHRVQFMMPGSDAVTMLRGS
>NZ_CP011314.1|WP_110247212.1|133246_134056_+|hypothetical-protein
MKDYMLDLEAERFKEWFAEQYPDAQPGGEEWEQAGLLYYWEQEALADKAQWDYERGLFVASLNNVHQRYVHANQELKKLYALLDNEQPELVYRMSFVHAVTVMEAYLMYCARALLEHDSPLKRFRDEYYLKSERVKKSEKHSACEMELHMFRPAARNYVSRMTFHNVKTIERYFGAVLHIPPIWPVKPLGIIADWRNDLVHRNGVDEFDEPRSISVHQLQNALQKVSDLIEAADMSLCLEVDYFGNWRNEENREIIASGLRIIPDGDAS
>NZ_CP011314.1|WP_046654909.1|132865_133168_+|hypothetical-protein
MPKTLKEVCDTLINKYGHQALWLDMRSGANGPGLYQSKQPVVISCSRRDLAEHDGKKWHLLNSPRYLDFDPVDDSVNSITATDIYLDDAAIETYMHWNSL
>NZ_CP011314.1|WP_046654908.1|132089_132320_-|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein
MRTVSIFKNGNNRAIRLPRDLDFEGVSELEIVREGDSIILRPVRPTWGSFAQFEKADPDFMAEREDVVSDEGRFDL
>NZ_CP011314.1|WP_004181891.1|142689_143481_-|hypothetical-protein
MLAQGVDINGEAETFAPGEINAGAELRSKNPLISLFGRWGLSGKVGIGNAIPDGDNQWGMFGGGARSIMFQRDESLMEFLETDQVDRLERLLEEQAEASVDISQIKTEQDALKKAMKSADKDTKAELQIKVRELDEKIQARKDQKQESRESIRRPIDPYEAFITGAELSHRMSIKNATDEEAGLFISALIRFAAEPRFGGHANHNCGLVEAHWTVTTWKPGELVPVTLGEIVITPNGVEITGDELFAMVKAFNENQSFDFTAR
>NZ_CP011314.1|WP_004181864.1|143725_144433_-|hypothetical-protein
MLNFKPYRVIMSSLTPVVISGIAPSLDGILYEALSQAIPSNEPGVVLARLKEILLFNDELGVFHASSLRFGITPEQGIGATTSVRCDYLSPEKLSTAMFSPRIHRGVFTRVLLTGGPTKRRMTTRPAYSAPYLTFDFVGSSEAVEILLNHAHVGVGYDFFSAANGEFNNVTILPLDIDTSISNEGMALRPVPVNSGLNGIKGVSPLIPPYFVGEKLNIVHPAPVRTQLISSLLRG
>NZ_CP011314.1|WP_004883274.1|144426_146301_-|DEAD/DEAH-box-helicase
MNTSAVFESAGLSLRKVQQDYIEAAAGALTQDHKVALISAETGVGKTLGYLVPALLILLKNPEAKFVIATNSHALMHQIFRSDRPLLEQIAEQCGIKVTFSRLMGKANYVSLEKVRGLLLMDEFTDLDTVKVLEKLANWSKPLVEFEEEYGELPAQITPEMVTYSIWDDIQDIDDIRLNALSANFIVTTHAMVMVDCMCNHRILGDKENMYLIIDEADIFVDMLEVWKQRRFNLRELTSAFNEHIPRNGVHVIDQLMNDVTSIAGDLHFCSTPAAVALFDNSFNALSKVGREIKNEAARKAFFDCIYSWEMLGLSGGQKGVGVSNKRREPALIAVNPFIGMNVGRYCTQWRSALLTSATLSITSTPETGMEWLCKALGLTSDTISIRKIFSPDVYGSMKLTIAGADFPKVFNDPKEQIFSGQWLKAVVEQLSCIQGPALVLTASHYETRMIANQLGEVSQPVYIQKAGQALSEIIKQYQEIPGILISAGASVGVSPRGENGEQIFQDLIITRIPFLPPDRMKAESLYGYLKERGYSRTFEAVNRNIYLDNLRKVIRKAKQSIGRGIRSENDTVRIIILDPRFPEPTDLSSKHRSLEHIIPVRFRRAYRSCEILSPAYCEEDIQC
>NZ_CP011314.1|WP_004197662.1|146303_146870_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MIYYDNAFRLRIRHTSVYQIHQHLDFFMQERKGEKLPYSFKIFPGTGDDSLLLVRTATALELPGEKKRELILSEGHEIKFITSMAIFHKGTKSEGRGRRQFAPSEEASYQLALTKLAKAGFKPGQIVVSGPKFVHIVKGNAGRGFTLPVFTVQGTAIISNQQEAEVGIVYGVGPKRVFGCGFMHLAGQ
>NZ_CP011314.1|WP_004197663.1|146872_147664_-|hypothetical-protein
MNHPVESVYSALTSILLPYMGEPVPVQRNCSCCGRAPSEFDGVGFELVNAYRERVVHCRPCQTFFVSAPELMGVENPKKPTTGQKFGMWSGVGAVINVEDNSSVLLAPQGVVNKLPEHFFDHVEVITATSGQHLEYLFNTELKFPLIYIQNFGVKTYELVRSLRVSLSADAIYTCADQLLTRQNEVLYMLDLTKAKELHQEIKNYSKKEIDIFIRTVTLLAYSRITPEAASNEFKKNNLIPLLLLLPTDPHQRLSILHLLKKV
>NZ_CP011314.1|WP_004883268.1|147726_148140_-|hypothetical-protein
MKFNNNQNEKCLNKVLSFFSEKDTNLIVVIIGPSGSGKTLLAKRALIEGLFISPEEPIASEEFIQSLSNKDIIIDDVVLFDVRNVLKYVLHSLASGRKVILTGRPEDESLYQKLLLNLPKEISPFFIKLVGENSLYL
>NZ_CP011314.1|WP_046654913.1|148223_148712_-|hypothetical-protein
MNLDKNLPALVMKNLEDNMGVITKYLKQTEDNALVFIIGETGSGKSCLAELEFPDALYPTAQQFEECDHISEMFTGFDVVIDDIFRFDADKVLECILAVHASGHKVLVTGQPSDHELCIGLMSRLPVGYRTMYVTLMGHQDLQEMSGDGKDKGNSETKIVLH
>NZ_CP011314.1|WP_016947074.1|148763_149174_-|hypothetical-protein
MTQSEITVNSFWDWGTSLLTSNGAVIFYALLVVLVLGAVLFKDFSLLTTFASGLAGIALLCGVMSVLVVLVLASDQKEQDWRDFAAEHCKVIEKREGATTTGVGVSLKGQAGVFIGGEPDQTGYLCDDGVTYWKNE
>NZ_CP011314.1|WP_004883249.1|149203_149611_-|hypothetical-protein
MKGINQSNGNHLKFLYGVTSTDRLIQHEHADKFIDSCISNIGSIHKMSLTCYRAGGPLTELVLFYGSDKTFSITIGVGDVDVSMVNEDDIRISHKQITLPDTTDTLILVTRIARRSGLKPMLPEAEQFSTVLDFV
>NZ_CP011314.1|WP_004883245.1|149620_150016_-|hypothetical-protein
MAFIKGSLFFIIMVLLVYGATGLNAKESIVFAAFGFGISAILCSFVGIMGVLVVTMCLFAFEELGALPRLFGAQIILIALWNLILTVVLPDGKARTILGFDLYNISSYLLYGMTVLLGIGSVAMLFNKNNS

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Crispr_ID: NZ_CP011314_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011314_2

172036-172175

Orphan

Consensus_repeat	Method
CCCAGTTCCCAACTATTTTGTCA	PILER-CR

2 spacers

TnsE_C

The CRISPR arrays of NZ_CP011314_2

>merge|NZ_CP011314|2|172036-172175|PILER-CR
AGTTCCAAACTATTTTGTCATTTTTAATTTTCGTATTAGCTTACGACGCTACACCCAGTTCCCATCTATTTTGTCACTCTTCCCTAAATAATCCTTAAAAACTCCATTTCCACCCCTCCCAGTTCCCAACTATTTTGTCC

>NZ_CP011314|2|1|172036-172175|PILER-CR
AGTTCCAAACTATTTTGTCATTT	TTAATTTTCGTATTAGCTTACGACGCTACACCC
AGTTCCCATCTATTTTGTCACTC	TTCCCTAAATAATCCTTAAAAACTCCATTTCCACCCCTCCC
AGTTCCCAACTATTTTGTCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011314.1\|WP_046654966.1\|173920_174517_-\|DUF551-domain-containing-protein	unknown	unknown	gnl\|CDD\|367946
NZ_CP011314.1\|WP_000497519.1\|170919_171246_+\|tyrosine-type-recombinase/integrase	unknown	unknown	gnl\|CDD\|131303
NZ_CP011314.1\|WP_158423360.1\|175420_175756_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011314.1\|WP_000119696.1\|166691_167063_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011314.1\|WP_000251879.1\|164057_165674_+\|transposase	TnsE_C	TnsE	gnl\|CDD\|376049
NZ_CP011314.1\|WP_004141386.1\|176283_176496_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011314.1\|WP_162487916.1\|172634_172796_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011314.1\|WP_046654918.1\|173723_173918_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011314.1\|WP_032719523.1\|176902_177418_-\|DUF262-domain-containing-protein	unknown	unknown	gnl\|CDD\|377008
NZ_CP011314.1\|WP_001353740.1\|171433_171673_-\|DUF1819-family-protein	unknown	unknown	gnl\|CDD\|378066
NZ_CP011314.1\|WP_000071896.1\|170268_170805_+\|class-2-integron-integrase-IntI2	unknown	unknown	gnl\|CDD\|131303
NZ_CP011314.1\|WP_000704156.1\|167689_168214_-\|streptothricin-N-acetyltransferase-Sat2	unknown	unknown	gnl\|CDD\|366181
NZ_CP011314.1\|WP_004197220.1\|173215_173422_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011314.1\|WP_004197207.1\|172859_173132_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011314.1\|WP_004176137.1\|169170_170202_+\|IS630-like-element-ISEc33-family-transposase	unknown	unknown	gnl\|CDD\|315923
NZ_CP011314.1\|WP_016947068.1\|174600_175083_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011314.1\|WP_001444089.1\|167123_167621_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011314.1\|WP_001271300.1\|165904_166282_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011314.1\|WP_046654917.1\|172291_172579_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011314.1\|WP_000777554.1\|168308_168782_-\|trimethoprim-resistant-dihydrofolate-reductase-DfrA1	unknown	unknown	gnl\|CDD\|238127

Protein	Function_ID	Function_description	E-value
NZ_CP011314.1\|WP_046654966.1\|173920_174517_-\|DUF551-domain-containing-protein	gnl\|CDD\|367946	pfam04448, DUF551, Protein of unknown function (DUF551). This family represents the carboxy terminus of a protein of unknown function, found in dsDNA viruses with no RNA stage, including bacteriophages lambda and P22, and also in some Escherichia coli prophages.	1.75465e-08
NZ_CP011314.1\|WP_001353740.1\|171433_171673_-\|DUF1819-family-protein	gnl\|CDD\|378066	pfam08849, DUF1819, Putative inner membrane protein (DUF1819). These proteins are functionally uncharacterized. Several are annotated as putative inner membrane proteins.	2.15941e-15
NZ_CP011314.1\|WP_000497519.1\|170919_171246_+\|tyrosine-type-recombinase/integrase	gnl\|CDD\|131303	TIGR02249, Integrase/recombinase_E2_protein., integron integrase. Members of this family are integrases associated with integrons (and super-integrons), which are systems for incorporating and expressing cassettes of laterally transferred DNA. Incorporation occurs at an attI site. A super-integron, as in Vibrio sp., may include over 100 cassettes. This family belongs to the phage integrase family (pfam00589) that also includes recombinases XerC (TIGR02224) and XerD (TIGR02225), which are bacterial housekeeping proteins. Within this family of integron integrases, some are designated by class, e.g. IntI4, a class 4 integron integrase from Vibrio cholerae N16961. [DNA metabolism, DNA replication, recombination, and repair, Mobile and extrachromosomal element functions, Other].	2.82591e-45
NZ_CP011314.1\|WP_000704156.1\|167689_168214_-\|streptothricin-N-acetyltransferase-Sat2	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	4.87486e-19
NZ_CP011314.1\|WP_000251879.1\|164057_165674_+\|transposase	gnl\|CDD\|376049	pfam18623, TnsE_C, TnsE C-terminal domain. The bacterial transposon Tn7 facilitates horizontal transfer by directing transposition into actively replicating DNA with the element-encoded protein TnsE. Structural analysis of the C-terminal domain of TnsE identified a central V-shaped loop that toggles between two distinct conformations. It is suggested that a conformational change within the C-terminal domain of TnsE underlies target site selection by regulating stable engagement of the target DNA while providing a signal for activating transposition.	6.8797e-67
NZ_CP011314.1\|WP_004176137.1\|169170_170202_+\|IS630-like-element-ISEc33-family-transposase	gnl\|CDD\|315923	pfam13358, DDE_3, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	2.25225e-17
NZ_CP011314.1\|WP_032719523.1\|176902_177418_-\|DUF262-domain-containing-protein	gnl\|CDD\|377008	pfam03235, DUF262, Protein of unknown function DUF262.	6.9235e-14
NZ_CP011314.1\|WP_000071896.1\|170268_170805_+\|class-2-integron-integrase-IntI2	gnl\|CDD\|131303	TIGR02249, Integrase/recombinase_E2_protein., integron integrase. Members of this family are integrases associated with integrons (and super-integrons), which are systems for incorporating and expressing cassettes of laterally transferred DNA. Incorporation occurs at an attI site. A super-integron, as in Vibrio sp., may include over 100 cassettes. This family belongs to the phage integrase family (pfam00589) that also includes recombinases XerC (TIGR02224) and XerD (TIGR02225), which are bacterial housekeeping proteins. Within this family of integron integrases, some are designated by class, e.g. IntI4, a class 4 integron integrase from Vibrio cholerae N16961. [DNA metabolism, DNA replication, recombination, and repair, Mobile and extrachromosomal element functions, Other].	3.54716e-72
NZ_CP011314.1\|WP_000777554.1\|168308_168782_-\|trimethoprim-resistant-dihydrofolate-reductase-DfrA1	gnl\|CDD\|238127	cd00209, DHFR, Dihydrofolate reductase (DHFR). Reduces 7,8-dihydrofolate to 5,6,7,8-tetrahydrofolate with NADPH as a cofactor. This is an essential step in the biosynthesis of deoxythymidine phosphate since 5,6,7,8-tetrahydrofolate is required to regenerate 5,10-methylenetetrahydrofolate which is then utilized by thymidylate synthase. Inhibition of DHFR interrupts thymidilate synthesis and DNA replication, inhibitors of DHFR (such as Methotrexate) are used in cancer chemotherapy. 5,6,7,8-tetrahydrofolate also is involved in glycine, serine, and threonine metabolism and aminoacyl-tRNA biosynthesis.	3.39419e-57

>NZ_CP011314.1|WP_001353740.1|171433_171673_-|DUF1819-family-protein
MTPFRYNSDLTSGSLQTRECRIITGLLLQELDEAAWDKAMYKENVLQKRTQSTVRRISSALRKRLEHLSSDFWAFAFLC
>NZ_CP011314.1|WP_000497519.1|170919_171246_+|tyrosine-type-recombinase/integrase
MFVFPSSTLCNHPYNGKLCRHHLHDSVARKALKAAVQKAGIVSKRVTCHTFRHSFATHLLQAGRDIRTVQELLGHNDVKTTQIYTHVLGQHFAGTTSPADGLMLLINQ
>NZ_CP011314.1|WP_000071896.1|170268_170805_+|class-2-integron-integrase-IntI2
MSNSPFLNSIRTDMRQKGYALKTEKTYLHWIKRFILFHKKRHPQTMGSEEVRLFLSSLANSRHVAINTQKIALNALAFLYNRFLQQPLGDIDYIPASKPRRLPSVISANEVQRILQVMDTRNQVIFTLLYGAGLRINECLRLRVKDFDFDNGCITVHDGKGGKSRNSLLPTRLIPAIK
>NZ_CP011314.1|WP_004176137.1|169170_170202_+|IS630-like-element-ISEc33-family-transposase
MPIIAPIPRGERRLMQKAIHKTRDKNHARRLTAMLMLHRGERVSDVARTLCCARSSVGRWINWFTHSGIEGLKSLPAGRSRRWPFEHICTLLRELIKHSPGDFGYQRSRWSTELLAIKINEITGCQLHAATVRRWLPSAGLVWRRAAPTLRIRDPHKDEKMAVIHKALDECSAEHPVFYEDEVDIHLNPKIGADWQLRGQQKRVVTPGQNEKYYLAGALHSGTGKVSYVGGNSKSSALFIALLKHLKATYRRAKTITLIVDNYIIHKSRETQRWLKANPKFRVIYQPVYSPWVNHVERLWQALHDTITRNHQCRSMWQLLKKVRHFMETASPFPGGKHGQAKV
>NZ_CP011314.1|WP_000777554.1|168308_168782_-|trimethoprim-resistant-dihydrofolate-reductase-DfrA1
MKLSLMVAISKNGVIGNGPDIPWSAKGEQLLFKAITYNQWLLVGRKTFESMGALPNRKYAVVTRSSFTSDNENVLIFPSIKDALTNLKKITDHVIVSGGGEIYKSLIDQVDTLHISTIDIEPEGDVYFPEIPSNFRPVFTQDFASNINYSYQIWQKG
>NZ_CP011314.1|WP_000704156.1|167689_168214_-|streptothricin-N-acetyltransferase-Sat2
MKISVIPEQVAETLDAENHFIVREVFDVHLSDQGFELSTRSVSPYRKDYISDDDSDEDSACYGAFIDQELVGKIELNSTWNDLASIEHIVVSHTHRGKGVAHSLIEFAKKWALSRQLLGIRLETQTNNVPACNLYAKCGFTLGGIDLFTYKTRPQVSNETAMYWYWFSGAQDDA
>NZ_CP011314.1|WP_001444089.1|167123_167621_-|hypothetical-protein
MRDLLKVVLSLVLAMASGQALADLPIVLVDEARLPYDYSPSNYDISPSNYDNSISNYDNSPSNYDNSESNYDNSSSNYDNSRNGNRRLIYSANGSRTFAGYYVIANNGTTNFFSTSGKRMFYTPKGGRGVYGGKDGSFCGALVVINGQFSLALTDNGLKIMYLSN
>NZ_CP011314.1|WP_000119696.1|166691_167063_-|hypothetical-protein
MSYEPPRDGYTNGYIVDVMYDNRPSKYPAVFRTYVRIPDYVELDNAEELADAIIREVELKEAWLTRVLGNSADPDASVGKWDRRLAQCGGIDEMSSGVQATYFSPNGQLVGLVAYIDAEWMDE
>NZ_CP011314.1|WP_001271300.1|165904_166282_-|hypothetical-protein
MSAAKALAYALCDKLESKKVDEVVRNLVSSGWNIREVAWEASSFDHEMPYFDTGRDFDIGFPDTLSSKIEFLTANGSIVQARARLHFKQALIFAKASKHVAALKNSLDYYYGSSVIPPQNHGGYL
>NZ_CP011314.1|WP_000251879.1|164057_165674_+|transposase
MVRLATFNDNVQVVHIGHLFRNSGHKEWRIFVWFNPMQERKWTRFTHLPLLSRAKVVNSTTKQINKADRVIEFEASDLQRAKIIDFPNLSSFASVRNKDGAQSSFIYEAETPYSKTRYHIPQLELARSLFLINSYFCRSCLSSTALQQEFDVQYEVERDHLEIRILPSSSFPKGALEQSAVVQLLVWLFSDQDVMDSYESIFRHYQQNREIKNGVESWCFSFDPPPMQGWKLHVKGRSSNEDKDYLVEEIVGLEINAMLPSTTAISHASFQEKEAGDGSTQHIAVSTESVVDDEHLQLDDEETANIDTDTRVIEAEPTWISFSRPSRIEKSRRARKSSQTILEKEEATTSENSNLVSTDEPHLGGVLAAADVGGKQDATNYNSIFANRFAAFDELLSILKTKFACRVLFEETLVLPKVGRSRLHLCKDGSPRVIKAVGVQRNGSEFVLLEVDASDGVKMLSTKVLSGVDSETWRNDFEKIRRGVVKSSLNWPNSLFDQLYGQDGHRGVNHPKGLGELQVSREDMEGWAERVVREQFTH
>NZ_CP011314.1|WP_046654917.1|172291_172579_-|hypothetical-protein
MDQDDVLSKISSENTTAHELLSEAMPNAASRFYRTAKNLSRLLDEVREHFPDASYYAASGSLCLLLGESHNKHDQPQQELLAHAAPDLRVEGGDW
>NZ_CP011314.1|WP_162487916.1|172634_172796_-|hypothetical-protein
MKVTVKSMKALLASTGKKMKLTGSNKNGDRFYVVTGWSGEYTIRGIAWQLGLV
>NZ_CP011314.1|WP_004197207.1|172859_173132_-|hypothetical-protein
MKLTNAQIYTLRRLSGGSKYQLRGDGKKARECRPGSGIFTDDISAPSIPVLFRLGLVDYVHKGGREHALFYAVTLTDTGKQAAATMNIKD
>NZ_CP011314.1|WP_004197220.1|173215_173422_-|hypothetical-protein
MSNLLEKALMELSDGSREKMTDLTSITKRMTDLASIITKRMTPCPNCRVLLPPDATQHVCVMEVITFE
>NZ_CP011314.1|WP_046654918.1|173723_173918_-|hypothetical-protein
MRTIEELGKRAALLKWKRQFGPFEKCPVCYGILTGCKLCGGNGRVIQEDIDAWNNPISKMRRQI
>NZ_CP011314.1|WP_046654966.1|173920_174517_-|DUF551-domain-containing-protein
MKPDEVLALTGALLASMDTEPVGWTDEAELRDVEKDGCGYLFKANPISPHADPRRVIKLYRHAQPAQVVPDDVSIFEAAIEECKTCDSIDEHAWNHGVLAVIAKYESCRAAMLAAAPQSPGSDPAPVPGSWMPVSERMPPPRYEVLVGRWWGEKPRWCCKWATYIPGHPDSQSSGWLIPGASWTPTHWMPLPVAPQEV
>NZ_CP011314.1|WP_016947068.1|174600_175083_-|hypothetical-protein
MNNSFECSKRTDITEQPQSHDLLIANGNETANLLRHLANNEIDSDYFAVVSECESYGQETDAELSITEFALRAAGYVDALVESLEKALQRIAELDKDCRVYENNVKNLLERAGSAESSCAEAARILQSGERMALTRAITILQGPGISHCDGGIKPDEVNL
>NZ_CP011314.1|WP_158423360.1|175420_175756_-|hypothetical-protein
MSNVSVPKIPLSNLECVHCGRIYHDADVCSSDDCPGNDIAMPELLNHWTVDEVAECLDGVGQELYRKLWSYIEATTDGEVPLAKVAWGDLTREQKVELVHAIQQEFPDDDI
>NZ_CP011314.1|WP_004141386.1|176283_176496_-|hypothetical-protein
MAITEGFCADLYCDCDGCQSGKIYPQGQADFIGRNMTDISQQARKAGWRISKDRQRCYAPGHKISRGANQ
>NZ_CP011314.1|WP_032719523.1|176902_177418_-|DUF262-domain-containing-protein
MKNRIREAEIFRARTGEYPIDMYIQWIKSGALNFGAEYQRDYVWGHQEQQTFLLVLISGFPIGSVALAKAPDWDICDGPYIEVVDGKQRLTTLKLFINNEIPIVIGGEEIYWSEFSRSEQLAFGRPTLSAVILDDATEKDRIAYFVAVNFTGVPQSEEHRQKVLKLQERAA

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP011314_1	1.1\|142518\|34\|NZ_CP011314\|CRISPRCasFinder	142518-142551	34	CP052310	Klebsiella pneumoniae strain E16KP0102 plasmid pE16KP0102-1, complete sequence	32497-32530	0	1.0
NZ_CP011314_1	1.1\|142518\|34\|NZ_CP011314\|CRISPRCasFinder	142518-142551	34	NZ_CP018720	Klebsiella pneumoniae strain KP_Goe_828304 plasmid pKp_Goe_304-1, complete sequence	24631-24664	0	1.0
NZ_CP011314_1	1.1\|142518\|34\|NZ_CP011314\|CRISPRCasFinder	142518-142551	34	NZ_CP018702	Klebsiella pneumoniae strain Kp_Goe_827024 plasmid pKp_Goe_024-1, complete sequence	5074-5107	0	1.0
NZ_CP011314_1	1.1\|142518\|34\|NZ_CP011314\|CRISPRCasFinder	142518-142551	34	CP052325	Klebsiella pneumoniae strain E16KP0032 plasmid pE16KP0032-1, complete sequence	30142-30175	0	1.0
NZ_CP011314_1	1.1\|142518\|34\|NZ_CP011314\|CRISPRCasFinder	142518-142551	34	NZ_CP015501	Klebsiella pneumoniae strain SKGH01 plasmid unnamed 1, complete sequence	7738-7771	0	1.0
NZ_CP011314_1	1.1\|142518\|34\|NZ_CP011314\|CRISPRCasFinder	142518-142551	34	CP052558	Klebsiella pneumoniae strain A17KP0008 plasmid pA17KP0008-1, complete sequence	25478-25511	0	1.0
NZ_CP011314_1	1.1\|142518\|34\|NZ_CP011314\|CRISPRCasFinder	142518-142551	34	CP052269	Klebsiella pneumoniae strain E16KP0268 plasmid pE16K0268-1, complete sequence	33563-33596	0	1.0
NZ_CP011314_1	1.1\|142518\|34\|NZ_CP011314\|CRISPRCasFinder	142518-142551	34	CP052233	Klebsiella pneumoniae strain E17KP0033 plasmid pE17KP0033-2, complete sequence	30385-30418	0	1.0
NZ_CP011314_1	1.1\|142518\|34\|NZ_CP011314\|CRISPRCasFinder	142518-142551	34	CP052208	Klebsiella pneumoniae strain E17KP0085 plasmid pE17KP0085-1, complete sequence	32497-32530	0	1.0
NZ_CP011314_1	1.1\|142518\|34\|NZ_CP011314\|CRISPRCasFinder	142518-142551	34	NZ_CP026172	Klebsiella pneumoniae strain KPNIH50 plasmid pKPN-bbef, complete sequence	227539-227572	0	1.0
NZ_CP011314_1	1.1\|142518\|34\|NZ_CP011314\|CRISPRCasFinder	142518-142551	34	NZ_CP026186	Klebsiella pneumoniae strain KPNIH49 plasmid pKPN-3967, complete sequence	221242-221275	0	1.0
NZ_CP011314_1	1.1\|142518\|34\|NZ_CP011314\|CRISPRCasFinder	142518-142551	34	NZ_CP031580	Klebsiella pneumoniae strain N4b plasmid p1502320-3	7802-7835	0	1.0
NZ_CP011314_1	1.1\|142518\|34\|NZ_CP011314\|CRISPRCasFinder	142518-142551	34	CP052327	Klebsiella pneumoniae strain E16KP0017 plasmid pE16K0017-1, complete sequence	30135-30168	0	1.0
NZ_CP011314_1	1.1\|142518\|34\|NZ_CP011314\|CRISPRCasFinder	142518-142551	34	NZ_CP034681	Klebsiella quasipneumoniae strain D120-1 plasmid pD120-1_296kb, complete sequence	28441-28474	0	1.0
NZ_CP011314_1	1.1\|142518\|34\|NZ_CP011314\|CRISPRCasFinder	142518-142551	34	CP052539	Klebsiella pneumoniae strain B16KP0141 plasmid pB16KP0141-2, complete sequence	30138-30171	0	1.0
NZ_CP011314_1	1.1\|142518\|34\|NZ_CP011314\|CRISPRCasFinder	142518-142551	34	NZ_CP023723	Klebsiella pneumoniae strain TVGHCRE225 plasmid unnamed1, complete sequence	11076-11109	0	1.0
NZ_CP011314_1	1.1\|142518\|34\|NZ_CP011314\|CRISPRCasFinder	142518-142551	34	NZ_CP041935	Klebsiella pneumoniae strain KP14003 plasmid unnamed1, complete sequence	30080-30113	0	1.0
NZ_CP011314_1	1.1\|142518\|34\|NZ_CP011314\|CRISPRCasFinder	142518-142551	34	CP052236	Klebsiella pneumoniae strain E17KP0029 plasmid pE17KP0029-1, complete sequence	168222-168255	0	1.0
NZ_CP011314_1	1.1\|142518\|34\|NZ_CP011314\|CRISPRCasFinder	142518-142551	34	NZ_CP043933	Klebsiella pneumoniae strain 555 plasmid pSCKLB555-1, complete sequence	60573-60606	0	1.0
NZ_CP011314_1	1.1\|142518\|34\|NZ_CP011314\|CRISPRCasFinder	142518-142551	34	CP052240	Klebsiella pneumoniae strain E17KP0027 plasmid pE17KP0027-1, complete sequence	30135-30168	0	1.0
NZ_CP011314_1	1.1\|142518\|34\|NZ_CP011314\|CRISPRCasFinder	142518-142551	34	CP052242	Klebsiella pneumoniae strain E17KP0019 plasmid pE17KP0019-1, complete sequence	32497-32530	0	1.0
NZ_CP011314_1	1.1\|142518\|34\|NZ_CP011314\|CRISPRCasFinder	142518-142551	34	NZ_CP018696	Klebsiella pneumoniae strain Kp_Goe_149832 plasmid pKp_Goe_832-1, complete sequence	102211-102244	0	1.0
NZ_CP011314_1	1.1\|142518\|34\|NZ_CP011314\|CRISPRCasFinder	142518-142551	34	NZ_CP018708	Klebsiella pneumoniae strain Kp_Goe_827026 plasmid pKp_Goe_026-1, complete sequence	54729-54762	0	1.0
NZ_CP011314_1	1.1\|142518\|34\|NZ_CP011314\|CRISPRCasFinder	142518-142551	34	NZ_MK262712	Klebsiella pneumoniae strain KP18-29 plasmid p18-29-MDR, complete sequence	48692-48725	0	1.0
NZ_CP011314_1	1.1\|142518\|34\|NZ_CP011314\|CRISPRCasFinder	142518-142551	34	NZ_CP014776	Pluralibacter gergoviae strain FB2 plasmid pFB2.1, complete sequence	57166-57199	0	1.0
NZ_CP011314_1	1.1\|142518\|34\|NZ_CP011314\|CRISPRCasFinder	142518-142551	34	NZ_MG845200	Klebsiella oxytoca strain TJ11 plasmid pNDM-TJ11, complete sequence	130367-130400	0	1.0
NZ_CP011314_1	1.1\|142518\|34\|NZ_CP011314\|CRISPRCasFinder	142518-142551	34	NZ_MG288682	Klebsiella aerogenes strain E20 plasmid pE20-HI3, complete sequence	28417-28450	0	1.0
NZ_CP011314_1	1.1\|142518\|34\|NZ_CP011314\|CRISPRCasFinder	142518-142551	34	NZ_MG845201	Klebsiella pneumoniae strain TJ03 plasmid pNDM-TJ03, complete sequence	130451-130484	0	1.0
NZ_CP011314_1	1.1\|142518\|34\|NZ_CP011314\|CRISPRCasFinder	142518-142551	34	NZ_CP050068	Klebsiella aerogenes strain 035 plasmid p35, complete sequence	306091-306124	0	1.0
NZ_CP011314_1	1.1\|142518\|34\|NZ_CP011314\|CRISPRCasFinder	142518-142551	34	NZ_CP017986	Klebsiella pneumoniae strain 825795-1 plasmid unnamed1, complete sequence	149479-149512	0	1.0
NZ_CP011314_1	1.1\|142518\|34\|NZ_CP011314\|CRISPRCasFinder	142518-142551	34	NZ_CP018714	Klebsiella pneumoniae strain Kp_Goe_152021 plasmid pKp_Goe_021-1, complete sequence	8642-8675	0	1.0
NZ_CP011314_1	1.1\|142518\|34\|NZ_CP011314\|CRISPRCasFinder	142518-142551	34	NZ_LN824134	Klebsiella pneumoniae genome assembly MS6671.v1, plasmid : _Plasmid_A_Kpneumoniae_MS6671	17595-17628	0	1.0
NZ_CP011314_1	1.1\|142518\|34\|NZ_CP011314\|CRISPRCasFinder	142518-142551	34	NZ_CP031818	Klebsiella pneumoniae strain INF235-sc-2280127 plasmid unnamed1, complete sequence	223922-223955	0	1.0
NZ_CP011314_1	1.1\|142518\|34\|NZ_CP011314\|CRISPRCasFinder	142518-142551	34	NZ_CP042866	Escherichia coli strain ATCC BAA-196 plasmid unnamed1, complete sequence	139000-139033	0	1.0
NZ_CP011314_1	1.1\|142518\|34\|NZ_CP011314\|CRISPRCasFinder	142518-142551	34	NZ_CP026398	Klebsiella pneumoniae strain KPNIH48 plasmid pKPN-edaa, complete sequence	8236-8269	0	1.0
NZ_CP011314_1	1.1\|142518\|34\|NZ_CP011314\|CRISPRCasFinder	142518-142551	34	NZ_CP018961	Escherichia coli strain Ecol_422 plasmid pEC422_1, complete sequence	277823-277856	0	1.0
NZ_CP011314_1	1.1\|142518\|34\|NZ_CP011314\|CRISPRCasFinder	142518-142551	34	NZ_CP011314	Klebsiella pneumoniae subsp. pneumoniae strain 234-12 plasmid pKpn23412-362, complete sequence	142518-142551	0	1.0
NZ_CP011314_1	1.1\|142518\|34\|NZ_CP011314\|CRISPRCasFinder	142518-142551	34	NZ_CP018313	Klebsiella pneumoniae strain Kp_Goe_822579 plasmid pKp_Goe_579-1, complete sequence	95728-95761	0	1.0
NZ_CP011314_1	1.1\|142518\|34\|NZ_CP011314\|CRISPRCasFinder	142518-142551	34	NZ_CP027156	Klebsiella pneumoniae strain AR_0363 plasmid unnamed4	128199-128232	0	1.0
NZ_CP011314_1	1.1\|142518\|34\|NZ_CP011314\|CRISPRCasFinder	142518-142551	34	NZ_CP044381	Klebsiella pneumoniae strain 2018S07-013 plasmid p2018S07-013-1, complete sequence	243788-243821	0	1.0
NZ_CP011314_1	1.1\|142518\|34\|NZ_CP011314\|CRISPRCasFinder	142518-142551	34	NZ_CP018687	Klebsiella pneumoniae strain Kp_Goe_149473 plasmid pKp_Goe_473-1, complete sequence	117621-117654	0	1.0
NZ_CP011314_1	1.1\|142518\|34\|NZ_CP011314\|CRISPRCasFinder	142518-142551	34	NZ_CP018339	Klebsiella pneumoniae isolate Kp_Goe_154414 plasmid pKp_Goe_414-1, complete sequence	75943-75976	0	1.0
NZ_CP011314_1	1.1\|142518\|34\|NZ_CP011314\|CRISPRCasFinder	142518-142551	34	NZ_MK413722	Klebsiella pneumoniae strain 332306 plasmid p332306-HI3, complete sequence	279388-279421	0	1.0
NZ_CP011314_1	1.1\|142518\|34\|NZ_CP011314\|CRISPRCasFinder	142518-142551	34	HG918041	Klebsiella pneumoniae Kp15 plasmid pENVA complete sequence	100529-100562	0	1.0
NZ_CP011314_1	1.1\|142518\|34\|NZ_CP011314\|CRISPRCasFinder	142518-142551	34	NZ_MF150122	Klebsiella pneumoniae strain A64477 plasmid pKP64477b, complete sequence	85322-85355	0	1.0
NZ_CP011314_1	1.1\|142518\|34\|NZ_CP011314\|CRISPRCasFinder	142518-142551	34	NZ_CP032223	Klebsiella pneumoniae strain AR_0046 plasmid unnamed1, complete sequence	30109-30142	0	1.0
NZ_CP011314_2	2.1\|172059\|33\|NZ_CP011314\|PILER-CR	172059-172091	33	NZ_KX774387	Providencia rettgeri strain 30905 plasmid pC131, complete sequence	10387-10419	0	1.0
NZ_CP011314_2	2.1\|172059\|33\|NZ_CP011314\|PILER-CR	172059-172091	33	NZ_CP053895	Proteus mirabilis strain JPM24 plasmid pJPM24, complete sequence	72648-72680	0	1.0
NZ_CP011314_2	2.1\|172059\|33\|NZ_CP011314\|PILER-CR	172059-172091	33	NZ_KU963389	Escherichia coli strain ECO37 plasmid ECO37P1, complete sequence	15133-15165	0	1.0
NZ_CP011314_2	2.1\|172059\|33\|NZ_CP011314\|PILER-CR	172059-172091	33	NZ_CP047288	Proteus cibarius strain G11 plasmid p152, complete sequence	62060-62092	0	1.0
NZ_CP011314_2	2.1\|172059\|33\|NZ_CP011314\|PILER-CR	172059-172091	33	NZ_CP044485	Acinetobacter schindleri strain HZE30-1 plasmid pHZE30-1-2, complete sequence	28402-28434	0	1.0
NZ_CP011314_2	2.1\|172059\|33\|NZ_CP011314\|PILER-CR	172059-172091	33	NZ_CP025853	Escherichia coli strain 510016 plasmid p510016_36, complete sequence	25816-25848	0	1.0
NZ_CP011314_2	2.1\|172059\|33\|NZ_CP011314\|PILER-CR	172059-172091	33	NZ_KT754165	Shigella dysenteriae 1 strain 93-531-1 plasmid p93-531-1, complete sequence	23240-23272	0	1.0
NZ_CP011314_2	2.1\|172059\|33\|NZ_CP011314\|PILER-CR	172059-172091	33	NZ_CP053372	Proteus cibarius strain G32 plasmid pG32-177, complete sequence	57315-57347	0	1.0
NZ_CP011314_2	2.1\|172059\|33\|NZ_CP011314\|PILER-CR	172059-172091	33	NZ_CP024247	Escherichia coli O27:H7 strain B4103-1 plasmid unnamed2	64739-64771	0	1.0
NZ_CP011314_2	2.1\|172059\|33\|NZ_CP011314\|PILER-CR	172059-172091	33	NZ_CP053043	Proteus cibarius strain HNCF44W plasmid pHNCF44W_NDM-1, complete sequence	95158-95190	0	1.0
NZ_CP011314_2	2.1\|172059\|33\|NZ_CP011314\|PILER-CR	172059-172091	33	JX469830	Uncultured bacterium plasmid pG527, complete sequence	41349-41381	0	1.0
NZ_CP011314_2	2.1\|172059\|33\|NZ_CP011314\|PILER-CR	172059-172091	33	NZ_CP013819	Piscirickettsia salmonis strain AY3800B plasmid p3PS10, complete sequence	10767-10799	0	1.0
NZ_CP011314_2	2.1\|172059\|33\|NZ_CP011314\|PILER-CR	172059-172091	33	CP025925	Escherichia coli strain 520873 plasmid p520873_36, complete sequence	13633-13665	0	1.0
NZ_CP011314_2	2.1\|172059\|33\|NZ_CP011314\|PILER-CR	172059-172091	33	CP025875	Escherichia coli strain 503458 plasmid p503458_37, complete sequence	10830-10862	0	1.0
NZ_CP011314_2	2.1\|172059\|33\|NZ_CP011314\|PILER-CR	172059-172091	33	NZ_CP013795	Piscirickettsia salmonis strain AY6297B plasmid p4PS8, complete sequence	10767-10799	0	1.0
NZ_CP011314_2	2.1\|172059\|33\|NZ_CP011314\|PILER-CR	172059-172091	33	NZ_CP023380	Escherichia coli strain 127 plasmid p43, complete sequence	15396-15428	0	1.0
NZ_CP011314_2	2.1\|172059\|33\|NZ_CP011314\|PILER-CR	172059-172091	33	NZ_CP011314	Klebsiella pneumoniae subsp. pneumoniae strain 234-12 plasmid pKpn23412-362, complete sequence	172056-172088	0	1.0
NZ_CP011314_2	2.1\|172059\|33\|NZ_CP011314\|PILER-CR	172059-172091	33	NC_008357	Pseudomonas aeruginosa plasmid pBS228, complete sequence	68063-68095	0	1.0
NZ_CP011314_2	2.1\|172059\|33\|NZ_CP011314\|PILER-CR	172059-172091	33	NZ_CP027138	Escherichia coli strain AR_0369 plasmid unnamed2	74789-74821	0	1.0
NZ_CP011314_2	2.1\|172059\|33\|NZ_CP011314\|PILER-CR	172059-172091	33	NZ_CP022673	Shigella sonnei strain 866 plasmid p866, complete sequence	78315-78347	0	1.0
NZ_CP011314_2	2.1\|172059\|33\|NZ_CP011314\|PILER-CR	172059-172091	33	NZ_CP045128	Acinetobacter indicus strain XG03 plasmid pXG03-X3, complete sequence	89271-89303	0	1.0
NZ_CP011314_2	2.1\|172059\|33\|NZ_CP011314\|PILER-CR	172059-172091	33	NZ_LT985250	Escherichia coli strain 170 plasmid RCS38_p, complete sequence	152291-152323	0	1.0
NZ_CP011314_2	2.1\|172059\|33\|NZ_CP011314\|PILER-CR	172059-172091	33	NZ_MK360096	Salmonella enterica strain 13-SA02717 plasmid pSE13-SA02717, complete sequence	17850-17882	0	1.0
NZ_CP011314_2	2.1\|172059\|33\|NZ_CP011314\|PILER-CR	172059-172091	33	NZ_CP053897	Providencia rettgeri strain YPR31 plasmid pYPR31, complete sequence	75880-75912	0	1.0
NZ_CP011314_2	2.1\|172059\|33\|NZ_CP011314\|PILER-CR	172059-172091	33	NZ_MF150120	Klebsiella pneumoniae strain A64477 plasmid pKP64477d, complete sequence	40084-40116	0	1.0
NZ_CP011314_2	2.1\|172059\|33\|NZ_CP011314\|PILER-CR	172059-172091	33	NZ_KX756453	Klebsiella pneumoniae strain 1194/11 plasmid pKP1194a, complete sequence	42453-42485	0	1.0
NZ_CP011314_2	2.1\|172059\|33\|NZ_CP011314\|PILER-CR	172059-172091	33	NC_015472	Escherichia coli plasmid pECTm80, complete sequence	13464-13496	0	1.0
NZ_CP011314_2	2.1\|172059\|33\|NZ_CP011314\|PILER-CR	172059-172091	33	NZ_CP013800	Piscirickettsia salmonis strain AY6532B plasmid p4PS9, complete sequence	12090-12122	0	1.0
NZ_CP011314_2	2.1\|172059\|33\|NZ_CP011314\|PILER-CR	172059-172091	33	MG516911	Proteus mirabilis plasmid pPm60, complete sequence	57128-57160	0	1.0
NZ_CP011314_2	2.1\|172059\|33\|NZ_CP011314\|PILER-CR	172059-172091	33	NZ_CP003997	Klebsiella pneumoniae subsp. pneumoniae Kp13 plasmid pKP13d, complete sequence	42619-42651	0	1.0
NZ_CP011314_2	2.1\|172059\|33\|NZ_CP011314\|PILER-CR	172059-172091	33	CP054380	Escherichia coli strain SCU-175 plasmid pSCU-175-1, complete sequence	38153-38185	0	1.0
NZ_CP011314_2	2.1\|172059\|33\|NZ_CP011314\|PILER-CR	172059-172091	33	NC_002525	Escherichia coli K-12 plasmid R721, complete sequence	10525-10557	0	1.0
NZ_CP011314_2	2.1\|172059\|33\|NZ_CP011314\|PILER-CR	172059-172091	33	NZ_CP048015	Acinetobacter towneri strain 205 plasmid pAT205, complete sequence	49215-49247	0	1.0
NZ_CP011314_2	2.1\|172059\|33\|NZ_CP011314\|PILER-CR	172059-172091	33	NZ_CP034054	Klebsiella pneumoniae strain KP_NORM_BLD_2015_112126 plasmid unnamed1, complete sequence	140941-140973	0	1.0
NZ_CP011314_2	2.1\|172059\|33\|NZ_CP011314\|PILER-CR	172059-172091	33	NZ_CP047114	Proteus mirabilis strain SCBX1.1 plasmid plas1.1.2, complete sequence	46467-46499	0	1.0
NZ_CP011314_2	2.1\|172059\|33\|NZ_CP011314\|PILER-CR	172059-172091	33	NZ_CP034046	Klebsiella pneumoniae strain KP_NORM_BLD_2014_104014 plasmid unnamed1, complete sequence	150963-150995	0	1.0
NZ_CP011314_2	2.1\|172059\|33\|NZ_CP011314\|PILER-CR	172059-172091	33	NZ_CP027700	Klebsiella pneumoniae strain KP30835 plasmid unnamed5, complete sequence	7471-7503	0	1.0
NZ_CP011314_2	2.1\|172059\|33\|NZ_CP011314\|PILER-CR	172059-172091	33	NZ_CP053899	Proteus mirabilis strain YPM35 plasmid pJPM35-1, complete sequence	116699-116731	0	1.0
NZ_CP011314_2	2.1\|172059\|33\|NZ_CP011314\|PILER-CR	172059-172091	33	NZ_MK264770	Klebsiella pneumoniae strain KP89 plasmid pKP89, complete sequence	42620-42652	0	1.0
NZ_CP011314_2	2.2\|172115\|41\|NZ_CP011314\|PILER-CR	172115-172155	41	NZ_KX774387	Providencia rettgeri strain 30905 plasmid pC131, complete sequence	10443-10483	0	1.0
NZ_CP011314_2	2.2\|172115\|41\|NZ_CP011314\|PILER-CR	172115-172155	41	NZ_MF150120	Klebsiella pneumoniae strain A64477 plasmid pKP64477d, complete sequence	40020-40060	0	1.0
NZ_CP011314_2	2.2\|172115\|41\|NZ_CP011314\|PILER-CR	172115-172155	41	NZ_CP053895	Proteus mirabilis strain JPM24 plasmid pJPM24, complete sequence	72704-72744	0	1.0
NZ_CP011314_2	2.2\|172115\|41\|NZ_CP011314\|PILER-CR	172115-172155	41	NZ_KX756453	Klebsiella pneumoniae strain 1194/11 plasmid pKP1194a, complete sequence	42389-42429	0	1.0
NZ_CP011314_2	2.2\|172115\|41\|NZ_CP011314\|PILER-CR	172115-172155	41	NZ_KU963389	Escherichia coli strain ECO37 plasmid ECO37P1, complete sequence	15189-15229	0	1.0
NZ_CP011314_2	2.2\|172115\|41\|NZ_CP011314\|PILER-CR	172115-172155	41	NZ_CP047288	Proteus cibarius strain G11 plasmid p152, complete sequence	62116-62156	0	1.0
NZ_CP011314_2	2.2\|172115\|41\|NZ_CP011314\|PILER-CR	172115-172155	41	NC_015472	Escherichia coli plasmid pECTm80, complete sequence	13400-13440	0	1.0
NZ_CP011314_2	2.2\|172115\|41\|NZ_CP011314\|PILER-CR	172115-172155	41	NZ_CP044485	Acinetobacter schindleri strain HZE30-1 plasmid pHZE30-1-2, complete sequence	28458-28498	0	1.0
NZ_CP011314_2	2.2\|172115\|41\|NZ_CP011314\|PILER-CR	172115-172155	41	NZ_CP025853	Escherichia coli strain 510016 plasmid p510016_36, complete sequence	25872-25912	0	1.0
NZ_CP011314_2	2.2\|172115\|41\|NZ_CP011314\|PILER-CR	172115-172155	41	NZ_KT754165	Shigella dysenteriae 1 strain 93-531-1 plasmid p93-531-1, complete sequence	23296-23336	0	1.0
NZ_CP011314_2	2.2\|172115\|41\|NZ_CP011314\|PILER-CR	172115-172155	41	NZ_CP013800	Piscirickettsia salmonis strain AY6532B plasmid p4PS9, complete sequence	12026-12066	0	1.0
NZ_CP011314_2	2.2\|172115\|41\|NZ_CP011314\|PILER-CR	172115-172155	41	NZ_CP053372	Proteus cibarius strain G32 plasmid pG32-177, complete sequence	57371-57411	0	1.0
NZ_CP011314_2	2.2\|172115\|41\|NZ_CP011314\|PILER-CR	172115-172155	41	NZ_CP024247	Escherichia coli O27:H7 strain B4103-1 plasmid unnamed2	64795-64835	0	1.0
NZ_CP011314_2	2.2\|172115\|41\|NZ_CP011314\|PILER-CR	172115-172155	41	NZ_CP053043	Proteus cibarius strain HNCF44W plasmid pHNCF44W_NDM-1, complete sequence	95214-95254	0	1.0
NZ_CP011314_2	2.2\|172115\|41\|NZ_CP011314\|PILER-CR	172115-172155	41	MG516911	Proteus mirabilis plasmid pPm60, complete sequence	57064-57104	0	1.0
NZ_CP011314_2	2.2\|172115\|41\|NZ_CP011314\|PILER-CR	172115-172155	41	JX469830	Uncultured bacterium plasmid pG527, complete sequence	41405-41445	0	1.0
NZ_CP011314_2	2.2\|172115\|41\|NZ_CP011314\|PILER-CR	172115-172155	41	NZ_CP013819	Piscirickettsia salmonis strain AY3800B plasmid p3PS10, complete sequence	10823-10863	0	1.0
NZ_CP011314_2	2.2\|172115\|41\|NZ_CP011314\|PILER-CR	172115-172155	41	NZ_CP003997	Klebsiella pneumoniae subsp. pneumoniae Kp13 plasmid pKP13d, complete sequence	42555-42595	0	1.0
NZ_CP011314_2	2.2\|172115\|41\|NZ_CP011314\|PILER-CR	172115-172155	41	CP025925	Escherichia coli strain 520873 plasmid p520873_36, complete sequence	13689-13729	0	1.0
NZ_CP011314_2	2.2\|172115\|41\|NZ_CP011314\|PILER-CR	172115-172155	41	CP025875	Escherichia coli strain 503458 plasmid p503458_37, complete sequence	10886-10926	0	1.0
NZ_CP011314_2	2.2\|172115\|41\|NZ_CP011314\|PILER-CR	172115-172155	41	NZ_CP013795	Piscirickettsia salmonis strain AY6297B plasmid p4PS8, complete sequence	10823-10863	0	1.0
NZ_CP011314_2	2.2\|172115\|41\|NZ_CP011314\|PILER-CR	172115-172155	41	CP054380	Escherichia coli strain SCU-175 plasmid pSCU-175-1, complete sequence	38089-38129	0	1.0
NZ_CP011314_2	2.2\|172115\|41\|NZ_CP011314\|PILER-CR	172115-172155	41	NC_002525	Escherichia coli K-12 plasmid R721, complete sequence	10461-10501	0	1.0
NZ_CP011314_2	2.2\|172115\|41\|NZ_CP011314\|PILER-CR	172115-172155	41	NZ_CP023380	Escherichia coli strain 127 plasmid p43, complete sequence	15452-15492	0	1.0
NZ_CP011314_2	2.2\|172115\|41\|NZ_CP011314\|PILER-CR	172115-172155	41	NZ_CP011314	Klebsiella pneumoniae subsp. pneumoniae strain 234-12 plasmid pKpn23412-362, complete sequence	172112-172152	0	1.0
NZ_CP011314_2	2.2\|172115\|41\|NZ_CP011314\|PILER-CR	172115-172155	41	NC_008357	Pseudomonas aeruginosa plasmid pBS228, complete sequence	68119-68159	0	1.0
NZ_CP011314_2	2.2\|172115\|41\|NZ_CP011314\|PILER-CR	172115-172155	41	NZ_CP027138	Escherichia coli strain AR_0369 plasmid unnamed2	74845-74885	0	1.0
NZ_CP011314_2	2.2\|172115\|41\|NZ_CP011314\|PILER-CR	172115-172155	41	NZ_CP022673	Shigella sonnei strain 866 plasmid p866, complete sequence	78371-78411	0	1.0
NZ_CP011314_2	2.2\|172115\|41\|NZ_CP011314\|PILER-CR	172115-172155	41	NZ_CP048015	Acinetobacter towneri strain 205 plasmid pAT205, complete sequence	49151-49191	0	1.0
NZ_CP011314_2	2.2\|172115\|41\|NZ_CP011314\|PILER-CR	172115-172155	41	NZ_CP034054	Klebsiella pneumoniae strain KP_NORM_BLD_2015_112126 plasmid unnamed1, complete sequence	140877-140917	0	1.0
NZ_CP011314_2	2.2\|172115\|41\|NZ_CP011314\|PILER-CR	172115-172155	41	NZ_CP047114	Proteus mirabilis strain SCBX1.1 plasmid plas1.1.2, complete sequence	46403-46443	0	1.0
NZ_CP011314_2	2.2\|172115\|41\|NZ_CP011314\|PILER-CR	172115-172155	41	NZ_CP034046	Klebsiella pneumoniae strain KP_NORM_BLD_2014_104014 plasmid unnamed1, complete sequence	150899-150939	0	1.0
NZ_CP011314_2	2.2\|172115\|41\|NZ_CP011314\|PILER-CR	172115-172155	41	NZ_CP045128	Acinetobacter indicus strain XG03 plasmid pXG03-X3, complete sequence	89327-89367	0	1.0
NZ_CP011314_2	2.2\|172115\|41\|NZ_CP011314\|PILER-CR	172115-172155	41	NZ_CP027700	Klebsiella pneumoniae strain KP30835 plasmid unnamed5, complete sequence	7407-7447	0	1.0
NZ_CP011314_2	2.2\|172115\|41\|NZ_CP011314\|PILER-CR	172115-172155	41	NZ_LT985250	Escherichia coli strain 170 plasmid RCS38_p, complete sequence	152347-152387	0	1.0
NZ_CP011314_2	2.2\|172115\|41\|NZ_CP011314\|PILER-CR	172115-172155	41	NZ_MK360096	Salmonella enterica strain 13-SA02717 plasmid pSE13-SA02717, complete sequence	17906-17946	0	1.0
NZ_CP011314_2	2.2\|172115\|41\|NZ_CP011314\|PILER-CR	172115-172155	41	NZ_CP053899	Proteus mirabilis strain YPM35 plasmid pJPM35-1, complete sequence	116635-116675	0	1.0
NZ_CP011314_2	2.2\|172115\|41\|NZ_CP011314\|PILER-CR	172115-172155	41	NZ_MK264770	Klebsiella pneumoniae strain KP89 plasmid pKP89, complete sequence	42556-42596	0	1.0
NZ_CP011314_1	1.1\|142518\|34\|NZ_CP011314\|CRISPRCasFinder	142518-142551	34	NZ_CP034681	Klebsiella quasipneumoniae strain D120-1 plasmid pD120-1_296kb, complete sequence	28380-28413	1	0.971
NZ_CP011314_1	1.1\|142518\|34\|NZ_CP011314\|CRISPRCasFinder	142518-142551	34	NZ_CP023723	Klebsiella pneumoniae strain TVGHCRE225 plasmid unnamed1, complete sequence	11015-11048	1	0.971
NZ_CP011314_1	1.1\|142518\|34\|NZ_CP011314\|CRISPRCasFinder	142518-142551	34	NZ_CP014776	Pluralibacter gergoviae strain FB2 plasmid pFB2.1, complete sequence	57105-57138	1	0.971
NZ_CP011314_1	1.1\|142518\|34\|NZ_CP011314\|CRISPRCasFinder	142518-142551	34	NZ_MG288682	Klebsiella aerogenes strain E20 plasmid pE20-HI3, complete sequence	28356-28389	1	0.971
NZ_CP011314_1	1.1\|142518\|34\|NZ_CP011314\|CRISPRCasFinder	142518-142551	34	NZ_MK413722	Klebsiella pneumoniae strain 332306 plasmid p332306-HI3, complete sequence	279449-279482	1	0.971
NZ_CP011314_1	1.1\|142518\|34\|NZ_CP011314\|CRISPRCasFinder	142518-142551	34	NZ_CP020848	Klebsiella variicola strain KPN1481 plasmid pKPN1481-1, complete sequence	325868-325901	1	0.971
NZ_CP011314_1	1.1\|142518\|34\|NZ_CP011314\|CRISPRCasFinder	142518-142551	34	NZ_CP036336	Klebsiella pneumoniae strain BP327 plasmid pIncHIB, complete sequence	158946-158979	1	0.971
NZ_CP011314_1	1.1\|142518\|34\|NZ_CP011314\|CRISPRCasFinder	142518-142551	34	NZ_CP041093	Klebsiella pneumoniae subsp. pneumoniae strain KPCTRSRTH01 plasmid unnamed1, complete sequence	31450-31483	1	0.971
NZ_CP011314_1	1.1\|142518\|34\|NZ_CP011314\|CRISPRCasFinder	142518-142551	34	NZ_CP028791	Klebsiella pneumoniae strain WCHKP020030 plasmid pOXA1_020030, complete sequence	30644-30677	1	0.971
NZ_CP011314_1	1.1\|142518\|34\|NZ_CP011314\|CRISPRCasFinder	142518-142551	34	NZ_CP039526	Klebsiella pneumoniae subsp. pneumoniae strain HB25-1 plasmid pHB25-1-vir, complete sequence	28113-28146	1	0.971
NZ_CP011314_1	1.1\|142518\|34\|NZ_CP011314\|CRISPRCasFinder	142518-142551	34	CP050156	Klebsiella pneumoniae plasmid Carbapenemase(NDM-1)_IncH1B, complete sequence	115769-115802	1	0.971
NZ_CP011314_1	1.1\|142518\|34\|NZ_CP011314\|CRISPRCasFinder	142518-142551	34	NZ_MK413723	Klebsiella pneumoniae strain 130721005 plasmid p721005-HI3, complete sequence	132619-132652	1	0.971
NZ_CP011314_1	1.1\|142518\|34\|NZ_CP011314\|CRISPRCasFinder	142518-142551	34	NZ_MK413721	Klebsiella pneumoniae strain 130504051 plasmid p504051-HI3, complete sequence	132254-132287	1	0.971
NZ_CP011314_1	1.1\|142518\|34\|NZ_CP011314\|CRISPRCasFinder	142518-142551	34	NZ_MK191024	Klebsiella pneumoniae strain KP17-16 plasmid p17-16-vir, complete sequence	29401-29434	1	0.971
NZ_CP011314_1	1.1\|142518\|34\|NZ_CP011314\|CRISPRCasFinder	142518-142551	34	NZ_CP008933	Klebsiella pneumoniae strain PMK1 plasmid pPMK1-NDM, complete sequence	11037-11070	1	0.971
NZ_CP011314_1	1.1\|142518\|34\|NZ_CP011314\|CRISPRCasFinder	142518-142551	34	NC_016980	Klebsiella pneumoniae plasmid pNDM-MAR, complete sequence	240119-240152	1	0.971
NZ_CP011314_1	1.1\|142518\|34\|NZ_CP011314\|CRISPRCasFinder	142518-142551	34	NZ_CP025462	Klebsiella pneumoniae strain F44 plasmid p44-1, complete sequence	42953-42986	1	0.971
NZ_CP011314_1	1.1\|142518\|34\|NZ_CP011314\|CRISPRCasFinder	142518-142551	34	NZ_CP034201	Klebsiella pneumoniae subsp. pneumoniae strain KpvST383_NDM_OXA-48 plasmid pKpvST383L, complete sequence	53165-53198	2	0.941
NZ_CP011314_1	1.1\|142518\|34\|NZ_CP011314\|CRISPRCasFinder	142518-142551	34	NZ_CP050380	Klebsiella pneumoniae strain 51015 plasmid p51015_NDM_1, complete sequence	332653-332686	2	0.941
NZ_CP011314_1	1.1\|142518\|34\|NZ_CP011314\|CRISPRCasFinder	142518-142551	34	NZ_CP024507	Klebsiella pneumoniae strain KSB2_1B plasmid unnamed1, complete sequence	42060-42093	2	0.941
NZ_CP011314_1	1.1\|142518\|34\|NZ_CP011314\|CRISPRCasFinder	142518-142551	34	NZ_CP031372	Klebsiella pneumoniae strain KpvST101_OXA-48 plasmid pKpvST101_5, complete sequence	144869-144902	2	0.941
NZ_CP011314_1	1.1\|142518\|34\|NZ_CP011314\|CRISPRCasFinder	142518-142551	34	NZ_CP040726	Klebsiella pneumoniae strain KpvST147B_SE1_1_NDM plasmid pKpvST147B_virulence, complete sequence	300533-300566	2	0.941
NZ_CP011314_2	2.1\|172059\|33\|NZ_CP011314\|PILER-CR	172059-172091	33	CP052804	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S973 plasmid pN17S0973, complete sequence	113091-113123	2	0.939
NZ_CP011314_2	2.1\|172059\|33\|NZ_CP011314\|PILER-CR	172059-172091	33	CP038508	Salmonella enterica subsp. enterica serovar Infantis strain FARPER-219 plasmid p-F219, complete sequence	228634-228666	2	0.939
NZ_CP011314_2	2.1\|172059\|33\|NZ_CP011314\|PILER-CR	172059-172091	33	CP052788	Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0611 plasmid pN19S0611, complete sequence	321488-321520	2	0.939
NZ_CP011314_2	2.1\|172059\|33\|NZ_CP011314\|PILER-CR	172059-172091	33	CP052786	Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0641 plasmid pN19S0641, complete sequence	10079-10111	2	0.939
NZ_CP011314_2	2.1\|172059\|33\|NZ_CP011314\|PILER-CR	172059-172091	33	CP052838	Salmonella enterica subsp. enterica serovar Infantis strain CVM N16S097 plasmid pN16S097, complete sequence	13470-13502	2	0.939
NZ_CP011314_2	2.1\|172059\|33\|NZ_CP011314\|PILER-CR	172059-172091	33	CP051676	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1234 plasmid pN16S1234, complete sequence	201786-201818	2	0.939
NZ_CP011314_2	2.1\|172059\|33\|NZ_CP011314\|PILER-CR	172059-172091	33	CP052779	Salmonella enterica strain 19TN07GT06K-S plasmid pN19S1233, complete sequence	212524-212556	2	0.939
NZ_CP011314_2	2.1\|172059\|33\|NZ_CP011314\|PILER-CR	172059-172091	33	CP052832	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1040 plasmid pN17S1040, complete sequence	277011-277043	2	0.939
NZ_CP011314_2	2.1\|172059\|33\|NZ_CP011314\|PILER-CR	172059-172091	33	MN310378	Klebsiella pneumoniae strain A2293 plasmid pA2293-Ct2, complete sequence	73380-73412	2	0.939
NZ_CP011314_2	2.1\|172059\|33\|NZ_CP011314\|PILER-CR	172059-172091	33	CP052806	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S816 plasmid pN17S0816, complete sequence	282696-282728	2	0.939
NZ_CP011314_2	2.1\|172059\|33\|NZ_CP011314\|PILER-CR	172059-172091	33	CP052818	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1509 plasmid pN17S1509, complete sequence	1788-1820	2	0.939
NZ_CP011314_2	2.1\|172059\|33\|NZ_CP011314\|PILER-CR	172059-172091	33	NZ_MH476540	Klebsiella pneumoniae strain KP1276 plasmid pIA/C-KLUC, complete sequence	87104-87136	2	0.939
NZ_CP011314_2	2.1\|172059\|33\|NZ_CP011314\|PILER-CR	172059-172091	33	CP052795	Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0125 plasmid pN19S0125, complete sequence	166287-166319	2	0.939
NZ_CP011314_2	2.1\|172059\|33\|NZ_CP011314\|PILER-CR	172059-172091	33	NZ_CP047882	Salmonella enterica subsp. enterica serovar Infantis strain 119944 plasmid pESI, complete sequence	264306-264338	2	0.939
NZ_CP011314_2	2.1\|172059\|33\|NZ_CP011314\|PILER-CR	172059-172091	33	CP052802	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S976 plasmid pN17S0976, complete sequence	197576-197608	2	0.939
NZ_CP011314_2	2.1\|172059\|33\|NZ_CP011314\|PILER-CR	172059-172091	33	CP052840	Salmonella enterica subsp. enterica serovar Infantis strain CVM N16S024 plasmid pN16S024, complete sequence	9544-9576	2	0.939
NZ_CP011314_2	2.1\|172059\|33\|NZ_CP011314\|PILER-CR	172059-172091	33	CP052836	Salmonella enterica subsp. enterica serovar Infantis strain CVM N16S103 plasmid pN16S103, complete sequence	222743-222775	2	0.939
NZ_CP011314_2	2.1\|172059\|33\|NZ_CP011314\|PILER-CR	172059-172091	33	CP052828	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1126 plasmid pN17S1126, complete sequence	8856-8888	2	0.939
NZ_CP011314_2	2.1\|172059\|33\|NZ_CP011314\|PILER-CR	172059-172091	33	CP052826	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1245 plasmid pN17S0637, complete sequence	292607-292639	2	0.939
NZ_CP011314_2	2.1\|172059\|33\|NZ_CP011314\|PILER-CR	172059-172091	33	NZ_CP016409	Salmonella enterica subsp. enterica serovar Infantis strain FSIS1502916 plasmid pFSIS1502916, complete sequence	299316-299348	2	0.939
NZ_CP011314_2	2.1\|172059\|33\|NZ_CP011314\|PILER-CR	172059-172091	33	NZ_CP016407	Salmonella enterica subsp. enterica serovar Infantis strain FSIS1502169 plasmid pFSIS1502169, complete sequence	299920-299952	2	0.939
NZ_CP011314_2	2.1\|172059\|33\|NZ_CP011314\|PILER-CR	172059-172091	33	NZ_CP016413	Salmonella enterica subsp. enterica serovar Infantis strain CVM44454 plasmid pCVM44454, complete sequence	295999-296031	2	0.939
NZ_CP011314_2	2.1\|172059\|33\|NZ_CP011314\|PILER-CR	172059-172091	33	NZ_CP016411	Salmonella enterica subsp. enterica serovar Infantis strain N55391 plasmid pN55391, complete sequence	293612-293644	2	0.939
NZ_CP011314_2	2.1\|172059\|33\|NZ_CP011314\|PILER-CR	172059-172091	33	CP052814	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S349 plasmid pN17S0349, complete sequence	281790-281822	2	0.939
NZ_CP011314_2	2.1\|172059\|33\|NZ_CP011314\|PILER-CR	172059-172091	33	NZ_MG764552	Klebsiella pneumoniae strain A1763 plasmid pA1763-Ct2, complete sequence	61314-61346	2	0.939
NZ_CP011314_2	2.2\|172115\|41\|NZ_CP011314\|PILER-CR	172115-172155	41	NZ_CP053897	Providencia rettgeri strain YPR31 plasmid pYPR31, complete sequence	75936-75976	2	0.951
NZ_CP011314_2	2.2\|172115\|41\|NZ_CP011314\|PILER-CR	172115-172155	41	MN310378	Klebsiella pneumoniae strain A2293 plasmid pA2293-Ct2, complete sequence	73436-73476	2	0.951
NZ_CP011314_2	2.2\|172115\|41\|NZ_CP011314\|PILER-CR	172115-172155	41	NZ_MH476540	Klebsiella pneumoniae strain KP1276 plasmid pIA/C-KLUC, complete sequence	87160-87200	2	0.951
NZ_CP011314_2	2.2\|172115\|41\|NZ_CP011314\|PILER-CR	172115-172155	41	NZ_MG764552	Klebsiella pneumoniae strain A1763 plasmid pA1763-Ct2, complete sequence	61250-61290	2	0.951

1. spacer 1.1|142518|34|NZ_CP011314|CRISPRCasFinder matches to CP052310 (Klebsiella pneumoniae strain E16KP0102 plasmid pE16KP0102-1, complete sequence) position: , mismatch: 0, identity: 1.0

aaccgtggacaacacgaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
**********************************

2. spacer 1.1|142518|34|NZ_CP011314|CRISPRCasFinder matches to NZ_CP018720 (Klebsiella pneumoniae strain KP_Goe_828304 plasmid pKp_Goe_304-1, complete sequence) position: , mismatch: 0, identity: 1.0

aaccgtggacaacacgaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
**********************************

3. spacer 1.1|142518|34|NZ_CP011314|CRISPRCasFinder matches to NZ_CP018702 (Klebsiella pneumoniae strain Kp_Goe_827024 plasmid pKp_Goe_024-1, complete sequence) position: , mismatch: 0, identity: 1.0

aaccgtggacaacacgaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
**********************************

4. spacer 1.1|142518|34|NZ_CP011314|CRISPRCasFinder matches to CP052325 (Klebsiella pneumoniae strain E16KP0032 plasmid pE16KP0032-1, complete sequence) position: , mismatch: 0, identity: 1.0

aaccgtggacaacacgaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
**********************************

5. spacer 1.1|142518|34|NZ_CP011314|CRISPRCasFinder matches to NZ_CP015501 (Klebsiella pneumoniae strain SKGH01 plasmid unnamed 1, complete sequence) position: , mismatch: 0, identity: 1.0

aaccgtggacaacacgaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
**********************************

6. spacer 1.1|142518|34|NZ_CP011314|CRISPRCasFinder matches to CP052558 (Klebsiella pneumoniae strain A17KP0008 plasmid pA17KP0008-1, complete sequence) position: , mismatch: 0, identity: 1.0

aaccgtggacaacacgaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
**********************************

7. spacer 1.1|142518|34|NZ_CP011314|CRISPRCasFinder matches to CP052269 (Klebsiella pneumoniae strain E16KP0268 plasmid pE16K0268-1, complete sequence) position: , mismatch: 0, identity: 1.0

aaccgtggacaacacgaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
**********************************

8. spacer 1.1|142518|34|NZ_CP011314|CRISPRCasFinder matches to CP052233 (Klebsiella pneumoniae strain E17KP0033 plasmid pE17KP0033-2, complete sequence) position: , mismatch: 0, identity: 1.0

aaccgtggacaacacgaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
**********************************

9. spacer 1.1|142518|34|NZ_CP011314|CRISPRCasFinder matches to CP052208 (Klebsiella pneumoniae strain E17KP0085 plasmid pE17KP0085-1, complete sequence) position: , mismatch: 0, identity: 1.0

aaccgtggacaacacgaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
**********************************

10. spacer 1.1|142518|34|NZ_CP011314|CRISPRCasFinder matches to NZ_CP026172 (Klebsiella pneumoniae strain KPNIH50 plasmid pKPN-bbef, complete sequence) position: , mismatch: 0, identity: 1.0

aaccgtggacaacacgaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
**********************************

11. spacer 1.1|142518|34|NZ_CP011314|CRISPRCasFinder matches to NZ_CP026186 (Klebsiella pneumoniae strain KPNIH49 plasmid pKPN-3967, complete sequence) position: , mismatch: 0, identity: 1.0

aaccgtggacaacacgaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
**********************************

12. spacer 1.1|142518|34|NZ_CP011314|CRISPRCasFinder matches to NZ_CP031580 (Klebsiella pneumoniae strain N4b plasmid p1502320-3) position: , mismatch: 0, identity: 1.0

aaccgtggacaacacgaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
**********************************

13. spacer 1.1|142518|34|NZ_CP011314|CRISPRCasFinder matches to CP052327 (Klebsiella pneumoniae strain E16KP0017 plasmid pE16K0017-1, complete sequence) position: , mismatch: 0, identity: 1.0

aaccgtggacaacacgaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
**********************************

14. spacer 1.1|142518|34|NZ_CP011314|CRISPRCasFinder matches to NZ_CP034681 (Klebsiella quasipneumoniae strain D120-1 plasmid pD120-1_296kb, complete sequence) position: , mismatch: 0, identity: 1.0

aaccgtggacaacacgaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
**********************************

15. spacer 1.1|142518|34|NZ_CP011314|CRISPRCasFinder matches to CP052539 (Klebsiella pneumoniae strain B16KP0141 plasmid pB16KP0141-2, complete sequence) position: , mismatch: 0, identity: 1.0

aaccgtggacaacacgaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
**********************************

16. spacer 1.1|142518|34|NZ_CP011314|CRISPRCasFinder matches to NZ_CP023723 (Klebsiella pneumoniae strain TVGHCRE225 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

aaccgtggacaacacgaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
**********************************

17. spacer 1.1|142518|34|NZ_CP011314|CRISPRCasFinder matches to NZ_CP041935 (Klebsiella pneumoniae strain KP14003 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

aaccgtggacaacacgaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
**********************************

18. spacer 1.1|142518|34|NZ_CP011314|CRISPRCasFinder matches to CP052236 (Klebsiella pneumoniae strain E17KP0029 plasmid pE17KP0029-1, complete sequence) position: , mismatch: 0, identity: 1.0

aaccgtggacaacacgaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
**********************************

19. spacer 1.1|142518|34|NZ_CP011314|CRISPRCasFinder matches to NZ_CP043933 (Klebsiella pneumoniae strain 555 plasmid pSCKLB555-1, complete sequence) position: , mismatch: 0, identity: 1.0

aaccgtggacaacacgaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
**********************************

20. spacer 1.1|142518|34|NZ_CP011314|CRISPRCasFinder matches to CP052240 (Klebsiella pneumoniae strain E17KP0027 plasmid pE17KP0027-1, complete sequence) position: , mismatch: 0, identity: 1.0

aaccgtggacaacacgaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
**********************************

21. spacer 1.1|142518|34|NZ_CP011314|CRISPRCasFinder matches to CP052242 (Klebsiella pneumoniae strain E17KP0019 plasmid pE17KP0019-1, complete sequence) position: , mismatch: 0, identity: 1.0

aaccgtggacaacacgaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
**********************************

22. spacer 1.1|142518|34|NZ_CP011314|CRISPRCasFinder matches to NZ_CP018696 (Klebsiella pneumoniae strain Kp_Goe_149832 plasmid pKp_Goe_832-1, complete sequence) position: , mismatch: 0, identity: 1.0

aaccgtggacaacacgaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
**********************************

23. spacer 1.1|142518|34|NZ_CP011314|CRISPRCasFinder matches to NZ_CP018708 (Klebsiella pneumoniae strain Kp_Goe_827026 plasmid pKp_Goe_026-1, complete sequence) position: , mismatch: 0, identity: 1.0

aaccgtggacaacacgaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
**********************************

24. spacer 1.1|142518|34|NZ_CP011314|CRISPRCasFinder matches to NZ_MK262712 (Klebsiella pneumoniae strain KP18-29 plasmid p18-29-MDR, complete sequence) position: , mismatch: 0, identity: 1.0

aaccgtggacaacacgaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
**********************************

25. spacer 1.1|142518|34|NZ_CP011314|CRISPRCasFinder matches to NZ_CP014776 (Pluralibacter gergoviae strain FB2 plasmid pFB2.1, complete sequence) position: , mismatch: 0, identity: 1.0

aaccgtggacaacacgaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
**********************************

26. spacer 1.1|142518|34|NZ_CP011314|CRISPRCasFinder matches to NZ_MG845200 (Klebsiella oxytoca strain TJ11 plasmid pNDM-TJ11, complete sequence) position: , mismatch: 0, identity: 1.0

aaccgtggacaacacgaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
**********************************

27. spacer 1.1|142518|34|NZ_CP011314|CRISPRCasFinder matches to NZ_MG288682 (Klebsiella aerogenes strain E20 plasmid pE20-HI3, complete sequence) position: , mismatch: 0, identity: 1.0

aaccgtggacaacacgaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
**********************************

28. spacer 1.1|142518|34|NZ_CP011314|CRISPRCasFinder matches to NZ_MG845201 (Klebsiella pneumoniae strain TJ03 plasmid pNDM-TJ03, complete sequence) position: , mismatch: 0, identity: 1.0

aaccgtggacaacacgaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
**********************************

29. spacer 1.1|142518|34|NZ_CP011314|CRISPRCasFinder matches to NZ_CP050068 (Klebsiella aerogenes strain 035 plasmid p35, complete sequence) position: , mismatch: 0, identity: 1.0

aaccgtggacaacacgaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
**********************************

30. spacer 1.1|142518|34|NZ_CP011314|CRISPRCasFinder matches to NZ_CP017986 (Klebsiella pneumoniae strain 825795-1 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

aaccgtggacaacacgaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
**********************************

31. spacer 1.1|142518|34|NZ_CP011314|CRISPRCasFinder matches to NZ_CP018714 (Klebsiella pneumoniae strain Kp_Goe_152021 plasmid pKp_Goe_021-1, complete sequence) position: , mismatch: 0, identity: 1.0

aaccgtggacaacacgaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
**********************************

32. spacer 1.1|142518|34|NZ_CP011314|CRISPRCasFinder matches to NZ_LN824134 (Klebsiella pneumoniae genome assembly MS6671.v1, plasmid : _Plasmid_A_Kpneumoniae_MS6671) position: , mismatch: 0, identity: 1.0

aaccgtggacaacacgaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
**********************************

33. spacer 1.1|142518|34|NZ_CP011314|CRISPRCasFinder matches to NZ_CP031818 (Klebsiella pneumoniae strain INF235-sc-2280127 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

aaccgtggacaacacgaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
**********************************

34. spacer 1.1|142518|34|NZ_CP011314|CRISPRCasFinder matches to NZ_CP042866 (Escherichia coli strain ATCC BAA-196 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

aaccgtggacaacacgaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
**********************************

35. spacer 1.1|142518|34|NZ_CP011314|CRISPRCasFinder matches to NZ_CP026398 (Klebsiella pneumoniae strain KPNIH48 plasmid pKPN-edaa, complete sequence) position: , mismatch: 0, identity: 1.0

aaccgtggacaacacgaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
**********************************

36. spacer 1.1|142518|34|NZ_CP011314|CRISPRCasFinder matches to NZ_CP018961 (Escherichia coli strain Ecol_422 plasmid pEC422_1, complete sequence) position: , mismatch: 0, identity: 1.0

aaccgtggacaacacgaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
**********************************

37. spacer 1.1|142518|34|NZ_CP011314|CRISPRCasFinder matches to NZ_CP011314 (Klebsiella pneumoniae subsp. pneumoniae strain 234-12 plasmid pKpn23412-362, complete sequence) position: , mismatch: 0, identity: 1.0

aaccgtggacaacacgaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
**********************************

38. spacer 1.1|142518|34|NZ_CP011314|CRISPRCasFinder matches to NZ_CP018313 (Klebsiella pneumoniae strain Kp_Goe_822579 plasmid pKp_Goe_579-1, complete sequence) position: , mismatch: 0, identity: 1.0

aaccgtggacaacacgaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
**********************************

39. spacer 1.1|142518|34|NZ_CP011314|CRISPRCasFinder matches to NZ_CP027156 (Klebsiella pneumoniae strain AR_0363 plasmid unnamed4) position: , mismatch: 0, identity: 1.0

aaccgtggacaacacgaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
**********************************

40. spacer 1.1|142518|34|NZ_CP011314|CRISPRCasFinder matches to NZ_CP044381 (Klebsiella pneumoniae strain 2018S07-013 plasmid p2018S07-013-1, complete sequence) position: , mismatch: 0, identity: 1.0

aaccgtggacaacacgaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
**********************************

41. spacer 1.1|142518|34|NZ_CP011314|CRISPRCasFinder matches to NZ_CP018687 (Klebsiella pneumoniae strain Kp_Goe_149473 plasmid pKp_Goe_473-1, complete sequence) position: , mismatch: 0, identity: 1.0

aaccgtggacaacacgaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
**********************************

42. spacer 1.1|142518|34|NZ_CP011314|CRISPRCasFinder matches to NZ_CP018339 (Klebsiella pneumoniae isolate Kp_Goe_154414 plasmid pKp_Goe_414-1, complete sequence) position: , mismatch: 0, identity: 1.0

aaccgtggacaacacgaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
**********************************

43. spacer 1.1|142518|34|NZ_CP011314|CRISPRCasFinder matches to NZ_MK413722 (Klebsiella pneumoniae strain 332306 plasmid p332306-HI3, complete sequence) position: , mismatch: 0, identity: 1.0

aaccgtggacaacacgaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
**********************************

44. spacer 1.1|142518|34|NZ_CP011314|CRISPRCasFinder matches to HG918041 (Klebsiella pneumoniae Kp15 plasmid pENVA complete sequence) position: , mismatch: 0, identity: 1.0

aaccgtggacaacacgaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
**********************************

45. spacer 1.1|142518|34|NZ_CP011314|CRISPRCasFinder matches to NZ_MF150122 (Klebsiella pneumoniae strain A64477 plasmid pKP64477b, complete sequence) position: , mismatch: 0, identity: 1.0

aaccgtggacaacacgaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
**********************************

46. spacer 1.1|142518|34|NZ_CP011314|CRISPRCasFinder matches to NZ_CP032223 (Klebsiella pneumoniae strain AR_0046 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

aaccgtggacaacacgaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
**********************************

47. spacer 2.1|172059|33|NZ_CP011314|PILER-CR matches to NZ_KX774387 (Providencia rettgeri strain 30905 plasmid pC131, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

48. spacer 2.1|172059|33|NZ_CP011314|PILER-CR matches to NZ_CP053895 (Proteus mirabilis strain JPM24 plasmid pJPM24, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

49. spacer 2.1|172059|33|NZ_CP011314|PILER-CR matches to NZ_KU963389 (Escherichia coli strain ECO37 plasmid ECO37P1, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

50. spacer 2.1|172059|33|NZ_CP011314|PILER-CR matches to NZ_CP047288 (Proteus cibarius strain G11 plasmid p152, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

51. spacer 2.1|172059|33|NZ_CP011314|PILER-CR matches to NZ_CP044485 (Acinetobacter schindleri strain HZE30-1 plasmid pHZE30-1-2, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

52. spacer 2.1|172059|33|NZ_CP011314|PILER-CR matches to NZ_CP025853 (Escherichia coli strain 510016 plasmid p510016_36, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

53. spacer 2.1|172059|33|NZ_CP011314|PILER-CR matches to NZ_KT754165 (Shigella dysenteriae 1 strain 93-531-1 plasmid p93-531-1, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

54. spacer 2.1|172059|33|NZ_CP011314|PILER-CR matches to NZ_CP053372 (Proteus cibarius strain G32 plasmid pG32-177, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

55. spacer 2.1|172059|33|NZ_CP011314|PILER-CR matches to NZ_CP024247 (Escherichia coli O27:H7 strain B4103-1 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

56. spacer 2.1|172059|33|NZ_CP011314|PILER-CR matches to NZ_CP053043 (Proteus cibarius strain HNCF44W plasmid pHNCF44W_NDM-1, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

57. spacer 2.1|172059|33|NZ_CP011314|PILER-CR matches to JX469830 (Uncultured bacterium plasmid pG527, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

58. spacer 2.1|172059|33|NZ_CP011314|PILER-CR matches to NZ_CP013819 (Piscirickettsia salmonis strain AY3800B plasmid p3PS10, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

59. spacer 2.1|172059|33|NZ_CP011314|PILER-CR matches to CP025925 (Escherichia coli strain 520873 plasmid p520873_36, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

60. spacer 2.1|172059|33|NZ_CP011314|PILER-CR matches to CP025875 (Escherichia coli strain 503458 plasmid p503458_37, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

61. spacer 2.1|172059|33|NZ_CP011314|PILER-CR matches to NZ_CP013795 (Piscirickettsia salmonis strain AY6297B plasmid p4PS8, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

62. spacer 2.1|172059|33|NZ_CP011314|PILER-CR matches to NZ_CP023380 (Escherichia coli strain 127 plasmid p43, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

63. spacer 2.1|172059|33|NZ_CP011314|PILER-CR matches to NZ_CP011314 (Klebsiella pneumoniae subsp. pneumoniae strain 234-12 plasmid pKpn23412-362, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

64. spacer 2.1|172059|33|NZ_CP011314|PILER-CR matches to NC_008357 (Pseudomonas aeruginosa plasmid pBS228, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

65. spacer 2.1|172059|33|NZ_CP011314|PILER-CR matches to NZ_CP027138 (Escherichia coli strain AR_0369 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

66. spacer 2.1|172059|33|NZ_CP011314|PILER-CR matches to NZ_CP022673 (Shigella sonnei strain 866 plasmid p866, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

67. spacer 2.1|172059|33|NZ_CP011314|PILER-CR matches to NZ_CP045128 (Acinetobacter indicus strain XG03 plasmid pXG03-X3, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

68. spacer 2.1|172059|33|NZ_CP011314|PILER-CR matches to NZ_LT985250 (Escherichia coli strain 170 plasmid RCS38_p, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

69. spacer 2.1|172059|33|NZ_CP011314|PILER-CR matches to NZ_MK360096 (Salmonella enterica strain 13-SA02717 plasmid pSE13-SA02717, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

70. spacer 2.1|172059|33|NZ_CP011314|PILER-CR matches to NZ_CP053897 (Providencia rettgeri strain YPR31 plasmid pYPR31, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

71. spacer 2.1|172059|33|NZ_CP011314|PILER-CR matches to NZ_MF150120 (Klebsiella pneumoniae strain A64477 plasmid pKP64477d, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

72. spacer 2.1|172059|33|NZ_CP011314|PILER-CR matches to NZ_KX756453 (Klebsiella pneumoniae strain 1194/11 plasmid pKP1194a, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

73. spacer 2.1|172059|33|NZ_CP011314|PILER-CR matches to NC_015472 (Escherichia coli plasmid pECTm80, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

74. spacer 2.1|172059|33|NZ_CP011314|PILER-CR matches to NZ_CP013800 (Piscirickettsia salmonis strain AY6532B plasmid p4PS9, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

75. spacer 2.1|172059|33|NZ_CP011314|PILER-CR matches to MG516911 (Proteus mirabilis plasmid pPm60, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

76. spacer 2.1|172059|33|NZ_CP011314|PILER-CR matches to NZ_CP003997 (Klebsiella pneumoniae subsp. pneumoniae Kp13 plasmid pKP13d, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

77. spacer 2.1|172059|33|NZ_CP011314|PILER-CR matches to CP054380 (Escherichia coli strain SCU-175 plasmid pSCU-175-1, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

78. spacer 2.1|172059|33|NZ_CP011314|PILER-CR matches to NC_002525 (Escherichia coli K-12 plasmid R721, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

79. spacer 2.1|172059|33|NZ_CP011314|PILER-CR matches to NZ_CP048015 (Acinetobacter towneri strain 205 plasmid pAT205, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

80. spacer 2.1|172059|33|NZ_CP011314|PILER-CR matches to NZ_CP034054 (Klebsiella pneumoniae strain KP_NORM_BLD_2015_112126 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

81. spacer 2.1|172059|33|NZ_CP011314|PILER-CR matches to NZ_CP047114 (Proteus mirabilis strain SCBX1.1 plasmid plas1.1.2, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

82. spacer 2.1|172059|33|NZ_CP011314|PILER-CR matches to NZ_CP034046 (Klebsiella pneumoniae strain KP_NORM_BLD_2014_104014 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

83. spacer 2.1|172059|33|NZ_CP011314|PILER-CR matches to NZ_CP027700 (Klebsiella pneumoniae strain KP30835 plasmid unnamed5, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

84. spacer 2.1|172059|33|NZ_CP011314|PILER-CR matches to NZ_CP053899 (Proteus mirabilis strain YPM35 plasmid pJPM35-1, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

85. spacer 2.1|172059|33|NZ_CP011314|PILER-CR matches to NZ_MK264770 (Klebsiella pneumoniae strain KP89 plasmid pKP89, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

86. spacer 2.2|172115|41|NZ_CP011314|PILER-CR matches to NZ_KX774387 (Providencia rettgeri strain 30905 plasmid pC131, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

87. spacer 2.2|172115|41|NZ_CP011314|PILER-CR matches to NZ_MF150120 (Klebsiella pneumoniae strain A64477 plasmid pKP64477d, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

88. spacer 2.2|172115|41|NZ_CP011314|PILER-CR matches to NZ_CP053895 (Proteus mirabilis strain JPM24 plasmid pJPM24, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

89. spacer 2.2|172115|41|NZ_CP011314|PILER-CR matches to NZ_KX756453 (Klebsiella pneumoniae strain 1194/11 plasmid pKP1194a, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

90. spacer 2.2|172115|41|NZ_CP011314|PILER-CR matches to NZ_KU963389 (Escherichia coli strain ECO37 plasmid ECO37P1, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

91. spacer 2.2|172115|41|NZ_CP011314|PILER-CR matches to NZ_CP047288 (Proteus cibarius strain G11 plasmid p152, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

92. spacer 2.2|172115|41|NZ_CP011314|PILER-CR matches to NC_015472 (Escherichia coli plasmid pECTm80, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

93. spacer 2.2|172115|41|NZ_CP011314|PILER-CR matches to NZ_CP044485 (Acinetobacter schindleri strain HZE30-1 plasmid pHZE30-1-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

94. spacer 2.2|172115|41|NZ_CP011314|PILER-CR matches to NZ_CP025853 (Escherichia coli strain 510016 plasmid p510016_36, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

95. spacer 2.2|172115|41|NZ_CP011314|PILER-CR matches to NZ_KT754165 (Shigella dysenteriae 1 strain 93-531-1 plasmid p93-531-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

96. spacer 2.2|172115|41|NZ_CP011314|PILER-CR matches to NZ_CP013800 (Piscirickettsia salmonis strain AY6532B plasmid p4PS9, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

97. spacer 2.2|172115|41|NZ_CP011314|PILER-CR matches to NZ_CP053372 (Proteus cibarius strain G32 plasmid pG32-177, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

98. spacer 2.2|172115|41|NZ_CP011314|PILER-CR matches to NZ_CP024247 (Escherichia coli O27:H7 strain B4103-1 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

99. spacer 2.2|172115|41|NZ_CP011314|PILER-CR matches to NZ_CP053043 (Proteus cibarius strain HNCF44W plasmid pHNCF44W_NDM-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

100. spacer 2.2|172115|41|NZ_CP011314|PILER-CR matches to MG516911 (Proteus mirabilis plasmid pPm60, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

101. spacer 2.2|172115|41|NZ_CP011314|PILER-CR matches to JX469830 (Uncultured bacterium plasmid pG527, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

102. spacer 2.2|172115|41|NZ_CP011314|PILER-CR matches to NZ_CP013819 (Piscirickettsia salmonis strain AY3800B plasmid p3PS10, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

103. spacer 2.2|172115|41|NZ_CP011314|PILER-CR matches to NZ_CP003997 (Klebsiella pneumoniae subsp. pneumoniae Kp13 plasmid pKP13d, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

104. spacer 2.2|172115|41|NZ_CP011314|PILER-CR matches to CP025925 (Escherichia coli strain 520873 plasmid p520873_36, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

105. spacer 2.2|172115|41|NZ_CP011314|PILER-CR matches to CP025875 (Escherichia coli strain 503458 plasmid p503458_37, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

106. spacer 2.2|172115|41|NZ_CP011314|PILER-CR matches to NZ_CP013795 (Piscirickettsia salmonis strain AY6297B plasmid p4PS8, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

107. spacer 2.2|172115|41|NZ_CP011314|PILER-CR matches to CP054380 (Escherichia coli strain SCU-175 plasmid pSCU-175-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

108. spacer 2.2|172115|41|NZ_CP011314|PILER-CR matches to NC_002525 (Escherichia coli K-12 plasmid R721, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

109. spacer 2.2|172115|41|NZ_CP011314|PILER-CR matches to NZ_CP023380 (Escherichia coli strain 127 plasmid p43, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

110. spacer 2.2|172115|41|NZ_CP011314|PILER-CR matches to NZ_CP011314 (Klebsiella pneumoniae subsp. pneumoniae strain 234-12 plasmid pKpn23412-362, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

111. spacer 2.2|172115|41|NZ_CP011314|PILER-CR matches to NC_008357 (Pseudomonas aeruginosa plasmid pBS228, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

112. spacer 2.2|172115|41|NZ_CP011314|PILER-CR matches to NZ_CP027138 (Escherichia coli strain AR_0369 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

113. spacer 2.2|172115|41|NZ_CP011314|PILER-CR matches to NZ_CP022673 (Shigella sonnei strain 866 plasmid p866, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

114. spacer 2.2|172115|41|NZ_CP011314|PILER-CR matches to NZ_CP048015 (Acinetobacter towneri strain 205 plasmid pAT205, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

115. spacer 2.2|172115|41|NZ_CP011314|PILER-CR matches to NZ_CP034054 (Klebsiella pneumoniae strain KP_NORM_BLD_2015_112126 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

116. spacer 2.2|172115|41|NZ_CP011314|PILER-CR matches to NZ_CP047114 (Proteus mirabilis strain SCBX1.1 plasmid plas1.1.2, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

117. spacer 2.2|172115|41|NZ_CP011314|PILER-CR matches to NZ_CP034046 (Klebsiella pneumoniae strain KP_NORM_BLD_2014_104014 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

118. spacer 2.2|172115|41|NZ_CP011314|PILER-CR matches to NZ_CP045128 (Acinetobacter indicus strain XG03 plasmid pXG03-X3, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

119. spacer 2.2|172115|41|NZ_CP011314|PILER-CR matches to NZ_CP027700 (Klebsiella pneumoniae strain KP30835 plasmid unnamed5, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

120. spacer 2.2|172115|41|NZ_CP011314|PILER-CR matches to NZ_LT985250 (Escherichia coli strain 170 plasmid RCS38_p, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

121. spacer 2.2|172115|41|NZ_CP011314|PILER-CR matches to NZ_MK360096 (Salmonella enterica strain 13-SA02717 plasmid pSE13-SA02717, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

122. spacer 2.2|172115|41|NZ_CP011314|PILER-CR matches to NZ_CP053899 (Proteus mirabilis strain YPM35 plasmid pJPM35-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

123. spacer 2.2|172115|41|NZ_CP011314|PILER-CR matches to NZ_MK264770 (Klebsiella pneumoniae strain KP89 plasmid pKP89, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

124. spacer 1.1|142518|34|NZ_CP011314|CRISPRCasFinder matches to NZ_CP034681 (Klebsiella quasipneumoniae strain D120-1 plasmid pD120-1_296kb, complete sequence) position: , mismatch: 1, identity: 0.971

aaccgtggacaacacgaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacaccaccgataacccccgcaca	Protospacer
*************** ******************

125. spacer 1.1|142518|34|NZ_CP011314|CRISPRCasFinder matches to NZ_CP023723 (Klebsiella pneumoniae strain TVGHCRE225 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.971

aaccgtggacaacacgaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacaccaccgataacccccgcaca	Protospacer
*************** ******************

126. spacer 1.1|142518|34|NZ_CP011314|CRISPRCasFinder matches to NZ_CP014776 (Pluralibacter gergoviae strain FB2 plasmid pFB2.1, complete sequence) position: , mismatch: 1, identity: 0.971

aaccgtggacaacacgaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacaccaccgataacccccgcaca	Protospacer
*************** ******************

127. spacer 1.1|142518|34|NZ_CP011314|CRISPRCasFinder matches to NZ_MG288682 (Klebsiella aerogenes strain E20 plasmid pE20-HI3, complete sequence) position: , mismatch: 1, identity: 0.971

aaccgtggacaacacgaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacaccaccgataacccccgcaca	Protospacer
*************** ******************

128. spacer 1.1|142518|34|NZ_CP011314|CRISPRCasFinder matches to NZ_MK413722 (Klebsiella pneumoniae strain 332306 plasmid p332306-HI3, complete sequence) position: , mismatch: 1, identity: 0.971

aaccgtggacaacacgaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacaccaccgataacccccgcaca	Protospacer
*************** ******************

129. spacer 1.1|142518|34|NZ_CP011314|CRISPRCasFinder matches to NZ_CP020848 (Klebsiella variicola strain KPN1481 plasmid pKPN1481-1, complete sequence) position: , mismatch: 1, identity: 0.971

aaccgtggacaacacgaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacaccaccgataacccccgcaca	Protospacer
*************** ******************

130. spacer 1.1|142518|34|NZ_CP011314|CRISPRCasFinder matches to NZ_CP036336 (Klebsiella pneumoniae strain BP327 plasmid pIncHIB, complete sequence) position: , mismatch: 1, identity: 0.971

aaccgtggacaacacgaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacaccaccgataacccccgcaca	Protospacer
*************** ******************

131. spacer 1.1|142518|34|NZ_CP011314|CRISPRCasFinder matches to NZ_CP041093 (Klebsiella pneumoniae subsp. pneumoniae strain KPCTRSRTH01 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.971

aaccgtggacaacacgaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacaccaccgataacccccgcaca	Protospacer
*************** ******************

132. spacer 1.1|142518|34|NZ_CP011314|CRISPRCasFinder matches to NZ_CP028791 (Klebsiella pneumoniae strain WCHKP020030 plasmid pOXA1_020030, complete sequence) position: , mismatch: 1, identity: 0.971

aaccgtggacaacacgaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacaccaccgataacccccgcaca	Protospacer
*************** ******************

133. spacer 1.1|142518|34|NZ_CP011314|CRISPRCasFinder matches to NZ_CP039526 (Klebsiella pneumoniae subsp. pneumoniae strain HB25-1 plasmid pHB25-1-vir, complete sequence) position: , mismatch: 1, identity: 0.971

aaccgtggacaacacgaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacaccaccgataacccccgcaca	Protospacer
*************** ******************

134. spacer 1.1|142518|34|NZ_CP011314|CRISPRCasFinder matches to CP050156 (Klebsiella pneumoniae plasmid Carbapenemase(NDM-1)_IncH1B, complete sequence) position: , mismatch: 1, identity: 0.971

aaccgtggacaacacgaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacaccaccgataacccccgcaca	Protospacer
*************** ******************

135. spacer 1.1|142518|34|NZ_CP011314|CRISPRCasFinder matches to NZ_MK413723 (Klebsiella pneumoniae strain 130721005 plasmid p721005-HI3, complete sequence) position: , mismatch: 1, identity: 0.971

aaccgtggacaacacgaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacaccaccgataacccccgcaca	Protospacer
*************** ******************

136. spacer 1.1|142518|34|NZ_CP011314|CRISPRCasFinder matches to NZ_MK413721 (Klebsiella pneumoniae strain 130504051 plasmid p504051-HI3, complete sequence) position: , mismatch: 1, identity: 0.971

aaccgtggacaacacgaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacaccaccgataacccccgcaca	Protospacer
*************** ******************

137. spacer 1.1|142518|34|NZ_CP011314|CRISPRCasFinder matches to NZ_MK191024 (Klebsiella pneumoniae strain KP17-16 plasmid p17-16-vir, complete sequence) position: , mismatch: 1, identity: 0.971

aaccgtggacaacacgaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacaccaccgataacccccgcaca	Protospacer
*************** ******************

138. spacer 1.1|142518|34|NZ_CP011314|CRISPRCasFinder matches to NZ_CP008933 (Klebsiella pneumoniae strain PMK1 plasmid pPMK1-NDM, complete sequence) position: , mismatch: 1, identity: 0.971

aaccgtggacaacacgaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacaccaccgataacccccgcaca	Protospacer
*************** ******************

139. spacer 1.1|142518|34|NZ_CP011314|CRISPRCasFinder matches to NC_016980 (Klebsiella pneumoniae plasmid pNDM-MAR, complete sequence) position: , mismatch: 1, identity: 0.971

aaccgtggacaacacgaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacaccaccgataacccccgcaca	Protospacer
*************** ******************

140. spacer 1.1|142518|34|NZ_CP011314|CRISPRCasFinder matches to NZ_CP025462 (Klebsiella pneumoniae strain F44 plasmid p44-1, complete sequence) position: , mismatch: 1, identity: 0.971

aaccgtggacaacacgaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacaccaccgataacccccgcaca	Protospacer
*************** ******************

141. spacer 1.1|142518|34|NZ_CP011314|CRISPRCasFinder matches to NZ_CP034201 (Klebsiella pneumoniae subsp. pneumoniae strain KpvST383_NDM_OXA-48 plasmid pKpvST383L, complete sequence) position: , mismatch: 2, identity: 0.941

aaccgtggacaacacgaccgataacccccgcaca	CRISPR spacer
gaccgtggacaacaccaccgataacccccgcaca	Protospacer
.************** ******************

142. spacer 1.1|142518|34|NZ_CP011314|CRISPRCasFinder matches to NZ_CP050380 (Klebsiella pneumoniae strain 51015 plasmid p51015_NDM_1, complete sequence) position: , mismatch: 2, identity: 0.941

aaccgtggacaacacgaccgataacccccgcaca	CRISPR spacer
gaccgtggacaacaccaccgataacccccgcaca	Protospacer
.************** ******************

143. spacer 1.1|142518|34|NZ_CP011314|CRISPRCasFinder matches to NZ_CP024507 (Klebsiella pneumoniae strain KSB2_1B plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.941

aaccgtggacaacacgaccgataacccccgcaca	CRISPR spacer
gaccgtggacaacaccaccgataacccccgcaca	Protospacer
.************** ******************

144. spacer 1.1|142518|34|NZ_CP011314|CRISPRCasFinder matches to NZ_CP031372 (Klebsiella pneumoniae strain KpvST101_OXA-48 plasmid pKpvST101_5, complete sequence) position: , mismatch: 2, identity: 0.941

aaccgtggacaacacgaccgataacccccgcaca	CRISPR spacer
gaccgtggacaacaccaccgataacccccgcaca	Protospacer
.************** ******************

145. spacer 1.1|142518|34|NZ_CP011314|CRISPRCasFinder matches to NZ_CP040726 (Klebsiella pneumoniae strain KpvST147B_SE1_1_NDM plasmid pKpvST147B_virulence, complete sequence) position: , mismatch: 2, identity: 0.941

aaccgtggacaacacgaccgataacccccgcaca	CRISPR spacer
gaccgtggacaacaccaccgataacccccgcaca	Protospacer
.************** ******************

146. spacer 2.1|172059|33|NZ_CP011314|PILER-CR matches to CP052804 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S973 plasmid pN17S0973, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

147. spacer 2.1|172059|33|NZ_CP011314|PILER-CR matches to CP038508 (Salmonella enterica subsp. enterica serovar Infantis strain FARPER-219 plasmid p-F219, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

148. spacer 2.1|172059|33|NZ_CP011314|PILER-CR matches to CP052788 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0611 plasmid pN19S0611, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

149. spacer 2.1|172059|33|NZ_CP011314|PILER-CR matches to CP052786 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0641 plasmid pN19S0641, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

150. spacer 2.1|172059|33|NZ_CP011314|PILER-CR matches to CP052838 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N16S097 plasmid pN16S097, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

151. spacer 2.1|172059|33|NZ_CP011314|PILER-CR matches to CP051676 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1234 plasmid pN16S1234, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

152. spacer 2.1|172059|33|NZ_CP011314|PILER-CR matches to CP052779 (Salmonella enterica strain 19TN07GT06K-S plasmid pN19S1233, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

153. spacer 2.1|172059|33|NZ_CP011314|PILER-CR matches to CP052832 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1040 plasmid pN17S1040, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

154. spacer 2.1|172059|33|NZ_CP011314|PILER-CR matches to MN310378 (Klebsiella pneumoniae strain A2293 plasmid pA2293-Ct2, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

155. spacer 2.1|172059|33|NZ_CP011314|PILER-CR matches to CP052806 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S816 plasmid pN17S0816, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

156. spacer 2.1|172059|33|NZ_CP011314|PILER-CR matches to CP052818 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1509 plasmid pN17S1509, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

157. spacer 2.1|172059|33|NZ_CP011314|PILER-CR matches to NZ_MH476540 (Klebsiella pneumoniae strain KP1276 plasmid pIA/C-KLUC, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

158. spacer 2.1|172059|33|NZ_CP011314|PILER-CR matches to CP052795 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0125 plasmid pN19S0125, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

159. spacer 2.1|172059|33|NZ_CP011314|PILER-CR matches to NZ_CP047882 (Salmonella enterica subsp. enterica serovar Infantis strain 119944 plasmid pESI, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

160. spacer 2.1|172059|33|NZ_CP011314|PILER-CR matches to CP052802 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S976 plasmid pN17S0976, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

161. spacer 2.1|172059|33|NZ_CP011314|PILER-CR matches to CP052840 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N16S024 plasmid pN16S024, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

162. spacer 2.1|172059|33|NZ_CP011314|PILER-CR matches to CP052836 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N16S103 plasmid pN16S103, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

163. spacer 2.1|172059|33|NZ_CP011314|PILER-CR matches to CP052828 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1126 plasmid pN17S1126, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

164. spacer 2.1|172059|33|NZ_CP011314|PILER-CR matches to CP052826 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1245 plasmid pN17S0637, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

165. spacer 2.1|172059|33|NZ_CP011314|PILER-CR matches to NZ_CP016409 (Salmonella enterica subsp. enterica serovar Infantis strain FSIS1502916 plasmid pFSIS1502916, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

166. spacer 2.1|172059|33|NZ_CP011314|PILER-CR matches to NZ_CP016407 (Salmonella enterica subsp. enterica serovar Infantis strain FSIS1502169 plasmid pFSIS1502169, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

167. spacer 2.1|172059|33|NZ_CP011314|PILER-CR matches to NZ_CP016413 (Salmonella enterica subsp. enterica serovar Infantis strain CVM44454 plasmid pCVM44454, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

168. spacer 2.1|172059|33|NZ_CP011314|PILER-CR matches to NZ_CP016411 (Salmonella enterica subsp. enterica serovar Infantis strain N55391 plasmid pN55391, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

169. spacer 2.1|172059|33|NZ_CP011314|PILER-CR matches to CP052814 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S349 plasmid pN17S0349, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

170. spacer 2.1|172059|33|NZ_CP011314|PILER-CR matches to NZ_MG764552 (Klebsiella pneumoniae strain A1763 plasmid pA1763-Ct2, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

171. spacer 2.2|172115|41|NZ_CP011314|PILER-CR matches to NZ_CP053897 (Providencia rettgeri strain YPR31 plasmid pYPR31, complete sequence) position: , mismatch: 2, identity: 0.951

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccaccctc	Protospacer
***************************************..

172. spacer 2.2|172115|41|NZ_CP011314|PILER-CR matches to MN310378 (Klebsiella pneumoniae strain A2293 plasmid pA2293-Ct2, complete sequence) position: , mismatch: 2, identity: 0.951

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctctcccctaaataatccttaaaaaccccatttccacccct	Protospacer
****.*********************.**************

173. spacer 2.2|172115|41|NZ_CP011314|PILER-CR matches to NZ_MH476540 (Klebsiella pneumoniae strain KP1276 plasmid pIA/C-KLUC, complete sequence) position: , mismatch: 2, identity: 0.951

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctctcccctaaataatccttaaaaaccccatttccacccct	Protospacer
****.*********************.**************

174. spacer 2.2|172115|41|NZ_CP011314|PILER-CR matches to NZ_MG764552 (Klebsiella pneumoniae strain A1763 plasmid pA1763-Ct2, complete sequence) position: , mismatch: 2, identity: 0.951

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctctcccctaaataatccttaaaaaccccatttccacccct	Protospacer
****.*********************.**************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

534 : 64122

Escherichia_phage(21.74%)

transposase,protease,holin,integrase

attL 27823:27882|attR 70116:71456

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001567368.1\|534_1938_+\|transposase	ISNCY-like element ISKpn21 family transposase	NA	NA	NA	NA
WP_025368661.1\|2806_3538_+	plasmid SOS inhibition protein A	NA	NA	NA	NA
WP_016947102.1\|3770_4529_+	hypothetical protein	NA	NA	NA	NA
WP_004181725.1\|4594_4984_+	hypothetical protein	NA	NA	NA	NA
WP_124990483.1\|5011_5341_+	hypothetical protein	NA	NA	NA	NA
WP_001100942.1\|5568_6216_+	HAD-IB family hydrolase	NA	NA	NA	NA
WP_023287203.1\|6552_7794_-	hypothetical protein	A0A2D1GNA9	Pseudoalteromonas_phage	4.8e-10	25.1
WP_004026611.1\|7878_8454_-	tellurium resistance cAMP binding protein TerE	K4JRX3	Caulobacter_phage	9.6e-30	42.6
WP_004026609.1\|8540_9119_-	tellurium resistance membrane protein TerD	K4JRX3	Caulobacter_phage	1.9e-33	40.8
WP_004026607.1\|9157_10198_-	tellurium resistance membrane protein TerC	K7QKE8	Escherichia_phage	1.8e-71	46.5
WP_004026604.1\|10221_10677_-	tellurium resistance membrane protein TerB	NA	NA	NA	NA
WP_046654854.1\|10699_11851_-	tellurium resistance system protein TerA	NA	NA	NA	NA
WP_004210240.1\|11847_12432_-	tellurium resistance protein	K4JRX3	Caulobacter_phage	1.8e-12	29.9
WP_046654855.1\|12743_13802_+	carbamoyl-phosphate synthase large chain	NA	NA	NA	NA
WP_032720945.1\|13813_14956_+	adenine/guanine phosphoribosyltransferase	A0A172Q0Y1	Acinetobacter_phage	1.1e-32	27.9
WP_046654856.1\|14948_15722_+	hypothetical protein	NA	NA	NA	NA
WP_004210251.1\|15723_16803_+\|protease	cysteine protease StiP family protein	A0A172Q0S8	Acinetobacter_phage	1.1e-39	33.8
WP_014386544.1\|16802_17759_+	HpcH/HpaI aldolase/citrate lyase family protein	NA	NA	NA	NA
WP_046654857.1\|17769_18993_+	DUF4236 domain-containing protein	NA	NA	NA	NA
WP_004026591.1\|18995_19454_+	CopG family transcriptional regulator	NA	NA	NA	NA
WP_014386542.1\|19933_20572_+	VWA domain-containing protein	NA	NA	NA	NA
WP_000654812.1\|20923_21892_-\|transposase	IS5-like element IS903B family transposase	A0A1B0VFY5	Salmonella_phage	2.1e-186	99.7
WP_029497196.1\|21978_22263_+	hypothetical protein	NA	NA	NA	NA
WP_046654859.1\|22498_22774_-	hypothetical protein	G8C7W1	Escherichia_phage	2.3e-18	56.2
WP_046654860.1\|22776_23406_-	glycoside hydrolase family 19 protein	F1C591	Cronobacter_phage	9.3e-87	74.4
WP_000243811.1\|23405_23687_-\|holin	phage holin family protein	K7PKN9	Enterobacterial_phage	4.8e-19	48.4
WP_001294159.1\|23673_24060_-	membrane protein	A0A192Y8P2	Salmonella_phage	1.6e-57	90.6
WP_001018764.1\|24225_24465_-	hypothetical protein	NA	NA	NA	NA
WP_038806622.1\|24615_25194_-	DUF1133 family protein	A0A0U2S606	Escherichia_phage	4.9e-50	57.2
WP_046654861.1\|25190_25832_-	DNA methyltransferase	I6PDF5	Cronobacter_phage	3.7e-83	68.4
WP_050484678.1\|25828_26473_-	NinG family protein	A0A1W6JNX3	Morganella_phage	1.9e-39	54.3
WP_046654952.1\|26442_27228_-	DNA primase	A0A286N2Q0	Klebsiella_phage	6.6e-82	61.4
27823:27882	attL	NA	NA	NA	NA
WP_000427623.1\|28087_29092_-\|transposase	IS110-like element IS4321 family transposase	NA	NA	NA	NA
WP_123252884.1\|29669_30761_+	DNA-binding transcriptional repressor LacI	C6ZCU4	Enterobacteria_phage	2.8e-187	97.2
WP_046654862.1\|30868_33928_+	beta-galactosidase	L0N6M2	Herpes_simplex_virus	0.0e+00	96.0
WP_046654864.1\|33979_35233_+	lactose permease	NA	NA	NA	NA
WP_003846919.1\|35289_35460_+	hypothetical protein	NA	NA	NA	NA
WP_021553367.1\|37500_38505_+	linear amide C-N hydrolase	NA	NA	NA	NA
WP_021553366.1\|38988_39678_+	D-galactonate utilization transcriptional regulator DgoR	NA	NA	NA	NA
WP_021553365.1\|39674_40553_+	2-dehydro-3-deoxygalactonokinase	NA	NA	NA	NA
WP_021553364.1\|40536_41154_+	2-dehydro-3-deoxy-6-phosphogalactonate aldolase	NA	NA	NA	NA
WP_021553363.1\|41150_42299_+	galactonate dehydratase	Q6A202	Oenococcus_phage	7.2e-53	33.6
WP_021553359.1\|44238_45696_+	DUF560 domain-containing protein	NA	NA	NA	NA
WP_050576801.1\|45880_48649_+	TonB-dependent receptor	NA	NA	NA	NA
WP_053517089.1\|48694_49033_+	hypothetical protein	NA	NA	NA	NA
WP_052455076.1\|49036_49489_+	energy transducer TonB	NA	NA	NA	NA
WP_021553356.1\|50138_50993_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_040209996.1\|51002_51260_+	hypothetical protein	NA	NA	NA	NA
WP_040209999.1\|51256_52567_+	MFS transporter	NA	NA	NA	NA
WP_077257460.1\|52703_53672_+\|transposase	IS5 family transposase	A0A1B0VFY5	Salmonella_phage	3.2e-171	91.0
WP_023328948.1\|54591_54906_+	hypothetical protein	NA	NA	NA	NA
WP_004026565.1\|55149_55602_-	hypothetical protein	NA	NA	NA	NA
WP_001067855.1\|56871_57576_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000240536.1\|58331_59183_+	replication protein	NA	NA	NA	NA
WP_001043265.1\|59490_60306_+	sulfonamide-resistant dihydropteroate synthase Sul2	A0A0B5J4J5	Pandoravirus	3.5e-09	27.6
WP_001082319.1\|60366_61170_+	aminoglycoside O-phosphotransferase APH(3'')-Ib	NA	NA	NA	NA
WP_000480968.1\|61169_62006_+	aminoglycoside O-phosphotransferase APH(6)-Id	NA	NA	NA	NA
WP_001067855.1\|62066_62771_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000935452.1\|62817_64122_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
70116:71456	attR	NA	NA	NA	NA

DBSCAN-SWA_2

68905 : 182935

113

Escherichia_phage(21.95%)

transposase,integrase

attL 84070:84087|attR 176047:176062

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000427623.1\|68905_69910_+\|transposase	IS110-like element IS4321 family transposase	NA	NA	NA	NA
WP_000656305.1\|70220_70598_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_000412211.1\|70798_71458_-	type A-1 chloramphenicol O-acetyltransferase	G3CFL0	Escherichia_phage	8.4e-131	100.0
WP_048268720.1\|72796_74089_-	ABC transporter ATP-binding protein	F2Y2R6	Organic_Lake_phycodnavirus	7.2e-17	30.7
WP_046654869.1\|74076_74550_-	hypothetical protein	NA	NA	NA	NA
WP_131368068.1\|75280_75766_-	hypothetical protein	NA	NA	NA	NA
WP_004176137.1\|77225_78257_+\|transposase	IS630-like element ISEc33 family transposase	NA	NA	NA	NA
WP_046654872.1\|78549_79329_-	TIM barrel protein	NA	NA	NA	NA
WP_046654873.1\|79328_79955_-	aldolase	A0A077SK32	Escherichia_phage	4.9e-96	84.0
WP_046654874.1\|79951_81211_-	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	3.2e-147	64.6
WP_046654956.1\|81743_82505_+	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	1.3e-82	63.5
WP_113772116.1\|82894_84015_-\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	3.3e-50	42.4
84070:84087	attL	NA	NA	NA	NA
WP_162487917.1\|84351_85686_+	MFS transporter	NA	NA	NA	NA
84070:84087	attL	NA	NA	NA	NA
WP_046654877.1\|85703_86681_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_052741626.1\|86852_88829_-	S8 family peptidase	NA	NA	NA	NA
WP_113772117.1\|88922_90070_-\|transposase	IS3 family transposase	U5P429	Shigella_phage	2.3e-144	90.4
WP_046654880.1\|90372_91359_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_023328886.1\|91484_91790_+	hypothetical protein	NA	NA	NA	NA
WP_046654881.1\|93490_96142_+	excinuclease ABC subunit UvrA	A0A1B1IVR3	uncultured_Mediterranean_phage	4.6e-151	34.0
WP_046654959.1\|98321_98921_+	recombinase family protein	NA	NA	NA	NA
WP_046654882.1\|98948_99785_-	S-formylglutathione hydrolase	NA	NA	NA	NA
WP_012561111.1\|99849_100248_-	VOC family protein	NA	NA	NA	NA
WP_046654883.1\|100291_101401_-	S-(hydroxymethyl)glutathione dehydrogenase	E3SJ82	Synechococcus_phage	2.9e-30	28.5
WP_017384071.1\|101435_101711_-	formaldehyde-responsive transcriptional repressor FrmR	NA	NA	NA	NA
WP_077257461.1\|102073_102604_+	hypothetical protein	NA	NA	NA	NA
WP_039390023.1\|103222_103531_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_046654885.1\|103627_104752_-	alkene reductase	NA	NA	NA	NA
WP_046654887.1\|105628_105985_+	hypothetical protein	NA	NA	NA	NA
WP_046654888.1\|106895_108029_-	alcohol dehydrogenase catalytic domain-containing protein	E3SJ82	Synechococcus_phage	7.5e-10	28.6
WP_046654889.1\|108601_109534_-	nucleoside recognition family protein	NA	NA	NA	NA
WP_046654890.1\|109716_110592_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_046654962.1\|110705_111551_+	DMT family transporter	NA	NA	NA	NA
WP_046654891.1\|111626_112463_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_046654892.1\|112757_113417_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_046654893.1\|113458_114343_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_046654894.1\|114571_115552_+	nitronate monooxygenase	NA	NA	NA	NA
WP_046654895.1\|116667_117660_+	zinc-dependent alcohol dehydrogenase family protein	NA	NA	NA	NA
WP_046654896.1\|118122_118539_-	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA
WP_039390198.1\|118535_118766_-	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
WP_071844662.1\|119924_120251_-	four-helix bundle copper-binding protein	NA	NA	NA	NA
WP_052741628.1\|120783_121857_-	zinc-binding dehydrogenase	NA	NA	NA	NA
WP_077254676.1\|121932_122901_-\|transposase	IS5 family transposase	A0A1B0VFY5	Salmonella_phage	3.9e-185	98.8
WP_046654899.1\|124639_124819_-	general stress protein	NA	NA	NA	NA
WP_158423359.1\|125077_125236_+	hypothetical protein	NA	NA	NA	NA
WP_046654900.1\|125846_127943_-	pyrroloquinoline quinone-dependent dehydrogenase	NA	NA	NA	NA
WP_046654901.1\|127953_128319_-	hypothetical protein	NA	NA	NA	NA
WP_046654902.1\|128334_128541_+	hypothetical protein	NA	NA	NA	NA
WP_046654903.1\|128705_129131_-	glutaredoxin-dependent arsenate reductase	A0A2H4J8T1	uncultured_Caudovirales_phage	1.0e-52	72.9
WP_046654904.1\|129143_130433_-	arsenic transporter	A0A2H4J144	uncultured_Caudovirales_phage	6.0e-165	70.2
WP_046654905.1\|130477_130798_-	transcriptional regulator	A0A2H4J145	uncultured_Caudovirales_phage	1.7e-20	46.7
WP_046654906.1\|130883_131582_+	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	6.5e-89	68.1
WP_046654907.1\|131676_132093_-	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA
WP_046654908.1\|132089_132320_-	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
WP_046654909.1\|132865_133168_+	hypothetical protein	NA	NA	NA	NA
WP_110247212.1\|133246_134056_+	hypothetical protein	NA	NA	NA	NA
WP_046654911.1\|134055_134832_+\|integrase	phage integrase family protein	I3WFA4	Macacine_betaherpesvirus	1.0e-50	89.3
WP_046654912.1\|135269_136610_-\|transposase	ISNCY family transposase	NA	NA	NA	NA
135014:135031	attR	NA	NA	NA	NA
WP_004026352.1\|137408_137669_+	hypothetical protein	NA	NA	NA	NA
135014:135031	attR	NA	NA	NA	NA
WP_004026354.1\|137777_138248_-	RES family NAD+ phosphorylase	NA	NA	NA	NA
WP_004026357.1\|138244_138688_-	DUF2384 domain-containing protein	NA	NA	NA	NA
WP_004181894.1\|138787_140059_-	translesion error-prone DNA polymerase V subunit UmuC	F1C5A5	Cronobacter_phage	3.9e-140	58.3
WP_004181893.1\|140058_140481_-	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	6.3e-31	49.3
WP_004181891.1\|142689_143481_-	hypothetical protein	NA	NA	NA	NA
WP_004181864.1\|143725_144433_-	hypothetical protein	NA	NA	NA	NA
WP_004883274.1\|144426_146301_-	DEAD/DEAH box helicase	A0A127AW80	Bacillus_phage	5.2e-08	27.1
WP_004197662.1\|146303_146870_-	type I-E CRISPR-associated protein Cas6/Cse3/CasE	NA	NA	NA	NA
WP_004197663.1\|146872_147664_-	hypothetical protein	NA	NA	NA	NA
WP_004883268.1\|147726_148140_-	hypothetical protein	NA	NA	NA	NA
WP_046654913.1\|148223_148712_-	hypothetical protein	NA	NA	NA	NA
WP_016947074.1\|148763_149174_-	hypothetical protein	NA	NA	NA	NA
WP_004883249.1\|149203_149611_-	hypothetical protein	NA	NA	NA	NA
WP_004883245.1\|149620_150016_-	hypothetical protein	NA	NA	NA	NA
WP_004883242.1\|150463_151705_-	hypothetical protein	A0A2P9HXK7	Yersinia_phage	6.7e-12	28.9
WP_046654914.1\|152588_153035_-	DUF957 domain-containing protein	NA	NA	NA	NA
WP_032719463.1\|153328_153937_-	hypothetical protein	K4JV11	Caulobacter_phage	4.4e-25	41.0
WP_046654915.1\|154006_154456_-	hypothetical protein	A0A1I9KFG8	Aeromonas_phage	2.3e-18	40.0
WP_004197222.1\|154907_155675_-	DUF550 domain-containing protein	S4TSR6	Salmonella_phage	3.5e-43	62.7
WP_004197199.1\|155738_156263_-	hypothetical protein	NA	NA	NA	NA
WP_001029679.1\|156747_157569_+\|transposase	heteromeric transposase endonuclease subunit TnsA	NA	NA	NA	NA
WP_000267723.1\|157555_159664_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_000019473.1\|161059_162040_-\|transposase	IS5-like element ISKpn26 family transposase	Q38213	Escherichia_phage	8.9e-185	99.1
WP_001243518.1\|162530_164057_+\|transposase	transposase	NA	NA	NA	NA
WP_000251879.1\|164057_165674_+\|transposase	transposase	NA	NA	NA	NA
WP_001271300.1\|165904_166282_-	hypothetical protein	NA	NA	NA	NA
WP_000119696.1\|166691_167063_-	hypothetical protein	NA	NA	NA	NA
WP_001444089.1\|167123_167621_-	hypothetical protein	NA	NA	NA	NA
WP_000704156.1\|167689_168214_-	streptothricin N-acetyltransferase Sat2	NA	NA	NA	NA
WP_000777554.1\|168308_168782_-	trimethoprim-resistant dihydrofolate reductase DfrA1	G3MBI7	Bacillus_virus	3.7e-19	32.1
WP_004176137.1\|169170_170202_+\|transposase	IS630-like element ISEc33 family transposase	NA	NA	NA	NA
WP_000071896.1\|170268_170805_+\|integrase	class 2 integron integrase IntI2	A0A1P8DJJ6	Virus_Rctr41k	6.9e-14	34.4
WP_000497519.1\|170919_171246_+\|integrase	tyrosine-type recombinase/integrase	A0A1P8DJJ6	Virus_Rctr41k	2.1e-18	52.0
WP_001353740.1\|171433_171673_-	DUF1819 family protein	NA	NA	NA	NA
WP_046654917.1\|172291_172579_-	hypothetical protein	NA	NA	NA	NA
WP_162487916.1\|172634_172796_-	hypothetical protein	NA	NA	NA	NA
WP_004197207.1\|172859_173132_-	hypothetical protein	I7B2L9	Escherichia_phage	1.5e-12	48.9
WP_004197220.1\|173215_173422_-	hypothetical protein	NA	NA	NA	NA
WP_046654918.1\|173723_173918_-	hypothetical protein	NA	NA	NA	NA
WP_046654966.1\|173920_174517_-	DUF551 domain-containing protein	A0A0S1S1U7	Klebsiella_phage	2.4e-20	94.1
WP_016947068.1\|174600_175083_-	hypothetical protein	A0A077SLK5	Escherichia_phage	4.4e-12	58.3
WP_158423360.1\|175420_175756_-	hypothetical protein	J9Q804	Salmonella_phage	5.6e-14	51.4
WP_004141386.1\|176283_176496_-	hypothetical protein	A0A0F6TJE4	Escherichia_coli_O157_typing_phage	8.1e-11	45.5
WP_032719523.1\|176902_177418_-	DUF262 domain-containing protein	A0A2H4FWH2	Salmonella_phage	3.7e-65	68.2
WP_052741629.1\|177448_177952_-	hypothetical protein	A0A1V0E5L6	Salmonella_phage	2.8e-25	66.2
WP_046654920.1\|177998_178214_-	hypothetical protein	NA	NA	NA	NA
WP_024198083.1\|178540_178927_-	hypothetical protein	H6WRY2	Salmonella_phage	3.7e-17	85.1
WP_046654921.1\|179342_179987_-	hypothetical protein	A0A125RNQ8	Pseudomonas_phage	5.4e-05	51.6
WP_042919262.1\|179983_180211_-	hypothetical protein	A9YWV3	Burkholderia_phage	2.5e-10	48.1
WP_004026413.1\|180688_180877_-	hypothetical protein	NA	NA	NA	NA
WP_040209848.1\|180873_181371_-	hypothetical protein	A0A2I6TCG8	Escherichia_phage	2.0e-23	67.1
WP_004026415.1\|181463_181682_-	hypothetical protein	R9TRD3	Aeromonas_phage	4.4e-20	66.7
WP_004197205.1\|181847_182099_-	hypothetical protein	S5MQM0	Escherichia_phage	1.9e-22	76.7
WP_004026416.1\|182219_182534_-	hypothetical protein	NA	NA	NA	NA
WP_004026417.1\|182614_182935_-	hypothetical protein	J9Q750	Salmonella_phage	2.2e-28	50.9

DBSCAN-SWA_3

206762 : 213954

Burkholderia_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004883140.1\|206762_207965_+	type II restriction endonuclease	E5E3X4	Burkholderia_phage	1.8e-33	37.7
WP_004883137.1\|208054_209470_-	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	3.1e-106	50.9
WP_004026464.1\|209596_210340_-	DNA replication protein DnaC	V5UQI5	Shigella_phage	1.8e-60	49.6
WP_004196690.1\|210336_210771_-	hypothetical protein	NA	NA	NA	NA
WP_004026466.1\|210803_211064_-	hypothetical protein	A0A0M3LSW2	Mannheimia_phage	5.9e-11	41.0
WP_004026468.1\|211317_211761_-	hypothetical protein	NA	NA	NA	NA
WP_004196726.1\|211991_212351_+	hypothetical protein	NA	NA	NA	NA
WP_040120493.1\|212535_212946_-	hypothetical protein	Q71TH9	Escherichia_phage	4.6e-42	60.8
WP_004181824.1\|213070_213385_+	hypothetical protein	NA	NA	NA	NA
WP_004196710.1\|213375_213954_-	HNH endonuclease	W0LI46	Edwardsiella_phage	1.2e-40	57.6

DBSCAN-SWA_4

264386 : 315922

Enterobacteria_phage(25.0%)

transposase,integrase

attL 269824:269839|attR 301006:301021

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_025368604.1\|264386_265613_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	O80301	Enterobacteria_phage	6.2e-143	76.6
WP_040120489.1\|265649_266075_+\|transposase	IS200/IS605 family transposase	I4AZM1	Saccharomonospora_phage	1.8e-33	51.5
WP_042935575.1\|266360_267587_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	O80301	Enterobacteria_phage	1.7e-156	79.3
WP_004181778.1\|267816_268101_-	type II toxin-antitoxin system RelE/ParE family toxin	A0A2H4JBF4	uncultured_Caudovirales_phage	4.7e-22	59.1
WP_025368601.1\|268090_268339_-	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA
WP_042935572.1\|268629_270429_+	ATP-dependent helicase	E3T5J8	Cafeteria_roenbergensis_virus	3.3e-28	25.6
269824:269839	attL	NA	NA	NA	NA
WP_046654939.1\|270762_271758_+	hypothetical protein	NA	NA	NA	NA
WP_004181774.1\|271902_272256_+	hypothetical protein	NA	NA	NA	NA
WP_046654940.1\|272317_273139_+	hypothetical protein	NA	NA	NA	NA
WP_004186944.1\|273166_274219_+	AAA domain-containing protein	NA	NA	NA	NA
WP_004026538.1\|274312_275389_+	DUF3150 domain-containing protein	NA	NA	NA	NA
WP_071844669.1\|276703_277480_+	VWA domain-containing protein	NA	NA	NA	NA
WP_004181768.1\|277551_277782_+	hypothetical protein	NA	NA	NA	NA
WP_046654942.1\|277892_279137_+	topoisomerase	A0A0H5AWB1	Pseudomonas_phage	1.4e-09	25.5
WP_004181766.1\|279205_279745_+	hypothetical protein	NA	NA	NA	NA
WP_004181765.1\|279889_280108_+	hypothetical protein	NA	NA	NA	NA
WP_004026547.1\|280695_280938_+	hypothetical protein	NA	NA	NA	NA
WP_004181762.1\|280985_281450_+	hypothetical protein	NA	NA	NA	NA
WP_024198103.1\|281459_281867_+	hypothetical protein	NA	NA	NA	NA
WP_042934803.1\|281909_282869_+	DNA replication protein	NA	NA	NA	NA
WP_042934801.1\|282865_283624_+	hypothetical protein	NA	NA	NA	NA
WP_042934798.1\|283620_283944_+	hypothetical protein	NA	NA	NA	NA
WP_042934796.1\|284094_284412_+	hypothetical protein	NA	NA	NA	NA
WP_014386529.1\|284477_285614_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_021529705.1\|287553_290559_-\|transposase	Tn3-like element Tn3 family transposase	Q1MVP5	Enterobacteria_phage	0.0e+00	99.9
WP_001235713.1\|290722_291280_+	recombinase family protein	Q1MVP4	Enterobacteria_phage	7.0e-94	100.0
WP_000027057.1\|291462_292323_+	class A broad-spectrum beta-lactamase TEM-1	Q1MVP3	Enterobacteria_phage	4.6e-161	100.0
WP_000557452.1\|292464_293325_+	aminoglycoside N-acetyltransferase AAC(3)-IIa	NA	NA	NA	NA
WP_000587836.1\|293337_293631_+	hypothetical protein	NA	NA	NA	NA
WP_085956516.1\|293662_294821_+\|transposase	IS3-like element ISKpn11 family transposase	A0A2P1JR32	Mycobacterium_phage	1.5e-18	32.3
WP_004197549.1\|294887_295073_-	hypothetical protein	NA	NA	NA	NA
WP_085947932.1\|295964_296725_-\|transposase	IS5-like element ISKpn12 family transposase	A0A0N9SJT9	Paenibacillus_phage	2.0e-11	38.8
WP_004197545.1\|296849_297122_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_113772118.1\|297217_297502_+	hypothetical protein	A0A1W6JNS2	Morganella_phage	7.1e-10	47.0
WP_000019473.1\|297547_298528_+\|transposase	IS5-like element ISKpn26 family transposase	Q38213	Escherichia_phage	8.9e-185	99.1
WP_148552480.1\|298585_298846_+	hypothetical protein	NA	NA	NA	NA
WP_046654943.1\|300724_301528_+	hypothetical protein	NA	NA	NA	NA
301006:301021	attR	NA	NA	NA	NA
WP_156652358.1\|301691_302768_-	hypothetical protein	NA	NA	NA	NA
WP_004186900.1\|302928_303813_-	hypothetical protein	J9Q7H0	Salmonella_phage	2.6e-50	43.2
WP_001067855.1\|303924_304629_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_113772119.1\|304605_304971_+	hypothetical protein	A0A1B0VDR3	Salmonella_phage	3.8e-40	100.0
WP_000239590.1\|305226_306102_+	class A extended-spectrum beta-lactamase CTX-M-15	A0A1B0VBP7	Salmonella_phage	1.1e-125	82.4
WP_001393253.1\|306148_306481_-	cupin fold metalloprotein, WbuC family	NA	NA	NA	NA
WP_001067855.1\|308802_309507_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_002063889.1\|310700_311243_-	AAA family ATPase	NA	NA	NA	NA
WP_000557452.1\|311255_312116_-	aminoglycoside N-acetyltransferase AAC(3)-IIa	NA	NA	NA	NA
WP_001067855.1\|312222_312927_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_001334766.1\|313558_314389_-	oxacillin-hydrolyzing class D beta-lactamase OXA-1	NA	NA	NA	NA
WP_063840321.1\|314519_315074_-	fluoroquinolone-acetylating aminoglycoside 6'-N-acetyltransferase AAC(6')-Ib-cr5	NA	NA	NA	NA
WP_001067855.1\|315217_315922_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP011313

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP011313_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011313_1

1186897-1187005

Orphan

Consensus_repeat	Method
TGTCCCACCCTGTACCACTTTTTTTAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP011313_1

>merge|NZ_CP011313|1|1186897-1187005|CRISPRCasFinder
TGTCCCACCCTGTACCACTTTTTTTAAACCAAATTCTGTAATGTGGGACGCTGAAACCCGCGCCAGCTCTGCGTGTACCACTTGTCCCACCCTGTACCACCTTTTTTTA

>NZ_CP011313|1|1|1186897-1187005|CRISPRCasFinder
TGTCCCACCCTGTACCACTTTTTTTAA	ACCAAATTCTGTAATGTGGGACGCTGAAACCCGCGCCAGCTCTGCGTGTACCACT
TGTCCCACCCTGTACCACCTTTTTTTA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011313.1\|WP_032418453.1\|1185969_1186254_-\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|372675
NZ_CP011313.1\|WP_087757875.1\|1186348_1186705_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP011313.1\|WP_071549035.1\|1196978_1197455_+\|type-II-toxin-antitoxin-system-RatA-family-toxin	unknown	unknown	gnl\|CDD\|182678
NZ_CP011313.1\|WP_032418456.1\|1187023_1189093_-\|DUF927-domain-containing-protein	unknown	unknown	gnl\|CDD\|227806
NZ_CP011313.1\|WP_046653552.1\|1182963_1183977_-\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NZ_CP011313.1\|WP_004174799.1\|1198290_1199952_-\|DNA-repair-protein-RecN	unknown	unknown	gnl\|CDD\|236781
NZ_CP011313.1\|WP_004145682.1\|1197444_1197735_+\|RnfH-family-protein	unknown	unknown	gnl\|CDD\|234982
NZ_CP011313.1\|WP_071844617.1\|1182316_1182523_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011313.1\|WP_032418458.1\|1189128_1189344_-\|AlpA-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225848
NZ_CP011313.1\|WP_032418449.1\|1184964_1185339_-\|PTS-glucitol/sorbitol-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|226254
NZ_CP011313.1\|WP_032418444.1\|1180850_1181300_-\|phage-virion-morphogenesis-protein	unknown	unknown	gnl\|CDD\|368274
NZ_CP011313.1\|WP_123836165.1\|1180283_1180829_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011313.1\|WP_032418451.1\|1185335_1185857_-\|PTS-sorbitol-transporter-subunit-IIC	unknown	unknown	gnl\|CDD\|226253
NZ_CP011313.1\|WP_032418448.1\|1183987_1184968_-\|PTS-glucitol/sorbitol-transporter-subunit-IIB	unknown	unknown	gnl\|CDD\|226255
NZ_CP011313.1\|WP_002914160.1\|1197801_1198143_-\|outer-membrane-protein-assembly-factor-BamE	unknown	unknown	gnl\|CDD\|183190
NZ_CP011313.1\|WP_032418445.1\|1181673_1181832_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011313.1\|WP_004145681.1\|1198124_1198265_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011313.1\|WP_002914164.1\|1196385_1196868_-\|SsrA-binding-protein-SmpB	unknown	unknown	gnl\|CDD\|235455
NZ_CP011313.1\|WP_032418460.1\|1193816_1194464_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011313.1\|WP_032418459.1\|1189824_1193628_-\|DNA-binding-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP011313.1\|WP_032418453.1\|1185969_1186254_-\|transcriptional-regulator	gnl\|CDD\|372675	pfam13693, HTH_35, Winged helix-turn-helix DNA-binding.	1.06433e-37
NZ_CP011313.1\|WP_087757875.1\|1186348_1186705_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	1.98259e-09
NZ_CP011313.1\|WP_032418456.1\|1187023_1189093_-\|DUF927-domain-containing-protein	gnl\|CDD\|227806	COG5519, COG5519, Superfamily II helicase and inactivated derivatives [DNA replication, recombination, and repair].	0
NZ_CP011313.1\|WP_046653552.1\|1182963_1183977_-\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	8.07959e-65
NZ_CP011313.1\|WP_004145682.1\|1197444_1197735_+\|RnfH-family-protein	gnl\|CDD\|234982	PRK01777, PRK01777, RnfH family protein.	7.65271e-47
NZ_CP011313.1\|WP_002914160.1\|1197801_1198143_-\|outer-membrane-protein-assembly-factor-BamE	gnl\|CDD\|183190	PRK11548, PRK11548, outer membrane protein assembly factor BamE.	5.2573e-82
NZ_CP011313.1\|WP_032418458.1\|1189128_1189344_-\|AlpA-family-transcriptional-regulator	gnl\|CDD\|225848	COG3311, AlpA, Predicted transcriptional regulator [Transcription].	5.83127e-21
NZ_CP011313.1\|WP_071549035.1\|1196978_1197455_+\|type-II-toxin-antitoxin-system-RatA-family-toxin	gnl\|CDD\|182678	PRK10724, PRK10724, type II toxin-antitoxin system RatA family toxin.	3.17506e-105
NZ_CP011313.1\|WP_032418444.1\|1180850_1181300_-\|phage-virion-morphogenesis-protein	gnl\|CDD\|368274	pfam05069, Phage_tail_S, Phage virion morphogenesis family. Protein S of phage P2 is thought to be involved in tail completion and stable head joining.	6.12186e-39
NZ_CP011313.1\|WP_032418451.1\|1185335_1185857_-\|PTS-sorbitol-transporter-subunit-IIC	gnl\|CDD\|226253	COG3730, SrlA, Phosphotransferase system sorbitol-specific component IIC [Carbohydrate transport and metabolism].	6.94718e-79
NZ_CP011313.1\|WP_032418448.1\|1183987_1184968_-\|PTS-glucitol/sorbitol-transporter-subunit-IIB	gnl\|CDD\|226255	COG3732, SrlE, Phosphotransferase system sorbitol-specific component IIBC [Carbohydrate transport and metabolism].	1.71362e-173
NZ_CP011313.1\|WP_004174799.1\|1198290_1199952_-\|DNA-repair-protein-RecN	gnl\|CDD\|236781	PRK10869, PRK10869, recombination and repair protein; Provisional.	0
NZ_CP011313.1\|WP_002914164.1\|1196385_1196868_-\|SsrA-binding-protein-SmpB	gnl\|CDD\|235455	PRK05422, smpB, SsrA-binding protein SmpB.	5.43734e-87
NZ_CP011313.1\|WP_032418449.1\|1184964_1185339_-\|PTS-glucitol/sorbitol-transporter-subunit-IIA	gnl\|CDD\|226254	COG3731, SrlB, Phosphotransferase system sorbitol-specific component IIA [Carbohydrate transport and metabolism].	3.73192e-58

>NZ_CP011313.1|WP_087757875.1|1186348_1186705_+|helix-turn-helix-transcriptional-regulator
MPEDGCCPERDNSCIFRCRVAIVIGKRLKISRVRADLTQAELGVLAGLDEESASARISSYEKEVHAPDFKLVCKLAAALDVPEAYFYAVDDELAELILQYHRFKKNNPGRTLLFSPNP
>NZ_CP011313.1|WP_032418453.1|1185969_1186254_-|transcriptional-regulator
MKKSTTKDWHPADIIAALHKRGTSLAKLSREAGLASSTLSNTLTRAWPKGEWLIAIALDVHPSEIWPGRYLNSSNKREPRKPLHPMTTTDNSGT
>NZ_CP011313.1|WP_032418451.1|1185335_1185857_-|PTS-sorbitol-transporter-subunit-IIC
MFLVSLAEGFIHLFQAAGKIFLDMMTGLIPMLICLLLAINFLMKLVGTIRMEKVAALLGRSRILTYGVLPVLGWFFMSSPGALTLGKLLPEKSKPGYEDALGTTAHPLTSLFPHVVPSELFVWLGVAAGVKALGLPVTSLALRYIAAAMLIGLIRGIITEYLFLRLSKRGNVP
>NZ_CP011313.1|WP_032418449.1|1184964_1185339_-|PTS-glucitol/sorbitol-transporter-subunit-IIA
MMIYCARITAIGLFVADGLTDKMLITFDSNGPKDCLDYSLSLEPSFREESLMILPGDRLMLAGHDYLVTAVGKGAQQALFELGHLTLVFNGDLNPCHTGTVHLSGPVPNLRDLHGNLVIEEGRP
>NZ_CP011313.1|WP_032418448.1|1183987_1184968_-|PTS-glucitol/sorbitol-transporter-subunit-IIB
MNTVLIPPGPGGYGKGLWLPVASGKKVLSLTGREIHPVAIEIGALTESEIVNGFSDIPPDNDILCVVINCAGSLRCGLYPQKGIPTINVLPTWRAGPLAHFITEENYVSDVTMEQLVLVDTAEAPDSEPEITPEPALRVITTPPPPRGAEKLVRMVEQTGTAVGHVIALLFAASREAVDVSLRNVIPFMAFVSLLIALVQETALGSLIAHAMTPLANSLWGLVLLSLICGIPFLSPVLGPGAAISQVIGVMIGTQIGAGAISPAFALPALFAINVQVGCDFVPVGLSMQEAKPETIAKGVPAFLLSRQLTGPLAVIIGWLFSLGLF
>NZ_CP011313.1|WP_046653552.1|1182963_1183977_-|Gfo/Idh/MocA-family-oxidoreductase
MNKIRAAVVGAGIYGKHHMNTYRHNPDTVLVAICDTDTERCDDLAMAYGVIGYTRLDVLLQEEAIDVVSVATPDPYHTESILTALRHGKHVLAEKPLATSVRECELIVEMAQQRDLLVGVDFHKRWDLAVMRIKAELEKPEAGRILRGHISMDDVISVPTEWLNWAGASSPVWFLGSHCFDLVRHLSGQEVVSVYAVGQKRLMVECGLDTFDSVQSLLTMADGSSWVVENSWVLPEGFPKDNDGRIDILCEATYIRSTSQHRGLEITTPGMTLTPNSYFINYRNGIASGFGIDPINDFVRAVRNRSPYPVTAVDGLAVSRICEAVHRSLKSGKPEKI
>NZ_CP011313.1|WP_071844617.1|1182316_1182523_-|hypothetical-protein
MESEHEAINIALTIENGVVTNVRQIRKDEHIASLETFLWIVKRAGYEVVPPQESTQDPENIKVLAEVE
>NZ_CP011313.1|WP_032418445.1|1181673_1181832_-|hypothetical-protein
MPGSDPTTNGDLSADIRQLVSALEGCALQVRTVKNCQDKIDVQAKESAKSLN
>NZ_CP011313.1|WP_032418444.1|1180850_1181300_-|phage-virion-morphogenesis-protein
MNDFKPFDDKLAGLIAALSPTARRKMAADIAKPLRARQQRRIKTQKAPDGTPYAARKRQPVKAKKDRVKREMFAKLRISRFMKATAGNDVAVVEFTGKVQRMVNVHQYGLKDKPSPNSGSVEYPARILLGFSPSDIDFASTKIVNYLSE
>NZ_CP011313.1|WP_123836165.1|1180283_1180829_-|hypothetical-protein
MRKLSKGNEGAIDKKIELMIKVIIRTDSYLNSANTKSTILLSLSSALLVALSVNFKNITGMVIVDSDKAVLAVLISLMIFLLITSIVFSLRGITPYIKPSTVSNTFSFVDISINFHELHLYKERFNSVSKLEYLNELISLNHNLSKALVAKYNKQITAITCIEATAYVLCFSVYMIIIANC
>NZ_CP011313.1|WP_032418456.1|1187023_1189093_-|DUF927-domain-containing-protein
MKRAPFLCKQSPDRTLEVVILAGSLAWETSRIWRKDPEREDDVPPVVLGPDELADLDNLTIIRPDTLYVRVLRTGDIREEELLKIAVKLAHAGVQMARLMSPDGELLEDWSGQLARLRQERPSDILPDHFRLDEEALWFDKLTERRDGESDVQPQRICSPLRVTAITCDSHDDSYGRLLEWHTTTGQLRRWAMPMAMLSGNGEELRRILLENGLTYISTRPALRSLLCEYISRSLPGRRVTCVEKTGWHNGVYVLPDEVIGPGGDNIILQGSHYLTGGFAQAGTLAEWQGQVAALCAGNSRLVFAVCCALAAPLLRLTGTGGGGFHLRGESTDGKTTVMKVAASVCGGTDYWHSWRATGNALEGIASRHNDALLPLDELREVDPREAGMIAYMLANGQGKGRARTDGEVRNRRHWTLLLFSTGELSLAEHTERAGERLYAGMDVRMVQIPSDTGNHGAFEQLHGFASGQQFADTLCDRVARFHGTAFRAWLAFLTHDQDASTTLARELLRRYQTALMPENAGNQVQRIVARFALLAVAGEMATLQGITGWQEGTAYGAVQICLHAWLNERGHIANQEDEGVLAQIKRFITAHQYSRFASWDGPDRPLNMVGFRRVEKDPLTGEEYTLFHILPEGWREMCRGFSPARAARLCLEAECLLPGSDGKYQSQVRLPEIGKARVYRLTSRILSI
>NZ_CP011313.1|WP_032418458.1|1189128_1189344_-|AlpA-family-transcriptional-regulator
MKTRADNNDAFPESGNVRMRQVVQFLAMSESSVYRLIKDTDFPRPVHLSSRLVVFDAAEIRQWQQRRAAIR
>NZ_CP011313.1|WP_032418459.1|1189824_1193628_-|DNA-binding-protein
MALLDKIKSLISANETATQNIEEESVYDTLTPKIITDSSVKHYFDALDFAFSKQDVKNIAITGPYGAGKSTVIQSYLKTHLNREFINVSLADFSLSGKSDEAPLENSEIELSILQQILYKENKDNLPDSRIDRIQNRNKKHISSLFLTVLSVVAPLLLLAITIFPKYFFSLFGATEPTINVIVNMFPERFFVSIIMGLLCLFFIVRVASKAGIFDKKIKLSKIAFLQGSADMASQESSSLLNNCLDEIVYFFSRSQYKIVVFEDLDRLGNAEVFVKLREINQIVNNNLQSEPVRFIYACRDDIFLGADIRTKFFDFILPVIPVMDARNAYTHLKNKLYDFPENEQPLLKQMSLYISDMRSLQNIVNEFNLFKKVVDDNTNQAKIFALIFYKNIYAQDYNLTDKKSGVLYSFIHNYRLRKLHENHFKLLDQRLEELNNKLVKIRKESVSTDAELRKQIISRFISPELWPIVYFIKDTGNYHQRYIKFSAESFYNSEHEFINYFEQNSSLYIGYPFNGNQHQLAKIDSTSIIEEYKQRNILISSNRDDAYKKTTKEIEELKENIRTRNAISLANLLKIIGWENFRTIAEEYIATCDDRTIIDPEQLETIRNGFRFGGFEALYYLLTNGYIMQDFMMFRSIFNQGTISANDNDYIKAVGRYIGCEEANQTFLLDNSKDVLAELVGQHYQYREGALHHQIIAFLLDSQDNQDHKTLSAMIAMIFRQPASVIIAIFKILEDRFINVDYFTRLVVSSLSENKYLDKMISVLKEQEHNAISKSIASKMIALVSPDISTDQKNYQKFIEDLGFSLVSEVEPNNLQYFLHNIEQLQVIYHDIYLPVTPNEMKALNFIGDHQMYPLDRATYRVVVAGLLQSDNVTCEMVDDLPWSLLDKHQLSKIKVYVNDNINIFVKDIFIDSKESSNAIVSVITHSDLSDELKILILEKMQFTVTGLNEFPEYIDVDGNELSYHDLFYRYDHVTPGWEALLAYICEECNLEILTQYIENYADVLSQEAINLMEGDRYDLLYMKVICNDNLSDSAYAAILEPVYINTHHWDERMSLKNLYRLIKNRKIELDPETFKQAIQYFISNNDLKRIEPFVLWFSQFKDNFFPNIEYYLCVNQDDVFFKESLIGINNSHVFTLQEKSSILFKCREHYELSLFEELTISNEGLIALVNTSTDDNFTIYVIIKLLKNGYRSRTEIAHFVSRLEEKEYTKIFYQKSATLNLDKPQEAELFLSALQQANLIKKWTLRDVGKYYVQCRYEEDESYLD
>NZ_CP011313.1|WP_032418460.1|1193816_1194464_-|hypothetical-protein
MTSPIRQNLFERECDMPLLEARHLALLLLGLDASQPANALPEEHQENYRILHDAISRTIKATGMVSAPANKRMFYADEMFALAWRLIDDELTPPEIKARSLKAVMKLSRNSRGRKWLKTLGDDALPDLTTSAQPSQRGMHKRDKARENTARLCWLLVQLLVEETDGRYGTSDKPASDRILRKLRALAQERELPSDGLGRGTFYEVLKMGRERKYR
>NZ_CP011313.1|WP_002914164.1|1196385_1196868_-|SsrA-binding-protein-SmpB
MTKKKAHKPGSATIALNKRARHEYFIEDEYEAGLALQGWEVKSLRAGKANIGDSYVILKDGEAFLFGANFTPMAVASTHYVCDPTRTRKLLLNQRELDTLYGRINREGYTVVALSLYWKNAWCKVKIGVAKGKKQHDKRTDLKDREWALDKARIMKHAGR
>NZ_CP011313.1|WP_071549035.1|1196978_1197455_+|type-II-toxin-antitoxin-system-RatA-family-toxin
MILFALCLNVEPAMPQISRTALVPFSAEQMYQLVNDVKSYPDFLPGCTGSRVLEFGPTQMTAAVDVSKAGISKTFTTRNTLTSNQSILMSLVDGPFKKLIGGWKFIPLSPEACKIEFHLDFEFTNKLIEMAFGRVFKELAANMVQAFTSRAKEVYSAS
>NZ_CP011313.1|WP_004145682.1|1197444_1197735_+|RnfH-family-protein
MPANIRVEVAYALPEKQYLQRVTLDEGATVEQAIIASGLLALRDDIDLAKNKLGIYSRPVKLHDEVHDGDRVEIYRPLIADPKELRRQRAEKSAAK
>NZ_CP011313.1|WP_002914160.1|1197801_1198143_-|outer-membrane-protein-assembly-factor-BamE
MRCKTLTAAAAVLLMLTAGCSTLERVVYRPDINQGNYLAPNDVAKIRVGMTQQQVAYALGTPMMTDPFGTNTWFYVFRQEPGHQKVTQQTLTLTFNSGGVLTNIDNKPALTSQ
>NZ_CP011313.1|WP_004145681.1|1198124_1198265_-|hypothetical-protein
MNSKLPADLQPEVSNGAKVYYYRHITDEPRTARAQKGIKSLCAVKR
>NZ_CP011313.1|WP_004174799.1|1198290_1199952_-|DNA-repair-protein-RecN
MLAQLTISNFAIVRELEIDFHSGMTAITGETGAGKSIAIDALGLCLGGRAEADMVRRGATRADLCARFALKDTPAAQRWLEENQLESGRECLLRRVISADGRSRGFINGTAVPLSQLRELGQLLIQIHGQHAHQLLTKPEHQKTLLDGYTGEYALTQRMAEHYRQWHQSCRELAQHQQQSQERAARADLLQYQLKELNEFNPLPGEFEQIDEEYKRLANSGQLLSTCQHALTVLADGEEANLQSQLYTAKQLVSELVGMDSKLSGVLDMLEEAAIQLSEASDELRHYHDRLDLDPNRLFELEQRISRQIALARKHQVMPEELPAVYQAMLEEQRLLDDSAGSLESLSQQVVEHHQLALETARQLHALRQASADELTQLITESMHSLSMPHGVFAIEVAFDERHLTADGADHIEFRVTTNPGQPLQPIAKVASGGELSRIALAIQVITARKMETPALIFDEVDVGISGPTAAVVGKLLRQLGESTQVMCVTHLPQVAGCGHHHFFVCKETDGEMTETHMQPLDKRARLQELARLLGGSEVTRNTLANAKELLAA

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Click the colored protein region to show detailed information

Crispr_ID: NZ_CP011313_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011313_2

2044964-2045065

Orphan

Consensus_repeat	Method
TGTAGCCTCGCTAAGCGAAGCGCGAGCGATGAGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP011313_2

>merge|NZ_CP011313|2|2044964-2045065|CRISPRCasFinder
TGTAGCCTCGCTAAGCGAAGCGCGAGCGATGAGACAGCAGAACAGGTGGCTGAGAGAGTGCAGGAATGTGTAGCCTCGCTAAGCGAAGCGCGAGCGAGGAGA

>NZ_CP011313|2|2|2044964-2045065|CRISPRCasFinder
TGTAGCCTCGCTAAGCGAAGCGCGAGCGATGAGA	CAGCAGAACAGGTGGCTGAGAGAGTGCAGGAATG
TGTAGCCTCGCTAAGCGAAGCGCGAGCGAGGAGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011313.1\|WP_002910108.1\|2047622_2048525_+\|patatin-like-phospholipase-RssA	unknown	unknown	gnl\|CDD\|182352
NZ_CP011313.1\|WP_002910105.1\|2049825_2050728_+\|UTP--glucose-1-phosphate-uridylyltransferase-GalU	unknown	unknown	gnl\|CDD\|184021
NZ_CP011313.1\|WP_004151854.1\|2046166_2047009_-\|formyltetrahydrofolate-deformylase	unknown	unknown	gnl\|CDD\|235676
NZ_CP011313.1\|WP_072093171.1\|2047051_2047522_-\|YchJ-family-protein	unknown	unknown	gnl\|CDD\|234966
NZ_CP011313.1\|WP_032103886.1\|2055336_2055522_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011313.1\|WP_046653762.1\|2032922_2034701_-\|nitrate/nitrite-two-component-system-sensor-histidine-kinase-NarX	unknown	unknown	gnl\|CDD\|182581
NZ_CP011313.1\|WP_002910191.1\|2042078_2042789_+\|nitrate-reductase-molybdenum-cofactor-assembly-chaperone	unknown	unknown	gnl\|CDD\|185014
NZ_CP011313.1\|WP_002910097.1\|2052583_2055259_-\|bifunctional-acetaldehyde-CoA/alcohol-dehydrogenase	unknown	unknown	gnl\|CDD\|237515
NZ_CP011313.1\|WP_002910193.1\|2040546_2042082_+\|nitrate-reductase-subunit-beta	unknown	unknown	gnl\|CDD\|224063
NZ_CP011313.1\|WP_002910107.1\|2048614_2049628_+\|two-component-system-response-regulator-RssB	unknown	unknown	gnl\|CDD\|182652
NZ_CP011313.1\|WP_004189450.1\|2043462_2044359_-\|DMT-family-transporter	unknown	unknown	gnl\|CDD\|273359
NZ_CP011313.1\|WP_004152249.1\|2044466_2044910_+\|Lrp/AsnC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224439
NZ_CP011313.1\|WP_004145401.1\|2051679_2051811_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011313.1\|WP_002910100.1\|2051818_2052436_+\|thymidine-kinase	unknown	unknown	gnl\|CDD\|235272
NZ_CP011313.1\|WP_002910198.1\|2032261_2032912_-\|two-component-system-response-regulator-NarL	unknown	unknown	gnl\|CDD\|182619
NZ_CP011313.1\|WP_002910103.1\|2050849_2051257_-\|DNA-binding-transcriptional-regulator-H-NS	unknown	unknown	gnl\|CDD\|182858
NZ_CP011313.1\|WP_004175568.1\|2035012_2036401_+\|NarK-family-nitrate/nitrite-MFS-transporter	unknown	unknown	gnl\|CDD\|184994
NZ_CP011313.1\|WP_002910189.1\|2042788_2043466_+\|respiratory-nitrate-reductase-subunit-gamma	unknown	unknown	gnl\|CDD\|273030
NZ_CP011313.1\|WP_032418823.1\|2036806_2040550_+\|nitrate-reductase-subunit-alpha	unknown	unknown	gnl\|CDD\|227346
NZ_CP011313.1\|WP_014907381.1\|2036526_2036640_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP011313.1\|WP_002910108.1\|2047622_2048525_+\|patatin-like-phospholipase-RssA	gnl\|CDD\|182352	PRK10279, PRK10279, patatin-like phospholipase RssA.	0
NZ_CP011313.1\|WP_002910105.1\|2049825_2050728_+\|UTP--glucose-1-phosphate-uridylyltransferase-GalU	gnl\|CDD\|184021	PRK13389, PRK13389, UTP--glucose-1-phosphate uridylyltransferase GalU.	0
NZ_CP011313.1\|WP_004151854.1\|2046166_2047009_-\|formyltetrahydrofolate-deformylase	gnl\|CDD\|235676	PRK06027, purU, formyltetrahydrofolate deformylase; Reviewed.	4.09997e-176
NZ_CP011313.1\|WP_072093171.1\|2047051_2047522_-\|YchJ-family-protein	gnl\|CDD\|234966	PRK01617, PRK01617, hypothetical protein; Provisional.	3.29241e-106
NZ_CP011313.1\|WP_046653762.1\|2032922_2034701_-\|nitrate/nitrite-two-component-system-sensor-histidine-kinase-NarX	gnl\|CDD\|182581	PRK10600, PRK10600, nitrate/nitrite two-component system sensor histidine kinase NarX.	0
NZ_CP011313.1\|WP_002910191.1\|2042078_2042789_+\|nitrate-reductase-molybdenum-cofactor-assembly-chaperone	gnl\|CDD\|185014	PRK15054, PRK15054, nitrate reductase molybdenum cofactor assembly chaperone.	1.14838e-83
NZ_CP011313.1\|WP_002910097.1\|2052583_2055259_-\|bifunctional-acetaldehyde-CoA/alcohol-dehydrogenase	gnl\|CDD\|237515	PRK13805, PRK13805, bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional.	0
NZ_CP011313.1\|WP_002910193.1\|2040546_2042082_+\|nitrate-reductase-subunit-beta	gnl\|CDD\|224063	COG1140, NarY, Nitrate reductase beta subunit [Energy production and conversion].	0
NZ_CP011313.1\|WP_002910107.1\|2048614_2049628_+\|two-component-system-response-regulator-RssB	gnl\|CDD\|182652	PRK10693, PRK10693, two-component system response regulator RssB.	0
NZ_CP011313.1\|WP_004189450.1\|2043462_2044359_-\|DMT-family-transporter	gnl\|CDD\|273359	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter. [Transport and binding proteins, Amino acids, peptides and amines].	3.2204e-15
NZ_CP011313.1\|WP_004152249.1\|2044466_2044910_+\|Lrp/AsnC-family-transcriptional-regulator	gnl\|CDD\|224439	COG1522, Lrp, Transcriptional regulators [Transcription].	1.05574e-32
NZ_CP011313.1\|WP_002910100.1\|2051818_2052436_+\|thymidine-kinase	gnl\|CDD\|235272	PRK04296, PRK04296, thymidine kinase; Provisional.	1.66434e-117
NZ_CP011313.1\|WP_002910198.1\|2032261_2032912_-\|two-component-system-response-regulator-NarL	gnl\|CDD\|182619	PRK10651, PRK10651, transcriptional regulator NarL; Provisional.	1.26442e-140
NZ_CP011313.1\|WP_002910103.1\|2050849_2051257_-\|DNA-binding-transcriptional-regulator-H-NS	gnl\|CDD\|182858	PRK10947, PRK10947, DNA-binding transcriptional regulator H-NS.	2.61324e-79
NZ_CP011313.1\|WP_004175568.1\|2035012_2036401_+\|NarK-family-nitrate/nitrite-MFS-transporter	gnl\|CDD\|184994	PRK15034, PRK15034, nitrate/nitrite transport protein NarU; Provisional.	0
NZ_CP011313.1\|WP_002910189.1\|2042788_2043466_+\|respiratory-nitrate-reductase-subunit-gamma	gnl\|CDD\|273030	TIGR00351, Respiratory_nitrate_reductase_2_gamma_chain., respiratory nitrate reductase, gamma subunit. Involved in anerobic respiration the gene product catalyzes the reaction (reduced acceptor + NO3- = Acceptor + nitrite). Another possible role_id for this gene product is in nitrogen fixation (Role_id:160). [Energy metabolism, Anaerobic].	2.8765e-130
NZ_CP011313.1\|WP_032418823.1\|2036806_2040550_+\|nitrate-reductase-subunit-alpha	gnl\|CDD\|227346	COG5013, NarG, Nitrate reductase alpha subunit [Energy production and conversion].	0

>NZ_CP011313.1|WP_004152249.1|2044466_2044910_+|Lrp/AsnC-family-transcriptional-regulator
MNDVLDEIDRAILTCLTQDARVSLKVLSARVGLTSPSTAERVKRLEERGVIQGYGARVNLAALGYSLQALVRVRPLPGLLQKVDKYIQAMPECIESDKVTGEDCFVMRLVVRDIAQLDTLLDGLAEYAQCNTSVVKSSPVKRRLPPL
>NZ_CP011313.1|WP_004189450.1|2043462_2044359_-|DMT-family-transporter
MQLTRGVWQMSLAMIISGSIGAFVLLSGLPVTDVVFWRCLIGALTLLVFIVLSRQPFSRLTRFTLALAVIGGAALVVNWLLLFAAYSRISIGMATVVYNTQPFMLVLMGMVLGERVSAVKWGWLLLAFGGVVILLSSELMPAHEEGLTTGVLLALGAAFFYALTAIIARKLHPLPAQHIAFIQVLVGVVMLLPLVHAPELTASFPWRYLLILGIVHTGIMYQLLYSAIQKLPTPVTGSLSFIYPLVAMVVDYLVFHHALSAVQLLGGMLILFAAAGNNLGWGEKKPRRGGVSEQSRAS
>NZ_CP011313.1|WP_002910189.1|2042788_2043466_+|respiratory-nitrate-reductase-subunit-gamma
MHFLNMFFFDIYPYIAGSVFLIGSWLRYDYGQYTWRAASSQMLDRKGMNLASNLFHIGILGIFAGHFLGMLTPHWMYESFLPIDVKQKMAMIAGGACGVMTLVGGLLLLKRRLLSPRVRATTTGADILILSLLMVQCALGLLTIPFSAQHMDGSEMMKLVGWAQSVVTFHGGASQHLDGVAFIFRVHLVLGMTLFLLFPFSRLVHIWSAPVEYLTRKYQIVRARR
>NZ_CP011313.1|WP_002910191.1|2042078_2042789_+|nitrate-reductase-molybdenum-cofactor-assembly-chaperone
MIELVIVSRLLEYPDAALWQHQQEMFEALASSEKLSKEDAHALGVFLRDLVAQDPLDAQAAYSELFDRGRATSLLLFEHVHGESRDRGQAMVDLMAQYERHGLLLDSHELPDHLPLYLEYLAQLPEEEALGGLRDVAPILGLLSARLQQRESRYAVLFELLLKLANTQVDSQKVAEKIADEARDDTPQALDAVWEEEQVKFFADQGCGESEISAHQRRFAGAVAPQYLNISNGGQQ
>NZ_CP011313.1|WP_002910193.1|2040546_2042082_+|nitrate-reductase-subunit-beta
MKIRSQVGMVLNLDKCIGCHTCSVTCKNVWTSREGMEYAWFNNVESKPGVGFPNDWENQEKWKGGWIRKINGKLQPRMGNRAMLLGKIFANPHLPGIDDYYEPFDYDYQNLHNAPESKHQPIARPRSLITGQRMDKITSGPNWEEILGGEFEKRAKDQNFDNMQKAMYGQFENTFMMYLPRLCEHCLNPACVATCPSGAIYKREEDGIVLIDQDKCRGWRMCITGCPYKKIYFNWKSGKSEKCIFCYPRIESGMPTVCSETCVGRIRYLGVLLYDADAIENAASTENEKDLYQRQLDVFLDPNDPKVIEQALKDGVPQGVIEAAQQSPVYKMAMDWKLALPLHPEYRTLPMVWYVPPLSPIQSAADAGELGSNGILPDVESLRIPVQYLANLLTAGDTQPVLLALKRMLAMRHYKRAETVDGVVDTRALEEVGLSEAQAQEMYRYLAIANYEDRFVVPSSHREQAREAFPEKNGCGFSFGDGCHGSDSQFNLFNSRRIDAIDVTSKTEPHA
>NZ_CP011313.1|WP_032418823.1|2036806_2040550_+|nitrate-reductase-subunit-alpha
MSKFLDRFRYFKQKGETFADGHGQLLNTNRDWEDGYRQRWQHDKIVRSTHGVNCTGSCSWKIYVKNGLVTWETQQTDYPRTRPDLPNHEPRGCPRGASYSWYLYSANRLKYPLMRKRLMKMWREAKVQHSDPVEAWASIIEDADKAKSFKQARGRGGFVRSSWQEVNELIAASNVYTVKTYGPDRVAGFSPIPAMSMVSYASGARYLSLIGGTCLSFYDWYCDLPPASPMTWGEQTDVPESADWYNSSYIIAWGSNVPQTRTPDAHFFTEVRYKGTKTVAITPDYAEIAKLCDLWLAPKQGTDAAMALAMGHVMLREFHLDKPSQYFTDYVRRYTDMPMLVMLEERDGYYAAGRTLRASDLVDSLGQENNPEWKTVAFDEKGDMTVPNGSLGFRWGDKGKWNLEQRDGKTGEEIELRLSLLGSHDEVANVGFPYFGGEGSEHFNKVDLENILLHKLPAKRLQLADGSTALVTTVYDLTMANYGLERGLNDDNCAAGYDEVKAYTPAWAEKITGVSRAHIIRTAREFADNADKTHGRSMIIVGAGLNHWFHLDMNYRGLINMLIFCGCVGQSGGGWAHYVGQEKLRPQTGWQPLAFALDWQRPARHMNSTSYFYNHSSQWRYETVTAQELLSPMADKSRYSGHLIDFNVRAERMGWLPSAPQLGVNPLRIADEAKKAGMTPVDYTVKSLKEGSIRFAAEQPENGKNHPRNLFIWRSNLLGSSGKGHEYMLKYLLGTENGIQGKDLGKQGGVKPEEVEWRDNGLDGKLDLVVTLDFRLSSTCLYSDIVLPTATWYEKDDMNTSDMHPFIHPLSAAVDPAWESKSDWEIYKGIAKKFSEVCMGHLGKETDVVTLPIQHDSAAEMAQPLDVKDWKKGECDLIPGKTAPHIIPVERDYPATYERFTSIGPLLETIGNGGKGIAWNTQSEMDLLRKLNYTKAEGPAKGQPKLETAIDAAEMILTLAPETNGQVAVKAWQALSEITGREHTHLALNKEDEKIRFRDIQAQPRKIISSPTWSGLEDEHVSYNAGYTNVHELIPWRTLTGRQSLYQDHQWMRDFGESLLVYRPPIDTRSVKAVMGEKSNGNPEKALNFLTPHQKWGIHSTYSDNLLMLTLSRGGPIVWMSEADAKDLGIEDNDWIEVFNANGALTARAVVSQRVPAGMTMMYHAQERIVNLPGSEITGQRGGIHNSVTRITPKPTHMIGGYGHLAYGFNYYGTVGSNRDEFVVVRKMKNINWLDGEGNDQVQESVK
>NZ_CP011313.1|WP_014907381.1|2036526_2036640_+|hypothetical-protein
MGLPVKWLYPLIPPLLTNPGEAPLFEVKIIKKQQVKK
>NZ_CP011313.1|WP_004175568.1|2035012_2036401_+|NarK-family-nitrate/nitrite-MFS-transporter
MSQSSLPEKANRSVITDWRPEDPEFWQQRGHRVASRNLWISVPCLLLAFCVWMLFSAVAVNLNKVGFQFTTDQLFMLTALPALSGALLRVPYAFMVPLFGGRRWTAFSTGIMIVPCVWLGFAVQDTSTPFSIFVIISLLCGFAGANFASSMANISFFFPKAKQGGALGVNGGLGNMGVSVMQLVAPLVVSISIFAVFGGNGSEQPDGSMLYLENAAWIWVPFLIIFTLAAWFFMNDLSASKASLSEQLPVLKRLHLWIMALLYLATFGSFIGFSAGFAMLSKTQFPDVQILHYAFFGPFIGALARSMGGAISDRLGGTRVTLVNFVVMAVFCALLFLTLPTNGQGGNFIAFFAVFMVLFLTAGLGSASTFQMISVIFRKLTMDRVKAQGGSEAQAMREAATDTAAALGFISAIGAIGGFFIPKAFGISLDLTGSPAGAMKVFLVFYIACVVITWAVYGRKRQ
>NZ_CP011313.1|WP_046653762.1|2032922_2034701_-|nitrate/nitrite-two-component-system-sensor-histidine-kinase-NarX
MLKRLFTPLTLVNQLALIVLLATIIGVASMAISARLVNGVQGSAHAINKAGSLRMQSYRLLAAIPLNENDQKLVADMTATVFSPELQNSARRDGQEIQLKALQQYWQLALAPGMQRAVNQAEVAQDVADFVDRIDQLVTAFDHTTEQRIERVVWIHRILAIGMALLLIFTIIWLRARLLRPWKQLLSMARAVSQRDFTQRAHISGRNEMATLGMALNNMSEELAESYAVLERRVQEKTAGLEQKNEILAFLWQANRRLHSSAPLCERISPVLNGLQGLTLLRDIEVRVYDLEDEDNHQEFTCHSDDDCDDKGCYLCPRNLPPLPDGGTTLKWRLSDAHSQYGILLATLPVGRHLSHDQQQLVDTLVEQLTSTLALDRHQEKQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPTESRQLLGQIRNELNTSWAQLRELLTTFRLQLTEPGLRPALEASCQEYSAHFGFTVQLDYQLPPRFVPSHQAIHLLQIAREALSNALKHASATEVTVTVSQRDNQVRLVVADNGRGVPDHAERSNHYGLIIMRDRAQSLRGDCQVRRRETGGTEVIVTFIPEKTFSIQ
>NZ_CP011313.1|WP_002910198.1|2032261_2032912_-|two-component-system-response-regulator-NarL
MSQQERATILLIDDHPMLRTGVKQLISMAPDIQVIGEASNGAQGIELAESLDPDLILLDLNMPGMNGLETLDKLREKSLSGRVVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALQQAAAGEMVLSEALTPVLAASLRANRATSDRDISQLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF
>NZ_CP011313.1|WP_004151854.1|2046166_2047009_-|formyltetrahydrofolate-deformylase
MHSLQRKVLRTICPDQKGLIARITNICYKHELNIVQNNEFVDHRTGRFFMRTELEGIFNDATLLADLDSALPEGSIRELNPAGRRRVVILVTKEAHCLGDLLMKANYGGLDVDIAAVIGNHDTLRSLVERFGIPFELVSHEGLSREEHDQRMGDAIAAHEPDYVVLAKYMRVLTPEFVARFPNKIINIHHSFLPAFIGARPYHQAYERGVKIIGATAHYVNDNLDEGPIIMQDVIHVDHTYTAEDMMRAGRDVEKNVLSRALYQVLAQRVFVYGNRTIIL
>NZ_CP011313.1|WP_072093171.1|2047051_2047522_-|YchJ-family-protein
MEAVLSQLCPCGSALEYSSCCQRYLSGAELAPGPSQLMRSRYSAFVMKDADYLIKTWHPSCQAQQFRAELEKGFSQTEWLGLTLFASDEGRAPNEGFVSFVARFNDNNRPGAIIERSRFLKENGQWYYIDGTRPLIGRNDPCPCGSGKKFKKCCGQ
>NZ_CP011313.1|WP_002910108.1|2047622_2048525_+|patatin-like-phospholipase-RssA
MRKLKIGLALGAGAARGWSHIGVINALQRAGIEIDIVAGCSIGSLVGAAYACNRLPALESWVCSFSNWDVLKLMDLSWRRGGLLRGEKVFNHYRRIMPVTEIERCERRFAAVATNLSTGRELWFTEGDLHLAIRASCSMPGLMSPVRHNGYWLVDGAVVNPVPVSLTRAMGADIVIAVDLQHDAHLMQQDLFSLETPRQEAEEKEGPWHTRLRARLTRMSSRRTAVTPTAMEIMTTSIQVLENRLKRNRMAGDPPDILLQPYCPQVSTLDFHRAGEAIAAGQLAVEKKMDELLPLVRTAV
>NZ_CP011313.1|WP_002910107.1|2048614_2049628_+|two-component-system-response-regulator-RssB
MTQPLAGKQILIVEDEPVFRSLLHGWLTSLGATTFQAEDGKDALHKMTEVHPDLMICDISMPRMNGLELVETLRNRGEQLPILMISATENMADIAKALRLGVQDVLLKPVKDFDRLRETVYACLYPAMFSSRVEEEERLFEDWDALVSNPIAASRLLQELQPPVQQEMSHCRIHYRQLVSADKPGLVLDIAPLSENDLAFYCLDVTRAGDNGVLAALLLRALFNGLLQEQLAHQGQRLPEMGSLLKQVNQLLRQANLPGQFPLLVGYYHSGLKNLILVSAGLNGTLNTGEHQIQISNGVPLGTLGDAYLNQISQRCTSWQCQIWGAGGRLRLMLSAE
>NZ_CP011313.1|WP_002910105.1|2049825_2050728_+|UTP--glucose-1-phosphate-uridylyltransferase-GalU
MAALNSKVRKAVIPVAGLGTRMLPATKAIPKEMLPLVDKPLIQYVVNECIAAGITEIVLVTHSSKNSIENHFDTSFELEAMLEKRVKRQLLEEVQSICPPHVTIMQVRQGLAKGLGHAVLCAHPVVGDEPVAVILPDVILDEYESDLSRDNLAEMISRFDETGASQIMVEPVEDVTAYGVVDCKGESLKPGESVPMVGVVEKPKADVAPSNLAVVGRYVLSADIWPLLAKTPPGAGDEIQLTDAIDMLIEKETVEAYHMKGKSHDCGNKLGYMQAFVEYGIRHKTLGDDFKAWLETAVAK
>NZ_CP011313.1|WP_002910103.1|2050849_2051257_-|DNA-binding-transcriptional-regulator-H-NS
MSEALKILNNIRTLRAQARECTLETLEEMLEKLEVVVNERREEENAAAAEIEERTRKLQQYREMLIADGIDPNELLSTMAAVKAGTKTKRAARPAKYSYVDENGETKTWTGQGRTPAVIKKAMDEQGKSLDDFLI
>NZ_CP011313.1|WP_004145401.1|2051679_2051811_-|hypothetical-protein
MTPIKVFYRGDDCTIFYAHSRAFSRGIVAKLKGLQTERIKKMN
>NZ_CP011313.1|WP_002910100.1|2051818_2052436_+|thymidine-kinase
MAQLYFYYSAMNAGKSTALLQSSYNYQERGMRTVVYTAEIDDRFGAGKVSSRIGLSSPARLYNPQTSLFDDIAAEHQLKPIHCVLVDESQFLTREQVHELSEVVDTLDIPVLCYGLRTDFRGELFTGSQYLLAWSDKLVELKTICFCGRKASMVLRLDQEGRPYNEGEQVVIGGNERYVSVCRKHYKEALSVGSLTKVQNQHRPC
>NZ_CP011313.1|WP_002910097.1|2052583_2055259_-|bifunctional-acetaldehyde-CoA/alcohol-dehydrogenase
MAVTNIAELNALVERVKKAQREYASFTQEQVDKIFRAAALAAADARIPLAKMAVAESGMGIVEDKVIKNHFASEYIYNAYKDEKTCGVLSEDDTFGTITIAEPIGIICGIVPTTNPTSTAIFKSLISLKTRNAIIFSPHPRAKEATNKAADIVLQAAIAAGAPKDLIGWIDQPSVELSNALMHHPDINLILATGGPGMVKAAYSSGKPAIGVGAGNTPVVIDETADIKRAVASVLMSKTFDNGVICASEQSVVVVDSVYDAVRERFASHGGYLLQGKELKAVQDIILKNGALNAAIVGQPAAKIAELAGFTVPATTKILIGEVTNVDESEPFAHEKLSPTLAMYRAKDFEDAVAKAEKLVAMGGIGHTSCLYTDQDNQPARVAYFGQMMKTARILINTPASQGGIGDLYNFKLAPSLTLGCGSWGGNSISENVGPKHLINKKTVAKRAENMLWHKLPKSIYFRRGSLPIALDEVITDGHKRALIVTDRFLFNNGYADQITSVLKAAGVETEVFFEVEADPTLTIVRKGADLANSFKPDVIIALGGGSPMDAAKIMWVMYEHPETHFEELALRFMDIRKRIYKFPKMGVKAKMVAITTTSGTGSEVTPFAVVTDDATGQKYPLADYALTPDMAIVDANLVMDMPKSLCAFGGLDAVTHALEAYVSVLASEFSDGQALQALKLLKEYLPASYHEGSKNPVARERVHSAATIAGIAFANAFLGVCHSMAHKLGSQFHIPHGLANALLICNVIRYNANDNPTKQTAFSQYDRPQARRRYAEIADHLGLSAPGDRTAAKIEKLLAWLESIKAELGIPKSIREAGVQEADFLAHVDKLSEDAFDDQCTGANPRYPLISELKQILLDTYYGREFVEGEAGAKAEVAPVKAEKKAKKSA
>NZ_CP011313.1|WP_032103886.1|2055336_2055522_+|hypothetical-protein
MHVNVYVEKSGRCFTDLLKKLYLFRFQVLLPSTLLVSSRLLTSEYKLRDLDQVLSLLIPFS

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Crispr_ID: NZ_CP011313_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011313_3

4413208-4413302

Orphan

Consensus_repeat	Method
ACTATGGTTTTTATGGTTTTTATT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP011313_3

>merge|NZ_CP011313|3|4413208-4413302|CRISPRCasFinder
TTAATGGTCACTATGGTTTTTATGGTTTTTATTCGCTGAACTGCCCGGGAGTGATATATCTCTGATTTATGACTGTGGTTTTTATGGTTTTTATT

>NZ_CP011313|3|3|4413208-4413302|CRISPRCasFinder
TTAATGGTCACTATGGTTTTTATG	GTTTTTATTCGCTGAACTGCCCGGGAGTGATATATCTCTGATTTATG
ACTGTGGTTTTTATGGTTTTTATT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011313.1\|WP_004145980.1\|4410301_4410961_+\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	unknown	unknown	gnl\|CDD\|236659
NZ_CP011313.1\|WP_004219851.1\|4400254_4400425_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011313.1\|WP_002888321.1\|4422747_4423596_+\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)	unknown	unknown	gnl\|CDD\|273208
NZ_CP011313.1\|WP_002888323.1\|4422365_4422743_+\|Co2+/Mg2+-efflux-protein-ApaG	unknown	unknown	gnl\|CDD\|180098
NZ_CP011313.1\|WP_002888327.1\|4420555_4421545_+\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	unknown	unknown	gnl\|CDD\|234696
NZ_CP011313.1\|WP_002888329.1\|4419263_4420550_+\|peptidylprolyl-isomerase-SurA	unknown	unknown	gnl\|CDD\|236758
NZ_CP011313.1\|WP_002888345.1\|4411754_4413119_-\|2-hydroxycarboxylate-transporter-family-protein	unknown	unknown	gnl\|CDD\|377030
NZ_CP011313.1\|WP_004182911.1\|4400606_4402316_+\|ribulokinase	unknown	unknown	gnl\|CDD\|235221
NZ_CP011313.1\|WP_004178574.1\|4407382_4410289_+\|RNA-polymerase-associated-protein-RapA	unknown	unknown	gnl\|CDD\|235319
NZ_CP011313.1\|WP_002888353.1\|4403966_4404662_+\|L-ribulose-5-phosphate-4-epimerase	unknown	unknown	gnl\|CDD\|236181
NZ_CP011313.1\|WP_004147026.1\|4416860_4419209_+\|LPS-assembly-protein-LptD	unknown	unknown	gnl\|CDD\|235158
NZ_CP011313.1\|WP_002888332.1\|4415789_4416617_-\|co-chaperone-DjlA	unknown	unknown	gnl\|CDD\|236512
NZ_CP011313.1\|WP_002888320.1\|4423847_4424327_-\|type-3-dihydrofolate-reductase	unknown	unknown	gnl\|CDD\|182714
NZ_CP011313.1\|WP_002888347.1\|4411035_4411575_-\|citrate-lyase-holo-[acyl-carrier-protein]-synthase	unknown	unknown	gnl\|CDD\|163145
NZ_CP011313.1\|WP_002888337.1\|4415058_4415757_+\|response-regulator	unknown	unknown	gnl\|CDD\|226931
NZ_CP011313.1\|WP_004177424.1\|4402326_4403829_+\|L-arabinose-isomerase	unknown	unknown	gnl\|CDD\|179503
NZ_CP011313.1\|WP_002888324.1\|4421541_4422363_+\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	unknown	unknown	gnl\|CDD\|234708
NZ_CP011313.1\|WP_004145972.1\|4399423_4400269_-\|arabinose-operon-transcriptional-regulator-AraC	unknown	unknown	gnl\|CDD\|236717
NZ_CP011313.1\|WP_002888340.1\|4413443_4415069_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225827
NZ_CP011313.1\|WP_023316448.1\|4404837_4407195_+\|DNA-polymerase-II	unknown	unknown	gnl\|CDD\|235595

Protein	Function_ID	Function_description	E-value
NZ_CP011313.1\|WP_004145980.1\|4410301_4410961_+\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	gnl\|CDD\|236659	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA.	7.90078e-161
NZ_CP011313.1\|WP_004177424.1\|4402326_4403829_+\|L-arabinose-isomerase	gnl\|CDD\|179503	PRK02929, PRK02929, L-arabinose isomerase; Provisional.	0
NZ_CP011313.1\|WP_002888321.1\|4422747_4423596_+\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)	gnl\|CDD\|273208	TIGR00668, Bis5'-nucleosyl-tetraphosphatase_symmetrical, bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Diadenosine 5',5"'-P1,P4-tetraphosphate (Ap4A) is a regulatory metabolite of stress conditions. It is hydrolyzed to two ADP by this enzyme. Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. [Cellular processes, Adaptations to atypical conditions].	0
NZ_CP011313.1\|WP_002888323.1\|4422365_4422743_+\|Co2+/Mg2+-efflux-protein-ApaG	gnl\|CDD\|180098	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed.	7.84855e-74
NZ_CP011313.1\|WP_002888327.1\|4420555_4421545_+\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	gnl\|CDD\|234696	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed.	0
NZ_CP011313.1\|WP_002888329.1\|4419263_4420550_+\|peptidylprolyl-isomerase-SurA	gnl\|CDD\|236758	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional.	0
NZ_CP011313.1\|WP_002888337.1\|4415058_4415757_+\|response-regulator	gnl\|CDD\|226931	COG4565, CitB, Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms].	5.03078e-66
NZ_CP011313.1\|WP_004182911.1\|4400606_4402316_+\|ribulokinase	gnl\|CDD\|235221	PRK04123, PRK04123, ribulokinase; Provisional.	0
NZ_CP011313.1\|WP_002888345.1\|4411754_4413119_-\|2-hydroxycarboxylate-transporter-family-protein	gnl\|CDD\|377030	pfam03390, 2HCT, 2-hydroxycarboxylate transporter family. The 2-hydroxycarboxylate transporter family is a family of secondary transporters found exclusively in the bacterial kingdom. They function in the metabolism of the di- and tricarboxylates malate and citrate, mostly in fermentative pathways involving decarboxylation of malate or oxaloacetate.	4.87969e-169
NZ_CP011313.1\|WP_002888353.1\|4403966_4404662_+\|L-ribulose-5-phosphate-4-epimerase	gnl\|CDD\|236181	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD.	0
NZ_CP011313.1\|WP_004147026.1\|4416860_4419209_+\|LPS-assembly-protein-LptD	gnl\|CDD\|235158	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional.	0
NZ_CP011313.1\|WP_002888320.1\|4423847_4424327_-\|type-3-dihydrofolate-reductase	gnl\|CDD\|182714	PRK10769, folA, type 3 dihydrofolate reductase.	1.71656e-127
NZ_CP011313.1\|WP_002888347.1\|4411035_4411575_-\|citrate-lyase-holo-[acyl-carrier-protein]-synthase	gnl\|CDD\|163145	TIGR03124, citrate_citX, holo-ACP synthase CitX. Members of this protein family are the CitX protein, or CitX domain of the CitXG bifunctional protein, of the citrate lyase system. CitX transfers the prosthetic group 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA to the citrate lyase gamma chain, an acyl carrier protein. This enzyme may be designated holo-ACP synthase, holo-citrate lyase synthase, or apo-citrate lyase phosphoribosyl-dephospho-CoA transferase. In a few genera, including Haemophilus, this protein occurs as a fusion protein with CitG (2.7.8.25), an enzyme involved in prosthetic group biosynthesis. This CitX family is easily separated from the holo-ACP synthases of other enzyme systems. [Energy metabolism, Fermentation, Protein fate, Protein modification and repair].	5.54697e-86
NZ_CP011313.1\|WP_002888332.1\|4415789_4416617_-\|co-chaperone-DjlA	gnl\|CDD\|236512	PRK09430, djlA, co-chaperone DjlA.	2.63694e-164
NZ_CP011313.1\|WP_002888324.1\|4421541_4422363_+\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	gnl\|CDD\|234708	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA.	3.65731e-147
NZ_CP011313.1\|WP_004178574.1\|4407382_4410289_+\|RNA-polymerase-associated-protein-RapA	gnl\|CDD\|235319	PRK04914, PRK04914, RNA polymerase-associated protein RapA.	0
NZ_CP011313.1\|WP_004145972.1\|4399423_4400269_-\|arabinose-operon-transcriptional-regulator-AraC	gnl\|CDD\|236717	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC.	0
NZ_CP011313.1\|WP_002888340.1\|4413443_4415069_+\|sensor-histidine-kinase	gnl\|CDD\|225827	COG3290, CitA, Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms].	6.55037e-173
NZ_CP011313.1\|WP_023316448.1\|4404837_4407195_+\|DNA-polymerase-II	gnl\|CDD\|235595	PRK05762, PRK05762, DNA polymerase II; Reviewed.	0

>NZ_CP011313.1|WP_002888345.1|4411754_4413119_-|2-hydroxycarboxylate-transporter-family-protein
MSTTDNAFSATLEPIDTPKTTLKQRWWHIMDNWKVGIVPLPLFLLAGGLIALDCLGGKLPSDIVVMVATLAFFGFACGEFGKRLPVLGKLGAAAICATFIPSALVHYGLLPDVVIESTTKFYKSTNILYLYICCIIVGSIMSMNRTTLIQGFLKIFFPMLCGEVVGMLVGIGVGTLLGMEPFQVFFFIVLPIMAGGVGEGAIPLSMGYAALMHMEQGVALGRVLPMVMLGSLTAIVISGCLNQLGKRFPHLTGEGQLMPNRSHETRSLSESEGVSGKTDVGTLASGALLAVLLYMMGMLGHKLIGLPAPVGMLFLAVLLKLANVVSPRLQEGSQMVYKFFRTAVTYPILFAVGVAITPWQELVNAFTLTNLLVIVSTVSALVATGFLVGKKIGMHPIDVAIVSCCQSGQGGTGDVAILTAGNRMSLMPFAQIATRIGGAINVSLGLLFLSHYLA
>NZ_CP011313.1|WP_002888347.1|4411035_4411575_-|citrate-lyase-holo-[acyl-carrier-protein]-synthase
MSVDTPAQAGVSIDALLAAKEQRAARQADWLAHYQQPVISLTLVTPGAVKDSIRYRNMMGVALQACDQLLWKHRWQTLDRQVLWLPTGPEALWCVAHPASEIKAMCSTLEQSHPLGRLWDIDVICPQNGLVGRQSLGESQRRCLLCDEPAHACARSRRHDTDLVVARVEQMIDAWFARD
>NZ_CP011313.1|WP_004145980.1|4410301_4410961_+|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA
MAMENYNPPQDPWLVILYQDEHIMVVNKPSGLLSVPGRLEEHKDSVMTRIQRDFPQAESVHRLDMATSGVIVVALNKAAERELKRQFREREPKKQYVARVWGHPQPAEGLVDLPLICDWPNRPMQKVCYETGKAAQTEYEVLEYAEDNTARVRLKPITGRSHQLRVHMLALGHPILGDRFYATPEALAMAPRLLLHAETLTITHPAYGNAMTFRAPIDF
>NZ_CP011313.1|WP_004178574.1|4407382_4410289_+|RNA-polymerase-associated-protein-RapA
MPFTLGQRWISDTESELGLGTVVALDARMVTLLFPAIGENRLYSRNDSPITRVMFNPGDTITSHEGWQLHVDKVNEENGLLSYTGTRLDTQEANVTLREVLLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKFQSEQYRMPWSGLRGQRTSLIPHQLHIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIVVPETLQHQWLVEMLRRFNLRFSLFDDERYAEAQHDAYNPFETEQLVICSLDFVRRSKQRLEHLCDAEWDLMVVDEAHHLVWSEEAPSREYQAIEQLAERVPGILLLTATPEQLGMESHFARLRLLDPNRFHDFEQFVEEQQNYRPVADAVALLLAGNKLSDSELNTLGDLIGEQDIEPLLQAANSDREDAQAARQELISMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIRLPLPTQYQTAIKVSGIMGARKTAEERARDMLYPEQIYQEFEGDTGTWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTVYDSVHDELINYLAAPESTDGFDDLIKSCRQQHDALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTSLIAFSMNLFDIVGINQDDRGENLIVLTPSDHMLVPDFPGLPEDGCTITFERDVALSREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLLELIYVVEAQAPKQLQLNRFLPATPVRMLLDKNGNNLAAQVEFESFNRQLSAVNRHTGSKLVNAVQQDVHAILQQGEAQIAKAAQGLIDAARNEADEKLTAELSRLEALKAVNPNIRDDELAAIESNRQQVMDALAQAGWRLDALRLIVVTHQ
>NZ_CP011313.1|WP_023316448.1|4404837_4407195_+|DNA-polymerase-II
MTQPRAGFLLTRHWRDTPQGTELSFWLATDDGPLQVTLPPQESVAFIPEAQRAQAERLLQGEKGLRFAPLALKDFHRQPIVGLYCRAHRQLMRLEKMLRDSGVTVYEGDIRPPERYLMERFITAPVWVEGETRGSQLVNARMKPNPDYRPPLKWVSLDIETSRHGELYCIGLEGCGQRVVYMLGPEPETPPDVDFELVFIASRPLLLEKLNAWFAEHDPDVLIGWNVVQFDLRVLQKHAERYRIPLRLGRGNSELEWREHGFKNGVFFAQANGRLIIDGIDALKSAFWNFSSFSLEAVARELLGEGKAIDNPWDRMDEIDRRFHEDKPALAIYNLQDCELVTRIFHKTEIMPFLLERATVNGLPADRHGGSVAAFSHLYFPRMHRLGYVAPNLGDVPPQASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLIDPVGLVEGLAQPDDQHSIEGFLGARFSRDKHCLPGIVSQIWHGRDEAKRQHNKPLSQALKIIMNAFYGVLGTSACRFFDPRLASSITMRGHAIMRQTKALIEAKGYDVIYGDTDSTFVWLKRPHSEAQAAEIGRELVSDVNAWWAQELSKSQLTSALELEYETHFCRFLMPTIRGADTGSKKRYAGMIQEGDAQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNQPYQDYVRETIARLMNGELDEQLVYRKRLRRPLAEYQRNVPPHVRAARLADEHNLKLGRAQQYQQRGTIKYVWTTSGPEPADYQQSPLDYDHYLTKQLQPVAEGILPFVNDDFATIVTGQLGLF
>NZ_CP011313.1|WP_002888353.1|4403966_4404662_+|L-ribulose-5-phosphate-4-epimerase
MLEDLKRQVLEANLALPKHNLVTLTWGNVSAVDREKGVFVIKPSGVDYRVMTADDMVVVSLESGEVVEGNKKPSSDTPTHRLLYQAFPTLGGIVHTHSRHATIWAQAGQSIPATGTTHADYFYGPVPCTRLMTDAEINGDYEWETGNVIVETFRQQGIDPAQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEIAYMGIFCRQLAPQLPAMQQTLLDKHYLRKHGAKAYYGQ
>NZ_CP011313.1|WP_004177424.1|4402326_4403829_+|L-arabinose-isomerase
MTIFDNYEVWFVIGSQHLYGPEALRQVTKHAEHVVNSLNAEAKLPCKLVLKPLGTTPDEITHICRDANYDDKCAGLVVWLHTFSPAKMWINGLTILNKPLLQFHTQYNAALPWDSIDMDFMNLNQTAHGGREFGFIGARMRQQHSVVTGHWQDKEAHQRIGGWMRQAVSKQDTRHLKVCRFGDNMREVAVTDGDKVAAQIKFGFSVNTWAVGDLVQVVNSISDGDISALVDEYESSYRLTPAAQVHGEKRQNVLDAARIELGMKRFLEQGGFHAFTTTFEDLHGLKQLPGLAVQRLMQQGYGFAGEGDWKTAALLRIMKVMSTGLQGGTSFMEDYTYHFDNGNDLVLGSHMLEVCPTIATAEKPILDVQPLGIGGKADPARLIFNTQTGPAIVASLIDLGDRFRLLVNTIETVPTPHDLPKLPVANALWKAQPDLRTASEAWIIAGGAHHTVFSHALNLDDMRQFAELHDIELTVIDNDTRLPSFKDALRWNEVYYGSKR
>NZ_CP011313.1|WP_004182911.1|4400606_4402316_+|ribulokinase
MAIAIGLDFGSDSVRALAVECASGAELATSVEWYPRWREGQYCDGANNRFRHHPRDYIESMEAALKSVLASLSAEQRADVVGIGVDSTGSTPAPVDAEGNVLALREEFADNPNAMFVLWKDHTAVEEAEAITRLCHQPGKEDYSRYIGGIYSSEWFWAKILHVTREDSAVAQAAASWVELCDWVPALLSGTTRPQDLRRGRCSAGHKSLWHESWGGLPPASFFDELDPIINQHLAWPLFTDTWTADVPVGTLSAEWAQRLGLPQTVAISGGAFDCHMGAVGAGAQPNALVKVIGTSTCDILIADKESVGERTVKGICGQVDGSVVPHFIGMEAGQSAFGDIYAWFGRILGWPLEQLAQQQPALREQIKASQKQLLPALTEAWANNPSLEHLPVVLDWFNGRRTPNANQRLKGVITDLNLATDAPALFGGLIAATAFGARAIMECFTEQGIPVNNVMALGGIARKNQVIMQACCDVLNRPLQIVASDQCCALGAAIFAAVAAGVYEDIPAAQQRMASQVETTLQPRPAQAQRFEQLYQRYQQWSVSAEQHYLPSAAKAEKAPQSQAALTH
>NZ_CP011313.1|WP_004219851.1|4400254_4400425_+|hypothetical-protein
MRFGHTRGSPRRYQWHQLSIFIILSLSALSRLRRRWEFGEKPAQQAKKAPAACIPP
>NZ_CP011313.1|WP_004145972.1|4399423_4400269_-|arabinose-operon-transcriptional-regulator-AraC
MAETQNDPLLPGYSFNAHLVTGLTPIEAQGYLDFFIDRPLGMKGYILNLTIRGEGVINNHGEQFVCRPGDMLLFPPGEIHHYGRHPDASEWYHQWVYFRPRAYWHEWLNWPTIFAQTGFFRPDEQWQARFGELFGQIVDAGQGAGRYSELLAINLLEQLLLRRMEAINESLHPPLDNRVRDACQYISDHLADSHFDIASVAQHVCLSPSRLSHLFRQQLGVSVLGWREDQRISQAKLLLSTTRMPIATVGRNVGFEDQLYFSRVFKKCTGASPSEFRAGCE
>NZ_CP011313.1|WP_002888340.1|4413443_4415069_+|sensor-histidine-kinase
MKLSFQYKLFISLVAFFSVLFIALGIYYYFDASRQLYQEMSARAKIQAEEIALMPNLRQQVSRHDPQAIQAFMQQIAAHSDASFIVIGDRQGVHLFHSVHPEWVGTRLVGGDNQAVLEGKSITTIRKGGLGVSLRSKTPIVDDAGRVIGIVSVGYLTSYLDSITLTKVINIFIAAVLLLIALFIFSWYFTRSIKKQIFSLEPREIGLLVRQQKAMMESIFEGVIVIDRQRRIEVINHAARSLLGLSQPARQLRGQSIDSVISPQPFFASGDMLERDTHDELCRFNQLTVLASRVRIMLENTLQGWVITFRDRNEINALTAQLSQVKRYVDNLRIMRHEQLNRMTTLSGLLHMGHYDEAIRYIQAQSEHAQELLDFISSHFHSPTLCGLLLGKATRAREKGVALSFDPACRIDRPLPSLMESELISIIGNLLDNAIEATQRAELPHEPVEVLIQLNARELIIEVADRGVGIRPDIRERIFERGVTTKTRGDHGIGLYLIEHYVTQAGGTIEVADNAPRGTIFTLFIPADAHACPQPEAHDAS
>NZ_CP011313.1|WP_002888337.1|4415058_4415757_+|response-regulator
MHHDLVDVLIIEDESELARLHAELVQKHPRLRLAGMAASLAQARQLLHATPPQLVLLDNYLPDGKGVTLMTDPALATSQCSVIFITAASDMETCSQAIRNGAFDYILKPVSWKRLSQSLERFIQFYDQQREWKIVDQQNVDSLYQLQAKNYRVDSGSKGIEEKTLALVQGLFSDREAHCFSVDEVVSAAGLSKTTARRYLEHGVETGFLEVEMLYGKIGHPRRLYRRAKVKS
>NZ_CP011313.1|WP_002888332.1|4415789_4416617_-|co-chaperone-DjlA
MQYLGKVIGVAVALLMGGGFWGVVLGFLVGHMFDRARSRRLNLFANQQERQSLFFSTTFEVMGHLTKSKGRVTEADIHVANVLMDRMNLHGASRTAAQQAFRDGKADNYPLREKMRQLRSVCFGRFDLIRMFLEIQLQAAFADGELHPNEREVLFVIADELGISRAQFDQFLRMMQGGAQFGGGSQQRSYGQHGGNAGWQQAQRGPTLEDACNVLGVKPTDDAATVKRAYRKLMNEHHPDKLVAKGLPPEMMEMAKQKAQEIQKAWELIKEQRGF
>NZ_CP011313.1|WP_004147026.1|4416860_4419209_+|LPS-assembly-protein-LptD
MKKRIPSLLATMIASALYSQQGLAADLATQCMLGVPSYDRPLVEGRPGDLPVTINADHAKGNYPDNAVFTGNVDINQGNSRLRADEVQLHQQQAAGQAQPVRTVDALGNVHYDDNQVILKGPKAWSNLNTKDTNVWQGDYQMVGRQGRGTADLMKQRGENRYTILENGSFTSCLPGSDTWSVVGSEVIHDREEQVAEIWNARFKLGSVPIFYSPYLQLPVGDKRRSGFLIPNAKYSTKNGVEFSLPYYWNIAPNFDATITPHYMNKRGGVMWENEFRYLTQLGSGLTEFDYLPSDKVYEDDHSSDSNSRRWLFYWNHSGVIDQVWRLNADYTKVSDPDYFNDFSSKYGSSTDGYATQKFSAGYVNQNFDATVSTKQFQVFDRESSNSYSAEPQLDVNYYQNDVGPFDTHLYGQVAHFVNSNNNMPEATRVHFEPTINLPLSNGWGSLNTEAKLLATHYQQSNLDKYNAANGTDYKESVSRVMPQFKVDGKMVFERDLQEGFTQTLEPRVQYLYVPYRDQSEIGNYDSTLLQSDYTGLFRDRTYSGLDRIASANQVTTGLTSRVYDAAAVERFNISVGQIYYFTESRTGDDNINWENNDTTGSLVWAGDTYWRIADEWGLRGGIQYDTRLDNVATGNGTIEYRRDENRLVQLNYRYASPEYIQATLPSYSTAAQYKQGISQVGMTASWPIVDRWSVVGAYYYDTNTRKAANQMLGVQYNSCCYAIRLGYERKVNGWNSNDNGGESKYDNTFGINIELRGLSSNYGLGTQQMLRSNILPYQSSL
>NZ_CP011313.1|WP_002888329.1|4419263_4420550_+|peptidylprolyl-isomerase-SurA
MKNWKTLLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAGQAGQQLPDDATLRHQILERLIMDQIVLQMGQKMGVKISDDQLDQAIANIAKQNNMTLDQMRSRLAYEGINYNTYRNQIRKEMLISEVRNNEVRRRITVLPQEVEALAKQIGDQNDASTELNLSHILIPLPENPTSDEVAAAQEQANSIVEQARNGANFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGGTQNISVTEVHARHILLKPSPIMNDAQAQAKLEQIAAEIKSGKITFAQAAKTYSEDPGSANQGGDLGWATPDIFDPAFRDALMRLNKGQTSGPVHSSFGWHLIELLDSRQVDRTDAAQKDRAYRMLMNRKFSEEAATWMQEQRASAYVKILSN
>NZ_CP011313.1|WP_002888327.1|4420555_4421545_+|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA
MPETRKVVITPGEPAGIGPDLVVQLAQRDWPVELVICADGALLTDRAKRLGLPLSLLPYDPAQPPVPQRAGTLTLLNVPLNVPAEPGVLNVQNGAYVVETLARACDGCLSGEFAALVTGPVHKGNINDAGIAFTGHTEFFEERAKASKVVMMLATEELRVALVTTHLPLKAISEAITPELLREIITILDHDLRTKFGIAQPHVLVCGLNPHAGEGGHMGTEEIDTIIPVLEEMRAKGMNLSGPLPADTLFQPKYLDHADAVLAMYHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTALELAGQGKADVGSFITALNLAIKMIVNTQ
>NZ_CP011313.1|WP_002888324.1|4421541_4422363_+|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA
MNNRVHQGHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTMNFGELAEKMGQPLRVFGNLPYNISTPLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCQVIPVLEVPPSAFTPPPKVDSAVVRLVPHSTMPYPVKEIRVLSRITTEAFNQRRKTIRNSLGNLFSVEVLTELGIDPAMRAENISVAQYCLMANWLSDNLPTKES
>NZ_CP011313.1|WP_002888323.1|4422365_4422743_+|Co2+/Mg2+-efflux-protein-ApaG
MIHSPRVCVQVQSVYIESQSSPEEERYVFAYTVTIRNLGRSQVQLLGRYWLITNGHGRETEVQGEGVVGEQPHIPAGGEYQYTSGAVIETPLGTMQGHYEMIDIDGAPFRIEIPVFRLAVPTLIH
>NZ_CP011313.1|WP_002888321.1|4422747_4423596_+|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)
MSTYLIGDVHGCYDELIALLAQVEFDPRRDTLWLTGDLVARGPGSLEVLRYVKSLGDSVRLVLGNHDLHLLAVFAGISRNKPKDRLKPLLEAPDADELLNWLRRQPLLQVDEEKKLVMAHAGITPQWDLETAQQCARDVEAVLSSDSYPFFLDAMYGDMPNHWSNELSGLARLRFISNAFTRMRYCFPNGQLDMYSKEAPEDAPAPLKPWFAIPGPVSNAYSIAFGHWASLEGRGTPEGIYALDTGCCWGGELTCLRWEDKQYFTQPSNRQKSLDEGEAVAS
>NZ_CP011313.1|WP_002888320.1|4423847_4424327_-|type-3-dihydrofolate-reductase
MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVVMGRLTWESIGRPLPGRKNIVISSKPGSDDRVQWVSSVEEAIAACGDVEEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVEGDTHFPDYDPDEWESVFSEFHDADAQNSHSYCFEILERR

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

657675 : 676460

uncultured_Caudovirales_phage(80.0%)

terminase,head,protease,transposase,tail,integrase,portal,capsid

attL 657605:657625|attR 673752:673772

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
657605:657625	attL	NA	NA	NA	NA
WP_046654812.1\|657675_659100_+\|integrase	integrase family protein	NA	NA	NA	NA
WP_004174241.1\|659096_659711_+	hypothetical protein	NA	NA	NA	NA
WP_004174242.1\|659858_660065_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_071533773.1\|660173_660365_-	toxin-antitoxin system HicB family antitoxin	NA	NA	NA	NA
WP_046653341.1\|660504_660765_+	host cell division inhibitor Icd-like protein	NA	NA	NA	NA
WP_071533744.1\|660757_660958_+	hypothetical protein	NA	NA	NA	NA
WP_046653342.1\|660962_661262_+	DUF4222 domain-containing protein	NA	NA	NA	NA
WP_046653344.1\|661258_663058_+	DNA primase	Q7M2A8	Enterobacteria_phage	3.9e-130	49.0
WP_046653346.1\|663337_663583_+	hypothetical protein	NA	NA	NA	NA
WP_004176137.1\|663953_664985_-\|transposase	IS630-like element ISEc33 family transposase	NA	NA	NA	NA
WP_046653347.1\|665819_666986_+\|capsid	phage major capsid protein	A0A2H4JED2	uncultured_Caudovirales_phage	1.0e-195	89.9
WP_046653348.1\|667036_667597_+\|head,protease	HK97 family phage prohead protease	A0A2H4JB68	uncultured_Caudovirales_phage	1.2e-98	95.7
WP_004174256.1\|667598_668834_+\|portal	phage portal protein	A0A2H4JFJ9	uncultured_Caudovirales_phage	1.0e-233	95.9
WP_046653351.1\|668830_669169_+\|head	phage head closure protein	A0A2H4JHK5	uncultured_Caudovirales_phage	9.6e-22	47.7
WP_046653352.1\|669161_669455_+\|head,tail	phage gp6-like head-tail connector protein	A0A2H4JD08	uncultured_Caudovirales_phage	9.4e-42	81.4
WP_044245563.1\|669454_669898_+	HNH endonuclease	A0A2H4JAS8	uncultured_Caudovirales_phage	4.9e-50	63.3
WP_040211070.1\|670173_670530_+\|terminase	phage terminase small subunit P27 family	A0A2H4JHS3	uncultured_Caudovirales_phage	1.6e-59	97.4
WP_046653357.1\|670513_672175_+\|terminase	terminase large subunit	A0A2H4JB64	uncultured_Caudovirales_phage	0.0e+00	96.0
WP_148552461.1\|672301_673471_-	hypothetical protein	NA	NA	NA	NA
WP_002917636.1\|674012_674519_+	G/U mismatch-specific DNA glycosylase	NA	NA	NA	NA
673752:673772	attR	NA	NA	NA	NA
WP_004174339.1\|674618_676460_-	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	8.3e-35	33.7

DBSCAN-SWA_2

1687121 : 1695226

Planktothrix_phage(28.57%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004175147.1\|1687121_1687985_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	5.7e-10	27.5
WP_046653648.1\|1687995_1688769_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.3e-25	36.3
WP_004151134.1\|1689009_1689906_-	lipid kinase YegS	A0A1V0SBJ0	Catovirus	6.1e-15	29.8
WP_000019473.1\|1690261_1691242_-\|transposase	IS5-like element ISKpn26 family transposase	Q38213	Escherichia_phage	8.9e-185	99.1
WP_046653651.1\|1691348_1692710_-\|tRNA	tRNA 5-hydroxyuridine modification protein YegQ	Q6DW11	Phage_TP	1.8e-207	94.8
WP_004175198.1\|1693028_1693751_-	two-component system response regulator BaeR	W8CYM9	Bacillus_phage	8.3e-31	33.2
WP_046653654.1\|1693747_1695226_-	two-component system sensor histidine kinase BaeS	W8CYF6	Bacillus_phage	8.5e-30	28.3

DBSCAN-SWA_3

1946468 : 1999508

Staphylococcus_phage(20.0%)

plate,protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_019705163.1\|1946468_1947215_+\|protease	proteasome-type protease	NA	NA	NA	NA
WP_026008344.1\|1947653_1948640_+	fatty acid desaturase	NA	NA	NA	NA
WP_004189318.1\|1948632_1949433_+	PhnD/SsuA/transferrin family substrate-binding protein	NA	NA	NA	NA
WP_004145488.1\|1949470_1949593_-	nitrilotriacetate monooxygenase	NA	NA	NA	NA
WP_004219597.1\|1949890_1950034_-	hypothetical protein	NA	NA	NA	NA
WP_002910764.1\|1950210_1951152_+	transcriptional regulator TdcA	NA	NA	NA	NA
WP_032441318.1\|1951245_1952235_+	bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB	NA	NA	NA	NA
WP_004200322.1\|1952260_1953592_+	threonine/serine transporter TdcC	NA	NA	NA	NA
WP_029602072.1\|1953619_1954828_+	propionate kinase	NA	NA	NA	NA
WP_004175487.1\|1954856_1957151_+	formate C-acetyltransferase	A0A2P0VNR5	Tetraselmis_virus	1.1e-158	41.7
WP_004225356.1\|1957201_1957348_-	hypothetical protein	NA	NA	NA	NA
WP_026008343.1\|1957637_1958696_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_004175489.1\|1958805_1959720_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
WP_019705159.1\|1959729_1961016_+	high-affinity branched-chain amino acid ABC transporter permease LivM	NA	NA	NA	NA
WP_004148803.1\|1961012_1961888_+	ATP-binding cassette domain-containing protein	W8CYL7	Bacillus_phage	9.5e-05	41.5
WP_004175491.1\|1961884_1962604_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.5e-11	26.0
WP_002910720.1\|1962609_1963503_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_004180410.1\|1963786_1965430_+	phosphoenolpyruvate carboxykinase (ATP)	A0A2H4PQN1	Staphylococcus_phage	5.7e-136	50.4
WP_002910717.1\|1965479_1965956_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_002910715.1\|1966056_1966983_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_004175494.1\|1967286_1968582_+	MFS transporter	Q6JIH2	Burkholderia_virus	9.6e-62	36.8
WP_026008342.1\|1968593_1969403_+	substrate-binding domain-containing protein	NA	NA	NA	NA
WP_004152315.1\|1969377_1970277_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_046653733.1\|1970386_1970869_-	cold shock domain-containing protein	NA	NA	NA	NA
WP_073971752.1\|1970966_1971758_+	RluA family pseudouridine synthase	A0A2H4UV25	Bodo_saltans_virus	3.0e-05	27.2
WP_002910652.1\|1971783_1972323_-	DUF2058 domain-containing protein	NA	NA	NA	NA
WP_002910650.1\|1972437_1972767_-	gamma-glutamylcyclotransferase	NA	NA	NA	NA
WP_004148795.1\|1972937_1973099_+	hypothetical protein	NA	NA	NA	NA
WP_046653737.1\|1973336_1974677_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_023280277.1\|1974673_1975327_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_046653741.1\|1975330_1977028_+	OmpA family protein	NA	NA	NA	NA
WP_040216883.1\|1977489_1979976_+	type VI secretion system tip protein VgrG	NA	NA	NA	NA
WP_046653744.1\|1979999_1981355_+	S-type Pyocin	NA	NA	NA	NA
WP_002910593.1\|1981355_1981865_+	hypothetical protein	NA	NA	NA	NA
WP_046653746.1\|1981861_1982398_+	hypothetical protein	NA	NA	NA	NA
WP_162487897.1\|1982474_1982999_+	hypothetical protein	NA	NA	NA	NA
WP_040216887.1\|1983082_1983592_+	hypothetical protein	NA	NA	NA	NA
WP_040216891.1\|1983588_1983780_+	hypothetical protein	NA	NA	NA	NA
WP_014343205.1\|1983957_1984986_+	hypothetical protein	NA	NA	NA	NA
WP_014343204.1\|1985003_1985315_+	hypothetical protein	NA	NA	NA	NA
WP_014343203.1\|1985336_1986230_+	SUMF1/EgtB/PvdO family nonheme iron enzyme	A0A075BSL8	Microcystis_phage	8.8e-14	28.8
WP_014343202.1\|1986275_1986392_+	hypothetical protein	NA	NA	NA	NA
WP_014343201.1\|1986413_1987307_+	SUMF1/EgtB/PvdO family nonheme iron enzyme	A0A075BSL8	Microcystis_phage	1.7e-12	27.3
WP_038435084.1\|1987332_1987461_+	hypothetical protein	NA	NA	NA	NA
WP_000019473.1\|1987736_1988717_-\|transposase	IS5-like element ISKpn26 family transposase	Q38213	Escherichia_phage	8.9e-185	99.1
WP_162487910.1\|1988790_1989024_+	SUMF1/EgtB/PvdO family nonheme iron enzyme	NA	NA	NA	NA
WP_014343198.1\|1988987_1989560_+	SUMF1/EgtB/PvdO family nonheme iron enzyme	A0A7H6	Microcystis_virus	3.9e-07	33.3
WP_014343197.1\|1989693_1989921_+	hypothetical protein	NA	NA	NA	NA
WP_014343196.1\|1989904_1990039_+	hypothetical protein	NA	NA	NA	NA
WP_014343194.1\|1990240_1990483_+	hypothetical protein	NA	NA	NA	NA
WP_004175522.1\|1990780_1991047_+	PAAR domain-containing protein	NA	NA	NA	NA
WP_014343193.1\|1991050_1992208_+	hypothetical protein	NA	NA	NA	NA
WP_046653757.1\|1992191_1995602_+	type VI secretion protein VasK	NA	NA	NA	NA
WP_046653759.1\|1995735_1997499_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_162487911.1\|1997528_1998545_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_077256175.1\|1998525_1999062_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_032418818.1\|1999064_1999508_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA

DBSCAN-SWA_4

2073390 : 2119992

Escherichia_phage(19.05%)

head,terminase,integrase

attL 2073199:2073220|attR 2120958:2120979

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2073199:2073220	attL	NA	NA	NA	NA
WP_046653769.1\|2073390_2074614_+\|integrase	site-specific integrase	A0A1P8DTG6	Proteus_phage	2.5e-136	59.0
WP_046653772.1\|2074796_2075024_-	TraR/DksA family transcriptional regulator	A0A0K2FI84	Escherichia_phage	2.2e-14	58.0
WP_046653774.1\|2075020_2075212_-	DUF1382 family protein	A0A0P0ZC60	Stx2-converting_phage	7.8e-13	62.7
WP_046653776.1\|2075208_2075895_-	hypothetical protein	M1F3E2	Salmonella_phage	3.1e-67	60.7
WP_046653778.1\|2075887_2076232_-	hypothetical protein	NA	NA	NA	NA
WP_046653780.1\|2076228_2076450_-	hypothetical protein	NA	NA	NA	NA
WP_077257445.1\|2076446_2078132_-	phage N-6-adenine-methyltransferase	Q6V7R9	Burkholderia_virus	2.0e-107	56.8
WP_046653782.1\|2078128_2078434_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_046653785.1\|2078468_2078951_-	siphovirus Gp157 family protein	G8C7S9	Escherichia_phage	8.2e-75	92.5
WP_046653787.1\|2078947_2079862_-	DNA recombinase	G8C7T0	Escherichia_phage	4.3e-157	90.8
WP_016529276.1\|2079871_2080156_-	host nuclease inhibitor GamL	G8C7T1	Escherichia_phage	8.6e-40	79.8
WP_040182104.1\|2080244_2080439_-	hypothetical protein	NA	NA	NA	NA
WP_162487899.1\|2080431_2080557_-	hypothetical protein	NA	NA	NA	NA
WP_046653792.1\|2081083_2081902_-	DUF3037 domain-containing protein	NA	NA	NA	NA
WP_046653794.1\|2081898_2082723_-	hypothetical protein	NA	NA	NA	NA
WP_046653796.1\|2083032_2083731_-	helix-turn-helix transcriptional regulator	Q76H56	Enterobacteria_phage	1.8e-107	83.6
WP_046653798.1\|2083842_2084070_+	helix-turn-helix domain-containing protein	Q76H55	Enterobacteria_phage	1.4e-24	77.1
WP_004139615.1\|2084109_2084331_+	bacteriophage CII family protein	NA	NA	NA	NA
WP_046653800.1\|2084416_2085277_+	replication protein	K7PGT1	Enterobacteria_phage	6.0e-60	49.5
WP_046653802.1\|2085273_2086122_+	ATP-binding protein	K7PLU3	Enterobacteria_phage	2.3e-88	60.1
WP_046653803.1\|2086118_2086421_+	hypothetical protein	NA	NA	NA	NA
WP_046653806.1\|2086417_2086642_+	hypothetical protein	H9C169	Pectobacterium_phage	6.4e-14	50.0
WP_071844628.1\|2087511_2088297_+	hypothetical protein	NA	NA	NA	NA
WP_148552462.1\|2088409_2088781_+	hypothetical protein	NA	NA	NA	NA
WP_148552463.1\|2089065_2089338_+	hypothetical protein	NA	NA	NA	NA
WP_004884220.1\|2089582_2090038_+	dLP12 prophage	K7P7B8	Enterobacteria_phage	1.0e-55	69.5
WP_046653814.1\|2090037_2090208_+	hypothetical protein	G8C7V4	Escherichia_phage	2.8e-14	71.4
WP_046653817.1\|2090200_2090782_+	protein ninG	E7C9S3	Salmonella_phage	1.8e-39	43.8
WP_046653819.1\|2090778_2091009_+	hypothetical protein	NA	NA	NA	NA
WP_046653822.1\|2091005_2091146_+	YlcG family protein	NA	NA	NA	NA
WP_046653824.1\|2091142_2091643_+	antiterminator	G8C7V7	Escherichia_phage	5.7e-87	91.5
WP_046653826.1\|2092689_2093004_+	hypothetical protein	H6WRZ3	Salmonella_phage	6.3e-44	83.7
WP_046653828.1\|2093006_2093510_+	lysozyme	K7P7Q3	Enterobacteria_phage	8.5e-75	80.2
WP_046653830.1\|2093506_2093896_+	DUF2570 domain-containing protein	Q8SBD9	Shigella_phage	7.7e-23	46.0
WP_071844629.1\|2094187_2094763_+	hypothetical protein	NA	NA	NA	NA
WP_046654825.1\|2095475_2096111_+	hypothetical protein	I6S676	Salmonella_phage	2.3e-101	80.2
WP_046653833.1\|2096141_2096609_+	DUF2280 domain-containing protein	I6S1P9	Salmonella_phage	1.1e-57	73.8
WP_046653834.1\|2096592_2097891_+\|terminase	PBSX family phage terminase large subunit	Q5G8Y7	Enterobacteria_phage	2.3e-241	94.8
WP_046653835.1\|2097903_2099373_+	DUF1073 domain-containing protein	F1C5D7	Cronobacter_phage	4.5e-148	55.9
WP_046653836.1\|2099299_2100310_+\|head	phage head morphogenesis protein	F1C5D8	Cronobacter_phage	1.2e-112	67.1
WP_052741619.1\|2100310_2100655_-	hypothetical protein	NA	NA	NA	NA
WP_046653837.1\|2100677_2102033_+	hypothetical protein	F1C5D9	Cronobacter_phage	1.1e-127	52.4
WP_016529582.1\|2102032_2102494_+	hypothetical protein	B1GS72	Salmonella_phage	5.0e-29	50.3
WP_023283359.1\|2102490_2103546_+	hypothetical protein	A0A291AXD4	Shigella_phage	1.2e-102	53.5
WP_046653839.1\|2103578_2103863_+	hypothetical protein	NA	NA	NA	NA
WP_046653840.1\|2103865_2104246_+	hypothetical protein	A0A0M3LQS8	Mannheimia_phage	4.2e-18	42.1
WP_071844633.1\|2104245_2104419_+	50S ribosomal protein L13	Q5G8X7	Enterobacteria_phage	3.2e-13	52.6
WP_046654827.1\|2104418_2104781_+	hypothetical protein	A0A0M3LSC9	Mannheimia_phage	1.6e-19	49.2
WP_032444927.1\|2104783_2105152_+	hypothetical protein	F1C5E3	Cronobacter_phage	2.5e-47	82.0
WP_046653844.1\|2105148_2105532_+	hypothetical protein	NA	NA	NA	NA
WP_046653847.1\|2105590_2106355_+	immunoglobulin domain-containing protein	G0ZNE6	Cronobacter_phage	9.4e-41	43.4
WP_046653848.1\|2106422_2107112_+	hypothetical protein	G0ZNE7	Cronobacter_phage	6.0e-63	54.2
WP_046653852.1\|2107529_2108366_+	hypothetical protein	A0A0M4R2T6	Salmonella_phage	7.1e-50	43.6
WP_046653854.1\|2108682_2109261_+	hypothetical protein	NA	NA	NA	NA
WP_071844635.1\|2109296_2109626_+	hypothetical protein	A0A222YZ97	Escherichia_phage	4.2e-22	53.3
WP_046653856.1\|2109668_2112302_+	tape measure protein	A0A1B1W284	Salmonella_phage	4.8e-84	38.1
WP_046653859.1\|2112342_2112522_+	hypothetical protein	NA	NA	NA	NA
WP_071844636.1\|2112498_2112768_-	DUF1883 domain-containing protein	NA	NA	NA	NA
WP_023283377.1\|2112894_2113371_+	hypothetical protein	A0A2P1MXB5	Escherichia_phage	3.0e-37	49.0
WP_046653863.1\|2113370_2113841_+	hypothetical protein	R9TPR6	Aeromonas_phage	4.7e-27	39.1
WP_023328737.1\|2113837_2114233_+	hypothetical protein	F1C5F2	Cronobacter_phage	1.2e-36	55.6
WP_046653866.1\|2114219_2116697_+	MoaD/ThiS family protein	F1C5A7	Cronobacter_phage	3.6e-198	45.5
WP_046653868.1\|2119179_2119992_+	hypothetical protein	A0A2H4N7C5	Pectobacterium_phage	8.5e-40	35.7
2120958:2120979	attR	NA	NA	NA	NA

DBSCAN-SWA_5

2729652 : 2739067

Escherichia_phage(87.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_162487903.1\|2729652_2731287_+	DUF4981 domain-containing protein	L0N6M2	Herpes_simplex_virus	4.4e-181	55.7
WP_004176258.1\|2731341_2732607_+	MFS transporter	NA	NA	NA	NA
WP_020805010.1\|2732637_2733726_-	AAA family ATPase	A0A077SLJ9	Escherichia_phage	1.8e-210	99.7
WP_004176262.1\|2733812_2734073_-	hypothetical protein	A0A077SK33	Escherichia_phage	5.4e-41	98.8
WP_063864697.1\|2734370_2735231_+	class A beta-lactamase SHV-63	A0A077SL40	Escherichia_phage	2.9e-155	99.0
WP_046654237.1\|2735251_2736013_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	7.2e-134	99.2
WP_002903955.1\|2736274_2737177_+	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	2.6e-159	99.7
WP_004183946.1\|2737188_2738454_+	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	6.6e-233	99.3
WP_002210516.1\|2738446_2739067_+	aldolase	A0A077SK32	Escherichia_phage	8.0e-115	100.0

DBSCAN-SWA_6

3022330 : 3052256

Enterobacteria_phage(24.14%)

holin,terminase,integrase

attL 3017063:3017078|attR 3049562:3049577

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3017063:3017078	attL	NA	NA	NA	NA
WP_046654357.1\|3022330_3023731_-	DUF4055 domain-containing protein	A0A1B0VMH0	Pseudomonas_phage	1.2e-126	53.5
WP_004190663.1\|3023730_3025038_-\|terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	3.6e-149	58.9
WP_046654359.1\|3025015_3026011_-\|terminase	terminase small subunit	Q5QF76	Pseudomonas_virus	1.5e-38	45.5
WP_038421382.1\|3026569_3026815_-	DUF2560 family protein	A0A286N2R1	Klebsiella_phage	1.6e-34	97.5
WP_029603003.1\|3027139_3027412_-	hypothetical protein	NA	NA	NA	NA
WP_031591489.1\|3027544_3027829_+	hypothetical protein	NA	NA	NA	NA
WP_004190672.1\|3028064_3028340_-	hypothetical protein	A0A286N2Q8	Klebsiella_phage	2.2e-08	72.5
WP_004190674.1\|3028336_3028681_-	hypothetical protein	A0A286N2Q7	Klebsiella_phage	2.0e-38	80.7
WP_046654365.1\|3028677_3029217_-	glycoside hydrolase family 108 protein	A0A286N2Q6	Klebsiella_phage	5.7e-101	98.3
WP_024176410.1\|3029213_3029513_-\|holin	holin	A0A286N2Q5	Klebsiella_phage	4.5e-39	83.8
WP_046654367.1\|3030633_3031260_-	YagU family protein	NA	NA	NA	NA
WP_046654369.1\|3031512_3032328_-	molecular chaperone	A0A286N2Q2	Klebsiella_phage	9.5e-108	74.1
WP_046654371.1\|3032324_3032621_-	DUF1364 domain-containing protein	A0A0U2KD41	Escherichia_phage	9.2e-37	74.0
WP_016946309.1\|3032829_3033426_-	DUF1367 family protein	K7PKS6	Enterobacteria_phage	1.3e-90	80.1
WP_004184503.1\|3033804_3034038_-	DinI-like family protein	K7PM44	Enterobacteria_phage	2.9e-25	68.8
WP_032413665.1\|3034790_3035090_-	hypothetical protein	NA	NA	NA	NA
WP_038991414.1\|3035185_3035614_-	hypothetical protein	NA	NA	NA	NA
WP_020804600.1\|3035617_3035839_-	hypothetical protein	A9YWV3	Burkholderia_phage	1.3e-11	49.4
WP_020804604.1\|3035835_3036090_-	hypothetical protein	S5MQM0	Escherichia_phage	1.4e-09	50.6
WP_020804603.1\|3036082_3036286_-	hypothetical protein	A0A2R2Z313	Escherichia_phage	3.8e-26	84.8
WP_032417027.1\|3037059_3037395_-	DUF977 family protein	H6WRX9	Salmonella_phage	1.3e-10	43.0
WP_032417026.1\|3037402_3038152_-	ATP-binding protein	H6WRX8	Salmonella_phage	1.3e-119	83.1
WP_032417025.1\|3038154_3039069_-	DNA-binding protein	V5URT9	Shigella_phage	1.0e-89	54.1
WP_020804480.1\|3039083_3039272_-	ClpX C4-type zinc finger	NA	NA	NA	NA
WP_023287506.1\|3039359_3039896_-	bacteriophage regulatory protein CII	K7PJT7	Enterobacteria_phage	2.1e-63	70.4
WP_029503646.1\|3039898_3040132_-	Rha family transcriptional regulator	A0A0M4QX15	Salmonella_phage	2.1e-20	61.6
WP_004190707.1\|3040236_3040632_+	helix-turn-helix transcriptional regulator	K7PM35	Enterobacteria_phage	3.1e-48	74.0
WP_136085610.1\|3040649_3040748_+	YoaK family small membrane protein	NA	NA	NA	NA
WP_020805737.1\|3041892_3042096_-	hypothetical protein	A0A192Y6Q5	Salmonella_phage	6.3e-21	76.1
WP_158423358.1\|3042460_3042691_-	hypothetical protein	NA	NA	NA	NA
WP_020804303.1\|3042984_3043176_+	YebW family protein	NA	NA	NA	NA
WP_020804294.1\|3043184_3043340_+	hypothetical protein	K7P7H7	Enterobacteria_phage	5.7e-14	71.2
WP_038991407.1\|3043477_3046576_+	exodeoxyribonuclease	H6WRX1	Salmonella_phage	8.2e-293	55.5
WP_032421692.1\|3046588_3047698_+	recombinase RecT	H6WRX0	Salmonella_phage	9.1e-186	87.0
WP_022631172.1\|3047738_3047978_+	DUF4060 family protein	M9P0E0	Enterobacteria_phage	6.8e-22	67.5
WP_046654382.1\|3048198_3049416_-\|integrase	site-specific integrase	K7PGY1	Enterobacteria_phage	9.5e-120	51.5
WP_004151901.1\|3049562_3050453_+	peptide ABC transporter permease SapC	NA	NA	NA	NA
3049562:3049577	attR	NA	NA	NA	NA
WP_004140266.1\|3050452_3051445_+	peptide ABC transporter ATP-binding protein SapD	G9BWD6	Planktothrix_phage	3.0e-07	27.2
WP_004140269.1\|3051446_3052256_+	peptide ABC transporter ATP-binding protein SapF	A0A2H4PQG7	Staphylococcus_phage	2.1e-14	28.9

DBSCAN-SWA_7

3454887 : 3464351

Brazilian_cedratvirus(16.67%)

protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004179158.1\|3454887_3456609_+	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	A0A2R8FG22	Brazilian_cedratvirus	1.5e-14	34.3
WP_004141853.1\|3456635_3457355_+\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
WP_001040187.1\|3457708_3457927_+	translation initiation factor IF-1	NA	NA	NA	NA
WP_002896522.1\|3458047_3460327_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.6e-165	42.0
WP_002896520.1\|3460357_3460675_-\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	2.0e-13	45.7
WP_002896516.1\|3461000_3461222_+	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	1.3e-16	61.2
WP_004150848.1\|3461298_3463239_-	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	1.9e-37	40.5
WP_002896440.1\|3463235_3464351_-	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.3e-06	52.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP011314

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP011313

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection