CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP011119	Yersinia enterocolitica strain FORC_002 plasmid pFORC2, complete sequence	0 crisprs	NA	0	0	0	0
NZ_CP011118	Yersinia enterocolitica strain FORC_002 chromosome, complete genome	0 crisprs	csa3,DEDDh,cas3,RT,DinG,WYL	0	0	9	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

69073 : 77395

Enterobacteria_phage(66.67%)

integrase

attL 57808:57821|attR 72156:72169

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
57808:57821	attL	NA	NA	NA	NA
WP_046694365.1\|69073_70249_+\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	1.6e-185	80.8
WP_046694366.1\|70265_71081_+	DUF2971 domain-containing protein	J9Q7Y9	Salmonella_phage	1.2e-09	25.6
WP_032814188.1\|71147_71459_-	hypothetical protein	NA	NA	NA	NA
WP_071843340.1\|71840_72086_-	ogr/Delta-like zinc finger family protein	A0A2I8TV89	Erwinia_phage	2.6e-13	56.1
WP_046694367.1\|72087_72807_-	hypothetical protein	NA	NA	NA	NA
72156:72169	attR	NA	NA	NA	NA
WP_046694368.1\|73406_73664_+	AlpA family transcriptional regulator	Q7M299	Enterobacteria_phage	2.7e-16	57.1
WP_046695634.1\|73711_73900_+	hypothetical protein	NA	NA	NA	NA
WP_046694369.1\|73904_74450_+	ash family protein	Q7M2A7	Enterobacteria_phage	9.4e-27	56.8
WP_046694370.1\|74446_74710_+	hypothetical protein	NA	NA	NA	NA
WP_046051905.1\|74706_75048_+	DUF5375 family protein	NA	NA	NA	NA
WP_046694371.1\|75061_77395_+	toprim domain-containing protein	Q7M2A8	Enterobacteria_phage	2.6e-259	59.7

DBSCAN-SWA_2

163893 : 169991

Synechococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_019081620.1\|163893_164772_+	dTDP-4-dehydrorhamnose reductase	I7HXC9	Enterobacteria_phage	7.0e-40	38.9
WP_019081619.1\|164776_165325_+	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	1.2e-50	52.5
WP_019081618.1\|165358_166120_+	NTP transferase domain-containing protein	A0A1D8KNV9	Synechococcus_phage	3.4e-59	50.2
WP_019081617.1\|166116_166743_+	hypothetical protein	NA	NA	NA	NA
WP_032901223.1\|166751_167405_+	HAD family phosphatase	A0A1D8KNV9	Synechococcus_phage	1.7e-35	40.1
WP_019081615.1\|167394_168117_+	hypothetical protein	A0A1D8KNV9	Synechococcus_phage	3.0e-28	30.0
WP_019081614.1\|168118_168445_+	hypothetical protein	NA	NA	NA	NA
WP_050919803.1\|168528_169269_+	ABC transporter permease	NA	NA	NA	NA
WP_050123130.1\|169265_169991_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	4.9e-07	22.9

DBSCAN-SWA_3

400592 : 497835

uncultured_Caudovirales_phage(33.33%)

tRNA,integrase,holin,capsid,portal,tail,terminase,head,protease

attL 405709:405726|attR 481843:481860

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_046694448.1\|400592_401621_+\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA
WP_005165239.1\|401827_402046_+	envelope stress response protein PspG	NA	NA	NA	NA
WP_046050113.1\|402386_402713_-	hypothetical protein	NA	NA	NA	NA
WP_046050114.1\|402925_403909_-	quinone oxidoreductase	NA	NA	NA	NA
WP_005165232.1\|404093_405500_+	replicative DNA helicase	A0A1B0VG30	Salmonella_phage	7.4e-193	75.7
WP_046050115.1\|405529_406609_+	alanine racemase	A0A0P0YM39	Yellowstone_lake_mimivirus	8.9e-29	29.3
405709:405726	attL	NA	NA	NA	NA
WP_046694449.1\|406666_407860_+	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA
WP_019082203.1\|408363_408717_+	MmcQ/YjbR family DNA-binding protein	NA	NA	NA	NA
WP_019080107.1\|408775_411607_-	excinuclease ABC subunit UvrA	A0A1B1IVR3	uncultured_Mediterranean_phage	1.7e-308	55.2
WP_019080106.1\|412010_412562_+	single-stranded DNA-binding protein SSB1	A0A0A0P1Q9	Enterobacteria_phage	1.5e-56	88.5
WP_019080105.1\|412757_413429_+	glutathione S-transferase	NA	NA	NA	NA
WP_046694450.1\|413789_415157_+	NCS2 family permease	A0A0R6PHV4	Moraxella_phage	7.1e-164	73.9
WP_019080103.1\|415371_417021_+	Na+/H+ antiporter	NA	NA	NA	NA
WP_019080102.1\|417036_417954_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_019080101.1\|418082_418508_+	CidA/LrgA family protein	NA	NA	NA	NA
WP_005174368.1\|418500_419190_+	LrgB family protein	NA	NA	NA	NA
WP_172654773.1\|419260_419986_-	amino acid ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.5e-19	30.3
WP_019080100.1\|420030_421140_-	amino acid ABC transporter permease	NA	NA	NA	NA
WP_020424093.1\|421149_422328_-	amino acid ABC transporter permease	NA	NA	NA	NA
WP_019080098.1\|422390_423416_-	amino acid ABC transporter substrate-binding protein	A0A1B1IT51	uncultured_Mediterranean_phage	5.6e-65	36.9
WP_046694451.1\|423836_425375_+	PhoPQ-regulated protein	NA	NA	NA	NA
WP_019080096.1\|425447_426368_-	kdo(2)-lipid IV(A) palmitoleoyltransferase	A0A1W6JP29	Morganella_phage	8.0e-79	53.5
WP_026017912.1\|426726_428139_-	anion permease	NA	NA	NA	NA
WP_005163087.1\|428728_428941_-	cold shock protein CspG	A0A1W6JNX5	Morganella_phage	4.4e-25	80.0
WP_005163090.1\|429212_429425_-	RNA chaperone/antiterminator CspA	A0A1W6JNX5	Morganella_phage	1.7e-24	80.0
WP_005163090.1\|429696_429909_-	RNA chaperone/antiterminator CspA	A0A1W6JNX5	Morganella_phage	1.7e-24	80.0
WP_019080091.1\|430290_430761_-	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA
WP_046050120.1\|431046_432606_+	GGDEF domain-containing protein	A0A127AWB9	Bacillus_phage	2.1e-18	36.4
WP_046694452.1\|432857_434087_+\|integrase	site-specific integrase	A0A2H4JB45	uncultured_Caudovirales_phage	1.1e-142	59.2
WP_046694453.1\|434185_435085_+	hypothetical protein	NA	NA	NA	NA
WP_046694454.1\|435187_435469_+	AlpA family phage regulatory protein	A0A2H4JB58	uncultured_Caudovirales_phage	2.5e-07	43.4
WP_050078199.1\|435608_436127_+	hypothetical protein	NA	NA	NA	NA
WP_052750724.1\|436123_437410_+	host cell division inhibitor Icd-like protein	NA	NA	NA	NA
WP_046694456.1\|437402_437594_+	hypothetical protein	NA	NA	NA	NA
WP_046694457.1\|437586_437781_+	hypothetical protein	NA	NA	NA	NA
WP_046694458.1\|437761_437932_+	DUF4222 domain-containing protein	NA	NA	NA	NA
WP_046694459.1\|437934_438129_+	hypothetical protein	NA	NA	NA	NA
WP_046694460.1\|438125_440483_+	toprim domain-containing protein	Q7M2A8	Enterobacteria_phage	1.4e-140	38.4
WP_046694461.1\|440919_441162_+	hypothetical protein	NA	NA	NA	NA
WP_046694462.1\|441385_442558_+\|capsid	phage major capsid protein	A0A2H4JED2	uncultured_Caudovirales_phage	3.4e-159	73.5
WP_046694463.1\|442600_443158_+\|head,protease	HK97 family phage prohead protease	A0A2H4JB68	uncultured_Caudovirales_phage	6.3e-71	73.7
WP_050078270.1\|443159_444362_+\|portal	phage portal protein	A0A2H4JFJ9	uncultured_Caudovirales_phage	5.4e-176	73.0
WP_025376816.1\|444358_444694_+\|head	phage head closure protein	A0A1W6JP44	Morganella_phage	2.6e-27	59.6
WP_046694465.1\|444690_444975_+\|head,tail	phage gp6-like head-tail connector protein	A0A2H4JD08	uncultured_Caudovirales_phage	8.0e-38	77.4
WP_046694466.1\|444974_445421_+	HNH endonuclease	A0A2H4JAS8	uncultured_Caudovirales_phage	6.5e-50	63.6
WP_154237413.1\|445398_445566_+	hypothetical protein	NA	NA	NA	NA
WP_046694467.1\|445695_446049_+\|terminase	phage terminase small subunit P27 family	A0A2H4JHS3	uncultured_Caudovirales_phage	1.8e-42	71.8
WP_046694468.1\|446035_447697_+\|terminase	terminase large subunit	A0A2H4JB64	uncultured_Caudovirales_phage	3.9e-273	80.7
WP_046694469.1\|447710_448280_+\|tail	tail assembly protein	A0A1B0VMI5	Pseudomonas_phage	2.3e-52	57.6
WP_046695640.1\|448298_448547_+	hypothetical protein	A0A1W6JPH4	Morganella_phage	4.7e-18	55.7
WP_002210061.1\|448703_449000_-	DNA-binding transcriptional regulator Fis	NA	NA	NA	NA
WP_019080089.1\|449024_449990_-\|tRNA	tRNA dihydrouridine synthase DusB	NA	NA	NA	NA
WP_046050121.1\|450449_451331_-	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA
WP_019080087.1\|451424_452879_-	sodium/pantothenate symporter	NA	NA	NA	NA
WP_019080086.1\|452868_453111_-	YhdT family protein	NA	NA	NA	NA
WP_004392390.1\|453318_454668_-	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA
WP_005163113.1\|454679_455144_-	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA
WP_005174343.1\|455301_455754_-	type II 3-dehydroquinate dehydratase	NA	NA	NA	NA
WP_005174342.1\|455962_456562_-	protein-methionine-sulfoxide reductase heme-binding subunit MsrQ	NA	NA	NA	NA
WP_019080085.1\|456561_457596_-	protein-methionine-sulfoxide reductase catalytic subunit MsrP	NA	NA	NA	NA
WP_019080084.1\|457749_458727_-	oxidoreductase	NA	NA	NA	NA
WP_019082211.1\|459011_460931_+	RNase E specificity factor CsrD	NA	NA	NA	NA
WP_002228205.1\|461265_462309_+	rod shape-determining protein MreB	F2Y0P3	Organic_Lake_phycodnavirus	6.0e-06	22.3
WP_005163136.1\|462408_463395_+	rod shape-determining protein MreC	NA	NA	NA	NA
WP_019080082.1\|463391_463880_+	rod shape-determining protein MreD	NA	NA	NA	NA
WP_046694470.1\|463893_464487_+	septum formation inhibitor Maf	NA	NA	NA	NA
WP_005174333.1\|464476_465946_+	ribonuclease G	NA	NA	NA	NA
WP_060722690.1\|465992_469868_+	AsmA2 domain-containing protein	NA	NA	NA	NA
WP_019080079.1\|469864_470725_+	carbon-nitrogen hydrolase family protein	NA	NA	NA	NA
WP_046694472.1\|470737_472183_+\|protease	metalloprotease TldD	NA	NA	NA	NA
WP_046694473.1\|472253_475391_-	RHS repeat protein	NA	NA	NA	NA
WP_046694474.1\|475574_475934_-	DUF2570 domain-containing protein	NA	NA	NA	NA
WP_046694475.1\|475930_476332_-	M15 family metallopeptidase	A9DET4	Yersinia_phage	5.4e-40	58.4
WP_046694476.1\|476343_476655_-\|holin	phage holin family protein	NA	NA	NA	NA
WP_046694477.1\|476732_481178_-	toxin	NA	NA	NA	NA
WP_052750725.1\|481238_487745_-	hypothetical protein	NA	NA	NA	NA
481843:481860	attR	NA	NA	NA	NA
WP_046694478.1\|487823_488690_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_019080077.1\|488943_489855_-	HTH-type transcriptional activator AaeR	NA	NA	NA	NA
WP_005174323.1\|490167_490371_+	AaeX family protein	NA	NA	NA	NA
WP_005174322.1\|490378_491314_+	p-hydroxybenzoic acid efflux pump subunit AaeA	NA	NA	NA	NA
WP_019082213.1\|491315_493271_+	p-hydroxybenzoic acid efflux pump subunit AaeB	NA	NA	NA	NA
WP_046050127.1\|493392_494886_+	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_046050128.1\|494983_495457_+	ribonuclease	NA	NA	NA	NA
WP_019082215.1\|495461_495728_+	barstar family protein	NA	NA	NA	NA
WP_005174310.1\|495780_496326_-	ribosome-associated protein	NA	NA	NA	NA
WP_019082216.1\|496494_497835_+\|protease	metalloprotease PmbA	NA	NA	NA	NA

DBSCAN-SWA_4

867351 : 878978

Morganella_phage(25.0%)

tRNA,integrase

attL 868678:868691|attR 871897:871910

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_019078980.1\|867351_868869_+\|tRNA	lysine--tRNA ligase	A0A2K9L3L6	Tupanvirus	6.6e-86	37.4
868678:868691	attL	NA	NA	NA	NA
WP_046694583.1\|869277_870492_+\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	1.6e-143	61.4
WP_046694584.1\|870636_870966_+	hypothetical protein	NA	NA	NA	NA
WP_046694585.1\|870984_871440_+	hypothetical protein	NA	NA	NA	NA
WP_038400474.1\|871660_871858_+	AlpA family transcriptional regulator	NA	NA	NA	NA
WP_154237414.1\|871857_872277_+	hypothetical protein	A0A1W6JPH9	Morganella_phage	1.0e-25	54.2
871897:871910	attR	NA	NA	NA	NA
WP_046694586.1\|872291_873134_+	antA/AntB antirepressor family protein	A0A0P0ZCA2	Stx2-converting_phage	5.9e-20	42.9
WP_046694587.1\|873389_873710_-	hypothetical protein	NA	NA	NA	NA
WP_046694588.1\|873918_874104_+	host cell division inhibitor Icd-like protein	NA	NA	NA	NA
WP_046694589.1\|874093_874294_+	hypothetical protein	A0A286S1P8	Klebsiella_phage	1.8e-07	51.7
WP_046694590.1\|874286_874493_+	hypothetical protein	NA	NA	NA	NA
WP_046694591.1\|874482_874701_+	hypothetical protein	NA	NA	NA	NA
WP_050322082.1\|874697_875330_+	hypothetical protein	A0A286S1S7	Klebsiella_phage	7.5e-36	41.7
WP_046694592.1\|875313_875844_+	hypothetical protein	NA	NA	NA	NA
WP_046695654.1\|875857_876211_+	hypothetical protein	A0A1B5FPL8	Escherichia_phage	7.9e-27	51.4
WP_046694593.1\|876203_878978_+	DUF927 domain-containing protein	A0A1W6JPG0	Morganella_phage	1.2e-292	57.4

DBSCAN-SWA_5

1957412 : 1964530

Cronobacter_phage(33.33%)

holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_046050763.1\|1957412_1958681_-	translesion error-prone DNA polymerase V subunit UmuC	F1C5A5	Cronobacter_phage	1.5e-155	63.5
WP_046050764.1\|1958680_1959037_-	translesion error-prone DNA polymerase V autoproteolytic subunit	F1C5A6	Cronobacter_phage	3.8e-21	44.8
WP_046050765.1\|1959432_1959771_-	hypothetical protein	NA	NA	NA	NA
WP_080343450.1\|1959746_1960247_-	lysozyme	A0A2H4JCH1	uncultured_Caudovirales_phage	1.8e-48	57.8
WP_019079757.1\|1960218_1960440_-\|holin	class II holin family protein	M9NZI9	Enterobacteria_phage	2.3e-16	66.2
WP_019083381.1\|1960519_1961356_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_019083380.1\|1961681_1962746_-	linear amide C-N hydrolase	M1HS66	Paramecium_bursaria_Chlorella_virus	2.6e-20	27.3
WP_046694896.1\|1963252_1964530_+	bifunctional O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase	A0A0B5JD48	Pandoravirus	3.4e-19	29.8

DBSCAN-SWA_6

2033675 : 2047289

Pectobacterium_phage(71.43%)

plate,transposase,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_019079703.1\|2033675_2034080_+	hypothetical protein	H9C1A3	Pectobacterium_phage	4.6e-55	80.6
WP_019079702.1\|2034082_2034472_+	hypothetical protein	H9C1A4	Pectobacterium_phage	1.5e-34	60.5
WP_046694908.1\|2034734_2035313_+	hypothetical protein	NA	NA	NA	NA
WP_102895904.1\|2035302_2035599_+	hypothetical protein	NA	NA	NA	NA
WP_046694910.1\|2035716_2037381_+	glycoside hydrolase family 104 protein	H9C1A7	Pectobacterium_phage	9.6e-139	49.7
WP_019079697.1\|2037380_2038049_+	hypothetical protein	H9C1A8	Pectobacterium_phage	6.7e-35	48.9
WP_046694911.1\|2038048_2038339_+	hypothetical protein	H9C1A9	Pectobacterium_phage	2.1e-25	58.3
WP_046694912.1\|2038331_2039225_+	hypothetical protein	H9C1B0	Pectobacterium_phage	6.0e-79	46.4
WP_046694913.1\|2039232_2039910_+	hypothetical protein	H9C1B1	Pectobacterium_phage	1.8e-67	57.1
WP_025378609.1\|2039982_2040333_+	hypothetical protein	H9C1B2	Pectobacterium_phage	2.2e-37	65.5
WP_046694914.1\|2040332_2041532_+\|plate	baseplate J/gp47 family protein	H9C1B3	Pectobacterium_phage	7.3e-149	66.0
WP_019079691.1\|2041524_2042169_+	DUF2612 domain-containing protein	H9C1B4	Pectobacterium_phage	5.0e-43	49.0
WP_046694915.1\|2042182_2043286_+	hypothetical protein	E5G6P0	Salmonella_phage	3.1e-08	54.4
WP_019079689.1\|2043299_2043770_+\|tail	tail fiber assembly protein	F1BUP0	Erwinia_phage	1.4e-39	48.1
WP_052750730.1\|2043855_2045820_-	acyltransferase	A0A193GZ69	Enterobacter_phage	1.3e-65	34.1
WP_042562584.1\|2046128_2047289_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	7.1e-40	37.6

DBSCAN-SWA_7

2056566 : 2062690

Tupanvirus(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_046050796.1\|2056566_2058306_-	ABC-F family ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	1.3e-37	25.8
WP_026018244.1\|2058816_2059236_-	helix-turn-helix domain-containing protein	K7PM35	Enterobacteria_phage	2.8e-15	32.8
WP_046050798.1\|2059636_2060281_+	CatB-related O-acetyltransferase	A0A2R8FE91	Brazilian_cedratvirus	7.5e-15	29.5
WP_019083270.1\|2061031_2061451_+	antitermination protein Q	K7PGW2	Enterobacterial_phage	3.1e-38	63.0
WP_005170265.1\|2061626_2061803_-	GhoT/OrtT family toxin	NA	NA	NA	NA
WP_005161370.1\|2062029_2062206_+	hypothetical protein	B6SD15	Bacteriophage	2.2e-14	60.7
WP_046050799.1\|2062207_2062690_+	lysozyme	A0A2H4JCH1	uncultured_Caudovirales_phage	3.8e-56	65.0

DBSCAN-SWA_8

2514621 : 2522453

Bacillus_phage(16.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_032908420.1\|2514621_2514918_+	zinc-ribbon domain and TM2 domain-containing protein	M4ZS56	Bacillus_phage	8.1e-17	68.8
WP_002211830.1\|2515130_2515427_-	integration host factor subunit alpha	A0A0H3UZA0	Geobacillus_virus	4.2e-13	40.0
WP_046695044.1\|2515431_2517819_-\|tRNA	phenylalanine--tRNA ligase subunit beta	A0A1L3IZU3	BeAn_58058_virus	1.1e-07	27.8
WP_019083037.1\|2517833_2518817_-\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2H4UW22	Bodo_saltans_virus	9.9e-35	38.0
WP_152414234.1\|2519165_2519213_-	pheST operon leader peptide PheM	NA	NA	NA	NA
WP_004393357.1\|2519281_2519638_-	50S ribosomal protein L20	NA	NA	NA	NA
WP_004713020.1\|2519675_2519873_-	50S ribosomal protein L35	NA	NA	NA	NA
WP_011816226.1\|2519969_2520521_-	translation initiation factor IF-3	A0A2L0UZ54	Agrobacterium_phage	3.4e-16	33.7
WP_005170086.1\|2520524_2522453_-\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	7.4e-127	37.1

DBSCAN-SWA_9

2637836 : 2752948

129

Pectobacterium_phage(17.95%)

tRNA,transposase,integrase,portal,capsid,plate,tail,terminase,head,lysis

attL 2706428:2706443|attR 2756478:2756493

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_046051037.1\|2637836_2638463_-\|tRNA	serine-tRNA(Ala) deacylase AlaX	NA	NA	NA	NA
WP_046695076.1\|2638552_2639485_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_019079201.1\|2639535_2640405_-	SAM-dependent methyltransferase TehB	NA	NA	NA	NA
WP_046695077.1\|2640549_2640864_-	cytochrome c	NA	NA	NA	NA
WP_046695078.1\|2640863_2641352_-	TlpA family protein disulfide reductase	NA	NA	NA	NA
WP_005164408.1\|2641341_2642055_-	ABC transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	1.4e-17	31.7
WP_172653834.1\|2642058_2643171_-	ABC transporter permease	NA	NA	NA	NA
WP_046051040.1\|2643205_2644498_-	ABC transporter permease	NA	NA	NA	NA
WP_046695079.1\|2644500_2645904_-	DUF2318 domain-containing protein	NA	NA	NA	NA
WP_004390794.1\|2646039_2646567_-	iron transporter	NA	NA	NA	NA
WP_046695080.1\|2646647_2648585_-	FTR1 family iron permease	NA	NA	NA	NA
WP_046695081.1\|2648758_2649277_+	hypothetical protein	NA	NA	NA	NA
WP_046695082.1\|2649409_2651050_-	MFS transporter	NA	NA	NA	NA
WP_019079192.1\|2651161_2652169_-	glutaminase A	NA	NA	NA	NA
WP_046695083.1\|2652609_2653389_-	hydroxypyruvate isomerase family protein	NA	NA	NA	NA
WP_046695084.1\|2653391_2654015_-	aldolase	A0A077SK32	Escherichia_phage	8.3e-88	76.7
WP_046695085.1\|2654011_2655274_-	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	2.5e-139	61.5
WP_019079188.1\|2655626_2656406_+	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	3.5e-83	64.3
WP_046695086.1\|2656649_2658326_+	two-component system sensor histidine kinase DcuS	NA	NA	NA	NA
WP_019079186.1\|2658318_2659038_+	two-component system response regulator DcuR	NA	NA	NA	NA
WP_046695087.1\|2659149_2660508_-	2-hydroxycarboxylate transporter family protein	A0A140XAH4	Dickeya_phage	6.6e-29	68.8
WP_046695088.1\|2661582_2663097_+	L-asparagine permease	NA	NA	NA	NA
WP_005164450.1\|2663245_2663599_-	DUF488 family protein	NA	NA	NA	NA
WP_046695089.1\|2663631_2664090_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_046695090.1\|2664344_2664737_-	VOC family protein	NA	NA	NA	NA
WP_046695091.1\|2664914_2665940_+	ROK family protein	NA	NA	NA	NA
WP_046695092.1\|2666177_2667350_+	MFS transporter	NA	NA	NA	NA
WP_046695093.1\|2667530_2668349_+	HAD family hydrolase	NA	NA	NA	NA
WP_019083256.1\|2669878_2670187_-\|transposase	transposase	Q716C1	Shigella_phage	3.4e-18	45.0
WP_019082965.1\|2670754_2672284_-	recombinase family protein	NA	NA	NA	NA
WP_046695094.1\|2672761_2675821_+	autotransporter outer membrane beta-barrel domain-containing protein	A0A2L1IV18	Escherichia_phage	1.2e-105	48.4
WP_072083000.1\|2675879_2676320_-\|tail	tail fiber assembly protein	Q7Y3Y8	Yersinia_phage	1.1e-20	53.0
WP_046051098.1\|2676328_2678140_-	hypothetical protein	A0A1L7DQU7	Yersinia_phage	2.5e-39	43.8
WP_046051099.1\|2678165_2678870_-	hypothetical protein	A0A2D2W721	Pectobacterium_phage	6.9e-06	25.2
WP_019079554.1\|2678869_2679136_-	hypothetical protein	NA	NA	NA	NA
WP_046695095.1\|2679138_2682279_-	host specificity protein J	Q5G8W0	Enterobacteria_phage	0.0e+00	67.0
WP_020424083.1\|2682288_2682816_-\|tail	tail assembly protein	H6WRW3	Salmonella_phage	6.3e-44	56.3
WP_080343457.1\|2682758_2683484_-	C40 family peptidase	Q5G8W2	Enterobacteria_phage	1.3e-100	67.9
WP_046695097.1\|2683483_2684188_-\|tail	phage minor tail protein L	H6WRW1	Salmonella_phage	1.0e-105	77.4
WP_046695098.1\|2684315_2684870_+	hypothetical protein	NA	NA	NA	NA
WP_046695099.1\|2684883_2685237_-\|tail	phage tail protein	I6RSL7	Salmonella_phage	1.0e-45	75.2
WP_046695100.1\|2685249_2688618_-	tape measure protein	Q5G8W8	Enterobacteria_phage	4.7e-193	51.1
WP_046695101.1\|2688610_2689300_-	hypothetical protein	A0A1W6JNX2	Morganella_phage	5.3e-51	46.3
WP_046051102.1\|2690221_2690572_-	hypothetical protein	NA	NA	NA	NA
WP_011816460.1\|2690981_2691299_-	hypothetical protein	NA	NA	NA	NA
WP_046051103.1\|2691510_2691858_-	TonB family protein	NA	NA	NA	NA
WP_046051104.1\|2692017_2692767_-	Ig domain-containing protein	G0ZNE6	Cronobacter_phage	4.0e-60	54.0
WP_046051105.1\|2692791_2693175_-	hypothetical protein	G0ZNE4	Cronobacter_phage	9.1e-45	66.1
WP_046051106.1\|2693171_2693540_-	hypothetical protein	F1C5E3	Cronobacter_phage	1.2e-41	68.0
WP_046051107.1\|2693541_2693892_-	hypothetical protein	G0ZNE2	Cronobacter_phage	3.3e-25	50.9
WP_154235943.1\|2693821_2694016_-	hypothetical protein	NA	NA	NA	NA
WP_046051108.1\|2694201_2694573_-	hypothetical protein	F1C5E2	Cronobacter_phage	1.5e-47	77.5
WP_046051109.1\|2694575_2694941_-	hypothetical protein	NA	NA	NA	NA
WP_046695103.1\|2694950_2696027_-	hypothetical protein	F1C5E1	Cronobacter_phage	2.4e-159	76.0
WP_046695104.1\|2696037_2696478_-	hypothetical protein	F1C5E0	Cronobacter_phage	1.9e-41	63.0
WP_046695105.1\|2696481_2697669_-	DUF2213 domain-containing protein	F1C5D9	Cronobacter_phage	1.3e-94	48.3
WP_046695106.1\|2697742_2697934_-	hypothetical protein	NA	NA	NA	NA
WP_080343489.1\|2697991_2698873_-\|head	phage head morphogenesis protein	F1C5D8	Cronobacter_phage	4.2e-109	65.1
WP_046695108.1\|2698910_2700368_-	DUF1073 domain-containing protein	F1C5D7	Cronobacter_phage	4.4e-164	66.7
WP_046051114.1\|2700378_2701851_-\|terminase	terminase	A0A1W6JNY3	Morganella_phage	2.8e-251	82.9
WP_046051115.1\|2701850_2702453_-	hypothetical protein	G8C7P2	Escherichia_phage	7.1e-68	73.0
WP_046695109.1\|2703156_2703489_-	DUF2570 domain-containing protein	NA	NA	NA	NA
WP_046051117.1\|2703481_2704015_-	lysozyme	H6WRZ4	Salmonella_phage	1.3e-68	67.8
WP_046051118.1\|2704014_2704281_-	hypothetical protein	Q7Y3V4	Yersinia_phage	7.0e-36	78.4
WP_046051119.1\|2704720_2705293_-	DUF1133 family protein	NA	NA	NA	NA
WP_046051120.1\|2705289_2705574_-	DUF1364 domain-containing protein	H9C174	Pectobacterium_phage	2.0e-36	77.7
WP_046051121.1\|2705582_2706176_-	DUF1367 family protein	H9C173	Pectobacterium_phage	1.7e-61	55.8
WP_046051122.1\|2706279_2706543_-	hypothetical protein	NA	NA	NA	NA
2706428:2706443	attL	NA	NA	NA	NA
WP_046051123.1\|2706585_2706939_-	hypothetical protein	H9C172	Pectobacterium_phage	9.0e-31	59.0
WP_046051124.1\|2706935_2709101_-	DNA methyltransferase	H9C171	Pectobacterium_phage	4.2e-219	51.1
WP_046051125.1\|2709097_2709604_-	hypothetical protein	L0ASX3	Klebsiella_phage	3.2e-05	37.2
WP_046051126.1\|2709600_2709852_-	hypothetical protein	NA	NA	NA	NA
WP_046051127.1\|2709856_2710237_-	hypothetical protein	NA	NA	NA	NA
WP_046695110.1\|2710281_2711643_-	replicative DNA helicase	K7P852	Enterobacteria_phage	1.3e-106	44.4
WP_046051129.1\|2711639_2712614_-	helix-turn-helix domain-containing protein	A0A1W6JP36	Morganella_phage	4.3e-38	62.1
WP_046695111.1\|2712616_2712841_-	hypothetical protein	H9C163	Pectobacterium_phage	9.8e-23	66.2
WP_046051131.1\|2712857_2713322_-\|tRNA	tRNA-(guanine-N1)-methyltransferase	H9C162	Pectobacterium_phage	1.8e-34	56.1
WP_046051132.1\|2713382_2713568_-	Cro/Cl family transcriptional regulator	H9C161	Pectobacterium_phage	2.1e-18	68.9
WP_172666731.1\|2713660_2714323_+	LexA family transcriptional regulator	H9C160	Pectobacterium_phage	8.9e-88	70.6
WP_154235942.1\|2714563_2714719_+	hypothetical protein	NA	NA	NA	NA
WP_046051133.1\|2715029_2715365_+	hypothetical protein	NA	NA	NA	NA
WP_046695112.1\|2715420_2717619_+	hypothetical protein	H9C157	Pectobacterium_phage	5.9e-128	38.2
WP_046051135.1\|2717615_2718116_+	siphovirus Gp157 family protein	H9C156	Pectobacterium_phage	4.5e-60	74.8
WP_019082908.1\|2718161_2718344_+	hypothetical protein	NA	NA	NA	NA
WP_046051137.1\|2718556_2718793_+	DUF4224 domain-containing protein	H9C153	Pectobacterium_phage	2.9e-09	43.5
WP_046695113.1\|2718782_2719799_+\|integrase	tyrosine-type recombinase/integrase	H9C152	Pectobacterium_phage	1.8e-135	67.5
WP_046695114.1\|2720324_2720963_-	hypothetical protein	NA	NA	NA	NA
WP_046695115.1\|2720959_2722942_-	ATP-binding domain-containing protein	NA	NA	NA	NA
WP_046695116.1\|2723414_2724407_+	hypothetical protein	NA	NA	NA	NA
WP_046695117.1\|2724524_2725559_-\|integrase	tyrosine-type recombinase/integrase	Q1I119	Pasteurella_virus	1.3e-117	62.0
WP_046695118.1\|2725880_2726450_-	phage repressor protein CI	Q6K1G0	Salmonella_virus	5.4e-25	38.0
WP_080343458.1\|2726562_2726760_+	DNA-binding protein	Q1I116	Pasteurella_virus	2.8e-05	39.3
WP_046695119.1\|2726814_2727324_+	phage regulatory CII family protein	E5G6L3	Salmonella_phage	2.1e-44	52.4
WP_005163725.1\|2727333_2727519_+	DUF2724 domain-containing protein	NA	NA	NA	NA
WP_046695120.1\|2727530_2727842_+	hypothetical protein	NA	NA	NA	NA
WP_046695121.1\|2727907_2728180_+	DUF2732 family protein	A0A1S6L021	Salmonella_phage	2.0e-06	45.8
WP_046695122.1\|2728179_2728485_+	DUF5405 family protein	NA	NA	NA	NA
WP_020282762.1\|2728495_2728759_+	DUF5405 family protein	NA	NA	NA	NA
WP_046695123.1\|2728755_2731035_+	replication endonuclease	Q858T4	Yersinia_virus	4.5e-240	57.1
WP_046695124.1\|2731054_2731414_+	hypothetical protein	H9C172	Pectobacterium_phage	1.4e-18	43.4
WP_046695125.1\|2731551_2731746_+	hypothetical protein	NA	NA	NA	NA
WP_046695699.1\|2732152_2732431_-	hypothetical protein	NA	NA	NA	NA
WP_014609181.1\|2732543_2733581_-\|portal	phage portal protein	F1BUR7	Erwinia_phage	3.0e-159	77.8
WP_046695127.1\|2733577_2735350_-\|terminase	terminase ATPase subunit family protein	F1BUR2	Erwinia_phage	4.5e-288	81.3
WP_046695128.1\|2735500_2736355_+\|capsid	GPO family capsid scaffolding protein	Q01088	Escherichia_phage	4.5e-92	61.8
WP_046695129.1\|2736431_2737661_+\|capsid	phage major capsid protein, P2 family	F1BUQ8	Erwinia_phage	8.9e-150	73.5
WP_046695130.1\|2737664_2738324_+\|terminase	terminase endonuclease subunit	F1BUQ7	Erwinia_phage	2.5e-82	70.3
WP_046695131.1\|2738423_2738897_+\|head	head completion/stabilization protein	M1SNN6	Escherichia_phage	1.7e-40	57.4
WP_046695132.1\|2738896_2739100_+\|tail	tail protein X	E5G6M9	Salmonella_phage	4.5e-19	64.2
WP_046695133.1\|2739102_2739312_+	hypothetical protein	NA	NA	NA	NA
WP_046695134.1\|2739295_2739802_+	lysozyme	A0A218M4K3	Erwinia_phage	1.5e-55	62.5
WP_046695135.1\|2739803_2740220_+\|lysis	LysB family phage lysis regulatory protein	F1BUQ1	Erwinia_phage	5.0e-28	51.8
WP_046695136.1\|2740315_2740771_+\|tail	phage tail protein	F1BUP9	Erwinia_phage	2.9e-45	62.0
WP_046695137.1\|2740767_2741217_+	phage virion morphogenesis protein	O80313	Escherichia_phage	2.1e-48	65.1
WP_046695138.1\|2741279_2742011_+	hypothetical protein	NA	NA	NA	NA
WP_046695139.1\|2742094_2742736_+\|plate	phage baseplate assembly protein V	A0A0M4S6F6	Salmonella_phage	8.6e-72	64.5
WP_046695140.1\|2742732_2743083_+	GPW/gp25 family protein	F1BUP4	Erwinia_phage	1.2e-38	67.2
WP_046695141.1\|2743087_2743996_+\|plate	baseplate assembly protein	F1BUP3	Erwinia_phage	2.1e-124	79.5
WP_046695142.1\|2743988_2744597_+\|tail	phage tail protein I	F1BUP2	Erwinia_phage	4.6e-91	79.1
WP_046695143.1\|2744593_2745757_+\|tail	phage tail protein	A0A0M3ULH6	Salmonella_phage	1.6e-79	55.2
WP_046695144.1\|2745760_2746246_+\|tail	phage tail protein	F1BUP0	Erwinia_phage	9.5e-31	43.7
WP_046695145.1\|2746371_2747541_+\|tail	phage tail sheath protein	F1BUU3	Erwinia_phage	1.2e-183	79.9
WP_019079139.1\|2747554_2748070_+\|tail	phage major tail tube protein	S4TNZ0	Salmonella_phage	8.8e-67	71.9
WP_046695146.1\|2748122_2748434_+\|tail	phage tail assembly protein	F1BUU0	Erwinia_phage	9.4e-24	61.1
WP_004875948.1\|2748466_2748589_+\|tail	GpE family phage tail protein	Q858U8	Yersinia_virus	2.0e-09	71.1
WP_046695147.1\|2748581_2750990_+\|tail	phage tail tape measure protein	Q7Y4C8	Escherichia_virus	1.5e-132	41.0
WP_046695148.1\|2750992_2751478_+\|tail	phage tail protein	S4TUC3	Salmonella_phage	2.0e-49	61.0
WP_046695149.1\|2751474_2752641_+	phage late control D family protein	A0A218M4J7	Erwinia_phage	6.7e-139	66.1
WP_071843381.1\|2752732_2752948_+	DNA-binding transcriptional regulator	A0A0F7LDQ9	Escherichia_phage	4.8e-19	55.6
2756478:2756493	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage