CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP006003	Myxococcus fulvus 124B02, complete genome	32 crisprs	csa3,RT,WYL,cas3,Cas9_archaeal,DEDDh,2OG_CAS,csx1,DinG,PD-DExK,cas2,cas1,cas4,cas7,cas8c,cas5	1	42	3	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP006003_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP006003_1

34004-34108

Orphan

Consensus_repeat	Method
GGCGTGCGCGCGGGACCAGGGGAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP006003_1

>merge|NZ_CP006003|1|34004-34108|CRISPRCasFinder
GGCGTGCGCGCGGGACCAGGGGACTGCGCGGGTGAGCGCGTGGAGCCCGAGGACGTCAGCGCCGCCGGGGGAGGCGGAGGCGGCGTGCGCGCGGGACCGGGGGAC

>NZ_CP006003|1|1|34004-34108|CRISPRCasFinder
GGCGTGCGCGCGGGACCAGGGGAC	TGCGCGGGTGAGCGCGTGGAGCCCGAGGACGTCAGCGCCGCCGGGGGAGGCGGAGGC
GGCGTGCGCGCGGGACCGGGGGAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP006003.1\|WP_052770691.1\|47312_47741_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046710236.1\|24447_24738_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046710245.1\|39560_40058_-\|YkgJ-family-cysteine-cluster-protein	unknown	unknown	gnl\|CDD\|308985
NZ_CP006003.1\|WP_046710232.1\|18500_20375_-\|esterase	unknown	unknown	gnl\|CDD\|273828
NZ_CP006003.1\|WP_052771406.1\|38697_39441_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377965
NZ_CP006003.1\|WP_046710243.1\|36788_38684_+\|ribonuclease-R	unknown	unknown	gnl\|CDD\|273947
NZ_CP006003.1\|WP_046710239.1\|30590_32054_-\|tetratricopeptide-repeat-containing-protein	unknown	unknown	gnl\|CDD\|276808
NZ_CP006003.1\|WP_046710242.1\|36245_36599_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046710247.1\|46013_47012_-\|Maebl	unknown	unknown	gnl\|CDD\|350237
NZ_CP006003.1\|WP_046710231.1\|17663_18461_-\|SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|226608
NZ_CP006003.1\|WP_082165544.1\|21842_23456_-\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP006003.1\|WP_046710240.1\|32201_32903_-\|DUF2807-domain-containing-protein	unknown	unknown	gnl\|CDD\|371327
NZ_CP006003.1\|WP_046710246.1\|40642_42682_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046710237.1\|25200_27390_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_082164891.1\|27368_28931_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046710233.1\|20805_21771_-\|glutathione-synthase	unknown	unknown	gnl\|CDD\|235371
NZ_CP006003.1\|WP_046710235.1\|24129_24426_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046710249.1\|49022_49799_-\|haloacid-dehalogenase	unknown	unknown	gnl\|CDD\|378932
NZ_CP006003.1\|WP_063789749.1\|35615_36041_-\|XRE-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP006003.1\|WP_046710248.1\|47812_48907_-\|fructose-bisphosphate-aldolase-class-II	unknown	unknown	gnl\|CDD\|181691

Protein	Function_ID	Function_description	E-value
NZ_CP006003.1\|WP_046710245.1\|39560_40058_-\|YkgJ-family-cysteine-cluster-protein	gnl\|CDD\|308985	pfam03692, CxxCxxCC, Putative zinc- or iron-chelating domain. This family of proteins contains 8 conserved cysteines. It has in the past been annotated as being one of the complex of proteins of the flagellar Fli complex. However this was due to a mis-annotation of the original Salmonella LT2 Genbank entry of 'fliB'. With all its conserved cysteines it is possibly a domain that chelates iron or zinc ions.	0.000813859
NZ_CP006003.1\|WP_046710232.1\|18500_20375_-\|esterase	gnl\|CDD\|273828	TIGR01840, poly3-hydroxybutyrate_depolymerase_A_precursor, esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi. [Fatty acid and phospholipid metabolism, Degradation].	1.25285e-73
NZ_CP006003.1\|WP_052771406.1\|38697_39441_-\|hypothetical-protein	gnl\|CDD\|377965	pfam08239, SH3_3, Bacterial SH3 domain.	0.0047202
NZ_CP006003.1\|WP_046710243.1\|36788_38684_+\|ribonuclease-R	gnl\|CDD\|273947	TIGR02063, Ribonuclease_R, ribonuclease R. This family consists of an exoribonuclease, ribonuclease R, also called VacB. It is one of the eight exoribonucleases reported in E. coli and is broadly distributed throughout the bacteria. In E. coli, double mutants of this protein and polynucleotide phosphorylase are not viable. Scoring between trusted and noise cutoffs to the model are shorter, divergent forms from the Chlamydiae, and divergent forms from the Campylobacterales (including Helicobacter pylori) and Leptospira interrogans. [Transcription, Degradation of RNA].	6.05079e-143
NZ_CP006003.1\|WP_046710239.1\|30590_32054_-\|tetratricopeptide-repeat-containing-protein	gnl\|CDD\|276808	sd00008, TPR_YbbN, C-terminal Tetratricopeptide repeat (TPR) region of YbbN and similar motifs. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. YbbN is a thioredoxin-like protein containing two tandem TPR repeats at the C-terminus, separated by two alpha helices. Its N-terminal thioredoxin-like domain is not a functional oxidoreductase. It functions in heat stress response and DNA synthesis as a chaperone or co-chaperone.	1.43647e-05
NZ_CP006003.1\|WP_046710247.1\|46013_47012_-\|Maebl	gnl\|CDD\|350237	cd11297, PIN_LabA-like_N_1, uncharacterized subfamily of N-terminal LabA-like PIN domains. This N-terminal LabA-like PIN domain is found in a well conserved group of mainly bacterial proteins with no defined function, which contain a C-terminal LabA_like_C domain. LabA from Synechococcus elongatus PCC 7942, (which does not contain this C-terminal domain), has been shown to play a role in cyanobacterial circadian timing. The LabA-like C-terminal domains characteristic of this subfamily may be related to the LOTUS domain family (which also co-occurs with LabA-like N-terminal domains). The function of the N-terminal domain is unknown. The LabA-like PIN domain family also includes the N-terminal domain of limkain b1, a human autoantigen localized to a subset of ABCD3 and PXF marked peroxisomes. Other members are the LabA-like PIN domains of human ZNF451, uncharacterized Bacillus subtilis YqxD and Escherichia coli YaiI. Curiously, a gene labeled NicB from Pseudomonas putida S16, which is described as a putative NADH-dependent hydroxylase involved in the microbial degradation of nicotine also falls into the LabA-like PIN family. The PIN (PilT N terminus) domain belongs to a large nuclease superfamily. The structural properties of the PIN domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions; in some members, additional metal coordinating residues can be found while some others lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	5.26921e-43
NZ_CP006003.1\|WP_046710231.1\|17663_18461_-\|SAM-dependent-methyltransferase	gnl\|CDD\|226608	COG4123, COG4123, Predicted O-methyltransferase [General function prediction only].	2.47708e-57
NZ_CP006003.1\|WP_082165544.1\|21842_23456_-\|serine/threonine-protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	2.30244e-84
NZ_CP006003.1\|WP_046710240.1\|32201_32903_-\|DUF2807-domain-containing-protein	gnl\|CDD\|371327	pfam10988, DUF2807, Putative auto-transporter adhesin, head GIN domain. This bacterial family of proteins shows structural similarity to other pectin lyase families. Although structures from this family align with acetyl-transferases, there is no conservation of catalytic residues found. It is likely that the function is one of cell-adhesion. In Structure 3jx8, it is interesting to note that the sequence of contains several well defined sequence repeats, centred around GSG motifs defining the tight beta turn between the two sheets of the super-helix; there are 8 such repeats in the C-terminal half of the protein, which could be grouped into 4 repeats of two. It seems likely that this family belongs to the superfamily of trimeric auto-transporter adhesins (TAAs), which are important virulence factors in Gram-negative pathogens. In the case of Parabacteroides distasonis, which is a component of the normal distal human gut microbiota, TAA-like complexes probably modulate adherence to the host (information derived from TOPSAN).	6.50557e-37
NZ_CP006003.1\|WP_046710233.1\|20805_21771_-\|glutathione-synthase	gnl\|CDD\|235371	PRK05246, PRK05246, glutathione synthetase; Provisional.	1.45706e-144
NZ_CP006003.1\|WP_046710249.1\|49022_49799_-\|haloacid-dehalogenase	gnl\|CDD\|378932	pfam12710, HAD, haloacid dehalogenase-like hydrolase.	3.04711e-13
NZ_CP006003.1\|WP_063789749.1\|35615_36041_-\|XRE-family-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	3.83882e-10
NZ_CP006003.1\|WP_046710248.1\|47812_48907_-\|fructose-bisphosphate-aldolase-class-II	gnl\|CDD\|181691	PRK09196, PRK09196, fructose-bisphosphate aldolase class II.	0

>NZ_CP006003.1|WP_046710240.1|32201_32903_-|DUF2807-domain-containing-protein
MKTARKSLLVPLMMFAGSAWAADAQTRDVPDFHSIELSHGIKAELKVGPKSVRVEGPADLVSRLELKVEDGELATKMERKGILNSFNGSKIRLFITVPRLEEVTVSGGGSVEGEVATSEDFSIEASGGASIDLRGIDTRKLDLEVSGGGTVQLEGRAKQLDIEASGGAVVKAMKLAGLRDLDVEASGGAQVEADPSESLEVEATGGTTVKCVSRPNRAQVQASGGSRVLYAKD
>NZ_CP006003.1|WP_046710239.1|30590_32054_-|tetratricopeptide-repeat-containing-protein
MTDPIPPPSSQGTSGRRAAVWSGVGLAVALAAGGALYVRSARAPSHAHDEHGPHDGHAHPELPTPKGPRAVTYTASPEVLRHTDRAARFAASGDAKKARESLGEALMLAPKHAPALLVHVCLALQEGNDAEAAEVLERLKAEAPGSPEVALLEALRERRRAPDAGTWQQAFRDAWVQLGRPDFRQSELLPGATPLPPDPVLVDWEKAAWARATSDDTRLRLALATRKLEPEQALFLLNQVPRLEDPDLYVAVRDALRGEALPESEYERARTVFREKLEALVRAHPRSMQLQLLLLLGDTESGSELTAAEIDALEKVAALPAWRETSFHDGYVRSRELLREVGVPDASAAAMAVSKRVLGERGTWILRTRNVGTRGSLSPEGLKRLGRITRDIGASLVRQPTLVERMAGLQLVRGGTQDMGDEAGRALALNQIEALEQTLKTFNQTALERWPVAALTEELLMEITRDEVTWLEGFVAKAPAGTAKARP
>NZ_CP006003.1|WP_082164891.1|27368_28931_-|hypothetical-protein
MAVRAVRARADAGQAACAGRGAELAGWRVAWHGAGSGGAARGGVAVSAGARTFEARVALFQEASWDDTFHEEELNEARDALPHASTEALHGFVLRQRACRLSLGLLADFYHVNPCRMAQVHLLAASAVTLGRFWGVSEPFARLGAAVMPVDETGLPRTPEWSAYASACAEGLPMEVRDERWIEAHMVDVARGRELGHEAAFLEEARAHEREPLWRLLVQHVEMTLGARFFDQHALAGAVPGESAIAHGLALSVVRLTSAGWVLLRHYAWATLRALCLPRWHRAPGLVGERRAAWLLLASFLTAWTTAGVYRRGVKALHRGQRTRPSDAWSLLASAMGPEVSRVDERVIRFYANPGAWNVRASVTFSSRTARMLAWVATRLSGQGLFEHGARTFPGRFRTFRRADGSMHFVRELYCDGALRSFDSDFVLRGNQLHEVFVEHGLDLALDVSVLDDGGIRLRGGTLRWHGLVLPPVGRGVEFRIIPSRADPTRVDIIGTFSWSTSSRAPLGCIHYEAQWSAPS
>NZ_CP006003.1|WP_046710237.1|25200_27390_+|hypothetical-protein
MARATSTGGAGWAVIVMAVVLGTGPVACREDPPLVGAQGRLRLSVDRLDFPFAYPGGTREAEVRVLNAGRAPLDVTWTAVEAPFSLVEGLPSRVGVEEVPVRVRFSPRAIGTFESRLVGTASDGGRVELVLAGEARPTPECVAVVCATSTFDPVTERCVETVSPDGTACNPGSACLTMATCQQGRCRGQERPCDDGNACTTDACHALDGCRSVPAPPCPGGGPCQVGTCDPKLGCGLADAPDGTFCGTERGCDAADVCIEGACARRDLPDGFVCASASPCQAEGRCRGPVCERPAAVTLAPDWSLDAAAYPRNLHDLLVGPEGDVTLSGFYESALLDAAAPTPMLSRDAARRCMLWNDRLLCMDLPEDGTVSLMERYTGVPRWTFTLGDARPDIRQRTETLFLARLAVMAPDRLAALFEAYPAGERRETLCRMYFLVVLDAFGQMVSAQELTDPLLSECNHPHPFGVVSDAAGDLYVSFSQTLNVGAPLHAGAPSLLMAFSSDGVPRWRKSQGQRAGELAVVDGLLFAERGAQALRTADGSVAGTIPQVFGRVVATRERLVPSAPGTTVNVSDEGNAPAATQLQGFALPSLSPVWTYSLRSGQSLTTKELRLATWPETPGLPPRTLVLTTATDADDAQLLVGVRVSDGSEAFQCRLDYEARTMPQLLELAPGALLMMDGAQTCGECDPPFASSQARFQRFPMPGLLPANEPWPGTFGGPGHDHHEGADH
>NZ_CP006003.1|WP_046710236.1|24447_24738_-|hypothetical-protein
MTSVADTGSPSSQAFTVLIPRSLQGTVDGLTPKTRQALLSELFRMAALAHQERGLLPASAPYALNLDFDECHVTVEMDPSRARLTLAGLSRARALG
>NZ_CP006003.1|WP_046710235.1|24129_24426_-|hypothetical-protein
MSRRAGYEESWDLTYLVEQLRELISRDLQLDDALAEELEDTLARLVLRNQRLRMLQRMVNAERSAEDLEVLRNALEYTDRELLTGLPGLLERLRTALT
>NZ_CP006003.1|WP_082165544.1|21842_23456_-|serine/threonine-protein-kinase
MAELFLGFTSGPGGFRKYVVVKRILPDARDNEQFERMFLDEARITAAFNHPNIAQVFDLGQEEDGLFLAMEFIAGQNLNQITSACLRHHRPVPLGFTLSVARDVCMALHYAHTFTAPSGDPSPVIHRDVAQKNIMVTYDGMVKLLDFGIAKAKNSLERTHAGTVKGTTGYMSPEQVRGEKLDGRSDLFSVGVMLHEMLTGARLFAGKTERDEMMKILEAPIPWPSHVAPHVSEQISKVVMQALERSREKRFANGRDMARALEAAAGTLMQDAEHRASLMREMFAERMAATRALLESVDGTASSLMVDSAKRALRKDDGPYLPVREEMATPRSGNTPMKGSKKPSRKVSTVKTDVPLPPLESDELTPAQKLRSNVLWGLLLLGILVGGIYGAVAVSRMMDDSATMVPVREEEPPDARLRPIEPGPMMGNLGPAGTDEPEPAPKNVPSQKEPAEGSPKPERPKPARATGKLTFHITGQSAPVYLGGKKLGVTPLLGVAVPAGKHTLKIVDPQGRSRSLPVVIDAGETTVRNFDSWQDLP
>NZ_CP006003.1|WP_046710233.1|20805_21771_-|glutathione-synthase
MAPLTLGFLMDPLETVRVDHDSTFALMLEAQKRGHRVVYFEQGWLRFNGRVAEARMRHVTVRRELGRHFDVLDEAPRELSTVDVLFLRKDPPVDAEFLHATQLVELCGDRPPVYINDPAGIRDANEKLFCLRYPDLMPDTRITRELPVLLDFIASNAQGTILKPVDGFGGKGILFLAPGDRNARSAAELLTSGGREAVVAQAYIPESRQGDKRIILVDGEPVGGVLRVPSGDDHRGNMAAGGTPHKAVLSARDLEICERLKPELRKRGLLLVGIDVLGDYLTEVNVTSPTGLVEANHLDDVCIEARVIDVAERLAARRPKA
>NZ_CP006003.1|WP_046710232.1|18500_20375_-|esterase
MSSWRSRLSSTCFTFTVALGLGALGCGGTDVVVPAPGDSVLDSSEQALTQVTGFGSNPGNLLMFRHVPANMPANAPLVVVLHGCTQNATGMELGGWTAAANVYKFYAVYPQQQGSNSGTSCFNWYEIGDTTRDAGEALSIKQMVDAMKATYSIDASRVYVTGFSAGGYMASSLLAVYPDVFSAGAINAGGPHRCSTSVNAAFTCMSGLDKTPAAWGDLARSGHPSHAGPRPPVSIWYGTSDFTVRPMNGTEAMEQWTNVHGIDQTPDTTETVGGFPHKVYRDGAGRALVETWELTGMGHAVAFDAQFNFPGSTTACGSVGAYVTDVNLCSVYHQAKFFGLTGGGSEPGGDTTPPTVNVTSPASGATVSGTVTVTVSATDAVGVARVELLVDGTPVATDTVAPYELAWDSRTVANGAHTLGARAYDAAGNAATDNDTSVTVDNAGVPPAPVTVSFTSIAAEDGYLKANADGSGAVLGTLTNLALGRGTDGKYNRSFLSFDTSALPDGATVTRAFLTVSYSSGSGDPWSTPSGNTLVIDVKTGTFNAASTEGADWAAAADASAVAGIERFTSGARASADFSGAGLGAINVAGRTQLRLRFSQEQTATQYLFVRDSANAVLTVVYTP
>NZ_CP006003.1|WP_046710231.1|17663_18461_-|SAM-dependent-methyltransferase
MRAWRPPVTDFASQPGPDETLDSIGTSGVRVFQRRDGYRFTLDAVLLAAFAATESTQGSGRILELGAGSGVVSLLLVKQFGLGPVDALEVQPAVHARLARAVALNDCESRVRPVLGDLRRIREQVTGGGYVQVVSNPPFRVADAGVRSPDDERAISKSEVACDARDVVSAARYALAPGGLVSLVYPAARAAEVLGLLAQSKLHPRMLRFVHSRVEAPATRFLVQAVRDRDRGLTVRPPLVVHGEGPGGYSAEVAALMDPPLSEQM
>NZ_CP006003.1|WP_063789749.1|35615_36041_-|XRE-family-transcriptional-regulator
MKTELGIHLGMSARTARRNMGLTQAVVAERLGVAREVYARLERGHMLPSLHTLKGLCTVLRVPPHQLLALDASIETPPGRKRPPPTPRVESTALVDLRKNLRGLSRSDLRLLNALAATLPATPPRRHAAPEPDIKNSLKSA
>NZ_CP006003.1|WP_046710242.1|36245_36599_+|hypothetical-protein
MAMKTVWFDFENTRDTPVELVMEPWGMPHTVQPGGRLDIACEGPEEGELQVERHAEGHVTLFAWAGATYRVLEGGKEVYAESLTFPGMPPGVSAKRMVETLFGSFEQRRAMRDKPED
>NZ_CP006003.1|WP_046710243.1|36788_38684_+|ribonuclease-R
MDTPVSPRTVTGRIDVHPRGFGFLTVQAPGSHEVLSAFIPPPDLNPLFAGDIVTGTVTAAADGRWTASHLSLVERPRTRVYGEVVSRKGSLFLRIDREVGNADWVLDAGSTRVQHGDAVVASIADGKVVLLYKVEAGEDRSLERIIARHGLSKDFSPQALEDARLAREVPHAVGSRRDLRDVPTVTVDAPSTRDIDDAISVLPAGPDGALRLLVSIADVGERVKEGTALDAEARERATSVYMAGRVLPMLPEALSSDWLSLVPGQERHCLTVELRIDPQGRVTAADVYESVIRSWARLNYDEVGAFLDRGEVSPPMEPVREVMPWFRLASARLAVARGARGGMEFARDEARFTFDASTGAVSGLVSERPTSAHGMIERFMVAANEAIATWMLARGLPGVFRVHEQPDPERVADLNAFAEHSGFAAGFGRELTPLALSAFDRQIVGAAAEPALRSVLRRALGPSRYTVKPGPHFGLAAPLYLHFTSPIRRYADLAVHRTLKGYLHGRRDYLDEDPTVESLATHINARARSANRAETDRHHVLEARWLAGHVGKEFSARIVRVKPFGLVAQLDGMLAEGMLPAEGLPGGPFRPDARELSLVGKERAFTVGMPVTVKVASTDEQLGRVELALVG
>NZ_CP006003.1|WP_052771406.1|38697_39441_-|hypothetical-protein
MKKSLVPAIALSSFALLHAPLALAGDEPLVKAASIDLDGDGKPEDISLEAKEDAKGFSYVLKVGAATVNTRSDAEVHGFVIVDIDSGDKRKEVAVHTGMTDHDSYDALYAFDGKALKSMGSVHTPIEVKGNGIILSNTWQGFWNRVDKYVVDAKAGKLTHVPQEFYAVGKEAQVRESFPITQTRSDSKPVAQLAKGSTIQVLLAVLLPVKGQRYKDNAYLVKSSTGLVGWVSESVLTSKTEGLPFAG
>NZ_CP006003.1|WP_046710245.1|39560_40058_-|YkgJ-family-cysteine-cluster-protein
MPLSTLCLRCGMCCDGSLFTHVSLQPDEATALQRRGVPLSRREDGTQALAQHCGALEGRTCTVYSDRPASCRRYHCQLFAALAEQEVSLEEALGVVDQAHALRTTLERELPGDVTPDAPRSVMQRARRAAQAHPARPLSQRAQDAYANTEAFLDKHFRGRFGRRG
>NZ_CP006003.1|WP_046710246.1|40642_42682_+|hypothetical-protein
MQADTRDGTRGRESVLGYRVGTELTAVASFGDGDAPGRLVQLSLEHLTLHLDSRSLPSPGQAASVVLGQGERWATSLAAEVTEVRGGKPEVSLRFVSPPLDAGRRIVTVLEALRDNGLLLPPETRPVWKERIDRKERVLRICEALVGRQARGVARTPQGQKVPVTAVHFDLHNGRMGWRFEGPLPQGPFVLEAFGYSSVVHLEIHDAREEAGWVMMSVPTEVVRYRHRWLRRAPPSSPCTLSFDHPLWPQVHVRRPVLDLSYEGLAFMTEPGEDLLYPGLRQPVLEVAMEGMAPVRLRAEVRNISGTAAGRRCGMSVRPLDAEGARAWRGLVEAQMHPSTRVEGDWGDATWKLFQGSGYFGLPGKSPEDFTEERPWFDATQERLEGRTRLGYRVVRPAGESLEATLSVVKPYEGTWMAHQLARQAVPGQRSSAREALRDIYLRGYEPTQVDPDVKWFIAYCEANVRWVRFTKFDFASWYEHTGQASLTPFRLMEAEVERDWDHPEDVDVAVPTEDEQARFFQEIERTRPVAYREALDLVPERFELSRARTKWGEAGLGRERELRVARVDGKAVAFAVMESAQPGLNLFNVLDGVRLVTLTDDALPETQRALLALLAHAAEWYRPRGRRVFVHYVESACVEYVERAALADLGEGKLWIISSALLPEFLEHLCEATTPRVA
>NZ_CP006003.1|WP_046710247.1|46013_47012_-|Maebl
MNGRTNEHRIALFLDFENLVTNTGISASNFDLQPSLDRLLEKGKVVFRRAYCDWSRFSDAKIGLHRFGVELIDVPPSTRAGKNGADMRLVIDALELCYARESIDTFVIASGDSDFCPLAYKLRENGRTVIGLAVKESTSPLFVNACDEFIYLRTRQRPEKNEKGDKGRHGGASEEAGHGKRGRHGRDAGGKGGKAETDKQASSGGKAHAKSDVPQIAREVVQNLLARATGPVNPSLIKETIVRKEPDFDESEYGFATFAKLLAALEQEGVLRRIQQGRQWYVVGADADLGHGDTKEAKEPKESKGKKHGKGRVEEVEEELESYPDPDEDDGL
>NZ_CP006003.1|WP_052770691.1|47312_47741_+|hypothetical-protein
MGALLVPAISAAEIPNHDSREFQQSQIGTDNTTTRASVLPPLNLGGMIGTDVTPTQGQVPIVQGPKVDTLPDPKRTKQISGEVVELGNDVLYIQEDQQGAVIPLDLQALRLTQTPREGQKVVADYQVENETQNLATALQGEK
>NZ_CP006003.1|WP_046710248.1|47812_48907_-|fructose-bisphosphate-aldolase-class-II
MPLIALRPLLDYAAANNFGVAALNVNNMEQIQAIMEAARATQSPAIIQASRGARKYTNDLFLRNLMQAAVELYPEIPVVMHQDHGNSPETCISAIRMGFTSVMMDGSLEDDGKTPSSYEYNVAVTREVVNVAHRFGVSVEGELGVLGSLEHGMGEKEDGHGAEGKLTLDQLLTDPDQAVDFVNRTGIDALAVAMGTSHGAYKFSRKPSGDVLAMSRIEEIHRKIPNCHLVMHGSSSVPKELCDIINANGGRIKETYGVPVEEIQRGIRAGVRKINVDTDNRLAITGAIRKAFTAKPEEFDPRYYLTPARAAMQAVCEERMKQFGQAGHAKKVPHVTLEQMARDYAAGKFGDNARPDTVVGKKSK
>NZ_CP006003.1|WP_046710249.1|49022_49799_-|haloacid-dehalogenase
MKTEHVEETLERIAREVESTPGGLLAFDGDGTLWSGDVGDDLFMSMTGHDAVREDVRPRLTAVATHYGLETEGSPSTLARRVFSAFQAGRIPEKDICEMATWVAAGWTLEELSAFARGVVESHGVAERVHPEIHRVLEWARAHDVPCYVVSASPLAVVEAAARVVGISPEQVVASTPQSRDGVVWTDVVSPIPYGPGKVTCLRARTQRPLYAAFGDNVFDLELLGASRVPVAVRPKPRLMERAGSLPLLVQLHPVASR

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Click the colored protein region to show detailed information

Crispr_ID: NZ_CP006003_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP006003_2

244151-244242

Orphan

Consensus_repeat	Method
GTTGCGTCGTTGTCGAGAGTCGAGGACGTTC	CRISPRCasFinder

1 spacers

csa3

The CRISPR arrays of NZ_CP006003_2

>merge|NZ_CP006003|2|244151-244242|CRISPRCasFinder
GTTGCGTCGTTGTCGAGAGTCGAGGACGTTCAACATCATCGCGCTGGAGCCCTCGACGGGAGTTGCGTCGTCGTCGAGAGTCGAGGACGTTC

>NZ_CP006003|2|2|244151-244242|CRISPRCasFinder
GTTGCGTCGTTGTCGAGAGTCGAGGACGTTC	AACATCATCGCGCTGGAGCCCTCGACGGGA
GTTGCGTCGTCGTCGAGAGTCGAGGACGTTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP006003.1\|WP_046710373.1\|252362_252653_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046710365.1\|241361_243422_+\|K(+)-transporting-ATPase-subunit-B	unknown	unknown	gnl\|CDD\|234905
NZ_CP006003.1\|WP_046710368.1\|245535_247377_+\|two-component-sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|227335
NZ_CP006003.1\|WP_052770707.1\|227730_230337_+\|right-handed-parallel-beta-helix-repeat-containing-protein	unknown	unknown	gnl\|CDD\|379079
NZ_CP006003.1\|WP_052770708.1\|251198_251618_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046710372.1\|250304_250784_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046710370.1\|248228_248693_-\|metal-binding-protein	unknown	unknown	gnl\|CDD\|376622
NZ_CP006003.1\|WP_046710361.1\|237688_238048_-\|transcriptional-regulator	csa3	COG0640_csa3_CAS-I-A	gnl\|CDD\|238042
NZ_CP006003.1\|WP_046710357.1\|225380_226094_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|334588
NZ_CP006003.1\|WP_046710358.1\|226246_227032_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_CP006003.1\|WP_046710364.1\|239639_241358_+\|potassium-transporting-ATPase-subunit-KdpA	unknown	unknown	gnl\|CDD\|377138
NZ_CP006003.1\|WP_046710363.1\|239537_239627_+\|K(+)-transporting-ATPase-subunit-F	unknown	unknown	unknown
NZ_CP006003.1\|WP_046710360.1\|236804_237692_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|176903
NZ_CP006003.1\|WP_082164904.1\|248823_250191_-\|sigma-54-dependent-Fis-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225114
NZ_CP006003.1\|WP_046710362.1\|238247_239375_+\|porin	unknown	unknown	gnl\|CDD\|369446
NZ_CP006003.1\|WP_046710359.1\|227056_227497_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046710367.1\|244372_245539_+\|histidine-kinase	unknown	unknown	gnl\|CDD\|225115
NZ_CP006003.1\|WP_046710374.1\|253454_253952_+\|PTS-system-transporter-subunit-IIa	unknown	unknown	gnl\|CDD\|334031
NZ_CP006003.1\|WP_046717283.1\|252700_253195_+\|PTS-system-transporter-subunit-IIa	unknown	unknown	gnl\|CDD\|334031
NZ_CP006003.1\|WP_046710369.1\|247631_248099_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP006003.1\|WP_046710365.1\|241361_243422_+\|K(+)-transporting-ATPase-subunit-B	gnl\|CDD\|234905	PRK01122, PRK01122, potassium-transporting ATPase subunit KdpB.	0
NZ_CP006003.1\|WP_046710361.1\|237688_238048_-\|transcriptional-regulator	gnl\|CDD\|238042	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to dissociate from DNA in the presence of metal ions.	1.39775e-14
NZ_CP006003.1\|WP_052770707.1\|227730_230337_+\|right-handed-parallel-beta-helix-repeat-containing-protein	gnl\|CDD\|379079	pfam13229, Beta_helix, Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.	7.53223e-06
NZ_CP006003.1\|WP_046710358.1\|226246_227032_+\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	7.63019e-32
NZ_CP006003.1\|WP_046710368.1\|245535_247377_+\|two-component-sensor-histidine-kinase	gnl\|CDD\|227335	COG5002, VicK, Signal transduction histidine kinase [Signal transduction mechanisms].	1.73801e-59
NZ_CP006003.1\|WP_082164904.1\|248823_250191_-\|sigma-54-dependent-Fis-family-transcriptional-regulator	gnl\|CDD\|225114	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms].	7.66597e-158
NZ_CP006003.1\|WP_046710370.1\|248228_248693_-\|metal-binding-protein	gnl\|CDD\|376622	pfam01814, Hemerythrin, Hemerythrin HHE cation binding domain. Iteration of the HHE family found it to be related to Hemerythrin. It also demonstrated that what has been described as a single domain in fact consists of two cation binding domains. Members of this family occur all across nature and are involved in a variety of processes. For instance, in Nereis diversicolor hemerythrin binds Cadmium so as to protect the organism from toxicity. However Hemerythrin is classically described as Oxygen-binding through two attached Fe2+ ions. And the bacterial NorA is a regulator of response to NO, which suggests yet another set-up for its metal ligands. In Staphylococcus aureus the iron-sulfur cluster repair protein ScdA has been noted to be important when the organism switches to living in environments with low oxygen concentrations; perhaps this protein acts as an oxygen store or scavenger.	3.02261e-08
NZ_CP006003.1\|WP_046710364.1\|239639_241358_+\|potassium-transporting-ATPase-subunit-KdpA	gnl\|CDD\|377138	pfam03814, KdpA, Potassium-transporting ATPase A subunit.	0
NZ_CP006003.1\|WP_046710360.1\|236804_237692_-\|hypothetical-protein	gnl\|CDD\|176903	cd08894, SRPBCC_CalC_Aha1-like_1, Putative hydrophobic ligand-binding SRPBCC domain of an uncharacterized subgroup of CalC- and Aha1-like proteins. SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain of a functionally uncharacterized subgroup of CalC- and Aha1-like proteins. This group shows similarity to the SRPBCC domains of Micromonospora echinospora CalC (a protein which confers resistance to enediynes) and human Aha1 (one of several co-chaperones which regulate the dimeric chaperone Hsp90), and belongs to the SRPBCC domain superfamily of proteins that bind hydrophobic ligands. SRPBCC domains have a deep hydrophobic ligand-binding pocket and they bind diverse ligands.	1.05832e-60
NZ_CP006003.1\|WP_046710362.1\|238247_239375_+\|porin	gnl\|CDD\|369446	pfam07642, BBP2, Putative beta-barrel porin-2, OmpL-like. bbp2. BBP2 is a family of putative porin proteins that are likely to be outer membrane beta barrel proteins porins.	1.30561e-83
NZ_CP006003.1\|WP_046710357.1\|225380_226094_-\|hypothetical-protein	gnl\|CDD\|334588	pfam01555, N6_N4_Mtase, DNA methylase. Members of this family are DNA methylases. The family contains both N-4 cytosine-specific DNA methylases and N-6 Adenine-specific DNA methylases.	7.13901e-07
NZ_CP006003.1\|WP_046710367.1\|244372_245539_+\|histidine-kinase	gnl\|CDD\|225115	COG2205, KdpD, Osmosensitive K+ channel histidine kinase [Signal transduction mechanisms].	2.50277e-144
NZ_CP006003.1\|WP_046710374.1\|253454_253952_+\|PTS-system-transporter-subunit-IIa	gnl\|CDD\|334031	pfam00359, PTS_EIIA_2, Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2.	6.73964e-26
NZ_CP006003.1\|WP_046717283.1\|252700_253195_+\|PTS-system-transporter-subunit-IIa	gnl\|CDD\|334031	pfam00359, PTS_EIIA_2, Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2.	4.862e-20

>NZ_CP006003.1|WP_046710365.1|241361_243422_+|K(+)-transporting-ATPase-subunit-B
MSSSSSKPASLFDASLLKPALLDSLKKLHPRDVARNPVMFVVWAGSLLTTVLVVKDLVSPRTDGAPLWFTVSVALWLWFTVLFANFAEAVAEGRGKAQAGALRKMRKDTTARRLVEGREERVPAPDLRKGDLVVCEAGDLIPGDGEVVEGIASVDESAITGESAPVIRESGGDRSAVTGGTKVLSDRIVVRIAVNPGESFLDRMIGLVEGAARQKTPNEVALHILLVGLTVVFLLACVSLVPLALYSGVPLSGTAVVALLVCLIPTTIGGLLSAIGIAGMDRLLRKNVLAMSGRAVEAAGDVDTLLLDKTGTITLGNRMATELLPMPGVRMEELAEAAQLASLADETPEGRSIVTLVKDSYKLRPRELLAHHATFVPFTAQTRMSGCDLVEPHARSIRKGAVDAIVKHVQGQGGSVPSELALAAGRIGDAGGTPLAVAEGSRLLGIIHLKDVVKGGIRERFDRFRAMGIRTVMITGDNPRTAAAIAREAGVDDFLAEATPEAKLALIRTEQAKGKLVAMTGDGTNDAPALAQADVGVAMNTGTQAAKEAGNMVDLDSNPTKLLEVVEVGKQLLMTRGTLTTFSIANDVAKYFAILPALFMGVFPQIAPLNVMGLTSPFSAILAAVIFNALIIIALIPLALRGVRYRPLGAAALLRRSLLIYGLGGVIVPFVGIKALDVLLTAVGLA
>NZ_CP006003.1|WP_046710364.1|239639_241358_+|potassium-transporting-ATPase-subunit-KdpA
MTLIGWLQVLLFFALLLALTKPLGVYLFRVFESEAQPLPRVLGPVERGLLRLSGASERREQTWVEYCGALLAFSLVSLLILYALQRAQHLLPFNPQNLGAVGPELAFNTAASFVANTNWQSYAGESTMSYLTQMVGLAWQNFVSAAAGLGVALALARGFTRRPGPEGSKTLGNFWVDLVRGTLYVLLPLCFVVALFFVSQGMMQNLSPYHELTTLEGGRQTLAMGPVASQEVIKMLGTNGGGFFNANSAHPFENPTPLTNLVQMLLIFAIPSALTYTYGKMTGDTKQGWALFAAMSFLFFVGVLAAYSAEAQPNAAVSASQVVQVGNMEGKETRFGTAASTLFAVVTTDASCGAVNAMHDSFNPLGGLVPLVNMQLGEVIFGGVGAGLYGILIMVVLAVFIAGLMVGRTPEYLGKKIEAREMKLAMLYVLIFPLFILGLSAVAAVIPQGVSSLNNAGPHGLSEILYAFTSGTANNGSAFAGLNANTPFWNISLGLAMLGGRFLMIVPALAIAGSMVGKKVVPAGPGTFPTNGVLFTGLLVSIVVIVGALTFFPALSLGPIVEHFLAGAGKVY
>NZ_CP006003.1|WP_046710363.1|239537_239627_+|K(+)-transporting-ATPase-subunit-F
MTFEYAAGAVLAVLLTVYLVYALLRPERF
>NZ_CP006003.1|WP_046710362.1|238247_239375_+|porin
MLSIDSTQLLLSLLLQQADASLPAPDATANDSAATRFLSRVQPEGGVDVYFAHNFNRPANKASFLPGTGTSAKRHGEVSINLASLGLSAEPAPVGFKVLLGFGTGAEVVHSAEPEGVALGPAVWRYVQQASVSFATGPLTLEAGLYPSHIGLESLQSQLNWTYTRSWMGEYSPYYQTGLKGTWAFAPAWSAQLQVLNGWQTLGDNNRGLAVGTQVAYAGERLSAALNTFIGEEGTTGDEGLRLFADAVATFRVLPSLWLAATADVGTQRLSSRDRANWYAAGLNARVLLAEPVALAARVEAYRDADGLMTGVAQTLSSGTVTLEVKPAEQLTLKLEARHDRSTEAVFAGRDTSDDGSPVPKDTETLVVLGATAFF
>NZ_CP006003.1|WP_046710361.1|237688_238048_-|transcriptional-regulator
MLNHGAVDRVFQALGDSTRRAIVERLSQGSMSVSDLAKPLDMTLAAVVQHLQVLEESGLVRTEKVGRVRSCHIQPQGLRVAEDWISARRSLWERRFDRLGELLDGPESPTPSPRKKGSS
>NZ_CP006003.1|WP_046710360.1|236804_237692_-|hypothetical-protein
MKALPVVHGSFTLERTYKASPARVFAAWSDVETKAQWFIGPPERWRLVKRELDFRVGGTELLHGQFEGRHASVFTARYHSIIPNERLVYVYDMHVGDKHLSVSLATVELHATKTGGTRMVFTEQATFLDGADGTRSREGGTAEHFDRLGRVLEESRDIVSSRLFDTSRDRLYRAFSNPEQLSRWWGPKGSTNTFEVFDLRPGGQWRFVMQGPDGARYAMHKEFTQVIPLERVVFRHLQESHHFEMRLDFADEGPKTRLTWRMRFESKEELEKVRGFIEEANEQNFDRLAELLATP
>NZ_CP006003.1|WP_052770707.1|227730_230337_+|right-handed-parallel-beta-helix-repeat-containing-protein
MNRANSMRLALLAGALVLAVGCHLEEPLGVSQEATGSLRVVTVLPRSLPLDQVVKVEVTVTPVQGEPVSTVLEGAGDSWGGLMRNLPPGRMGAVRARVLDAADGVVGEVSVADVELEKHRPALLVLVPHRVNPSLGSTAPIIDAVVGSRAAVSPGESIRFRVVARGAEASETLTYAWEAVEGQFTDKGGSDAEWTAPLRRGPDSLTLKVMGAQGAVSTLRFSVDVALGGGWGNAHEASLERDPVVTELGARPGSQVRVGTPVELEVTAVDDDGDLLSYAWTSTCEGEFEDATSPTTRFTPMEAPQVACDNCQLSVRISDNATRASQVRSLNLCVTNPQPPTLTEVTQSSEDAFAGQRVRLSASATDPQGEPLTFAWTANTGLLGNMVRGAGTGSADWVMLSCAPRDVTPTITLTVTNASGLSVTRVLVVEWEDLWCDEHAPCPAVLGASTVTLTADCTTAQTVWIPDGYTLDGDGHVLTAVDPRDGRFRGAVLSSLGTTAHVRDVTVAARGLSELACDAGSARLRGILFDGASGSILDSVVRDVNQKEGEGGCQEGVAIEVRNARDAESVAHVEVLRNHVVGYQKAGIVGTGKVELNLEDNRVEGGGPVSFIARNGIQFSDGATGRATGNHVTGHAYTGDSAVASGILVAGGAYYDFALCEDIVLFENTVEDNDVGINLSQGEVGGGPLAVSTRLQVSRNTVTHRGPVTNGYPYQAGISDLGGANAISQNKVSGPGYDRGTRPGATFDVDVVAGAASRLFFMTPAREAAAGRCSEGLVVQSQDSRGNLSALAAPSLTLEGTGPAATGVALFSDATCTTPLATSGTGWSLLLERTQQEATFYFQATQLGELTLTVSGEGVTGTQLQRVR
>NZ_CP006003.1|WP_046710359.1|227056_227497_+|hypothetical-protein
MAWSMSFDYDAPNDVVTANFTDCVLVNDEDVLRWRREVEVHLARYAGSGKVDLLINLDGLVVKFTAGRVFGKERREVLERFTHRSYRFGGDEMTRMFVLTSGAINGAAVNHYLTRDEALAALKAEREALRQRGPSPFGGGFIGGKV
>NZ_CP006003.1|WP_046710358.1|226246_227032_+|alpha/beta-hydrolase
MPTISSTDGTSLHYRVIGDGPRTVVLVHGWMVSGAVWDGLVERLDLTGLRLVIPDARGTGQSGKAAGGYTLEGLARDVLTVVDAVGAERFTVVGHSMGGQLAQWVASEVPARVDALLLLNTVPASGLPLPPEAAGLFRTSAGDREKQKTILGLACKTLTPEQLEALLKDAGAVSAASIEGAFDAWTTGGIQERLARITAPTLVVSTDDAFLPPAFLRQAVVAPIRRARMAHIPGPGHYPHVEHPQETAAVLSAFLAGSAPA
>NZ_CP006003.1|WP_046710357.1|225380_226094_-|hypothetical-protein
MLHTTAGRTVHCEDALTWLAAQPILTGCSAVASLPDASEFPTLSLAEWKAWFIRAAALVMSRVPDDGVAIFYQTDVKDEGLWVDKGYLVSRAAEDSGMGLLWHKVVCRRAPGTVTFGRPAYSHMLCFSRGIRVDLGKSTADVLPDAGEVTWTRGMGVEACQLACRFILEHTPTRTVVDPFCGHGTALAVANAMGLEAIGVELSRKRARKARNLRARWHEQKLVLTQDDAAAQASDSE
>NZ_CP006003.1|WP_046710367.1|244372_245539_+|histidine-kinase
MTPRRSRAEDFLELVERGRRGRLKLYIGFAAGVGKTYRMLEEAHALKRRGVDVVLGFVETHGRKETEALVSGLEVVPRKTYSYREVLVEEMDLEAVLARKPQVAVVDELAHTNLPLCRHRKRYQDVQALLDAGINVIGAFNVQHLESLNDLVERTTGVVVRETLPDSFLKGADQVVNLDLAVEDLHERLKAGKIYAEDKVPHALERFFTGENLSTLRELALREVAESLDRATSGLSSRSGEDEPRKGAAWGRVLVAMSSHPPRAATLLRRGSRMAGRLNTDWFVVYVETPREAPHLIDAEAQRHLLANIEKARELGAEVVRLRSKDPVEAILDFARSHGVGHIMVGRSHQPWWKRALGRAADVRLLREGEGFDIHVVAFEPSSEEKRP
>NZ_CP006003.1|WP_046710368.1|245535_247377_+|two-component-sensor-histidine-kinase
MTLRMRLLLAQAPLALALALVGLVAVITLARLGRSGQRILQDNYRSVLATQRMTEQLERMDSAALFIVAGERERGQSQQASQRQVLEAELRLQEGNVTEPGEAEATRRLRAGWERYVAAYDGFLALASPEEQKAAYFRNIEPAFREVKDAASAVLALNQDAMVHKSEQLRRQSDRVNTLMVLAVLVAFALGLFASTSLTHRALRPVSVLSQAVQRLGRGDYAVRATVEGSDEIARLGEDFNSMAEALQQYRQSSLGELLQAQAASQAAIDSLPDPVVVFGADGGLLNVNRSAEDVLKLGLEGGGDVLGRVVPEARDVLERVRGHVLGGKGAYQPRGYEEAVRVPLTEGDRWLLPRASPVYGETGEVVGATVILQDVTRLRRFDELKNDLVATVAHEFRTPLTSLRMAVHLVAEGMVGPVTEKQADLLFAAREDCERLQGIVDDLLDLSRIQAGQLRLEVRRVSTEELVQAALDSQRSAAEERGVRLSQLVGLEVEAVDVDPERMGLVLGNLVGNGVKHTPSGGDVEVRVARDGTQVRFEVRDTGEGIALEQQARIFEKFYRAPGAPAGGAGLGLSIVKEIVQAHRGEVGVVSAPGRGSTFWFTLPGQRVVEPS
>NZ_CP006003.1|WP_046710369.1|247631_248099_+|hypothetical-protein
MNLVLVNCPLGAVVANYDPPLTQTPRATTIDVNTTFPACVTLPGSAVTSASIVVPPFVEQGKSCSDLTDIGTVAMPMVLWNTGETSSLKTTQVRVATQGTLTVVTGVGTVVAGKFQGAIANRTLTFLTADLTEGCLAGEGLSSINGQDTLTLTRL
>NZ_CP006003.1|WP_046710370.1|248228_248693_-|metal-binding-protein
MDVIDLLIQQHREVDALFLAFRNASDDTSRKELCIQLAEALMLHSTIEERWVYPKATRVVGDEKIQHAEEEHQEMTQLLGDIVRMRDDMNAVKMKVDALEKVVKRHVADEEKNILPQVAKNVTEQELGMSCKDLVREASRIRREEMKDWGGATV
>NZ_CP006003.1|WP_082164904.1|248823_250191_-|sigma-54-dependent-Fis-family-transcriptional-regulator
MEPAPVSGERPMRVLVVDDERNIRHTLRVCLEGFGCEVREAATPEAALAALAQGPADLAFVDLKLGTASGLDLLPRLLAESPNLDVVLITAYATFDTAVEAVRRGARDYLPKPFTPAQIRHVLDRSREHRALSSQLESLEGQLAQAVPEATLDTASPVMHAAIGLVSRAATADAAVLLRGESGTGKGVLARALHSMSVRRRRPFVTVNCPTLSEQLLASELFGHVRGAFTGAVKDQPGRVEQAEGGTLFLDEIAEMSPSLQAQLLRFLQEKQFERLGEGRTRKADVRVVAATNRDLEKDVAEGRFREDLFYRLNVIEVKLPSLRERPEDLLALARRFVAFFAKTGQRPVTPELSPATEKMLLAYPWPGNVRELRNAIERALIVWPAGVLEPQAFPDRIAAAAGTVVALGGPHTLEEVEREHTLRVMASAPTLDEAAKVLGIDASTLWRKRKKYES
>NZ_CP006003.1|WP_046710372.1|250304_250784_+|hypothetical-protein
MRNPRAAPVVQAATRAATSSHPRQRILALPASFRWNMRAMGSNGNEGEEENIFTRDRAPTRSQKRVRQAVTLGIVVLVLAGVWAYLQGGENRALNALSPAQREALFQETRDDIRLLCMGDAGPKLLKRCQKQAEFLTRFSECDEACRQELAPFLRQAVR
>NZ_CP006003.1|WP_052770708.1|251198_251618_+|hypothetical-protein
MWACSEVASCAGGTGIAPMRVMRPELRLVHDSAPQAPEAPPSLASPWWKDLLSILALGASLALVVGWLGSERRAVLSLEPDERALVFRESWDGFQRLCSAPSQSGLIPRCREQARFLLLFPECQGACQEQARLHGRALR
>NZ_CP006003.1|WP_046710373.1|252362_252653_+|hypothetical-protein
MLGEAPLKAVRLLGAKRLAEARVRAEHALKGARRCSCCRGLLEHLHDRIGSTLFLDDDPEQLARAFDAEERDGFTARVLAACIVLSGRERVVAPAL
>NZ_CP006003.1|WP_046717283.1|252700_253195_+|PTS-system-transporter-subunit-IIa
MLRWTEFLEVEAICPSLRARERVGVLHELAGMMADEAGVPARELAVHLLAREQLGSTAMEGGVAVPHCRHARAGRIVTCLGIHRGGLAFGEPEDGLVRIYVGLVSPPDTGGLHLNVLSRIATLLHDVRVRDALMAAASPAVIRALLVRAEEEVLPLRGEVAVAR
>NZ_CP006003.1|WP_046710374.1|253454_253952_+|PTS-system-transporter-subunit-IIa
MLRWTDFLEVDAVRLSLEARERVGVVHELAGLMAARARVPAKELTEHLLARERLGSTAMAGGVAVPHCRLVGVPRIVTCVGLHPEGLDFGEANGGRVRVFVGMVSPPDPAGLHLNVLARIGALLRNARLREALLTAPSPAALRALLVCVEDAHVSQRSEAAVARW

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP006003_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP006003_3

544083-544227

Orphan

Consensus_repeat	Method
GCCACTCAGGACCACGCGGGTTCGACTCCCGCAGGCTGCTTCACGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP006003_3

>merge|NZ_CP006003|3|544083-544227|CRISPRCasFinder
GCCACTCAGGACCACGCGGGTTCGACTCCCGCAGGCTGCTTCACGAACAACACAGCAGGGACGCATCGCAGCCTTGGCCGAGGGGAAAGGCACCTGAGAGCCACTCAGGACCGCGCGGGTTCGACTCCCGCAGGCTGCTTCACGA

>NZ_CP006003|3|3|544083-544227|CRISPRCasFinder
GCCACTCAGGACCACGCGGGTTCGACTCCCGCAGGCTGCTTCACGA	ACAACACAGCAGGGACGCATCGCAGCCTTGGCCGAGGGGAAAGGCACCTGAGA
GCCACTCAGGACCGCGCGGGTTCGACTCCCGCAGGCTGCTTCACGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP006003.1\|WP_046710583.1\|547685_548843_-\|acyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|173847
NZ_CP006003.1\|WP_046710585.1\|549812_550583_+\|enoyl-CoA-hydratase	unknown	unknown	gnl\|CDD\|236162
NZ_CP006003.1\|WP_046710580.1\|542194_543562_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|214720
NZ_CP006003.1\|WP_046710588.1\|553342_554761_+\|aldehyde-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|143456
NZ_CP006003.1\|WP_046710581.1\|544773_545163_-\|VOC-family-protein	unknown	unknown	gnl\|CDD\|319925
NZ_CP006003.1\|WP_046710574.1\|537268_537712_-\|DUF1768-domain-containing-protein	unknown	unknown	gnl\|CDD\|271319
NZ_CP006003.1\|WP_052770731.1\|545250_546018_-\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
NZ_CP006003.1\|WP_046710589.1\|554793_555888_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|176240
NZ_CP006003.1\|WP_046710576.1\|538561_538813_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046710578.1\|539727_540651_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046710586.1\|550584_552108_+\|3-hydroxyacyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|236211
NZ_CP006003.1\|WP_046710575.1\|537736_538381_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379325
NZ_CP006003.1\|WP_046710577.1\|538812_539718_+\|tetratricopeptide-repeat-domain-protein	unknown	unknown	gnl\|CDD\|188247
NZ_CP006003.1\|WP_046710573.1\|536215_537130_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_CP006003.1\|WP_046710571.1\|534361_535084_-\|DNA-binding-response-regulator	unknown	unknown	gnl\|CDD\|236956
NZ_CP006003.1\|WP_046710582.1\|546689_547649_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_CP006003.1\|WP_082164923.1\|548854_549706_-\|IclR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224332
NZ_CP006003.1\|WP_046710579.1\|540679_542011_-\|magnesium-transporter	unknown	unknown	gnl\|CDD\|225148
NZ_CP006003.1\|WP_046710587.1\|552113_553310_+\|beta-ketoadipyl-CoA-thiolase	unknown	unknown	gnl\|CDD\|181242
NZ_CP006003.1\|WP_046710572.1\|535080_536151_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225814

Protein	Function_ID	Function_description	E-value
NZ_CP006003.1\|WP_046710585.1\|549812_550583_+\|enoyl-CoA-hydratase	gnl\|CDD\|236162	PRK08138, PRK08138, enoyl-CoA hydratase; Provisional.	5.97511e-147
NZ_CP006003.1\|WP_046710580.1\|542194_543562_-\|hypothetical-protein	gnl\|CDD\|214720	smart00557, IG_FLMN, Filamin-type immunoglobulin domains. These form a rod-like structure in the actin-binding cytoskeleton protein, filamin. The C-terminal repeats of filamin bind beta1-integrin (CD29).	0.000356068
NZ_CP006003.1\|WP_046710588.1\|553342_554761_+\|aldehyde-dehydrogenase-family-protein	gnl\|CDD\|143456	cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like. The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD.	0
NZ_CP006003.1\|WP_046710581.1\|544773_545163_-\|VOC-family-protein	gnl\|CDD\|319925	cd07264, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	2.61299e-35
NZ_CP006003.1\|WP_046710574.1\|537268_537712_-\|DUF1768-domain-containing-protein	gnl\|CDD\|271319	cd15457, NADAR, Escherichia coli swarming motility protein YbiA and related proteins. This family of uncharacterized domains was initially classified as Domain of Unknown Function (DUF1768). It contains members such as the E. coli swarming motility protein YbiA. Mutations in YbiA cause defects in Escherichia coli swarming, but not necessarily in motility. More recently, this family has been predicted to be involved in NAD-utilizing pathways, likely to act on ADP-ribose derivatives, and has been named the NADAR (NAD and ADP-ribose) superfamily.	6.65056e-66
NZ_CP006003.1\|WP_052770731.1\|545250_546018_-\|AraC-family-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	1.74846e-17
NZ_CP006003.1\|WP_046710589.1\|554793_555888_+\|hypothetical-protein	gnl\|CDD\|176240	cd08279, Zn_ADH_class_III, Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding.	2.63742e-178
NZ_CP006003.1\|WP_046710583.1\|547685_548843_-\|acyl-CoA-dehydrogenase	gnl\|CDD\|173847	cd01158, SCAD_SBCAD, Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases. Short chain acyl-CoA dehydrogenase (SCAD). SCAD is a mitochondrial beta-oxidation enzyme. It catalyzes the alpha,beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of SCAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. This subgroup also contains the eukaryotic short/branched chain acyl-CoA dehydrogenase(SBCAD), the bacterial butyryl-CoA dehydorgenase(BCAD) and 2-methylbutyryl-CoA dehydrogenase, which is involved in isoleucine catabolism. These enzymes are homotetramers.	8.37672e-143
NZ_CP006003.1\|WP_046710586.1\|550584_552108_+\|3-hydroxyacyl-CoA-dehydrogenase	gnl\|CDD\|236211	PRK08268, PRK08268, 3-hydroxy-acyl-CoA dehydrogenase; Validated.	0
NZ_CP006003.1\|WP_046710575.1\|537736_538381_-\|hypothetical-protein	gnl\|CDD\|379325	pfam13672, PP2C_2, Protein phosphatase 2C. Protein phosphatase 2C is a Mn++ or Mg++ dependent protein serine/threonine phosphatase.	7.67e-07
NZ_CP006003.1\|WP_046710577.1\|538812_539718_+\|tetratricopeptide-repeat-domain-protein	gnl\|CDD\|188247	TIGR02795, Uncharacterized_protein_in_oprL_3'region, tol-pal system protein YbgF. Members of this protein family are the product of one of seven genes regularly clustered in operons to encode the proteins of the tol-pal system, which is critical for maintaining the integrity of the bacterial outer membrane. The gene for this periplasmic protein has been designated orf2 and ybgF. All members of the seed alignment were from unique tol-pal gene regions from completed bacterial genomes. The architecture of this protein is a signal sequence, a low-complexity region usually rich in Asn and Gln, a well-conserved region with tandem repeats that resemble the tetratricopeptide (TPR) repeat, involved in protein-protein interaction.	6.13744e-08
NZ_CP006003.1\|WP_046710573.1\|536215_537130_-\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	4.16484e-19
NZ_CP006003.1\|WP_046710571.1\|534361_535084_-\|DNA-binding-response-regulator	gnl\|CDD\|236956	PRK11697, PRK11697, two-component system response regulator BtsR.	1.14429e-58
NZ_CP006003.1\|WP_046710582.1\|546689_547649_-\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	2.0556e-08
NZ_CP006003.1\|WP_082164923.1\|548854_549706_-\|IclR-family-transcriptional-regulator	gnl\|CDD\|224332	COG1414, IclR, Transcriptional regulator [Transcription].	1.23494e-61
NZ_CP006003.1\|WP_046710579.1\|540679_542011_-\|magnesium-transporter	gnl\|CDD\|225148	COG2239, MgtE, Mg/Co/Ni transporter MgtE (contains CBS domain) [Inorganic ion transport and metabolism].	2.58526e-126
NZ_CP006003.1\|WP_046710587.1\|552113_553310_+\|beta-ketoadipyl-CoA-thiolase	gnl\|CDD\|181242	PRK08131, PRK08131, 3-oxoadipyl-CoA thiolase.	0
NZ_CP006003.1\|WP_046710572.1\|535080_536151_-\|sensor-histidine-kinase	gnl\|CDD\|225814	COG3275, LytS, Putative regulator of cell autolysis [Signal transduction mechanisms].	9.5737e-43

>NZ_CP006003.1|WP_046710580.1|542194_543562_-|hypothetical-protein
MKTSLPLTLAAVLASVGCSADDQAPLCTVSPATGLFTRDPVVVPLGTAASLRMDVATLMLACDNGSPAQAPDAATAEVLDPENHRVPAEVSLSDMGGEATVSFTPTTVGRHHVLLSFAPVGGVRQLGVHVAGAWRGSPTPVTLPLPRCGQLDRTARGLWLCDGVAVRDAEDRPLRLGTATTPADVAVSGNVVWVVGDGRVRRYVDTGTELELTDSLLTDALGTRPLQARLASENELVVLDGERLHRFVLTDAGVLTAPPSTPWWGTGTQGRFGRDQSTGLLVRASEQRVLIVSMFRGAQDSQACPFEPSAEGSLLPVTGEPCAPLRGRPVGLEDGTLWTLLGSAQPLFPERTLYRWTLEAGRLEQDGALGLELSLGVAEAFLHLGPTVPILYSTTGEPRPSQPRRLSGQPVLGLELLPTHFPLAEGSRDTSSRFHWGGDSRPLGGFTTVYEQARP
>NZ_CP006003.1|WP_046710579.1|540679_542011_-|magnesium-transporter
MMDSPQSASLSVEELHEVWPVLSIDERLEGFRLLPTSVADDFFLDLSAREQAELITHLPASERRTWVRLLPPDDLADLVQAVAVEPGQAEAILAQLDDASRREVNVLLAYAEDDAGGLMNPRFARVRPEMTIDEAIGYLRKQAREKVETVYYAYALDAEQRLQGVLSLRQLFQAASDKKVADVMQHDVVTVSENTDQEVVSQLFTEHGFMALPVLDEQNRMKGIVTVDDIVDVVQEEATEDIQKVGGMEALEAPYFEVGFFGMLKKRIGWLLVLFLGQMLTATAMSSFEGAIERAVVLSLFVPLIISSGGNSGSQASTLIIRALALGEMRLKDWWRVARREVLSGLVLGFVLGAVGLARIVVWQEVAGAYGEHAFLLGCAVALSVLGVVTFGTLAGSMLPLVLRRFGFDPASASAPFVATLVDVSGVVIYFTVASLLLRGTLL
>NZ_CP006003.1|WP_046710578.1|539727_540651_-|hypothetical-protein
MIRTTPRRTLTLEAPESPGLPAHVSAASGLVRVGDWLHVIADDSLHLATFPARGDAPGRLSRLFEGELPKEPAARKAAKPDLEALCLLGPLAGAPHGALLALPSGSTSARMRGALVTLGADGALTGEVRTVDCATMYQQLSRELGSLNIEGAAVVGGRLRLLQRGNGDAGVDALVDLDRERAMRAIEVGALGPEVVRTTLRWELGRTGGVRLSFTDASPLPDGRMIFTATAEASPDTYSDGAVAGSAVGLLAPDGTPLFLDVVDAKVKLEGVDAREEGGRVHLLLVADADDPSVAAPLLEAVLDVPA
>NZ_CP006003.1|WP_046710577.1|538812_539718_+|tetratricopeptide-repeat-domain-protein
MRTLRLSLVVLALAGAGCRDKPVDHLQRARDATFEKRPDEALVEYRKAFDMLRHDSTPEALVLRARSLKGAADVYWLEQRKVKEAVGVYRELIQQCPESPEALESRIILAELLRVHYRDLRGAIDQLTAALQRNPPQGAELHYQVAKLYFELGDYQQCELETRRLVERFATSVFVDDTLFLQAQAIAMMEGRRQEASRAFADLRTRFPDSELSPHALFEMGKLRSDAGEHEKAIETWVETLKTHPDPTLVQDYIARARKRIANTTAEGVGQREVAFDRARPARSSLEAVGGRPEEAAHEHD
>NZ_CP006003.1|WP_046710576.1|538561_538813_+|hypothetical-protein
MTRTAHTVLAALGAGLLGCNDLEVCGSTSQDVTRDDGSVYRCVTSEDCPRTSRVDVCVTDVSPIAECVSCEESRCVTIIPEKC
>NZ_CP006003.1|WP_046710575.1|537736_538381_-|hypothetical-protein
MGEFETALHVEPASNGKPGADRVLALTHGDATVLVVADGAGNSRRGAEAAEAVLREVQDAVASGAGLERAETWRAVLERCDAELVSSGQGGETTAVVACVTPRRVVGASVGDSELWWFQGEGCHALTEHQHRKPLLGSGGARPVTFDHAWRGGTLLGASDGLFKYVDLRRIQEQVGLADMQAAALALAALPRLVSGALPDDVGLVLCRPSVSRS
>NZ_CP006003.1|WP_046710574.1|537268_537712_-|DUF1768-domain-containing-protein
MSEVIRFYSVTDAHGWCSNFAPYPIKLGGRTWPTSEHYFQALKFAAPEDQEAIRQARTPMLAARMGRDRKRKLRRDWESTKVSVMREAVRAKFTQHEDLTRLLLDTGDARLVEHTDQDDYWGDGGDGSGKNMLGRILMEIREELRAR
>NZ_CP006003.1|WP_046710573.1|536215_537130_-|alpha/beta-hydrolase
MRPTPLLTALCTLCLLVGCATTSSPTTTAAATSAPAAPAAFQVKRSGKGRPVLFIPGLASSGAVWDETVAHLKGGYDSHVFTLAGFAGQPAVPAPFFPTMRTALIEYIREHKLEKPIIVGHSLGGVLALSLALEAPDLVGGLFIVDSVPFLPALMYPGATVETARPFAEQGRAHVRQQTLEQRTQASRQAMRIYATDEARQEVGVRWGVDSDADTIAQAMYEMSTTDLRPELPRITAPTFVFGSWAALKDRVPRENIEALYRGQYQGLSTARVVMHDTARHFIMWDDPEGFFTTLDGFLNEHAR
>NZ_CP006003.1|WP_046710572.1|535080_536151_-|sensor-histidine-kinase
MSSRRARVYAACQAGGWGLYALINGLLSVLSLVMMQRPDEQFARRMLWLVAMSLSGVLITHVARVRLGFREWARLSLSRLAPRVLLVCLAMGTTQSAVAHVLSRFVFRIQGFEDFSLTHIIYGGAFWSVVMMMWLLTYFAVHFVERARTAEHERLQQQIASQTSELRFLKAQLQPHFLFNCLNSVRALIVEDPARAQQAVTHLSSLLRYALASKDAETVPLGRELQVVRDYLSLEAIRLEERLHVREDVSPEALAVPVPAMLVQTLVENAIKHGIAPSPQGGAVTVQAHVSEGALLLEVANTPAPVGTPPAPHSGGVGLHNASERLRLLCGTTASLQLDQTGTALTTARVRIPLPS
>NZ_CP006003.1|WP_046710571.1|534361_535084_-|DNA-binding-response-regulator
MRVLIVDDERLARAELRRLLAAIPDVEVVGEATHVDDACRQVEALEPDLLLLDIQMPGGSGFDVLERLDEPPDVIFTTAFDAHAVRAFSVNALDYLLKPIEAERLAEALERVRQRSGPARRASESTQASGAPLERVFVKEGERCWLVQLAQVPLITSEGNYSRLHLAGHQPLLLRSLSYLEEKLDPSRFFRASRQHLINLDFVDTLEPGPGGTLVARLRGGPEVEMSRRQSQRFRERMSL
>NZ_CP006003.1|WP_046710581.1|544773_545163_-|VOC-family-protein
MKLGYVILYVPDVPATLAFYEKAFGLKRRFLHESNTYGELDTGTTALAFASEEMAGQNGLTVRFHRPKETPAAVEVALVTPDVAGAYEHSVKAGASPVQPPKQKPWGQSVAYVLDLNGVLVELCSPISA
>NZ_CP006003.1|WP_052770731.1|545250_546018_-|AraC-family-transcriptional-regulator
MLEGGYTELAPPAFMADRVDALWRYVTPSTATPGHHRILPDGCTDLIVRFPDVRTLGRGDEPRVTVVGPMESFALVKETPGSVSLGIRLKPGWALALLGVSPRELCNLNVSVKDCAPALVALQQRLSACRSLEHAQALLQQELLRRNASPRHLPKARTAHALQCLQASSGQVRMSTLARELGISERTLHRDILEEAGTAPKLLARVLRFQRALGQLRAGKSALSTVALDCGYADQAHFTREVRELAGVSPTGLLE
>NZ_CP006003.1|WP_046710582.1|546689_547649_-|alpha/beta-hydrolase
MSVAIAVLVGIVVLALALRQWLLVRECTPCPSEAFDGHIHRVGKAVVAERRCENPRATVLCMHGFVADMRYFTRHYEDPGLQLILVTSCDYHVPITGPREVPAPWAKVPSAPEGTIAHDAAVLVQALEHLPRTDHVRVHGHSRGGAVVLEAAKLRPDLFEKVEVVLEAPVLPRARAYTSLTRAQLWLLPFFIPLWRLAPISRHNRGAWGPLEDARKRELIMAFPFNPKRVSTMLTNLVDLARWFDERDESLFRNVRRGTVLVPGKDRVLESKSMLESAQKGRPELEVVTLDGCSHFVLWDRPDALPALERLPERPSATA
>NZ_CP006003.1|WP_046710583.1|547685_548843_-|acyl-CoA-dehydrogenase
MLTAREDETLEQLLSMLERFVKERLIPNEHRVADEDAIPRDIIEEMRALGLFGLSTPVEFGGVGLNMSQEVQVAFVLGQTSPAFRSLIGTNNGIGSQGIILDGTEEQRRKYLPLLASGEIVGAFALTEPNAGSDASSLRTTARREGDVYVLNGTKRFITNAPEAGLFTVMARTNPDEKGAAGISAFLVEAGTPGLIIGPSDRKMGQKGTHTADVLFEDCRVPATQLLGGVEGQGFKTAMKVLDRGRLHIAAVCVGVAERLIRESLRYAMEREQFGKPIAEFQLIQAMLADSRMEAYAARCMVLDAARRRDEGQNISTEASCCKLFASEMVGRVADRAVQIFGGAGYIADYGIERFYRDVRLFRLYEGTSQIQQLVIARNMMREAS
>NZ_CP006003.1|WP_082164923.1|548854_549706_-|IclR-family-transcriptional-regulator
MRRFAAPSSPPSDAGAPFVESLEQVSEEEVKDRQFVTALARGLEILRAFTPQRPMLGNQELAASTGLPKPTISRLTHTLTRLGYLTYSERLGKYQLGTRVLALGFAALSNMGVRDVARPLMQDLADYANVPVSLGSRDRLNVVYVEHCRSTAAVTLRLDIGSRLPLATTAMGRALLAALPEGERRYLMGHMAKREPEKWPRIQASIEQALEEYRTHGFTLSVGDWDRDVNAVGVPFVAPDGSGLLAFNCGGPSFLLPRQRLLLDIGPRLVNLVRNVEAALQHR
>NZ_CP006003.1|WP_046710585.1|549812_550583_+|enoyl-CoA-hydratase
MSHVLVERPEEGIALVRLHRPEVRNALGLELRQELAAGFRELGADAAVRCIVLTGGPEFFAAGADLRALVDATPVDLLLRDTQRLWQSLAECPAPVIAAVNGFALGGGCELAMHADMIVAGESASFGQPEIRVGIMPGAGGTQRLTRAVGKFKAMKLLLTGEPMTAREAEAMGLVTEVVPDAEVLERALTLARKVAHMPPLAVRQIKEVVLAGQDASLAEALLLERKAFQLLFATRDQKEGMRAFLDKRKPAFEGR
>NZ_CP006003.1|WP_046710586.1|550584_552108_+|3-hydroxyacyl-CoA-dehydrogenase
MVDVQAPSLTLGLVGTGVMGRGIAQLAAQAGITVRLFDARPQAAEEARASVASTLDMLVTKGRLSPEEARAATARLEPVPYEASLAGCDVVVEAIVEDLGAKQALFTRLEGIVGPGCLLATNTSSLSVTSIASVCERPGRVGGFHFFNPVPLMKVVEVIEGARTEPWVGEALVLLARRLGHRPVRAADTPGFIVNHAGRGFGTEALRILQEGVASFEVIDRVLRDAAGFRMGSFELLDLTGLDVSHPVMESVYEQFYQEPRFRPSYVLRQRLTAGLLGRKSGQGFYSHEGGRPRAVPEPALPKGEQRPVWVAADEPGWREALLALVRAAGWFPDDGEHPAPESLCLLAPLGRDATTTALALELDPERTVAVDLLFGPERRRTVMTTPVTRPAFLDSALALLGADGTPVARIHDSTGFVAQRVLATVVNIACDIAQQRIASPEDIDAAVTLGLGYPLGPLAWGDALGPRRVLKVLEAIHAASGDPRYRASPWLSRRARLGVSLLTPER
>NZ_CP006003.1|WP_046710587.1|552113_553310_+|beta-ketoadipyl-CoA-thiolase
MSAYIYDGLRTPFGRHAGALAPIRPDDLLSGVIRALLTRGPFELGDIEDVVIGCTNQAGEDSRNVARHAALLAGLPIEVGGVTVNRLCGSGLAAVLDAARAVMTGQGELFVAGGVESMSRAPFVLPKAEAAFSRDTQVFDTTMGARFPNPRVVARFGGDTMPETADNIARDLGIGRAASDRFALASQQKFATAQARGFFTGELVPVELPGRKGAITTVSVDEHPRPETTLDKLSTLKPLAAEGVVTAGNASGINDGAAALLVGSICVGESVGCKPLARIVSAAVAGVPPRTMGLGPVPAARKALERAQLALSDMDVIEINEAFAVQVLGCLKLLELGEDDSRVNPNGGAIAVGHPLGASGARLALTAARQLQVSGGRYALVSMCIGVGQGIAAVLERV
>NZ_CP006003.1|WP_046710588.1|553342_554761_+|aldehyde-dehydrogenase-family-protein
MQVYDKLYIQGEWVASRGGGHIDVLSASTEEVMGRVPEGTAEDVDRAVRAARGAFEAWASLPIPERAAFLRRLQAGLTERQDALARTMTGEVGMPLALSKAIQVGTPITVTGTYVQLLQEHAFEEQVGNSLVVREPVGVVACITPWNYPLHQIVAKVAPALAAGCTVVLKPSEVAPLNAFMLAEILHEAGLPPGVFNLVSGTGPVVGEALVRHPEVDMVSFTGSTRAGRRVSELAAATVKRVSLELGGKSASIILADANLKNAVKRTVGNCFLNSGQTCTAHTRMLVPRALHEEAARLAAEVAASFTVGDPFQGEAKLGPVISEAQRARVREYIQQGLREGAKLVAGGPEQPEGLPKGYYVKPTIFAGVTPEMTIAREEIFGPVLAILPYDDEDDAVRIANSTIYGLAGGVWSEDVEHAKRIARRMRTGQVDINGGRFNPLAPFGGYRQSGNGRELGRYGLEEFQELKAMQL
>NZ_CP006003.1|WP_046710589.1|554793_555888_+|hypothetical-protein
MKAAVCFEKDVLTVTDVSFEPPKAREVLVRMVACGVCHTDLSVVNGTVKMKLPCVLGHEGAGIVEEVGEEVTHLRKGDKVVLSWVAQCGECYFCRIQRPNLCELGERINAGNRMPDGSTRLRKDSRELNVFSALGALSEYAVVPARAAVKLPEDAPLDKAALVGCAVTTGVGAVFNTAQMPPGATVAVFGTGGVGLNIIQGAVIAGAERIIAVDVHPKKLEFAKVFGATDVIDATSVDPVVGIRELTRGRGADYAYEAVGRKETIEQAYQCTRKAGTCVVVGVGSVKEQISLNVFVLPLFEKRLLGSWFGTADVHRDMPRLLDLYKQKKLKLDELVTTTYKLDQLDQAFTDMKNGVNARGVVLF

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Crispr_ID: NZ_CP006003_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP006003_4

614779-614869

Orphan

Consensus_repeat	Method
AGGCCCATGCCCGAGTCGGGGCGTGGGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP006003_4

>merge|NZ_CP006003|4|614779-614869|CRISPRCasFinder
AGGCCCATGCCCGAGTCGGGGCGTGGGCCTTCTGTCGTTGTACGGGCGTGACGCGAGGCGAGCAGGCCCATGTCCGAGTCGGGGCGTGGGC

>NZ_CP006003|4|4|614779-614869|CRISPRCasFinder
AGGCCCATGCCCGAGTCGGGGCGTGGGC	CTTCTGTCGTTGTACGGGCGTGACGCGAGGCGAGC
AGGCCCATGTCCGAGTCGGGGCGTGGGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP006003.1\|WP_046710632.1\|614538_614751_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046717336.1\|606669_607602_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223021
NZ_CP006003.1\|WP_052771414.1\|625089_626271_-\|cytochrome-P450	unknown	unknown	gnl\|CDD\|225035
NZ_CP006003.1\|WP_046710635.1\|616849_617308_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237019
NZ_CP006003.1\|WP_046710631.1\|613960_614413_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224974
NZ_CP006003.1\|WP_052770736.1\|624632_625070_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046710628.1\|609338_609995_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
NZ_CP006003.1\|WP_046710637.1\|622764_623028_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046710636.1\|620278_622747_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274598
NZ_CP006003.1\|WP_046710630.1\|612398_613673_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046710638.1\|623031_623877_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046710626.1\|605590_606676_+\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381306
NZ_CP006003.1\|WP_046710627.1\|607998_608760_-\|subclass-B1-metallo-beta-lactamase	unknown	unknown	gnl\|CDD\|293843
NZ_CP006003.1\|WP_046710629.1\|610199_612329_-\|glycogen-debranching-enzyme-GlgX	unknown	unknown	gnl\|CDD\|131155
NZ_CP006003.1\|WP_046717338.1\|617345_619820_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274598
NZ_CP006003.1\|WP_046717335.1\|605090_605489_-\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_CP006003.1\|WP_052770735.1\|608909_609290_-\|DUF4440-domain-containing-protein	unknown	unknown	gnl\|CDD\|379639
NZ_CP006003.1\|WP_046710641.1\|626485_627067_-\|phosphatase	unknown	unknown	gnl\|CDD\|183473
NZ_CP006003.1\|WP_046710639.1\|623880_624186_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046710634.1\|616003_616717_-\|MOSC-domain-containing-protein	unknown	unknown	gnl\|CDD\|225167

Protein	Function_ID	Function_description	E-value
NZ_CP006003.1\|WP_046717336.1\|606669_607602_-\|hypothetical-protein	gnl\|CDD\|223021	PHA03247, PHA03247, large tegument protein UL36; Provisional.	0.000644136
NZ_CP006003.1\|WP_052771414.1\|625089_626271_-\|cytochrome-P450	gnl\|CDD\|225035	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism].	1.04841e-101
NZ_CP006003.1\|WP_046710635.1\|616849_617308_-\|hypothetical-protein	gnl\|CDD\|237019	PRK11907, PRK11907, bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase.	0.00145593
NZ_CP006003.1\|WP_046710631.1\|613960_614413_-\|hypothetical-protein	gnl\|CDD\|224974	COG2063, FlgH, Flagellar basal body L-ring protein [Cell motility and secretion].	0.00181755
NZ_CP006003.1\|WP_046710628.1\|609338_609995_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	3.36922e-17
NZ_CP006003.1\|WP_046710636.1\|620278_622747_+\|hypothetical-protein	gnl\|CDD\|274598	TIGR03480, HpnN, hopanoid biosynthesis associated RND transporter like protein HpnN. The genomes containing members of this family share the machinery for the biosynthesis of hopanoid lipids. Furthermore, the genes of this family are usually located proximal to other components of this biological process. The proteins appear to be related to the RND family of export proteins, particularly the hydrophobe/amphiphile efflux-3 (HAE3) family represented by TIGR00921.	1.32722e-64
NZ_CP006003.1\|WP_046710626.1\|605590_606676_+\|aldo/keto-reductase	gnl\|CDD\|381306	cd19080, AKR_AKR9A_9B, AKR9A and AKR9B families of aldo-keto reductase (AKR). The AKR9A family includes Aspergillus nidulans sterigmatocystin biosynthesis dehydrogenase StcV, Aspergillus flavus norsolorinic acid reductase (NOR), and Phanerochaete chrysosporium aryl-alcohol dehydrogenase [NADP(+)] (AAD), are founding members of aldo-keto reductase family 9 member A1-3 (AKR9A1-3), respectively. StcV may be involved in the dehydration of 5'-hydroxyaverantin to form averufin. NOR is involved in aflatoxin biosynthesis. AAD (EC1.1.1.91) is involved in lignin degradation and reduces aromatic benzaldehydes to their respective alcohols in the presence of NADP(H). The AKR9B family includes Saccharomyces cerevisiae aryl-alcohol dehydrogenases AAD14p, AAD3p, AAD4p, and AAD10p, which are founding members of aldo-keto reductase family 9 member B1-4 (AKR9B1-4), respectively.	4.48283e-168
NZ_CP006003.1\|WP_046710627.1\|607998_608760_-\|subclass-B1-metallo-beta-lactamase	gnl\|CDD\|293843	cd16285, MBL-B1, metallo-beta-lactamases, subclass B1; MBL-fold metallo-hydrolase domain. MBLs (class B of the Ambler beta-lactamase classification) are a diverse group of metallo-enzymes that are capable of catalyzing the hydrolysis of a wide range of beta-lactam antibiotics. MBLs have been divided into three subclasses B1, B2 and B3, based on sequence/structural relationships and substrates, with the B1 and B2 MBLs being most closely related to each other. Subclass B1 enzymes are most active with two zinc ions bound in the active site, and have a broad-spectrum substrate profile. Includes chromosomally-encoded MBLs such as Bacillus cereus BcII, Bacteroides fragilis CcrA, and Elizabethkingia meningoseptica (Chryseobacterium meningosepticum) BlaB and acquired MBLs including IMP-1, VIM-1, VIM-2, GIM-1, NDM-1 and FIM-1.	2.2549e-101
NZ_CP006003.1\|WP_046710629.1\|610199_612329_-\|glycogen-debranching-enzyme-GlgX	gnl\|CDD\|131155	TIGR02100, Glycogen_operon_protein_GlgX_homolog, glycogen debranching enzyme GlgX. This family consists of the GlgX protein from the E. coli glycogen operon and probable equivalogs from other prokaryotic species. GlgX is not required for glycogen biosynthesis, but instead acts as a debranching enzyme for glycogen catabolism. This model distinguishes GlgX from pullanases and other related proteins that also operate on alpha-1,6-glycosidic linkages. In the wide band between the trusted and noise cutoffs are functionally similar enzymes, mostly from plants, that act similarly but usually are termed isoamylase. [Energy metabolism, Biosynthesis and degradation of polysaccharides].	0
NZ_CP006003.1\|WP_046717338.1\|617345_619820_-\|hypothetical-protein	gnl\|CDD\|274598	TIGR03480, HpnN, hopanoid biosynthesis associated RND transporter like protein HpnN. The genomes containing members of this family share the machinery for the biosynthesis of hopanoid lipids. Furthermore, the genes of this family are usually located proximal to other components of this biological process. The proteins appear to be related to the RND family of export proteins, particularly the hydrophobe/amphiphile efflux-3 (HAE3) family represented by TIGR00921.	3.62295e-72
NZ_CP006003.1\|WP_046717335.1\|605090_605489_-\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	1.46894e-11
NZ_CP006003.1\|WP_052770735.1\|608909_609290_-\|DUF4440-domain-containing-protein	gnl\|CDD\|379639	pfam14534, DUF4440, Domain of unknown function (DUF4440).	2.09677e-21
NZ_CP006003.1\|WP_046710641.1\|626485_627067_-\|phosphatase	gnl\|CDD\|183473	PRK12361, PRK12361, hypothetical protein; Provisional.	2.60641e-12
NZ_CP006003.1\|WP_046710634.1\|616003_616717_-\|MOSC-domain-containing-protein	gnl\|CDD\|225167	COG2258, COG2258, Uncharacterized protein conserved in bacteria [Function unknown].	5.34816e-71

>NZ_CP006003.1|WP_046710632.1|614538_614751_+|hypothetical-protein
MSKKDVLNIPTENLPTIPKRDAGAEDEATRRAPKTLDPHTGPGGTPGVDDTPRIIEPKTTPGRYPGVSVS
>NZ_CP006003.1|WP_046710631.1|613960_614413_-|hypothetical-protein
MRRLLAVLAVLQLAACATTHTNDPQNPPPPVPRPNPPDASEARRLGIEADKLLEDGRYEDALFLYRRAWNDGFRHPDGLYYAGVIAARAGSLDECVIWLERAADEGFSATQSLTTEPSLEAVRTHASWSRIAEKVAANARKDAPAATTQN
>NZ_CP006003.1|WP_046710630.1|612398_613673_-|hypothetical-protein
MSLKLLLAGWRGGDAPLSLTSENARTWLGQVERWFQANASEWLESSRFGTGPRGAPQLRLRLHPAAGEVSFLAASGSRVVISAETSAVGPGYHVFLCDTLKAMGQALDIQWVQADDTLDVGDPTGYFHTGDAGPVEVYMLAWLQETVAQVLRMRSLGESGFSMSLRFGHMFEHPGALLTPLGPRDERWMRRVYEDPRVGMDVFPWWRQGVGAHARLGRALCRLWTEVVWRPPLLEEERRLLRDVARSLELAWREDPELAYPWREWREVLGYLGVGGTLAETVHHHADQHGARGPSIGYRRGAVQVALPAGWEIRIPGSLAEAHLEDGTWVARDHRRSVRFVPLEDDAEEHFATTTAERRALELEYQGERVSGRASLHMEPGECRLTALCSSGRHRALCVVSFADPEEEDWALGTWRSLDHAAAA
>NZ_CP006003.1|WP_046710629.1|610199_612329_-|glycogen-debranching-enzyme-GlgX
MSREVWPGKPWPRGATFDGTGVNFAVFSQAATRIEVCLFDPANPTREIERFTLPEATDFVHHGYVPGLEPGALYGLRVHGPYEPAKGHRCNPHKLLVDPYAKALYGEVDWKQPVFGYPLGHAQQDLARDERDSAAGVPKSVVVSDYFDWGNDRRPEIPWRKTVIYEAHVRGLTMRHPEVPEHLRGTYAGLSSPPIIEHLKKLGVTSVELLPIHAFADDSFLDDKKLSNFWGYNTLGFFAPEQYYASRKTPGSAVAEFKAMVRALHAAGLEVILDVVYNHTCEGNHLGPTLSLKGIDNASYYWLMPDARYYLDFTGCGNSVNASNPNGARLIVDSLRYWVDEMHVDGFRFDLATVLGRTGEGGFDPRAALFQILQQDPVLSRVKLIAEPWDVGLGGYQVGGFPAPWREWNGKYRDALRRYWKGDENLAGEVGYRLTGNSDLYAEARRKPQASINFVTAHDGFTLHDLVTYSHKHNEANGEHNRDGADDNQSWNCGVEGETDDVSVVSLRERQKRNLLASLFMSTGVPMIVAGDEMGRTQQGNNNAYCQDNELSWVDWSLDERRQKLLAFTQKLIHFRHRQPVLQRRRYFKGAHLWDSEHKDLAWFRPDGSEMGEEDWQKPFVRSLAFLLGGDAIPTPDERGQRIIGDALLVLLNAHHEPVAYTLPALTDGQKWELELYTADDAKGAEKIPAQGRFELEGRSMAVFRQVER
>NZ_CP006003.1|WP_046710628.1|609338_609995_-|class-I-SAM-dependent-methyltransferase
MSRGSSPQEEAVRAIYGEIASAYEALFPVLSRYEDRVERFLADAVSPGCRVLDVGCGPGLHTKSLESSVRVVGTDLSPQMLDLARQARPSGEWYTHDYYQPFPTEWGRFQVALALGCLDFCDDLRRVLRHIADMLAPGGRLLFTALERRPGHEGHEAPTRQVQTAGPAVTLHLYSFEETARAVTDAGLEPRAYVHAPGWVQLAEERTLWFGWWEVERR
>NZ_CP006003.1|WP_052770735.1|608909_609290_-|DUF4440-domain-containing-protein
MMTEEDILAAEETLRRAMLASDVDMLDQLLSEDLVFVNHLGQVFDKDADLEGHGSGALRLTRLELGEPVIRFLSAGAVVVVQASVAGQSAGADFAAQLRYTRVWQWVDERPQVVAGHCTVITGASN
>NZ_CP006003.1|WP_046710627.1|607998_608760_-|subclass-B1-metallo-beta-lactamase
MNSRSLRVLVPLLVLTQSCTSAPVRPTTAEAAREAGASEYILAKDITVRRIAPGVWMHTTLSDEDFGLVPANGLIVEDGDGSLLVDTGWNQRQAEQLADWAANTLGKPVRAAVATHFHDDRTAGIPVLSERGIPVHGLEDTVKLAKERGKPVPTRSFTEVATLGPLELFFPGAGHAPDNIVVVHRDSQVMFGGCFVKDAAAKDLGNLGDAVVSAWPASLERVQARYPDTRIIVPGHGAPGGPELLSHTRALLR
>NZ_CP006003.1|WP_046717336.1|606669_607602_-|hypothetical-protein
MAASGCASVKVEQRDGCWVKQTRTFPSTFREEVGPCSRPKPEWSADRLTRLVQECVMHADYRWQSSAMVAWNRGEPLPVREPDEKVLEACMVTTERMLSAEKGALEAQLSDVSKERDSLRANQEQEREQYRAKLDAQRDAAQAELLKERERLQDSMDQQRAHSQASLDRARDQMHESNGRLATALGEAAKRPTPSAVATATSSSTSEGRSDTRSDSQSRGDSRSRGDATPPRVARPTVATPASSMCSLPAKRGASRTTTSSDAEAAQEPASCQPMTPAEPPEAEPALVPPAQSQTTASVPLPLLPRLQPQ
>NZ_CP006003.1|WP_046710626.1|605590_606676_+|aldo/keto-reductase
MPLNHYVTLGRSGLRVSPLCLGAMTFGEDLGWGSSVEESQQIIDRYIELGGNFIDTANFYTKSHSEKILGDHVGRHPSRRDRLVLATKFSGNLYPGDPNGGGSGRKSIIAAAENSLRRLQTDYIDLYWLHNWDIHTPIEETMAALEDLVRAGKVRYLGVSDTPAWKIAQANVMAHFRGWSSFIGLQIEYSLLERSVEQELVPMALELGLGITPWSPLKSGALSGKYTRANAGQQKGDRGAFVESYLNEKTYALVDALGVIAKEQGSTIARVALAWVQAQPGVSSTIIGARRLSQLEDNVGALEVKLSAEQLGRLDALSKPTFGFPQSMQPIFPAIHNGGTTVNGVFMEPSPFGVVKGEKPY
>NZ_CP006003.1|WP_046717335.1|605090_605489_-|MarR-family-transcriptional-regulator
MDPARIWSLNHRLLMSVIASVASDIAALGVETKELFVLAEVDEHPYPAELAASLCIPKPSVTLYVKRLEAAGFLRREIDTADLRRHRLQLTSAGRKVMQQGTTLLSEAFGTKLGRLTAAQQAELRALLEKMS
>NZ_CP006003.1|WP_046710634.1|616003_616717_-|MOSC-domain-containing-protein
MQTQTPRILSLHVGLPRELGTPGAADPMERPWTSGIHKAPVTGPVWLTRTGLTGDGQADLRVHGGPEKAVLAYAASHHAFWREQLGRDDLGPGAFGENWVVSGGAEESVCIGDVLKVGTALVQVSQPRQPCWKPARRWRHKELALLIQRTGRTGWYFRVLQEGEVRAGDALELVERPHPRFTVAFANQAMHEHRAEDAAALAACPLLTPKWRESLHRRAQGNRGDDAPRLTGPNSDG
>NZ_CP006003.1|WP_046710635.1|616849_617308_-|hypothetical-protein
MVKHMRRWMWAGAMAGTLALGTACSATEAPVMVAQADPSTTTSEPATGGSGTTTTTPSPTTTDPMTQDPTQSAPGTVPSTPDTNPGSTTTMPGDTTTAPGSTSTAPGSMPTFDGDAGMGGSGPTTVPGPADDNASGTFTPPAGGSVLDGGTY
>NZ_CP006003.1|WP_046717338.1|617345_619820_-|hypothetical-protein
MERGLGALAARSHRRPVLALGLAVLLAAVGGVLSLKLRLNANLVDLLPRSFESVQDLGELESRFGALGWVAVVGEGGDAASLRRFADDLAPQLEKLPGIRFVEKERTGAFFRDRALYFLSEEDLKEVHRRLEARLTWERQRANPLYVPLVDEPEPSLDFSDLEAKYGGAAGQKLSGAKDDYYLDAKAGRVVVLAKPETTSADLGYSRRIVDEVRGLVDAQDLSKYGPGFRVDITGTFQKKLDQQQQIVRDIAVSSAVATALMLLYLLFHFRSPVAVGLVLTPVGAGLAWTYGLVALLYGQVNLLTGFLGAILGGLGVEHGIHLLGRYLQLRAQGEDSERATRESFTHTGGAALVSALVAALTFFVLGTSRFRAFREFGVIAGIGMLVLVAAYVLVLPALLGLTARLGWRPRHARVAPRESSMGRVLVRHRVAITAISAVVLVGLFSQVPRVRFDYNFGTLEDQDLPSFVLDRQVNDIIGYSQTPVVVLTRDAEEEHAMASALAQRQRERGKDSTIDFVASLSSLVPQDQPRKQVVLRDIHALLENVPEERLSAEQRAQVAELRRQTQAQPFTLADLPASVRQQFTGREGTAGGFVLVYPAVNQSDGQAVRALAREIRGVTPPGGGRVSAAGESMVMADILDMVTHEAPLILGGATLAVLLAMWMTLGGLRMAVLCLLPTVVSLLALIGLMPVVGLEFNYLNILIIPVLIGTTVDAGVHLLTRLASPGSDFVAVYSETGRAIAGGLLTSAMGFGALFLARHPGLNSVGALASLGFATNLLVMLVAFPALLLVLTARGHRKRRARLDSEVKERAAAGGTGPEHATP
>NZ_CP006003.1|WP_046710636.1|620278_622747_+|hypothetical-protein
MGEKRWSERFEGAMGQLAARSHRRPMHAVVVAVVLTLLGAYFARNLTLSADFVGLLPKSFPSVQDIEKMRKRFGGQGNVVVVGMGAEPEALKRFVDDLSPKLAQLSEIRYVNSQRPSEFFNEHALYYVDLEDLKTIQGRIDARIAWEKEQANPLFVRLDEEPAPSVDFSDIEQKYTGRANQRLSGQGDLYYLDTTERMVVLMAKPKGSAADLNYSKKVVTQVEEFLATQDLSKYGPGFKTAVTGTFKKKIDQQRVIVSDLARASTLAMVLLVVYLVFHFRSALSVVLTMVPVMAGLGWTYGFVGLAYGQVNLLTGFLAAVLGGLGVEHGIHLLGRYGTLRSEGMTSEAAVQESFRHTGFSALIAALVAALTFLSLAMSEFRAFREFGIIAAVGMLVSIFAYVLILPALLGMASRFGWAPRAPEEGSGPMALLGRWLPRSYRGVAVVIGVGVVVLISQAYRISFNYDSRTLEDYKQASAVLDQKVNNILGYSQTPVVVLTDSQDMEREVVRQLEARKAARGKESTIDFVGALEDLVPRQQPEKQAVLEAIRTRLEKLDPERLPEDTRVALARALNMSKAKPFTQAELPASVRHQFESLDGSTGGVVLVYAGGGVSLSDGEGTRRFSKEVRGLQMPDGSQVSAAGEALILADILDMVSREGPRILAAAVLSVLAAMWLTLGKLRTALICMVPTLLSVAGLVGLMALLDLQFNYLNIMVLPVLVGTTVDAGVHLVQRLGEPGADFISVYAETGRAITGGLLTSAIGFVALVLAKHPGLNSIGDLANLGFGLNLVIVLLGFPSLLLLVERWRRKHSATAEEPAPGA
>NZ_CP006003.1|WP_046710637.1|622764_623028_+|hypothetical-protein
MMRSEALGWFAAVSMAVALVGCSHGGQREEKKGDTRCEESRNLSCITGTECSMDRDRGCEVCRCSPADALTPTDKRRPTAMEPERRW
>NZ_CP006003.1|WP_046710638.1|623031_623877_-|hypothetical-protein
MRETIEFRVEEAEASRLFRDDEGVVLPSGTVRKLTLPTDDERIPRVRELDRALRQQGKLFISGWRILRHYTPKELKSAELLELRLDAVFEPSGEECGTHYDESTSCALCGAGASQVTDLHLDTRRIPQRAGLARTLSHEWVISARLADLWRTHGITGADFRPILRAGPRAEPVKEWHQLVVTARPVDILPTTRTGNDPFDLDEANAQRCPKGHVVGLNVLSELSLRRGDHDGSDLTCTRQHVGMRSGVLRPHPLLLMSPKLHALLEDQKVKRLDVQVAHLA
>NZ_CP006003.1|WP_046710639.1|623880_624186_-|hypothetical-protein
MANLQVIQQARQLYFQRLKEAQARYPNSAGFQEHHLVPLYLGGAKSGATYRLPTAYHKAITQAFRERWAYGQERPAPDKLQLLLVQVYAQHPIPQLIGLQP
>NZ_CP006003.1|WP_052770736.1|624632_625070_-|hypothetical-protein
MSTTSWLVTAAIICGPVFLSGCSLLGHYKPKQAERAPAAESAKVTFPDSFEQGTHLDGPAMVALEVAMNTFLPPDRRPEARDEALSRCLARRDTYDTTVLKENDDLYFVSFLPRLSRCGIELETPIMDAGAVYAIDARGRILAEL
>NZ_CP006003.1|WP_052771414.1|625089_626271_-|cytochrome-P450
MGLFTDDVRRNPFALYAELRERSPLLHEPRADLWLLFDYDSVKRALQDHEVFSSVVTTVTGRTPDWLLFSDPPRHTKLRGIIMRAFTPRSIANLEPHVRELSRGLLGPLVGRGEMDVVAEYSSQLPTMVIAEMIGIPVEDRARFLRWGDIIQKLSHTISEGEEAERARAENAAMRDEMRAYLSTILEERRREPRDDLLTRLVEAEVDGERLDEKELLGFFQLLLAAGTETTTDLIDNALLCFLEHPDQLARLRRQPELLGSAIEEVLRFRSPAQSMYRSTKRAVELNGRVIPAGKFVLPMIGSANRDPGHFEEPERFDIGREPNPHLAFGHGIHFCLGAALSRMEARVALTDLLEMLGDFRLASDAPWEPRQALHIHGPRRLPLRFDPGVLRS
>NZ_CP006003.1|WP_046710641.1|626485_627067_-|phosphatase
MSVSLLRDVHHVPGVRGWVRKQVLRSVARCVEWTTKLPGQGLNVSQVNEWLHVGGSVSPSRYAELKARGITAVIDLRAERVDDAKALAALGIELLNLPVTDRYPPSVEQLVQGVEWALPRLEKGGHLYAHCEHGVGRGPLMGLAVMVAKGWEAPEAYRALRKARWQCTLNDRQLGGLADFVSAWVARRSGRAA

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Crispr_ID: NZ_CP006003_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP006003_5

808853-808944

Orphan

Consensus_repeat	Method
TGCCTGGACGACTGCGGCTACTGCGGCGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP006003_5

>merge|NZ_CP006003|5|808853-808944|CRISPRCasFinder
TGCCTGGACGACTGCGGCTACTGCGGCGACAGCTACTGCGCGAGCACGGAGAACTGGAGTTCGTGCCTGGACGACTGCGGCTTCTGCGGCGA

>NZ_CP006003|5|5|808853-808944|CRISPRCasFinder
TGCCTGGACGACTGCGGCTACTGCGGCGA	CAGCTACTGCGCGAGCACGGAGAACTGGAGTTCG
TGCCTGGACGACTGCGGCTTCTGCGGCGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP006003.1\|WP_046710752.1\|795239_795944_+\|phosphatase-PAP2-family-protein	unknown	unknown	gnl\|CDD\|239486
NZ_CP006003.1\|WP_046710757.1\|804134_806096_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379311
NZ_CP006003.1\|WP_046717370.1\|811728_812427_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237030
NZ_CP006003.1\|WP_046710766.1\|819438_820527_-\|DNA-ligase	unknown	unknown	gnl\|CDD\|181662
NZ_CP006003.1\|WP_046710756.1\|802862_804017_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046710755.1\|801177_802866_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|293789
NZ_CP006003.1\|WP_052770746.1\|812546_814220_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|341066
NZ_CP006003.1\|WP_046710767.1\|820671_821217_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046710764.1\|817711_818137_-\|PilZ-domain-containing-protein	unknown	unknown	gnl\|CDD\|377796
NZ_CP006003.1\|WP_046710753.1\|796148_797897_+\|histone-deacetylase	unknown	unknown	gnl\|CDD\|212519
NZ_CP006003.1\|WP_046710763.1\|815706_817725_+\|alkaline-ceramidase	unknown	unknown	gnl\|CDD\|368090
NZ_CP006003.1\|WP_046710765.1\|818376_819246_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235080
NZ_CP006003.1\|WP_046710759.1\|806711_807875_+\|VCBS-repeat-containing-protein	unknown	unknown	gnl\|CDD\|379232
NZ_CP006003.1\|WP_082164940.1\|809995_811591_-\|peptidase-M4-family-protein	unknown	unknown	gnl\|CDD\|341060
NZ_CP006003.1\|WP_046717369.1\|809109_809904_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238035
NZ_CP006003.1\|WP_046710758.1\|806325_806703_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046710754.1\|797935_798595_+\|acyltransferase	unknown	unknown	gnl\|CDD\|100053
NZ_CP006003.1\|WP_046710751.1\|794539_795106_-\|pyridoxamine-5'-phosphate-oxidase-family-protein	unknown	unknown	gnl\|CDD\|334450
NZ_CP006003.1\|WP_046710762.1\|814386_815223_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238035
NZ_CP006003.1\|WP_052770745.1\|798724_800872_+\|histidine-kinase	unknown	unknown	gnl\|CDD\|236901

Protein	Function_ID	Function_description	E-value
NZ_CP006003.1\|WP_046710752.1\|795239_795944_+\|phosphatase-PAP2-family-protein	gnl\|CDD\|239486	cd03392, PAP2_like_2, PAP2_like_2 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.	1.65154e-48
NZ_CP006003.1\|WP_046710757.1\|804134_806096_-\|hypothetical-protein	gnl\|CDD\|379311	pfam13646, HEAT_2, HEAT repeats. This family includes multiple HEAT repeats.	7.12003e-12
NZ_CP006003.1\|WP_046717370.1\|811728_812427_-\|hypothetical-protein	gnl\|CDD\|237030	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.	0.000208753
NZ_CP006003.1\|WP_046710755.1\|801177_802866_+\|hypothetical-protein	gnl\|CDD\|293789	sd00042, LVIVD, LVIVD repeat. LVIVD repeats are mainly found in bacterial and archaeal cell surface proteins, many of them hypothetical. Structurally, LVIVD repeats have been predicted to form a beta-propeller, with each repeat forming one four-stranded anti-parallel beta-sheet blade.	3.63439e-27
NZ_CP006003.1\|WP_052770746.1\|812546_814220_-\|hypothetical-protein	gnl\|CDD\|341066	cd09603, M1_APN_like, Peptidase M1 family similar to aminopeptidase N catalytic domain. This family contains mostly bacterial and some archaeal M1 peptidases with smilarity to the catalytic domain of aminopeptidase N (APN; CD13; alanyl aminopeptidase; EC 3.4.11.2), a type II integral membrane protease belonging to the M1 gluzincin family. APN preferentially cleaves neutral amino acids from the N-terminus of oligopeptides and, in higher eukaryotes, is present in a variety of human tissues and cell types (leukocyte, fibroblast, endothelial and epithelial cells). APN expression is dysregulated in inflammatory diseases such as chronic pain, rheumatoid arthritis, multiple sclerosis, systemic sclerosis, systemic lupus erythematosus, polymyositis/dermatomyosytis and pulmonary sarcoidosis, and is enhanced in tumor cells such as melanoma, renal, prostate, pancreas, colon, gastric and thyroid cancers. It is predominantly expressed on stem cells and on cells of the granulocytic and monocytic lineages at distinct stages of differentiation, thus considered a marker of differentiation. Thus, APN inhibition may lead to the development of anti-cancer and anti-inflammatory drugs. APNs are also present in many pathogenic bacteria and represent potential drug targets. Some APNs have been used commercially, such as one from Lactococcus lactis used in the food industry. APN also serves as a receptor for coronaviruses, although the virus receptor interaction site seems to be distinct from the enzymatic site and aminopeptidase activity is not necessary for viral infection. APNs have also been extensively studied as putative Cry toxin receptors. Cry1 proteins are pore-forming toxins that bind to the midgut epithelial cell membrane of susceptible insect larvae, causing extensive damage. Several different toxins, including Cry1Aa, Cry1Ab, Cry1Ac, Cry1Ba, Cry1Ca and Cry1Fa, have been shown to bind to APNs; however, a direct role of APN in cytotoxicity has been yet to be firmly established.	6.28398e-15
NZ_CP006003.1\|WP_046710764.1\|817711_818137_-\|PilZ-domain-containing-protein	gnl\|CDD\|377796	pfam07238, PilZ, PilZ domain. PilZ is a c-di-GMP binding domain which is found C terminal to pfam07317. Proteins which contain PilZ are known to interact with the flagellar switch-complex proteins FliG and FliM. This interaction results in a reduction of torque generation and induces CCW motor bias. This domain forms a beta barrel structure.	0.000408068
NZ_CP006003.1\|WP_046710753.1\|796148_797897_+\|histone-deacetylase	gnl\|CDD\|212519	cd09993, HDAC_classIV, Histone deacetylase class IV also known as histone deacetylase 11. Class IV histone deacetylases (HDAC11; EC 3.5.1.98) are predicted Zn-dependent enzymes. This class includes animal HDAC11, plant HDA2 and related bacterial deacetylases. Enzymes in this subfamily participate in regulation of a number of different processes through protein modification (deacetylation). They catalyze hydrolysis of N(6)-acetyl-lysine of histones (or other proteins) to yield a deacetylated proteins. Histone deacetylases often act as members of large multi-protein complexes such as mSin3A or SMRT/N-CoR. Human HDAC11 does not associate with them but can interact with HDAC6 in vivo. It has been suggested that HDAC11 and HDAC6 may use non-histone proteins as their substrates and play a role other than to directly modulate chromatin structure. In normal tissues, expression of HDAC11 is limited to kidney, heart, brain, skeletal muscle and testis, suggesting that its function might be tissue-specific. In mammals, HDAC11 proteins are known to be involved in progression of various tumors. HDAC11 plays an essential role in regulating OX40 ligand (OX40L) expression in Hodgkin lymphoma (HL); selective inhibition of HDAC11 expression significantly up-regulates OX40L and induces apoptosis in HL cell lines. Thus, inhibition of HDAC11 could be a therapeutic drug option for antitumor immune response in HL patients.	4.28759e-81
NZ_CP006003.1\|WP_046710763.1\|815706_817725_+\|alkaline-ceramidase	gnl\|CDD\|368090	pfam04734, Ceramidase_alk, Neutral/alkaline non-lysosomal ceramidase, N-terminal. This family represents N-terminal domain of a group of neutral/alkaline ceramidases found in both bacteria and eukaryotes. The EC classification is EC:3.5.1.23. The enzyme hydrolyzes ceramide to generate sphingosine and fatty acid. The enzyme plays a regulatory role in a variety of physiological events in eukaryotes and also functions as an exotoxin in particular bacteria. This N-terminal domain carries two metal-binding sites, the first for Zn2+ residing within the domain, and the second, for Mg2+/Ca2+ lying at the interface between the two domains.	0
NZ_CP006003.1\|WP_046710765.1\|818376_819246_-\|hypothetical-protein	gnl\|CDD\|235080	PRK02868, PRK02868, hypothetical protein; Provisional.	0.000327236
NZ_CP006003.1\|WP_046710759.1\|806711_807875_+\|VCBS-repeat-containing-protein	gnl\|CDD\|379232	pfam13517, VCBS, Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella. This domain of about 100 residues is found in multiple (up to 35) copies in long proteins from several species of Vibrio, Colwellia, Bradyrhizobium, and Shewanella (hence the name VCBS) and in smaller copy numbers in proteins from several other bacteria. The large protein size and repeat copy numbers, species distribution, and suggested activities of several member proteins suggests a role for this domain in adhesion (TIGR).	7.5361e-08
NZ_CP006003.1\|WP_082164940.1\|809995_811591_-\|peptidase-M4-family-protein	gnl\|CDD\|341060	cd09597, M4_TLP, Peptidase M4 family including thermolysin, protealysin, aureolysin, and neutral protease. This peptidase M4 family includes several endopeptidases such as thermolysin (EC 3.4.24.27), aureolysin (the extracellular metalloproteinase from Staphylococcus aureus), neutral protease from Bacillus cereus, protealysin, and bacillolysin (EC 3.4.24.28). Typically, the M4 peptidases consist of a presequence (signal sequence), a propeptide sequence, and a peptidase unit. The presequence is cleaved off during export while the propeptide has inhibitory and chaperone functions and facilitates folding. The propeptide remains attached until the peptidase is secreted and can be safely activated. All peptidases in this family bind a single catalytic zinc ion which is tetrahedrally co-ordinated by three amino acid ligands and a water molecule that forms the nucleophile on activation during catalysis. The active site is found between two sub-domains; the N-terminal domain contains the HEXXH zinc-binding motif while the helical C-terminal domain, which is unique for the family, carries the third zinc ligand. These peptidases are secreted eubacterial endopeptidases from Gram-positive or Gram-negative sources that degrade extracellular proteins and peptides for bacterial nutrition. They are selectively inhibited by Steptomyces metalloproteinase inhibitor (SMPI) as well as by phosphoramidon from Streptomyces tanashiensis. A large number of these enzymes are implicated as key factors in the pathogenesis of various diseases, including gastritis, peptic ulcer, gastric carcinoma, cholera and several types of bacterial infections, and are therefore important drug targets. Some enzymes of the family can function at extremes of temperatures, while some function in organic solvents, thus rendering them novel targets for biotechnological applications. Thermolysin is widely used as a nonspecific protease to obtain fragments for peptide sequencing. It has also been used in production of the artificial sweetener aspartame.	1.17652e-110
NZ_CP006003.1\|WP_046717369.1\|809109_809904_-\|hypothetical-protein	gnl\|CDD\|238035	cd00081, Hint, Hedgehog/Intein domain, found in Hedgehog proteins as well as proteins which contain inteins and undergo protein splicing (e.g. DnaB, RIR1-2, GyrA and Pol). In protein splicing an intervening polypeptide sequence - the intein - is excised from a protein, and the flanking polypeptide sequences - the exteins - are joined by a peptide bond. In addition to the autocatalytic splicing domain, many inteins contain an inserted endonuclease domain, which plays a role in spreading inteins. Hedgehog proteins are a major class of intercellular signaling molecules, which control inductive interactions during animal development. The mature signaling forms of hedgehog proteins are the N-terminal fragments, which are covalently linked to cholesterol at their C-termini. This modification is the result of an autoprocessing step catalyzed by the C-terminal fragments, which are aligned here.	3.89153e-05
NZ_CP006003.1\|WP_046710766.1\|819438_820527_-\|DNA-ligase	gnl\|CDD\|181662	PRK09125, PRK09125, DNA ligase; Provisional.	2.76652e-132
NZ_CP006003.1\|WP_046710754.1\|797935_798595_+\|acyltransferase	gnl\|CDD\|100053	cd04647, LbH_MAT_like, Maltose O-acyltransferase (MAT)-like: This family is composed of maltose O-acetyltransferase, galactoside O-acetyltransferase (GAT), xenobiotic acyltransferase (XAT) and similar proteins. MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates. MAT acetylates maltose and glucose exclusively while GAT specifically acetylates galactopyranosides. XAT catalyzes the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and streptogramin, among others. XATs are implicated in inactivating xenobiotics leading to xenobiotic resistance in patients. Members of this family contain a a left-handed parallel beta-helix (LbH) domain with at least 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). They are trimeric in their active form.	1.77516e-39
NZ_CP006003.1\|WP_046710751.1\|794539_795106_-\|pyridoxamine-5'-phosphate-oxidase-family-protein	gnl\|CDD\|334450	pfam01243, Putative_PNPOx, Pyridoxamine 5'-phosphate oxidase. Family of domains with putative PNPOx function. Family members were predicted to encode pyridoxamine 5'-phosphate oxidase, based on sequence similarity. However, there is no experimental data to validate the predicted activity and purified proteins, such as yeast YLR456W and its paralogs, do not possess this activity, nor do they bind to flavin mononucleotide (FMN). To date, the only time functional oxidase activity has been experimentally demonstrated is when the sequences contain both pfam01243 and pfam10590. Moreover, some of the family members that contain both domains have been shown to be involved in phenazine biosynthesis. While some molecular function has been experimentally validated for the proteins containing both domains, the role performed by each domain on its own is unknown.	2.45292e-08
NZ_CP006003.1\|WP_046710762.1\|814386_815223_-\|hypothetical-protein	gnl\|CDD\|238035	cd00081, Hint, Hedgehog/Intein domain, found in Hedgehog proteins as well as proteins which contain inteins and undergo protein splicing (e.g. DnaB, RIR1-2, GyrA and Pol). In protein splicing an intervening polypeptide sequence - the intein - is excised from a protein, and the flanking polypeptide sequences - the exteins - are joined by a peptide bond. In addition to the autocatalytic splicing domain, many inteins contain an inserted endonuclease domain, which plays a role in spreading inteins. Hedgehog proteins are a major class of intercellular signaling molecules, which control inductive interactions during animal development. The mature signaling forms of hedgehog proteins are the N-terminal fragments, which are covalently linked to cholesterol at their C-termini. This modification is the result of an autoprocessing step catalyzed by the C-terminal fragments, which are aligned here.	4.8878e-06
NZ_CP006003.1\|WP_052770745.1\|798724_800872_+\|histidine-kinase	gnl\|CDD\|236901	PRK11360, PRK11360, two-component system sensor histidine kinase AtoS.	4.74432e-57

>NZ_CP006003.1|WP_046710759.1|806711_807875_+|VCBS-repeat-containing-protein
MFRYFSLGWACCALLACSSSTISPRGFPDVQWLGFTEARVTHAAGGTQARGLHTADVDGDGVKDLVLVASQTEQVCILDGAGKGAFAAPRCLSAGTTPMDVAVSDVNADRRPDLLIVGHFANALTVRLGASDGTFREGVPHSLGNHSQQVRVADLDGDGLVDAMTKNAGSGGYFNITFLKGKGDGTFGAAVPHSVTGLPRDLVLADVNADGRPDVLVLNTNSFTVDVLLATARGELSAAAPVRFAGSADDEPFRLVSMDVNGDGLLDLVISHSVSDSGYLSVHLGDGRGGFTEASSLPADAPGEMVVADFNQDGREDVAFAGLAGGVYLLLGEEAGLLGAPSLVAAGTTPSSLVAEDLDQDGFPDLAWTTRDSVEVLLGSTVRVPRR
>NZ_CP006003.1|WP_046710758.1|806325_806703_+|hypothetical-protein
MACGSREQAPPPLVLGASVQSMRGCPAARSASVQDSCMAGCHLGCGDGVCQDETEATCPIDCFCGDGVCTAEDVNSCPVDCGCPGSCAGACHTATLTSARHSCPREAVPGRLLPGDPFAIPDLRP
>NZ_CP006003.1|WP_046710757.1|804134_806096_-|hypothetical-protein
MRRKRLNVVALAAVLLLAGLGGVWWKNATDTTSSDPTAAHVRAKTHTLPSPGATASEPLAPQGRQPREPGTLHRHALTLGLTMSFTGQPAPQGAAPPGMRITLKGEWDEGLVSVEGAEVIARFQLRPTAFTLDVEGQGALSPETRQAMEAALSQPFFVTRDARGAVTLTHFEQGVDELAMGLLRSVVATSQFVREGAPTSTWRTEEQDTSGQYSAEYQRQGERRFDKRKREYTAAATPQGLQPLGTSPRMSVSGGATFELGEDGGLQSLQSREQLTVESGQGMPTVTNAMELTLRLLERRQEPTLVGAFAARSGRLRAAALASFQGQAADPLAHHRQVLGKRRLEDILADLLSLPSDEKARDDARTRALEQLRALLLLRPEEAARIPALLRTQGLSPLAASSMLGALSAASTPESLRALVQATGDTALTSDVRMDAVSALGMADNPIREGVDTLRQLSRTDDPKLRGTATLALGNAALQMSDTAGRDAEALVQELKSDYRAARDADQRALLLRSLGNTRSPGVLDTLTEALRSDSSRVREAALVALRNIPGPEADRLLLERLVNDTASEVRRAAVFACGFRPLEPLLLPVLGQALREDTSDGVRSDILQLLGQHRHATPGALALLRWASQHEKNPDLRRMANTYVETPTTPQP
>NZ_CP006003.1|WP_046710756.1|802862_804017_-|hypothetical-protein
MNRAVSRALALMLVVVPGLVAAQSYVDSTPYVVQPSKYPFVTYAPGYRLNDKVPWETQVAPFSPGASYSVTQEYAILQDETNRTGGQLQYDATDFTHNIDIQQATIPEAFTPMVPPPTEIMPWTNPSQTFNKSYVRTERFGNNLFGAGYHLNAVLTAETATVNADKKVVAVAEGKLFAQVFSSEHDLVRGRAQVVGQNGGDNSGTAALYVVGQEVWSTPLYATYAPPPINWSRTFFSASKTFMIGPVPVTVKGSLSGGVKLTVHGLVGPTVARLSATPGGWSNVTASASVDVIVVAIGVEGSLALINATLPASGEVFWPVCSLDWKLRTDLDLNALSGTLKAYAKVRVLFFKKTWWITIAQWAGITHKIPLLGVEGSQPLGICS
>NZ_CP006003.1|WP_046710755.1|801177_802866_+|hypothetical-protein
MPLFLRSSWVLSVTWGLLLCASPGCRDKTDPTPDAGSPVDSGTPDAGTPPWDGTYTVLEELGDGTGDPGVLAPCDVVPQVGESPAGGCLDPSVFDLSACDTSTLANVPADGIFHTRLRRETAQPDGGLVGSYYTVTMDLVGDGGPSKFYYAPVTHEVREADRLLLGVHTVGRDGGSTTTVLAGCEAPDHRSFTGCFARCTNGRVTQRATAHADRMLWREGEAESSGGLSLVSETYVAQGTPLDIYVAKNHAYVVSANAYLRPGKPGGITVFDVTDRSHPVLKKVISLPDDQLWNSVWVKGDALYVASQDTGIVVFDISDPADPKLVRRVPSSAPYAVHTVLVDGDRLYGMGLWPSSNTLVFDVSTPLEPVLLQRLAFPLAGAYDGAHDAFAYQGRLYISHFEGGLKVVDVTNPDAMPLLGTYTYPNTTAHHNAVGTFAGRTLVFEGGENHGAHLRVLDATDPANIVKIGEFRLRPTTSIHNILLVGSRLYVAWYQEGVRVLDVSNPTQPRQVAWYNTHRETDPERTDDVFEGAIGIRIPGDGYVYVVDTSRGLLILNELAGP
>NZ_CP006003.1|WP_052770745.1|798724_800872_+|histidine-kinase
MADERRDVGRVEALAQVPEASTSGLTARPASTDGGAAVARRLQSLEGLLSEVVFQLDAQGRVTYLGPGWEKLTGALGVVSQGHPLTDVVHGLDRESARHLLELVATQQVTDARQELRLFVGGESRWVVLTARGVPGQPGEVVGTLLDIDSRRRAEEAVATRERYLETMVEVQRRMMPHQDPRDLYTSVVEPLGRVSAASRVYVFEMHRAQNGALLASQRAEWCEPGIPPNLEDPNMHGLPLLEALWPEQAADLMRGEPVQGLPQDFTEVLTPMLEAQGVRSVLLLPLHVHGQLFGVIGFDNCREARPWGPIEVNLLSGAAGTLSLALEQRNDKALRVRTETTLRRTEAGVHLLLESFPDPVMVHVGDGVLLSVNPALVQYLGYRDASELLGRHVLELVREEDRSAAQLYLGQALEGKGAARAVEVPLVRRDGETVVADLVTLAVVFDGTPAWVTIARDFTERKRSQAQLMLADRMASMGLLAAGIAHELNNPLAYVLSNLDFLHATVGPRARPLTPDDLVECRQVLDDAREGAERMRQIVRQLRVFSRVDDTREEPVDVHRVLDSVAQMAASEVRPRARLVKSYGEVPPVRGNEGKLFQVFLNLVINAAHAIEEGQSETNEIRITTRPDDGARVLVEVRDTGGGIPPEHLRRIFDPFFTTKSAGIGTGLGLSICDTIVTALGGHISVESSVGVGTTFRVALHAAPPGISDVHRGL
>NZ_CP006003.1|WP_046710754.1|797935_798595_+|acyltransferase
MDLDALRREQHKRRLSWMPWLYFVLKPRHRGWAEAWQQEVQALLMELETVTIAEGCFVAPEARIFAEPGRTVALGPGCSIAAEAFVHGPVTLGPRVSLNARVSLDGGAAGIRVGEGTRIASGATLYAFDHGLAPDRPVRDQPVTSRGINVGADVWIGANAGVTDGVTIGDHAVVGMGAVVTRDVPPWAIVGGVPARVLGDRRERPRSGMPGGWEPGDQG
>NZ_CP006003.1|WP_046710753.1|796148_797897_+|histone-deacetylase
MSVWSWLGRWLPFARGEHVPIFYDEDYRLPLTGIETTVGVEPRGVDFTTWYLLEKHVVRPEDVYHPRQVSYAELSRVHDAAYLESLGQPETLARIYAVDPSEVPVDTLLSNVRLVCGGTLGAARLAFGRRGPVVNMAGGFHHAAPGRGGGFCAVNDIAVALAALQADGYEGQTVVLDLDAHPPDGTAECLAGHPKVWIGSLSGSDWGSLPEGVDETRVPEGVTDEQYLALLEAMLERMPKPRLAFVIAGCDVLAGDRFGRVGLTVKGARRRDELLARALRGVPSVWLPGGGYHAESWKVFAGTVLVLSGMAGRRIKARYDPMSARYRRISRMLSQEGAPLDEPLTLEDLEGSLGLGGAVQPRVLGFYTAQSLEYALFRYGLLWQVERLGYSRPRVEVSSTGAGDRIKVLGRAGGEEHLLVDVVVEKRSITGEPYFFVNWLSLRHPRARFSERRPQLPGQDVPGLGLAREATEMFVLMARRLGLAGVAFRPMWYHLAVVARARFRFADAARQGRFEAMMRDLASMPLLEATRAMAEGRVMLDGEPYRWEADDMVLPLEPIPVDTDTIAAERERHHFTVAPRLG
>NZ_CP006003.1|WP_046710752.1|795239_795944_+|phosphatase-PAP2-family-protein
MSDRNVAVTRLFGMLLLLAVCCLGFIALSDEVTEGETQDFDERVLRLLRSPEDPSLPRGPWWLRLTAEDVTSLGGAPVLFLVTLAVCGFLLLVRRYRTLLLVLVATVGGTLLNGLLKQFFSRPRPSVVPHLKEVMTTSFPSGHAMLSAIVYLTLGALLAQLTERRRLKAYILTVSLLLPLLVGLTRVYLGVHYPTDVLGGWVAGLAWALLTALSARGLRRRSPALREEARRQVE
>NZ_CP006003.1|WP_046710751.1|794539_795106_-|pyridoxamine-5'-phosphate-oxidase-family-protein
MATQYPHLEPLHRDFILRQRMFFTASAASTGRVNLSPKGLDSLRVLGPNEVVYLDLTGSGNETAAHLRADGRLTLMFCAFEGPPMILRLYGRGQVLHRGSAEYTRLLAHEFGGVEPLGARQMVKLDIDLVQKSCGYSVPLYEFTADRPTLTRWAESKGEDGLTEYRRKKNAHSIDGLPTGLFDEEESD
>NZ_CP006003.1|WP_046717369.1|809109_809904_-|hypothetical-protein
MSSTALAQLSTRCFQDDQLVTIELARGRNAWARKCGLITASREAYLNTENEYQVFTNGCFAYPAVPAGSTCSFHVPADEASACITGLNKLGTCVAGCTTPTQKVAFDGRMLPIPEAYASGVTTVTALSPTSEPGLLRYGEQTIRSYVAGDTQEDIFALETKEGRRLEVTAEHPMVLGDGTMVKARTLQAGDTLMGADGKTLHLTRVTVFSFKGQVWNVRPESQVKLENVMNAEGFLTGSVRFQNEWAQDDYRLSLRDEVDVGGL
>NZ_CP006003.1|WP_082164940.1|809995_811591_-|peptidase-M4-family-protein
MQSSTYPQDKERVVTRTWKLGLIGACCAMWGAGCGEAPVDPTRDNTPETRQAALAALGRVEVVDAGRDGTPSFIRGTLGTVDRSLVSLKAADALAPVLRGLAPVFGLRAEELTVRTSRTDELGYTHVRYDQTRHGVPVKGGELVVHVDDKGLVYAANGSARGAGEPSTLARLPLHAVTDAALEGLDTLKVEGEPRFVYFLGAEGPLSAAYEVLRVGTREDAPAKDRVYVDASSGRVLDVHPLIHGGLNRRVHSANNQWTTPGTLRRQEGGGATGDAHIDRNYDHIGTTYACYETIFGRDSFDDRGATITSTVHYGSAYVNAYWDGIQIVFGDGDNVNSGQLGLDLDVVSHEITHAVTQYESGLVYRNESGALNESLSDIAAAICESWARGGALDADVWKIGEDIWTPNISGDALRYMDNPTRDNSSRDFYPERYTGTADNGGVHWNSGIPNLVFKLLVTGGTHPRGKSGVNVGGIGMNRAAQTFYFAATTYFTSTTTMSQAKAYTVQAATDRYDASVVNSVRDAWSAAGVP
>NZ_CP006003.1|WP_046717370.1|811728_812427_-|hypothetical-protein
MYALVHPRSPSSPAPTETRAPPSPTAPQATRAAAPRPAAPTAQAASPKAAVPTDDAEQKTRREAARQSARQYRAGRFNAFFRKEVFVEELARDGASRIDGLRSELADPTALQQLPADARFMENKPEPVLERMAMIDLLFELAPNEPAARDAMTSLALSPIDSGLSEPVKKGLVGEKYDLLFRLAQVDRQLAVDTYTRLDNPRLKSLLREALMAGLAESGASPAEVQRMTAHL
>NZ_CP006003.1|WP_052770746.1|812546_814220_-|hypothetical-protein
MWALGALGCGPTVEPEEAHDALDAQSHPFVPLWPEGDFSARVTRYDYDFATQTGEAKSTLYLDVAPPGGDCFVVNAPQGLTGLRWNDAEPTRSESTEQGIRVCGRGQFAGQVKLEARYTVPLETYDFTQVGFSRRTDRGGNTFSYLLSWVESCDRFGPCDDRTDQLTQYVFTVKHLAGERVLCPGQLTRPDSTTTKCTLTGLTKAPTYSSFAVASNPAWRASTFTEQSSKFKVVFHEVTGGKLASSLVAADVKAYLNWVIGELGPLPYGTELRVAGAPTEWLGVEHPANLILREDLPDLRRDYANMTMHTLMHEVVHQWAGNRTTLSSPFDFVWKEAIAEYLTYRYERQGRPAGEAEQTRAYWDRLARTAAYYPQPEDDPAPVFLSYASDVYGTGPMLLFLQLEPLLGENIVLQAIKNFLSFPGDRSVADLRSALEQASGEDLGPYFDAWVHGGGDPDWPFFEVSHALEDGELTLTAVQRSVSGTAYPVSVDVLVEGATERRLVTLNYGLSPQSDTLSVTVPFPEPVVQVTVDPENRVVNRRFLGLDAEPAPARWLF
>NZ_CP006003.1|WP_046710762.1|814386_815223_-|hypothetical-protein
MKRLSYLVVLACAVLSTTASAQLSTRCFTDDQLTTYTLSQGRNNWSFRCGYITQAKRDFLNAEGEYQVYASGCYSFAATGPTATCTFFIPADENAPCIPGLVKLGTCVTGCYTAQEKVSFGGEYWPIADAYASGVRTVTALTKDASLVAPTTGEQAIRAFVAGETVEDVFALQTVDGRRVEVTSEHPMVLATGEMVKAKTLQAGDVLLGVRGEKVELQDVSVFRYEGTTWNVQPLSKEKIENVLDVEGLLTGSVRFQNEWADDHYRLSLRDEASVDGL
>NZ_CP006003.1|WP_046710763.1|815706_817725_+|alkaline-ceramidase
MRVHPVRLVLAWVLVWGTVAWGQGAAPGDCAGNTRFLVGAGLGDITGPAAEVGMMGYGQLSQQTAGLHQRLRSRAFVIVSPCNGRRVAIVSADLGMMFQAVKTQVVERLRARFGAVYSNDNVLLGATHTHSGPGGFSHHTFYNLTTFGFVPQNFEAIVSGIVTSIARAHSRLGEGTLRLEAGELVGASRNRSPEAYRLNPPAERARYVHDVDTRMTLLRLTRAEGGDVGLINWFAVHATSMGNDNHLISGDNKGLASYWFEKAHDKGDTFVAAFAQANAGDVTPNILGGTNGGGADDFEDTELSARKQHDFAARLWARATTPLVGGVDFRHTFVKMDAVDVAPEYADGKPRRTCPAAIGLSMLAGAEDGPGYGVEGASCAVIHDLWSQFTCALTTTPCQGEKPIVLEMGAMLPHPWSPDVLPLQLVTVGPLALVAVPFEVTTMAGRRLRRTVLERLGPRGIKEVVIVGLANDYAGYVATREEYARQSYEGASTHFGPWTLAALQQGFDSLAVGLGEGHPVPAGPLPTDLRFIQASLRPGVVYDDKLLWVGFGDVITDAKASYSRGDLVSVTFWGAHPKNDLRLEGTYLRVQRKGSIGAWVDVADDGDWETRYRWERESCVPTLGCSHVTVEWHIPRDAAPGTYRILHEGEWKSGWDARVRPYYGASRVFTVK
>NZ_CP006003.1|WP_046710764.1|817711_818137_-|PilZ-domain-containing-protein
MHCERCLSEHSDALPCPPAARRHAASRTSPHHPITRTPAPCDVRIQHPQGLQAHRVEVCKGGLFLGCEEPFPPLFTRLSLTLRLDGEDFTCEGEVVRHVDTAHARTWGSTAGIGVQLQPPPPRLRELLSRPHAPEDALTSP
>NZ_CP006003.1|WP_046710765.1|818376_819246_-|hypothetical-protein
MSSAVSEVAPTCAVHPLEDSVFVCDRCGSFGCTGCRGHPEATRCAPCVRRIREDPTAMAPTRLLRDACSLLLQHRVLLAGLFILQWLCLMGSGALLHLTQSTLPGITSLVAAELGLSILLMRSVARRLREQAGLPALDVSSPWVVLARIPLLFLMYVLTFLVVLGGSFLLVLPGVYMALCTSLAPAAVAVDGKGPLAALRLSYQLVRGHRRRLLGALLPVLVLMPVTDTVGSLLTDATEHLPAPFSVAADIVATLMVMASVTLHPLVLVLAYQRLLERQPVSRSSPERT
>NZ_CP006003.1|WP_046710766.1|819438_820527_-|DNA-ligase
MTRGTEGISVADLADGEQAEMKGSGAKPYILKNTGGVYSCSCPAWRNQSIGIERRTCKHLRKLRGEDAEAARVGGAEALPKATRVKTAKEAESGEDATEKAPPLLLAHPWENDVDLTDWWMSEKLDGVRAYWDGKRFWSRLGNEFFAPDWFTAGLPDFPLDGELFGGRKRFQRTVSVVRRQDKSQDWKELLFVVFDAPSVDAAFEQRLEHCRKWVDDTKPEYARWHPHERCQGTVHLRAELERVEGLGGEGLMLRQPGSRYEVGRSHTLLKVKSFKDDEAVVIGHVAGAGRHKGRLGALEVELRNGKRFSVGTGFSDAERASPPAIGTLITFRYQELSNDGVPRFPSYIGVRIDAAPFKAKG
>NZ_CP006003.1|WP_046710767.1|820671_821217_-|hypothetical-protein
MSRSNTPLTLSLLLTLALLSPGAAQAQEVEAGHCVLTLGRIDYSPALTLLPKNTTMTVRGVGTGCVGVNVASGEEVLETSWVEIVGSLTGNAGTLLSSYYGTITTTYHFADGTSQSSVVEGTCLLGISGICPILGVVTSGVDQGTLAEFTFIAPSIDILGPIPTLNFLDVATTRARLSQIR

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Crispr_ID: NZ_CP006003_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP006003_6

1125099-1125243

Orphan

Consensus_repeat	Method
CTCGGGCGCCGAGGACAGGGCCGCG	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP006003_6

>merge|NZ_CP006003|6|1125099-1125243|CRISPRCasFinder
CTCGGGCGCCGAGGACAGGGCCGCGTCGGACTCGGATGCCGAAGACAGGGCCGTGTCGGACTCGGGCGCCGAGGGCAGGGCCGCGCTGCGCTCACGCGATGAGGACAAGGCCGCGCGGAACGCGGACGATGAGGACAGGGCCGCG

>NZ_CP006003|6|6|1125099-1125243|CRISPRCasFinder
CTCGGGCGCCGAGGACAGGGCCGCG	TCGGACTCGGATGCCGAAGACAGGGCCGTGTCGGA
CTCGGGCGCCGAGGGCAGGGCCGCG	CTGCGCTCACGCGATGAGGACAAGGCCGCGCGGAA
CGCGGACGATGAGGACAGGGCCGCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP006003.1\|WP_046710982.1\|1119990_1120350_-\|PilZ-domain-containing-protein	unknown	unknown	gnl\|CDD\|377796
NZ_CP006003.1\|WP_046710977.1\|1112968_1113739_-\|urease-subunit-beta	unknown	unknown	gnl\|CDD\|215172
NZ_CP006003.1\|WP_046710980.1\|1118214_1119324_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224662
NZ_CP006003.1\|WP_046717412.1\|1128985_1129999_+\|lysylphosphatidylglycerol-synthetase-family-protein	unknown	unknown	gnl\|CDD\|377103
NZ_CP006003.1\|WP_046710985.1\|1127718_1128705_-\|alcohol-dehydrogenase	unknown	unknown	gnl\|CDD\|176645
NZ_CP006003.1\|WP_046710978.1\|1115113_1116304_+\|elongation-factor-Tu	unknown	unknown	gnl\|CDD\|183708
NZ_CP006003.1\|WP_046710992.1\|1138750_1139620_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_082164958.1\|1113824_1114715_-\|urease-accessory-protein-UreD	unknown	unknown	gnl\|CDD\|376611
NZ_CP006003.1\|WP_046710981.1\|1119320_1119980_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP006003.1\|WP_052770759.1\|1120431_1121124_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379195
NZ_CP006003.1\|WP_046710991.1\|1136126_1138748_+\|ligand-gated-channel-protein	unknown	unknown	gnl\|CDD\|238657
NZ_CP006003.1\|WP_046710979.1\|1116733_1117927_+\|elongation-factor-Tu	unknown	unknown	gnl\|CDD\|234596
NZ_CP006003.1\|WP_046710987.1\|1132233_1133136_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046710983.1\|1122802_1124233_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|275327
NZ_CP006003.1\|WP_046710988.1\|1133277_1134273_+\|ketoacyl-ACP-synthase-III	unknown	unknown	gnl\|CDD\|238426
NZ_CP006003.1\|WP_046710986.1\|1129931_1132148_-\|dehydrogenase	unknown	unknown	gnl\|CDD\|239163
NZ_CP006003.1\|WP_046710990.1\|1135278_1136082_+\|chemotaxis-protein-MotB	unknown	unknown	gnl\|CDD\|181619
NZ_CP006003.1\|WP_046710989.1\|1134598_1135150_+\|lipoprotein	unknown	unknown	gnl\|CDD\|374318
NZ_CP006003.1\|WP_046710984.1\|1126915_1127689_-\|3-oxoacyl-ACP-reductase	unknown	unknown	gnl\|CDD\|187600
NZ_CP006003.1\|WP_052770760.1\|1121181_1122603_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|199882

Protein	Function_ID	Function_description	E-value
NZ_CP006003.1\|WP_046710982.1\|1119990_1120350_-\|PilZ-domain-containing-protein	gnl\|CDD\|377796	pfam07238, PilZ, PilZ domain. PilZ is a c-di-GMP binding domain which is found C terminal to pfam07317. Proteins which contain PilZ are known to interact with the flagellar switch-complex proteins FliG and FliM. This interaction results in a reduction of torque generation and induces CCW motor bias. This domain forms a beta barrel structure.	1.26079e-11
NZ_CP006003.1\|WP_046710977.1\|1112968_1113739_-\|urease-subunit-beta	gnl\|CDD\|215172	PLN02303, PLN02303, urease.	6.60551e-135
NZ_CP006003.1\|WP_046710980.1\|1118214_1119324_+\|hypothetical-protein	gnl\|CDD\|224662	COG1748, LYS9, Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism].	4.49483e-06
NZ_CP006003.1\|WP_046717412.1\|1128985_1129999_+\|lysylphosphatidylglycerol-synthetase-family-protein	gnl\|CDD\|377103	pfam03706, LPG_synthase_TM, Lysylphosphatidylglycerol synthase TM region. LPG_synthase_TM is the N-terminal region of this family of bacterial phosphatidylglycerol lysyltransferases. The function of the family is to add lysyl groups to membrane lipids, and this region is the transmembrane domain of 7xTMs. In order to counteract attack by membrane-damaging external cationic antimicrobial molecules - from host immune systems, bacteriocins, defencins, etc - bacteria modify their anionic membrane phosphatidylglycerol with positively-charged L-lysine; this results in repulsion of the foreign cationic peptides.	1.32806e-15
NZ_CP006003.1\|WP_046710985.1\|1127718_1128705_-\|alcohol-dehydrogenase	gnl\|CDD\|176645	cd05282, ETR_like, 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain.	2.27931e-141
NZ_CP006003.1\|WP_046710978.1\|1115113_1116304_+\|elongation-factor-Tu	gnl\|CDD\|183708	PRK12735, PRK12735, elongation factor Tu; Reviewed.	1.95164e-149
NZ_CP006003.1\|WP_082164958.1\|1113824_1114715_-\|urease-accessory-protein-UreD	gnl\|CDD\|376611	pfam01774, UreD, UreD urease accessory protein. UreD is a urease accessory protein. Urease pfam00449 hydrolyzes urea into ammonia and carbamic acid. UreD is involved in activation of the urease enzyme via the UreD-UreF-UreG-urease complex and is required for urease nickel metallocenter assembly. See also UreF pfam01730, UreG pfam01495.	8.85788e-58
NZ_CP006003.1\|WP_046710981.1\|1119320_1119980_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	3.96088e-12
NZ_CP006003.1\|WP_052770759.1\|1120431_1121124_-\|hypothetical-protein	gnl\|CDD\|379195	pfam13453, zf-TFIIB, Transcription factor zinc-finger.	1.5809e-08
NZ_CP006003.1\|WP_046710979.1\|1116733_1117927_+\|elongation-factor-Tu	gnl\|CDD\|234596	PRK00049, PRK00049, elongation factor Tu; Reviewed.	1.12776e-162
NZ_CP006003.1\|WP_046710991.1\|1136126_1138748_+\|ligand-gated-channel-protein	gnl\|CDD\|238657	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.	2.03557e-34
NZ_CP006003.1\|WP_046710983.1\|1122802_1124233_+\|hypothetical-protein	gnl\|CDD\|275327	TIGR04534, hypothetical_protein, ELWxxDGT repeat. This model describes protein repeat with a well-conserved motif ELWxxDGT, and a periodicity of about 48. A single protein may have as many as 18 repeats. It may consist nearly entirely of this repeat, or may have other repeats as well (e.g. hyalin repeat). It is most common in the Deltaproteobacteria.	2.13326e-20
NZ_CP006003.1\|WP_046710988.1\|1133277_1134273_+\|ketoacyl-ACP-synthase-III	gnl\|CDD\|238426	cd00830, KAS_III, Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.	1.3092e-75
NZ_CP006003.1\|WP_046710986.1\|1129931_1132148_-\|dehydrogenase	gnl\|CDD\|239163	cd02762, MopB_1, The MopB_1 CD includes a group of related uncharacterized bacterial molybdopterin-binding oxidoreductase-like domains with a putative N-terminal iron-sulfur [4Fe-4S] cluster binding site and molybdopterin cofactor binding site. These members belong to the molybdopterin_binding (MopB) superfamily of proteins.	0
NZ_CP006003.1\|WP_046710990.1\|1135278_1136082_+\|chemotaxis-protein-MotB	gnl\|CDD\|181619	PRK09039, PRK09039, peptidoglycan -binding protein.	4.45469e-42
NZ_CP006003.1\|WP_046710989.1\|1134598_1135150_+\|lipoprotein	gnl\|CDD\|374318	pfam16036, Chalcone_3, Chalcone isomerase-like. Chalcone_3 is a family of largely bacterial members.	1.85124e-25
NZ_CP006003.1\|WP_046710984.1\|1126915_1127689_-\|3-oxoacyl-ACP-reductase	gnl\|CDD\|187600	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs. This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs.	2.93601e-98
NZ_CP006003.1\|WP_052770760.1\|1121181_1122603_-\|hypothetical-protein	gnl\|CDD\|199882	cd02851, E_set_GO_C, C-terminal Early set domain associated with the catalytic domain of galactose oxidase. E or "early" set domains are associated with the catalytic domain of galactose oxidase at the C-terminal end. Galactose oxidase is an extracellular monomeric enzyme which catalyzes the stereospecific oxidation of a broad range of primary alcohol substrates and possesses a unique mononuclear copper site essential for catalyzing a two-electron transfer reaction during the oxidation of primary alcohols to corresponding aldehydes. The second redox active center necessary for the reaction was found to be situated at a tyrosine residue. The C-terminal domain of galactose oxidase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase, among others.	1.35193e-35

>NZ_CP006003.1|WP_046710983.1|1122802_1124233_+|hypothetical-protein
MRCRCLLWVVLLVGCAPAAGAPEPVEEEAAAALLESWEYCSRTAVSLGVTLVEDTPYTSPMAPSTGGMVFSAEDDARGREPWVSSGAPGAGTRLLKDVFPGVGGSEPNWFTRVGAKVFFAANDPVAGRELFVSDGTPEGTVRVKDIWPGEVGSFPNALFEYQGLLYFTAGDPAHGRELWRSDGTAAGTVLVEDLVPGVEDSSPDQLTRGGDGALYFVVSVRGLITRLMRLGVGPTAVEVMSVPSELGFQFPLMPVGRKLFFVRSLEHHGAVGLMMTEAGAPPVTLGTFARVGELAAVGARLVFSAAAHMEEENLELWRSDGTAAGTVLVEDVRAGNVGSNPQNFAVLADTLFFAADDGTHGVELWDSDGTAARTRIFGDLELGLGGSFPQALTVVEDHLFFSADVRGRGQEPWVSNGFRVGTVPLTELAPGPRGSSPRSFRRSGWSVFFSAEDATGVRRLFALPFRPDGRCLVPEQ
>NZ_CP006003.1|WP_052770760.1|1121181_1122603_-|hypothetical-protein
MRHPPLPRRCALLAVHLLGLVLLGATSARAQVPSLTGRWSSVLTWPISATHLALMPDGKVLFYGEFEEGALPPRRWDPSTGALTTYPYVGYNIFCSGHNFLSNGKLLVTGGHIASHVGLPDTSAFDFNTNTWTRLPDMNAGRWYPTNTTLSNGDVVVISGEIAGAGDINEIPQRFIAGTNSWRTLTGARRNLPFYPKMFLAPNGQLFYAGSLRGSLWLNPNGNGAWTTGPLSNFGGRSYGPAVLIDGKVTLFGGGEPPTATVEQIDLTVAAPSWRYVAPMSIRRRQHNAVLLPDGTVLIIGGSSGSGFDDAASPVLYAELYNPATNTWTSLASQVRYRGYHSTAALLPDGRVLSAGGANEHTAEVFSPPYLFKGARPVITAAPTTSQPGATFSITTPDAARITRVSLIALNSTTHTFDMNQRLLTLAFTRTAGALTVTAPPNRNLAPPGYYQLFIVNDAGVPSYGRRLRIPPP
>NZ_CP006003.1|WP_052770759.1|1120431_1121124_-|hypothetical-protein
MERSCPVCPPPAPPLRVIDLRGVPVDTCARCQGHWLDAGELERLAPGWRTEALQAALPSATRRCRHARHHVPATREECGLCGSAAARCPSCDETLSQVRTEVCAVDVCSRCHGLWLDANELKQLMDWHRRWRRPLVVGLTAAGTTAAAAVALSQVAADTPTRTRVTEVLQSTVEQAAESVDVVELAVGAVDLAGGAAEGVGLAVEAAVEGGEVVSATVGGLLAVVAGLFQ
>NZ_CP006003.1|WP_046710982.1|1119990_1120350_-|PilZ-domain-containing-protein
MMNPASQKSSLADDRRSFPRLQAPLYARPARLKFGDKQRVLDASLGGVRIYSDDAYTEGSNLEVDLFLGDGTTLECRARVAWLRKLPKDAAAVYEVGLAFMDVTPEALERLKSVLVAED
>NZ_CP006003.1|WP_046710981.1|1119320_1119980_+|TetR/AcrR-family-transcriptional-regulator
MSPRRASKAPGTLPSAKPREGTAVHAKGHERVERILDAAMDVLVEEGYAGLALRGVAQRAGLSLGNLQYYFPTKQDVVRALLSRYLEAAIRHVRERMDGAGTHPDQRLRHALDAILEDQESPRHFQLFAELWALAARDTMVAEALGVFYAGYREGLVELLTPLTPGLTPARRERRAALLMAFFEGLSLFRGGGSLRSVAVPGLEQELRALWADWTNPPE
>NZ_CP006003.1|WP_046710980.1|1118214_1119324_+|hypothetical-protein
MESEGSVVLVGGYGVVGVRLARLLRERHPKLPLVIAGRRLEQAAGLASQLGHAHGVAMDIRAKDPLAVLKGRPAAVVTLVNDPEDHLLVSAARAGVPLLDITRWTSRMRSAMLRLSGMPPRAPVLLGSAWMAGLVPRLVAVAASRVGALSQVDVGIRFALADVAGPDSLEYMDRLALSFEVKEDGQERHVLPLTDGRKVTFSDGKSTRVFRLDTPEQATLPAVLGARGVATRMGFDADSATWSLVVLQRLGVLKLLQHPRLTRLRRALLATSNKGGDAAWVADVVGEHGRVRVEVVDPKGQAHLTAVGALLGVERLLGVDGAPPHAPGVWFPEHEPRAEHSLAALRACGVQVRIDEALIAAPAPLKVAA
>NZ_CP006003.1|WP_046710979.1|1116733_1117927_+|elongation-factor-Tu
MDAQAKITDSKPNVNIGMLGHEGHGKTLLTAAITQVLAKRGGAERCSYEALQAVGQRIERGIFLSTTQVEYQTVNRRYAHVDHPGHADCVKNLMTGAASLDGAILVVSAVDGPMPQTREYALLAHQSGVERLVVFLNKTDLMSNRELHELWEEEIRELLTECGFRGDEVPIIRGSARRAFEGDAGEWGERAILSLLEAVDHEIPTPWRAGDEPLLLSVEDVYLRLDGGAVVVGRVERGRLHPEEEVEVVGVRPTRRAVVTRLEKSLQAVPEAGRGDTLDVHLGGLGGWLPERGQVLATPGSLKPYTRFKAQVYLLAREDGGRRGLLLSGDRLGFNFHGVDVIGKMWLPRGERFGTPGDNLPLEIQLETPVALEKGLRFSVRETGCTVGVGIVTDVLR
>NZ_CP006003.1|WP_046710978.1|1115113_1116304_+|elongation-factor-Tu
MSAQVEVEQPKPRVHLGVLGHEGHGKSTLAAAITKVLARSSETRTLSPTGSGTLRQTRSRGISLSMMYVECQTSHRCYSHVVPPSHVDCVKGLMTGSAPMDGAILVVSADEGPMPQTRDCIRLAREAGIRSIVVFLNKWRLMDDPEIRELVEHEVRTLLKSYDFPGDETPIVTGSALRALGGDTGAWGEPAIRRLLEVVDRHITTPRCVTREPLLMPVQGVRFIINQGTVVGGRVERGTLHLHEEVEVVGLGPTLRTVVTRIEQFHKPLDEGRVGDKVDVQVRGLEGWTLKRGQVLARPGSIRAHQRFIARVYLLTRADGGRHGVLLDDDCLRFCFHGTDMMGTVRLLEGERLGNPGDTLLLLVELTDPVALEETLRFEVREGGRTVGVGIVTKVL
>NZ_CP006003.1|WP_082164958.1|1113824_1114715_-|urease-accessory-protein-UreD
MLAEVASFPPAPTGPGSAHVSQALPETPRRAGFARLAFERAGGRTVVSTALSHSPLRLLTPRNHGHAAWAYTSSFGGGLVDGDSLHLDLDVAPGATAWLSSQGANRVYRSPSGCTSDVSARVGDDALLAWVPDPTACFTGARYSQTLAFQLAPSASLIVADIVTSGRSASGERWAFSHYASTLRVHVGERALVDERWLLDPTHGPLRERLGRFEAMATLLLVGPGLATAREALLARVTALPVTPRADLVPSASPLGPHGLLLRAAAVSVESLVRTTRDWLSFLPALLGDDPWARRV
>NZ_CP006003.1|WP_046710977.1|1112968_1113739_-|urease-subunit-beta
MHLSPRDVDKLLLHQAGFLAQKRLARGVRLSYPEAVALIATQLLELIRDGRSVAELMDLGRKLLGRSQVMQGVPEMLAEVQVEGTFPDGSKLVTVHYPIVAEHGDLELALYGSFLPVPPRERFTASTAADDGIPGEVRVLPGEVELNAGRDSVLLRVTHRGDRPIQVGSHYPFFETNRALVFDREKAYGHRLDIPAGTAVRFEPGETKTVSLVAIAGEQVVRGGNALGSGKVSAENRERAMAQVREQGFGHEEERE
>NZ_CP006003.1|WP_046710984.1|1126915_1127689_-|3-oxoacyl-ACP-reductase
MKRVEGKVALITGAAGGLGSAAARMLAREGARVVVTDRPQQEEAGVEVARSLGEGMGLFVPLDVTREEDWVRAMEVTLAKFGRLDVLVNNAGLGVPKDVENITLAEWRLVHAVNLDGTFLGCKHGIQAMRKSGARGSIINISSVAGLIGVPTLVAYGSAKAAVHMFTKSVALHCAHHGYGIRCNSIHPTFIETNMVKALIASSSSPERAREGLRRTIPQGAMGEPDDVANAVVYLASDESKLMTGAEMILDGGSTAQ
>NZ_CP006003.1|WP_046710985.1|1127718_1128705_-|alcohol-dehydrogenase
MKAVRFSKFGHPLKVVELVEEPDAALESGQVRIEVLATPINPSDVLTLSGQYGSLPKLPAVPGNEGVGRVVEVKDTSAVKVGDLVFLPLGAGTWRTHLVAPAEGLVTVPPGTDLKQASMLFVNPPTADILLREFGALKPGDWVLQNAANSAVGRYLITLAKQAGYKTLNVVRREELANELTELGADVVLTDTDDLPERVKAATGGAKVRLAIDAVGGDSTRRLGDSLATGGTVVNYGVMSGKGPKLSAAATIFKDVTLRGFWLVLWLKRAPREQQQEMFGRLAKLVADGTLKTAVEGTFTLDAIQEALARSMEGGRGGKVLLTPNGPV
>NZ_CP006003.1|WP_046717412.1|1128985_1129999_+|lysylphosphatidylglycerol-synthetase-family-protein
MEAARVAAPRAVPFKRRVTGLLRPLFAVAGVGMLALLVRKVGPHELGAVLLGAAPWLPWVVLLEVGRQGMDALATRASYGASAERVPLRVLARAQLIGTAVSSMAPAGRAAAEATKAALLSPHMGGGTAAAAAATSQAASLAAGGLISFPCAAASFLLTGWSVFTLAMLGHGVVLVLASTGVRACMRAQGPCAWLAKRSRKWAQLTEQFRETACHGPLLPKSPVLAFLGSRTLQVAQYAVLTHAVGIDTSVVQALFSQGLYLCALAVGSLVPGQVGVSDGAFALAAGVLDTTAARAMSVALLGHLVQLVFVLAGALTPLVWRMPGVARPASPSPACR
>NZ_CP006003.1|WP_046710986.1|1129931_1132148_-|dehydrogenase
MSAKATSRVHFRTCNLCEAMCGLRIELQEERITSIRGDDEDPFSRGHVCPKALALKDLHEDPDRLRHPMRRTQTGWERVSWDEALDAAAKGLHAVQQAHGRDAVASYLGNPNVHNLGNMVFGSELVRALRSKNRFSATSVDQLPHQLVSYFMFGHQLLVPIPDLDRTRYLLVMGANPLASNGSLMTAPDVRTRLRAIQQRGGRLVVVDPRRTETAAIADTHVFIRPGTDALLLLALLHVVLHEHPPRTGHLDALTDGLDTVRALARDFPPERVAPHTGVPAETVRTLARDFLAADAAVCYGRMGLSTQPFGSLCQWLINVLNAVTGQLDKEGGAMFTQPAFDIICGPKAMALGRGSHGRWKSRVRGLPETGGELPSAVLAEEMLTPGDGRVRALVTMAGNPVLSTPNGAQLERALEGLDFMVSVDPYLNETTRHANIILPPVSPLERGHYDVAFHALAVRNTAKYSPPLFEPGPEGRHDWQIVLALQHRLETLRKGRPSVRQTLRYQALTRLGPERMLDVGLRMGPHGNRFHPLRQGLSLSKLRASPHGVDLGPLKPCLPERLQTKDRRLHLAPALLVADVQRLAQTFPEGAAPDARAGELLLIGRRHLRDNNSWMHNVPGLLKGKPRCTLMVHPEDASRLGLADGVDATVTSRVGEVTVPVAVTDEVMPGVVSLPHGYGHRRQGTKLRVASEHAGISQNDLTDDHAVDAVSGNAAFNGTPVRVRPAAPPQASATPAA
>NZ_CP006003.1|WP_046710987.1|1132233_1133136_+|hypothetical-protein
MEPWVIAVGLLALSPLDVGATEPPRIVVSKARALSFTRQDAVVGRAEEVRMGMTMQQDFSITAPFMEPEPIDVSTEMFQAQVFTPLEVKGPLVTKAKLAYGDVVDVMKDPQGRQKRQVTVVHQKTYVGEAKAGRVEVTDANGQPVPPEEAELVRKDLDGLGVEDPIAAAFPQGPVKVGAKLDGVARAFEKLLQKGNPASVKFRKTRVQLQEIHEDPRGLVGLFLVSTTMEMAPDEQNPMTTTIAYQGTMHVLGEGTELTAFNLQGPVVYTPIPAMKAKGMQVKGKGDSVLFFSVQPVKKH
>NZ_CP006003.1|WP_046710988.1|1133277_1134273_+|ketoacyl-ACP-synthase-III
MFLHALGHFHPPNLLTNAFLEELGLETSDAWILERVGIRSRHTVLPLDYLRQTRNRDVRAAQEAALFSNAQTGAHAARVALARAGLKPSDIGLVVAGGCSPDECIPAESNRVAQELGIDAPAVDLQSACSSFCTQLHFLTGMRPERLPEYVLVVNMDNSTRVVDYTDRSSAVLWGDGSSAAVLSARVPGRWRITETRLAGDPSGADKVRVPRIGHFTQHGAEVQKFAIRRAGETFLELRADYLARHPDRGAGDVTFIGHQANLRMLEAVQRRCEVPESRHFFNVHVRGNTGAAGAPGVLSEHWDDPGLGDALVLSVVGSGLTWAGALLERT
>NZ_CP006003.1|WP_046710989.1|1134598_1135150_+|lipoprotein
MREQAWKSARWLVLGLVLATGAAEAGQKQVGGVHMPDSLQLQGRTVELAHMELHKRFLFKVYVWSLYLESRPRSASEAIASNSVKRLHFRFLRDITRSQLVDSLRNGLYRNPELREGPLSQQLGVMLASLRDVEKGGDLIITYTPDGGLEVGGAASGGVFIPGKTFADALFAVWLDVHPIFPR
>NZ_CP006003.1|WP_046710990.1|1135278_1136082_+|chemotaxis-protein-MotB
MRTRLILAALVALSTTGCVSQGKFDAKALEAENLTKGLNDEKGAREAAEAKVKELTEKIAALEEEKKALETRLTTSESRLTANAAERRALQDQNAQLAALNEELARNSKKLAQAKEELEKKSSEYESLAQSLKSEISEGKIELSELKGRMTVQLKDKILFASGSARVGKEGGEALKKIADALKTVQGKIIRVEGHTDDVPTGGGQFPTNWELSLARAMAVVRALQDAGVDPTTLSAAGYGQYQPIAVNDSPENRSLNRRIEIVLAPK
>NZ_CP006003.1|WP_046710991.1|1136126_1138748_+|ligand-gated-channel-protein
MRTFLAVLCFCLAAGAWAQQVPDGGVADPDAGVPTGVLTKPPELLRQVEAPYPPEAAAQQLEGTVVMFIDISETGAVTNVEITQPAGHGFDEAAVEAVKQFEFSPAEVDNVPSPVRIQYAYQFVFRPVAPPTDADGGTVEPEAPVNFSGQALERGTRKPLNGAEVVLPELDRSTVADSEGRFSFRGVPLGTHEVLVVQGGYDRFKTRETVSEGRETRATYYVQKRIFSPFETVVRSDRERKEVTSTTLQVAEVQRVPGTQGDTLKVVQNLPGVARPAFNGGALVIRGTSPQESGVFLDGQRIPLLFHFGGLTSVYNSELLESLDYLPGNFSSYYGDITGGVINVNSREPKMDRIHGTVGVSLIESNAVIEGPITDTLGFAIGGRRSYIDIVLGVIPEGDDGPSLQVAPRYYDAQLKLVWKPISRHTFTLQGITSRDRLGLVFDRPSDNDPSVNGNLDVTTGFNQLRLRHQYRGERLTLDTHALVGNTLVEFEIGERNLRIASTDLNLRATAEYALVEPFTLAGGVDVTSSFANVKARIQRPPREGEPPSPLITEDLLDTDGDFLQYFPSLWIEGRWRPFKGLLVVPGVRYEGYVFTDQKKVKRTLNPRLAVRYALTDTLTLKGGAGVYHGPPVQDEPSLAFGNPDLSAKRSLQYGVGAEWQPVQEWFVSGEVFYNDLDNLISRSDALVERDGELVPERLKNGGIGRVYGFELLVRRALTERLFGWIAYTLSKSERRDAPGANWRLFDNDQTHVLTAIASYKLPKGWEVGARFRFASGNPTTPVVGSVRDDGTDVFLPLFAGVNSRRLPSFNQLDVRVDKIFVFDKWTLDLYLDLTNVYNNAAVEGIAYNYNYTQSAYFEGLPILPVIGAKGSF
>NZ_CP006003.1|WP_046710992.1|1138750_1139620_+|hypothetical-protein
MRACVFISLAAALLACGPDFELQSEIRRVRVLGIRAEPPELVLDPDTGALPGPTSFTALAVAPDARPVTVTYALCRLNGNPYDGRCPGENGVPLADGTLSLQDPDVQAVLLQAIQAANPNGGATPNPDDPRTRAALEKGIPLFVGYEATDGSGTPEGTERGVRQVLVRMTREPNHNPAVADILWNDAPLVGPLPLDQEVVFRPTLTEGSLEVFTGEDGAETEQVFYSWFVTGDGEVKEFRSLEPVDGRPGDPTSKYETPKAPQRLTVYVVARDGRGGVGWLSREVDAGP

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Crispr_ID: NZ_CP006003_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP006003_7

1588723-1588805

Orphan

Consensus_repeat	Method
GCCATCACCGGCAGGCCCGAGGACACCGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP006003_7

>merge|NZ_CP006003|7|1588723-1588805|CRISPRCasFinder
GCCATCACCGGCAGGCCCGAGGACACCGGCGCGGGGGCCGGCGTCTCCAGGGCCGCCATCACCGGCAGGCCCGAGGACACCGG

>NZ_CP006003|7|7|1588723-1588805|CRISPRCasFinder
GCCATCACCGGCAGGCCCGAGGACACCGG	CGCGGGGGCCGGCGTCTCCAGGGCC
GCCATCACCGGCAGGCCCGAGGACACCGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP006003.1\|WP_046717480.1\|1590935_1592267_+\|adenylate/guanylate-cyclase-domain-containing-protein	unknown	unknown	gnl\|CDD\|143636
NZ_CP006003.1\|WP_046711271.1\|1580232_1581609_+\|wax-ester/triacylglycerol-synthase-family-O-acyltransferase	unknown	unknown	gnl\|CDD\|274360
NZ_CP006003.1\|WP_046711279.1\|1593446_1594496_-\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|378890
NZ_CP006003.1\|WP_046717478.1\|1581609_1582977_-\|sigma-54-dependent-Fis-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225114
NZ_CP006003.1\|WP_046711276.1\|1589965_1590700_-\|16S-rRNA-(uracil(1498)-N(3))-methyltransferase	unknown	unknown	gnl\|CDD\|236959
NZ_CP006003.1\|WP_046711267.1\|1573888_1574356_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046711275.1\|1589588_1589855_-\|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	unknown	unknown	gnl\|CDD\|225170
NZ_CP006003.1\|WP_082164981.1\|1599208_1606495_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274730
NZ_CP006003.1\|WP_046711282.1\|1596518_1597385_-\|50S-ribosomal-protein-L11-methyltransferase	unknown	unknown	gnl\|CDD\|234786
NZ_CP006003.1\|WP_046711277.1\|1592295_1592811_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226914
NZ_CP006003.1\|WP_082164980.1\|1584851_1588133_-\|FrgA-protein	unknown	unknown	gnl\|CDD\|223021
NZ_CP006003.1\|WP_046711278.1\|1592829_1593318_-\|DUF962-domain-containing-protein	unknown	unknown	gnl\|CDD\|226914
NZ_CP006003.1\|WP_082164979.1\|1577387_1578080_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|99734
NZ_CP006003.1\|WP_046711266.1\|1572208_1573597_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046711272.1\|1582997_1584539_-\|two-component-sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|236901
NZ_CP006003.1\|WP_046711270.1\|1579348_1580137_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046711269.1\|1578261_1579260_+\|SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|100107
NZ_CP006003.1\|WP_046711281.1\|1595182_1596316_+\|metal-dependent-hydrolase	unknown	unknown	gnl\|CDD\|377294
NZ_CP006003.1\|WP_046711280.1\|1594552_1595059_-\|DUF1993-domain-containing-protein	unknown	unknown	gnl\|CDD\|370447
NZ_CP006003.1\|WP_082164978.1\|1571292_1572117_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238058

Protein	Function_ID	Function_description	E-value
NZ_CP006003.1\|WP_046711269.1\|1578261_1579260_+\|SAM-dependent-methyltransferase	gnl\|CDD\|100107	cd02440, AdoMet_MTases, S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). There are at least five structurally distinct families of AdoMet-MTases, class I being the largest and most diverse. Within this class enzymes can be classified by different substrate specificities (small molecules, lipids, nucleic acids, etc.) and different target atoms for methylation (nitrogen, oxygen, carbon, sulfur, etc.).	6.21161e-08
NZ_CP006003.1\|WP_046711271.1\|1580232_1581609_+\|wax-ester/triacylglycerol-synthase-family-O-acyltransferase	gnl\|CDD\|274360	TIGR02946, Putative_diacyglycerol_O-acyltransferase_Mb3115, acyltransferase, WS/DGAT/MGAT. This bacteria-specific protein family includes a characterized, homodimeric, broad specificity acyltransferase from Acinetobacter sp. strain ADP1, active as wax ester synthase, as acyl coenzyme A:diacylglycerol acyltransferase, and as acyl-CoA:monoacylglycerol acyltransferase. [Unknown function, Enzymes of unknown specificity].	4.41199e-137
NZ_CP006003.1\|WP_046711279.1\|1593446_1594496_-\|AraC-family-transcriptional-regulator	gnl\|CDD\|378890	pfam12625, Arabinose_bd, Arabinose-binding domain of AraC transcription regulator, N-term. AraC is a bacterial transcriptional regulatory protein with a DNA-binding domain at the C-terminus, HTH_AraC, pfam00165, and this dimerization domain which harbours the arabinose-binding pocket at the N-terminus. AraC positively and negatively regulates expression of the proteins required for the uptake and catabolism of the sugar L-arabinose 1,2,3].	4.75563e-38
NZ_CP006003.1\|WP_046717478.1\|1581609_1582977_-\|sigma-54-dependent-Fis-family-transcriptional-regulator	gnl\|CDD\|225114	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms].	0
NZ_CP006003.1\|WP_046711276.1\|1589965_1590700_-\|16S-rRNA-(uracil(1498)-N(3))-methyltransferase	gnl\|CDD\|236959	PRK11713, PRK11713, 16S ribosomal RNA methyltransferase RsmE; Provisional.	1.18401e-74
NZ_CP006003.1\|WP_046711275.1\|1589588_1589855_-\|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	gnl\|CDD\|225170	COG2261, COG2261, Predicted membrane protein [Function unknown].	1.23332e-10
NZ_CP006003.1\|WP_082164981.1\|1599208_1606495_-\|hypothetical-protein	gnl\|CDD\|274730	TIGR03696, tRNA_nuclease_WapA, RHS repeat-associated core domain. This model represents a conserved unique core sequence shared by large numbers of proteins. It is occasional in the Archaea Methanosarcina barkeri) but common in bacteria and eukaryotes. Most fall into two large classes. One class consists of long proteins in which two classes of repeats are abundant: an FG-GAP repeat (pfam01839) class, and an RHS repeat (pfam05593) or YD repeat (TIGR01643). This class includes secreted bacterial insecticidal toxins and intercellular signalling proteins such as the teneurins in animals. The other class consists of uncharacterized proteins shorter than 400 amino acids, where this core domain of about 75 amino acids tends to occur in the N-terminal half. Over twenty such proteins are found in Pseudomonas putida alone; little sequence similarity or repeat structure is found among these proteins outside the region modeled by this domain.	4.3585e-21
NZ_CP006003.1\|WP_046711282.1\|1596518_1597385_-\|50S-ribosomal-protein-L11-methyltransferase	gnl\|CDD\|234786	PRK00517, prmA, 50S ribosomal protein L11 methyltransferase.	2.25124e-81
NZ_CP006003.1\|WP_046711277.1\|1592295_1592811_-\|hypothetical-protein	gnl\|CDD\|226914	COG4539, COG4539, Predicted membrane protein [Function unknown].	2.00391e-05
NZ_CP006003.1\|WP_082164980.1\|1584851_1588133_-\|FrgA-protein	gnl\|CDD\|223021	PHA03247, PHA03247, large tegument protein UL36; Provisional.	2.82507e-20
NZ_CP006003.1\|WP_082164979.1\|1577387_1578080_+\|hypothetical-protein	gnl\|CDD\|99734	cd00609, AAT_like, Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. The major groups in this CD corresponds to Aspartate aminotransferase a, b and c, Tyrosine, Alanine, Aromatic-amino-acid, Glutamine phenylpyruvate, 1-Aminocyclopropane-1-carboxylate synthase, Histidinol-phosphate, gene products of malY and cobC, Valine-pyruvate aminotransferase and Rhizopine catabolism regulatory protein.	1.4567e-12
NZ_CP006003.1\|WP_046711272.1\|1582997_1584539_-\|two-component-sensor-histidine-kinase	gnl\|CDD\|236901	PRK11360, PRK11360, two-component system sensor histidine kinase AtoS.	9.85488e-53
NZ_CP006003.1\|WP_046711278.1\|1592829_1593318_-\|DUF962-domain-containing-protein	gnl\|CDD\|226914	COG4539, COG4539, Predicted membrane protein [Function unknown].	2.41659e-13
NZ_CP006003.1\|WP_046717480.1\|1590935_1592267_+\|adenylate/guanylate-cyclase-domain-containing-protein	gnl\|CDD\|143636	cd07302, CHD, cyclase homology domain. Catalytic domains of the mononucleotidyl cyclases (MNC's), also called cyclase homology domains (CHDs), are part of the class III nucleotidyl cyclases. This class includes eukaryotic and prokaryotic adenylate cyclases (AC's) and guanylate cyclases (GC's). They seem to share a common catalytic mechanism in their requirement for two magnesium ions to bind the polyphosphate moiety of the nucleotide.	3.14911e-63
NZ_CP006003.1\|WP_046711281.1\|1595182_1596316_+\|metal-dependent-hydrolase	gnl\|CDD\|377294	pfam04307, YdjM, LexA-binding, inner membrane-associated putative hydrolase. YdjM is a family of putative LexA-binding proteins. Members are predicted to be membrane-bound metal-dependent hydrolases that may be acting as phospholipases. It is a member of the SOS network, that rescues cells from UV and other DNA-damage. Expression of YdjM is regulated by LexA.	2.07612e-23
NZ_CP006003.1\|WP_046711280.1\|1594552_1595059_-\|DUF1993-domain-containing-protein	gnl\|CDD\|370447	pfam09351, DUF1993, Domain of unknown function (DUF1993). This family of proteins are functionally uncharacterized.	2.12249e-83
NZ_CP006003.1\|WP_082164978.1\|1571292_1572117_-\|hypothetical-protein	gnl\|CDD\|238058	cd00110, LamG, Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of purposes including signal transduction via cell-surface steroid receptors, adhesion, migration and differentiation through mediation of cell adhesion molecules.	2.77413e-08

>NZ_CP006003.1|WP_082164980.1|1584851_1588133_-|FrgA-protein
MPARLAQLLVSRTLLSQEKAGELLRLQQAQGGHLDTLLLEQGLANEADVLSLLGDVAGFRPVNLVDFEPNLEVASFIPPKIAERLCAVPLSLDGQTLHVACAYPVPKKELDEVGFLLGKPLELWVATEVRIREWISTIYRQPLAPRFTQLVSALDPDKQLPVTPPPPPPSDESLTVDMVERLARSVAGEPVAAEIRAAPREAPASQRPPPPPPPDPVPPPAFVRAPLRLNMPAAERPATPPSRPDTSRPAQPPVLTATPPRPPVEAAPTTVHRGGVPSASGAPSEAQAPARAGGASPTGVPARPATAGAQSPAGSSTGTQSATSGASPTGFAGQPPAHPATSGTSTGVSAAYPATTSGASTGASVAQPTTTGTASAGFAGQPPAHPSTSGAASGRPATGSGAQPAAYPTTTSSGVPSATSSGRLATGPSAQPPATAQGGASSGARPSTAPGAQPSSQPMTGARPSTAPASGAPSSATPPGAAPPLWPPAPSGGAPQLWPPGPAAPTSGTDSAPLSTMRFGSPLLAGGPRPEVPPAQPPRSSEPAFIVFPNPNKPAAQPKAKAPESEVRPPPTASANQEIPDWTLAAARAALRESTKDRDKLMDVALRFGRRTFDYVAAFAVLRGAAIGWEARGDGMASEGLTQVSVPLDASSVFRTVAVTRGSYAGPLPPDALTRHYLELFGRQTPRTVFLYPVEVKGRLVAILYGDCGQKPMSQRRLSDYILFCQDLASAFQELILFRKQRVSEPRSIEEDITIDVDVPVAATPAPAPAVVAGLGWSPFFGRGAAGTVGRAAALPPRAQSQEERPPPDFAPLLRRLTGPDAAQRSNAMVELARSPEASARVLAQHFPGPTAWSRLPVVELPEADELGPIPAALSRLGRPAAQALAPLLDSPDADTRYFALLTAGNLPYVELVDGVLRGLFDLEPDISSAARVAAAALKQLPRLDSAMRELRQELNSRDTMRRALAARALGTLHDREAVEGLIQLTRSEDEMCAQAAAEALREVTRMPLGLSPKQWAAWWAENRSRRRADWLIAALRHRELDVRLAAIEELSRALNDTLGYYADAPENEREAAARRWESAAVDPANARRLGML
>NZ_CP006003.1|WP_046711272.1|1582997_1584539_-|two-component-sensor-histidine-kinase
MTGGMWISLIACAGQLALAGLALARVGRSPLALPLSLLSIALSAWNFTGYALAGAGETGWRLVGFAAALMTVPCTLHFTLAFVGRRRRSAWAMYGTYAVFGALALLMHVALGVPSLAATILTLRFGIFVTVLVVPPVIGTFTLLALHLRDARRPDERARASLMALGLTFLVALLLTELAVELGLRQVPRLGNLGTLLCMPLMATASLRFGLFGRDESEGAPRMALHAVVLAGVGVLAYLAVFRLFAAQVGALVLCTTAITFSLVAATRRGVTAFVTRGERMERLATLGRFSAQMAHDLKNPIAALKGAAQYLKEEHARGQSWDTHGEFLDLMLEQVERLGRVVDTYQRLARVEPLPRPVDLGRLVEGVLSLQAFASTSPITIVRELAPDLPACAADEDLLTNAVENLVRNAAEAMPKGGTLTVRTLKDGAAVAVEVEDTGEGMDVRTRERAFDDFFTTKASGSGMGLAFVRRVVEAHGGTVGLTSREGRGTVVRLRLPVEARRVDGGAEGEAA
>NZ_CP006003.1|WP_046717478.1|1581609_1582977_-|sigma-54-dependent-Fis-family-transcriptional-regulator
MLLVDDDPAVAKVLGALLNQAGLATHTARNGTEALALLERWPVDVVVSDVRMPGMDGMQLLAEMGRAWPDVPVILITAHGTVPLAVEAMKAGAADFVLKPFDREEILFTIRKALLRAQGEATNEPLRTPSAFVGGSQRMTEAQALLAKAATGMATVLLRGESGTGKELAAKAVHDGSPRHAGPFVKLHCAALPDTLLESELFGYEKGAFTGAATRKPGRVELAHGGTLFLDEIGDISLAVQVKLLRVIQERELERLGGTQTVKVDVRFVAATHQPLEDLVKAGRFREDLFYRLNVVPLWLPSLRERPEDIEPLARHFLDIHARTNGKPPFTLTPDGLAVLRAQPWPGNVRQLQNFLERLVVLSDGQTLTGDDVSRELARQPGLTTPVLTPPQGVTALASPAAESGRTLESQRKGTEKQALVDALARAGDNRTLAARLLGISRRTLYNKLEEHALL
>NZ_CP006003.1|WP_046711271.1|1580232_1581609_+|wax-ester/triacylglycerol-synthase-family-O-acyltransferase
MNQERMASVDALWFHMEEPANLMMITAVLGFEGRLDFERLRELVRTRLVECYPRFRQKVVMGRLGQPQWEEAQDFSLDAHLQRLQVPAPGDRAALESLVSEWMSTPLERSRPLWQFHVLEGGDGGDVLLARLHHCLSDGIALARVLLTLTDGDGAQAVAPESSRTAPREGGLAKWMRGARAVAGTARTVLRKGAELAAEPILAGDLVRQGALGAAALGKLMVVTPDPRTPLRGPLGTRKRAAWSSPIPLERVKAVGKALGGTVNDVLLAALTGALRRYLEARNVPPEDLHAVVPVNLRPLDEPVPRELGNRFGVVLLRLPVHLAEPRRRLHELSRRMDLVKKSPEAVVTFGALELLGYTPAPLERVVVDVFATKASLVATNVPGPRQPVSLAGVKLRALTFWVPQAGHLGLGVSLFSYAGQVTVGVAADELRVPDPHALIDHFHAELEALSDVVTQVA
>NZ_CP006003.1|WP_046711270.1|1579348_1580137_+|hypothetical-protein
MGSIRGWVVVGGLLSAFAALGQEGGERPRTVAGVCGSANWVCVAECIEPECVDRCLREGCEQSLDRLKACTLKAGCAEDDTQCSAKACGNTCQKAFEPAPPSPEKEQKSPCDGQTASSKPVPQKLVGAWRLAAASLPLQTDGGFTRIEPQPRADYARTLQITPEGCFVLRTALKDATLGQGNQLVVRAWGTMEVLDDHHVKLLAKDGQAVGPVCGDKRVIPLARSKVKFKGGSFRWDFEEETLTLTVDDATKQTFQFEREEE
>NZ_CP006003.1|WP_046711269.1|1578261_1579260_+|SAM-dependent-methyltransferase
MPNLLDLPRQALMDLRSRLSHLPLVSQLPLRNVVPDSLALSSPAPQDSALSDPARVLAWQKACARYVKPGQVVMDVCAGAGLRTFAAATRHPRRLYAVDPSRLLDTTQWVARRNGLEHIDFVRAQPWSFQPPEKVDVLLHELLGEALFDAGLVPRMLDLRSRLLRPGGRILPNRFEVFVEPVQLRDEACLPFIWSQRIPGVDYSCLQTLREAMNPSYFTRVVRSYEVDHLLCEPEPAFAFDLETMTADGLPQRVRYERPVMEAGRVDGFCLFYKVAFDAELSFTVSPLRGQNPAGMTFLRVDPRDFARNELLSFELELADPGDVGTWRWHFR
>NZ_CP006003.1|WP_082164979.1|1577387_1578080_+|hypothetical-protein
MAGAHGGRRAAHAGESAAHRLRAHARGAQHSPRRLEGAVPGVSARTVVLGGLSKEFAAGGLRVGWLATRDRALASAMREAGPGVLHLVTARAAAYLYAAYARSPDGQLLYPARHRSLRAFLTKMRRELAEKRDLLAAVLPSEARAEAGDAGGLFLAPRVTSWLGRTVDGERLTPESLPRIVYEHTHVVLNGGPWSSDPERVRAVFSIPRDKLVKACERLKAFGAKLQSSS
>NZ_CP006003.1|WP_046711267.1|1573888_1574356_-|hypothetical-protein
MKSVTLVDRPRGGEGALMELSFGSPTKVGMQALMSIQPSRNRVVRDPARVRWESQPWRRQLRNPEEFETPVSRSALVKALQDEQLEVDAEVARFAGASEDADCISIAQVVRFAELLTRRMTLADADDQVLQLAHLRRNTEDLAERMIEWANLGRL
>NZ_CP006003.1|WP_046711266.1|1572208_1573597_-|hypothetical-protein
MLSSLVLAATLAAAPAPRSAAQAQTVVHVPKLDALAGLTAFLERAGTHAALLRPAAWRAELHPFLTIDPTRPETLTAVGLDPAGPATVSLRTDGRVSCMRVSDAKVFQAKAAEAMTQAGGEETKSATSKGVTTVSTTRSAGGAMGYALKGSDVCAYGATDEGGAALLKESVKLVGKAPAADARLGKVAGVAFLATGGAVLGLDGNATGLKVDGTTTKLPLPPFQAKAASPYAAMKPEGLLFSRVAVAPAGVSQAVGSLRANIQALCASCPKEQVQSTMDAVAKQLTGNMLVSMSNVQVRGSLRAPEARFFAVKQALAAEVKDAAAMKSALEPLGKLPGAKALEDGWALTVKGGTVQVRQKGKHLVVGNDDAVTQATMAALPETTAKLERAADFSLDPKLLARGLSQVSLADVLSDENLAAMFAVSSELGPLLARSERITGWLDSAPGGAHRFFFDWTLPESK
>NZ_CP006003.1|WP_082164978.1|1571292_1572117_-|hypothetical-protein
MMMRSRVTDFPEPTRILSSLSPHPRQRGDDMPRTTHPRWTAKRAALATLLLAPMAAGAVSQKLRYRFDTVTTPVTTVTDDSGKGHTGTVQTNNGATVTAVTGFEGLGVKFPSVCDGTGCPLANITTPDATDLNPGTALFTFGARVRLTLADLSTAHGSNLVQKGLASTAQWKLQLDDAVQGRPSCVVRTTGGVNPIIVKSSVGVADGVWHKVACQRTSTTLTILVDNVARGSALLPATYDISPTGQAVNVGAKSVGNNNDQYHGEIDDVYFNLD
>NZ_CP006003.1|WP_046711275.1|1589588_1589855_-|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein
MGIIAFIIIGLIAGLIARAILPGKQSMGLLATTLLGMVGSLLGGLVGSLFTRDGRLFDLRPSGLIMSVVGAIVVLLIVGAVGRRRVHA
>NZ_CP006003.1|WP_046711276.1|1589965_1590700_-|16S-rRNA-(uracil(1498)-N(3))-methyltransferase
MVRLFVPIAEPAPDTLVLTGERRHYVVHVLRLGEGDALEVFDGKGRAFEAKVMGVGAEEVRVSLGASRQAPPRRAVSVVQGLPKGDKLEWVLQKGTELGAAAFLPVDTLRSVVKLEPKRAQERTQRWTKIVEEAARQCRRDDVPGVEVPRSLSEAVRALAPGTVVLVLDEEESAVPLGEAFRAAGAGTPIALVVGPEGGLAREEVEALKAQGARPVTLGARILRTETAALAALAVMMHLDGELG
>NZ_CP006003.1|WP_046717480.1|1590935_1592267_+|adenylate/guanylate-cyclase-domain-containing-protein
MGRDDEGFSPGQDSAVARFALSRANEELVLAESSLRGEQRVAWVRLALMALLSVSQGGLAHVTGESLPPHDFQRVLAIVLYALFSVLALVVLLRQRPHLRHARWLPVPTTVADTSFFAFMGWHAWERTGQFDAGMLGASMGMVLVFSVARFSWLHVLLSTALSSMGYAFVAGVSGHGTWSSTSFVVFCYVTLGLLIARTNAEVGRMFLLLRRRDGLSRFLPKQVVERVMASGDTSLRPVQREVTILFSDIRDFTMLSETLQPREVLELLDEYFGRMTHIVMAHGGIVNKFLGDGMLACWGVPDSSEDHAEQAMRAALAMREKLAELNVLRLRRGLPPLRIGIGLHTGVVAAGMLGGAEQHEYTVIGDAVNLASRVEGLTKVHGVDILVSESTWTRGGGDFVGLRLGEAHVRGRREAVVVHALQGHALDAGVESPAPVRIASGT
>NZ_CP006003.1|WP_046711277.1|1592295_1592811_-|hypothetical-protein
MSFADKLRTWMPLHENGPSRAVHFVGAYMFIFALLVPLGLVRFSVGGFSLSAAHVLVALVALYAISLEWTAGLLMSLPLFPTLSAALAVGHLPGATVAIVAVSVMVVRFALVVGAHVVLEKKTHGLSLGGPQLFFIEPVYLITLLLFGMGLKRDLHARVMSGGPRPAPLTV
>NZ_CP006003.1|WP_046711278.1|1592829_1593318_-|DUF962-domain-containing-protein
MLKAPIAALFDEYYSSHQHPINRLTHKVAIPVIVLHIIAMLDWVRLATVPVLPGGVLTLGMVAWALAAVWYLRADVKLGLVVVAFMAACFPLGRLMPTWSVLAIAAFGWLIQLAGHAVWEKKSPSFLTNLVHALVGPLFFVAVLFGDYVIKPQPQGATPARA
>NZ_CP006003.1|WP_046711279.1|1593446_1594496_-|AraC-family-transcriptional-regulator
MEPPASQSLPRPPTEVRSQLVGPLLAYLRATGLDPTPLVQRFGLPLDAGSLPEVSLPLTTLHAFLDAAELLSQDAFLGLHVAQRVPRGNYGLVEYIARASPTLRDTFRALARYMALLEPAWSASFTDDADGGGTFAYGIEGAPLAYGRHASEYGLALFTHVGRQLTERPWSPRAIGFAHPAPPDIAPLVDHFGVAPSFNRGRNTLTLDASTLDLRVLGADPALLCVLERAASAAVPSPAPDAPGFVQAVRDTIRASLREGAPQAADVAKGLHLSLRTLQRRLTEHGTSFQDEVDTVRRELAYQYLRDVNLGVSQVAFLLGYSELSTFDRAFKRWTGMTPRVWREGAERG
>NZ_CP006003.1|WP_046711280.1|1594552_1595059_-|DUF1993-domain-containing-protein
MSLSMYEATIPVFIRSLEVLSTLVTQGEKYAQEKGLDPKQVLEARLASDMFNLVQQVQRASDTSKATAERLSGEPAPRMPDTESTFDELRQRIDKTITYLKSVPAKSFAGSENRTVTLTAGTLKRDFKGDEYLLTFGLPNFYFHITTAYGILRHLGVPIGKKDFIGPL
>NZ_CP006003.1|WP_046711281.1|1595182_1596316_+|metal-dependent-hydrolase
MDNLAHSLVGAWMAEAGLKRYTPLATATLVIGANLPDVDAVVTFAGSDASLYWRRGWTHGVLMLAIWPFVLTGLMLAWDRFLRRRRHPELAPARAGPLLLLSTLSVLSHPALDWLNTYGVRLLMPFDGAWFYGDTLFIVDPWVWLLAGAAVIMADARTRRSAAGWMVLGIASTALVTVPDFVPWPAKVLWVVGVAAIVWLRLKGTQVVSTQRVATVCGVGLVLYLGAILLGSQVAAPRAKAWLEGQGQSVERVIAGPVPANPFVRDLIAVGKDRYHFVTADFLKGGEEHLRINGPSLPREPNPGPVIQAALAAPHLRGLSNWLRLPTYRVSETEQGWRVTIDDVRYSRMQSGGLGSAVVELDKDLKLVRAPPSNGAH
>NZ_CP006003.1|WP_046711282.1|1596518_1597385_-|50S-ribosomal-protein-L11-methyltransferase
MSQTYLSLTVELPEEASEAVQDLLHESGALGLEVRDRETPTMPGVKPPNAGESIVIGYFEDRPTAESARDSVAESFPDARLALDEQPQQDWSNEWKSLIKSVHVGRLWVGPPWDVANAPADAVRLVIEPKMAFGTGDHPTTSLCLAAVDAYMTDHPGASVLDVGTGTGVLAIAAKKLGAGRVVATDNDPTSVELAQENLTDNGTPDIDVSGKELTAVEGTFDLVLANILANTLIELAPLIAPKAKDRLVLAGVLSHQRADVEAAYRNLGFTVLPGATQGEWVRIDLKR
>NZ_CP006003.1|WP_082164981.1|1599208_1606495_-|hypothetical-protein
MRGRRHGPAEVRRGLPMTRLMKPSPRNSRAPGKSVQMRRLLSLLAIGLYGVNLLSSCGPLPGPEGNEALEGFSASRLSGTERLLAPAGTVVDTNAQAGVTPGATEGNYSLTADGAATYSVPLWVPPGRAGMQPELALSYNSRSGMGVAGVGFTLGGTPSRITRCRKSVAQDGAVGQVRFDTSDAFCLDGARLVHTNPSVAAYGANGSEYRTEVDSFARVTLFASTPNGPPDSFEVRQKNGRILTYAAKLDGGRVIPQRSPPTSVNTDTLETVRFAWALSEVRDRQGNYMRLLHDRMGSAEVGYDHVLRRIEYTGSHTDASVAVPQRSVVFSYEAGDVDASYVAGFKLRSSLRLSRIQMYAPDVPVSQTQPGASTLWRSYTLKYFEGSERSISGRSLLKSVEECDGRNVCKAPTTFSWGMGSESYTTIHTGISDVIANDNMLGGVNPYAARDFWTLQLADVNGDGKDDLLYRVPIFGPSGTFSRAEWRLRLSTGSGFGAAMNVSLPVVRVGDSLDDLAPVDMDMDGKTDILALNRTHCDTNISGHNQLYRFNGTNFTPTINDGSEAYAVCHTTLADRLPTGLQTADLNADGLPDLIRSWRHVNATEVTPTEWAWRLNPLGSTGALNFPAYTSLGIRSGLEHAGLVVDVDGDGASELLLRKPQSNTPDDFASYYTAVGVNSDGSVREVETTLSALAWDYDRAPPHHYLNLWMVDVTGDGLPDALTLHRERNPRDNQSRQLKLAVNTGNGFLRPTIIALPLSSMPGPSLWAEGGRTIDNGLRVLDFDMDGRQDLLLTEYYPTGDASQPPREYLTVLQSTGTGFTSRFLSSQSASRIPVGRASGDGFSKPPGGTGPLEGAGWGQKQTRVGDINGDGLQDIVQVAFSSSSLVVHLRQGGKPDLLQEVRDGHGKFVRFEHVPLRALQDAGRYTPGTCIYPQYCGTRGMWVVGSYETDSGQGDVPELPFRKYDVSYAEGRTDLRGRGWLGFGRRVVTDTSTNATTATVYDNVTRTGTLYLHAGSPKSETVNTPLASGTHSRVTTFFREARTAPEGVTRFLCPVKTTVTETEGIHGDVSASVLDQQCDAYGNVTSQDTFSSFSATDTVGNRLQRTLQMENHPSTWVLGLPRRVTDTSTSPPTNLFPSGQQSTRARTYQYCASEPCPDSNLVWRVVTEPEGSADTRLVVTYARDLTGQVTSAEATHGGTAASRQESISYDNFEKLFPTVGINAEGHRDDTAHHPALGVVALTEDANGVRMRAAYDGFGRLRMETAPYREGGASAGAPLQVDYMRQGLSTQVTSQRAGSPTVVQRLDRWARPISVSTQASDGRWTYATTEYDFFGRPSRTTQPRFEAEPAKATTFTYDNLGRLLKATRPDGAFQEWVHEGRGARYFDELRNWTTTVYSPLGQPLVVEELQQTGSSVTTIYSYGPFGLLESVRDYSSGVTSMEYDVLGRRTKLMEPNLGPLVTAYDAFGDVRQETDAGGRQTTYGYDRLGREVLVDNADGLTRFTWDTAAHGVGGLAQAVNERSATTTADDVVSAYTYDTLSRPTQEALTLGGATHLVDQSYDSFGRPDTLWYPAGPGGTRLTAQQVYTATGYPLAVKDASTGAEYWRARERDAAGRLLVEARGANVLTTWNRYDHRGRLRFIESRVGATTAGSPLQSLSYGYNTNNSLSSRHDTLKQVSESFQYDGLDRLKRWTVQARCDNTVTDYGYSTLGNLTSKKVVRNGTQTEQLYFQYGAQSAPRHAITGVSTTANFSTLSESFTYDAAGNQTNAAEAGTGRFRNISYTSFNLPATLQTQQGTLSFTYDAFQRRTLKQNGNGDSTLYVGGVYEKRRQAGVDSHIFLVLAEGRAVAQVTLASSSGATPVTSYLLNDYLGSVETVTDAAGTVLEQRKYQPFGVQGRADDPTLAPATTASSVRLGFTSHEWDDEAGLVNMKGRLYDPKVGRFLTPDPVVQAPYASQSLNRYSYVLNNPLRYVDPSGFSGEEAISSVMGTAPTADGELTSICGSPNPSDCISPTVGAANGTETEVANSSDGGDSSPAAIAGGADKNGGLEPGVVQSSCRFCVGDGRGLFAFSDKQMDDLQGWARDTKWAYVPGAGLATTSLNLMLSLMRGNTDNLASEAAQVVLSFVSAKVVGAAIKKAAPFIASATSGLFLRGKQYLAANFVLGGCFVAGTPVLTTKGLEPIEDVAAGDWVWAWDEETRAPGWHRVARTFIKPEMVVLRVVLEAPDGTREALGVTAEHPFGVAGRGWTEAQALRSGDEVESATGPRMRVVSIATSAEREAVFNFEVEDAHTYFVGEFSSWVHNNSVSGRGGQLILVAEELLRQAVRRPPEVLNGFRIFGNKGLVGPTFQRNVLLIEAELKGGASLKSLVAALADEARAAGASRLSITGHAIINDGFLSPRVAQRYGFQFRQINSDTVELVMDVAQR

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Crispr_ID: NZ_CP006003_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP006003_8

1652831-1652920

Orphan

Consensus_repeat	Method
TGCGCGGGGCCGCATGCCGTGGCGCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP006003_8

>merge|NZ_CP006003|8|1652831-1652920|CRISPRCasFinder
TGCGCGGGGCCGCATGCCGTGGCGCGTAGGTCAGCGCCGTCATGCGGGAGTGCCGGGGTGGGGTTGCGCGAGGCCGCATGCCGTGGCGCG

>NZ_CP006003|8|8|1652831-1652920|CRISPRCasFinder
TGCGCGGGGCCGCATGCCGTGGCGCG	TAGGTCAGCGCCGTCATGCGGGAGTGCCGGGGTGGGGT
TGCGCGAGGCCGCATGCCGTGGCGCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP006003.1\|WP_046711315.1\|1649949_1651383_+\|histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_CP006003.1\|WP_082165562.1\|1655791_1657336_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|341130
NZ_CP006003.1\|WP_046711323.1\|1662902_1663130_+\|DUF350-domain-containing-protein	unknown	unknown	gnl\|CDD\|377187
NZ_CP006003.1\|WP_082164982.1\|1640670_1642032_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_052771426.1\|1660462_1660813_+\|adenosylmethionine-decarboxylase	unknown	unknown	gnl\|CDD\|376892
NZ_CP006003.1\|WP_046711320.1\|1658505_1659243_-\|peptidylprolyl-isomerase	unknown	unknown	gnl\|CDD\|365914
NZ_CP006003.1\|WP_046711317.1\|1653121_1654378_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|239109
NZ_CP006003.1\|WP_046711309.1\|1638634_1639096_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046711307.1\|1636773_1638147_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224423
NZ_CP006003.1\|WP_046711324.1\|1663177_1664674_+\|spermidine-synthase	unknown	unknown	gnl\|CDD\|235139
NZ_CP006003.1\|WP_046711312.1\|1648000_1648591_-\|GAF-domain-containing-protein	unknown	unknown	gnl\|CDD\|214500
NZ_CP006003.1\|WP_046711310.1\|1642178_1645955_-\|DUF3858-domain-containing-protein	unknown	unknown	gnl\|CDD\|274350
NZ_CP006003.1\|WP_046711311.1\|1646031_1647885_-\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP006003.1\|WP_046711316.1\|1651379_1652723_+\|sigma-54-dependent-Fis-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225114
NZ_CP006003.1\|WP_046711314.1\|1649443_1649899_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274008
NZ_CP006003.1\|WP_046711322.1\|1660809_1662711_+\|DUF4178-domain-containing-protein	unknown	unknown	gnl\|CDD\|379368
NZ_CP006003.1\|WP_046711318.1\|1657338_1657752_-\|secondary-thiamine-phosphate-synthase	unknown	unknown	gnl\|CDD\|376651
NZ_CP006003.1\|WP_052770788.1\|1638289_1638616_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046711319.1\|1657759_1658506_-\|phospholipase	unknown	unknown	gnl\|CDD\|223477
NZ_CP006003.1\|WP_046711321.1\|1659333_1660560_-\|lipase-like-protein	unknown	unknown	gnl\|CDD\|224001

Protein	Function_ID	Function_description	E-value
NZ_CP006003.1\|WP_046711319.1\|1657759_1658506_-\|phospholipase	gnl\|CDD\|223477	COG0400, COG0400, Predicted esterase [General function prediction only].	1.94361e-30
NZ_CP006003.1\|WP_082165562.1\|1655791_1657336_+\|hypothetical-protein	gnl\|CDD\|341130	cd16913, YkuD_like, L,D-transpeptidases/carboxypeptidases similar to Bacillus YkuD. Members of the YkuD-like family of proteins are found in a range of bacteria. The best studied member Bacillus YkuD has been shown to act as an L,D-transpeptidase that gives rise to an alternative pathway for peptidoglycan cross-linking. Another member Helicobacter pylori Csd6 functions as an L,D-carboxypeptidase and regulates helical cell shape and motility. The conserved region contains a conserved histidine and cysteine, with the cysteine thought to be an active site residue.	1.03546e-27
NZ_CP006003.1\|WP_046711323.1\|1662902_1663130_+\|DUF350-domain-containing-protein	gnl\|CDD\|377187	pfam03994, DUF350, Domain of Unknown Function (DUF350). This domain occurs in a small set of of bacterial proteins. It has two transmembrane regions, and often occurs as tandem repeats. The are no conserved catalytic residues.	1.46599e-05
NZ_CP006003.1\|WP_046711315.1\|1649949_1651383_+\|histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	1.69127e-37
NZ_CP006003.1\|WP_046711320.1\|1658505_1659243_-\|peptidylprolyl-isomerase	gnl\|CDD\|365914	pfam00160, Pro_isomerase, Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD. The peptidyl-prolyl cis-trans isomerases, also known as cyclophilins, share this domain of about 109 amino acids. Cyclophilins have been found in all organisms studied so far and catalyze peptidyl-prolyl isomerisation during which the peptide bond preceding proline (the peptidyl-prolyl bond) is stabilized in the cis conformation. Mammalian cyclophilin A (CypA) is a major cellular target for the immunosuppressive drug cyclosporin A (CsA). Other roles for cyclophilins may include chaperone and cell signalling function.	1.00945e-64
NZ_CP006003.1\|WP_046711317.1\|1653121_1654378_+\|hypothetical-protein	gnl\|CDD\|239109	cd02549, Peptidase_C39A, A sub-family of peptidase family C39. Peptidase family C39 mostly contains bacteriocin-processing endopeptidases from bacteria. The cysteine peptidases in family C39 cleave the "double-glycine" leader peptides from the precursors of various bacteriocins (mostly non-lantibiotic). The cleavage is mediated by the transporter as part of the secretion process. Bacteriocins are antibiotic proteins secreted by some species of bacteria that inhibit the growth of other bacterial species. The bacteriocin is synthesized as a precursor with an N-terminal leader peptide, and processing involves removal of the leader peptide by cleavage at a Gly-Gly bond, followed by translocation of the mature bacteriocin across the cytoplasmic membrane. Most endopeptidases of family C39 are N-terminal domains in larger proteins (ABC transporters) that serve both functions. The proposed protease active site is conserved in this sub-family of proteins with a single peptidase domain, which are lacking the nucleotide-binding transporter signature or have different domain architectures.	1.93359e-23
NZ_CP006003.1\|WP_046711318.1\|1657338_1657752_-\|secondary-thiamine-phosphate-synthase	gnl\|CDD\|376651	pfam01894, UPF0047, Uncharacterized protein family UPF0047. This family has no known function. The alignment contains a conserved aspartate and histidine that may be functionally important.	1.99228e-54
NZ_CP006003.1\|WP_046711324.1\|1663177_1664674_+\|spermidine-synthase	gnl\|CDD\|235139	PRK03612, PRK03612, polyamine aminopropyltransferase.	0
NZ_CP006003.1\|WP_046711312.1\|1648000_1648591_-\|GAF-domain-containing-protein	gnl\|CDD\|214500	smart00065, GAF, Domain present in phytochromes and cGMP-specific phosphodiesterases. Mutations within these domains in PDE6B result in autosomal recessive inheritance of retinitis pigmentosa.	2.45873e-10
NZ_CP006003.1\|WP_046711310.1\|1642178_1645955_-\|DUF3858-domain-containing-protein	gnl\|CDD\|274350	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein. This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.	8.52145e-09
NZ_CP006003.1\|WP_046711311.1\|1646031_1647885_-\|serine/threonine-protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	5.46089e-93
NZ_CP006003.1\|WP_046711316.1\|1651379_1652723_+\|sigma-54-dependent-Fis-family-transcriptional-regulator	gnl\|CDD\|225114	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms].	0
NZ_CP006003.1\|WP_046711314.1\|1649443_1649899_+\|hypothetical-protein	gnl\|CDD\|274008	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins].	0.00300148
NZ_CP006003.1\|WP_046711322.1\|1660809_1662711_+\|DUF4178-domain-containing-protein	gnl\|CDD\|379368	pfam13785, DUF4178, Domain of unknown function (DUF4178).	7.28516e-20
NZ_CP006003.1\|WP_046711307.1\|1636773_1638147_+\|hypothetical-protein	gnl\|CDD\|224423	COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism].	2.05799e-13
NZ_CP006003.1\|WP_052771426.1\|1660462_1660813_+\|adenosylmethionine-decarboxylase	gnl\|CDD\|376892	pfam02675, AdoMet_dc, S-adenosylmethionine decarboxylase. This family contains several S-adenosylmethionine decarboxylase proteins from bacterial and archaebacterial species. S-adenosylmethionine decarboxylase (AdoMetDC), a key enzyme in the biosynthesis of spermidine and spermine, is first synthesized as a proenzyme, which is cleaved post translationally to form alpha and beta subunits. The alpha subunit contains a covalently bound pyruvoyl group derived from serine that is essential for activity.	1.15304e-30
NZ_CP006003.1\|WP_046711321.1\|1659333_1660560_-\|lipase-like-protein	gnl\|CDD\|224001	COG1075, LipA, Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only].	0.000692954

>NZ_CP006003.1|WP_046711316.1|1651379_1652723_+|sigma-54-dependent-Fis-family-transcriptional-regulator
MSSARILVVDDDPQARDLLQRLLGPLGSVAQAAHPKAAQEKLAEGAFDLVLTDMAMPEPGDGLKVLQEVKAHLPDTPVIVVTAFGNIEGALDSIQLGAFDYLAKPFDVDAILRIARRALEQKRLVEENRSLRQQVDRTALVGRSPALLEVYKQVARAAASNVPVLITGETGTGKEMVARALHKRSPRSTGPFIPVDCGAITESLMESELFGHAKGSFTGASGARRGVFEEANGGTLFLDEIGDVGMKVQSQLLRVLQEGEIRRVGESVPVKVDARVVAATNKDLKERVAEGVFREDLLYRLDVVHLHLPPLRERREDIPALVQHFASRHARGGVSPVVTSEAMGRLTAYDWPGNVRQLENVVARALALNVTGVLGPQDFPEPIGDAPKRLTGLAGDMPSLAELSRRYAAHVLQSVGGNKSEAARLLDVDRKTLYKLLDGAGTETPEA
>NZ_CP006003.1|WP_046711315.1|1649949_1651383_+|histidine-kinase
MVSTRKSIRGYRAGFFFVVALLSAVTAFMLWTEVRTGAQVDALVKQALERAGLIGRIRVDALSLESAIEAHIRATDDRERGAADAVMEEILTDIRFASEAYTRNLPSGDKAMWERFNAACQGLADQVRAAAVFSQRREADRARRHLAERIRPVAAQLDALGESLSEENANEARRLVGRLADLRVRNTALGAGTTLFAMLLSVLIGWHITRLLKRQDATIQGQLEELGRHNQELDAFTRRVAHDLISPLAPLKGYLTLIRRTGAVKDAGALEMLAQCESSAVRMGELIEALLRFCRAGTRGERTVGELDTAVTTVLLEVSQVAALQNVALDRALEAGVAVDCPGQLLQVTARNLLTNAVKYSAGRPDAKVTVSVATDGTDAVLEVSDNGIGMGPTVLTSLFQPFFRAPEVRSLPGHGLGLVTTKRVVEAHGGTLAVRSEEGKGTRVVVRFPKVARQTVGSAVQSAESSTASAIRKVAS
>NZ_CP006003.1|WP_046711314.1|1649443_1649899_+|hypothetical-protein
MRSLGFAMATAVAWLATGCARIPPERLEAQVLETLHWQRQYEAERERMESVAVKLAALEAAIERLKQERAEAEQGRAALMEELARTEADRHALEEHNTQLLARERELNELREMHEQLSDVFYESALERARRRLPSARQPDAPAAGDGTAAP
>NZ_CP006003.1|WP_046711312.1|1648000_1648591_-|GAF-domain-containing-protein
MVEAFSKVSEASKLLLEKGLCPATAVESLAMVGHAMGVDRAYIFENRVSQTYGRFVTDLRYAWAEPPTASPLANPVLRAFSFRDFAPGWVDMLEAGMVVACPTRDAPPMMRDLLERQGTHSILLCPINPSRQQWWGVAVFEDCRQPRAWKPEDVSLLKSLSRAVAASVRHGQMRSSLDQVRNSLRAAVGRTPASGH
>NZ_CP006003.1|WP_046711311.1|1646031_1647885_-|serine/threonine-protein-kinase
MSSIDPTAISRPRSPDLISGYRLEKLVGTGGMGEVHKATQLSLGRTVAVKLLNQELAKDPSFIARFQKEAAALAALSHPHVVSIVDKGKTDATYYLVMEFVDGPSLRELIRQSQFDMMGALRRMLEICRAIEYAHGRGVIHRDLKPENILLDQQAGGIAKVSDFGLASFLDDASPSSRYALTSTHVSMGTLSYMAPEQRVDAKNADARADIFSLGVILYEWLTGEVPLGTFDPPSQRKPGLDARLDGIVTKCLKPDPEDRYPSVAALIADLELLVPGSLPSMLPVKQTRVQRFKAGVRKVVRTTMQAAAVVMVLAASFVLATAFYLSGERRAASAPGATLMAYLGEPRIQPVPGREESNPERRRLTLGEGLAEQSLVVAGRPVTLEDKTLVFPWQDDEQSVGRVRVDVTRRDGDSLSLTAQLLTEAPPLTFERRLRDMFSLYQPSPPPTASMLLLGSTGRYVALVHNGVGEPLRLEWALGERRGAMLGIESPKAGPVNVELAVDAEGRLEAFLGTGKDRRALFEPLVLGAGWVEQFGDAPFPGFGCIEGTCRVSGITYVLKQSPPGGTTAPVPPTPTPSPPKVAAAVPAKAVVPKKAPPPPPKKQPVKPAPKNGKRR
>NZ_CP006003.1|WP_046711310.1|1642178_1645955_-|DUF3858-domain-containing-protein
MRTFRRGLTAFALVAGLTGCSHSPTTSVAPRVLESAAEKARSGTDEARTLAFAGFHAYLMEGDAAAAQQRFDAAVAKDPADPYALIGQHLLARRAGRPDRALVAALEVVTRAPTHPLALIGARYALDTVGTAPPLDEAILAAAQKALAAGASGETAYLLRGTRLSVAVTRGDLKARDAVLKELGGVSEATLVGPFSAFHVLSWDEAWPTGQGGSLAGPFTGAFGALPARKLLAPDGRLDLGGEPGEGDVYLMAFDAEVPEGATYVARSVSAASHQVVVDGTPVLERAAWTQATSTVTSRAVKLSAGKHRIIVRQLKGGTSGVLSFSLLREDGQPANVRFTAATGPAPATWGSAPSLAEAKGVYPTAKSIKDALSGEAGELLSTFLAARDGLARDADGARRLMADVDATTPALLALRAEVAAADRTVPSKVARGRATRDLEALLSKDTTNVAAMLLRADLFMDDGQAASALETLKTASEAVQPPGFPLFLMRARAALTLDVDALAEESLAAALQLQPQLCEALGLQYNLARRRDAVERSNTLVEAQKDCPGVAARRADHARTRGDLEAAAREYAQLLARDPTSVSAGTSLSSLYVGLRRHDDAIAVLEKLAVTWPRNTELLKRMADVREYSGKSAEALALREKALALEGDDLSLRRAVERAKTGKELLQEFAIDGQEALRSYDAEPVTGGAAVFVLDAAAVRVYPDGSIVNRIHTIQKALEQSGVQEIAEVNVPRGAQVLALRTLKADGRVLEPENIEGKDTVSLPGVQVGDSVQVEYLLAESPRGPAQPGFTASAFYFQIANQPNAWTTYTVAAPKGTGMKVDAHAMKAPQPTVKGDEEVFHYEARRVPPFIPEPDAPPSGNEYLPFVMVGAGATGNDSLARVYGDAFQERWARTAEVVRFTREATQGKEGLEAVKALHAAVMQRFSGRDNGLGQSAASTVAQDRGSRLTVLKAGLEELGIPSRVAAVRTFNVDPAEYLFPNDSLLPYAALRVEVPGSEPVWVDTSVRYGPFGELPEFAMGELPAYLLPEPGRKLEVVKTPATKQSTGKQVRLTLSLDADGKMTGKGEETYTGFEAAQLAEAFNQLSAESRNQALQGAVARYFGGAALSSVTLDHKDQVGAPFVLRYEFTVPRFGRLEGGNRMALGPLTFPAQLGRRYVQLSSRRTPLYIDNTEASSTQVTLSLPSGWRLPDPQPPIDVKNPFGHFTRTEKQEGATLTITESLRLPRARVAPRQYEQFAGFTGDVDLIQTREMFLVKQ
>NZ_CP006003.1|WP_082164982.1|1640670_1642032_-|hypothetical-protein
MSPRSWLWMVALLSAPVVQAQTTPVPAADPSYDGREYGEGEFDDDSEEEIAPMAPQPPPALPTEQPSRRPYAGAVWASGHWYWDGDEWRFNQGTWLAPMDGYQFVNGYWEEDRGAWYWVSGGWARRGTTEVEIPIAVSSEALTVQQAPPAPRQEVRPAAPSADLTWEPGYWYWSGNNWDWVDGTWASPPRAGLVFVSPRWVQRGLSWHFVSGGWAPRGSLHVTVPVFRHARVSVRWGHPNYFAHTWYRAPAVRYYYHRPWRASGHYYRHDRVWRSPTYYHRASPGPGRPGYHRRDDSWRGRDDRLEEPQPRAGAPRALARPQPPLLAPVRWGHPNYFAHTWYRAPAVRYYYHRPWRASGHYYRHDRVWRSPTYYHRASPGPGRPGYHRRDDSWRGRDDRWKSHNRGPERHERWRAPQPPLPRPRGPRGHARPRRRPPPRRTRRRAGGDGDRRR
>NZ_CP006003.1|WP_046711309.1|1638634_1639096_+|hypothetical-protein
MIAIAVLLYLLCGPCSDARPARVERSITMKFLRKQLPWSVAVLLAVSAVVFVGAPASAEPSEDAVCDEVSSGATEAGLSVCVQSFCNDESDCWNACPSALSVACVQGACYYQQSTGGGGGGGPVCPMSFCSEDFHCECKGYTGVCGSDNLCYY
>NZ_CP006003.1|WP_052770788.1|1638289_1638616_+|hypothetical-protein
MLFAVMLLSLGAARAESGDAVVCEASSSPQALFCSEGDCLSESDCWSLCPIARSVFCNASNVCEFDVGGGGGGGGGDPVCEMQECSEDRHCVCNGRPGSCGPDSICQF
>NZ_CP006003.1|WP_046711307.1|1636773_1638147_+|hypothetical-protein
MRTTRWVILVLALMGCSSSDPKPEAPLPPEEQETDSKPLTVTVLGSGQATAGGQQWAYQLLRLQEEGKAASYAQWFPPRSPGARPVMMLTRPYDGITWTGEAVDAKWGQRGNGFHPDDSEPGHHAGSSNIVYTISTPELIAGESFFYLYNGFGVLNVFGRFYAGGSIQNDRDDMHAGLRFLEQAPEVDRSRIGIQGGSWGGFEALYAAADAPAAVRPRAGVALFPLSDFARQFEYLETVIPSRVSDPWVRSQYATFFEPYRRRIVAATGGPPGAPGADYTSWTREHLAPRLTTPFLVLHEDWDTLVPVEQTQTLAPLVGPTMSALYIQHLEVPNWNTRALDHGQLVVQYGHALTTVSLGYLLTNLGSEEQSLYVPFVQDVLVGWLQAQRVLQLNGRDVSQVAPRLLELADPRVTLVEMTSGSVYSGSEGVAVLVNALWGTQHTAGNIREVLSTGLPP
>NZ_CP006003.1|WP_046711317.1|1653121_1654378_+|hypothetical-protein
MNARSLSTLALLITSTQTACVSQQKGREELPVEEPGAPARLWRRSASERDFERFTREGTAVTADGALVLEASARTDSVPVPAGRLEDGSTRYHEATYRLGSAVSEVQLVPGGFNSVIPSFDALTPPGTWVKVTLAARIEGVWTKDYHLGVWAFDKEPVARHSVEGQGDADGQVFTDTLNLKRRADALRMTVWLFSSNPEATPRVRALSAAVSDKQGVAWDGGGDRSVWGTVLEVPGHSQMLYPDGGPVWCSPTSTTMLLAYWGRRLGRPELVTTVPSSADRTYDWVYKGTGNWVFNTAYASAMGDGALHGAVLRLDGFAQVERLIAAGIPVSISIAYEEGALTGSPVRSSDGHLIVLKGFTPEGDVVCNDPAFKTDETVSVTYKREELWRAWQHSRGATYVLWPSGTALPVELIGLLR
>NZ_CP006003.1|WP_082165562.1|1655791_1657336_+|hypothetical-protein
MRAYPSLALARARRKGVLLKGSVTVQLRGQVPEEDTDAPPPAEQLVVIPDRKNPSEELVLGPDGEPLEDTSLVLDDPALGLEGEEPDPTVSTSPDAGSEPVAIPYQPDAGSLRVLRSIAVRSEPRQSSPPLGTVAQDMRVLWKSETAMRSPECETWVEIQPRGWVCERYLERNFREPRLRDLPRLREGELTPGTYARVVGKRVRAYPSLALARARRKGVLLKGSVTVQLRGQVRVGRRTFWRTTDGQYLEARVLREYRPSAFVGVDAEQMSELSSPFAWAQSRLKPTAPIVVRVAPDEKAAPETVLPPRTLVAVRELSPDGRWVLISEDHWVARDDLHVAWFTHAPPGVEPGERWLDVDLEAQVLVAYEGERPVYATLVSSGKPGTDTPEGLYRVWIKFAEADMTGSGTAGNDTYRVATVPWTMFFERDYALHTAYWHDRFGEPTSHGCVNLSPRDARLLYTWAAPEVPTGWSMVHATPDSPGSWVRIRGQASLPPKPQKERKARVVASTRGLR
>NZ_CP006003.1|WP_046711318.1|1657338_1657752_-|secondary-thiamine-phosphate-synthase
MYHAKQLTVSTQGRGFTDITRDVREVVEHSGLEQGLCTVFLHHTSASLVLSENADPDVRRDLEAFFARLVKDGDPLFVHDAEGPDDMPAHVRTVLTQNSLSIPVKNGAPDLGTWQGVYVWEHRTSPHRRRVTVSVVG
>NZ_CP006003.1|WP_046711319.1|1657759_1658506_-|phospholipase
MSQPKLRRVATRLGELDCNVVDGLSEGATPELVVVLCHGFGAPATDLVMLAPEIVALEASLAGRVRFVFPGAPLSLAQWGMASGRAWFHLPESIMRGQQRDWDTYGKSVPEGLPAARRAVTSVVDAVSTATKLPYNRIVLGGFSQGGMVTTDVALRLEECPAGLCILSGTLLAEAEWTQKAKARQGLPVFQAHGRHDDVLPFAAAERLRDTLVKAGLSVDFFPFDGPHTIDEGELTRLAAFLKARLGG
>NZ_CP006003.1|WP_046711320.1|1658505_1659243_-|peptidylprolyl-isomerase
MTFRILTALVLSLSLAACKDSSDKKEPSAATPTPPAATKPADKPVAATPPPAPPEATGEWTKKVQAGQDLLATMETNQGTIELRLFSKDAPLTVANFVGLATGEKTWTDPSSGEKVTGRPLYNGVIFHRVIPNFMIQGGDPTGTGRGDPGYRFADEFQSGRTFNKTGLLAMANAGPGTNGSQFFITTAVTDFLNNRHTIFGEVTKGYDVVEKISKVKTAPGDRPVEPVVIQKITLADAPATAGAK
>NZ_CP006003.1|WP_046711321.1|1659333_1660560_-|lipase-like-protein
MSSSKSAANAAASLSNPGEQPLASTSHSCPVVSFEVLPPLPTLFSTSPDARKPLVPPRAPPALASGPRLPLRSAGEMTQPSPPEVPVSPIPTPSPEREPGAIARLTRGLRGLPAAPRWWGPGCGGMAGWLLNLPAGAPPSVDLTPRFHALLARVRDGQPVLPAEAWRHQYVLVRGMLGDELPGYLLDNVQRLERRGLDVREAPVDTEGLLLDNVAVLREALLDAAHFGRSVVLVGHSKGGVECTAVLALYPELRRVVRAVVTLQAPYGGSPIAHDLATTPEMRRLIDFAFPLLFHGVSRSVEELSYTKRMEFIRRHPYPTDIPTVSLATSRLSRLSSLYALQRYLDERYQYASDGMVTALDAEVPGAGMVRLSDMDHAEAALRAFPGFSRYHPGDLTEVMVALALEPR
>NZ_CP006003.1|WP_052771426.1|1660462_1660813_+|adenosylmethionine-decarboxylase
MTTGQEWLVDASGCSPGLLKDAAALAALFEELIVLLDLKVVGQPQWHVFPEPGGITGLTLLAESHLAIHTFPEHGFAALNVYCCRPRSRPDFESLLARRLGAASCEVRELKRGVMA
>NZ_CP006003.1|WP_046711322.1|1660809_1662711_+|DUF4178-domain-containing-protein
MSQGRCPSCGADVEFTAGSAQVVVCSHCQTVVARKGDDFESHGKIGRIVPTDSPLQLGAEGRYARSAFRVVGHLQKDHGAGPWDEWYVEFDDGRAAWMSESEGAFHLLLDAGVEEGLQLEDMHPGERLKLRNRVWVVEERGHGTVVAAEGQLPSDVDPTQDSYYVDATGSNGAFLTLDFGTRHRDPEVFIGERLKLEQLGIPSDQLRPRAKRKVDLQQARCTECNGPLELRAPDQSLRVACPFCGALLDVRKGKLSFLRLLEKPDHPPLIPLGAKGTLKSTEWMCIGFLVRSCTVEGVRYPWEEYLLYHRAKGFVWLMNSNGHWVFLEPVAAGDVSLAPLTSAFFDKRRYKAFQNVHAVTETVQGEFYWKVQAGESAEATEYVNPPYSLNVDATEDEVTYTHGEYLAPEVIQKAFNLERLPSPEGIQPSQPNPFSQRMKSTFLWSFIWFLGLVVLSGLFSISSLNRVVLEQSITVPPEAMSNTPSATRFSEPFELSKRGNMKVEVAAGLGNSWLGVQGDLVNQDTGDVTTFYQELSYYFGQDSDGSWSEGSPSETLYLSTLPAGKYVLRTTASFDASPQPTARNYSVKLIHDSPNGSWFCVALVLMLLGPVFAFFRSHNFETRRWADSNLGNH
>NZ_CP006003.1|WP_046711323.1|1662902_1663130_+|DUF350-domain-containing-protein
MLLLGVVVSWQGVLASVIYSLIGLAVFVAGFYVIRLIMPFDVHKELEVDQNTAVGIVIGSFILGLSIIVAAAIGG
>NZ_CP006003.1|WP_046711324.1|1663177_1664674_+|spermidine-synthase
MNKTLLYITVIVIATCGLVYELVVGALASYLLGDSITQFSTVIGGYLFAMGIGSYLSRYIDKGVAQRFVEVELAVALLGGICAPVLFLTFTLTDMFQVALYGSVIVIGALVGLEIPLLLRILKDQLKFKDLVSQVLSLDYLGALAASVAFPLLLVPKLGLVRTSLLFGILNAAVGLWSTWLLAPLLGNPLRLRIKAVVLTVFLVVGFALGDRLTTFYEDQLYADDVVHASSSPYQRIILTRGKRGFSLFLNGNLQFASLDEYRYHESLVHPAMVRAGKVEHVLILGGGDGLAAREVLRYPEVRSVTLVDLDPAITGLAMRYDELVKLNHHSLTDARMRVINTDAMQFLMEGKQQYDVVIVDFPDPNNFALGKLYTTGFYKLLKKRVAPDGVAVVQSTSPLFARRSFWCVENTLRAAGYWTEPYHALVPSFGEWGYVLVAHEPPGHHRALPEGLRFLDLPTLESLTRFPPDMGPLPTEVNRLNNQVLVHYYEEEWRRWN

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Crispr_ID: NZ_CP006003_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP006003_9

1931780-1931862

Orphan

Consensus_repeat	Method
AAGGGCGGCAAGACGCTGGGCCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP006003_9

>merge|NZ_CP006003|9|1931780-1931862|CRISPRCasFinder
AAGGGCGGCAAGACGCTGGGCCGCAAGCCGTCCCCCGCGAAGGAGGCCGCGCCCGAGTCGAAGGGCGGCAAGACGCTGGGGCG

>NZ_CP006003|9|9|1931780-1931862|CRISPRCasFinder
AAGGGCGGCAAGACGCTGGGCCG	CAAGCCGTCCCCCGCGAAGGAGGCCGCGCCCGAGTCG
AAGGGCGGCAAGACGCTGGGGCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP006003.1\|WP_052770800.1\|1922074_1922920_+\|metal-dependent-hydrolase	unknown	unknown	gnl\|CDD\|234811
NZ_CP006003.1\|WP_046711492.1\|1929691_1930273_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046711503.1\|1939888_1941193_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046711499.1\|1935990_1937040_-\|NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|365877
NZ_CP006003.1\|WP_046711496.1\|1933459_1934365_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NZ_CP006003.1\|WP_046711489.1\|1924622_1925312_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046711502.1\|1938981_1939866_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046711493.1\|1930301_1931237_+\|methionyl-tRNA-formyltransferase	unknown	unknown	gnl\|CDD\|234567
NZ_CP006003.1\|WP_052770799.1\|1918496_1918865_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|319939
NZ_CP006003.1\|WP_046711487.1\|1918889_1920008_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046717512.1\|1920007_1921858_-\|HSP90-family-protein	unknown	unknown	gnl\|CDD\|237603
NZ_CP006003.1\|WP_046711497.1\|1934502_1934796_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046711490.1\|1925775_1927887_+\|FUSC-family-protein	unknown	unknown	gnl\|CDD\|224208
NZ_CP006003.1\|WP_052770801.1\|1923094_1924486_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|369505
NZ_CP006003.1\|WP_046711495.1\|1932135_1933452_+\|16S-rRNA-(cytosine(967)-C(5))-methyltransferase-RsmB	unknown	unknown	gnl\|CDD\|237857
NZ_CP006003.1\|WP_046717515.1\|1942669_1943413_+\|serine/threonine-protein-phosphatase	unknown	unknown	gnl\|CDD\|223704
NZ_CP006003.1\|WP_046711500.1\|1937061_1937532_-\|TlpA-family-protein-disulfide-reductase	unknown	unknown	gnl\|CDD\|239264
NZ_CP006003.1\|WP_046711498.1\|1934872_1935970_+\|teichoic-acid-biosynthesis-protein	unknown	unknown	gnl\|CDD\|372626
NZ_CP006003.1\|WP_046711491.1\|1927991_1929584_-\|PBS-lyase	unknown	unknown	gnl\|CDD\|224331
NZ_CP006003.1\|WP_046711501.1\|1937694_1938813_+\|aminotransferase	unknown	unknown	gnl\|CDD\|235989

Protein	Function_ID	Function_description	E-value
NZ_CP006003.1\|WP_052770800.1\|1922074_1922920_+\|metal-dependent-hydrolase	gnl\|CDD\|234811	PRK00685, PRK00685, metal-dependent hydrolase; Provisional.	2.88417e-82
NZ_CP006003.1\|WP_046711499.1\|1935990_1937040_-\|NAD(P)-dependent-oxidoreductase	gnl\|CDD\|365877	pfam00106, adh_short, short chain dehydrogenase. This family contains a wide variety of dehydrogenases.	1.08037e-67
NZ_CP006003.1\|WP_046711496.1\|1933459_1934365_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	1.87365e-55
NZ_CP006003.1\|WP_046711493.1\|1930301_1931237_+\|methionyl-tRNA-formyltransferase	gnl\|CDD\|234567	PRK00005, fmt, methionyl-tRNA formyltransferase; Reviewed.	8.51197e-161
NZ_CP006003.1\|WP_052770799.1\|1918496_1918865_+\|hypothetical-protein	gnl\|CDD\|319939	cd08351, ChaP_like, ChaP, an enzyme involved in the biosynthesis of the antitumor agent chartreusin (cha), and similar proteins. ChaP is an enzyme involved in the biosynthesis of the potent antitumor agent chartreusin (cha). Cha is an aromatic polyketide glycoside produced by Streptomyces chartreusis. ChaP may play a role as a meta-cleavage dioxygenase in the oxidative rearrangement of the anthracyclic polyketide. ChaP belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.	3.03499e-23
NZ_CP006003.1\|WP_046717512.1\|1920007_1921858_-\|HSP90-family-protein	gnl\|CDD\|237603	PRK14083, PRK14083, HSP90 family protein; Provisional.	0
NZ_CP006003.1\|WP_046711490.1\|1925775_1927887_+\|FUSC-family-protein	gnl\|CDD\|224208	COG1289, COG1289, Predicted membrane protein [Function unknown].	2.02157e-30
NZ_CP006003.1\|WP_052770801.1\|1923094_1924486_+\|hypothetical-protein	gnl\|CDD\|369505	pfam07766, LETM1, LETM1-like protein. Members of this family are inner mitochondrial membrane proteins which play a role in potassium and hydrogen ion exchange. Deletion of LETM1 is thought to be involved in the development of Wolf-Hirschhorn syndrome in humans.	0.000264131
NZ_CP006003.1\|WP_046711495.1\|1932135_1933452_+\|16S-rRNA-(cytosine(967)-C(5))-methyltransferase-RsmB	gnl\|CDD\|237857	PRK14902, PRK14902, 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB.	6.4975e-150
NZ_CP006003.1\|WP_046717515.1\|1942669_1943413_+\|serine/threonine-protein-phosphatase	gnl\|CDD\|223704	COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms].	2.65666e-58
NZ_CP006003.1\|WP_046711500.1\|1937061_1937532_-\|TlpA-family-protein-disulfide-reductase	gnl\|CDD\|239264	cd02966, TlpA_like_family, TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.	3.3548e-19
NZ_CP006003.1\|WP_046711498.1\|1934872_1935970_+\|teichoic-acid-biosynthesis-protein	gnl\|CDD\|372626	pfam13528, Glyco_trans_1_3, Glycosyl transferase family 1.	5.26696e-173
NZ_CP006003.1\|WP_046711491.1\|1927991_1929584_-\|PBS-lyase	gnl\|CDD\|224331	COG1413, COG1413, FOG: HEAT repeat [Energy production and conversion].	1.05684e-11
NZ_CP006003.1\|WP_046711501.1\|1937694_1938813_+\|aminotransferase	gnl\|CDD\|235989	PRK07324, PRK07324, transaminase; Validated.	1.44498e-95

>NZ_CP006003.1|WP_046711493.1|1930301_1931237_+|methionyl-tRNA-formyltransferase
MSRPRIVFMGTPDFAVSSLEACFDLGDVVAVVTQPDKPKGRGNTVTAPPVKELAVARGVPVFQPAKLRTPPFVEELRRFSPDVCVVTAYGRILPKDILELPPKGCVNVHGSLLPRFRGAAPIQWSIAHGDTETGVSLMVMDEGLDTGPVLAMKSLPIGPEDTSATMYPKLAALGGEVLREFLPAYLSGALKPVPQPSEGVVLAPIIEKEEGKLDFTRPAIALERRLRAFTPWPGAFTSMGGKLVKVHRVKVAEGKGAPGTVLSAGAEGIEVACGEGSLVLLDIQLEGKRVMKAAEFLTGHKLAVGSQPFGT
>NZ_CP006003.1|WP_046711492.1|1929691_1930273_+|hypothetical-protein
MSDDTHKAPRPGYTRRTYLLDREFQLKYILLLAGIGAGSVAVFGALAYRLHASSVDSGVEAGDSIMWLTVLGSVGLGALLGLFGLLFTHRVAGPVHVMSLYVAALAAGRYPRLRPLRKKDELKRFFDRFSEAVDRIRQREADEAHALEGALAALKPVATTPEAREALETLSALCTRKRQAVDNPTASTFKSVA
>NZ_CP006003.1|WP_046711491.1|1927991_1929584_-|PBS-lyase
MSRPLAAWCVAAVLCFVACKSDPNTPDYWAGTLQQTRRAEDRVRLIEAMRTKTKVNESFLPMLHESLSQERKPEVKAALARAIGDVHHASSVEALSAAIDPAAGDMSSQLANKAMVTALGAIGDVRAVPALVPLLRAKDTYARIEAIQVLGSMKAKEAVEPLIVLATDESVEPFLNKKAIEALGHIGDGRAAPALIRMLTKERKGKSFYVESSFALFQLGQPAADALLPALEGRDAELLAWAKTNGVNPASYPMKAATVLGDLREKRAVEPLLKLLSFSHSDVQIQSLVRMQAADALGRLRATEAVKPLTTLVLETDPTVRDAYVKALVRLGGRDALPALEKAAGTGDWYAREVAVKGLAMLGDAREQPVLQKLATGEPARTAADCKATQEEGCEDAAGLGKKRADEITAHAALLEAGQACTGNAGCWVQRMDKATKPMLERAALEVGRAGSAEHAPALAAKLSERDTEVRLALILAMGWLVDGSQDAAKKVRETSLPDLRKQLQAEQGVTQYASVNEDLRRLLARIERT
>NZ_CP006003.1|WP_046711490.1|1925775_1927887_+|FUSC-family-protein
MNVFRRHLESFVRVEPVRPALGAGLRAALAVGLPMVVAATQHLPAVTWVGMAGLFVTLVDRGGPYRDRAVTMGAMTLLGAVMGLVSALQLPDWADVLLTLAWVTACGFARSYGDTPGLMGVVLANYTVVSLALPAQGLADALSRSGLFILGGLWAMMLALVLWPLRPYRPARLAISRCYRALASRAEEVGRWPLDGPPPPVNLVEVVDWESRVRMSLEDARSVLASTRRNRAGESNRGEHLLVLLEGADALLAMLVALPETLELAPREPRFHALRAEIQRALADHSRDLLHIARALEQEKHELEPSVWSTDRVRRALASLVTEGELPDPARAAYSHAEALLVRLREYSEALLEVANHLEDGGPVESDLPMGPHPASARSRPLLEPLRDNWGTDSVIFRHALRLGITAALATALVRGLGLNHGYWVIITVIVVLQPYSGMTFERGVQRAAGTLLGGALAAGLVALVRDPVVLLGAIMAFFAVAIAVKPMSLAAFQVLLAPALVLLAEIQTGDWELAGVRVINTLLGGVLALVGAWLLWPSPEHSRFPEEVANALRADRDYLLSVASARSDEEPQVREARRKLGLQLLSAEASFQRLLSEWRGSSRQLEPAMALLAYARRFGSAVTALAASRQGRKDLAPVIGYAGNVLEDLALAVEHRRAPSPLPRSAAQESLDVLSRTQMDRLVRQLTVLHKATVRAAPQLTG
>NZ_CP006003.1|WP_046711489.1|1924622_1925312_+|hypothetical-protein
MRVHQRDVEVGVAGRLLAGFLCVPERASGLVMLVGDEELAKDSSVREVLHAAGLATLGLDWRTADEEQAEDWTVREGAHVELIAHRLEVARDWLQRDDVLSLLPVGFLGMGLGAAAVLVAAAHQPQGVQAVVTLGGRPDKAGSVVAEVRVPTLVLGAGEDADRAMLARRVFDGLAPGMRKGLQLVEGASRRFEEAEPRARAARMAAAWFSDCFRAVAGPGVVEWSEGTA
>NZ_CP006003.1|WP_052770801.1|1923094_1924486_+|hypothetical-protein
MLDFSKAGWLTPLLNEAVAAHLGSPAPEESALRLGPGRARARAYLRRTLRASGLLYGTPADAPTALDAMPDNEFQARALEDQLFHAVLRTLAALALELARQVGAPEGRRVEQLLVLFCVLGGELALAEALAEQLAQGKPVTKRQVAKVEVALRKREPTLAGDPVYGLVLHNGAQYADAQLFCRQAIDYFASGRLSREQTRRRLDFASKQKALLVDVLTGLACVDRLPGTPARRAILKQVEDLRLPAAMASELKAAVKQSFERRRSVRDVVRQVRSVDMRHFLLEQTLLAALVDGRRTRRERAFIDTLADALHVPKVELHRLELEMAEFYARHRSIVDVFTVRDAASAMGDDMVAGMQETLEKNFYRLMQEVRETGDLAVLVAKVARRQKLTEDERQRMRAQLIDVAKAIPALAIFAAPGGLLLLAALAKLLPFSLLPSAFQDDDVPEVLPDDAEDFGPEREAG
>NZ_CP006003.1|WP_052770800.1|1922074_1922920_+|metal-dependent-hydrolase
MRNELRAVAVGALLTFGGTAMAQDAATPPAAPAPKKADAAKPAATKGKVEVTWWGHAAFVVRTPGGAVIAIDPWLTNPKAPKDAAQPEALDAILLTHGHFDHVGEAKALAQKTGAKVFGSFELVNQLGLPETQAVGANAGGTFQVKDVTLHLVEAVHSSSYQADPKAPAQYAGAPLGYVLKVDKGPTLYHAGDTAPFESMSLIATQFKPTVAMLPIGGHFTMGPAEAAQAARLLKVQSIVPMHFGTFPLLQGTPDALRGELKKTRPGTKVLELEPGKSTAL
>NZ_CP006003.1|WP_046717512.1|1920007_1921858_-|HSP90-family-protein
MDHRFQVSLRGVIDLLSHHLYSSPGVYLRELLQNATDAIRARQHLEPSHTGTVRLELVEKQDGGPPTLVFSDDGVGLTEEEIHRFLATIGESSKREALEARRKDFIGQFGIGLLSCFMVCDELLLVTRSARGDGRTLEWRGRHDGTYAVQESAHPLDKPGTQVFLVARADMAEWFAVERVRQLARHYGGLLPFPIHLSVGAEVERLDADGAPWRREYASAAERRKALLDYGREVFETEFIDCIPLRSQAGDVDGVAFVLPASPHFNAKQKHRVYLKHMLLSESAENLLPEWAFFVKCVVNANALRPTASRESFYEDDSLAQARVALGQGLRKYLMDLAHEDPRALQRLIGLHGLSVKALALDDDDFYRLVIGWLPFETSLGVTTLSEYRRAYPVVRYTSTLDGFRQVARVAGAQGLCIINAAYTHDAALLEKLPHVIQDAQVEPFSSSDLPQSFEELTMDERDAVFPLLRTAEQVLAPFHCGVAVKKFFPAEVPTLYSSDEEGSFRRDAERARDESDDLYASVLEGVMAAAGGEPVQLCFNLHNPVVRRLAAVSDRNMMKLSVEMLYVQALLLGQHPLNAQEMTLLNQGLLGLISAQLGTGGGGESDGGGSSGGLH
>NZ_CP006003.1|WP_046711487.1|1918889_1920008_-|hypothetical-protein
MSTDWREEAQALWDRASRQRSSESKVRLLEEAVRMADSHGDVQLGYELRDDLIDAATFGGYPDKALVAFAWCRGQQKKDPERFDPEAMLWKQKWVVGRIKEFPHISRKQIVDALDDIEQCFTKVDAGKRSVLKLRYQAARDMGDDVAEVDRLWDAWLAAPRDHLTDCRACELDDELDHHVEKGEWEQALRKAKPILDGRVKCAEIPHLTLGTLLYPLFKLGELEHAAELHRRGYALTSKNRDFLATVGDHLEFLTLTGNLARGLTLLEKHLEWTLDHGSHNDRFVFLVAATFLLERVLAAGDRDVVSLRLTKSFPEHRADGGYEVKALLAWMRQQAQAIATRFDTRNGTDRYARRLARIQRLTEEARAFPLD
>NZ_CP006003.1|WP_052770799.1|1918496_1918865_+|hypothetical-protein
MMQLDHLAVDARDVDASSQFLARILGAKAPVPEGADDDMRRIDLDHGCFVLFSPASEPRFSHVAFRVDAKRFAEVVERLRTERVPFGNDHFDTANGETGDPLGGAGRVYFNDPNGHLWEVTC
>NZ_CP006003.1|WP_046711495.1|1932135_1933452_+|16S-rRNA-(cytosine(967)-C(5))-methyltransferase-RsmB
MNPRALAILVLARVRATDAYLNVVLDTMLSESPPKDPRDAGLATELTYGATRRQLALDYAITRFADRKLDAMEDRVLAALRIGAYQIFHTRVPARAAVAETVQALKEVGLTRAAGFTNAILRKLAELPSPPLPSASDVAHHLSVRESHPQWLVERWLRQFGRERAEAMLVADNQSPPVVIRANTSKVTRDALLAQLQEVGVDAKAATVSPVGIILPPVGRVEDVYGYSEGLWQVQDEAAQLVGVYGAIPASARVLDACAAPGGKSCHLAQEHDVVAVDLHAHKLRKIDGEAKRLGLTSRLKAYAHDAAEPFPEAWGEFHAMLVDAPCSGLGTLRRHPELRYRRKEEDLSRLATLQRRILENCQESVPAGGLLVYAVCTMEPQEGQDQVEMFLRSHPEWTAEPPVLPGLKLPLTQAYLRTLPGPEGFDGFFAARLRKLY
>NZ_CP006003.1|WP_046711496.1|1933459_1934365_-|LysR-family-transcriptional-regulator
MQLESLKMFCDVVETGSFSRAAQLNHVTQSAVSQQIRALENRYEQKLLSRSARQVTPTPAGERLFRGCKEILARFAEVEQEIREQATEVAGTSTVSTIYSVGLHELNAVQKQLLKAHPKVNMRLNYRRNDQVYDDVILGAAEIGIVAYPQPRAGVDILPFRDDKLAVVCAPGHAFASKAKVSLTALSGVPFIAFDREAPTRKALDRLFREKNIDINPVMEMDNVETIKRAVEMGLGVAILPVSTAQGEVKGGSLVAKPFAEGPVSRPIGLLIRKGKYLDRASAAVLEAFKAAANLPATEEA
>NZ_CP006003.1|WP_046711497.1|1934502_1934796_-|hypothetical-protein
MPSAPPPPPKPSLPRAAALGLAGGLLLGGLGLFAAGLRGLFGTLECTGLSGPECELLQQATHELGRFQSLAGGALVALGSALFVLVRRRPPVPPEAP
>NZ_CP006003.1|WP_046711498.1|1934872_1935970_+|teichoic-acid-biosynthesis-protein
MRILYGVVGEGMGHATRSRVLLEELTKKHEVHIVVSGRAQDYLAKRFQNVHGIWGLTLAYEGNSVKKWQTVLQNLTGAVKGWPQNVRQYFELVDDFKPDVVVSDFESFSYLFARTHRLPVISVDNMQVINRCQHEPSLLAGYEDSFETSRAIVKAKLPGAFHYLVTTFFYPPTRKRRTTLAPSILRPEIIEAKSEPGEHLLVYQTSTTNTALPDILKAAGIPCRVYGLRRDITEDLVDGNLTYRPFSEKGFIDDLRTSRGVVASGGFTLMSEAVYLRKPVLSIPLEGQFEQIINALYLEKLGYGMYVKTLTVDALKEFLSRVPRCQQALQGYEQEGNTKMLTALEEQLALAYEHRGHWAMEMAQD
>NZ_CP006003.1|WP_046711499.1|1935990_1937040_-|NAD(P)-dependent-oxidoreductase
MADWRKNRTATRFTPGTLAAAGIGAALGLRGLLKRPRYSFEGRTVLVTGGSRGLGLVLCRQLVREGARVALCGRDTQSLERALEELEREGGEVLALPCDVRDSVQVEAMVSAVLEHWGAVDVLINNAGTIQVGPMESMTVEDFEDAVDTHLWGPLYTTLAVLPAMKQRREGRIVNIASVGGKISVPHLLPYSASKFALVGLSDGLRAELRQDGILVTTVCPGLMRTGSPLNARFKGQHEAEYAWFSISDSLPGVSVSAERSARLILDGCRRGDAEVVVGAAAKLGAVGRALAPGLTAALLAWANRLLPQSSSQDAHRGVDSETPLTRSWLTELSRRAAERNNNHDVPLH
>NZ_CP006003.1|WP_046711500.1|1937061_1937532_-|TlpA-family-protein-disulfide-reductase
MPTHDIPLTLLDPDGGWINAPVHVSELDELPVLLHFFSLAEDADANDFASLQRFLAEFGPRGLKVIGVDVTHSARELRDTNAVEAFAREHGLVYPIAVDDGSMARAYGVKQTPAWLVFDADGRLRHHLCGQDAARRVRPLLERFTQYDTSAAAPAP
>NZ_CP006003.1|WP_046711501.1|1937694_1938813_+|aminotransferase
MRIPDFKLERYFARWEFAAPYTLCSSDIEGWRMKELLALADSEALGRWEALTLGYTEAPGLPALRDEIARLYPGLSPDEVLTFAGAEEAVFILMNVLLGAGDHAVVTWPGYQSLYEVARATGADVTLLPLREEDGWAFDVEALRRALTPSTKLVVVNFPHNPTGALPDRATFQALCALCDERGIHLLSDEVYRLLEHEASALLPAAVSLSPRAFSLGVMSKAFGLAGLRVGWLACRDVDVLRRCMAYKDYTTICNSAPSEVLSLIALRAKERVLARSRALLASNLALLDAFFARHADTFHWVRPRAGSVAFPRLLREEPVAHFTDALVQREGVLLLPGDVYDFPGNHFRLGLGRTSLPEALSRLERFVSDTR
>NZ_CP006003.1|WP_046711502.1|1938981_1939866_+|hypothetical-protein
MKKLMGTAVAAATLLFGTQAFATDYTLWIHGRNGGTTQAGNYADFSYWGPANTAAGVNKKAVNWNGKERIGGQNARIRDALDCFCTGDNWCYIAVHSAGDLQIGYALAMYGTSQRTKKNASPNASGVCGNKDGTTQSGWNIRSVRVASGAGGGSELADLGEWAVSEPLVSDLVTTTARTMYNHNVTADVKFYMYAASKGTLYSGLLPGQDDEAVAYHSTGGVSGNAGSSLCNPGDWFCGGTLTTGTGKTSNGLAKWLNHDVKLRDDGESFNHYANGSWGGIVAKVREAVVAEAK
>NZ_CP006003.1|WP_046711503.1|1939888_1941193_+|hypothetical-protein
MMPARPESARVSLPRRLGWGFVVIALALGGAAWWRWSVRSGQGDAGVASASSQAAWRGSPAGPGARMERIGDGVGLAQGPSPNAQGTHVSVVNLEQRERLARREMWAERLARAKETLESYVASTRYPPQSRSIRDHPDQVVLAEPERTRPLSREHTDVQLRLKQDRVFVVGDEVVLFSVSCEDAHRAPRPCEVLSATAREADHMPGAGGMPAVPVAFTDDGAAGDALAGDGVFTGRFQPSKQGFPLYSGTLRVDAQVRSGRAEGSAFLDILYTPTPPAVLTGKVREVVEDGSLSLYLGIEVRKAGRYVVAGRLDDERGEPFAHVSFNEELKEGAREVKLSVFGKLVLDDAPTFPLQLRDVEGFLLKESGDPDRELMATQRGYLHTTQVYPSSVFSPSEWQGEQRLRYIDEYQRQVDEAQRQYDSTFEEPSEKRP
>NZ_CP006003.1|WP_046717515.1|1942669_1943413_+|serine/threonine-protein-phosphatase
MRFESAGQTHIGRRPHNEDSYCVLPELGLYVVADGLGGQEGGEVASRCVVDTFAGLGQRWEREHEAAWPEVADPRRTREENLLAACSQLAQANLRAQRVGRLAEMASTVVALAVGRDGAAVVHVGDSRLYRLRGGQLEPLTRDHSFIEELRDVGMEPPGGASNWRHLITRALGTDNAEPTLQRLHAQSGDVFLLCSDGLYEPLGLEGLTRRLCLSSAREVCDALVADAFEAGGKDNITAVVLRVADA

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Crispr_ID: NZ_CP006003_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP006003_10

2251109-2251256

Orphan

Consensus_repeat	Method
GCATCGGGCCTCCGTCAGGAAGGCGTCCAGGTGGGCCTGGACGCGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP006003_10

>merge|NZ_CP006003|10|2251109-2251256|CRISPRCasFinder
GCATCGGGCCTCCGTCAGGAAGGCGTCCAGGTGGGCCTGGACGCGCCGTCCACAGCCGCGTCATCCCTGTCTCCAGGAAGCGCATCGGGGGATTCATCCGTTGCATCGGGCCTCCGTCAGGAAGGCGTCCAGGTGCGCCTGGACGCGC

>NZ_CP006003|10|10|2251109-2251256|CRISPRCasFinder
GCATCGGGCCTCCGTCAGGAAGGCGTCCAGGTGGGCCTGGACGCGC	CGTCCACAGCCGCGTCATCCCTGTCTCCAGGAAGCGCATCGGGGGATTCATCCGTT
GCATCGGGCCTCCGTCAGGAAGGCGTCCAGGTGCGCCTGGACGCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP006003.1\|WP_046711714.1\|2259154_2259862_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046711706.1\|2244766_2245243_-\|DNA-starvation/stationary-phase-protection-protein-Dps	unknown	unknown	gnl\|CDD\|236521
NZ_CP006003.1\|WP_046711702.1\|2241280_2241874_+\|methyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|237007
NZ_CP006003.1\|WP_046717563.1\|2262101_2263532_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_082165007.1\|2243779_2244568_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046711707.1\|2245373_2245898_-\|alkyl-hydroperoxide-reductase	unknown	unknown	gnl\|CDD\|129859
NZ_CP006003.1\|WP_046717560.1\|2252807_2253755_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226651
NZ_CP006003.1\|WP_046711701.1\|2239868_2241284_+\|amino-acid-permease	unknown	unknown	gnl\|CDD\|273332
NZ_CP006003.1\|WP_046711704.1\|2242469_2243732_-\|pyridoxal-phosphate-dependent-aminotransferase	unknown	unknown	gnl\|CDD\|223513
NZ_CP006003.1\|WP_046711709.1\|2246837_2249978_-\|multidrug-efflux-RND-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|273335
NZ_CP006003.1\|WP_046717562.1\|2258535_2259114_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|380375
NZ_CP006003.1\|WP_046711703.1\|2241995_2242400_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046711716.1\|2260907_2261975_+\|alkene-reductase	unknown	unknown	gnl\|CDD\|239243
NZ_CP006003.1\|WP_046711713.1\|2257356_2258187_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NZ_CP006003.1\|WP_046711711.1\|2254007_2254646_-\|glutathione-S-transferase-family-protein	unknown	unknown	gnl\|CDD\|223698
NZ_CP006003.1\|WP_046711710.1\|2249979_2251071_-\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|273776
NZ_CP006003.1\|WP_046711708.1\|2245904_2246459_-\|peroxiredoxin	unknown	unknown	gnl\|CDD\|239313
NZ_CP006003.1\|WP_052770825.1\|2254706_2256050_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|200169
NZ_CP006003.1\|WP_046711712.1\|2256249_2257053_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046711715.1\|2259939_2260842_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176114

Protein	Function_ID	Function_description	E-value
NZ_CP006003.1\|WP_046711706.1\|2244766_2245243_-\|DNA-starvation/stationary-phase-protection-protein-Dps	gnl\|CDD\|236521	PRK09448, PRK09448, DNA starvation/stationary phase protection protein Dps; Provisional.	1.25503e-50
NZ_CP006003.1\|WP_046711711.1\|2254007_2254646_-\|glutathione-S-transferase-family-protein	gnl\|CDD\|223698	COG0625, Gst, Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones].	1.94113e-41
NZ_CP006003.1\|WP_046711707.1\|2245373_2245898_-\|alkyl-hydroperoxide-reductase	gnl\|CDD\|129859	TIGR00777, AhpD_protein., alkylhydroperoxidase, AhpD family. Members of this family are alkylhydroperoxidases, which catalyze the reduction of peroxides to their corresponding alcohols via oxidation of cysteine residues. In these alkylhydroperoxidases, the cysteines are located in a conserved -CXXC- motif located towards the COOH terminus. In Mycobacterium tuberculosis, two non-homologous alkylhydroperoxidases, AhpD and AhpC, are found in the same operon. [Cellular processes, Detoxification].	5.01879e-41
NZ_CP006003.1\|WP_046717560.1\|2252807_2253755_-\|hypothetical-protein	gnl\|CDD\|226651	COG4188, COG4188, Predicted dienelactone hydrolase [General function prediction only].	1.99024e-41
NZ_CP006003.1\|WP_046711701.1\|2239868_2241284_+\|amino-acid-permease	gnl\|CDD\|273332	TIGR00911, High-affinity_methionine_permease, L-type amino acid transporter. [Transport and binding proteins, Amino acids, peptides and amines].	6.93295e-57
NZ_CP006003.1\|WP_046711704.1\|2242469_2243732_-\|pyridoxal-phosphate-dependent-aminotransferase	gnl\|CDD\|223513	COG0436, COG0436, Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism].	1.56435e-59
NZ_CP006003.1\|WP_046711709.1\|2246837_2249978_-\|multidrug-efflux-RND-transporter-permease-subunit	gnl\|CDD\|273335	TIGR00915, Probable_aminoglycoside_efflux_pump, The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family. Proteins scoring above the trusted cutoff (1000) form a tight clade within the RND (Resistance-Nodulation-Cell Division) superfamily. Proteins scoring greater than the noise cutoff (100) appear to form a larger clade, cleanly separated from more distant homologs that include cadmium/zinc/cobalt resistance transporters. This family is one of several subfamilies within the scope of pfam00873. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Unknown substrate].	0
NZ_CP006003.1\|WP_046717562.1\|2258535_2259114_+\|hypothetical-protein	gnl\|CDD\|380375	cd02910, cupin_Yhhw_N, Escherichia coli YhhW and YhaK and related proteins, pirin-like bicupin, N-terminal cupin domain. This family includes the N-terminal cupin domains of YhhW and YhaK, Escherichia coli pirin-like proteins with unknown function. YhhW is structurally similar not only to human pirin but also to quercitin 2,3-dioxygenase (quercitinase). Although the function of YhhW is not completely understood, YhhW and its human ortholog have quercitinase activity and are likely to play an important role in transcription and apoptosis. This N-terminal cupin domain of YhhW has a metal coordination site and is thought to have catalytic activity while the C-terminal cupin-like domain has diverged considerably and has closer alignment with C-terminal pirin. YhaK is found in low abundance in the cytosol of E. coli and is strongly up-regulated by nitroso-glutathione (GSNO). There are major structural differences at the N-terminus of YhaK compared with YhhW; YhaK lacks the canonical cupin metal-binding residues of pirins and may be involved in chloride binding and/or sensing of oxidative stress in enterobacteria. YhaK showed no quercetinase and peroxidase activity; however, reduced YhaK was very sensitive to reactive oxygen species (ROS). Proteins in this family belong to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold.	8.2073e-27
NZ_CP006003.1\|WP_046711708.1\|2245904_2246459_-\|peroxiredoxin	gnl\|CDD\|239313	cd03015, PRX_Typ2cys, Peroxiredoxin (PRX) family, Typical 2-Cys PRX subfamily; PRXs are thiol-specific antioxidant (TSA) proteins, which confer a protective role in cells through its peroxidase activity by reducing hydrogen peroxide, peroxynitrite, and organic hydroperoxides. The functional unit of typical 2-cys PRX is a homodimer. A unique intermolecular redox-active disulfide center is utilized for its activity. Upon reaction with peroxides, its peroxidatic cysteine is oxidized into a sulfenic acid intermediate which is resolved by bonding with the resolving cysteine from the other subunit of the homodimer. This intermolecular disulfide bond is then reduced by thioredoxin, tryparedoxin or AhpF. Typical 2-cys PRXs, like 1-cys PRXs, form decamers which are stabilized by reduction of the active site cysteine. Typical 2-cys PRX interacts through beta strands at one edge of the monomer (B-type interface) to form the functional homodimer, and uses an A-type interface (similar to the dimeric interface in atypical 2-cys PRX and PRX5) at the opposite end of the monomer to form the stable decameric (pentamer of dimers) structure.	1.67246e-95
NZ_CP006003.1\|WP_046711716.1\|2260907_2261975_+\|alkene-reductase	gnl\|CDD\|239243	cd02933, OYE_like_FMN, Old yellow enzyme (OYE)-like FMN binding domain. OYE was the first flavin-dependent enzyme identified, however its true physiological role remains elusive to this day. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Members of OYE family include 12-oxophytodienoate reductase, pentaerythritol tetranitrate reductase, morphinone reductase, and related enzymes.	4.15435e-172
NZ_CP006003.1\|WP_046711713.1\|2257356_2258187_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	6.05337e-19
NZ_CP006003.1\|WP_046711702.1\|2241280_2241874_+\|methyltransferase-domain-containing-protein	gnl\|CDD\|237007	PRK11873, arsM, arsenite methyltransferase.	7.97222e-15
NZ_CP006003.1\|WP_046711710.1\|2249979_2251071_-\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	6.05578e-62
NZ_CP006003.1\|WP_052770825.1\|2254706_2256050_-\|hypothetical-protein	gnl\|CDD\|200169	TIGR02232, myxo_disulf_rpt, Myxococcus cysteine-rich repeat. This model represents a sequence region shared between several proteins of Myxococcus xanthus DK 1622 and some eukaryotic proteins that include human pappalysin-1 (SP\|Q13219). The region of about 40 amino acids contains several conserved Cys residues presumed to form disulfide bonds. The region appears in up to 13 repeats in Myxococcus.	8.26224e-11
NZ_CP006003.1\|WP_046711715.1\|2259939_2260842_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176114	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain. This CD includes the substrate binding domain of LysR-type transcriptional regulator (LTTR) CrgA and its related homologs. The LTTRs are acting as both auto-repressors and activators of target promoters, controlling operons involved in a wide variety of cellular processes such as amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to name a few. In contrast to the tetrameric form of other LTTRs, CrgA from Neisseria meningitides assembles into an octameric ring, which can bind up to four 63-bp DNA oligonucleotides. Phylogenetic cluster analysis further showed that the CrgA-like regulators form a subclass of the LTTRs that function as octamers. The CrgA is an auto-repressor of its own gene and activates the expression of the mdaB gene which coding for an NADPH-quinone reductase and that its action is increased by MBL (alpha-methylene-gamma-butyrolactone), an inducer of NADPH-quinone oxidoreductase. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.01465e-63

>NZ_CP006003.1|WP_046711710.1|2249979_2251071_-|efflux-RND-transporter-periplasmic-adaptor-subunit
MNRLWSVTLLLMLGCSGKKAAPAAPEPREIDVVTVAPREVRDTGEYLGSLLSRQSVTVLPRVDGYVRRIHVRPGQHVESGAPLLEVDARVETAALDGAQAQLSSARVDLELARRTLTRTQTLRQEGLASAQELESAQARVDSAEATARASSAQVTQRQVQLQFHVIRAPFAGTVDDVLVREGDFVTASTPLTRVAQAEILEVSVSVPSPRARSLRPDTMMEVLDAKGTVLLTSPLFFVAPQADPRTQLVEVKAAFQNTHGLRPSELVRARLVYSVRDALQIPALAVVRQSGQPFALVVREKDGATVVERRPITLGALGERSYVVEHGLEPGERVAVSFLQALRDGAPVKVKTLLHTAARMTGR
>NZ_CP006003.1|WP_046711709.1|2246837_2249978_-|multidrug-efflux-RND-transporter-permease-subunit
MFIDFFIRRPVFAIVCSILLTLVGLIAIPTLPIAQYPDLAPPQVTVSATYVGASAEVVESAVTIPLEQELNGVEGMRYISSTSGNDGTSNVTITFEATRDIEVAAVDVQNRVSRAAARLPAQVNQTGIVVNKASSQILLSVALYSPDDRYDAKFLSNYADVNLKDAIKRVRGVGDVRIFGERKFSMRVWLDPTELARRKLTPLDVTRALQEQNLQVAAGQVGQPPSEEDQPYQLAVRARGRLIEPEEFGDIVLMRDASGKAVRMKDVARVELGAENYSTLLRFSGKQAVGIATFQLPTANALEVRDAVLAELQRLSAQFPPGMEYQTGTDTTLAVRATLREVVRTLVEAIVLVILVIFLFLHGWRSVLITALTLPVSLVGTFAFVKLLDFSINTLTLFGLTLATGLVVDDAIVVIENIERLMLERKLTAPQAARAGMKEVSGAVIAISIVLVAVFLPVALFPGTTGAIYRQFALTIAASVALSTFCALTLTPALAARMLSSHTGDKWVFFRHVDRVLDRTRHLYGRALRRLLAHPALILGAFLLCVVATGALVVITPTGFIPDEDQGYLLVTVQGPEGTSLSQTQKVMAQVEQVLLAQPEVRAIFANGGMSPQGTGSNMANIFVPLKPWDERTGPEQSVAALVERLRAPLSRIGGARVVPFQPPAIRGVGAVGGFQFVVEDTAGESSLDQLASAAQQLMAQGNDDGRLRGVFTGFNADTPLLDVEVDRQLAKAVGVPIDQIFSTLQVYMGSQYINDFNYANRAYRVYVQAEQQFRDSPADIAAFYVRSDTGDMIPLESLVKVQPTLSAQLIRHHNLFRAVELSGQAAPGVSSGQAMEAMEELAARHLPQGMSAEWTGISLEQKQSGGQSLLIFGLGLLFVFLVLAAQYESFSLPFVIILSVPLAILGALGLQLLRGQANDVFCQLGLVMLVGLASKNAILIVEFAEQLRAQGRSITDAVVEAAEVRLRPILMTSTAFLLGVVPMMTASGAGAGARNSLGTAVFGGMLVSTVVNFVFIPGLYVLVQKLRGEARLPAPDARAVATPSH
>NZ_CP006003.1|WP_046711708.1|2245904_2246459_-|peroxiredoxin
MLTVGDKIPSFKVKATVSLEKGKEFQEITNETFKGKWLVLFAWPKDFTFICPTEIAEFGKKNKDFADRDAQVLGLSTDSEFVHHAWRTHHPDLKNLPFPMLADLKHELCNALGILHKEEGVALRATFIADPEGIIRHVTVNDLSVGRNVSETVRTLDALQTDELCPCNWSKGEETLTQKLAKAG
>NZ_CP006003.1|WP_046711707.1|2245373_2245898_-|alkyl-hydroperoxide-reductase
MASLEVVRAELTDSHKDTRLNLQAVLEGGSLTPEQRWGVAVACAFAVRNERLKEAMLNEARKALANPDPVIEDARAAASLMAMNNVYYRFRHMIGKESYSTKRAGLRMNRLAQVLTNKVDFELVCLAVSAINGCEMCMQSHEKVVLEGGLSEDQVHDAVRVAAVIHAAAVGLES
>NZ_CP006003.1|WP_046711706.1|2244766_2245243_-|DNA-starvation/stationary-phase-protection-protein-Dps
MYRSPSPLPEKTRASVVESLNARLADGLDLHSQIKVAHWNIKGPQFAALHPLFETFAVSLANHNDSIAERAVTLGGKAYGTTRHVGKASRLPEYPQETTKDLEHVKLLAERIEVYLDGLRESRKLFVEVDDADSEDLATGIIVEFEKHAWFLRASLES
>NZ_CP006003.1|WP_082165007.1|2243779_2244568_-|hypothetical-protein
MSVVVALLSGCGGEPPEELVQSAKAKVERAAAVGHLTRGALEVLGLMPVYTCGEPRRGFLDIATVDLSQRLACATTTVESLDAVTDGVVVTFSGPDCQVHGLGLSGRVFFKYRGGEDRMEVEADLRQLRVEGVVLPAEVGYGTCGDLTSVWVKAEGDIPGREGHTMRMDAKVTKRPGMPILGGSSLLLDGTGELSGPDGVDKLTLTTLQYEVGEYLPKEGMAVLETSDGHHVEASFKPVLWRVGKVELTVDDHSPVTVPIVR
>NZ_CP006003.1|WP_046711704.1|2242469_2243732_-|pyridoxal-phosphate-dependent-aminotransferase
MSDDVTIPAFRSVPRTGVIYVTAEATRRGYRSSDPDWCNLGQGQPETGDLPGAPARLGSVNIDVADMEYAPVAGLWDVREAIAGLYNRLYRKGMPGQYSAENVCLSGGGRAALTRAAASLGSVNLGHFLPDYTAYEELLDVFKAFTAIPILLEGERGYAFTHEDLRREVQGRGLSALLFSNPCNPTGKLVQGDELARWVGVAREQECTLLIDEFYSHYVWTGRPGHLPVESAARYVEDVNRDPIVLFDGFTKNWRYPGWRMTWTVGPKQVIEAVSSAGSFLDGGGSRPLQRAAIPLLQEEPVIAETMAIHNTFREKRDRFHSRLERLGIRTDRAPDGTFYVWGNVSGLPAPLNDGMGFFRAALEEKIITVPGEFFDVNPGKRRARPSRFRSYVRLSFGPSMEVLEKALTRLEAMVLKHSR
>NZ_CP006003.1|WP_046711703.1|2241995_2242400_+|hypothetical-protein
MGLPERRAIAQYRQNVFPKWQQKLSELVGAPVEIEVEWDTLGADGLAHLFEQGIDAIYFEPLVLALQDIGVDDFSKQAIRDGFKKYIISGIEPDDRIFYRFENKTLSYRHNFSNIENYTNERRQRLVQLLEKGL
>NZ_CP006003.1|WP_046711702.1|2241280_2241874_+|methyltransferase-domain-containing-protein
MKTSSVLVLMLAVGPGITWAQEAAPPPSSAPGFSANAPEVPYVPTPEPTVEGMLSLAGVKPGDVVYDLGSGDGRIVISAVRNHGASRAVGVDINPERVKEAQDNARRAGVEDQVEFRQGDLFDADLSGATVVTLYLLPTVNERLKPKLLAELKPGTRIVSHGFDMGDWAPEKQTQVDGRTVYLWVVPEPGAEPPAAR
>NZ_CP006003.1|WP_046711701.1|2239868_2241284_+|amino-acid-permease
MREQPASREQSTPGAARPLPSLRVLDVVALTVGVVLGAGIFKAPSLVAEQSASGAQMLLAWGLGGVASLVGALCYAELASAWPHPGGDYHYLYRALGRGPAFLFAWARLTIIPTGSIALLAFVFGDYASQLFSLGPASSSLYAAAMVVGLTAVNVAGVRQGTRTQNLLTLLEVLGVLAVILAGLVLAPPAAQTATTVPAAPSGTSWGLAMVFVLLTYGGWNEVAYLSAEMKRSRRGLAWALLVSIGVVTLLYLLVNLAYLRGLGLEGMAASEAVAADVMQRALGSPGAVVLSILIALSALTSANATVLTGARTQYAFGKDSLLFNGLGQWHARANTPTRALLVQGAISLALVGLGALTRQGFQTMVEYTAPVFWLFFLLTGVSLLVLRVREPDAPRPFRVPLYPLTPLLFIAVCGYVLYSSLAYTGLGAVAGLVVLAVGGVLLAVEVARGRRSPRGVGMRSRPFDSPKEAT
>NZ_CP006003.1|WP_046717560.1|2252807_2253755_-|hypothetical-protein
MGVTSLSYTDAARQRVLKTVVWYPAAEGSRMEEHPASPIFVPFVAAKDAPVSTTHARWPLIVLSHGNGGAAINMSWFGAHLAAHGFIVMSVDHPGNTYGDTSPEGYVRGWERPRDFTALLDAVSKDAVWGPRVDAGRIGAAGHSMGGYTALALAGARLNLSPIMQGCTAPETREHPGCDELRDVDYSRIDLAVARASYKDARVRAAFSMAPGMAGSYEARDVADIDVPVALVLAQGDELMPHEHNGMHLAKLLPSATTVVLEDAAHFTFLPRCTELGFKVAEVLCRDATPGTRGASQARTLSEAVSFFRRTLGGD
>NZ_CP006003.1|WP_046711711.1|2254007_2254646_-|glutathione-S-transferase-family-protein
MKLYFHPMSGNSRRVLLVAAHLDVPLERVMVDLPKGEQRATSHLGRNPNGLVPVLDDDGFLLWESRAIMQYLVELTPGQTLLPTEARGRADVSRWLFWCSAHMAPACTILVQENFVKALTGRGPPDPAEVSRGEALFAKYARLLDEHLRGKTWVSQERLTLADFSLAAGFALAGPARLPLGDFPNVRAWLGRVQELEAWKRTAPTLPLPARG
>NZ_CP006003.1|WP_052770825.1|2254706_2256050_-|hypothetical-protein
MLNERKTFLSRGWGAACVLALLSACSGGLEPLSGDEALTDLDPGGSDSSVLTSLAPEPSYAHAVDSSSTAGVLEPERALGPPDGQAAMVLNLPGAVLVLDMGEGTEGTGDLNVSYRNATLEVLTWVEFLRADKSVITTGPLRLANLGLGTHVAVVPYSEKPVPYRYVRMTGVLALYWVDAVRNMGSGGLTCGDGQLNEGETCDDANRTSGDGCSRGCQQEAGFRCEGTPSACTDIDECAEGLGNCAAGFSCINKPGSFFCWEGVCRPPHSVCNNQCFNLSTDKENCGRCGNRCGWRDVCARGVCKTIGKLAFTLSWSRPGNGDLIVRAPGGIHYSAQNPGPEGEELFVFDDQDGKGPEVVYWAPGVEPDLGDYNICFEAKSFDPAPSHDHPVSASATYLGPWNGTTQLGSTTLTSHSRGGMECGRPTIGFVGRMTYWGRFAPESSGP
>NZ_CP006003.1|WP_046711712.1|2256249_2257053_-|hypothetical-protein
MRFRPSVSATEQAMRSLILWTLLLFATEALATETRLVVRARARDGKFVGTSMGGVQVVLRDARTGQVLTQGVTAGSTGNTQTLMKQPQVRGAPLADEASAKYTATVDLSEPTLVTVEVSGPLAQRQALATSTTQLWLLPGKHVEGDGLVLELPGFVVDVVTPSAQEFIKLPSDKKLTVPLRANLVLMCGCSTEPKGLWDSNRYELLASVKHNGKPLSQVPLKFAGKTSTYEAALSVQQSGVYEVTVTAFDPATGNSGVDSTTFVVEQ
>NZ_CP006003.1|WP_046711713.1|2257356_2258187_-|LysR-family-transcriptional-regulator
MHISWDEIQTLEALVRTGGIEAAGRELSLRHSSVSRRIAALEARLGTALFARGARLVPGPLTLRIAERAATMRGAAQDIEGFLGSERRGRERTVVVTTSDVLAPLLFRALAKARPAQAVEVLVSDDELELLPGQVDLALRPGQNPSGSLRGRRLGRLKVGVYRAKGGAPDWLQPSAELRAKASMRWWREVPGDSPGAVTCNSLLAMRDACCVGLGRAALPSFLAHGDARLQLERELEGGPPLWLLAPMARGVPKALRETQGAIFTALRSTEDAFAE
>NZ_CP006003.1|WP_046717562.1|2258535_2259114_+|hypothetical-protein
MGPLLVLADATFAPKSRFPLHPHEEMEILSIVVDGTLSHHGDQAHGATMGPRTAQLISARDGMVHAEGNDTDSPTRMLQLWFRPNSHGGPPVYSSRDFSGGGRQLIAGDEGMSLRADVKVWWLPLTAGPSERLTIGRGRRGYLLATTGPVRVEAVGGGSGVDLALGEGAELGEGEVQLRASAGSAAIFIDVA
>NZ_CP006003.1|WP_046711714.1|2259154_2259862_+|hypothetical-protein
MFPDLATRVVPLDELKARFAAANEAETFGWFVQNFEHIQERAEQHDKPVPEIHLVTGPVRLEKLVPESPWILVVDGDLEVAGDIDLSTSPYDISLFVVFGEVRARNLRFSGSACCYVTKSVELTGGCFGDHGDESAELHTARLKARVVMLDGHTGVNATELDAVVCAGEGWGLPLHFTSKDVASEFFVPEALDGDGYHEESVWELMANGKDPFLPGAWEKLRARRVEAEDRLKPL
>NZ_CP006003.1|WP_046711715.1|2259939_2260842_-|LysR-family-transcriptional-regulator
MRTVDPNGIIAFLEVVERGSFRGAARALALPKSTVSQRVAVLEEQLGVQLLLRTTRTVMLTDIGASYQREVAPAVAALRDAAALVNELQAHPSGRLRMSAPVELGQRLMGGVLAAFAERYPQVKLELELTDREVNMVEEGHDLSIRVGPLRDSQLIARKLGVPAHVGIFGSAAYLKKAGRPKHPRELSAHRCLSMGSSTSPMTWAFSGTRPVSIRPVIAVNSFQVLCALAAAGAGLARLPRAQANTRALVEVLEPFAPAPHQAFAVYPAARHPSAALRAMLTVLGETFGSCEAAVRGGEL
>NZ_CP006003.1|WP_046711716.1|2260907_2261975_+|alkene-reductase
MALFTPYGLGRITLSNRVVMAPMSRSRAIGGTPNALMRDYYRQRAEAGLIITEGTSPSPNGLGFAREAGIYSREQVAGWREVTDAVHEAGGHIFVQVMHCGRVGHVLNLPPGARLVAPGVVPAKGDIFTDAQGPRPISTPEAMTAQDVAQVRREFVQAARNAIDAGFDGIELHGANGFLFEQFFNPHLNHRTDAHGGSLENRARLLVEVAHDCAEAIGADRVGVRLSPYNTHVDMPLYDDIHALYTHVAGRLRGLVYVHVVGNSHEALPTTVKELRAAFGGTLIANRGFTTQSAQAALASGQAELVAFGSPFIANPDFVTRARAGLPLAEIRKELLHASGAEGYTDYPRSTSSTM
>NZ_CP006003.1|WP_046717563.1|2262101_2263532_+|hypothetical-protein
MEASMRWSGVMLGLLGFVGCAGPTRGIATQYNPETGQYEVPAEELVYQVPVEDAMMTARHILETGRFDVLEKEGGLEMFSSFIPDITPPERFYIKGERHGPRQSVVRIFRLRYVHDPAFASEVRGTPSRQVDVIADFKGLPGLEGYRPAQGLRDMGVEQRLLAALEMAPALELVGGNPPLPMRSVVMEGGSEEERAPVAPPACGAPVEGASSLFTAGGVLLVADPLGTQELPSMALRMLCEATSRELPVTLALSIPDVEQPLLERYLGSSGDSSAMQELLSGSAFWRRVYQDGRSSRAMLRLVEQARRLRVSGKDVAVVAIDSDKAHGNEREAWMAQVLLKAQAKRPQAWTLVLTGSVHARTTQVSWDGDLEPMGARVAKALPSVRALDVGFRRGTQYVCRYSVWEEDVECNVFGISPSLEARQATAQDAGLKLYPAQQPDGFSGRLYVGALTASHPPLQAPPRPEPVKAPVPATK

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Crispr_ID: NZ_CP006003_11

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP006003_11

2415114-2415300

Orphan

Consensus_repeat	Method
CGTGCGTGGCATGCCCGCTGACGGACGATTCGGGTCCGTCGCCCGCGTATC	PILER-CR

2 spacers

WYL

The CRISPR arrays of NZ_CP006003_11

>merge|NZ_CP006003|11|2415114-2415300|PILER-CR
CGTGAGATGCCCGCTGACGGACGGCTCTGGTTCGTCGCTTGCGTGTCCTCGCACGAGGGCGTCACGTGCGTGGCCCCCTCGCTGACGGACGATTCGGGTCCGTGGCCTGTGTATCCCGTGCGAGCGCGGCTCGCGCGTGGGTGGCGTGCCCGCTGACGGACGATTCGGGTCGGTCGCCCGCGTGTCT

>NZ_CP006003|11|1|2415114-2415300|PILER-CR
CGTGAGATGCCCGCTGACGGACGGCTCTGGTTCGTCGCTTGCGTGTCCTCGCA	CGAGGGCGTCACGTGCGTGGCCCCC
TCGCTGACGGACGATTCGGGTCCGTGGCCTGTGTATCCCGTGCGAGCGCGGCT	CGCGCGTGGGTGGCGTGCCC
GCTGACGGACGATTCGGGTCGGTCGCCCGCGTGTCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP006003.1\|WP_046711802.1\|2421101_2422010_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379719
NZ_CP006003.1\|WP_046711792.1\|2400958_2401834_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213231
NZ_CP006003.1\|WP_082165576.1\|2410598_2411237_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225415
NZ_CP006003.1\|WP_046711808.1\|2427478_2428273_-\|dioxygenase	unknown	unknown	gnl\|CDD\|239540
NZ_CP006003.1\|WP_046711805.1\|2424237_2425284_+\|sensor-protein-lytS	unknown	unknown	gnl\|CDD\|225814
NZ_CP006003.1\|WP_046711791.1\|2400663_2400870_+\|cold-shock-protein	unknown	unknown	gnl\|CDD\|224197
NZ_CP006003.1\|WP_046717587.1\|2408036_2410475_+\|DNA-polymerase-II	unknown	unknown	gnl\|CDD\|99921
NZ_CP006003.1\|WP_046711799.1\|2414652_2415054_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP006003.1\|WP_046711806.1\|2425280_2426066_+\|DNA-binding-response-regulator	unknown	unknown	gnl\|CDD\|225818
NZ_CP006003.1\|WP_046711804.1\|2423521_2424169_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046711794.1\|2405509_2407186_-\|long-chain-fatty-acid--CoA-ligase	unknown	unknown	gnl\|CDD\|235923
NZ_CP006003.1\|WP_082165028.1\|2418961_2421061_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|211418
NZ_CP006003.1\|WP_046711793.1\|2401846_2405440_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|341067
NZ_CP006003.1\|WP_046711807.1\|2426178_2427156_+\|Xaa-Pro-aminopeptidase-like-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046711795.1\|2407335_2407980_-\|DNA-binding-protein	WYL	COG2378_WYL_CAS-I:CAS-III	gnl\|CDD\|225253
NZ_CP006003.1\|WP_046711797.1\|2411300_2411795_+\|nuclear-transport-factor-2-family-protein	unknown	unknown	gnl\|CDD\|379275
NZ_CP006003.1\|WP_046717588.1\|2418215_2418824_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046711798.1\|2411916_2414574_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_082165029.1\|2422017_2423586_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227511
NZ_CP006003.1\|WP_046711800.1\|2415373_2417071_+\|dihydroxyacetone-kinase-subunit-DhaK	unknown	unknown	gnl\|CDD\|237723

Protein	Function_ID	Function_description	E-value
NZ_CP006003.1\|WP_046711802.1\|2421101_2422010_+\|hypothetical-protein	gnl\|CDD\|379719	pfam14903, WG_beta_rep, WG containing repeat. This repeat contains an N-terminal WG repeat motif. The extent of the repeat is poorly defined. This repeat may form a beta solenoid structure (Bateman A pers. obs.).	7.1854e-08
NZ_CP006003.1\|WP_046711792.1\|2400958_2401834_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213231	cd03264, ABC_drug_resistance_like, ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.	5.08124e-103
NZ_CP006003.1\|WP_082165576.1\|2410598_2411237_+\|hypothetical-protein	gnl\|CDD\|225415	COG2860, COG2860, Predicted membrane protein [Function unknown].	8.15607e-46
NZ_CP006003.1\|WP_046711805.1\|2424237_2425284_+\|sensor-protein-lytS	gnl\|CDD\|225814	COG3275, LytS, Putative regulator of cell autolysis [Signal transduction mechanisms].	3.21997e-52
NZ_CP006003.1\|WP_046711791.1\|2400663_2400870_+\|cold-shock-protein	gnl\|CDD\|224197	COG1278, CspC, Cold shock proteins [Transcription].	1.05227e-34
NZ_CP006003.1\|WP_046717587.1\|2408036_2410475_+\|DNA-polymerase-II	gnl\|CDD\|99921	cd05538, POLBc_Pol_II_B, DNA polymerase type-II B subfamily catalytic domain. Bacteria contain five DNA polymerases (I, II, III, IV and V). DNA polymerase II (Pol II) is a prototype for the B-family of polymerases. The role of Pol II in a variety of cellular activities, such as repair of DNA damaged by UV irradiation or oxidation has been proved by genetic studies. DNA polymerase III is the main enzyme responsible for replication of the bacterial chromosome; however, In vivo studies have also shown that Pol II is able to participate in chromosomal DNA replication with larger role in lagging-strand replication.	1.68892e-110
NZ_CP006003.1\|WP_046711799.1\|2414652_2415054_+\|hypothetical-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	0.000169728
NZ_CP006003.1\|WP_046711806.1\|2425280_2426066_+\|DNA-binding-response-regulator	gnl\|CDD\|225818	COG3279, LytT, Response regulator of the LytR/AlgR family [Transcription / Signal transduction mechanisms].	2.53301e-57
NZ_CP006003.1\|WP_046711808.1\|2427478_2428273_-\|dioxygenase	gnl\|CDD\|239540	cd03457, intradiol_dioxygenase_like, Intradiol dioxygenase supgroup. Intradiol dioxygenases catalyze the critical ring-cleavage step in the conversion of catecholate derivatives to citric acid cycle intermediates. They break the catechol C1-C2 bond and utilize Fe3+, as opposed to the extradiol-cleaving enzymes which break the C2-C3 or C1-C6 bond and utilize Fe2+ and Mn+. The family contains catechol 1,2-dioxygenases and protocatechuate 3,4-dioxygenases. The specific function of this subgroup is unknown.	1.04536e-63
NZ_CP006003.1\|WP_046711794.1\|2405509_2407186_-\|long-chain-fatty-acid--CoA-ligase	gnl\|CDD\|235923	PRK07059, PRK07059, Long-chain-fatty-acid--CoA ligase; Validated.	0
NZ_CP006003.1\|WP_082165028.1\|2418961_2421061_+\|hypothetical-protein	gnl\|CDD\|211418	cd11577, GH71, Glycoside hydrolase family 71. This family of glycoside hydrolases 71 (following the CAZY nomenclature) function as alpha-1,3-glucanases (mutanases, EC 3.2.1.59). They appear to have an endo-hydrolytic mode of enzymatic activity and bacterial members are investigated as candidates for the development of dental caries treatments.The member from fission yeast, endo-alpha-1,3-glucanase Agn1p, plays a vital role in daughter cell separation, while Agn2p has been associated with endolysis of the ascus wall.	3.04146e-36
NZ_CP006003.1\|WP_046711793.1\|2401846_2405440_+\|hypothetical-protein	gnl\|CDD\|341067	cd09604, M1_APN_like, Peptidase M1 family similar to aminopeptidase N catalytic domain. This family contains bacterial M1 peptidases with smilarity to the catalytic domain of aminopeptidase N (APN; CD13; alanyl aminopeptidase; EC 3.4.11.2), a type II integral membrane protease belonging to the M1 gluzincin family. APN preferentially cleaves neutral amino acids from the N-terminus of oligopeptides and, in higher eukaryotes, is present in a variety of human tissues and cell types (leukocyte, fibroblast, endothelial and epithelial cells). APN expression is dysregulated in inflammatory diseases such as chronic pain, rheumatoid arthritis, multiple sclerosis, systemic sclerosis, systemic lupus erythematosus, polymyositis/dermatomyosytis and pulmonary sarcoidosis, and is enhanced in tumor cells such as melanoma, renal, prostate, pancreas, colon, gastric and thyroid cancers. It is predominantly expressed on stem cells and on cells of the granulocytic and monocytic lineages at distinct stages of differentiation, thus considered a marker of differentiation. Thus, APN inhibition may lead to the development of anti-cancer and anti-inflammatory drugs. APNs are also present in many pathogenic bacteria and represent potential drug targets. Some APNs have been used commercially, such as one from Lactococcus lactis used in the food industry. APN also serves as a receptor for coronaviruses, although the virus receptor interaction site seems to be distinct from the enzymatic site and aminopeptidase activity is not necessary for viral infection. APNs have also been extensively studied as putative Cry toxin receptors. Cry1 proteins are pore-forming toxins that bind to the midgut epithelial cell membrane of susceptible insect larvae, causing extensive damage. Several different toxins, including Cry1Aa, Cry1Ab, Cry1Ac, Cry1Ba, Cry1Ca and Cry1Fa, have been shown to bind to APNs; however, a direct role of APN in cytotoxicity has been yet to be firmly established.	7.20501e-24
NZ_CP006003.1\|WP_046711795.1\|2407335_2407980_-\|DNA-binding-protein	gnl\|CDD\|225253	COG2378, COG2378, Predicted transcriptional regulator [Transcription].	1.70468e-32
NZ_CP006003.1\|WP_046711797.1\|2411300_2411795_+\|nuclear-transport-factor-2-family-protein	gnl\|CDD\|379275	pfam13577, SnoaL_4, SnoaL-like domain. This family contains a large number of proteins that share the SnoaL fold.	1.29562e-14
NZ_CP006003.1\|WP_082165029.1\|2422017_2423586_-\|hypothetical-protein	gnl\|CDD\|227511	COG5184, ATS1, Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell division and chromosome partitioning / Cytoskeleton].	1.38775e-23
NZ_CP006003.1\|WP_046711800.1\|2415373_2417071_+\|dihydroxyacetone-kinase-subunit-DhaK	gnl\|CDD\|237723	PRK14479, PRK14479, dihydroxyacetone kinase; Provisional.	0

>NZ_CP006003.1|WP_046711799.1|2414652_2415054_+|hypothetical-protein
MGEEHPLRIASELARAGRTAEAISCLESALEGMRSMAERPSNASLLARTAGLLCEESGRLPQAARYYEEALAVAAEREPLLLLSLVEVHRRLGQVAKARAYLDEAEALARSSADVDAARMVARLREAWAHDER
>NZ_CP006003.1|WP_046711798.1|2411916_2414574_+|hypothetical-protein
MLLGLSSSALGQPLVDAGEPFGLLPLIDEVNVGDPADPHPVVHGANSTSTIRSLTLGGVTRPVRVMTMGPQAKSFSYKLGVGKGLQAGRAYLLVVEYPDNESRLMAVANKGGDKFRGFSTGTSIGDFREQYAYPNPESLKYPLSNQWKQFRQFFYLHDRFVPIVGQRNVEDTRRPEGPAQGFWVSVGHFARHGGPTDKGTAVSRIRLFEVPNPSSLDLAIHYPPAPLPRRHIFWREEMNDDTAICAQGAQTDCQPAASPGTWFDYRMKQAKFLGIDTYGHDLMEFGYTEGWDADSFSAPPWYVQPRDPTLWATAVSRAAANGFSVLPYYEYTGAIAGERLYTNTRCSQDSDCKSLSQWHECIEPWQQPRVCGLRPLGEQRRCKPLFDRDGDIYSPIYWADDNCVDVSDPDALADVKKLMDATVLHFKGQVNFLGAWFRTRPTDLPVSFSPEALGRFSSDTGQSVSRAMLQTDLALRARYYAWWFGKRRAFLEAIRDYLRQNGVANAQVLFTPYPEEGLPTPEDLSDMAVTVTDDPATWATIDDQGCCAPGDTTTNCCQYRFPPTEPAVFLQDGTYRKAITADVLPPTEHLDRSWGEPFNSFPPADPDGFRTSEGVYLTYPFNRLFSVADPTLLGRFRGASGLAMVHHFPLNEDDGKGNYAQDTADGRYGNWPMGGLWGYLSMAVDRQGPYSMLAEARAVANGDPTLLGYLEASSISRGFPEYTRAFHAAFLALPALPSTVVPGAASDAEVVVRKMATAQGNFYAVVNTSMQSKTGVNIVLPGETQPIVDRVRRAVVTGTNLSLYPGQLLAWQVGGTEGVPGPADAGSDPGCVDETGVGTARPLKGMDDEVEAVQGCGGCGSTGGAGTLTLMGLVGLALMLRRKRA
>NZ_CP006003.1|WP_046711797.1|2411300_2411795_+|nuclear-transport-factor-2-family-protein
MREKDTQYVLDWIAIQELVAEYGQAIDFGKDTGDWSRWANVFTPQLTADYSRFMGGEPIHITREQAAEYGRVAVSAFSRVQHATATTIRIHFKNQTQAQVMAYAEVAHYFTLGGVQQEWTIVARYTHDVVKTAEGWRIEKVLLDPVHYRGNPLGLEFVQGKRLA
>NZ_CP006003.1|WP_082165576.1|2410598_2411237_+|hypothetical-protein
MSPSRRMSRTLLTAGDLAGTFVFAVEGGLTAARAGLDVLGILVLAFATALGGGMVRDVLLGAVPPLALQDWRYATTAFGGGALVMLLSGPLGHVPVTPLLILDAAGLALFTVTGAGKALSLRATALAAMLLGAITGAGGGTIRDVLLARVPLVLRADVYAVAALLGAGALLLARRLGASTVLAASVGAAVCFGLRTLAVLFHWKLPGILPQP
>NZ_CP006003.1|WP_046717587.1|2408036_2410475_+|DNA-polymerase-II
MAGMVEDEWLWGWDATPGIVSVWAEPDGRAFVWRRLPESGELLREDVRFRPWLVLSNLEDLEHLGPRLRPEREGPAPRRVTYQELSGPGALRFLIRAEDGRALASDVLQGASRRLGRPFANLRDLSAETVLSLPPEEQYLTASGRTYFRGLSFEALHRLQFDLETTGLDPGKDRIFLIAMRGPRGDTDVLEAHGDGDAAEADLLRRFVERVRQWDPDVIENHNLHGFDLPFVARRARRLDVPLALGRAGSPGLRHRPSARGSALGRGAERNADSMRRARYTVPGREFIDTLDAVLRHDFSARDLPGHGLKVVARHFGIAGPAREYIPGARVHEVFKTDPERVRRYARDDVAEAEGVARLLGGAAFALARMAPRRYERLADAGPATGVLDPLLVRAYLRSGAAIPAHEGGDGTAHSGAALHLFATGVARRVVKADVASLYPSLMREYRIGPKRDRLGALLSMVDRLVDQRLAAKKRAKAAPAGSTERHENDALSSAMKIIVNSAYGYMGAVGLTRFSDVHAANEVTRRGRAVLALLCRELARRGVTLLEADTDGVYFAVPEDWREEDERRVVAEVAALLPRRVQLEFDGRYAAMLSHEPKNYALQSHDGTLHLKGVAFRSSRAEPFGEAFLRKALRCLLAGDVAGVRDVYVDTVMALRRRRVPTTEVAAHVRLTKDSAQYAAVRERRRELAYEAMLTAGRTSWAAGERVRIYRAVGGRAGLLPEPAQDDVHEDVSAQGDEDPRDYDVEYYVRLLKDTFAARLERGLTPLDFSTVFDDPGQPSLFTPSLADSRPILTVVQAPPEDEPRQESLGG
>NZ_CP006003.1|WP_046711795.1|2407335_2407980_-|DNA-binding-protein
MQRTERLFALAEYLRGRRTGVTAETLAERFGVTIRTIYRDLDTLRAASMPVAAERGRGGGYALDRSYSLPPVNFTAREAALLVALGRFAIDMRLMPFAGTLESALDKVRAALSTSAQRELLDRLKELSFLGVPSLPSKPAVRAAIERAWFEQQPLRLTYVDGNYLETTREVRILSVVMDRHETRLDTQDVQSGERRPFRLDRIVHAEVLRAFEP
>NZ_CP006003.1|WP_046711794.1|2405509_2407186_-|long-chain-fatty-acid--CoA-ligase
MEKPWLKHYPPGVPAEIDDRQYPTLTHLLEEAFTKYADRPAFKCMGKVITYRELDALSRRVGAWLQSRGLERGATIAIMMPNVLQYPVCIAAILRAGYIVVNVNPLYTPRELEYQLKDSGAQAIFILENFATTLQQVLDRTPVRHVVVATMGDLLGGLKGTLVNFVVRKVKKMVPAYELPRAVSFKQVLSEGGSRTLTPATTTRDDIAFLQYTGGTTGVSKGAMLLHRNVIANLLQVEAWLKPAQQGRNIDQVNIVCALPMYHIFALTVCGLMGIRMGAMNILIPNPRDIPAFIKTLSEQPFHILPAVNTLYNALVNHPEFAKLDFSHLMVSNGGGMAVQKAVADKWFALTRVPLIEGYGLSETSPVATSNTPVATEYSGTIGLPVPGTEIAIRDEDGKDVPMGESGEICIRGPQVMAGYWNRPDETAKVMFPDGFFRSGDIGIMDERGHTRIVDRKKDMILVSGFNVYPNEVEGVVAMHPGVLEVAAVGIPDEHSGEVVKLFIVKKDPSLTEAQIMDFCREQLTGYKRPKSIEFRTELPKTNVGKILRRELREKKVA
>NZ_CP006003.1|WP_046711793.1|2401846_2405440_+|hypothetical-protein
MLGGILHFEWRHQTRQVVFHAAAVVFVALAFLFVSTGYGGDNLHVNSPHSVAQSLGLLSLTSLFVLGIFCANTVQRDAEHGMTELIYTTSVRKRDYLLGRFLGATLATLAVFGVATLALMVAPFLVTLAPERVGPVGVGRYLWPLAVLVLPNIVFAASLLFAVSALSRSTLATYVGGILVYAVYVVGSMWADSPLMAGTSPQTPEALARAALLDPFGLSAFFEQTRYWTEAERNTRLFALEGHLLWNRLLWLGVAACVLGGVHARFSFRKSAVTRRPDASADEVSGGTPSVYRPIEVDTAPRWAALVSATRLELLHVLGSWPFLALLVLWLFIVGMEVVTGAGRGEYGTLRIPTTGRVVEHLWTPLSQLGTLVLIYFGAELAWRERMARFDALLDATPVSSAVFVVSKLLALAALVGVLTGAPILLGMGYQLSRGVTALEPGLYLSSFYFAGLPLVLFAVAVLFLQAVSPHRYVGMVLSLALAIVSSQGAGWGLEHPLTRFAAAPGVVHTDLNGLGPMAGSFTAFMVYWSAFATVLALVTWGLWRRGLGFSLLARLRSLPARWGRGGGLAAGAAGAVLVLMASVILRDTVLRGTYESREASRDWKEAYERTYKVHEALPVPSITALTAKVDLFPREARYRVTGRYRLENRTREPIDTLWVAVPRSARPVSLALRGAEQVSHDERFGMVRFALSPALAPGDVSELSFDVTREERGVRATDFELALVENGTFLRNTEVFPSLGYRRTYELGNAAERRARGLPEQPRLPRLDERGAVPAPVEQGWHTLDLTVSTEGDQTVVAPGALRREWTEAGRRSFHFVEARPMTPMFAIVSARYAVERTRHQGVDVEVYYHPSHPYNVKAIQAAMTRSLDDFGARFQRYPDAQLRVVEIPSYWDFGALAMRQVIYFVEDRGFLTDMGRADDAVDLVTRRTAHEVAHQWWGHLLDPAPVEGATMLVESLTKYAEQRVLAGLHGERSLLPVLAFDRDRYLSGRAEEAEAEPPLYKGAGQSYLYYGKGALVMNALRDLLGEAKLDAALRHLLASQTRENTLTTLDLLAALYAQASAEQRVLVDQWMKEVVLYDLKVESASVEALEDGRFRVTARVATAKHARRGSEDVPLPMDEVLELAVYRGSPRDGAVEDVPLRVERHRFQGPSTQVTFIVEERPAYVGVDPGFLRIERERGDNFRKLTPQVQASASR
>NZ_CP006003.1|WP_046711792.1|2400958_2401834_+|ABC-transporter-ATP-binding-protein
MLRISAVSKSYPNGVQALRGIDLDIERGLFGLLGPNGAGKSSLMRILATLQAPDAGQVTFDGLDVLAHPEAHRRHLGYLPQDFGVYPGVSAVELLDHLGLLKGLTHAKARREQVDALLHLTNLHAHREKAVSGFSGGMRQRFGIAQALLGAPRLLIVDEPTAGLDPEERQRFHNLLGEVGESVVVLLSTHIVEDVRQLCPRMAILSEGRVLCEGAPEALVASLEGRVWRKTVEKAAVERYRADFPVLSTQLRAGRTRVHVLADARPEEGFEPVAPDLEDVYFSTLSARRAA
>NZ_CP006003.1|WP_046711791.1|2400663_2400870_+|cold-shock-protein
MATGTVKWFNDSKGFGFIAQDGGGDDVFCHHTAIQSDGHRTLREGQKVEFDVTKGPKGLQAANVRALD
>NZ_CP006003.1|WP_046711800.1|2415373_2417071_+|dihydroxyacetone-kinase-subunit-DhaK
MKKLVNEPKAVVRQMLEGFVALAPGQVLLDDETVVIRSDTPADPRQRKVSVISGGGSGHEPAHAGYVGAGMLDAAVAGDVFTSPSTDAVLAAIRAVSGPAGSLLVVKNYTGDRLNFGLAAELARAEGIPVEVVVVADDVALRDTVEPSRRRGIAGTVLVHKVAGAAAAAGLPLSDVLREAQAASAELGTMGVALGPCTVPAAGRPGFTLGDEEIELGLGIHGEQGVRRAQLQSADALVDTLLAAIVEDRRLATGARVALLVNGLGGTPPMELAIVTRRALAVLRERGLRVERAWSGTFLSALEMPGCSLSLLKVDDTLLTRLDAKTSAPAWGGEGRLAPERAPRPVTAAPSVSSAPAAKSPGMEKVHAAALAVASAFEASESRLTELDSAAGDGDLGISLSRGAAAIRALPESSWTNPSRALTSIGEALRRAIGGSSGPFYATALLRAARRLSEGPVDAPAWAEAFVLAVDAVANLGGAKPGDRTMLDALRPAADTFAQSLKAGKSPAEAWAACVREAGQGADATARMQPRLGRASYLGSRALGVPDAGAAAVVVWVKALTPFIG
>NZ_CP006003.1|WP_046717588.1|2418215_2418824_+|hypothetical-protein
MKLFDTLLQEASLHDKAGSASKRAALKAKLTPTDIVEQVAGDLRVSEGEDRRANGGLVVKGNLVLEDQGRLLVAGDLVVEGSIIHEGFDYSLLFVGGSLQAGNLLVHGEVVVLGGFKVQGVAWTYYSDYSTYADTLTARLVVADDREDAIGKVSAENHLVGHSSEIGPKLSKLLQKGLVDEEGEWSYTTLAKKLLKKEALLA
>NZ_CP006003.1|WP_082165028.1|2418961_2421061_+|hypothetical-protein
MHTPWAFPRARLAVSLLVPLLSWSCAGGVADAQDMPQGEAPSAPGDSSSLGTAADALATVLVAPGATWRYLDTGVDLGTGWTAPGYADGAWSQGASPLGYAETDLSTTVSFGSNTASKHITTYFRHTFTVTDAALVRELRLRLQRDDGAIVYLNGVEVLRSNLPSGTVGYRTLAPATISLPVEEQTWHEQAIDTAALRTGSNVLAVELHQSAANTSDARFNLELSATVAPAPSPISQCYPFDMPATGVLRAAPKKVFGFYYAIFPISIDNKAPAEDHWTSWLTPEARGGEYANIGGLMRDRPLPRAPWADSAWRQRDFEVEVRRAIAAGMDGFIYEHPYRVSSDTRNNQLTTMLAAAAAVDPQFRIVLSPDFPTEATGTTDGLVSMIASVANHPSVHKLDGAIVLASFNPERKSVAWWTEVKTRLASQGIQVTYWPLLSYTGDVTKYAEWNNLVTGFSTWGERTAQSGETMRRWSVESHRRGKQWMSPVAFEDVRHKLTDSENSSRVYWEAQNSLTFRTQFEKAIEGDADWVTLLTLTDYGESWMTASQERGYVIMDWIAYYTTWFKTGQRPTIVRDTLYYTHRRHRTDAPFDATKQTARAMKLRGGVAASNQVELLAFLKEPGRLVITQGTDVRTLDVTSAGVTAFQAPLVPGTTPVFELQRNGVTVQRLQSATPVVAQTVYQDFMYHAGGGRSCARP
>NZ_CP006003.1|WP_046711802.1|2421101_2422010_+|hypothetical-protein
MSATRYGFIDTKGELVIPSPHGTPFSFNEGLARMPTGDGWAFIDVKGETKLKVKRAFMGFSDGLALTDEGFIDPSGALVLPVTFKANFTKYVIAGAPYVNVGRFDSGLAPVMRSGAKASDGYINHQGEVVLDGFGGGLARAFFKGKALVSLKKPPKGETSRLIDPKGTCLATYSFESMGSSLMDGVVVVVKGQKLGFVNEAGEWVLAPGIASWDGALSECWFSEGLARVKVKGRYGFIDKKGGQVIEPRFEAVNGGFSEGLAAVKEGGLFGYIHPDGSWALTPRFASAQPFTHGRAVVLNAG
>NZ_CP006003.1|WP_082165029.1|2422017_2423586_-|hypothetical-protein
MRGTSATPRPRTSTRTASTSNERPSRGPDFPLSQQLSDNRNMSLLRPLLVSLAVVLLGCSGSPDDSGREDPPGEELVREFTGDAGTPDAGDSLAGLTRIATAEYQLFYLVDGRVLGLGSNRAGQLGVGHSNPYNQVPPVDISLPQGLRFKDVAGGGFQSLALDTQGRVWTFGQNLYGQRGDGTTNDQPNRATTPNNGQPYLVLTDSTGATFDDVVAVRSALLFNMALKADGSVWVWGMSGTAIGNTLGIAGDGNTAPRNITRPTKVPLPQGVRITSFTTNDNSIFALDDTGKVWAWGGSSSAETLGTGRFNDYARPNSLSIPTRVKELAAGGSRWAVALDEAGDLWGWGLQGTFLGLGPPAGGWYPVATPRKLSFPEFGSRKIIHVTANGHATHVILDDGSLWGWGDSAMGEVGNGVMLDFATYHTPYQWDWSNYQKMVFRPAQVAPGVTFKALHNTAQSFYGYATATDGTLYSWGRNKTGVLGNGVLPTGDVAGRPDSWNVATATPVPAHRLTVGIPTPSK
>NZ_CP006003.1|WP_046711804.1|2423521_2424169_-|hypothetical-protein
MDEETQAHYRRLLAEVEAWAKGFGGRLVLGPPVSEEDLALLPELLGTSATSVAPLPSGLLDFWRLCGFARVEVLRAEDDAEPVWTALPANFRVYSPDEVMASLSQVRIPAGVTRDRHPITTEHLIPFAAANRLPQDVQWCIATSGGGLKAPVLVRNHMDELAWACFQDSGRFVWETEGQRPGAVFDSFLDWLDAYARDVRDTAPEDLYPDGVYLE
>NZ_CP006003.1|WP_046711805.1|2424237_2425284_+|sensor-protein-lytS
MSRGRDGLLWVGAFSYWTLQGLAASSEAHSVRGVSWSHALLTDGFATALWAPVTIAVVYFGLRFPFDRRLWRSRLALHLGGALAVSFFRATVIYSLDPYFHWYDAPPAYTAVLEHALLYNPFIYLTLLGVAHAIYYAEQLRLRDTQLARAQLHALEAQLHPHFLFNTLNSISALVRRDPLGSERMIARLSDLLRETLQAAGREEVSLRDELRTLQLYLDIQGVRFTDRLRVEQDIAQEALGARVPHLVLQPLVENAIQHGIAPRSAPGTVTVTARREGPELLLEVRDDGVGLREGAAAKSEGSGKGLWITRERLVQLYGPAHRLKLEAREEGGARVSLAIPFRTERAA
>NZ_CP006003.1|WP_046711806.1|2425280_2426066_+|DNA-binding-response-regulator
MTQPIRVLIVDDEPLARARLKELLSEESDMAVIGECRDGNEAIDAIGRQRPDLVLLDVQMPEPDGFGVLRAVSREYQPAVIFVTAHRDFAVQAFEANALDYLLKPFDQERFRLSLTRVRERRRTGATELDAELVERLESLSSRLPPASERYATRLVAKVGWRMRFLRVEDIDYLEAEGNYVCVHQGKQSFLTRETMNAVEEKLDPRDFVRIHRSLIVRLDRVEEVEPLAPGEMVLTLRDGTKLTSGRSYRARLQRALDLPS
>NZ_CP006003.1|WP_046711807.1|2426178_2427156_+|Xaa-Pro-aminopeptidase-like-protein
MHRFTPSKSWSVGFIAALSSLSMACASQAPETAPVAEALGAAEVSSEEALRFLNCTAGGSLFAPGEVSLPDRSEYRLTFSADGNTAYYHVDSAEAPFQAIYETRKVNGHFTPGQLVSFSGTWLDTDPFLSVDGQSLFFSSTRPVTGTQERADSDLWVVHKQADGSWGEPLHLGPNVNSDRQELYVSATRDGTLYFASGTFDSDFNVYRAERRGPGYAPAEKLSAAVNSPDYWEYNSHISADGRVLIFASLNRPEGYGLGDLYASVNIGGKWTKAINLGPAVNTEKDEFHPSLSVDGRHLYFVRQTWAPFVPSDFYTLDTLCLLFQ
>NZ_CP006003.1|WP_046711808.1|2427478_2428273_-|dioxygenase
MSDEDQRHHQGLQQDLRVLMARAGRRQVLRWMAGASLLPWLGCGDDDDPTPGPSDCSRIPEETAGPYPADGSNGPNVLQQSGIVRSDIRASFGNTRTVAEGVLTTVTLTLVDINDACAPLAGRAVYLWHCDNSGEYSLYGTGITNENYLRGVQETNSQGQVTFTSIFPACYSGRWPHIHFEVYPDLASATSSANKRVTSQLALPKATCDEVYATAGYSQSVANFQRVSLATDNVFSDGSSTQVATVTGNLTDGYVITLVVGVAG

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Crispr_ID: NZ_CP006003_12

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP006003_12

2955740-2956163

Orphan

Consensus_repeat	Method
CCTGGGGNGCGGCGCCNGGCAGCGGAATGGC	CRT

7 spacers

The CRISPR arrays of NZ_CP006003_12

>merge|NZ_CP006003|12|2955740-2956163|CRT
CCTGGGGAGCGGCGCCGGGCAGCGGAATGGCGCCCGTGTCGTAGCCGTAGGGGTCGGCCTGAGGGGCACCGCCGGGCAGCGGAATGGCGGCGGCGTCGTAGCCGAAGGCGTCCGCCTGAGGCGCGGCGCCAGGCAGCGGAATCGCCCCCCCATCGTAGCCGTAGGGGTCCGCCTGGGGCGCGGCGCCAGGCAGCGGAATGGCCTCGGGACCCGCACCCATGGCGATGGCACCCGAGGGAGCGGCGCCGGGCAGCGGAATGGCACCGCCGCTGAAGGCATCCGCCTGGGGCGCGCTGCCGGGGAGCGGAATGGCGCCGGCGTCGTAGCCGAAGCCGCCCGACTGGGGCGCGGCGCCGGGCAGCGGAATGGCCTCGGCGCTGACGCCCATGGCGCCGGAGGGCGCTGCGCCAGGGAGGGGAATGGC

>NZ_CP006003|12|1|2955740-2956163|CRT
CCTGGGGAGCGGCGCCGGGCAGCGGAATGGC	GCCCGTGTCGTAGCCGTAGGGGTCGG
CCTGAGGGGCACCGCCGGGCAGCGGAATGGC	GGCGGCGTCGTAGCCGAAGGCGTCCG
CCTGAGGCGCGGCGCCAGGCAGCGGAATCGC	CCCCCCATCGTAGCCGTAGGGGTCCG
CCTGGGGCGCGGCGCCAGGCAGCGGAATGGC	CTCGGGACCCGCACCCATGGCGATGGCAC
CCGAGGGAGCGGCGCCGGGCAGCGGAATGGC	ACCGCCGCTGAAGGCATCCG
CCTGGGGCGCGCTGCCGGGGAGCGGAATGGC	GCCGGCGTCGTAGCCGAAGCCGCCCG
ACTGGGGCGCGGCGCCGGGCAGCGGAATGGC	CTCGGCGCTGACGCCCATGGCGC
CGGAGGGCGCTGCGCCAGGGAGGGGAATGGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP006003.1\|WP_046712144.1\|2961577_2962501_+\|NAD-dependent-epimerase	unknown	unknown	gnl\|CDD\|187551
NZ_CP006003.1\|WP_046712141.1\|2957950_2958661_+\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|133022
NZ_CP006003.1\|WP_046712145.1\|2962916_2963333_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_082165581.1\|2944454_2945888_-\|DNA-polymerase-III-subunit-gamma/tau	unknown	unknown	gnl\|CDD\|274111
NZ_CP006003.1\|WP_046712146.1\|2963424_2967201_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274350
NZ_CP006003.1\|WP_046712143.1\|2960682_2961537_+\|glycerol-acyltransferase	unknown	unknown	gnl\|CDD\|153249
NZ_CP006003.1\|WP_046717676.1\|2945943_2947482_-\|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|224154
NZ_CP006003.1\|WP_046712136.1\|2941080_2941674_-\|recombination-protein-RecR	unknown	unknown	gnl\|CDD\|234616
NZ_CP006003.1\|WP_046712140.1\|2956546_2957860_+\|amine-oxidase	unknown	unknown	gnl\|CDD\|224153
NZ_CP006003.1\|WP_046717679.1\|2959626_2960277_-\|lipase-class-2	unknown	unknown	gnl\|CDD\|224001
NZ_CP006003.1\|WP_046712137.1\|2941680_2941998_-\|nucleoid-associated-protein,-YbaB/EbfC-family	unknown	unknown	gnl\|CDD\|376829
NZ_CP006003.1\|WP_046712147.1\|2967590_2969681_-\|ATP-dependent-DNA-helicase-RecQ	unknown	unknown	gnl\|CDD\|223588
NZ_CP006003.1\|WP_082165081.1\|2944045_2944990_-\|DNA-polymerase-III,-subunit-gamma-and-tau	unknown	unknown	gnl\|CDD\|237871
NZ_CP006003.1\|WP_046712142.1\|2958681_2959623_+\|polysaccharide-deacetylase	unknown	unknown	gnl\|CDD\|200565
NZ_CP006003.1\|WP_046712138.1\|2949454_2949922_-\|nucleoside-deaminase	unknown	unknown	gnl\|CDD\|223663
NZ_CP006003.1\|WP_046717673.1\|2942058_2942829_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237871
NZ_CP006003.1\|WP_046717680.1\|2967253_2967574_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_082165582.1\|2947627_2949043_+\|mannosyltransferase	unknown	unknown	gnl\|CDD\|281842
NZ_CP006003.1\|WP_046717678.1\|2950381_2951662_-\|serine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235461
NZ_CP006003.1\|WP_046712135.1\|2939138_2941037_+\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|270916

Protein	Function_ID	Function_description	E-value
NZ_CP006003.1\|WP_046712144.1\|2961577_2962501_+\|NAD-dependent-epimerase	gnl\|CDD\|187551	cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase (G4E), subgroup 3, extended (e) SDRs. Members of this bacterial subgroup are identified as possible sugar epimerases, such as UDP-glucose 4 epimerase. However, while the NAD(P)-binding motif is fairly well conserved, not all members retain the canonical active site tetrad of the extended SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	1.26978e-114
NZ_CP006003.1\|WP_046712141.1\|2957950_2958661_+\|glycosyltransferase-family-2-protein	gnl\|CDD\|133022	cd04179, DPM_DPG-synthase_like, DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the existence of adapter molecules for membrane anchoring. This family also includes bacteria and archaea DPM1_like enzymes. However, the enzyme structure and mechanism of function are not well understood. The UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate. This protein family belongs to Glycosyltransferase 2 superfamily.	3.74507e-36
NZ_CP006003.1\|WP_082165581.1\|2944454_2945888_-\|DNA-polymerase-III-subunit-gamma/tau	gnl\|CDD\|274111	TIGR02397, DNA_polymerase_III_subunit_gamma, DNA polymerase III, subunit gamma and tau. This model represents the well-conserved first ~ 365 amino acids of the translation of the dnaX gene. The full-length product of the dnaX gene in the model bacterium E. coli is the DNA polymerase III tau subunit. A translational frameshift leads to early termination and a truncated protein subunit gamma, about 1/3 shorter than tau and present in roughly equal amounts. This frameshift mechanism is not necessarily universal for species with DNA polymerase III but appears conserved in the exterme thermophile Thermus thermophilis. [DNA metabolism, DNA replication, recombination, and repair].	2.6891e-166
NZ_CP006003.1\|WP_046712146.1\|2963424_2967201_+\|hypothetical-protein	gnl\|CDD\|274350	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein. This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.	1.00237e-28
NZ_CP006003.1\|WP_046712143.1\|2960682_2961537_+\|glycerol-acyltransferase	gnl\|CDD\|153249	cd07987, LPLAT_MGAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: MGAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this suubgroup are such LPLATs as 2-acylglycerol O-acyltransferase (MGAT), and similar proteins.	6.80081e-41
NZ_CP006003.1\|WP_046717676.1\|2945943_2947482_-\|NAD(P)/FAD-dependent-oxidoreductase	gnl\|CDD\|224154	COG1233, COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism].	6.78438e-72
NZ_CP006003.1\|WP_046712136.1\|2941080_2941674_-\|recombination-protein-RecR	gnl\|CDD\|234616	PRK00076, recR, recombination protein RecR; Reviewed.	1.84755e-114
NZ_CP006003.1\|WP_046712140.1\|2956546_2957860_+\|amine-oxidase	gnl\|CDD\|224153	COG1232, HemY, Protoporphyrinogen oxidase [Coenzyme metabolism].	2.3119e-44
NZ_CP006003.1\|WP_046717679.1\|2959626_2960277_-\|lipase-class-2	gnl\|CDD\|224001	COG1075, LipA, Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only].	4.77746e-25
NZ_CP006003.1\|WP_046712137.1\|2941680_2941998_-\|nucleoid-associated-protein,-YbaB/EbfC-family	gnl\|CDD\|376829	pfam02575, YbaB_DNA_bd, YbaB/EbfC DNA-binding family. This is a family of DNA-binding proteins. Members of this family form homodimers which bind DNA via a tweezer-like structure. The conformation of the DNA is changed when bound to these proteins. In bacteria, these proteins may play a role in DNA replication-recovery following DNA damage.	3.41697e-28
NZ_CP006003.1\|WP_046712147.1\|2967590_2969681_-\|ATP-dependent-DNA-helicase-RecQ	gnl\|CDD\|223588	COG0514, RecQ, Superfamily II DNA helicase [DNA replication, recombination, and repair].	6.81876e-152
NZ_CP006003.1\|WP_082165081.1\|2944045_2944990_-\|DNA-polymerase-III,-subunit-gamma-and-tau	gnl\|CDD\|237871	PRK14965, PRK14965, DNA polymerase III subunits gamma and tau; Provisional.	1.13604e-122
NZ_CP006003.1\|WP_046712142.1\|2958681_2959623_+\|polysaccharide-deacetylase	gnl\|CDD\|200565	cd10940, CE4_PuuE_HpPgdA_like_1, Putative catalytic domain of uncharacterized bacterial polysaccharide deacetylases similar to bacterial PuuE allantoinases and Helicobacter pylori peptidoglycan deacetylase (HpPgdA). This family contains many uncharacterized bacterial polysaccharide deacetylases (DCAs) that show high sequence similarity to the catalytic domain of bacterial PuuE allantoinases and Helicobacter pylori peptidoglycan deacetylase (HpPgdA). PuuE allantoinase appears to be metal-independent and specifically catalyzes the hydrolysis of (S)-allantoin into allantoic acid. Different from PuuE allantoinase, HpPgdA has the ability to bind a metal ion at the active site and is responsible for a peptidoglycan modification that counteracts the host immune response. Both PuuE allantoinase and HpPgdA function as homotetramers. The monomer is composed of a 7-stranded barrel with detectable sequence similarity to the 6-stranded barrel NodB homology domain of DCA-like proteins in the CE4 superfamily, which removes N-linked or O-linked acetyl groups from cell wall polysaccharides. In contrast to typical NodB-like DCAs, PuuE allantoinase and HpPgdA do not exhibit a solvent-accessible polysaccharide binding groove and might only bind a small molecule at the active site.	8.57609e-103
NZ_CP006003.1\|WP_046712138.1\|2949454_2949922_-\|nucleoside-deaminase	gnl\|CDD\|223663	COG0590, CumB, Cytosine/adenosine deaminases [Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis].	2.15332e-62
NZ_CP006003.1\|WP_046717673.1\|2942058_2942829_-\|hypothetical-protein	gnl\|CDD\|237871	PRK14965, PRK14965, DNA polymerase III subunits gamma and tau; Provisional.	1.06407e-19
NZ_CP006003.1\|WP_082165582.1\|2947627_2949043_+\|mannosyltransferase	gnl\|CDD\|281842	pfam03901, Glyco_transf_22, Alg9-like mannosyltransferase family. Members of this family are mannosyltransferase enzymes. At least some members are localized in endoplasmic reticulum and involved in GPI anchor biosynthesis.	6.07449e-25
NZ_CP006003.1\|WP_046717678.1\|2950381_2951662_-\|serine--tRNA-ligase	gnl\|CDD\|235461	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional.	0
NZ_CP006003.1\|WP_046712135.1\|2939138_2941037_+\|serine/threonine-protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	6.50685e-100

>NZ_CP006003.1|WP_046717678.1|2950381_2951662_-|serine--tRNA-ligase
MLDLRNVAQNFDAVVARLKTRGGNLDLGPFQRLFSERRELYVSMESLAARRNAANEEMKKKAKEDPKALDALRGDLRAVSQDIKEKENRLKEVEEEINGILLLIPNVPHESVPVGESADQNVQVKSWGEKPNLPFTPKQHFELGEKLGMLDFERAAKVSGSRFTFYKGALARLERALVTFMIDVHTQKGYTELLPPYLVLRETMMGTGQLPKFEDDAFKTLGDPERFLIPTSEVPVTNYHADEILEGESMPIRYCAFSPCFRAEAGAAGKDTRGLIRQHQFHKVEMVKFAQPDKSLDELEAMTDDACDILRRLGLHHRVMLLCTGDMGFSARKTYDIEVWLPGQNAYREISSCSDCGDFQARRAKIRFRAQKGDKPQLAHTLNGSGLAVGRTSIAILENYQRDDGTVAIPEVLWPYMGGLKELKPL
>NZ_CP006003.1|WP_046712138.1|2949454_2949922_-|nucleoside-deaminase
MSDDEAFMQQALALAREAATLGEVPVGAVAVHDGNIIGTGFNRREVDRNPLAHAEVLALDAARRHLGVWRLTGVTLYVTLEPCAMCAGALVQSRVTRLVFGAMDPKAGAVGSLYNLAEEPRHNHRLQVTRGILAEDSTTLLKTFFGRLRAKRRDN
>NZ_CP006003.1|WP_082165582.1|2947627_2949043_+|mannosyltransferase
MPPEPPPSDAARPHPPARPSRLAMAALVVVALLPAIIAVAQLGRIHPDEVFQALEPAYWRVHGYGVLAWEWRDGIRNWAVPGVLAAFLKLAGMLGITDPQGYRAVTAVPQLALHAWSLWAVYRFAARRTGVSGGWLAVLLVGLYGPVLVFAGRTLAESFSTSFLVVAMEALDRRERETRAGLLGGAALGLAVVTRYPSAICVLTALLYLLVARRWRMLAFTCLGGLVVAAGLGLLDHLTWGSPFHSFFTYVRFNVLSGEAAARFGSAAPGFYLLPLVTAVPGWAWVAVPLGLGAGRRGVSLPLTCAAVYLGVLLVTAHKEERFLYPALVLGVLAAAPVVANLLTTRVPPSARWGVTAMALVTGLVSARWFPPQDLRADQFRAIVASTRMGGATGLLIVNEGLWGSGGFFYLGQRIPWLTCDWPRDDAFQRGLRDRTFNRAVSFEDRALPELQAGGFRIEKRIGRETLLVRD
>NZ_CP006003.1|WP_046717676.1|2945943_2947482_-|NAD(P)/FAD-dependent-oxidoreductase
MPDVIVVGAGHNGLVTAAMLARRGLSVTVLEEKDVIGGACRTEYPFKSAPRLGVSTGAYLLGLMPPELLRELELDLPLKRRDPHYFLPTTGERYLLFGSDERELKRQFLEFFSQADWEANQAMNAELAALRDDLAPAWLKPPLTHEETAERYIRPALREHFIKLCRGSARQYLERFGFKSDFVKAMYAVTDAFSGLDGGYDTPGTGMNLLVHNMCRLPGSGGTWMIVGGGMGTVTQSIANVARKHGAVIRTGAKVTSVRVDAGVVKGVVLENGEELRASVVVSNGDPFRTLKLVDAAALPADYRAKVGAMAVPGTTLKVNLCLKELPKFTCLPEDKGQFGPTIHLLPQEDDVLGALERSYRDTQAGRLSDFPSIEWYIHTTVDPSLRDAEGRHNSALFVEWVPYKLEGTTWEKEESRYVQQLLSVCDRFAPGTSDLVQEYFALTPPKIESHFGITGGHIHHVDNKLGFTDRLPYETPVQGLYFCSAGCHPAGSVIGAAGHNSAQVVLKALGR
>NZ_CP006003.1|WP_082165581.1|2944454_2945888_-|DNA-polymerase-III-subunit-gamma/tau
MSYLVLARKWRPQKFDDMTGQEHVVRTIANAIKMDRVAHAYLFCGPRGVGKTTAARLLAKALNCEKGPTATPCGECRACTEIAAGTSVDVAEIDGASNNGVENVREIRENAKYLPQRDRHKIYIIDEVHMLSGAAFNALLKTLEEPPGHVKFIFATTEAHKLPDTILSRCQRHNFRRISAARMLQRLQEICKAEGAGISDRSLSLVVRQSEGGMRDALSLLDQVLASCGANPTDEEVAEALGAIDRTMVQDFADALVHKDAKRVLERVEEVFNRGLDLKRLAEELAMQLRQHGDRRRYQRGRGGDRRCLQQRRGERPRDSREREVPAAARPAQDLHHRRGPHAVGGGVQRAAQDAGGAARAREVHLRDDRGAQAPGHHPVALPAPQLPPHLRGADAPAAAGDLQGGGRGHLGPLVVARGAPVRGRHARRAQPAGPGARLVRRESHGRGGRRGAGRHRPDDGAGLRRCAGAQGREARA
>NZ_CP006003.1|WP_082165081.1|2944045_2944990_-|DNA-polymerase-III,-subunit-gamma-and-tau
MDVAEIDGASNNGVENVREIRENAKYLPQRDRHKIYIIDEVHMLSGAAFNALLKTLEEPPGHVKFIFATTEAHKLPDTILSRCQRHNFRRISAARMLQRLQEICKAEGAGISDRSLSLVVRQSEGGMRDALSLLDQVLASCGANPTDEEVAEALGAIDRTMVQDFADALVHKDAKRVLERVEEVFNRGLDLKRLAEELAMQLRHLFVTKTLGEAPAELAESEQKALVALAKDAESAQLTRLFDVVHGSVWDVSRAAQPRLALEMALLKAIQLSPGGSIPELLAKVDRLTAGLPQSDKANAGAPGGRSSSTNFRA
>NZ_CP006003.1|WP_046717673.1|2942058_2942829_-|hypothetical-protein
MSPPGPHAGATPLSRTTEPAPTVRVINVRKPEPPPGPPEPPPYGDSDEESRFYPEEASPGGCASGECIPEPEAPTAAPEPEPPPMAATPAPVARGRDNPNLPLIERWRAAVETVKAGSLRHGTALANGRLMSMKAGEIILGFLPAAGLHRMSVSAAAGKATIDKLLAEHFGRPVKLSFQDVSADDSRAAPSLAERDAQSRATHEKNTESKVRNHASVRSVLLVLGGEIEHIQIYEPERPSAASAADAPVEAPDDSA
>NZ_CP006003.1|WP_046712137.1|2941680_2941998_-|nucleoid-associated-protein,-YbaB/EbfC-family
MPGVDLNYFIRQANKLTEKIEERKQQLAEETVEAKAGEGRVTVVANGIQEIRSIKIDKEAIDPNDTSMLEDLITAAVNAALASSRQHMQRELAKISGGIKIPGVT
>NZ_CP006003.1|WP_046712136.1|2941080_2941674_-|recombination-protein-RecR
MTPDPLNRLVAQLAKLPGIGEKTAQRLAFHILRSPGEYASELSQAIREVKEKVHLCVRCFSLTDTETCGFCRDHRRDERVLCVVETFADLMALERTREFKGRYHVLHGVLSPLEGVGPDQLRIKELLERLTDSQVEELILATNPDVEGEATALYLTRLLKPMGLRLTRIAQGLPMGGDLEYADQATLAKALSARRDL
>NZ_CP006003.1|WP_046712135.1|2939138_2941037_+|serine/threonine-protein-kinase
MSPPQTTQPGSGTEEAPPPLLRPYGPYVLVRKLAEGGMAEIFLAKLLGADGFERNVVIKRMLPHLSNIPDFVEMFRDEARLAAKLSHPNIVQIQELGFTEGCYYICMEYLAGEDFSTTLRLAGRRRAYLPFPIVLRVLIDSARGLHYAHEFCNEMGQPLNVVHRDISPSNLYLTYQGQVKVLDFGIAKAESRLANTRTGVVKGKYMYMAPEQAKGQGVDRRADIFALGVSLYEALTHVRPFSRENDLAVLNALLHGEFKRPRELRPDLPAELEAIVLKAMAPLPQDRYATAEAFAEDLEAFLGEHLSAAGTPQLGAFLRSHFGEDRFTERTRIPTLSSLSAALGVVTQATGVVEMGTDVVGAPSSATGSTDVATARGWSARSPASSSGLVPAATKTPATESAPMPVAAPRARGWRPLVIGLAGGLLLAGVGIVGYARLVAPVSAGVVAPAAPPIAAVAPAEAPVPRVAAPSTEGTAEPAQQAVVPVSPPPVGTQPPEGVAAQGTGGEAGVVGSRLSPPPPVEDAAEGKSVKGTAKKKVSLTVDDISRVVAKGRSRITTCFEKNRADLPSSEGQVQVEFSIASTGKVRAGVTGSLAETGVGRCLRAQAERLRFPAHLDEEVNVMVPFSWRLTP
>NZ_CP006003.1|WP_046712140.1|2956546_2957860_+|amine-oxidase
MEPIVILGAGLAGLSTAHFLQKPWRLIEKSERVGGLIKTEVIDGCYFDPTGHWLHLRDPEIQELVNTRWLPGQMVRIQRKAGIFTRGVFTRFPYQVNTHGLPPEVVSENLIGYVDAIYGEKGRALREREPRDFEEFILRYMGEGFAKNFMVPYNQKLWTVHPREMSAAWVGRFVPRPSLKEVVDGALGAGSDAVGYNASFLYPREGGIESLARAMLRDLKGGELSLNTEPTSIDWKARKVVLNDGRTLSYSGLVSSVSLPGLVRLLAQGASGVPDEVVAAAKRLRATTVTYVAVAARGPNRQPWHWIYLPEPEFHTYRIGSPSAVYDALAPKDTSTFYVEYSHHGELSPATAEQYAVQDLVRSQMIHSADDVLFAQAREIPHAYVLYDEAYGPAKAEILRFLEHAGIQTAGRYGQWEYSSMEDAILGGRACARTLNG
>NZ_CP006003.1|WP_046712141.1|2957950_2958661_+|glycosyltransferase-family-2-protein
MAPHLSVVIPVYNEESIIASAAEELRQGLDARGLDYEIIFAENGSRDATTSILDELCAKHPRMRWFHSERPNYGVALKAGILMARGTYVICDEIDLCDVTFYDAALPRLERGEADMVVGSKAAKGASDQRPLIRRAATRVHNKLLKVTLGFQGTDTHGLKAFRREALLPVIQKCVVDMDVFASEFVIRAWREGLKVMEIPIQLHEKRQPSIHLFKRVPNVLKNVGKLFYVIRVRGT
>NZ_CP006003.1|WP_046712142.1|2958681_2959623_+|polysaccharide-deacetylase
MTRIASISVDLDSLPHYCRIHGLPESLLDARARSLVHQVAVPRFRELWDALGVPGTFFAIGEDLESDPVAAAGMRAAHEAGIEVASHSHAHDYALTRRGPDAILADLRRADDVILQATGTRPVGFRAPGYTLNADLYAATQTLGYQYGSSAFPAAPYYAAKAAVMGALALVGRPSRSVLDTPRVLLAPRVPYRPDPANPYRRGTGSVLELPMAVTPALRFPFIGTFATTLPLRSLRGAWRSCRRDTFFNFELHGVDVLDATDGIPGELVRQQRDLRVGAARKLERLREIFGWLRSECDVVTLRDAAGRLSASV
>NZ_CP006003.1|WP_046717679.1|2959626_2960277_-|lipase-class-2
MTAASLAVSPRLAPVEQRAPVLLVHGIGDDASAFDALRGRLEQEGWPHVHAISLVPNNGSEGIPALARQVAREAEALRARTGARRVDVVGFSMGALVSRYWVQLLGGRLVVRRFISISGPHAGTGLAFLGRGKGVTQMRPGSRLLRALQQDPRPWGATEVHSFWTPWDLTILPASSSRLPGASERRFPVLLHPWMLTDRRVHDAVVDVLGSPAVAR
>NZ_CP006003.1|WP_046712143.1|2960682_2961537_+|glycerol-acyltransferase
MLERLGDRVKKGLRDWTDRLANDEQKERMLALARPQNEYGVDPFGYNLDFSLSAVAPFLWLYRNYFRVETFGVEKVPAGRVLLVSNHSGQLPLDGAMIGVSLMLEASPPRAMRSMVEKWVPSLPYVSTFMARMGQIVGTPENCRRLLESDEAILVFPEGLRGINKLWPQRYQLQEFGLGFMRLALETRTPIVPVAVVGAEEQAPALMDLKPVAKLLGFPSFPITPTGVPFPLPTKYRIYFGDPMHFSGRPDDEDSELDKKVRTVKAAIQSMLHQGLKERRGVFW
>NZ_CP006003.1|WP_046712144.1|2961577_2962501_+|NAD-dependent-epimerase
MRPAVVVTGISGNLGRTLAKLLHKHERIIGIDRRPFVGRPKDVEMYELDLRKKKAEDVFRKNEVRAVIHMGIMHDPRMSEEEHHSFNVVGTTRLLEYCAKYGVKKVVVLSSANVYGPSPDNSNFLTEDAPLMAASRFSGVRDLIEVDMLAHGFFWKHPHIETVILRPVHIVGPTIKNAPSNYLRLRYPWMMAGFDPMIQLIHVEDVARAMVAALRPEPKGVYNVVGPGEVPLSAVMRELGNSPIPVPHPVARPLLGMLFKYRLANFPPPELDHIQFLCAVDGSRWVQDVDWKPRHSMRETIRAVNGE
>NZ_CP006003.1|WP_046712145.1|2962916_2963333_-|hypothetical-protein
MNRLPALFLVLALSGCATVSKKSNLEELKPTVEQFHQVIRWKDFRSAARFIVPEKRKAFTKARIALNDERDLSITDYEIEDGQLSEDGTRAFIQSRIQWMRLPSASEHVSVVTSEFVYQHGTWLLERQDEGPFADELR
>NZ_CP006003.1|WP_046712146.1|2963424_2967201_+|hypothetical-protein
MAKSMVERYEQLLRQDPTSSVFVELAKALLEKGDAPRAIEVCEQGVSHHPSSTVGRVLWGKALIQLGRPAEAMEQFDRAIAIEKDNPYAYNLIGEVLLQRGLYRSALPILRKAVALQPNDGRVKLWLEQAQQALAGGPAPVFADLMGLEKAESEEGESEPDAAKPESAEGAPAAASPMAAARLRAAALGDAAKAASASGPGASKSAGARAAADLASAAAAGGHASPGDAGAPGGEDASSTEEGGAQASLGAPGDASDAETSSSDSLGLIDRQVPVLRPTSGTPLPSLELSLFDEEDGARSPDANAPAGEGADAGSSQEGQALDPAAFESGPSASSDAGAVSDETSEQALLRSSEFTTAKPVVPAASTDSTESDEEQALLRSSEFTTAKPVVPATSGGLLGDLPPPDPTAATPVVARAQSQARGSGSKRSLLEDLPDASDAAAATGRAKAGAPKQDTEALTAAYEKELRQKLAREAAKTSFLKRNGVKVAGAAVLLMVVIAVIVGVVRIRAATGGQTLNEALAKSEDLITQDTRASLDGALQQLDRALDMDESSSRAWALKAWTHALLFADHGLSPEDRLKALEALEKPGVKEAAPGLTLATNVLVADDRGREPARRALLAATEESTEVHALAASLLLAAKDEKKALERFDRALRASPSNVRALVALGGYYLASEDFPHAIEMFGKARTKSPKHAVARIGQAEARLALEQDLEASLSDVAPLAGSPELPAALGARQQLVHGRLLSAVGKHDEARALLAKGTQGPLAFDFQLAQGAASRAAGKLDAAQSAYEAALKLQPKSDEAREGLGRTLLDRDRERDVLTRLEADGGRKVALVRGTAYARLGDWKRARTELARTRVNERYPPEAVSLLALADAAEGNAAQARELLEKALAASKRPRNDMRLALGQVYWRERAFDKAQSQFEEAQKDPRDYEASCSLGRLLLARGLPDMALKPLTQAVERNGSHGEARDALGRTLLALGRTPEALKQFETWQLDNPGSADAHKGFALALFHSGRRKEAEGAVGRSAKLAPDDAEAHRLRAAILFAAGDAKGGFSALERANKLNPKDPDTFCEIAHAFLRQGNPDNADAAFAAARREGPDATCGRVGELYAQLPSGGRPAARTLEDLASRAPTVWDKAFAQATMARVLLGAGAVKEARTAAEEAVRLAPYQGRSHLALGMVALKQRQEPVAKASLLKAVELEPTDGLAHLALADVLVRESAELPRAVESYEAFLRLAGGSEDAGRVKKALPSLKKKAAR
>NZ_CP006003.1|WP_046717680.1|2967253_2967574_+|hypothetical-protein
MWGNAFLLSALYLLVGVVVELALRYFPSLFLQRLSLSLDSLPARALELMGAMEPLRTAYFNGRIPEYAVRLVFGLTTVAVIFLLALVVGTVMGTLRHLLSRRTRGA
>NZ_CP006003.1|WP_046712147.1|2967590_2969681_-|ATP-dependent-DNA-helicase-RecQ
MVDMRAMSVALPYLEEAQQGLVRHFGLTQFRPGQAEVISTVLSGRNTVVVMPTGAGKSLCYQLPATLLPGLTLVVSPLIALMKDQVEQLTARGISATFINSSLTDLERAERMRRLRGGEYKLLYVAPERFRSASFVQMVTDVGVDLLAVDEAHCISQWGHDFRPDYALLGQVRKRLRPPRTVALTATATPEVRADIVRVLLMKEPREFAMGFDRPNLFLGKQEVGGDTDRHEACARLAALGGSGIIYCSTRRAAEGVFSELHGRKLKAVLYHAGMEDDARRRAQDTFMSTPDAVAVATNAFGMGIDKPDIRFVAHANIPRAVEAYYQEIGRAGRDGGEARAVLLFNHSDVYTQERLIQGSHPSEAVLADVWGVLQSVEEFERGVHVLAGMVNASEFEVSAALRIFERAGKLERGGRGEGEHGVLLTEKAQAAHPHSPDAQRLLKSLVETFPIGRQATTELTILARRIGLSVDETRHALGLLEKAGVVRVRRPFSGRSIRALLRMPFRELGMDLSHVREQERQNLQLLRRMTDYAYADRDSRCRRGAILHYFGQQDVETACGNCDVCAPAKMPVLLSGGPSASRARAAAAAPLVTNYSELASTELRRWRKELSKDLGVAPFIIFNDATLLGLAAALPIDREGFLTVKGTGESRWERFGPKVVEICLMARAAGHEPQVAPMAAARAKKPRIRRALGTD

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Crispr_ID: NZ_CP006003_15

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP006003_15

3422596-3422672

Orphan

Consensus_repeat	Method
CCACGTCCCCGGAGCCCTCGAGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP006003_15

>merge|NZ_CP006003|15|3422596-3422672|CRISPRCasFinder
GCACCTGGCCGGAGCCGGAGAGCGAGGCGCCGGTGAGGCGCGGCAGGGTGACGTCCACGTGCGCGGGGCCCTGGGGG

>NZ_CP006003|15|13|3422596-3422672|CRISPRCasFinder
GCACCTGGCCGGAGCCGGAGAGC	GAGGCGCCGGTGAGGCGCGGCAGGGTGACGT
CCACGTGCGCGGGGCCCTGGGGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP006003.1\|WP_052770942.1\|3428012_3432068_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|271320
NZ_CP006003.1\|WP_046712434.1\|3412052_3412775_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_082165105.1\|3409268_3412040_+\|DUF4157-domain-containing-protein	unknown	unknown	gnl\|CDD\|379338
NZ_CP006003.1\|WP_046712435.1\|3415004_3415832_-\|UDP-galactose-lipid-carrier-transferase	unknown	unknown	gnl\|CDD\|274737
NZ_CP006003.1\|WP_046712433.1\|3408566_3409052_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046712447.1\|3439801_3440125_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_052770939.1\|3412875_3414492_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372403
NZ_CP006003.1\|WP_046712445.1\|3436839_3439440_-\|putative-baseplate-assembly-protein	unknown	unknown	gnl\|CDD\|274051
NZ_CP006003.1\|WP_046712438.1\|3419832_3420420_+\|2OG-Fe(II)-oxygenase	unknown	unknown	gnl\|CDD\|214780
NZ_CP006003.1\|WP_046712444.1\|3432077_3434267_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046712437.1\|3418156_3419722_+\|aspartate-ammonia-lyase	unknown	unknown	gnl\|CDD\|274045
NZ_CP006003.1\|WP_046712446.1\|3439441_3439798_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377431
NZ_CP006003.1\|WP_046712442.1\|3425767_3426499_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046712443.1\|3426586_3427954_+\|peptidase-S74	unknown	unknown	gnl\|CDD\|240612
NZ_CP006003.1\|WP_046712441.1\|3424418_3425648_-\|histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_CP006003.1\|WP_046717745.1\|3434263_3436831_-\|putative-baseplate-assembly-protein	unknown	unknown	gnl\|CDD\|274051
NZ_CP006003.1\|WP_046712440.1\|3423007_3424387_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_052770940.1\|3414442_3414769_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046712439.1\|3420429_3422016_-\|oxidoreductase	unknown	unknown	gnl\|CDD\|235736
NZ_CP006003.1\|WP_046712436.1\|3415963_3418141_+\|DUF4139-domain-containing-protein	unknown	unknown	gnl\|CDD\|379285

Protein	Function_ID	Function_description	E-value
NZ_CP006003.1\|WP_052770942.1\|3428012_3432068_-\|hypothetical-protein	gnl\|CDD\|271320	cd05819, NHL, NHL repeat unit of beta-propeller proteins. The NHL(NCL-1, HT2A and LIN-41)-repeat is found in multiple tandem copies, typically as 6 instances. It is about 40 residues long and resembles the WD repeat and other beta-propeller structures. The repeats have a catalytic activity in Peptidyl-glycine alpha-amidating monooxygenase; proteolysis has shown that the Peptidyl-alpha-hydroxyglycine alpha-amidating lyase (PAL) activity is localized to the repeats. Tripartite motif-containing protein 32 interacts with the activation domain of Tat. This interaction is mediated by the NHL repeats.	1.05179e-14
NZ_CP006003.1\|WP_082165105.1\|3409268_3412040_+\|DUF4157-domain-containing-protein	gnl\|CDD\|379338	pfam13699, DUF4157, Domain of unknown function (DUF4157). This presumed domain is functionally uncharacterized. This domain family is found in bacteria, archaea and eukaryotes, and is approximately 80 amino acids in length. This domain contains an HEXXH motif that is characteristic of many families of metallopeptidases. However, no peptidase activity has been shown for this domain.	1.01236e-36
NZ_CP006003.1\|WP_046712435.1\|3415004_3415832_-\|UDP-galactose-lipid-carrier-transferase	gnl\|CDD\|274737	TIGR03709, PPK2_rel_1, polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which. [Central intermediary metabolism, Phosphorus compounds].	2.0724e-116
NZ_CP006003.1\|WP_046712446.1\|3439441_3439798_-\|hypothetical-protein	gnl\|CDD\|377431	pfam04965, GPW_gp25, Gene 25-like lysozyme. This family includes the phage protein Gene 25 from T4 which is a structural component of the outer wedge of the baseplate that has acidic lysozyme activity. The family also includes relatives from bacteria that are also presumably lysozymes.	3.71682e-17
NZ_CP006003.1\|WP_052770939.1\|3412875_3414492_-\|hypothetical-protein	gnl\|CDD\|372403	pfam12947, EGF_3, EGF domain. This family includes a variety of EGF-like domain homologs. This family includes the C-terminal domain of the malaria parasite MSP1 protein.	1.58979e-10
NZ_CP006003.1\|WP_046712445.1\|3436839_3439440_-\|putative-baseplate-assembly-protein	gnl\|CDD\|274051	TIGR02243, hypothetical_protein_SCD8A.17c, putative baseplate assembly protein. This family consists of a large, conserved hypothetical protein in phage tail-like regions of at least six bacterial genomes: Gloeobacter violaceus PCC 7421, Geobacter sulfurreducens PCA, Streptomyces coelicolor A3(2), Streptomyces avermitilis MA-4680, Mesorhizobium loti, and Myxococcus xanthus. The C-terminal region is identified by the broader model pfam04865 as related to baseplate protein J from phage P2, but that relationship is not observed directly. [Mobile and extrachromosomal element functions, Prophage functions].	4.84607e-54
NZ_CP006003.1\|WP_046712443.1\|3426586_3427954_+\|peptidase-S74	gnl\|CDD\|240612	cd12820, LbR_YadA-like, YadA-like, left-handed beta-roll. This group contains the collagen-binding domain virulence factor YadA an adhesion proteins of several Yersinia species, and related cell surface proteins, including Moraxella catarrhalis UspA-like proteins. The collagen-binding portion is found in the hydrophobic N-terminal region. YadA forms a matrix on the bacterial outer membrane, which mediates binding to collagen and epithelial cells. YadA inhibits the complement-activating pathway with the coating of the cell surface with factor H, which impedes C3b molecules. These domains form a left handed beta roll made up of a series of short repeated elements. UspA1 and UspA2 are part of a class of pathogenicity factors that act as cell surface adhesion molecules, in which N-terminal head and neck domains extend from the bacterial outer membrane. The UspA1 head domain of Moraxella catarrhalis, is formed from trimeric left-handed parallel beta-helices of 14-16 amino acid repeats. The UspA1 head domain connects to a neck region of large extended, charged loops that maybe be ligand binding, which is in turn connected to an extended coiled coil domain that tethers the head and neck region to the cell surface via a transmembrane region.	1.13826e-19
NZ_CP006003.1\|WP_046712437.1\|3418156_3419722_+\|aspartate-ammonia-lyase	gnl\|CDD\|274045	TIGR02231, Hypothetical_protein_ZK1055.6b, conserved hypothetical protein. This family consists of proteins over 500 amino acids long in Caenorhabditis elegans and several bacteria (Pseudomonas aeruginosa, Nostoc sp. PCC 7120, Leptospira interrogans, etc.). The function is unknown.	5.11806e-114
NZ_CP006003.1\|WP_046712438.1\|3419832_3420420_+\|2OG-Fe(II)-oxygenase	gnl\|CDD\|214780	smart00702, P4Hc, Prolyl 4-hydroxylase alpha subunit homologues. Mammalian enzymes catalyse hydroxylation of collagen, for example. Prokaryotic enzymes might catalyse hydroxylation of antibiotic peptides. These are 2-oxoglutarate-dependent dioxygenases, requiring 2-oxoglutarate and dioxygen as cosubstrates and ferrous iron as a cofactor.	3.05841e-18
NZ_CP006003.1\|WP_046717745.1\|3434263_3436831_-\|putative-baseplate-assembly-protein	gnl\|CDD\|274051	TIGR02243, hypothetical_protein_SCD8A.17c, putative baseplate assembly protein. This family consists of a large, conserved hypothetical protein in phage tail-like regions of at least six bacterial genomes: Gloeobacter violaceus PCC 7421, Geobacter sulfurreducens PCA, Streptomyces coelicolor A3(2), Streptomyces avermitilis MA-4680, Mesorhizobium loti, and Myxococcus xanthus. The C-terminal region is identified by the broader model pfam04865 as related to baseplate protein J from phage P2, but that relationship is not observed directly. [Mobile and extrachromosomal element functions, Prophage functions].	3.20676e-38
NZ_CP006003.1\|WP_046712436.1\|3415963_3418141_+\|DUF4139-domain-containing-protein	gnl\|CDD\|379285	pfam13598, DUF4139, Domain of unknown function (DUF4139). This family is usually found at the C-terminus of proteins.	4.88204e-31
NZ_CP006003.1\|WP_046712439.1\|3420429_3422016_-\|oxidoreductase	gnl\|CDD\|235736	PRK06196, PRK06196, oxidoreductase; Provisional.	6.97297e-12
NZ_CP006003.1\|WP_046712441.1\|3424418_3425648_-\|histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	8.54196e-47

>NZ_CP006003.1|WP_046712439.1|3420429_3422016_-|oxidoreductase
MKDAETTSPALDAAPPPEAHASLDEVRRCTRLLEAMAEDRILLAKLPEEDKRALLIAAGRIVMPDRTAKSRLEKALRREKRHDKQTKDREVRASTRIRTMRRAPIFNAPLLPAGEVPVEEGPERLLEVPRKCYVCKAEYRKLHFFYDAMCIECADFNYAKRTQRAPLSGKVALITGARVKIGFQASLMLLRSGATVIATTRFPQDSARRYMLEPDFAEWSHRLHIHGLDLRHAPSVEIFARHIEQTHSRLDILINNAAQTVRRPPGFYAHLLDGELRRFEELPEAARPLLASHRACLTELSPALAAGGTEPSAALTASWRSHDPGLGIHSAAALSLVPYALENEGDTSALFPQGRLDADEQQVDLRDMNSWRLKLADVSTSEMLEVHLVNAVAPFILCGKLKPLMTRNRTTPGHIVNVSAMEGSFSRGTKTDRHPHTNMAKAALNMMTLTSAADYAKDRIYMNAVDTGWVTDEDPAVFSQRKVEDLDFQPPLDIIDGAARIIDPVTTAENTGDYSWGNFFKDYRLTNW
>NZ_CP006003.1|WP_046712438.1|3419832_3420420_+|2OG-Fe(II)-oxygenase
MSPLLPDPDRALGEANPLVITLEDLLNEDECQELVERIEALGPSAAPVTTSQGMVMRPDLRNNSRVMFDDPALADLLHQRILTHVPRRLERTWELCGANERLRCYRYEAGEYFAPHYDGAFVRDRNERSLLTYLVYLNDGAQGGATNFLDLGRSVTPRRGMGLVFNHHLYHEGATVTGGLKYVVRTDLMYRRALA
>NZ_CP006003.1|WP_046712437.1|3418156_3419722_+|aspartate-ammonia-lyase
MTLFPLSLLVLAAAPQVSSVVVYPDRAHVTRTQDVTCRGATTAVFEHVPEAASRESFRARAPGADLEGLTAERQTLEQQLAAERREWKSRWEVLGQEELALDAASERVGTLERLSEGYTDVAVDHVTRELTGRKPDTRAWASAFDAALSVRMRAVKESWELAEKRRELKQRRDQVSAQLSRLGTEASRAEYRVEVRLSCPEGKKTRVSLTYLVGGSSWEPSYEARADEASGTVELTALATVRQQTGEDWSGAKLLLSTALPRKNATPPEMAPLLVRALKQPKERQVLTARQEARQSVEGGVEGAASSGEGPRAVSQGVSVQWEAEEAARVPGDGVAVRVVLGRHRLPAEFSWRTVPKLHPVVFRVARLANTTSFPLLPGEVSLFRGTGFLGRQRLERVASGLPFELTFGIEEALRVTRTTVEEVKRPQGLFGGKQRFRYAYRFQLTNLRERAEKVVLSEHIPVSELDDVKVEVAPESTAGLSLTKDDGIATWQVALAPAETRTLELVFHVDAPSSYVSGGL
>NZ_CP006003.1|WP_046712436.1|3415963_3418141_+|DUF4139-domain-containing-protein
MLLLGLGWAVSQLLHASTEAPITDVTVYSDRARVVRTVSLQVSGTERLELPLLPEAVDPDSIQVEAEGARVASVEVRAAQPSPFPVTEATRLLSTLDRLGDELSRVSAEHVAHQRQVAALGRIQPKEPGEDSDGANGALAPGGWSASAAFLVDLRTKREARMRELEARMQVLRNELDDRQVDAGRLGALPSPRGFEVRVALTGSGAAKVRLSYLVLQQARWYPRYELQLNPAQQRVQVAFSGLVSQETGEDWTQARLTLSTALPSTFTALPKLTTWKLGTVERFIPTARRTDELPSEPPPLPRPVTPLDVVAELRRELQTRAQGKGAPRPPQKVVQASRPAPTPTESREPAPGSSRPSPTARVAPGGDAFVLGNVIDAQSRTPVGDVVVTATSPSLPGEEVTVTDAQGIYRLPPLPPGVYTLRFEKEQFKPYARSDIQVWMQRTVRVNVELLPESLGEVVEISGGPPTIDVASTSTGVGFSLHGASTSDWRPEPVVDRYVGLAPPPGWRRPALDSQLPASLAGGHDLAFTAPRVETVPSGQGERTIPLLLESWPVQVERRVFPALASEAYLVARLKSPSRSALPGGTASLFVGDDPSGTASLPLIVPGEPFTLPLGMDPAVRTARDVRLVQSKEGFISKDDLNTYEVTLEVSNPYPFAMQTHVVDQWPLGWGGDVEATLVRTEPVASQDPKTGVLRWDVVVPASSKKTLTFEYRLKRPQNWKLTQ
>NZ_CP006003.1|WP_046712435.1|3415004_3415832_-|UDP-galactose-lipid-carrier-transferase
MQLITSASLGAKVRLEKLPTTPPKHEQKTDAKAEFEALGEELFDLQDLMWGSRLNSVLIVLQGRDTAGKDGTIKHVVGSLNPRGVSVASFAAPTLEEREHDFLWRIHRHTPRLGETAIFNRSHYEDVLAVRVHELAPPSLWKERYGHIQDFEEMLVEHGTLVLKFFLHISREEQEQRLMDREKEPRKAWKISAGDWEDRKHWADYTRAYQDVFARTSTKQAPWCIVPSDAKWYRNLVVARAVVAALRPHRERWQARLDALGAEKKAELKAWRRKR
>NZ_CP006003.1|WP_052770940.1|3414442_3414769_-|hypothetical-protein
MERDMEFSRTATMWRMLGAVLLCTVLGACGANPQEEETPEGESESPLEDAQSEESAELAVVDPYADAATPSGLNVVLNPNNAVGAPRRPARHRALHPRRLAAPGHGPG
>NZ_CP006003.1|WP_052770939.1|3412875_3414492_-|hypothetical-protein
MLSILGGSLLLDMGQGEEGRGPLRIHYGGLTLTVLFTVDFLSADRTVIATGQANLIQLGVGRFSVDIPYSNATPYRYVRLNRALAGLYLIDAVETTGPLCGDGRLSTGESCDDGNRTANDGCSTICQVEPGYTCQGSPSVCTDVNECTNGTAQCSVNATCTNTPGSYTCTCKAGYSGNGRTCNDVNECTNGTSQCSTNATCTNTPGSYTCACKAGYSGNGRTCYDINECTNGTAQCSVNATCSNTQGSYNCSCKAGYSGDGRTCNDINECTNGTSQCSVNATCSNTQGSYTCACKTGYTGNGRTCNDINECTNGTSQCSVNATCSNTQGSYNCTCKAGYSGNGRTCNDINECTAGTHTCTPGQRCVNQPGGFDCIPGSCPPPQVKCGSACVNANTDPANCGCCGNTCGAGKTCTNGVCGARAPQGSPLGVTASWEREQDQDLIVRTPNGELLAYGPAKAGALAPSGPEGTPPSGTYFICLKSTSFEASPTDDTPVPYSLTVKRQGQADHVLRGVFLGADADSLCGADHPALIEAIIYP
>NZ_CP006003.1|WP_046712434.1|3412052_3412775_+|hypothetical-protein
MAEVKWTASSQHHDWNDRRAPAAFIDALAEAGLVGAVEGVCGWDEDATRRTVKLQGPGVGARVMAEIPKKEKHPFLKAWGSTPSPWTLTVGISRFVADEGRVAGLNTFVFQFDGAAYEDEAGSALLLAAFHAAHSPDTTEFAAIHPLARYEALQTGEYDSAVTLRPMFAGVFWASFLGKGHVEQFDRAVLARLPPERVEWVDGGKGLFVVTTPRLGDATTPAVEAQMLRLTEVFREARRR
>NZ_CP006003.1|WP_082165105.1|3409268_3412040_+|DUF4157-domain-containing-protein
MRRSAARVHASHSSETRGSAPASRPLASVATQAVAARAVGEPGVVAPGVRFDFSRLPLTPSVQRVACAGGACGCSSCEKKKEEVARAAQPGVPGVGPSEHVSAHVARGLGAGQPLESSARAFFEPRFGHDLGGVRIHTDARAADSARALQARAYTVGSDIAFQEGAYSPSTHAGRRLLAHELTHVLQQTGGRATSGARLARFATGGLSVTSPGDASEREAESMADAVMADGATHEPGRHRLGVARDFSPAPASKYTVPSPPAPPTPPPLTTTSDVPPTQSGTPINKNGLVAAEEGVNLRASPDTGSAPLERLPQNTRMFVSREQSGGWYFVMLVDGRFGYVAKSHVTVDMPDPEAKLYRIASGETALDIVKRFYKSDATKWGQDERFFVNVLVFVNAERGRKGIFKPDPEGDWDTTQTHAGSQIWIPGVEFAKALKGQVSSGSITYEAYQKVKNVITAIGEFLAGSIAFVAGLLHGVLESLWDTLVGLVDLAKLAGKLVWSLVTGNLLSDIRGFFSDLSKLDFKQLVSAGLDALDKKWNDPSILKRWHFRGWITGYALAEIVMLFFSGGALTALKGAGKAGKFAQFLAKMPRAAKFLEKAAEAAKGLKEAESLRKGMKALTTARDWAVRVLKVPGHILQNLSAEALERLKRLPQWAIERFSELSDVAKARVLGCASPCKVDLGAIQKYLAELAAKGATGAKKLTTPESVLVALPKDLNIGKIKKYLDEYPALMELIRKADLTDLDLAKLADFMTDADKLNPKSAYQTFTRYLTLVVPSKTGGDIGAFNKIVEAVVKADPRQGAALKGPMFEAFARTHLQEFAGKAFTRETFTVPGGKRRTADRFFADKGELWEVKHQLTDKVPPGQVDDYLSFLGTKGNSTGAEVKSLNYLFPTEDAAKLNSALKARGITVWYVKQPNVLTKL
>NZ_CP006003.1|WP_046712433.1|3408566_3409052_-|hypothetical-protein
MKRILTFVLAVFVLGCSGSESPELEELGQQSSELAAGYVTASPSTVRINLDRTNTGTTNVCWSTTGVSTAEVWLSLNGQSEVLFTRAPSGCADATWITAGNVFEFRLYAEMTHTTLLGFATVVGEGYRGGTQPPGCPSSCIPNYHCCVGERFCKPNTQACN
>NZ_CP006003.1|WP_046712440.1|3423007_3424387_-|hypothetical-protein
MDGPPSPTPRDSVDPWRLPLCCLAAAVVLALTLQLSNGTLFDSALRGLTLALGLSLLAVVGPGVSRPWTWGEAALALGLGIGLLLQLQVLLTDYPSSALRLQGPWPFALFHERLVAAALISGALLAGPDWLRKVGVPALLGVYLLLGLWILRHAPSPHIDVLVFQVQGADELLRGQNPYAMTFPNIYGHGHWYGEGLVRDGRLLFGFPYPPLSLMFATLGRALATDPRHAQLVATALAAGLMAWTRGGRLGAGAAALYLLTPRGFFVLEQSWTEPFLVLLLSATVFCAVRFPRALPYVFGLTLAIKQHTVFLLPLALLLLPEPRKQLWGLLWRAGATALAVSLPFALPDPKAFFHSVVALHIHQPFRVDSLSYLAAWVARGHPTPPLWIPFAAVAAALGLSLWRAPRTPAGFAAATALTYATFFAFNKQAFCNYYYFVVATLCLAVAAARLPSAPTPAR
>NZ_CP006003.1|WP_046712441.1|3424418_3425648_-|histidine-kinase
MLVAQDTTRSAPSQSSPASGITPDVQAIARIDAVKTVLRVLLQTTGLRLAVVARVTALEWRCCAVLDEMGFGLKPGDTLAITTTFCNTVRTSATPLLVNHASQEPCFSSHPAPRLYGVESYIAVPLYRRDGTFFGVMCALDSNPAALPQDKLEIFRHLGDLIGHQLENQDELERSEAQLFSEKEAAVLREQLLGIVSHDLRNPLNAILMSAATLVRRTDLDERARRAVRRIVDSADRAQRLIRDLLDFTQARMGQVLPVDRQPLDLHELTQQVAEEVQAVAPERVLEVRTQGIGRGAWDADRIAQVLHNLLANAMQYSPPGARIQVSSEAHDQELVLRVHNDGPPIPLEVLPTLFEPMKRGTTNGAERRSVGLGLFIVDQIARAHGGSVEVASTQAEGTTFSVHLPRRG
>NZ_CP006003.1|WP_046712442.1|3425767_3426499_+|hypothetical-protein
MRSALFVLLLLTMGACRRKEAPRIEQVGPAELTHQRSCEWLDWENNSCRADSVLRAGEVRFEQVTFVEANPSATRALVGQLDGSGSLVDLRSGDVLLRFPPHTSKREWCDDSRLVVSSPLADFGSSQGLLGTSLEVVWFDPSAAVQRAVLHRGLRAVPRLACGPGGSLAFIVSGTRGEAPIELYRWSPEEGSKLLETWAGEVENGDSSDLDISWNSSGQPEWCAWVRPYSVNRCVPPVRPVAR
>NZ_CP006003.1|WP_046712443.1|3426586_3427954_+|peptidase-S74
MKTRMLCATLGALALGAVGCGDDAPPAKSWEVGSGLRLDDGDVVSVVYGSGPGTVAEGNDSRLTDARAPLPGSTSYIQNGTEPQQASLSLTGSATTTAGHFVDAAAAVAQPVPLLRVTNTSTTPAWTALPLLSVDSAGGLVARGELEQGALPTSGPGLRLMWAPSKGAFRAGFAQTTQWDEDNVGVYSWAGGANSRASAYGSFSFGDACVASGVVSTCFGSSNQATGSASFASGAASTASGFTSVAMGYTNNATGQGSVALGYRVDANADYSTAMGQRASSGGFKGSFIWADQSTTSVISNTAEHQFLVRASGGIQLRTNATATTGCNLPAGSGVFTCTSDRNQKEDFRTVDGEQLLEKVARLPVESWRYKEEALGVRHVGPVAQDFRAAFGLGTDDTSIGMLDIDGVNMVAIQALERRTRQLRERDAEVDALKAELAELRRGLAELKAAMPRAR
>NZ_CP006003.1|WP_052770942.1|3428012_3432068_-|hypothetical-protein
MKGDFSRNTFRPAKHYSTVRMQQGRVQLDADWNEHVDIQQYLDQTTRRDVIGHSGTPQQPGTPAEQTGFALFTQGTRPFVRAGRYYVEGVLCENEQAVALDEQPDLPGFTLPVANGRYLAFLDVWQRHVTALEDPELREVALGGPDSATRTRTVWQVRLLRLTGTNASGPIEGVPCHTFGTPEWLPDELTSTGTLAARGEPEQASDNPCIVAAEAGYRRLENQLYRVEVHRGNTGGGTATFKWSRDNGILFTKVESVDVLNRRMVVTEPGKDGYRRFQPNQWLELTTEERVLRGEPGELIRVESMTGNRITIDAATWPAVMPSGVLTVRGWDNVGPAGALDIVPAPADPSLGWTSLESGVQVRFTAGRYRTGDYWLIPARTVTRNVLWPQDGGLPASEPAHGIRHHYCALAVLERNSDGWHVHDCRNLFPPLTEHKTLVYAGGDGQEVLPARPPAPPSRLARPLRAGVFNGRIPVVGARVQFSVVLSEGQGTVADVNLPDDPQTTIVVYTDASGIAEVFWTPAIDGWQTENDPRHSQVVEARLLDHGNEAIHAPLRYFASLSVSSKVAYNPDDAQEILNDTHTVQQALDTLSRQLVLTYEGGDGQEVLPGERLPHPLRVGVARHQRRAANQSVRFRVLSGAGGQYTGVRLAGSGNPWTESIVVTTGDDGLALVEWLPNPNDVTQQVEARLLVSEGGPLVEAHLPLVFTARLSLANRVAYQSGGCQTLLNADTVQEALDTLCRQRTFLYLGGDGQEGAPLQELPTPLMVAVMQGENPVANALVHFRIIQVADGARLRPAEGTGTPGASLLVRTNAQGIAAALWTLSNAPTQRVSAQLVEDAQTPTRVPPILFNARSTVSVAAEPSVKVTRVEMASNSDLPIENDSIVEFDPFVALSQGIRIICSEELAPLMSPAGAPLPLPRPVVSLSVEINYPLTTHDSTWWREQMGRLVGIVGHQTFELRGEARIFGTDIVWVPALESYRWLNQLRVYDTEDRTNPRMLAKLRIRGGYIHSRDGSRVMDGEVISRSLSQRFAAGLPNRGDGRQGGDFELWFWIRCFTNSPPGIAPGTLGTRTLTASSTVTSALEQPWGLARDAKRQELLVADTGANAVARLSLENHAAVGKLEKDLEQPTALVLDARRDELYVANAGSDSVAVFRRDDQGGFQPARVLAGKKTGLSGPLGLALDAEHQRLFVAGSGKGQATGLTAGPKGGRGAYLALFDAQAQGDTAPRARWTGEQLKLNRAAGLAWDAVHEELYVADYGADAVSVYSLASLLDTKAAAVKPLRVLQGKATGLSQPTGLSLDASGEELWVANARTNSITVYARDAAGNTAPLRTVEAPSESGKSLRAVLP
>NZ_CP006003.1|WP_046712444.1|3432077_3434267_-|hypothetical-protein
MTPSPRDRLYKLLPAIHRAKDTLQGEPLRALLAIMEHELLALEEDIGQLHDNWFIETCQEWVVPYIGDLLKVRDLVPVDPGLFSQRAYVANTLAYRRRKGTAAMLEQLARDVTGWPARAVEFFQRVGTTQYLNHPRLTSLRTPDLRDANALELVGTPFEDATRTVDVRHIDNQRGQHNLPNVGLFLWRLESYPVVLAPAYRVLPASEPGATVEGLFRFDALGCDTHLFNLPQSETTLSSLAGELNVPTPLRRRPLYDELEARRAALARGQTPEQRYFGATPPFTLHLDAGPGTFEAISPDEVLICDLSTWHRPPATLPYPPLDPSLPPVNRSIRVAVDPVNGRLAFAEGLPVPATLSVSYAYGFSSEVGGGFYDRQETLLPLEQRGAWRVDTRVGPYTTLASALSASGASGDALVEVLDSERYPLATLDVAAGSRLELRAANLQRPVIDLQGGRGLVRLGAGATLVLSGLLVRGGVLEVQAADNATLDLRHCTLVPGQDLLPDGQPRTTGPSLVVKGEKDGDCTVLLHRCITGPVRTGRATVLRLEDCIVDGLGGPALQGLPIPPGPLLPSEEDLEAEGLTGTLHVLASTVLGTVETTVLELASDSLFTGRVNVVQRQKGCMRFCYVPPGSHVPQRFRCQPAYAEDTPEDVRLEIERRVKPVFTSDRYLEPGYCQLRDDTDSGIRRGASDEGEMGVFHHLQQPQREANLRASLTDYLRFGLEAGFFFVT
>NZ_CP006003.1|WP_046717745.1|3434263_3436831_-|putative-baseplate-assembly-protein
MKDSGDCDACESQAATEAAPLYNRPGQPALAYRIGTHSRFFQRMLARLPREFLPDGEFAGTRPLAALSTRGTEDLSIAMLDAWATAADVLTFYQERIANEGFLRTATERRSVLELARQLGYELKPGVAASTYLVFTVETAPGAPSRVQVPVGVQVLSIPGQDARPQTFETTEALEARAEWNLLRVPRTQPQPLMRGEDTLYLRGLQPGIQPGDALLLVGEERESQPGSEQWDLRWVKTVKQVSNPKEPELNHTVVTWEPGLGSESPRMDPADHPRAFVLRLRGNLFGYNAPSFKAMPDEVKQRYNPDYRPGDARFTQWPQFENTTAVQGIVDLDREYPTLVHGSWVALWKSRYLELYRITDIQPWAREDFTMTAKVTRLTFDTNEHLSYFPLRSTVVLAQSEELPIGEMPRTDAVQGDSIELDRAVAGLEPKHVLLIEGRTLVDGQSGEWLRQVVALDRAEALPDGRTRLVLQEPLAAPLARDTVLIHGNVAPSTHGETVREVLGGGDGSRTHQRFVLRKPPLTYVAAPTDTGGESTLEIRVNGVLWKEVPTLFGQDERAEVYMVRLQDDGAVVVTFGDGVSGARLPTGQENITAVYRSGIGPEGEVDSGQLALLKVRPLGIREVNNPLPATGAAAPESRDEARDNAPASVLTLRRVVSLQDYEDFASTFAGIGKAQAADLTNGERILVHVTVAAHNGEPVEPGTQLHESLEEALRAHHDPVRQFALSSYERIHFAVEARLRLDARYLPEDVLARAEAALREAFSFERRQFAQAVSGAEVIRVLQDVPGVVMVDLERLHPTTPFIPEQKLFSVIRARGARWERTLLRPAQLLLLDPSLQGERRGVTLVHDLEVSP
>NZ_CP006003.1|WP_046712445.1|3436839_3439440_-|putative-baseplate-assembly-protein
MGARYVCQSEQRRRLVEAHPTFNGIDYLEVLDEEAATLELERQRTLWVRCYKPLPVNISADNVGITGGVRLKDIGVALAFRMDQPPPEPRTTQAERDEYARRVALDVENGTTETQQTLVVRTTSSGDFSTYTLALLRGFLDTVPLEGFDALLSRVDFTFKVECPSEFDCAPPKSAVTPDGVDPTIDYLTRDYASFRRLLLDRLSEVAPQWKERNPADLGVTLVELMAYSADYLSYYQDAVATEAYLGTARKRTSVRRHARLLDYPMHDGGNARAWVTVSLTPDAEGTPLAGPTEVTPGTVFITTVDAPRVVDARQLQAAIVSGAEVFESLHPTTLYSGHGRITFHTWGEDRCCLPKGATAATLLNPPSPADPTKKTFTPENFSEGKVLILEEARGSSTGRAVDADPSRRHAVRLTEVAFGEDPLLGVDVVEVSWHTEDALPFELCLWTVTVPHDSTGEKEDVPGQPAPVSVARGNVVLVDHGRTLTEELPAVPETGGYRPRLSRGPLTQVSRVEGGRAVDPTASATSALRSAPEEALPALWLREAESGRVWVPRRTLLNSGRFSRELVAEVEDDGRARLRFGDNVLGERPGAGVGMTATYRIGNGGAGNVGAESISHVYSPVGGAWRDAILRVRNPLPARGGVEPEAVERVRIDAPQAFRIQQRAVTEEDYAEVAQRHPEVQRAVGSLRWTGSWHTMFITVDRRGGFPVDVDFSERLTTFLERFRLAGYDLRVDAPLFVPLDIAMTVCVLPGYLAANVKAALLEVFGNGELPDGRRAFFHPDNFTFGEPVYLSQLVATAMKVPGVAWVETEDAPGKPQRFRRFGQVPRDEWKNGLIAMDRLEIARLDNDPSQPENGKLDFYMQGGL
>NZ_CP006003.1|WP_046712446.1|3439441_3439798_-|hypothetical-protein
MHIAFPYRLDGRGRTADADLDTHVRHLIEQVLFTAPGERVNRPTFGTGLGQLVFAPNSSELATATQFLVQGALQQWLGDLIQVEAVETHSEEASLQVTVRYVVRRTQQRQTAQFSREL
>NZ_CP006003.1|WP_046712447.1|3439801_3440125_-|hypothetical-protein
MGAFVVHVGATVMCPHGGQVQTMPGNPRVKVGGQFVATMADQYLVTGCTFPPQSGGPCVQVKWMVPSVRVRVGGQFVILQNSVGMSMGAAPLGPPQVVMTQVRVRGT

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Crispr_ID: NZ_CP006003_13

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP006003_13

3422170-3422250

Orphan

Consensus_repeat	Method
CCACGTCCCCGGAGCCCTCGAGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP006003_13

>merge|NZ_CP006003|13|3422170-3422250|CRISPRCasFinder
CCACGTCCCCGGAGCCCTCGAGCGAGACCTTGACGCTGCCCCCCTCGACGCTGGCCGCCACGTCCCCGGAGCCCTCCAGCC

>NZ_CP006003|13|11|3422170-3422250|CRISPRCasFinder
CCACGTCCCCGGAGCCCTCGAGC	GAGACCTTGACGCTGCCCCCCTCGACGCTGGCCG
CCACGTCCCCGGAGCCCTCCAGCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP006003.1\|WP_052770942.1\|3428012_3432068_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|271320
NZ_CP006003.1\|WP_046712434.1\|3412052_3412775_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_082165105.1\|3409268_3412040_+\|DUF4157-domain-containing-protein	unknown	unknown	gnl\|CDD\|379338
NZ_CP006003.1\|WP_046712435.1\|3415004_3415832_-\|UDP-galactose-lipid-carrier-transferase	unknown	unknown	gnl\|CDD\|274737
NZ_CP006003.1\|WP_046712433.1\|3408566_3409052_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046712447.1\|3439801_3440125_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_052770939.1\|3412875_3414492_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372403
NZ_CP006003.1\|WP_046712445.1\|3436839_3439440_-\|putative-baseplate-assembly-protein	unknown	unknown	gnl\|CDD\|274051
NZ_CP006003.1\|WP_046712438.1\|3419832_3420420_+\|2OG-Fe(II)-oxygenase	unknown	unknown	gnl\|CDD\|214780
NZ_CP006003.1\|WP_046712444.1\|3432077_3434267_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046712437.1\|3418156_3419722_+\|aspartate-ammonia-lyase	unknown	unknown	gnl\|CDD\|274045
NZ_CP006003.1\|WP_046712446.1\|3439441_3439798_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377431
NZ_CP006003.1\|WP_046712442.1\|3425767_3426499_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046712443.1\|3426586_3427954_+\|peptidase-S74	unknown	unknown	gnl\|CDD\|240612
NZ_CP006003.1\|WP_046712441.1\|3424418_3425648_-\|histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_CP006003.1\|WP_046717745.1\|3434263_3436831_-\|putative-baseplate-assembly-protein	unknown	unknown	gnl\|CDD\|274051
NZ_CP006003.1\|WP_046712440.1\|3423007_3424387_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_052770940.1\|3414442_3414769_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046712439.1\|3420429_3422016_-\|oxidoreductase	unknown	unknown	gnl\|CDD\|235736
NZ_CP006003.1\|WP_046712436.1\|3415963_3418141_+\|DUF4139-domain-containing-protein	unknown	unknown	gnl\|CDD\|379285

Protein	Function_ID	Function_description	E-value
NZ_CP006003.1\|WP_052770942.1\|3428012_3432068_-\|hypothetical-protein	gnl\|CDD\|271320	cd05819, NHL, NHL repeat unit of beta-propeller proteins. The NHL(NCL-1, HT2A and LIN-41)-repeat is found in multiple tandem copies, typically as 6 instances. It is about 40 residues long and resembles the WD repeat and other beta-propeller structures. The repeats have a catalytic activity in Peptidyl-glycine alpha-amidating monooxygenase; proteolysis has shown that the Peptidyl-alpha-hydroxyglycine alpha-amidating lyase (PAL) activity is localized to the repeats. Tripartite motif-containing protein 32 interacts with the activation domain of Tat. This interaction is mediated by the NHL repeats.	1.05179e-14
NZ_CP006003.1\|WP_082165105.1\|3409268_3412040_+\|DUF4157-domain-containing-protein	gnl\|CDD\|379338	pfam13699, DUF4157, Domain of unknown function (DUF4157). This presumed domain is functionally uncharacterized. This domain family is found in bacteria, archaea and eukaryotes, and is approximately 80 amino acids in length. This domain contains an HEXXH motif that is characteristic of many families of metallopeptidases. However, no peptidase activity has been shown for this domain.	1.01236e-36
NZ_CP006003.1\|WP_046712435.1\|3415004_3415832_-\|UDP-galactose-lipid-carrier-transferase	gnl\|CDD\|274737	TIGR03709, PPK2_rel_1, polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which. [Central intermediary metabolism, Phosphorus compounds].	2.0724e-116
NZ_CP006003.1\|WP_046712446.1\|3439441_3439798_-\|hypothetical-protein	gnl\|CDD\|377431	pfam04965, GPW_gp25, Gene 25-like lysozyme. This family includes the phage protein Gene 25 from T4 which is a structural component of the outer wedge of the baseplate that has acidic lysozyme activity. The family also includes relatives from bacteria that are also presumably lysozymes.	3.71682e-17
NZ_CP006003.1\|WP_052770939.1\|3412875_3414492_-\|hypothetical-protein	gnl\|CDD\|372403	pfam12947, EGF_3, EGF domain. This family includes a variety of EGF-like domain homologs. This family includes the C-terminal domain of the malaria parasite MSP1 protein.	1.58979e-10
NZ_CP006003.1\|WP_046712445.1\|3436839_3439440_-\|putative-baseplate-assembly-protein	gnl\|CDD\|274051	TIGR02243, hypothetical_protein_SCD8A.17c, putative baseplate assembly protein. This family consists of a large, conserved hypothetical protein in phage tail-like regions of at least six bacterial genomes: Gloeobacter violaceus PCC 7421, Geobacter sulfurreducens PCA, Streptomyces coelicolor A3(2), Streptomyces avermitilis MA-4680, Mesorhizobium loti, and Myxococcus xanthus. The C-terminal region is identified by the broader model pfam04865 as related to baseplate protein J from phage P2, but that relationship is not observed directly. [Mobile and extrachromosomal element functions, Prophage functions].	4.84607e-54
NZ_CP006003.1\|WP_046712443.1\|3426586_3427954_+\|peptidase-S74	gnl\|CDD\|240612	cd12820, LbR_YadA-like, YadA-like, left-handed beta-roll. This group contains the collagen-binding domain virulence factor YadA an adhesion proteins of several Yersinia species, and related cell surface proteins, including Moraxella catarrhalis UspA-like proteins. The collagen-binding portion is found in the hydrophobic N-terminal region. YadA forms a matrix on the bacterial outer membrane, which mediates binding to collagen and epithelial cells. YadA inhibits the complement-activating pathway with the coating of the cell surface with factor H, which impedes C3b molecules. These domains form a left handed beta roll made up of a series of short repeated elements. UspA1 and UspA2 are part of a class of pathogenicity factors that act as cell surface adhesion molecules, in which N-terminal head and neck domains extend from the bacterial outer membrane. The UspA1 head domain of Moraxella catarrhalis, is formed from trimeric left-handed parallel beta-helices of 14-16 amino acid repeats. The UspA1 head domain connects to a neck region of large extended, charged loops that maybe be ligand binding, which is in turn connected to an extended coiled coil domain that tethers the head and neck region to the cell surface via a transmembrane region.	1.13826e-19
NZ_CP006003.1\|WP_046712437.1\|3418156_3419722_+\|aspartate-ammonia-lyase	gnl\|CDD\|274045	TIGR02231, Hypothetical_protein_ZK1055.6b, conserved hypothetical protein. This family consists of proteins over 500 amino acids long in Caenorhabditis elegans and several bacteria (Pseudomonas aeruginosa, Nostoc sp. PCC 7120, Leptospira interrogans, etc.). The function is unknown.	5.11806e-114
NZ_CP006003.1\|WP_046712438.1\|3419832_3420420_+\|2OG-Fe(II)-oxygenase	gnl\|CDD\|214780	smart00702, P4Hc, Prolyl 4-hydroxylase alpha subunit homologues. Mammalian enzymes catalyse hydroxylation of collagen, for example. Prokaryotic enzymes might catalyse hydroxylation of antibiotic peptides. These are 2-oxoglutarate-dependent dioxygenases, requiring 2-oxoglutarate and dioxygen as cosubstrates and ferrous iron as a cofactor.	3.05841e-18
NZ_CP006003.1\|WP_046717745.1\|3434263_3436831_-\|putative-baseplate-assembly-protein	gnl\|CDD\|274051	TIGR02243, hypothetical_protein_SCD8A.17c, putative baseplate assembly protein. This family consists of a large, conserved hypothetical protein in phage tail-like regions of at least six bacterial genomes: Gloeobacter violaceus PCC 7421, Geobacter sulfurreducens PCA, Streptomyces coelicolor A3(2), Streptomyces avermitilis MA-4680, Mesorhizobium loti, and Myxococcus xanthus. The C-terminal region is identified by the broader model pfam04865 as related to baseplate protein J from phage P2, but that relationship is not observed directly. [Mobile and extrachromosomal element functions, Prophage functions].	3.20676e-38
NZ_CP006003.1\|WP_046712436.1\|3415963_3418141_+\|DUF4139-domain-containing-protein	gnl\|CDD\|379285	pfam13598, DUF4139, Domain of unknown function (DUF4139). This family is usually found at the C-terminus of proteins.	4.88204e-31
NZ_CP006003.1\|WP_046712439.1\|3420429_3422016_-\|oxidoreductase	gnl\|CDD\|235736	PRK06196, PRK06196, oxidoreductase; Provisional.	6.97297e-12
NZ_CP006003.1\|WP_046712441.1\|3424418_3425648_-\|histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	8.54196e-47

>NZ_CP006003.1|WP_046712439.1|3420429_3422016_-|oxidoreductase
MKDAETTSPALDAAPPPEAHASLDEVRRCTRLLEAMAEDRILLAKLPEEDKRALLIAAGRIVMPDRTAKSRLEKALRREKRHDKQTKDREVRASTRIRTMRRAPIFNAPLLPAGEVPVEEGPERLLEVPRKCYVCKAEYRKLHFFYDAMCIECADFNYAKRTQRAPLSGKVALITGARVKIGFQASLMLLRSGATVIATTRFPQDSARRYMLEPDFAEWSHRLHIHGLDLRHAPSVEIFARHIEQTHSRLDILINNAAQTVRRPPGFYAHLLDGELRRFEELPEAARPLLASHRACLTELSPALAAGGTEPSAALTASWRSHDPGLGIHSAAALSLVPYALENEGDTSALFPQGRLDADEQQVDLRDMNSWRLKLADVSTSEMLEVHLVNAVAPFILCGKLKPLMTRNRTTPGHIVNVSAMEGSFSRGTKTDRHPHTNMAKAALNMMTLTSAADYAKDRIYMNAVDTGWVTDEDPAVFSQRKVEDLDFQPPLDIIDGAARIIDPVTTAENTGDYSWGNFFKDYRLTNW
>NZ_CP006003.1|WP_046712438.1|3419832_3420420_+|2OG-Fe(II)-oxygenase
MSPLLPDPDRALGEANPLVITLEDLLNEDECQELVERIEALGPSAAPVTTSQGMVMRPDLRNNSRVMFDDPALADLLHQRILTHVPRRLERTWELCGANERLRCYRYEAGEYFAPHYDGAFVRDRNERSLLTYLVYLNDGAQGGATNFLDLGRSVTPRRGMGLVFNHHLYHEGATVTGGLKYVVRTDLMYRRALA
>NZ_CP006003.1|WP_046712437.1|3418156_3419722_+|aspartate-ammonia-lyase
MTLFPLSLLVLAAAPQVSSVVVYPDRAHVTRTQDVTCRGATTAVFEHVPEAASRESFRARAPGADLEGLTAERQTLEQQLAAERREWKSRWEVLGQEELALDAASERVGTLERLSEGYTDVAVDHVTRELTGRKPDTRAWASAFDAALSVRMRAVKESWELAEKRRELKQRRDQVSAQLSRLGTEASRAEYRVEVRLSCPEGKKTRVSLTYLVGGSSWEPSYEARADEASGTVELTALATVRQQTGEDWSGAKLLLSTALPRKNATPPEMAPLLVRALKQPKERQVLTARQEARQSVEGGVEGAASSGEGPRAVSQGVSVQWEAEEAARVPGDGVAVRVVLGRHRLPAEFSWRTVPKLHPVVFRVARLANTTSFPLLPGEVSLFRGTGFLGRQRLERVASGLPFELTFGIEEALRVTRTTVEEVKRPQGLFGGKQRFRYAYRFQLTNLRERAEKVVLSEHIPVSELDDVKVEVAPESTAGLSLTKDDGIATWQVALAPAETRTLELVFHVDAPSSYVSGGL
>NZ_CP006003.1|WP_046712436.1|3415963_3418141_+|DUF4139-domain-containing-protein
MLLLGLGWAVSQLLHASTEAPITDVTVYSDRARVVRTVSLQVSGTERLELPLLPEAVDPDSIQVEAEGARVASVEVRAAQPSPFPVTEATRLLSTLDRLGDELSRVSAEHVAHQRQVAALGRIQPKEPGEDSDGANGALAPGGWSASAAFLVDLRTKREARMRELEARMQVLRNELDDRQVDAGRLGALPSPRGFEVRVALTGSGAAKVRLSYLVLQQARWYPRYELQLNPAQQRVQVAFSGLVSQETGEDWTQARLTLSTALPSTFTALPKLTTWKLGTVERFIPTARRTDELPSEPPPLPRPVTPLDVVAELRRELQTRAQGKGAPRPPQKVVQASRPAPTPTESREPAPGSSRPSPTARVAPGGDAFVLGNVIDAQSRTPVGDVVVTATSPSLPGEEVTVTDAQGIYRLPPLPPGVYTLRFEKEQFKPYARSDIQVWMQRTVRVNVELLPESLGEVVEISGGPPTIDVASTSTGVGFSLHGASTSDWRPEPVVDRYVGLAPPPGWRRPALDSQLPASLAGGHDLAFTAPRVETVPSGQGERTIPLLLESWPVQVERRVFPALASEAYLVARLKSPSRSALPGGTASLFVGDDPSGTASLPLIVPGEPFTLPLGMDPAVRTARDVRLVQSKEGFISKDDLNTYEVTLEVSNPYPFAMQTHVVDQWPLGWGGDVEATLVRTEPVASQDPKTGVLRWDVVVPASSKKTLTFEYRLKRPQNWKLTQ
>NZ_CP006003.1|WP_046712435.1|3415004_3415832_-|UDP-galactose-lipid-carrier-transferase
MQLITSASLGAKVRLEKLPTTPPKHEQKTDAKAEFEALGEELFDLQDLMWGSRLNSVLIVLQGRDTAGKDGTIKHVVGSLNPRGVSVASFAAPTLEEREHDFLWRIHRHTPRLGETAIFNRSHYEDVLAVRVHELAPPSLWKERYGHIQDFEEMLVEHGTLVLKFFLHISREEQEQRLMDREKEPRKAWKISAGDWEDRKHWADYTRAYQDVFARTSTKQAPWCIVPSDAKWYRNLVVARAVVAALRPHRERWQARLDALGAEKKAELKAWRRKR
>NZ_CP006003.1|WP_052770940.1|3414442_3414769_-|hypothetical-protein
MERDMEFSRTATMWRMLGAVLLCTVLGACGANPQEEETPEGESESPLEDAQSEESAELAVVDPYADAATPSGLNVVLNPNNAVGAPRRPARHRALHPRRLAAPGHGPG
>NZ_CP006003.1|WP_052770939.1|3412875_3414492_-|hypothetical-protein
MLSILGGSLLLDMGQGEEGRGPLRIHYGGLTLTVLFTVDFLSADRTVIATGQANLIQLGVGRFSVDIPYSNATPYRYVRLNRALAGLYLIDAVETTGPLCGDGRLSTGESCDDGNRTANDGCSTICQVEPGYTCQGSPSVCTDVNECTNGTAQCSVNATCTNTPGSYTCTCKAGYSGNGRTCNDVNECTNGTSQCSTNATCTNTPGSYTCACKAGYSGNGRTCYDINECTNGTAQCSVNATCSNTQGSYNCSCKAGYSGDGRTCNDINECTNGTSQCSVNATCSNTQGSYTCACKTGYTGNGRTCNDINECTNGTSQCSVNATCSNTQGSYNCTCKAGYSGNGRTCNDINECTAGTHTCTPGQRCVNQPGGFDCIPGSCPPPQVKCGSACVNANTDPANCGCCGNTCGAGKTCTNGVCGARAPQGSPLGVTASWEREQDQDLIVRTPNGELLAYGPAKAGALAPSGPEGTPPSGTYFICLKSTSFEASPTDDTPVPYSLTVKRQGQADHVLRGVFLGADADSLCGADHPALIEAIIYP
>NZ_CP006003.1|WP_046712434.1|3412052_3412775_+|hypothetical-protein
MAEVKWTASSQHHDWNDRRAPAAFIDALAEAGLVGAVEGVCGWDEDATRRTVKLQGPGVGARVMAEIPKKEKHPFLKAWGSTPSPWTLTVGISRFVADEGRVAGLNTFVFQFDGAAYEDEAGSALLLAAFHAAHSPDTTEFAAIHPLARYEALQTGEYDSAVTLRPMFAGVFWASFLGKGHVEQFDRAVLARLPPERVEWVDGGKGLFVVTTPRLGDATTPAVEAQMLRLTEVFREARRR
>NZ_CP006003.1|WP_082165105.1|3409268_3412040_+|DUF4157-domain-containing-protein
MRRSAARVHASHSSETRGSAPASRPLASVATQAVAARAVGEPGVVAPGVRFDFSRLPLTPSVQRVACAGGACGCSSCEKKKEEVARAAQPGVPGVGPSEHVSAHVARGLGAGQPLESSARAFFEPRFGHDLGGVRIHTDARAADSARALQARAYTVGSDIAFQEGAYSPSTHAGRRLLAHELTHVLQQTGGRATSGARLARFATGGLSVTSPGDASEREAESMADAVMADGATHEPGRHRLGVARDFSPAPASKYTVPSPPAPPTPPPLTTTSDVPPTQSGTPINKNGLVAAEEGVNLRASPDTGSAPLERLPQNTRMFVSREQSGGWYFVMLVDGRFGYVAKSHVTVDMPDPEAKLYRIASGETALDIVKRFYKSDATKWGQDERFFVNVLVFVNAERGRKGIFKPDPEGDWDTTQTHAGSQIWIPGVEFAKALKGQVSSGSITYEAYQKVKNVITAIGEFLAGSIAFVAGLLHGVLESLWDTLVGLVDLAKLAGKLVWSLVTGNLLSDIRGFFSDLSKLDFKQLVSAGLDALDKKWNDPSILKRWHFRGWITGYALAEIVMLFFSGGALTALKGAGKAGKFAQFLAKMPRAAKFLEKAAEAAKGLKEAESLRKGMKALTTARDWAVRVLKVPGHILQNLSAEALERLKRLPQWAIERFSELSDVAKARVLGCASPCKVDLGAIQKYLAELAAKGATGAKKLTTPESVLVALPKDLNIGKIKKYLDEYPALMELIRKADLTDLDLAKLADFMTDADKLNPKSAYQTFTRYLTLVVPSKTGGDIGAFNKIVEAVVKADPRQGAALKGPMFEAFARTHLQEFAGKAFTRETFTVPGGKRRTADRFFADKGELWEVKHQLTDKVPPGQVDDYLSFLGTKGNSTGAEVKSLNYLFPTEDAAKLNSALKARGITVWYVKQPNVLTKL
>NZ_CP006003.1|WP_046712433.1|3408566_3409052_-|hypothetical-protein
MKRILTFVLAVFVLGCSGSESPELEELGQQSSELAAGYVTASPSTVRINLDRTNTGTTNVCWSTTGVSTAEVWLSLNGQSEVLFTRAPSGCADATWITAGNVFEFRLYAEMTHTTLLGFATVVGEGYRGGTQPPGCPSSCIPNYHCCVGERFCKPNTQACN
>NZ_CP006003.1|WP_046712440.1|3423007_3424387_-|hypothetical-protein
MDGPPSPTPRDSVDPWRLPLCCLAAAVVLALTLQLSNGTLFDSALRGLTLALGLSLLAVVGPGVSRPWTWGEAALALGLGIGLLLQLQVLLTDYPSSALRLQGPWPFALFHERLVAAALISGALLAGPDWLRKVGVPALLGVYLLLGLWILRHAPSPHIDVLVFQVQGADELLRGQNPYAMTFPNIYGHGHWYGEGLVRDGRLLFGFPYPPLSLMFATLGRALATDPRHAQLVATALAAGLMAWTRGGRLGAGAAALYLLTPRGFFVLEQSWTEPFLVLLLSATVFCAVRFPRALPYVFGLTLAIKQHTVFLLPLALLLLPEPRKQLWGLLWRAGATALAVSLPFALPDPKAFFHSVVALHIHQPFRVDSLSYLAAWVARGHPTPPLWIPFAAVAAALGLSLWRAPRTPAGFAAATALTYATFFAFNKQAFCNYYYFVVATLCLAVAAARLPSAPTPAR
>NZ_CP006003.1|WP_046712441.1|3424418_3425648_-|histidine-kinase
MLVAQDTTRSAPSQSSPASGITPDVQAIARIDAVKTVLRVLLQTTGLRLAVVARVTALEWRCCAVLDEMGFGLKPGDTLAITTTFCNTVRTSATPLLVNHASQEPCFSSHPAPRLYGVESYIAVPLYRRDGTFFGVMCALDSNPAALPQDKLEIFRHLGDLIGHQLENQDELERSEAQLFSEKEAAVLREQLLGIVSHDLRNPLNAILMSAATLVRRTDLDERARRAVRRIVDSADRAQRLIRDLLDFTQARMGQVLPVDRQPLDLHELTQQVAEEVQAVAPERVLEVRTQGIGRGAWDADRIAQVLHNLLANAMQYSPPGARIQVSSEAHDQELVLRVHNDGPPIPLEVLPTLFEPMKRGTTNGAERRSVGLGLFIVDQIARAHGGSVEVASTQAEGTTFSVHLPRRG
>NZ_CP006003.1|WP_046712442.1|3425767_3426499_+|hypothetical-protein
MRSALFVLLLLTMGACRRKEAPRIEQVGPAELTHQRSCEWLDWENNSCRADSVLRAGEVRFEQVTFVEANPSATRALVGQLDGSGSLVDLRSGDVLLRFPPHTSKREWCDDSRLVVSSPLADFGSSQGLLGTSLEVVWFDPSAAVQRAVLHRGLRAVPRLACGPGGSLAFIVSGTRGEAPIELYRWSPEEGSKLLETWAGEVENGDSSDLDISWNSSGQPEWCAWVRPYSVNRCVPPVRPVAR
>NZ_CP006003.1|WP_046712443.1|3426586_3427954_+|peptidase-S74
MKTRMLCATLGALALGAVGCGDDAPPAKSWEVGSGLRLDDGDVVSVVYGSGPGTVAEGNDSRLTDARAPLPGSTSYIQNGTEPQQASLSLTGSATTTAGHFVDAAAAVAQPVPLLRVTNTSTTPAWTALPLLSVDSAGGLVARGELEQGALPTSGPGLRLMWAPSKGAFRAGFAQTTQWDEDNVGVYSWAGGANSRASAYGSFSFGDACVASGVVSTCFGSSNQATGSASFASGAASTASGFTSVAMGYTNNATGQGSVALGYRVDANADYSTAMGQRASSGGFKGSFIWADQSTTSVISNTAEHQFLVRASGGIQLRTNATATTGCNLPAGSGVFTCTSDRNQKEDFRTVDGEQLLEKVARLPVESWRYKEEALGVRHVGPVAQDFRAAFGLGTDDTSIGMLDIDGVNMVAIQALERRTRQLRERDAEVDALKAELAELRRGLAELKAAMPRAR
>NZ_CP006003.1|WP_052770942.1|3428012_3432068_-|hypothetical-protein
MKGDFSRNTFRPAKHYSTVRMQQGRVQLDADWNEHVDIQQYLDQTTRRDVIGHSGTPQQPGTPAEQTGFALFTQGTRPFVRAGRYYVEGVLCENEQAVALDEQPDLPGFTLPVANGRYLAFLDVWQRHVTALEDPELREVALGGPDSATRTRTVWQVRLLRLTGTNASGPIEGVPCHTFGTPEWLPDELTSTGTLAARGEPEQASDNPCIVAAEAGYRRLENQLYRVEVHRGNTGGGTATFKWSRDNGILFTKVESVDVLNRRMVVTEPGKDGYRRFQPNQWLELTTEERVLRGEPGELIRVESMTGNRITIDAATWPAVMPSGVLTVRGWDNVGPAGALDIVPAPADPSLGWTSLESGVQVRFTAGRYRTGDYWLIPARTVTRNVLWPQDGGLPASEPAHGIRHHYCALAVLERNSDGWHVHDCRNLFPPLTEHKTLVYAGGDGQEVLPARPPAPPSRLARPLRAGVFNGRIPVVGARVQFSVVLSEGQGTVADVNLPDDPQTTIVVYTDASGIAEVFWTPAIDGWQTENDPRHSQVVEARLLDHGNEAIHAPLRYFASLSVSSKVAYNPDDAQEILNDTHTVQQALDTLSRQLVLTYEGGDGQEVLPGERLPHPLRVGVARHQRRAANQSVRFRVLSGAGGQYTGVRLAGSGNPWTESIVVTTGDDGLALVEWLPNPNDVTQQVEARLLVSEGGPLVEAHLPLVFTARLSLANRVAYQSGGCQTLLNADTVQEALDTLCRQRTFLYLGGDGQEGAPLQELPTPLMVAVMQGENPVANALVHFRIIQVADGARLRPAEGTGTPGASLLVRTNAQGIAAALWTLSNAPTQRVSAQLVEDAQTPTRVPPILFNARSTVSVAAEPSVKVTRVEMASNSDLPIENDSIVEFDPFVALSQGIRIICSEELAPLMSPAGAPLPLPRPVVSLSVEINYPLTTHDSTWWREQMGRLVGIVGHQTFELRGEARIFGTDIVWVPALESYRWLNQLRVYDTEDRTNPRMLAKLRIRGGYIHSRDGSRVMDGEVISRSLSQRFAAGLPNRGDGRQGGDFELWFWIRCFTNSPPGIAPGTLGTRTLTASSTVTSALEQPWGLARDAKRQELLVADTGANAVARLSLENHAAVGKLEKDLEQPTALVLDARRDELYVANAGSDSVAVFRRDDQGGFQPARVLAGKKTGLSGPLGLALDAEHQRLFVAGSGKGQATGLTAGPKGGRGAYLALFDAQAQGDTAPRARWTGEQLKLNRAAGLAWDAVHEELYVADYGADAVSVYSLASLLDTKAAAVKPLRVLQGKATGLSQPTGLSLDASGEELWVANARTNSITVYARDAAGNTAPLRTVEAPSESGKSLRAVLP
>NZ_CP006003.1|WP_046712444.1|3432077_3434267_-|hypothetical-protein
MTPSPRDRLYKLLPAIHRAKDTLQGEPLRALLAIMEHELLALEEDIGQLHDNWFIETCQEWVVPYIGDLLKVRDLVPVDPGLFSQRAYVANTLAYRRRKGTAAMLEQLARDVTGWPARAVEFFQRVGTTQYLNHPRLTSLRTPDLRDANALELVGTPFEDATRTVDVRHIDNQRGQHNLPNVGLFLWRLESYPVVLAPAYRVLPASEPGATVEGLFRFDALGCDTHLFNLPQSETTLSSLAGELNVPTPLRRRPLYDELEARRAALARGQTPEQRYFGATPPFTLHLDAGPGTFEAISPDEVLICDLSTWHRPPATLPYPPLDPSLPPVNRSIRVAVDPVNGRLAFAEGLPVPATLSVSYAYGFSSEVGGGFYDRQETLLPLEQRGAWRVDTRVGPYTTLASALSASGASGDALVEVLDSERYPLATLDVAAGSRLELRAANLQRPVIDLQGGRGLVRLGAGATLVLSGLLVRGGVLEVQAADNATLDLRHCTLVPGQDLLPDGQPRTTGPSLVVKGEKDGDCTVLLHRCITGPVRTGRATVLRLEDCIVDGLGGPALQGLPIPPGPLLPSEEDLEAEGLTGTLHVLASTVLGTVETTVLELASDSLFTGRVNVVQRQKGCMRFCYVPPGSHVPQRFRCQPAYAEDTPEDVRLEIERRVKPVFTSDRYLEPGYCQLRDDTDSGIRRGASDEGEMGVFHHLQQPQREANLRASLTDYLRFGLEAGFFFVT
>NZ_CP006003.1|WP_046717745.1|3434263_3436831_-|putative-baseplate-assembly-protein
MKDSGDCDACESQAATEAAPLYNRPGQPALAYRIGTHSRFFQRMLARLPREFLPDGEFAGTRPLAALSTRGTEDLSIAMLDAWATAADVLTFYQERIANEGFLRTATERRSVLELARQLGYELKPGVAASTYLVFTVETAPGAPSRVQVPVGVQVLSIPGQDARPQTFETTEALEARAEWNLLRVPRTQPQPLMRGEDTLYLRGLQPGIQPGDALLLVGEERESQPGSEQWDLRWVKTVKQVSNPKEPELNHTVVTWEPGLGSESPRMDPADHPRAFVLRLRGNLFGYNAPSFKAMPDEVKQRYNPDYRPGDARFTQWPQFENTTAVQGIVDLDREYPTLVHGSWVALWKSRYLELYRITDIQPWAREDFTMTAKVTRLTFDTNEHLSYFPLRSTVVLAQSEELPIGEMPRTDAVQGDSIELDRAVAGLEPKHVLLIEGRTLVDGQSGEWLRQVVALDRAEALPDGRTRLVLQEPLAAPLARDTVLIHGNVAPSTHGETVREVLGGGDGSRTHQRFVLRKPPLTYVAAPTDTGGESTLEIRVNGVLWKEVPTLFGQDERAEVYMVRLQDDGAVVVTFGDGVSGARLPTGQENITAVYRSGIGPEGEVDSGQLALLKVRPLGIREVNNPLPATGAAAPESRDEARDNAPASVLTLRRVVSLQDYEDFASTFAGIGKAQAADLTNGERILVHVTVAAHNGEPVEPGTQLHESLEEALRAHHDPVRQFALSSYERIHFAVEARLRLDARYLPEDVLARAEAALREAFSFERRQFAQAVSGAEVIRVLQDVPGVVMVDLERLHPTTPFIPEQKLFSVIRARGARWERTLLRPAQLLLLDPSLQGERRGVTLVHDLEVSP
>NZ_CP006003.1|WP_046712445.1|3436839_3439440_-|putative-baseplate-assembly-protein
MGARYVCQSEQRRRLVEAHPTFNGIDYLEVLDEEAATLELERQRTLWVRCYKPLPVNISADNVGITGGVRLKDIGVALAFRMDQPPPEPRTTQAERDEYARRVALDVENGTTETQQTLVVRTTSSGDFSTYTLALLRGFLDTVPLEGFDALLSRVDFTFKVECPSEFDCAPPKSAVTPDGVDPTIDYLTRDYASFRRLLLDRLSEVAPQWKERNPADLGVTLVELMAYSADYLSYYQDAVATEAYLGTARKRTSVRRHARLLDYPMHDGGNARAWVTVSLTPDAEGTPLAGPTEVTPGTVFITTVDAPRVVDARQLQAAIVSGAEVFESLHPTTLYSGHGRITFHTWGEDRCCLPKGATAATLLNPPSPADPTKKTFTPENFSEGKVLILEEARGSSTGRAVDADPSRRHAVRLTEVAFGEDPLLGVDVVEVSWHTEDALPFELCLWTVTVPHDSTGEKEDVPGQPAPVSVARGNVVLVDHGRTLTEELPAVPETGGYRPRLSRGPLTQVSRVEGGRAVDPTASATSALRSAPEEALPALWLREAESGRVWVPRRTLLNSGRFSRELVAEVEDDGRARLRFGDNVLGERPGAGVGMTATYRIGNGGAGNVGAESISHVYSPVGGAWRDAILRVRNPLPARGGVEPEAVERVRIDAPQAFRIQQRAVTEEDYAEVAQRHPEVQRAVGSLRWTGSWHTMFITVDRRGGFPVDVDFSERLTTFLERFRLAGYDLRVDAPLFVPLDIAMTVCVLPGYLAANVKAALLEVFGNGELPDGRRAFFHPDNFTFGEPVYLSQLVATAMKVPGVAWVETEDAPGKPQRFRRFGQVPRDEWKNGLIAMDRLEIARLDNDPSQPENGKLDFYMQGGL
>NZ_CP006003.1|WP_046712446.1|3439441_3439798_-|hypothetical-protein
MHIAFPYRLDGRGRTADADLDTHVRHLIEQVLFTAPGERVNRPTFGTGLGQLVFAPNSSELATATQFLVQGALQQWLGDLIQVEAVETHSEEASLQVTVRYVVRRTQQRQTAQFSREL
>NZ_CP006003.1|WP_046712447.1|3439801_3440125_-|hypothetical-protein
MGAFVVHVGATVMCPHGGQVQTMPGNPRVKVGGQFVATMADQYLVTGCTFPPQSGGPCVQVKWMVPSVRVRVGGQFVILQNSVGMSMGAAPLGPPQVVMTQVRVRGT

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Crispr_ID: NZ_CP006003_14

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP006003_14

3422401-3422493

Orphan

Consensus_repeat	Method
CCACGTCCCCGGAGCCCTCGAGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP006003_14

>merge|NZ_CP006003|14|3422401-3422493|CRISPRCasFinder
ACAGGTCCCCGGAGCCGGACAGGTGCAGCGCCACCGACTGGGCGACCCCCGACTCCGGCATGCACACCTTCAGCTCCCCGGAGCCCTCCAGGT

>NZ_CP006003|14|12|3422401-3422493|CRISPRCasFinder
ACAGGTCCCCGGAGCCGGACAGG	TGCAGCGCCACCGACTGGGCGACCCCCGACTCCGGCATGCACACCT
TCAGCTCCCCGGAGCCCTCCAGGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP006003.1\|WP_052770942.1\|3428012_3432068_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|271320
NZ_CP006003.1\|WP_046712434.1\|3412052_3412775_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_082165105.1\|3409268_3412040_+\|DUF4157-domain-containing-protein	unknown	unknown	gnl\|CDD\|379338
NZ_CP006003.1\|WP_046712435.1\|3415004_3415832_-\|UDP-galactose-lipid-carrier-transferase	unknown	unknown	gnl\|CDD\|274737
NZ_CP006003.1\|WP_046712433.1\|3408566_3409052_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046712447.1\|3439801_3440125_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_052770939.1\|3412875_3414492_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372403
NZ_CP006003.1\|WP_046712445.1\|3436839_3439440_-\|putative-baseplate-assembly-protein	unknown	unknown	gnl\|CDD\|274051
NZ_CP006003.1\|WP_046712438.1\|3419832_3420420_+\|2OG-Fe(II)-oxygenase	unknown	unknown	gnl\|CDD\|214780
NZ_CP006003.1\|WP_046712444.1\|3432077_3434267_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046712437.1\|3418156_3419722_+\|aspartate-ammonia-lyase	unknown	unknown	gnl\|CDD\|274045
NZ_CP006003.1\|WP_046712446.1\|3439441_3439798_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377431
NZ_CP006003.1\|WP_046712442.1\|3425767_3426499_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046712443.1\|3426586_3427954_+\|peptidase-S74	unknown	unknown	gnl\|CDD\|240612
NZ_CP006003.1\|WP_046712441.1\|3424418_3425648_-\|histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_CP006003.1\|WP_046717745.1\|3434263_3436831_-\|putative-baseplate-assembly-protein	unknown	unknown	gnl\|CDD\|274051
NZ_CP006003.1\|WP_046712440.1\|3423007_3424387_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_052770940.1\|3414442_3414769_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046712439.1\|3420429_3422016_-\|oxidoreductase	unknown	unknown	gnl\|CDD\|235736
NZ_CP006003.1\|WP_046712436.1\|3415963_3418141_+\|DUF4139-domain-containing-protein	unknown	unknown	gnl\|CDD\|379285

Protein	Function_ID	Function_description	E-value
NZ_CP006003.1\|WP_052770942.1\|3428012_3432068_-\|hypothetical-protein	gnl\|CDD\|271320	cd05819, NHL, NHL repeat unit of beta-propeller proteins. The NHL(NCL-1, HT2A and LIN-41)-repeat is found in multiple tandem copies, typically as 6 instances. It is about 40 residues long and resembles the WD repeat and other beta-propeller structures. The repeats have a catalytic activity in Peptidyl-glycine alpha-amidating monooxygenase; proteolysis has shown that the Peptidyl-alpha-hydroxyglycine alpha-amidating lyase (PAL) activity is localized to the repeats. Tripartite motif-containing protein 32 interacts with the activation domain of Tat. This interaction is mediated by the NHL repeats.	1.05179e-14
NZ_CP006003.1\|WP_082165105.1\|3409268_3412040_+\|DUF4157-domain-containing-protein	gnl\|CDD\|379338	pfam13699, DUF4157, Domain of unknown function (DUF4157). This presumed domain is functionally uncharacterized. This domain family is found in bacteria, archaea and eukaryotes, and is approximately 80 amino acids in length. This domain contains an HEXXH motif that is characteristic of many families of metallopeptidases. However, no peptidase activity has been shown for this domain.	1.01236e-36
NZ_CP006003.1\|WP_046712435.1\|3415004_3415832_-\|UDP-galactose-lipid-carrier-transferase	gnl\|CDD\|274737	TIGR03709, PPK2_rel_1, polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which. [Central intermediary metabolism, Phosphorus compounds].	2.0724e-116
NZ_CP006003.1\|WP_046712446.1\|3439441_3439798_-\|hypothetical-protein	gnl\|CDD\|377431	pfam04965, GPW_gp25, Gene 25-like lysozyme. This family includes the phage protein Gene 25 from T4 which is a structural component of the outer wedge of the baseplate that has acidic lysozyme activity. The family also includes relatives from bacteria that are also presumably lysozymes.	3.71682e-17
NZ_CP006003.1\|WP_052770939.1\|3412875_3414492_-\|hypothetical-protein	gnl\|CDD\|372403	pfam12947, EGF_3, EGF domain. This family includes a variety of EGF-like domain homologs. This family includes the C-terminal domain of the malaria parasite MSP1 protein.	1.58979e-10
NZ_CP006003.1\|WP_046712445.1\|3436839_3439440_-\|putative-baseplate-assembly-protein	gnl\|CDD\|274051	TIGR02243, hypothetical_protein_SCD8A.17c, putative baseplate assembly protein. This family consists of a large, conserved hypothetical protein in phage tail-like regions of at least six bacterial genomes: Gloeobacter violaceus PCC 7421, Geobacter sulfurreducens PCA, Streptomyces coelicolor A3(2), Streptomyces avermitilis MA-4680, Mesorhizobium loti, and Myxococcus xanthus. The C-terminal region is identified by the broader model pfam04865 as related to baseplate protein J from phage P2, but that relationship is not observed directly. [Mobile and extrachromosomal element functions, Prophage functions].	4.84607e-54
NZ_CP006003.1\|WP_046712443.1\|3426586_3427954_+\|peptidase-S74	gnl\|CDD\|240612	cd12820, LbR_YadA-like, YadA-like, left-handed beta-roll. This group contains the collagen-binding domain virulence factor YadA an adhesion proteins of several Yersinia species, and related cell surface proteins, including Moraxella catarrhalis UspA-like proteins. The collagen-binding portion is found in the hydrophobic N-terminal region. YadA forms a matrix on the bacterial outer membrane, which mediates binding to collagen and epithelial cells. YadA inhibits the complement-activating pathway with the coating of the cell surface with factor H, which impedes C3b molecules. These domains form a left handed beta roll made up of a series of short repeated elements. UspA1 and UspA2 are part of a class of pathogenicity factors that act as cell surface adhesion molecules, in which N-terminal head and neck domains extend from the bacterial outer membrane. The UspA1 head domain of Moraxella catarrhalis, is formed from trimeric left-handed parallel beta-helices of 14-16 amino acid repeats. The UspA1 head domain connects to a neck region of large extended, charged loops that maybe be ligand binding, which is in turn connected to an extended coiled coil domain that tethers the head and neck region to the cell surface via a transmembrane region.	1.13826e-19
NZ_CP006003.1\|WP_046712437.1\|3418156_3419722_+\|aspartate-ammonia-lyase	gnl\|CDD\|274045	TIGR02231, Hypothetical_protein_ZK1055.6b, conserved hypothetical protein. This family consists of proteins over 500 amino acids long in Caenorhabditis elegans and several bacteria (Pseudomonas aeruginosa, Nostoc sp. PCC 7120, Leptospira interrogans, etc.). The function is unknown.	5.11806e-114
NZ_CP006003.1\|WP_046712438.1\|3419832_3420420_+\|2OG-Fe(II)-oxygenase	gnl\|CDD\|214780	smart00702, P4Hc, Prolyl 4-hydroxylase alpha subunit homologues. Mammalian enzymes catalyse hydroxylation of collagen, for example. Prokaryotic enzymes might catalyse hydroxylation of antibiotic peptides. These are 2-oxoglutarate-dependent dioxygenases, requiring 2-oxoglutarate and dioxygen as cosubstrates and ferrous iron as a cofactor.	3.05841e-18
NZ_CP006003.1\|WP_046717745.1\|3434263_3436831_-\|putative-baseplate-assembly-protein	gnl\|CDD\|274051	TIGR02243, hypothetical_protein_SCD8A.17c, putative baseplate assembly protein. This family consists of a large, conserved hypothetical protein in phage tail-like regions of at least six bacterial genomes: Gloeobacter violaceus PCC 7421, Geobacter sulfurreducens PCA, Streptomyces coelicolor A3(2), Streptomyces avermitilis MA-4680, Mesorhizobium loti, and Myxococcus xanthus. The C-terminal region is identified by the broader model pfam04865 as related to baseplate protein J from phage P2, but that relationship is not observed directly. [Mobile and extrachromosomal element functions, Prophage functions].	3.20676e-38
NZ_CP006003.1\|WP_046712436.1\|3415963_3418141_+\|DUF4139-domain-containing-protein	gnl\|CDD\|379285	pfam13598, DUF4139, Domain of unknown function (DUF4139). This family is usually found at the C-terminus of proteins.	4.88204e-31
NZ_CP006003.1\|WP_046712439.1\|3420429_3422016_-\|oxidoreductase	gnl\|CDD\|235736	PRK06196, PRK06196, oxidoreductase; Provisional.	6.97297e-12
NZ_CP006003.1\|WP_046712441.1\|3424418_3425648_-\|histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	8.54196e-47

>NZ_CP006003.1|WP_046712439.1|3420429_3422016_-|oxidoreductase
MKDAETTSPALDAAPPPEAHASLDEVRRCTRLLEAMAEDRILLAKLPEEDKRALLIAAGRIVMPDRTAKSRLEKALRREKRHDKQTKDREVRASTRIRTMRRAPIFNAPLLPAGEVPVEEGPERLLEVPRKCYVCKAEYRKLHFFYDAMCIECADFNYAKRTQRAPLSGKVALITGARVKIGFQASLMLLRSGATVIATTRFPQDSARRYMLEPDFAEWSHRLHIHGLDLRHAPSVEIFARHIEQTHSRLDILINNAAQTVRRPPGFYAHLLDGELRRFEELPEAARPLLASHRACLTELSPALAAGGTEPSAALTASWRSHDPGLGIHSAAALSLVPYALENEGDTSALFPQGRLDADEQQVDLRDMNSWRLKLADVSTSEMLEVHLVNAVAPFILCGKLKPLMTRNRTTPGHIVNVSAMEGSFSRGTKTDRHPHTNMAKAALNMMTLTSAADYAKDRIYMNAVDTGWVTDEDPAVFSQRKVEDLDFQPPLDIIDGAARIIDPVTTAENTGDYSWGNFFKDYRLTNW
>NZ_CP006003.1|WP_046712438.1|3419832_3420420_+|2OG-Fe(II)-oxygenase
MSPLLPDPDRALGEANPLVITLEDLLNEDECQELVERIEALGPSAAPVTTSQGMVMRPDLRNNSRVMFDDPALADLLHQRILTHVPRRLERTWELCGANERLRCYRYEAGEYFAPHYDGAFVRDRNERSLLTYLVYLNDGAQGGATNFLDLGRSVTPRRGMGLVFNHHLYHEGATVTGGLKYVVRTDLMYRRALA
>NZ_CP006003.1|WP_046712437.1|3418156_3419722_+|aspartate-ammonia-lyase
MTLFPLSLLVLAAAPQVSSVVVYPDRAHVTRTQDVTCRGATTAVFEHVPEAASRESFRARAPGADLEGLTAERQTLEQQLAAERREWKSRWEVLGQEELALDAASERVGTLERLSEGYTDVAVDHVTRELTGRKPDTRAWASAFDAALSVRMRAVKESWELAEKRRELKQRRDQVSAQLSRLGTEASRAEYRVEVRLSCPEGKKTRVSLTYLVGGSSWEPSYEARADEASGTVELTALATVRQQTGEDWSGAKLLLSTALPRKNATPPEMAPLLVRALKQPKERQVLTARQEARQSVEGGVEGAASSGEGPRAVSQGVSVQWEAEEAARVPGDGVAVRVVLGRHRLPAEFSWRTVPKLHPVVFRVARLANTTSFPLLPGEVSLFRGTGFLGRQRLERVASGLPFELTFGIEEALRVTRTTVEEVKRPQGLFGGKQRFRYAYRFQLTNLRERAEKVVLSEHIPVSELDDVKVEVAPESTAGLSLTKDDGIATWQVALAPAETRTLELVFHVDAPSSYVSGGL
>NZ_CP006003.1|WP_046712436.1|3415963_3418141_+|DUF4139-domain-containing-protein
MLLLGLGWAVSQLLHASTEAPITDVTVYSDRARVVRTVSLQVSGTERLELPLLPEAVDPDSIQVEAEGARVASVEVRAAQPSPFPVTEATRLLSTLDRLGDELSRVSAEHVAHQRQVAALGRIQPKEPGEDSDGANGALAPGGWSASAAFLVDLRTKREARMRELEARMQVLRNELDDRQVDAGRLGALPSPRGFEVRVALTGSGAAKVRLSYLVLQQARWYPRYELQLNPAQQRVQVAFSGLVSQETGEDWTQARLTLSTALPSTFTALPKLTTWKLGTVERFIPTARRTDELPSEPPPLPRPVTPLDVVAELRRELQTRAQGKGAPRPPQKVVQASRPAPTPTESREPAPGSSRPSPTARVAPGGDAFVLGNVIDAQSRTPVGDVVVTATSPSLPGEEVTVTDAQGIYRLPPLPPGVYTLRFEKEQFKPYARSDIQVWMQRTVRVNVELLPESLGEVVEISGGPPTIDVASTSTGVGFSLHGASTSDWRPEPVVDRYVGLAPPPGWRRPALDSQLPASLAGGHDLAFTAPRVETVPSGQGERTIPLLLESWPVQVERRVFPALASEAYLVARLKSPSRSALPGGTASLFVGDDPSGTASLPLIVPGEPFTLPLGMDPAVRTARDVRLVQSKEGFISKDDLNTYEVTLEVSNPYPFAMQTHVVDQWPLGWGGDVEATLVRTEPVASQDPKTGVLRWDVVVPASSKKTLTFEYRLKRPQNWKLTQ
>NZ_CP006003.1|WP_046712435.1|3415004_3415832_-|UDP-galactose-lipid-carrier-transferase
MQLITSASLGAKVRLEKLPTTPPKHEQKTDAKAEFEALGEELFDLQDLMWGSRLNSVLIVLQGRDTAGKDGTIKHVVGSLNPRGVSVASFAAPTLEEREHDFLWRIHRHTPRLGETAIFNRSHYEDVLAVRVHELAPPSLWKERYGHIQDFEEMLVEHGTLVLKFFLHISREEQEQRLMDREKEPRKAWKISAGDWEDRKHWADYTRAYQDVFARTSTKQAPWCIVPSDAKWYRNLVVARAVVAALRPHRERWQARLDALGAEKKAELKAWRRKR
>NZ_CP006003.1|WP_052770940.1|3414442_3414769_-|hypothetical-protein
MERDMEFSRTATMWRMLGAVLLCTVLGACGANPQEEETPEGESESPLEDAQSEESAELAVVDPYADAATPSGLNVVLNPNNAVGAPRRPARHRALHPRRLAAPGHGPG
>NZ_CP006003.1|WP_052770939.1|3412875_3414492_-|hypothetical-protein
MLSILGGSLLLDMGQGEEGRGPLRIHYGGLTLTVLFTVDFLSADRTVIATGQANLIQLGVGRFSVDIPYSNATPYRYVRLNRALAGLYLIDAVETTGPLCGDGRLSTGESCDDGNRTANDGCSTICQVEPGYTCQGSPSVCTDVNECTNGTAQCSVNATCTNTPGSYTCTCKAGYSGNGRTCNDVNECTNGTSQCSTNATCTNTPGSYTCACKAGYSGNGRTCYDINECTNGTAQCSVNATCSNTQGSYNCSCKAGYSGDGRTCNDINECTNGTSQCSVNATCSNTQGSYTCACKTGYTGNGRTCNDINECTNGTSQCSVNATCSNTQGSYNCTCKAGYSGNGRTCNDINECTAGTHTCTPGQRCVNQPGGFDCIPGSCPPPQVKCGSACVNANTDPANCGCCGNTCGAGKTCTNGVCGARAPQGSPLGVTASWEREQDQDLIVRTPNGELLAYGPAKAGALAPSGPEGTPPSGTYFICLKSTSFEASPTDDTPVPYSLTVKRQGQADHVLRGVFLGADADSLCGADHPALIEAIIYP
>NZ_CP006003.1|WP_046712434.1|3412052_3412775_+|hypothetical-protein
MAEVKWTASSQHHDWNDRRAPAAFIDALAEAGLVGAVEGVCGWDEDATRRTVKLQGPGVGARVMAEIPKKEKHPFLKAWGSTPSPWTLTVGISRFVADEGRVAGLNTFVFQFDGAAYEDEAGSALLLAAFHAAHSPDTTEFAAIHPLARYEALQTGEYDSAVTLRPMFAGVFWASFLGKGHVEQFDRAVLARLPPERVEWVDGGKGLFVVTTPRLGDATTPAVEAQMLRLTEVFREARRR
>NZ_CP006003.1|WP_082165105.1|3409268_3412040_+|DUF4157-domain-containing-protein
MRRSAARVHASHSSETRGSAPASRPLASVATQAVAARAVGEPGVVAPGVRFDFSRLPLTPSVQRVACAGGACGCSSCEKKKEEVARAAQPGVPGVGPSEHVSAHVARGLGAGQPLESSARAFFEPRFGHDLGGVRIHTDARAADSARALQARAYTVGSDIAFQEGAYSPSTHAGRRLLAHELTHVLQQTGGRATSGARLARFATGGLSVTSPGDASEREAESMADAVMADGATHEPGRHRLGVARDFSPAPASKYTVPSPPAPPTPPPLTTTSDVPPTQSGTPINKNGLVAAEEGVNLRASPDTGSAPLERLPQNTRMFVSREQSGGWYFVMLVDGRFGYVAKSHVTVDMPDPEAKLYRIASGETALDIVKRFYKSDATKWGQDERFFVNVLVFVNAERGRKGIFKPDPEGDWDTTQTHAGSQIWIPGVEFAKALKGQVSSGSITYEAYQKVKNVITAIGEFLAGSIAFVAGLLHGVLESLWDTLVGLVDLAKLAGKLVWSLVTGNLLSDIRGFFSDLSKLDFKQLVSAGLDALDKKWNDPSILKRWHFRGWITGYALAEIVMLFFSGGALTALKGAGKAGKFAQFLAKMPRAAKFLEKAAEAAKGLKEAESLRKGMKALTTARDWAVRVLKVPGHILQNLSAEALERLKRLPQWAIERFSELSDVAKARVLGCASPCKVDLGAIQKYLAELAAKGATGAKKLTTPESVLVALPKDLNIGKIKKYLDEYPALMELIRKADLTDLDLAKLADFMTDADKLNPKSAYQTFTRYLTLVVPSKTGGDIGAFNKIVEAVVKADPRQGAALKGPMFEAFARTHLQEFAGKAFTRETFTVPGGKRRTADRFFADKGELWEVKHQLTDKVPPGQVDDYLSFLGTKGNSTGAEVKSLNYLFPTEDAAKLNSALKARGITVWYVKQPNVLTKL
>NZ_CP006003.1|WP_046712433.1|3408566_3409052_-|hypothetical-protein
MKRILTFVLAVFVLGCSGSESPELEELGQQSSELAAGYVTASPSTVRINLDRTNTGTTNVCWSTTGVSTAEVWLSLNGQSEVLFTRAPSGCADATWITAGNVFEFRLYAEMTHTTLLGFATVVGEGYRGGTQPPGCPSSCIPNYHCCVGERFCKPNTQACN
>NZ_CP006003.1|WP_046712440.1|3423007_3424387_-|hypothetical-protein
MDGPPSPTPRDSVDPWRLPLCCLAAAVVLALTLQLSNGTLFDSALRGLTLALGLSLLAVVGPGVSRPWTWGEAALALGLGIGLLLQLQVLLTDYPSSALRLQGPWPFALFHERLVAAALISGALLAGPDWLRKVGVPALLGVYLLLGLWILRHAPSPHIDVLVFQVQGADELLRGQNPYAMTFPNIYGHGHWYGEGLVRDGRLLFGFPYPPLSLMFATLGRALATDPRHAQLVATALAAGLMAWTRGGRLGAGAAALYLLTPRGFFVLEQSWTEPFLVLLLSATVFCAVRFPRALPYVFGLTLAIKQHTVFLLPLALLLLPEPRKQLWGLLWRAGATALAVSLPFALPDPKAFFHSVVALHIHQPFRVDSLSYLAAWVARGHPTPPLWIPFAAVAAALGLSLWRAPRTPAGFAAATALTYATFFAFNKQAFCNYYYFVVATLCLAVAAARLPSAPTPAR
>NZ_CP006003.1|WP_046712441.1|3424418_3425648_-|histidine-kinase
MLVAQDTTRSAPSQSSPASGITPDVQAIARIDAVKTVLRVLLQTTGLRLAVVARVTALEWRCCAVLDEMGFGLKPGDTLAITTTFCNTVRTSATPLLVNHASQEPCFSSHPAPRLYGVESYIAVPLYRRDGTFFGVMCALDSNPAALPQDKLEIFRHLGDLIGHQLENQDELERSEAQLFSEKEAAVLREQLLGIVSHDLRNPLNAILMSAATLVRRTDLDERARRAVRRIVDSADRAQRLIRDLLDFTQARMGQVLPVDRQPLDLHELTQQVAEEVQAVAPERVLEVRTQGIGRGAWDADRIAQVLHNLLANAMQYSPPGARIQVSSEAHDQELVLRVHNDGPPIPLEVLPTLFEPMKRGTTNGAERRSVGLGLFIVDQIARAHGGSVEVASTQAEGTTFSVHLPRRG
>NZ_CP006003.1|WP_046712442.1|3425767_3426499_+|hypothetical-protein
MRSALFVLLLLTMGACRRKEAPRIEQVGPAELTHQRSCEWLDWENNSCRADSVLRAGEVRFEQVTFVEANPSATRALVGQLDGSGSLVDLRSGDVLLRFPPHTSKREWCDDSRLVVSSPLADFGSSQGLLGTSLEVVWFDPSAAVQRAVLHRGLRAVPRLACGPGGSLAFIVSGTRGEAPIELYRWSPEEGSKLLETWAGEVENGDSSDLDISWNSSGQPEWCAWVRPYSVNRCVPPVRPVAR
>NZ_CP006003.1|WP_046712443.1|3426586_3427954_+|peptidase-S74
MKTRMLCATLGALALGAVGCGDDAPPAKSWEVGSGLRLDDGDVVSVVYGSGPGTVAEGNDSRLTDARAPLPGSTSYIQNGTEPQQASLSLTGSATTTAGHFVDAAAAVAQPVPLLRVTNTSTTPAWTALPLLSVDSAGGLVARGELEQGALPTSGPGLRLMWAPSKGAFRAGFAQTTQWDEDNVGVYSWAGGANSRASAYGSFSFGDACVASGVVSTCFGSSNQATGSASFASGAASTASGFTSVAMGYTNNATGQGSVALGYRVDANADYSTAMGQRASSGGFKGSFIWADQSTTSVISNTAEHQFLVRASGGIQLRTNATATTGCNLPAGSGVFTCTSDRNQKEDFRTVDGEQLLEKVARLPVESWRYKEEALGVRHVGPVAQDFRAAFGLGTDDTSIGMLDIDGVNMVAIQALERRTRQLRERDAEVDALKAELAELRRGLAELKAAMPRAR
>NZ_CP006003.1|WP_052770942.1|3428012_3432068_-|hypothetical-protein
MKGDFSRNTFRPAKHYSTVRMQQGRVQLDADWNEHVDIQQYLDQTTRRDVIGHSGTPQQPGTPAEQTGFALFTQGTRPFVRAGRYYVEGVLCENEQAVALDEQPDLPGFTLPVANGRYLAFLDVWQRHVTALEDPELREVALGGPDSATRTRTVWQVRLLRLTGTNASGPIEGVPCHTFGTPEWLPDELTSTGTLAARGEPEQASDNPCIVAAEAGYRRLENQLYRVEVHRGNTGGGTATFKWSRDNGILFTKVESVDVLNRRMVVTEPGKDGYRRFQPNQWLELTTEERVLRGEPGELIRVESMTGNRITIDAATWPAVMPSGVLTVRGWDNVGPAGALDIVPAPADPSLGWTSLESGVQVRFTAGRYRTGDYWLIPARTVTRNVLWPQDGGLPASEPAHGIRHHYCALAVLERNSDGWHVHDCRNLFPPLTEHKTLVYAGGDGQEVLPARPPAPPSRLARPLRAGVFNGRIPVVGARVQFSVVLSEGQGTVADVNLPDDPQTTIVVYTDASGIAEVFWTPAIDGWQTENDPRHSQVVEARLLDHGNEAIHAPLRYFASLSVSSKVAYNPDDAQEILNDTHTVQQALDTLSRQLVLTYEGGDGQEVLPGERLPHPLRVGVARHQRRAANQSVRFRVLSGAGGQYTGVRLAGSGNPWTESIVVTTGDDGLALVEWLPNPNDVTQQVEARLLVSEGGPLVEAHLPLVFTARLSLANRVAYQSGGCQTLLNADTVQEALDTLCRQRTFLYLGGDGQEGAPLQELPTPLMVAVMQGENPVANALVHFRIIQVADGARLRPAEGTGTPGASLLVRTNAQGIAAALWTLSNAPTQRVSAQLVEDAQTPTRVPPILFNARSTVSVAAEPSVKVTRVEMASNSDLPIENDSIVEFDPFVALSQGIRIICSEELAPLMSPAGAPLPLPRPVVSLSVEINYPLTTHDSTWWREQMGRLVGIVGHQTFELRGEARIFGTDIVWVPALESYRWLNQLRVYDTEDRTNPRMLAKLRIRGGYIHSRDGSRVMDGEVISRSLSQRFAAGLPNRGDGRQGGDFELWFWIRCFTNSPPGIAPGTLGTRTLTASSTVTSALEQPWGLARDAKRQELLVADTGANAVARLSLENHAAVGKLEKDLEQPTALVLDARRDELYVANAGSDSVAVFRRDDQGGFQPARVLAGKKTGLSGPLGLALDAEHQRLFVAGSGKGQATGLTAGPKGGRGAYLALFDAQAQGDTAPRARWTGEQLKLNRAAGLAWDAVHEELYVADYGADAVSVYSLASLLDTKAAAVKPLRVLQGKATGLSQPTGLSLDASGEELWVANARTNSITVYARDAAGNTAPLRTVEAPSESGKSLRAVLP
>NZ_CP006003.1|WP_046712444.1|3432077_3434267_-|hypothetical-protein
MTPSPRDRLYKLLPAIHRAKDTLQGEPLRALLAIMEHELLALEEDIGQLHDNWFIETCQEWVVPYIGDLLKVRDLVPVDPGLFSQRAYVANTLAYRRRKGTAAMLEQLARDVTGWPARAVEFFQRVGTTQYLNHPRLTSLRTPDLRDANALELVGTPFEDATRTVDVRHIDNQRGQHNLPNVGLFLWRLESYPVVLAPAYRVLPASEPGATVEGLFRFDALGCDTHLFNLPQSETTLSSLAGELNVPTPLRRRPLYDELEARRAALARGQTPEQRYFGATPPFTLHLDAGPGTFEAISPDEVLICDLSTWHRPPATLPYPPLDPSLPPVNRSIRVAVDPVNGRLAFAEGLPVPATLSVSYAYGFSSEVGGGFYDRQETLLPLEQRGAWRVDTRVGPYTTLASALSASGASGDALVEVLDSERYPLATLDVAAGSRLELRAANLQRPVIDLQGGRGLVRLGAGATLVLSGLLVRGGVLEVQAADNATLDLRHCTLVPGQDLLPDGQPRTTGPSLVVKGEKDGDCTVLLHRCITGPVRTGRATVLRLEDCIVDGLGGPALQGLPIPPGPLLPSEEDLEAEGLTGTLHVLASTVLGTVETTVLELASDSLFTGRVNVVQRQKGCMRFCYVPPGSHVPQRFRCQPAYAEDTPEDVRLEIERRVKPVFTSDRYLEPGYCQLRDDTDSGIRRGASDEGEMGVFHHLQQPQREANLRASLTDYLRFGLEAGFFFVT
>NZ_CP006003.1|WP_046717745.1|3434263_3436831_-|putative-baseplate-assembly-protein
MKDSGDCDACESQAATEAAPLYNRPGQPALAYRIGTHSRFFQRMLARLPREFLPDGEFAGTRPLAALSTRGTEDLSIAMLDAWATAADVLTFYQERIANEGFLRTATERRSVLELARQLGYELKPGVAASTYLVFTVETAPGAPSRVQVPVGVQVLSIPGQDARPQTFETTEALEARAEWNLLRVPRTQPQPLMRGEDTLYLRGLQPGIQPGDALLLVGEERESQPGSEQWDLRWVKTVKQVSNPKEPELNHTVVTWEPGLGSESPRMDPADHPRAFVLRLRGNLFGYNAPSFKAMPDEVKQRYNPDYRPGDARFTQWPQFENTTAVQGIVDLDREYPTLVHGSWVALWKSRYLELYRITDIQPWAREDFTMTAKVTRLTFDTNEHLSYFPLRSTVVLAQSEELPIGEMPRTDAVQGDSIELDRAVAGLEPKHVLLIEGRTLVDGQSGEWLRQVVALDRAEALPDGRTRLVLQEPLAAPLARDTVLIHGNVAPSTHGETVREVLGGGDGSRTHQRFVLRKPPLTYVAAPTDTGGESTLEIRVNGVLWKEVPTLFGQDERAEVYMVRLQDDGAVVVTFGDGVSGARLPTGQENITAVYRSGIGPEGEVDSGQLALLKVRPLGIREVNNPLPATGAAAPESRDEARDNAPASVLTLRRVVSLQDYEDFASTFAGIGKAQAADLTNGERILVHVTVAAHNGEPVEPGTQLHESLEEALRAHHDPVRQFALSSYERIHFAVEARLRLDARYLPEDVLARAEAALREAFSFERRQFAQAVSGAEVIRVLQDVPGVVMVDLERLHPTTPFIPEQKLFSVIRARGARWERTLLRPAQLLLLDPSLQGERRGVTLVHDLEVSP
>NZ_CP006003.1|WP_046712445.1|3436839_3439440_-|putative-baseplate-assembly-protein
MGARYVCQSEQRRRLVEAHPTFNGIDYLEVLDEEAATLELERQRTLWVRCYKPLPVNISADNVGITGGVRLKDIGVALAFRMDQPPPEPRTTQAERDEYARRVALDVENGTTETQQTLVVRTTSSGDFSTYTLALLRGFLDTVPLEGFDALLSRVDFTFKVECPSEFDCAPPKSAVTPDGVDPTIDYLTRDYASFRRLLLDRLSEVAPQWKERNPADLGVTLVELMAYSADYLSYYQDAVATEAYLGTARKRTSVRRHARLLDYPMHDGGNARAWVTVSLTPDAEGTPLAGPTEVTPGTVFITTVDAPRVVDARQLQAAIVSGAEVFESLHPTTLYSGHGRITFHTWGEDRCCLPKGATAATLLNPPSPADPTKKTFTPENFSEGKVLILEEARGSSTGRAVDADPSRRHAVRLTEVAFGEDPLLGVDVVEVSWHTEDALPFELCLWTVTVPHDSTGEKEDVPGQPAPVSVARGNVVLVDHGRTLTEELPAVPETGGYRPRLSRGPLTQVSRVEGGRAVDPTASATSALRSAPEEALPALWLREAESGRVWVPRRTLLNSGRFSRELVAEVEDDGRARLRFGDNVLGERPGAGVGMTATYRIGNGGAGNVGAESISHVYSPVGGAWRDAILRVRNPLPARGGVEPEAVERVRIDAPQAFRIQQRAVTEEDYAEVAQRHPEVQRAVGSLRWTGSWHTMFITVDRRGGFPVDVDFSERLTTFLERFRLAGYDLRVDAPLFVPLDIAMTVCVLPGYLAANVKAALLEVFGNGELPDGRRAFFHPDNFTFGEPVYLSQLVATAMKVPGVAWVETEDAPGKPQRFRRFGQVPRDEWKNGLIAMDRLEIARLDNDPSQPENGKLDFYMQGGL
>NZ_CP006003.1|WP_046712446.1|3439441_3439798_-|hypothetical-protein
MHIAFPYRLDGRGRTADADLDTHVRHLIEQVLFTAPGERVNRPTFGTGLGQLVFAPNSSELATATQFLVQGALQQWLGDLIQVEAVETHSEEASLQVTVRYVVRRTQQRQTAQFSREL
>NZ_CP006003.1|WP_046712447.1|3439801_3440125_-|hypothetical-protein
MGAFVVHVGATVMCPHGGQVQTMPGNPRVKVGGQFVATMADQYLVTGCTFPPQSGGPCVQVKWMVPSVRVRVGGQFVILQNSVGMSMGAAPLGPPQVVMTQVRVRGT

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Crispr_ID: NZ_CP006003_16

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP006003_16

3877937-3878047

Orphan

Consensus_repeat	Method
CCCGGGCGATGCGACGGCCCCGAGTGCGCCCACGATGGCCGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP006003_16

>merge|NZ_CP006003|16|3877937-3878047|CRISPRCasFinder
CCCGGGCGATGCGACGGCCCCGAGTGCGCCCACGATGGCCGCTGGCGCCGCGGCGCCTTCCGGACGAGCCCCGGGCGATACGACGGCCCCGAGTGCGCCCACGATGGCCGC

>NZ_CP006003|16|14|3877937-3878047|CRISPRCasFinder
CCCGGGCGATGCGACGGCCCCGAGTGCGCCCACGATGGCCGC	TGGCGCCGCGGCGCCTTCCGGACGAGC
CCCGGGCGATACGACGGCCCCGAGTGCGCCCACGATGGCCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP006003.1\|WP_046712706.1\|3874718_3875207_+\|flagellar-assembly-protein-FliH	unknown	unknown	gnl\|CDD\|374803
NZ_CP006003.1\|WP_046712700.1\|3867557_3867950_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046712703.1\|3869330_3870146_+\|type-III-secretion-protein	unknown	unknown	gnl\|CDD\|274190
NZ_CP006003.1\|WP_046712715.1\|3882081_3882552_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046712718.1\|3884475_3884694_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046712704.1\|3872618_3873293_+\|flagellar-assembly-protein-FliH	unknown	unknown	gnl\|CDD\|235850
NZ_CP006003.1\|WP_046712699.1\|3867103_3867538_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP006003.1\|WP_046712712.1\|3879774_3880593_+\|type-III-secretion-protein	unknown	unknown	gnl\|CDD\|376520
NZ_CP006003.1\|WP_046712702.1\|3868816_3869227_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046712717.1\|3883726_3884320_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236766
NZ_CP006003.1\|WP_046712708.1\|3876136_3877561_+\|YscQ/HrcQ-family-type-III-secretion-apparatus-protein	unknown	unknown	gnl\|CDD\|274196
NZ_CP006003.1\|WP_082165130.1\|3878529_3879501_+\|EscR/YscR/HrcR-family-type-III-secretion-system-export-apparatus-protein	unknown	unknown	gnl\|CDD\|236593
NZ_CP006003.1\|WP_046712707.1\|3875240_3876140_+\|flagellar-hook-length-control-protein-FliK	unknown	unknown	gnl\|CDD\|350657
NZ_CP006003.1\|WP_046712714.1\|3881746_3882028_+\|flagellar-biosynthesis-protein-FlhB	unknown	unknown	gnl\|CDD\|376521
NZ_CP006003.1\|WP_046712716.1\|3883139_3883604_+\|CesD/SycD/LcrH-family-type-III-secretion-system-chaperone	unknown	unknown	gnl\|CDD\|274197
NZ_CP006003.1\|WP_046712705.1\|3873318_3874632_+\|EscN/YscN/HrcN-family-type-III-secretion-system-ATPase	unknown	unknown	gnl\|CDD\|274191
NZ_CP006003.1\|WP_046712711.1\|3879514_3879778_+\|EscS/YscS/HrcS-family-type-III-secretion-system-export-apparatus-protein	unknown	unknown	gnl\|CDD\|376522
NZ_CP006003.1\|WP_046712701.1\|3867957_3868794_+\|RNA-polymerase-sigma-70	unknown	unknown	gnl\|CDD\|224112
NZ_CP006003.1\|WP_046712713.1\|3880617_3881700_+\|EscU/YscU/HrcU-family-type-III-secretion-system-export-apparatus-switch-protein	unknown	unknown	gnl\|CDD\|376521
NZ_CP006003.1\|WP_046712719.1\|3884871_3885327_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP006003.1\|WP_046712706.1\|3874718_3875207_+\|flagellar-assembly-protein-FliH	gnl\|CDD\|374803	pfam16789, YscO-like, YscO-like protein. This family of proteins is similar to the type III secretion protein YscO. The family includes Chlamydia trachomatis CT670 which is found in a type III secretion gene cluster. CT670 interacts with CT671, a putative YscP homolog and CT670 and CT671 may form a chaperone-effector pair.	4.03923e-26
NZ_CP006003.1\|WP_046712703.1\|3869330_3870146_+\|type-III-secretion-protein	gnl\|CDD\|274190	TIGR02544, YOP_proteins_translocation_lipoprotein, type III secretion apparatus lipoprotein, YscJ/HrcJ family. All members of this protein family are predicted lipoproteins with a conserved Cys near the N-terminus for cleavage and modification, and are part of known or predicted type III secretion systems. Members are found in both plant and animal pathogens, including the obligately intracellular chlamydial species and (non-pathogenic) root nodule bacteria. The most closely related proteins outside this family are examples of the flagellar M-ring protein FliF. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	8.99909e-43
NZ_CP006003.1\|WP_046712704.1\|3872618_3873293_+\|flagellar-assembly-protein-FliH	gnl\|CDD\|235850	PRK06669, fliH, flagellar assembly protein H; Validated.	1.39801e-23
NZ_CP006003.1\|WP_046712699.1\|3867103_3867538_+\|hypothetical-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	1.1443e-10
NZ_CP006003.1\|WP_046712712.1\|3879774_3880593_+\|type-III-secretion-protein	gnl\|CDD\|376520	pfam01311, Bac_export_1, Bacterial export proteins, family 1. This family includes the following members; FliR, MopE, SsaT, YopT, Hrp, HrcT and SpaR All of these members export proteins, that do not possess signal peptides, through the membrane. Although the proteins that these exporters move may be different, the exporters are thought to function in similar ways.	8.4026e-48
NZ_CP006003.1\|WP_046712717.1\|3883726_3884320_+\|hypothetical-protein	gnl\|CDD\|236766	PRK10811, rne, ribonuclease E; Reviewed.	0.00331144
NZ_CP006003.1\|WP_046712708.1\|3876136_3877561_+\|YscQ/HrcQ-family-type-III-secretion-apparatus-protein	gnl\|CDD\|274196	TIGR02551, translocation_protein_Q, type III secretion system apparatus protein YscQ/HrcQ. Genes in this family are found in type III secretion operons. The gene (YscQ) in Yersinia is essential for YOPs secretion, while SpaO in Shigella is involved in the Surface Presentation of Antigens apparatus found on the virulence plasmid, and HrcQ is involved in the Harpin secretory system in organisms like Pseudomonas syringae. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	1.60382e-33
NZ_CP006003.1\|WP_082165130.1\|3878529_3879501_+\|EscR/YscR/HrcR-family-type-III-secretion-system-export-apparatus-protein	gnl\|CDD\|236593	PRK09617, PRK09617, type III secretion system protein; Reviewed.	1.48522e-100
NZ_CP006003.1\|WP_046712707.1\|3875240_3876140_+\|flagellar-hook-length-control-protein-FliK	gnl\|CDD\|350657	cd17470, T3SS_Flik_C, C-terminal domain of flagellar hook-length control protein FliK and similar domains. The flagellar hook-length control protein FliK is a soluble cytoplasmic protein that is secreted during flagellar formation. It controls hook elongation by two successive events: by determining hook length and by stopping the supply of hook protein. It contains an N-terminal domain that determines hook length and a C-terminal domain that is responsible for switching secretion from the hook protein to that of the filament protein, by interacting with FlhB, the switchable secretion gate.	2.43555e-07
NZ_CP006003.1\|WP_046712714.1\|3881746_3882028_+\|flagellar-biosynthesis-protein-FlhB	gnl\|CDD\|376521	pfam01312, Bac_export_2, FlhB HrpN YscU SpaS Family. This family includes the following members: FlhB, HrpN, YscU, SpaS, HrcU SsaU and YopU. All of these proteins export peptides using the type III secretion system. The peptides exported are quite diverse.	6.8428e-35
NZ_CP006003.1\|WP_046712716.1\|3883139_3883604_+\|CesD/SycD/LcrH-family-type-III-secretion-system-chaperone	gnl\|CDD\|274197	TIGR02552, Low_calcium_response_locus_protein_H, type III secretion low calcium response chaperone LcrH/SycD. Genes in this family are found in type III secretion operons. LcrH, from Yersinia is believed to have a regulatory function in the low-calcium response of the secretion system. The same protein is also known as SycD (SYC = Specific Yop Chaperone) for its chaperone role. In Pseudomonas, where the homolog is known as PcrH, the chaperone role has been demonstrated and the regulatory role appears to be absent. ScyD/LcrH contains three central tetratricopeptide-like repeats that are predicted to fold into an all-alpha-helical array.	4.08378e-34
NZ_CP006003.1\|WP_046712705.1\|3873318_3874632_+\|EscN/YscN/HrcN-family-type-III-secretion-system-ATPase	gnl\|CDD\|274191	TIGR02546, III_secr_ATP, type III secretion apparatus H+-transporting two-sector ATPase. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	0
NZ_CP006003.1\|WP_046712711.1\|3879514_3879778_+\|EscS/YscS/HrcS-family-type-III-secretion-system-export-apparatus-protein	gnl\|CDD\|376522	pfam01313, Bac_export_3, Bacterial export proteins, family 3. This family includes the following members; FliQ, MopD, HrcS, Hrp, YopS and SpaQ All of these members export proteins, that do not possess signal peptides, through the membrane. Although the proteins that these exporters move may be different, the exporters are thought to function in similar ways.	1.04516e-22
NZ_CP006003.1\|WP_046712701.1\|3867957_3868794_+\|RNA-polymerase-sigma-70	gnl\|CDD\|224112	COG1191, FliA, DNA-directed RNA polymerase specialized sigma subunit [Transcription].	1.9218e-32
NZ_CP006003.1\|WP_046712713.1\|3880617_3881700_+\|EscU/YscU/HrcU-family-type-III-secretion-system-export-apparatus-switch-protein	gnl\|CDD\|376521	pfam01312, Bac_export_2, FlhB HrpN YscU SpaS Family. This family includes the following members: FlhB, HrpN, YscU, SpaS, HrcU SsaU and YopU. All of these proteins export peptides using the type III secretion system. The peptides exported are quite diverse.	3.86897e-151

>NZ_CP006003.1|WP_046712708.1|3876136_3877561_+|YscQ/HrcQ-family-type-III-secretion-apparatus-protein
MSVEPEDESPGVHERTMLVDLRNLKPVKPPPEKAGAPEKVEPRPEKVERPERVERSAWRPFAFKGLEKVSRAQGQLAERLRWLTPNAGTLTGVSARLKGLFDAEVGLSLESVQVRPMAELRRFLGDPTFLAVLAPGALPGRAVLEVELALAHTAVDLLLGGAGETVGLRPLTDIEEGVMGYVILEALRVLVPALQAGVPRPRLDGVARGVDEVSARLGDDGPMLTVHLNATLGPHGGMVRFVVPAAVLEAAEPAVESAQRRARVKADLAANAGRLSAVRGWLRAEIGTAELTTQDLASLRVKDVVLVDVLSARPDRGEPGTAQLRLGAGRSGHAEAEVFVEDGRYQARITRIIPGESGNPRSATEEGGGRDEEEDFTNPELDVPPELEGAPLDDVNKPDGSDLLGDVPLQIAVELARIPVTAEQVVGMRAGQVIELSRGPGEPVELSINGKVVARGELVEMEGQLGVRVTTLAS
>NZ_CP006003.1|WP_046712707.1|3875240_3876140_+|flagellar-hook-length-control-protein-FliK
MSRVDDDREAARLAERIMQEKKLAEGQAKKRQEGTSAFQKLMQPQAQPQATAPTQTPQTPGGLARQVLAKATQQGKTFGEHLQQPPQMGGNPASTLAQAQRRGDTNTSEARSGSRASDAKETQRTSEGREKDLDKADSALGQVSSERGAAIRADADAGGKGSGGGGGKEDKKGGGGTEMGAGFRFNPALMAPVPVAKPKDTAGSERLRAMASEIAQKIVDRVRVGTNAAGLAEFQIDLRGDVLNGLSIKVSARNGKISATFSGTNRDVLKMLEEQSDGLRTALGGRGLKLETVRFEAKT
>NZ_CP006003.1|WP_046712706.1|3874718_3875207_+|flagellar-assembly-protein-FliH
MPPYRLQTLLDMRTRAKEEAEQAFSDAIKALEREKVELQRLMDELERRKRERKEKVAAYLKEIMAKGAGINGMNMMGRFEERLKDEEAQVALEVERQREAVKVAERLVEQRRREMAEAAKELKAIEKHKETWQKQVKHERQQREELSQEEIGNALFLARQRK
>NZ_CP006003.1|WP_046712705.1|3873318_3874632_+|EscN/YscN/HrcN-family-type-III-secretion-system-ATPase
MAIDLSRYLDLIKDAQTVRVRGRVTELTGLIIKASVPNVRVGELVLIKSRARGAVKAEVVGFQGDEVMLMPLGELYGIGPDSEVVPTGRPLSIKCGEALLGRVLNGIGEPMDGSPLPEEGLIDWSVDRDCPDPFTRQRIERPLPLGVRCIDGLLTVGEGQRVGLFAGSGVGKSTLMGQIARNTQADLCVVALIGERGREVREFIEDAMGEEGMKRSVLVCATSDQPSLVRLRAAYVATAIAEYFRERGGNVLFMLDTVTRLARAQREIGLAVGEPPARQGYPPSVFSMLPRILERTGNSQKGKCTAIYTCLVAGGDMEEPIADEVRGILDGHFILNRALGERNQWPAMDVLASLSRVMSGIVSKEHKKAAGKLRETLATYEKQRDLILLGAYQYGTDPRTDYAIDKYDAIIDFLKQDTHSNSGFEETVEQLVALFEE
>NZ_CP006003.1|WP_046712704.1|3872618_3873293_+|flagellar-assembly-protein-FliH
MAIGKVIKGDGTAEPSVVSERPVLRPPRAGVMNAEVFEARQGAQGILEEAQREKERILAEAQREREALLVKTREEGRQEGLAQATEIILRAKMQAGEILATYEQDVIALGLRVGEKIIGRSLEKDPDLMLELCASAIDNLRSARSMVLRVHPKTAAVLRAKKPVLMELIGRAVDLAIKEDPEVAPVGCIVQTEFGTVDAQLPTQLEMLQSVLLPDQNGPKEGPA
>NZ_CP006003.1|WP_046712703.1|3869330_3870146_+|type-III-secretion-protein
MIRRPQAFVAPLLALVLVTGCHIELQHDLSEADANEIYVLLSKNGINAKKEKEEGGNEVRFMITVPKTDAAEAAELLKLNSLPRPVEKGLSHFAKGSMVPTATEERAMLLKAMGGEVSNALNQIDGVLEARAIVSVPENNDLTQPENKPMPSASVFIKFRPGAEGKPPIDVSAVKSFVATAVPEMKPDAVTVLMTPALGPKAEKTDENRQQDVLGLRMTASSASQFKVMIAGAFALILGMMGVTAWSIMRGGGGNAPTARGPRPRVRPPEA
>NZ_CP006003.1|WP_046712702.1|3868816_3869227_+|hypothetical-protein
MDAAQGVNKAQATQKTDMVRQVETVNKTEKAGLNKVNANAAQPVSAKAAEPVAAKTETGKTAKATDMMEQVLGDLEKGQGNLEKIISQAASGKQFSNAELLSLQASMYQYTQQLDLTSKVVEKATTGLKDVVKTQV
>NZ_CP006003.1|WP_046712701.1|3867957_3868794_+|RNA-polymerase-sigma-70
MPLGDDRQAILTKYGPYVRSLAATVRKQFNAQLELDELVAYGQIGLLEAAERFDPKVGANFLTFAHYRIKGAIFDGLRKMGILRGSDARAAYVGERAAAYLGNLSDRESGSSNRGSSFDDDVSDISDAVQGLAMVFASSLEGADSAGYTDESLPVDIRLEQEQLKTRVRAAIEKLPEKERKLLQGYYFQGRTLEEAGAEIGQSKSWASRLHARAIDRLKELLNEEEELPPTSTDARRLSHGGSDGGHLRGTGGAAKAAGSGRSADDEAGRVEVRRSSR
>NZ_CP006003.1|WP_046712700.1|3867557_3867950_+|hypothetical-protein
MAVGGVGRGGGKGRAGGAKGPSSAAPTGGAFGARVDKAESLVGVSGLVGSSNVQGPQAADPVAAQAMAIARGLKNGGFKSKEEATRALVAEVLKEKLRMKSSSLTTKIADALQDDPRLNQVLERLWSKAE
>NZ_CP006003.1|WP_046712699.1|3867103_3867538_+|hypothetical-protein
MAESVSEISNSLVPLGRQQAMVLLEAGYLWLDMGQFDKAKEIFAGAAALMPKSEVPQLGLGAVEFAQGRHDKALQAYRSAQRLAPQASLPRAHVGEALLFLGKVPEALKELKAAIDLEPEGDGARLAQALLQAKDAGVLPPAKK
>NZ_CP006003.1|WP_082165130.1|3878529_3879501_+|EscR/YscR/HrcR-family-type-III-secretion-system-export-apparatus-protein
MPKPWSASGHSARRRTWFPSALSSRSSFPVAPEARRPSPLAPDGPLPVNALTPALPRLPRVAPWLFAAVVSLHPFIALAQKKGRPGGIPDSVANEAVSADSFTSRPLVLILALAAMGLVPFALMMVTSFVKISVVLSIVRSALGTQQIPPTQVITGLAVILTVYIMAPVGTSMYRASEVDIWDTGGAGNFSSAKVGTLLEGADRAKEPLRAWLMKKVTVKDRSLFYNLAKKMRTGEDRDSVKSEDFMVIIPAFVVSELKEAFQIGFLLFVPFIVIDMVVANILLALGMHMLSPTTISMPFKLLLFVLVDGWYLIAKGLVVGYL
>NZ_CP006003.1|WP_046712711.1|3879514_3879778_+|EscS/YscS/HrcS-family-type-III-secretion-system-export-apparatus-protein
MNQLTFITQEALFLVLVVSAPPVLMSLLVGFMISLFQATTQIQEQTLTFAPKVIIVFGVLAMTGPWIGSQLVRFTFHVFDRFPALIK
>NZ_CP006003.1|WP_046712712.1|3879774_3880593_+|type-III-secretion-protein
MNAAELVSELAARTNFSAAIFTVALLMCRVMPVLIFSPFLGGEVVPTEMKMGIGLTLAIVLYPSIAHSVTTIPLSALPYIALMAKEIFIGFSMAFVVNGVFEAARIAGTLADTMSGSNNAQLYVPQLGQQVSLFSNLKVQLSVVLFLTLDGHHLVIRALADSLTTVPLDGFPRFSQGSWTFFDVLIRVFADMLRVSLALAAPATLAAFLTDVALGAINRVAPQIQVFFISMAIKPLVGVLITFLVLGTLIGRIQDELAHMLKVLHDALRLLA
>NZ_CP006003.1|WP_046712713.1|3880617_3881700_+|EscU/YscU/HrcU-family-type-III-secretion-system-export-apparatus-switch-protein
MSDESGDKTEEPSQKKLDDSRKKGQVWKSKDLSGVAVLVVGLAALKASWDNVEKEISSLFLFSFDHMARGGDLSDATGQLLYLGVRALLLVTMPVLLGGAVIGGLMEFLQVGSLFTMDPLMPKLDKLNPLGGLKNMFSKKSLVELLKNLIKISVTAYVVYGVVRDAMPMVLETVRQDTHTIMVIMGELVTRVAARVALLFVIFAIFDVWWQRKSFMKDMMMSKDEVKKEYKESEGDPHHKAKRKEFHQEIMEGQQMEAVRDADVIVTNPDHVAVALKYDREKDGAPRVLAKGVDHKAERIKGIAREQEVPTLRNVPLAHALLRVEVGHEVPEELYDAVAEVLNFVYELKNGAPQAPAARA
>NZ_CP006003.1|WP_046712714.1|3881746_3882028_+|flagellar-biosynthesis-protein-FlhB
MSDDAEIAIALKYDKENDGAPRVVAKGLRLKAEKIRAIAKEHGIPVMRNVPLANALYRVDVGQEVPEELYDAVAEVLNFIYELQREQAASGGR
>NZ_CP006003.1|WP_046712715.1|3882081_3882552_+|hypothetical-protein
MARINNQPPGGPQWPWGGPRSVRERLVDPSQVDRKKLRKTGNPKNPALASAALLDFIGPAHSSEELRLPLPPHPGGHEADLEGFSDRPHLASVAGRGSDASRHLLERGLARINATPDRLERLKALLNREASMLTLVDQVNEETKEIIRRMWRNNFV
>NZ_CP006003.1|WP_046712716.1|3883139_3883604_+|CesD/SycD/LcrH-family-type-III-secretion-system-chaperone
MPEDPQDETQLAARLQRWADGKSTLREVRGYSNDELYAIAKTAYFFFYQGRINEARTLFQGLYAVNPTDGYFAKALGVVEMAAGNGQGALAAFDVAAKLSPQDPSVYVGRAEVKLALGQKQQALEDLRRAAAMTPQDDPVVRKAGAMVTALTRR
>NZ_CP006003.1|WP_046712717.1|3883726_3884320_+|hypothetical-protein
MSTQKAKMGALPPEPAALVEKREKLLAELEKQSKTAEGTFLQVVRTMKMLVSSTTPGAPFDERLYADVSGALERFMADPILPVPPALGMVVSYLSERLNTYGMTIQNAVKEANPEMHAKLAFTPPSAPQAPAPAAPAAAARAPAAKDGFESGSSRRGLALDPEASPPPPAADPKNEQQKLEGFKAWMKNPSLGKIKG
>NZ_CP006003.1|WP_046712718.1|3884475_3884694_+|hypothetical-protein
MSISANFNAAASSILAGSKASNDMIAAAPKDQQPFLRAQEQMQREAKLVELISNSMKKIEQMQSAIVGNMRG
>NZ_CP006003.1|WP_046712719.1|3884871_3885327_+|hypothetical-protein
MVAPVNGGSRSIPSQKTASESTTQTPSDPAAERAKQKSTMDGIRKKDETKLTGGDRENYANAKGTDLLLENKPFLGFFPDSVSETIAKKMDEDVASYLKQHPDASLKDIDSHIGERFKTHMFSAVVAQKGVDMAIANLKKQLQKIRDGFDD

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Crispr_ID: NZ_CP006003_17

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP006003_17

3898314-3898414

Orphan

Consensus_repeat	Method
GCCGCCGCGAGCTTCTCGGGGGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP006003_17

>merge|NZ_CP006003|17|3898314-3898414|CRISPRCasFinder
GCCGCCGCGAGCTTCTCGGGGGTGTGCCCCGGGTTCTCGGAGGCGGTGCGTGCATCCCTCCGCTCCGCGCGCTGCGCCGCCGCCGCGAGCTTCTCGGAGGT

>NZ_CP006003|17|15|3898314-3898414|CRISPRCasFinder
GCCGCCGCGAGCTTCTCGGGGGT	GTGCCCCGGGTTCTCGGAGGCGGTGCGTGCATCCCTCCGCTCCGCGCGCTGCGCC
GCCGCCGCGAGCTTCTCGGAGGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP006003.1\|WP_046712721.1\|3886000_3888124_+\|EscV/YscV/HrcV-family-type-III-secretion-system-export-apparatus-protein	unknown	unknown	gnl\|CDD\|376386
NZ_CP006003.1\|WP_046712731.1\|3905689_3906688_-\|MoxR-family-ATPase	unknown	unknown	gnl\|CDD\|223786
NZ_CP006003.1\|WP_046712728.1\|3902567_3903584_+\|stage-II-sporulation-protein-M	unknown	unknown	gnl\|CDD\|376676
NZ_CP006003.1\|WP_046712723.1\|3889992_3891042_-\|FHA-domain-containing-protein	unknown	unknown	gnl\|CDD\|379873
NZ_CP006003.1\|WP_082165131.1\|3891076_3892138_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274350
NZ_CP006003.1\|WP_046712724.1\|3892238_3892757_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|335531
NZ_CP006003.1\|WP_046712722.1\|3888286_3889369_+\|DUF1521-domain-containing-protein	unknown	unknown	gnl\|CDD\|369385
NZ_CP006003.1\|WP_046712729.1\|3903623_3904064_+\|potassium-ABC-transporter-ATPase	unknown	unknown	gnl\|CDD\|238239
NZ_CP006003.1\|WP_046712730.1\|3904385_3905693_-\|DUF58-domain-containing-protein	unknown	unknown	gnl\|CDD\|224635
NZ_CP006003.1\|WP_046712720.1\|3885415_3885898_+\|type-III-secretion-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP006003.1\|WP_046712725.1\|3892698_3893514_-\|RDD-family-protein	unknown	unknown	gnl\|CDD\|377640
NZ_CP006003.1\|WP_046712734.1\|3909853_3910123_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046712718.1\|3884475_3884694_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_052770974.1\|3904020_3904383_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP006003.1\|WP_046712732.1\|3906684_3907968_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046712719.1\|3884871_3885327_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046712733.1\|3907960_3909850_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046717795.1\|3900983_3902483_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274350
NZ_CP006003.1\|WP_046712726.1\|3893707_3896836_+\|PBS-lyase	unknown	unknown	gnl\|CDD\|237999
NZ_CP006003.1\|WP_046712727.1\|3899311_3900871_+\|bifunctional-metallophosphatase/5'-nucleotidase	unknown	unknown	gnl\|CDD\|223808

Protein	Function_ID	Function_description	E-value
NZ_CP006003.1\|WP_046712721.1\|3886000_3888124_+\|EscV/YscV/HrcV-family-type-III-secretion-system-export-apparatus-protein	gnl\|CDD\|376386	pfam00771, FHIPEP, FHIPEP family.	0
NZ_CP006003.1\|WP_046712728.1\|3902567_3903584_+\|stage-II-sporulation-protein-M	gnl\|CDD\|376676	pfam01944, SpoIIM, Stage II sporulation protein M. SpoIIM is on e of four stage II sporulation proteins that is necessary for the forespore inside the mother-cell to be properly internalized through the breakdown of peptidoglycans trapped between the membranes of the septum separating the forespore and the mother-cell. The four proteins working in sequence are SpoIIB, pfam05036, SpoIIM, SpoIIP, pfam07454, and finally SpoIID, pfam08486. D, M and P are in a complex with each other and the complex assembles in a hierarchical manner such that M, which serves as a membrane anchor, recruits P to the septum and P, in turn, recruits D to the septum.	3.97391e-35
NZ_CP006003.1\|WP_046712723.1\|3889992_3891042_-\|FHA-domain-containing-protein	gnl\|CDD\|379873	pfam16697, Yop-YscD_cpl, Inner membrane component of T3SS, cytoplasmic domain. Yop-YscD-cpl is the cytoplasmic domain of Yop proteins like YscD from Proteobacteria. YscD forms part of the inner membrane component of the bacterial type III secretion injectosome apparatus.	3.73099e-24
NZ_CP006003.1\|WP_082165131.1\|3891076_3892138_-\|hypothetical-protein	gnl\|CDD\|274350	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein. This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.	1.29845e-20
NZ_CP006003.1\|WP_046712724.1\|3892238_3892757_+\|hypothetical-protein	gnl\|CDD\|335531	pfam03922, OmpW, OmpW family. This family includes outer membrane protein W (OmpW) proteins from a variety of bacterial species. This protein may form the receptor for S4 colicins in E. coli.	0.000144144
NZ_CP006003.1\|WP_046712722.1\|3888286_3889369_+\|DUF1521-domain-containing-protein	gnl\|CDD\|369385	pfam07481, DUF1521, Domain of Unknown Function (DUF1521). This family of unknown function is found in a limited set of Bradyrhizobium proteins. There appears to be a periodic -DG- motif in it.	6.95804e-14
NZ_CP006003.1\|WP_046712729.1\|3903623_3904064_+\|potassium-ABC-transporter-ATPase	gnl\|CDD\|238239	cd00412, pyrophosphatase, Inorganic pyrophosphatase. These enzymes hydrolyze inorganic pyrophosphate (PPi) to two molecules of orthophosphates (Pi). The reaction requires bivalent cations. The enzymes in general exist as homooligomers.	6.15046e-18
NZ_CP006003.1\|WP_046712730.1\|3904385_3905693_-\|DUF58-domain-containing-protein	gnl\|CDD\|224635	COG1721, COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) [General function prediction only].	3.56898e-63
NZ_CP006003.1\|WP_046712720.1\|3885415_3885898_+\|type-III-secretion-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	1.12657e-16
NZ_CP006003.1\|WP_046712725.1\|3892698_3893514_-\|RDD-family-protein	gnl\|CDD\|377640	pfam06271, RDD, RDD family. This family of proteins contain three highly conserved amino acids: one arginine and two aspartates, hence the name of RDD family. This region contains two predicted transmembrane regions. The arginine occurs at the N-terminus of the first helix and the first aspartate occurs in the middle of this helix. The molecular function of this region is unknown. However this region may be involved in transport of an as yet unknown set of ligands (Bateman A pers. obs.).	2.46696e-18
NZ_CP006003.1\|WP_052770974.1\|3904020_3904383_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	5.23574e-08
NZ_CP006003.1\|WP_046712731.1\|3905689_3906688_-\|MoxR-family-ATPase	gnl\|CDD\|223786	COG0714, COG0714, MoxR-like ATPases [General function prediction only].	1.13595e-97
NZ_CP006003.1\|WP_046717795.1\|3900983_3902483_-\|hypothetical-protein	gnl\|CDD\|274350	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein. This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.	1.17298e-09
NZ_CP006003.1\|WP_046712726.1\|3893707_3896836_+\|PBS-lyase	gnl\|CDD\|237999	cd00038, CAP_ED, effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO sensor. In all cases binding of the effector leads to conformational changes and the ability to activate transcription. Cyclic nucleotide-binding domain similar to CAP are also present in cAMP- and cGMP-dependent protein kinases (cAPK and cGPK) and vertebrate cyclic nucleotide-gated ion-channels. Cyclic nucleotide-monophosphate binding domain; proteins that bind cyclic nucleotides (cAMP or cGMP) share a structural domain of about 120 residues; the best studied is the prokaryotic catabolite gene activator, CAP, where such a domain is known to be composed of three alpha-helices and a distinctive eight-stranded, antiparallel beta-barrel structure; three conserved glycine residues are thought to be essential for maintenance of the structural integrity of the beta-barrel; CooA is a homodimeric transcription factor that belongs to CAP family; cAMP- and cGMP-dependent protein kinases (cAPK and cGPK) contain two tandem copies of the cyclic nucleotide-binding domain; cAPK's are composed of two different subunits, a catalytic chain and a regulatory chain, which contains both copies of the domain; cGPK's are single chain enzymes that include the two copies of the domain in their N-terminal section; also found in vertebrate cyclic nucleotide-gated ion-channels.	8.47033e-20
NZ_CP006003.1\|WP_046712727.1\|3899311_3900871_+\|bifunctional-metallophosphatase/5'-nucleotidase	gnl\|CDD\|223808	COG0737, UshA, 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism].	2.53008e-54

>NZ_CP006003.1|WP_046712726.1|3893707_3896836_+|PBS-lyase
MPPSATSSWNRRLLPAAAFQFALIAGVTQLKTAANALVLSRFDSQALPYLYLLGALITAALTVLPRFKPGSPFESPGVLTGLGGVVSMGLAVALSVGVSTSALALYLFADTFSTFVSFRFWARMASAFDAREARRAFTALNGFAMGGGIVGGLLVQGLAERLGTPAMVVSGGLGLLVAGAIFHHLYRGEPPPPPRGRPAPTSFMAFSYLAESPYAQVLAALGISFAVLSAFVDYLFRIRLEGQLSEDALAALFGSLQLWIGLFCVAFQLLLTQRLLKRLGLLRYVALVPLVLAPLAGATLVTPDLWPVHLLRLVETAVSYSILPVGIQLLYAAVPDDQREGLRAAVDGLLRKSGVVVAGLLLIGAGRAATGMSMAVAVVAMCAALALLLVRLKPAYVAALGEQVGAHEEEEVELEGEEEQRLLTEALSAPMPDRVLRAVDMMEQAEVSLRQHLPALLRHPHERVLERGVALALELEARELAPVLERLVEEGPRRPRDQAVWALARLSPERAERLLPALLNHPDVGLRCAAIGALVKSTGSAAALASLEELLARGEGAPVMERREVAKLLGRLQDARFAGPLARYLDDGDTTVRRVTLAAVGEGGYVELAPRLLPFLTWREERKTAREALIALGDAVTPLVEEHLNNKKAPLAMRLQLPRVLRGIGTPAALDALLFSNVRDDASLHFRIGAQLSRLRDEHPEHPVDVDRVREALGRRRDTYRALVGAYRDVRAALGDGSLLTRAVGDRLDQALELSFFLLGLLDSSHRMRGIHYNLVGQDARRRALALELLDNLLSEEDRELVMEQVEAHHRELPPGASGRLWRRLAALVQSEDVVLRACARHIARVNGLDVLPQEGELSDRIVQRMFELEGVSVFSQSDVDDIAAIAAVAREGFFRAGERIYAQGDPGDALYVIVDGAIDAFHDGEHVLRFQGKQAFGEVSLLDGAPRPTDMVAAVDTRVLIIDRRDFLDLLADRPELLTGFFRAVSLQLQALIALPDSRETGERLEMTAPAAPTAPPLPTGPAPEGSEPPTMEKRTRGGDA
>NZ_CP006003.1|WP_046712725.1|3892698_3893514_-|RDD-family-protein
MTTATDTLLDGTHTVLTPEYVEFRFTLAGLYSRFLAWLLDSVIVVVISLAVILGLSLVMAAFPGVASALGIVVYFLVDWGYGITLETLWSGQTVGKRALSLRVIQESGVRIGFYHAALRNLARPVDRLPLLYLVGGVTALVSGSQQRLGDMLAGTIVVRERRLKVPSAINASGEEGLLADPLFVSRVKRLSTEERELVLTAVLRRDELRMEARLRLFAALGARLQDALAMEKPAHLSDEKWTLLVAAALLPNARSTPPRPPTRSASSASSR
>NZ_CP006003.1|WP_046712724.1|3892238_3892757_+|hypothetical-protein
MRTLLCAFTFALALLGAAPAHAQFANRSLGLSLGYMDFNRTKGLDDAFFLGIDASLYIENGFELVSLSKVAFPRDTTDPARKRVVGLAPSLGIRYLLMEESIRPYVGSDISYLIVFKESMSNFVGIGPNVGVDFFTSDSVSVGLRAQYNFYIALNEKTQNSLTLSAGVAAYF
>NZ_CP006003.1|WP_082165131.1|3891076_3892138_-|hypothetical-protein
MRLARLVTTVSLVCVLPLAGCLSTPPPHERALINNELCTQELHNQNLVKAEVYCDLGLEFSPQYADLWANKGIIAMMSGRKEDAKKHFIKALRYNQEHLQSYQNLGYLYNEEGAYGKAHDNFRRALKVNPDNLETRYNLAFTMMKMKKYTEAKKELRTLLAINPNLAAAHHTLAIIAFEENQYEEAAEHLAQSAATDPNNPDVWHDYGNTLMELGRFVDAREAFANCNQLDPKMTSCVNNLALAQRKAALTDAGLREVKDTQQAENSAPSLFTLARTYREKGLLAEEETTYKKCVKLDGKYAPCHFGLFELFQDANKHEHAEVACKNFMKYATSEEFPTEYQTCEKYLSNATF
>NZ_CP006003.1|WP_046712723.1|3889992_3891042_-|FHA-domain-containing-protein
MSVRLTVTQRSEAGAKGTEHVLTESVITLGRDKSCQVVLAQQAVSRNHARICQEGTLFFLEDLGSAYGTQVNGKPLPKGEKRLLRNGDVIAIAQYDVRFDKVTELINADATSEKTSFIARDNLKDVMRGLSSSEERYLRIMNGPREGERIEIADASELVIGRDEKDVDIVLKDDLTSRKHAKIRRDWSGTHVEDLGSRNGIKVNKKRVNRKALKDNDEVEVGGTRFLYVDPAEPAEEPVQLATDVKKAPPPSPSRPAPVRKEKPPEPEPEPEPAPPEPEPEPAPPEPEPEPAPIEEPIQSSQENSVPDEVAPGGAMAMLKDKQKLVPLVVMGVVGLVFLVLLIAVVAGA
>NZ_CP006003.1|WP_046712722.1|3888286_3889369_+|DUF1521-domain-containing-protein
MTSVNQAGNASRTLSTGSTKVGLSDAELTKNLGLIEKTVESAFADIESAVKALNQLSENSFSTEQVRVSDLTANVDSGNVFPTEKPLIDENTFRSPDKLKVDDKGTITTPGGYKIEQLGQFEWKISGPDGKSTRIWGDPHVDESDGGKFDFKRNTTFQLPDGTEINCTTVPWGNNGMTVTGKLDITNGADHIAVTDIDKGKGKVGELTKDGYETTVAFQWNDTFQNNSRDLLVMGKNSDDWANQGKEVLGDEGGGATFKHGNDLEFEYKDTPSVLNLLPEPAKDKKDTSKAGDVTQQRDALMQKVNDHITQAIAVLGKPKESEKEQPLEDRFKSVADMFKALDEINSLNDMVKPRSNIFI
>NZ_CP006003.1|WP_046712721.1|3886000_3888124_+|EscV/YscV/HrcV-family-type-III-secretion-system-export-apparatus-protein
MSASNPNSFLSKYSDIVLAIVVVAIVGMMIVPLPPLLLDVLLTLNISISVVLLLVSLYVPAALHLSVFPTLLLITTMFRLSLTISTTRLILLTGDPGEVVVAFGNFVVQGNFVVGAILFLILVIVNFIVISKGSERVAEVAARFTLDAMPGKQMSIDADLRAGSIDQDQGKKKRRDLERESQLFGAMDGAMKFVKGDAIASIIITVVNIVGGLIIGVTQKGMSAGDAAQKYTLLTIGDGLVGMIPAILISTCAGIIVTRVGGEEEGAHLGKDMGTQLTAYPKAIAIAAGMLIVLGLVPGLPKIPFFLLGFGAGFGAWTMLKKQKQDQMVEEAGPAMESDLGTPMSSEPAPKEPMNPDSELFIPVVTPIVLEVSDALVPYVDSRQDNGKFLFELIPFMRDGLFVELGVRFPGVRARGNSSLPPGAYQIQINEVPVVTGQATLGHVLVNDTVDRLRLMNIQGFEAINPATRQPAAWVPEQHRDTLEAAGLTTWDVPGYIILHVAAILRRNAREFVGVQETQTMLEQLEKAFPAIVKEVIPKVVNVLKLTDILQRLVEEEISIRDLRGILQALSEYGQVEADNVMLTEHVRASQRRYISHKYARGSGTLVVYLLDPNIEEAIRGSIKRTSAGAHLALEPELAQEIVQAVRSECGHLPPSAQRPVILTAMDIRRYVRKLLEYEFNPSFSVLSYQELSPELNIQPVARISTR
>NZ_CP006003.1|WP_046712720.1|3885415_3885898_+|type-III-secretion-protein
MTTTQAKAPVSENDVKPLSGPALLERATQGFDLFQEGRFQESLALFEELAGMDGSEAYFQTALGACHLALENLDQAEAYFNRAIELDPSDLTPFVNRGEVHLRQGKVMEAARDFNHAVSLDPEGKDPLSDRARKLAAAALESVEAAQSGGAERDSGSESP
>NZ_CP006003.1|WP_046712719.1|3884871_3885327_+|hypothetical-protein
MVAPVNGGSRSIPSQKTASESTTQTPSDPAAERAKQKSTMDGIRKKDETKLTGGDRENYANAKGTDLLLENKPFLGFFPDSVSETIAKKMDEDVASYLKQHPDASLKDIDSHIGERFKTHMFSAVVAQKGVDMAIANLKKQLQKIRDGFDD
>NZ_CP006003.1|WP_046712718.1|3884475_3884694_+|hypothetical-protein
MSISANFNAAASSILAGSKASNDMIAAAPKDQQPFLRAQEQMQREAKLVELISNSMKKIEQMQSAIVGNMRG
>NZ_CP006003.1|WP_046712727.1|3899311_3900871_+|bifunctional-metallophosphatase/5'-nucleotidase
MNSTPCYRFRPSRQSRLSGVLVLALGALAGCEKSSPPPAAPATEQPDAAPAKPAVPSEVTLLVTGGTFGQLQPVEGKGGAAELLGQWVNNEKHCPGPVKDGQATCADSGTLALATGDHWNGPALSSFFLGAPTAEVMGRMGYAASAMGNHELAFGKEAFLKNRASGGFPFLAANLRVKDPALAGDLSLPAFQVFDRRGLKIGVVGLASEKTVRTAMAGRAEGLEVTGYEEALASAVPEARKAGADTVVVVADTCVTELQPVVAKHPEWKLSLVAGGRCPAQVYSKENGTIFASLDRGFSKYLRAHITFDPAKPAGEKVTQFEGKLVDVAGGTPDAETAQLVAKWKAQLDEVLGQQIGFTKTGITQASPQMAKWIAGAVRESLGTDAAILNKGGIRGDLPAGAVTRGSIYSVMPFENSVLVVKLKGEDLAKQLANPNALISGFTAAGKGKFKDAKGKALDPAKEYTVATVEYLYFGGDGFEFEKLAPEPTETGMAWQTPVVDWTKQLDSNEKKPLEKQLK
>NZ_CP006003.1|WP_046717795.1|3900983_3902483_-|hypothetical-protein
MALLGCLLACVTGCSSMRALCPLEGGRPWVEVKSPHFTVRTNLDVETSAEAARELEMMRQGLLQAWGGSFDPPGTVEVIVLRNRRELSEFTQVSIEGFSATMAEGPVLVMAGHSYALSEEGADISTQAHELTHYLSQFALVRQPRWLSEGLATYLETIALKPEKQEVVLGAKHGPFLDIARRQGWRTLDELWEWDRRGPMSSAESQQYYVSAWLWVHFFISQHAERFERFQKRLMGGEDPRVAWDAAFHGVKDLAGQVHAYALGTVPMRSPTITAPLLPVSGDIDIRPLEPAEVHAIRARLFLMTPGGATPEERLEKAEFEMAQALKEDPGNLTVALLRIRNTAEPEEQLALARELVGRRPESGRAWDALAQALDAAGYATEEQEAARLRAVELIPDNVGAQEGLARYYARTAQPERGLAAAQRALALAPGNASVLDTYSTILFQLGRCQEALATQQLAVEVLYEGTPVRLSQTVHDTLARYEAVCGAAPSATSPIGGE
>NZ_CP006003.1|WP_046712728.1|3902567_3903584_+|stage-II-sporulation-protein-M
MEMAEFIESRRPRWEKLERLLDQSETRGLRGLSLEDARTLGKLYRAVSSDLLWVRARSGSADVSAYLNDLVGRAYALTYPGRRPRFADVWGFVARGFPALFHREVRMYIAAVLLFLAGGGFGYLGMLVDPEAAHYLVPAEHLDLDPVQRAADEAKGDGMTADQQAHFSSYLFTHNIQVAFLAFALGVTLGLGTAIMLFVNGLFLGALAQVYAAKGMAGWFWAWILPHGIPEVTAICIAGAAGLVIARGLVAPKGLTRGQALRMEAVTAVKLLFGTLALFVLAGFIEGTVSQIHPPKLSVAFKVTFALVVGAGVYAYLFSDWLRDAHPAEPGPDAPPAA
>NZ_CP006003.1|WP_046712729.1|3903623_3904064_+|potassium-ABC-transporter-ATPase
MLLLPPLPPLPEVLIECPRFSFVKRRADGSVDFVSPVPCPYNYGSIPGLVADDGDPLDAVVLGSRLARGQRVRLPVVGVLGFVDSGKGDPKVILGAAPMSAAERAGLESFFRVYALFKRGLHLLRGNDTDTRFTGWLPVPSVSSAS
>NZ_CP006003.1|WP_052770974.1|3904020_3904383_-|GNAT-family-N-acetyltransferase
MHPLFHLGDVTAHRIDDAEAERLQDFPTRGEAYLGLLLLEPGTRGRGLGAGLLAGYEDWLRASGQQVLRVGVSEPNPAALRFWTREGFQAETWVGPLTQGELSYRVLRMRKTLTAPAATP
>NZ_CP006003.1|WP_046712730.1|3904385_3905693_-|DUF58-domain-containing-protein
MIPTGRLWALFALLAVPMMAAGFFPGLGGAVLALDALALALAVVDFLWARSVRLEARRVLPQRLNVGVPNKVELRLVHRGGRTARVRVKDGVPESFTAAPDEATLELPPDSETRWVYRVTPARRGRFDFTEVTARVSGPLGLVLHERVFPTTQTISVYPDLRGASRLLLSGAALDLVNLGLRQLRRDGRGSEFARLRDYAQGDSARDVDWKATARRGRPVTRVLESERSQSILICVDAGRSMAAQVDGLTKLDHAVNAALFLAFVAVRNGDRVGLAVFADGVKTYLPPAAGRTQYRKMVDALYSTTPSLTYVDYLALFKELNVRLTRRSLLCVFTDFLDEEQASTMVAPLHRLARRHVPLCLSVKDTALQKLLRTPPPGPEESFQHAVASELLVDREMLKARVSQGGVQMLDVQPDDLSLAAVNRYLDIKARGVL
>NZ_CP006003.1|WP_046712731.1|3905689_3906688_-|MoxR-family-ATPase
MNANDPASPLVQTGSAVQAAHAIREGVLREVRKAVVGQDEVLELMLCGLIAGGHVLLEGVPGVAKTLMAKALARSIGSDFKRIQFTPDLMPADILGTSVFDLKSQGFVLVKGPIFTDLLLADEINRAPAKTQSALLEAMQERGVSLEGRNLPLSPLFTVFATQNPVESEGTYPLPEAQLDRFLLKIDVGYPAPEEEDAILASVHRGFDAGDLARAGVRPAVTKEGLLGARAALNEVNVEPPVLGYIRKLVAATRTSSRIRLGAGPRAGVHLLLASKALAALRGRNFVTPDDVRFLAGPVLKHRLLLSPDAELDGATPSDVLREVVQAVEVPR
>NZ_CP006003.1|WP_046712732.1|3906684_3907968_-|hypothetical-protein
MRDRLPLLAVGGLVLTVVLGSMLLSSARRGEFADTLSTYRAQEDGARALYLLAEESGLPVTRRMADLRIGATGSTTPVLLAVEVQGSREDDLEQTQLAAEPDAGLGDEDVPRTGFNTFRASALDDREVTELLTHVSAGGSAVYVPWGSRENPLLDALSVKLIKADTTLPMRTLVPPFPSPYTLGVERVEVKVQAYLELPATAVPVLEDERLGRMVAAVVPHGQGRVLVLGAPELAMNVALSRADNAQFWLSTLAALGPGPYEFDEFHHGFTNERSVVDFARRYGLHYAVLQLLAGVALWSVALKRFGRPRPPPESVRVGATDALFAMARLYREGRHHGFAAKLVARGLTQELALHAGLPAHAAPTAVSEALKERGREDLARGLREVVGRADTVNNDSDLQQLTARAAMLRQGLHPAGPVRRSTSGTP
>NZ_CP006003.1|WP_046712733.1|3907960_3909850_-|hypothetical-protein
MAVSALELRPRNAIAVMDAALRLCARSTGVWALTLPGGAAVIASVLYLAEAMRMGHSLVLPSLAFTLAWFMRGVGQSAAAHHVQAVLLGPAEPTTWASLKAVLARLPSVFVAVAYLFVFNWLLFNLTLGIAFFVVSAQSVGYAAVMEGRGSVLRLYGQCSRLLGPARGTALKVRFLMSVQVLVFFNLHIGLNFLLMMARKLLGVDLTFAERYASLDNMPWLLFLAALTFTLFEPVRAAAATLLLVDGRVRQEGLDLLAAAQQLPTRATGKPLGQRSAAMLAVLLGLGLLTGTPARAQEDAPRAPVTSSREAVRRLGQVAVACEVAGPEEDARFEQLGALGTGERGKLDRLVRAVERQAYDDEDCDSALGTLEQGLEQGSRTVQAQAAVDARQASARAKDILARPEFAVAPPVEKAAEEPAEPTQPPDWWRRFTTWLGEFLKKLFERDEAPPTRNFTPPVVSGGAVANTLVVVIAGLTVAVLLYVLWSALKKNVRRKAGEGLEVSTLDASTLAGDAGHALSRPPEGWAQLADELAAKGAYREAVRSLYLALLSRLHRDGAILYDVTLSNWDYLSQFKGRMEWKPRFRELTLRFDFAWYGNTPVGSSGYQEFRALSAPMLAAPTPQEAAGA
>NZ_CP006003.1|WP_046712734.1|3909853_3910123_-|hypothetical-protein
MIQGSGRCHYHPERAGLGVCVECRRVICRECTTQFEGINRCASCLGRRLQALEGPAERREWTLGSGLLAMAGLGLVWGAVYMTLHLVTG

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Crispr_ID: NZ_CP006003_18

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP006003_18

4356333-4356496

Orphan

Consensus_repeat	Method
CGCGAGTGTTCACGCGACCTCCCGATGCGGGAC	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP006003_18

>merge|NZ_CP006003|18|4356333-4356496|CRISPRCasFinder
CCGTCGCGCTCACGCGACCTCCTGAAGCACGACAGGTTTGAACGCGGCGAAGATGCGCGCGTGGAGGGCGCGAGTGTTCACGCGACCTCCCGATGCGGGACCTCTGCGGTTGCGGCGAGGTGCGAGACCATCGCGAGTGTTCACGCGACCTCCCGATGCAGGAC

>NZ_CP006003|18|16|4356333-4356496|CRISPRCasFinder
CCGTCGCGCTCACGCGACCTCCTGAAGCACGAC	AGGTTTGAACGCGGCGAAGATGCGCGCGTGGAGGG
CGCGAGTGTTCACGCGACCTCCCGATGCGGGAC	CTCTGCGGTTGCGGCGAGGTGCGAGACCAT
CGCGAGTGTTCACGCGACCTCCCGATGCAGGAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP006003.1\|WP_046713036.1\|4352730_4353684_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046713040.1\|4358520_4358775_-\|acyl-carrier-protein	unknown	unknown	gnl\|CDD\|223314
NZ_CP006003.1\|WP_046713029.1\|4340464_4342294_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_CP006003.1\|WP_046713047.1\|4367068_4368385_+\|DNA-polymerase-III-subunit-delta	unknown	unknown	gnl\|CDD\|273455
NZ_CP006003.1\|WP_046713032.1\|4348546_4348864_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046713042.1\|4359453_4360002_-\|acetyltransferase	unknown	unknown	gnl\|CDD\|100053
NZ_CP006003.1\|WP_046713028.1\|4339751_4340468_-\|DNA-binding-response-regulator	unknown	unknown	gnl\|CDD\|223816
NZ_CP006003.1\|WP_046713046.1\|4366037_4367072_+\|DNA-polymerase-III-subunit-delta'	unknown	unknown	gnl\|CDD\|379051
NZ_CP006003.1\|WP_046713043.1\|4361054_4363460_-\|permease	unknown	unknown	gnl\|CDD\|274576
NZ_CP006003.1\|WP_046713037.1\|4353749_4354745_-\|NAD(+)-synthase	unknown	unknown	gnl\|CDD\|179150
NZ_CP006003.1\|WP_046713034.1\|4350770_4350977_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_052771000.1\|4360003_4360867_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046713041.1\|4358866_4359457_-\|acyltransferase	unknown	unknown	gnl\|CDD\|100053
NZ_CP006003.1\|WP_046713044.1\|4363609_4364290_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046713045.1\|4364458_4366039_-\|mechanosensitive-ion-channel-protein-MscS	unknown	unknown	gnl\|CDD\|366370
NZ_CP006003.1\|WP_046713031.1\|4343493_4348416_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|341059
NZ_CP006003.1\|WP_046713033.1\|4349891_4350647_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|130902
NZ_CP006003.1\|WP_046713035.1\|4351077_4352523_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379241
NZ_CP006003.1\|WP_046713039.1\|4356540_4358508_-\|asparagine-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|223444
NZ_CP006003.1\|WP_046713027.1\|4338829_4339585_-\|energy-transducer-TonB	unknown	unknown	gnl\|CDD\|367555

Protein	Function_ID	Function_description	E-value
NZ_CP006003.1\|WP_046713040.1\|4358520_4358775_-\|acyl-carrier-protein	gnl\|CDD\|223314	COG0236, AcpP, Acyl carrier protein [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism].	1.41801e-08
NZ_CP006003.1\|WP_046713029.1\|4340464_4342294_-\|sensor-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	8.16896e-37
NZ_CP006003.1\|WP_046713047.1\|4367068_4368385_+\|DNA-polymerase-III-subunit-delta	gnl\|CDD\|273455	TIGR01128, DNA_polymerase_III_subunit_delta, DNA polymerase III, delta subunit. DNA polymerase III delta (holA) and delta prime (holB) subunits are distinct proteins encoded by separate genes. The delta prime subunit (holB) exhibits sequence homology to the tau and gamma subunits (dnaX), but the delta subunit (holA) does not demonstrate this same homology with dnaX. The delta, delta prime, gamma, chi and psi subunits form the gamma complex subassembly of DNA polymerase III holoenzyme, which couples ATP to assemble the ring-shaped beta subunit around DNA forming a DNA sliding clamp. [DNA metabolism, DNA replication, recombination, and repair].	1.31194e-17
NZ_CP006003.1\|WP_046713041.1\|4358866_4359457_-\|acyltransferase	gnl\|CDD\|100053	cd04647, LbH_MAT_like, Maltose O-acyltransferase (MAT)-like: This family is composed of maltose O-acetyltransferase, galactoside O-acetyltransferase (GAT), xenobiotic acyltransferase (XAT) and similar proteins. MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates. MAT acetylates maltose and glucose exclusively while GAT specifically acetylates galactopyranosides. XAT catalyzes the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and streptogramin, among others. XATs are implicated in inactivating xenobiotics leading to xenobiotic resistance in patients. Members of this family contain a a left-handed parallel beta-helix (LbH) domain with at least 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). They are trimeric in their active form.	6.33385e-29
NZ_CP006003.1\|WP_046713042.1\|4359453_4360002_-\|acetyltransferase	gnl\|CDD\|100053	cd04647, LbH_MAT_like, Maltose O-acyltransferase (MAT)-like: This family is composed of maltose O-acetyltransferase, galactoside O-acetyltransferase (GAT), xenobiotic acyltransferase (XAT) and similar proteins. MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates. MAT acetylates maltose and glucose exclusively while GAT specifically acetylates galactopyranosides. XAT catalyzes the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and streptogramin, among others. XATs are implicated in inactivating xenobiotics leading to xenobiotic resistance in patients. Members of this family contain a a left-handed parallel beta-helix (LbH) domain with at least 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). They are trimeric in their active form.	1.57888e-19
NZ_CP006003.1\|WP_046713028.1\|4339751_4340468_-\|DNA-binding-response-regulator	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	2.85499e-80
NZ_CP006003.1\|WP_046713046.1\|4366037_4367072_+\|DNA-polymerase-III-subunit-delta'	gnl\|CDD\|379051	pfam13177, DNA_pol3_delta2, DNA polymerase III, delta subunit. DNA polymerase III, delta subunit (EC 2.7.7.7) is required for, along with delta' subunit, the assembly of the processivity factor beta(2) onto primed DNA in the DNA polymerase III holoenzyme-catalyzed reaction. The delta subunit is also known as HolA.	7.2756e-65
NZ_CP006003.1\|WP_046713043.1\|4361054_4363460_-\|permease	gnl\|CDD\|274576	TIGR03434, ADOP, Acidobacterial duplicated orphan permease. Members of this protein family are found, so far, only in three species of Acidobacteria, namely Acidobacteria bacterium Ellin345, Acidobacterium capsulatum ATCC 51196, and Solibacter usitatus Ellin6076, where they form large paralogous families. Each protein contains two copies of a domain called the efflux ABC transporter permease protein (pfam02687). However, unlike other members of that family (including LolC, FtsX, and MacB), genes for these proteins are essentially never found fused or adjacent to ABC transporter ATP-binding protein (pfam00005) genes. We name this family ADOP, for Acidobacterial Duplicated Orphan Permease, to reflect the restricted lineage, internal duplication, lack of associated ATP-binding cassette proteins, and permease homology. The function is unknown.	0
NZ_CP006003.1\|WP_046713037.1\|4353749_4354745_-\|NAD(+)-synthase	gnl\|CDD\|179150	PRK00876, nadE, NAD(+) synthase.	0
NZ_CP006003.1\|WP_046713045.1\|4364458_4366039_-\|mechanosensitive-ion-channel-protein-MscS	gnl\|CDD\|366370	pfam00924, MS_channel, Mechanosensitive ion channel. Two members of this protein family of M. jannaschii have been functionally characterized. Both proteins form mechanosensitive (MS) ion channels upon reconstitution into liposomes and functional examination by the patch-clamp technique. Therefore this family are likely to also be MS channel proteins.	1.22117e-35
NZ_CP006003.1\|WP_046713031.1\|4343493_4348416_+\|hypothetical-protein	gnl\|CDD\|341059	cd09596, M36, Peptidase M36 family, also known as fungalysin family. The M36 peptidase family, also known as fungalysin (elastinolytic metalloproteinase) family, includes endopeptidases from pathogenic fungi. Fungalysin can hydrolyze extracellular matrix proteins such as elastin and keratin, with a preference for cleavage on the amino side of hydrophobic residues with bulky side-chains. This family is similar to the M4 (thermolysin) family due to the presence of the HEXXH motif in the active site residues, as well as its fold prediction. Some of these enzymes also contain a protease-associated (PA) domain insert. The eukaryotic M36 and bacterial M4 families of metalloproteases also share a conserved domain in their propeptides called FTP (fungalysin/thermolysin propeptide). Aspergillus fumigatus causes the pulmonary disease aspergillosis by invading the lungs of immuno-compromised animals; it secretes fungalysin that possibly breaks down proteinaceous structural barriers. A solid lesion known as an aspergilloma can grow in a lung cavity, particularly following recovery from tuberculosis. Fungalysins are also found as multiple copies in the human and animal pathogenic fungi such as Microsporum canis, Trichophyton rubrum and T. mentagrophytes, which cause cutaneous infections.	3.73966e-41
NZ_CP006003.1\|WP_046713033.1\|4349891_4350647_-\|hypothetical-protein	gnl\|CDD\|130902	TIGR01843, Hemolysin_secretion_protein_D_plasmid, type I secretion membrane fusion protein, HlyD family. Type I secretion is an ABC transport process that exports proteins, without cleavage of any signal sequence, from the cytosol to extracellular medium across both inner and outer membranes. The secretion signal is found in the C-terminus of the transported protein. This model represents the adaptor protein between the ATP-binding cassette (ABC) protein of the inner membrane and the outer membrane protein, and is called the membrane fusion protein. This model selects a subfamily closely related to HlyD; it is defined narrowly and excludes, for example, colicin V secretion protein CvaA and multidrug efflux proteins. [Protein fate, Protein and peptide secretion and trafficking].	0.00369114
NZ_CP006003.1\|WP_046713035.1\|4351077_4352523_-\|hypothetical-protein	gnl\|CDD\|379241	pfam13529, Peptidase_C39_2, Peptidase_C39 like family.	2.41879e-10
NZ_CP006003.1\|WP_046713039.1\|4356540_4358508_-\|asparagine-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|223444	COG0367, AsnB, Asparagine synthase (glutamine-hydrolyzing) [Amino acid transport and metabolism].	6.87586e-131
NZ_CP006003.1\|WP_046713027.1\|4338829_4339585_-\|energy-transducer-TonB	gnl\|CDD\|367555	pfam03544, TonB_C, Gram-negative bacterial TonB protein C-terminal. The TonB_C domain is the well-characterized C-terminal region of the TonB receptor molecule. This protein is bound to an inner membrane-bound protein ExbB via a globular domain and has a flexible middle region that is likely to help in positioning the C-terminal domain into the iron-transporter barrel in the outer membrane. TonB_C interacts with the N-terminal TonB box of the outer membrane transporter that binds the Fe3+-siderophore complex. The barrel of the transporter, consisting of 22 beta-sheets and an inside plug, binds the iron complex in the barrel entrance.	3.1503e-13

>NZ_CP006003.1|WP_046713037.1|4353749_4354745_-|NAD(+)-synthase
MKFSKQVLELDWEAKAAELSEGLRETVLKKLRKRGLVVAISGGIDSACVAALAVRALGPERVFGILLPERDSSGWSSQLGRKLCEKLGIKYQLHDIAPILEAAGCYRQRDEAVRSVFPEFTPDMKWKIVMHGDRLNTDAVNFFYVVVQVNGEERRFRLPPQAYTQIVAATNFKQRTRKMMDYFHADRLNFAVAGTPNRLEYDQGFFVKLGDGAADVKPIAGLYKTQTYQLARHLGVIEEITSGEPTTDTFSLPQSQEDFYFSVHYSQLDLLMWAKNHDVPTDEAAQVMGLTPTQVQRVYDDIDQKRRSTAYLHSPPLLLEKVPELEPFKLG
>NZ_CP006003.1|WP_046713036.1|4352730_4353684_+|hypothetical-protein
MCLWAGLAAAQQQPLTGVYAREGGTLVVLEGDGQTLVQYESTFPQGQSMGACECTFAVQKKTSPKSWALTTFQSQGKWTLSLEPNKLVLKGPGTDCCGAGWSGQDSFSRPFTRALSTCTVKAKEARLQPLDGTRQGPTVVSGDKVEAHAASPLPDVVPVRVVKGAQAVTGLLPGGELECGTQAAGVDAASAGALKALAGKWLQVSRKGKGYLIEEWCGANTPSVTVDAAGSILVDFGQDDLTGQVKSVKPEARGGSTLQVAYPSGASETLKWTVTDAKRNVMRVQGGKDYFREGYLYVRDDARKDIPVKAEVCEEEE
>NZ_CP006003.1|WP_046713035.1|4351077_4352523_-|hypothetical-protein
MSPRIERRPQTNSPTSVQAEGLPQGRDAQLNLQQLWPYIEKYAQKYGADPKVLAGIVAQESSFKNHGVHADGTGHGLIGLDDNGLLPSFEKWSGMQVGRGANAKTIPPEKQMEFLAKTIGDLTKKHGSGMAAAREWHRGAGNMNDARGYDYQNKIQNHMNRLFPGGKTPSGTTANVPDTTVGGTDTSKPGNKPGLAPGKTDDSRTPVAASDREIKKGDTLWGIASELKAKGMEGSHWDVINQIRQLNPKITDPNLILAGDTLKLPGIAGKDQSTFTPGTNKPGPVDLNPKPTGPQATDGAAPVTGDGRVDPSKVPQISQYNPAGKDGSYTNGAANCGPTSMAQIARAFGYGKDMTDAQLISHLGKAGGTSGNGTDVNGIAKMAKAMGKDAVTKGPGANVEWIADQLKQGKLVVANGDYHAMPPHQNEGRTSGHYVTVAGMDAKGNFIVRDPADANVKTITPEQMRHFLNSNPNGGYQMSIG
>NZ_CP006003.1|WP_046713034.1|4350770_4350977_-|hypothetical-protein
MTQSKQTQTCISCKKTEGGEVVGSTYVSTGDNGMIVRFWMCDECALPLGPGQGPIDMDDPAKAEQPRS
>NZ_CP006003.1|WP_046713033.1|4349891_4350647_-|hypothetical-protein
MNKLLGPASFVLASAALAVALWAPGRVEAPSPSQTPEPVTERPANQEALERRIQALEDTTLSLSRRLMELEKQPGTGAVPTGGGTAVAAGELEQLRNEVRGLMAGETLTTEGGREALKDAMRSVQQEMRNEQLNRRQEEWMQAQARGQEQRQERVKRLVSEAKLNYSQEQELTRRLEQEETSRNTLFEEVRAGTKSARDIRQALRTQREETDQVMKGMLDADQLSKYQVMRREEQMNSRPRGPREGRFGDQ
>NZ_CP006003.1|WP_046713032.1|4348546_4348864_+|hypothetical-protein
MRMTRTWNQALRWTCCAAMVWTLGCKGGGEEQRRDAASAPAAEAPASVEVPKSEERPRVAEPEVDAGPTVCPEGQYPCCDGSCGDSKGCPGIACDPRRMPPTMTK
>NZ_CP006003.1|WP_046713031.1|4343493_4348416_+|hypothetical-protein
MKRLWMGTVSAVLAVLMWSPPVSARGASVDAFLRSPADRSLPSSAANAPQRGLRINSVEGRLGVPTFVFSERALNATSAPKAARPLTKASVNASAREHLRGVADLYRLGSADVDGAELRQVHLPKDNDGAVIATYGRRVNGIEVFRNEVKVVMDPSQQLVAISGYLQPRNKDDEKNAQASAFRVSAPQAIARAFQDVTGASLDARALAPAGSQGDYSHYQVDRNLLSTHGFGDAPRAKKVLFPLPDGLVPAYYVEVNAGLASNPDANYVAFVVNAQDGSVLFKHDLTKSEAFTYRVWADPATKLPYDGPQGSGATPHPTGEPNGYQEPLDNPANLVTLQNFPFSKNDPWLPANAQVTTGNNVDAYADLGGTDGYQEGIDLRAPLSNAGSRTFDYTFDVTKSPASSVEQRQAAVVNLFYVTNFLHDWFYDAGFDEASGNAQMSNYGRGGLEGDSLRVEAQDFGGRNNANMATPADGARPRMQQYIFDGVAELVVSEPSPIARGYLTYNASFGTRVYDVSADFVVPPSHEDPAIALGYRRGCADGTGADPYGGQKLFTGKVALIERGDCSFAFKVLNAQNAGAVAVIITNSATAALGTMGASGVPAVDNAITIPALLVSKPDGDIWRTTLESATIKARLRRNADLDRDGTLDNEIIAHEWGHYISNRLVGNGSGLTNNQGGSMGEGWGDFHAMMLSVREEDRGRDGNNDWQGTYGMAGYTQAGGRNNGYYWGIRRVPYSTNLAKNGLTLRHMADGTAIPADVESNPDYAGSNNAEVHNAGEVWATMLWECYASLLKAHPFAEAQDRMKRYLVASYKATPSSPTFLEGRDALLSVVAAADPADYQRFVAAFAKRGAGFGAQVADRDSADHIGVVESYQTGNALEVVSVTLDDSSVGCDKDGILDAGETGLLRVTLRNVGAENVSGVTATAAFNESSEGVAATFGGGNTLSFGNIARGSTAVATIPVSLTAAPAQASGALAVVGVDVTFPITLLNGATVHEFRTNVNYDEVANSSNTDYVETKNTSWTNSTFNNRPLWQNGHATTGFWHAANESESRDIRLTSPLFDVAQGQNFVLSFFHRHSFESAVISGQWVHFDAGVIEVSVDEGPWENWYLYLTAAERARLTNQGIIDAGNPYIGDWPGYVRMSSDYPSFIPAQTNFGRIFGGHQVRLRFRLGTDGFVGAYGWDVRNIRVTGITNTTPFYSRVAEAGSGTCNVAPIAEPGISQTVTEYIVNPNGTRTLRVITLNGSASFDPDAVAGSTLTYAWTQIGGPAVTLTGADTATPSFTAEVPAATIFTFQLVVSDGTDSSHPRVVQVLVNNVNAAPIAVARVKDNGPTTVDERLGSVTLDATGSTDADGEPLDFAWTQTAGPAVELDDDTSATPTFTPPEVTADTAFTFTLVASDGIAASAPASITITVRNVDRAPVANAGENQTVNQGSQVTLNGSATDEDDDTITYAWTQTAGPSVTLTGADAATATFTAPSVTGNSVDLTFSLVATAAGQASAASTVTVTVTRTNTKPVVSATSSYTVHEGSGVKLTATGTDADGDELSYRWVQVAGPTVKLDGAETAQAYFVAPDVSETTIFLFRVRANDGVANSDTVDVAVTVRNLTDSGGCTAAGGSATSALLPALAMLGLALRRRRK
>NZ_CP006003.1|WP_046713029.1|4340464_4342294_-|sensor-histidine-kinase
MLRRLLPTLVALGCGLLALGWGLVSLQRIFTREREDAHAQVRSRRDALAHAATESLRQVLARQLEEQVSAIHAAVDNPLAPGEGFYLQFRGHQFLPRLTRPLPGHDMPARALYETLADHLRDGATPGPWEARLARLRAAESALREGSPARATALVEELLRYHANHALPADQELPFLLLAVEHLQQGPRSTPLVRSLLREGLPEEFGGIGRGAGLQRDLLRERQRFTQADFDFLQARILLLSSALGEPMGDFLERSRETGAGALVMPEQLVEPTLLGQQWYVEPRGEVVYGIAVDIAAQLVPIAEDMRARGLFGNGGQVRLVGDRPAIPVRELPVRVDLPEWSRAEVDIEARYGLKTLLVAVCGVLAAAIVALAVVSQQRKYRFLELKSDFVATVSHELRTPLASIRLMGETLERKLAHAPEVRDYPTRIVQAADGLHFLVENILSFNRIDKGRWTLRPSRVRLEELVNPLRDDLAAATSTPVELTTDLNDAELEADPTLLRLLFSNLGRNACAYNQRKPVRLSVSARVIEGHGCTVLFRDNGVGIPDYEWENVFQDFYRLTPPGQDVHGSGLGLSLCRKIMKLHHGDIQVASSTPEGTTFALTFHEPRR
>NZ_CP006003.1|WP_046713028.1|4339751_4340468_-|DNA-binding-response-regulator
MTTNSPPSTTRPTILIVEDDAHLRVGLRDNLLDEGYVVSEAPSARDAEPLLREREFDLLILDVMLPGEDGYSFCRRLRAQGVKSLVMMLTARSLEDDIVRGFEAGAQDYLTKPYRLRELLARVGALVRRAGTAPAQVTTFGGYSLDLGRRTVTKPDGVGVELTRTEFDLLAYLLRHRDRALPRGEILDAVWGRDVVVDPRTVDNFVSSLKKKLGWTSASGFSIHTLRGVGYRMEVSSP
>NZ_CP006003.1|WP_046713027.1|4338829_4339585_-|energy-transducer-TonB
MFKSVIERQRAGRLGAGMGWSVAVHAALFGAVLVISARPAEVPPEPEPDIVIKLAARPQVAKGYAAPAQPKTQAAPPKPRKPKRDTFPTQISPVTMDPKPVDVEPEPVANTTDTGDTEPMGVPGGHPEGDPNSTVIGLPFVPGLPPGGTGEATGEDVIPFPSGMRAPVLLGGQPLDYTEQARVARVEGTVIAKCVITREGQVRDCRILKGLAHMDDHVTEALHSRRYSPVMFQGKAVSVSYVFTLRFKLPR
>NZ_CP006003.1|WP_046713039.1|4356540_4358508_-|asparagine-synthase-(glutamine-hydrolyzing)
MCGIAGFTYPAGGGAGAEAGERLVRMTASIRHRGPDAQRALVLNGVALGHTRLSIVDLEGGHQPMRDAATGLTVVFNGEIFNHVELREQLAGRYAFRTRSDTEVILAAFLTWGIDCVRRFEGQWAFALWDPRDSTLWMSRDRVGICPLYYAELPGGQLAFGSEAKALFASGLVRPALDARGLKQTFQLWSPVAPRTSFEGVRLLPPAHSARFRAGVLETFRYWDLDFGVEPSTASDARIQEELGEALERAVRLRLRADVPVAAYLSGGLDSSLLCALAQGQLGGTLRTFSVGFAHARFDEREHQAAVAGELRTEHRVVEMRDGDIGTLVPGVIFHAEQAMMRSAPAPFLRLSEWVRQNGIRVVLTGEGSDEMFLGYDLFKETKVRQFWARHPASKWRPLLLRRLYPTLSVSQQNVELLREFFGMGLEDPGSLGFSHLVRWANSGRISRFLAPDFAASVADEEPTASVLSTVPAHVARWRPLARAQYLEAKTLLSGYLLSAQGDRMLLGNAVEGRFPFLDTSVMELAARIPERMRLKGLDEKHVLKRYAKGRVPASILERSKFPYRAPIAGALVGPEAPTWARELLAPEAVAKVGVFDARKAERLVAKLRAPNAAESEADTMALFAIASTQLLAHHFLTPRAPPQADLDAVVLEAA
>NZ_CP006003.1|WP_046713040.1|4358520_4358775_-|acyl-carrier-protein
MSIRERIRTFIVDTFFVDDFGDDDSFLRKGLIDSTGMMELVAFLESDLGIKLEDKELVPENLDSLTRVVAFVERKQNQRLPQAG
>NZ_CP006003.1|WP_046713041.1|4358866_4359457_-|acyltransferase
MTSRSPFVRIPEVVAQLEEMGRAARPRAERAVAMVRARWQFRAVQSLGRNVAAYGPVSVHNEGEIVLGDRLTFSGGMLPSSLVCHPGGRLAIGNETQFNYGVCLEAWRSVSVGARCMFASFVRVGDRDGLHTAPIIIEDDVWVAHGAIIMPGVRVGARSVVAAGSIVTQDVPPDTLAMGNPARNMSLELVARDTGS
>NZ_CP006003.1|WP_046713042.1|4359453_4360002_-|acetyltransferase
MRPLHQSLSREWGKLMARLKLRRCQEIGDSPTVLGRVWIHGAGRVLVGHRVVLDGRLAPIELHAMSPQSVIILGDDAHIEGGASLEALSSISVGRGARLGPFSKVMDNQHHPLRGNRHERPPSVPLVIEEGVTVGSRAILLPGAQLQKGCTVAPGTVISRRIPAGVTVGGAPARVLRREVMG
>NZ_CP006003.1|WP_052771000.1|4360003_4360867_-|hypothetical-protein
MHFDWTFLVRVSVLALPAMLLMALHGTVAQASAPSAPLEKLSGRRIFFGHQSVGGNILDGVKALPNSAQGVVPRVVEVQSPTESLAPGTLAHAMVGQNEKPESKIADFERLMDAGLAKSTDVAFFKFCYVDINGATDTRALFEKYRVALEGLKARHPNTTFVHVTAPLTTVQRGAKAWLKELLGRPVWGVAENVQRETFNELMRKTYAGKEPLFDLARLESTAPDGSRETYELNGQTWPAMVPGYSDDGGHLNPAGQTRLATELLNFLASLPAPVVQPPIPAVQATP
>NZ_CP006003.1|WP_046713043.1|4361054_4363460_-|permease
MDSLRQDFRYALRTLRHTPGFTLAAVVTLALAIGANTVLFSAIHAMLLKPLPFREPETLVRLWCEQQDFLHASVSPPELLGWREHGRSFEQLAGFTRRDLSRTGTDAAERVRAARVTTNFFQTLGVTPAHGRDFQQEDAQPDNPPSSVVVSHAFWKKALGGASDAVGGTVQLDGRTYTVVGVLPEGFSFPDFGEDVDVWQPHWLNPEAHGNHYMGIVGRMAPGVTLEAATADLGRVAQLIARPGAPGDKHHGVTTDLWQRHLTSSSRPVLWALWAAVGFVLLIACANVANLLLVRALARQRDSAIRAALGASRGRRIQQALAESVLLGLVGGLVGLLLVMWGMELVRALLPPSMLRMTPVELSVPALLFSVALSLGAGLLFGLAPALHTSGADVLPLLKQSGSAVGARANHPLRNALVAVQLALALVLLVGTVLMVQTLRNMQAVDPGFDAEGVLHVRLALPDLKYGSLDKQRGFFADYLERLRALPNVEAVGMVNDAPLGGSNTNGDFVLEGAPQDPGRRYVTEFRVASPGYFQALRAALREGRDFDGRDSQKGAPSVIVNEAFVRKFLGGGEALGRRIRVDWSDSQPFRDIVGVVADVRHNRLTEPAQPEVYLPYEQYPVPTMSLLLRTSREPSTLVAAVRQELKAVDAEQPAYDVAPFVDRMDRQVSRPLATARLLAAFAALAVVLAGVGVYGVMAYAVGQRTRELGIRLALGAHPRQVLGLVMRQGLMLTLLGVGVGLLAAFGCMRLLATLLYGVKANEPVVFLGVAAALGLVSLLATWIPALRASRVSPSVSLRAE
>NZ_CP006003.1|WP_046713044.1|4363609_4364290_-|hypothetical-protein
MTTPRENPCVSVNQLGQYLTGTPSLRKRIIQGQKNPVDPQYLRYPAAAQAITEFLCEGRDEVILRYHQRRLLNAQADTDFDAHRLALCAEALQRCLVATDDLATRAVASPADPDLAPLDVAGVAVKVRPEVLLRGVDARGQMRSGVLKLYFSKHTPLDERAGQYIATVLQLFAEERLEQQGPVDPRLVGVFDVFAGRLFVAPKARQRRLQDVVLACEEIAGRWNFH
>NZ_CP006003.1|WP_046713045.1|4364458_4366039_-|mechanosensitive-ion-channel-protein-MscS
MARVSPLARHASTAALTLPVRAGESQGALLPFLQSNLSLAVGAILALVLLGTRASSQDADLKRDLTGALRLMVMFLILRVGAWAMPATTPPGPMKALQVAWMLTFAFGVIRAGVGFGLKLARLRSTSVATPKILRNVIDFLLYTLAAVPILQTQLDLDLTGLVATSAVLSVVIGLALQETLGNLFAGLSLQLDKPFEVGDFVRIGEHVGRVAQVNWRSIRIMTFRRELVTLPNSMVAKEQLKTFNQDREPVGVDTQVRASYDTPPNVMKAALLDVAREIPQVLVDPAPIARTLAFDEQSVRYMLRFFVNDFSLADALIAEVHTRLWYRLRRDGVEPPVPHRVVRMREDAARPELPAHTVLRLLRAVDLFEPLKDADLERLGQEVHVRRFGRDEHIIQEGDDGRTFYVLASGEVSVRAGKSQSEVTRLGQGGYFGEMSLLTGEKRAATVVALEDSLLLEVDRPTFARLFGEHPHLARQLSSILAQRRTQLRAVAQASGATGDPIPAEVGRILGRLRQIFGLHGAHHE
>NZ_CP006003.1|WP_046713046.1|4366037_4367072_+|DNA-polymerase-III-subunit-delta'
MTLASVLGQPRAIDSLQAALRSGAVHHAYLFAGPEGVGKERAAVGLAQALTCPEQPNVGCGTCASCTRVARGLHPDVTWVMPDDERVSRGLAGRSDFTGTPSRDLRVEQIRQLQERLALRGLESRRKVAILVSAQAMNVQAQNAFLKTLEEPPADTTLVLVASAMDKLLPTIRSRCSKVHFGPLPVELVAERVRTERKLDADTAQLAAIMAGGSLGRALSLDVEALARRKDVVTAFENLRGDNAVGLLRFADEHGGSREDAEATLELLTLWTRDVALAKAGREDALANRDLRQLAVDVGARLSDAWLHRRHALLDGARAAVARNGAPRLQLERMLIDLFTETSR
>NZ_CP006003.1|WP_046713047.1|4367068_4368385_+|DNA-polymerase-III-subunit-delta
MSSELDDVLAGVKAGKLSPLYLLWGEEFLVRKGADELVKVLVPDAAVGLNLVTLDAGSPREVAQELATMPLFPGRKVVVVRDPEFLAPKKGRGDPLAKAREAWKAGKRKEGARRLLALAARAGWGVDQLDPSAARAPSVEQWKEELNVDLAEADVAFLKEAAAFCKEERISAPEGDASALIELLQKGAPTGHALVMAATEVDAKNPLVKLAQDKGHVVERKVAARHKDLDLSDIAKEFLAPFKKKLGPGALEELKERVGGNIRLLQSELEKLATYSEGPAIERSDVVMLVHHAREEEFFELSEALQKRDFRGALSYAEDAMGQGTHALQLLGAVASIVRTLLESHEWLTRYAGGTPPRTAKDVEARVFPKLEAELKGTKRKMPNAWALTFSMKAAAGYERKELLGALVACAEADLALKSSGNGRLVIERLLATVCLGA

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Crispr_ID: NZ_CP006003_19

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP006003_19

5521350-5521457

Orphan

Consensus_repeat	Method
CGCGGGCGGCTGGCGCGAGCGCAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP006003_19

>merge|NZ_CP006003|19|5521350-5521457|CRISPRCasFinder
CGCGGGCGGCTGGCGCGAGCGCACCGTCTTGCGTCAAGGCCGCGACCCAGGCTCCTCGGTAAGGCTCCTTGCCTCGTGCCTGGGCGCGGGCGGCTGGCGCGAGCGCGC

>NZ_CP006003|19|17|5521350-5521457|CRISPRCasFinder
CGCGGGCGGCTGGCGCGAGCGCAC	CGTCTTGCGTCAAGGCCGCGACCCAGGCTCCTCGGTAAGGCTCCTTGCCTCGTGCCTGGG
CGCGGGCGGCTGGCGCGAGCGCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP006003.1\|WP_046713729.1\|5527737_5528580_+\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
NZ_CP006003.1\|WP_046713723.1\|5518156_5519977_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046713732.1\|5531132_5531912_-\|polymer-forming-cytoskeletal-protein	unknown	unknown	gnl\|CDD\|377376
NZ_CP006003.1\|WP_046713717.1\|5505494_5506043_-\|glutathione-peroxidase	unknown	unknown	gnl\|CDD\|223463
NZ_CP006003.1\|WP_046713730.1\|5528669_5529710_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237512
NZ_CP006003.1\|WP_046713727.1\|5525707_5526667_+\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|378976
NZ_CP006003.1\|WP_046713720.1\|5509479_5510022_+\|N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP006003.1\|WP_046718002.1\|5524195_5524675_-\|DUF1772-domain-containing-protein	unknown	unknown	gnl\|CDD\|227787
NZ_CP006003.1\|WP_046713731.1\|5529821_5531084_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046713725.1\|5522418_5524191_+\|N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl\|CDD\|119407
NZ_CP006003.1\|WP_046713728.1\|5526669_5527653_-\|Xaa-Pro-aminopeptidase-like-protein	unknown	unknown	gnl\|CDD\|223893
NZ_CP006003.1\|WP_046713724.1\|5521566_5522331_+\|DUF3592-domain-containing-protein	unknown	unknown	gnl\|CDD\|378822
NZ_CP006003.1\|WP_046717999.1\|5511766_5513122_-\|Na+/H+-antiporter-NhaA	unknown	unknown	gnl\|CDD\|377746
NZ_CP006003.1\|WP_046713719.1\|5508076_5509453_+\|amidohydrolase-family-protein	unknown	unknown	gnl\|CDD\|238624
NZ_CP006003.1\|WP_046718000.1\|5513291_5516039_+\|DNA-mismatch-repair-protein-MutS	unknown	unknown	gnl\|CDD\|235444
NZ_CP006003.1\|WP_046713726.1\|5524680_5525550_-\|FMN-dependent-NADH-azoreductase	unknown	unknown	gnl\|CDD\|187542
NZ_CP006003.1\|WP_046713722.1\|5516092_5516677_-\|DUF2911-domain-containing-protein	unknown	unknown	gnl\|CDD\|378565
NZ_CP006003.1\|WP_052771068.1\|5520237_5521260_+\|DUF3616-domain-containing-protein	unknown	unknown	gnl\|CDD\|372008
NZ_CP006003.1\|WP_046713718.1\|5506366_5507773_+\|glucose-dehydrogenase	unknown	unknown	gnl\|CDD\|369642
NZ_CP006003.1\|WP_046713721.1\|5510048_5511740_-\|ABC-transporter	unknown	unknown	gnl\|CDD\|223733

Protein	Function_ID	Function_description	E-value
NZ_CP006003.1\|WP_046713729.1\|5527737_5528580_+\|AraC-family-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	6.99249e-30
NZ_CP006003.1\|WP_046713728.1\|5526669_5527653_-\|Xaa-Pro-aminopeptidase-like-protein	gnl\|CDD\|223893	COG0823, TolB, Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion].	0.000633452
NZ_CP006003.1\|WP_046713732.1\|5531132_5531912_-\|polymer-forming-cytoskeletal-protein	gnl\|CDD\|377376	pfam04519, Bactofilin, Polymer-forming cytoskeletal. This is a family of bactofilins, a functionally diverse class of cytoskeletal, polymer-forming, proteins that is widely conserved among bacteria. In the example species C. crescentus, two bactofilins assemble into a membrane-associated laminar structure that shows cell-cycle-dependent polar localization and acts as a platform for the recruitment of a cell wall biosynthetic enzyme involved in polar morphogenesis. Bactofilins display distinct subcellular distributions and dynamics in different bacterial species, suggesting that they are versatile structural elements that have adopted a range of different cellular functions.	0.00171011
NZ_CP006003.1\|WP_046713717.1\|5505494_5506043_-\|glutathione-peroxidase	gnl\|CDD\|223463	COG0386, BtuE, Glutathione peroxidase [Posttranslational modification, protein turnover, chaperones].	8.03214e-79
NZ_CP006003.1\|WP_046713730.1\|5528669_5529710_+\|hypothetical-protein	gnl\|CDD\|237512	PRK13800, PRK13800, fumarate reductase/succinate dehydrogenase flavoprotein subunit.	0.00926528
NZ_CP006003.1\|WP_046713727.1\|5525707_5526667_+\|AraC-family-transcriptional-regulator	gnl\|CDD\|378976	pfam12852, Cupin_6, Cupin. This is a family of bacterial and eukaryotic proteins that belong to the Cupin superfamily. Some of the proteins in this family are annotated as being members of the AraC family of transcription factors, in which case this domain corresponds to the ligand binding domain.	4.8193e-46
NZ_CP006003.1\|WP_046713720.1\|5509479_5510022_+\|N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	3.87335e-15
NZ_CP006003.1\|WP_046718002.1\|5524195_5524675_-\|DUF1772-domain-containing-protein	gnl\|CDD\|227787	COG5500, COG5500, Predicted integral membrane protein [Function unknown].	3.44797e-45
NZ_CP006003.1\|WP_052771068.1\|5520237_5521260_+\|DUF3616-domain-containing-protein	gnl\|CDD\|372008	pfam12275, DUF3616, Protein of unknown function (DUF3616). This family of proteins is found in bacteria. Proteins in this family are typically between 335 and 392 amino acids in length. There is a conserved GLRGPV sequence motif.	2.59455e-10
NZ_CP006003.1\|WP_046713724.1\|5521566_5522331_+\|DUF3592-domain-containing-protein	gnl\|CDD\|378822	pfam12158, DUF3592, Protein of unknown function (DUF3592). This family of proteins is functionally uncharacterized.This family of proteins is found in bacteria, archaea, eukaryotes and viruses. Proteins in this family are typically between 150 and 242 amino acids in length.	1.76762e-05
NZ_CP006003.1\|WP_046717999.1\|5511766_5513122_-\|Na+/H+-antiporter-NhaA	gnl\|CDD\|377746	pfam06965, Na_H_antiport_1, Na+/H+ antiporter 1. This family contains a number of bacterial Na+/H+ antiporter 1 proteins. These are integral membrane proteins that catalyze the exchange of H+ for Na+ in a manner that is highly dependent on the pH.	2.57086e-170
NZ_CP006003.1\|WP_046713719.1\|5508076_5509453_+\|amidohydrolase-family-protein	gnl\|CDD\|238624	cd01299, Met_dep_hydrolase_A, Metallo-dependent hydrolases, subgroup A is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.	1.67956e-113
NZ_CP006003.1\|WP_046718000.1\|5513291_5516039_+\|DNA-mismatch-repair-protein-MutS	gnl\|CDD\|235444	PRK05399, PRK05399, DNA mismatch repair protein MutS; Provisional.	0
NZ_CP006003.1\|WP_046713726.1\|5524680_5525550_-\|FMN-dependent-NADH-azoreductase	gnl\|CDD\|187542	cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcriptional regulator) and triphenylmethane reductase (TMR) like proteins, subgroup 1, atypical (a) SDRs. Atypical SDRs related to NMRa, TMR, and HSCARG (an NADPH sensor). This subgroup resembles the SDRs and has a partially conserved characteristic [ST]GXXGXXG NAD-binding motif, but lacks the conserved active site residues. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	3.29461e-71
NZ_CP006003.1\|WP_046713722.1\|5516092_5516677_-\|DUF2911-domain-containing-protein	gnl\|CDD\|378565	pfam11138, DUF2911, Protein of unknown function (DUF2911). This bacterial family of proteins has no known function.	6.34801e-63
NZ_CP006003.1\|WP_046713725.1\|5522418_5524191_+\|N-acetylmuramoyl-L-alanine-amidase	gnl\|CDD\|119407	cd02696, MurNAc-LAA, N-acetylmuramoyl-L-alanine amidase or MurNAc-LAA (also known as peptidoglycan aminohydrolase, NAMLA amidase, NAMLAA, Amidase 3, and peptidoglycan amidase; EC 3.5.1.28) is an autolysin that hydrolyzes the amide bond between N-acetylmuramoyl and L-amino acids in certain cell wall glycopeptides. These proteins are Zn-dependent peptidases with highly conserved residues involved in cation co-ordination. MurNAc-LAA in this family is one of several peptidoglycan hydrolases (PGHs) found in bacterial and bacteriophage or prophage genomes that are involved in the degradation of the peptidoglycan. In Escherichia coli, there are five MurNAc-LAAs present: AmiA, AmiB, AmiC and AmiD that are periplasmic, and AmpD that is cytoplasmic. Three of these (AmiA, AmiB and AmiC) belong to this family, the other two (AmiD and AmpD) do not. E. coli AmiA, AmiB and AmiC play an important role in cleaving the septum to release daughter cells after cell division. In general, bacterial MurNAc-LAAs are members of the bacterial autolytic system and carry a signal peptide in their N-termini that allows their transport across the cytoplasmic membrane. However, the bacteriophage MurNAc-LAAs are endolysins since these phage-encoded enzymes break down bacterial peptidoglycan at the terminal stage of the phage reproduction cycle. As opposed to autolysins, almost all endolysins have no signal peptides and their translocation through the cytoplasmic membrane is thought to proceed with the help of phage-encoded holin proteins. The amidase catalytic module is fused to another functional module (cell wall binding module or CWBM) either at the N- or C-terminus, which is responsible for high affinity binding of the protein to the cell wall.	4.85093e-66
NZ_CP006003.1\|WP_046713718.1\|5506366_5507773_+\|glucose-dehydrogenase	gnl\|CDD\|369642	pfam07995, GSDH, Glucose / Sorbosone dehydrogenase. Members of this family are glucose/sorbosone dehydrogenases that possess a beta-propeller fold.	6.44752e-172
NZ_CP006003.1\|WP_046713721.1\|5510048_5511740_-\|ABC-transporter	gnl\|CDD\|223733	COG0661, AarF, Predicted unusual protein kinase [General function prediction only].	3.10062e-122

>NZ_CP006003.1|WP_052771068.1|5520237_5521260_+|DUF3616-domain-containing-protein
MRLASIILGICVTGCAARGVSSTPESAPAAGGSGRDVLVFEGMCDASGAVALGGSLFVVGDDEDNILRVYDARRGGAPVQSVDLSPDLELPAHKKKPPEADIEAATGLGTYSFWLTSHGRNSSGKKAPSRLRFFATEEVDGKPQLVGRPYTQLLDDLLAAPQLSGLRLAEAEPLAPKAEGGLNIEGMTAMADGASIYVGFRSPVPQGKALLVPVLNPVQMVLEGKSAQVGEPRLVDLGGMGIRSLSWWHGRYLIISGGTDGSGTSRLFTWSGGDDAPVLASDVDLAGFNPEAFFTPEDAEEILLLSDDGTVPVDGTACKKLKDPAKKRFRGVWVKLPAQG
>NZ_CP006003.1|WP_046713723.1|5518156_5519977_-|hypothetical-protein
MKITFDGIEYETDDTSQKDALAHAIDTCAEAWKLDQAIIALRFKSFGNETVTGTVIAYMEKRRRQLETPQVTFTQGFVFRDDRKKCTVCTAPLELETYGTGSDWFSSSDFNQFICGPCAMKQSSNIKACSKTGCGRLFWACTSQTTCADCYARSHYEGLARDQAITMSQVTLDVPQYHGGVHAEILFRNFIKAQTNLDSICVSRNNGIDLVFITNGDAEYDSLRNCMVGPSTVPVSTSRFPSRTRTQRFVPQRGRVIHCIEVKVNDAQCSKAQQNAEKFVNDRIKRALKGEYGDDALAGAGTVEAAMNKGAEFELHLIRVSMPRFGTTEYTQGAPITAVRYPWGETGRTGGIQMTLLAQCNSITYMDSAWIGDTGERIATQFLAQLGFDIRGPVQNNTGNGVDITAKLKHTPTSPRWAFFEVKASTAKFQTSLEHAEEEQWMFVMDRCSKALMHIDKYKGLGAYQGSSVHPTVRTVNDLFWDFQSPAHWETRALYFRVAVRLPDPGQNDAPQVKLLLWASPRSQGKKALVKDPIPQPLFIGYGGSSFPTPTSSVGKVSMQTFAPHPFGGRYDNVHSCFVMGCDCSQFVPTLLFPKTCVTCLHDHGS
>NZ_CP006003.1|WP_046713722.1|5516092_5516677_-|DUF2911-domain-containing-protein
MTNHRSSWHLTIPALAALFLLAATPAAAQKSIPPEKAPASPLAMTAKKLDDNTYVKVTYHSPRIQDPKTGEKRQIFGKLVPYGEVWRLGANQATELTTTGDIELAGKKLPAGTYALFTIPQADKWTLIVNKDVGQWGAYKYDKSKDVLRVDVPTKKSADTYEALTITVDEKAPALNFAWENTLVSVPLSVAKKK
>NZ_CP006003.1|WP_046718000.1|5513291_5516039_+|DNA-mismatch-repair-protein-MutS
MKAAKAAAVELPVDPTQDVAPDGEKASEGSGAREIASLTPMMRQYLEVKALHPDTVLFFRLGDFYEMFFEDAVKASEILQITLTARAKGADKVPMCGIPYHSSRRYIARLIGEGLKVAICEQVEEAGSGPGIVRREVTRVITPGMVLDEEVLEPRDSNFLAAVYWNEKGFGGALLEASTGEFLAMEAGSAAELAESLSRVEPRELLVPAGQRNSAEVAQLCSRLPRVPAVAEGEVAAFEPARAAGYLRSHFAVQSLSAFGLDDAPLATGAAGAALRYLKDTQKTPAAHVDRLSRQERSGSLLMDESSRANLEVLRSQRDGGRKGSLLGVLDRTVTSLGARKLARWLASPLGSLPEIHARLDSVEELSAKSVWREELTGILKEVADLERLTGRLSLGAGNARDLRALGVSLAQLPRLGAALARCQASLLQSLAGPLTALPELANLLARSVVDEPPVALKEGGFIRQGYHAELDRLVELSTSGKDVLLKIEAREKERTGIGSLKIRYNKVFGYYLEVTKSNLHLVPADYIRKQTTVGAERFVTPELKEHEEQVLTAEERRCALELQLFEELRAKVAQAAPRIRSAAEAVATADALLSFARCASEYGYTRPEVDASEVLSITAGRHPVVERMLGAGESFVPNDVRMDPEDAQLLVITGPNMAGKSTVMRQVALTALMAQAGSFVPAKAARIGLCDRIFTRVGAADNLARGQSTFMVEMTETSHILHHATNKSLIILDEIGRGTSTFDGLSIAWAVAEHLHDHVSARTLFATHYHELVDLARERSKVKNLCIAVKEQGGKVIFLRKLIPGGASRSYGIEVAKLAGLPSEVVGRARELLQNLESGELDDAGRPRVAVRQNPKKAAVAAGQLGLFGEPVAPAPALPASHQKALEVLKSAAINNLTPLDALNLLAKLQRELE
>NZ_CP006003.1|WP_046717999.1|5511766_5513122_-|Na+/H+-antiporter-NhaA
MESPPPSTAPRTRSPTPVPALFRAAIAPLRAFFQLQTSSGILLALSAVVAMAWANSPWAQAYEGLFDARLSIGVASTHATFTVRQLINDGLMTLFFFLVGMEVKRELSAGELRTPARAVLPLIAALGGMVVPGLLYAVINAGSAAQAGWAIPMATDIAFSIGCLSLVGSRVSHGLVVFLTALAIFDDIGGILVIALFYGTGVHGGWLVAAGAVVALLVALNRFYVRNGIPWLLAGAALWFTMHHGGIHATLAGVVIGLCIPSRPTRPGREVLDELSVYIRDCTERAEDESMRGAQLLYIEERLEELEPPLNRFEHLWKGWVAYGIVPLFALANSGISLAGMGWKDLLSPVPLGIIVGLFVGKQVGILAFTWGAVRLGVSSMPGGGSLSQLHGVAVVAGIGFTVALFVAGLAFGDQPAVLNEAKLGIVVGSLLSALVGYVLLRFVAKPAVAV
>NZ_CP006003.1|WP_046713721.1|5510048_5511740_-|ABC-transporter
MNFQDLNRVRQITVIAARHGFGEVLERAGLWRILGRQEKVEVSPEAQRASTARRFRMLLNDLGPTFVKLGQVLSTRADLLPAEFVDELALLQDNVDPIPLEQVHAQIRESLGKEARELFKHIDEAPLAAASIAQVHRAVTLEGDEVVVKVQRPGIAASIDSDLVVLRNLARLLEAVVEETGIYTPTGIVDEFDRAIHEELDFINEAANIRAFLENHRERAYMKIPRVYAALSSRTVLTLEFIRGVKISQAELSDEDRKTIANHILEASFRQLFDDGLFHGDPHPGNVLLLEGNRLALLDFGVVGRLTRPMQETLVMLCLAVALKDSDSVARILYRVGVPDARANLVGFRNDIENILGQHLPTTLGQVDTRSLLRDLLDLAVKYRIRIPKEYALLSRASVSTEGMLRSLYPEMNIVEVVLPYAKELLAGRYDPMQLQGGLMRTLLRIQSMAADLPTQLSQILLDMESGKFTVTVRADQFEKLNENLRSASVIMFMGLCACGLIVGAFISFAPKPWMYGNIPVLGALGIALAAALFGAAITWYLFGGRGLGKVRLSKYLKGPKRK
>NZ_CP006003.1|WP_046713720.1|5509479_5510022_+|N-acetyltransferase
MTTSDAPPSPPVSIRPATLADAATLTELGARTFRDTFAAENTPENVDAFLSSHYSRALQEAELRDPRNLYLLAEVDGVPAGFALLCDGAPDPSVRAERPVNLSRLYVDRAFLGAKVGAALMRRCVDEARTRKHDVLWLGVWERNTRARAFYARWGFIEVGEMRFVLGTDPQRDLVLALAL
>NZ_CP006003.1|WP_046713719.1|5508076_5509453_+|amidohydrolase-family-protein
MRSRLSHVVRCIRAGSSAVLLLLSSLASAQPPASEPPRAVLFQGVRVFDGKSKGLSGPVNVLVQGNKIARISSSPIARTGQVRVIEGKGRTLMPGLIDAHYHMMMASVPLTVALAGPEGYLTLVAAREAKATLLRGFTSVRDMAGPVFSIKRGIDDGLIEGPRIWPSGAMISQTSGHGDYRRAEALPRTAMSSLTFAERVGGAAIADGQDEVLLRVREQLMLGASQIKLAAGGGVSSDHDPLDVSQYTEAELRSAVEAAENWGTYVAVHAYTPRAIQTSIRAGVKVIDHGQLMDDATAKLMAEKGVWLSLQPFLDDEDATPFPEGSENREKQLEMTQGTDKAYALAKKYKLKTAWGTDSLFDPKVAARQGAQLVKMTRWYTPAEALRMATGTNAELLALSGKRSPYKGRLGVVEEGALADLLLVDGDPVANFELIANPEKNFLVIMKDGKIYKDLLGP
>NZ_CP006003.1|WP_046713718.1|5506366_5507773_+|glucose-dehydrogenase
MRFLSMPLIVAALLVGCSDDPDPTPTPDSGPPQQDSGTPQPDAGNPPEDAGTQEPDAGTPPEDAGTQEPDAGTPPEDAGTQEPDAGPLPSGPPVPQGPPNVPEFPPAFPGQTRAPAVQSQTQFQITEVASGIRNPWGLAFLPDQRMLVTEKPTGRLYIVTQQGVKSPAVTGLPAVDGRNQGGLLDVEVGPDYAESRLIYWTYSEPRQGGNGLAVARAKLVDGAQPAVENVQVIFRMMPTLESTLHSGGRLVFTPDGKLFVTLGERSILDGRKQARDVKSHFGKVVRINPDGSVPQDNPYVNTPEAKPEIWSVGHRNILSAALDGQNRLWIVEMGPQGGDELNRPEAGKDYGWPTIGYGEEYSGAPIHDSPVGEGMEQPVYYWDPVIAPSGMTIYSGTLFPEWRNNIFVGGLAAQSLVRLMVRNDRVIGEEHLLKGRNERIRDVVQGPEGALYLLTDATNGKVLKLTPR
>NZ_CP006003.1|WP_046713717.1|5505494_5506043_-|glutathione-peroxidase
MSNLFDIPLKSIDGAPSTLGQFKGKVLLVVNVASKCGLTPQYAGLEKLYEEKRAKGLEVLGFPANNFMGQEPGSEEEIKQFCDLNYAVKFPLFSKISVVGEDKHPLYQELTRAFPDATGEGPMRTRLKGYGIEANPIPEVQWNFEKFVIGRDGRVAARFAPDVTAEDPRLVQAIDAELAKGA
>NZ_CP006003.1|WP_046713724.1|5521566_5522331_+|DUF3592-domain-containing-protein
MQLAIPHAPRKVRLTQVPGAVGRLARDAVLGLAFVALLGAVALWAGRHFVEEQGFTSRAEEVDGTIVSTRLPPVDARVGAEATLEVLYTFQDVEHSVSNVRTYAEDAEGLGKGAMVKLLVDPAAPGQPREARFARSQALRTNLVPWGVLLGLILAGIFFTREAKRLVRSEVEPLRLGALVWLTPDGPLPEEGGEVVFPAHYFRQDVKMEVRARVRPGRAPVRNGTKVLAAVVPREPGWARVIDQDLAGVLGWLR
>NZ_CP006003.1|WP_046713725.1|5522418_5524191_+|N-acetylmuramoyl-L-alanine-amidase
MSPRLLLALLVLLLVPGTVGAAKRNEAEDAYQGARRAYYALKDDAARRKLRHHWLNVVHKFQAVAKAHPKSDRAPDALFTAGELLQELSRISFVEEDLKAAIADYDKLRTDYPKHRLADDAALALARIHVHRTDRPEDARRVLTEMLAANSKGDQTKEMKALLASLPASKATPPPARKPTPTPVPVKEDKAAAVAHVETPAEKPASALVGAIEKLAREPSPIIPRLDPTTPVGGEPSGESKGGLDAAVASALASKESQTSKPAETVKVATATKPVEPAPVVDVKTSAPVEVASTKSETPRAQEHRPEPVKVAEAPKAEQKSPVEPPKPITRPVDDEVAQARLKAVAKQSRRAELTLAEQLGLKVRRVIIDPGHGGHDTGAIGKEGTREKEVALSISLKLADLLREKGLEVVLTREDDRFIRLEDRAKFANTERGDLFISVHCNAATSRKLRGIETYTLNTSADRYSIRLAARENASSEKGISDLQFILADLATKANTEESSRLANQVQRSLVTELSRKYSDIKGLGHKEALFYVLLGVKMPAILVETAFLSNAEEEKRLASGAYQTDVAKAIAHGVEEFLGDRNRVAKVD
>NZ_CP006003.1|WP_046718002.1|5524195_5524675_-|DUF1772-domain-containing-protein
MLETLLPLLTWASLLGCGLMAGVFFAFSTFVMKGLERVPPTTGITAMQGINTAVMPSVFLGVFMATALLCAGLVVSSVFTWAQPAARLRLLGGMLYLVGCFGVTAGFNVPRNDALARLSAQSAEAPAYWARYQSEWTAWNHVRTLACLGALVSLVLSRD
>NZ_CP006003.1|WP_046713726.1|5524680_5525550_-|FMN-dependent-NADH-azoreductase
MLTVMGATGNTGKKVVELLLAAGQDVLALGRSEERLGELAAKGAKVLAGDSEDAAYLTRAFRGAQAVYTLLPTDRESASYHEAQRRKGEAIVQALRDSGVRHVVALSSLGADLAEGTGLLATLHAQEQRLRTLKDTHVLLLRPVSFFENFLDALPVIEHEGVNADSVTPDLALPMIAARDIAEVAARALVRRDWTGVVVRELLGPRDLSYREATRILGERLGRPGLDYVQLPPEGMQQALMQAGISETFAGLYVEMTRAFNEGRIQPRTGRTPDNTTPTRFEDFVATLR
>NZ_CP006003.1|WP_046713727.1|5525707_5526667_+|AraC-family-transcriptional-regulator
MAELRPPVDALGEALHFLRMSGTFYCRSELTAPWGLDLPATEGSLMFHVVTTGQCWLEVDGVEPRLLQPGTFALVPHGAGHRLVHERGGLARKLEELSEELVSERYSILRHGGGGAPTTLICGAVRLDHPAARHLMSLLPGIILVEPSNSPRMDWLQSTLRFMAAEAQELRPGGETVITRLADVLVVQALREWMAQDTQAKSGWLGALQDPDVGRALALIHREPTRPWTVASLASSVAMSRSAFSARFTQRVGEPPMHYLARWRMYVAHSALKDERPGLGELATRMGYQSEAAFSRAFKRFMGVSPGAVRKTGSPTLRA
>NZ_CP006003.1|WP_046713728.1|5526669_5527653_-|Xaa-Pro-aminopeptidase-like-protein
MAGSMRGVLMTLGLLGLGCGAHQGGERVTAAKRADGCTPELYGAGLFTTGAWDFFMAFSPDQRRVLFGRADDAFERFTMYETRLDAQGRWSRPELPRFAREWSNADPHLSPDGRTVFFISDRPEPGEPGPRASYDIWSASLGADGEWEDARRLPAPVNDKSRDEWSPAVAANGNLYFGGDFQGTHGGSDLWVSRQVDGVYQPPENLGAAINSSLHELEPWIAPDESYLLFSALRRPDGLGRYDLFLSRKVDGRWEPARRLCEGINTRDSEYNHSVSPDGKWLYFSSTRPFSGDVGERFDTPRDDASLQGIGNGTGDMYRIPMSAIGL
>NZ_CP006003.1|WP_046713729.1|5527737_5528580_+|AraC-family-transcriptional-regulator
MLPERAPGYHVLGEGDAFDVSDCVCRAGCNSPVVEGAHARVCVSVVLSGAFHARGPEGDAVVGPGALLLGNRAAPYEFRHVDDGGDRSLVIECSDAMLDEALLGSRGADMRPFERTSVPASLASLEAVLLARQALQPGDAETLREVVLSVVDVALRLGGERADTRVELSERQARGVARVLRYLEDHVAEDCSLEMLASIAGLTRFRFLRVFRVVTGQTPRQWVIAMRLRLAANLLRASRTRVTDIALESGFGDLSHFTMSFTRAFGISPRAYRMRARERG
>NZ_CP006003.1|WP_046713730.1|5528669_5529710_+|hypothetical-protein
MDESVSRLSSSDPRGVSEALETLGDALCAEDHQVRERVARLLLKELERPEATKAYAPILHLLQTTWWPPPVSLTQPAMVAVLSAVSRLDAEAPALDDAALLVANLYRMAPLPLSALEQALGHEQASVRRVAAGVVGRVGESAVSLLPRLLTALEDVEPVAGAALESLGSLAPAAPRLAVPALVDQVGRAEGTRQYLALMSLRSLLEDDRREGQAAPELAALEPVLLKSAEDSQAPIRLESVSLLGLGRLSSLATVATLRRHLLDESPRVAASAAVALLRVGAPPQEAATLLSTLLTSEDSEKDMAALTALEGVESATLGRIRDSLEQAANKAKGLVAEAIRELLLA
>NZ_CP006003.1|WP_046713731.1|5529821_5531084_+|hypothetical-protein
MVVGTNVMRQQAILRVVLGSASLCLGGFGGAAWAGGPTSEPASSTSAARPRTLDDALLEVERSAPGFAGMYHDEKGRLVVRLVNATAAPAARSAITSVFGADKIPAAGVVTEPATRTFSQLKAIQERLTPEVLALPGAVFTDVDEKSNRVAIGVERAESRARVEWTLGRLAVDRDAVDVVEVGPIRPASVQSGWTPVAGGLQIETPGKYCTLGFAALQGGTLGFVTNSHCTTVQGGVESTLAYQAVYPWQVGTETTDPFYATGGSCPAGRRCRYSDSAFFRADAAISSRVVQTPGAFNLTISAWHEVTGKVLYPSQGQTVFKTGRTSGTTSGTIEWACATVNGGGVPDTFYCNYIATSGAQNGAGGDSGSPVYIFTANGVALTGLMWGAGSNPWNFAFAPLGGVEFELGIVPYCWGNVGC
>NZ_CP006003.1|WP_046713732.1|5531132_5531912_-|polymer-forming-cytoskeletal-protein
MPTTKKQSPSKMQRLSDGSLSPEGVPALLKRTVRGRFAQSSTLRAARRFVEERLEGGRKDSDIVHHEGRLVLEELTTGKRPRLGLLIVEGDLHVKGRYEDSLDPESVVIVTGTLRAGDVITRGFLEVQGELLAERSILFLDNDACCEVFGDVRAPFVYTSSHAVKVHGGVEARLVTGDGKYIRSARKHTFIEETEREVRDLLSPKLLKRFADEMFEDEEGEEVDPDEPWIDAIDTEKLAAYVRRGQPVLAEAPPSRRRK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP006003_20

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP006003_20

6327769-6327871

Unclear

Consensus_repeat	Method
GATGCCTCACCGCGAGGCTCCGACG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP006003_20

>merge|NZ_CP006003|20|6327769-6327871|CRISPRCasFinder
GATGCCTCACCGCGAGGCTCCGACGCCGCCATCCCTCGCGGAGAGCTCGAATCTCCCGAAGGAGCAAGCCGCGCTCCCGACGCCTCACCGCGAGGCTCCGACG

>NZ_CP006003|20|18|6327769-6327871|CRISPRCasFinder
GATGCCTCACCGCGAGGCTCCGACG	CCGCCATCCCTCGCGGAGAGCTCGAATCTCCCGAAGGAGCAAGCCGCGCTCCC
GACGCCTCACCGCGAGGCTCCGACG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP006003.1\|WP_046714176.1\|6333297_6335532_+\|aspartate-ammonia-lyase	unknown	unknown	gnl\|CDD\|379285
NZ_CP006003.1\|WP_046714160.1\|6317641_6318229_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046714162.1\|6318891_6319245_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046714163.1\|6320605_6321943_-\|threonine-synthase	unknown	unknown	gnl\|CDD\|178182
NZ_CP006003.1\|WP_046714166.1\|6323374_6324334_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046714177.1\|6335531_6337094_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379285
NZ_CP006003.1\|WP_046714167.1\|6324347_6325091_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP006003.1\|WP_046714165.1\|6322608_6323250_-\|protein-L-isoaspartate(D-aspartate)-O-methyltransferase	unknown	unknown	gnl\|CDD\|178974
NZ_CP006003.1\|WP_046714159.1\|6316750_6317488_-\|competence/damage-inducible-protein-A	unknown	unknown	gnl\|CDD\|238450
NZ_CP006003.1\|WP_046714161.1\|6318238_6318895_-\|dTMP-kinase	unknown	unknown	gnl\|CDD\|223203
NZ_CP006003.1\|WP_046714172.1\|6330256_6330802_+\|D-alanyl-D-alanine-carboxypeptidase	unknown	unknown	gnl\|CDD\|350615
NZ_CP006003.1\|WP_046714178.1\|6337103_6337820_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046714175.1\|6332713_6333199_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046714174.1\|6331883_6332717_+\|DUF692-domain-containing-protein	unknown	unknown	gnl\|CDD\|377459
NZ_CP006003.1\|WP_046714164.1\|6321939_6322506_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046714170.1\|6329178_6329709_+\|FHA-domain-containing-protein	unknown	unknown	gnl\|CDD\|366133
NZ_CP006003.1\|WP_046714173.1\|6330984_6331881_+\|TIGR04222-domain-containing-membrane-protein	unknown	unknown	gnl\|CDD\|275063
NZ_CP006003.1\|WP_052771463.1\|6319444_6320596_+\|3,4-dihydroxy-2-butanone-4-phosphate-synthase	unknown	unknown	gnl\|CDD\|181774
NZ_CP006003.1\|WP_046714171.1\|6329752_6330157_+\|6-O-methylguanine-DNA-methyltransferase	unknown	unknown	gnl\|CDD\|226219
NZ_CP006003.1\|WP_046714169.1\|6328474_6328993_-\|transcription-elongation-factor-GreA	unknown	unknown	gnl\|CDD\|234693

Protein	Function_ID	Function_description	E-value
NZ_CP006003.1\|WP_046714159.1\|6316750_6317488_-\|competence/damage-inducible-protein-A	gnl\|CDD\|238450	cd00885, cinA, Competence-damaged protein. CinA is the first gene in the competence- inducible (cin) operon and is thought to be specifically required at some stage in the process of transformation. This domain is closely related to a domain, found in a variety of proteins involved in biosynthesis of molybdopterin cofactor, where the domain is presumed to bind molybdopterin.	9.21684e-47
NZ_CP006003.1\|WP_046714163.1\|6320605_6321943_-\|threonine-synthase	gnl\|CDD\|178182	PLN02569, PLN02569, threonine synthase.	0
NZ_CP006003.1\|WP_046714177.1\|6335531_6337094_+\|hypothetical-protein	gnl\|CDD\|379285	pfam13598, DUF4139, Domain of unknown function (DUF4139). This family is usually found at the C-terminus of proteins.	2.73665e-68
NZ_CP006003.1\|WP_046714167.1\|6324347_6325091_+\|hypothetical-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	4.68746e-06
NZ_CP006003.1\|WP_046714165.1\|6322608_6323250_-\|protein-L-isoaspartate(D-aspartate)-O-methyltransferase	gnl\|CDD\|178974	PRK00312, pcm, protein-L-isoaspartate(D-aspartate) O-methyltransferase.	7.57774e-82
NZ_CP006003.1\|WP_046714170.1\|6329178_6329709_+\|FHA-domain-containing-protein	gnl\|CDD\|366133	pfam00498, FHA, FHA domain. The FHA (Forkhead-associated) domain is a phosphopeptide binding motif.	9.90436e-22
NZ_CP006003.1\|WP_046714161.1\|6318238_6318895_-\|dTMP-kinase	gnl\|CDD\|223203	COG0125, Tmk, Thymidylate kinase [Nucleotide transport and metabolism].	2.78936e-62
NZ_CP006003.1\|WP_046714172.1\|6330256_6330802_+\|D-alanyl-D-alanine-carboxypeptidase	gnl\|CDD\|350615	cd14814, Peptidase_M15, Metalloproteases including zinc D-Ala-D-Ala carboxypeptidase, L-Ala-D-Glu peptidase, L,D-carboxypeptidase, bacteriophage endolysins, and related proteins. This family summarizes zinc-binding metallopeptidases which are mostly carboxypeptidases and dipeptidases, and includes zinc-dependent D-Ala-D-Ala carboxypeptidases, VanX, L-Ala-D-Glu peptidase, L,D-carboxypeptidase and bacteriophage endolysins, amongst other family members. These peptidases belong to MEROPS family M15 which are involved in bacterial cell wall biosynthesis and metabolism.	1.77317e-30
NZ_CP006003.1\|WP_046714174.1\|6331883_6332717_+\|DUF692-domain-containing-protein	gnl\|CDD\|377459	pfam05114, DUF692, Protein of unknown function (DUF692). This family consists of several uncharacterized bacterial proteins.	5.78266e-98
NZ_CP006003.1\|WP_046714169.1\|6328474_6328993_-\|transcription-elongation-factor-GreA	gnl\|CDD\|234693	PRK00226, greA, transcription elongation factor GreA; Reviewed.	2.74722e-73
NZ_CP006003.1\|WP_046714173.1\|6330984_6331881_+\|TIGR04222-domain-containing-membrane-protein	gnl\|CDD\|275063	TIGR04222, integral_membrane_protein, TIGR04222 domain. The majority of the proteins with a domain as described by this model have an extreme C-terminal sequence that is consists of extremely low-complexity sequence, rich in Ser or in Gly interspersed with Cys. That C-terminal region resembles ribosomal natural product precursors, although there is no evidence that C-terminal regions of these proteins undergo any modification or have any such function.	3.12032e-36
NZ_CP006003.1\|WP_052771463.1\|6319444_6320596_+\|3,4-dihydroxy-2-butanone-4-phosphate-synthase	gnl\|CDD\|181774	PRK09311, PRK09311, bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II.	1.88619e-171
NZ_CP006003.1\|WP_046714171.1\|6329752_6330157_+\|6-O-methylguanine-DNA-methyltransferase	gnl\|CDD\|226219	COG3695, COG3695, Predicted methylated DNA-protein cysteine methyltransferase [DNA replication, recombination, and repair].	9.11984e-25
NZ_CP006003.1\|WP_046714176.1\|6333297_6335532_+\|aspartate-ammonia-lyase	gnl\|CDD\|379285	pfam13598, DUF4139, Domain of unknown function (DUF4139). This family is usually found at the C-terminus of proteins.	2.59577e-26

>NZ_CP006003.1|WP_046714167.1|6324347_6325091_+|hypothetical-protein
MLTPLLLLLTAAPPDAATLRAQAQKAYDAKQFAKACPLFEKLTKLSPQDGAAWSDLSLCLFRAKKKPAALDAARHAVRWGDEKTRKNTYFNVDKFGGGEDGVFTRDGDDAPCKKAQLPECAQTAWLCPDSYADLYRTSGSTSGGSYSAEYLCSMSQGSEPQGCTLIDLGFTQDTFAGDSDDSPGIYSFKSCGIVAVDPCARRLGLTCSEGEGVLGGETGRKTTNERKWVEERDYEPLPKPASPDAGP
>NZ_CP006003.1|WP_046714166.1|6323374_6324334_+|hypothetical-protein
MAEPAFIFGRVESPGAIQPPPTRLPFVQGIIPLLLALVGGYQLLGLRTDTPEPPGLQGALLAGTLVCGVWGAVRMRRSLRLRAFAREHRTEPWLWDHPWTQETVAPQLATGPLLWPILGGLVIVGLLGAFGYLAPEVLRPDAREQERLGGGFMLLALTTSGLYVTWRFLLRAFYRRWKARRVFGRVSLRLPKVPLSLGGKDTVELLPEHDVPSLHSLTVTLRRIHQVTRTKGTGNSQRRITTRTLQHEHTQELDFEGLRADRPLKIPLTFLITDARSSTWRQLGEEVSWELEVWGSTEEEKTLAMNFRLPVYVTAATRL
>NZ_CP006003.1|WP_046714165.1|6322608_6323250_-|protein-L-isoaspartate(D-aspartate)-O-methyltransferase
MGDLERAEYLSGQGIHDPRVLEGIGRLSRAEFVAEHSRSEAGVDAPLPIGHGQTISQPYVVAFMTQALRLEGHERVLEIGTGSGYQTALLSLLCREVFTVEIIPELARSARERLHRLGFENVYFRQGDGAEGWPEQAPFDAIMVTAAPVEVPAALLSQLRRGGRMVVPVGPLEGAQQLLLIHRAKEVGHLPRVESLLPVRFVPLTGPSGLPQP
>NZ_CP006003.1|WP_046714164.1|6321939_6322506_-|hypothetical-protein
MIICPVCDHVQPEGTECDVCGKRFPVAAAGATPPVAPLPELELTPHAGGRDAVNAQPLPELDITRLRSGPDLPPQVVQDLELTRSAPTGDLPVAVLPELDTGRAPDDGVRTAAPLGAVTCRYCRNVQAQGLLCDNCGMRLPRARVAPAVVAGKPGADDDNWMACPSCHTRGRPGRACSECGTRLQEKT
>NZ_CP006003.1|WP_046714163.1|6320605_6321943_-|threonine-synthase
MSAPESGFKAEYACSEGCDFRASLLDVVYRCPRCEGLLEVRHDVAALRSVPAAEWKRRFESRFGSSRLPDGSGVWGKREWAFPQLPVEDIVSLGEGRVPLKPLPRMASELGLSALELKECGVSPTGSFKDWGMTVLVSAVKHMRARGVPLRAVACASTGDTSAALSAYCAAAGIPAVVFLPRDKVSLAQLVQPIANGARVLSLDTDFDGCMRLVQAVTADTGLYLANSMNSLRIEGQKMVAVELCQDLGWEPPDWVVIPGGNLGNASALGKGFELMLELGLITRRPRIAVAQAQRANPLARAFRGGFQELQPMQAESTLASAIQIGNPVSFRRAVRILKAFDGVVEEATESELANAAARADREGTFTCPQTGVALAALEKLVAQGVIAKGSRVAVVSTAHGLKFADFKVGYHRGTLADVTSRHANPPVQLPANLDAVRAALSDLG
>NZ_CP006003.1|WP_052771463.1|6319444_6320596_+|3,4-dihydroxy-2-butanone-4-phosphate-synthase
MQTRERTEATMSHDAKLSSIEDAIQDIRDGKFVIVADDEDRENEGDLIMAAEKVTPEHLAFMVRHTSGIVCMPMLADRLDALRLPQMVSDNTESHRTAFTVSVDYRHGTTTGVSAADRAKTILALADPESQANDFLRPGHIFPLRYREGGVLRRAGHTEATVDLSRLAGLGPSGILCELVKDDGTMMRMPDLQAFALEHKLRVITIADLIEYRRRKDRLVRREPGQHTVTTRYGDFTALTYTWLPDGAKSLVLVKGDPASRPSALVRLHAACTLGDVFGSPTCNCNALLDQSLARIAREGSGVLVYLPGMHGDDFGIHHKRNPDGSADLRRGPQETRDLGMGCQILNDLNVRTLQVMTNTDITYRGLAGFGLTIDKRVPLLAD
>NZ_CP006003.1|WP_046714162.1|6318891_6319245_-|hypothetical-protein
MSGSEMSANTQDLRTRLDQLQESLSVRQSTTHFAHTGVATMVALMFGGAAGKLFYDSLRTPLLAWGVALLAVVLLGYAFRRYVLGRRVLADELQRYQTMLELRSQLRLDEPSALLPQ
>NZ_CP006003.1|WP_046714161.1|6318238_6318895_-|dTMP-kinase
MSGARKVSRRGRFIVLEGLDGAGTTTQAERLAAALRAEGHGVLTTREPSEGPVGTLIRQALTGRLGLPQGAGPLTPQTLALLFAADRTDHLAARVLPALEEGKLVLCDRYVLSSLAYQGASLPMGWVEQVNDYAVSPDLTLFVGVAPEVAAKRRAARGGAAELFEADEAQRRIAKQYLAAIRRRAKKERIVHIDGEQGIEAVTQASLVQIRKLLGRKR
>NZ_CP006003.1|WP_046714160.1|6317641_6318229_+|hypothetical-protein
MTSNPIRPLRRLSSAPVALLLLLAACGAEDGTLRVIRDGKWKDFDHQRRSELSADEETRLVLCGSDTGRNVAEDVGRSACIHVVMDKALLGTGPRTLELAGTSYVKKTETFRSYTFKPRVENSPEMKAAWVQTSCFEPPDPVSLDVMQVVNGRLVLEENSATHLRGRMRLKMEGVTYGPCYGGGAEAELDFDASL
>NZ_CP006003.1|WP_046714159.1|6316750_6317488_-|competence/damage-inducible-protein-A
MERTGAAAIIIGNEVLTAKVQDQNGPHLIKRLREVGIPLRSVETILDDVDAIVDAMNRARQRARYVFTSGGIGPTHDDVTVRAVAMALGKSVVRLPEMVSLIEARAPEGKVTPEGMRLADAPEGAVLLPQAGTWYPVLTVGDVYLLPGVPQLFRMQLETVLARLSGSPVVLQNLFLRLGESEIAAVLDHVALDMPHVAIGSYPEFDPAKDYRVKITVEAGERGPVEEAVARIIGGLPDGAVLRRE
>NZ_CP006003.1|WP_046714169.1|6328474_6328993_-|transcription-elongation-factor-GreA
MASGSDNIPMTPSGLRKLKSELKHLQSVERGKISREIEVARAHGDLRENAEYHAAKEKQSHIEGRILTLNDWIARAEVIDISKLGGDRVVFGATVDLLDTETEKPVTYRIVGEMEADLKKRWLAVTAPVAQALIGKRVGDIATVQSPGGTRELEIQKIRFEDPQDEAPAGEG
>NZ_CP006003.1|WP_046714170.1|6329178_6329709_+|FHA-domain-containing-protein
MLSVQELRALAASLPARDFERQLGPFALIQRPPSEASAAVLAPTRMAAPEDISLGMMTLLFEFEHLRVATLPPLHATDRLRIGRRMDCDVVIDDASVSKLHAELRWNESQNRCTVQDLGSTNGTFLNAGTLGLREATLRDGDILSFGNVQFWYLEARTLHERLKAGEATGLGSRSG
>NZ_CP006003.1|WP_046714171.1|6329752_6330157_+|6-O-methylguanine-DNA-methyltransferase
MTQPARDERDYFERIYTVVEAVPSGKVATYGDIATIVGDGCDARVVGHALGALGARSATVPWQRIINRTGGISLTGHGQKELLEAEGVGFDERGQARMDLHHWSGPSEDWARARGFQPLPAPTPKPAAAQLSLF
>NZ_CP006003.1|WP_046714172.1|6330256_6330802_+|D-alanyl-D-alanine-carboxypeptidase
MSLALFRWSAVLLACLFTTAVLAAEARPRRKTKAAKLVHIDGGHRLHRDAASALQRMTLDAAKHDVALRVTSGYRSLPEQRVLYEQYRRGRGNKAARPGRSNHQRGLAVDLVIGKRTSKRYQWLEANACRFGFRRTVPSEPWHWEYRPSSTFPPVVGHDCTGKEVKRPKPTPEPVARQDAS
>NZ_CP006003.1|WP_046714173.1|6330984_6331881_+|TIGR04222-domain-containing-membrane-protein
MDPLNLSGPDFLALYVLSAMSALALGLFLRWTLRTPGGSPDVLPQKLDPYELAMLSGPKAVAHTALARLLHEKALVMDGTNLTTTGKRSDFASPFERLVYAAVHESKKSNAELVASIEPALERLKHPLQQRGWLVDEGQATRARWLPMLPLLGVLLLGLAKINVGLERERPVAFLGFLCFVTVVTLFFLTRPVWTSRRGSALLHALRWNQQPLKTSIMSTENSQVMNSQDLGVAVALFGLGAVAMTDFELMRRHIDPSGSSFGGVSGSSGCSGSSSSCSSGGDGGGGGGCGGCGGGGD
>NZ_CP006003.1|WP_046714174.1|6331883_6332717_+|DUF692-domain-containing-protein
MPGLRGVGIGWRRELALFIDRRPGLGFVEVLAEHLSPKGPIPEPLLRLRERGVPVVLHAVSLGLGSAEPPDPRRLEWLAGLAERLGAVCVSEHLAFVRAGGLESGHLLPVQRSEEALEVLTENIRMAEAALPVPLALENVASLFEWPDAAFTEADLLRGVLERTGASLLLDVANLHAHVLNHGTDADAVLAAVPRERLAYVHVAGGVQRGGLYHDTHAHPLPSGPLALLERLAARLGPVPVMLERDDRFPPEAELTAELSAMEQALLRGTERHEGMA
>NZ_CP006003.1|WP_046714175.1|6332713_6333199_+|hypothetical-protein
MSARERQARAQAELVRALGVGAPVPPGFDEARVLAAARSLMNKRRRGVERAWPLLASALGPDFAPRFEQWARSNPMSVEPDSRVEGRRFAQALRDEGRLPGTLSRELLDFDASWRVTPSGELVRRWGIVLVGQRHDTTRRRQWALRLPGGRVLRWSPEPHP
>NZ_CP006003.1|WP_046714176.1|6333297_6335532_+|aspartate-ammonia-lyase
MLVVPSMLDAVTVHAEGALCTRIATLQLVEDRVPNEIQLNGLPLSLRTGTLRAAVRQGPPGLTIRAIRPTFDVQLPPEVDVPQEHRALEEALSRVSEVTARLEVTRRELQSVGKLKPTFPPQKKARYTPHQTPLASLMALTSFVDTELATLNARLLDLERELRDAENDVRLRRQRLHEASSSVRGERARVYRAAVLTLSGAPWSRETPALIALEYAVPGALWVPTYDLRLPRTLEEGTLRMRATVSQNTGEDWTGVKLSVSTAALDRRAEVPELKALRIGRRQPPPPRSGWREPPPGLDELFAGYDARRAPALTKPRPPPMEPPPPPPAPAPYRADDEITGSGMERLRSVPGSAVRSAPSSAPKAKRLMAPSAPPPRPSAAPQQEGARSRSRGSFARNQAPTEEEVLAEAPGDDDDMPMASLDLADVDGAMGGGGASVDRLSAAPRLEPSDSLLDYDRLTLAAADDLEGRGRLRSRPTHVTRELIALQALQIQVNVLSFIAVSEQQVASLRHLPLPTWSVPPRESAMHFDAKFDLESRVDVPSDSAWHTLPVLSVPVGLSAEYVIVPSVEPKAFRTVRVENRTPYPLLAGPVDVTLGDEFLMTSPLPTMPPGATQRLGLGVEESIKVARNTRFDEATGGIFGGATMLTHHVSVELANRLSNRILVEVCERVPAVPTGYEKDIKVDETETAPPWQKRTPLPGETPVEGERAWRVVLQPGEAQTLKATWTVKIPASKMLGGGNRRT
>NZ_CP006003.1|WP_046714177.1|6335531_6337094_+|hypothetical-protein
MSTPLTLPVVKVTVLEDRALVERRGEVPLVPGAQRLVIAGLSPLAVDRSLQAKLAGGTVSQARVRRVTRAQPPEALREHATELSRRVADLERLERQARADRERLNTRHGLLTAAHADVYRAISEQSGGGVAQPDTWKQQLDSVREALEAVDSARRLAAVEEQRLQQQLAQARGALSNTQKPETKLDVHAELEVGHPAGGTALLSITYLVPCAAWRPAYRATLEPAQGTQGPTVRLECEAVVWQRTEEEWKDVELALSTARPTLGAAPPRLETDWLFLRDKTEREKQVVDVSVREEVIQNTGEGAGARRDEGLPGMDDGGEALSLTAPHRANIPADGEPHRIPLFQFTAPAASELVVCPELSPLVHRVARFDNVGPSVLLAGPVDLVRTSGYVGRSQLRFTGKGERVRLGFGSEDSLRVARMTDIQEETSRLTGRKQKTHHVKMFLSNMSAQPAAVALEERIPVSEVESVEVTLQKDTTRPAPTKVSAEGIARFELTAPPRSQQELTLVYTVSSAAKVAGL
>NZ_CP006003.1|WP_046714178.1|6337103_6337820_+|hypothetical-protein
MRTSLYALGLLMAWGPVSPAFADTPPPPPAPEQERRIPQVAVDVGGGWGRMQHPTTDIPGLRNEVRTVGARANAVRLAGGIHFNMVRGSGRTDWWWTNGVDWYLLGDDVQVLALRPGLEKRLSLTDSLSLGVSLFGAASEVSLATGRISANIPGTGGGDPVIDGRYFQARSRKWIFGGGAGAALQYQLNRWFHTRMQVGYTQFVSQAKNFQVSPVKGPDSFSVSLSGPWAAAYVGVGL

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP006003_21

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP006003_21

6367623-6367719

Orphan

Consensus_repeat	Method
CGGGCCTCATCGTGGGCGCCGTCGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP006003_21

>merge|NZ_CP006003|21|6367623-6367719|CRISPRCasFinder
CGGGCCTCATCGTGGGCGCCGTCGAACTCCTGCTCGAGCACCCGGAGCAACTCCAGGCCCTTCGCGACGACCCGGGCCTCATCGCGGGCGCCGTCGA

>NZ_CP006003|21|19|6367623-6367719|CRISPRCasFinder
CGGGCCTCATCGTGGGCGCCGTCGA	ACTCCTGCTCGAGCACCCGGAGCAACTCCAGGCCCTTCGCGACGACC
CGGGCCTCATCGCGGGCGCCGTCGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP006003.1\|WP_046718086.1\|6366329_6366812_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_082165266.1\|6376588_6378157_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238362
NZ_CP006003.1\|WP_052771109.1\|6361390_6362803_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238020
NZ_CP006003.1\|WP_046714202.1\|6370477_6371875_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225405
NZ_CP006003.1\|WP_046714196.1\|6357795_6359244_-\|FAD-dependent-monooxygenase	unknown	unknown	gnl\|CDD\|223727
NZ_CP006003.1\|WP_082165265.1\|6372652_6376333_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|369473
NZ_CP006003.1\|WP_046714197.1\|6359461_6360211_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|370549
NZ_CP006003.1\|WP_046714201.1\|6368164_6368899_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_082165264.1\|6372072_6372468_+\|PKD-domain-containing-protein	unknown	unknown	gnl\|CDD\|366314
NZ_CP006003.1\|WP_046718085.1\|6363448_6365239_+\|DUF946-domain-containing-protein	unknown	unknown	gnl\|CDD\|368746
NZ_CP006003.1\|WP_046714209.1\|6380378_6381851_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046714195.1\|6357059_6357698_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
NZ_CP006003.1\|WP_046714194.1\|6356098_6357016_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NZ_CP006003.1\|WP_082165263.1\|6365269_6365998_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|273706
NZ_CP006003.1\|WP_052771110.1\|6369329_6370424_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|367555
NZ_CP006003.1\|WP_046714198.1\|6360352_6360943_-\|DUF2380-domain-containing-protein	unknown	unknown	gnl\|CDD\|370548
NZ_CP006003.1\|WP_046714210.1\|6381892_6382795_-\|TIGR02996-domain-containing-protein	unknown	unknown	gnl\|CDD\|274381
NZ_CP006003.1\|WP_046718084.1\|6362857_6363259_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046714208.1\|6379037_6380267_-\|cytochrome-P450	unknown	unknown	gnl\|CDD\|225035
NZ_CP006003.1\|WP_046714207.1\|6378158_6379028_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP006003.1\|WP_082165266.1\|6376588_6378157_+\|hypothetical-protein	gnl\|CDD\|238362	cd00688, ISOPREN_C2_like, This group contains class II terpene cyclases, protein prenyltransferases beta subunit, two broadly specific proteinase inhibitors alpha2-macroglobulin (alpha (2)-M) and pregnancy zone protein (PZP) and, the C3 C4 and C5 components of vertebrate complement. Class II terpene cyclases include squalene cyclase (SQCY) and 2,3-oxidosqualene cyclase (OSQCY), these integral membrane proteins catalyze a cationic cyclization cascade converting linear triterpenes to fused ring compounds. The protein prenyltransferases include protein farnesyltransferase (FTase) and geranylgeranyltransferase types I and II (GGTase-I and GGTase-II) which catalyze the carboxyl-terminal lipidation of Ras, Rab, and several other cellular signal transduction proteins, facilitating membrane associations and specific protein-protein interactions. Alpha (2)-M is a major carrier protein in serum and involved in the immobilization and entrapment of proteases. PZP is a pregnancy associated protein. Alpha (2)-M and PZP are known to bind to and, may modulate, the activity of placental protein-14 in T-cell growth and cytokine production thereby protecting the allogeneic fetus from attack by the maternal immune system.	9.57346e-29
NZ_CP006003.1\|WP_046714208.1\|6379037_6380267_-\|cytochrome-P450	gnl\|CDD\|225035	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism].	3.56968e-83
NZ_CP006003.1\|WP_052771109.1\|6361390_6362803_+\|hypothetical-protein	gnl\|CDD\|238020	cd00063, FN3, Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.	1.73944e-05
NZ_CP006003.1\|WP_046714202.1\|6370477_6371875_+\|hypothetical-protein	gnl\|CDD\|225405	COG2849, COG2849, Uncharacterized protein conserved in bacteria [Function unknown].	5.90052e-09
NZ_CP006003.1\|WP_046714196.1\|6357795_6359244_-\|FAD-dependent-monooxygenase	gnl\|CDD\|223727	COG0654, UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion].	1.88466e-15
NZ_CP006003.1\|WP_082165265.1\|6372652_6376333_+\|hypothetical-protein	gnl\|CDD\|369473	pfam07705, CARDB, CARDB. Cell adhesion related domain found in bacteria.	3.61071e-12
NZ_CP006003.1\|WP_046714197.1\|6359461_6360211_-\|hypothetical-protein	gnl\|CDD\|370549	pfam09535, Gmx_para_CXXCG, Protein of unknown function (Gmx_para_CXXCG). This entry consists of at least 10 paralogous proteins from Myxococcus xanthus and that lack detectable sequence similarity to any other protein family. An imperfectly conserved CXXCG motif, a probable binding site, appears twice in the multiple sequence alignment.	1.62113e-57
NZ_CP006003.1\|WP_082165264.1\|6372072_6372468_+\|PKD-domain-containing-protein	gnl\|CDD\|366314	pfam00801, PKD, PKD domain. This domain was first identified in the Polycystic kidney disease protein PKD1. This domain has been predicted to contain an Ig-like fold.	1.51064e-05
NZ_CP006003.1\|WP_046718085.1\|6363448_6365239_+\|DUF946-domain-containing-protein	gnl\|CDD\|368746	pfam06101, Vps62, Vacuolar protein sorting-associated protein 62. Vps62 is a vacuolar protein sorting (VPS) protein required for cytoplasm to vacuole targeting of proteins.	1.53275e-25
NZ_CP006003.1\|WP_046714195.1\|6357059_6357698_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	8.69751e-24
NZ_CP006003.1\|WP_046714194.1\|6356098_6357016_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	2.12506e-32
NZ_CP006003.1\|WP_082165263.1\|6365269_6365998_-\|hypothetical-protein	gnl\|CDD\|273706	TIGR01586, Cysteine_protease_avirulence_protein_AvrPphB, cysteine protease domain, YopT-type. The model represents a cysteine protease domain found in proteins of bacteria that include plant pathogens (Pseudomonas syringae), root nodule bacteria, and intracellular pathogens (e.g. Yersinia pestis, Haemophilus ducreyi, Pasteurella multocida, Chlamydia trachomatis) of animal hosts. The domain features a catalytic triad of Cys, His, and Asp. Sequences can be extremely divergent outside of a few well-conserved motifs, and additional members may exist that are detected by this model. YopT, a virulence effector protein of Yersinia pestis, cleaves and releases host cell Rho GTPases from the membrane, thereby disrupting the actin cytoskeleton. Members of the family from pathogenic bacteria are likely to be pathogenesis factors. [Cellular processes, Pathogenesis].	0.000720469
NZ_CP006003.1\|WP_052771110.1\|6369329_6370424_-\|hypothetical-protein	gnl\|CDD\|367555	pfam03544, TonB_C, Gram-negative bacterial TonB protein C-terminal. The TonB_C domain is the well-characterized C-terminal region of the TonB receptor molecule. This protein is bound to an inner membrane-bound protein ExbB via a globular domain and has a flexible middle region that is likely to help in positioning the C-terminal domain into the iron-transporter barrel in the outer membrane. TonB_C interacts with the N-terminal TonB box of the outer membrane transporter that binds the Fe3+-siderophore complex. The barrel of the transporter, consisting of 22 beta-sheets and an inside plug, binds the iron complex in the barrel entrance.	7.79824e-05
NZ_CP006003.1\|WP_046714198.1\|6360352_6360943_-\|DUF2380-domain-containing-protein	gnl\|CDD\|370548	pfam09533, DUF2380, Predicted lipoprotein of unknown function (DUF2380). This family consists of at least 9 paralogs in Myxococcus xanthus, a member of the Deltaproteobacteria. One appears truncated toward the N-terminus; the others are predicted lipoproteins. The function is unknown.	1.05366e-33
NZ_CP006003.1\|WP_046714210.1\|6381892_6382795_-\|TIGR02996-domain-containing-protein	gnl\|CDD\|274381	TIGR02996, rpt_mate_G_obs, repeat-companion domain TIGR02996. This model describes an abundant paralogous domain of Gemmata obscuriglobus UQM 2246, a member of the Planctomycetes. The domain also occurs, although rarely, in Myxococcus xanthus DK 1622 and related species. Most member proteins have extensive repeats similar to the leucine-rich repeat, or another repeat class or region of low-complexity sequence. This domain is not repeated, and in Gemmata is usually found at the protein N-terminus.	7.84584e-05

>NZ_CP006003.1|WP_046718086.1|6366329_6366812_+|hypothetical-protein
MSEERTPAEPEVMEPTFWRKNGWSARVIKNEEDDGWAVEISKQGIAEPVLISPWVMGRDKKNPKPFDAPAFATFVKTASEVLDRSARQRDQAMTRKLSIAWEGRWYEVRLELVADEYDPHALLSAIDDSGATVAKHRVSTNFKFNRDTANAWVRGGFSEP
>NZ_CP006003.1|WP_082165263.1|6365269_6365998_-|hypothetical-protein
MTRILTEFSQKRVARSKGLADQGYCLALSARWVRHIIDSEKDGWDVPKQSVHKRLQLLKDETVSLYALHQSYLSRQGKVLDMIDAQSALLTVAKSGLMEDRDHLANYLRANQPSLERIARVNVGGIQLQKSALLLMGTLRVPPKGVTNVSVTSMQEAIVIASELIRKGSTYVISNRHGSTSDEHAMALYRTGGVFSTCFYFFDPNVGEVFASSEDEAAFVINELMGPKCDSKTTEWNLLRCN
>NZ_CP006003.1|WP_046718085.1|6363448_6365239_+|DUF946-domain-containing-protein
MEDTVLRDTEAFLAGLQGNTVYGRWLGSGGRNPTHPGNRTFIVDHAGPTETVTFTLTSSVDAYLYLLDASGNVLAEDDNSAGNLGARLAVSLAPGTYKLVAATATAGQSADLTLSSDRAPLRFSQRLLLKPVSTFQWIYDDSGTGSNDDVSIWRPNLTQAPGYYSLGDVAMPNGGGGPAPSTALVVQGEGDLLARPVDYVWVWNDKGSGGTHDGSFWEPVAPAGYTCLGAVGVLGYGKPSTDLIRCLKSEYVVAADPAALWNDSGSGADHDVGLWQPNARDHRGLPATTFVARPSHSDTGGSRYWAINKSATAHPELQGLPVSAATAAAFAPRVWLHPSEAYFPSSTEFHLANVHVEGGHQVTNQALGCDSCTDPQFLDGQRPNQTPVPVYAEVITRTVNGQPTTTTDVVYWMFYPYNNGKRVCIGWYSPWGCVGGYSTFGNHVGDWEHATVRFVEGRPSQVYLSQHASGQTFTYGDKGLGLSGWRPELFSAQGSHGLYADAARHIYRNLPNGDFLADDTGRGIAWDTWSALVPFDWRTPGTFEGSLSWLNRTERWGNPKSGCEVSEPIAGECILNDGPTGPMSKSASRPDFLPLD
>NZ_CP006003.1|WP_046718084.1|6362857_6363259_+|hypothetical-protein
MKIIRNILAVIIGLAVGSVVNMALVMLGPRVIPSPAGVDASKAESLAAAIHLFEPKHFVFPFLAHALGTFAGALVAFRVAGSHRTVFAFVIGTLFLAGGIAASFMIPAPTWFIVLDIVVAYLPMAWLATRVWR
>NZ_CP006003.1|WP_052771109.1|6361390_6362803_+|hypothetical-protein
MFVPTDWSVSSAEVQAEATAINNAMADIQRFYGTYNNGATFVLNPVQVVQANGAKEEYGISWGPGNIYDDGVITITGNMEGAVMAELHSRGYPTPPAQNQSGYVTMIFFKGAGGFAGGRGYTAGNGGQAIVGDWAIDSLQGHVAEGAYWWSGQRKQTGAVAHELGHGFGLPHPDSVGWGMETSVMGFWWDYPTIGLNDYDRNFLATNKSAFFTVPAAPTGQTATALNGTSIRVNWTDRSSNETGFQLTNGVTTVSLGANTTTYTWAGLSPNTYMCFAIRAYSATGTSPWTPWACTTTPTVPAAPTNQTATAISGTSIRVNWTDTSGNETGFQLTNGVTTVSLGANTTTYTWAGLSPNTYMCFAIRSLNAAGASAWTPWACTTTPTVPAMPTNQTATALNSSSIRVNWTDTSGNETGFQLTNGVTTLNLGANTTTYTWGGLASGTYMCFAIRSQNVAGASAWTPWACTTTP
>NZ_CP006003.1|WP_046714198.1|6360352_6360943_-|DUF2380-domain-containing-protein
MAKRGWWAVLLFLLASCASAPTVHGGAVGLLLEDDSSEDCRKAAEDDGCVTIACVGGVCGLYRCEYVASAAVAFRTGAPAAPMAGISNSPQRYWGGPQVLPGREPVLVFRKERPEELPSQKALRTARREWEQATKEKHHIFPRAFEIYFNRRGINIHEYTLAIDVKRHKQIHGGAQRCAVERGLAPVHRAHRAGCT
>NZ_CP006003.1|WP_046714197.1|6359461_6360211_-|hypothetical-protein
MRYYRLDPIDDAVAPQARWSLDAKRRWGLPGTECPRCHSSPLAIALNYPSVDLSKLPEEREYRKARVAPWDEYVQLRDRILPLLPPGAVVQPGIGMGPLAGRVRGRPSPVAMDSSWNLFAQPEGVERLLAAGLGGIKPVPTVIKAARDVPPLLEMELQVGGDYVPECRPAPAGEPCPVCGAQRRRRSVVGAEWLDATMMNGLDAFRFQWNPAMTVASERFVEVLHGMGDTGIRVTEVSVRRPSAADASP
>NZ_CP006003.1|WP_046714196.1|6357795_6359244_-|FAD-dependent-monooxygenase
MEPSGRRFGSAVVIGGSMAGLLSARVLADHFDKVTLVERDVRGEGPAARKGVPQGPHIHVLLDGGRRILDKYFPDLFEQLQVQGAELIDSSGDLAWHHFGVWKLRRTSGIPGLLCTRPLLEWNVLRRVKARPNVVVREGCSIEGLTYDEKGTGHITGVRVKTPQGEESWETDLVVDASGRGSRMPQWLEAIGYARPEEEQVIVDLSYTTCLHEPPPHFQKEWKALFLYPNPPKAWRAGFISHVEGGRWIVTLNGYFGEHAPTEYAGFLEYARSLTRPDLYDFLKEATPIGPISQHKVKDCRWRHYEKLPRFPEGLVILGDAACAFNPLYGQGMSVAGLGAELLDACLREQTGRGELSGLAQRFRERLPEVIRLPWLLGTGMDLLYRQAVGKRPFGLGLLHWYILRLMERTSTDAHVHRQFYKMLHLHEGLEAVLQPSVALPVLGHGVMSLFRPLERLANTEARPPPVTPPRPGPVPVEKSTG
>NZ_CP006003.1|WP_046714195.1|6357059_6357698_+|class-I-SAM-dependent-methyltransferase
MTTHPNARFWDGIAEKYAKKPLPNPAATARKLALSRDRLRPTDRLLDVGCGTGSIVLELAPHVAEAHGVDISPNMIAIAHRKAAAAGTANVVFHAQPAGTLDAFTDAQFDCVCAYNLLHLLDDPAALLRAMYRVTVPGGTLVTSTACLGGPLGPMFGGVLAVMRWLGKAPRVTVLRRDELRAAVADAGFVDIETPDVGDSAQNVFLMARKPR
>NZ_CP006003.1|WP_046714194.1|6356098_6357016_+|LysR-family-transcriptional-regulator
MDWNDLRYFLALARLGSVRAAGAALGVSHSTVVRRVDALEFELRTRLFDRHRDGFVLTDAGERMMPAAMRVEDEVCALTRGAAGHDESLSGTVHLTCCDEYVAGQILEDLRPWCAQHPSVEIAVTTDSRPFNLAKGEADLAVRALPRDTTPPEYLAGRRLAPIVCVNFVGAAHVERLDPRGGAARWLTIEDRRQLEPLVREGSYPGLPMWGAFSTLHLLVRAAIEGLGLVILPAYVGDAEPGLVRLPEADARHVADIWLLYHPDLRDNARVQAVRGVIREGFERRIARYAGRRADAPQRSADAPD
>NZ_CP006003.1|WP_046714201.1|6368164_6368899_-|hypothetical-protein
MGALEERLNQRPSVQALLQRQRAYDVEPRAAPVQRMSWGGAGVVQREGDSDSEDEVDADPSKYADFDRRAHEEFLRNPIYQQWVQSILAKGSVNVSTGNTDPYAPLAAWSPLARQILIQERVTPSPRRASMMAFEVTNALQTPRTDALKARALKHEFEDPSDVNAGATRYAREAERSEYDGLSMHHQMMAHGIQNLGWPAALDTYGPKLQEGGVWDTFEKYLARQEQSGHTNTHRSNYNHWVFG
>NZ_CP006003.1|WP_052771110.1|6369329_6370424_-|hypothetical-protein
MRHTLIVFLSAVLWATGCAHSGAPSLPASHGQLSLSMAYHLDPEGNPREASELPPASLFNPGARGGVAPERAREAFHEAVALLEGAPTEAQVRQASATLSAACAVDLYDACEFLLANFQREKRLEGPSPEVPAEVFRLRKPQVVVLRGRVDTDGRARELQVVEAPFPKFGEEVMRVAAATRYQPATLAGHPIATSRLFRLQFQMPLENRTQEAELEWVRLRVARFPESADAWSHLAKLLGSRTPEAPGYVEALERLNALAPTYWWAANELSWQYVQTGRHAEAESRVRVARQLAPRNAYVLETSAAVLRGLGRCEEALADQRQAVARIQEQWPREERERFEHTLADYKRDCPGGSPPAPSPVAP
>NZ_CP006003.1|WP_046714202.1|6370477_6371875_+|hypothetical-protein
MRALLTTLLCVFSLPALAEAERAVVVAMRALPAGTVLTWEMVGQRKSYPSELPREARVHEDGASYVVGQRILEPLDAGEALQWGHFSAIYRNPTDYQPYCDRIEAARRMRRAYPSPPVKPAKTQTVLVASEALLSGTVLKRKMLTPLTLPSAFASRYWVSADAIDAVVGTRLLETMLEGDVLRYPRLAPYASEPRCDWLFEDAGNRYTTKGPAEADALVCPKGTRRVEGVPGGAQWTSLMPGWVAYCELPDGRRHGPLKAWHRMKPGLEWEGAYADGQRTGRWKAWNGGVASFELTYVAGKPHGPFVEWERDGTTTAQGDFVNGRREGLWKLRGRKRDEQVHATFSQGLPHGTWKWLEADGSVARQLVFEKGIAKGDFPDAVDVAAVARDVPPGTLLTHDLLTPHKVPASLQPSVFVSRSDASNVTNQRMELGLSKGAPLLWSDSIQIPELSVSPPAPVSPAKSP
>NZ_CP006003.1|WP_082165264.1|6372072_6372468_+|PKD-domain-containing-protein
MRMRYMMVPVLSATLLFGTAAGASAAPTGESSPTRPENTLTNQTPWIYINYYITNFAVDVSVGAYDPDGSVAYLVVDFGDGATASVAGDEIITQHVYSSPGTYTITVTALDNVNGVSVERRTLLVTGRDST
>NZ_CP006003.1|WP_082165265.1|6372652_6376333_+|hypothetical-protein
MPNSQRLRRSGPLAAIALLCALACQPVKDDPSPDATPESKTRSGLAGNSRSRYPDLDAADEGSLLRPGDILDWINNGKDVFDFAKYANKCMNGGANESGCSGKDVIWKGACMLGSWGIGEILRFDPGLPLERICLGEPRLKCCKYNPSDAYCHSAFNTDYPINCEGNLTQLSAVSYGPCLAPAEGGPGCLCNYIPQCTSLVTPHPQADGWRTNQLSVTLAQAVEQGPNSLFRQAPDDFVDYVSFVGACAHQQVFLQSAPYAKPDEFPEGYPLSEEYHANDNDPDARYFRGLVTLAVQRVFSGIPNLHGRWNAVASRNWTEEEKAAYLANVPNPDATLEACVGAFGLKMLRQAAPAWYRLLAVPLEGETAPACREGWVGGAAMCSSPSLTVTTSVVGPTVTLAPDITDPDASHNDTGRYPVQLDWGDGRVEGRLYTVSNPATHALPHTYERAGTYTVTARVLNTSGLVGETLTQVTVAEGSGVPVARSVESVRFALEAAVTVGTAGVHGRVRVDAFATDVQGKVHPLGYHWVELSGAYNTPVTAPLTDWLSNRDLKDIQSLRLKPTHYDGRQVSLGELRLTGVTLQLHASPGMAPAAVSYALTNRDVKVYEPGATVPTAPLMEPGTGVLKLPLTNAEIVIDLPTPGEPPDPTLSYGCRPVYGTESPLMRSANGGCEDIASGLVFAVVPARMNWHDAVWDSALAGSPAPDGSDHGRLNDFPGGYPVTQGPDSSPTAFCHDLHQGGFSDWRLPTENELQKVASASMAGTYFPYATGHAWTSSNWDSTYALFLTLSSGARGYGNKATNQHLAVCVRSAPPAARHDCRVPTGSEQTFVSGDGGCKDTRPGGLVWSKASVAPRSWHAAIWGSELTGNVQPDAADDSRLNDYFGSKVPGSPDDSTENYCHDLVEGGFGDWRMPTDSELRAVVGSTLAATYFGFNIADTFWSSRTWDAPPTTALGIHLVGGGNSFNQKTALQRVVCVRTPDTRAAPDLVVTAFAGPTLAVTRQSLSFTWTITNAGTQDAPAAWWDDVFLSRDRYYSSDDLWLMDELHSTMLSPGASYTTTKSATLRGVPAGEWYLLIQTDSTSVVPERNDGNNAGSAFPFTVTNPDLTPTAFTAPSVAANQGTVSLSWTVTNAGTGAALANWFDSVYLSTDATYGGGDREVAYRMHTSDLAVGASTTVTATPRLPAVPAGDYYLILQSDSVGQLYESNETNNEWTALPISITAP
>NZ_CP006003.1|WP_082165266.1|6376588_6378157_+|hypothetical-protein
MESGAHASRSDLMGGRAHGVRFLLQHFQSHGEGRFIGRARSRVLETALTLHALKRADLDPAWQQRLRDHLLRHAAHTDAFSRFLALAALGHPRTDDTLEPLQRLMGTLEYAKRRKKALLLMLMVELGLTSLEHAGMVPEDFAERAVHRFSECYGAALRLIHARHSKGTSTPAAGDLALLESRQAPNGSWEQQSLITLVAMMALGPTHPAFSRGLRFLRLLEQEDGGIPFLHDVDVWLNAMIGLSLQAGALLPEARRDMSRFLARRQHPNGGWSFADGVQQTDTDSTANCAQVLLQEDAVLYAPVVHRALDYFQSLQQEDGGYPTYEREAESEVTLTANILLVQSLMLHRRPDLRPAIHRARQFLRERQRSDGRFETSWSQCETYSILRVLWALECHEQAEPDLPSDLVRERALRYLMESQGEDGGWRQSATAPAPDGLSTAYALAALCLPRCADRTPPSCPRRATGYLLRQQDARTGEFVSIPDQLGPRPISFDLPLLSTAMAVLALSLARSRPGVEPSHVD
>NZ_CP006003.1|WP_046714207.1|6378158_6379028_+|hypothetical-protein
MPTLEAFLAAPVEQVRAVAPTTLVWMVEGTRRSAALARVDLRTEAYARWTLDRMNECVRVLFHHGIRHVFTPYLTPSHFKELTPHYRDRLIDWTGLVVTEPESAALYVKNGWRVRLVGGASMPALRPHAERAVSLMPKGEHTLWCSLVDEPGAPWNELLEAVAQSGARTREEAIRALYGEDIPPATLMIGFGKPMVTPELVPPLIIGKMDCYWTQRPGYRITERELRTVIYDHVYVRRTWRQDKTGRAESAVRFRRLWEEGPTLGLGMHLGPFWYPLPFQVPHGEGTDG
>NZ_CP006003.1|WP_046714208.1|6379037_6380267_-|cytochrome-P450
MGNRLDLLSREYLESPHPLLAELRHRGPVVQVDPGGMWVVTRYDEAQQVLKSASLFSSQGLRLTAQPAWLQRVNPFADSLLFLDPPQHGRLRALISRAFTPAALAQLEARLRGVARQHVADMMDKKHVDFVDAFAMPIPATVMGWLLGLDASFQQHFMRWTHVLVTMNGVQPEGAVEMERQHRTLDEMERYFQGVLDERRSAPRDDMVSDLLRARVDGVALTHHELMSFLFLLLVAGLETTVNLLSQCARVFFQHPELLLRLRKDPTLIPRFVEETLRYEPSVMSTLRLCTQDVTLAGVELPQGALVLVSLASAARDEKYFPDGDRFILEREGPPRLSFGHGAHFCLGAMLSRMEARVALEEFVSRVERLELRTEHIDWTTSLIVRGPVTLPVEVFVPASGQPPTARIA
>NZ_CP006003.1|WP_046714209.1|6380378_6381851_-|hypothetical-protein
MLGHLERAAESFARYDEDEALGALLAAWRVCRSPALVKLCEEVERRLVANRLDAEGNEKPSPDGTREVTPRAMASTLVSETRRSSTLEMFYLDQVLRLSPNPQLGPALVSLSGRPEFQVPLNLTKLCLALKHVGPPFDIAPLQALQARLAPDNDSAGRLAFIIRMGREWVPPVLGARAEAVLRDVRNALDARGDHERRRASIREQWLPQVYAQLDDDAARLVMADELVALGDPWGEFIVLQCSPAPDEARVDALLAAHRTSWEEPLGLLVMPGTTRFERGFPVAVQLGGRATLQPPWPEPSVAWSTVREIDWGGGLDREWFMHAHLRGVRRIRRMSFEAAHDLDLHPSVIRLELCECGGHGAHLVTGPGVGWSKTFEKLALLPSLSWLELRDADPVGLRHCASSSLAKKLERLDADRQAAWRLTVRPAEQVPIEATLVSEEAVGRFVEILRAAEGFGTRGLRVRCERKLKPWEMEDLKQATEAYAHVEWA
>NZ_CP006003.1|WP_046714210.1|6381892_6382795_-|TIGR02996-domain-containing-protein
MSEDPEASRSASILEQWLPRVHANPEDDSVRLVMADQLQEVGDPLGELIMLQCSAAPDPARIDVLLAKHLRSWELPLGGLVEPGTTRFERGLPVAVRMSREAARLIPPEPGQAWCSVREIDWAGVAWSVVHGQWLAHPHLRGVTRMRRVELFWARLMGQPPNVSRLELCGPVGPQLTGTPAAADVFDRLALLPSLSWLELCDADEDDVSLCANSGLATKLSRIDIVGQGRWALTVRPDAEVPIEATLLRERAIDDFEQVLLAAEGFGSRGLRVRREHSLDAERVERLRRAASGFSHVEWV

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Crispr_ID: NZ_CP006003_22

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP006003_22

6468402-6468523

Orphan

Consensus_repeat	Method
CAAGGGCACGTCCATCGGGCGCGCCCTGAAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP006003_22

>merge|NZ_CP006003|22|6468402-6468523|CRISPRCasFinder
CAAGGGCACGTCCATCGGGCGCGCCCTGAAGTGACCCGGCTGAATCCGGCCTCTTCGCGTGCTTCGTGCTGGCGCGGCTCGCGCGGCGAAGCAAGGGCACGTCCATCGGGCGCGCCCTGAAG

>NZ_CP006003|22|20|6468402-6468523|CRISPRCasFinder
CAAGGGCACGTCCATCGGGCGCGCCCTGAAG	TGACCCGGCTGAATCCGGCCTCTTCGCGTGCTTCGTGCTGGCGCGGCTCGCGCGGCGAAG
CAAGGGCACGTCCATCGGGCGCGCCCTGAAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP006003.1\|WP_046714270.1\|6471359_6473603_+\|histidine-kinase	unknown	unknown	gnl\|CDD\|236901
NZ_CP006003.1\|WP_046714258.1\|6448874_6449213_+\|TerB-family-tellurite-resistance-protein	unknown	unknown	gnl\|CDD\|143581
NZ_CP006003.1\|WP_046714263.1\|6459428_6460445_-\|endolytic-transglycosylase-MltG	unknown	unknown	gnl\|CDD\|381750
NZ_CP006003.1\|WP_046714272.1\|6477524_6478268_-\|NAD-dependent-deacylase	unknown	unknown	gnl\|CDD\|234777
NZ_CP006003.1\|WP_046714269.1\|6468855_6471252_-\|transglycosylase	unknown	unknown	gnl\|CDD\|381604
NZ_CP006003.1\|WP_046714264.1\|6460657_6461524_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_CP006003.1\|WP_046714273.1\|6478881_6479793_-\|pseudouridine-5'-phosphate-glycosidase	unknown	unknown	gnl\|CDD\|377251
NZ_CP006003.1\|WP_046714260.1\|6449985_6452859_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046718096.1\|6478371_6478857_+\|diguanylate-phosphodiesterase	unknown	unknown	gnl\|CDD\|224867
NZ_CP006003.1\|WP_082165270.1\|6456302_6459314_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046714265.1\|6461783_6462473_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_082165274.1\|6475780_6477475_+\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP006003.1\|WP_046714271.1\|6473689_6475657_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|223562
NZ_CP006003.1\|WP_082165272.1\|6462914_6464516_+\|tandem-95-repeat-protein	unknown	unknown	gnl\|CDD\|380078
NZ_CP006003.1\|WP_046714259.1\|6449273_6449813_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046714275.1\|6481174_6482890_-\|sigma-54-dependent-Fis-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225114
NZ_CP006003.1\|WP_046714274.1\|6479894_6480803_+\|EamA/RhaT-family-transporter	unknown	unknown	gnl\|CDD\|273359
NZ_CP006003.1\|WP_046714276.1\|6482944_6484117_-\|DUF2314-domain-containing-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_082165271.1\|6462469_6462784_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_082165615.1\|6453160_6456067_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP006003.1\|WP_046714258.1\|6448874_6449213_+\|TerB-family-tellurite-resistance-protein	gnl\|CDD\|143581	cd07177, terB_like, tellurium resistance terB-like protein. This family consists of tellurium resistance terB proteins, N-terminal domain of heat shock DnaJ-like proteins, N-terminal domain of Mo-dependent nitrogenase-like proteins, C-terminal domain of ABC transporter ATP-binding proteins, C-terminal domain of serine/threonine protein kinase, and many hypothetical bacterial proteins. The function of this family is unknown.	1.1882e-06
NZ_CP006003.1\|WP_046714263.1\|6459428_6460445_-\|endolytic-transglycosylase-MltG	gnl\|CDD\|381750	cd08010, MltG_like, proteins similar to Escherichia coli YceG/mltG may function as endolytic murein transglycosylases. The gene product of Escherichia coli yceG/mltG has been erroneously annotated as an aminodeoxychorismate lyase. Its overexpression has been reported to cause abnormal biofilm architecture, and it has been reported to be part of a putative five-gene operon. More recently it has been proposed to function as a terminase for peptidoglycan polymerization. The family also includes Streptomyces caeruleus NovB, an uncharacterized member of the novobiocin biosynthetic gene cluster.	5.54968e-76
NZ_CP006003.1\|WP_082165274.1\|6475780_6477475_+\|serine/threonine-protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	3.47124e-106
NZ_CP006003.1\|WP_046714269.1\|6468855_6471252_-\|transglycosylase	gnl\|CDD\|381604	cd13401, Slt70-like, 70kDa soluble lytic transglycosylase (Slt70) and similar proteins. Catalytic domain of the 70kda soluble lytic transglycosylase (LT)-like proteins, which also have an N-terminal U-shaped U-domain and a linker L-domain. LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. Proteins similar to this family include the soluble and insoluble membrane-bound LTs in bacteria and the LTs in bacteriophage lambda.	2.10351e-69
NZ_CP006003.1\|WP_046714264.1\|6460657_6461524_+\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	2.67326e-39
NZ_CP006003.1\|WP_046718096.1\|6478371_6478857_+\|diguanylate-phosphodiesterase	gnl\|CDD\|224867	COG1956, COG1956, GAF domain-containing protein [Signal transduction mechanisms].	2.34624e-54
NZ_CP006003.1\|WP_046714270.1\|6471359_6473603_+\|histidine-kinase	gnl\|CDD\|236901	PRK11360, PRK11360, two-component system sensor histidine kinase AtoS.	1.61405e-68
NZ_CP006003.1\|WP_046714272.1\|6477524_6478268_-\|NAD-dependent-deacylase	gnl\|CDD\|234777	PRK00481, PRK00481, NAD-dependent deacetylase; Provisional.	3.72798e-100
NZ_CP006003.1\|WP_082165272.1\|6462914_6464516_+\|tandem-95-repeat-protein	gnl\|CDD\|380078	pfam17963, Big_9, Bacterial Ig domain. This entry represents a wide variety of bacterial Ig domains.	1.2974e-12
NZ_CP006003.1\|WP_046714271.1\|6473689_6475657_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|223562	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only].	0
NZ_CP006003.1\|WP_046714275.1\|6481174_6482890_-\|sigma-54-dependent-Fis-family-transcriptional-regulator	gnl\|CDD\|225114	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms].	4.01576e-62
NZ_CP006003.1\|WP_046714274.1\|6479894_6480803_+\|EamA/RhaT-family-transporter	gnl\|CDD\|273359	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter. [Transport and binding proteins, Amino acids, peptides and amines].	2.72443e-19
NZ_CP006003.1\|WP_046714273.1\|6478881_6479793_-\|pseudouridine-5'-phosphate-glycosidase	gnl\|CDD\|377251	pfam04227, Indigoidine_A, Indigoidine synthase A like protein. Indigoidine is a blue pigment synthesized by Erwinia chrysanthemi implicated in pathogenicity and protection from oxidative stress. IdgA is involved in indigoidine biosynthesis, but its specific function is unknown. The recommended name for this protein is now pseudouridine-5'-phosphate glycosidase.	2.91341e-142

>NZ_CP006003.1|WP_082165272.1|6462914_6464516_+|tandem-95-repeat-protein
MDGGLAGPRRPREPRWRRAGHHALGDVSRGVLARAASDGRLRRNLLARALGLAASRGLDAQHDSWHPDDGVRQHPGHASGPGRRAVERHLRRGHVREARAVPRGLYSRFEGPPHGTHRVFTRAARYNTAPQVTDRSYDLVESTPLDLTLTVRDVEGDDVTFSISEKPAHGAVTGTPPDVTYTPESGFRGEDRFQFTATDAQGMASTATVRVKVLRAPVAPQVEPLGIELDEDTSVTLRLRATDENGDALTYLIGPPPMHGTLMGTPPDISYTPHPDFNGTDFFEYAASDGRLESARVRVSITVHPIDDAPVAEDSSYVVDRDASVAIVLKAHDVDGDALTYSVAQPRNGTLTGTAPDLVYTPFPHAREDESLVFTVSDGKRVATGTVTIDVRFLNVPPFAVDQQVSVNPGESIDIELDVENLDGDVLTYELTERPASGTLSGEPPHLRFQASDSFTGQVSFTYVVSDGLESATGRVFIRSLARPVDAPAGKSGGCSSSGGAPSLVLMLGVLALLGRRPRTLGLVRARATKHLG
>NZ_CP006003.1|WP_082165271.1|6462469_6462784_+|hypothetical-protein
MTPGGFPITQSARDQQHPAVAFDGANFLVTWTETESDTINVLARRVPAFGAPVTPEFRLQSNERPSARPRLACDTKTCFVAWYSPSMERTSCWSTARASARART
>NZ_CP006003.1|WP_046714265.1|6461783_6462473_+|hypothetical-protein
MFSPERPVGATRWGPAYLSQTESALAWGTSSYLEAWVDERHGIHGEGGEGTQIYATRLNSSGEVLDPAGIRLSTGSHVPLYHQGISIAGDSTGFLVVWQDASLDGITDAPFRGTRVGADGQVLWAGRELLRPRPGTSTLTSLAFTGDGYLLVWNERPDGGPGRRIRAARVELDGTVLEPRGVSRRRPIPSSRPRPPPAAITTWWSGASRTRSLKARTSSAPSWMTRASR
>NZ_CP006003.1|WP_046714264.1|6460657_6461524_+|alpha/beta-hydrolase
MATQTSTGAGKISGSYLTTRDGTQIYFKDWGPRDGQPIVFSHGWPLSADAFEDQMMFLSDRGYRTIAHDRRGNGRSSQPWSGHDMDHFADDLADLTSALGLSKAVHVGHSTGGGEVARYIGRHGTSRVAKAVLIGAVPPIMLKTDWHPNGLPMKVFDDIRAGVRTDRASFFRELSMAFFGFNRPGAKVSEGLRDTFVMQGLMASIKAEYDTVKAFSETDFRADLAKFDVPTLVMHGDDDQIVPFEGAGKLTATLVKGAKLKVYPGFSHGMCSVNKGIINEDLLAFIQG
>NZ_CP006003.1|WP_046714263.1|6459428_6460445_-|endolytic-transglycosylase-MltG
MKKVLAALSVVIVLAAVAGVGAFVVMEGAVNKAVAAPGAPVVEFTVPKGTSGRGLGGLLVTQGLLSDTKVWRYHLFRRGGFSPKAGRHPVSPSMTVAELAKALEGNPLPDDIPFVVVEGWRLRDTDAALVAANLIKPGEYIAAASNPSRFKAPFPLPVTTLEGYLYPETYGIIPGDVDVEDLIQRQLDAFAARFYTPNKDAITQSGRSLHEVVVMASMLEREEPVPAQRPLVAGILWKRVDKGFPLGVDATSRYVLAQWNDRKEFLKRLRDPEDPYNTRHRKGLPPGPIGAPTVESLQAAMAPKPSEFWYYLHDAQKNLHPSRNADEHEALRKKYNVY
>NZ_CP006003.1|WP_082165270.1|6456302_6459314_-|hypothetical-protein
MRRKTVGAVGWGLGVALGLLGGCGPSQHGERSSTPPVVASPDTSPESSDEELVTRTVTFGAGADTHVVATSPTTSFGSSPTLEVDRAPESEAYLRFYIEPFSGTVTTARLRVFAVDGSADGPTVYDPPGVRSWNELTTWNNRPDWGGYWGVVSAGAVASGTWMELDVSDMSISQGSYVDVFLRADGTDGMTLASSEHPDPALRPQLVLTLESASDHPPPRPAPLTVSGAPVSFAPGADTFVSEDAPGSAEGGSARALRVGSSPGREAHLRFSVTGLTETVQRAVLRLRVAADGTEGGPSVFGTQGTWSESAMTWSTRPARVGGTLDRAPFLAPYGFVEYDVTNQVRGNGDVTFGLYGNSGDEVAFHSREAADLEPRLFVWAGASRSEPGDDCMTRQEVIATSVPPLHDTYATPETPSTTYHREASLRVDGAPRAEGFLDFDVQLGAQPVRRVLLRLYALDASANGPQVFSAQSFDEATTDWAHRPVVSGSALANLGAVARDSWVEIDVTDVVTTSGRHAFALVPDSADGLRFASAEASERGIIDAAPQLVVVKDAAPRCSYRGTKPSGTTAWVRQSTAVEAERSHHTAPAPGGGFVVLSHQEQTRDAPGSAEWTDVITLHRADGSMVWTRAFTQAQVSFTRVAVTAQGHVLAAGSYAGTPDLGTGALPQGTGMFVLELTASGAVEWTRGYTAWFQRADERLDNPMQVLDLATDAQGGAVLVGTFWGYTDFGAGPVYSGKPFPYDDTYPNSYVLKLDGQGGYQWAKLLLADTLRGTQATSVAVDAAGQVTVGGWAGRATDFGVGPDARIGPFVARWDASGAHRWVRVIPVYFSSLRALTVMPDGGVAFIGDFGGRFDFAGQSYASREPDEYDGGPRDTMLGRLSATGADVVLRTFRELTFQDLIVDAQGHLVTTQAGGGSLLGLGDVGPLESEAPYRPTVASFTDALETRWVRVFDPLQSNLLLTSQPGGILFTGDLVGAFEVDGVWYTPTSRRSDVLHLLLRP
>NZ_CP006003.1|WP_082165615.1|6453160_6456067_-|hypothetical-protein
MEQERDALVTRTVSIIAMADTHVSSAQPTSSFGSSQTMVVGRAPESEAYLRFFVAPIPEGRITTARLRVYAIEGSSDGPTAHGPGVYRSWNEETTWNTRPVHSTSWLATSAVVPDGSWMEFDVTNVHVGPNSFSDLFLKADGDDSVTIASSEHPDPALRPQLLLTVESAPDHPTNPLVPFAVATPPLTLVAVADTFVSADAPTSSAGGSADTLVVGNAPEREVHLRFNVQGLPETVQRAVLRLHLGFDGTTGGPSVFATQGPWNESSVTWNTRPTKTGRELDRMPFLEPWGYVDYDVTAHLRANGSVTLGLYGRSADEVTFHSRESDLSSANPPQLLIWTGTPREAPMDACLTRRELQTTTVLPLHDTYVDALHATRTFHREATLRVDASPGAVSYLDFDVKPFPGQVRRVLLQLYALEATGSGPRIFKAQPFDPYTISWHQQPTTLYPFGDLGPVKKDQWVEYDVTNEVTAPGRHAFGLVPDSSDGLSFASVDAHWGYILHAAPRLVIVTESEPFCSYRGTNPAGGMLQGTQAGRPEAERSRDTASVPGGGFVVLSAVEQTLDSTPWSSQTDVVTLHREDGGVAWSREFPQANVEFRKVTVTTLGNVLVAGEYRGAPDLGKGALPLAGNTGLFVMKLTPSGAVDWTRGYTAWFDDGTVRHENPMAVYDLATDAHGSAVVTGSFWGSTDFGGGELRSGKTFPYDESLPNSFIVKLQWDGAYAWAQTLKSPGIRGAQAMALTVDAQENITVGGTTGQGIDFGDGPVYRNGLFVARWSPSGVYQWSRVMGVNHSRMSGVVVLPDGGVVFAASFEGGLAFGGRTYASKEPDEYEGGPWDAVLGRLGPTGEEVSLRHFQQTPARSSFFQDLVLDGAGNLVVSLGGFGGLLGLGEVGPPGVTSPPRPAVASFTASLETRWVRVLDVLQSDLRLAPGAEGIIVTGDFAGAFELDGTWYTSTAQRSDLLHFKLRR
>NZ_CP006003.1|WP_046714260.1|6449985_6452859_-|hypothetical-protein
MAIVAAADTYVSAASPATSFGSQPTMEVDRSPESEAYLRFYVAPVDGTITTARLRVYALDGSADGPTAHDPRIGGRAWNELTTWNTRPTRDGFSALSSAGAVASGTWIELDITEMHISTSAFTDVHLVADSTDGVTIASSEHPNTSLRPQLVLTVQSADDHPPHPALPITVSSPPVVFTASDDTYVSADAPTSTEGGFATDLRVGQSPDREVHLRFDVLGLTESVQRAVLRMYVGLDGTAGGPAVYATQGPWSEMSVSWNTRPTKVGAEVDRLPYLAPSGYVDYEVTDLVRGNGNFTFGVYGTSGDALIFRAKENWEGAGPQLLVWTGAPRAAPTDACMTRQELVSKVSELRHDTYVSAERPTTTFHREASMRVDGSPGMNGFLEFDVQLDATPVRRVLLQLYALEATDNGPLLYKSQPFDPATATWQNPPAMTDLVGDAGAVKKDQWVEYDVTSVVTASGRYAFGLLADSSKGLSFATGDASAKGLLDAAPRLVVVTESAPFCSYRGTRPSGTTAWVKQTNNASAERARDTAPAPDGGFAVVGTQAQARDGEYWAEQADVVTLHRADGSVAWRLTFAQPDVEFRKVTVTALGNVLVAGEYRGTPDLGKGALPRGTGMFVMKLTPSGAVDWTRGYTAWFRMDDELLDNPMFVHDLATDAHGSAVVTGGFWGKTDFGGGEVDAGKPFPYDDEYPNSFVLKLQWDGAYQWARVLKTNAMRGTQAVSVAVDAQENITVGGWAGPGTDFGAGALAQGGVFVARWNVTGDYLWHWLLPTSYDTVFADVRQVAVLPDGGVAFTGDFDGRFTFAGSPYASAEPDDGYDGPREPFLGRLTSTGTELTLRHFPMGTGIYFSGLNSLTADANGNLFTVQSGHGGLLGLGTVGLPETVAPERPTVASFSSTLQTRWVRVLEPLQSLRLTAVTGGVVLTGDLGRSIELEGTWYTPTSRRLDLLHVKLRP
>NZ_CP006003.1|WP_046714259.1|6449273_6449813_-|hypothetical-protein
MTPFPKKLQDRAEALEAADEQLTTLDEDGLLAAPVDIFSMLRDGIDLHESLKDTSRTFASNDCVVVTGNVDVETLVLKGPGGMLVLGDLRVGTAELHANVLVLGNCEISERVVGHDEPHTLTVLGEVQGGRAEMQKQFIMQFLGGGKLTALVDSEGGAAELLELLSGAGSELEVDEVDP
>NZ_CP006003.1|WP_046714258.1|6448874_6449213_+|TerB-family-tellurite-resistance-protein
MSTASSPDARFQIEVLKLLLQVASGDEGVSREEIDHIMATARGMSVPLPDLEQLAKCLQNGTPLPAPNLGILKADPKAVIAAAHDLIASDGHIHPSEIEMLRQLRELLGVAA
>NZ_CP006003.1|WP_046714269.1|6468855_6471252_-|transglycosylase
MKPFLPKLAVIASALMLSAQAPSSPAPSGTEASEAPTTQTENAPPEAQLSPPPDAEKAPLPPGFVEVFNPAFPNAAPPAPVVHRGRRYALEDLSPYFGEGKKKEARAAFDKGHFARARELLKDEGDSPPVRYLRALAALRSGDEETAAKELAALAPDYPALRDRCLTHSGVALEGLRRYDEAAVQLAQVPPESRLYVDARLALSRVLRKKKDAEGAMAALEPLTSRAAPSWGRNVGAEALMAIADIAAEKKDKAAERAALWRLWGAHPLSPLAVQADKRLKGQTAPLEARVTRGEALVELHRNKQGLAQLEPLLTQLKLPDALACRAHFSYGKGLRKEREHTRAIQTLSPVVEKCTDRDLLARALYVLGSSRSIVDSSRGTETYERLAREFPDHSFADDALFYAADLYVKTDRPKEAMARLDELARLYPQGDFLGEALFKAYWIARTSKVEDAGLSFLDRIEQRFAQADESYDVERARYWRARTFQDQGNIQGAAELFEKISVEHPATYYGLMARSQLSALDPQRLERISPEIFAVPEAASPWPLFAGPVGEDPHFRAGVELLRLGFPEAVSSELLAVSRTNQPAEAIRLLVLVLHEAGDERAAHAVARLALRKDLSGRITSETRVVWEVAYPNAFRDLIEKHTAVSGVEADLLQALMREESALDPKALSWAGALGLTQLMPSTAKGVARELKLKRFTVDQLLQPDLNIRFGAHYLGGLLKKFGGHTPYAVGSYNAGPGAVNRWRADKPDLPLDAWVEEIPISETRGYIKRVLRSYNTYQLLYGRAPKLPVIKTANRE
>NZ_CP006003.1|WP_046714270.1|6471359_6473603_+|histidine-kinase
MDIRTQSALLASIIGLALGVSMLLRPARPKVLTLYSVFALTVAGYYLSFFFHSLFPEVTYPWAHRITLGITVLVASLIPGAAVGFFLEFLDVSKGTHLVGRRLALLSVFLGLAVAVTPLADKLWARVAMGVWVHGSLLASVSLLLHRVRSNESRIEQLRLMYLAIGAAAGILFSALDFIGSSVPLPTLGPVFTTLYLFFLAQTLLRLRLMDLHELLGKIASQTVLAVILAAVFTVLTAWVDEDTGLFLFNTVVAAFVILILLDPLRAKVEEMVVRIFFRERFALLDALGMLRARMANVIEISELARLVLDTLHETGRVTHSSVYLLAEDRPGYRLLDSRGPLPVAFLDTAAARGLLFAVASGQKAVLLENVERRGATMRLQSVEGRRYRDELKRLNDTRAALVQMRAGISVPLVGNDRVIGFLNLWDERVPEAYASDEIALILEVAEKLATVLENSKLYEKIRERDRLAALGEMAAGLAHEIRNPLGAIKGAAQCLDPRRLPGEDGEFLEVIVEEVNRLNGVVTAFLDYARPMKQSFGPTDLNEVVTRTMRLIQNDVPSSVALAVELDLQLPRVDGDAEQLKQVLINLVQNAVQALDTREGRITVRTERPERFGEFRNAGGELLEVRVSDTGPGIPSDQQPHIFVPFFTTKQKGTGLGLAICQRIVKNHGGSISVQSKAGDGTTFIIRMPALPVEKPVEALPEGTGTPPPATRISQSIPVPEELREPPKPPSPAPRASKRERKRKAG
>NZ_CP006003.1|WP_046714271.1|6473689_6475657_-|ABC-transporter-ATP-binding-protein
MSLVIAQDLSLSYGKKVLFDSDNFTLGPKDRVGLVGANGTGKSTLMKILAGVLQPDSGSLTYRRRARWGYLPQEIAGLPEGTVVEAVMSTVPGRDSLEVRLKDTEEALSAATDEEEQLELAQSLADLHAELDDFENRFGKHHAERILKGLGFRDLDLAKPTSALSGGWRMRAALAGLLLQDPDLLLLDEPTNHLDVPTLAWFDGFLRRSNKALVLISHDRDFLNRQIDRVVSLELEGVREYAGNYDDYKRLRAEEKELLKARAEKVEARRAELQGFIDRFGAKATKAKQAQSRAKMLEKLEKVHVLEERSTMRFRFPEVDRSGRDVVTLERITKKYGAQTVYDGLTGRVERGQRIAVVGANGAGKTTLLKMVAGELAPDTGTVTLGHNVVVGYYAQHHADKLDRTNTIIEEVRPLAADKPESYVRGVLGAFLFSGDDVDKPIGVLSGGERARVALAKLLLVPSNFLLMDEPTNHLDLDSSEMLIEALKGYGGTLLFVSHNRSFINGLSSHVWEVAEGKLTPHPGNLDDYLYHQEQQRLEAEAAAAGASRGGEKASSGPVSEKDRKRLEAEARQRRSVVEGPLKKEIAKLEEQIAKVEAEQKEREAQLADPVLYNDFARAKPLMDAHRAGKDSLEDLYARWETAQEKLAEATASLG
>NZ_CP006003.1|WP_082165274.1|6475780_6477475_+|serine/threonine-protein-kinase
MAAPCPHCGSTDGVDHLCAGQSLQLIGQVLDGRYKIESVLGQGGMGMVFRATQTSVQRPVAVKTLNPSLAAAPQFFERFRREAEIASRLRHPNVITIFDFGRAPDGTCYYVMELLQGESLKEVVKREGPMSLRRATSLLEQATQGLAHAHAEGCVHRDLKPHNIMVQDLGGRDFVKVLDFGLVKALEAEEEEQLTSTGQVLGTPQYMPPEQAGGESVDQRSDLYSMAGVLYFCLTGSSPFGANTVRKALTASLTQQVPAVNTKRQGAPVPPALDAFFRKALAPEKDDRYQNAQEFIDAMMDSVADATPEQFDAMPSGGSSSGVNERGSGSRASSRAGRPSAGSGSGVRSRAGGAPGRGSTPSNVVVARSQAGVPGGSGSSPSRVRQGPARPAPVQAPPPEEAPEPEGMSTGKKAALVVVPLLLLGIAAAVVIGGQGGAKTPPTQVVEVPRDRPTSPPTTTANTPPTAQSIRVKFNSSPAGAAIFEGEEQIGTTPIELMLPRDKSHQLTFRLANHKSEERSLNFSRVAGDSQTVDVSLEPIRAATPPKPRPTRPTNSGQEINVFE
>NZ_CP006003.1|WP_046714272.1|6477524_6478268_-|NAD-dependent-deacylase
METLLLDSNTWLLVLTGAGVSAESGVPTFRGMNGLWEDQPVTEVASPQGFAKDPLRVWRFYSQRRAGAADVSPNPGHDALVAWERHLGDRFLLATQNVDGLHRRAGSQRVVEMHGNLFTTRCSNPDCTRAPFPDTTVYASGTVPGCKECGALLRPHIVWFGEHLDPDDLTRIESFAVNAVRSGGRLVFLAAGTSGAVYPAAGMVDNVRAAGGETWLVNLDASENASSFEHFVQGKSGEVLPKLGRLA
>NZ_CP006003.1|WP_046718096.1|6478371_6478857_+|diguanylate-phosphodiesterase
MAEITLNLVAVPKAQAYEELQQHVKAALAGIDDPIAGMATMSCLIHHAFGHLWTGFYRVVTPGKLLRVGPYQGTLGCLEIKFGKGVCGTAAEKGETQVVADVHAFPGHIACDARSASEIVVPVYGKNRELIAVLDIDSATKSTFDEVDRRELETMMRWFQE
>NZ_CP006003.1|WP_046714273.1|6478881_6479793_-|pseudouridine-5'-phosphate-glycosidase
MDLRFSDEVRRALDSHQPVVALETSVVAQGLPYPDNLAAARACEEAIRRTGAVPAATAVVDGQVCIGLEDVQLRRLAEGKEKLLKLGSRDLAIAVATRATGGTTVSATCELAAAAGIRVFSTGGIGGVHRGASEHWDISQDIGALARFPVAVVCAGAKSVLDLPKTMELLETAGVPVIGVGTRELPSFHSRESGIQLEHSVGDVATAARIARARFETLGQGGVLYTVPPPEETALPRHEVELQIASTLAEAERQGIRGKDVTPFLLRELGNRTGGKTLKANLALLANNARFAGQLAVAYARGD
>NZ_CP006003.1|WP_046714274.1|6479894_6480803_+|EamA/RhaT-family-transporter
MSTTVTSAPAAPSRTFSANDVAILCVVVVWGTNYTVVKEALGTIPPLAFMAVRFAIASVAMAALLLVVEGWKPLSRPVFLKLAALGLVGNTLYQLCFILGLANTTAANSGLLTAVTPVLVAALGAALGVERPSRPLVMGMSLAVVGMVLVVAARGPSLGTGTRLGDGLILGACACWALYTVGIRSVGNEVSALRITAITMLTGAPGVVLAGVPEVLALDVGSIGFGAWAGVVYSALVPLVLSYFIWGRTVQQVGSARASLYNTGVPVVAALTAWGVRGERPTWLQALGAALILGGVLLSRRK
>NZ_CP006003.1|WP_046714275.1|6481174_6482890_-|sigma-54-dependent-Fis-family-transcriptional-regulator
MPALLLLTGPSAGRHYEVLSDMAIGRSPSCEIPLRDDQVSRKHAQLTVHEGQVRLTDLDSRNGTLVNGARISGQVVLQPGDRVRVGSTMAVFEPAPVTLVEGGPTSPGHVPIEEVLPHVGAAAALYSAGTALLGATSEAMVLRRLADETARALSADRAAALLGSNTGLLTAAVSGADAVAVPRSLAQVALDRKELVQAETEMCAPLVASGGKPFGVIYATRADSSFTGGEGQLLAALGRLGGEAYTAVRSRVEAEAPVPVLLGTSRPLRALADAARRAANSAAPVVLHGEPGTGKTLMARVIHARSPRALEPLVTVDCRLPQEAVEEALFGRASAPGQPPVASALLRADRGSLLLQHVEALPRATAERLVRLLARRTAPARQGGEEPVDVRLLVTSLAPVAASGSKGEVDAALARALMGFELEVPALRERRADVMALLEGFLARASRRVRSEPPTLGPDARRLLTDYPWPHNVRELELVGERLGLLYAGARVGALHLPPEVQQGAAASDAQTLQARVGRLERDAIAEALREAGGKKVRAAALLGISRPTLDKKIEEYGLSVERGRRGEDGR
>NZ_CP006003.1|WP_046714276.1|6482944_6484117_-|DUF2314-domain-containing-protein
MEVYLLATEQEGPVPLDALRASFATDEVEFTPDEDAQGFVLRADSSEVRVRLTVGPEGLPKFNKAAYSGSPEAFARLGKARAYYHLSLEPGGAQPTLPVFEALWAVRTLLEHVPGVLVDLAAYKLHEPEDVVEITELDFDIRDHVHLHAVEVTEGDTPLWVHSHGMEKFGARDLEIFHLAEQDLLPAESFLHELCTDLAFGQGPALRSQVGTSEGQAFMVVPSEEARANLLGVPLETFEGHEGLFLTVVSPLGRHNTSQLLAPYRERFSQEPEEQTESMRREAQALLPAFLARFQRRGLMEPLTFLVRAPFDTHPDGNKVVENLWLELMARDDGSLVGKLVDGAVHTTEWRKGAHVEVEETQVNALALSREGRALDESEIRALLNAERPM

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Crispr_ID: NZ_CP006003_23

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP006003_23

7006687-7006901

Orphan

Consensus_repeat	Method
CCCGGCGGCATGCCCGGACCCGGAGGACGCGGAGCGCCAGGGCCCGGCGGCAT	CRISPRCasFinder

1 spacers

WYL

The CRISPR arrays of NZ_CP006003_23

>merge|NZ_CP006003|23|7006687-7006901|CRISPRCasFinder
CCCGGCGGCATGCCCGGACCCGGAGGACGCGGAGCGCCAGGGCCCGGCGGCATCCCGGGGCCAGGAGGACGCGCCATGCCAGGACCCGGCGGCATGCCCGGACCCGGAGGACGCGGAGCGCCAGGACCCGGCGGCATGCCAGGGCCAGGAGGACGCGCCATGCCCGGCGGCATCCCGGGACCCGGAGGACGCGGAGCGCCAGGGCCCGGCGGCAT

>NZ_CP006003|23|21|7006687-7006901|CRISPRCasFinder
CCCGGCGGCATGCCCGGACCCGGAGGACGCGGAGCGCCAGGGCCCGGCGGCAT	CCCGGGGCCAGGAGGACGCGCCATGCCAGGACCCGGCGGCATGCCCGGACCCGGAGGACGCGGAGCGCCAGGACCCGGCGGCATGCCAGGGCCAGGAGGACGCGCCATG
CCCGGCGGCATCCCGGGACCCGGAGGACGCGGAGCGCCAGGGCCCGGCGGCAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP006003.1\|WP_046714600.1\|7010293_7011841_+\|hybrid-sensor-histidine-kinase/response-regulator	unknown	unknown	gnl\|CDD\|223715
NZ_CP006003.1\|WP_074955215.1\|7015128_7015485_-\|response-regulator	unknown	unknown	gnl\|CDD\|381103
NZ_CP006003.1\|WP_046714596.1\|7002282_7006071_-\|valine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235582
NZ_CP006003.1\|WP_046714604.1\|7015575_7016649_+\|tetratricopeptide-repeat-domain-protein	unknown	unknown	gnl\|CDD\|240572
NZ_CP006003.1\|WP_046714601.1\|7011837_7013016_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046714590.1\|6996068_6997037_-\|fructose-bisphosphatase-class-II	unknown	unknown	gnl\|CDD\|236536
NZ_CP006003.1\|WP_046714589.1\|6995609_6996035_-\|SRPBCC-family-protein	unknown	unknown	gnl\|CDD\|176854
NZ_CP006003.1\|WP_046714606.1\|7017712_7018351_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP006003.1\|WP_046714593.1\|6999193_6999664_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046714588.1\|6993853_6994921_+\|ADP-ribosylglycohydrolase-family-protein	unknown	unknown	gnl\|CDD\|377122
NZ_CP006003.1\|WP_046714592.1\|6997561_6999178_+\|alkaline-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|293740
NZ_CP006003.1\|WP_046714595.1\|7000660_7001386_+\|transcriptional-regulator	WYL	COG2378_WYL_CAS-I:CAS-III	gnl\|CDD\|225253
NZ_CP006003.1\|WP_046714594.1\|6999815_7000577_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|184875
NZ_CP006003.1\|WP_046718180.1\|7008400_7009777_+\|diguanylate-cyclase-response-regulator	unknown	unknown	gnl\|CDD\|143635
NZ_CP006003.1\|WP_046714591.1\|6997050_6997461_-\|acyl-CoA-thioesterase	unknown	unknown	gnl\|CDD\|223894
NZ_CP006003.1\|WP_046714602.1\|7013316_7014960_-\|chaperonin-GroEL	unknown	unknown	gnl\|CDD\|234573
NZ_CP006003.1\|WP_046714605.1\|7016602_7017607_-\|epimerase	unknown	unknown	gnl\|CDD\|187540
NZ_CP006003.1\|WP_074955678.1\|7001389_7002244_-\|nicotinate-nucleotide-diphosphorylase-(carboxylating)	unknown	unknown	gnl\|CDD\|238806
NZ_CP006003.1\|WP_046714598.1\|7007534_7008350_-\|defective-in-fruiting-DifE	unknown	unknown	gnl\|CDD\|366716
NZ_CP006003.1\|WP_046714599.1\|7009780_7010176_-\|ferritin	unknown	unknown	gnl\|CDD\|275328

Protein	Function_ID	Function_description	E-value
NZ_CP006003.1\|WP_046714600.1\|7010293_7011841_+\|hybrid-sensor-histidine-kinase/response-regulator	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	3.96946e-34
NZ_CP006003.1\|WP_046714604.1\|7015575_7016649_+\|tetratricopeptide-repeat-domain-protein	gnl\|CDD\|240572	cd12952, MMP_ACEL2062, Minimal MMP-like domain found in Acidothermus cellulolyticus hypothetical protein ACEL2062 and similar protein. The subfamily includes an uncharacterized protein from Acidothermus cellulolyticus (ACEL2062) and its homologs from bacteria. Although its biological role remains unclear, ACEL2062 contains a minimal metalloprotease (MMP)-like domain consisting of 3-stranded mixed 2-beta sheets and a HExxHxxGxxD/S (x could be any amino acid) motif. It may belong to a superfamily of bacterial zinc metallo-peptidases, which is characterized by a conserved HExxHxxGxxD motif.	1.50049e-35
NZ_CP006003.1\|WP_046714596.1\|7002282_7006071_-\|valine--tRNA-ligase	gnl\|CDD\|235582	PRK05729, valS, valyl-tRNA synthetase; Reviewed.	0
NZ_CP006003.1\|WP_046718180.1\|7008400_7009777_+\|diguanylate-cyclase-response-regulator	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	2.68522e-54
NZ_CP006003.1\|WP_046714590.1\|6996068_6997037_-\|fructose-bisphosphatase-class-II	gnl\|CDD\|236536	PRK09479, glpX, fructose 1,6-bisphosphatase II; Reviewed.	0
NZ_CP006003.1\|WP_046714589.1\|6995609_6996035_-\|SRPBCC-family-protein	gnl\|CDD\|176854	cd07812, SRPBCC, START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC) ligand-binding domain superfamily. SRPBCC domains have a deep hydrophobic ligand-binding pocket; they bind diverse ligands. Included in this superfamily are the steroidogenic acute regulatory protein (StAR)-related lipid transfer (START) domains of mammalian STARD1-STARD15, and the C-terminal catalytic domains of the alpha oxygenase subunit of Rieske-type non-heme iron aromatic ring-hydroxylating oxygenases (RHOs_alpha_C), as well as the SRPBCC domains of phosphatidylinositol transfer proteins (PITPs), Bet v 1 (the major pollen allergen of white birch, Betula verrucosa), CoxG, CalC, and related proteins. Other members of this superfamily include PYR/PYL/RCAR plant proteins, the aromatase/cyclase (ARO/CYC) domains of proteins such as Streptomyces glaucescens tetracenomycin, and the SRPBCC domains of Streptococcus mutans Smu.440 and related proteins.	8.14727e-18
NZ_CP006003.1\|WP_046714606.1\|7017712_7018351_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	9.6816e-10
NZ_CP006003.1\|WP_046714588.1\|6993853_6994921_+\|ADP-ribosylglycohydrolase-family-protein	gnl\|CDD\|377122	pfam03747, ADP_ribosyl_GH, ADP-ribosylglycohydrolase. This family includes enzymes that ADP-ribosylations, for example ADP-ribosylarginine hydrolase EC:3.2.2.19 cleaves ADP-ribose-L-arginine. The family also includes dinitrogenase reductase activating glycohydrolase. Most surprisingly the family also includes jellyfish crystallins, these proteins appear to have lost the presumed active site residues.	2.51281e-34
NZ_CP006003.1\|WP_046714592.1\|6997561_6999178_+\|alkaline-phosphatase-family-protein	gnl\|CDD\|293740	cd16016, AP-SPAP, SPAP is a subclass of alkaline phosphatase (AP). Alkaline phosphatases are non-specific phosphomonoesterases that catalyze the hydrolysis reaction via a phosphoseryl intermediate to produce inorganic phosphate and the corresponding alcohol, optimally at high pH. Alkaline phosphatase exists as a dimer, each monomer binding 2 zinc atoms and one magnesium atom, which are essential for enzymatic activity. Although SPAP is a subclass of alkaline phosphatase, SPAP has many differences from other APs: 1) the catalytic residue is a threonine instead of serine, 2) there is no binding pocket for the third metal ion, and 3) the arginine residue forming bidentate hydrogen bonding is deleted in SPAP. A lysine and an asparagine residue, recruited together for the first time into the active site, bind the substrate phosphoryl group in a manner not observed before in any other AP.	3.81622e-144
NZ_CP006003.1\|WP_046714595.1\|7000660_7001386_+\|transcriptional-regulator	gnl\|CDD\|225253	COG2378, COG2378, Predicted transcriptional regulator [Transcription].	6.82127e-31
NZ_CP006003.1\|WP_046714594.1\|6999815_7000577_-\|alpha/beta-hydrolase	gnl\|CDD\|184875	PRK14875, PRK14875, acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional.	5.89707e-23
NZ_CP006003.1\|WP_074955215.1\|7015128_7015485_-\|response-regulator	gnl\|CDD\|381103	cd17551, REC_RpfG-like, phosphoacceptor receiver (REC) domain of cyclic di-GMP phosphodiesterase response regulator RpfG and similar proteins. Cyclic di-GMP phosphodiesterase response regulator RpfG, together with sensory/regulatory protein RpfC, constitute a two-component system implicated in sensing and responding to the diffusible signal factor (DSF) that is essential for cell-cell signaling. RpfC is a hybrid sensor/histidine kinase that phosphorylates and activates RpfG, which degrades cyclic di-GMP to GMP, leading to the activation of Clp, a global transcriptional regulator that regulates a large set of genes in the DSF pathway. RpfG contains a CheY-like receiver domain attached to a histidine-aspartic acid-glycine-tyrosine-proline (HD-GYP) cyclic di-GMP phosphodiesterase domain. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	4.88564e-27
NZ_CP006003.1\|WP_046714591.1\|6997050_6997461_-\|acyl-CoA-thioesterase	gnl\|CDD\|223894	COG0824, FcbC, Predicted thioesterase [General function prediction only].	1.11735e-42
NZ_CP006003.1\|WP_046714602.1\|7013316_7014960_-\|chaperonin-GroEL	gnl\|CDD\|234573	PRK00013, groEL, chaperonin GroEL; Reviewed.	0
NZ_CP006003.1\|WP_046714605.1\|7016602_7017607_-\|epimerase	gnl\|CDD\|187540	cd05229, SDR_a3, atypical (a) SDRs, subgroup 3. These atypical SDR family members of unknown function have a glycine-rich NAD(P)-binding motif consensus that is very similar to the extended SDRs, GXXGXXG. Generally, this group has poor conservation of the active site tetrad, However, individual sequences do contain matches to the YXXXK active site motif, and generally Tyr or Asn in place of the upstream Ser found in most SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	7.21233e-113
NZ_CP006003.1\|WP_074955678.1\|7001389_7002244_-\|nicotinate-nucleotide-diphosphorylase-(carboxylating)	gnl\|CDD\|238806	cd01572, QPRTase, Quinolinate phosphoribosyl transferase (QAPRTase or QPRTase), also called nicotinate-nucleotide pyrophosphorylase, is involved in the de novo synthesis of NAD in both prokaryotes and eukaryotes. It catalyses the reaction of quinolinic acid (QA) with 5-phosphoribosyl-1-pyrophosphate (PRPP) in the presence of Mg2+ to produce nicotinic acid mononucleotide (NAMN), pyrophosphate and carbon dioxide. QPRTase functions as a homodimer with two active sites, each formed by the C-terminal region of one subunit and the N-terminal region of the other.	9.33378e-126
NZ_CP006003.1\|WP_046714598.1\|7007534_7008350_-\|defective-in-fruiting-DifE	gnl\|CDD\|366716	pfam01584, CheW, CheW-like domain. CheW proteins are part of the chemotaxis signaling mechanism in bacteria. CheW interacts with the methyl accepting chemotaxis proteins (MCPs) and relays signals to CheY, which affects flageller rotation. This family includes CheW and other related proteins that are involved in chemotaxis. The CheW-like regulatory domain in CheA binds to CheW, suggesting that these domains can interact with each other.	4.18615e-07
NZ_CP006003.1\|WP_046714599.1\|7009780_7010176_-\|ferritin	gnl\|CDD\|275328	TIGR04535, conserved_hypothetical_protein, ferritin-like protein. Two families of proteins are known to be encoded, with some regularity, next to the gene for encapsulin (pfam04454), with surrounds the target protein to form a prokaryotic proteinaceous organelle. One is the family of enzymes that includes Dyp-type peroxidases. The other is this family, with a resemblance to bacterioferritins. Encapsulin-associated forms of the proteins in these two families have a necessary C-terminal motif that resembles DGSL[SGN]IGSL[KR]. Members of this family that include the last columns of the model in the hit region (and are encoded next to the encapsulin gene) should be designated encapsulin-associated ferritin-like protein.	2.37389e-17

>NZ_CP006003.1|WP_046714596.1|7002282_7006071_-|valine--tRNA-ligase
MTDTTELSKAYEPTEVEARLYAFWLERDYFRAAATSDKPAFSIVLPPPNVTGSLHIGHALTATIQDILTRWKRMSGHNALWLPGTDHAGIATQMVVEKELKKTEGKSRHDLGREKFLERVWTWKGKYGARIGEQHRYLGASLDWSRERFTMDDQSSAAVREVFVRLYEEGLMYRAQKLINWCPSCRTALSDLEVEHEEKNGSIWHIRYPIKDSERTLTVATTRPETMLGDTAVAIHPEDERYLGLAGQQVVLPLTGREIPIIADAELVDPKFGTGVVKVTPAHDFNDYQTGLRHKLPMLTILDEAARMTKDTGKYAGMDRFDARKAVLADLQEQGLLEKEEPHKLNVGTCQRCVSVVEPRLSPQWFIKIEPLARPAIEAVEQGRTKFVPESWTNTYFHWMRNIHDWCVSRQLWWGHQIPAYYCTSCSPRQGDDTDLPLDAPTVKVGGVDFARAEPIVSRGTPESCPKCGGKSFIQDSDVLDTWFSSALWPFSTLGWPQDTAELKTFYPTSVMETGHDIIFFWVARMMMMGLHFMGDVPFRTVYLHAMVRDEKGEKMSKVKGNVIDPLDVILGAKPEQLNATLKNKFPQGMPAFGADALRFTLASLTQQGRDIKLSMDRLAGYKAFCNKLWNASRFALMNMGGGYQYDGRSPKELPLTLADRWILSRLQRATTEARASLEVYGFAEAASTLYQFLWAELCDWYIELSKPSLYGDDATAKDTTRAVLVYALDRVLRLMHPFMPFITEEIWQKLPMSRPTESIMIASYPEPDAALVDEAAESEMAPVIAAIEGLRTIRGESNLPPATKLKAVVQSPDARTRELLERWRGYLLPLAGLSDVQVGPPGAKPPQAAAFVATNLEIYVPLAGLIDLDAERDRLRKEIARAEQEAASVLRKLDNPNFVAKAPPDVVEKDRARVEELKERKAKLEDHLQRIAPEPSMPENLPSESTTSPDEESASPSEPAQVKVAPSKQETGGVDLGQELKGEMEGDEGQVPQTDPQVQDALAKLREGTKEGLSPSDHHDLGVAYMSMGLVDDAMREFGKAKEGGDGREAPADAPKAEKKPKKAKAQADDGAPSATTFPPPTEAPVAKKAPAKKPAAPKPPPPGGVSAKKAGADVAPPGAELVVKAPAKKAPAKPADTAPAKKAGAKSAGKAPAKKAGAKSTGKAAAKKAGAKSTGKAAKKATGKAAAKKGATAKKSAGKASAKKAVGKAAKKGATAKKAPAKSAGKKTGGKATVKKASARKAAAKKVTRAKPSARAKARR
>NZ_CP006003.1|WP_074955678.1|7001389_7002244_-|nicotinate-nucleotide-diphosphorylase-(carboxylating)
MDLALDEDLGAAGDVTSQALIPPDAEGSAELVAKEQLVLAGLEAFTRVFHKVDPDVEVELVRQDGQEIKPKVVAARCHGRLRSLLAAERTALNLVQRAAGIATLAQQAMTSVRGSKMQVLDTRKTPPGMRVLAKDAVRMGGATNHRFGLFDGVLIKDNHIAAVGGSISEALKRAKANGPRLCKIEIEVTNLKQLAEALEGGADVVMLDNMDDAQIREAVKLAGGRVPLEVSGGVTLDRLPRLAKMGVDFVSMGALTHSARAMDLSLEITSTKKPRRPRATPTQG
>NZ_CP006003.1|WP_046714595.1|7000660_7001386_+|transcriptional-regulator
MTRVSRVMRLVDFLRGREATTVGEIASALEVSERTVHRDLATLREQGLPIASDTGPGGGVRLERDRGVTAVHLSVEEVVSLWLMASLSSTGSALPWGDAARSGLDKLFASVPRERARSMRELCRRVVVGKPATERVLAELGTPPRELLAVFEQAFREQVCLSFDYVDRHGKKSRRCVEPHGLLVEAPVWYVLARDVEKSAARMFRMDRIQRPRRVPGRHFTPDMEGLQAQALAQKGKGPEQ
>NZ_CP006003.1|WP_046714594.1|6999815_7000577_-|alpha/beta-hydrolase
MKGTAGELYVDDGGVGGLPVVFVHSSAGSTKHWRAQLEHLRTSRRALALDLRGHGRSELTQATDATVEDFASDVAAVVDGLKLERFVLVGHSLGGAVCAAYAAANPSRVAGLLLLDPASDGRQIPAEQAQGLMAVLASDAWLSVVEEYWAPMLAPSSEDVRAQVLGGLRATPQRAVRSGLGALLTFDPVTALRAYPGPKLSVVTAHNQGPDAYQHLVSELPSLEVEPVIGHWLQLDAPVWVNGVLDRFLATTR
>NZ_CP006003.1|WP_046714593.1|6999193_6999664_-|hypothetical-protein
MIKFPKKPGARGLPDIPPKASVPARPPDPKPLTPTPARAIASAKDAFHPTASVPRTGFAASQARLSVLTTKKSELELQAQHILQSRNQLSHLIGVLSNLAAKHPPGSREGRTLESRIANIQQVDKAFELQLQQLSTQRQSVDAELDAVQKLIAKNP
>NZ_CP006003.1|WP_046714592.1|6997561_6999178_+|alkaline-phosphatase-family-protein
MIRALVLTSVLASLPAAARPPRLTLLITVDALGSDVLLRNRPRLQGGLGQLLDSGAYFPYARYGYAKCRTAPGHTTLATGANPWRHGIVDNRWWERASGKLVYAFVDPAHPVLEAVSKPGQDASPVNLMAETLSDRLRMATQQRGKAVSLSLKSRAAIAMAGRLGQAWWFDEGSGKFVTGTWYAKEFPQWLQQLNARKIPDRYFGKTWELSRPRAEYVGEDDLPHEADSYGLGRVFPHPLTGGLKAPGTDFYKAFGVSPDSHEFLVEAAKAAIAGEGLGKDAVPDLLSVSFSGTDNVFHEYGPYSWEMQDTVLRLDKALGELISAAERAAGGRANLSIALVADHGGAAAPEEWAAAGLPAQRMHPKAISEGITAMVKERFGPDVTVAMEELDVYLGGPALTSGKVDGAQVRRAVVDWLMKQPIVVAAVTREELFSAPDPAGHLATLRKGYYPGRSGDVLYMLAPFQVVYYDAQGSTHGSPYSYDSQVPVVFAGKGVKPGTYMTELDPVDVAPTLAALMEMGMPASTEGKPRAEILTGK
>NZ_CP006003.1|WP_046714591.1|6997050_6997461_-|acyl-CoA-thioesterase
MVEARLRVIYGDTDQMGVVYYANYFRYFEFARSEFFRARGGSYRELEGSGLMLPVAEASCAYKAPARYDDVLVIRASVSELRRASVVFTYELFREGEPRTLLCTGRTLHACVGRDGKPTRLPESVARLLENPNAGP
>NZ_CP006003.1|WP_046714590.1|6996068_6997037_-|fructose-bisphosphatase-class-II
MDRNLAMEVVRVTEMAAIASARLMGRGDKNESDQAAVDAMRRAFDALHIDGTIVIGEGERDEAPMLYIGEKVGRRADGDPAVDIALDPLEGTNLCAYGRPGSITVVAMASKGGLLNAPDTYMEKLAVGPRARGAIDLRKSATENLRTIAEKMKVYVSDLTVVVLDRERHQDLIKEIRAAGARIRLIEDGDVAGAIATCFEGTGVDVLMGTGGAPEGVIAAAAIRATGGDMQGRLVPRNPGEIERAKKMGITDMSKIYAAEELARGEVMFAATGVTSGDFLKGVRFFGGGCETHSVVMRSKTSTVRFIQSLHKFDKKPGYASI
>NZ_CP006003.1|WP_046714589.1|6995609_6996035_-|SRPBCC-family-protein
MPGATRTIVINAPIEKVFDVITQYERYPEFLPEVKEIRTANRKGDTVDVHYKVDVMKTVRYSIRVVEERPRRMAWTFIEGEVMKDNKGSWLLEAEGEGKTRATYNVEMALGLLVPKAVVNALVDTSLPKMLDAFKKRAEAP
>NZ_CP006003.1|WP_046714588.1|6993853_6994921_+|ADP-ribosylglycohydrolase-family-protein
MPPPRRRNAPQGPDPLLAQRRRGALLGLAVGNALAVPTAHRPLHAPAFPTLADGLYTAMSGGGPQQLRKGQVTEEVHLACALGHSLRDFKRYDAADALRRYRAWQPHAFDVSEPLKEVFEECQSGLPPLGAGRRVWLRGHRKAVGAGSLARVAPLGVYLASDPKARTQASLEDSALTHYDPRCQLACAGLTAAIAKAVTSGAELKLEDVLTAAESGLLLAGAALGRSAPDYVQEVAFAQQLLREDLARARDDDPRLYGPELHVHRAQHAIHVAFRLAFWELLHAPTAQAALIDVIHRGGDTEVHGAVTGALVGAFHGEEALPAEWRKHVLEALSTQKGPLWDVYHPRHLLGLVAT
>NZ_CP006003.1|WP_046714598.1|7007534_7008350_-|defective-in-fruiting-DifE
MSPFESGRRLCLLVEAGETRYAVEATSVMEVAMPGGNGSNLRGVLEVKDLAALLGGAPEPDAGMVVVLDVSPTLAVRVRSVVEVADVARAPFFLLPPGLADSLAPLSRGAVLHKERLYLELIAEALPHRVGPRSTPAPPRPVHWAESVPERALVFESQGRLFGMPLAFVSQVVERGEAFSVLPVQSGPVAGIFPHAQVLWPICSVPALLGTPPAPEPFFLLAELAGRHVGLTATRVLGVLQRFEPDETAGTFRVPGLAEPVLFLDLQRMFS
>NZ_CP006003.1|WP_046718180.1|7008400_7009777_+|diguanylate-cyclase-response-regulator
MARILLVDDEKIARTLYGDYLTAVGHTVTAVATFLEARQALAADRFDAVVTDLILPGGDGMEVLRHVRERHPGVEVVVITGLDKVDPAVRAIKSGAAEYLVKPVAPEALQHAVRRALTTRELMQENASLRRHVALLEAGQRLATTLDREKLAVATTSALETMAHANGIVLLERDANLGLRAQGTRGLPEGTEEALVAWLREQLLHGKAPGDAEMLDVPFQRVSSFPAIESNTVLGHAVLFYSDARATDGGAEAAGYLVRNWALALRNLDRFAAVEDLAYVDDLTRLFNTRYLHMVLDREVQASIQTQRPFSLLFLDLDHFKSINDNHGHLVGSKLLVETARVVKGCVRDHDVVARYGGDEYVVLLRNTDSGGALKVAERIRRTMETHQFLAREGLSLKLSTCIGVASFPEHARDKATLLDLSDRAMYRGKRGTRNVVYMAAQDLEAPPAERRQGSSGT
>NZ_CP006003.1|WP_046714599.1|7009780_7010176_-|ferritin
MPQTDPFHSLVPRKMTDSELARSIRLNIEAELDAINLYAAHIDATDNEEAKAVLRHVMDEEREHAALFWQLIARLDPEQAQHAQEAVEKFKLIISGAPHESVEAVGKEGKGGAEAPEPSIVKRLTVGNMRP
>NZ_CP006003.1|WP_046714600.1|7010293_7011841_+|hybrid-sensor-histidine-kinase/response-regulator
MRGAARLRHALHMEIPAPLAQLLQALDAGDLPAARAAAAAFQRSGLHSTQLAAEVLHELRQPLLGVKAYAQLLAEDRGPTGPLRLLMSQVERMEQIVSDYIRLASERPAPQQRLSLAAPIWAAARLFSVNPDSARISLEVEAPEDIFAQGNARLIEQLTLNLLNNARDAMSGRGRVKVVLTREGSAPVLYVADWGPGIPDELKERIFEPYVTASKRGTGLGLSVCRRIAQEHHARIDLAPQGAIRDVPPPATVFRVLFPATEAAPGRRKRLLVVDDETIIRMVFRDLMSKECEVIEAASGEEALDLLREAPVDLIVTDKNLPGLSGLELAQQARRLSATSRVILMTGYPSLVTTQQALELGVVDYLLKPFDDIREVRNLLRATLAAPPAQPGAATQVKRVDVLEDNPTTAAQIAEALELVGLEARILPTSELIALEQPAGVVVSWDFSPAYGRKALELGKALAQGAPFVVLAEHLTMETALESLRAGAAACLPKLLSDTTALSRELSRAFKKGVP
>NZ_CP006003.1|WP_046714601.1|7011837_7013016_+|hypothetical-protein
MRLALLSVLLLGVACSSDKPPVQGEPDASGPVDSGSDAGSDAGSDDDGGAGADDGGSTGDGGAGTPDAGSGEEDAGSCEPPAAVRESLLVPGLNNPRRLAADTTDIYIAESHSLRPNQTEGSGQILRVPKAGGDVVTVAKGFFVPNAIAVNAQFLFVLDETGLWRVDKATGARGTVPIEASVPDVISSGTDVRIGRLAGRDYVVVATGARRLVRVDATGSASSSLVLYEGPAGTQVRGARIDGTDVWFLVTGNTEPGLYRVPLDLETPAARVNASITSGTSLELTPTRFLITEGGGGTGRVLALPRAGGEARVLADGLQGPLFPVELHGAVYFKESVAGDAGFLRRVRGCPANTTDSVGPVGTGPGGLIVDGDTLLFTSQESGTGGAVGRVP
>NZ_CP006003.1|WP_046714602.1|7013316_7014960_-|chaperonin-GroEL
MAAKEIFFHQSAREAILRGVRTLADAVAVTLGPKGRNVVIEKSFGSPTVTKDGVTVAKEIDLENKFENMGAQMVKEVASKTSDKAGDGTTTATVLARAIYEEGLKLVAAGHSPMDLKRGIDKAVEVVVEELKKISKPTSDKKAIAQVGTISANGDETIGTIIADAMEKVGKEGVITVEEAKGLETTLDVVEGMQFDRGYVSPYFVTNRERMEVVVDDPYILISEKKISSMQDMIPILEQVARSGKPLLIIADDIEGEALATLVVNKIRGVLNVAAVKAPGFGDRRKEMLKDIATLTGGMVVSEELGHTYEKLTLAELGRAKRITVDKDNTTIVDGNGKKEEIEGRIKLIRGQIDAVTSDYDREKLQERLAKLVGGVAVINVGAATEVEMKEKKARVEDALHATRAAVEEGIVPGGGVAYLRTLNALEALKPGGEQNFGVEIIRRALQEPLRKIASNAGVEGAVVINKVREGKGAFGYNARTDTYEDLEKAGVIDPTKVERTALQNAASVASLLLTTEAMVAERPKGKSKAGGAGGGMPDYGGDDMEY
>NZ_CP006003.1|WP_074955215.1|7015128_7015485_-|response-regulator
MNILVVDDDLELCTLLSRFLEMHGYTVYSASDALQALDIMERNEVGMVITDYIMPHLDGIAFTEMLKADPRFQAIPVLLMTASTDGNVTEKGLRKGVALTLNKPLDMGQLLTLVRFAE
>NZ_CP006003.1|WP_046714604.1|7015575_7016649_+|tetratricopeptide-repeat-domain-protein
MEKRTGKASGSGDPRVRLEAVADAFEAGDFEGALGQVEGLLSDAPELPEALHYRAAALTELGRLEEAGRAFGLALKAAPEDLEILLGAADCLVCRAGEDREAVEEGLELCARGKRLAQREQDVEMLYEFLLLEGMGLNQMGECEQALVSLDAALGHMPRSVDARLERGIALFELCRFDDARGAFEAVLKDMPDEPWAHHYLGLMAERRGDEKEAKKRFARAQALVPEEFPPPVALGEAEFDRAVEDAVKALPQHAKQYLDNVTIAVEDIPSDEDLLGQDPPLSPSILGVFRGTPVGERSVTSAYDHLTASIVLYQKNLERFAKTREELIEQIGITVMHEVGHLMGLDEDDLWQRGLD
>NZ_CP006003.1|WP_046714605.1|7016602_7017607_-|epimerase
MAGKVALFGASGVIGQSVANALKAEGRPYRVVGRSRGSLESEFGADRLAEVVTWNPDDPASVRDAARGVDTLIYMVGVNYWQFHLHPQVMRKMLDGAIAEGVKHVVLIGTVYPYGLPRTTPVRDDHPREPNSFKGRMRKEQEDLLLAEHAAGRIQATILRLPDFYGPHVERSFLHRAFVAALAGKRAQLIGPIDAPHEFIFVPDVGPIVLKLMDEPRAYGRSWNLAGAGVTTQRQMIEETYRQLGRPAKVLTMGKGMLRFIGLFDPFMRELVEMHYLLTTPVLMDDSELRHLLGNVPKTPYAEGIRQTLAAMKQPRSVTVSPAPVATGRPRPTP
>NZ_CP006003.1|WP_046714606.1|7017712_7018351_+|TetR/AcrR-family-transcriptional-regulator
MGISERKERQRAELREHILRVAREMVVKEGFAALSMRKLADAVEYAPATLYLHFESREAIARELCIRGFEEFLAKLEPAAVEPEPLARLKVMAAAYVAFGLEHPETYRLIFMEDPKLSAELFQGTPDGGGPRSFGLLASVFVDLQTAGRLAPEAQPARLAEMLWAGLHGIVSLKLTCAAFKETTAEMLRDTLLVTLVHGLPGLKPARGARAR

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Crispr_ID: NZ_CP006003_24

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP006003_24

8394972-8395067

Orphan

Consensus_repeat	Method
CGCCGACGACGTCTTCGCGCGAGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP006003_24

>merge|NZ_CP006003|24|8394972-8395067|CRISPRCasFinder
CGCCGACGACGTCTTCGCGCGAGCGCCCGAAGCCCTCCTGCGCGACGCCCCCCGCGACATTCCCCGAACCCACGCCGACGACGTCCTCGCGCGAGC

>NZ_CP006003|24|22|8394972-8395067|CRISPRCasFinder
CGCCGACGACGTCTTCGCGCGAGC	GCCCGAAGCCCTCCTGCGCGACGCCCCCCGCGACATTCCCCGAACCCA
CGCCGACGACGTCCTCGCGCGAGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP006003.1\|WP_046715480.1\|8400414_8401158_-\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	unknown	unknown	gnl\|CDD\|153251
NZ_CP006003.1\|WP_082165374.1\|8388823_8390134_+\|class-I-SAM-dependent-rRNA-methyltransferase	unknown	unknown	gnl\|CDD\|224017
NZ_CP006003.1\|WP_052771471.1\|8397974_8398478_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046715472.1\|8390164_8390659_+\|YkgJ-family-cysteine-cluster-protein	unknown	unknown	gnl\|CDD\|308985
NZ_CP006003.1\|WP_046715470.1\|8388274_8388793_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046715483.1\|8403995_8405039_-\|antifreeze-protein	unknown	unknown	gnl\|CDD\|259806
NZ_CP006003.1\|WP_046715475.1\|8393128_8394574_-\|nicotinate-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|224405
NZ_CP006003.1\|WP_046715466.1\|8384245_8385355_-\|cytochrome-c-peroxidase	unknown	unknown	gnl\|CDD\|224771
NZ_CP006003.1\|WP_046715482.1\|8402189_8403917_+\|chromosome-segregation-protein-SMC	unknown	unknown	gnl\|CDD\|341049
NZ_CP006003.1\|WP_046715484.1\|8405256_8406057_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|372253
NZ_CP006003.1\|WP_046715485.1\|8406059_8406977_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP006003.1\|WP_046715467.1\|8385579_8386410_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182705
NZ_CP006003.1\|WP_046715474.1\|8392147_8393119_-\|nicotinamidase	unknown	unknown	gnl\|CDD\|238493
NZ_CP006003.1\|WP_046715477.1\|8396169_8397924_-\|TIGR02996-domain-containing-protein	unknown	unknown	gnl\|CDD\|238064
NZ_CP006003.1\|WP_046715473.1\|8390902_8392021_+\|glycerate-kinase	unknown	unknown	gnl\|CDD\|376844
NZ_CP006003.1\|WP_046715469.1\|8387642_8388197_-\|exclusion-protein-FxsA	unknown	unknown	gnl\|CDD\|377238
NZ_CP006003.1\|WP_046715468.1\|8386466_8387633_+\|acyltransferase	unknown	unknown	gnl\|CDD\|376607
NZ_CP006003.1\|WP_046715478.1\|8398601_8399672_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046715481.1\|8401154_8402159_-\|EF-P-lysine-aminoacylase-GenX	unknown	unknown	gnl\|CDD\|273090
NZ_CP006003.1\|WP_046715479.1\|8399725_8400418_-\|inorganic-pyrophosphatase	unknown	unknown	gnl\|CDD\|179080

Protein	Function_ID	Function_description	E-value
NZ_CP006003.1\|WP_046715480.1\|8400414_8401158_-\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	gnl\|CDD\|153251	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), Tafazzin (product of Barth syndrome gene), and similar proteins.	4.57731e-61
NZ_CP006003.1\|WP_082165374.1\|8388823_8390134_+\|class-I-SAM-dependent-rRNA-methyltransferase	gnl\|CDD\|224017	COG1092, COG1092, Predicted SAM-dependent methyltransferases [General function prediction only].	6.27869e-110
NZ_CP006003.1\|WP_046715479.1\|8399725_8400418_-\|inorganic-pyrophosphatase	gnl\|CDD\|179080	PRK00642, PRK00642, inorganic pyrophosphatase; Provisional.	5.44634e-125
NZ_CP006003.1\|WP_046715472.1\|8390164_8390659_+\|YkgJ-family-cysteine-cluster-protein	gnl\|CDD\|308985	pfam03692, CxxCxxCC, Putative zinc- or iron-chelating domain. This family of proteins contains 8 conserved cysteines. It has in the past been annotated as being one of the complex of proteins of the flagellar Fli complex. However this was due to a mis-annotation of the original Salmonella LT2 Genbank entry of 'fliB'. With all its conserved cysteines it is possibly a domain that chelates iron or zinc ions.	0.000127229
NZ_CP006003.1\|WP_046715483.1\|8403995_8405039_-\|antifreeze-protein	gnl\|CDD\|259806	cd03408, SPFH_like_u1, Uncharacterized family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily. This model summarizes an uncharacterized family of proteins similar to stomatin, prohibitin, flotillin, HflK/C (SPFH) and podocin. The conserved domain common to the SPFH superfamily has also been referred to as the Band 7 domain. Many superfamily members are associated with lipid rafts. Individual proteins of the SPFH superfamily may cluster to form membrane microdomains which may in turn recruit multiprotein complexes. Microdomains formed from flotillin proteins may in addition be dynamic units with their own regulatory functions. Flotillins have been implicated in signal transduction, vesicle trafficking, cytoskeleton rearrangement and are known to interact with a variety of proteins. Stomatin interacts with and regulates members of the degenerin/epithelia Na+ channel family in mechanosensory cells of Caenorhabditis elegans and vertebrate neurons and participates in trafficking of Glut1 glucose transporters. Prohibitin may act as a chaperone for the stabilization of mitochondrial proteins. Prokaryotic HflK/C plays a role in the decision between lysogenic and lytic cycle growth during lambda phage infection. Flotillins have been implicated in the progression of prion disease, in the pathogenesis of neurodegenerative diseases such as Parkinson's and Alzheimer's disease and, in cancer invasion and metastasis. Mutations in the podocin gene give rise to autosomal recessive steroid resistant nephritic syndrome.	2.75732e-55
NZ_CP006003.1\|WP_046715475.1\|8393128_8394574_-\|nicotinate-phosphoribosyltransferase	gnl\|CDD\|224405	COG1488, PncB, Nicotinic acid phosphoribosyltransferase [Coenzyme metabolism].	1.4219e-32
NZ_CP006003.1\|WP_046715466.1\|8384245_8385355_-\|cytochrome-c-peroxidase	gnl\|CDD\|224771	COG1858, MauG, Cytochrome c peroxidase [Inorganic ion transport and metabolism].	3.34074e-101
NZ_CP006003.1\|WP_046715482.1\|8402189_8403917_+\|chromosome-segregation-protein-SMC	gnl\|CDD\|341049	cd06258, M3_like, M3-like Peptidases, zincin metallopeptidases, include M2_ACE, M3A, M3B_PepF, and M32 families. The peptidase M3-like family, also called neurolysin-like family, is part of the "zincin" metallopeptidases, and includes the M2, M3 and M32 families of metallopeptidases. The M2 angiotensin converting enzyme (ACE, EC 3.4.15.1) is a membrane-bound, zinc-dependent dipeptidase that catalyzes the conversion of the decapeptide angiotensin I to the potent vasopressor octapeptide angiotensin II. The M3 family is subdivided into two subfamilies: the widespread M3A, which comprises a number of high-molecular mass endo- and exopeptidases from bacteria, archaea, protozoa, fungi, plants and animals, and the small M3B, whose members are enzymes primarily from bacteria. Well-known mammalian/eukaryotic M3A endopeptidases are the thimet oligopeptidase (TOP; endopeptidase 3.4.24.15), neurolysin (alias endopeptidase 3.4.24.16), and the mitochondrial intermediate peptidase. The first two are intracellular oligopeptidases, which act only on relatively short substrates of less than 20 amino acid residues, while the latter cleaves N-terminal octapeptides from proteins during their import into the mitochondria. The M3A subfamily also contains several bacterial endopeptidases, called oligopeptidases A, as well as a large number of bacterial carboxypeptidases, called dipeptidyl peptidases (Dcp; Dcp II; peptidyl dipeptidase; EC 3.4.15.5). M3B subfamily consists of oligopeptidase F (PepF) which hydrolyzes peptides containing 7-17 amino acid residues with fairly broad specificity. Peptidases in the M3 family contain the HEXXH motif that forms part of the active site in conjunction with a C-terminally-located Glutamic acid (Glu) residue. A single zinc ion is ligated by the side-chains of the two Histidine (His) residues, and the more C-terminal Glu. Most of the peptidases are synthesized without signal peptides or propeptides, and function intracellularly. There are similarities to the thermostable carboxypeptidases from Pyrococcus furiosus carboxypeptidase (PfuCP), and Thermus aquaticus (TaqCP), belonging to peptidase family M32. Little is known about function of this family, including carboxypeptidases Taq and Pfu.	0.0011721
NZ_CP006003.1\|WP_046715484.1\|8405256_8406057_-\|ABC-transporter-permease	gnl\|CDD\|372253	pfam12679, ABC2_membrane_2, ABC-2 family transporter protein. This family is related to the ABC-2 membrane transporter family.	6.0295e-10
NZ_CP006003.1\|WP_046715467.1\|8385579_8386410_-\|hypothetical-protein	gnl\|CDD\|182705	PRK10759, PRK10759, YfiM family lipoprotein.	8.87943e-13
NZ_CP006003.1\|WP_046715474.1\|8392147_8393119_-\|nicotinamidase	gnl\|CDD\|238493	cd01011, nicotinamidase, Nicotinamidase/pyrazinamidase (PZase). Nicotinamidase, a ubiquitous enzyme in prokaryotes, converts nicotinamide to nicotinic acid (niacin) and ammonia, which in turn can be recycled to make nicotinamide adenine dinucleotide (NAD). The same enzyme is also called pyrazinamidase, because in converts the tuberculosis drug pyrazinamide (PZA) into its active form pyrazinoic acid (POA).	0.00068202
NZ_CP006003.1\|WP_046715477.1\|8396169_8397924_-\|TIGR02996-domain-containing-protein	gnl\|CDD\|238064	cd00116, LRR_RI, Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).	1.04481e-24
NZ_CP006003.1\|WP_046715473.1\|8390902_8392021_+\|glycerate-kinase	gnl\|CDD\|376844	pfam02595, Gly_kinase, Glycerate kinase family. This is family of Glycerate kinases.	4.20485e-146
NZ_CP006003.1\|WP_046715469.1\|8387642_8388197_-\|exclusion-protein-FxsA	gnl\|CDD\|377238	pfam04186, FxsA, FxsA cytoplasmic membrane protein. This is a bacterial family of cytoplasmic membrane proteins. It includes two transmembrane regions. The molecular function of FxsA is unknown, but in Escherichia coli its over-expression has been shown to alleviate the exclusion of phage T7 in those cells with an F plasmid.	3.63898e-37
NZ_CP006003.1\|WP_046715468.1\|8386466_8387633_+\|acyltransferase	gnl\|CDD\|376607	pfam01757, Acyl_transf_3, Acyltransferase family. This family includes a range of acyltransferase enzymes. This domain is found in many as yet uncharacterized C. elegans proteins and it is approximately 300 amino acids long.	1.39149e-16
NZ_CP006003.1\|WP_046715481.1\|8401154_8402159_-\|EF-P-lysine-aminoacylase-GenX	gnl\|CDD\|273090	TIGR00462, genX, EF-P lysine aminoacylase GenX. Many Gram-negative bacteria have a protein closely homologous to the C-terminal region of lysyl-tRNA synthetase (LysS). Multiple sequence alignment of these proteins with the homologous regions of collected LysS proteins shows that these proteins form a distinct set rather than just similar truncations of LysS. The protein is termed GenX after its designation in E. coli. Interestingly, genX often is located near a homolog of lysine-2,3-aminomutase. Its function is unknown. [Unknown function, General].	2.72725e-143
NZ_CP006003.1\|WP_046715485.1\|8406059_8406977_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	7.79532e-95

>NZ_CP006003.1|WP_046715475.1|8393128_8394574_-|nicotinate-phosphoribosyltransferase
MATSLLATDGYKFSMAEAGWPLRRETFYYSHRKGGLQVMPLDLAAYVRALLPEPTPEDYDFLAKYDYEMGVGFKAAILRKEKLSVRAIPRGACFFPREPILTVTGPSALVSWVEPLLLQLNFRIQVATQALTDREGLARALARVTCDEQKAIALETLDAVGVKQVPITVDTEGYLQRVRATVKELIDAVEDPARIFEVGLRAATCQQQHELALQACKDVGVTRTSNVEGARKLGMIPVGTMGHEHIQRFGSDDAAFRAMRERRPQRSSYLLDTFDTLTSGIPAAFQLIREEPGAGDSIRFDSGNKKLQYLYAVTRARDIGIKPVNILEDGLDAEATREFEDLRRQVGWEPGSQFYGYGGHIVARTMECPFTRDKVAAIYKLSQTGPQPVMKFGNELAEGKQSIPGTPVLFRRRHGSGPIGLVGQEGEPVPDGYFPLMEAEPETPSLVGALEVNSEPAKIAQTQATRALVEELTRKHFPKGR
>NZ_CP006003.1|WP_046715474.1|8392147_8393119_-|nicotinamidase
MTLPIPRFHEDARAGQLYLERTGEVAEEALRYAAEHRVRPASEDRVRIAAFGIDVQVAFCTPGASLFVPGAVEDTQRTLRWLYTNLGRVTELVFSLDTHRVFQIFHPAWWRDAEGKPPPPLTSITAADVRAGRWRATRFEAESLEYCERLEARGRYVHTIWPYHALLGGLSHALVPAFYEASAFHALVRDTPTHFELKGEHPLTENYSVLSPDVTEVKGQRVGEFNTRLFERLMTFDRVYVFGQAKSHCVLSTLRDLREHIERTDRSRMGRVHILVDAMSPVPAPPLNPLPPALDFPRMADAAIEELRAAGMRVVRTTDPLEG
>NZ_CP006003.1|WP_046715473.1|8390902_8392021_+|glycerate-kinase
MIPPRWLVAPQEYKGTLTASEAAEAMARGVREVSPEVVLDLAPLADGGPGTVEALLAGTRGERRVCRVHCPLGKPMEAAWALLEDGRTAVVEMAAASGLVHLEPNPVSARKASTYGAGELMRAALDSGCERLIIGLGGSATTDGGTGALTALGYRFLDANGHPLPPGGAALSVLARVDASGRHPRLGKVELMGATDVTSPLLGADGAARLFGPQKGADAAGVEELEAALAHYSRVVGDLSAGWPGTGAAGGFGFGLVALAGARLVPGYELVSRALGLERRVLLAEVVLTGEGRFDRQTSLGKGPGGLARLAREHGTPVELFAGSVRRDEGVELDLFHTVVDLSTQARPGAPAAEVLQEAVARWTAARLKTAR
>NZ_CP006003.1|WP_046715472.1|8390164_8390659_+|YkgJ-family-cysteine-cluster-protein
MRTRDWDDEEEAPATRGSHQKERALKEVRAIFRQADAAYGPFSCPASGECCQLSRTGRQPWLWLPEWELLTQGRPLPPPREDGGCPYLDAAGKRCTVYADRPFGCRTFFCERIRGPARQPAETVGALLERLERVSQQREPSLRAPRPLLEWHAEALARASTKTP
>NZ_CP006003.1|WP_082165374.1|8388823_8390134_+|class-I-SAM-dependent-rRNA-methyltransferase
MPTSSKPPSGPHRGGRPSSPPSGQGRGRPHHRPEKVAPDRTEPELGPDGLPQVSLLRRGVDRWQAGHPWIYRADLNGDPGLQGGEVVRVTDGRGWFIGKAFYSRQSKISLRWLSFDDVAVDEDFFRQRLLSAQALRQRALPGETTYRLVHGEADGIPGLVVDRYGDYLSVQFLVPATEQRKALIADLLEAQFKPRGIVNRSDVSVRNLEGLTPEKGLLRGELPQGPISFDEGMVRVRADLLDGQKTGAFLDQKENHIMAAQYAAGEALDCFSYVGGFALQLATRAQSVTAVEISDQASAQLRENAQANKLSNVNVVAANAFDFLRDAVDDGKKFDTIVLDPPSFAKNKDAFAAAVRGYKEINLRAMQLLRPGGHLITASCTYHVDEQAFEDMLASAAADAKRRMQIIERRGAGKDHPVLVNLRETRYLKCYVLRAM
>NZ_CP006003.1|WP_046715470.1|8388274_8388793_-|hypothetical-protein
MRYELLLQTKTPGTPYEAARVDVLLSERRVSARPDGSRLWHFEHGDVEVGELREGGRVVATELRIPLTEQTELVREVVAEAAAIAAAAGARLVDPQLGRSLSATEAHVVVDQYLRTVRYDGSMSVGSMSFTPATSESSRGFQPGAKFFLIAIGAFFFLYLLVDSMIGSLGGR
>NZ_CP006003.1|WP_046715469.1|8387642_8388197_-|exclusion-protein-FxsA
MFKYFLLALTLPFVELYLLVAIGREVGFLPTLSVVLLTGLVGSWLARREGSRVMRRWRDALATRQVPEEGLFSGALVMLGGLLLLVPGFLTDVVGLSLLLPPVRRFVTARLRRAVERRMRDGSFQVTTMGGMGFPGPFPGEPRGGAPFPESWSDTAPKGPPGRIRSGASRAEVDAEFTEDEPRH
>NZ_CP006003.1|WP_046715468.1|8386466_8387633_+|acyltransferase
MTSPVVRFRDEASTSSYAPGRVKRLGPSFTFQQQSNRHPGLDGARGLAVLAMVLGHTLDALLSAEARLLPWVQHYWAFRGVTAPLFLLVSGWAVVAALGTRPNAARDTLGRRVRRSLLLLFLGYFLHWPGWHAVRDLGWTDAMVSHVLTFDALQCIGFALLVGSVLLALVPAQGGRPLVLLVLAVGIPLVSATVWKLGVGLPGAVQQFLGSAAGSRFPFFPWAGYFFAGAFAAYALHLLRPGWPQGLALLALGAGLLGLTRMTTADWTPASAWLVAYRVGQGLLVLGAVNLAPVRLSRLLAPFGRLSLWIYVLHLPVVYGWADIAGLAGRIGPRLGVTVAVGIGVALLVTCAVVAWLGRWVMEQARPWRAGSTTLNASLSGTRMSPRV
>NZ_CP006003.1|WP_046715467.1|8385579_8386410_-|hypothetical-protein
MKLSNRSGFVPCLIALLGSPVASAASGDDWLGPDKPKHFAACFVLAGVGYGAGALLLEPPEARFWTGAGLAMGVGVGKELYDLGRGTTFSFKDLAWDAAGTATGLGVSWLVDRLLFGPTPSPNARGSLRAAWPVVLIPGTRGGQEVLVGTRAGLHEAQEGLSLQQRLHRHQGAALFGVAPRDEHGDLAARTLAQTAGGHDADFLGEPSVGERALEPAWQLDAAPAARAAHQALAADEDIDVPVRVSTVFIPHPSSESSSRGAPGFPHPVDAPLRGR
>NZ_CP006003.1|WP_046715466.1|8384245_8385355_-|cytochrome-c-peroxidase
MSRTRFVTLLTLTSLGALSGCERKQEPVAPPAPPTTASAPKPPGPKPMTPEQLSHFFRPTPPAKNAKPAPQDTEAQVALGRMLFFEPRLSKNHDVSCNTCHGLDTYGVDNKALSDGHRGQKGSRNSPTVYNAAGHIAQFWDGRADTLEAQASGPILNPVEMAMPDERRVVATLSSMPEYVTRFREAFPSEKKPVSLANAARAIAAFERGLTTPSRFDQYLAGQHSALNEAEQRGLHLFVVTGCTTCHNGPAVGGTSFQKLGLIEDYPGLKDAGRFDATKNEDDRGKFRVPTLRNVEHTGPYLHDGSVDELPTMVRLMAKHQLARTLTDAEVEDLVAFLKSLTGELPPREHIAAPPLPPSTKKTPEPDPS
>NZ_CP006003.1|WP_046715477.1|8396169_8397924_-|TIGR02996-domain-containing-protein
MEHSFEDITAIRDQPDDDAPRLALARELMARGDPRGEFIDMQCALERFKEDLEVRDTLRERTQALLAEHEAQWLKPLGLRSREVRWSRGFIHEVWLTPERLGAVEHALLRGAPLRTLHLRGLEGSAAKLERALASPLMEVVTVLDLNQEGLGPDAAEVFTRIPSLTRLRKLRLTYNHLGFEGARALASAPCLGGLTHLDLHDNEVGPGGTRAIVKSPHFVHLHVLALGSSGAGEVDEQMLFGDDGAHVLARATHLSHLRGLYLESSGLTDKGAWMLAQAPHLAELRTLSMPNNQVGRAGIRALVERVSRLEALKIGSNRLGLAGMRAVTGGLSRLGKLDMGDNGPGGAKALWESPRMTELRYLRLSDGQVGDDGARMLASSPHLSRLTTLELHANGIGSEGARALANAPPLAGLTSLNLSDNFLGDEGARALGTASCLHQLSTLNLSLTRLGGEGVRALVSGPHLRNLTELTLDYNPIGDDGARALADSTSLSRLNRLSLMRTGMTDAGLRALASARDLSRLKSLSVQGNTYTEAGVRALASAKWAVSLKNLALPPQWVRSLPAQGRPFLEELAHLMPHVRIPR
>NZ_CP006003.1|WP_052771471.1|8397974_8398478_-|hypothetical-protein
MRIRSWGLLSLLGLSTLAGARGLPGAFVPGWEHGPFVDAVEYLSSEEDFRAWFQLRANLRKNFDDICGDTFCEGDYSNIETVVFRCSVGQRSGVLGQCLWVFGGSYEHIDARSGAITTQARTWACTSPLVPGTTMEALLKALSGPEPMDAPLPGTSTTLYDGLVDCL
>NZ_CP006003.1|WP_046715478.1|8398601_8399672_+|hypothetical-protein
MPSPLRRVSEVLVSTLVTVSLGLLAGCGEGYSEDDPFGEAQRALLNGVGSTAARAALTKRWAPIHYQDVDVTGSHSLGGKSDFLTRVDFDGDWSGTNNWDNTGSRLLSAHAYQSVVETSSHWYLLYMFFHPRDWSDNIFDSEHENDGEGVLLVVQRDGSEYGALVGAVTVAHKDFFSFVPSGSPLGSGAESVDGTLSLASFEGVLHPMTAQEAKGHGLKAWPAYDIVGDGVKYFPSLTLAEQPASATAVDVRYKLLDLYGGEGLWQRRELSTLFSGWGTFRGDTSGGCGLVAGNCSSNSANAPWGWDDGNDGPVLRGEIATDPAKLAAHYFSPSSQFSRTYTFNPYQGIGTDPNQP
>NZ_CP006003.1|WP_046715479.1|8399725_8400418_-|inorganic-pyrophosphatase
MKKPAPQKSFASHPWHGITPGNDAPEVVTAYIEIVPTDAVKYELDKESGILMLDRPQRFSSQCPTLYGFIPQTYCDELVAKRCAERTGVRDIKGDGDPIDICVLTEKVVSNGNLLVRAVPVGGFRMVDGDEADDKIIAVLESDLVYGELQHIAQLPRPLLDRLKHYFLTYKQIPGEGKRSVEIAEVYDRPEALEVIRRSMKDYDRVYGNAPTTPVRSRARRPVARKSRAS
>NZ_CP006003.1|WP_046715480.1|8400414_8401158_-|1-acyl-sn-glycerol-3-phosphate-acyltransferase
MIRDIVRTAFAGVSAVGLTGAASSAISALSVAGAHREADKLLKLWAQGVLASAGVRHEAVGLEHIPTEGHVVFVCNHQSHYDAPLGLAYLEKHTRFVAKAELFKIPVFGSALRLAGNIPVVRSGSSQDRARLEEAVTALRERVSVLFYAEGTRSEDGRLRPFKKGAATLAIQAGVPVVPMAVSGTRLILPKGGRAVRWGQRVALAVGAPITTQGLTIQDREALTRQLEDAVAQLYSEACRRSGDVPT
>NZ_CP006003.1|WP_046715481.1|8401154_8402159_-|EF-P-lysine-aminoacylase-GenX
MPNLSQWRAARGRQALYSALRRFFAAEGYLEVETPLLIPTPGMEPHINAFEARFVPETNVGVERPLYLHTSPEYAMKRLLADGAGPLFQLCKVFRNGEVSTTHNPEFTMLEFYRPQADYHAIMADLEGALAEAGRSATEGEPGADPAFFTRTPYERLTVRDAVLRATGVDIRVHSDGPSLKRACEAIGVRTGDAESFDDVFFHLFLQRVETGLGFDRPTFLIEYPASMAALSRLKPGDSAVAERVELYAKGLELANGFSELTDPAEQRARLLEEQDLRRRLGRSVYALDERFLDAVGRMPPSAGIAVGLDRILMLLLGVQRISEVLLFPAHEFV
>NZ_CP006003.1|WP_046715482.1|8402189_8403917_+|chromosome-segregation-protein-SMC
MHPRIPLLLAVACCLCACHKAPPADNRPPPTEEQLLTTDVRSLASRAETLLEAQHRLVWVFWTEGRHVDVSGTYAGQEDLFTLDNIRKLDRLRQLTQDPREVRALTALHSHFAGEYLSHALAEHNDASANLEASLTFNLDGKELRYRDLERLLANERSGNRRKALYAAATPALERLNQTLRRKEEEAEKRVKELGFPSYEAFGSELRQADLGKLSVLAEEILQATQAPYRVVMERLAQRELNLAFKDITRADIPRLFRSREVEDAFPKGVSLKKAHETLAGMKLDLSTQKNVEIDERDLPKKNSRPLALAVRVPEDVRVSFKPGSGVLHQARVLHEFGHALHAAFTAETRFELARLGNPTVGEAYSSLFEDLLEDPVWLEEHAGLSGEERAKYLATSSAHKLYLIRHAAGRLLYQLELHRRADVDPRELYREIMSRTDDIPMMAEDTARYLVDQEDFFQSADSFRAWFLAGQIQAQLKARFGPSWWHSPEAGEFLKTLWAKGNALSAREVAQAIGEPGIEPDVLLLRLGTTLQVPIRLDMKSEDAVSAPGPEGAPSVATPQPEGSTNAPAAGPGQ
>NZ_CP006003.1|WP_046715483.1|8403995_8405039_-|antifreeze-protein
MGIFDTIKGEAKRNFIARADTAKGEIIYKYPENNIRMLTQLTVDADEVALFVKDGKVEGKLGAGRHQLDSNNIPFLSRLLEKFTGGNLFVAEVFFVSVREFPGIKFGGPIGDVRDPETGLGIGTMVYGDFSIRVTDPEKLVVGLVGMGRSNNEALLGWFKNQVLKVTRDRIAELLVKKRWPLLDVTSGAYTEEIETEVIGGLKPHVDDYGLTVVRMGNFHVSIKEEDEATLKKLGKDVAYSRLAGGFQQYAQGQAMLGAAEGMAKGGESSGNALGGMGMGMGFGMAQQFMNNNQQQQQRPPEPAQQAAPADTRSPAQRLKEIKELKDAGVLSDDEYNAKRAELMKLL
>NZ_CP006003.1|WP_046715484.1|8405256_8406057_-|ABC-transporter-permease
MAFRPRRALAVFWKDFLDLRKNVGLLVSMAVLPTVMVAVPIIVVWTYVNTPNQADLRSVAQFYDPSLPLGASAARFLIDKTLTDWFGLFLVMPIFVPILIASQSVAGEKERRTLEPLLASPVTAAELVAGKSLASLVPAVVITWVAFILFCVGVDLVAWPLVQGPLMPNALWTFGVLVIAPLFAFFGNGVAVLISARVSEARMAQQISALVVLPLVGMVGGQVAGVLKAGFMYYALQGAVVLVLDLVLLWASIRLLDRERLVSRWG
>NZ_CP006003.1|WP_046715485.1|8406059_8406977_-|ABC-transporter-ATP-binding-protein
MSGIDVQGLGKRFGERVAVEGLTFHVRPGEVFGLLGPNGAGKTTTVRMLTGLLTPSEGQVSVWGHRVDRDGEALRKVVGLLTEQPGLYDRLTARENLRFFMKLHELDEAKAWPRTRHYLSRFGLGDRELEPVGGFSKGMRQKLAIVRTLVHDPKVIFLDEPTSGLDPESARTVRDAVAELAAEGRTIVLCSHNLAEVERLCERVAVVKRRLLLMGPVRELRRAGQALEVRVEGEAERYRNVLASLPFAPNVLTEGMRLRVMLEDDAHAPDVLACLVGAGARVHSAVPAQRPLEEVYLDLLREGGV

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Crispr_ID: NZ_CP006003_25

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP006003_25

8885489-8885577

Orphan

Consensus_repeat	Method
AACCGCGAGGAGGACCCGTTCGGTGACGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP006003_25

>merge|NZ_CP006003|25|8885489-8885577|CRISPRCasFinder
AACCGCGAGGAGGACCCGTTCGGTGACGCCAACTCCTCTTCGGAGCCGAGGCGCACCACCAACCGCGAGGAGGACCCGTTCGGCGACGC

>NZ_CP006003|25|23|8885489-8885577|CRISPRCasFinder
AACCGCGAGGAGGACCCGTTCGGTGACGC	CAACTCCTCTTCGGAGCCGAGGCGCACCACC
AACCGCGAGGAGGACCCGTTCGGCGACGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP006003.1\|WP_046715810.1\|8872970_8873495_-\|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase	unknown	unknown	gnl\|CDD\|223872
NZ_CP006003.1\|WP_046715822.1\|8889453_8890467_-\|tRNA-epoxyqueuosine(34)-reductase-QueG	unknown	unknown	gnl\|CDD\|272993
NZ_CP006003.1\|WP_046718416.1\|8877271_8877541_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046715823.1\|8890485_8891049_-\|ATP:cob(I)alamin-adenosyltransferase	unknown	unknown	gnl\|CDD\|376665
NZ_CP006003.1\|WP_046715815.1\|8879484_8880306_-\|bifunctional-DNA-formamidopyrimidine-glycosylase/DNA-(apurinic-or-apyrimidinic-site)-lyase	unknown	unknown	gnl\|CDD\|234899
NZ_CP006003.1\|WP_046715811.1\|8873491_8874265_-\|FAA-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|223257
NZ_CP006003.1\|WP_046715827.1\|8893011_8894865_+\|cytochrome-c	unknown	unknown	gnl\|CDD\|223744
NZ_CP006003.1\|WP_046715812.1\|8874261_8875077_-\|4-hydroxy-tetrahydrodipicolinate-reductase	unknown	unknown	gnl\|CDD\|234595
NZ_CP006003.1\|WP_046715824.1\|8891188_8891983_+\|thymidylate-synthase	unknown	unknown	gnl\|CDD\|234984
NZ_CP006003.1\|WP_046715821.1\|8888524_8889481_-\|EamA/RhaT-family-transporter	unknown	unknown	gnl\|CDD\|273359
NZ_CP006003.1\|WP_046715819.1\|8886213_8887698_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|273582
NZ_CP006003.1\|WP_046715813.1\|8875129_8876017_-\|4-hydroxy-tetrahydrodipicolinate-synthase	unknown	unknown	gnl\|CDD\|235107
NZ_CP006003.1\|WP_046715820.1\|8887756_8887969_-\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|224393
NZ_CP006003.1\|WP_046715814.1\|8876033_8877275_-\|diaminopimelate-decarboxylase	unknown	unknown	gnl\|CDD\|143501
NZ_CP006003.1\|WP_046715817.1\|8882470_8883517_-\|YihY/virulence-factor-BrkB-family-protein	unknown	unknown	gnl\|CDD\|377085
NZ_CP006003.1\|WP_046715816.1\|8881633_8882458_+\|peptidase-M48	unknown	unknown	gnl\|CDD\|320692
NZ_CP006003.1\|WP_046715826.1\|8892539_8892947_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_052771236.1\|8880375_8881383_-\|Ku-protein	unknown	unknown	gnl\|CDD\|238408
NZ_CP006003.1\|WP_052771237.1\|8887961_8888402_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046715825.1\|8891979_8892459_+\|dihydrofolate-reductase	unknown	unknown	gnl\|CDD\|365932

Protein	Function_ID	Function_description	E-value
NZ_CP006003.1\|WP_046715810.1\|8872970_8873495_-\|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase	gnl\|CDD\|223872	COG0801, FolK, 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase [Coenzyme metabolism].	9.33319e-58
NZ_CP006003.1\|WP_046715822.1\|8889453_8890467_-\|tRNA-epoxyqueuosine(34)-reductase-QueG	gnl\|CDD\|272993	TIGR00276, iron-sulfur_cluster-binding_protein, epoxyqueuosine reductase. This model was rebuilt to exclude archaeal homologs, now that there is new information that bacterial members are epoxyqueuosine reductase, QueG, involved in queuosine biosynthesis for tRNA maturation. [Protein synthesis, tRNA and rRNA base modification].	7.48847e-106
NZ_CP006003.1\|WP_046715823.1\|8890485_8891049_-\|ATP:cob(I)alamin-adenosyltransferase	gnl\|CDD\|376665	pfam01923, Cob_adeno_trans, Cobalamin adenosyltransferase. Cobalamin adenosyltransferase This family contains the gene products of PduO and EutT which are both cobalamin adenosyltransferases. PduO is a protein with ATP:cob(I)alamin adenosyltransferase activity. The main role of this protein is the conversion of inactive cobalamins to AdoCbl for 1,2-propanediol degradation.The EutT enzyme appears to be an adenosyl transferase, converting CNB12 to AdoB12.	1.13214e-84
NZ_CP006003.1\|WP_046715815.1\|8879484_8880306_-\|bifunctional-DNA-formamidopyrimidine-glycosylase/DNA-(apurinic-or-apyrimidinic-site)-lyase	gnl\|CDD\|234899	PRK01103, PRK01103, bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase.	2.31048e-84
NZ_CP006003.1\|WP_046715811.1\|8873491_8874265_-\|FAA-hydrolase-family-protein	gnl\|CDD\|223257	COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism].	2.35181e-93
NZ_CP006003.1\|WP_046715827.1\|8893011_8894865_+\|cytochrome-c	gnl\|CDD\|223744	COG0672, FTR1, High-affinity Fe2+/Pb2+ permease [Inorganic ion transport and metabolism].	9.90759e-32
NZ_CP006003.1\|WP_046715812.1\|8874261_8875077_-\|4-hydroxy-tetrahydrodipicolinate-reductase	gnl\|CDD\|234595	PRK00048, PRK00048, dihydrodipicolinate reductase; Provisional.	6.72543e-115
NZ_CP006003.1\|WP_046715824.1\|8891188_8891983_+\|thymidylate-synthase	gnl\|CDD\|234984	PRK01827, thyA, thymidylate synthase; Reviewed.	0
NZ_CP006003.1\|WP_046715819.1\|8886213_8887698_+\|hypothetical-protein	gnl\|CDD\|273582	TIGR01370, Uncharacterized_protein_DR_0705, extracellular protein. Original assignment of this protein family as cysteinyl-tRNA synthetase is controversial, supported by but challenged by and by subsequent discovery of the actual mechanism for synthesizing Cys-tRNA in species where a direct Cys--tRNA ligase was not found. Lingering legacy annotations of members of this family probably should be removed. Evidence against the role includes a signal peptide. This family as been renamed "extracellular protein" to facilitate correction. Members of this family occur in Deinococcus radiodurans (bacterial) and Methanococcus jannaschii (archaeal). A number of homologous but more distantly related proteins are annotated as alpha-1,4 polygalactosaminidases. The function remains unknown. [Unknown function, General].	9.3619e-45
NZ_CP006003.1\|WP_046715813.1\|8875129_8876017_-\|4-hydroxy-tetrahydrodipicolinate-synthase	gnl\|CDD\|235107	PRK03170, PRK03170, dihydrodipicolinate synthase; Provisional.	2.31417e-155
NZ_CP006003.1\|WP_046715820.1\|8887756_8887969_-\|transcriptional-regulator	gnl\|CDD\|224393	COG1476, COG1476, Predicted transcriptional regulators [Transcription].	3.01181e-20
NZ_CP006003.1\|WP_046715814.1\|8876033_8877275_-\|diaminopimelate-decarboxylase	gnl\|CDD\|143501	cd06828, PLPDE_III_DapDC, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Diaminopimelate Decarboxylase. Diaminopimelate decarboxylase (DapDC, EC 4.1.1.20) participates in the last step of lysine biosynthesis. It converts meso-2,6-diaminoheptanedioate to L-lysine. It is a fold type III PLP-dependent enzyme that contains an N-terminal PLP-binding TIM-barrel domain and a C-terminal beta-sandwich domain, similar to bacterial alanine racemases. DapDC exists as homodimers with active sites that lie at the interface between the TIM barrel domain of one subunit and the beta-sandwich domain of the other subunit. Homodimer formation and the presence of the PLP cofactor are required for catalytic activity.	0
NZ_CP006003.1\|WP_046715817.1\|8882470_8883517_-\|YihY/virulence-factor-BrkB-family-protein	gnl\|CDD\|377085	pfam03631, Virul_fac_BrkB, Virulence factor BrkB. This family acts as a virulence factor. In Bordetella pertussis, BrkB is essential for resistance to complement-dependent killing by serum. This family was originally predicted to be ribonuclease BN, but this prediction has since been shown to be incorrect.	3.29874e-69
NZ_CP006003.1\|WP_046715816.1\|8881633_8882458_+\|peptidase-M48	gnl\|CDD\|320692	cd07333, M48C_bepA_like, Peptidase M48C Ste24p bepA-like, integral membrane protein. This family contains peptidase M48C Ste24p protease bepA (formerly yfgC)-like proteins considered to be putative metallopeptidases, containing a zinc-binding motif, HEXXH, and a COOH-terminal ER retrieval signal (KKXX). They proteolytically remove the C-terminal three residues of farnesylated proteins. They are integral membrane proteins associated with the endoplasmic reticulum and golgi, binding one zinc ion per subunit. In eukaryotes, Ste24p is required for the first NH2-terminal proteolytic processing event within the a-factor precursor, which takes place after COOH-terminal CAAX modification (C is cysteine; A is usually aliphatic; X is one of several amino acids) is complete. Mutation studies have shown that the HEXXH protease motif, which is extracellular but adjacent to a transmembrane domain and therefore close to the membrane surface, is critical for Ste24p activity. Several members of this family also contain tetratricopeptide (TPR) repeat motifs, which are involved in a variety of functions including protein-protein interactions. BepA has been shown to possess protease activity and is responsible for the degradation of incorrectly folded LptD, an essential outer-membrane protein (OMP) involved in OM transport and assembly of lipopolysaccharide. Overexpression of the bepA protease causes abnormal biofilm architecture.	3.12815e-69
NZ_CP006003.1\|WP_052771236.1\|8880375_8881383_-\|Ku-protein	gnl\|CDD\|238408	cd00789, KU_like, Ku-core domain, Ku-like subfamily; composed of prokaryotic homologs of the eukaryotic DNA binding protein Ku. The alignment includes the core domain shared by the prokaryotic YkoV-like proteins and the eukaryotic Ku70 and Ku80. The prokaryotic Ku homologs are predicted to form homodimers. It is proposed that the Ku homologs are functionally associated with ATP-dependent DNA ligase and the eukaryotic-type primase, probably as components of a double-strand break repair system.	2.07962e-84
NZ_CP006003.1\|WP_046715821.1\|8888524_8889481_-\|EamA/RhaT-family-transporter	gnl\|CDD\|273359	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter. [Transport and binding proteins, Amino acids, peptides and amines].	6.06532e-19
NZ_CP006003.1\|WP_046715825.1\|8891979_8892459_+\|dihydrofolate-reductase	gnl\|CDD\|365932	pfam00186, DHFR_1, Dihydrofolate reductase.	7.40322e-87

>NZ_CP006003.1|WP_046715817.1|8882470_8883517_-|YihY/virulence-factor-BrkB-family-protein
MRLPRLKYLTWREFARRFVKEFQEDTVTDIAAQLSYYLLFSLFPFLFFLVTLVAYLPFAPGAVDAMLERLRPLVPGDALGLVTQHLTALVDQPRPRLLTVGLLLALWSASRGADALRKALNLAYDVPESRPVWKTQGLAVVVTLVGTLLVPLSFAVFLLGGRLGAWLATRLQVEEAFYLVWSWARWPFTAGLVMLVVSLCYYLLPDVKQRFKYITPGSVLGTLAWMGSTWGFTQYVEHFGKYNVTYGSIGGVVVLLLWLYISGLVFILGGEINAILEHASAEGKEKGARDFDEPAPAEPPLKTPGAAKSAASAKRSRRAFWRWRRRVARGKSPEPSAAEQQPPPSSLH
>NZ_CP006003.1|WP_046715816.1|8881633_8882458_+|peptidase-M48
MQRILSAVWSLALVLGVTAGCTTQRVQAEKALAKTFISDEQEEEIGQQVKKELEQKEKIKYVEDPTIVEYVRGLSAPILKQATKDRPGVKWKINVIDDPKMVNAFATPGGYLYVYTGLILASDTEAELAGVMAHEAGHVVGRHSARAMVNQMGIQTVTQLALGQNPGAAAQVAAQLVGGGALLAHSRSEELEADEFGARYSSGAGFDPKGLITFFQKLQAQGGDTPGVMKWLSTHPTNRQRISDLEKYIKEKNLRGTNNSPGQLPAIKQKLGAR
>NZ_CP006003.1|WP_052771236.1|8880375_8881383_-|Ku-protein
MARPVWVGSLSFGLVTLPVRLHGTVSSRQARFHLLHDADGARIQNKRVCSADGEEVPLEHVVRGYTLEDGRQVTVTSGELDALDPVSSRVIALEEFVDPAQVDPLLLDTSYHLVPARGAEPAYALMAEALRASGRVGVGRLVLYQKGHLCLVRPHARGLVLSTLHSVDEVVSQEQLSELELTGASVAPAELDAALRLIESRSATFDPRRHPDAHRARVMAFLERRARAQARSKRVPRAGPEVGAPAGAKVRGPEATPVEGALRLRPRLAAREVREDSGGLGSKPFRVAPGEGGAPDDPREASTPWPHEAPGPATPYATPEGSGGLGAPDPKKPRG
>NZ_CP006003.1|WP_046715815.1|8879484_8880306_-|bifunctional-DNA-formamidopyrimidine-glycosylase/DNA-(apurinic-or-apyrimidinic-site)-lyase
MPELPEVEIARRNLVRWFTGRRLVRAEADDTRVFRGAERARFAQLQGRLESLVRRGKYLLFSFEEGRGLLGHLGMTGKFVRRGPTDVVPYSRARFHLDDGQVLHFADARMFGRMEPTPAAGLRSLDVVKALGRDPLADGLTAGQLEQAVASSKQDLKVALMDQARIAGLGNIHAAEALFRAGLHPARKPSTLTPEDWKRLVQAIRESIDFGLEEQQGEEPVYLEEGGSENPFLVYGRGEGPCSRCGSPVESFPQAGRTTYACPKCQPRGRAGK
>NZ_CP006003.1|WP_046718416.1|8877271_8877541_-|hypothetical-protein
MAGREVLAMRRALASLSIAALLVLGMVACGIKGAPKPPLAPSAPATETPPPPSDTAPTTVAPTGPSVSPTTDGGVVTPTTTTDADAGVP
>NZ_CP006003.1|WP_046715814.1|8876033_8877275_-|diaminopimelate-decarboxylase
MSFFTYRKGVLHAEGVPLPAIADAVGTPAYVYSTAALTGHFGAVVDAFGEARPLICYSVKANSNLSILRLFAGLGGGFDIVSGGELARVRQAGGEAAKTVFAGVGKTPEEMAAALDAGLLLFNVESAEELEALDAVGRRLGKKAPFALRVNPEVDARTHRYIATGLKTSKFGVPFEEAVALYERSKKMKGLKAFGLDCHIGSQLTQSSPVRAALTKVAGLYRELKARKHPLEYLDVGGGLGITYTDETPPSVAEYARVVLAATKDTGARLVLEPGRSLVGNAGVLLTRVLYRKLTPARRFAIVDAGMNDLLRPALYEAHHGFVPLVKRRGKEVEVDVVGPVCESTDVLAKARSLVLPQPGELYAFLSAGAYGMSMASNYNSRPRPAEVLVAEEAWRVVRERERTEDLWRGERA
>NZ_CP006003.1|WP_046715813.1|8875129_8876017_-|4-hydroxy-tetrahydrodipicolinate-synthase
MKTFEGSMTALATPFRNGALDESAYRALVRQQIEGGTSVLIPMGTTGESVTMSADERARAVRVVVEESKGRALVVGGAGSNNTAEVIEGVARVRDAGADGTLIVTPYYNKPTQTGLVEHFRAVARAHPGFPIIAYNVPGRTGVDLLPETVQRLCDFPEVVAIKEATGNMARAVDILEKCGERLTLLSGDDFTVLPFIACGGKGVISVSSNVAPRMMADLVASARAGDFAKARELQVKLNNLHRLLFVESSPIPVKWGLHLLGLFGPEVRLPLVPMTEPNAAKLAEELRQLGLLKH
>NZ_CP006003.1|WP_046715812.1|8874261_8875077_-|4-hydroxy-tetrahydrodipicolinate-reductase
MIRTVITGITGRMGSTLLRLSRDAEDLRVVGATERPGSASVGLDAGLAARIGALEVQVSDDLGRALDAAKADVVIDFTSAEVSVAHAKACAERGVAFVCGSTGFSPEAAQALAESAKQVPIVAAPNMSVGVNLVIRVAAELARVLGPGFDVEVLEAHHRMKKDAPSGTALRLAEVLASALGRTQDDLTFARHGQIGARPANEIGVQTLRGGDVVGEHTVYFFGEGERIELTHRATSRDQFGLGALRAARWVVGRPPGLYDMADVLGFQRTS
>NZ_CP006003.1|WP_046715811.1|8873491_8874265_-|FAA-hydrolase-family-protein
MTTARYCRFLYEGRAHHGRVEGTEVVVLSSAPWLAGVKDTGIRRSLSAVSLLVPADASKVVCIGQNYRKHAEEMGKPVPVEPLIFTKPSTALNGPRSPIRIPKASQEVHFEAELALVIGEKLKNADEMTAARAIWGLTCFNDVTARDIQKRETQHTRAKGYDTFACAGPWAVTGLSPADLQISCRVNGQVRQDSRTSDMVFSPARLVSFISHIMTLLPGDMISTGTPSGVGKLAAGDSVEVEIEGIGTLLNPVEMEP
>NZ_CP006003.1|WP_046715810.1|8872970_8873495_-|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase
MSTIVYVGLGSNEGDRESHLVAALTALSRIDAVAVLRCSSLFDSAPVGPPQPRYLNAVVALDCALSPQRLLVILQQIEKDLGRRREQHWGPRTIDLDILFWEGQVVADPHLQVPHLELHKRRFALEPLAELAPDLLHPVLGTTVKELLGKLAPQDVRRSEATWWPEASLPSNET
>NZ_CP006003.1|WP_046715819.1|8886213_8887698_+|hypothetical-protein
MRVAMKWLLAWTWLALLAACGDKAPPDDFDTGQDAILPDARTLPCTTLQFERGALPSGQSVQGLNTQTLSGTQDRWAEYVEFAPNSSATCTHPLPTGVSADSVVAAEVGVNYRGPAKAQMRWVIEAWDYSTNSWALVGDNTFAQSWRWTATSLALPTPARFLSGGPVKLRYRTDSTADASLLDLLVVRVQVAASDAGTPTDAGTPTDAGTSTDAGTPTDAGTQVPWSNVKSFTYQLTNYPQGKLDTIAASKFDLAIVELVRDGSSGYFTAAEISALKARGKQVLAYFEIGAIEEYRPEWSQVPADLKLGPVSGWPDEQYVKYWDERWWPIVQGRIDRALAAGFNGCYLDMVVTYEEIPANSAGTNRADLARKMVALIARINTYAKARNPDFKVVPQNSPELVDDPAYLPAIDGLGMEDMYWSDDVACDEGWCEENRTNAARVRAAGKLVLSTDYATQSAHVADAYTRSRAAGFVPYVTVRALDRVTVNAGWDPQ
>NZ_CP006003.1|WP_046715820.1|8887756_8887969_-|transcriptional-regulator
MPEPRLTNEIRTLRFLAGEMTQAALGEKVGLTRQTIAAIEAGKYSPSLETAFRIAEVFGKPLEAVFRWER
>NZ_CP006003.1|WP_052771237.1|8887961_8888402_-|hypothetical-protein
METQMSSRERFAWVFLVLLVVSYGTYFTAVAVLDARGELTFWSQLIMLTASAVFQGVVLGVSALVGRMRRAPGERTAPDERDRAIAHRSASVAYYVLMGGMVLVGCIMPFGASGWKVANAAILAIVIAELVHTGLTVSGYRRGLRA
>NZ_CP006003.1|WP_046715821.1|8888524_8889481_-|EamA/RhaT-family-transporter
MGTAPAGPLNSSTPSLRGVYAALLIQVLISAGTYLAAKRAMAELPPLTVVFWRFMLSGLVFVALLALVPGPKLPPRQAWGRILFLGLMAGPVNQLFFFTGLSRSTAAHGALLYSLMPLGVYVLSLARGQERASSRTLAGIAVAFVGVVVLLLGRGLAEARGSLMGDLLILCAVMAWVVYTTEGKPFVAIHGPLRATAWCMTMATVMMLPFAPFVANPEALVATSTLAKGCIVYLGLLTSVVAYVLWYYALSKVSASKVAIFSNLQPAATALAAWALLDEVLHWEIAVGGVLVLAGVRLTQTAVTRPPPLAPAADRPAT
>NZ_CP006003.1|WP_046715822.1|8889453_8890467_-|tRNA-epoxyqueuosine(34)-reductase-QueG
MLPTAPLRDLARSVGFDLVGFARAEPIEPRFLLSWLEAGYAADMDWMGERAEERLDVGRLLPGAKTVISFVNNYYRDEEPSKGSPIARYARGRDYHSTLRDRMKAFRKAIIQMAPGLGTYGSVDSGPLMEKVWAARAGLGYVGKNGCFITEPFGSWVLLATLVIDVEVDEYADGPTADRCGACRRCLVSCPTGALVGNSQVNAGACLSYQTIENREREVPEPFRFKFNNLIFGCDICQQVCPLNRKPVFAEHPRFAPRAVAELGTLELAGLTTEQYEQLIPGTALARARYDVLRRNAVYALGVARQADARHLLEKLSDDSSELVRSAAQWALRQLVP
>NZ_CP006003.1|WP_046715823.1|8890485_8891049_-|ATP:cob(I)alamin-adenosyltransferase
MKIYTKRGDAGDTGLFGGGRVPKDDVRVDAYGEVDELNATLGLVRGFSPPPELDAMLHRLQDQLFTVGAVMATPMDAKAASHLPPLKESWVTDMENAMDRFDNELPKMTHFILPGGTQAAAALHLARTVCRRAERRAVPLLREGTIPKDVVIFLNRLSDLLFVMARVANHRANVQDVKWIPEKPSES
>NZ_CP006003.1|WP_046715824.1|8891188_8891983_+|thymidylate-synthase
MQPYLNLLDHVLKHGTKKGDRTGTGTLSVFGPQLRFDLTQGFPLVTTKKLHVKSILHELLWILAGDTNVRTLQAQGVTIWDEWADAEGKLGPVYGHQWRSWSAPDGGHIDQMKALVDGLKKNPDSRRHIVSAWNVADLPGMKLPPCHVLFQFYVADGKLSCQLYQRSADLFLGLPFNIASYSALTMMVAQATGLVAHEFIHTIGDAHLYLNHVEQAREQLSRAPRALPRLKLNPEVKDLFAFKYEDFTLEGYEPHPAIKAPVAV
>NZ_CP006003.1|WP_046715825.1|8891979_8892459_+|dihydrofolate-reductase
MRLSAIVALASNRVIGANNQLPWRLPADLARFKRLTMGHTLVMGRKTYESIGRPLPGRTFIVVTRQQDFAPPGVTVAHSVEQALQQAEARGDDEVFIAGGADLYAQTMDRIQRLYLTRIARDYAGDTFFPEVDLSGWRLIEEEPHPESEPPYAFLTYER
>NZ_CP006003.1|WP_046715826.1|8892539_8892947_+|hypothetical-protein
MRTSLVPGLTPSPWLPTPRLPWRAASLLGATLTLANTTTLARLSRQLEAQQRQRRFRPRALRALAVGATAIGATGLGALAIGAVSIGALTVASLALGHLRGGDWRIARLRIHSLEVERWTALGNPSPIPGLPTPA
>NZ_CP006003.1|WP_046715827.1|8893011_8894865_+|cytochrome-c
MNHAVRVLLCLLFLVPWSALAAESGTDERTWHRLVGILQYLEADYPAAIESQSAFELEEQKSFAAEAVSAAQELGAQASIFVPRVKAIQARVDQSKDPEGVSRDCGALVQDLVLVGGLARSPRHPPDLKRGAELFQTNCAACHAADGSANLPIATTMEPAPANFQDAELMGGLTPYKAFNTTSFGVPGTAMPAFPTLTEDERWSLAFFAFTLRLPPCEGTPPRASLERLANATDDELVKDFGADKLACLRRELPQVDEERSLMAARDGVQEAMRQGAAGNPSAAKAALLDAYLNGLEPVEPKLTSRDSALVLKLEQGFLKARLAAENGSPKLQDEGRELIALLDQARRDSGSAADLVSTLWLTVFILLREGFEAAIIVAALLAALKKMKATEHVRVVHAGWMSALVVGAIAYVLGRHLLAGAEREWMEGVAALVAVGMLLYAALWLNARSNMSQFMGELREKMKGALGRGSLFGLFLIAFTAVLRESFETAIFLQGLALDSPAGVAWGALVGAVALVILVLFINRLGFRLPMKTLFNISTVVLVVTAVMLLGKGLHSLQEVGALPLYPVSFVTIDLLGIYPDLLSLVPQVLLAAAPLALVLMRRRARSERVTEVSAS

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Crispr_ID: NZ_CP006003_26

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP006003_26

9299082-9299170

Orphan

Consensus_repeat	Method
CCGCGCCAAGGGCGAGGCCGAGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP006003_26

>merge|NZ_CP006003|26|9299082-9299170|CRISPRCasFinder
CCGCGCCAAGGGCGAGGCCGAGGAGGCGCTGCGCTCCGCGGAGGGCTACGCCATCGAGCGCGTCAACCGCGCCAAGGGCGAGGCCGAGC

>NZ_CP006003|26|24|9299082-9299170|CRISPRCasFinder
CCGCGCCAAGGGCGAGGCCGAGG	AGGCGCTGCGCTCCGCGGAGGGCTACGCCATCGAGCGCGTCAA
CCGCGCCAAGGGCGAGGCCGAGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP006003.1\|WP_082165650.1\|9291504_9292890_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379603
NZ_CP006003.1\|WP_046716087.1\|9289674_9290964_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046716091.1\|9296036_9296762_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046716090.1\|9292911_9293481_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046718480.1\|9293497_9295411_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|270916
NZ_CP006003.1\|WP_046716086.1\|9288137_9289655_+\|PLP-dependent-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|224089
NZ_CP006003.1\|WP_046716094.1\|9299375_9300314_+\|protease-modulator-HflC	unknown	unknown	gnl\|CDD\|259803
NZ_CP006003.1\|WP_046716097.1\|9309744_9310287_-\|cytochrome-c-nitrite-reductase-small-subunit	unknown	unknown	gnl\|CDD\|274453
NZ_CP006003.1\|WP_046716099.1\|9314436_9314673_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046716098.1\|9312882_9314406_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226584
NZ_CP006003.1\|WP_046716088.1\|9290966_9291425_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046718484.1\|9303939_9304644_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|197318
NZ_CP006003.1\|WP_082165422.1\|9295526_9296021_-\|VOC-family-protein	unknown	unknown	gnl\|CDD\|319923
NZ_CP006003.1\|WP_046716092.1\|9297820_9298204_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_052771267.1\|9300405_9303783_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366285
NZ_CP006003.1\|WP_082165425.1\|9310636_9312733_+\|glucose-dehydrogenase	unknown	unknown	gnl\|CDD\|369642
NZ_CP006003.1\|WP_046716096.1\|9308263_9309748_-\|ammonia-forming-cytochrome-c-nitrite-reductase-subunit-c552	unknown	unknown	gnl\|CDD\|349426
NZ_CP006003.1\|WP_046716095.1\|9305986_9308200_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227511
NZ_CP006003.1\|WP_082165424.1\|9304925_9305861_+\|HNH-endonuclease	unknown	unknown	gnl\|CDD\|225973
NZ_CP006003.1\|WP_082165423.1\|9296920_9297715_-\|XRE-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|375319

Protein	Function_ID	Function_description	E-value
NZ_CP006003.1\|WP_082165650.1\|9291504_9292890_+\|hypothetical-protein	gnl\|CDD\|379603	pfam14412, AHH, A nuclease family of the HNH/ENDO VII superfamily with conserved AHH. AHH is a predicted nuclease of the HNH/ENDO VII superfamily of the treble clef fold. The name is derived from the conserved motif, AHH. It is found in bacterial polymorphic toxin systems and functions as a toxin module. Like WHH and LHH, the AHH nuclease contains 4 conserved histidines of which, the first one is predicted to bind a metal-ion and the other three ones are involved in activation of a water molecule for hydrolysis.	7.86083e-27
NZ_CP006003.1\|WP_046716098.1\|9312882_9314406_+\|hypothetical-protein	gnl\|CDD\|226584	COG4099, COG4099, Predicted peptidase [General function prediction only].	5.08815e-11
NZ_CP006003.1\|WP_046716097.1\|9309744_9310287_-\|cytochrome-c-nitrite-reductase-small-subunit	gnl\|CDD\|274453	TIGR03153, cytochr_NrfH, cytochrome c nitrite reductase, small subunit. Members of this protein family are NrfH, a tetraheme cytochrome c. NrfH is the cytochrome c nitrite reductase small subunit, and forms a heterodimer with NrfA, the catalytic subunit. While NrfA can act as a monomer, NrfH can bind to and anchor NrfA in the membrane and enables electron transfer to NrfA from quinones. [Energy metabolism, Electron transport].	8.16174e-67
NZ_CP006003.1\|WP_046718480.1\|9293497_9295411_-\|hypothetical-protein	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	8.27189e-99
NZ_CP006003.1\|WP_046716086.1\|9288137_9289655_+\|PLP-dependent-aminotransferase-family-protein	gnl\|CDD\|224089	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism].	1.7223e-128
NZ_CP006003.1\|WP_046716094.1\|9299375_9300314_+\|protease-modulator-HflC	gnl\|CDD\|259803	cd03405, SPFH_HflC, High frequency of lysogenization C (HflC) family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily. This model characterizes proteins similar to prokaryotic HflC (High frequency of lysogenization C). Although many members of the SPFH (or band 7) superfamily are lipid raft associated, prokaryote plasma membranes lack cholesterol and are unlikely to have lipid raft domains. Individual proteins of this SPFH domain superfamily may cluster to form membrane microdomains which may in turn recruit multiprotein complexes. Escherichia coli HflC is an integral membrane protein which may localize to the plasma membrane. HflC associates with another SPFH superfamily member (HflK) to form an HflKC complex. HflKC interacts with FtsH in a large complex termed the FtsH holo-enzyme. FtsH is an AAA ATP-dependent protease which exerts progressive proteolysis against membrane-embedded and soluble substrate proteins. HflKC can modulate the activity of FtsH. HflKC plays a role in the decision between lysogenic and lytic cycle growth during lambda phage infection.	6.51615e-109
NZ_CP006003.1\|WP_046718484.1\|9303939_9304644_-\|hypothetical-protein	gnl\|CDD\|197318	cd09084, EEP-2, Exonuclease-Endonuclease-Phosphatase (EEP) domain superfamily; uncharacterized family 2. This family of uncharacterized proteins belongs to a superfamily that includes the catalytic domain (exonuclease/endonuclease/phosphatase, EEP, domain) of a diverse set of proteins including the ExoIII family of apurinic/apyrimidinic (AP) endonucleases, inositol polyphosphate 5-phosphatases (INPP5), neutral sphingomyelinases (nSMases), deadenylases (such as the vertebrate circadian-clock regulated nocturnin), bacterial cytolethal distending toxin B (CdtB), deoxyribonuclease 1 (DNase1), the endonuclease domain of the non-LTR retrotransposon LINE-1, and related domains. These diverse enzymes share a common catalytic mechanism of cleaving phosphodiester bonds; their substrates range from nucleic acids to phospholipids and perhaps, proteins.	3.74678e-29
NZ_CP006003.1\|WP_082165422.1\|9295526_9296021_-\|VOC-family-protein	gnl\|CDD\|319923	cd07262, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	7.33804e-48
NZ_CP006003.1\|WP_046716096.1\|9308263_9309748_-\|ammonia-forming-cytochrome-c-nitrite-reductase-subunit-c552	gnl\|CDD\|349426	cd00548, NrfA-like, cytochrome c nitrite reductase and similar proteins. This family contains cytochrome c nitrite reductase (also known as cytochrome c552, or NrfA) and similar proteins. The pentaheme enzyme NrfA catalyzes the electron reduction of nitrite to ammonia in the nitrogen cycle. This enzyme can also transform nitrogen monoxide and hydroxylamine, two potential bound reaction intermediates, into ammonia. It is a homodimer, with each monomer containing four classical CXXCH type heme-binding sites along with an alternative CXXCK heme-binding motif, which is important for catalysis. This family also includes octaheme nitrite reductase (TvNiR) from the haloalkaliphilic bacterium Thioalkalivibrio paradoxus which catalyzes the reduction of nitrite and hydroxylamine to ammonia as well as the reduction of sulfite to sulfide.	0
NZ_CP006003.1\|WP_052771267.1\|9300405_9303783_-\|hypothetical-protein	gnl\|CDD\|366285	pfam00754, F5_F8_type_C, F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.	6.05747e-08
NZ_CP006003.1\|WP_082165425.1\|9310636_9312733_+\|glucose-dehydrogenase	gnl\|CDD\|369642	pfam07995, GSDH, Glucose / Sorbosone dehydrogenase. Members of this family are glucose/sorbosone dehydrogenases that possess a beta-propeller fold.	2.92665e-78
NZ_CP006003.1\|WP_046716095.1\|9305986_9308200_+\|hypothetical-protein	gnl\|CDD\|227511	COG5184, ATS1, Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell division and chromosome partitioning / Cytoskeleton].	1.52594e-43
NZ_CP006003.1\|WP_082165424.1\|9304925_9305861_+\|HNH-endonuclease	gnl\|CDD\|225973	COG3440, COG3440, Predicted restriction endonuclease [Defense mechanisms].	1.17599e-11
NZ_CP006003.1\|WP_082165423.1\|9296920_9297715_-\|XRE-family-transcriptional-regulator	gnl\|CDD\|375319	pfam17765, MLTR_LBD, MmyB-like transcription regulator ligand binding domain. This domain is found in a family of actinobacterial transcription factors. The structure shows it has a PAS domain like fold and it is bound to Myristic acid.	8.45933e-13

>NZ_CP006003.1|WP_046716092.1|9297820_9298204_+|hypothetical-protein
MNDRLVYRLDAFAAISMGCALLLVATPLTTLAGWTLPPSFLFGLGVFLVPWAGINVWASTQSPVATSMLWVHLLVDGTWVLGSVALMLAHSDTLSTLGFVLLAGQAVSVLGVFTLKLAPFLRPRLAR
>NZ_CP006003.1|WP_082165423.1|9296920_9297715_-|XRE-family-transcriptional-regulator
MKRTVEVAARRPRKGAPKPRSELGALLKDWRASRGKSQLALSFDAEVSPRHLAFIESGRTEPSQDMVLRLAEALGLGLRERNALLVAAGYAPEFGESDWNSEEMRELRQAAALILGAHEPHPALALDAASTVLDANAGALAMMGLGRDALGRTNLMDLVFAPGRVRSAIGNWQDIAGYLLGRLKENARLRGPGSEVANVLARVLTYPDARELPARMPGRSAGVLVPLTFMVDGVATQWFTTVTTFGAPLHALAEEVTIEQFYPR
>NZ_CP006003.1|WP_046716091.1|9296036_9296762_-|hypothetical-protein
MDSVKSYSDFEKEVDPHGDARAEPLIIQFGFPGSGSTFVWQVLNSLLGNVKKTHKCPQFRPEDRVVVTVRDFRDILCTYFKRANLPVTKASIDFLVKEHAEDNSSFSDLYRVSETWGDRKNVLWLRYEDFFNNFDYLFGQVEKFFGMKLTDEQKARARASYSLEANKARSERVAVVCRQEGGAGWIDEKWQAYTIDGINGLHVTGDGSVGKWRQIIPKEWHGYVNELLAEPLKRYGYPLES
>NZ_CP006003.1|WP_082165422.1|9295526_9296021_-|VOC-family-protein
MKLSARGEEVLAAINDSGLSVEEKAVLARALQKSVARAGLLLGHLSFGVRDIARAIAFYDAALAPLGYTRVWSSERSAGYGPEGEGDTLALFLRPEATPPGDGFHLAFNAPSREAVDAFHAACLKHGGKDQGPPGLRPHYSDTYYACFVTDPEGHKLEAVHQLG
>NZ_CP006003.1|WP_046718480.1|9293497_9295411_-|hypothetical-protein
MQTGPRPSTSNPLVDPLLGQVLHERFRVLAPLGAGGMGRVYRALQLPLERVVALKVLSPSFPTASDPEFQRRFLLEASITAKLRHPNTVTIIDYGKTDDGTFYLAMEYLEGLTLAEHLASGPLPWRRAVDIAQQVCRSLREAHRLGVVHRDLKPANVMLLAEEGRAERHHVKVLDFGLVKPFVVEGATHLSVPDITQGGTFLGSPTYMAPEQARNQADARSDVYALGVLLYQMLMGRPPFLMQDTLELIFAHHKEAPPRFKMVRPDLSIPEAVEAVVCRCLEKQPAQRYESMDALLEALHAAVGPGASPVGDTGPGEAVTGPLSAAAPGAPSGAQGTLVLDISLDESGVFRAAPSRRSDRNRALVVGALGLLVCIVTVGVLGSRRSRAPEVPPAPVATETQVVPPAPVPEEPVTVEVPRPVRFRIASNPEGARVFWRGEERGTTPFVLEVPPDEEGMATAELTFVREGYRTDRVLAGGSGEVLLTQRLVRERPGRVRSAQTQEGAEWVSDDVLSAPMPMEVPVAAKPAVAQVETGRARGSGPIQLPESAKPPVELAGNLQPEFPQQARAAGREGLVVLKLVVTERGEVRDVTVMRGEEPFVSAAMRAVSTWRYQPALLEGRPVSVYRIVKVPFRLRN
>NZ_CP006003.1|WP_046716090.1|9292911_9293481_+|hypothetical-protein
MRYFKLSDDMSLQGRWLLGDPTDSRGQELDDPWMFKAGCAVQVEARLKIPIDHPGSPLDYSLAGVGNIPIVHEKAANIFAELAPDDVQLLPVDVDGQSEPYRILVATRLVRCIDDLASEEVRYWKPEDGRPEKVGRYRGVAGMRIDPTKVGSAKVFRTWGWTIALIVSEDIKEALQHARVTGGKFEEVA
>NZ_CP006003.1|WP_082165650.1|9291504_9292890_+|hypothetical-protein
MENDDVEKRMTPHWGILLLLMMGAGCATSQAVRLDTGEGHPLVYTPRTGEAPARLGADEFQEAVRKLAPTAPLSSRPRESALRLFNQDRHHARPTVRGRLGVVSVEDPRQGRLLMTERPEDDGELTSAYGDWCQRQTRSRDCLHLLDEDVALDAEGKRTLAFRLALNAVWDETAEALEDLTDREAMVSMLATTGAVYFALWLAPEPLLSKGVAATLTVALIAYLGWDTVWSLVQGWRVLAKEVEAATTFDEIQNAGERYGEVMGKNAARAFVMLAMAALGSTAQTLATRIPTLPGSGQASLVGAEQLGLRLAAAGQVTSVAVAQGGVITIALDPEALAGAARGTLAVSSEPVATAPHEHHIATNKWWDSTNLGGPWSPRFQKLFDRAGMSLDNAANKVRVPGHKGPHPQKYHEEVYERLEDAMEGCRSIQRCREVLVEELRVLAGEITRHGSRLNVLVTRS
>NZ_CP006003.1|WP_046716088.1|9290966_9291425_-|hypothetical-protein
MNLLLRGLLVVGVVASAGCGALRRMEGEAEYLRQQVYDYDYAVPLDTLWLTAKQMGSEVRDEAQGEDGVRTARIGLPRLSADGSSYTHTLYARAWTERGRSRLIFVDLRSREAPSDIFRRDVDAELDLISRFEPDEAKRIREGAKKAGQRAR
>NZ_CP006003.1|WP_046716087.1|9289674_9290964_+|hypothetical-protein
MGFFVSASGTLASRLIGVVLLVMLSGCRASYVQHTAKMRTLADEGRFDEALAELDTAARNEELELDPLLVAADRGGLLHRAGDWEASSRVFVEASRLADEHEVVRLSEEFTGNIPWRMGALERQTLHTLNALNYLQLGRADEAAVEARLTSALNLQRHLMQRYDVQLEHHLLAIPIDEELRPYLVQSVIGLYVSGLAHEVAGNEESAFIDYLAAWRITRSAPRGAPSSMTHLEPWLLAQARRLGRPELEELERAIQTPVAPGLDGAGELVVVVETGKLPQRCILERAEGQRVWSACPRPWVRGQVRVEVDGAGWETETVTSLENLLLRRGNVGALLDATRQPNLWARVGALSLFVVVPPLGGYLLLRTSIEHSTQIEQGWLSLPAEFQVARISLPPGRQTVRILRAGTELTREVDITARGLQVLVVPMH
>NZ_CP006003.1|WP_046716086.1|9288137_9289655_+|PLP-dependent-aminotransferase-family-protein
MARHTGSVFSVDVSGLEPTRAQPVSARISDRLRAAIRQGSLVGNARLPSARTLAKDFGVARNTVEGALAQLVSEGYIVRRRGSGSFVATHLPEHDAPPLVPSPTPPGASAPSRPPRLSQRALALRDYPGHTVAARTLPFTPSLPPVRLFPRDIWNRLLAREAARPGTDYWTYGASNGLPALREAIAAHASAMRAVRCTPEQVVVVTSTQQAVELAGKALADPGDRVWVELPGYPPVRHCLRSIGLHIVDVPVDTEGLDVDAGRRLAPEARLAYVTPAHQYPLGHELSLTRRKALLDWARAADAHVIEDDYDGDYRYEGRPIASLQGMDAEDRVIYVGSFNKLLFPGLRIAYAIVPQALVGAFVDAKHVADGHTALLTQGVLAAFIQEGHLARHLRKTRAAYDERRRAFLEEARVLEPWLEFGPARAGLHVAAYFREDASRRWDDRAVAQACAKEGIEVHALSRYGATGRAGLVFGFASATRAATRSGLQVVRRVLEDGAGAPRKG
>NZ_CP006003.1|WP_046716094.1|9299375_9300314_+|protease-modulator-HflC
MSRVATIVLGVAVLAIILGFSSTYTLSEHEQAVITRFGQPRGQSITEPGLHFKQPFVDTVNRFDKRWLDWRGDPNQIPTKDKKYIWVDTFGRWRIVDPLRFFQRLRDERNAQSRLDDIIDGETRNTIASFALIEAVRSTNRPFEDDEYTTEEERGESQEQVAQGRDKLTRQIRLRAAEIVKEFGVELVDVQIRRINYVDEVQVKVFERMISERRRTAERSRSEGMGRAAEIRGQRERDLKEIRSEAYRKAQEITGKADAEATRIYADAFGRDAEFYQFMRTLEAYPQVMDRSTSLFLGSDSEFYRYLRSSKK
>NZ_CP006003.1|WP_052771267.1|9300405_9303783_-|hypothetical-protein
MSFNSLFLASALTLAFVPGCQDAPPIDPTPEPLGTVSQGLTCGGSLIPVMSARDNPVSGLVIASSEFNASNPAWHAVDGGDSTMWLSASGQSTAWLTYEFFDGARTLSHYAIKFSNGSLNNRAPRDWTLQGWSGSAWNTLDTRTQQTNWGGSEEREFSITTPGTYSKYRLMVTEDNTAGTGVDVLSIGRLSFYNCACAAIVNQVPAMTSATAPSGTVTGSGFLQAGNEPWKAFDNVDTSASMWLSSKATSSWLAYEWPGAARVLTRYALKFPNGEATTRAPKSWTLQAWNGTAWVVVDTRVDEFNWTSAERREYPLSLPRAFNRFKLDITDDNDPRTGVETVSLARVELLGCERDTTPPIVPSFSAFTPASPGNQTAITLNGVTEGNATVRLFAGGTCAGSPIATLTASGSGAFSRALTVTANTTTTFSAKAEDLVGNVSACSAPVSYTHDNVAPVTPFQLAFVPSATGTVLNPQLDGRTEAGALVLVFRSANCAGSPPTSTTAHATTGVFSLNPTVFANTVTNFSVRAVDAAGNLSACTSVAYTHDTVAPPAPTFTAGLVPLSQGSIVAGMRIQAEPRSRLFLFWGNDCANPTSTDVAVDSSGSALLPLVANQVGVPMSFRLRDMAGNLSPCVAVEETCFAGFRDCDGDPVNGCETSVVDDAANCGACGTVCVGAASASGVCGAGTCGLACAVGTFDCDGSPLNGCESSTACAPGVCQVSPENELLITALPVVEDPVRTVNGGAWTFGTLMRRMNGGQNPSELIRTWLKTWETNQVIAGMPVAGRPSMLPDVLTPWETRSGGPSAPLDFNTAPFRLLAIVNRIDLRSEGTHSGEGRFVFGVTTPSGLDLPFTVILEYLLPGDGPEDIQRWARDWHELGSLPLGSPLYNAKLQALTDRFTEPFVAQGRFMGSAIHQVRTNENALNPLWELREFHFGPNGLVPSPVALTPELSLNNSPRLASFVQENTAAILAGTHEVPSLYQGQAFVAGSAMTPFGLTWSVPGADPEVRHRFSLNTCNGCHAGETQTPFLHVFPRSAGAPAFLSPFLVSAQPVPDPLTGTPRVFNDLGRRDDDLETLVCGAPQALAPSLGAVGEGLLTPRSLSGSKPDAVPGFPPRSNLPPGRVH
>NZ_CP006003.1|WP_046718484.1|9303939_9304644_-|hypothetical-protein
MMAYNVLYSSPAEDIDKSLEVIEKEAPEVLCLRELTPGFAAAFRKRLGKDYPHLKLMPRKGGWGVGLASRHPLRRVERFPQKPHRMPGLEADVVVGGRTLKVACLHLMPPGASHRQEDSLLEMLRKNATLRKHQAEALVKRYAKERGPVLLFGDMNESRTQEAMTTFAAAGFTHACDGPDALCGDTWPGAASVVPSFVEIDHILGRQLSLSGAKVLHGGGSDHFAVRASVALPP
>NZ_CP006003.1|WP_082165424.1|9304925_9305861_+|HNH-endonuclease
MSPDSDWPIRVAAINALQERVRRHGDVLPWEVIDAGFTYKGETLHFANRARGIFWPRQMRETALSIKTTVPRQGREARYDDLPSDEGFDYRFQGEDVDGRDNRRLVRAMELDAPLIYFYGIEPGLYAPIWPVYISGVDLATKSFTVASGLPEAQVRAPGSYAADSKLLGLERRYTTVQVKKRLHQVAFRQHVLRAYEQRCAICRFPRRELLDAAHILPDRDVRGRPEVPNGLSLCKLHHGAFDTDLLGIRPDGVIEIARRLMAEQDGPTLEHGLKGFAGKPLGVIPLLPAQRPRSDYLEERYERFRLTRDA
>NZ_CP006003.1|WP_046716095.1|9305986_9308200_+|hypothetical-protein
MSHPSSSRLRGVLGITLGLLLSAGCGQQEQGVDNPAEGRHEAAISRTRPRVKLAANRRHSLAIRSDGTVWAAGQNLRGQLGQPGTASTATPVQVPGLTSIISVATGDYHSVALRSGGTVWTWGDGTHGILGTPDFPYGPVGFRATPVQVPGLTGVVAVAAGDMHTLAVKGDGTVWAWGFNLEGQLGDGGLDSSRYAPAPVPGLTNVVAVFARHRTSCAIRSDSTLWCWGINQFGMLGLGNTQYTSMVPVQVPGLTNVVAVSIGPRHTLAAKSDGTVWSWGMQDPTNHTFHLSPVQVAGLTGVTDVSAGLDTSFALKSNGTVWSWGENTQGQLGDGTKQRRDTPVQVSGLTGVSVVAGGETHALALRSDGTIWTWGASHEGERGDGAVTLYPLPGLIPLTEPALAVAAGAAHSLLLSSQGTVWSWGSNEAGQLGDGTTSRRVLPAPVAGLQNIIAIAAAGRTSLALRDDNTVWAWGGGTLTPTQVPGLQDIIAISTSATHRLALRDDSTVWAWGDNTHGGLGDGTLVSRTTPVQVSNLSDVMKVVAGPHTSYAIRYDGSAWAWGRNDNGQLADTTTTQRRTPVMIPGLSNVLSIGGGNSHGMALLADGSGWSWGLGASHAGLGLSSPSNYSPRPMAIQGLLEVVTSEDASAAIAITGEVWTGGSTPWGQAGNGSWSGNGAPVQVSGITSGVTSFAVGGEHMLVVQPDGTVWSWGSNSDGQLGRGQPFDAVTPIPSLLD
>NZ_CP006003.1|WP_046716096.1|9308263_9309748_-|ammonia-forming-cytochrome-c-nitrite-reductase-subunit-c552
MTEPQKAPGKRRRFSGVRLVVAVAVAAALASAGVTALLVNIMERKQEARNPFYRVVELDDTITDPAVWGKNFPLQYDSYKRTVDQQRTRYGGSEAVARTPTKADPRSVVAQSRLEEDPRLVTLWSGYAFATDFREERGHAHMLEDQVFTERQHVTAQPGTCIHCHGSVYVPYKKLGDGDLIKGFEKMNQMPFAEARKLVDHPVSCIDCHDPTTMQLRVTRPGFIEGIAALKASQGVPDFKVNEHATRQEMRTYVCGQCHVEYYFKGKEKRLTYPWAKGINIDQIMAYYDEDGHTDWTHQLTGAKVLKAQHPEFEMYNQGIHAKSGVACADCHMPYQREGAMKVSDHHVRSPLLNINRACQTCHKWSEAELLSRAETIQTRTFETRNIAMDALVDLIHDLQNAQKAGASDEALAKARDYQMRAQFYLDFVEAENSMGFHADQEAVRILSNSINFSRLGQNALRPEGGASTAPDTRPQGAPKPVSPAAEGTQQGSR
>NZ_CP006003.1|WP_046716097.1|9309744_9310287_-|cytochrome-c-nitrite-reductase-small-subunit
MRIARLRGVLSAPRTVLAVSLGIALGVAVGLGGFTFVYAKGASYLRDDPAACANCHIMNEQYDGWRKSSHHAVATCNDCHTPAGLLPKYYTKASNGFWHSYYFTTGTFPDPIRLRPGNRVVTENACRKCHASIVEAIETPPAGHEQVAPGEQLQCLTCHNSVGHPEGSGNPELIRQEIAR
>NZ_CP006003.1|WP_082165425.1|9310636_9312733_+|glucose-dehydrogenase
MTRRPPPVAASRIILAACLITLAACEATPEQGGSELESQSAAVTAGTRLISAQSGRCLDVSQNSQTSGQGLNIYDCHGQGNQRFLFTPEGELRVFDGAWCVQPATATAGARAVISACTGAAAQRWVRNANGTVVHTASSLCLDVSGGATANSSPVIVWDCNGQTNQQWNLPADTQPPTVPTGLVVTNLTCNTATLSWAESTDNQGVAFYDVYHDGQLMKSVSGAVLSTGLTVVPGATWGLYVNARDAAGNVSQGSATLSITPPPCQVDTQAPSIPTGLTATATGTSVTLNWTASTDNVGVSAYVVFRGGVQVATVPGTPPATTFVDSGLSANTAYVYSVLARDAQGNASARSTTASVTTGQACTNPVCSVTQVATDTDIPWGLVSLPDGAVLYGRRDAQDIVRLDPVTGQKTSVGTVPNVQSTDGEGGLMGIVLSPGFATDRWLYVMHTSPTDNRIVRLRYENGALNTASLQVLLQGIGRNKFHNGGRLRFGPDGKLYAATGDAQNAAYAQDLNNLAGKVLRLNADGTVPSDNPFGNYVWSYGHRNPQGLAFDSQGRLWEQEFGNSVMDETNLIQRGGNYGWPNCEGTVSQGGSGCATPGYIAPKQTYTTAAGSCSGIAVVRDVLYVACARGTRLYREVISGTELTNVQQFFVGTYGRLRTVEPTLDGDLWLTTTNQGDKDSIPNNSNERIFRVVLGQ
>NZ_CP006003.1|WP_046716098.1|9312882_9314406_+|hypothetical-protein
MRWHPPSLLAAVLSLVALPAWAQTTNVALNKPSTASSIHPNGYPTQFANAKAFNGILNTEDRWAGASVPSATTPEWIEVDLQAVHRIEGLTLYSGRDNTVGQQMLDFDLHHRLATTAAFEPVPGGSVTNNTQPTWTLTLAQPLETRYVRLSCKRASADGLCRVRELELRGVRLANQPPTAFAGNDTAIVQPASSVQLQGTASDTDGTITGYQWQQAFGPTPATLTGATTRTVTASNLTAGTYIFRFTATDNGGAAVSDTVSVKVHAGTQPADTRAGKIHVWSRGGTYDTAVFLPIEYGADPLKKYPLVLSMHGKGGTTLSSDHTTVLSNPEGFIRQLIPGKAIVTTYPAVVIAPHGPAIGATPPYNTYFNDDLIHALVLQAITRFNIDPDRVTMTGLSFGGAGVNDQLLKYRSTYAGGMPLAYTSPVVTPLCSIADFPLWASGNSGDGTFNAWKWTNPTDGVLTQLRQCPNYTGEIQVTVTPGTTHSGWDEFWSRPDAQTWLVSQVR
>NZ_CP006003.1|WP_046716099.1|9314436_9314673_-|hypothetical-protein
MTWNTGETSTLVQTRVAVQGAGALVTVTHFGSVSSGKFAGATTVRVTEFLNTDLDACYTSGGLARLSGPSTLTVLGLL

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Crispr_ID: NZ_CP006003_27

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP006003_27

9626837-9626961

Orphan

Consensus_repeat	Method
GTTCGACGCGCCCTGTTCGCCGCCCTGTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP006003_27

>merge|NZ_CP006003|27|9626837-9626961|CRISPRCasFinder
GTTCGACGCGCCCTGCTCGCCGCCCTGTTGTCCCGCGTTCGACGCGCCCTGTTCGCCGCCCTGTTGCCCCGCGTTCGATTCGCCCTGTTGCCCTGAGTTCGACGCGCCCTGCTCGCCGCCCTGTT

>NZ_CP006003|27|25|9626837-9626961|CRISPRCasFinder
GTTCGACGCGCCCTGCTCGCCGCCCTGTT	GTCCCGCGTTCGACGCGCCCTGTTCGCCGCCCTGTTGCCCCGCGTTCGATTCGCCCTGTTGCCCTGA
GTTCGACGCGCCCTGCTCGCCGCCCTGTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP006003.1\|WP_046716313.1\|9636659_9637094_+\|biopolymer-transporter-ExbD	unknown	unknown	gnl\|CDD\|223917
NZ_CP006003.1\|WP_046716299.1\|9614020_9615337_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046716300.1\|9615358_9618124_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238119
NZ_CP006003.1\|WP_046718529.1\|9625142_9626093_-\|ATPase-AAA	unknown	unknown	gnl\|CDD\|285027
NZ_CP006003.1\|WP_046716308.1\|9632479_9632770_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046716307.1\|9631397_9632393_+\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381300
NZ_CP006003.1\|WP_046716310.1\|9633843_9634278_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046716302.1\|9620029_9620878_-\|DUF58-domain-containing-protein	unknown	unknown	gnl\|CDD\|376643
NZ_CP006003.1\|WP_046716303.1\|9622412_9623387_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP006003.1\|WP_046716301.1\|9618120_9619851_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377873
NZ_CP006003.1\|WP_082165454.1\|9628045_9630013_+\|glycosyl-hydrolase	unknown	unknown	gnl\|CDD\|200464
NZ_CP006003.1\|WP_052771292.1\|9623383_9625138_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046716306.1\|9630902_9631385_+\|DoxX-family-membrane-protein	unknown	unknown	gnl\|CDD\|226720
NZ_CP006003.1\|WP_046716311.1\|9634491_9635769_+\|glucose-dehydrogenase	unknown	unknown	gnl\|CDD\|369642
NZ_CP006003.1\|WP_046718527.1\|9620892_9622380_-\|ABC-transporter-permease	unknown	unknown	unknown
NZ_CP006003.1\|WP_046716305.1\|9630024_9630852_+\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
NZ_CP006003.1\|WP_046716298.1\|9612103_9613786_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224720
NZ_CP006003.1\|WP_046716309.1\|9632870_9633833_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046716312.1\|9635942_9636656_+\|MotA/TolQ/ExbB-proton-channel-family-protein	unknown	unknown	gnl\|CDD\|223881
NZ_CP006003.1\|WP_046716297.1\|9610780_9612094_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP006003.1\|WP_046716313.1\|9636659_9637094_+\|biopolymer-transporter-ExbD	gnl\|CDD\|223917	COG0848, ExbD, Biopolymer transport protein [Intracellular trafficking and secretion].	4.10878e-30
NZ_CP006003.1\|WP_046716305.1\|9630024_9630852_+\|AraC-family-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	3.55294e-19
NZ_CP006003.1\|WP_046716300.1\|9615358_9618124_-\|hypothetical-protein	gnl\|CDD\|238119	cd00198, vWFA, Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A domains.	4.93612e-13
NZ_CP006003.1\|WP_046718529.1\|9625142_9626093_-\|ATPase-AAA	gnl\|CDD\|285027	pfam07726, AAA_3, ATPase family associated with various cellular activities (AAA). This Pfam entry includes some of the AAA proteins not detected by the pfam00004 model.	5.9252e-81
NZ_CP006003.1\|WP_046716307.1\|9631397_9632393_+\|aldo/keto-reductase	gnl\|CDD\|381300	cd19074, Aldo_ket_red_shaker-like, Shaker potassium channel beta subunit family and similar proteins. This family includes voltage-gated potassium channel subunits, beta-1 (KCAB1B), beta-2 (KCAB2B) and beta-3 (KCAB3B). KCAB1B and KCAB2B are cytoplasmic potassium channel subunits that modulate the characteristics of the channel-forming alpha-subunits. KCAB3B is an accessory potassium channel protein which modulates the activity of the pore-forming alpha subunit. The family also includes Drosophila melanogaster Hk protein, a founding member of aldo-keto reductase family 6 member B1 (AKR6B1), as well as voltage-gated potassium channel subunit beta (KCAB) from Arabidopsis thaliana and Egeria densa, founding members of AKR6C1and AKR6C2, respectively. Hk protein, also called hyperkinetic, is a beta subunit of Shaker (Sh) K+ channels and shows high sequence homology to aldoketoreductase. KCAB, also called Shaker channel b-subunit, or K(+) channel subunit beta, or potassium voltage beta 1, or KV-beta1, or KAB1, is a probable accessory potassium channel protein which modulates the activity of the pore-forming alpha subunit.	3.3196e-171
NZ_CP006003.1\|WP_046716302.1\|9620029_9620878_-\|DUF58-domain-containing-protein	gnl\|CDD\|376643	pfam01882, DUF58, Protein of unknown function DUF58. This family of prokaryotic proteins have no known function. Caldicellulosiruptor saccharolyticus PepX, a protein of unknown function in the family, has been misannotated as alpha-dextrin 6-glucanohydrolase.	8.89297e-13
NZ_CP006003.1\|WP_046716303.1\|9622412_9623387_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	9.87469e-92
NZ_CP006003.1\|WP_046716301.1\|9618120_9619851_-\|hypothetical-protein	gnl\|CDD\|377873	pfam07584, BatA, Aerotolerance regulator N-terminal. These proteins share a highly-conserved sequence at their N-terminus. They include several proteins from Rhodopirellula baltica and also several from proteobacteria. The proteins are produced by the Batl operon which appears to be important in pathogenicity and aerotolerance. This family is the conserved N-terminus, but the full length proteins carry multiple membrane-spanning domains. BatA ensures bacterial survival in the early stages of the infection process, when the infected sites are aerobic, and is produced under conditions of oxidative stress.	1.11078e-09
NZ_CP006003.1\|WP_046716306.1\|9630902_9631385_+\|DoxX-family-membrane-protein	gnl\|CDD\|226720	COG4270, COG4270, Predicted membrane protein [Function unknown].	1.094e-21
NZ_CP006003.1\|WP_046716298.1\|9612103_9613786_-\|hypothetical-protein	gnl\|CDD\|224720	COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane].	0.00183494
NZ_CP006003.1\|WP_082165454.1\|9628045_9630013_+\|glycosyl-hydrolase	gnl\|CDD\|200464	cd11325, AmyAc_GTHase, Alpha amylase catalytic domain found in Glycosyltrehalose trehalohydrolase (also called Maltooligosyl trehalose Trehalohydrolase). Glycosyltrehalose trehalohydrolase (GTHase) was discovered as part of a coupled system for the production of trehalose from soluble starch. In the first half of the reaction, glycosyltrehalose synthase (GTSase), an intramolecular glycosyl transferase, converts the glycosidic bond between the last two glucose residues of amylose from an alpha-1,4 bond to an alpha-1,1 bond, making a non-reducing glycosyl trehaloside. In the second half of the reaction, GTHase cleaves the alpha-1,4 glycosidic bond adjacent to the trehalose moiety to release trehalose and malto-oligosaccharide. Like isoamylase and other glycosidases that recognize branched oligosaccharides, GTHase contains an N-terminal extension and does not have the conserved calcium ion present in other alpha amylase family enzymes. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase. Glycosyltrehalose Trehalohydrolase Maltooligosyltrehalose Trehalohydrolase.	1.19596e-145
NZ_CP006003.1\|WP_046716311.1\|9634491_9635769_+\|glucose-dehydrogenase	gnl\|CDD\|369642	pfam07995, GSDH, Glucose / Sorbosone dehydrogenase. Members of this family are glucose/sorbosone dehydrogenases that possess a beta-propeller fold.	1.01812e-160
NZ_CP006003.1\|WP_046716312.1\|9635942_9636656_+\|MotA/TolQ/ExbB-proton-channel-family-protein	gnl\|CDD\|223881	COG0811, TolQ, Biopolymer transport proteins [Intracellular trafficking and secretion].	5.10486e-35

>NZ_CP006003.1|WP_046718529.1|9625142_9626093_-|ATPase-AAA
MANQLKARLDTVMLDQQTVVEQVVMAVLARGHVLLEGLPGLGKTELCKSLAKLLALPFRRIQFTPDLLPGDITGTYVLEGEGRRDFVFREGPLFASLVLADEINRSSPKTQAALLEAMQERRVTVLGHTRALPDPFFVLATQNPIELEGTYPLPEAQLDRFLFRIQVPPVGAKTLRALLTTRVRGAPPELSSVLDAEGLARLFAAVDRVHLPGPVADFIGRLVEASDPRQSSAPEAVRRFVRYGASPRAALALAAAGRARALMNGRPNVGFDDVVAAAPAALNHRLVLAYEASLEKVSSSDVVGALLQAVPEVPRD
>NZ_CP006003.1|WP_052771292.1|9623383_9625138_-|hypothetical-protein
MVLSMWLFLGTSPPTVETAAPVDIATAAAAVKSPVGYRDASGSVDSLVQDYLRVTVRRGSLKPQRGYWAAEVTLHNGDAKPHPVHLSFRPSYGDVTHSVVRTVELAPRQRLVTWLMAPVAWHSGALTVEIPGLPPITEHLFPDNDRFEPVLVVGNSESFEAATGLSKTPEQEDPLFSVRFIDAQEAPRELAAYAGFEMVVLTEAATKVPADVWAVLESYALSGGRLVVANPPRDLRERLQLLQSVPLQDAPYAFGGVWTCDNSAATCRNKIQSELSTVTDDNRGKTRPQGLRSRWASKVSFGDDEAPLLGTARAPVGPFLLLMTAFALLVGPGAWWLTKRRGPVAVLIAVPAVSLVTCVVLIAWSVLVDGFAVHTARYSLTYLDGARARAVTVGLSGWYANLSPEPLRLPSSSVLIAPHDTEDLMADLDWTGGLTVGDGFLPPRTYREWGELAVVPSRARLVLVETGGEPKVQNALGIVVEEGIVRWKGQVRRLPRLADGEEGALGPPEPDPSPSQGNAADTLLESSLGAPAQYRLKAALPLFRRDLKEQEFVVRTSGPGPLPTSAASAEVEASVHLIRGEVRP
>NZ_CP006003.1|WP_046716303.1|9622412_9623387_-|ABC-transporter-ATP-binding-protein
MSPLLEVKGLRRDYGALRAVDDVSFKLEAGSILGFIGPNGAGKSTTLRILATLDAPTSGEVLLGGHSLVDTPDKVRPLIGYMPDRYGTYDDVTVFEFLDFFARAYGLTGAKRRQRVESVMGFTGLGPLADKLTTALSKGMRQRVALGRTLLHDPQLLLLDEPADGLDPRARIELRELLRALADQGKAVIISSHILTELAEICDTCAIIEQGRLLATGKVEDLLQQDSNLASVELTVRLATGPESEGAWSRAERLLLEQPRVSRVSKEGESLRVSLELEPGTGADVASAALLAVLVTAGLPVCAFGMRERNLEDAFMTVTKGRLA
>NZ_CP006003.1|WP_046718527.1|9620892_9622380_-|ABC-transporter-permease
MAEPTGGAAAASGGGFQARWGDRLNPLVVKEVRQGFRTRIFWACFGLMLLSCVVLALVAFVQTRDAAFSQFGQTYFFAFFVCLAVVHFFVIPYSAYRSLAREREDDTWVLLVLTGLGPRRILRGKVLSFLVQAALYASAVGPFLLFSYYLNGIALPTILVVLGLSAAWLVFLTVVAVGAATLADSRMGRGLVHFVVLGALGLAFAMALGIASALTDAADRLLHTDGVLLAMSICLGLMILDGWLLFEVAASRLSLSTEDYTRGPRRAVAAQMGVALLAGLVLWWVDDKKHVVTEVFATLGTVHLTLVSLFMASDVDGQARALRADTGRWSLMRPGALRGFRLAVLLLVGWNVAWFLAAVFSEHTSSRSEPYRMVMAVMPAYSVLYLSLALLLGRMSKSDRFSSPAAVRLLFVATVGVAAGLPPLFAEVVGLEAGDSLINLLNPVVGVANFSSHDYSTGLPEMSWAMVGFLGGLALLCAFLADRVLTEREKRAHRL
>NZ_CP006003.1|WP_046716302.1|9620029_9620878_-|DUF58-domain-containing-protein
MDEAGVGRLAPGLALALPRGPHRGRVGEVRASSMGSSLELHDFRAYQPGDDLRQLDWNAVARTDELILRVRQDEVSPRVEVVVDGSRSMALSPRKAACAKEVALLACEVAARQGLSPTLLTTAVHAERMQGAGCRAVLRALEFDARDDLATALGRLPPPRPCGLRVVVSDFLFEADLPALVSRLSRGAAGCFLVQVLDEEDLSPSGGDGARLVDSESGAALEELLTEDVLAAYARRFEEHQRLLRGAALRARGLLVTAPATESLAALVAGPLHPLFVAGGGA
>NZ_CP006003.1|WP_046716301.1|9618120_9619851_-|hypothetical-protein
MSFGFPWGLLALGALVPLVAAYFLRRRQKPVVVSALFLWRTPSPRAEAGPRWERFTREVSLLLEMLAVIAAALYLADVRLGESARSRHLVLVVDGSLSMSARGPDNVTVLELVRREAARRVETAKATRVTVLATGMTPRVLAGPEAEPSRALAALETFNALGADHDPIPTLLWAQELAGPGKHVDFFTDAPPAEGLVVPAPVRWTALGTARDNVALVSAQRKDEGGTSTVTLRVARFGVNPDSVSVRMTAQPGVGAKQGTSRAETVSFKDGETATVRVSFQAAGEVSVFIEPDVLPEDNRAKLPVSSTRPLAVRLAQGLGPLERGALERFVSAIPDLSREATEGDVLLIGPQGTDARVTVGATGKPRTFVGPFFSEKGHPLLDDVQLAGVRWSAGENPPGRPLITAGEAVLVSEGEDGRVHLNIDLARSNVQRVSAWPVLLGNVVREARRSREGFARRQLSLGEPLQVVTLPGERYTLVGPEGERPVFGAGAVSLPPPSSPGRYELERDGEVVDAAVVLTMDARESDLRGRGSVDIPARESGEDEAGAGASERMRWPLVLLLLALMGDFYVTRRVS
>NZ_CP006003.1|WP_046716300.1|9615358_9618124_-|hypothetical-protein
MTFTLPQAWMLLIPLGLFLWKYGRRPGPPMYLRATLLVLVVGALSGPSCHREDAGSDVVVIVDRSASMPRDVDRTAQELVSHLESQRRPGDRVGVITFGREARVEQPLSSVGAFGGFSRPLDSEASDLSAALDAANVLIPQERTGRVLVLSDGRATGTDARGAARRLAARGIAVDWRQLARPEPALDVAVVSLDVPTSVATREPFQFSAQVYASAAVTGTVRLERNGRVLVKGPFDFLPGPNVLPLRDLIEEPGLARYQLTVEVPGDGVVENDKGLAVLRVEGPGRVLLLTHQPKGTLAQALQATGLLVDVRAPFRPSLDDLDGVGSVVLENVDANLLGEPGLNALASYVEQAGGGLVMTGGRESFGEGGYRRSPIEPLLPVSLEMREEVRRASIAISILMDCSCSMGVTVPDGRTKMEVAAEGVVAALSLLNPQDEASVHMIDTETHEIFPLCSVQAGLPFDKVAQGFSGGGGIYVGEALRSGRKQILQSDKATRHVLLFSDAADSEEPDDFRRTLEELQSKSVTVSVIGLGTPKDSDAKLLMEVAQRGGGRIYFAEDAMSLPRIFSQETLAVARATFIDEPVSMEAAPDLPLLGRLPSEGLPQVGGYNLTYLRPQANVALRTLDTHAAPILAMWPRGAGRTVAFTAEVDGPFTGELRQWASLRATLEAMVRWTLAGSSPLGEAVVRSERRGHLLRVTLDLPPEAPLPGTLPSMMLLAGDGKSEPVEVPMRWEDDDRLVAELPLEGSGTWHPVVRVGTRALRAPPVALPYAPEFEPGSPKEGLELLRALAAVGGGVERLSMTGLFAEAPESEGQLALAPWLVSLAMLVLLAEVAVRRFLSAPRQRVVAATSQGTVTPRGAAPGVTMPAPDSTRGALESPTSTSSTPEPKTDTSGAKPSGEGGVDSALEAARARSRRRLDR
>NZ_CP006003.1|WP_046716299.1|9614020_9615337_+|hypothetical-protein
MSQHHPWGALRSAIARSCLGAVGAVALVWGAVAPGSAQAALQYPPMDLNAHCVQRYGSGAFATLTANNAYGWSCYKNGQYLGMDLNQACQTQHTNGFQAAYRNFNDAYSWYCQLRANYTSQKGQVHSLFVWKGQYVALRTPDTTTCDVNRIAMLVDGFDRGYQFYSDVTGRTPSLFRHYQNLDSMAVLPSGYVTGCASASDPACGEIAQTGIEFKYDLYNANICTEAAMSLHNQVGFYELGRNFWFYSGQLSSTNSNYAHAMTTGYAVLMRFLSMEYTGLAVSSNHATLHTNVKKLVDTYASATVACGTAGATSTPTPSNSSLCYKHDWTNTLLANQGLNSLGTTDLFASFVMRLKRVHNWAFVFQLWRKVGALSSVTSPYSSADNFVLAASRAANVNLSDVFADAWRWPLSSSVRITLQNEFGNPVSTAPYLVPEPP
>NZ_CP006003.1|WP_046716298.1|9612103_9613786_-|hypothetical-protein
MTDARWTRVALGLGLLGLGVLAARLALHKAFSIDEFQYAHAAWLVSKGQVPYRDFFEVHFPLVYQGLAPVFWLLGDSPKVVLALRAAMLVPLLGSCVAVAVLNRREGRAVSWLGPVLLLSCVPFTRFATEIRPDALSTALFLGALAALSVRPGTRWLGFVAGLSYVAALWASQKVLFFGGAVGAVLAVDLVARRGRAPALVAHPGMFLSGAGVGLAAVAAYLTVTASWSAWWQWCFVWAAEHQRHYPGFSPWDYLGPVLREQPWLFGLAGLGVAATVRRWWSRGPERWADADLPLLLAAVATFGSYALQRAPFPYSLLPWLGVLSPFMARGVGFLVEHVRARVALGVALGVLVCLQMWRLESLLDGDGNARQREVLERIATLTGPEDVAYDNSGGYVSRPHAHFYFYTDAYLRGAIPDQLAREVPEALVEKGCVLRVDDLRTSGLPPGLRGFLDTHYQPYDGDLFLWGRRYDVTNGDRLEDRFLAVRQGRYFVEPASVLETGALFIEGQRVTQAEFVLERGEHPVRYEGPAERFHLLWLPRDGRRWTPRPDARPTYSRLF
>NZ_CP006003.1|WP_046716297.1|9610780_9612094_+|hypothetical-protein
MHMPCSMWPKRLVVVSLSLVVLGGCSSSDDDGKTPAADGGTNNPDGGGTVSGDCLGETFLESLGEDRLLVGAQMEDDTAAGAPFDVHYLYIASGLVDSNNVCTSCTSGCNAGGSSCANGACAWWGCWQDLSQPPGDYIRGFVSRAAGRQQLPFITYYQQLLGSVGPSGEGEQQLTALNDAAVMRRYFADYRFTLQQVGSARALLHLEPDLWGYLQFFSNGNPDSVPAQVASANNTDCAGLANTASGLSRCMIAMARKYAPNAKVSLHASPWSTRVDVYLNTNASFDIAAEARKVADFLSKLGAADTDFIVVEASDRDAGFYDSIGEETWWDVDNRKLPHFRQAFTWAAAISERLGKPNFWWQLPVGNMSLPNSNTRWKDNRVDYFFSHTAELAAAHSVGFSFGAGEGRQTSPETDNGNLASRVRAYKQAGGQVPCVK
>NZ_CP006003.1|WP_082165454.1|9628045_9630013_+|glycosyl-hydrolase
MSTRETKSNEVRQPRKDFSETACRSRGNEVARRTARSRSAPELFGPAEQLQVPGALTAFVPVEAQPEPSWRPGMGVIPYDGGATFRVWAPHAQRVQVVGDFSHWHAVELAREPSGNFSRDIQGAYNGQQYQYIVQGRYGDWRWRNDPRAADVTNSTGNSVILDHRDFVWRYDGHFQMPARHETVIYELHIGTFHDSPGWGPGHWLSAIDKLDYLRDLGVNLVELMPSAEFAGDFSWGYNPTFPFAPESTYGTPNDLKRFVDEAHRRGIGVIMDVVYNHLGPSDLPHWDFDGETFGRGGVYFYADWRASTPWGDTRPDYGRHEVRDYLRDNALMWLREYHMDGLRVDATKEIRTTSGVDNPAGWDLLRSITEAVKREFPWKLLIAEDMAADPAVTHPQGAGFDAQWDAAFVHPVRAALTAPFDEWRDLSAVRDALYFRYNGQSMQRVIFTESHDEVANGRSRLPTEVSPYNPGDVLAKKKALLGAALTLTAPGIPMLFMGQEFLEDGHFDDGDPLDWNKSDWFGGILQAHRDLIRLRRNWHDTSAGLRGEGVNVFHLNHDDKVLAFHRWQHGGAGDDVVVIVNLGHRTFSGYELGLPSDGLWRVRFNSDWQGYSPDFGGTHVHDFWSTWGERDGMPARGAVSLGAYSAVILSKDRW
>NZ_CP006003.1|WP_046716305.1|9630024_9630852_+|AraC-family-transcriptional-regulator
MLLARPPDLAPRAPWPDMPLVVWPAALAMWGPGDMSSKHAHHAMHLMLCRTGTLSIRVDSAKKDTRAAGVLVGPDVPHALDARGTEVVLLFVEPESHDGLRLRASLTESVRLFDEAARDALLASLPREGPIPHAAIGPWMESTLEALAGPTTTSAPRMHPRVRKLLRHLRSDPAPEDTSLEALAEVAGLSSGRLMHAFTESTGVPLRPYLLWLRLQRAAGAIASGRTAGEAAHAAGFSDSAHLTRTFRRMFGTTPSFLQRRSQFVQAQAKAPDAS
>NZ_CP006003.1|WP_046716306.1|9630902_9631385_+|DoxX-family-membrane-protein
MSFALVLLSFFALFHLPPLRRLPALSTPASRAAVAAGLFFIGAGVMHFLMPARYDAMIPPQLPSPRFWTLLSGVLEVAGGVGLLLPRTRRLASLGLIALLVAILPANIHEAAANSASHVLPFPDWYFWLRLPFQLVYIAWVAWAGGLLPSQSRARRAMAG
>NZ_CP006003.1|WP_046716307.1|9631397_9632393_+|aldo/keto-reductase
MNFRHLGRSGLAVSEISFGNWLTHGSQVEEDAALACVKAAQDVGITTFDTADVYASTRAESVLGRALKGQRRAGYELFTKVYWPTGPGKNDWGLSRKHIMESIHGSLTRLQTDYVDLYQAHRFDTATPLEETMVAFADIVRQGKALYIGVSEWTGDQIRQGAKLARELKIPFVSSQPQYSMLWRVIEAEVIPASLDEGLGQIVWSPMAMGVLTGKYLPGKPPPAGSRATDPTGSRFIARFLKEDVLTRVQNLKPLAQEAGLTMAQLAVAWVLQNKGVSSAIIGASRPEQVHDTVKAAGVKLEPELMRRIDEVLGPVIERDPSLTDVPDRKI
>NZ_CP006003.1|WP_046716308.1|9632479_9632770_+|hypothetical-protein
MRWFVISAILFASSASAQTPECKAAKKEYVEREGQLTTLKQARKDMREVLVAAKKGRAHSRALDALEKADDAMEDAVKRATSEQAQRDKLTKEICK
>NZ_CP006003.1|WP_046716309.1|9632870_9633833_+|hypothetical-protein
MDPLFKAQAIGMLLLWIPLLAGFFVGRWVYPKLLRLLPAFLPLARSRSSTFMTLVNVTLFAVAMVLTTGMLAAKTLVWLQGLTFLPFTPTAGGVRALSWFAAFFCGYHAAPLFGRAALENVDMHEPASLPPLPGPRKQPSGWWVLVLLCFILAAGGGLAAVAIGLQKEGFLRTSDVGDLAELASVQEQLRPLEACSIEYKRWDARGRNRYPEAVSMQDCDSNTHGTLRIKVPQTWLEQGVGFTMQRGSTSEPWEILVDKDVVPFPALKEALEAFAPIIAAEYPVQLRKELESEAVSRRNWEEYRRQRDAPKPSAKSSYPE
>NZ_CP006003.1|WP_046716310.1|9633843_9634278_-|hypothetical-protein
MLLEDSRMSNKPPDDDSWRSVPPPPRPPHMPESPARDPRIPEGSADYSSALADSAAYKRGDIAFEELQRRVLARALPPHHLGDAYLMMTPPPPPPGMLSSFNPLRMPGDWRGTWGEVAMTLFAGDITHAEYERLHAAAHPDCRR
>NZ_CP006003.1|WP_046716311.1|9634491_9635769_+|glucose-dehydrogenase
MRLCLSLSSLACALSLSLTGIAHAQSAAPPPAQTATPAEPPQSPQGAAALASPFPPAFPGQTNGPVVVSQTSYKVTQIANGFNYPWAIAFLPDGRMLVTEKPTGKLYIVTQQGVKSAPVAGLPPVDGRGQGGLMDVEVGPDHAESRYIYWSYYEPREAGNGRPTAGNGLAVARGKLVDGPQPRVDALQIIFRMKPTLDSTLHAGGRIVFHPDGTLFVTLGERSILPGRVQARQLNSHFGKIVRIFPDGTVPSNNPFYNQVGARSEIFSLGHRNILAAALDSRGRLWEAEMGPLGGDELNLVERGKDYGWPTIGYGTEYSGAPIHQSGQGPGMEQPVYFWNPVVSPSGMTIYSGNLFPEWRGNIFIGALSGHALIRLVIQNDRVVGEERLKPAGNGRVREVVQGPEGALYLLTDDPNGRLLKMTPQ
>NZ_CP006003.1|WP_046716312.1|9635942_9636656_+|MotA/TolQ/ExbB-proton-channel-family-protein
MTLPPILLAQSGHSELGWLSSKLLGVTLTSAEWVLWILVVLSVLSIAIMLERAVYFARHRLPDSEALAVRLAKGDFDAGRKAIEGKTGMEAAVIREALAASAQGADTVEQVIASTVARERPQYERFLSFLGTLGNNAPFIGLFGTVLGIIKAFNDLGASNVKGAAIQQTVMAGISEALVATAVGLAVAIPAVVAFNIFNRQLKTVTSRTNALGHALVGSMRASGRTPDTAARAAEVR
>NZ_CP006003.1|WP_046716313.1|9636659_9637094_+|biopolymer-transporter-ExbD
MAGGAQDNEEEITGINVTPLVDVVLVLLIIFMVTANFIVRETVEVDLPRAANGGETVQGLVNVVLDKEGKLYFDGAAVTEPELTTKVAEAVAKDKDTRAIISADQTIAYGQVMRLIDTVKGQGIAKFALNIEKDVAPAAAPATP

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Crispr_ID: NZ_CP006003_28

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP006003_28

9683342-9683474

Orphan

Consensus_repeat	Method
GTCGACGCGGAGATGCGGGAGGCGGACCCCGTCGCGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP006003_28

>merge|NZ_CP006003|28|9683342-9683474|CRISPRCasFinder
GTCGACGCGGAGATGCGGGAGGCGGACCCCGTCGCGCCTCGGAAGGCCTGGGACGTGGGCGAGCGCACCAGCGCGGACAGCGGGACCCTCATCCCTGTCGACGCGGAGATGCGGGAGGCGGACCCCGTCGCGC

>NZ_CP006003|28|26|9683342-9683474|CRISPRCasFinder
GTCGACGCGGAGATGCGGGAGGCGGACCCCGTCGCGC	CTCGGAAGGCCTGGGACGTGGGCGAGCGCACCAGCGCGGACAGCGGGACCCTCATCCCT
GTCGACGCGGAGATGCGGGAGGCGGACCCCGTCGCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP006003.1\|WP_046716348.1\|9691248_9693393_+\|gliding-motility-protein	unknown	unknown	gnl\|CDD\|378408
NZ_CP006003.1\|WP_046716340.1\|9679218_9680637_+\|MBOAT-family-protein	unknown	unknown	gnl\|CDD\|224610
NZ_CP006003.1\|WP_046716337.1\|9670751_9672122_-\|phosphomannomutase/phosphoglucomutase	unknown	unknown	gnl\|CDD\|100091
NZ_CP006003.1\|WP_046716334.1\|9668719_9669238_-\|thiol-peroxidase	unknown	unknown	gnl\|CDD\|179055
NZ_CP006003.1\|WP_046716338.1\|9672442_9674386_-\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP006003.1\|WP_046718542.1\|9697400_9697718_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046716339.1\|9674587_9675652_-\|mannose-1-phosphate-guanylyltransferase	unknown	unknown	gnl\|CDD\|223906
NZ_CP006003.1\|WP_082165458.1\|9680633_9681245_-\|CoA-pyrophosphatase	unknown	unknown	gnl\|CDD\|239518
NZ_CP006003.1\|WP_046716343.1\|9682284_9682755_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|380015
NZ_CP006003.1\|WP_046716346.1\|9689152_9690334_-\|methionine-adenosyltransferase	unknown	unknown	gnl\|CDD\|235374
NZ_CP006003.1\|WP_082165460.1\|9687917_9689060_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225322
NZ_CP006003.1\|WP_046716336.1\|9670203_9670755_-\|NADPH-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|377026
NZ_CP006003.1\|WP_046716349.1\|9693505_9696184_+\|export-protein	unknown	unknown	gnl\|CDD\|223964
NZ_CP006003.1\|WP_046716347.1\|9690564_9691140_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377516
NZ_CP006003.1\|WP_082165459.1\|9685258_9687940_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378942
NZ_CP006003.1\|WP_046716351.1\|9696881_9697388_+\|methyltransferase	unknown	unknown	gnl\|CDD\|224204
NZ_CP006003.1\|WP_046716335.1\|9669256_9670189_-\|glucokinase	unknown	unknown	gnl\|CDD\|366120
NZ_CP006003.1\|WP_046716350.1\|9696269_9696869_+\|lipoprotein	unknown	unknown	gnl\|CDD\|275248
NZ_CP006003.1\|WP_046716342.1\|9681264_9682158_-\|undecaprenyl-diphosphate-phosphatase	unknown	unknown	gnl\|CDD\|237134
NZ_CP006003.1\|WP_046716345.1\|9684556_9685213_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP006003.1\|WP_046716348.1\|9691248_9693393_+\|gliding-motility-protein	gnl\|CDD\|378408	pfam10136, SpecificRecomb, Site-specific recombinase. Members of this family of bacterial proteins are found in various putative site-specific recombinase transmembrane proteins.	0
NZ_CP006003.1\|WP_046716340.1\|9679218_9680637_+\|MBOAT-family-protein	gnl\|CDD\|224610	COG1696, DltB, Predicted membrane protein involved in D-alanine export [Cell envelope biogenesis, outer membrane].	2.26922e-83
NZ_CP006003.1\|WP_046716337.1\|9670751_9672122_-\|phosphomannomutase/phosphoglucomutase	gnl\|CDD\|100091	cd03089, PMM_PGM, The phosphomannomutase/phosphoglucomutase (PMM/PGM) bifunctional enzyme catalyzes the reversible conversion of 1-phospho to 6-phospho-sugars (e.g. between mannose-1-phosphate and mannose-6-phosphate or glucose-1-phosphate and glucose-6-phosphate) via a bisphosphorylated sugar intermediate. The reaction involves two phosphoryl transfers, with an intervening 180 degree reorientation of the reaction intermediate during catalysis. Reorientation of the intermediate occurs without dissociation from the active site of the enzyme and is thus, a simple example of processivity, as defined by multiple rounds of catalysis without release of substrate. Glucose-6-phosphate and glucose-1-phosphate are known to be utilized for energy metabolism and cell surface construction, respectively. PMM/PGM belongs to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the phosphoglucomutases (PGM1 and PGM2). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.	0
NZ_CP006003.1\|WP_046716334.1\|9668719_9669238_-\|thiol-peroxidase	gnl\|CDD\|179055	PRK00522, tpx, thiol peroxidase.	1.79766e-64
NZ_CP006003.1\|WP_046716338.1\|9672442_9674386_-\|serine/threonine-protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	3.26384e-57
NZ_CP006003.1\|WP_046716339.1\|9674587_9675652_-\|mannose-1-phosphate-guanylyltransferase	gnl\|CDD\|223906	COG0836, {ManC}, Mannose-1-phosphate guanylyltransferase [Cell envelope biogenesis, outer membrane].	8.83974e-151
NZ_CP006003.1\|WP_082165458.1\|9680633_9681245_-\|CoA-pyrophosphatase	gnl\|CDD\|239518	cd03426, CoAse, Coenzyme A pyrophosphatase (CoAse), a member of the Nudix hydrolase superfamily, functions to catalyze the elimination of oxidized inactive CoA, which can inhibit CoA-utilizing enzymes. The need of CoAses mainly arises under conditions of oxidative stress. CoAse has a conserved Nudix fold and requires a single divalent cation for catalysis. In addition to a signature Nudix motif G[X5]E[X7]REUXEEXGU, where U is Ile, Leu, or Val, CoAse contains an additional motif upstream called the NuCoA motif (LLTXT(SA)X3RX3GX3FPGG) which is postulated to be involved in CoA recognition. CoA plays a central role in lipid metabolism. It is involved in the initial steps of fatty acid sythesis in the cytosol, in the oxidation of fatty acids and the citric acid cycle in the mitochondria, and in the oxidation of long-chain fatty acids in peroxisomes. CoA has the important role of activating fatty acids for further modification into key biological signalling molecules.	5.03418e-59
NZ_CP006003.1\|WP_046716343.1\|9682284_9682755_+\|hypothetical-protein	gnl\|CDD\|380015	pfam17775, UPF0225, UPF0225 domain. This entry represents an NTF2-like domain found in bacterial proteins.	1.80948e-31
NZ_CP006003.1\|WP_046716346.1\|9689152_9690334_-\|methionine-adenosyltransferase	gnl\|CDD\|235374	PRK05250, PRK05250, S-adenosylmethionine synthetase; Validated.	0
NZ_CP006003.1\|WP_082165460.1\|9687917_9689060_+\|hypothetical-protein	gnl\|CDD\|225322	COG2602, COG2602, Beta-lactamase class D [Defense mechanisms].	5.19652e-46
NZ_CP006003.1\|WP_046716336.1\|9670203_9670755_-\|NADPH-dependent-oxidoreductase	gnl\|CDD\|377026	pfam03358, FMN_red, NADPH-dependent FMN reductase.	1.6525e-50
NZ_CP006003.1\|WP_046716349.1\|9693505_9696184_+\|export-protein	gnl\|CDD\|223964	COG1033, COG1033, Predicted exporters of the RND superfamily [General function prediction only].	1.78084e-44
NZ_CP006003.1\|WP_046716347.1\|9690564_9691140_+\|hypothetical-protein	gnl\|CDD\|377516	pfam05494, MlaC, MlaC protein. MlaC is a component of the Mla pathway, an ABC transport system that functions to maintain the asymmetry of the outer membrane. This family of proteins is involved in toluene tolerance, which is mediated by increased cell membrane rigidity resulting from changes in fatty acid and phospholipid compositions, exclusion of toluene from the cell membrane, and removal of intracellular toluene by degradation. Many proteins are involved in these processes.	2.82094e-13
NZ_CP006003.1\|WP_082165459.1\|9685258_9687940_-\|hypothetical-protein	gnl\|CDD\|378942	pfam12770, CHAT, CHAT domain. These proteins appear to be related to peptidases in peptidase clan CD that includes the caspases. This domain has been termed the CHAT domain for Caspase HetF Associated with Tprs. This family has been identified as a sister group to the separins.	2.95084e-10
NZ_CP006003.1\|WP_046716351.1\|9696881_9697388_+\|methyltransferase	gnl\|CDD\|224204	COG1285, SapB, Uncharacterized membrane protein [Function unknown].	6.06797e-47
NZ_CP006003.1\|WP_046716350.1\|9696269_9696869_+\|lipoprotein	gnl\|CDD\|275248	TIGR04455, hypothetical_protein_LEP1GSC192_0546, probable lipoprotein, LA_1396/MXAN_6521 family. Members of this family are predicted lipoproteins, near 200 residues in length, found in multiple species of Leptospira (a spirochete) but also in the Myxococcales branch of the Deltaproteobacteria (Myxococcus xanthus, Chondromyces apiculatus, Cystobacter fuscus, Corallococcus coralloides), an uncommon mix of species. In both lineages, the N-terminal region appears to be a lipoprotein signal peptide.	5.46111e-99
NZ_CP006003.1\|WP_046716342.1\|9681264_9682158_-\|undecaprenyl-diphosphate-phosphatase	gnl\|CDD\|237134	PRK12554, PRK12554, undecaprenyl pyrophosphate phosphatase; Reviewed.	3.3379e-119
NZ_CP006003.1\|WP_046716335.1\|9669256_9670189_-\|glucokinase	gnl\|CDD\|366120	pfam00480, ROK, ROK family.	1.85198e-57

>NZ_CP006003.1|WP_046716343.1|9682284_9682755_+|hypothetical-protein
MPPAPPCPCSSGLRYRECCAPFHKGEAEAPDAERLMRSRYSAFAQREASYLWKTLHPQHPDRARPEADVVRELRAFAQGHQFPKLVVMDRQAPDAQGNAQVLFFAKVFEKGKERSFVERSDFRHDGVGWRYLSGHTLMLRELTVPPESLTLATFPR
>NZ_CP006003.1|WP_046716342.1|9681264_9682158_-|undecaprenyl-diphosphate-phosphatase
MSLIEAIVLGLVQGLTEFLPISSTAHLRIAPELFGWKDPGAAYSAVIQLGTVAAVLIYFRKDIVSLVTAFFKGLAKREPFGTVESRLAWFVLVGTLPIGLCGLAFKKAIETQFRSLYVISGSLIILAIILFVVEKRASHKRTLADMTWKDGILIGLWQALALIPGSSRSGTTLTGGLSLGLKREDAARYSFLLSIPATTLAGIFELKHLLEATERPSAVSLWVGTLVAFASGMAAIAWLLNYLRSRTTLVFVVYRVALGVLLLVLLQMNVLKPLSGVENVDVPPEPGKQQLEKQITD
>NZ_CP006003.1|WP_082165458.1|9680633_9681245_-|CoA-pyrophosphatase
MSVESLFQAVEARLSTRPARSVDLPGLVLREASVLVPLFERDGVPHMVFTRRPATLRTHANQYSYPGGGRDAEDLTPLHTALRETEEELGIDRRGVRVLGMLDEVPTISQYRVRPFVGVIPGDGRYTPSPEEVAFILEVPLARLLDPAILRVERKEVFGAERDLYFYTYESHVIWGATARILRDFLTQLSQVPDFESFLGARG
>NZ_CP006003.1|WP_046716340.1|9679218_9680637_+|MBOAT-family-protein
MLSHSLQYLVFVIAVFALYWAVHRHYWPRMLVLLGASVFFYTAFTPFPLLIFLAGVTVDHVLVKGMGRSQSPGVRKLLVTLSVVSNLGLLAGFKYLELLRQTALSLIPASWGLHVRETPFDLILPLGLSFYVFQAISYTVDVYRGKASSEHSFIEHLLYMLFFPRVVSGPIIRASELLERFRDVPTLTPEDGGRAMFRIAVGLVKKLVIADVLGSGIVDPVFAAPDKYASAECIVAAVAYTFELYYDFSGYSDIALGVAALFGFKFPENFNRPYLAKNVGEFWNRWHMSLSTWLRDYLYRPLGGNRVSKPRVLFNLMTVMVLGGLWHGADWRFAVWGAVHGVALGLTRCWEWSVGKPENPGVPRVAAGMLATFTLVVLTRVVFRAHSMTDAGEFYARMMAGVPGIANVSPLVWGMLAAAVFFHAVPMKLYTVTSEAFVRMPVPVRAMALVVLGLGIRHLASVEARPYVYLQF
>NZ_CP006003.1|WP_046716339.1|9674587_9675652_-|mannose-1-phosphate-guanylyltransferase
MALYPVIMAGGSGTRFWPLSRQARPKQFLPLASKLPLITDTAQRLKGLATVKNTFIVCGPLHAKAALKLVKGLPRPNLLVEPVARNTAPAIALAAVQVAARDPKGVMVVLPSDHHVADVPGFKRVLEQAARIAEGGHIVTLGIQPNRPETGYGYIQVGDTLEGGGRSVKAFKEKPDTETAKAYVSSGEYLWNGGIFVFRADVILAAFAQHMPEMKKGLKALSDAAGKRTFGAVLKKVFPKLPSISIDYGVMEKASNIAVLPGDFGWSDVGSFAAIPEVRPADEHGNVISGDLAVVVDCKGCIVLADKRPLSVVGLSDVVVVDSGDAVLVVPREKSQDVRKVVEALKARKLQKYL
>NZ_CP006003.1|WP_046716338.1|9672442_9674386_-|serine/threonine-protein-kinase
MACNHCAVEHPVGSVCPRAPSLEGQRHGPLVLGAALGSGALGTVYLAEHTPTGHRFAVKVLHPHLAAQPVVRSRFLMEGRALRSLKHRHVARVLDARMGPAGLPCLLMEHAEGEPFSKLPMPLAPAEVVLVLAQALCALEVAHAQGRVHGGISADSLVLTWDSRGERRVKVLGFGSREVLTASLSREERACGMVVGSPAFLAPEQWAQDSVDGRTDIYALGVVGYLLATGRLPFGFGRVGALSPAAPHELNPRVPRALSDVLLRALSQSPGERFPDAVSFREALLDSQGIGRVRPAPPPRTRTSRGSISIFGHILPEDDATPLHRALREVAYEQVPTAELTPPKMESPRGLLVRLGLATDAELVPVRLGDVTVDGFFATWAGVLPPLASQLPVELTFKGRKVACDCDVVRHVTREEARAWNGESGLHVQFAGEAARELLAHALGLGAGPRVLEAEPVPDAELARVLSRAAVVEKDPYALLGALPHEDFEAVRRRATSALRRLNLFRQRTLPLGQRQALEALLRRVEAAGRMLGDAVSRAGYDATRGNLAGVARCLDAGLADEQAEVMRGAFLAARPLAESRARALFTQGHSLEVRGQQDAALERYAEALALDPLNASWLRHYQALRGQARHEVPLSVESAAVEVTAH
>NZ_CP006003.1|WP_046716337.1|9670751_9672122_-|phosphomannomutase/phosphoglucomutase
MNAHIFREYDIRGLVDKDLTAEVVELLGKGLGTIIRRNGGRFIAVGRDCRESSTRFRDSLCAGLTSTGLNVFDVGVVPTPLTYFAANTLPVDGLAMITGSHNPPEYNGFKIGAGKTTFHSHEIQALRRLIEARDFEVSKTPGTVTPYDIITPYNHFVRQTVKVGRKGMKIVIDAGNGTGGAIAVPLFESMGFEVVPLFCEMDATFPNHHPDPTVVENLQDLIAAVKREKAEVGIAYDGDSDRIGVIDDQGNILWGDQLMVLFSRYVLKDSPGAAIVGEVKCSYTLYDDIAKRGGKPVMWKAGHSLIKAKMKEEHAELAGEMSGHIFFKNRYFGFDDAVYSSARLLEILTHEKQTMSELLADVPKTYASPELRFDTKEEKKFEMVKRATETLRAAGHDIIDVDGVRVTFPDGWGLIRASNTQPILVLRFEANTPERLKEIQALIEGTVAQVQREVGG
>NZ_CP006003.1|WP_046716336.1|9670203_9670755_-|NADPH-dependent-oxidoreductase
MSAPRILAIAGSLRTGGFNQKLLALGVEKARALGADVDVVDLKTLNVPLYDGDVEAQGLPPSVVALRERVAKAQGILISSPEYNSSIPGGLKNAIDWASRAPGRLFQGKWTAIMGASPGNFGTARMQPHLRQVMSSVGALVLPTQVHLARAAEAFTPEGRFKDDARQQEVEALVTELVQRVKG
>NZ_CP006003.1|WP_046716335.1|9669256_9670189_-|glucokinase
MPTLGIDLGGTFARAAVVDEAGRMLASTKVALAERSPSGVVETIAQAASEAVRSAGVPVDGCGVGAAAQIHKDSGVLSVAPNLGWRNVPLGKMLTDRLKQPVKVVNDLSAAAWGELHAGAGRGAQDLLVVFVGSGVGSAIIAGGRLLEGAGGVAAELGHIKVIPDGRRCGCGELGCLEAYTGGHNLIAQSKELLVAGSSPVLAKLVENDASRLTPVSLEEAAEAGDEAAREVYERAARFLALAVANQVTVLNPARLILGGGVLNHCPGMRRRVLDGVRAWASQTSREGLLIADAELGDDSGLIGAALLAA
>NZ_CP006003.1|WP_046716334.1|9668719_9669238_-|thiol-peroxidase
MAEFKDQVTYRGKPVTLEGDGQVQVGDLAPDFTVYKGFYESHRLSELKGQVVVLSVAPSVDTKVCAIQLRMFNQQATKLGPDVKVWYLSLDLPFALNRFTAAEGIQNVAVLSDYKDREFARKYGLYMKELGLLARSTFVVDREGRVVFREVVPEMMHEPDYDAALEAVRKAL
>NZ_CP006003.1|WP_046716345.1|9684556_9685213_-|hypothetical-protein
MKTSKKLMMCVLFVGALSGCRTLGSRPTPSPSCPEVAPLPKVPTIQALPPNAELPEGATQVVVGLCRRTGQYLALGVAPEQGRFAYAVAGSRGTSDAFFARVQRLGLPMTVFSAPVKLRKGGSVGSSAVDTGSSPQQGNPQEDKDPTEGPTYDPCINQQDEIGDKPPPDPTDEGGAAPTVPSSFASLAWQTANAIDAASDPAPEKPDTTPPTGSTVPR
>NZ_CP006003.1|WP_082165459.1|9685258_9687940_-|hypothetical-protein
MAGGAALMAGLRSRRVAPVSPELFLTSAPVRMLEARVSYPGADVYRPYGPLRSAADAGRAAPAPLSELARLEAAGDMHGLAAAYLVRRNAEMAAPYLAKAGTSPDVASDQAIMALDRGDSASALALLEGVLASRPTHAQALWNRALVLRDLELWALAAQSFDAVAALGESGWAQEATSRAESSRGRLRGTEDWRKTSTWGQSLIVEGALVPDDVLRAQPGIFRMYFYEALRAAPTAERVRALEPMAATLDAHSGGTVLREALQWTLTRDFQLRAPLARRYLELYRTHQVTGGFAAFLEDVRRAGEQDLFLGALVRESKVADHLDEVSRLVAKLQDPWFTLLLEHERALQAISRGELLQAEQLLLSAAARCQQHPLGYRCIPIESDLGDLYRQLHRLAEAQRHLLAARALYRADPRWGEAQLLLQLGQLARYQGDAALARGYLEEALAQRPDDCTIRHFVRANDALALLEAFSVESAQARMREALACKTPLLLSGAKTLADLARLQPDSALDARLVQGMAERRQKGNLTPGESALLTHIEGRYVVERDRPRGEALLRQSISEAAKLPATSVDARKARAYSYTSLLFSSAKAGEYEQAWRLFGEEVGGQLPGRCVLAVTTDVERTFVLVRGPEGQLVGHHDASRRAPLHDELQGLIPDALTDLLRACPAVEVVARPPLHGRAGLLPEDLAWAYHSVRASPVASGARAPRRLVVADVQAPEALGLPMLGGWAGLPGDEATMLLGRQATPSRVLEAMTDATQIEVHAHGLMNPDVSEASLLVLSPEPSGRYALTAGEVRGAKLRGQPLVILGACRAAHGAAWTYERFSLPVAFLDAGASTVLAATVDVPDAEAGPFFNAVRERIEHGERAANALRDVRMAWMKRDPRSWVRSVLVFD
>NZ_CP006003.1|WP_082165460.1|9687917_9689060_+|hypothetical-protein
MSAAPPATTTNATRTADFGLGIQDPDPASTGELPAYVPWQPMPAQRRVARIFPSHATPLRTTAVRTNHRTRVVLRPRARLRPRESSWPTPCSERTPDTAGPPSPRSPMSRLPLRAVLLTLLVTTSALAAPPKTPKHPGCFLVMDLDSGEVTRNGAKLCATPLVPASTFKVPHALIALETGVVSSVDEVRKWDGTQHAIAMWNQDQTLDTAMRRSALWFFQGTAKQIGRERMEQWLMRLDYGNRKASGDITRFWLGGPLRITPDAQLDFLARMYRGQLLVSPRVLEAVQGTLVHGPDTVASVRDGLNLGGPWKDNAVLSAKTGWHLDAKDGDVMWLVGHVCSPKGRHVFVSAVKQPPGSKSPSRNLALPAAIEALQARGLL
>NZ_CP006003.1|WP_046716346.1|9689152_9690334_-|methionine-adenosyltransferase
MPTDFLFTSESVTEGHPDKIADQISDGVLDAIIAKDPQARVAVETLVKTGLAIVAGEVTTNTYVDIPRIVRSTICKIGYTDSSMGYDGNTCGVMVAIEGQSQDIARGVDNKKDQGAGDQGMMFGFACDETPELMPAPLHYAHALTRKLADVRRKQHDWLRPDGKSQVTVEYREGRPVRIDAVVVSTQHAEDISNKRIQEAIREDVIAKALPKKLIDNKTKFFINPTGRFVVGGPMGDSGLTGRKIIVDTYGGMGRHGGGAFSGKDPSKVDRSAAYMGRYIAKNVVAAGLARRCEVQVSYAIGVAEPVSVMVETFGTATVPEERIAKAIRQTFGLRPREITEGLDLLRPIYQKTAAYGHFGRSEKEFTWERTDRKDALRDAANSTSSSRRLKAV
>NZ_CP006003.1|WP_046716347.1|9690564_9691140_+|hypothetical-protein
MNTRFRTLSLLVAFAFALPAAAAAPKKDDPVVKPVKTVVSSVRYERDAAALKLFGGEEQGKYLLGDEWAKGTDEQRKEFVSLFHGLFAKIAFPRVRENFKSLEDIVYSPAEVNGGEATVDSVVFIKHPLKTQEMKLKYRLVKDAAAWKVVDVTVLGSSMLQDIRDTQVQPLLKQGGWDLLLGRMRQELAKK
>NZ_CP006003.1|WP_046716348.1|9691248_9693393_+|gliding-motility-protein
MTASLSVPPPSRSPHGPSEREVDAFCMQYAPRAPGHPAVRDLYRLLRDVPEDGLEARLAWVERWMAWLRERLPAHALVDEAEPEQPPADARLALMVRVLEGESAMRASLTALVSGVCDGSRGLKLFAQVGLPAGQGFFAEASDRLARAVLPAPPEPGKLSELLLRLFPVPEDARWLLHLSPALLAKLSSLVGEPRPPMPQPGARVRADLMDALLLLALQTAALGTTEDVRDRAPETSLRASPFLRLRLVCDAVLARDAAQDTLRDLSTCVDDCRKVVGSVSRHLEEAGVSVDLVYRLERIRRSLERMEAIARVLGAPRGEPRWREALGLLSDLLRRAHADRSVVELARRNVRMLARKIIERAGHSGEHYITTTRPEFHAMVHSAAGGGVVTALAVAGKFLITAVPLAPLFALLGVGLNYAVAFMLIQALGFTLATKQPSVTAATLAGAIGEGARGDRLSSLVDIIPRITRSQLAAFAGNLGCVLPAAVVLALLWQVATGHPFLSPAKAQATVASMHPWKSGALLYAALTGVLLWLSSVAGGWLENFVVYRRLPEALAHHRVARRLFGDKGARRLAEGLAHTASGIGTNVTLGFLLALMTILGRFVGLPLDIRHVTFALGGLAMAGAALGPHGVLQPDFLWALVGVGLIGVMNFTVSFSLALGVAVRARDVPTAEALPFLRAVVARFLSAPRSFFLPPGEPPALPAAPALEHGRP
>NZ_CP006003.1|WP_046716349.1|9693505_9696184_+|export-protein
MSGAPRNPNSHSRFAYSFARLLVRRPGTVLAVLLTLLAVSTWATLQLRINSNQLDLISQDLQEVKDVKQVIDMVGGSGFLMLALRSTDEAAMKRTADDIAGMLQADKEHVRTVSYKLPVEFIQQNMVLFVKTEDLVEGKRRIMAFLEDKLRRSNPFYIDMGATKPVELNLQDLVDKYSSVGKKSIRDDYNISADKKMVLILIKPMWDTTEIGKTKDYLDKLNKDLAAYSTQDGKPKLVEDYKRMGDANTIAYGYTGSYKTTVDDSFAIEESLEPVTIIALVTIFLITIVFFRKLAPTFIVVSGTVIGTIYTLGFTYATIGELNMITSILGGILMGFGIDYGIHFTFRTRLELGAGKPYDEAIVDAFVNAGRPAAVAAVVTGGSFFVLMVSEFRGFSQFGFLAGCGTLILGLTLFVWSAALLALFGRINPAWPKKLIGEMKPPPAVSSSGQELRIPRPGLVLGVSTALVALICAAAVPWAGTGEPPEGNLSFFERVKHGVGFNYNTRALIPDGMSSVLLQDEINARFNISSDPMAIYTKDLDEAEGIYRELTQNPEKYPSIDQVVSVFTFVPPEATAQANEKVLQEWKQDMANLEARGFSIAALPPEMQENAAFFMKVLDAKPFDVHGVPANYKSQFQNLPSAQPENRGWLTFIYSSVDLFDGQKMMQFADETRAIRATYHPGRFDKDEFDPQGPTAQKEFRAAGATQLYAKLARIVLWDGKVTVVLTALWILAMHFLDFRNAKLALASVIPLGVGVAMMLGIMSLVGLRLNFMNIIILPILLGFGVSHGLYLLHRFLEGTSPLVALRSVGAAVASSTLTAVAGFAALLAAAHNGLRSMGMVACIGLITTLVVSFTVLAAVMQLMHDRRKRESPPGDGTGSASGGEDGSTRAA
>NZ_CP006003.1|WP_046716350.1|9696269_9696869_+|lipoprotein
MKLMRWAPVLGLGLLAGCSAVKSHRVRPDYAQVDRKQTKRLVVVAQPLPDEKPAVGELWSLIARQWVNQNRDFIVKDNVALPGRPTDTTFKELCTEGVEGVLWLDPTIQLKGDGAEAEVKAQLLRCLDGEEVWAAQAAGSWGSRDEDYAARVTKFSQELGEEVAQYVVPTTKLLAATLDTLPNPELTEADKDEKIELGE
>NZ_CP006003.1|WP_046716351.1|9696881_9697388_+|methyltransferase
MEEKLIVMRLGVAALLGAVLGLERELRGQSAGLRTHIIVSLGACLFTLSSVFVEWALAGGAPEGSRADVSRIASQVVVGIGFLGAGAIIRDNGQVKGLTTAANLWLTASVGLAVGMGFHWAAVTTVVIALVALAGLRPLEKAIRKHRARRGLKVEGRVPEHPEDESPE
>NZ_CP006003.1|WP_046718542.1|9697400_9697718_-|hypothetical-protein
MFNPADIQKGMTARDRDGENLGLITAVDAAGFLIEKGSYFPRDYRVSFSDVTDIDRDDVYLREDLASLPGVRPDVLAARGEVARRVPLQHDLTGALGAAPADWDR

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Crispr_ID: NZ_CP006003_29

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP006003_29

9908709-9908783

Orphan

Consensus_repeat	Method
CGTGCCCGAACCACTCGCGCCCGAGCC	CRISPRCasFinder

1 spacers

csa3

The CRISPR arrays of NZ_CP006003_29

>merge|NZ_CP006003|29|9908709-9908783|CRISPRCasFinder
CGTGCCCGAACCACTCGCGCCCGAGCCACCAGCAGGCGAGCCACCGGTCGCGCCCGAGCCACCGCCCGTCGAGCC

>NZ_CP006003|29|27|9908709-9908783|CRISPRCasFinder
CGTGCCCGAACCACTCGCGCCCGAGCC	ACCAGCAGGCGAGCCACCGGT
CGCGCCCGAGCCACCGCCCGTCGAGCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP006003.1\|WP_052771317.1\|9917170_9918700_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046716507.1\|9912421_9913372_-\|thiamine-phosphate-kinase	unknown	unknown	gnl\|CDD\|235583
NZ_CP006003.1\|WP_046716496.1\|9899899_9901468_+\|ATPase	unknown	unknown	gnl\|CDD\|177094
NZ_CP006003.1\|WP_046716508.1\|9913400_9914969_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046716505.1\|9910242_9910965_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377256
NZ_CP006003.1\|WP_046716499.1\|9904033_9905215_-\|TIGR00299-family-protein	unknown	unknown	gnl\|CDD\|376691
NZ_CP006003.1\|WP_046716504.1\|9909804_9910227_-\|chemotaxis-protein-CheW	unknown	unknown	gnl\|CDD\|223905
NZ_CP006003.1\|WP_046716510.1\|9919725_9920067_-\|ArsR-family-transcriptional-regulator	csa3	COG0640_csa3_CAS-I-A	gnl\|CDD\|238042
NZ_CP006003.1\|WP_046716494.1\|9898012_9899008_+\|gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NZ_CP006003.1\|WP_052771316.1\|9915078_9916971_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238035
NZ_CP006003.1\|WP_046716492.1\|9896549_9897047_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046716497.1\|9901464_9902178_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046716501.1\|9905988_9906588_-\|fibril-biogenesis-regulator-DifG	unknown	unknown	gnl\|CDD\|381737
NZ_CP006003.1\|WP_046716500.1\|9905211_9905964_-\|1-(5-phosphoribosyl)-5-amino-4-imidazole--carboxylate-carboxylase	unknown	unknown	gnl\|CDD\|224605
NZ_CP006003.1\|WP_046716503.1\|9909354_9909729_-\|response-regulator	unknown	unknown	gnl\|CDD\|381097
NZ_CP006003.1\|WP_046716493.1\|9897033_9897747_-\|DUF2238-domain-containing-protein	unknown	unknown	gnl\|CDD\|378345
NZ_CP006003.1\|WP_046716509.1\|9919216_9919708_-\|activator-of-HSP90-ATPase	unknown	unknown	gnl\|CDD\|176900
NZ_CP006003.1\|WP_046716506.1\|9910961_9912362_-\|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|223910
NZ_CP006003.1\|WP_046716498.1\|9902223_9903519_-\|SH3-domain-containing-protein	unknown	unknown	gnl\|CDD\|377965
NZ_CP006003.1\|WP_046716495.1\|9899048_9899810_+\|VOC-family-protein	unknown	unknown	gnl\|CDD\|319911

Protein	Function_ID	Function_description	E-value
NZ_CP006003.1\|WP_046716507.1\|9912421_9913372_-\|thiamine-phosphate-kinase	gnl\|CDD\|235583	PRK05731, PRK05731, thiamine monophosphate kinase; Provisional.	8.22077e-117
NZ_CP006003.1\|WP_046716496.1\|9899899_9901468_+\|ATPase	gnl\|CDD\|177094	CHL00195, ycf46, Ycf46; Provisional.	4.73778e-169
NZ_CP006003.1\|WP_046716505.1\|9910242_9910965_-\|hypothetical-protein	gnl\|CDD\|377256	pfam04237, YjbR, YjbR. YjbR has a CyaY-like fold.	2.7399e-17
NZ_CP006003.1\|WP_046716499.1\|9904033_9905215_-\|TIGR00299-family-protein	gnl\|CDD\|376691	pfam01969, DUF111, Protein of unknown function DUF111. This prokaryotic family has no known function.	5.87388e-180
NZ_CP006003.1\|WP_046716510.1\|9919725_9920067_-\|ArsR-family-transcriptional-regulator	gnl\|CDD\|238042	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to dissociate from DNA in the presence of metal ions.	1.68689e-15
NZ_CP006003.1\|WP_046716500.1\|9905211_9905964_-\|1-(5-phosphoribosyl)-5-amino-4-imidazole--carboxylate-carboxylase	gnl\|CDD\|224605	COG1691, COG1691, NCAIR mutase (PurE)-related proteins [General function prediction only].	1.3736e-92
NZ_CP006003.1\|WP_046716494.1\|9898012_9899008_+\|gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	2.624e-37
NZ_CP006003.1\|WP_052771316.1\|9915078_9916971_-\|hypothetical-protein	gnl\|CDD\|238035	cd00081, Hint, Hedgehog/Intein domain, found in Hedgehog proteins as well as proteins which contain inteins and undergo protein splicing (e.g. DnaB, RIR1-2, GyrA and Pol). In protein splicing an intervening polypeptide sequence - the intein - is excised from a protein, and the flanking polypeptide sequences - the exteins - are joined by a peptide bond. In addition to the autocatalytic splicing domain, many inteins contain an inserted endonuclease domain, which plays a role in spreading inteins. Hedgehog proteins are a major class of intercellular signaling molecules, which control inductive interactions during animal development. The mature signaling forms of hedgehog proteins are the N-terminal fragments, which are covalently linked to cholesterol at their C-termini. This modification is the result of an autoprocessing step catalyzed by the C-terminal fragments, which are aligned here.	2.24507e-09
NZ_CP006003.1\|WP_046716501.1\|9905988_9906588_-\|fibril-biogenesis-regulator-DifG	gnl\|CDD\|381737	cd17909, CheC_ClassI, chemotaxis protein CheC, Class I. This subfamily contains Class I CheC proteins with phosphatase activity. The Class I cheC genes are generally found in firmicute and archaeal chemotaxis operons with cheD, usually translationally coupled. Class I CheCs interact with the CheD protein which is responsible for deamidation of certain glutamine residues to glutamates on the chemotaxis receptor proteins. This family contains two active sites with the consensus sequence ([DS]xxxExxNx(22)P), with four conserved residues thought to form the phosphatase active site. The C-terminal helix of CheC acts as a mimic of the natural enzymatic target of CheD, the alpha-helical receptors, and serves as the binding site for CheD. The CheC/CheD heterodimerization increases CheY-P phosphatase activity five-fold. Class I CheCs are involved in adaptation of the chemotaxis system.	1.53455e-44
NZ_CP006003.1\|WP_046716504.1\|9909804_9910227_-\|chemotaxis-protein-CheW	gnl\|CDD\|223905	COG0835, CheW, Chemotaxis signal transduction protein [Cell motility and secretion / Signal transduction mechanisms].	1.79464e-26
NZ_CP006003.1\|WP_046716503.1\|9909354_9909729_-\|response-regulator	gnl\|CDD\|381097	cd17542, REC_CheY, phosphoacceptor receiver (REC) domain of chemotaxis protein CheY. The chemotaxis response regulator CheY contains a stand-alone REC domain. Chemotaxis is a behavior known for motile bacteria that directs their movement in response to chemical gradients. CheY is involved in transmitting sensory signals from chemoreceptors to the flagellar motors. Phosphorylated CheY interacts with the flagella switch components FliM and FliY, which causes counterclockwise rotation of the flagella, resulting in smooth swimming. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	2.11223e-56
NZ_CP006003.1\|WP_046716493.1\|9897033_9897747_-\|DUF2238-domain-containing-protein	gnl\|CDD\|378345	pfam09997, DUF2238, Predicted membrane protein (DUF2238). This domain, found in various hypothetical bacterial proteins, has no known function.	1.77545e-68
NZ_CP006003.1\|WP_046716509.1\|9919216_9919708_-\|activator-of-HSP90-ATPase	gnl\|CDD\|176900	cd08891, SRPBCC_CalC, Ligand-binding SRPBCC domain of Micromonospora echinospora CalC and related proteins. This subfamily includes Micromonospora echinospora CalC (MeCalC) and related proteins. These proteins belong to the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain superfamily of proteins which bind hydrophobic ligands. SRPBCC domains have a deep hydrophobic ligand-binding pocket. MeCalC confers resistance to the enediyne, calicheamicin gamma 1 (CLM). Enediyne antibiotics are antitumor agents. Enediynes have an in vitro and in vivo role as DNA damaging agents; they consist of a DNA recognition unit (e.g., aryltetrasaccharide of CLM), an activating component (e.g., methyl trisulfide of CLM), which promotes cycloaromatization, and the enediyne warhead which cycloaromatizes to a reactive diradical species, resulting in oxidative strand cleavage of the targeted DNA sequence. MeCalC confers resistance to CLM by a self sacrificing mechanism: the transient enediyne diradical species abstracts a CalC Gly Calpha-hydrogen, thereby quenching the reactive enediyne moiety, and generating a CalC Gly Calpha radical. This radical then reacts with oxygen, leading to oxidative site-specific proteolysis of CalC. This antibiotic-induced proteolysis of CalC results in inactivation of both CalC and the highly reactive diradical species. CalC has also been shown to inactivate two other enediynes, shishijimicin and namenamicin. The crucial Gly of the MeCalC CLM resistance mechanism is contained in a loop (L1) which is displaced when CLM is bound, this Gly is not conserved in this subgroup.	5.58774e-28
NZ_CP006003.1\|WP_046716506.1\|9910961_9912362_-\|methyl-accepting-chemotaxis-protein	gnl\|CDD\|223910	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms].	4.96121e-49
NZ_CP006003.1\|WP_046716498.1\|9902223_9903519_-\|SH3-domain-containing-protein	gnl\|CDD\|377965	pfam08239, SH3_3, Bacterial SH3 domain.	0.000164426
NZ_CP006003.1\|WP_046716495.1\|9899048_9899810_+\|VOC-family-protein	gnl\|CDD\|319911	cd07247, SgaA_N_like, N-terminal domain of Streptomyces griseus SgaA and similar domains. SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a streptomycin resistance protein.	3.21206e-32

>NZ_CP006003.1|WP_046716501.1|9905988_9906588_-|fibril-biogenesis-regulator-DifG
MSLPLPSDAQLDALREVANIGCGHAANALSRLMGGRQVDLSVPRVVLTGPEDAAGLLGGDASAVAAWLAITGALRGVLMLALPASDAQALETLLLGAQESGQAERDSAVSEAANIVASACLSAIGKLTSWRLMPSVPTLRRASARELVGAAVGQVEGDPGRVVVLEARFMAAATPPVSGQLLLVLERDSSRALLARLGV
>NZ_CP006003.1|WP_046716500.1|9905211_9905964_-|1-(5-phosphoribosyl)-5-amino-4-imidazole--carboxylate-carboxylase
MDEKALKQLLGSVKSGRVSVDDAVGKLKDLPFAELGYATLDTHRNLRFGFPEVVLGEPKTVEQLLGIVGALVERKQTVLVTRLQPDKAEALVARFPKGLYHPVARIFHLKQGKVRAGRVAIVTAGTSDIPVAEEAAVTAEAMGAEVRRVYDVGVAGIHRLLRRREEIQECHAAVVVAGMEGALASALGGLVGIPIVAVPTSVGYGANFKGVSALLAMVNSCASNVATVNIDNGFGGGFYAALVSRTKGRR
>NZ_CP006003.1|WP_046716499.1|9904033_9905215_-|TIGR00299-family-protein
MSGMRRILYLEPVGGIAGDMFLAAGIDLGLEPAAIEAALRGLSVPGWKLAVSRAVRHAISGTHLDVVLDAREAHPHRAYADIRRLIESASTLPPRAKERALAVFRAIGEAEAKVHGVSIDDIHFHEVGAVDSIVDICGAAVVLELLGDPEVHAAPPPLGSGSIRVAHGMMPIPVPATLELLRDVPVRFEGVGELTTPTGAALLKVLAKIGHPPDFIVEKVGYGVGTKDFRDRPNVLRASLGRLEDSRTEGLWVVEANLDDATPQLVGHLVERLLAVGALDSWVAPVVMKKSRPGHLLSALVEGGLRDTTVDLLLRESTSLGVRYHRVERQALARDWVEVETPWGPVRVKRGLRDGAVLNAHPEFEDCRRVAEAAGVPVKQVVAAALVALGLPS
>NZ_CP006003.1|WP_046716498.1|9902223_9903519_-|SH3-domain-containing-protein
MANATVQQAVPPALQPAAKAAVNFAVSSFEQGKPARAPVALNVMPPPTVIITSPTVIPPASTPVTAAPVSANQGDGVVQPGDKRTVTTGDDTLNLRPDAGTSQKPTGSFPSGARLEVATPPDGGSSEKNGFIYVRGPGGETGWVSAEFTRELTAEEAAQRGPTGGITTPAAAAYQSVFVNQFAAEKDVGGDASNANCGPSSTLTALLNEGLEIPDIPGIEHNGTTGADVQAVRYWGNQADDTGSDGVFTKEDGTLAYSLDGSGNENSTFTGFKDVANAVAAAGGTTSSVAANSTDIMTAIDNGSTVVISGTFVETKPAPEGTPEALVNPENGNLYVDSDGDGAPDLKNGVPNEWHQKADTWKGQHGSTMHLVAVVGRTPEGNFIVCDPAHTEPTAAPIELSPGELDAFMRGNPGAIAVNGAATPETETPSA
>NZ_CP006003.1|WP_046716497.1|9901464_9902178_+|hypothetical-protein
MSPKLSRFLHLEKDRSERTKREQPSQLQNGGRRFEDIAERGALPQGDVPEAHLERFKAEAPVVLEPRAASLEEAWDFPRCAVCDSDNGRFAKLCQQCGADLGTPQQLEHRARLAVERREARAREQGEERQGALERLEQERRADSERYAYLLEKLRAEEQSYRGWRIFARHSTVGTGLLALLPNTLTRCLTVAGYVGVCAGLMRLGTGNTRGVGAWLLIVFVLLFVPRSALRHRWRLR
>NZ_CP006003.1|WP_046716496.1|9899899_9901468_+|ATPase
MSSPAPGSANAHRPAEPWLEELDILVRARYPLLYLVSWEEHRVDAILAELARAHGKALFQWSITKGLRASGTTRSAPLPDDTRNPIDAMAAIEKLGEPALVVLKDFHPYLEEKSVVRALRELAHFLKSTFTTVILLSPTLLIPVELEKEVSVIDVPMPGYNDLLQLLREIVAVVRRTNKATIELSREHADQLIKAALGLTMSEAENAFAKAIAHDGKLGPEDIKRIQDEKRQVIRKSGLLEYYPPEESLGNVGGLEYLKAWLSQRTAAFGERARQFGLPEPRGLLLLGVQGCGKSLTAKAISAHWNLPLLRLDMGRIFSGLIGSSEENLRKAIRVAEGVAPVVLWVDEIEKGLSGVASSSTADSGVSARVFGTLLTWLQEKTAPVFVVATANRIEGLPPEVLRKGRFDEIFFIDLPEQAEREDIFRIHLRRRKREPSSFDVVELATLTQGFSGAEIEQVVVAGLYEAFAENSELAQQHLVRTLRDTFPLSVTMRDEIRRLRDWAKGRTRPASSSGALVERAP
>NZ_CP006003.1|WP_046716495.1|9899048_9899810_+|VOC-family-protein
MPSIDHHAPGTPNWVDLNTPDLEGARRFYGELFGWEFLVGPKEDAHYTMCLLGGRKVAGMSLKDPASPGRPYWALSFEAADTKALAARVVELGGKLVVPPTDASGLGTFASCVDPTGAGFNLWQSGKHQGAQVVREPGSMTWHEVNTRDGVRAKDFYADLFGLEPRKRDDMSYWAFHLGDTPVAGVLQMGPMWPKDLPPHWMNSFAIADVDGAAEQVKRLGGHVHVPPTDSPFGRFCIVTDPAGAGFTLIHPT
>NZ_CP006003.1|WP_046716494.1|9898012_9899008_+|gfo/Idh/MocA-family-oxidoreductase
MTTRIGIIGTRWGLMHVGAFRAAGAQVVALCGRSPESTHAVAQREGIPFATTEVDELCAAVDAVVVASPDALHAPHLLTALEAGRAVLCEKPLTRTVEDARRVVLRARELSSPSAVNFPYRMLPPLRALKSWLSGRKVQHLVVTLRTGFVTRHPSDLEDASGDWGGLSHVLDAALWLTDATPLWVQATLSGRPVHTAALHVGLSSGAVLVLTHAACAEPGIHGGWSLLGQDWEVGFSAGYVPAREGWCISSIRGFEHGGWSDIAPGAEPHPGQLEPWAQAHVETARRFLGLRRHAPRDGLATVEDGALVQEVLAAALRSDAEGRRFPVPHE
>NZ_CP006003.1|WP_046716493.1|9897033_9897747_-|DUF2238-domain-containing-protein
MQPAVPLDAPAVDSVAPFYPPVRGTREEARTPLLLAAVLAPILVATFFLSPAGKLNWLLEVGPGLAGMMALASTFRRFPMSRWVYVCVFLHILVLTYGGYYTYALTPLGNWVRDALELSRNPYDRLGHFVQGFFPAFIIREVLLRSTPLRRGGWLNFLTGSVALAISAFYELLEWWAALALDPAGGDAFLGTQGDIWDAQWDMFLALCGAVLAMLLFGRAHLKSVERLVTRARITST
>NZ_CP006003.1|WP_046716492.1|9896549_9897047_+|hypothetical-protein
MSGEIQGAWFKAILGSMTAAASRFPTHQRTINGMRDDTWYAWEDYVHIMRELHKSLGDRAVEAIAQRSGMRTLPLARAKGFDSVEKVFGDFDSVLRSLVKGLPSTDSARTVAFMPLAAELESGSRLPAPLLLGTFRGFLMGFGKIVTEAKTTPRMGMQRYSLKWM
>NZ_CP006003.1|WP_046716503.1|9909354_9909729_-|response-regulator
MAKRVLVVDDAIFMRNMIKDIFASGGFEVVGEAANGLEAVEKYKELKPDLTTMDIVMPFKSGIEATREIIKHDSSAVVIMCSALGQESLVMEAIEAGASDFIVKPFRAEDVLGVVKKVLGVGGA
>NZ_CP006003.1|WP_046716504.1|9909804_9910227_-|chemotaxis-protein-CheW
MRHVIFRVEKERYGLPLSAVREVVVPPERFTRVPRAPAAITGVMNLRGRVVTVVELRQLLGLPDGASPPSRVVLLDRGRRDLGLLVTDVDGIEAVERVSTAPGKSTPAIRGVARLGGLGVTVLDPEGLDAAVVALFTHSK
>NZ_CP006003.1|WP_046716505.1|9910242_9910965_-|hypothetical-protein
MSQGATVVLGAAEARLREVMLALPDVTEEFPWGHRTAKVRGKMFAILVLDEEGLRITTKLPTSHEAALMLPFAEPTGYGLGKSGWVTARFTPGQEVPVELMALWIQESFRAVAPKSLGDGASVVKKSAASKTKAVGAESTVSGAKAKASGAKVKPAAAKQKTASVKVKPAATKAKTAGVKVKAVGAKATPAGTKTPGAKVKRPGKKTAAAAGKPSARKVAPGVKRPRTARRATASRSMQS
>NZ_CP006003.1|WP_046716506.1|9910961_9912362_-|methyl-accepting-chemotaxis-protein
MRRPLRDDTAPGLTPRREPLQRLVRAAVDGRRTTKVVSLQSSITKGYVVLGLALTIWMVVSEPLAQGLVEMLGLDQVAEWKVAIRMLGAIGITGLAAFALPSLLARVTRVKVLSNSAYEISQGDLSKPVAAEGGSTRDEIDELTGAIIRMQENLRELVGKIQETAKSVADTAIDLQRSAENVNGSTEEVGSSMNIIAGGAETQSQLVSKASKVITEMASSIQRTTGSAEDAARTTAETSSAAEDGSKAARLAGDKVKKVFNRIESASQQVFAFGEKTQEISKIVDAITQVAQQTNLLALNATIEAARAGEYGRGFAVVADEVRKLAESAGRSAEQISKLARDISGQSTSVVSAMKEGIAELAEGREDLTNIVRSMGAITDTIRKGSEKVHLISESTREQHKGSEEMVKAIEEIKLVARNNAASTEAIQSVIQEQTAAVSRMTSLASELTNLSVELQSVVRSFRLGS
>NZ_CP006003.1|WP_046716507.1|9912421_9913372_-|thiamine-phosphate-kinase
MPGEFDFIRRFLGHFPKAQVPVGPGDDCAVLAPSRGALCVTTDAVVEDVHFTRASFSPADIGHKALAVNLSDVASMGATPRWFVCALALPRDFPPAHLSGLARGMAALAREHRVALVGGNFTSARELSITITATGELSRPPLTRAGARPGDWLYVSGTLGDARLGLAHLRAGVKRGASVQRQRRPQPRVALGQLAARFASAALDVSDGLAQDLGHLCTASGVRAVVELSKLPMSAAVRRELGPEGALAGGEDYELLMAVPSARGRAFERACARGGHPVTRVGTLLEGAGWVIHDESGRDVRRPGGFDHFRQASRVD
>NZ_CP006003.1|WP_046716508.1|9913400_9914969_-|hypothetical-protein
MRNTVVMSVLVMGLLACADAPPRPPPPGFCPERPAAEVPGRPGQVPLRVRSPERFDAWRARVGLARTSSSEVPERLEAWRAQTGLSSVAPSAQAGVDLAGRSWWATPCLVGTPGLEVATPRVAVTESGRAMAVWTENDGLNEALWASEYTPTTGWSPARKVDLFRELPDDELRVRQPQVVADGEGRVLLMWLQSEGSTATQLWSTRHVPGEGWSKADRVLAHPLGDATHLELARDAAGGFTVIWTQFDGDTFSENVWTTRGSPSTGWESARRIDTPAPGFSLEPRVSVSSDGHVVVGWDRFDEFEGIPVVWFSRWTPSGGWSAAERMSPPGMDGFYAEPVAGPGGTALALWSGLGAVEVELWARRFVPGSGWSTPERLEEVLGSSGAAQATPERDGRTLVVWPRARDGVTRLSSRPFDFTRGFRPREDVAQPPKGLIAMDPRVVTVSPWESLAVWTQEVEGGRRIAASRYVLGRGWGPATWLDTEPSARTGSARVAVGAQGGAVATWLHGGEVPGVGLSVFQ
>NZ_CP006003.1|WP_052771316.1|9915078_9916971_-|hypothetical-protein
MKPCSRFSVPVTAALPLVALATSAWAGPLRSPDRGLDGATLVEDSQYMRRVFEEKSRGAGGESIAIDLADPAQYRFVMNRLRGSGKTVANAPRLFERLALAQRRALAHKAAGTQAAPLANNWGCDHFLNLTRGVTSGMVRVYESNPWAACLNGASYVYTDIVAFNANNAETQTTVVDSASGEEYAAGQSFDDVIVRPAIPVNQDRQVILDSMMIAMNENTGEEVVTFVRGQSSTTTGGADLALEHPRLSVPGSGKLNTELCQMRGGIDCDYAAVGATLAPSGGNTPTSIALRNPAVTASWVGDAANNFPLTRAWDWSHVYVPTKFTFNAGTKNGIACVIKEILPGSKVRLVKPITGGTCMSQADLTPFLAGSINSQTANVTLLADLTRETSIAGTGVENCAMQTIINQPVEYVITVSTKVNCGTTANTPASVTVRMLSDSRYRYGVQVWNSCMAEGTQVVLADGSVVPVESVKRGQRIVTNAKGDTLTVRDVQVGGERDAMVNLRDDKGHAVSLTDKHPVIMADGKPLAAGKLKVADKVSTREGVATLTSVTREKYAGKVYNFSLGTTEELARAGKHANTMFANGFRVGDNAMQGELTAPVADSRETLERLPASWHKDYALAPAFVAGQR
>NZ_CP006003.1|WP_052771317.1|9917170_9918700_-|hypothetical-protein
MVEAEAPPAARPAPLHSERGGIGLLLASGDKSAMNTVTVNTFRSLIVTETAIVNNFSLREVMDQLAVQSGVAGMTGLRLYRQLWDTQNPTPGQVNPNQHCNDQMSGSQSVFNSFPYQCRNAEGAQAGQDPFNVATQGYRAVGLFNRFDLAPADGSNCGEYRIVFARRSGENSAFQRNFMIFEAVLPNPHQDEGLDGCLPVAEFWQRLTTNPDVASRTQQLRTFYLQGLPGFRPVVHIDNYGADPATVAGQIRTNQFMQANWLLREFKLQKTCLAGTCSSLRAILSTDKVNPFGPLFSPTSTHARAEDFRFFFASQVEALARNDINLFNMDVQDQFNAGQSDAQGTENNYTFHFGNNASALRTLIQNELTRINSTLTPNQIVSRAKALSCAGCHDLSNGNNLGGGVVWPNSLGFTHVSELTEEGPEGTRFRISPALTNVFLPHRKAVLEEYLSRPRPCHNVCNPGNPIATHCSPCAAAVCEGDPFCCSGSWDVICVEAAQDVCGLACNAQ
>NZ_CP006003.1|WP_046716509.1|9919216_9919708_-|activator-of-HSP90-ATPase
MTTPQTARVTTFLTLEPQVAFEVFTEETNLWWRKGPRFRGSHAPDSVVRFEGGAGGRLVEEDAEGVFEIGRVLSWVPGAHLRFEWRGRNFAPGELTEVEVRFESAEGGTRVVLEHRGWESLRPDHPVRHGQDVAAFLAMMGMWWAGLTTALRTVASRPTPRVE
>NZ_CP006003.1|WP_046716510.1|9919725_9920067_-|ArsR-family-transcriptional-regulator
MGAARRLDETFAALADPTRRGVIDLLREEPRRAGELAAAFDMSAPAMSRHLRVLRKTGLVEEEAIEDDARVKVYRLRPERFGELRAWLDEVESFWSDQLSAFKAHAERTRKKT

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Crispr_ID: NZ_CP006003_30

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP006003_30

10347586-10351941

TypeI

Consensus_repeat	Method
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	CRISPRCasFinder
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	CRT
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGA	PILER-CR
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	PILER-CR

61 spacers

RT,cas2,cas1,cas4,cas7,cas8c,cas5,cas3

The CRISPR arrays of NZ_CP006003_30

>merge|NZ_CP006003|30|10347586-10351941|CRISPRCasFinder,CRT,PILER-CR,PILER-CR
ATTTCAACCCACGCTCCTCGCGGTCACGAGGAGCGACTTCCGCTCTCCGCCCCATGGACTGGTGCCGTCGTGTTTCAACCCACGCCCCTCGCGGTCACGAGGAGCGACCCTGATTCAGGATTTTCGGCAGACCAACACCGACCTGTTTCAACCCACGCCCCTCGCGGTCACGAGGAGCGACTCGAAGGGGCCGCGAAGCTCGCCGCTGCGGCGCTCGGTTTCAACCCACGCCCCTCGCGGTCACGAGGAGCGACGTCTCGGCGCTCATATGTCCCCCCGCACCACGACGTTTCAACCCACGCCCCTCGCGGTCACGAGGAGCAACTACGCGCCCGATGGTCATGCTCTCCTTAGCCGTCGAGTTTCAACCCACGCTCCTCGCGGTCACGAGGAGCGACGTGCCGGCGACCCAGTCGCCCTGGTACGCCGAGTTTCAACCCACGCTCCTCGCGGTCACGAGGAGCGACAGGCCGTCCGCACTGGCGCGGCGATGGGCGCACTGTTTCAACCCACGCTCCTCGCGGTCACGAGGAGCGACTCGCGCGCCTCGCCTCCCCAGTTGAGTCCGAGCAGTTTCAACCCACGCTCCTCGCGGTCACGAGGAGCGACGGCTCCAGCCGCGCGGCGTAGGCCTGGACCATCTGTTTCAACCCACGCTCCTCGCGGTCACGAGGAGCGACCTGCGAGAAAGAGGGGTCGCCGCCGGGCCGGAGAGTTTCAACCCACGCTCCTCGCGGGCACGAGGAGCGACCGTCCACCAGGCAGGACACGCACGCAAACGTGTAGCAGTTTCAACCCACGCTCCTCGCGGTCACGAGGAGCGACCAAATCCAACCGGCTAACCGCCACTCGCCCATGTTTCAACCCACGCTCCTCGCGGTCACGAGGAGCAACCGAGGAGACACGCACATGGCCTACCAGAACACGGTTTCAACCCACGCTCCTCGCGGTCACGAGGAGCGACCAGGCCGAGCGCGACGAGCGCAAGGCAGCGACGTTTCAACCCACGCTCCTCGCGGTCACGAGGAGCGACCGTGTGCATCAAGGGGCTCGACATCCCGCGCTTGTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGACGGGGTGGCGGATGTCTCCCGCCTCCACGAGCACATGTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGACATCCCGGCATTTGGGCCTCGGACGGTGAGTCCAAGTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGACGAGACGAGCAGCGAGAGGCCAATGCCGCGTCAGAGGTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGACAACGTGGACAGGCGCAACCAGCGGAGTCAGCAGTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGACCAACCTCGGCATGGCGCCAGTCTTTGGCACGAAGTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGACCGACGAACTCGGTGACATCTACTTCCTCACCGACGTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGACTGTCCAATGTTGCGTTCAGTCCGGACTATGTCAGTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGACACATGGCCGCCTGCCCGTCAGCCGTCATCATGTTGTTTCAACCCACGCTCCTCACCGTCACGAGGAGCGACTCTAGAAGTTGTCGTGTCGCTCGCTGCTGACCGGTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGACACGCTGTCCCAGTCGATGTCCGTGTGCTCATCCATGTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGACAGCACATGTCTTGGGTAGCCCCTCGAACAAGATATTTCAACCCACGCTCCTCACGGTCACGAGGAGCGACCACAACTCGGGTTTCGCTTCCAGCGCCAGCGGGGTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGACCTTGGACTGGCGGATGGTGCCGGCCTGCTGCTGGTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGACTTGACCAGGATTTCGTTACCCGCGTCCGTGATGTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGACTGTAACCCTGCTCCTCCGTCATGCGAATGGCTTCGTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGACTTCGCGCCCCTCGGGCACGGCAGGCGTTGGCTTGTGGTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGACGGCGCTCGGAGTCGTGACGATTACGGCCTACGCGTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGATCTATTCCACGGAGTCAGGCACTCATTACCGTCCGCGTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGACAGGCGCCGCTGGAGTGGCACCCGCTGCTGGCCCTGTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGACGAGGGCCGAAGATGGCCCACCCCCGATACGTGTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGACGAGTCGCTCGGCGGTGTACGTCCGCAACGACGAGTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGACAGCAGCGCGGCGAAGCACACAAGAGGCCGATATGTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGACGCCGCGACGCGTCCCGCCAACTACGAGGCGTGCAAGTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGACATGACATCCCGCCAGCTCGGCCTCGCCAACCTCGTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGACACTTCATGGCCTCGCCTGCGGCGCGAATCGCTTGATTGTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGACGACGGCCCAGCGCCTGGCGAAAGAGCTGGAGAAGTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGACGCCCGTCCTTCGTCTCGAAACCGTACATCTCGGTGTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGACTACTGTCTCCATGTTGCCAATAAACACCCGAGAGGTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGACGGGGCCCCGGCGCGGAGCTTCCGGAGCAGCGTCGTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGACGTGTCAAGAGTCCTGTGCGAATCTTCGCGCAGTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGACGGAAGGAGCGTGATGCGGCACACGAGTATGAGTCAGTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGACTTCCCCCTGCGCGTCAGCGTCGCCTTGAGAATGTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGACATGTGGCGTCTCCGTGTGCTGCGAGGATGGACAGAGTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGACGTGCGTCGATGTGGATTTGACACAGTGTACGTAGTGTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGACCAAGGCAAACGTGCCGTGGTGCTGTCTCCGAGGTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGACATCATCCGGCAAGACGTCCACATCAAACGTCTGCGGTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGACCGCAGACGGACGTCATCTCCCAGCGCAGGCACTGTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGACCGGGATCTCCAGCACGTCGCAGAGCGAACCGCAGTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGACCTGTCGGCCCCCGCGACGTCCATGGAGAAGGCGACGTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGACATATAGAGGCGCGTGCGCACGGACAGAGGCAGCAGGTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGACACTGCGACGCAGGGCGTCCAGGTTGGCATTCATGTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGACGCTCGCTGCTGGCACATCGTGGACCCAGCGTGATGTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGACAACGCCGAGCTCTTGGTGTCCCAGGTGATGCTGTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGACGCCTCGTCGCCTACGTCCAGCCCTCGGAGCCGCGACGTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGACGGCATTCGCCCTTGACCAGTCGGCCAAGTTGACGTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGACGGTGTCTACTGCTTCCAGGCGTCGGCCTCGGACGTGTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC

>NZ_CP006003|30|28|10347586-10351941|CRISPRCasFinder
ATTTCAACCCACGCTCCTCGCGGTCACGAGGAGCGAC	TTCCGCTCTCCGCCCCATGGACTGGTGCCGTCGT
GTTTCAACCCACGCCCCTCGCGGTCACGAGGAGCGAC	CCTGATTCAGGATTTTCGGCAGACCAACACCGACCT
GTTTCAACCCACGCCCCTCGCGGTCACGAGGAGCGAC	TCGAAGGGGCCGCGAAGCTCGCCGCTGCGGCGCTCG
GTTTCAACCCACGCCCCTCGCGGTCACGAGGAGCGAC	GTCTCGGCGCTCATATGTCCCCCCGCACCACGAC
GTTTCAACCCACGCCCCTCGCGGTCACGAGGAGCAAC	TACGCGCCCGATGGTCATGCTCTCCTTAGCCGTCGA
GTTTCAACCCACGCTCCTCGCGGTCACGAGGAGCGAC	GTGCCGGCGACCCAGTCGCCCTGGTACGCCGA
GTTTCAACCCACGCTCCTCGCGGTCACGAGGAGCGAC	AGGCCGTCCGCACTGGCGCGGCGATGGGCGCACT
GTTTCAACCCACGCTCCTCGCGGTCACGAGGAGCGAC	TCGCGCGCCTCGCCTCCCCAGTTGAGTCCGAGCA
GTTTCAACCCACGCTCCTCGCGGTCACGAGGAGCGAC	GGCTCCAGCCGCGCGGCGTAGGCCTGGACCATCT
GTTTCAACCCACGCTCCTCGCGGTCACGAGGAGCGAC	CTGCGAGAAAGAGGGGTCGCCGCCGGGCCGGAGA
GTTTCAACCCACGCTCCTCGCGGGCACGAGGAGCGAC	CGTCCACCAGGCAGGACACGCACGCAAACGTGTAGCA
GTTTCAACCCACGCTCCTCGCGGTCACGAGGAGCGAC	CAAATCCAACCGGCTAACCGCCACTCGCCCAT
GTTTCAACCCACGCTCCTCGCGGTCACGAGGAGCAAC	CGAGGAGACACGCACATGGCCTACCAGAACACG
GTTTCAACCCACGCTCCTCGCGGTCACGAGGAGCGAC	CAGGCCGAGCGCGACGAGCGCAAGGCAGCGAC
GTTTCAACCCACGCTCCTCGCGGTCACGAGGAGCGAC	CGTGTGCATCAAGGGGCTCGACATCCCGCGCTT
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	GGGGTGGCGGATGTCTCCCGCCTCCACGAGCACAT
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	ATCCCGGCATTTGGGCCTCGGACGGTGAGTCCAA
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	GAGACGAGCAGCGAGAGGCCAATGCCGCGTCAGAG
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	AACGTGGACAGGCGCAACCAGCGGAGTCAGCA
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	CAACCTCGGCATGGCGCCAGTCTTTGGCACGAA
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	CGACGAACTCGGTGACATCTACTTCCTCACCGAC
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	TGTCCAATGTTGCGTTCAGTCCGGACTATGTCA
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	ACATGGCCGCCTGCCCGTCAGCCGTCATCATGTT
GTTTCAACCCACGCTCCTCACCGTCACGAGGAGCGAC	TCTAGAAGTTGTCGTGTCGCTCGCTGCTGACCG
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	ACGCTGTCCCAGTCGATGTCCGTGTGCTCATCCAT
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	AGCACATGTCTTGGGTAGCCCCTCGAACAAGAT
ATTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	CACAACTCGGGTTTCGCTTCCAGCGCCAGCGGG
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	CTTGGACTGGCGGATGGTGCCGGCCTGCTGCTG
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	TTGACCAGGATTTCGTTACCCGCGTCCGTGAT
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	TGTAACCCTGCTCCTCCGTCATGCGAATGGCTTC
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	TTCGCGCCCCTCGGGCACGGCAGGCGTTGGCTTGTG
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	GGCGCTCGGAGTCGTGACGATTACGGCCTACGC
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAT	CTATTCCACGGAGTCAGGCACTCATTACCGTCCGC
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	AGGCGCCGCTGGAGTGGCACCCGCTGCTGGCCCT
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	GAGGGCCGAAGATGGCCCACCCCCGATACGT
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	GAGTCGCTCGGCGGTGTACGTCCGCAACGACGA
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	AGCAGCGCGGCGAAGCACACAAGAGGCCGATAT
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	GCCGCGACGCGTCCCGCCAACTACGAGGCGTGCAA
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	ATGACATCCCGCCAGCTCGGCCTCGCCAACCTC
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	ACTTCATGGCCTCGCCTGCGGCGCGAATCGCTTGATT
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	GACGGCCCAGCGCCTGGCGAAAGAGCTGGAGAA
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	GCCCGTCCTTCGTCTCGAAACCGTACATCTCGGT
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	TACTGTCTCCATGTTGCCAATAAACACCCGAGAG
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	GGGGCCCCGGCGCGGAGCTTCCGGAGCAGCGTC
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	GTGTCAAGAGTCCTGTGCGAATCTTCGCGCA
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	GGAAGGAGCGTGATGCGGCACACGAGTATGAGTCA
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	TTCCCCCTGCGCGTCAGCGTCGCCTTGAGAAT
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	ATGTGGCGTCTCCGTGTGCTGCGAGGATGGACAGA
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	GTGCGTCGATGTGGATTTGACACAGTGTACGTAGT
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	CAAGGCAAACGTGCCGTGGTGCTGTCTCCGAG
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	ATCATCCGGCAAGACGTCCACATCAAACGTCTGCG
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	CGCAGACGGACGTCATCTCCCAGCGCAGGCACT
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	CGGGATCTCCAGCACGTCGCAGAGCGAACCGCA
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	CTGTCGGCCCCCGCGACGTCCATGGAGAAGGCGAC
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	ATATAGAGGCGCGTGCGCACGGACAGAGGCAGCAG
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	ACTGCGACGCAGGGCGTCCAGGTTGGCATTCAT
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	GCTCGCTGCTGGCACATCGTGGACCCAGCGTGAT
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	AACGCCGAGCTCTTGGTGTCCCAGGTGATGCT
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	GCCTCGTCGCCTACGTCCAGCCCTCGGAGCCGCGAC
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	GGCATTCGCCCTTGACCAGTCGGCCAAGTTGAC
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	GGTGTCTACTGCTTCCAGGCGTCGGCCTCGGACGT
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC

>NZ_CP006003|30|2|10347586-10351941|CRT
ATTTCAACCCACGCTCCTCGCGGTCACGAGGAGCGAC	TTCCGCTCTCCGCCCCATGGACTGGTGCCGTCGT
GTTTCAACCCACGCCCCTCGCGGTCACGAGGAGCGAC	CCTGATTCAGGATTTTCGGCAGACCAACACCGACCT
GTTTCAACCCACGCCCCTCGCGGTCACGAGGAGCGAC	TCGAAGGGGCCGCGAAGCTCGCCGCTGCGGCGCTCG
GTTTCAACCCACGCCCCTCGCGGTCACGAGGAGCGAC	GTCTCGGCGCTCATATGTCCCCCCGCACCACGAC
GTTTCAACCCACGCCCCTCGCGGTCACGAGGAGCAAC	TACGCGCCCGATGGTCATGCTCTCCTTAGCCGTCGA
GTTTCAACCCACGCTCCTCGCGGTCACGAGGAGCGAC	GTGCCGGCGACCCAGTCGCCCTGGTACGCCGA
GTTTCAACCCACGCTCCTCGCGGTCACGAGGAGCGAC	AGGCCGTCCGCACTGGCGCGGCGATGGGCGCACT
GTTTCAACCCACGCTCCTCGCGGTCACGAGGAGCGAC	TCGCGCGCCTCGCCTCCCCAGTTGAGTCCGAGCA
GTTTCAACCCACGCTCCTCGCGGTCACGAGGAGCGAC	GGCTCCAGCCGCGCGGCGTAGGCCTGGACCATCT
GTTTCAACCCACGCTCCTCGCGGTCACGAGGAGCGAC	CTGCGAGAAAGAGGGGTCGCCGCCGGGCCGGAGA
GTTTCAACCCACGCTCCTCGCGGGCACGAGGAGCGAC	CGTCCACCAGGCAGGACACGCACGCAAACGTGTAGCA
GTTTCAACCCACGCTCCTCGCGGTCACGAGGAGCGAC	CAAATCCAACCGGCTAACCGCCACTCGCCCAT
GTTTCAACCCACGCTCCTCGCGGTCACGAGGAGCAAC	CGAGGAGACACGCACATGGCCTACCAGAACACG
GTTTCAACCCACGCTCCTCGCGGTCACGAGGAGCGAC	CAGGCCGAGCGCGACGAGCGCAAGGCAGCGAC
GTTTCAACCCACGCTCCTCGCGGTCACGAGGAGCGAC	CGTGTGCATCAAGGGGCTCGACATCCCGCGCTT
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	GGGGTGGCGGATGTCTCCCGCCTCCACGAGCACAT
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	ATCCCGGCATTTGGGCCTCGGACGGTGAGTCCAA
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	GAGACGAGCAGCGAGAGGCCAATGCCGCGTCAGAG
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	AACGTGGACAGGCGCAACCAGCGGAGTCAGCA
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	CAACCTCGGCATGGCGCCAGTCTTTGGCACGAA
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	CGACGAACTCGGTGACATCTACTTCCTCACCGAC
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	TGTCCAATGTTGCGTTCAGTCCGGACTATGTCA
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	ACATGGCCGCCTGCCCGTCAGCCGTCATCATGTT
GTTTCAACCCACGCTCCTCACCGTCACGAGGAGCGAC	TCTAGAAGTTGTCGTGTCGCTCGCTGCTGACCG
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	ACGCTGTCCCAGTCGATGTCCGTGTGCTCATCCAT
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	AGCACATGTCTTGGGTAGCCCCTCGAACAAGAT
ATTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	CACAACTCGGGTTTCGCTTCCAGCGCCAGCGGG
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	CTTGGACTGGCGGATGGTGCCGGCCTGCTGCTG
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	TTGACCAGGATTTCGTTACCCGCGTCCGTGAT
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	TGTAACCCTGCTCCTCCGTCATGCGAATGGCTTC
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	TTCGCGCCCCTCGGGCACGGCAGGCGTTGGCTTGTG
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	GGCGCTCGGAGTCGTGACGATTACGGCCTACGC
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAT	CTATTCCACGGAGTCAGGCACTCATTACCGTCCGC
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	AGGCGCCGCTGGAGTGGCACCCGCTGCTGGCCCT
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	GAGGGCCGAAGATGGCCCACCCCCGATACGT
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	GAGTCGCTCGGCGGTGTACGTCCGCAACGACGA
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	AGCAGCGCGGCGAAGCACACAAGAGGCCGATAT
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	GCCGCGACGCGTCCCGCCAACTACGAGGCGTGCAA
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	ATGACATCCCGCCAGCTCGGCCTCGCCAACCTC
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	ACTTCATGGCCTCGCCTGCGGCGCGAATCGCTTGATT
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	GACGGCCCAGCGCCTGGCGAAAGAGCTGGAGAA
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	GCCCGTCCTTCGTCTCGAAACCGTACATCTCGGT
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	TACTGTCTCCATGTTGCCAATAAACACCCGAGAG
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	GGGGCCCCGGCGCGGAGCTTCCGGAGCAGCGTC
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	GTGTCAAGAGTCCTGTGCGAATCTTCGCGCA
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	GGAAGGAGCGTGATGCGGCACACGAGTATGAGTCA
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	TTCCCCCTGCGCGTCAGCGTCGCCTTGAGAAT
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	ATGTGGCGTCTCCGTGTGCTGCGAGGATGGACAGA
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	GTGCGTCGATGTGGATTTGACACAGTGTACGTAGT
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	CAAGGCAAACGTGCCGTGGTGCTGTCTCCGAG
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	ATCATCCGGCAAGACGTCCACATCAAACGTCTGCG
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	CGCAGACGGACGTCATCTCCCAGCGCAGGCACT
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	CGGGATCTCCAGCACGTCGCAGAGCGAACCGCA
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	CTGTCGGCCCCCGCGACGTCCATGGAGAAGGCGAC
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	ATATAGAGGCGCGTGCGCACGGACAGAGGCAGCAG
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	ACTGCGACGCAGGGCGTCCAGGTTGGCATTCAT
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	GCTCGCTGCTGGCACATCGTGGACCCAGCGTGAT
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	AACGCCGAGCTCTTGGTGTCCCAGGTGATGCT
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	GCCTCGTCGCCTACGTCCAGCCCTCGGAGCCGCGAC
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	GGCATTCGCCCTTGACCAGTCGGCCAAGTTGAC
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	GGTGTCTACTGCTTCCAGGCGTCGGCCTCGGACGT
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC

>NZ_CP006003|30|2|10347587-10350031|PILER-CR
TTTCAACCCACGCTCCTCGCGGTCACGAGGAGCGAC	TTCCGCTCTCCGCCCCATGGACTGGTGCCGTCGTG
TTTCAACCCACGCCCCTCGCGGTCACGAGGAGCGAC	CCTGATTCAGGATTTTCGGCAGACCAACACCGACCTG
TTTCAACCCACGCCCCTCGCGGTCACGAGGAGCGAC	TCGAAGGGGCCGCGAAGCTCGCCGCTGCGGCGCTCGG
TTTCAACCCACGCCCCTCGCGGTCACGAGGAGCGAC	GTCTCGGCGCTCATATGTCCCCCCGCACCACGACG
TTTCAACCCACGCCCCTCGCGGTCACGAGGAGCAAC	TACGCGCCCGATGGTCATGCTCTCCTTAGCCGTCGAG
TTTCAACCCACGCTCCTCGCGGTCACGAGGAGCGAC	GTGCCGGCGACCCAGTCGCCCTGGTACGCCGAG
TTTCAACCCACGCTCCTCGCGGTCACGAGGAGCGAC	AGGCCGTCCGCACTGGCGCGGCGATGGGCGCACTG
TTTCAACCCACGCTCCTCGCGGTCACGAGGAGCGAC	TCGCGCGCCTCGCCTCCCCAGTTGAGTCCGAGCAG
TTTCAACCCACGCTCCTCGCGGTCACGAGGAGCGAC	GGCTCCAGCCGCGCGGCGTAGGCCTGGACCATCTG
TTTCAACCCACGCTCCTCGCGGTCACGAGGAGCGAC	CTGCGAGAAAGAGGGGTCGCCGCCGGGCCGGAGAG
TTTCAACCCACGCTCCTCGCGGGCACGAGGAGCGAC	CGTCCACCAGGCAGGACACGCACGCAAACGTGTAGCAG
TTTCAACCCACGCTCCTCGCGGTCACGAGGAGCGAC	CAAATCCAACCGGCTAACCGCCACTCGCCCATG
TTTCAACCCACGCTCCTCGCGGTCACGAGGAGCAAC	CGAGGAGACACGCACATGGCCTACCAGAACACGG
TTTCAACCCACGCTCCTCGCGGTCACGAGGAGCGAC	CAGGCCGAGCGCGACGAGCGCAAGGCAGCGACG
TTTCAACCCACGCTCCTCGCGGTCACGAGGAGCGAC	CGTGTGCATCAAGGGGCTCGACATCCCGCGCTTG
TTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	GGGGTGGCGGATGTCTCCCGCCTCCACGAGCACATG
TTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	ATCCCGGCATTTGGGCCTCGGACGGTGAGTCCAAG
TTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	GAGACGAGCAGCGAGAGGCCAATGCCGCGTCAGAGG
TTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	AACGTGGACAGGCGCAACCAGCGGAGTCAGCAG
TTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	CAACCTCGGCATGGCGCCAGTCTTTGGCACGAAG
TTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	CGACGAACTCGGTGACATCTACTTCCTCACCGACG
TTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	TGTCCAATGTTGCGTTCAGTCCGGACTATGTCAG
TTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	ACATGGCCGCCTGCCCGTCAGCCGTCATCATGTTG
TTTCAACCCACGCTCCTCACCGTCACGAGGAGCGAC	TCTAGAAGTTGTCGTGTCGCTCGCTGCTGACCGG
TTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	ACGCTGTCCCAGTCGATGTCCGTGTGCTCATCCATG
TTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	AGCACATGTCTTGGGTAGCCCCTCGAACAAGATA
TTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	CACAACTCGGGTTTCGCTTCCAGCGCCAGCGGGG
TTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	CTTGGACTGGCGGATGGTGCCGGCCTGCTGCTGG
TTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	TTGACCAGGATTTCGTTACCCGCGTCCGTGATG
TTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	TGTAACCCTGCTCCTCCGTCATGCGAATGGCTTCG
TTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	TTCGCGCCCCTCGGGCACGGCAGGCGTTGGCTTGTGG
TTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	GGCGCTCGGAGTCGTGACGATTACGGCCTACGCG
TTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAT	CTATTCCACGGAGTCAGGCACTCATTACCGTCCGCG
TTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	AGGCGCCGCTGGAGTGGCACCCGCTGCTGGCCCTG
TTTCAACCCACGCTCCTCACGGTCACGAGGAGCGACGAGGGCCGAAGATGGCCCACCCCCGATACGTGTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGACGAGTCGCTCGGCGGTGTACGTCCGCAACGACGAGTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	AGCAGCGCGGCGAAGCACACAAGAGGCCGATAT
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	GCCGCGACGCGTCCCGCCAACTACGAGGCGTGCAA
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	ATGACATCCCGCCAGCTCGGCCTCGCCAACCTC
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	ACTTCATGGCCTCGCCTGCGGCGCGAATCGCTTGATT
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	GACGGCCCAGCGCCTGGCGAAAGAGCTGGAGAA
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	GCCCGTCCTTCGTCTCGAAACCGTACATCTCGGT
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	TACTGTCTCCATGTTGCCAATAAACACCCGAGAG
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	GGGGCCCCGGCGCGGAGCTTCCGGAGCAGCGTC
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	GTGTCAAGAGTCCTGTGCGAATCTTCGCGCA
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	GGAAGGAGCGTGATGCGGCACACGAGTATGAGTCA
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	TTCCCCCTGCGCGTCAGCGTCGCCTTGAGAAT
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	ATGTGGCGTCTCCGTGTGCTGCGAGGATGGACAGA
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	GTGCGTCGATGTGGATTTGACACAGTGTACGTAGT
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	CAAGGCAAACGTGCCGTGGTGCTGTCTCCGAG
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	ATCATCCGGCAAGACGTCCACATCAAACGTCTGCG
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	CGCAGACGGACGTCATCTCCCAGCGCAGGCACT
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	CGGGATCTCCAGCACGTCGCAGAGCGAACCGCA
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	CTGTCGGCCCCCGCGACGTCCATGGAGAAGGCGAC
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	ATATAGAGGCGCGTGCGCACGGACAGAGGCAGCAG
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	ACTGCGACGCAGGGCGTCCAGGTTGGCATTCAT
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	GCTCGCTGCTGGCACATCGTGGACCCAGCGTGAT
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	AACGCCGAGCTCTTGGTGTCCCAGGTGATGCT
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	GCCTCGTCGCCTACGTCCAGCCCTCGGAGCCGCGAC
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	GGCATTCGCCCTTGACCAGTCGGCCAAGTTGAC
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	GGTGTCTACTGCTTCCAGGCGTCGGCCTCGGACGT


>NZ_CP006003|30|3|10350134-10351941|PILER-CR
	TTCCGCTCTCCGCCCCATGGACTGGTGCCGTCGTG
TTTCAACCCACGCCCCTCGCGGTCACGAGGAGCGAC	CCTGATTCAGGATTTTCGGCAGACCAACACCGACCTG
TTTCAACCCACGCCCCTCGCGGTCACGAGGAGCGAC	TCGAAGGGGCCGCGAAGCTCGCCGCTGCGGCGCTCGG
TTTCAACCCACGCCCCTCGCGGTCACGAGGAGCGAC	GTCTCGGCGCTCATATGTCCCCCCGCACCACGACG
TTTCAACCCACGCCCCTCGCGGTCACGAGGAGCAAC	TACGCGCCCGATGGTCATGCTCTCCTTAGCCGTCGAG
TTTCAACCCACGCTCCTCGCGGTCACGAGGAGCGAC	GTGCCGGCGACCCAGTCGCCCTGGTACGCCGAG
TTTCAACCCACGCTCCTCGCGGTCACGAGGAGCGAC	AGGCCGTCCGCACTGGCGCGGCGATGGGCGCACTG
TTTCAACCCACGCTCCTCGCGGTCACGAGGAGCGAC	TCGCGCGCCTCGCCTCCCCAGTTGAGTCCGAGCAG
TTTCAACCCACGCTCCTCGCGGTCACGAGGAGCGAC	GGCTCCAGCCGCGCGGCGTAGGCCTGGACCATCTG
TTTCAACCCACGCTCCTCGCGGTCACGAGGAGCGAC	CTGCGAGAAAGAGGGGTCGCCGCCGGGCCGGAGAG
TTTCAACCCACGCTCCTCGCGGGCACGAGGAGCGAC	CGTCCACCAGGCAGGACACGCACGCAAACGTGTAGCAG
TTTCAACCCACGCTCCTCGCGGTCACGAGGAGCGAC	CAAATCCAACCGGCTAACCGCCACTCGCCCATG
TTTCAACCCACGCTCCTCGCGGTCACGAGGAGCAAC	CGAGGAGACACGCACATGGCCTACCAGAACACGG
TTTCAACCCACGCTCCTCGCGGTCACGAGGAGCGAC	CAGGCCGAGCGCGACGAGCGCAAGGCAGCGACG
TTTCAACCCACGCTCCTCGCGGTCACGAGGAGCGAC	CGTGTGCATCAAGGGGCTCGACATCCCGCGCTTG
TTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	GGGGTGGCGGATGTCTCCCGCCTCCACGAGCACATG
TTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	ATCCCGGCATTTGGGCCTCGGACGGTGAGTCCAAG
TTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	GAGACGAGCAGCGAGAGGCCAATGCCGCGTCAGAGG
TTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	AACGTGGACAGGCGCAACCAGCGGAGTCAGCAG
TTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	CAACCTCGGCATGGCGCCAGTCTTTGGCACGAAG
TTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	CGACGAACTCGGTGACATCTACTTCCTCACCGACG
TTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	TGTCCAATGTTGCGTTCAGTCCGGACTATGTCAG
TTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	ACATGGCCGCCTGCCCGTCAGCCGTCATCATGTTG
TTTCAACCCACGCTCCTCACCGTCACGAGGAGCGAC	TCTAGAAGTTGTCGTGTCGCTCGCTGCTGACCGG
TTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	ACGCTGTCCCAGTCGATGTCCGTGTGCTCATCCATG
TTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	AGCACATGTCTTGGGTAGCCCCTCGAACAAGATA
TTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	CACAACTCGGGTTTCGCTTCCAGCGCCAGCGGGG
TTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	CTTGGACTGGCGGATGGTGCCGGCCTGCTGCTGG
TTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	TTGACCAGGATTTCGTTACCCGCGTCCGTGATG
TTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	TGTAACCCTGCTCCTCCGTCATGCGAATGGCTTCG
TTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	TTCGCGCCCCTCGGGCACGGCAGGCGTTGGCTTGTGG
TTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	GGCGCTCGGAGTCGTGACGATTACGGCCTACGCG
TTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAT	CTATTCCACGGAGTCAGGCACTCATTACCGTCCGCG
TTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	AGGCGCCGCTGGAGTGGCACCCGCTGCTGGCCCTG
TTTCAACCCACGCTCCTCACGGTCACGAGGAGCGACGAGGGCCGAAGATGGCCCACCCCCGATACGTGTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGACGAGTCGCTCGGCGGTGTACGTCCGCAACGACGAGTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	AGCAGCGCGGCGAAGCACACAAGAGGCCGATAT
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	GCCGCGACGCGTCCCGCCAACTACGAGGCGTGCAA
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	ATGACATCCCGCCAGCTCGGCCTCGCCAACCTC
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	ACTTCATGGCCTCGCCTGCGGCGCGAATCGCTTGATT
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	GACGGCCCAGCGCCTGGCGAAAGAGCTGGAGAA
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	GCCCGTCCTTCGTCTCGAAACCGTACATCTCGGT
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	TACTGTCTCCATGTTGCCAATAAACACCCGAGAG
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	GGGGCCCCGGCGCGGAGCTTCCGGAGCAGCGTC
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	GTGTCAAGAGTCCTGTGCGAATCTTCGCGCA
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	GGAAGGAGCGTGATGCGGCACACGAGTATGAGTCA
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	TTCCCCCTGCGCGTCAGCGTCGCCTTGAGAAT
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	ATGTGGCGTCTCCGTGTGCTGCGAGGATGGACAGA
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	GTGCGTCGATGTGGATTTGACACAGTGTACGTAGT
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	CAAGGCAAACGTGCCGTGGTGCTGTCTCCGAG
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	ATCATCCGGCAAGACGTCCACATCAAACGTCTGCG
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	CGCAGACGGACGTCATCTCCCAGCGCAGGCACT
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	CGGGATCTCCAGCACGTCGCAGAGCGAACCGCA
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	CTGTCGGCCCCCGCGACGTCCATGGAGAAGGCGAC
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	ATATAGAGGCGCGTGCGCACGGACAGAGGCAGCAG
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	ACTGCGACGCAGGGCGTCCAGGTTGGCATTCAT
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	GCTCGCTGCTGGCACATCGTGGACCCAGCGTGAT
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	AACGCCGAGCTCTTGGTGTCCCAGGTGATGCT
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	GCCTCGTCGCCTACGTCCAGCCCTCGGAGCCGCGAC
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	GGCATTCGCCCTTGACCAGTCGGCCAAGTTGAC
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC	GGTGTCTACTGCTTCCAGGCGTCGGCCTCGGACGT
GTTTCAACCCACGCTCCTCACGGTCACGAGGAGCGAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP006003.1\|WP_082165494.1\|10356821_10357478_-\|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09651_cas5_CAS-I-C	gnl\|CDD\|187782
NZ_CP006003.1\|WP_046716804.1\|10353468_10354128_-\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|366863
NZ_CP006003.1\|WP_046716800.1\|10345180_10345903_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|370549
NZ_CP006003.1\|WP_046716801.1\|10345955_10346678_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|370549
NZ_CP006003.1\|WP_046716797.1\|10342679_10343960_+\|RNA-directed-DNA-polymerase	RT	pfam00078_RT_CAS-I:CAS-III	gnl\|CDD\|239569
NZ_CP006003.1\|WP_046716805.1\|10354124_10355039_-\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	cd09689_cas7_CAS-I-C	gnl\|CDD\|274216
NZ_CP006003.1\|WP_046716798.1\|10344094_10344445_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046716793.1\|10336039_10336495_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046716795.1\|10338293_10338887_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046716806.1\|10355076_10356825_-\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	cd09642_cas8c_CAS-I-C	gnl\|CDD\|273839
NZ_CP006003.1\|WP_046716796.1\|10338939_10340889_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_052771488.1\|10357491_10359717_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|350688
NZ_CP006003.1\|WP_046716799.1\|10344496_10345189_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|283403
NZ_CP006003.1\|WP_082165495.1\|10359865_10361464_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379080
NZ_CP006003.1\|WP_046716811.1\|10363246_10363960_+\|esterase	unknown	unknown	gnl\|CDD\|227283
NZ_CP006003.1\|WP_046716803.1\|10352443_10353472_-\|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|187852
NZ_CP006003.1\|WP_082165493.1\|10346684_10347356_-\|DUF2380-domain-containing-protein	unknown	unknown	gnl\|CDD\|370548
NZ_CP006003.1\|WP_046716802.1\|10352144_10352444_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP006003.1\|WP_046716810.1\|10361620_10363129_+\|aldehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|365919
NZ_CP006003.1\|WP_082165492.1\|10336896_10338249_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|184118

Protein	Function_ID	Function_description	E-value
NZ_CP006003.1\|WP_082165494.1\|10356821_10357478_-\|type-I-C-CRISPR-associated-protein-Cas5	gnl\|CDD\|187782	cd09651, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex; in subtype I-C this protein might be the endoribonuclease that generates crRNAs; also known as DevS family.	1.49138e-84
NZ_CP006003.1\|WP_046716804.1\|10353468_10354128_-\|CRISPR-associated-protein-Cas4	gnl\|CDD\|366863	pfam01930, Cas_Cas4, Domain of unknown function DUF83. This domain has no known function. The domain contains three conserved cysteines at its C-terminus.	9.60852e-36
NZ_CP006003.1\|WP_046716800.1\|10345180_10345903_-\|hypothetical-protein	gnl\|CDD\|370549	pfam09535, Gmx_para_CXXCG, Protein of unknown function (Gmx_para_CXXCG). This entry consists of at least 10 paralogous proteins from Myxococcus xanthus and that lack detectable sequence similarity to any other protein family. An imperfectly conserved CXXCG motif, a probable binding site, appears twice in the multiple sequence alignment.	2.30422e-93
NZ_CP006003.1\|WP_046716801.1\|10345955_10346678_-\|hypothetical-protein	gnl\|CDD\|370549	pfam09535, Gmx_para_CXXCG, Protein of unknown function (Gmx_para_CXXCG). This entry consists of at least 10 paralogous proteins from Myxococcus xanthus and that lack detectable sequence similarity to any other protein family. An imperfectly conserved CXXCG motif, a probable binding site, appears twice in the multiple sequence alignment.	1.64656e-99
NZ_CP006003.1\|WP_046716797.1\|10342679_10343960_+\|RNA-directed-DNA-polymerase	gnl\|CDD\|239569	cd03487, RT_Bac_retron_II, RT_Bac_retron_II: Reverse transcriptases (RTs) in bacterial retrotransposons or retrons. The polymerase reaction of this enzyme leads to the production of a unique RNA-DNA complex called msDNA (multicopy single-stranded (ss)DNA) in which a small ssDNA branches out from a small ssRNA molecule via a 2'-5'phosphodiester linkage. Bacterial retron RTs produce cDNA corresponding to only a small portion of the retron genome.	4.70847e-80
NZ_CP006003.1\|WP_046716805.1\|10354124_10355039_-\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl\|CDD\|274216	TIGR02589, conserved_hypothetical_protein, CRISPR-associated protein Cas7/Csd2, subtype I-C/DVULG. This model represents one of two closely related CRISPR-associated proteins that belong to the larger family of TIGR01595. Members are the Csd2 protein of the Dvulg subtype of CRISPR/cas system. CRISPR stands for Clustered Regularly Interspaced Short Palindromic Repeats. The related model is TIGR02590, the Csh2 protein of the Hmari CRISPR subtype.	6.89712e-155
NZ_CP006003.1\|WP_082165493.1\|10346684_10347356_-\|DUF2380-domain-containing-protein	gnl\|CDD\|370548	pfam09533, DUF2380, Predicted lipoprotein of unknown function (DUF2380). This family consists of at least 9 paralogs in Myxococcus xanthus, a member of the Deltaproteobacteria. One appears truncated toward the N-terminus; the others are predicted lipoproteins. The function is unknown.	2.45006e-94
NZ_CP006003.1\|WP_046716806.1\|10355076_10356825_-\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl\|CDD\|273839	TIGR01863, CRISPR-associated_protein_CT1133_family, CRISPR-associated protein Cas8c/Csd1, subtype I-C/DVULG. CRISPR loci appear to be mobile elements with a wide host range. This model represents a protein that tends to be found near CRISPR repeats of the DVULG subtype of CRISPR/Cas locus. We designate this family Csd1 (CRISPR/Cas Subtype DVULG protein 1). The species range for this subtype, so far, is exclusively bacterial and mesophilic, although CRISPR loci in general are particularly common among archaea and thermophilic bacteria. In a few species (Xanthomonas axonopodis pv. citri str. 306 and Streptococcus mutans UA159), homology to this protein family is split across two tandem genes; the trusted cutoff to this family is set low enough to capture at least the longer of the two.	1.74187e-178
NZ_CP006003.1\|WP_052771488.1\|10357491_10359717_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|350688	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3. CRISPR-associated (Cas) 3 is a nuclease-helicase responsible for degradation of dsDNA. The two enzymatic units of Cas3, a histidine-aspartate (HD) nuclease and a Superfamily 2 (SF2) helicase, may be expressed from separate genes as Cas3' (SF2 helicase) and Cas3'' (HD nuclease) or may be fused as a single HD-SF2 polypeptide. The nucleolytic activity of most Cas3 enzymes is transition metal ion-dependent. Cas3 is a member of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	3.78971e-52
NZ_CP006003.1\|WP_046716799.1\|10344496_10345189_+\|hypothetical-protein	gnl\|CDD\|283403	pfam05728, UPF0227, Uncharacterized protein family (UPF0227). Despite being classed as uncharacterized proteins, the members of this family are almost certainly enzymes that are distantly related to the pfam00561.	6.19357e-14
NZ_CP006003.1\|WP_082165495.1\|10359865_10361464_+\|hypothetical-protein	gnl\|CDD\|379080	pfam13231, PMT_2, Dolichyl-phosphate-mannose-protein mannosyltransferase. This family contains members that are not captured by pfam02366.	0.000497325
NZ_CP006003.1\|WP_046716811.1\|10363246_10363960_+\|esterase	gnl\|CDD\|227283	COG4947, COG4947, Uncharacterized protein conserved in bacteria [Function unknown].	4.04437e-74
NZ_CP006003.1\|WP_046716803.1\|10352443_10353472_-\|type-I-C-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|187852	cd09721, Cas1_I-C, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer integration; Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	6.36931e-177
NZ_CP006003.1\|WP_046716802.1\|10352144_10352444_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	7.81596e-26
NZ_CP006003.1\|WP_046716810.1\|10361620_10363129_+\|aldehyde-dehydrogenase	gnl\|CDD\|365919	pfam00171, Aldedh, Aldehyde dehydrogenase family. This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity.	4.54716e-102
NZ_CP006003.1\|WP_082165492.1\|10336896_10338249_-\|AAA-family-ATPase	gnl\|CDD\|184118	PRK13531, PRK13531, regulatory ATPase RavA; Provisional.	8.31749e-38

>NZ_CP006003.1|WP_082165493.1|10346684_10347356_-|DUF2380-domain-containing-protein
MPTLRAFWLSLFVVSWMGCSTHGKPPMQLAWETAEVECEDPREDGCVVLLCAEDACGFFPCEDSPRTVELARFPPARPPAAAAAPGGGPRRNWGGAQKLPRGALMTFPNWNGAPEQLIPPSRQLSTGRWEKHHLFPQEEELRLWFEQRGVKIHDYTMPIPRDLHQRIHSTGGRGGQWNEAWREFKKNNPRAPPKEIFKHAGELIYRFQLMGGPIQPYYAKPGA
>NZ_CP006003.1|WP_046716801.1|10345955_10346678_-|hypothetical-protein
MTRFYWVDEDIEVARKYGGEAHGAPQWALPGLMQCPACGETWSDVGHHFPGVSLTALPQRREFERARPEPFPEFVRLRELVRPLVPSEEALPPGAGFGPLVGTAVGKFPAFAWIIEVLLIQTEVLGQLHAQGMRNLQGYPTALRARRNPPPELLELHVLPRGRLHGDCFPPDEPPPCPTCGWFGLRRPEEPILDEASLPSDLDLFRVGNFATMVICTERFKDVVERLGLDGLTFRELPIR
>NZ_CP006003.1|WP_046716800.1|10345180_10345903_-|hypothetical-protein
MGRFFCIGEDTEAVAGYGGSFNAEHRWFLPGVKDCPGCRTSWSDLGCSYPSVDLSCLAEHRSFEENRSEPFTEFVRLRELVRPLLPPGSPLPPDTELGPLTGKALGKFPSFSWFIASLVVNHGDLESLQEHGLTGLVGHPTALTARQKPVTDLVELEVLSLGSLHPACFPRNTPAPCSTCGRLALRRPDKPILDAASLPTDLDLFRLANFSALLIVTERFKDAVEALGLDGLTFVEVASR
>NZ_CP006003.1|WP_046716799.1|10344496_10345189_+|hypothetical-protein
MSDLPPAPAPLAPRFMYLHGFASGPNSTKGLALSRHFEPRGLHIERLNLRVPSFEELKLSAITDTVRAALGGKQDRVVLLGSSLGGLTAARVAAEDARVCGLVLMAPAFHIVTQLRKRMGEAFWEHWRTSGWIPTEDFVEKRTSRVHWGFVEDALALDEHLGNWPDVRVPTLLIHGRADDTCDIANSRRWAQGRRNVKLVEVDDGHELTASLPFILEQTEAFLRPWGGSA
>NZ_CP006003.1|WP_046716798.1|10344094_10344445_+|hypothetical-protein
MANAARFAFTQPSSPGVEFVIELTDENTISHARKILSGEEKNRIHVHGRIIKRTQPYNPRFSFYLDPSTINFFEQAIEVCDANMTYVEDHLDEAGGAFLPGGHWCPWDSRLAREVK
>NZ_CP006003.1|WP_046716797.1|10342679_10343960_+|RNA-directed-DNA-polymerase
MSWFDSTLGWFKGLFTPKPVTRDVSRLDGSARDASGRAADVVRETVATSGPLKPGHRREIIRDARLLPKGRRVYTPGRKPLLTRSEARRFFSATFRTRNRDVRDLLTDEAQLTRYGLPVWRTEEDVAAALELTVGQLRHYATHRVRERVSHYVTFSVPKRSGGTRLLHAPKRKLKALQRRLLTLLVAKLPRSEHAHGFVSGRSIKTGAAPHVGRRVVLKLDVKDFFPSVTVGRVRGLLLALGYGYPVAATLAVLMTEAERQPVEVEGTVFHVPVGPRSCVQGAPTSPGLCNAVVMRLDRRLAGLARRYGYTYTRYADDLTFSGDDVGALERVRALAARYVRDEGFEVNAAKTRVQRRGGRQRVTGVTVNAGLGLSREERRKLRAMIHQEDGGDAKQGARIDGMLAYVKMLNPEHAARLARRRKPRG
>NZ_CP006003.1|WP_046716796.1|10338939_10340889_+|hypothetical-protein
MSESWEQRRRREAREMDAAIRSTFARRQSNAELRAQLEALAQRPWFREFSWLWGPSLHVRDRVLFRPLILSWLRVGNLTAAGKWVDPWQGENAAALETWLADADRHDDVEVFRRLYEWRQQGLGMKKAETRWREDLTKRFRDARTRAARQLVLTKLDVETGRLDEATALALDDVDAELARPFIRQRLPFAWGPGVPQEKQHAMWTTLRERLLARGDTEQAGAIYRRLVTEDAWRADVFALTQSVTDAQALVRALEEHHPDVAPTGAAEVFVELAEKRGRDVVPYLLAHLSAVFPRWTGYGFRGKRKNAKGLPELLELCRVRGWEDVWGTALRTSATAETFDQEVLALVHDAKADPAVTRGRLLQVAGTGGEWNRPGLGITRVLPLTDTTAVMLYARFPELLRGPFRMHVSSGWHSSYPELVGRALERRDEELLDFLASRAATQAQPTHASNKRQREWIRVLDALATHYEELPKEDGVFARRAANVLGAIPAYAIWADKTLLSQNRLARLLLMRSDELYLADPRAVRDLLESPQIHVQALAFRLLGRDAPRARELAASNTDVLQAALLRPLHRRTRLMAFSALTNAALQDVDTARRLLARMRDAFALPDQRYPKEELVEMLAKVLQRWPELRGPAETPRVFSAPTKEASP
>NZ_CP006003.1|WP_046716795.1|10338293_10338887_+|hypothetical-protein
MKKMSKWVALVGVLGVGTQAVADGWHGYASLGAGITLDHLSDLRAKGPALHGYLGVESPPGLSIGLLAEVSETWGNELRDAARQDRLERTQLDYKAVGIEARLRFFRDKPINPWVGARLSKSWGSTFAPDEFGTFLRKNVDTTSMAFRVGVDGWFSSRWGISAATAFQFCDVKLSRESVNECAKLLQSVIVGPVVRF
>NZ_CP006003.1|WP_082165492.1|10336896_10338249_-|AAA-family-ATPase
MSCHEGRWRPVTKALSVGLVAIPLALESRHREAGVCRLEGVRGLFAPARSAVRLSCMSVTFEAAASAVRDALSDAGRGLVEREAMVELIALSAVAGEHLLVIGPPGTAKSEAVRRTARALGGSYFEYLLGRFTEPSELFGPVDLRKLREGLVETQTTGMLPEADVAFLDEVFLGSTAILNTLLGLLNERTFRRGHTRMRCPLRVCVGAANALPEDESLAAFADRFLARIFVEPVPDPRLEDLLTGGAMPWDAEGGRWVSLETLDVLSRAAREADLAGVRPQLAHALRSLRAAGLGLSDRRAVKAQRLVAAAGVLAGRSVPTASDLWPLVYVVPTKEGQALARDVLRDVLASSENPALAAAALEASAGPRARAQRLAQAGQALLAERPASDSAEALAVWRLKLEGVAREMDASFAPESLSDDLKVLRAGLTEALAVNGAVSYETVARVQGV
>NZ_CP006003.1|WP_046716793.1|10336039_10336495_-|hypothetical-protein
MSSETQGALPVRWGPRAQPLEPLAVVGVGDVARALARRVLLEDDARLSSWSGVAGRGVLVLLGAVESLPWVDGVTYLGREVSAPSLLLPCALAPEVLVSVLERALLSRVEVGGTPWAVLPSGPWLLSVASARPVHRATLAAWLADEEGGAS
>NZ_CP006003.1|WP_046716802.1|10352144_10352444_-|CRISPR-associated-endonuclease-Cas2
MRKVTVLVCYDVQVSDPTGPKRLRRIARMCKDHGVRVQYSVFECVLEPKDWVVLRARLLSELDAESDSLRFYFLSEDVARKTEHHGTRVPLDVEGPLIL
>NZ_CP006003.1|WP_046716803.1|10352443_10353472_-|type-I-C-CRISPR-associated-endonuclease-Cas1
MTTALNTLFITVEGTRLNKEGERVVVTVQDVKKAEVPLRHLRSVVCLTRALMTPELLESCVEAGIHVSFFGMTGRFLARVEGLPGGNVLLRREQYRAADDGGRTLAIARAMVVGKVSNARQFVLHAKRDAAAEQSQSLEDAARKLAEHLRAVGRAEELEQVRGLEGIAARDYFEAFPSLLKGGARRFGFDGRNRRPPRDPLNALLSFGYALLAQDCSGALAGVGLDPAVGFLHEDRPGRLSLALDLMEELRAPVVDRLVFSLVNRGQLKPEDFKEEAAGAVMLRDEARKAFLVAYQAAKQVEVQHVFLGQQTSWGLVPHLQALLLARTLRGELDGYPPFAVR
>NZ_CP006003.1|WP_046716804.1|10353468_10354128_-|CRISPR-associated-protein-Cas4
MTSARETWVALSALQHLLFCERQAALIHVEQLWREDVRTATGRLLHERVDLPGHDARPGRRVERAVRLGCERLRLVGRADLVEYHPDATSPTGWRPYPVEVKRAKRKSPEADSVQLCAQALCLEEMHGVAVPEGALFHGAQHRRQVVRLDARLRARTEEAVARMHELLARGSVPVVARAPKCESCSLEPLCLPHVTAGQRLVSDHLRRMVDFVDPEEVS
>NZ_CP006003.1|WP_046716805.1|10354124_10355039_-|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MSELKNRHDFVLLFDVQDGNPNGDPDAGNLPRIDPETGDGLVTDVSLKRKVRNFILLTQEKKPGFDIFVKEKAVLNSTIAQAYKELGVDLNEKPKSDKDGKKRNTKGEAQGSEVDQGRAWMCKTFFDVRTFGAVMSTGPNAGQVRGPVQITFARSVTPIVSLEHSITRMAVATEAEAEKQGGDNRTMGRKNTVPYGLYRAHGFVSPHLAKQTGFGSGDLDLLFKAFLNMFELDRSAARGLMSMRKVIVFKHGSELGNAPAHALFDRVQVAPVNAEKPARSFKDYSVKVDTAKLPQGIEVMELAG
>NZ_CP006003.1|WP_046716806.1|10355076_10356825_-|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MMLTALNDFARERGLVDDPLYETKPVDFLIRLSAKGKLLGLEPTQDEKGRGKPLSIPRLPTRAVNIAAGFLADNTKYVLGHDPEAREGKADKGVPRLAAFVKLVKEAAADTKVPELRAVEKFLEDDAARAKVVEERAADEWTGSELFAFVVGDSLDPVHQLPEVRAWWEKRSAHAAAQGKVGLCLVTGTVGVVARTHPKLKNIPEAQGAGAALVSFNADAFESHGMEQGDNAPVSQQAALGYVLALNDLLRKSETRRFRQGIQLGDGSVLVFWTNSTAEQESQLLALLDPTEEDLRRFLEAPLIGLEPGALDAKRFYAVTLAGNSGRVAVRDWFQTSVGEVKESLRRYFADLRLGAVAQDKPTPIWRLLKAVEAPSGRGLTPDVATRMLGAALKGQPFPRQLLSAALDRLRLPPSDDKLEREQLRLRVALIKATLNRLPRSGTASLEVSVSLDKANTSQSYVLGRLFAVLERLQGAALGDINATIRDRYFGAASRNPVTVFPRLLQLSVHHASKAESGGWLEKKMGEVMALLPSQNPFPPVLTLENQGLFAVGYYHQREEFFTKRPQAEGKAAKDAPSKSDD
>NZ_CP006003.1|WP_082165494.1|10356821_10357478_-|type-I-C-CRISPR-associated-protein-Cas5
MWMKTSKRFRVRARGPVACFTRPEMKAERVSYEVMTPSAARGVLEAILWKPAIRWQVHEIAVLAPVRWTSFRRNEVNDRAVVGKFDYAADEDRAQRNTVALRDVDYAITASFSLVAGKAGPEDNVRKFEEMFERRLEKGQFFHAPYLGCREFAARVEPMVKDVRPVDLEVERRPLGLVFYDFEFGEATRPLFFEAYLDRGVLHVPGRDEVLKQNGGQP
>NZ_CP006003.1|WP_052771488.1|10357491_10359717_-|CRISPR-associated-helicase/endonuclease-Cas3
MSDDEPSRGVTAEPLAHVTADGRPHLLHEHLMEVGRLAALFAAREDMRVFCELAGRWHDLGKYRPHFQSRIRKENGFEAHLEVGNSSDKDHATAGALWALRMGRRLGPLAMAIAGHHGGLRDAEKFRGRVGDLEKHKLLEEALSAGVPEDLRALTPGLDFSWLEKLSKHRLEFWTRMLFSSLCDADFLDTEAFYDTSRVEARRVDVTLEQLARALRAFMDQKQSGAPDTPVNRVRREVLSAVLTRAPSLPGVFSLTVPTGGGKTLTSMAFALEHARARGLRRVIVAIPYTSIIEQSSGVYREAFGELGSAVIEHHSSVDPKKETALNRVASENWDAPVIVTTTVQLLESLFACRTSACRKLHNIAGSVIVLDEAQTLPPALLTTILDGLKTLVEDYGCSVVICTATQPALGMRPGFPEGFPFVQELVPPELNAFERLRRVTVRWPESREPMSYEALADAVAGERDVLAVVHRRDDARELCALVDARVGGGTTLHLSALMCPEHRSRVLADIQARKRRGVPVRLVATQLVEAGVDLDFAVVYRSLAGLDSLAQAAGRCNREGRLERPGELRVYEAKTQPPRGVPQAALAVTRALLAQDPSLDLFSPENFRRYFERLYANAARDGKGIQEARAALKYEEVSAKFQLVEDEWSAPVVVPFEGSEAVLDEVRRLGPSRERLRALQRFTVTVPRKLRDVWVERELAGVAAETVVFLGPEHRSAYDETFGLVPARVGILDPAFLIPG
>NZ_CP006003.1|WP_082165495.1|10359865_10361464_+|hypothetical-protein
MDRPSTKTVTTPDVPRVNCAREPGFTSTHPGPSGTRPPVHREPAHRQPWWPLLLIAAGAWLLRIAGFFHRGGAFGHPVDYDEGVYFSAAALLSQGLLPYRDYFFVHPPGIAVLLSPVAALSHGLGPALAFSVVRWLMPLAGALSTLLSGRIAQQRWGTRAGLVAALAYAVYPEAVSTERGPFLEPLLNLTCLTLAWVWLRPSTTQRQTLPRDVLAGALLATACAIKLTAGAWVLAVAWARGMSREGSRVARVILVAAGVGLLWLGPFFLLAPDAMLQGLLRFQLLRPPDGDSSLTSRLFSILVDGRLGLTLVTVIGVTVALARTRQQDAVTERLFSAAWLLTVATFLASKSYWSQYNAHLAPTTAVLTGLGADFIARKLHSARAQRIALAVTALLILTTLPGVLRAAKQKDRFLLPLGDTLRSTVPTDSTLCAFEPAWALAADRLPGLPRGTPAFVDPYGLMLNDALSAPTRFPNAEAAFQDAYSQRTALQLLPRCDVLLLLGRGEWQLSDTSEQWVCEHFTRDAELWRRNP
>NZ_CP006003.1|WP_046716810.1|10361620_10363129_+|aldehyde-dehydrogenase
MSQIELVGEPLLHLESSRLLAEARRVIPEAFDAQGRLLSPIAGAWVHPPAWFDARSPIDGQVFASLPLLSQAQAVQAVEKAAGEFLPWSARSLNARMHAVLDALDLLEDHRDLLVRVLAWDIGKTLPTACNDVDRCLTGLEWYLENIGPMLESRAPLGLVSNIASWNYPFSVLLLNVLVQTLAGNSVIAKIPTQGGGVSLTLAFALMRRARLPVSLAGGRGKDLSEALVGHPLIAGVAFIGGRANGAEVHRRLRDTNKRYALEMEGVNAYAITQFTDWDGLSRQIRAGFDFGKQRCTAYTRWVVEKSLVPRFVRAYVDAVSSLRVGHPLLSSHVDFGPLISASKVEELRALIDDARARGTEVLYEGTLTDDAFVPSQSRGSYIAPTLLFGVPRDSELYLREPFGPVDVLMSVDSEEELIREANVSQGALVASVATDDPQLAERLASQLQAFKVGINKLRSRGDREEPFGGKGGSWAGVFVGGTHLVHAFTEGPHALEGNWPD
>NZ_CP006003.1|WP_046716811.1|10363246_10363960_+|esterase
MNREYHRWHSERLHRDMELLLYGHSGEPVLLLPTSRGRFFQAEDFGLIGAIADRVQSGRYVIVCPDSVDDESWFNKSVHPHDRVARHQEWEQYLLNEVVPLLMSRSTGGRLTLAGCSFGGFHTYNVGLRHPHVFRRLISMGGKFETDEFLDGHQDNDVYFHSATQWLPNVHDNSQLAALQRVEMVLAVGEHDFCRPSNEHLSSLLWKKDIGNQLAIWQGGNHDWPVWREMIQQYLPW

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Crispr_ID: NZ_CP006003_31

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP006003_31

11010102-11010359

Orphan

Consensus_repeat	Method
CCGAGAGCGCCCACTCGCACGAGCGCGGCGAGGATCCACGCG	CRISPRCasFinder

3 spacers

The CRISPR arrays of NZ_CP006003_31

>merge|NZ_CP006003|31|11010102-11010359|CRISPRCasFinder
CCGAGAGCGTCCACTCGTACGAGCACACCGTGGATCCACAGGAGGAGGCGCCTCCCCTGGCGAAGCCCCCTTCCGAGAGCGCCCACTCGCACGAGCGCGGCGAGGATCCACGCGAGGATGCGCGTCCCTCATCGAGGACCCATCCCGAGAGCGCCCACTCGCACGAGCGCGGCGAGGATCCACGCGCGGGTGGACGCCCCCGCACGCGGGTCTCCTCCGAGGGCACCCACACGCACGAGCACGGCGTGGATCCACGCG

>NZ_CP006003|31|29|11010102-11010359|CRISPRCasFinder
CCGAGAGCGTCCACTCGTACGAGCACACCGTGGATCCACAGG	AGGAGGCGCCTCCCCTGGCGAAGCCCCCTT
CCGAGAGCGCCCACTCGCACGAGCGCGGCGAGGATCCACGCG	AGGATGCGCGTCCCTCATCGAGGACCCATC
CCGAGAGCGCCCACTCGCACGAGCGCGGCGAGGATCCACGCG	CGGGTGGACGCCCCCGCACGCGGGTCTCCT
CCGAGGGCACCCACACGCACGAGCACGGCGTGGATCCACGCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP006003.1\|WP_046717227.1\|11013032_11014376_+\|ergothioneine-biosynthesis-protein-EgtB	unknown	unknown	gnl\|CDD\|274581
NZ_CP006003.1\|WP_046717216.1\|10991663_10992059_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_082165678.1\|10994397_10998036_-\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP006003.1\|WP_082165542.1\|10998274_10999396_-\|DUF1152-domain-containing-protein	unknown	unknown	gnl\|CDD\|377680
NZ_CP006003.1\|WP_046717229.1\|11016554_11017088_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046717224.1\|11010746_11011127_-\|XRE-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP006003.1\|WP_046717221.1\|11000646_11003532_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|238362
NZ_CP006003.1\|WP_046717226.1\|11012246_11012438_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046717230.1\|11017091_11017541_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377376
NZ_CP006003.1\|WP_046717222.1\|11005323_11008170_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238362
NZ_CP006003.1\|WP_046717218.1\|10993953_10994388_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046718727.1\|11012450_11012828_-\|response-regulator	unknown	unknown	gnl\|CDD\|381140
NZ_CP006003.1\|WP_082165543.1\|11003588_11004764_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|222980
NZ_CP006003.1\|WP_046717220.1\|10999303_11000263_+\|alanine-dehydrogenase	unknown	unknown	gnl\|CDD\|180367
NZ_CP006003.1\|WP_046717225.1\|11011313_11011844_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046717223.1\|11008177_11008672_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046717228.1\|11015488_11015674_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046718729.1\|11015871_11016339_-\|CoA-binding-protein	unknown	unknown	gnl\|CDD\|224745
NZ_CP006003.1\|WP_046718728.1\|11014394_11015417_+\|L-histidine-N(alpha)-methyltransferase	unknown	unknown	gnl\|CDD\|378355
NZ_CP006003.1\|WP_046717217.1\|10992122_10993742_+\|sigma-54-dependent-Fis-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225114

Protein	Function_ID	Function_description	E-value
NZ_CP006003.1\|WP_082165678.1\|10994397_10998036_-\|serine/threonine-protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	3.74965e-85
NZ_CP006003.1\|WP_082165542.1\|10998274_10999396_-\|DUF1152-domain-containing-protein	gnl\|CDD\|377680	pfam06626, DUF1152, Protein of unknown function (DUF1152). This family consists of several hypothetical archaeal proteins of unknown function.	3.94678e-20
NZ_CP006003.1\|WP_046717224.1\|11010746_11011127_-\|XRE-family-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	1.15075e-11
NZ_CP006003.1\|WP_046717221.1\|11000646_11003532_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|238362	cd00688, ISOPREN_C2_like, This group contains class II terpene cyclases, protein prenyltransferases beta subunit, two broadly specific proteinase inhibitors alpha2-macroglobulin (alpha (2)-M) and pregnancy zone protein (PZP) and, the C3 C4 and C5 components of vertebrate complement. Class II terpene cyclases include squalene cyclase (SQCY) and 2,3-oxidosqualene cyclase (OSQCY), these integral membrane proteins catalyze a cationic cyclization cascade converting linear triterpenes to fused ring compounds. The protein prenyltransferases include protein farnesyltransferase (FTase) and geranylgeranyltransferase types I and II (GGTase-I and GGTase-II) which catalyze the carboxyl-terminal lipidation of Ras, Rab, and several other cellular signal transduction proteins, facilitating membrane associations and specific protein-protein interactions. Alpha (2)-M is a major carrier protein in serum and involved in the immobilization and entrapment of proteases. PZP is a pregnancy associated protein. Alpha (2)-M and PZP are known to bind to and, may modulate, the activity of placental protein-14 in T-cell growth and cytokine production thereby protecting the allogeneic fetus from attack by the maternal immune system.	1.66074e-15
NZ_CP006003.1\|WP_046717230.1\|11017091_11017541_-\|hypothetical-protein	gnl\|CDD\|377376	pfam04519, Bactofilin, Polymer-forming cytoskeletal. This is a family of bactofilins, a functionally diverse class of cytoskeletal, polymer-forming, proteins that is widely conserved among bacteria. In the example species C. crescentus, two bactofilins assemble into a membrane-associated laminar structure that shows cell-cycle-dependent polar localization and acts as a platform for the recruitment of a cell wall biosynthetic enzyme involved in polar morphogenesis. Bactofilins display distinct subcellular distributions and dynamics in different bacterial species, suggesting that they are versatile structural elements that have adopted a range of different cellular functions.	1.15342e-30
NZ_CP006003.1\|WP_046717222.1\|11005323_11008170_+\|hypothetical-protein	gnl\|CDD\|238362	cd00688, ISOPREN_C2_like, This group contains class II terpene cyclases, protein prenyltransferases beta subunit, two broadly specific proteinase inhibitors alpha2-macroglobulin (alpha (2)-M) and pregnancy zone protein (PZP) and, the C3 C4 and C5 components of vertebrate complement. Class II terpene cyclases include squalene cyclase (SQCY) and 2,3-oxidosqualene cyclase (OSQCY), these integral membrane proteins catalyze a cationic cyclization cascade converting linear triterpenes to fused ring compounds. The protein prenyltransferases include protein farnesyltransferase (FTase) and geranylgeranyltransferase types I and II (GGTase-I and GGTase-II) which catalyze the carboxyl-terminal lipidation of Ras, Rab, and several other cellular signal transduction proteins, facilitating membrane associations and specific protein-protein interactions. Alpha (2)-M is a major carrier protein in serum and involved in the immobilization and entrapment of proteases. PZP is a pregnancy associated protein. Alpha (2)-M and PZP are known to bind to and, may modulate, the activity of placental protein-14 in T-cell growth and cytokine production thereby protecting the allogeneic fetus from attack by the maternal immune system.	6.57214e-19
NZ_CP006003.1\|WP_046718727.1\|11012450_11012828_-\|response-regulator	gnl\|CDD\|381140	cd17625, REC_OmpR_DrrD-like, phosphoacceptor receiver (REC) domain of DrrD-like OmpR family response regulators. DrrD is a OmpR/PhoB homolog from Thermotoga maritima whose function is not yet known. This subfamily also includes Streptococcus agalactiae transcriptional regulatory protein DltR, part of the DltS/DltR two-component system (TCS), and Pseudomonas aeruginosa transcriptional activator protein PfeR, part of the PfeR/PfeS TCS, which activates expression of the ferric enterobactin receptor. The DltS/DltR TCS regulates the expression of the dlt operon, which comprises four genes (dltA, dltB, dltC, and dltD) that catalyze the incorporation of D-alanine residues into the lipoteichoic acids. Members of this subfamily belong to the OmpR/PhoB family, which comprises of two domains, an N-terminal receiver domain and a C-terminal DNA-binding winged helix-turn-helix effector domain. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	1.19248e-25
NZ_CP006003.1\|WP_082165543.1\|11003588_11004764_-\|hypothetical-protein	gnl\|CDD\|222980	PHA03095, PHA03095, ankyrin-like protein; Provisional.	1.76041e-21
NZ_CP006003.1\|WP_046717220.1\|10999303_11000263_+\|alanine-dehydrogenase	gnl\|CDD\|180367	PRK06046, PRK06046, alanine dehydrogenase; Validated.	2.88226e-138
NZ_CP006003.1\|WP_046717227.1\|11013032_11014376_+\|ergothioneine-biosynthesis-protein-EgtB	gnl\|CDD\|274581	TIGR03440, egtB_TIGR03440, ergothioneine biosynthesis protein EgtB. Members of this family include EgtB, and enzyme of the ergothioneine biosynthesis, as found in numerous Actinobacteria. Characterized homologs to this family include a formylglycine-generating enzyme that serves as a maturase for an aerobic sulfatase (cf. the radical SAM enzymes that serve as anaerobic sulfatase maturases). [Biosynthesis of cofactors, prosthetic groups, and carriers, Glutathione and analogs].	1.47382e-149
NZ_CP006003.1\|WP_046718729.1\|11015871_11016339_-\|CoA-binding-protein	gnl\|CDD\|224745	COG1832, COG1832, Predicted CoA-binding protein [General function prediction only].	2.34326e-44
NZ_CP006003.1\|WP_046718728.1\|11014394_11015417_+\|L-histidine-N(alpha)-methyltransferase	gnl\|CDD\|378355	pfam10017, Methyltransf_33, Histidine-specific methyltransferase, SAM-dependent. The mycobacterial members of this family are expressed from part of the ergothioneine biosynthetic gene cluster. EGTD is the histidine methyltransferase that transfers three methyl groups to the alpha-amino moiety of histidine, in the first stage of the production of this histidine betaine derivative that carries a thiol group attached to the C2 atom of an imidazole ring.	1.10169e-157
NZ_CP006003.1\|WP_046717217.1\|10992122_10993742_+\|sigma-54-dependent-Fis-family-transcriptional-regulator	gnl\|CDD\|225114	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms].	7.63229e-98

>NZ_CP006003.1|WP_046717223.1|11008177_11008672_-|hypothetical-protein
MRPSSLPCTVLLALVACGPSSSVDEGLGEVGGLDTSEAGITAFVREGRYREWLAEPAPRRSVRSHGDRVRVFFNDVLARSMAEGNRVHPVGSITVKELFESDGRTTRGHALDIKVAEGTGKDTWIFYEGFGPNYDDNYYGRGHDTCHGCHADQGTDYVATPLPR
>NZ_CP006003.1|WP_046717222.1|11005323_11008170_+|hypothetical-protein
MSIRALLLRSVSPSLWGLVLVTLLSATASRANERVEAAQRALDFVSADAVTWTKDQGCTSCHRHGAALFGLTQASANGFDLDTATTNGRTNRENMERLARDLLVGQDASGSWSLEGVHYRNAYTSYAAFGLAGYDAKVGNRHSEALARAADWAVSTQELSGRWVEDYPLRPVGASNMGVTARLMTALAQARVHADPARAARYQDALRRAAAYLREHLNDLAEGPFDDAQRYTYQVAWTAVGLKAAGPGEQGENTAALESVAARLLATRTLDDAPGWGSLDGEAPDETSTSFALYALCLAGRTPEQEPRVARALEWLTSRQAEDGGWGVGTSRHPDIPTTFATLALTCFPDKGDGVSVTVDDAASKPVAQALPHPQRVTYTLVVLHEGTRADTFTLEASGGLPGWTATLDRTTVTLAPGERTTLTLSVGTPVELAPSLTSEVRVTATSMSRPGVSGATQVTAYTNPPPPTEGLETTTTVLAGAQLTVGRDNPLSARVTSADGWRARGPGQGQVTFQVAGVTVGTDHDADGDGVYSVVWRPRGSWEVLGASEVRAVYSGVTLQPREANRLGSSGTRAVEILPSPDPLPSVTLCGLPDFMGETSVGVCGFVTALAPGATIESAAFILHGEQYPVVPEDSGGFVWTELPLRDGLNVIQLVATDTFGGRSSQQATVRVDAVAPGITVLYPAEGSMVGSLLTEVRVWVDDVSPVRVETNWVHVTEVPAGGGLVAHEVALNPGANEVLIRATDAAGHVTEHVLTFWVDAEAPWLVAGLPDGWLVGPQPGDTLDYELAVYSESATRVEVTPGGGTYEVPRGGGVFVARLPLVPGDNVFTMVATSETGLSTTLTRTVRYDNTPPRAQLLSPGPDEAVSGVVVLEARVTDDVSGVRSVAFTRDGSGIRAGTDWGDGVWTAELDTRELLDGPHTVEVWMEDAAGNFVIQTFPFVTLNRP
>NZ_CP006003.1|WP_082165543.1|11003588_11004764_-|hypothetical-protein
MSQALLDAISQEDVAAVKARVATADWSVRDGFGRAPLAVAASREGTKARDILTALLDAGADVNAAQGADSKEEEGWTALHQACVRGTSPETLGVVEVLLARGAKADGVSDKASVTPLELALRTHHLGIAEALLKAGANPDAVGPSGLAPLHLLVQLYREREGDRYKKGEREHMAGAAVKLLLAHGAKAGTKDRKGETALAKALLHRLPEEFVLALVAAGSPLDEWVDLGTPPEQVLVTPASMAVGLGQPPSVIKAMLETGLDTTKPVAPDQQNLLHYAAMKRFAALALVLELRPTQDVDARDASGATPLFLASWMGLVSSVQALLARKANPDIPDLDGNTPLHTAARNGLQEVVEVLLAAGANKSLRNLEAETPADRARQKGHEKLAALLG
>NZ_CP006003.1|WP_046717221.1|11000646_11003532_+|ABC-transporter-substrate-binding-protein
MPGTGPSPVRRPMFHPASSRRVARPSALVGLVTLLLAFLSTPASAQTQTNTQSTQRAVNFLSSDVATWVTGNGCAACHRVGASTFGLAAARANGYDMAAVVGNGQTNQYNLDFLGQRIATEQLANGSWIHEAASFRNEKTSYATFGLAGYDQSVSTQHSAKLVAAANWALLTQEASGRWPSDYTNFPVNHGSVPTTARIMVGIAQAKQRVDPARAAQYQTALDRAAAYLRTNLDNADPSATGNGMPYTFQVAWAVVGLKAAGPGPANANTVAIDTLANRLLTRASPGNPGWGDLHNAAANDMATGSAIYALCLAGREPATDPRVRSSIEWLKTRQSADGSWRTGSVTFDIPTTFAALGLSCYGDFSVHVTVVGQARKELVIGSQQGQQTTFTFNVKNHGYQADTYTLTTSGGLPAWASFPNPVSLFLPAGGEGTVTVTVNAPANLLPALTSEFTLTATSGGAPGVSGSARVNAYTPPLPPVTGLPTTTTIQTPAVNAHITIGTGNILSARVRDSNNNPVIGPTNGVVTFYVAGVPVGADADVNADGLFTFDWVPPSDAWTVTGAQDFRAVYSGIERQAPLSNLLGSTDSRTVIIDPFPHLTPSVTIGNPPAFTRETTLDIWGYATPRAPGAVITYAAFIINGATVIPLTPGNGGLIYTTITLQEGPNIIQLTARDSFGGVTTKQVNLTVDRVPPILTVQSPVNGAALGQLNVTVTSSVQDQTPVRVETQWVASSILEFGNGTVEHTVPMNYGDQVILVRATDSAFNVTEKLVFIWVDPGSPVVSTNPGDNQIFGAQPNHQLTYTVNVQSLSATTVRINGGAALSVARGGGAVQSTLTLSPGVNNLSIVTLSETGVSTTTTRRVNYDVQAPAATLLSPASGATVSGTITLRARVTDNFGPITHVGFSRDMSGIRPGTQQANGDWTATLDTTELLDGSHTVDVWMSDGVGNSTVQRFNFFVDN
>NZ_CP006003.1|WP_046717220.1|10999303_11000263_+|alanine-dehydrogenase
MSTLILSAKELRGLYTVELGLQAVEKAFRAHGRGESLMPPKVYLSLPQYDGDFRAMPAFLDGAAGVKWVNAHPQNPKKHGLPTVRALYILSDPDTASPLAILDGTWLTAWRTGCAGGVASKYLAKPKPRTLGLVGCGVQARVLIDAHRALFGELELLLADASDAAAKALQAEKGGRVVSLQEASGADIVCTSTPSRTPVVKREWVKPGAHINAMGADAPGKQELDARILTEGRVFIDDTEQALHSGEVNVPLHDGVLRAEQIAGTLGEVVAGKKPGRSGEEISIFDSTGLALQDVALARALYDVARAKGVGQTLDIVGG
>NZ_CP006003.1|WP_082165542.1|10998274_10999396_-|DUF1152-domain-containing-protein
MGPEGLLDGLESELDGVETAQLFRAEDEGGHGGAIYRRCRSIALWVLLQGPVKGASVVDLCTSPLFERLASARHVLIAGGGGGFDVFSGLPLYFRLRAQGKTVSLANMSFTRLEGVQGEWTAPGVVRVDATTAGPEHYFPEGWLARWFARQGEEVSIYCLDRGGVAPVREAYASLHARLGFDAVVLVDGGTDILMRGDEVGLGTPVEDISSLGAVHALPEMTKLVVCLGFGVDRHHGVCHAHFLESVAALSKDGGYLGVTALLESMPEVARYKDAVSFVCARMPRAPSIVSLSVVSALEGEYGDVHRTVRTQGSTLWINPLMSMYWAFDLSAVARRCLYLEALADTRTPWEMSLVIEKFREERPIRPWMDIPV
>NZ_CP006003.1|WP_082165678.1|10994397_10998036_-|serine/threonine-protein-kinase
MRGDALEPAASREGSLAAPGGPATSAHERSGAGGAPSAMSGREAAASVAPVLERRESLTPGVPGPGSVADTAEVILGRPDGVPAADDTPGLPDGSPSRGLDVSPAHATPDADAPAFPVPGWERYSPVRFLGQGGMGRVFLAWDARLHRHVALKFVRGDEPELARRFVSEARAQARVSHPRVCEVYEVGEVQGRVYIAMRYVDGLPLQSLVASLGVEQKARVLRDAAEGVHAAHRAGLIHRDIKPSNILVQRSTDGELSVYVMDFGLARDWKEGATATGTVLGTPHFMSPEQARGEVTRLDRRADVYGLGATLYALLTGSAPIPGGNGLEVLGNIATVEPRPPRALDADIPVDLEAITLKCLEKDRSARYGSARELAEDLSRFLDGAPVLARTGPGYRARKWLRRHRRSVALGTGALVVVSLALGQAVLARREVSQREALARRFTEQVERIEAQVRYTGIAPAHDTRADREALRQRMRELETAMREGGPMAEGPGHYALGRARLALGDDLLAHHHLDAAWRAGNTEPRVAYSMALVLSHLYQRARLDAERTRDETTRAKRLHDATRRFGETARDFLRRSEGAQVPSPEYVAALLAFLENRFDEALAKLEAPGSRLPWFHEAPLLRGDILVTRAASRWNTGQRDGALSDLEEGRRAYAHAADIGRSVPAVYLARARLEGWALLLALYGQGEVAPHYERGLAAVSQALLLSPDDAEAHELEAGFHRRLAEHHARRGGEVEPLLDKALASARRAMALSPPRLEGLHELALVHWQRARLRQEKGLDPRDSLREAVAAFDRATPETWDYDFHADHGQVFRVWADHEDGVGGDSLPYRQRAIDSHERAVALDAKRPEAWINLGTEYLARATNPRAPSPVEDLDKAAAALERARTLNPEHVVPWFYEGEVHLARATRQRDSGADAGPTLMRAREAYLRGVAINPKLPPLHNGLGTVGFEQAKDTWERGGDPEPSLREALKSFEQAIALAPAQGYGQNNVGEVHAWRARVRVLEGRSPEAEVKAARAALKDALEKVPDLAQPWMNLGTALLAEAEWRSTRGQPVAPVLTEAIQALRRALTLNPKQAQAWRVLGEALAIEALAKGDAESLTQVEHAFGQALTLEPTQPEHRLAFARFCLSWGQRPGASDSKRLERGRVLTEEVLAARPTWPRARALRAGLLLASAEKGSSHPEARELLSRALGDNPHLTHAWSAWLTLAKSR
>NZ_CP006003.1|WP_046717218.1|10993953_10994388_+|hypothetical-protein
MQQTDGGCAVDPCLAGDTGCLDLVVETGSVGKRFAPRPGVKGWTLCSGQGLEITSDLDKDLCIDLRDVRSAADGGVVALTKLHSKGSWSDPDLPSGEYCLSICDDKADHCSQGCKESDCVTDDQTIRGNLDVVTKVPEPTEESD
>NZ_CP006003.1|WP_046717217.1|10992122_10993742_+|sigma-54-dependent-Fis-family-transcriptional-regulator
MSPTLADVSTAAMPQRGGGPQGPRLVPALTLVSHPVPARVGERLRMDALVAGREVALSRNAPDFTRPGSVLGQPLNDPFISRKPLTLAPGSKPGSVRLTCTEGGERVVIAGSALEGTWELSEAELLQGVPLELGGRVVVLLHLMDAADDSATGDALGMVGESTGVRRLRRHIERVADLDVPVLIRGETGTGKERVAQAIHQRSRRREGRFLSVNLGAIPKELAAAELFGTQKGAYTGAAQSREGFFRAAHGGTLFLDEVGEAPPEVQVMLLRVLETGELYPVGGSTPVAVDVRLLAATDADLDERIRDGRFKAPLLHRLAGYEVHVPPLRERREDLGRLFFHFAREELASLGEAHRLDNEDAYAAPWLPAPLATRLVRFPWPGNIRQLRNLARQLVIGSRGEPTLQAEPRLEHELEVAAASTPGASVSSPEPVAEPRTPTTPRRKASQVTEQELLAALRENAWDLKATAEALGIPRPSLYDLIDKSPNLRTAGDLRSEEIAQAYEAHGGDLDAMARALEVSRKALGRRMKELGLTPRGE
>NZ_CP006003.1|WP_046717216.1|10991663_10992059_+|hypothetical-protein
MPEVSVEKPNQTKPGPESTESLTATIVNQTSGDLVLLKSATDEQWTVAPPSVIPAGQSGRFISPGDFSNPSAGYVVYQASAVNNATFTLNWTIPSVGPNSFSWPTSPGLVANESGSLSGWNISASWFVSAG
>NZ_CP006003.1|WP_046717224.1|11010746_11011127_-|XRE-family-transcriptional-regulator
MDTELASMLGAAARAARVRMGLTQADVAERIGMASEVYGRLERGHMLPSVQNLRRLCVVLNVPPHQLLGLGDDLAAPPPAKDKSGAKAREDDTPEMRRLMRNLRKLSPVQLKLMNLVASAMQQKKK
>NZ_CP006003.1|WP_046717225.1|11011313_11011844_-|hypothetical-protein
MAARRRYTPWSATNGLLFGVAAGVVLALAEVVMALASGDSPWRPVRMSASVVLGPRAFGEDYPLGTLVMLGVGMHLAVSAIVGVFYSFLDAMLPPDGRGRWEFQAAVGMLFGIGVWLVDFQFVARGYYPWFLDVPQFAQIVLHAVFLGLPLAMLFTAAERRRALMDIAESTPSSAP
>NZ_CP006003.1|WP_046717226.1|11012246_11012438_+|hypothetical-protein
MSAEAFGELQGALERLGDPSVREPLPEGGGAGRHRLSRHGLVLGYAWDDRSRTLTLLSLEREP
>NZ_CP006003.1|WP_046718727.1|11012450_11012828_-|response-regulator
MSSAAKHRTVLVVEDEDDIRAAIAEILEGEGYDVTVACNGREAMDELTDVRYVPSLILLDLMMPEMNGHEFLERRRSIARLRNVPVMVLTAVTTDIPPGANGLLRKPFSVEELLDAVRSMLPIAA
>NZ_CP006003.1|WP_046717227.1|11013032_11014376_+|ergothioneine-biosynthesis-protein-EgtB
MSRTMGRSTTAPTGDGTKPAWKARAWAQLEASRARVLRMLAGLPERVLMNQHSPLMSPLIWDVAHVANYEEQWLLRALGAPALTDPAFDTIYDAFRHPRSTRSTLPLLPPESAFAYAARVREAVRAHLSEHVPEDSDTPLLAGGYVFGMVAQHEQQHAETLAATLQLMTEVEYRLPPTPARPAPAPVSRHPVLIPGGVARLGSTHPWAFDNERPVHTREVHPFLLDAHPVTNGEYQAFVEDGGYDEPRWWHPKGWDFVRAQALAHPQFWLPQQGGRWLRRRFGQVEPLPPDEPVQHVCWYEADAYARWAGKRLPTESEWERAAHGACNVTREHPWGDAAPTAAHANLGGDTWGPLPVGSHPEGVSAEGVWGLLGDVWEWTSSDFQPYAGFGAFPYREYSEVFFGEDYKVLRGGAWASAPVAVRNGFRNWDYPIRRQIFAGFRCASEA
>NZ_CP006003.1|WP_046718728.1|11014394_11015417_+|L-histidine-N(alpha)-methyltransferase
MVEAVETTTLEEKPNGFPGVKVEVYVRPGDARRALKQEVLQGLCNTPKELSPKWLYDERGSQLFDDITRLPEYYPTRREREILLAHAGDVARLSGATTLIELGSGTSEKTRLLLDAMEEAGQLSRFVPFDVSESFLRRAAGTLAREYPGISVHAVVGDFEHHLNRLPQGGRRLVAFLGGTIGNLKPAQRARFLAELSSGLRPGDGLLLGTDLIKDRERLYAAYNDSAGVTAEFNRNVLNVLNRELGADFDPNGFEHFAPFDEHNSWVEMRLVSRREQTVWMQSLKRRVDFAAGEVLRTEVSCKFEQQRVEAELDAAGLGLAAWWTDEAGDFALSLALKRG
>NZ_CP006003.1|WP_046717228.1|11015488_11015674_-|hypothetical-protein
MSFSGMLPLHLATVDLSPVGERLFAASGLAVTVLAALWYAWTRPVAQPVPVRVSSRRNPRR
>NZ_CP006003.1|WP_046718729.1|11015871_11016339_-|CoA-binding-protein
MDWRANLIEDDAGVRDVLTRSRRVAVLGIRPESHAHKPAHSVPAYLQKHGYDIIPVPVHGETEPILGRPVYRAVADIPGQVDLVQVFRRPEDIDAHVSDLLAKKPHAVWFQLGIRNDAAAEQLARAGIRVVQDRCMKVELARLSQARELSGASPA
>NZ_CP006003.1|WP_046717229.1|11016554_11017088_-|hypothetical-protein
MRRARHIASGVVLALLSGCKGCDGGKDSPDASSPEQTSRSGVKVPLPEGWSAQVAPDDSFQAGPPGRPVLRVDLRRGKGEEMPSVEDLADRVRAESKNFEVSLDQEEEKDTYALLRVTLAPKQGDGGIGAAAPALFGARRVGNDLFLCATLPGATPEDVRLATEACREIEVQAAQPR
>NZ_CP006003.1|WP_046717230.1|11017091_11017541_-|hypothetical-protein
MALLGGKKDEAPSRPLFKREEESVSQRSGEVHTLLGKGSEFEGKLTFEGQVRIDGKFQGQIITKDVLVIGDGAKVQAEIQAGTVIINGQVEGNVKATQIIELKTPGRVKGNLETPSLSMDRGVIFEGSLKMENLGGNTTRPPPPGGEKK

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Crispr_ID: NZ_CP006003_32

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP006003_32

11022265-11022864

Orphan

Consensus_repeat	Method
GNAGCNNNTCCNCGTTCCACGTGGAACACGNNC	CRT
TCCACGTTCCACGTGGAACACG	PILER-CR

7 spacers

The CRISPR arrays of NZ_CP006003_32

>merge|NZ_CP006003|32|11022265-11022864|CRT,PILER-CR
GCATCTAGACCTCGTTCCACGTGGAACACGGTTCGACCCTTCATGGTTCGAACCCAGGTGACACCTGCGCGAACACCCGCTCGTGCTGCGCATCCACGTTCCACGTGGAACACGGACGGGCGTCACCTGCTTCTCGTGATGAGCGCGCACCCGCTACCAGGAGCCCATCCACGTTCCACGTGGAACACGGACAGGCATCCACCTGCTTCTCGTGATGAGCGCGCACGTACCTGCTTGCGGGAACTCATCCACGTTCCACGTGGAACACGAGCCAGCGTCCACCTGCTTCCCGCACCTCTTCACATCGATACGGGCGGCGCCTGTGCAGCCTCTCCACGTTCCACGTGGAACACGAACAAGGGATCCGACTGCTTCTCGTGATGAGCGCGCGTGCCCGCTGGCTTGCGCCCATCCTCGTTCCACGTGGAACACGAACCGGCGTCGGCCTGCTCATCGTAGTGAGCGCGCGTTGCCCACTGGCTTGAGCCCATCCTCGTTCCACGTGGAACGCGCACCAGCGTCAGCCTGCTTCCCGCGCCTCTTCACATCGGTACGGGCGGCACCTGTGGAGCTTCTCCACGTTCCACGTGGAACACGTGA

>NZ_CP006003|32|3|11022265-11022864|CRT
GCATCTAGACCTCGTTCCACGTGGAACACGGTT	CGACCCTTCATGGTTCGAACCCAGGTGACACCTGCGCGAACACCCGCTCGT
GCTGCGCATCCACGTTCCACGTGGAACACGGAC	GGGCGTCACCTGCTTCTCGTGATGAGCGCGCACCCGCTACCA
GGAGCCCATCCACGTTCCACGTGGAACACGGAC	AGGCATCCACCTGCTTCTCGTGATGAGCGCGCACGTACCTGCTTGCG
GGAACTCATCCACGTTCCACGTGGAACACGAGC	CAGCGTCCACCTGCTTCCCGCACCTCTTCACATCGATACGGGCGGCGCCTGT
GCAGCCTCTCCACGTTCCACGTGGAACACGAAC	AAGGGATCCGACTGCTTCTCGTGATGAGCGCGCGTGCCCGCTGGCT
TGCGCCCATCCTCGTTCCACGTGGAACACGAAC	CGGCGTCGGCCTGCTCATCGTAGTGAGCGCGCGTTGCCCACTGGCT
TGAGCCCATCCTCGTTCCACGTGGAACGCGCAC	CAGCGTCAGCCTGCTTCCCGCGCCTCTTCACATCGGTACGGGCGGCACCTGT
GGAGCTTCTCCACGTTCCACGTGGAACACGTGA

>NZ_CP006003|32|4|11022274-11022861|PILER-CR
CCTCGTTCCACGTGGAACACGG	TTCGACCCTTCATGGTTCGAACCCAGGTGACACCTGCGCGAACACCCGCTCGTGCTGCGCAT
CCACGTTCCACGTGGAACACGG	ACGGGCGTCACCTGCTTCTCGTGATGAGCGCGCACCCGCTACCAGGAGCCCAT
CCACGTTCCACGTGGAACACGG	ACAGGCATCCACCTGCTTCTCGTGATGAGCGCGCACGTACCTGCTTGCGGGAACTCAT
CCACGTTCCACGTGGAACACGA	GCCAGCGTCCACCTGCTTCCCGCACCTCTTCACATCGATACGGGCGGCGCCTGTGCAGCCTCT
CCACGTTCCACGTGGAACACGA	ACAAGGGATCCGACTGCTTCTCGTGATGAGCGCGCGTGCCCGCTGGCTTGCGCCCAT
CCTCGTTCCACGTGGAACACGA	ACCGGCGTCGGCCTGCTCATCGTAGTGAGCGCGCGTTGCCCACTGGCTTGAGCCCAT
CCTCGTTCCACGTGGAACGCGC	ACCAGCGTCAGCCTGCTTCCCGCGCCTCTTCACATCGGTACGGGCGGCACCTGTGGAGCTTCTCCA
CGTTCCACGTGGAACACG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP006003.1\|WP_082165679.1\|11032747_11032912_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235422
NZ_CP006003.1\|WP_046718731.1\|11025641_11026028_-\|VOC-family-protein	unknown	unknown	gnl\|CDD\|319898
NZ_CP006003.1\|WP_046717228.1\|11015488_11015674_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046717238.1\|11036127_11036916_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274008
NZ_CP006003.1\|WP_046717237.1\|11033033_11035925_-\|insulinase-family-protein	unknown	unknown	gnl\|CDD\|223685
NZ_CP006003.1\|WP_052771405.1\|11037668_11038049_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|277325
NZ_CP006003.1\|WP_046718730.1\|11018531_11019335_-\|ParA-family-protein	unknown	unknown	gnl\|CDD\|379293
NZ_CP006003.1\|WP_046717234.1\|11027669_11028323_-\|16S-rRNA-(guanine(527)-N(7))-methyltransferase-RsmG	unknown	unknown	gnl\|CDD\|234637
NZ_CP006003.1\|WP_046717230.1\|11017091_11017541_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377376
NZ_CP006003.1\|WP_046717232.1\|11019628_11019949_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046718727.1\|11012450_11012828_-\|response-regulator	unknown	unknown	gnl\|CDD\|381140
NZ_CP006003.1\|WP_046717229.1\|11016554_11017088_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006003.1\|WP_046717236.1\|11031088_11032309_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340878
NZ_CP006003.1\|WP_052771404.1\|11037002_11037491_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|277325
NZ_CP006003.1\|WP_046717227.1\|11013032_11014376_+\|ergothioneine-biosynthesis-protein-EgtB	unknown	unknown	gnl\|CDD\|274581
NZ_CP006003.1\|WP_046717239.1\|11037462_11037708_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|277325
NZ_CP006003.1\|WP_046717231.1\|11017544_11018438_-\|plasmid-partitioning-protein-ParB	unknown	unknown	gnl\|CDD\|275105
NZ_CP006003.1\|WP_046718729.1\|11015871_11016339_-\|CoA-binding-protein	unknown	unknown	gnl\|CDD\|224745
NZ_CP006003.1\|WP_046718728.1\|11014394_11015417_+\|L-histidine-N(alpha)-methyltransferase	unknown	unknown	gnl\|CDD\|378355
NZ_CP006003.1\|WP_046717235.1\|11028421_11030272_-\|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-enzyme-MnmG	unknown	unknown	gnl\|CDD\|235362

Protein	Function_ID	Function_description	E-value
NZ_CP006003.1\|WP_046717235.1\|11028421_11030272_-\|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-enzyme-MnmG	gnl\|CDD\|235362	PRK05192, PRK05192, tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG.	0
NZ_CP006003.1\|WP_082165679.1\|11032747_11032912_+\|hypothetical-protein	gnl\|CDD\|235422	PRK05342, clpX, ATP-dependent Clp protease ATP-binding subunit ClpX.	1.63033e-16
NZ_CP006003.1\|WP_046717234.1\|11027669_11028323_-\|16S-rRNA-(guanine(527)-N(7))-methyltransferase-RsmG	gnl\|CDD\|234637	PRK00107, gidB, 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG.	1.17283e-59
NZ_CP006003.1\|WP_046717238.1\|11036127_11036916_+\|hypothetical-protein	gnl\|CDD\|274008	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins].	3.13317e-08
NZ_CP006003.1\|WP_046717237.1\|11033033_11035925_-\|insulinase-family-protein	gnl\|CDD\|223685	COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only].	1.87748e-66
NZ_CP006003.1\|WP_046718730.1\|11018531_11019335_-\|ParA-family-protein	gnl\|CDD\|379293	pfam13614, AAA_31, AAA domain. This family includes a wide variety of AAA domains including some that have lost essential nucleotide binding residues in the P-loop.	1.98773e-90
NZ_CP006003.1\|WP_046717230.1\|11017091_11017541_-\|hypothetical-protein	gnl\|CDD\|377376	pfam04519, Bactofilin, Polymer-forming cytoskeletal. This is a family of bactofilins, a functionally diverse class of cytoskeletal, polymer-forming, proteins that is widely conserved among bacteria. In the example species C. crescentus, two bactofilins assemble into a membrane-associated laminar structure that shows cell-cycle-dependent polar localization and acts as a platform for the recruitment of a cell wall biosynthetic enzyme involved in polar morphogenesis. Bactofilins display distinct subcellular distributions and dynamics in different bacterial species, suggesting that they are versatile structural elements that have adopted a range of different cellular functions.	1.15342e-30
NZ_CP006003.1\|WP_052771405.1\|11037668_11038049_+\|hypothetical-protein	gnl\|CDD\|277325	cd07379, MPP_239FB, Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	1.03365e-21
NZ_CP006003.1\|WP_046718727.1\|11012450_11012828_-\|response-regulator	gnl\|CDD\|381140	cd17625, REC_OmpR_DrrD-like, phosphoacceptor receiver (REC) domain of DrrD-like OmpR family response regulators. DrrD is a OmpR/PhoB homolog from Thermotoga maritima whose function is not yet known. This subfamily also includes Streptococcus agalactiae transcriptional regulatory protein DltR, part of the DltS/DltR two-component system (TCS), and Pseudomonas aeruginosa transcriptional activator protein PfeR, part of the PfeR/PfeS TCS, which activates expression of the ferric enterobactin receptor. The DltS/DltR TCS regulates the expression of the dlt operon, which comprises four genes (dltA, dltB, dltC, and dltD) that catalyze the incorporation of D-alanine residues into the lipoteichoic acids. Members of this subfamily belong to the OmpR/PhoB family, which comprises of two domains, an N-terminal receiver domain and a C-terminal DNA-binding winged helix-turn-helix effector domain. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	1.19248e-25
NZ_CP006003.1\|WP_052771404.1\|11037002_11037491_+\|hypothetical-protein	gnl\|CDD\|277325	cd07379, MPP_239FB, Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	2.33295e-23
NZ_CP006003.1\|WP_046717227.1\|11013032_11014376_+\|ergothioneine-biosynthesis-protein-EgtB	gnl\|CDD\|274581	TIGR03440, egtB_TIGR03440, ergothioneine biosynthesis protein EgtB. Members of this family include EgtB, and enzyme of the ergothioneine biosynthesis, as found in numerous Actinobacteria. Characterized homologs to this family include a formylglycine-generating enzyme that serves as a maturase for an aerobic sulfatase (cf. the radical SAM enzymes that serve as anaerobic sulfatase maturases). [Biosynthesis of cofactors, prosthetic groups, and carriers, Glutathione and analogs].	1.47382e-149
NZ_CP006003.1\|WP_046717239.1\|11037462_11037708_+\|hypothetical-protein	gnl\|CDD\|277325	cd07379, MPP_239FB, Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	3.25064e-17
NZ_CP006003.1\|WP_046718729.1\|11015871_11016339_-\|CoA-binding-protein	gnl\|CDD\|224745	COG1832, COG1832, Predicted CoA-binding protein [General function prediction only].	2.34326e-44
NZ_CP006003.1\|WP_046717231.1\|11017544_11018438_-\|plasmid-partitioning-protein-ParB	gnl\|CDD\|275105	TIGR04285, parB-like_partition_protein, nucleoid occlusion protein. This model describes nucleoid occlusion protein, a close homolog to ParB chromosome partitioning proteins including Spo0J in Bacillus subtilis. Its gene often is located near the gene for the Spo0J ortholog. This protein bind a specific DNA sequence and blocks cytokinesis from happening until chromosome segregation is complete.	1.03973e-81
NZ_CP006003.1\|WP_046718731.1\|11025641_11026028_-\|VOC-family-protein	gnl\|CDD\|319898	cd06587, VOC, vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. Glyoxylase I catalyzes the glutathione-dependent inactivation of toxic methylglyoxal, requiring zinc or nickel ions for activity. The antibiotic resistance proteins in this family use a variety of mechanisms to block the function of antibiotics. Bleomycin resistance protein (BLMA) sequesters bleomycin's activity by directly binding to it. Whereas, three types of fosfomycin resistance proteins employ different mechanisms to render fosfomycin inactive by modifying the fosfomycin molecule. Although the proteins in this superfamily are functionally distinct, their structures are similar. The difference among the three dimensional structures of the three types of proteins in this superfamily is interesting from an evolutionary perspective. Both glyoxalase I and BLMA show domain swapping between subunits. However, there is no domain swapping for type 1 extradiol dioxygenases.	4.02997e-11
NZ_CP006003.1\|WP_046718728.1\|11014394_11015417_+\|L-histidine-N(alpha)-methyltransferase	gnl\|CDD\|378355	pfam10017, Methyltransf_33, Histidine-specific methyltransferase, SAM-dependent. The mycobacterial members of this family are expressed from part of the ergothioneine biosynthetic gene cluster. EGTD is the histidine methyltransferase that transfers three methyl groups to the alpha-amino moiety of histidine, in the first stage of the production of this histidine betaine derivative that carries a thiol group attached to the C2 atom of an imidazole ring.	1.10169e-157
NZ_CP006003.1\|WP_046717236.1\|11031088_11032309_+\|MFS-transporter	gnl\|CDD\|340878	cd17320, MFS_MdfA_MDR_like, Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This family is composed of bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as MdfA (also called chloramphenicol resistance pump Cmr), EmrD, MdtM, MdtL, bicyclomycin resistance protein (also called sulfonamide resistance protein), and the uncharacterized inner membrane transport protein YdhC. EmrD is a proton-dependent secondary transporter, first identified as an efflux pump for uncouplers of oxidative phosphorylation. It expels a range of drug molecules and amphipathic compounds across the inner membrane of E. coli. Similarly, MdfA is a secondary multidrug transporter that exports a broad spectrum of structurally and electrically dissimilar toxic compounds. These MDR transporters are drug/H+ antiporters (DHA) belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.79331e-98

>NZ_CP006003.1|WP_046717232.1|11019628_11019949_-|hypothetical-protein
MTPLDDEKLADISRRWKSALLIERWRSLPAASREEVLADMEDSSRGLRESDPKLSESYVAAMDALDVVSLDGTLHLWTQATDDVRHLLDEITRLRAELQRERTRLK
>NZ_CP006003.1|WP_046718730.1|11018531_11019335_-|ParA-family-protein
MGRIICISNQKGGVGKTTTAINLAASLASAERRTLLVDMDPQGNAGSGLGLKQDKLHGTIYDALLNGRPMKELFHPTELRYLQVVPATPDLTGAEVELVGQENREFRLRDALRPLAAEFDYIIIDCPPSLGLLTLNALSAADSVLIPLQCEYYALEGLSQLTHTIDLVKQGLNPDLKMEGILLTMFDARANIAHQVVEEVRGYFKDQVFQVVVPRNVRLSECPSFGKPIILYDIKSKGCESYLALGRELMKRDTPKSPRQAPRRRVA
>NZ_CP006003.1|WP_046717231.1|11017544_11018438_-|plasmid-partitioning-protein-ParB
MVKADTQKRALGRGLSALIPQAAPGGGKAAEQAALKAGVLKLPIESIHRDKDQPRHHFDEEKLKELTESIRVQGVIQPILVRKDQDGYRIIAGERRWRASQAAGLKEVPAIVKEVTEVQAFELALVENLQRADLNPIEEAEGYKRLTDEFKLTQEQISQRVGKERSTVANALRLLALPADVKGMVADGSLSMGHARALLGVPRLPELQNLAKQVAEKKLSVRDTERLVQQSRSNGKKDAGKTPPKQSPQVKSLVEELQRRLGTKVRLTERSPGKGTIEVDFFSYDDLDRLLKLLRKE
>NZ_CP006003.1|WP_046717230.1|11017091_11017541_-|hypothetical-protein
MALLGGKKDEAPSRPLFKREEESVSQRSGEVHTLLGKGSEFEGKLTFEGQVRIDGKFQGQIITKDVLVIGDGAKVQAEIQAGTVIINGQVEGNVKATQIIELKTPGRVKGNLETPSLSMDRGVIFEGSLKMENLGGNTTRPPPPGGEKK
>NZ_CP006003.1|WP_046717229.1|11016554_11017088_-|hypothetical-protein
MRRARHIASGVVLALLSGCKGCDGGKDSPDASSPEQTSRSGVKVPLPEGWSAQVAPDDSFQAGPPGRPVLRVDLRRGKGEEMPSVEDLADRVRAESKNFEVSLDQEEEKDTYALLRVTLAPKQGDGGIGAAAPALFGARRVGNDLFLCATLPGATPEDVRLATEACREIEVQAAQPR
>NZ_CP006003.1|WP_046718729.1|11015871_11016339_-|CoA-binding-protein
MDWRANLIEDDAGVRDVLTRSRRVAVLGIRPESHAHKPAHSVPAYLQKHGYDIIPVPVHGETEPILGRPVYRAVADIPGQVDLVQVFRRPEDIDAHVSDLLAKKPHAVWFQLGIRNDAAAEQLARAGIRVVQDRCMKVELARLSQARELSGASPA
>NZ_CP006003.1|WP_046717228.1|11015488_11015674_-|hypothetical-protein
MSFSGMLPLHLATVDLSPVGERLFAASGLAVTVLAALWYAWTRPVAQPVPVRVSSRRNPRR
>NZ_CP006003.1|WP_046718728.1|11014394_11015417_+|L-histidine-N(alpha)-methyltransferase
MVEAVETTTLEEKPNGFPGVKVEVYVRPGDARRALKQEVLQGLCNTPKELSPKWLYDERGSQLFDDITRLPEYYPTRREREILLAHAGDVARLSGATTLIELGSGTSEKTRLLLDAMEEAGQLSRFVPFDVSESFLRRAAGTLAREYPGISVHAVVGDFEHHLNRLPQGGRRLVAFLGGTIGNLKPAQRARFLAELSSGLRPGDGLLLGTDLIKDRERLYAAYNDSAGVTAEFNRNVLNVLNRELGADFDPNGFEHFAPFDEHNSWVEMRLVSRREQTVWMQSLKRRVDFAAGEVLRTEVSCKFEQQRVEAELDAAGLGLAAWWTDEAGDFALSLALKRG
>NZ_CP006003.1|WP_046717227.1|11013032_11014376_+|ergothioneine-biosynthesis-protein-EgtB
MSRTMGRSTTAPTGDGTKPAWKARAWAQLEASRARVLRMLAGLPERVLMNQHSPLMSPLIWDVAHVANYEEQWLLRALGAPALTDPAFDTIYDAFRHPRSTRSTLPLLPPESAFAYAARVREAVRAHLSEHVPEDSDTPLLAGGYVFGMVAQHEQQHAETLAATLQLMTEVEYRLPPTPARPAPAPVSRHPVLIPGGVARLGSTHPWAFDNERPVHTREVHPFLLDAHPVTNGEYQAFVEDGGYDEPRWWHPKGWDFVRAQALAHPQFWLPQQGGRWLRRRFGQVEPLPPDEPVQHVCWYEADAYARWAGKRLPTESEWERAAHGACNVTREHPWGDAAPTAAHANLGGDTWGPLPVGSHPEGVSAEGVWGLLGDVWEWTSSDFQPYAGFGAFPYREYSEVFFGEDYKVLRGGAWASAPVAVRNGFRNWDYPIRRQIFAGFRCASEA
>NZ_CP006003.1|WP_046718727.1|11012450_11012828_-|response-regulator
MSSAAKHRTVLVVEDEDDIRAAIAEILEGEGYDVTVACNGREAMDELTDVRYVPSLILLDLMMPEMNGHEFLERRRSIARLRNVPVMVLTAVTTDIPPGANGLLRKPFSVEELLDAVRSMLPIAA
>NZ_CP006003.1|WP_046718731.1|11025641_11026028_-|VOC-family-protein
MGKMRVARPTRSLAPVVRFYREGLGFELRGGFEDHAGFDGVMLGCPGLPYHLEFTVERGHEAPRAPSKEHLLVFYVPQRDEWKARVKRMVQAGFEPVRSHNPYWDVNGMTFEDPDGYRVVLYQGEWTR
>NZ_CP006003.1|WP_046717234.1|11027669_11028323_-|16S-rRNA-(guanine(527)-N(7))-methyltransferase-RsmG
MDNTRFDDLLASGCQALGVSVGPDVGPRLQQLMAELLKWNAKVNLTAITAPEEVLEKHFLDSLAVLPEVTGAASLLDLGAGAGFPGLPLKIALPSLGVTLVDTVGKKVAFIKAAAASLRLQGVRGLHARAEGQPETEGIPLAELLIARAFMDLPDWLSLAPAYVAPGGRVVAMLGKAQTDAELAARAEERELRVVSARAYRLPFSGAERQVAVFTRR
>NZ_CP006003.1|WP_046717235.1|11028421_11030272_-|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-enzyme-MnmG
MGLRYDVIVVGLGHAGSEAALACARLGLSTLAVTLKRERSAVMSCNPAVGGTAKGHLVRELDALGGQMGRVADLAGTHFKILNASKGPAVQATRILCDREQYAALMQDVLFHAPNLTVREGEVSALVTEGGRVTGVRMGDGADVAASAVVLTTGTFLQALMHVGEKKEVGGRLGDDAAKGLSDSLRGLGFTLGRFKTGTPARLSRASIDWDRVEPQPGDFPPRPFSWRTRVEQASGVPFPRQREVTCGMTQTTLETHRVLRDNLHRSPLYQGEIVGRGPRYCPSLEDKVVRFADRQRHQVFLEPEGPDSPLVYPAGLSTSLPADVQLDFLRTIPGLEKVEVVRFGYAVEYDYSPPTQLHPTLETKSVAGLYFAGQLNGTSGYEEAAFQGLWAGLNAALRVKGEPALVLGRDEAHGAVLVDDLVTKGVDEPFRMFTSRSEHRLKLREGNADLRLARHGHRVGLLPREALERAEARQRAVTEEVTRLKRSGLAARLKRPEVTYLSLGEGRADWPSVGEEVGEEVEVEVKYEGYIAQAARAAARESEATDRWRIPEGFRFGEVRGLSKEAAEKLASHRPSTVGQARRIPGLTPTAVSLLLVALKRVSGPAGGGDGHPLE
>NZ_CP006003.1|WP_046717236.1|11031088_11032309_+|MFS-transporter
MNPLTKKSPPSGTLSMELLLGTLTAFAPLSIDMYLPALPRIAEDLHSSASVIQLTLASCFAGLALGQLFTGPLIDRFGRTRPLYVGLAVYVLGSLGCALAPSATALVAMRFFQALGGAVALVAPRAVVRDLWSGADAARTMSRLMLVVGVAPVLAPLLGGLVLQYTSWRAIFVLLAGIGVVALVATVRVLPETAPAHSGPRSVRSQLGALLKDADFVGPALAGGFAYAGMFAYIAGSPFVFITLHGVPEQSFGWFFGANAVGLVAMAQLNRKLLGVIPLHRMLRLALTWCWLTALVVFAVTWSGAGGLWGLAAALFLFVPTIGLVGPNSVAIALERHAAHAGLASALLGALQFAAAATASWAVSALDDGTARPMGGVLAAAATLAWLCAFLRHRSGAAKPEPTVAA
>NZ_CP006003.1|WP_082165679.1|11032747_11032912_+|hypothetical-protein
MHGFLPGIHLQCSFCEKYQREVRHLIVGNDVRICDECIGLCNGIIKKEQEGASK
>NZ_CP006003.1|WP_046717237.1|11033033_11035925_-|insulinase-family-protein
MADGVCRVRSAVHFLKTREDRMKRRTPLSLLAPLMLVASQPVWAQAPAPSPSAAKAPAPAAKATTPATKAGSLSPVTSVEGITEYRLPNGLRVLLFPDPTKPNVTVNVTYFVGSKHEGYGETGMAHLLEHLLFKGTPTTKNVPQALTERGARPNGTTWLDRTNYFETLPATDENLQWALSFEADRMVNSFIAKKDLDSEMTVVRNEFESGENDPGSILQERVLSAAYIWHSYGKSTIGARSDLENVPIDRLQAFYRKYYRPDNALLVVAGRFDEGKALGYIQDTFGKLKKPAEPVPATYTAEPTQDGEREVTLRRVGDNPMLASVYHVPEGAHPDFAAIDVLTLAMGHNPSGRLYKSLVEGKKVAKVSAYNLQFRDPGVIGFSAELREGQPLGPAREALIKNVEEAARKPFTEEEVTRAKTTLLKIMELTLNNSERAAIGLSEWAATGDWRLMFLHRDRIEAVKPEDVTRVATTYLKSSNRTMGSFVPTAKPDRSEMPAPVELAKVLEGYKGRAAVTQGEAFDPSPANVEARVQRGELPGGMKYALLSKKTRGEMVNASLSFHWGTEATLRGKSDAAAYTGRMLMRGTQKRTRSQLQDELDKLKARVSVDGGLSGASANIECPRASLPKVLELVAEVLRQPAFDAKEFALLKQERLADLEAQRSEPETQGSIAFWRTLSGHYPKGHPYYVPTLDERIAGAKNTTLEQARAFHKQFYGGSNAELAVVGDFEPKELTGVASKLFGGWKSPAKYERVPEVFNDVGAKALVLETPDKANAYYYAGQTLQLRDQDEDWPALMLGNFVLGGGFLNSRLATRIRQKDGLSYGVASSLNPGDIDAVGTFITYAIYAPENAGRLELAMREEVTSALQKGYSAEELEKARAGLLEYRQAGRAQDGGLARRLASYLYLGRTLAFDAEVEQKLAKLKPEDVRQAMARHVDWTKVTQVKSGDFVGAEKKVKAPVAP
>NZ_CP006003.1|WP_046717238.1|11036127_11036916_+|hypothetical-protein
MARNDGGGLGPMYQREMEELKERLRKAHEESLAAIAKLSQHMDRTRVNLDALDRSHADFRQSFQAVQREYGELRELVHEHHVVIGETRQEVSGLKGDVGGLQQDVKEIRVDVHELKQDVALLKQKVEALEVKVHALERKMEVVHARLDGIDRRLDAIDSRLGILETGCQAMEVKLQRSDRLFEEMNERMDLFSRDLRVLRAGFEESVETLAKLAATMGINASEMRRGLFHVNEKVARLSVEQDTTDKRLQAHESILTRLLKN
>NZ_CP006003.1|WP_052771404.1|11037002_11037491_+|hypothetical-protein
MKLVLISDTHRRHEELEVPVCDVLIHAGDFSRRGKQEELESFLGWLSRCPAREKVFVAGNHDFICERDPQLTRRLAHEAGVHYLDDEEVLVRGLRVWGSPVTPRFGGMAFNRERGADIRTHWDLIPEGLDVLVTHGPPKCLGDRTFLGGARGPRVRRAHPRG
>NZ_CP006003.1|WP_046717239.1|11037462_11037708_+|hypothetical-protein
MCDVLIHAGDFSRRGKQEELESFLGWLSRCPAREKVFVAGNHDFICERDPQLTRRLAHERGCTTSTMRRCSSAACASGAHR
>NZ_CP006003.1|WP_052771405.1|11037668_11038049_+|hypothetical-protein
MLVRGLRVWGSPVTPRFGGMAFNRERGADIRTHWDLIPEGLDVLVTHGPPKCLGDRTFLGAHVGCEDLLTRVKQVRPRLHVYGHIHESPGEQSLPDVPTRFLNVSNCHLHPFGIRPPVEVELDARS

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP006003_30	30.59\|10351727\|36\|NZ_CP006003\|CRISPRCasFinder,CRT,PILER-CR	10351727-10351762	36	NZ_CP006003.1	6199320-6199355	0	1.0

1. spacer 30.59|10351727|36|NZ_CP006003|CRISPRCasFinder,CRT,PILER-CR matches to position: 6199320-6199355, mismatch: 0, identity: 1.0

gcctcgtcgcctacgtccagccctcggagccgcgac	CRISPR spacer
gcctcgtcgcctacgtccagccctcggagccgcgac	Protospacer
************************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP006003_29	29.1\|9908736\|21\|NZ_CP006003\|CRISPRCasFinder	9908736-9908756	21	NZ_CP033582	Streptomyces sp. ADI95-16 plasmid pADI95-16a, complete sequence	354640-354660	1	0.952
NZ_CP006003_7	7.1\|1588752\|25\|NZ_CP006003\|CRISPRCasFinder	1588752-1588776	25	NZ_CP027859	Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence	1326107-1326131	2	0.92
NZ_CP006003_7	7.1\|1588752\|25\|NZ_CP006003\|CRISPRCasFinder	1588752-1588776	25	NZ_CP016560	Streptomyces clavuligerus strain F613-1 plasmid pSCL4, complete sequence	585093-585117	2	0.92
NZ_CP006003_7	7.1\|1588752\|25\|NZ_CP006003\|CRISPRCasFinder	1588752-1588776	25	NZ_CP032054	Streptomyces clavuligerus strain F1D-5 plasmid pSCL1, complete sequence	123045-123069	2	0.92
NZ_CP006003_12	12.2\|2955828\|26\|NZ_CP006003\|CRT	2955828-2955853	26	NZ_CP014519	Sinomonas atrocyanea strain KCTC 3377 plasmid pSA01, complete sequence	35304-35329	2	0.923
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NC_014309	Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome	373165-373187	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	CP023013	Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence	342490-342512	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP021653	Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence	235899-235921	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP049790	Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence	363008-363030	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP022766	Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence	345758-345780	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP021763	Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence	408143-408165	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP021767	Ralstonia solanacearum strain RS 489 plasmid unnamed, complete sequence	235993-236015	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP015116	Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence	499159-499181	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP016555	Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence	2073504-2073526	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP012940	Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence	260226-260248	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP012688	Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence	235908-235930	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP052069	Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence	347848-347870	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP016915	Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence	957819-957841	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP016905	Ralstonia solanacearum strain KACC 10709 plasmid unnamed1	1336945-1336967	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP022769	Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence	347017-347039	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP022773	Ralstonia solanacearum strain T42 plasmid unnamed, complete sequence	357310-357332	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP022783	Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence	343788-343810	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP022791	Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence	236690-236712	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP022795	Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence	342875-342897	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP052071	Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence	359736-359758	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP009763	Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence	340049-340071	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	CP023015	Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence	344020-344042	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP022779	Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence	347035-347057	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP052075	Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence	359736-359758	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP052085	Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence	361468-361490	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP052095	Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence	345809-345831	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP052105	Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence	359735-359757	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP021765	Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence	408190-408212	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP052077	Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence	338669-338691	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP052087	Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence	361468-361490	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP052097	Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence	345809-345831	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP052115	Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence	359736-359758	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP052127	Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence	361468-361490	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP052079	Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence	338672-338694	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP052089	Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence	361472-361494	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP052093	Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence	345809-345831	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP052101	Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence	345809-345831	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP052099	Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence	345809-345831	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP052107	Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence	359736-359758	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP052117	Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence	359736-359758	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP052125	Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence	338672-338694	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP022793	Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence	357293-357315	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP022785	Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence	357255-357277	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP022787	Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence	350636-350658	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP022756	Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence	348765-348787	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP052129	Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence	344320-344342	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP052121	Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence	359736-359758	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP052123	Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence	338672-338694	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP052131	Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence	361468-361490	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP052073	Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence	359730-359752	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP052081	Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence	338672-338694	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP052083	Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence	338672-338694	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP052109	Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence	359736-359758	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP052091	Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence	345812-345834	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP052103	Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence	359736-359758	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP052119	Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence	359736-359758	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP016613	Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence	282189-282211	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP021449	Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence	1717684-1717706	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP021449	Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence	1727349-1727371	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP026091	Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence	1760386-1760408	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP049794	Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence	288649-288671	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP049788	Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence	1594910-1594932	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP026093	Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence	1760522-1760544	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP012944	Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence	1640849-1640871	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP049792	Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence	70125-70147	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP025986	Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence	2178754-2178776	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP015851	Ralstonia solanacearum strain YC40-M plasmid, complete sequence	44703-44725	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NC_017575	Ralstonia solanacearum Po82 megaplasmid, complete sequence	1760048-1760070	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP022482	Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence	735930-735952	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP026308	Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence	1759994-1760016	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	CP047139	Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence	1752128-1752150	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	CP047137	Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence	1690908-1690930	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP022781	Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence	1750855-1750877	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	CP011998	Ralstonia solanacearum strain YC45 plasmid, complete sequence	417183-417205	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP052111	Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence	1732890-1732912	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP052113	Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence	1732890-1732912	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NC_007766	Rhizobium etli CFN 42 plasmid p42f, complete sequence	636037-636059	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP006990	Rhizobium sp. IE4771 plasmid pRetIE4771d, complete sequence	722718-722740	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP021029	Rhizobium sp. TAL182 plasmid pRetTAL182e, complete sequence	508847-508869	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP020911	Rhizobium etli strain NXC12 plasmid pRetNXC12e, complete sequence	972019-972041	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP013600	Rhizobium sp. N741 plasmid pRspN741e, complete sequence	746411-746433	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NC_021911	Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1f, complete sequence	1076180-1076202	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP013504	Rhizobium esperanzae strain N561 plasmid pRspN561d, complete sequence	746441-746463	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP013510	Rhizobium sp. N1341 plasmid pRspN1341e, complete sequence	744852-744874	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP013521	Rhizobium sp. N113 plasmid pRspN113d, complete sequence	749099-749121	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP021127	Rhizobium sp. Kim5 plasmid pRetKim5c, complete sequence	649794-649816	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP013494	Rhizobium sp. N6212 plasmid pRspN6212d, complete sequence	736000-736022	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP013515	Rhizobium sp. N1314 plasmid pRspN1314d, complete sequence	482317-482339	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP054028	Rhizobium sp. JKLM19E plasmid pPR19E01, complete sequence	1425810-1425832	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP013594	Rhizobium sp. N871 plasmid pRspN871d, complete sequence	746441-746463	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	CP007644	Rhizobium etli bv. phaseoli str. IE4803 plasmid pRetIE4803c, complete sequence	705261-705283	2	0.913
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP013605	Rhizobium sp. N731 plasmid pRspN731d, complete sequence	482311-482333	2	0.913
NZ_CP006003_7	7.1\|1588752\|25\|NZ_CP006003\|CRISPRCasFinder	1588752-1588776	25	NZ_CP029341	Streptomyces sp. SM17 plasmid pSM17C, complete sequence	21390-21414	3	0.88
NZ_CP006003_12	12.1\|2955771\|26\|NZ_CP006003\|CRT	2955771-2955796	26	MN096367	Microbacterium phage Nucci, complete genome	12426-12451	3	0.885
NZ_CP006003_12	12.2\|2955828\|26\|NZ_CP006003\|CRT	2955828-2955853	26	NZ_CP007794	Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence	102506-102531	3	0.885
NZ_CP006003_12	12.2\|2955828\|26\|NZ_CP006003\|CRT	2955828-2955853	26	CP040467	Streptomyces albidoflavus strain UYFA156 plasmid unnamed, complete sequence	195105-195130	3	0.885
NZ_CP006003_12	12.2\|2955828\|26\|NZ_CP006003\|CRT	2955828-2955853	26	NZ_CP021653	Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence	193442-193467	3	0.885
NZ_CP006003_12	12.2\|2955828\|26\|NZ_CP006003\|CRT	2955828-2955853	26	NZ_CP021767	Ralstonia solanacearum strain RS 489 plasmid unnamed, complete sequence	193535-193560	3	0.885
NZ_CP006003_12	12.2\|2955828\|26\|NZ_CP006003\|CRT	2955828-2955853	26	NZ_CP012944	Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence	31176-31201	3	0.885
NZ_CP006003_12	12.2\|2955828\|26\|NZ_CP006003\|CRT	2955828-2955853	26	NZ_CP012688	Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence	193451-193476	3	0.885
NZ_CP006003_12	12.2\|2955828\|26\|NZ_CP006003\|CRT	2955828-2955853	26	MT855965	Microcystis phage vB_MaeS-yong1, complete genome	10301-10326	3	0.885
NZ_CP006003_12	12.2\|2955828\|26\|NZ_CP006003\|CRT	2955828-2955853	26	CP047139	Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence	1792766-1792791	3	0.885
NZ_CP006003_12	12.2\|2955828\|26\|NZ_CP006003\|CRT	2955828-2955853	26	CP047137	Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence	1730832-1730857	3	0.885
NZ_CP006003_12	12.6\|2956053\|26\|NZ_CP006003\|CRT	2956053-2956078	26	MT855965	Microcystis phage vB_MaeS-yong1, complete genome	10301-10326	3	0.885
NZ_CP006003_12	12.6\|2956053\|26\|NZ_CP006003\|CRT	2956053-2956078	26	DQ115846	Cyanobacteria phage AS-1 contig_39 genomic sequence	380-405	3	0.885
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP013069	Pannonibacter phragmitetus strain 31801 plasmid p.p-1, complete sequence	313751-313773	3	0.87
NZ_CP006003_12	12.7\|2956110\|23\|NZ_CP006003\|CRT	2956110-2956132	23	NZ_CP032313	Pannonibacter phragmitetus BB plasmid p.BB_1, complete sequence	183695-183717	3	0.87
NZ_CP006003_7	7.1\|1588752\|25\|NZ_CP006003\|CRISPRCasFinder	1588752-1588776	25	MN693655	Marine virus AFVG_250M932, complete genome	27783-27807	4	0.84
NZ_CP006003_7	7.1\|1588752\|25\|NZ_CP006003\|CRISPRCasFinder	1588752-1588776	25	MN694160	Marine virus AFVG_250M933, complete genome	27785-27809	4	0.84
NZ_CP006003_7	7.1\|1588752\|25\|NZ_CP006003\|CRISPRCasFinder	1588752-1588776	25	NZ_CP007794	Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence	1451456-1451480	4	0.84
NZ_CP006003_7	7.1\|1588752\|25\|NZ_CP006003\|CRISPRCasFinder	1588752-1588776	25	CP052389	Klebsiella pneumoniae strain C17KP0052 plasmid pC17KP0052-1	185485-185509	4	0.84
NZ_CP006003_7	7.1\|1588752\|25\|NZ_CP006003\|CRISPRCasFinder	1588752-1588776	25	NZ_CP025552	Streptomyces rimosus strain WT5260 plasmid unnamed, complete sequence	216458-216482	4	0.84
NZ_CP006003_12	12.1\|2955771\|26\|NZ_CP006003\|CRT	2955771-2955796	26	MN284901	Microbacterium phage YuuY, complete genome	12430-12455	4	0.846
NZ_CP006003_12	12.2\|2955828\|26\|NZ_CP006003\|CRT	2955828-2955853	26	NZ_CP021653	Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence	655212-655237	4	0.846
NZ_CP006003_12	12.2\|2955828\|26\|NZ_CP006003\|CRT	2955828-2955853	26	NZ_CP021767	Ralstonia solanacearum strain RS 489 plasmid unnamed, complete sequence	655231-655256	4	0.846
NZ_CP006003_12	12.2\|2955828\|26\|NZ_CP006003\|CRT	2955828-2955853	26	NZ_CP012944	Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence	297462-297487	4	0.846
NZ_CP006003_12	12.2\|2955828\|26\|NZ_CP006003\|CRT	2955828-2955853	26	NZ_CP012688	Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence	655221-655246	4	0.846
NZ_CP006003_12	12.2\|2955828\|26\|NZ_CP006003\|CRT	2955828-2955853	26	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	3151370-3151395	4	0.846
NZ_CP006003_12	12.2\|2955828\|26\|NZ_CP006003\|CRT	2955828-2955853	26	CP047139	Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence	674800-674825	4	0.846
NZ_CP006003_12	12.2\|2955828\|26\|NZ_CP006003\|CRT	2955828-2955853	26	NC_014309	Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome	1877413-1877438	4	0.846
NZ_CP006003_12	12.2\|2955828\|26\|NZ_CP006003\|CRT	2955828-2955853	26	NZ_CP026091	Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence	639520-639545	4	0.846
NZ_CP006003_12	12.2\|2955828\|26\|NZ_CP006003\|CRT	2955828-2955853	26	NZ_CP027859	Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence	149211-149236	4	0.846
NZ_CP006003_12	12.2\|2955828\|26\|NZ_CP006003\|CRT	2955828-2955853	26	NZ_LR134451	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 9, complete sequence	334508-334533	4	0.846
NZ_CP006003_12	12.2\|2955828\|26\|NZ_CP006003\|CRT	2955828-2955853	26	NZ_CP026093	Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence	639555-639580	4	0.846
NZ_CP006003_12	12.2\|2955828\|26\|NZ_CP006003\|CRT	2955828-2955853	26	NZ_CP012940	Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence	525581-525606	4	0.846
NZ_CP006003_12	12.2\|2955828\|26\|NZ_CP006003\|CRT	2955828-2955853	26	NZ_CP041653	Streptomyces sp. RLB1-9 plasmid pRLB1-9.1, complete sequence	105287-105312	4	0.846
NZ_CP006003_12	12.2\|2955828\|26\|NZ_CP006003\|CRT	2955828-2955853	26	NC_017575	Ralstonia solanacearum Po82 megaplasmid, complete sequence	639370-639395	4	0.846
NZ_CP006003_12	12.2\|2955828\|26\|NZ_CP006003\|CRT	2955828-2955853	26	NZ_CP026308	Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence	639348-639373	4	0.846
NZ_CP006003_12	12.2\|2955828\|26\|NZ_CP006003\|CRT	2955828-2955853	26	NZ_CP051295	Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence	519485-519510	4	0.846
NZ_CP006003_12	12.6\|2956053\|26\|NZ_CP006003\|CRT	2956053-2956078	26	NZ_CP032340	Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence	746645-746670	4	0.846
NZ_CP006003_12	12.6\|2956053\|26\|NZ_CP006003\|CRT	2956053-2956078	26	NZ_CP022367	Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence	842770-842795	4	0.846
NZ_CP006003_12	12.6\|2956053\|26\|NZ_CP006003\|CRT	2956053-2956078	26	NZ_CP007794	Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence	1433227-1433252	4	0.846
NZ_CP006003_12	12.6\|2956053\|26\|NZ_CP006003\|CRT	2956053-2956078	26	NC_008826	Methylibium petroleiphilum PM1 plasmid RPME01, complete sequence	535742-535767	4	0.846
NZ_CP006003_12	12.6\|2956053\|26\|NZ_CP006003\|CRT	2956053-2956078	26	NZ_CP040819	Paraoceanicella profunda strain D4M1 plasmid pD4M1A, complete sequence	97066-97091	4	0.846
NZ_CP006003_12	12.6\|2956053\|26\|NZ_CP006003\|CRT	2956053-2956078	26	CP040467	Streptomyces albidoflavus strain UYFA156 plasmid unnamed, complete sequence	195105-195130	4	0.846
NZ_CP006003_12	12.6\|2956053\|26\|NZ_CP006003\|CRT	2956053-2956078	26	NZ_CP012915	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence	1385745-1385770	4	0.846
NZ_CP006003_16	16.1\|3877979\|27\|NZ_CP006003\|CRISPRCasFinder	3877979-3878005	27	NZ_CP021083	Deinococcus ficus strain CC-FR2-10 plasmid pDFI2, complete sequence	238149-238175	4	0.852
NZ_CP006003_2	2.1\|244182\|30\|NZ_CP006003\|CRISPRCasFinder	244182-244211	30	MN304815	Burkholderiales phage 68_11, complete genome	33685-33714	5	0.833
NZ_CP006003_12	12.1\|2955771\|26\|NZ_CP006003\|CRT	2955771-2955796	26	NZ_CP030764	Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed4, complete sequence	4270-4295	5	0.808
NZ_CP006003_12	12.1\|2955771\|26\|NZ_CP006003\|CRT	2955771-2955796	26	NZ_CP020568	Kitasatospora aureofaciens strain DM-1 plasmid unnamed1, complete sequence	151827-151852	5	0.808
NZ_CP006003_12	12.2\|2955828\|26\|NZ_CP006003\|CRT	2955828-2955853	26	KR011063	Tsukamurella phage TIN3, complete genome	46764-46789	5	0.808
NZ_CP006003_12	12.2\|2955828\|26\|NZ_CP006003\|CRT	2955828-2955853	26	KR011064	Tsukamurella phage TIN4, complete genome	46763-46788	5	0.808
NZ_CP006003_12	12.2\|2955828\|26\|NZ_CP006003\|CRT	2955828-2955853	26	NZ_LR536452	Methylocella tundrae isolate MTUNDRAET4 annotated genome plasmid 3	49511-49536	5	0.808
NZ_CP006003_12	12.2\|2955828\|26\|NZ_CP006003\|CRT	2955828-2955853	26	NZ_CP016284	Cryobacterium arcticum strain PAMC 27867 plasmid pP27867_2, complete sequence	19142-19167	5	0.808
NZ_CP006003_12	12.2\|2955828\|26\|NZ_CP006003\|CRT	2955828-2955853	26	NZ_CP048424	Rhizobium daejeonense strain KACC 13094 plasmid unnamed1, complete sequence	239753-239778	5	0.808
NZ_CP006003_12	12.2\|2955828\|26\|NZ_CP006003\|CRT	2955828-2955853	26	NZ_CP032695	Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence	2094249-2094274	5	0.808
NZ_CP006003_12	12.3\|2955885\|26\|NZ_CP006003\|CRT	2955885-2955910	26	NC_048046	Caulobacter phage CcrPW, complete genome	249175-249200	5	0.808
NZ_CP006003_12	12.6\|2956053\|26\|NZ_CP006003\|CRT	2956053-2956078	26	NZ_CP022762	Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence	356215-356240	5	0.808
NZ_CP006003_12	12.6\|2956053\|26\|NZ_CP006003\|CRT	2956053-2956078	26	NZ_LR134466	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 24, complete sequence	61825-61850	5	0.808
NZ_CP006003_12	12.6\|2956053\|26\|NZ_CP006003\|CRT	2956053-2956078	26	NZ_CP029830	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed1, complete sequence	788097-788122	5	0.808
NZ_CP006003_12	12.6\|2956053\|26\|NZ_CP006003\|CRT	2956053-2956078	26	NZ_CP014703	Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence	356215-356240	5	0.808
NZ_CP006003_12	12.6\|2956053\|26\|NZ_CP006003\|CRT	2956053-2956078	26	NZ_CP022771	Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence	356227-356252	5	0.808
NZ_CP006003_12	12.6\|2956053\|26\|NZ_CP006003\|CRT	2956053-2956078	26	NZ_CP022777	Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence	356248-356273	5	0.808
NZ_CP006003_12	12.6\|2956053\|26\|NZ_CP006003\|CRT	2956053-2956078	26	NZ_CP022799	Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence	356214-356239	5	0.808
NZ_CP006003_12	12.6\|2956053\|26\|NZ_CP006003\|CRT	2956053-2956078	26	NZ_CP032695	Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence	2094249-2094274	5	0.808
NZ_CP006003_12	12.6\|2956053\|26\|NZ_CP006003\|CRT	2956053-2956078	26	NZ_CP021811	Sinorhizobium meliloti strain Rm41 plasmid accessoryA, complete sequence	139728-139753	5	0.808
NZ_CP006003_12	12.6\|2956053\|26\|NZ_CP006003\|CRT	2956053-2956078	26	NC_018682	Sinorhizobium meliloti Rm41 plasmid pRM41A, complete sequence	50726-50751	5	0.808
NZ_CP006003_16	16.1\|3877979\|27\|NZ_CP006003\|CRISPRCasFinder	3877979-3878005	27	NZ_CP006368	Aureimonas sp. AU20 plasmid pAU20a, complete sequence	346973-346999	5	0.815
NZ_CP006003_30	30.14\|10348550\|32\|NZ_CP006003\|CRISPRCasFinder,CRT	10348550-10348581	32	NC_048768	Gordonia phage Chelms, complete genome	6717-6748	5	0.844
NZ_CP006003_30	30.14\|10348550\|32\|NZ_CP006003\|CRISPRCasFinder,CRT	10348550-10348581	32	NZ_CP031193	Humibacter sp. BT305 plasmid unnamed1	4965-4996	5	0.844
NZ_CP006003_12	12.2\|2955828\|26\|NZ_CP006003\|CRT	2955828-2955853	26	NZ_CP013415	Burkholderia ubonensis strain MSMB2035 plasmid pMSMB2035, complete sequence	86143-86168	6	0.769
NZ_CP006003_12	12.4\|2955942\|29\|NZ_CP006003\|CRT	2955942-2955970	29	NZ_CP010870	Confluentimicrobium sp. EMB200-NS6 strain EMBL200_NS6 plasmid pNS6001, complete sequence	84153-84181	6	0.793
NZ_CP006003_12	12.6\|2956053\|26\|NZ_CP006003\|CRT	2956053-2956078	26	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	5693470-5693495	6	0.769
NZ_CP006003_12	12.6\|2956053\|26\|NZ_CP006003\|CRT	2956053-2956078	26	NZ_CP029357	Azospirillum sp. CFH 70021 plasmid unnamed2	175169-175194	6	0.769
NZ_CP006003_12	12.6\|2956053\|26\|NZ_CP006003\|CRT	2956053-2956078	26	NC_011881	Pseudarthrobacter chlorophenolicus A6 plasmid pACHL02, complete sequence	50633-50658	6	0.769
NZ_CP006003_15	15.1\|3422619\|31\|NZ_CP006003\|CRISPRCasFinder	3422619-3422649	31	NC_013855	Azospirillum sp. B510 plasmid pAB510a, complete sequence	1071284-1071314	6	0.806
NZ_CP006003_15	15.1\|3422619\|31\|NZ_CP006003\|CRISPRCasFinder	3422619-3422649	31	NZ_CP020040	Streptomyces sp. 3211 isolate 3 plasmid p3211-1, complete sequence	322451-322481	6	0.806
NZ_CP006003_15	15.1\|3422619\|31\|NZ_CP006003\|CRISPRCasFinder	3422619-3422649	31	NZ_CP020372	Candidatus Thiodictyon syntrophicum strain Cad16T plasmid pTs485, complete sequence	334275-334305	6	0.806
NZ_CP006003_15	15.1\|3422619\|31\|NZ_CP006003\|CRISPRCasFinder	3422619-3422649	31	NZ_CP013513	Rhizobium sp. N1314 plasmid pRspN1314b, complete sequence	306005-306035	6	0.806
NZ_CP006003_15	15.1\|3422619\|31\|NZ_CP006003\|CRISPRCasFinder	3422619-3422649	31	NZ_CP054621	Azospirillum oryzae strain KACC 14407 plasmid unnamed6, complete sequence	819817-819847	6	0.806
NZ_CP006003_15	15.1\|3422619\|31\|NZ_CP006003\|CRISPRCasFinder	3422619-3422649	31	NZ_CP013603	Rhizobium sp. N731 plasmid pRspN731b, complete sequence	306005-306035	6	0.806
NZ_CP006003_16	16.1\|3877979\|27\|NZ_CP006003\|CRISPRCasFinder	3877979-3878005	27	CP021183	Sphingomonas wittichii DC-6 plasmid pDC02, complete sequence	92697-92723	6	0.778
NZ_CP006003_16	16.1\|3877979\|27\|NZ_CP006003\|CRISPRCasFinder	3877979-3878005	27	NZ_CP030074	Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence	506218-506244	6	0.778
NZ_CP006003_30	30.3\|10347767\|36\|NZ_CP006003\|CRISPRCasFinder,CRT	10347767-10347802	36	NZ_CP007129	Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence	1082603-1082638	6	0.833
NZ_CP006003_30	30.14\|10348550\|32\|NZ_CP006003\|CRISPRCasFinder,CRT	10348550-10348581	32	MT986029	Gordonia phage Linetti, complete genome	6870-6901	6	0.812
NZ_CP006003_30	30.75\|10348550\|33\|NZ_CP006003\|PILER-CR	10348550-10348582	33	NC_048768	Gordonia phage Chelms, complete genome	6716-6748	6	0.818
NZ_CP006003_31	31.3\|11010288\|30\|NZ_CP006003\|CRISPRCasFinder	11010288-11010317	30	NC_013858	Azospirillum sp. B510 plasmid pAB510d, complete sequence	109381-109410	6	0.8
NZ_CP006003_13	13.1\|3422193\|34\|NZ_CP006003\|CRISPRCasFinder	3422193-3422226	34	NZ_CP043960	Streptomyces tendae strain 139 plasmid unnamed1, complete sequence	32388-32421	7	0.794
NZ_CP006003_15	15.1\|3422619\|31\|NZ_CP006003\|CRISPRCasFinder	3422619-3422649	31	NZ_CP018096	Chelatococcus daeguensis strain TAD1 plasmid pTAD1, complete sequence	225442-225472	7	0.774
NZ_CP006003_15	15.1\|3422619\|31\|NZ_CP006003\|CRISPRCasFinder	3422619-3422649	31	NZ_CP024587	Roseomonas sp. FDAARGOS_362 plasmid unnamed3, complete sequence	124097-124127	7	0.774
NZ_CP006003_30	30.6\|10347984\|32\|NZ_CP006003\|CRISPRCasFinder,CRT	10347984-10348015	32	NC_047851	Brevibacterium phage LuckyBarnes, complete genome	9365-9396	7	0.781
NZ_CP006003_30	30.9\|10348195\|34\|NZ_CP006003\|CRISPRCasFinder,CRT	10348195-10348228	34	NZ_CP031752	Rhodobacter sphaeroides strain EBL0706 plasmid p.A, complete sequence	84404-84437	7	0.794
NZ_CP006003_30	30.9\|10348195\|34\|NZ_CP006003\|CRISPRCasFinder,CRT	10348195-10348228	34	NZ_CP031752	Rhodobacter sphaeroides strain EBL0706 plasmid p.A, complete sequence	105540-105573	7	0.794
NZ_CP006003_30	30.9\|10348195\|34\|NZ_CP006003\|CRISPRCasFinder,CRT	10348195-10348228	34	NZ_CP034782	Pseudomonas sp. MPC6 plasmid pMPC6-328K, complete sequence	320756-320789	7	0.794
NZ_CP006003_30	30.14\|10348550\|32\|NZ_CP006003\|CRISPRCasFinder,CRT	10348550-10348581	32	NZ_CP032326	Azospirillum brasilense strain MTCC4035 plasmid p5, complete sequence	75547-75578	7	0.781
NZ_CP006003_30	30.14\|10348550\|32\|NZ_CP006003\|CRISPRCasFinder,CRT	10348550-10348581	32	NZ_CP012748	Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence	1448291-1448322	7	0.781
NZ_CP006003_30	30.14\|10348550\|32\|NZ_CP006003\|CRISPRCasFinder,CRT	10348550-10348581	32	NZ_CP020900	Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRphaBra5d, complete sequence	77468-77499	7	0.781
NZ_CP006003_30	30.14\|10348550\|32\|NZ_CP006003\|CRISPRCasFinder,CRT	10348550-10348581	32	NZ_CP013526	Rhizobium phaseoli strain R744 plasmid pRphaR744d, complete sequence	330406-330437	7	0.781
NZ_CP006003_30	30.14\|10348550\|32\|NZ_CP006003\|CRISPRCasFinder,CRT	10348550-10348581	32	NZ_CP013556	Rhizobium phaseoli strain N931 plasmid pRphaN931d, complete sequence	343170-343201	7	0.781
NZ_CP006003_30	30.14\|10348550\|32\|NZ_CP006003\|CRISPRCasFinder,CRT	10348550-10348581	32	NZ_CP013562	Rhizobium phaseoli strain N841 plasmid pRphaN841e, complete sequence	375721-375752	7	0.781
NZ_CP006003_30	30.14\|10348550\|32\|NZ_CP006003\|CRISPRCasFinder,CRT	10348550-10348581	32	NZ_CP013531	Rhizobium phaseoli strain R723 plasmid pRphaR723d, complete sequence	349802-349833	7	0.781
NZ_CP006003_30	30.14\|10348550\|32\|NZ_CP006003\|CRISPRCasFinder,CRT	10348550-10348581	32	NZ_CP013536	Rhizobium phaseoli strain R650 plasmid pRphaR650d, complete sequence	571180-571211	7	0.781
NZ_CP006003_30	30.14\|10348550\|32\|NZ_CP006003\|CRISPRCasFinder,CRT	10348550-10348581	32	NZ_CP013567	Rhizobium phaseoli strain N831 plasmid pRphaN831d, complete sequence	343170-343201	7	0.781
NZ_CP006003_30	30.14\|10348550\|32\|NZ_CP006003\|CRISPRCasFinder,CRT	10348550-10348581	32	NZ_CP013584	Rhizobium phaseoli strain N261 plasmid pRphaN261d, complete sequence	349802-349833	7	0.781
NZ_CP006003_30	30.14\|10348550\|32\|NZ_CP006003\|CRISPRCasFinder,CRT	10348550-10348581	32	NC_010997	Rhizobium etli CIAT 652 plasmid pC, complete sequence	329912-329943	7	0.781
NZ_CP006003_30	30.14\|10348550\|32\|NZ_CP006003\|CRISPRCasFinder,CRT	10348550-10348581	32	NZ_CP043439	Cupriavidus campinensis strain MJ1 plasmid unnamed2, complete sequence	100159-100190	7	0.781
NZ_CP006003_30	30.14\|10348550\|32\|NZ_CP006003\|CRISPRCasFinder,CRT	10348550-10348581	32	MK524490	Mycobacterium phage Donny, complete genome	51331-51362	7	0.781
NZ_CP006003_30	30.14\|10348550\|32\|NZ_CP006003\|CRISPRCasFinder,CRT	10348550-10348581	32	MT889381	Mycobacterium phage Suigeneris, complete genome	51304-51335	7	0.781
NZ_CP006003_30	30.15\|10348619\|33\|NZ_CP006003\|CRISPRCasFinder,CRT	10348619-10348651	33	NZ_AP022333	Methylosinus sp. C49 isolate Methylosinus sp. C49 plasmid pMSC49a, complete sequence	278785-278817	7	0.788
NZ_CP006003_30	30.21\|10349043\|34\|NZ_CP006003\|CRISPRCasFinder,CRT	10349043-10349076	34	NZ_CP054613	Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence	2618552-2618585	7	0.794
NZ_CP006003_30	30.35\|10350033\|31\|NZ_CP006003\|CRISPRCasFinder,CRT	10350033-10350063	31	NZ_CP015203	Rhodococcus sp. 008 plasmid pR8L1, complete sequence	465679-465709	7	0.774
NZ_CP006003_30	30.44\|10350669\|33\|NZ_CP006003\|CRISPRCasFinder,CRT,PILER-CR	10350669-10350701	33	NC_013855	Azospirillum sp. B510 plasmid pAB510a, complete sequence	1257454-1257486	7	0.788
NZ_CP006003_30	30.70\|10348195\|35\|NZ_CP006003\|PILER-CR	10348195-10348229	35	NZ_CP031752	Rhodobacter sphaeroides strain EBL0706 plasmid p.A, complete sequence	84403-84437	7	0.8
NZ_CP006003_30	30.70\|10348195\|35\|NZ_CP006003\|PILER-CR	10348195-10348229	35	NZ_CP031752	Rhodobacter sphaeroides strain EBL0706 plasmid p.A, complete sequence	105539-105573	7	0.8
NZ_CP006003_30	30.70\|10348195\|35\|NZ_CP006003\|PILER-CR	10348195-10348229	35	NZ_CP034782	Pseudomonas sp. MPC6 plasmid pMPC6-328K, complete sequence	320755-320789	7	0.8
NZ_CP006003_30	30.75\|10348550\|33\|NZ_CP006003\|PILER-CR	10348550-10348582	33	NZ_CP013526	Rhizobium phaseoli strain R744 plasmid pRphaR744d, complete sequence	330405-330437	7	0.788
NZ_CP006003_30	30.75\|10348550\|33\|NZ_CP006003\|PILER-CR	10348550-10348582	33	NZ_CP013556	Rhizobium phaseoli strain N931 plasmid pRphaN931d, complete sequence	343169-343201	7	0.788
NZ_CP006003_30	30.75\|10348550\|33\|NZ_CP006003\|PILER-CR	10348550-10348582	33	NZ_CP012748	Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence	1448290-1448322	7	0.788
NZ_CP006003_30	30.75\|10348550\|33\|NZ_CP006003\|PILER-CR	10348550-10348582	33	NZ_CP013562	Rhizobium phaseoli strain N841 plasmid pRphaN841e, complete sequence	375720-375752	7	0.788
NZ_CP006003_30	30.75\|10348550\|33\|NZ_CP006003\|PILER-CR	10348550-10348582	33	NZ_CP013531	Rhizobium phaseoli strain R723 plasmid pRphaR723d, complete sequence	349801-349833	7	0.788
NZ_CP006003_30	30.75\|10348550\|33\|NZ_CP006003\|PILER-CR	10348550-10348582	33	NZ_CP013567	Rhizobium phaseoli strain N831 plasmid pRphaN831d, complete sequence	343169-343201	7	0.788
NZ_CP006003_30	30.75\|10348550\|33\|NZ_CP006003\|PILER-CR	10348550-10348582	33	NZ_CP013584	Rhizobium phaseoli strain N261 plasmid pRphaN261d, complete sequence	349801-349833	7	0.788
NZ_CP006003_30	30.75\|10348550\|33\|NZ_CP006003\|PILER-CR	10348550-10348582	33	NC_010997	Rhizobium etli CIAT 652 plasmid pC, complete sequence	329911-329943	7	0.788
NZ_CP006003_30	30.75\|10348550\|33\|NZ_CP006003\|PILER-CR	10348550-10348582	33	MT986029	Gordonia phage Linetti, complete genome	6869-6901	7	0.788
NZ_CP006003_30	30.75\|10348550\|33\|NZ_CP006003\|PILER-CR	10348550-10348582	33	NZ_CP020900	Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRphaBra5d, complete sequence	77468-77500	7	0.788
NZ_CP006003_30	30.75\|10348550\|33\|NZ_CP006003\|PILER-CR	10348550-10348582	33	NZ_CP013536	Rhizobium phaseoli strain R650 plasmid pRphaR650d, complete sequence	571180-571212	7	0.788
NZ_CP006003_2	2.1\|244182\|30\|NZ_CP006003\|CRISPRCasFinder	244182-244211	30	NZ_CP020399	Burkholderia multivorans strain FDAARGOS_246 plasmid unnamed, complete sequence	93407-93436	8	0.733
NZ_CP006003_12	12.4\|2955942\|29\|NZ_CP006003\|CRT	2955942-2955970	29	NC_021289	Burkholderia insecticola plasmid p1, complete sequence	1221150-1221178	8	0.724
NZ_CP006003_12	12.4\|2955942\|29\|NZ_CP006003\|CRT	2955942-2955970	29	NZ_CP018078	Sulfitobacter sp. AM1-D1 plasmid unnamed2, complete sequence	54922-54950	8	0.724
NZ_CP006003_15	15.1\|3422619\|31\|NZ_CP006003\|CRISPRCasFinder	3422619-3422649	31	NZ_CP054023	Rhizobium sp. JKLM12A2 plasmid pPR12A202, complete sequence	256045-256075	8	0.742
NZ_CP006003_15	15.1\|3422619\|31\|NZ_CP006003\|CRISPRCasFinder	3422619-3422649	31	NZ_CP021032	Rhizobium sp. NXC14 plasmid pRspNXC14b, complete sequence	759287-759317	8	0.742
NZ_CP006003_15	15.1\|3422619\|31\|NZ_CP006003\|CRISPRCasFinder	3422619-3422649	31	NZ_CP015867	Streptomyces parvulus strain 2297 plasmid pSPA1, complete sequence	122319-122349	8	0.742
NZ_CP006003_15	15.1\|3422619\|31\|NZ_CP006003\|CRISPRCasFinder	3422619-3422649	31	NZ_CP020899	Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRphaBra5c, complete sequence	426036-426066	8	0.742
NZ_CP006003_15	15.1\|3422619\|31\|NZ_CP006003\|CRISPRCasFinder	3422619-3422649	31	NC_007765	Rhizobium etli CFN 42 plasmid p42e, complete sequence	491599-491629	8	0.742
NZ_CP006003_15	15.1\|3422619\|31\|NZ_CP006003\|CRISPRCasFinder	3422619-3422649	31	NZ_CP021028	Rhizobium sp. TAL182 plasmid pRetTAL182d, complete sequence	492478-492508	8	0.742
NZ_CP006003_15	15.1\|3422619\|31\|NZ_CP006003\|CRISPRCasFinder	3422619-3422649	31	NZ_CP020909	Rhizobium etli strain NXC12 plasmid pRetNXC12c, complete sequence	491402-491432	8	0.742
NZ_CP006003_15	15.1\|3422619\|31\|NZ_CP006003\|CRISPRCasFinder	3422619-3422649	31	NZ_CP020951	Rhizobium sp. CIAT894 plasmid pRheCIAT894d, complete sequence	546542-546572	8	0.742
NZ_CP006003_15	15.1\|3422619\|31\|NZ_CP006003\|CRISPRCasFinder	3422619-3422649	31	NZ_CP018230	Rhizobium leguminosarum strain Vaf-108 plasmid unnamed2, complete sequence	414893-414923	8	0.742
NZ_CP006003_15	15.1\|3422619\|31\|NZ_CP006003\|CRISPRCasFinder	3422619-3422649	31	NZ_CP025508	Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvB, complete sequence	587138-587168	8	0.742
NZ_CP006003_15	15.1\|3422619\|31\|NZ_CP006003\|CRISPRCasFinder	3422619-3422649	31	NZ_CP013529	Rhizobium phaseoli strain R723 plasmid pRphaR723b, complete sequence	414113-414143	8	0.742
NZ_CP006003_15	15.1\|3422619\|31\|NZ_CP006003\|CRISPRCasFinder	3422619-3422649	31	NC_011366	Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG202, complete sequence	457272-457302	8	0.742
NZ_CP006003_15	15.1\|3422619\|31\|NZ_CP006003\|CRISPRCasFinder	3422619-3422649	31	NC_021908	Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1d, complete sequence	498320-498350	8	0.742
NZ_CP006003_15	15.1\|3422619\|31\|NZ_CP006003\|CRISPRCasFinder	3422619-3422649	31	NZ_CP013582	Rhizobium phaseoli strain N261 plasmid pRphaN261b, complete sequence	414113-414143	8	0.742
NZ_CP006003_15	15.1\|3422619\|31\|NZ_CP006003\|CRISPRCasFinder	3422619-3422649	31	NZ_CP013516	Rhizobium sp. N1314 plasmid pRspN1314e, complete sequence	492953-492983	8	0.742
NZ_CP006003_15	15.1\|3422619\|31\|NZ_CP006003\|CRISPRCasFinder	3422619-3422649	31	NZ_CP054029	Rhizobium sp. JKLM19E plasmid pPR19E02, complete sequence	333232-333262	8	0.742
NZ_CP006003_15	15.1\|3422619\|31\|NZ_CP006003\|CRISPRCasFinder	3422619-3422649	31	NZ_CP033582	Streptomyces sp. ADI95-16 plasmid pADI95-16a, complete sequence	626151-626181	8	0.742
NZ_CP006003_15	15.1\|3422619\|31\|NZ_CP006003\|CRISPRCasFinder	3422619-3422649	31	NZ_CP023068	Ensifer sojae CCBAU 05684 plasmid pSJ05684b, complete sequence	1615757-1615787	8	0.742
NZ_CP006003_15	15.1\|3422619\|31\|NZ_CP006003\|CRISPRCasFinder	3422619-3422649	31	NZ_CP022667	Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR2, complete sequence	50436-50466	8	0.742
NZ_CP006003_15	15.1\|3422619\|31\|NZ_CP006003\|CRISPRCasFinder	3422619-3422649	31	NZ_CP021082	Deinococcus ficus strain CC-FR2-10 plasmid pDFI1, complete sequence	364461-364491	8	0.742
NZ_CP006003_15	15.1\|3422619\|31\|NZ_CP006003\|CRISPRCasFinder	3422619-3422649	31	NZ_CP035001	Rhizobium acidisoli strain FH23 plasmid pRapFH23c, complete sequence	630543-630573	8	0.742
NZ_CP006003_15	15.1\|3422619\|31\|NZ_CP006003\|CRISPRCasFinder	3422619-3422649	31	NZ_CP050087	Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b5, complete sequence	585922-585952	8	0.742
NZ_CP006003_18	18.1\|4356366\|35\|NZ_CP006003\|CRISPRCasFinder	4356366-4356400	35	MT771346	Gordonia phage MichaelScott, complete genome	4685-4719	8	0.771
NZ_CP006003_18	18.1\|4356366\|35\|NZ_CP006003\|CRISPRCasFinder	4356366-4356400	35	MH155867	Gordonia phage Easley, complete genome	4685-4719	8	0.771
NZ_CP006003_18	18.1\|4356366\|35\|NZ_CP006003\|CRISPRCasFinder	4356366-4356400	35	MK801729	Gordonia phage Clark, complete genome	4685-4719	8	0.771
NZ_CP006003_18	18.1\|4356366\|35\|NZ_CP006003\|CRISPRCasFinder	4356366-4356400	35	MG845393	Gordonia phage Beenie, complete genome	4685-4719	8	0.771
NZ_CP006003_25	25.1\|8885518\|31\|NZ_CP006003\|CRISPRCasFinder	8885518-8885548	31	NZ_CP018784	Curtobacterium pusillum strain AA3 plasmid pCPAA3, complete sequence	448522-448552	8	0.742
NZ_CP006003_30	30.6\|10347984\|32\|NZ_CP006003\|CRISPRCasFinder,CRT	10347984-10348015	32	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	4155345-4155376	8	0.75
NZ_CP006003_30	30.8\|10348124\|34\|NZ_CP006003\|CRISPRCasFinder,CRT	10348124-10348157	34	NZ_CP011515	Mitsuaria sp. 7 plasmid, complete sequence	156988-157021	8	0.765
NZ_CP006003_30	30.12\|10348411\|32\|NZ_CP006003\|CRISPRCasFinder,CRT	10348411-10348442	32	NC_008269	Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence	1119508-1119539	8	0.75
NZ_CP006003_30	30.14\|10348550\|32\|NZ_CP006003\|CRISPRCasFinder,CRT	10348550-10348581	32	MT897910	Mycobacterium phage VioletZ, complete genome	15623-15654	8	0.75
NZ_CP006003_30	30.14\|10348550\|32\|NZ_CP006003\|CRISPRCasFinder,CRT	10348550-10348581	32	MN369759	Mycobacterium phage Mithril, complete genome	15593-15624	8	0.75
NZ_CP006003_30	30.14\|10348550\|32\|NZ_CP006003\|CRISPRCasFinder,CRT	10348550-10348581	32	MT818419	Mycobacterium phage Lolalove, complete genome	15590-15621	8	0.75
NZ_CP006003_30	30.14\|10348550\|32\|NZ_CP006003\|CRISPRCasFinder,CRT	10348550-10348581	32	MK524486	Mycobacterium phage Waleliano, complete genome	15593-15624	8	0.75
NZ_CP006003_30	30.14\|10348550\|32\|NZ_CP006003\|CRISPRCasFinder,CRT	10348550-10348581	32	MH513970	Mycobacterium phage Hangman, complete genome	15593-15624	8	0.75
NZ_CP006003_30	30.14\|10348550\|32\|NZ_CP006003\|CRISPRCasFinder,CRT	10348550-10348581	32	MT639648	Mycobacterium phage Heath, complete genome	15590-15621	8	0.75
NZ_CP006003_30	30.14\|10348550\|32\|NZ_CP006003\|CRISPRCasFinder,CRT	10348550-10348581	32	NC_042035	Mycobacterium phage Zemanar, complete sequence	15593-15624	8	0.75
NZ_CP006003_30	30.14\|10348550\|32\|NZ_CP006003\|CRISPRCasFinder,CRT	10348550-10348581	32	NC_042034	Mycobacterium phage ChrisnMich, complete sequence	14526-14557	8	0.75
NZ_CP006003_30	30.14\|10348550\|32\|NZ_CP006003\|CRISPRCasFinder,CRT	10348550-10348581	32	NC_022331	Mycobacterium phage Bane1, complete genome	15638-15669	8	0.75
NZ_CP006003_30	30.14\|10348550\|32\|NZ_CP006003\|CRISPRCasFinder,CRT	10348550-10348581	32	KF279413	Mycobacterium phage Bane2, complete genome	15617-15648	8	0.75
NZ_CP006003_30	30.14\|10348550\|32\|NZ_CP006003\|CRISPRCasFinder,CRT	10348550-10348581	32	MT310870	Mycobacterium phage RawrgerThat, complete genome	15587-15618	8	0.75
NZ_CP006003_30	30.14\|10348550\|32\|NZ_CP006003\|CRISPRCasFinder,CRT	10348550-10348581	32	NC_028968	Mycobacterium phage BrownCNA, complete genome	15844-15875	8	0.75
NZ_CP006003_30	30.14\|10348550\|32\|NZ_CP006003\|CRISPRCasFinder,CRT	10348550-10348581	32	NZ_CP029209	Nitratireductor sp. OM-1 plasmid pOM-1, complete sequence	741116-741147	8	0.75
NZ_CP006003_30	30.14\|10348550\|32\|NZ_CP006003\|CRISPRCasFinder,CRT	10348550-10348581	32	NC_016113	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence	1047201-1047232	8	0.75
NZ_CP006003_30	30.14\|10348550\|32\|NZ_CP006003\|CRISPRCasFinder,CRT	10348550-10348581	32	NC_017585	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence	765924-765955	8	0.75
NZ_CP006003_30	30.14\|10348550\|32\|NZ_CP006003\|CRISPRCasFinder,CRT	10348550-10348581	32	JQ067093	Pseudomonas phage PaMx74, partial genome	41690-41721	8	0.75
NZ_CP006003_30	30.27\|10349467\|33\|NZ_CP006003\|CRISPRCasFinder,CRT	10349467-10349499	33	NZ_CP035512	Haematobacter massiliensis strain OT1 plasmid pOT1-2, complete sequence	315592-315624	8	0.758
NZ_CP006003_30	30.28\|10349537\|33\|NZ_CP006003\|CRISPRCasFinder,CRT	10349537-10349569	33	NZ_CP030264	Ensifer adhaerens strain Corn53 plasmid AB, complete sequence	1418480-1418512	8	0.758
NZ_CP006003_30	30.39\|10350313\|33\|NZ_CP006003\|CRISPRCasFinder,CRT,PILER-CR	10350313-10350345	33	MK059749	Mycobacterium phage CRB2, complete genome	39843-39875	8	0.758
NZ_CP006003_30	30.39\|10350313\|33\|NZ_CP006003\|CRISPRCasFinder,CRT,PILER-CR	10350313-10350345	33	NZ_CP012477	Arthrobacter sp. ERGS1:01 isolate water plasmid unnamed2, complete sequence	317277-317309	8	0.758
NZ_CP006003_30	30.39\|10350313\|33\|NZ_CP006003\|CRISPRCasFinder,CRT,PILER-CR	10350313-10350345	33	NZ_CP049142	Pseudomonas nitroreducens strain HBP1 plasmid pPniHBP1_1, complete sequence	48431-48463	8	0.758
NZ_CP006003_30	30.41\|10350457\|33\|NZ_CP006003\|CRISPRCasFinder,CRT,PILER-CR	10350457-10350489	33	MN694015	Marine virus AFVG_250M337, complete genome	1960-1992	8	0.758
NZ_CP006003_30	30.41\|10350457\|33\|NZ_CP006003\|CRISPRCasFinder,CRT,PILER-CR	10350457-10350489	33	MN694608	Marine virus AFVG_250M55, complete genome	3610-3642	8	0.758
NZ_CP006003_30	30.41\|10350457\|33\|NZ_CP006003\|CRISPRCasFinder,CRT,PILER-CR	10350457-10350489	33	MN694542	Marine virus AFVG_250M54, complete genome	35607-35639	8	0.758
NZ_CP006003_30	30.41\|10350457\|33\|NZ_CP006003\|CRISPRCasFinder,CRT,PILER-CR	10350457-10350489	33	MN694156	Marine virus AFVG_250M53, complete genome	35869-35901	8	0.758
NZ_CP006003_30	30.47\|10350879\|32\|NZ_CP006003\|CRISPRCasFinder,CRT,PILER-CR	10350879-10350910	32	NZ_CP006990	Rhizobium sp. IE4771 plasmid pRetIE4771d, complete sequence	459905-459936	8	0.75
NZ_CP006003_30	30.47\|10350879\|32\|NZ_CP006003\|CRISPRCasFinder,CRT,PILER-CR	10350879-10350910	32	CP007644	Rhizobium etli bv. phaseoli str. IE4803 plasmid pRetIE4803c, complete sequence	442333-442364	8	0.75
NZ_CP006003_30	30.75\|10348550\|33\|NZ_CP006003\|PILER-CR	10348550-10348582	33	NZ_CP032326	Azospirillum brasilense strain MTCC4035 plasmid p5, complete sequence	75546-75578	8	0.758
NZ_CP006003_30	30.75\|10348550\|33\|NZ_CP006003\|PILER-CR	10348550-10348582	33	NZ_CP029209	Nitratireductor sp. OM-1 plasmid pOM-1, complete sequence	741116-741148	8	0.758
NZ_CP006003_30	30.76\|10348619\|34\|NZ_CP006003\|PILER-CR	10348619-10348652	34	NZ_AP022333	Methylosinus sp. C49 isolate Methylosinus sp. C49 plasmid pMSC49a, complete sequence	278785-278818	8	0.765
NZ_CP006003_30	30.82\|10349043\|35\|NZ_CP006003\|PILER-CR	10349043-10349077	35	NZ_CP054613	Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence	2618552-2618586	8	0.771
NZ_CP006003_31	31.1\|11010144\|30\|NZ_CP006003\|CRISPRCasFinder	11010144-11010173	30	NZ_CP024314	Rhizobium sp. NXC24 plasmid pRspNXC24c, complete sequence	1924428-1924457	8	0.733
NZ_CP006003_31	31.1\|11010144\|30\|NZ_CP006003\|CRISPRCasFinder	11010144-11010173	30	MH697589	Microbacterium phage Neferthena, complete genome	26729-26758	8	0.733
NZ_CP006003_31	31.1\|11010144\|30\|NZ_CP006003\|CRISPRCasFinder	11010144-11010173	30	MT024862	Microbacterium phage Alakazam, complete genome	26305-26334	8	0.733
NZ_CP006003_31	31.1\|11010144\|30\|NZ_CP006003\|CRISPRCasFinder	11010144-11010173	30	MT451984	Microbacterium phage Nebulous, complete genome	27643-27672	8	0.733
NZ_CP006003_31	31.1\|11010144\|30\|NZ_CP006003\|CRISPRCasFinder	11010144-11010173	30	NC_011143	Phenylobacterium zucineum HLK1 plasmid, complete sequence	7306-7335	8	0.733
NZ_CP006003_13	13.1\|3422193\|34\|NZ_CP006003\|CRISPRCasFinder	3422193-3422226	34	HM486077	Tsukamurella phage TPA2, complete sequence	18985-19018	9	0.735
NZ_CP006003_13	13.1\|3422193\|34\|NZ_CP006003\|CRISPRCasFinder	3422193-3422226	34	NC_015210	Tsukamurella phage TPA2, complete genome	18985-19018	9	0.735
NZ_CP006003_30	30.14\|10348550\|32\|NZ_CP006003\|CRISPRCasFinder,CRT	10348550-10348581	32	LT559120	Nonomuraea sp. ATCC 39727 isolate nono1 genome assembly, plasmid: III	43878-43909	9	0.719
NZ_CP006003_30	30.14\|10348550\|32\|NZ_CP006003\|CRISPRCasFinder,CRT	10348550-10348581	32	NZ_CP007129	Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence	324787-324818	9	0.719
NZ_CP006003_30	30.14\|10348550\|32\|NZ_CP006003\|CRISPRCasFinder,CRT	10348550-10348581	32	NZ_CP043441	Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence	2718410-2718441	9	0.719
NZ_CP006003_30	30.14\|10348550\|32\|NZ_CP006003\|CRISPRCasFinder,CRT	10348550-10348581	32	EU307292	Burkholderia phage Bups phi1 clone 2 partial sequence	2270-2301	9	0.719
NZ_CP006003_30	30.14\|10348550\|32\|NZ_CP006003\|CRISPRCasFinder,CRT	10348550-10348581	32	MN428050	Mycobacterium phage Apex, complete genome	15771-15802	9	0.719
NZ_CP006003_30	30.14\|10348550\|32\|NZ_CP006003\|CRISPRCasFinder,CRT	10348550-10348581	32	MN234171	Mycobacterium phage Magpie, complete genome	15775-15806	9	0.719
NZ_CP006003_30	30.14\|10348550\|32\|NZ_CP006003\|CRISPRCasFinder,CRT	10348550-10348581	32	KX589269	Mycobacterium phage Fortunato, complete genome	15584-15615	9	0.719
NZ_CP006003_30	30.14\|10348550\|32\|NZ_CP006003\|CRISPRCasFinder,CRT	10348550-10348581	32	MH632120	Mycobacterium phage Thonko, complete genome	13430-13461	9	0.719
NZ_CP006003_30	30.21\|10349043\|34\|NZ_CP006003\|CRISPRCasFinder,CRT	10349043-10349076	34	NZ_CP031116	Rubrobacter indicoceani strain SCSIO 08198 plasmid unnamed1, complete sequence	79607-79640	9	0.735
NZ_CP006003_30	30.21\|10349043\|34\|NZ_CP006003\|CRISPRCasFinder,CRT	10349043-10349076	34	NZ_CP030829	Neorhizobium sp. NCHU2750 plasmid pNCHU2750b, complete sequence	255665-255698	9	0.735
NZ_CP006003_30	30.28\|10349537\|33\|NZ_CP006003\|CRISPRCasFinder,CRT	10349537-10349569	33	NZ_CP015882	Ensifer adhaerens strain Casida A plasmid pCasidaAB, complete sequence	1044246-1044278	9	0.727
NZ_CP006003_30	30.28\|10349537\|33\|NZ_CP006003\|CRISPRCasFinder,CRT	10349537-10349569	33	NZ_CP053709	Acetobacteraceae bacterium strain PAMC 26569 plasmid unnamed1, complete sequence	59965-59997	9	0.727
NZ_CP006003_30	30.31\|10349747\|36\|NZ_CP006003\|CRISPRCasFinder,CRT	10349747-10349782	36	NZ_CP018621	Paenibacillus xylanexedens strain PAMC 22703 plasmid unnamed, complete sequence	7006-7041	9	0.75
NZ_CP006003_30	30.39\|10350313\|33\|NZ_CP006003\|CRISPRCasFinder,CRT,PILER-CR	10350313-10350345	33	NZ_CP022605	Ochrobactrum quorumnocens strain A44 plasmid unnamed1, complete sequence	303291-303323	9	0.727
NZ_CP006003_30	30.58\|10351658\|32\|NZ_CP006003\|CRISPRCasFinder,CRT,PILER-CR	10351658-10351689	32	NZ_CP020900	Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRphaBra5d, complete sequence	202288-202319	9	0.719
NZ_CP006003_30	30.58\|10351658\|32\|NZ_CP006003\|CRISPRCasFinder,CRT,PILER-CR	10351658-10351689	32	NZ_CP013556	Rhizobium phaseoli strain N931 plasmid pRphaN931d, complete sequence	233299-233330	9	0.719
NZ_CP006003_30	30.58\|10351658\|32\|NZ_CP006003\|CRISPRCasFinder,CRT,PILER-CR	10351658-10351689	32	NZ_CP013562	Rhizobium phaseoli strain N841 plasmid pRphaN841e, complete sequence	233301-233332	9	0.719
NZ_CP006003_30	30.58\|10351658\|32\|NZ_CP006003\|CRISPRCasFinder,CRT,PILER-CR	10351658-10351689	32	NZ_CP013531	Rhizobium phaseoli strain R723 plasmid pRphaR723d, complete sequence	231782-231813	9	0.719
NZ_CP006003_30	30.58\|10351658\|32\|NZ_CP006003\|CRISPRCasFinder,CRT,PILER-CR	10351658-10351689	32	NZ_CP013567	Rhizobium phaseoli strain N831 plasmid pRphaN831d, complete sequence	233299-233330	9	0.719
NZ_CP006003_30	30.58\|10351658\|32\|NZ_CP006003\|CRISPRCasFinder,CRT,PILER-CR	10351658-10351689	32	NZ_CP013584	Rhizobium phaseoli strain N261 plasmid pRphaN261d, complete sequence	231782-231813	9	0.719
NZ_CP006003_30	30.58\|10351658\|32\|NZ_CP006003\|CRISPRCasFinder,CRT,PILER-CR	10351658-10351689	32	NC_010997	Rhizobium etli CIAT 652 plasmid pC, complete sequence	224511-224542	9	0.719
NZ_CP006003_30	30.88\|10349467\|34\|NZ_CP006003\|PILER-CR	10349467-10349500	34	NZ_CP035512	Haematobacter massiliensis strain OT1 plasmid pOT1-2, complete sequence	315591-315624	9	0.735
NZ_CP006003_30	30.89\|10349537\|34\|NZ_CP006003\|PILER-CR	10349537-10349570	34	NC_016586	Azospirillum lipoferum 4B plasmid AZO_p2, complete sequence	464436-464469	9	0.735
NZ_CP006003_30	30.89\|10349537\|34\|NZ_CP006003\|PILER-CR	10349537-10349570	34	NZ_CP030264	Ensifer adhaerens strain Corn53 plasmid AB, complete sequence	1418480-1418513	9	0.735
NZ_CP006003_30	30.89\|10349537\|34\|NZ_CP006003\|PILER-CR	10349537-10349570	34	NC_048135	UNVERIFIED: Enterobacter phage EcpYZU01, complete genome	9686-9719	9	0.735
NZ_CP006003_13	13.1\|3422193\|34\|NZ_CP006003\|CRISPRCasFinder	3422193-3422226	34	CP054921	Streptomyces sp. NA03103 plasmid unnamed1, complete sequence	84446-84479	10	0.706
NZ_CP006003_25	25.1\|8885518\|31\|NZ_CP006003\|CRISPRCasFinder	8885518-8885548	31	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	1133330-1133360	10	0.677
NZ_CP006003_25	25.1\|8885518\|31\|NZ_CP006003\|CRISPRCasFinder	8885518-8885548	31	NZ_CP023071	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence	1096919-1096949	10	0.677
NZ_CP006003_25	25.1\|8885518\|31\|NZ_CP006003\|CRISPRCasFinder	8885518-8885548	31	NZ_CP029232	Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence	971764-971794	10	0.677
NZ_CP006003_30	30.9\|10348195\|34\|NZ_CP006003\|CRISPRCasFinder,CRT	10348195-10348228	34	NZ_CP040824	Paraoceanicella profunda strain D4M1 plasmid pD4M1F, complete sequence	61844-61877	10	0.706
NZ_CP006003_30	30.21\|10349043\|34\|NZ_CP006003\|CRISPRCasFinder,CRT	10349043-10349076	34	LN889756	Pseudomonas phage shl2 genome assembly, chromosome: 1	36901-36934	10	0.706
NZ_CP006003_30	30.21\|10349043\|34\|NZ_CP006003\|CRISPRCasFinder,CRT	10349043-10349076	34	MT104465	Pseudomonas phage MR1, complete genome	18204-18237	10	0.706
NZ_CP006003_30	30.21\|10349043\|34\|NZ_CP006003\|CRISPRCasFinder,CRT	10349043-10349076	34	LN913017	Pseudomonas phage HC15b2 genome assembly HC15b2, chromosome : 1	25551-25584	10	0.706
NZ_CP006003_30	30.21\|10349043\|34\|NZ_CP006003\|CRISPRCasFinder,CRT	10349043-10349076	34	KU064779	Pseudomonas phage PPPL-1, complete genome	21719-21752	10	0.706
NZ_CP006003_30	30.28\|10349537\|33\|NZ_CP006003\|CRISPRCasFinder,CRT	10349537-10349569	33	NC_007974	Cupriavidus metallidurans CH34 megaplasmid, complete sequence	1520285-1520317	10	0.697
NZ_CP006003_30	30.28\|10349537\|33\|NZ_CP006003\|CRISPRCasFinder,CRT	10349537-10349569	33	NZ_CP046333	Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3	305840-305872	10	0.697
NZ_CP006003_30	30.47\|10350879\|32\|NZ_CP006003\|CRISPRCasFinder,CRT,PILER-CR	10350879-10350910	32	NZ_CP020331	Martelella mediterranea DSM 17316 strain MACL11 plasmid pMM593, complete sequence	449926-449957	10	0.688
NZ_CP006003_30	30.75\|10348550\|33\|NZ_CP006003\|PILER-CR	10348550-10348582	33	LT559120	Nonomuraea sp. ATCC 39727 isolate nono1 genome assembly, plasmid: III	43877-43909	10	0.697
NZ_CP006003_30	30.89\|10349537\|34\|NZ_CP006003\|PILER-CR	10349537-10349570	34	NZ_CP015882	Ensifer adhaerens strain Casida A plasmid pCasidaAB, complete sequence	1044245-1044278	10	0.706
NZ_CP006003_30	30.89\|10349537\|34\|NZ_CP006003\|PILER-CR	10349537-10349570	34	NC_007974	Cupriavidus metallidurans CH34 megaplasmid, complete sequence	1520285-1520318	10	0.706
NZ_CP006003_30	30.89\|10349537\|34\|NZ_CP006003\|PILER-CR	10349537-10349570	34	NZ_CP046333	Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3	305840-305873	10	0.706
NZ_CP006003_30	30.89\|10349537\|34\|NZ_CP006003\|PILER-CR	10349537-10349570	34	NZ_CP053709	Acetobacteraceae bacterium strain PAMC 26569 plasmid unnamed1, complete sequence	59965-59998	10	0.706
NZ_CP006003_30	30.92\|10349747\|37\|NZ_CP006003\|PILER-CR	10349747-10349783	37	NZ_CP018621	Paenibacillus xylanexedens strain PAMC 22703 plasmid unnamed, complete sequence	7006-7042	10	0.73
NZ_CP006003_30	30.7\|10348053\|34\|NZ_CP006003\|CRISPRCasFinder,CRT	10348053-10348086	34	NZ_CP013003	Caulobacter henricii strain CB4 plasmid pCB4, complete sequence	69578-69611	11	0.676
NZ_CP006003_30	30.9\|10348195\|34\|NZ_CP006003\|CRISPRCasFinder,CRT	10348195-10348228	34	NZ_CP032685	Rhizobium sp. CCGE531 plasmid pRCCGE531d, complete sequence	155070-155103	11	0.676
NZ_CP006003_30	30.9\|10348195\|34\|NZ_CP006003\|CRISPRCasFinder,CRT	10348195-10348228	34	NZ_CP032690	Rhizobium sp. CCGE532 plasmid pRCCGE532d, complete sequence	155070-155103	11	0.676
NZ_CP006003_30	30.30\|10349676\|34\|NZ_CP006003\|CRISPRCasFinder,CRT	10349676-10349709	34	MF098555	Cyanophage BHS3, partial genome	9182-9215	11	0.676
NZ_CP006003_30	30.39\|10350313\|33\|NZ_CP006003\|CRISPRCasFinder,CRT,PILER-CR	10350313-10350345	33	NZ_CP021372	Rhizobium sp. ACO-34A plasmid pRACO34Ad, complete sequence	213578-213610	11	0.667
NZ_CP006003_30	30.70\|10348195\|35\|NZ_CP006003\|PILER-CR	10348195-10348229	35	NZ_CP040824	Paraoceanicella profunda strain D4M1 plasmid pD4M1F, complete sequence	61843-61877	11	0.686

1. spacer 29.1|9908736|21|NZ_CP006003|CRISPRCasFinder matches to NZ_CP033582 (Streptomyces sp. ADI95-16 plasmid pADI95-16a, complete sequence) position: , mismatch: 1, identity: 0.952

accagcaggcgagccaccggt	CRISPR spacer
gccagcaggcgagccaccggt	Protospacer
.********************

2. spacer 7.1|1588752|25|NZ_CP006003|CRISPRCasFinder matches to NZ_CP027859 (Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence) position: , mismatch: 2, identity: 0.92

cgcgggggccggcgtctccagggcc	CRISPR spacer
cgcgggggccggcggctccagggcg	Protospacer
************** *********

3. spacer 7.1|1588752|25|NZ_CP006003|CRISPRCasFinder matches to NZ_CP016560 (Streptomyces clavuligerus strain F613-1 plasmid pSCL4, complete sequence) position: , mismatch: 2, identity: 0.92

cgcgggggccggcgtctccagggcc	CRISPR spacer
cgcgggggccggcggctccagggcg	Protospacer
************** *********

4. spacer 7.1|1588752|25|NZ_CP006003|CRISPRCasFinder matches to NZ_CP032054 (Streptomyces clavuligerus strain F1D-5 plasmid pSCL1, complete sequence) position: , mismatch: 2, identity: 0.92

cgcgggggccggcgtctccagggcc	CRISPR spacer
cgcgggggccggcggctccagggcg	Protospacer
************** *********

5. spacer 12.2|2955828|26|NZ_CP006003|CRT matches to NZ_CP014519 (Sinomonas atrocyanea strain KCTC 3377 plasmid pSA01, complete sequence) position: , mismatch: 2, identity: 0.923

ggcggcgtcgtagccgaaggcgtccg	CRISPR spacer
ggcggggtcgtagccgaaggcgtcgg	Protospacer
***** ****************** *

6. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NC_014309 (Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

7. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to CP023013 (Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

8. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP021653 (Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

9. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP049790 (Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

10. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP022766 (Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

11. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP021763 (Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

12. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP021767 (Ralstonia solanacearum strain RS 489 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

13. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP015116 (Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

14. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP016555 (Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

15. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP012940 (Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

16. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP012688 (Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

17. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP052069 (Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

18. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP016915 (Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

19. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP016905 (Ralstonia solanacearum strain KACC 10709 plasmid unnamed1) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

20. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP022769 (Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

21. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP022773 (Ralstonia solanacearum strain T42 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

22. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP022783 (Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

23. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP022791 (Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

24. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP022795 (Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

25. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP052071 (Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

26. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP009763 (Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

27. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to CP023015 (Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

28. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP022779 (Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

29. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP052075 (Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

30. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP052085 (Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

31. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP052095 (Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

32. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP052105 (Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

33. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP021765 (Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

34. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP052077 (Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

35. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP052087 (Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

36. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP052097 (Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

37. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP052115 (Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

38. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP052127 (Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

39. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP052079 (Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

40. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP052089 (Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

41. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP052093 (Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

42. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP052101 (Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

43. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP052099 (Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

44. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP052107 (Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

45. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP052117 (Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

46. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP052125 (Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

47. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP022793 (Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

48. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP022785 (Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

49. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP022787 (Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

50. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP022756 (Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

51. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP052129 (Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

52. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP052121 (Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

53. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP052123 (Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

54. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP052131 (Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

55. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP052073 (Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

56. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP052081 (Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

57. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP052083 (Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

58. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP052109 (Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

59. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP052091 (Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

60. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP052103 (Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

61. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP052119 (Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

62. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP016613 (Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

63. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP021449 (Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

64. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP021449 (Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

65. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP026091 (Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

66. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP049794 (Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

67. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP049788 (Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

68. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP026093 (Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

69. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP012944 (Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

70. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP049792 (Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

71. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP025986 (Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

72. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP015851 (Ralstonia solanacearum strain YC40-M plasmid, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

73. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NC_017575 (Ralstonia solanacearum Po82 megaplasmid, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

74. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP022482 (Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

75. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP026308 (Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

76. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to CP047139 (Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

77. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to CP047137 (Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

78. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP022781 (Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

79. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to CP011998 (Ralstonia solanacearum strain YC45 plasmid, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

80. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP052111 (Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

81. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP052113 (Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcggcgctggcgcccatggcga	Protospacer
**********.***********

82. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NC_007766 (Rhizobium etli CFN 42 plasmid p42f, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcgccgctgaggcccatggcgc	Protospacer
**** ****** ***********

83. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP006990 (Rhizobium sp. IE4771 plasmid pRetIE4771d, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcgccgctgaggcccatggcgc	Protospacer
**** ****** ***********

84. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP021029 (Rhizobium sp. TAL182 plasmid pRetTAL182e, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcgccgctgaggcccatggcgc	Protospacer
**** ****** ***********

85. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP020911 (Rhizobium etli strain NXC12 plasmid pRetNXC12e, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcgccgctgaggcccatggcgc	Protospacer
**** ****** ***********

86. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP013600 (Rhizobium sp. N741 plasmid pRspN741e, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcgccgctgaggcccatggcgc	Protospacer
**** ****** ***********

87. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NC_021911 (Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1f, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcgccgctgaggcccatggcgc	Protospacer
**** ****** ***********

88. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP013504 (Rhizobium esperanzae strain N561 plasmid pRspN561d, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcgccgctgaggcccatggcgc	Protospacer
**** ****** ***********

89. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP013510 (Rhizobium sp. N1341 plasmid pRspN1341e, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcgccgctgaggcccatggcgc	Protospacer
**** ****** ***********

90. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP013521 (Rhizobium sp. N113 plasmid pRspN113d, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcgccgctgaggcccatggcgc	Protospacer
**** ****** ***********

91. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP021127 (Rhizobium sp. Kim5 plasmid pRetKim5c, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcgccgctgaggcccatggcgc	Protospacer
**** ****** ***********

92. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP013494 (Rhizobium sp. N6212 plasmid pRspN6212d, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcgccgctgaggcccatggcgc	Protospacer
**** ****** ***********

93. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP013515 (Rhizobium sp. N1314 plasmid pRspN1314d, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcgccgctgaggcccatggcgc	Protospacer
**** ****** ***********

94. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP054028 (Rhizobium sp. JKLM19E plasmid pPR19E01, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcgccgctgaggcccatggcgc	Protospacer
**** ****** ***********

95. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP013594 (Rhizobium sp. N871 plasmid pRspN871d, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcgccgctgaggcccatggcgc	Protospacer
**** ****** ***********

96. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to CP007644 (Rhizobium etli bv. phaseoli str. IE4803 plasmid pRetIE4803c, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcgccgctgaggcccatggcgc	Protospacer
**** ****** ***********

97. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP013605 (Rhizobium sp. N731 plasmid pRspN731d, complete sequence) position: , mismatch: 2, identity: 0.913

ctcggcgctgacgcccatggcgc	CRISPR spacer
ctcgccgctgaggcccatggcgc	Protospacer
**** ****** ***********

98. spacer 7.1|1588752|25|NZ_CP006003|CRISPRCasFinder matches to NZ_CP029341 (Streptomyces sp. SM17 plasmid pSM17C, complete sequence) position: , mismatch: 3, identity: 0.88

cgcgggggccggcgtctccagggcc	CRISPR spacer
cgcgggggccggcggcgccaggggc	Protospacer
************** * ****** *

99. spacer 12.1|2955771|26|NZ_CP006003|CRT matches to MN096367 (Microbacterium phage Nucci, complete genome) position: , mismatch: 3, identity: 0.885

gcccgtgtcgtagccgtaggggtcgg	CRISPR spacer
cccggtggcgtagccgtaggggtcgg	Protospacer
 ** *** ******************

100. spacer 12.2|2955828|26|NZ_CP006003|CRT matches to NZ_CP007794 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence) position: , mismatch: 3, identity: 0.885

ggcggcgtcgtagccgaaggcgtccg	CRISPR spacer
ggcggcgtcgaagccgagggcgtcca	Protospacer
********** ******.*******.

101. spacer 12.2|2955828|26|NZ_CP006003|CRT matches to CP040467 (Streptomyces albidoflavus strain UYFA156 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.885

ggcggcgtcgtagccgaaggcgtccg	CRISPR spacer
ggcggcgtcgtagacgaaggcgccct	Protospacer
************* ********.**

102. spacer 12.2|2955828|26|NZ_CP006003|CRT matches to NZ_CP021653 (Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.885

ggcggcgtcgtagccgaaggcgtccg	CRISPR spacer
gggggcgtcgtagccgaaggcttctg	Protospacer
** ****************** **.*

103. spacer 12.2|2955828|26|NZ_CP006003|CRT matches to NZ_CP021767 (Ralstonia solanacearum strain RS 489 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.885

ggcggcgtcgtagccgaaggcgtccg	CRISPR spacer
gggggcgtcgtagccgaaggcttctg	Protospacer
** ****************** **.*

104. spacer 12.2|2955828|26|NZ_CP006003|CRT matches to NZ_CP012944 (Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.885

ggcggcgtcgtagccgaaggcgtccg	CRISPR spacer
gggggcgtcgtagccgaaggcttctg	Protospacer
** ****************** **.*

105. spacer 12.2|2955828|26|NZ_CP006003|CRT matches to NZ_CP012688 (Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.885

ggcggcgtcgtagccgaaggcgtccg	CRISPR spacer
gggggcgtcgtagccgaaggcttctg	Protospacer
** ****************** **.*

106. spacer 12.2|2955828|26|NZ_CP006003|CRT matches to MT855965 (Microcystis phage vB_MaeS-yong1, complete genome) position: , mismatch: 3, identity: 0.885

ggcggcgtcgtagccgaaggcgtccg	CRISPR spacer
gccggcgtcgtagccgaaggcgatcg	Protospacer
* ******************** .**

107. spacer 12.2|2955828|26|NZ_CP006003|CRT matches to CP047139 (Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.885

ggcggcgtcgtagccgaaggcgtccg	CRISPR spacer
gggggcgtcgtagccgaaggcttctg	Protospacer
** ****************** **.*

108. spacer 12.2|2955828|26|NZ_CP006003|CRT matches to CP047137 (Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.885

ggcggcgtcgtagccgaaggcgtccg	CRISPR spacer
gggggcgtcgtagccgaaggcttctg	Protospacer
** ****************** **.*

109. spacer 12.6|2956053|26|NZ_CP006003|CRT matches to MT855965 (Microcystis phage vB_MaeS-yong1, complete genome) position: , mismatch: 3, identity: 0.885

gccggcgtcgtagccgaagccgcccg	CRISPR spacer
gccggcgtcgtagccgaaggcgatcg	Protospacer
******************* ** .**

110. spacer 12.6|2956053|26|NZ_CP006003|CRT matches to DQ115846 (Cyanobacteria phage AS-1 contig_39 genomic sequence) position: , mismatch: 3, identity: 0.885

-gccggcgtcgtagccgaagccgcccg	CRISPR spacer
caccgg-gtcgtagccgaagccgccct	Protospacer
 .**** *******************

111. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP013069 (Pannonibacter phragmitetus strain 31801 plasmid p.p-1, complete sequence) position: , mismatch: 3, identity: 0.87

ctcggcgctgacgcccatggcgc	CRISPR spacer
ggcggtgctgacgcccatggcgc	Protospacer
  ***.*****************

112. spacer 12.7|2956110|23|NZ_CP006003|CRT matches to NZ_CP032313 (Pannonibacter phragmitetus BB plasmid p.BB_1, complete sequence) position: , mismatch: 3, identity: 0.87

ctcggcgctgacgcccatggcgc	CRISPR spacer
ggcggtgctgacgcccatggcgc	Protospacer
  ***.*****************

113. spacer 7.1|1588752|25|NZ_CP006003|CRISPRCasFinder matches to MN693655 (Marine virus AFVG_250M932, complete genome) position: , mismatch: 4, identity: 0.84

cgcgggggccggcgtctccagggcc	CRISPR spacer
cgagggggccggcatctccagggaa	Protospacer
** **********.*********

114. spacer 7.1|1588752|25|NZ_CP006003|CRISPRCasFinder matches to MN694160 (Marine virus AFVG_250M933, complete genome) position: , mismatch: 4, identity: 0.84

cgcgggggccggcgtctccagggcc	CRISPR spacer
cgagggggccggcatctccagggaa	Protospacer
** **********.*********

115. spacer 7.1|1588752|25|NZ_CP006003|CRISPRCasFinder matches to NZ_CP007794 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence) position: , mismatch: 4, identity: 0.84

cgcgggggccggcgtctccagggcc	CRISPR spacer
gccgggggccggcgcctccacggcc	Protospacer
  ************.***** ****

116. spacer 7.1|1588752|25|NZ_CP006003|CRISPRCasFinder matches to CP052389 (Klebsiella pneumoniae strain C17KP0052 plasmid pC17KP0052-1) position: , mismatch: 4, identity: 0.84

cgcgggggccggcgtctccagggcc	CRISPR spacer
cgcggcggccggcgtcaccagggtt	Protospacer
***** ********** ******..

117. spacer 7.1|1588752|25|NZ_CP006003|CRISPRCasFinder matches to NZ_CP025552 (Streptomyces rimosus strain WT5260 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.84

cgcgggggccggcgtctccagggcc	CRISPR spacer
ggcggggaccgccgtctccagggcg	Protospacer
 ******.*** ************

118. spacer 12.1|2955771|26|NZ_CP006003|CRT matches to MN284901 (Microbacterium phage YuuY, complete genome) position: , mismatch: 4, identity: 0.846

gcccgtgtcgtagccgtaggggtcgg	CRISPR spacer
gcccgtggagtagccgtaggggttcg	Protospacer
*******  **************. *

119. spacer 12.2|2955828|26|NZ_CP006003|CRT matches to NZ_CP021653 (Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.846

ggcggcgtcgtagccgaaggcgtccg	CRISPR spacer
ggccgcgtcgtagccgaacgcgtacc	Protospacer
*** ************** **** *

120. spacer 12.2|2955828|26|NZ_CP006003|CRT matches to NZ_CP021767 (Ralstonia solanacearum strain RS 489 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.846

ggcggcgtcgtagccgaaggcgtccg	CRISPR spacer
ggccgcgtcgtaaccgaaggcgtacc	Protospacer
*** ********.********** *

121. spacer 12.2|2955828|26|NZ_CP006003|CRT matches to NZ_CP012944 (Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.846

ggcggcgtcgtagccgaaggcgtccg	CRISPR spacer
ggccgcgtcgtaaccgaaggcgtacc	Protospacer
*** ********.********** *

122. spacer 12.2|2955828|26|NZ_CP006003|CRT matches to NZ_CP012688 (Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.846

ggcggcgtcgtagccgaaggcgtccg	CRISPR spacer
ggccgcgtcgtagccgaacgcgtacc	Protospacer
*** ************** **** *

123. spacer 12.2|2955828|26|NZ_CP006003|CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 4, identity: 0.846

ggcggcgtcgtagccgaaggcgtccg	CRISPR spacer
ggcggcgtcgtcgccgaagtcgtcgt	Protospacer
*********** ******* ****

124. spacer 12.2|2955828|26|NZ_CP006003|CRT matches to CP047139 (Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.846

ggcggcgtcgtagccgaaggcgtccg	CRISPR spacer
ggccgcgtcgtagccgaacgcgtacc	Protospacer
*** ************** **** *

125. spacer 12.2|2955828|26|NZ_CP006003|CRT matches to NC_014309 (Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome) position: , mismatch: 4, identity: 0.846

ggcggcgtcgtagccgaaggcgtccg	CRISPR spacer
ggccgcgtcgtaaccgaaggcgtacc	Protospacer
*** ********.********** *

126. spacer 12.2|2955828|26|NZ_CP006003|CRT matches to NZ_CP026091 (Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.846

ggcggcgtcgtagccgaaggcgtccg	CRISPR spacer
ggccgcgtcgtaaccgaaggcgtacc	Protospacer
*** ********.********** *

127. spacer 12.2|2955828|26|NZ_CP006003|CRT matches to NZ_CP027859 (Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence) position: , mismatch: 4, identity: 0.846

ggcggcgtcgtagccgaaggcgtccg	CRISPR spacer
gacggcgtcgtagccgagggtgtcca	Protospacer
*.***************.**.****.

128. spacer 12.2|2955828|26|NZ_CP006003|CRT matches to NZ_LR134451 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 9, complete sequence) position: , mismatch: 4, identity: 0.846

ggcggcgtcgtagccgaaggcgtccg	CRISPR spacer
gacgctgtcgtagccgaaggcgtcca	Protospacer
*.** .*******************.

129. spacer 12.2|2955828|26|NZ_CP006003|CRT matches to NZ_CP026093 (Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.846

ggcggcgtcgtagccgaaggcgtccg	CRISPR spacer
ggccgcgtcgtaaccgaaggcgtacc	Protospacer
*** ********.********** *

130. spacer 12.2|2955828|26|NZ_CP006003|CRT matches to NZ_CP012940 (Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.846

ggcggcgtcgtagccgaaggcgtccg	CRISPR spacer
ggccgcgtcgtaaccgaaggcgtacc	Protospacer
*** ********.********** *

131. spacer 12.2|2955828|26|NZ_CP006003|CRT matches to NZ_CP041653 (Streptomyces sp. RLB1-9 plasmid pRLB1-9.1, complete sequence) position: , mismatch: 4, identity: 0.846

ggcggcgtcgtagccgaaggcgtccg	CRISPR spacer
cgctccggcgtagccgaaggcgtccg	Protospacer
 **  ** ******************

132. spacer 12.2|2955828|26|NZ_CP006003|CRT matches to NC_017575 (Ralstonia solanacearum Po82 megaplasmid, complete sequence) position: , mismatch: 4, identity: 0.846

ggcggcgtcgtagccgaaggcgtccg	CRISPR spacer
ggccgcgtcgtaaccgaaggcgtacc	Protospacer
*** ********.********** *

133. spacer 12.2|2955828|26|NZ_CP006003|CRT matches to NZ_CP026308 (Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.846

ggcggcgtcgtagccgaaggcgtccg	CRISPR spacer
ggccgcgtcgtaaccgaaggcgtacc	Protospacer
*** ********.********** *

134. spacer 12.2|2955828|26|NZ_CP006003|CRT matches to NZ_CP051295 (Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence) position: , mismatch: 4, identity: 0.846

ggcggcgtcgtagccgaaggcgtccg	CRISPR spacer
ggccgcgtcgtaaccgaaggcgtacc	Protospacer
*** ********.********** *

135. spacer 12.6|2956053|26|NZ_CP006003|CRT matches to NZ_CP032340 (Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence) position: , mismatch: 4, identity: 0.846

gccggcgtcgtagccgaagccgcccg	CRISPR spacer
gtcggcctcgtaggcgaagccgccct	Protospacer
*.**** ****** ***********

136. spacer 12.6|2956053|26|NZ_CP006003|CRT matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 4, identity: 0.846

gccggcgtcgtagccgaagccgcccg	CRISPR spacer
gtcggcctcgtaggcgaagccgccct	Protospacer
*.**** ****** ***********

137. spacer 12.6|2956053|26|NZ_CP006003|CRT matches to NZ_CP007794 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence) position: , mismatch: 4, identity: 0.846

gccggcgtcgtagccgaagccgcccg	CRISPR spacer
gtcggcctcgtaggcgaagccgccct	Protospacer
*.**** ****** ***********

138. spacer 12.6|2956053|26|NZ_CP006003|CRT matches to NC_008826 (Methylibium petroleiphilum PM1 plasmid RPME01, complete sequence) position: , mismatch: 4, identity: 0.846

gccggcgtcgtagccgaagccgcccg	CRISPR spacer
gaaggcctggtagccgaagccgcccg	Protospacer
*  *** * *****************

139. spacer 12.6|2956053|26|NZ_CP006003|CRT matches to NZ_CP040819 (Paraoceanicella profunda strain D4M1 plasmid pD4M1A, complete sequence) position: , mismatch: 4, identity: 0.846

gccggcgtcgtagccgaagccgcccg	CRISPR spacer
gccgtcgtcgtagccgaagcggcgca	Protospacer
**** *************** ** *.

140. spacer 12.6|2956053|26|NZ_CP006003|CRT matches to CP040467 (Streptomyces albidoflavus strain UYFA156 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.846

gccggcgtcgtagccgaagccgcccg	CRISPR spacer
ggcggcgtcgtagacgaaggcgccct	Protospacer
* *********** ***** *****

141. spacer 12.6|2956053|26|NZ_CP006003|CRT matches to NZ_CP012915 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence) position: , mismatch: 4, identity: 0.846

gccggcgtcgtagccgaagccgcccg	CRISPR spacer
gtcggcctcgtaggcgaagccgccct	Protospacer
*.**** ****** ***********

142. spacer 16.1|3877979|27|NZ_CP006003|CRISPRCasFinder matches to NZ_CP021083 (Deinococcus ficus strain CC-FR2-10 plasmid pDFI2, complete sequence) position: , mismatch: 4, identity: 0.852

tggcgccgcggcgccttccggacgagc	CRISPR spacer
ggtcgccgcgtcgccttctggacgagc	Protospacer
 * ******* *******.********

143. spacer 2.1|244182|30|NZ_CP006003|CRISPRCasFinder matches to MN304815 (Burkholderiales phage 68_11, complete genome) position: , mismatch: 5, identity: 0.833

aacatcatcgcgctggagccc-tcgacggga	CRISPR spacer
aacatcctcgcgctggagcccaccgacaag-	Protospacer
****** ************** .****..*

144. spacer 12.1|2955771|26|NZ_CP006003|CRT matches to NZ_CP030764 (Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed4, complete sequence) position: , mismatch: 5, identity: 0.808

gcccgtgtcgtagccgtaggggtcgg	CRISPR spacer
cgccgtgtcgtagccgaagggatcga	Protospacer
  ************** ****.***.

145. spacer 12.1|2955771|26|NZ_CP006003|CRT matches to NZ_CP020568 (Kitasatospora aureofaciens strain DM-1 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.808

gcccgtgtcgtagccgtaggggtcgg	CRISPR spacer
cacgttgtcgtagccgtagcggtcgg	Protospacer
  *  ************** ******

146. spacer 12.2|2955828|26|NZ_CP006003|CRT matches to KR011063 (Tsukamurella phage TIN3, complete genome) position: , mismatch: 5, identity: 0.808

ggcggcgtcgtagccgaaggcgtccg	CRISPR spacer
ggcggagtcggagccgaaggcgtgtc	Protospacer
***** **** ************ .

147. spacer 12.2|2955828|26|NZ_CP006003|CRT matches to KR011064 (Tsukamurella phage TIN4, complete genome) position: , mismatch: 5, identity: 0.808

ggcggcgtcgtagccgaaggcgtccg	CRISPR spacer
ggcggagtcggagccgaaggcgtgtc	Protospacer
***** **** ************ .

148. spacer 12.2|2955828|26|NZ_CP006003|CRT matches to NZ_LR536452 (Methylocella tundrae isolate MTUNDRAET4 annotated genome plasmid 3) position: , mismatch: 5, identity: 0.808

ggcggcgtcgtagccgaaggcgtccg	CRISPR spacer
cgcggcgtcgtaatcgaaggcgtcga	Protospacer
 ***********..********** .

149. spacer 12.2|2955828|26|NZ_CP006003|CRT matches to NZ_CP016284 (Cryobacterium arcticum strain PAMC 27867 plasmid pP27867_2, complete sequence) position: , mismatch: 5, identity: 0.808

ggcggcgtcgtagccgaaggcgtccg	CRISPR spacer
agcggcgtcgtagccgagggcggcgt	Protospacer
.****************.**** *

150. spacer 12.2|2955828|26|NZ_CP006003|CRT matches to NZ_CP048424 (Rhizobium daejeonense strain KACC 13094 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.808

ggcggcgtcgtagccgaaggcgtccg	CRISPR spacer
ggcggcgccgtagccgaagtcgtttt	Protospacer
*******.*********** ***..

151. spacer 12.2|2955828|26|NZ_CP006003|CRT matches to NZ_CP032695 (Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence) position: , mismatch: 5, identity: 0.808

ggcggcgtcgtagccgaaggcgtccg	CRISPR spacer
catggcgtcgtagccgtaggcgcccg	Protospacer
 ..************* *****.***

152. spacer 12.3|2955885|26|NZ_CP006003|CRT matches to NC_048046 (Caulobacter phage CcrPW, complete genome) position: , mismatch: 5, identity: 0.808

ccccccatcgtagccgtaggggtccg	CRISPR spacer
ctccccatcgtagccgttggggtagc	Protospacer
*.*************** *****

153. spacer 12.6|2956053|26|NZ_CP006003|CRT matches to NZ_CP022762 (Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.808

gccggcgtcgtagccgaagccgcccg	CRISPR spacer
cccggcatcgtggccgaagccgccga	Protospacer
 *****.****.************ .

154. spacer 12.6|2956053|26|NZ_CP006003|CRT matches to NZ_LR134466 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 24, complete sequence) position: , mismatch: 5, identity: 0.808

gccggcgtcgtagccgaagccgcccg	CRISPR spacer
gtgggcgtcgtagccgaagacgccgt	Protospacer
*. **************** ****

155. spacer 12.6|2956053|26|NZ_CP006003|CRT matches to NZ_CP029830 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.808

gccggcgtcgtagccgaagccgcccg	CRISPR spacer
atcggcgttgtagacgaagccgccct	Protospacer
..******.**** ***********

156. spacer 12.6|2956053|26|NZ_CP006003|CRT matches to NZ_CP014703 (Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence) position: , mismatch: 5, identity: 0.808

gccggcgtcgtagccgaagccgcccg	CRISPR spacer
cccggcatcgtggccgaagccgccga	Protospacer
 *****.****.************ .

157. spacer 12.6|2956053|26|NZ_CP006003|CRT matches to NZ_CP022771 (Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.808

gccggcgtcgtagccgaagccgcccg	CRISPR spacer
cccggcatcgtggccgaagccgccga	Protospacer
 *****.****.************ .

158. spacer 12.6|2956053|26|NZ_CP006003|CRT matches to NZ_CP022777 (Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.808

gccggcgtcgtagccgaagccgcccg	CRISPR spacer
cccggcatcgtggccgaagccgccga	Protospacer
 *****.****.************ .

159. spacer 12.6|2956053|26|NZ_CP006003|CRT matches to NZ_CP022799 (Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.808

gccggcgtcgtagccgaagccgcccg	CRISPR spacer
cccggcatcgtggccgaagccgccga	Protospacer
 *****.****.************ .

160. spacer 12.6|2956053|26|NZ_CP006003|CRT matches to NZ_CP032695 (Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence) position: , mismatch: 5, identity: 0.808

gccggcgtcgtagccgaagccgcccg	CRISPR spacer
catggcgtcgtagccgtaggcgcccg	Protospacer
  .************* ** ******

161. spacer 12.6|2956053|26|NZ_CP006003|CRT matches to NZ_CP021811 (Sinorhizobium meliloti strain Rm41 plasmid accessoryA, complete sequence) position: , mismatch: 5, identity: 0.808

gccggcgtcgtagccgaagccgcccg	CRISPR spacer
gccgccgtcgtagccgaagcggcaga	Protospacer
**** *************** **  .

162. spacer 12.6|2956053|26|NZ_CP006003|CRT matches to NC_018682 (Sinorhizobium meliloti Rm41 plasmid pRM41A, complete sequence) position: , mismatch: 5, identity: 0.808

gccggcgtcgtagccgaagccgcccg	CRISPR spacer
gccgccgtcgtagccgaagcggcaga	Protospacer
**** *************** **  .

163. spacer 16.1|3877979|27|NZ_CP006003|CRISPRCasFinder matches to NZ_CP006368 (Aureimonas sp. AU20 plasmid pAU20a, complete sequence) position: , mismatch: 5, identity: 0.815

tggcgccgcggcgccttccggacgagc	CRISPR spacer
cagcgccgcgtcgccttcctgacgaac	Protospacer
..******** ******** *****.*

164. spacer 30.14|10348550|32|NZ_CP006003|CRISPRCasFinder,CRT matches to NC_048768 (Gordonia phage Chelms, complete genome) position: , mismatch: 5, identity: 0.844

caggccgagcgcgacgagcgcaagg-cagcgac	CRISPR spacer
caggccgagcgcgtcgagcgcaagatcgacga-	Protospacer
************* **********. *..***

165. spacer 30.14|10348550|32|NZ_CP006003|CRISPRCasFinder,CRT matches to NZ_CP031193 (Humibacter sp. BT305 plasmid unnamed1) position: , mismatch: 5, identity: 0.844

caggccgagcgcgacgagcgcaag-gcagcgac	CRISPR spacer
aaggccgagcgcgacgagcgcgagcgccgcgt-	Protospacer
 ********************.** ** ***

166. spacer 12.2|2955828|26|NZ_CP006003|CRT matches to NZ_CP013415 (Burkholderia ubonensis strain MSMB2035 plasmid pMSMB2035, complete sequence) position: , mismatch: 6, identity: 0.769

ggcggcgtcgtagccgaaggcgtccg	CRISPR spacer
ggcggcgtcgtagccgaatgccgtaa	Protospacer
****************** **  . .

167. spacer 12.4|2955942|29|NZ_CP006003|CRT matches to NZ_CP010870 (Confluentimicrobium sp. EMB200-NS6 strain EMBL200_NS6 plasmid pNS6001, complete sequence) position: , mismatch: 6, identity: 0.793

ctcgggacccgcacccatggcgatggcac	CRISPR spacer
ggcgtcacccgcgcccatggcgatggcgc	Protospacer
  **  ******.**************.*

168. spacer 12.6|2956053|26|NZ_CP006003|CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 6, identity: 0.769

gccggcgtcgtagccgaagccgcccg	CRISPR spacer
ctgcgcgtcgtagccgacgccgccca	Protospacer
 .  ************* *******.

169. spacer 12.6|2956053|26|NZ_CP006003|CRT matches to NZ_CP029357 (Azospirillum sp. CFH 70021 plasmid unnamed2) position: , mismatch: 6, identity: 0.769

gccggcgtcgtagccgaagccgcccg	CRISPR spacer
cccgccgtcgtagccgaagccgaggc	Protospacer
 *** *****************

170. spacer 12.6|2956053|26|NZ_CP006003|CRT matches to NC_011881 (Pseudarthrobacter chlorophenolicus A6 plasmid pACHL02, complete sequence) position: , mismatch: 6, identity: 0.769

gccggcgtcgtagccgaagccgcccg	CRISPR spacer
gccggcgtcgtagcggaagccaaagc	Protospacer
************** ******.

171. spacer 15.1|3422619|31|NZ_CP006003|CRISPRCasFinder matches to NC_013855 (Azospirillum sp. B510 plasmid pAB510a, complete sequence) position: , mismatch: 6, identity: 0.806

gaggcgccggtgaggcgcggcagggtgacgt	CRISPR spacer
gcggcgccggtcaggcgcggcagggtttccg	Protospacer
* ********* **************  *

172. spacer 15.1|3422619|31|NZ_CP006003|CRISPRCasFinder matches to NZ_CP020040 (Streptomyces sp. 3211 isolate 3 plasmid p3211-1, complete sequence) position: , mismatch: 6, identity: 0.806

gaggcgccggtgaggcgcggcagggtgacgt	CRISPR spacer
aaggcgccggcgaagcgcggcagggtaccgg	Protospacer
.*********.**.************. **

173. spacer 15.1|3422619|31|NZ_CP006003|CRISPRCasFinder matches to NZ_CP020372 (Candidatus Thiodictyon syntrophicum strain Cad16T plasmid pTs485, complete sequence) position: , mismatch: 6, identity: 0.806

gaggcgccggtgaggcgcggcagggtgacgt-	CRISPR spacer
gaggcgccggtggggcgcggc-gggcagcgct	Protospacer
************.******** ***...**.

174. spacer 15.1|3422619|31|NZ_CP006003|CRISPRCasFinder matches to NZ_CP013513 (Rhizobium sp. N1314 plasmid pRspN1314b, complete sequence) position: , mismatch: 6, identity: 0.806

gaggcgccg--gtgaggcgcggcagggtgacgt	CRISPR spacer
--gttggcgatgtgaggcgcggcagggtgtcgt	Protospacer
  * .* **  ****************** ***

175. spacer 15.1|3422619|31|NZ_CP006003|CRISPRCasFinder matches to NZ_CP054621 (Azospirillum oryzae strain KACC 14407 plasmid unnamed6, complete sequence) position: , mismatch: 6, identity: 0.806

gaggcgccggtgaggcgcggca-gggtgacgt	CRISPR spacer
gaggcgcgggtgaggcgcggcatcggctatg-	Protospacer
******* **************  **. *.*

176. spacer 15.1|3422619|31|NZ_CP006003|CRISPRCasFinder matches to NZ_CP013603 (Rhizobium sp. N731 plasmid pRspN731b, complete sequence) position: , mismatch: 6, identity: 0.806

gaggcgccg--gtgaggcgcggcagggtgacgt	CRISPR spacer
--gttggcgatgtgaggcgcggcagggtgtcgt	Protospacer
  * .* **  ****************** ***

177. spacer 16.1|3877979|27|NZ_CP006003|CRISPRCasFinder matches to CP021183 (Sphingomonas wittichii DC-6 plasmid pDC02, complete sequence) position: , mismatch: 6, identity: 0.778

tggcgccgcggcgccttccggacgagc	CRISPR spacer
atcggccccggcgccttgcggacgagc	Protospacer
    *** ********* *********

178. spacer 16.1|3877979|27|NZ_CP006003|CRISPRCasFinder matches to NZ_CP030074 (Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.778

tggcgccgcggcgccttccggacgagc	CRISPR spacer
aggcgccgcagcgcctgccggacggta	Protospacer
 ********.****** *******.

179. spacer 30.3|10347767|36|NZ_CP006003|CRISPRCasFinder,CRT matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 6, identity: 0.833

tcgaaggggccgcgaagctcgccgctgcggcgctcg	CRISPR spacer
tcgccgtcgccgcgacgctcgccgccgcggcgctcg	Protospacer
***  *  ******* *********.**********

180. spacer 30.14|10348550|32|NZ_CP006003|CRISPRCasFinder,CRT matches to MT986029 (Gordonia phage Linetti, complete genome) position: , mismatch: 6, identity: 0.812

caggccgagcgcgacgagcgcaagg-cagcgac	CRISPR spacer
caggccgagcgtgtcgagcgcaagatcgacga-	Protospacer
***********.* **********. *..***

181. spacer 30.75|10348550|33|NZ_CP006003|PILER-CR matches to NC_048768 (Gordonia phage Chelms, complete genome) position: , mismatch: 6, identity: 0.818

ccaggccgagcgcgacgagcgcaagg-cagcgac	CRISPR spacer
gcaggccgagcgcgtcgagcgcaagatcgacga-	Protospacer
 ************* **********. *..***

182. spacer 31.3|11010288|30|NZ_CP006003|CRISPRCasFinder matches to NC_013858 (Azospirillum sp. B510 plasmid pAB510d, complete sequence) position: , mismatch: 6, identity: 0.8

cgggtggacgcccccgcacgcgggtctcct	CRISPR spacer
ctgatggacgcccccgcacgcggctcacgc	Protospacer
* *.******************* ** * .

183. spacer 13.1|3422193|34|NZ_CP006003|CRISPRCasFinder matches to NZ_CP043960 (Streptomyces tendae strain 139 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.794

gagaccttgacgctgcccccctcgacgctggccg---	CRISPR spacer
tggaccttgacgccgcccccgtcgac---ggccgtgc	Protospacer
 .***********.****** *****   *****

184. spacer 15.1|3422619|31|NZ_CP006003|CRISPRCasFinder matches to NZ_CP018096 (Chelatococcus daeguensis strain TAD1 plasmid pTAD1, complete sequence) position: , mismatch: 7, identity: 0.774

gaggcgccggtgaggcgcggcagggtgacgt	CRISPR spacer
caggcgccgaggaggcgcggcaggtcgccga	Protospacer
 ********. ************* .* **

185. spacer 15.1|3422619|31|NZ_CP006003|CRISPRCasFinder matches to NZ_CP024587 (Roseomonas sp. FDAARGOS_362 plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.774

gaggcgccggtgaggcgcggcagggtgacgt	CRISPR spacer
tgggcggcggtgaggcgaggcagggcagcgt	Protospacer
 .**** ********** *******...***

186. spacer 30.6|10347984|32|NZ_CP006003|CRISPRCasFinder,CRT matches to NC_047851 (Brevibacterium phage LuckyBarnes, complete genome) position: , mismatch: 7, identity: 0.781

gtgccggcgacccagtcgccctggt-acgccga	CRISPR spacer
ccgccgccgaccgagtcgccctggtcacgctt-	Protospacer
 .**** ***** ************ ****.

187. spacer 30.9|10348195|34|NZ_CP006003|CRISPRCasFinder,CRT matches to NZ_CP031752 (Rhodobacter sphaeroides strain EBL0706 plasmid p.A, complete sequence) position: , mismatch: 7, identity: 0.794

ggctccagccgcgcggcgtaggcctggaccatct	CRISPR spacer
aggcgcagccgcgcggcgtaggccgagaccatca	Protospacer
.* . ******************* .*******

188. spacer 30.9|10348195|34|NZ_CP006003|CRISPRCasFinder,CRT matches to NZ_CP031752 (Rhodobacter sphaeroides strain EBL0706 plasmid p.A, complete sequence) position: , mismatch: 7, identity: 0.794

ggctccagccgcgcggcgtaggcctggaccatct	CRISPR spacer
aggcgcagccgcgcggcgtaggccgagaccatca	Protospacer
.* . ******************* .*******

189. spacer 30.9|10348195|34|NZ_CP006003|CRISPRCasFinder,CRT matches to NZ_CP034782 (Pseudomonas sp. MPC6 plasmid pMPC6-328K, complete sequence) position: , mismatch: 7, identity: 0.794

ggctc---cagccgcgcggcgtaggcctggaccatct	CRISPR spacer
---tcgagcagctgcgccgcgtaggcctggaccagtt	Protospacer
   **   ****.**** **************** .*

190. spacer 30.14|10348550|32|NZ_CP006003|CRISPRCasFinder,CRT matches to NZ_CP032326 (Azospirillum brasilense strain MTCC4035 plasmid p5, complete sequence) position: , mismatch: 7, identity: 0.781

caggccgagcgcgacgagcgcaaggcagcgac----	CRISPR spacer
caggccgagcgcgaccagggca----agcggcctgg	Protospacer
*************** ** ***    ****.*

191. spacer 30.14|10348550|32|NZ_CP006003|CRISPRCasFinder,CRT matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

caggccgagcgcgacgagcgcaaggcagcgac--	CRISPR spacer
aaggccgaggccgacgagcgcaagg--gtcactc	Protospacer
 ********  **************  *. **

192. spacer 30.14|10348550|32|NZ_CP006003|CRISPRCasFinder,CRT matches to NZ_CP020900 (Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRphaBra5d, complete sequence) position: , mismatch: 7, identity: 0.781

caggccgagcgcgacgagcgcaagg----cagcgac	CRISPR spacer
caggccgagcgcgccgagcggaatgagcacag----	Protospacer
************* ****** ** *    ***

193. spacer 30.14|10348550|32|NZ_CP006003|CRISPRCasFinder,CRT matches to NZ_CP013526 (Rhizobium phaseoli strain R744 plasmid pRphaR744d, complete sequence) position: , mismatch: 7, identity: 0.781

caggccgagcgcgacgagcgcaa--ggcagcgac	CRISPR spacer
caggccgagcgcgccgagcggaatgagcacgg--	Protospacer
************* ****** **  .***  *

194. spacer 30.14|10348550|32|NZ_CP006003|CRISPRCasFinder,CRT matches to NZ_CP013556 (Rhizobium phaseoli strain N931 plasmid pRphaN931d, complete sequence) position: , mismatch: 7, identity: 0.781

caggccgagcgcgacgagcgcaa--ggcagcgac	CRISPR spacer
caggccgagcgcgccgagcggaatgagcacgg--	Protospacer
************* ****** **  .***  *

195. spacer 30.14|10348550|32|NZ_CP006003|CRISPRCasFinder,CRT matches to NZ_CP013562 (Rhizobium phaseoli strain N841 plasmid pRphaN841e, complete sequence) position: , mismatch: 7, identity: 0.781

caggccgagcgcgacgagcgcaa--ggcagcgac	CRISPR spacer
caggccgagcgcgccgagcggaatgagcacgg--	Protospacer
************* ****** **  .***  *

196. spacer 30.14|10348550|32|NZ_CP006003|CRISPRCasFinder,CRT matches to NZ_CP013531 (Rhizobium phaseoli strain R723 plasmid pRphaR723d, complete sequence) position: , mismatch: 7, identity: 0.781

caggccgagcgcgacgagcgcaa--ggcagcgac	CRISPR spacer
caggccgagcgcgccgagcggaatgagcacgg--	Protospacer
************* ****** **  .***  *

197. spacer 30.14|10348550|32|NZ_CP006003|CRISPRCasFinder,CRT matches to NZ_CP013536 (Rhizobium phaseoli strain R650 plasmid pRphaR650d, complete sequence) position: , mismatch: 7, identity: 0.781

caggccgagcgcgacgagcgcaa--ggcagcgac	CRISPR spacer
caggccgagcgcgccgagcggaatgagcacgg--	Protospacer
************* ****** **  .***  *

198. spacer 30.14|10348550|32|NZ_CP006003|CRISPRCasFinder,CRT matches to NZ_CP013567 (Rhizobium phaseoli strain N831 plasmid pRphaN831d, complete sequence) position: , mismatch: 7, identity: 0.781

caggccgagcgcgacgagcgcaa--ggcagcgac	CRISPR spacer
caggccgagcgcgccgagcggaatgagcacgg--	Protospacer
************* ****** **  .***  *

199. spacer 30.14|10348550|32|NZ_CP006003|CRISPRCasFinder,CRT matches to NZ_CP013584 (Rhizobium phaseoli strain N261 plasmid pRphaN261d, complete sequence) position: , mismatch: 7, identity: 0.781

caggccgagcgcgacgagcgcaa--ggcagcgac	CRISPR spacer
caggccgagcgcgccgagcggaatgagcacgg--	Protospacer
************* ****** **  .***  *

200. spacer 30.14|10348550|32|NZ_CP006003|CRISPRCasFinder,CRT matches to NC_010997 (Rhizobium etli CIAT 652 plasmid pC, complete sequence) position: , mismatch: 7, identity: 0.781

caggccgagcgcgacgagcgcaa--ggcagcgac	CRISPR spacer
caggccgagcgcgccgagcggaatgagcacgg--	Protospacer
************* ****** **  .***  *

201. spacer 30.14|10348550|32|NZ_CP006003|CRISPRCasFinder,CRT matches to NZ_CP043439 (Cupriavidus campinensis strain MJ1 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781

caggccgagcgcgacgagcgcaaggcagcgac-	CRISPR spacer
atcgccgagcgcgacaagctcaaggc-gcaact	Protospacer
   ************.*** ****** **.**

202. spacer 30.14|10348550|32|NZ_CP006003|CRISPRCasFinder,CRT matches to MK524490 (Mycobacterium phage Donny, complete genome) position: , mismatch: 7, identity: 0.781

caggccgagcgcgacgagcgcaaggcagcgac	CRISPR spacer
cgcgccgagcgcgccgagcgcaacgccgaggc	Protospacer
*. ********** ********* ** * *.*

203. spacer 30.14|10348550|32|NZ_CP006003|CRISPRCasFinder,CRT matches to MT889381 (Mycobacterium phage Suigeneris, complete genome) position: , mismatch: 7, identity: 0.781

caggccgagcgcgacgagcgcaaggcagcgac	CRISPR spacer
cgcgccgagcgcgccgagcgcaacgccgaggc	Protospacer
*. ********** ********* ** * *.*

204. spacer 30.15|10348619|33|NZ_CP006003|CRISPRCasFinder,CRT matches to NZ_AP022333 (Methylosinus sp. C49 isolate Methylosinus sp. C49 plasmid pMSC49a, complete sequence) position: , mismatch: 7, identity: 0.788

cgtgtgcatcaaggggctcgacatcccgcgctt	CRISPR spacer
tgtcgccgtcgagggcctcgacatcccgcgctt	Protospacer
.**   *.**.**** *****************

205. spacer 30.21|10349043|34|NZ_CP006003|CRISPRCasFinder,CRT matches to NZ_CP054613 (Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence) position: , mismatch: 7, identity: 0.794

cgacgaactcggtgacatctacttcctcaccgac	CRISPR spacer
caacaacttcggtgtcatctacttcctgaccgaa	Protospacer
*.**.* .****** ************ *****

206. spacer 30.35|10350033|31|NZ_CP006003|CRISPRCasFinder,CRT matches to NZ_CP015203 (Rhodococcus sp. 008 plasmid pR8L1, complete sequence) position: , mismatch: 7, identity: 0.774

gagggccgaagatggcccacccccgatacgt	CRISPR spacer
gcaggccgaagatggctcaccaccgaatcga	Protospacer
* .*************.**** ****  **

207. spacer 30.44|10350669|33|NZ_CP006003|CRISPRCasFinder,CRT,PILER-CR matches to NC_013855 (Azospirillum sp. B510 plasmid pAB510a, complete sequence) position: , mismatch: 7, identity: 0.788

ggggccccggcgcggagcttccggagcagcgtc	CRISPR spacer
gcgtgaccggcgcggagctgccggagctgcggc	Protospacer
* *   ************* ******* *** *

208. spacer 30.70|10348195|35|NZ_CP006003|PILER-CR matches to NZ_CP031752 (Rhodobacter sphaeroides strain EBL0706 plasmid p.A, complete sequence) position: , mismatch: 7, identity: 0.8

cggctccagccgcgcggcgtaggcctggaccatct	CRISPR spacer
caggcgcagccgcgcggcgtaggccgagaccatca	Protospacer
*.* . ******************* .*******

209. spacer 30.70|10348195|35|NZ_CP006003|PILER-CR matches to NZ_CP031752 (Rhodobacter sphaeroides strain EBL0706 plasmid p.A, complete sequence) position: , mismatch: 7, identity: 0.8

cggctccagccgcgcggcgtaggcctggaccatct	CRISPR spacer
caggcgcagccgcgcggcgtaggccgagaccatca	Protospacer
*.* . ******************* .*******

210. spacer 30.70|10348195|35|NZ_CP006003|PILER-CR matches to NZ_CP034782 (Pseudomonas sp. MPC6 plasmid pMPC6-328K, complete sequence) position: , mismatch: 7, identity: 0.8

cggctc---cagccgcgcggcgtaggcctggaccatct	CRISPR spacer
---ctcgagcagctgcgccgcgtaggcctggaccagtt	Protospacer
   ***   ****.**** **************** .*

211. spacer 30.75|10348550|33|NZ_CP006003|PILER-CR matches to NZ_CP013526 (Rhizobium phaseoli strain R744 plasmid pRphaR744d, complete sequence) position: , mismatch: 7, identity: 0.788

ccaggccgagcgcgacgagcgcaa--ggcagcgac	CRISPR spacer
ccaggccgagcgcgccgagcggaatgagcacgg--	Protospacer
************** ****** **  .***  *

212. spacer 30.75|10348550|33|NZ_CP006003|PILER-CR matches to NZ_CP013556 (Rhizobium phaseoli strain N931 plasmid pRphaN931d, complete sequence) position: , mismatch: 7, identity: 0.788

ccaggccgagcgcgacgagcgcaa--ggcagcgac	CRISPR spacer
ccaggccgagcgcgccgagcggaatgagcacgg--	Protospacer
************** ****** **  .***  *

213. spacer 30.75|10348550|33|NZ_CP006003|PILER-CR matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.788

ccaggccgagcgcgacgagcgcaaggcagcgac--	CRISPR spacer
caaggccgaggccgacgagcgcaagg--gtcactc	Protospacer
* ********  **************  *. **

214. spacer 30.75|10348550|33|NZ_CP006003|PILER-CR matches to NZ_CP013562 (Rhizobium phaseoli strain N841 plasmid pRphaN841e, complete sequence) position: , mismatch: 7, identity: 0.788

ccaggccgagcgcgacgagcgcaa--ggcagcgac	CRISPR spacer
ccaggccgagcgcgccgagcggaatgagcacgg--	Protospacer
************** ****** **  .***  *

215. spacer 30.75|10348550|33|NZ_CP006003|PILER-CR matches to NZ_CP013531 (Rhizobium phaseoli strain R723 plasmid pRphaR723d, complete sequence) position: , mismatch: 7, identity: 0.788

ccaggccgagcgcgacgagcgcaa--ggcagcgac	CRISPR spacer
ccaggccgagcgcgccgagcggaatgagcacgg--	Protospacer
************** ****** **  .***  *

216. spacer 30.75|10348550|33|NZ_CP006003|PILER-CR matches to NZ_CP013567 (Rhizobium phaseoli strain N831 plasmid pRphaN831d, complete sequence) position: , mismatch: 7, identity: 0.788

ccaggccgagcgcgacgagcgcaa--ggcagcgac	CRISPR spacer
ccaggccgagcgcgccgagcggaatgagcacgg--	Protospacer
************** ****** **  .***  *

217. spacer 30.75|10348550|33|NZ_CP006003|PILER-CR matches to NZ_CP013584 (Rhizobium phaseoli strain N261 plasmid pRphaN261d, complete sequence) position: , mismatch: 7, identity: 0.788

ccaggccgagcgcgacgagcgcaa--ggcagcgac	CRISPR spacer
ccaggccgagcgcgccgagcggaatgagcacgg--	Protospacer
************** ****** **  .***  *

218. spacer 30.75|10348550|33|NZ_CP006003|PILER-CR matches to NC_010997 (Rhizobium etli CIAT 652 plasmid pC, complete sequence) position: , mismatch: 7, identity: 0.788

ccaggccgagcgcgacgagcgcaa--ggcagcgac	CRISPR spacer
ccaggccgagcgcgccgagcggaatgagcacgg--	Protospacer
************** ****** **  .***  *

219. spacer 30.75|10348550|33|NZ_CP006003|PILER-CR matches to MT986029 (Gordonia phage Linetti, complete genome) position: , mismatch: 7, identity: 0.788

ccaggccgagcgcgacgagcgcaagg-cagcgac	CRISPR spacer
gcaggccgagcgtgtcgagcgcaagatcgacga-	Protospacer
 ***********.* **********. *..***

220. spacer 30.75|10348550|33|NZ_CP006003|PILER-CR matches to NZ_CP020900 (Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRphaBra5d, complete sequence) position: , mismatch: 7, identity: 0.788

ccaggccgagcgcgacgagcgcaagg----cagcgac	CRISPR spacer
ccaggccgagcgcgccgagcggaatgagcacag----	Protospacer
************** ****** ** *    ***

221. spacer 30.75|10348550|33|NZ_CP006003|PILER-CR matches to NZ_CP013536 (Rhizobium phaseoli strain R650 plasmid pRphaR650d, complete sequence) position: , mismatch: 7, identity: 0.788

ccaggccgagcgcgacgagcgcaa--ggcagcgac	CRISPR spacer
ccaggccgagcgcgccgagcggaatgagcacgg--	Protospacer
************** ****** **  .***  *

222. spacer 2.1|244182|30|NZ_CP006003|CRISPRCasFinder matches to NZ_CP020399 (Burkholderia multivorans strain FDAARGOS_246 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.733

aacatcatcgcgctggagccctcgacggga	CRISPR spacer
tccgacatcgcgctggggccgtcgacggcc	Protospacer
  *. ***********.*** *******

223. spacer 12.4|2955942|29|NZ_CP006003|CRT matches to NC_021289 (Burkholderia insecticola plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.724

ctcgggacccgcacccatggcgatggcac	CRISPR spacer
cggcaagcccgcacccatgacgatggcat	Protospacer
*   ...************.********.

224. spacer 12.4|2955942|29|NZ_CP006003|CRT matches to NZ_CP018078 (Sulfitobacter sp. AM1-D1 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.724

ctcgggacccgcacccatggcgatggcac	CRISPR spacer
tagaggacccgcaaccaaggcgatggccg	Protospacer
.  .********* *** *********

225. spacer 15.1|3422619|31|NZ_CP006003|CRISPRCasFinder matches to NZ_CP054023 (Rhizobium sp. JKLM12A2 plasmid pPR12A202, complete sequence) position: , mismatch: 8, identity: 0.742

gaggcgccggtgaggcgcggcagggtgacgt	CRISPR spacer
caggcgccgtagaggcgcggcaggccgatca	Protospacer
 ********  ************* .**.

226. spacer 15.1|3422619|31|NZ_CP006003|CRISPRCasFinder matches to NZ_CP021032 (Rhizobium sp. NXC14 plasmid pRspNXC14b, complete sequence) position: , mismatch: 8, identity: 0.742

gaggcgccggtgaggcgcggcagggtgacgt	CRISPR spacer
caggcgccgtagaggcgcggcaggccgatca	Protospacer
 ********  ************* .**.

227. spacer 15.1|3422619|31|NZ_CP006003|CRISPRCasFinder matches to NZ_CP015867 (Streptomyces parvulus strain 2297 plasmid pSPA1, complete sequence) position: , mismatch: 8, identity: 0.742

gaggcgccggtgaggcgcggcagggtgacgt	CRISPR spacer
ccggcgcgggcgaggcgcggcagggacaggg	Protospacer
  ***** **.**************  * *

228. spacer 15.1|3422619|31|NZ_CP006003|CRISPRCasFinder matches to NZ_CP020899 (Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRphaBra5c, complete sequence) position: , mismatch: 8, identity: 0.742

gaggcgccggtgaggcgcggcagggtgacgt	CRISPR spacer
caggcgccgtagaggcgcggcaggccgatca	Protospacer
 ********  ************* .**.

229. spacer 15.1|3422619|31|NZ_CP006003|CRISPRCasFinder matches to NC_007765 (Rhizobium etli CFN 42 plasmid p42e, complete sequence) position: , mismatch: 8, identity: 0.742

gaggcgccggtgaggcgcggcagggtgacgt	CRISPR spacer
caggcgccgtagaggcgcggcaggccgatca	Protospacer
 ********  ************* .**.

230. spacer 15.1|3422619|31|NZ_CP006003|CRISPRCasFinder matches to NZ_CP021028 (Rhizobium sp. TAL182 plasmid pRetTAL182d, complete sequence) position: , mismatch: 8, identity: 0.742

gaggcgccggtgaggcgcggcagggtgacgt	CRISPR spacer
caggcgccgtagaggcgcggcaggccgatca	Protospacer
 ********  ************* .**.

231. spacer 15.1|3422619|31|NZ_CP006003|CRISPRCasFinder matches to NZ_CP020909 (Rhizobium etli strain NXC12 plasmid pRetNXC12c, complete sequence) position: , mismatch: 8, identity: 0.742

gaggcgccggtgaggcgcggcagggtgacgt	CRISPR spacer
caggcgccgtagaggcgcggcaggccgatca	Protospacer
 ********  ************* .**.

232. spacer 15.1|3422619|31|NZ_CP006003|CRISPRCasFinder matches to NZ_CP020951 (Rhizobium sp. CIAT894 plasmid pRheCIAT894d, complete sequence) position: , mismatch: 8, identity: 0.742

gaggcgccggtgaggcgcggcagggtgacgt	CRISPR spacer
caggcgccgtagaggcgcggcaggccgatca	Protospacer
 ********  ************* .**.

233. spacer 15.1|3422619|31|NZ_CP006003|CRISPRCasFinder matches to NZ_CP018230 (Rhizobium leguminosarum strain Vaf-108 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.742

gaggcgccggtgaggcgcggcagggtgacgt	CRISPR spacer
caggcgccgtagaggcgcggcaggccgatca	Protospacer
 ********  ************* .**.

234. spacer 15.1|3422619|31|NZ_CP006003|CRISPRCasFinder matches to NZ_CP025508 (Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvB, complete sequence) position: , mismatch: 8, identity: 0.742

gaggcgccggtgaggcgcggcagggtgacgt	CRISPR spacer
caggcgccgtagaggcgcggcaggccgatca	Protospacer
 ********  ************* .**.

235. spacer 15.1|3422619|31|NZ_CP006003|CRISPRCasFinder matches to NZ_CP013529 (Rhizobium phaseoli strain R723 plasmid pRphaR723b, complete sequence) position: , mismatch: 8, identity: 0.742

gaggcgccggtgaggcgcggcagggtgacgt	CRISPR spacer
caggcgccgtagaggcgcggcaggccgatca	Protospacer
 ********  ************* .**.

236. spacer 15.1|3422619|31|NZ_CP006003|CRISPRCasFinder matches to NC_011366 (Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG202, complete sequence) position: , mismatch: 8, identity: 0.742

gaggcgccggtgaggcgcggcagggtgacgt	CRISPR spacer
caggcgccgtagaggcgcggcaggccgatca	Protospacer
 ********  ************* .**.

237. spacer 15.1|3422619|31|NZ_CP006003|CRISPRCasFinder matches to NC_021908 (Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1d, complete sequence) position: , mismatch: 8, identity: 0.742

gaggcgccggtgaggcgcggcagggtgacgt	CRISPR spacer
caggcgccgtagaggcgcggcaggccgatca	Protospacer
 ********  ************* .**.

238. spacer 15.1|3422619|31|NZ_CP006003|CRISPRCasFinder matches to NZ_CP013582 (Rhizobium phaseoli strain N261 plasmid pRphaN261b, complete sequence) position: , mismatch: 8, identity: 0.742

gaggcgccggtgaggcgcggcagggtgacgt	CRISPR spacer
caggcgccgtagaggcgcggcaggccgatca	Protospacer
 ********  ************* .**.

239. spacer 15.1|3422619|31|NZ_CP006003|CRISPRCasFinder matches to NZ_CP013516 (Rhizobium sp. N1314 plasmid pRspN1314e, complete sequence) position: , mismatch: 8, identity: 0.742

gaggcgccggtgaggcgcggcagggtgacgt	CRISPR spacer
caggcgccgtagaggcgcggcaggccgatca	Protospacer
 ********  ************* .**.

240. spacer 15.1|3422619|31|NZ_CP006003|CRISPRCasFinder matches to NZ_CP054029 (Rhizobium sp. JKLM19E plasmid pPR19E02, complete sequence) position: , mismatch: 8, identity: 0.742

gaggcgccggtgaggcgcggcagggtgacgt	CRISPR spacer
caggcgccgtagaggcgcggcaggccgatca	Protospacer
 ********  ************* .**.

241. spacer 15.1|3422619|31|NZ_CP006003|CRISPRCasFinder matches to NZ_CP033582 (Streptomyces sp. ADI95-16 plasmid pADI95-16a, complete sequence) position: , mismatch: 8, identity: 0.742

gaggcgccggtgaggcgcggcagggtgacgt	CRISPR spacer
aggacgccggtgaggcgctccagggtggccc	Protospacer
..*.**************  *******.* .

242. spacer 15.1|3422619|31|NZ_CP006003|CRISPRCasFinder matches to NZ_CP023068 (Ensifer sojae CCBAU 05684 plasmid pSJ05684b, complete sequence) position: , mismatch: 8, identity: 0.742

gaggcgccggtgaggcgcggcagggtgacgt	CRISPR spacer
caggcgccgtagaggcgcggcaggccgatca	Protospacer
 ********  ************* .**.

243. spacer 15.1|3422619|31|NZ_CP006003|CRISPRCasFinder matches to NZ_CP022667 (Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR2, complete sequence) position: , mismatch: 8, identity: 0.742

gaggcgccggtgaggcgcggcagggtgacgt	CRISPR spacer
caggcgccgtagaggcgcggcaggccgatca	Protospacer
 ********  ************* .**.

244. spacer 15.1|3422619|31|NZ_CP006003|CRISPRCasFinder matches to NZ_CP021082 (Deinococcus ficus strain CC-FR2-10 plasmid pDFI1, complete sequence) position: , mismatch: 8, identity: 0.742

gaggcgccggtgaggcgcggcagggtgacgt	CRISPR spacer
ctgcgggcggtggggcgcggcagggtgccgc	Protospacer
  *  * *****.************** **.

245. spacer 15.1|3422619|31|NZ_CP006003|CRISPRCasFinder matches to NZ_CP035001 (Rhizobium acidisoli strain FH23 plasmid pRapFH23c, complete sequence) position: , mismatch: 8, identity: 0.742

gaggcgccggtgaggcgcggcagggtgacgt	CRISPR spacer
caggcgccgtagaggcgcggcaggccgatca	Protospacer
 ********  ************* .**.

246. spacer 15.1|3422619|31|NZ_CP006003|CRISPRCasFinder matches to NZ_CP050087 (Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b5, complete sequence) position: , mismatch: 8, identity: 0.742

gaggcgccggtgaggcgcggcagggtgacgt	CRISPR spacer
caggcgccgtagaggcgcggcaggccgatca	Protospacer
 ********  ************* .**.

247. spacer 18.1|4356366|35|NZ_CP006003|CRISPRCasFinder matches to MT771346 (Gordonia phage MichaelScott, complete genome) position: , mismatch: 8, identity: 0.771

-aggtttgaacgcggcgaagatgcgcgcgtggaggg	CRISPR spacer
caggcccg-acgcggcgaagaggcgcgcgtcgagca	Protospacer
 ***...* ************ ******** *** .

248. spacer 18.1|4356366|35|NZ_CP006003|CRISPRCasFinder matches to MH155867 (Gordonia phage Easley, complete genome) position: , mismatch: 8, identity: 0.771

-aggtttgaacgcggcgaagatgcgcgcgtggaggg	CRISPR spacer
caggcccg-acgcggcgaagaggcgcgcgtcgagca	Protospacer
 ***...* ************ ******** *** .

249. spacer 18.1|4356366|35|NZ_CP006003|CRISPRCasFinder matches to MK801729 (Gordonia phage Clark, complete genome) position: , mismatch: 8, identity: 0.771

-aggtttgaacgcggcgaagatgcgcgcgtggaggg	CRISPR spacer
caggcccg-acgcggcgaagaggcgcgcgtcgagca	Protospacer
 ***...* ************ ******** *** .

250. spacer 18.1|4356366|35|NZ_CP006003|CRISPRCasFinder matches to MG845393 (Gordonia phage Beenie, complete genome) position: , mismatch: 8, identity: 0.771

-aggtttgaacgcggcgaagatgcgcgcgtggaggg	CRISPR spacer
caggcccg-acgcggcgaagaggcgcgcgtcgagca	Protospacer
 ***...* ************ ******** *** .

251. spacer 25.1|8885518|31|NZ_CP006003|CRISPRCasFinder matches to NZ_CP018784 (Curtobacterium pusillum strain AA3 plasmid pCPAA3, complete sequence) position: , mismatch: 8, identity: 0.742

caactcctcttcggagccgaggcgcaccacc	CRISPR spacer
catctcctcttcgaagccgaggccgtcgaag	Protospacer
** **********.*********   * *

252. spacer 30.6|10347984|32|NZ_CP006003|CRISPRCasFinder,CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 8, identity: 0.75

gtgccggcgacccagtcgccctggtacgccga	CRISPR spacer
gtgacggcgatccagtcgccctgtcccagtga	Protospacer
*** ******.************ . *. .**

253. spacer 30.8|10348124|34|NZ_CP006003|CRISPRCasFinder,CRT matches to NZ_CP011515 (Mitsuaria sp. 7 plasmid, complete sequence) position: , mismatch: 8, identity: 0.765

tcgcgcgcctcgcctccccagttg---agtccgagca	CRISPR spacer
tcgagcgcctcgccgccccagttggacaacccgc---	Protospacer
*** ********** *********   *..***

254. spacer 30.12|10348411|32|NZ_CP006003|CRISPRCasFinder,CRT matches to NC_008269 (Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence) position: , mismatch: 8, identity: 0.75

caaatc--caaccggctaaccgccactcgcccat	CRISPR spacer
--aaccggcaaccggctgaccgccactagcctgc	Protospacer
  **.*  *********.********* ***...

255. spacer 30.14|10348550|32|NZ_CP006003|CRISPRCasFinder,CRT matches to MT897910 (Mycobacterium phage VioletZ, complete genome) position: , mismatch: 8, identity: 0.75

caggccgagcgcgacgagcgcaaggcagcgac	CRISPR spacer
actgccgagcgcgccgagcgcaaggccgacgc	Protospacer
   ********** ************ *  .*

256. spacer 30.14|10348550|32|NZ_CP006003|CRISPRCasFinder,CRT matches to MN369759 (Mycobacterium phage Mithril, complete genome) position: , mismatch: 8, identity: 0.75

caggccgagcgcgacgagcgcaaggcagcgac	CRISPR spacer
actgccgagcgcgccgagcgcaaggccgacgc	Protospacer
   ********** ************ *  .*

257. spacer 30.14|10348550|32|NZ_CP006003|CRISPRCasFinder,CRT matches to MT818419 (Mycobacterium phage Lolalove, complete genome) position: , mismatch: 8, identity: 0.75

caggccgagcgcgacgagcgcaaggcagcgac	CRISPR spacer
actgccgagcgcgccgagcgcaaggccgacgc	Protospacer
   ********** ************ *  .*

258. spacer 30.14|10348550|32|NZ_CP006003|CRISPRCasFinder,CRT matches to MK524486 (Mycobacterium phage Waleliano, complete genome) position: , mismatch: 8, identity: 0.75

caggccgagcgcgacgagcgcaaggcagcgac	CRISPR spacer
actgccgagcgcgccgagcgcaaggccgacgc	Protospacer
   ********** ************ *  .*

259. spacer 30.14|10348550|32|NZ_CP006003|CRISPRCasFinder,CRT matches to MH513970 (Mycobacterium phage Hangman, complete genome) position: , mismatch: 8, identity: 0.75

caggccgagcgcgacgagcgcaaggcagcgac	CRISPR spacer
actgccgagcgcgccgagcgcaaggccgacgc	Protospacer
   ********** ************ *  .*

260. spacer 30.14|10348550|32|NZ_CP006003|CRISPRCasFinder,CRT matches to MT639648 (Mycobacterium phage Heath, complete genome) position: , mismatch: 8, identity: 0.75

caggccgagcgcgacgagcgcaaggcagcgac	CRISPR spacer
actgccgagcgcgccgagcgcaaggccgacgc	Protospacer
   ********** ************ *  .*

261. spacer 30.14|10348550|32|NZ_CP006003|CRISPRCasFinder,CRT matches to NC_042035 (Mycobacterium phage Zemanar, complete sequence) position: , mismatch: 8, identity: 0.75

caggccgagcgcgacgagcgcaaggcagcgac	CRISPR spacer
actgccgagcgcgccgagcgcaaggccgacgc	Protospacer
   ********** ************ *  .*

262. spacer 30.14|10348550|32|NZ_CP006003|CRISPRCasFinder,CRT matches to NC_042034 (Mycobacterium phage ChrisnMich, complete sequence) position: , mismatch: 8, identity: 0.75

caggccgagcgcgacgagcgcaaggcagcgac	CRISPR spacer
actgccgagcgcgccgagcgcaaggccgacgc	Protospacer
   ********** ************ *  .*

263. spacer 30.14|10348550|32|NZ_CP006003|CRISPRCasFinder,CRT matches to NC_022331 (Mycobacterium phage Bane1, complete genome) position: , mismatch: 8, identity: 0.75

caggccgagcgcgacgagcgcaaggcagcgac	CRISPR spacer
actgccgagcgcgccgagcgcaaggccgacgc	Protospacer
   ********** ************ *  .*

264. spacer 30.14|10348550|32|NZ_CP006003|CRISPRCasFinder,CRT matches to KF279413 (Mycobacterium phage Bane2, complete genome) position: , mismatch: 8, identity: 0.75

caggccgagcgcgacgagcgcaaggcagcgac	CRISPR spacer
actgccgagcgcgccgagcgcaaggccgacgc	Protospacer
   ********** ************ *  .*

265. spacer 30.14|10348550|32|NZ_CP006003|CRISPRCasFinder,CRT matches to MT310870 (Mycobacterium phage RawrgerThat, complete genome) position: , mismatch: 8, identity: 0.75

caggccgagcgcgacgagcgcaaggcagcgac	CRISPR spacer
actgccgagcgcgccgagcgcaaggccgacgc	Protospacer
   ********** ************ *  .*

266. spacer 30.14|10348550|32|NZ_CP006003|CRISPRCasFinder,CRT matches to NC_028968 (Mycobacterium phage BrownCNA, complete genome) position: , mismatch: 8, identity: 0.75

caggccgagcgcgacgagcgcaaggcagcgac	CRISPR spacer
actgccgagcgcgccgagcgcaaggccgacgc	Protospacer
   ********** ************ *  .*

267. spacer 30.14|10348550|32|NZ_CP006003|CRISPRCasFinder,CRT matches to NZ_CP029209 (Nitratireductor sp. OM-1 plasmid pOM-1, complete sequence) position: , mismatch: 8, identity: 0.75

caggccgagcgcgacgagcgcaaggcagcgac	CRISPR spacer
aaggacgagcgctacgagcgcaaggatacctc	Protospacer
 *** ******* ************  .*  *

268. spacer 30.14|10348550|32|NZ_CP006003|CRISPRCasFinder,CRT matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 8, identity: 0.75

caggccgagcgcgacgagcgcaagg-cagcgac	CRISPR spacer
gccgccgagcgcgccgagcgccaggcccacga-	Protospacer
   ********** ******* *** * .***

269. spacer 30.14|10348550|32|NZ_CP006003|CRISPRCasFinder,CRT matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 8, identity: 0.75

caggccgagcgcgacgagcgcaagg-cagcgac	CRISPR spacer
gccgccgagcgcgccgagcgccaggcccacga-	Protospacer
   ********** ******* *** * .***

270. spacer 30.14|10348550|32|NZ_CP006003|CRISPRCasFinder,CRT matches to JQ067093 (Pseudomonas phage PaMx74, partial genome) position: , mismatch: 8, identity: 0.75

caggccgagcgcgacgagcgcaaggcagcgac	CRISPR spacer
cgcgccgagcgcgccgagcgcgaggcgatgag	Protospacer
*. ********** *******.****...**

271. spacer 30.27|10349467|33|NZ_CP006003|CRISPRCasFinder,CRT matches to NZ_CP035512 (Haematobacter massiliensis strain OT1 plasmid pOT1-2, complete sequence) position: , mismatch: 8, identity: 0.758

cacaactcgggtttcgcttccagcgccagcggg	CRISPR spacer
caggcggcgggtttcgcctccagcgccggcggc	Protospacer
** .   **********.*********.****

272. spacer 30.28|10349537|33|NZ_CP006003|CRISPRCasFinder,CRT matches to NZ_CP030264 (Ensifer adhaerens strain Corn53 plasmid AB, complete sequence) position: , mismatch: 8, identity: 0.758

cttggactggcggatggtgccggcctgctgctg	CRISPR spacer
cgaggttatgcggatggtgccgcccggctgctg	Protospacer
*  ** .  ************* ** *******

273. spacer 30.39|10350313|33|NZ_CP006003|CRISPRCasFinder,CRT,PILER-CR matches to MK059749 (Mycobacterium phage CRB2, complete genome) position: , mismatch: 8, identity: 0.758

atgacatcccgccagctcggcctcgccaacctc	CRISPR spacer
ggcgtgatccgccagctcggcctcgccaacctc	Protospacer
.  ... .*************************

274. spacer 30.39|10350313|33|NZ_CP006003|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012477 (Arthrobacter sp. ERGS1:01 isolate water plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.758

atgacatcccgccagctcggcctcgccaacctc	CRISPR spacer
gccgcatcccgccagctcggcatcgccaccgtt	Protospacer
.. .***************** ****** * *.

275. spacer 30.39|10350313|33|NZ_CP006003|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049142 (Pseudomonas nitroreducens strain HBP1 plasmid pPniHBP1_1, complete sequence) position: , mismatch: 8, identity: 0.758

-atgacatcccgccagctcggcctcgccaacctc	CRISPR spacer
cgcaac-tcctgccagctcgtcctcgccaaccat	Protospacer
 ...** ***.********* *********** .

276. spacer 30.41|10350457|33|NZ_CP006003|CRISPRCasFinder,CRT,PILER-CR matches to MN694015 (Marine virus AFVG_250M337, complete genome) position: , mismatch: 8, identity: 0.758

gacggcc-cagcgcctggcgaaagagctggagaa	CRISPR spacer
-acgattgcagcgcatggcgcaagagctggaggg	Protospacer
 ***... ****** ***** ***********..

277. spacer 30.41|10350457|33|NZ_CP006003|CRISPRCasFinder,CRT,PILER-CR matches to MN694608 (Marine virus AFVG_250M55, complete genome) position: , mismatch: 8, identity: 0.758

gacggcc-cagcgcctggcgaaagagctggagaa	CRISPR spacer
-acgattgcagcgcatggcgcaagagctggaggg	Protospacer
 ***... ****** ***** ***********..

278. spacer 30.41|10350457|33|NZ_CP006003|CRISPRCasFinder,CRT,PILER-CR matches to MN694542 (Marine virus AFVG_250M54, complete genome) position: , mismatch: 8, identity: 0.758

gacggcc-cagcgcctggcgaaagagctggagaa	CRISPR spacer
-acgattgcagcgcatggcgcaagagctggaggg	Protospacer
 ***... ****** ***** ***********..

279. spacer 30.41|10350457|33|NZ_CP006003|CRISPRCasFinder,CRT,PILER-CR matches to MN694156 (Marine virus AFVG_250M53, complete genome) position: , mismatch: 8, identity: 0.758

gacggcc-cagcgcctggcgaaagagctggagaa	CRISPR spacer
-acgattgcagcgcatggcgcaagagctggaggg	Protospacer
 ***... ****** ***** ***********..

280. spacer 30.47|10350879|32|NZ_CP006003|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP006990 (Rhizobium sp. IE4771 plasmid pRetIE4771d, complete sequence) position: , mismatch: 8, identity: 0.75

ttccccctgcgcgtcagcgtcgccttgagaat	CRISPR spacer
tgcgccgtgcgcgtcagcctcgccttggtgaa	Protospacer
* * ** *********** ********. .*

281. spacer 30.47|10350879|32|NZ_CP006003|CRISPRCasFinder,CRT,PILER-CR matches to CP007644 (Rhizobium etli bv. phaseoli str. IE4803 plasmid pRetIE4803c, complete sequence) position: , mismatch: 8, identity: 0.75

ttccccctgcgcgtcagcgtcgccttgagaat	CRISPR spacer
tgcgccgtgcgcgtcagcctcgccttggtgaa	Protospacer
* * ** *********** ********. .*

282. spacer 30.75|10348550|33|NZ_CP006003|PILER-CR matches to NZ_CP032326 (Azospirillum brasilense strain MTCC4035 plasmid p5, complete sequence) position: , mismatch: 8, identity: 0.758

ccaggccgagcgcgacgagcgcaaggcagcgac----	CRISPR spacer
gcaggccgagcgcgaccagggca----agcggcctgg	Protospacer
 *************** ** ***    ****.*

283. spacer 30.75|10348550|33|NZ_CP006003|PILER-CR matches to NZ_CP029209 (Nitratireductor sp. OM-1 plasmid pOM-1, complete sequence) position: , mismatch: 8, identity: 0.758

ccaggccgagcgcgacgagcgcaaggcagcgac	CRISPR spacer
caaggacgagcgctacgagcgcaaggatacctc	Protospacer
* *** ******* ************  .*  *

284. spacer 30.76|10348619|34|NZ_CP006003|PILER-CR matches to NZ_AP022333 (Methylosinus sp. C49 isolate Methylosinus sp. C49 plasmid pMSC49a, complete sequence) position: , mismatch: 8, identity: 0.765

ccgtgtgcatcaaggggctcgacatcccgcgctt	CRISPR spacer
gtgtcgccgtcgagggcctcgacatcccgcgctt	Protospacer
 .**   *.**.**** *****************

285. spacer 30.82|10349043|35|NZ_CP006003|PILER-CR matches to NZ_CP054613 (Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence) position: , mismatch: 8, identity: 0.771

ccgacgaactcggtgacatctacttcctcaccgac	CRISPR spacer
tcaacaacttcggtgtcatctacttcctgaccgaa	Protospacer
.*.**.* .****** ************ *****

286. spacer 31.1|11010144|30|NZ_CP006003|CRISPRCasFinder matches to NZ_CP024314 (Rhizobium sp. NXC24 plasmid pRspNXC24c, complete sequence) position: , mismatch: 8, identity: 0.733

aggaggcgcctcccctggcgaagccccctt	CRISPR spacer
cgcgggcgccttccctggcgaaggcccggg	Protospacer
 * .*******.*********** ***

287. spacer 31.1|11010144|30|NZ_CP006003|CRISPRCasFinder matches to MH697589 (Microbacterium phage Neferthena, complete genome) position: , mismatch: 8, identity: 0.733

aggaggcgcctcccctggcgaagccccctt	CRISPR spacer
aggaggcggcacccctggcgaaggagtgct	Protospacer
******** * ************   . .*

288. spacer 31.1|11010144|30|NZ_CP006003|CRISPRCasFinder matches to MT024862 (Microbacterium phage Alakazam, complete genome) position: , mismatch: 8, identity: 0.733

aggaggcgcctcccctggcgaagccccctt	CRISPR spacer
aggaggcggcacccctggcgaaggagtgct	Protospacer
******** * ************   . .*

289. spacer 31.1|11010144|30|NZ_CP006003|CRISPRCasFinder matches to MT451984 (Microbacterium phage Nebulous, complete genome) position: , mismatch: 8, identity: 0.733

aggaggcgcctcccctggcgaagccccctt	CRISPR spacer
aggaggcggcacccctggcgaaggagtgct	Protospacer
******** * ************   . .*

290. spacer 31.1|11010144|30|NZ_CP006003|CRISPRCasFinder matches to NC_011143 (Phenylobacterium zucineum HLK1 plasmid, complete sequence) position: , mismatch: 8, identity: 0.733

aggaggcgcctcccctggcgaagccccctt	CRISPR spacer
atccagcgcctgccctggcggagcccccaa	Protospacer
*   .****** ********.*******

291. spacer 13.1|3422193|34|NZ_CP006003|CRISPRCasFinder matches to HM486077 (Tsukamurella phage TPA2, complete sequence) position: , mismatch: 9, identity: 0.735

----gagaccttgacgctgcccccctcgacgctggccg	CRISPR spacer
acacgcggc----gcgctgcacgcctcgacgctggccg	Protospacer
    * *.*    .****** * ***************

292. spacer 13.1|3422193|34|NZ_CP006003|CRISPRCasFinder matches to NC_015210 (Tsukamurella phage TPA2, complete genome) position: , mismatch: 9, identity: 0.735

----gagaccttgacgctgcccccctcgacgctggccg	CRISPR spacer
acacgcggc----gcgctgcacgcctcgacgctggccg	Protospacer
    * *.*    .****** * ***************

293. spacer 30.14|10348550|32|NZ_CP006003|CRISPRCasFinder,CRT matches to LT559120 (Nonomuraea sp. ATCC 39727 isolate nono1 genome assembly, plasmid: III) position: , mismatch: 9, identity: 0.719

caggccgagcgcgacgagcgcaaggcagcgac	CRISPR spacer
gaggcggagcgcgaggagcgcaaggagtacgc	Protospacer
 **** ******** ********** .   .*

294. spacer 30.14|10348550|32|NZ_CP006003|CRISPRCasFinder,CRT matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.719

caggccgagcgcgacgagcgcaaggcagcgac	CRISPR spacer
ttcgccgagcgcgacgggcgcacggcgacgtt	Protospacer
.  *************.***** ***..** .

295. spacer 30.14|10348550|32|NZ_CP006003|CRISPRCasFinder,CRT matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

caggccgagcgcgacgagcgcaaggcagcgac	CRISPR spacer
gaggccgagcccgacgcgcgcaagccggacgg	Protospacer
 ********* ***** ******* *.*  .

296. spacer 30.14|10348550|32|NZ_CP006003|CRISPRCasFinder,CRT matches to EU307292 (Burkholderia phage Bups phi1 clone 2 partial sequence) position: , mismatch: 9, identity: 0.719

caggccgagcgcgacgagcgcaaggcagcgac	CRISPR spacer
gcgctggcgcgcgacgagcgcaatgaagcgat	Protospacer
  * . * *************** * *****.

297. spacer 30.14|10348550|32|NZ_CP006003|CRISPRCasFinder,CRT matches to MN428050 (Mycobacterium phage Apex, complete genome) position: , mismatch: 9, identity: 0.719

caggccgagcgcgacgagcgcaaggcagcgac	CRISPR spacer
actgccgagcgcgctgagcgcaaggccgacgc	Protospacer
   ********** .*********** *  .*

298. spacer 30.14|10348550|32|NZ_CP006003|CRISPRCasFinder,CRT matches to MN234171 (Mycobacterium phage Magpie, complete genome) position: , mismatch: 9, identity: 0.719

caggccgagcgcgacgagcgcaaggcagcgac	CRISPR spacer
actgccgagcgcgctgagcgcaaggccgacgc	Protospacer
   ********** .*********** *  .*

299. spacer 30.14|10348550|32|NZ_CP006003|CRISPRCasFinder,CRT matches to KX589269 (Mycobacterium phage Fortunato, complete genome) position: , mismatch: 9, identity: 0.719

caggccgagcgcgacgagcgcaaggcagcgac	CRISPR spacer
actgccgagcgcgctgagcgcaaggccgacgc	Protospacer
   ********** .*********** *  .*

300. spacer 30.14|10348550|32|NZ_CP006003|CRISPRCasFinder,CRT matches to MH632120 (Mycobacterium phage Thonko, complete genome) position: , mismatch: 9, identity: 0.719

caggccgagcgcgacgagcgcaaggcagcgac	CRISPR spacer
acagccgagcgggccgagcgcaaggccgacgc	Protospacer
  .******** * ************ *  .*

301. spacer 30.21|10349043|34|NZ_CP006003|CRISPRCasFinder,CRT matches to NZ_CP031116 (Rubrobacter indicoceani strain SCSIO 08198 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.735

cgacgaactcggtgacatctacttcctcaccgac	CRISPR spacer
cgagctctccggtgacatctacttcgacaccgag	Protospacer
***    ..****************  ******

302. spacer 30.21|10349043|34|NZ_CP006003|CRISPRCasFinder,CRT matches to NZ_CP030829 (Neorhizobium sp. NCHU2750 plasmid pNCHU2750b, complete sequence) position: , mismatch: 9, identity: 0.735

cgacgaactcggtgacatctacttcctcaccgac	CRISPR spacer
cgctgttaccggtgacatcgacttcgtcaccgat	Protospacer
** .*   .********** ***** *******.

303. spacer 30.28|10349537|33|NZ_CP006003|CRISPRCasFinder,CRT matches to NZ_CP015882 (Ensifer adhaerens strain Casida A plasmid pCasidaAB, complete sequence) position: , mismatch: 9, identity: 0.727

cttggactggcggatggtgccggcctgctgctg	CRISPR spacer
ggaggttatgcggatggtgccgcccggctgctg	Protospacer
   ** .  ************* ** *******

304. spacer 30.28|10349537|33|NZ_CP006003|CRISPRCasFinder,CRT matches to NZ_CP053709 (Acetobacteraceae bacterium strain PAMC 26569 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.727

cttggactggcggatggtgccggcctgctgctg	CRISPR spacer
gcccgcatggcggatggcgtcggcctgctgccg	Protospacer
 .. *  **********.*.***********.*

305. spacer 30.31|10349747|36|NZ_CP006003|CRISPRCasFinder,CRT matches to NZ_CP018621 (Paenibacillus xylanexedens strain PAMC 22703 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.75

ttcgcgcccctcgggcacggcaggcgttggcttgtg	CRISPR spacer
ttcgcgccactcgcgcacggcaggcgtgatcgtact	Protospacer
******** **** ************* . * *..

306. spacer 30.39|10350313|33|NZ_CP006003|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022605 (Ochrobactrum quorumnocens strain A44 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.727

atgacatcccgccagctcggcctcgccaacctc	CRISPR spacer
ctgtgccgccgccagatcggcctcgccaatctg	Protospacer
 **   . ******* *************.**

307. spacer 30.58|10351658|32|NZ_CP006003|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020900 (Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRphaBra5d, complete sequence) position: , mismatch: 9, identity: 0.719

aacgccgagctcttggtgtcccaggtgatgct	CRISPR spacer
agttccgcgctcttggtgtcgcaggtgccgac	Protospacer
*.. *** ************ ****** .* .

308. spacer 30.58|10351658|32|NZ_CP006003|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013556 (Rhizobium phaseoli strain N931 plasmid pRphaN931d, complete sequence) position: , mismatch: 9, identity: 0.719

aacgccgagctcttggtgtcccaggtgatgct	CRISPR spacer
agttccgcgctcttggtgtcgcaggtgccgac	Protospacer
*.. *** ************ ****** .* .

309. spacer 30.58|10351658|32|NZ_CP006003|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013562 (Rhizobium phaseoli strain N841 plasmid pRphaN841e, complete sequence) position: , mismatch: 9, identity: 0.719

aacgccgagctcttggtgtcccaggtgatgct	CRISPR spacer
agttccgcgctcttggtgtcgcaggtgccgac	Protospacer
*.. *** ************ ****** .* .

310. spacer 30.58|10351658|32|NZ_CP006003|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013531 (Rhizobium phaseoli strain R723 plasmid pRphaR723d, complete sequence) position: , mismatch: 9, identity: 0.719

aacgccgagctcttggtgtcccaggtgatgct	CRISPR spacer
agttccgcgctcttggtgtcgcaggtgccgac	Protospacer
*.. *** ************ ****** .* .

311. spacer 30.58|10351658|32|NZ_CP006003|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013567 (Rhizobium phaseoli strain N831 plasmid pRphaN831d, complete sequence) position: , mismatch: 9, identity: 0.719

aacgccgagctcttggtgtcccaggtgatgct	CRISPR spacer
agttccgcgctcttggtgtcgcaggtgccgac	Protospacer
*.. *** ************ ****** .* .

312. spacer 30.58|10351658|32|NZ_CP006003|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013584 (Rhizobium phaseoli strain N261 plasmid pRphaN261d, complete sequence) position: , mismatch: 9, identity: 0.719

aacgccgagctcttggtgtcccaggtgatgct	CRISPR spacer
agttccgcgctcttggtgtcgcaggtgccgac	Protospacer
*.. *** ************ ****** .* .

313. spacer 30.58|10351658|32|NZ_CP006003|CRISPRCasFinder,CRT,PILER-CR matches to NC_010997 (Rhizobium etli CIAT 652 plasmid pC, complete sequence) position: , mismatch: 9, identity: 0.719

aacgccgagctcttggtgtcccaggtgatgct	CRISPR spacer
agttccgcgctcttggtgtcgcaggtgccgac	Protospacer
*.. *** ************ ****** .* .

314. spacer 30.88|10349467|34|NZ_CP006003|PILER-CR matches to NZ_CP035512 (Haematobacter massiliensis strain OT1 plasmid pOT1-2, complete sequence) position: , mismatch: 9, identity: 0.735

ccacaactcgggtttcgcttccagcgccagcggg	CRISPR spacer
acaggcggcgggtttcgcctccagcgccggcggc	Protospacer
 ** .   **********.*********.****

315. spacer 30.89|10349537|34|NZ_CP006003|PILER-CR matches to NC_016586 (Azospirillum lipoferum 4B plasmid AZO_p2, complete sequence) position: , mismatch: 9, identity: 0.735

ccttggactggcggatggtgccgg----cctgctgctg	CRISPR spacer
cctgggaatggcggatggtgccgggggctgcgct----	Protospacer
*** *** ****************    . .***

316. spacer 30.89|10349537|34|NZ_CP006003|PILER-CR matches to NZ_CP030264 (Ensifer adhaerens strain Corn53 plasmid AB, complete sequence) position: , mismatch: 9, identity: 0.735

ccttggactggcggatggtgccggcctgctgctg	CRISPR spacer
tcgaggttatgcggatggtgccgcccggctgctg	Protospacer
.*  ** .  ************* ** *******

317. spacer 30.89|10349537|34|NZ_CP006003|PILER-CR matches to NC_048135 (UNVERIFIED: Enterobacter phage EcpYZU01, complete genome) position: , mismatch: 9, identity: 0.735

ccttggactggcggatggtgcc-ggcctgctgctg	CRISPR spacer
ccttggacttgcggatgttgccggggttattatt-	Protospacer
********* ******* **** ** .*..*..*

318. spacer 13.1|3422193|34|NZ_CP006003|CRISPRCasFinder matches to CP054921 (Streptomyces sp. NA03103 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.706

gagaccttgacgctgcccccctcgacgctggccg--------	CRISPR spacer
gagaccttgccgctgccaccctcg--------cgcatctgga	Protospacer
********* ******* ******        **

319. spacer 25.1|8885518|31|NZ_CP006003|CRISPRCasFinder matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 10, identity: 0.677

caactcctcttcggagccgaggcgcaccacc	CRISPR spacer
gctctcctcgtccgagccgaggcgcaaacag	Protospacer
   ****** ** *************

320. spacer 25.1|8885518|31|NZ_CP006003|CRISPRCasFinder matches to NZ_CP023071 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence) position: , mismatch: 10, identity: 0.677

caactcctcttcggagccgaggcgcaccacc	CRISPR spacer
gctctcctcgtccgagccgaggcgcaaacag	Protospacer
   ****** ** *************

321. spacer 25.1|8885518|31|NZ_CP006003|CRISPRCasFinder matches to NZ_CP029232 (Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence) position: , mismatch: 10, identity: 0.677

caactcctcttcggagccgaggcgcaccacc	CRISPR spacer
gctctcctcgtccgagccgaggcgcagacag	Protospacer
   ****** ** *************

322. spacer 30.9|10348195|34|NZ_CP006003|CRISPRCasFinder,CRT matches to NZ_CP040824 (Paraoceanicella profunda strain D4M1 plasmid pD4M1F, complete sequence) position: , mismatch: 10, identity: 0.706

ggctccagccgcgcggcgtaggcctggaccatct	CRISPR spacer
aggtcctgccgcgcggcgtcggcctggaagccga	Protospacer
.* *** ************ ********   .

323. spacer 30.21|10349043|34|NZ_CP006003|CRISPRCasFinder,CRT matches to LN889756 (Pseudomonas phage shl2 genome assembly, chromosome: 1) position: , mismatch: 10, identity: 0.706

-----cgacgaactcggtgacatctacttcctcaccgac	CRISPR spacer
attcccca-----tcggtgccatccacttcctcaccgtt	Protospacer
     * *     ****** ****.************ .

324. spacer 30.21|10349043|34|NZ_CP006003|CRISPRCasFinder,CRT matches to MT104465 (Pseudomonas phage MR1, complete genome) position: , mismatch: 10, identity: 0.706

-----cgacgaactcggtgacatctacttcctcaccgac	CRISPR spacer
attcccca-----tcggtgccatccacttcctcaccgtt	Protospacer
     * *     ****** ****.************ .

325. spacer 30.21|10349043|34|NZ_CP006003|CRISPRCasFinder,CRT matches to LN913017 (Pseudomonas phage HC15b2 genome assembly HC15b2, chromosome : 1) position: , mismatch: 10, identity: 0.706

-----cgacgaactcggtgacatctacttcctcaccgac	CRISPR spacer
attcccca-----tcggtgccatccacttcctcaccgtt	Protospacer
     * *     ****** ****.************ .

326. spacer 30.21|10349043|34|NZ_CP006003|CRISPRCasFinder,CRT matches to KU064779 (Pseudomonas phage PPPL-1, complete genome) position: , mismatch: 10, identity: 0.706

cgacgaactcggtgacatctacttcctcaccgac	CRISPR spacer
attcgccatcggtgccatccacttcctcaccgtt	Protospacer
   **   ****** ****.************ .

327. spacer 30.28|10349537|33|NZ_CP006003|CRISPRCasFinder,CRT matches to NC_007974 (Cupriavidus metallidurans CH34 megaplasmid, complete sequence) position: , mismatch: 10, identity: 0.697

cttggactggcggatggtgccggcctgctgctg	CRISPR spacer
gcggccacggcagatggttccggcctgctgctt	Protospacer
 . *   .***.****** *************

328. spacer 30.28|10349537|33|NZ_CP006003|CRISPRCasFinder,CRT matches to NZ_CP046333 (Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3) position: , mismatch: 10, identity: 0.697

cttggactggcggatggtgccggcctgctgctg	CRISPR spacer
gcggccacggcagatggttccggcctgctgctt	Protospacer
 . *   .***.****** *************

329. spacer 30.47|10350879|32|NZ_CP006003|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020331 (Martelella mediterranea DSM 17316 strain MACL11 plasmid pMM593, complete sequence) position: , mismatch: 10, identity: 0.688

ttccccctgcgcgtcagcgtcgccttgagaat	CRISPR spacer
gagacccggcgcgacagcgtcgccttggggcg	Protospacer
    *** ***** *************.*.

330. spacer 30.75|10348550|33|NZ_CP006003|PILER-CR matches to LT559120 (Nonomuraea sp. ATCC 39727 isolate nono1 genome assembly, plasmid: III) position: , mismatch: 10, identity: 0.697

ccaggccgagcgcgacgagcgcaaggcagcgac	CRISPR spacer
ggaggcggagcgcgaggagcgcaaggagtacgc	Protospacer
  **** ******** ********** .   .*

331. spacer 30.89|10349537|34|NZ_CP006003|PILER-CR matches to NZ_CP015882 (Ensifer adhaerens strain Casida A plasmid pCasidaAB, complete sequence) position: , mismatch: 10, identity: 0.706

ccttggactggcggatggtgccggcctgctgctg	CRISPR spacer
tggaggttatgcggatggtgccgcccggctgctg	Protospacer
.   ** .  ************* ** *******

332. spacer 30.89|10349537|34|NZ_CP006003|PILER-CR matches to NC_007974 (Cupriavidus metallidurans CH34 megaplasmid, complete sequence) position: , mismatch: 10, identity: 0.706

ccttggac-----tggcggatggtgccggcctgctgctg	CRISPR spacer
-----ggcggccacggcagatggttccggcctgctgctt	Protospacer
     *.*     .***.****** *************

333. spacer 30.89|10349537|34|NZ_CP006003|PILER-CR matches to NZ_CP046333 (Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3) position: , mismatch: 10, identity: 0.706

ccttggac-----tggcggatggtgccggcctgctgctg	CRISPR spacer
-----ggcggccacggcagatggttccggcctgctgctt	Protospacer
     *.*     .***.****** *************

334. spacer 30.89|10349537|34|NZ_CP006003|PILER-CR matches to NZ_CP053709 (Acetobacteraceae bacterium strain PAMC 26569 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.706

ccttggactggcggatggtgccggcctgctgctg	CRISPR spacer
ggcccgcatggcggatggcgtcggcctgctgccg	Protospacer
  .. *  **********.*.***********.*

335. spacer 30.92|10349747|37|NZ_CP006003|PILER-CR matches to NZ_CP018621 (Paenibacillus xylanexedens strain PAMC 22703 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.73

cttcgcgcccctcgggcacggcaggcgttggcttgtg	CRISPR spacer
gttcgcgccactcgcgcacggcaggcgtgatcgtact	Protospacer
 ******** **** ************* . * *..

336. spacer 30.7|10348053|34|NZ_CP006003|CRISPRCasFinder,CRT matches to NZ_CP013003 (Caulobacter henricii strain CB4 plasmid pCB4, complete sequence) position: , mismatch: 11, identity: 0.676

aggccgtccgcactggcgcggcgatgggcgcact	CRISPR spacer
tagccgttcgcactggcgcggcgttgttcaaggg	Protospacer
 .*****.*************** **  *. .

337. spacer 30.9|10348195|34|NZ_CP006003|CRISPRCasFinder,CRT matches to NZ_CP032685 (Rhizobium sp. CCGE531 plasmid pRCCGE531d, complete sequence) position: , mismatch: 11, identity: 0.676

ggctccagccgcgcggcgtaggcctggaccatct	CRISPR spacer
ccatccagccgcgcggcgatggcctggctgcgat	Protospacer
   ***************  ******* .    *

338. spacer 30.9|10348195|34|NZ_CP006003|CRISPRCasFinder,CRT matches to NZ_CP032690 (Rhizobium sp. CCGE532 plasmid pRCCGE532d, complete sequence) position: , mismatch: 11, identity: 0.676

ggctccagccgcgcggcgtaggcctggaccatct	CRISPR spacer
ccatccagccgcgcggcgatggcctggctgcgat	Protospacer
   ***************  ******* .    *

339. spacer 30.30|10349676|34|NZ_CP006003|CRISPRCasFinder,CRT matches to MF098555 (Cyanophage BHS3, partial genome) position: , mismatch: 11, identity: 0.676

tgtaaccctgctcctccgtcatgcgaatggcttc	CRISPR spacer
gacgttgctgttcctccatcatgcgaatggcgtt	Protospacer
 ... . ***.******.************* *.

340. spacer 30.39|10350313|33|NZ_CP006003|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021372 (Rhizobium sp. ACO-34A plasmid pRACO34Ad, complete sequence) position: , mismatch: 11, identity: 0.667

atgacatcccgccagctcggcctcgccaacctc	CRISPR spacer
cgcccatcccgccagctccgcctcgtcattgct	Protospacer
    ************** ******.** . ..

341. spacer 30.70|10348195|35|NZ_CP006003|PILER-CR matches to NZ_CP040824 (Paraoceanicella profunda strain D4M1 plasmid pD4M1F, complete sequence) position: , mismatch: 11, identity: 0.686

cggctccagccgcgcggcgtaggcctggaccatct	CRISPR spacer
gaggtcctgccgcgcggcgtcggcctggaagccga	Protospacer
 .* *** ************ ********   .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

2013926 : 2087486

uncultured_Caudovirales_phage(25.0%)

tRNA,tail,plate

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_046711549.1\|2013926_2014214_+\|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	NA	NA	NA	NA
WP_046711550.1\|2014232_2015699_+\|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	NA	NA	NA	NA
WP_046711551.1\|2015719_2017159_+\|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	NA	NA	NA	NA
WP_046717523.1\|2017159_2018161_-	carbon-nitrogen hydrolase family protein	NA	NA	NA	NA
WP_046711552.1\|2018230_2019193_-	isopenicillin N synthase family oxygenase	NA	NA	NA	NA
WP_082165567.1\|2020745_2022629_+	hypothetical protein	NA	NA	NA	NA
WP_046711554.1\|2022667_2023018_-	hypothetical protein	NA	NA	NA	NA
WP_046711555.1\|2023280_2023589_+	50S ribosomal protein L21	NA	NA	NA	NA
WP_046711556.1\|2023627_2023900_+	50S ribosomal protein L27	NA	NA	NA	NA
WP_046711557.1\|2024028_2025444_+	GTPase ObgE	NA	NA	NA	NA
WP_046711558.1\|2025448_2026129_+	TrmH family RNA methyltransferase	NA	NA	NA	NA
WP_082165568.1\|2026455_2027055_+	outer membrane lipoprotein carrier protein LolA	NA	NA	NA	NA
WP_046711560.1\|2029235_2030660_-	30S ribosomal protein S12 methylthiotransferase RimO	NA	NA	NA	NA
WP_046711561.1\|2030666_2031782_-	hypothetical protein	NA	NA	NA	NA
WP_046711562.1\|2031790_2032288_-	YajQ family cyclic di-GMP-binding protein	NA	NA	NA	NA
WP_046711563.1\|2032312_2033953_-	RNase J family beta-CASP ribonuclease	NA	NA	NA	NA
WP_046711564.1\|2034252_2034615_+	hypothetical protein	NA	NA	NA	NA
WP_082165569.1\|2034530_2038295_-	hypothetical protein	S4VV57	Pandoravirus	1.1e-09	27.2
WP_082164990.1\|2038682_2039894_-	polysaccharide deacetylase	NA	NA	NA	NA
WP_082164991.1\|2040088_2043910_+	hypothetical protein	NA	NA	NA	NA
WP_046711566.1\|2043958_2046778_-	ATPase AAA	A0A223W0B1	Agrobacterium_phage	5.9e-48	25.7
WP_046711567.1\|2046907_2047507_-	hypothetical protein	NA	NA	NA	NA
WP_046711568.1\|2048047_2048590_-	HNH endonuclease	A0A1P8DIY8	Virus_Rctr197k	2.0e-45	48.3
WP_046711569.1\|2050617_2051919_+	DUF2254 domain-containing protein	NA	NA	NA	NA
WP_046711570.1\|2052559_2053831_-	glycosyltransferase	NA	NA	NA	NA
WP_046711571.1\|2054168_2055182_-	hypothetical protein	NA	NA	NA	NA
WP_046711572.1\|2055262_2055919_-	TrkA family potassium uptake protein	NA	NA	NA	NA
WP_046711573.1\|2055928_2057332_-	potassium transporter Trk	NA	NA	NA	NA
WP_046711574.1\|2058748_2060170_-	Na+/H+ antiporter NhaA	A0A2H4J5W3	uncultured_Caudovirales_phage	1.7e-59	40.7
WP_046717529.1\|2060951_2061566_+	RDD family protein	NA	NA	NA	NA
WP_046711575.1\|2061618_2063493_+	PBS lyase	NA	NA	NA	NA
WP_082165570.1\|2063559_2063943_-	cell wall protein	NA	NA	NA	NA
WP_052770812.1\|2064498_2064801_+	hypothetical protein	NA	NA	NA	NA
WP_046717531.1\|2064913_2065144_-	hypothetical protein	NA	NA	NA	NA
WP_046711576.1\|2065149_2065542_-	gamma-glutamylcyclotransferase	H9D1E0	Salinivibrio_phage	1.8e-11	37.2
WP_046711577.1\|2065538_2065979_-	gamma-glutamylcyclotransferase	NA	NA	NA	NA
WP_046711578.1\|2066065_2067019_-	VrlE	A0A1B1IUD7	uncultured_Mediterranean_phage	1.1e-75	50.0
WP_046711579.1\|2067444_2068056_-	DUF2924 domain-containing protein	NA	NA	NA	NA
WP_046717532.1\|2068179_2068362_-	hypothetical protein	NA	NA	NA	NA
WP_046711580.1\|2068508_2068793_-	hypothetical protein	NA	NA	NA	NA
WP_046711581.1\|2068936_2069374_-	hypothetical protein	NA	NA	NA	NA
WP_046711582.1\|2069385_2071296_-	hypothetical protein	NA	NA	NA	NA
WP_046711583.1\|2071359_2072697_-\|tail	tail protein	NA	NA	NA	NA
WP_046711584.1\|2072706_2073102_-	hypothetical protein	NA	NA	NA	NA
WP_046711585.1\|2073107_2073803_-	hypothetical protein	NA	NA	NA	NA
WP_046711586.1\|2073810_2074341_-	hypothetical protein	NA	NA	NA	NA
WP_046717533.1\|2074342_2075854_-\|plate	t4-like baseplate wedge	NA	NA	NA	NA
WP_046711587.1\|2076644_2076923_+	hypothetical protein	NA	NA	NA	NA
WP_046711588.1\|2076978_2077365_-	hypothetical protein	NA	NA	NA	NA
WP_046711589.1\|2077372_2078044_-	hypothetical protein	NA	NA	NA	NA
WP_046711590.1\|2078052_2078631_-	hypothetical protein	NA	NA	NA	NA
WP_046711591.1\|2078627_2079923_-	late control protein D	NA	NA	NA	NA
WP_046711592.1\|2079919_2080261_-	hypothetical protein	NA	NA	NA	NA
WP_046711593.1\|2080260_2080773_-	hypothetical protein	NA	NA	NA	NA
WP_046711594.1\|2080787_2083481_-\|tail	phage tail tape measure protein	A0A2H4J055	uncultured_Caudovirales_phage	6.3e-23	29.2
WP_046711595.1\|2083484_2083676_-	hypothetical protein	NA	NA	NA	NA
WP_046711596.1\|2083672_2084446_-	hypothetical protein	NA	NA	NA	NA
WP_046711597.1\|2084554_2085016_-\|tail	tail protein	NA	NA	NA	NA
WP_082164992.1\|2085031_2085877_-\|tail	phage tail sheath family protein	J9PVC2	Bacillus_phage	2.3e-19	30.7
WP_082164993.1\|2085713_2087486_-\|tail	phage tail sheath protein	NA	NA	NA	NA

DBSCAN-SWA_2

2091875 : 2131319

Acidithiobacillus_phage(20.0%)

portal,head,capsid,terminase,integrase,transposase

attL 2086643:2086658|attR 2107581:2107596

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2086643:2086658	attL	NA	NA	NA	NA
WP_046711607.1\|2091875_2092487_-\|capsid	phage major capsid protein	A0A1B1P7E3	Bacillus_phage	3.6e-35	42.3
WP_046711608.1\|2092532_2093231_-	hypothetical protein	NA	NA	NA	NA
WP_046711609.1\|2093227_2094580_-	N-6 DNA methylase	A0A0H3UZK1	Geobacillus_virus	7.8e-22	28.7
WP_046711610.1\|2094572_2094758_-	hypothetical protein	NA	NA	NA	NA
WP_046717536.1\|2094809_2095754_-\|head	head morphogenesis protein	NA	NA	NA	NA
WP_046711611.1\|2096325_2096607_-	hypothetical protein	NA	NA	NA	NA
WP_046711612.1\|2096603_2098628_-\|portal	phage portal protein	A0A0U3E050	Pseudomonas_phage	1.6e-50	30.5
WP_046711613.1\|2098837_2099758_+	hypothetical protein	NA	NA	NA	NA
WP_082164994.1\|2099914_2101198_+	hypothetical protein	A0A2D2W617	Pectobacterium_phage	1.0e-10	33.9
WP_046717538.1\|2101312_2101876_-\|terminase	terminase	NA	NA	NA	NA
WP_046711614.1\|2102001_2102214_+	hypothetical protein	NA	NA	NA	NA
WP_046711615.1\|2103423_2104038_+\|integrase	integrase	NA	NA	NA	NA
WP_052771430.1\|2105838_2106528_-	hypothetical protein	NA	NA	NA	NA
WP_046711617.1\|2106800_2107631_-	hypothetical protein	NA	NA	NA	NA
2107581:2107596	attR	NA	NA	NA	NA
WP_046711618.1\|2107606_2107945_-	hypothetical protein	NA	NA	NA	NA
WP_046711619.1\|2107941_2108601_-	3'-5' exonuclease	A0A0A8WJ41	Clostridium_phage	6.5e-06	26.4
WP_046711620.1\|2108600_2109776_-	PD-(D/E)XK nuclease family protein	NA	NA	NA	NA
WP_046711621.1\|2109906_2110503_-	hypothetical protein	NA	NA	NA	NA
WP_082164995.1\|2111851_2112607_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_046711622.1\|2112838_2113159_+	hypothetical protein	NA	NA	NA	NA
WP_046711623.1\|2113164_2113908_+	hypothetical protein	NA	NA	NA	NA
WP_046711624.1\|2113996_2115505_+	ATP-dependent helicase	A7WKN6	Acidianus_filamentous_virus	8.4e-25	26.6
WP_046711625.1\|2115531_2118717_+	hypothetical protein	NA	NA	NA	NA
WP_046717541.1\|2118824_2119004_+	hypothetical protein	NA	NA	NA	NA
WP_046717542.1\|2119095_2119632_+	DUF2924 domain-containing protein	K4I3X1	Acidithiobacillus_phage	4.9e-12	34.6
WP_046711626.1\|2119628_2119829_+	hypothetical protein	NA	NA	NA	NA
WP_046711627.1\|2119825_2121385_+	recombinase family protein	K4ICM1	Acidithiobacillus_phage	6.1e-71	43.3
WP_046711628.1\|2121381_2121819_+	hypothetical protein	NA	NA	NA	NA
WP_046711629.1\|2121933_2122368_+	hypothetical protein	NA	NA	NA	NA
WP_046711630.1\|2124661_2125816_+	serine/threonine protein kinase	NA	NA	NA	NA
WP_046711631.1\|2125925_2126279_-	XRE family transcriptional regulator	NA	NA	NA	NA
WP_046711632.1\|2126331_2126697_-	XRE family transcriptional regulator	NA	NA	NA	NA
WP_046711633.1\|2126894_2128751_+	serine/threonine protein kinase	A0A2R8FEI0	Brazilian_cedratvirus	7.4e-07	26.1
WP_046711634.1\|2128975_2130565_+\|transposase	transposase	NA	NA	NA	NA
WP_046711635.1\|2130551_2131319_+\|transposase	transposase	A0A2L1IVB6	Escherichia_phage	3.8e-42	37.2

DBSCAN-SWA_3

6794531 : 6835896

Ralstonia_phage(50.0%)

protease,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_046714476.1\|6794531_6795617_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_046714477.1\|6795580_6797323_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_046714478.1\|6797351_6797741_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_046714479.1\|6797810_6798302_-	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_046714480.1\|6798455_6799937_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_046714481.1\|6799977_6800472_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_082165291.1\|6800512_6801769_-	hypothetical protein	NA	NA	NA	NA
WP_046714482.1\|6802174_6803113_-	type VI secretion system-associated protein TagF	NA	NA	NA	NA
WP_046714483.1\|6803100_6806802_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_046714484.1\|6806812_6807493_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_046714485.1\|6807583_6808987_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_082165292.1\|6808983_6809670_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_074954958.1\|6809960_6812189_+	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	1.4e-23	26.5
WP_082165293.1\|6812201_6814418_+	type VI secretion system tip protein VgrG	NA	NA	NA	NA
WP_052771139.1\|6814424_6817223_+	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	3.2e-30	28.1
WP_046714487.1\|6817233_6817737_+	hypothetical protein	NA	NA	NA	NA
WP_046714488.1\|6817749_6818127_+	DUF4150 domain-containing protein	NA	NA	NA	NA
WP_046714489.1\|6818131_6820126_+	hypothetical protein	NA	NA	NA	NA
WP_046714490.1\|6820132_6821164_+	DUF2169 domain-containing protein	NA	NA	NA	NA
WP_046714491.1\|6821160_6822264_+	hypothetical protein	NA	NA	NA	NA
WP_046714492.1\|6822271_6823198_-	DUF3396 domain-containing protein	NA	NA	NA	NA
WP_046714493.1\|6823395_6824301_+	hypothetical protein	NA	NA	NA	NA
WP_082165294.1\|6824352_6825492_+	hypothetical protein	NA	NA	NA	NA
WP_046714494.1\|6825536_6825860_+	hypothetical protein	NA	NA	NA	NA
WP_046714495.1\|6825919_6826243_+	hypothetical protein	NA	NA	NA	NA
WP_046714496.1\|6826382_6826706_+	hypothetical protein	NA	NA	NA	NA
WP_046714497.1\|6826771_6827353_-	hypothetical protein	NA	NA	NA	NA
WP_046714498.1\|6828369_6829920_+	Glu/Leu/Phe/Val dehydrogenase	NA	NA	NA	NA
WP_046714499.1\|6830082_6830442_-	PilZ domain-containing protein	NA	NA	NA	NA
WP_046714500.1\|6830611_6831250_+	hypothetical protein	NA	NA	NA	NA
WP_082165619.1\|6831272_6832730_-\|protease	serine protease	A0A1B1IT49	uncultured_Mediterranean_phage	4.6e-20	26.1
WP_046714501.1\|6832792_6833428_-	nucleotide exchange factor GrpE	NA	NA	NA	NA
WP_046714502.1\|6833526_6833769_-	hypothetical protein	NA	NA	NA	NA
WP_046718155.1\|6833877_6835896_-\|protease	ATP-dependent zinc metalloprotease FtsH	C7U047	Ostreococcus_tauri_virus	5.8e-106	44.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP006003

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection