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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP011381 Moraxella bovoculi strain 58086, complete genome 5 crisprs cas12a,cas4,cas1,cas2,csx1,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csx16,cas6,DEDDh,cas3,cas5,cas8c,cas7,csa3,cas14j 2 34 2 0

Results visualization

1. NZ_CP011381
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011381_1 51957-53323 TypeV-A,TypeI-A NA
21 spacers
cas2,cas1,cas4,cas12a,csa3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011381_2 452173-453312 TypeIII NA
16 spacers
csx1,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011381_3 472067-473068 TypeIII NA
14 spacers
cas2,cas1,cas6

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011381_4 816477-824159 TypeI NA
116 spacers
cas2,cas1,cas4,cas7,cas8c,cas5,cas3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011381_5 846180-846347 Orphan NA
2 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP011381_2 2.10|452830|33|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR 452830-452862 33 NZ_CP011381.1 466509-466541 0 1.0
NZ_CP011381_3 3.5|472379|33|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 472379-472411 33 NZ_CP011381.1 124848-124880 0 1.0

1. spacer 2.10|452830|33|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR matches to position: 466509-466541, mismatch: 0, identity: 1.0

ggatgtttgacgctccaagctccaatctttggc	CRISPR spacer
ggatgtttgacgctccaagctccaatctttggc	Protospacer
*********************************

2. spacer 3.5|472379|33|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to position: 124848-124880, mismatch: 0, identity: 1.0

ggttggagtggcactcatcgcaagccctgagtt	CRISPR spacer
ggttggagtggcactcatcgcaagccctgagtt	Protospacer
*********************************

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP011381_4 4.54|820005|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 820005-820038 34 KR093652 Moraxella phage Mcat28, complete genome 15315-15348 1 0.971
NZ_CP011381_4 4.86|822118|34|NZ_CP011381|CRISPRCasFinder,CRT 822118-822151 34 KR093652 Moraxella phage Mcat28, complete genome 15315-15348 1 0.971
NZ_CP011381_2 2.1|452209|33|NZ_CP011381|CRISPRCasFinder,CRT 452209-452241 33 NZ_CP011375 Moraxella bovoculi strain 58069 plasmid unnamed, complete sequence 3958-3990 2 0.939
NZ_CP011381_5 5.2|846286|25|NZ_CP011381|PILER-CR 846286-846310 25 NC_008243 Chelativorans sp. BNC1 plasmid 2, complete sequence 19915-19939 3 0.88
NZ_CP011381_1 1.12|52693|28|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR 52693-52720 28 NZ_CP015007 Aminobacter aminovorans strain KCTC 2477 plasmid pAA02, complete sequence 25170-25197 4 0.857
NZ_CP011381_1 1.4|52185|30|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR 52185-52214 30 NC_025249 Lactococcus lactis subsp. cremoris MG1363 plasmid pFI430, complete sequence 51681-51710 5 0.833
NZ_CP011381_1 1.8|52438|29|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR 52438-52466 29 LR025196 Escherichia phage vB_Eco_SLUR63 genome assembly, complete genome: monopartite 24570-24598 5 0.828
NZ_CP011381_1 1.8|52438|29|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR 52438-52466 29 LR025197 Escherichia phage vB_Eco_SLUR75 genome assembly, complete genome: monopartite 42849-42877 5 0.828
NZ_CP011381_1 1.8|52438|29|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR 52438-52466 29 LT907986 Escherichia phage vB_Eco_SLUR25 genome assembly, complete genome: monopartite 6068-6096 5 0.828
NZ_CP011381_1 1.8|52438|29|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR 52438-52466 29 MK672798 Escherichia phage Skure, complete genome 35502-35530 5 0.828
NZ_CP011381_1 1.8|52438|29|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR 52438-52466 29 NC_028831 Escherichia phage slur01, complete genome 58404-58432 5 0.828
NZ_CP011381_1 1.8|52438|29|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR 52438-52466 29 KM236243 Escherichia phage Seurat, complete genome 33004-33032 5 0.828
NZ_CP011381_1 1.8|52438|29|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR 52438-52466 29 KP064094 Enterobacteria phage CAjan, complete genome 36320-36348 5 0.828
NZ_CP011381_1 1.8|52438|29|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR 52438-52466 29 KX534337 Escherichia phage Greed, partial genome 54815-54843 5 0.828
NZ_CP011381_1 1.8|52438|29|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR 52438-52466 29 LR025195 Escherichia phage vB_Eco_SLUR76 genome assembly, complete genome: monopartite 15545-15573 5 0.828
NZ_CP011381_1 1.8|52438|29|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR 52438-52466 29 LR025198 Escherichia phage vB_Eco_SLUR26 genome assembly, complete genome: monopartite 15547-15575 5 0.828
NZ_CP011381_1 1.13|52757|28|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR 52757-52784 28 NZ_CP021824 Sinorhizobium meliloti strain KH46 plasmid psymA, complete sequence 1516150-1516177 5 0.821
NZ_CP011381_1 1.14|52821|27|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR 52821-52847 27 NZ_CP028969 Aminobacter sp. MSH1 plasmid pUSP1, complete sequence 117868-117894 5 0.815
NZ_CP011381_1 1.14|52821|27|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR 52821-52847 27 NZ_CP026266 Aminobacter sp. MSH1 plasmid pAM01, complete sequence 115162-115188 5 0.815
NZ_CP011381_1 1.18|53073|27|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR 53073-53099 27 NZ_CP045273 Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence 13612-13638 5 0.815
NZ_CP011381_5 5.4|846283|31|NZ_CP011381|CRISPRCasFinder 846283-846313 31 NC_008243 Chelativorans sp. BNC1 plasmid 2, complete sequence 19909-19939 5 0.839
NZ_CP011381_1 1.3|52121|28|NZ_CP011381|CRISPRCasFinder,CRT 52121-52148 28 NZ_CP032678 Pseudomonas sp. Leaf58 plasmid pBASL58, complete sequence 142817-142844 6 0.786
NZ_CP011381_1 1.13|52757|28|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR 52757-52784 28 NZ_CP004389 Thalassospira xiamenensis M-5 = DSM 17429 strain M-5 plasmid unnamed, complete sequence 24001-24028 6 0.786
NZ_CP011381_1 1.13|52757|28|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR 52757-52784 28 NC_010474 Synechococcus sp. PCC 7002 plasmid pAQ7, complete sequence 183833-183860 6 0.786
NZ_CP011381_1 1.13|52757|28|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR 52757-52784 28 NZ_CP016489 Synechococcus sp. PCC 8807 plasmid unnamed6, complete sequence 162992-163019 6 0.786
NZ_CP011381_1 1.14|52821|27|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR 52821-52847 27 NZ_AP019820 Enterobacter hormaechei subsp. hoffmannii strain OIPH-N069 plasmid pN069_3, complete sequence 35527-35553 6 0.778
NZ_CP011381_2 2.2|452278|32|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR 452278-452309 32 KP869112 Escherichia coli O157 typing phage 14, partial genome 66828-66859 6 0.812
NZ_CP011381_2 2.2|452278|32|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR 452278-452309 32 NC_022323 Escherichia phage 2 JES-2013, complete genome 86064-86095 6 0.812
NZ_CP011381_2 2.2|452278|32|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR 452278-452309 32 MH752840 Escherichia phage vB_EcoM-Pr121LW, complete genome 18037-18068 6 0.812
NZ_CP011381_2 2.2|452278|32|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR 452278-452309 32 KP869102 Escherichia coli O157 typing phage 4, partial genome 113627-113658 6 0.812
NZ_CP011381_2 2.2|452278|32|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR 452278-452309 32 MN850642 Escherichia phage navn, complete genome 66331-66362 6 0.812
NZ_CP011381_2 2.2|452278|32|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR 452278-452309 32 MN850627 Escherichia phage pangalan, complete genome 52803-52834 6 0.812
NZ_CP011381_4 4.44|819345|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 819345-819378 34 NZ_CP043499 Rhizobium grahamii strain BG7 plasmid unnamed, complete sequence 1122568-1122601 6 0.824
NZ_CP011381_4 4.77|821523|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 821523-821556 34 NZ_CP043499 Rhizobium grahamii strain BG7 plasmid unnamed, complete sequence 1122568-1122601 6 0.824
NZ_CP011381_1 1.8|52438|29|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR 52438-52466 29 NZ_LR134403 Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence 376430-376458 7 0.759
NZ_CP011381_1 1.8|52438|29|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR 52438-52466 29 NC_010474 Synechococcus sp. PCC 7002 plasmid pAQ7, complete sequence 17872-17900 7 0.759
NZ_CP011381_1 1.8|52438|29|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR 52438-52466 29 NZ_CP014003 Synechococcus sp. PCC 73109 plasmid unnamed5, complete sequence 136850-136878 7 0.759
NZ_CP011381_1 1.8|52438|29|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR 52438-52466 29 NZ_CP016489 Synechococcus sp. PCC 8807 plasmid unnamed6, complete sequence 14436-14464 7 0.759
NZ_CP011381_1 1.8|52438|29|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR 52438-52466 29 NZ_CP016482 Synechococcus sp. PCC 7117 plasmid unnamed5, complete sequence 128850-128878 7 0.759
NZ_CP011381_2 2.4|452415|33|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR 452415-452447 33 KF929199 Staphylococcus phage vB_SepS_SEP9, complete genome 86735-86767 7 0.788
NZ_CP011381_2 2.13|453037|34|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR 453037-453070 34 AP014258 Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S27-C55, *** SEQUENCING IN PROGRESS *** 5134-5167 7 0.794
NZ_CP011381_2 2.13|453037|34|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR 453037-453070 34 MH616856 Microviridae sp. isolate ctcg971, complete genome 3855-3888 8 0.765
NZ_CP011381_3 3.11|472793|33|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 472793-472825 33 NZ_CP050084 Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b2, complete sequence 381242-381274 8 0.758
NZ_CP011381_3 3.11|472793|33|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 472793-472825 33 NZ_CP030762 Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed2, complete sequence 399824-399856 8 0.758
NZ_CP011381_3 3.11|472793|33|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 472793-472825 33 NZ_CP053209 Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1A, complete sequence 351821-351853 8 0.758
NZ_CP011381_4 4.2|816574|33|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 816574-816606 33 NZ_CP049734 Rhizobium leguminosarum strain A1 plasmid unnamed1, complete sequence 86525-86557 8 0.758
NZ_CP011381_4 4.2|816574|33|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 816574-816606 33 CP049734 Rhizobium leguminosarum strain A1 plasmid pRLa11, complete sequence 203764-203796 8 0.758
NZ_CP011381_4 4.2|816574|33|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 816574-816606 33 NZ_CP054035 Rhizobium sp. JKLM13E plasmid pPR13E04, complete sequence 54544-54576 8 0.758
NZ_CP011381_4 4.2|816574|33|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 816574-816606 33 NZ_CP054024 Rhizobium sp. JKLM12A2 plasmid pPR12A203, complete sequence 122474-122506 8 0.758
NZ_CP011381_4 4.4|816705|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 816705-816738 34 MN693498 Marine virus AFVG_25M563, complete genome 24324-24357 8 0.765
NZ_CP011381_4 4.8|816968|33|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 816968-817000 33 KR093633 Moraxella phage Mcat9, complete genome 15554-15586 8 0.758
NZ_CP011381_4 4.14|817363|33|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 817363-817395 33 MT074469 Salmonella phage rabagast, complete genome 72647-72679 8 0.758
NZ_CP011381_4 4.14|817363|33|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 817363-817395 33 MH688040 Salmonella phage Mooltan, complete genome 99408-99440 8 0.758
NZ_CP011381_4 4.14|817363|33|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 817363-817395 33 LR811967 Salmonella phage Se_EM1 genome assembly, chromosome: 1 61260-61292 8 0.758
NZ_CP011381_4 4.14|817363|33|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 817363-817395 33 MH427377 Escherichia phage vB_EcoM Sa157lw, complete genome 67693-67725 8 0.758
NZ_CP011381_4 4.14|817363|33|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 817363-817395 33 MN066127 Salmonella phage Matapan, complete genome 99396-99428 8 0.758
NZ_CP011381_4 4.14|817363|33|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 817363-817395 33 MH940212 Salmonella phage PS5, complete genome 31116-31148 8 0.758
NZ_CP011381_4 4.14|817363|33|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 817363-817395 33 MT974436 Salmonella phage ISTP3, complete genome 61930-61962 8 0.758
NZ_CP011381_4 4.14|817363|33|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 817363-817395 33 NC_016570 Escherichia phage vB_EcoM_CBA120, complete genome 58963-58995 8 0.758
NZ_CP011381_4 4.14|817363|33|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 817363-817395 33 MH370371 Salmonella phage S118, complete genome 59242-59274 8 0.758
NZ_CP011381_4 4.14|817363|33|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 817363-817395 33 JN593240 Escherichia virus CBA120, complete genome 58963-58995 8 0.758
NZ_CP011381_4 4.14|817363|33|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 817363-817395 33 JN673056 Escherichia phage PhaxI, complete genome 59403-59435 8 0.758
NZ_CP011381_4 4.14|817363|33|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 817363-817395 33 MH370368 Salmonella phage S115, complete genome 59209-59241 8 0.758
NZ_CP011381_4 4.20|817761|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 817761-817794 34 CP054460 Escherichia coli strain SCU-103 plasmid pSCU-103-3 27850-27883 8 0.765
NZ_CP011381_4 4.20|817761|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 817761-817794 34 NZ_CP033883 Escherichia coli strain 50579417 plasmid p50579417_2, complete sequence 20168-20201 8 0.765
NZ_CP011381_4 4.20|817761|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 817761-817794 34 CP027378 Escherichia coli strain 2013C-4404 plasmid unnamed2 55766-55799 8 0.765
NZ_CP011381_4 4.20|817761|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 817761-817794 34 NZ_LT985278 Escherichia coli strain 499 plasmid RCS68_p, complete sequence 37555-37588 8 0.765
NZ_CP011381_4 4.20|817761|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 817761-817794 34 NZ_MG299151 Shigella sonnei strain SH287-2 plasmid pSH287-2, complete sequence 93272-93305 8 0.765
NZ_CP011381_4 4.20|817761|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 817761-817794 34 NZ_KY471628 Shigella sonnei strain SH15sh99 plasmid pSH15sh99, complete sequence 87712-87745 8 0.765
NZ_CP011381_4 4.20|817761|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 817761-817794 34 NZ_MG299131 Shigella sonnei strain SH271-2 plasmid pSH271-2, complete sequence 93272-93305 8 0.765
NZ_CP011381_4 4.20|817761|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 817761-817794 34 NZ_KY471629 Shigella sonnei strain SH15sh105 plasmid pSH15sh104, complete sequence 87712-87745 8 0.765
NZ_CP011381_4 4.20|817761|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 817761-817794 34 NZ_MG299133 Shigella sonnei strain SH272-2 plasmid pSH272-2, complete sequence 93272-93305 8 0.765
NZ_CP011381_4 4.20|817761|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 817761-817794 34 NZ_CP025625 Escherichia coli strain SCEC020007 plasmid pBOKZ_020007, complete sequence 68380-68413 8 0.765
NZ_CP011381_4 4.20|817761|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 817761-817794 34 NZ_MG299128 Shigella sonnei strain SH262-2 plasmid pSH262-2, complete sequence 93272-93305 8 0.765
NZ_CP011381_4 4.20|817761|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 817761-817794 34 NZ_MG299147 Shigella sonnei strain SH284-2 plasmid pSH284-2, complete sequence 93272-93305 8 0.765
NZ_CP011381_4 4.20|817761|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 817761-817794 34 NZ_CP053733 Escherichia coli strain CP55_Sichuan plasmid pCP55-141k, complete sequence 122084-122117 8 0.765
NZ_CP011381_4 4.20|817761|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 817761-817794 34 NZ_CP009052 Escherichia coli NCCP15648 plasmid p15648-2, complete sequence 67972-68005 8 0.765
NZ_CP011381_4 4.20|817761|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 817761-817794 34 NZ_CP024887 Escherichia coli strain AR_0017 plasmid unitig_1_pilon, complete sequence 42095-42128 8 0.765
NZ_CP011381_4 4.20|817761|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 817761-817794 34 NC_014477 Escherichia coli plasmid pCT, complete sequence 77741-77774 8 0.765
NZ_CP011381_4 4.20|817761|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 817761-817794 34 NZ_CP051720 Escherichia coli strain SCU-116 plasmid pSCU-116-1, complete sequence 66930-66963 8 0.765
NZ_CP011381_4 4.20|817761|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 817761-817794 34 NZ_CP027324 Escherichia coli strain 2013C-3033 plasmid unnamed, complete sequence 89167-89200 8 0.765
NZ_CP011381_4 4.20|817761|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 817761-817794 34 NC_011754 Escherichia coli ED1a plasmid pECOED, complete sequence 99555-99588 8 0.765
NZ_CP011381_4 4.20|817761|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 817761-817794 34 NZ_LT985270 Escherichia coli strain 716 plasmid RCS56_p, complete sequence 88328-88361 8 0.765
NZ_CP011381_4 4.22|817892|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 817892-817925 34 NZ_MG299151 Shigella sonnei strain SH287-2 plasmid pSH287-2, complete sequence 93271-93304 8 0.765
NZ_CP011381_4 4.22|817892|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 817892-817925 34 NZ_KY471628 Shigella sonnei strain SH15sh99 plasmid pSH15sh99, complete sequence 87711-87744 8 0.765
NZ_CP011381_4 4.22|817892|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 817892-817925 34 NZ_MG299131 Shigella sonnei strain SH271-2 plasmid pSH271-2, complete sequence 93271-93304 8 0.765
NZ_CP011381_4 4.22|817892|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 817892-817925 34 NZ_KY471629 Shigella sonnei strain SH15sh105 plasmid pSH15sh104, complete sequence 87711-87744 8 0.765
NZ_CP011381_4 4.22|817892|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 817892-817925 34 NZ_MG299133 Shigella sonnei strain SH272-2 plasmid pSH272-2, complete sequence 93271-93304 8 0.765
NZ_CP011381_4 4.22|817892|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 817892-817925 34 NZ_CP025625 Escherichia coli strain SCEC020007 plasmid pBOKZ_020007, complete sequence 68379-68412 8 0.765
NZ_CP011381_4 4.22|817892|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 817892-817925 34 NZ_MG299128 Shigella sonnei strain SH262-2 plasmid pSH262-2, complete sequence 93271-93304 8 0.765
NZ_CP011381_4 4.22|817892|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 817892-817925 34 NZ_MG299147 Shigella sonnei strain SH284-2 plasmid pSH284-2, complete sequence 93271-93304 8 0.765
NZ_CP011381_4 4.22|817892|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 817892-817925 34 NZ_CP053733 Escherichia coli strain CP55_Sichuan plasmid pCP55-141k, complete sequence 122083-122116 8 0.765
NZ_CP011381_4 4.22|817892|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 817892-817925 34 NZ_CP009052 Escherichia coli NCCP15648 plasmid p15648-2, complete sequence 67971-68004 8 0.765
NZ_CP011381_4 4.22|817892|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 817892-817925 34 NZ_CP024887 Escherichia coli strain AR_0017 plasmid unitig_1_pilon, complete sequence 42094-42127 8 0.765
NZ_CP011381_4 4.22|817892|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 817892-817925 34 NC_014477 Escherichia coli plasmid pCT, complete sequence 77740-77773 8 0.765
NZ_CP011381_4 4.22|817892|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 817892-817925 34 NZ_CP051720 Escherichia coli strain SCU-116 plasmid pSCU-116-1, complete sequence 66929-66962 8 0.765
NZ_CP011381_4 4.22|817892|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 817892-817925 34 NZ_CP027324 Escherichia coli strain 2013C-3033 plasmid unnamed, complete sequence 89166-89199 8 0.765
NZ_CP011381_4 4.22|817892|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 817892-817925 34 CP054460 Escherichia coli strain SCU-103 plasmid pSCU-103-3 27851-27884 8 0.765
NZ_CP011381_4 4.22|817892|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 817892-817925 34 NC_011754 Escherichia coli ED1a plasmid pECOED, complete sequence 99554-99587 8 0.765
NZ_CP011381_4 4.22|817892|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 817892-817925 34 NZ_CP033883 Escherichia coli strain 50579417 plasmid p50579417_2, complete sequence 20169-20202 8 0.765
NZ_CP011381_4 4.22|817892|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 817892-817925 34 CP027378 Escherichia coli strain 2013C-4404 plasmid unnamed2 55767-55800 8 0.765
NZ_CP011381_4 4.22|817892|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 817892-817925 34 NZ_LT985270 Escherichia coli strain 716 plasmid RCS56_p, complete sequence 88327-88360 8 0.765
NZ_CP011381_4 4.22|817892|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 817892-817925 34 NZ_LT985278 Escherichia coli strain 499 plasmid RCS68_p, complete sequence 37556-37589 8 0.765
NZ_CP011381_4 4.71|821127|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 821127-821160 34 NZ_AP018173 Calothrix sp. NIES-2098 plasmid plasmid1 DNA, complete genome 60651-60684 8 0.765
NZ_CP011381_4 4.103|823240|34|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR 823240-823273 34 NZ_AP018173 Calothrix sp. NIES-2098 plasmid plasmid1 DNA, complete genome 60651-60684 8 0.765
NZ_CP011381_2 2.2|452278|32|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR 452278-452309 32 NZ_CP020372 Candidatus Thiodictyon syntrophicum strain Cad16T plasmid pTs485, complete sequence 80757-80788 9 0.719
NZ_CP011381_2 2.11|452899|33|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR 452899-452931 33 NC_007949 Polaromonas sp. JS666 plasmid 1, complete sequence 335096-335128 9 0.727
NZ_CP011381_4 4.2|816574|33|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 816574-816606 33 NZ_CP017943 Phyllobacterium zundukense strain Tri-48 plasmid unnamed2, complete sequence 225244-225276 9 0.727
NZ_CP011381_4 4.14|817363|33|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 817363-817395 33 MN871502 UNVERIFIED: Salmonella phage SeHz-1, complete genome 66040-66072 9 0.727
NZ_CP011381_4 4.14|817363|33|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 817363-817395 33 MT074476 Salmonella phage kage, complete genome 75071-75103 9 0.727
NZ_CP011381_4 4.14|817363|33|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 817363-817395 33 MH791405 UNVERIFIED: Salmonella phage SeSz-1, complete genome 65032-65064 9 0.727
NZ_CP011381_4 4.14|817363|33|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 817363-817395 33 NC_049502 Salmonella phage bering, complete genome 77100-77132 9 0.727
NZ_CP011381_4 4.14|817363|33|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 817363-817395 33 NC_016073 Salmonella phage SFP10, complete genome 60381-60413 9 0.727
NZ_CP011381_4 4.14|817363|33|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 817363-817395 33 KY000003 Salmonella phage STP07, complete genome 82302-82334 9 0.727
NZ_CP011381_4 4.14|817363|33|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 817363-817395 33 NC_031045 Salmonella phage GG32, complete genome 98005-98037 9 0.727
NZ_CP011381_4 4.49|819675|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 819675-819708 34 MF172979 Erysipelothrix phage phi1605, complete genome 35486-35519 9 0.735
NZ_CP011381_4 4.71|821127|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 821127-821160 34 MN693083 Marine virus AFVG_25M55, complete genome 14696-14729 9 0.735
NZ_CP011381_4 4.82|821853|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 821853-821886 34 MF172979 Erysipelothrix phage phi1605, complete genome 35486-35519 9 0.735
NZ_CP011381_4 4.103|823240|34|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR 823240-823273 34 MN693083 Marine virus AFVG_25M55, complete genome 14696-14729 9 0.735
NZ_CP011381_4 4.113|823897|34|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR 823897-823930 34 NZ_CP040452 Halomonas sp. PA16-9 plasmid p_unnamed1, complete sequence 1159887-1159920 9 0.735
NZ_CP011381_4 4.115|824029|33|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR 824029-824061 33 NC_027364 Escherichia phage PBECO 4, complete genome 47059-47091 9 0.727
NZ_CP011381_4 4.115|824029|33|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR 824029-824061 33 MH383160 Escherichia phage UB, complete genome 107649-107681 9 0.727
NZ_CP011381_4 4.115|824029|33|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR 824029-824061 33 LC494302 Escherichia phage SP27 DNA, complete genome 237823-237855 9 0.727
NZ_CP011381_4 4.115|824029|33|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR 824029-824061 33 LT603033 Escherichia phage vB_Eco_slurp01 genome assembly, chromosome: I 182831-182863 9 0.727
NZ_CP011381_4 4.115|824029|33|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR 824029-824061 33 KM507819 Escherichia phage 121Q, complete genome 238921-238953 9 0.727
NZ_CP011381_3 3.8|472586|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 472586-472619 34 NZ_CP012477 Arthrobacter sp. ERGS1:01 isolate water plasmid unnamed2, complete sequence 725508-725541 10 0.706
NZ_CP011381_4 4.14|817363|33|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 817363-817395 33 MK972699 Salmonella phage SS9, complete genome 91084-91116 10 0.697
NZ_CP011381_4 4.14|817363|33|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 817363-817395 33 MK972698 Salmonella phage SS3, complete genome 47100-47132 10 0.697
NZ_CP011381_4 4.44|819345|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 819345-819378 34 NZ_CP042265 Litoreibacter sp. LN3S51 plasmid unnamed4, complete sequence 505544-505577 10 0.706
NZ_CP011381_4 4.59|820337|33|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 820337-820369 33 NC_018878 Bacillus thuringiensis Bt407 plasmid BTB_502p, complete sequence 346479-346511 10 0.697
NZ_CP011381_4 4.59|820337|33|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 820337-820369 33 AP013974 Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C7-MedDCM-OCT-S24-C102, *** SEQUENCING IN PROGRESS *** 16236-16268 10 0.697
NZ_CP011381_4 4.77|821523|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 821523-821556 34 NZ_CP042265 Litoreibacter sp. LN3S51 plasmid unnamed4, complete sequence 505544-505577 10 0.706
NZ_CP011381_4 4.91|822450|33|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR 822450-822482 33 NC_018878 Bacillus thuringiensis Bt407 plasmid BTB_502p, complete sequence 346479-346511 10 0.697
NZ_CP011381_4 4.91|822450|33|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR 822450-822482 33 AP013974 Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C7-MedDCM-OCT-S24-C102, *** SEQUENCING IN PROGRESS *** 16236-16268 10 0.697
NZ_CP011381_3 3.8|472586|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 472586-472619 34 NZ_CP040266 Escherichia coli strain 631 plasmid pEc631_3, complete sequence 28827-28860 11 0.676
NZ_CP011381_4 4.71|821127|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 821127-821160 34 NC_014031 Bacillus megaterium QM B1551 plasmid pBM600, complete sequence 9127-9160 11 0.676
NZ_CP011381_4 4.71|821127|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT 821127-821160 34 NC_011264 Borrelia duttonii Ly plasmid pl32, complete sequence 12978-13011 11 0.676
NZ_CP011381_4 4.103|823240|34|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR 823240-823273 34 NC_014031 Bacillus megaterium QM B1551 plasmid pBM600, complete sequence 9127-9160 11 0.676
NZ_CP011381_4 4.103|823240|34|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR 823240-823273 34 NC_011264 Borrelia duttonii Ly plasmid pl32, complete sequence 12978-13011 11 0.676
NZ_CP011381_4 4.115|824029|33|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR 824029-824061 33 MN693719 Marine virus AFVG_250M1014, complete genome 20906-20938 11 0.667

1. spacer 4.54|820005|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to KR093652 (Moraxella phage Mcat28, complete genome) position: , mismatch: 1, identity: 0.971

atcggttttgcattcggctaaggatttgggtgta	CRISPR spacer
atcggttttgcaatcggctaaggatttgggtgta	Protospacer
************ *********************

2. spacer 4.86|822118|34|NZ_CP011381|CRISPRCasFinder,CRT matches to KR093652 (Moraxella phage Mcat28, complete genome) position: , mismatch: 1, identity: 0.971

atcggttttgcattcggctaaggatttgggtgta	CRISPR spacer
atcggttttgcaatcggctaaggatttgggtgta	Protospacer
************ *********************

3. spacer 2.1|452209|33|NZ_CP011381|CRISPRCasFinder,CRT matches to NZ_CP011375 (Moraxella bovoculi strain 58069 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.939

tttgaaggctggatcaagggcaaccttggtaaa	CRISPR spacer
tttgaaggctggattaaaggcaaccttggtaaa	Protospacer
**************.**.***************

4. spacer 5.2|846286|25|NZ_CP011381|PILER-CR matches to NC_008243 (Chelativorans sp. BNC1 plasmid 2, complete sequence) position: , mismatch: 3, identity: 0.88

gcgtttgggtgcgggcggtacgcca	CRISPR spacer
gcgtttgggtgcgggcgttatgcct	Protospacer
***************** **.*** 

5. spacer 1.12|52693|28|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015007 (Aminobacter aminovorans strain KCTC 2477 plasmid pAA02, complete sequence) position: , mismatch: 4, identity: 0.857

atggcgattgggcgataccagccaagcg	CRISPR spacer
cttgcgattgggctatgccagccaagcg	Protospacer
 * ********** **.***********

6. spacer 1.4|52185|30|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR matches to NC_025249 (Lactococcus lactis subsp. cremoris MG1363 plasmid pFI430, complete sequence) position: , mismatch: 5, identity: 0.833

aatgagcattgaaagtttttgcgccacttc	CRISPR spacer
aataatttttgaaagtttttccgccacttc	Protospacer
***.* . ************ *********

7. spacer 1.8|52438|29|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR matches to LR025196 (Escherichia phage vB_Eco_SLUR63 genome assembly, complete genome: monopartite) position: , mismatch: 5, identity: 0.828

tgatgtatgttggggttttaagc-tcgctc	CRISPR spacer
tgatgtattttggtgttttaagcattgca-	Protospacer
******** **** ********* *.**  

8. spacer 1.8|52438|29|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR matches to LR025197 (Escherichia phage vB_Eco_SLUR75 genome assembly, complete genome: monopartite) position: , mismatch: 5, identity: 0.828

tgatgtatgttggggttttaagc-tcgctc	CRISPR spacer
tgatgtattttggtgttttaagcattgca-	Protospacer
******** **** ********* *.**  

9. spacer 1.8|52438|29|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR matches to LT907986 (Escherichia phage vB_Eco_SLUR25 genome assembly, complete genome: monopartite) position: , mismatch: 5, identity: 0.828

tgatgtatgttggggttttaagc-tcgctc	CRISPR spacer
tgatgtattttggtgttttaagcattgca-	Protospacer
******** **** ********* *.**  

10. spacer 1.8|52438|29|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR matches to MK672798 (Escherichia phage Skure, complete genome) position: , mismatch: 5, identity: 0.828

tgatgtatgttggggttttaagc-tcgctc	CRISPR spacer
tgatgtattttggtgttttaagcattgca-	Protospacer
******** **** ********* *.**  

11. spacer 1.8|52438|29|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR matches to NC_028831 (Escherichia phage slur01, complete genome) position: , mismatch: 5, identity: 0.828

tgatgtatgttggggttttaagc-tcgctc	CRISPR spacer
tgatgtattttggtgttttaagcattgca-	Protospacer
******** **** ********* *.**  

12. spacer 1.8|52438|29|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR matches to KM236243 (Escherichia phage Seurat, complete genome) position: , mismatch: 5, identity: 0.828

tgatgtatgttggggttttaagc-tcgctc	CRISPR spacer
tgatgtattttggtgttttaagcattgca-	Protospacer
******** **** ********* *.**  

13. spacer 1.8|52438|29|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR matches to KP064094 (Enterobacteria phage CAjan, complete genome) position: , mismatch: 5, identity: 0.828

tgatgtatgttggggttttaagc-tcgctc	CRISPR spacer
tgatgtattttggtgttttaagcattgca-	Protospacer
******** **** ********* *.**  

14. spacer 1.8|52438|29|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR matches to KX534337 (Escherichia phage Greed, partial genome) position: , mismatch: 5, identity: 0.828

tgatgtatgttggggttttaagc-tcgctc	CRISPR spacer
tgatgtattttggtgttttaagcattgca-	Protospacer
******** **** ********* *.**  

15. spacer 1.8|52438|29|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR matches to LR025195 (Escherichia phage vB_Eco_SLUR76 genome assembly, complete genome: monopartite) position: , mismatch: 5, identity: 0.828

tgatgtatgttggggttttaagc-tcgctc	CRISPR spacer
tgatgtattttggtgttttaagcattgca-	Protospacer
******** **** ********* *.**  

16. spacer 1.8|52438|29|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR matches to LR025198 (Escherichia phage vB_Eco_SLUR26 genome assembly, complete genome: monopartite) position: , mismatch: 5, identity: 0.828

tgatgtatgttggggttttaagc-tcgctc	CRISPR spacer
tgatgtattttggtgttttaagcattgca-	Protospacer
******** **** ********* *.**  

17. spacer 1.13|52757|28|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021824 (Sinorhizobium meliloti strain KH46 plasmid psymA, complete sequence) position: , mismatch: 5, identity: 0.821

attgtcattttttggtgttgctctaggc	CRISPR spacer
ctgctcattttttggaattgctctaggc	Protospacer
 *  *********** .***********

18. spacer 1.14|52821|27|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP028969 (Aminobacter sp. MSH1 plasmid pUSP1, complete sequence) position: , mismatch: 5, identity: 0.815

acgaaataagcgatgacgacgagctaa	CRISPR spacer
acacgatatgcgatgacgacgagctac	Protospacer
**. .*** ***************** 

19. spacer 1.14|52821|27|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026266 (Aminobacter sp. MSH1 plasmid pAM01, complete sequence) position: , mismatch: 5, identity: 0.815

acgaaataagcgatgacgacgagctaa	CRISPR spacer
acacgatatgcgatgacgacgagctac	Protospacer
**. .*** ***************** 

20. spacer 1.18|53073|27|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045273 (Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence) position: , mismatch: 5, identity: 0.815

aagggctttttatgtattggctcttat	CRISPR spacer
aagggctttttatgtatttgcttggtt	Protospacer
****************** ***.   *

21. spacer 5.4|846283|31|NZ_CP011381|CRISPRCasFinder matches to NC_008243 (Chelativorans sp. BNC1 plasmid 2, complete sequence) position: , mismatch: 5, identity: 0.839

gcgtttgggtgcgggcggtacgccaaggcaa-	CRISPR spacer
gcgtttgggtgcgggcgttatgcc-tggcatc	Protospacer
***************** **.***  ****  

22. spacer 1.3|52121|28|NZ_CP011381|CRISPRCasFinder,CRT matches to NZ_CP032678 (Pseudomonas sp. Leaf58 plasmid pBASL58, complete sequence) position: , mismatch: 6, identity: 0.786

cgtgtgtaagcttgattgctgccgacgt	CRISPR spacer
ccccggtaagctggatagctgccgacgt	Protospacer
* .  ******* *** ***********

23. spacer 1.13|52757|28|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP004389 (Thalassospira xiamenensis M-5 = DSM 17429 strain M-5 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.786

attgtcattttttggtgttgctctaggc	CRISPR spacer
tttgtcattttttggtgcggctcttgat	Protospacer
 ****************. ***** *..

24. spacer 1.13|52757|28|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR matches to NC_010474 (Synechococcus sp. PCC 7002 plasmid pAQ7, complete sequence) position: , mismatch: 6, identity: 0.786

attgtcattttttggtgt---tgctctaggc	CRISPR spacer
gttgttattttttggtgttgctgctcca---	Protospacer
.****.************   *****.*   

25. spacer 1.13|52757|28|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016489 (Synechococcus sp. PCC 8807 plasmid unnamed6, complete sequence) position: , mismatch: 6, identity: 0.786

attgtcattttttggtgt---tgctctaggc	CRISPR spacer
gttgttattttttggtgttgctgctcca---	Protospacer
.****.************   *****.*   

26. spacer 1.14|52821|27|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP019820 (Enterobacter hormaechei subsp. hoffmannii strain OIPH-N069 plasmid pN069_3, complete sequence) position: , mismatch: 6, identity: 0.778

acgaaataagcgatgacgacgagctaa	CRISPR spacer
atgaaataagcgatgacgccgaggagc	Protospacer
*.**************** ****  . 

27. spacer 2.2|452278|32|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR matches to KP869112 (Escherichia coli O157 typing phage 14, partial genome) position: , mismatch: 6, identity: 0.812

gtacaagatgcaggtattcgccaagagcgtgc-	CRISPR spacer
atgcaagatccaggtattcgtcaagaac-tgca	Protospacer
.*.****** **********.*****.* *** 

28. spacer 2.2|452278|32|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR matches to NC_022323 (Escherichia phage 2 JES-2013, complete genome) position: , mismatch: 6, identity: 0.812

gtacaagatgcaggtattcgccaagagcgtgc-	CRISPR spacer
atgcaagatccaggtattcgtcaagaac-tgca	Protospacer
.*.****** **********.*****.* *** 

29. spacer 2.2|452278|32|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR matches to MH752840 (Escherichia phage vB_EcoM-Pr121LW, complete genome) position: , mismatch: 6, identity: 0.812

gtacaagatgcaggtattcgccaagagcgtgc-	CRISPR spacer
atgcaagatccaggtattcgtcaagaac-tgca	Protospacer
.*.****** **********.*****.* *** 

30. spacer 2.2|452278|32|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR matches to KP869102 (Escherichia coli O157 typing phage 4, partial genome) position: , mismatch: 6, identity: 0.812

gtacaagatgcaggtattcgccaagagcgtgc-	CRISPR spacer
atgcaagatccaggtattcgtcaagaac-tgca	Protospacer
.*.****** **********.*****.* *** 

31. spacer 2.2|452278|32|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR matches to MN850642 (Escherichia phage navn, complete genome) position: , mismatch: 6, identity: 0.812

gtacaagatgcaggtattcgccaagagcgtgc-	CRISPR spacer
atgcaagatccaggtattcgtcaagaac-tgca	Protospacer
.*.****** **********.*****.* *** 

32. spacer 2.2|452278|32|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR matches to MN850627 (Escherichia phage pangalan, complete genome) position: , mismatch: 6, identity: 0.812

gtacaagatgcaggtattcgccaagagcgtgc-	CRISPR spacer
atgcaagatccaggtattcgtcaagaac-tgca	Protospacer
.*.****** **********.*****.* *** 

33. spacer 4.44|819345|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP043499 (Rhizobium grahamii strain BG7 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.824

atgcgctgaccgccatggatgtcgcggcggtgac-	CRISPR spacer
atgcgctgaccgccaaggatgtcg-agtggtcgct	Protospacer
*************** ******** .*.*** .* 

34. spacer 4.77|821523|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP043499 (Rhizobium grahamii strain BG7 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.824

atgcgctgaccgccatggatgtcgcggcggtgac-	CRISPR spacer
atgcgctgaccgccaaggatgtcg-agtggtcgct	Protospacer
*************** ******** .*.*** .* 

35. spacer 1.8|52438|29|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR134403 (Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence) position: , mismatch: 7, identity: 0.759

tgatgtatgttggggttttaagctcgctc	CRISPR spacer
agatgtttgttgggcttttaagctatgta	Protospacer
 ***** ******* *********   * 

36. spacer 1.8|52438|29|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR matches to NC_010474 (Synechococcus sp. PCC 7002 plasmid pAQ7, complete sequence) position: , mismatch: 7, identity: 0.759

tgatgtatgttggggttttaagctcgctc	CRISPR spacer
aggaagatgatggggttttaagcttgctc	Protospacer
 *. . *** **************.****

37. spacer 1.8|52438|29|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014003 (Synechococcus sp. PCC 73109 plasmid unnamed5, complete sequence) position: , mismatch: 7, identity: 0.759

tgatgtatgttggggttttaagctcgctc	CRISPR spacer
aggaagatgatggggttttaagcttgctc	Protospacer
 *. . *** **************.****

38. spacer 1.8|52438|29|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016489 (Synechococcus sp. PCC 8807 plasmid unnamed6, complete sequence) position: , mismatch: 7, identity: 0.759

tgatgtatgttggggttttaagctcgctc	CRISPR spacer
aggaagatgatggggttttaagcttgctc	Protospacer
 *. . *** **************.****

39. spacer 1.8|52438|29|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016482 (Synechococcus sp. PCC 7117 plasmid unnamed5, complete sequence) position: , mismatch: 7, identity: 0.759

tgatgtatgttggggttttaagctcgctc	CRISPR spacer
aggaagatgatggggttttaagcttgctc	Protospacer
 *. . *** **************.****

40. spacer 2.4|452415|33|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR matches to KF929199 (Staphylococcus phage vB_SepS_SEP9, complete genome) position: , mismatch: 7, identity: 0.788

tcttaaaaacttcctataccgtatt----cataatag	CRISPR spacer
cctaaaaaacttcctatacagtattataccata----	Protospacer
.** *************** *****    ****    

41. spacer 2.13|453037|34|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR matches to AP014258 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S27-C55, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 7, identity: 0.794

agcctac-ccagaacacagtaaaacaacaacaaca	CRISPR spacer
-gcatataatagaccacagtacaacaacaacaaca	Protospacer
 ** **.  .*** ******* *************

42. spacer 2.13|453037|34|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR matches to MH616856 (Microviridae sp. isolate ctcg971, complete genome) position: , mismatch: 8, identity: 0.765

agcctacccagaacacagtaaaacaacaacaaca	CRISPR spacer
aatgaaaacagaaaacagaaaaacaacaacaaca	Protospacer
*..  *  ***** **** ***************

43. spacer 3.11|472793|33|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050084 (Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b2, complete sequence) position: , mismatch: 8, identity: 0.758

accgcttcaatctctgcttctgttggcttgtga	CRISPR spacer
cctgcaccaatctctgctgcttttggcttgttg	Protospacer
 *.** .*********** ** ********* .

44. spacer 3.11|472793|33|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030762 (Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.758

accgcttcaatctctgcttctgttggcttgtga	CRISPR spacer
cctgcaccaatctctgctgcttttggcttgttg	Protospacer
 *.** .*********** ** ********* .

45. spacer 3.11|472793|33|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053209 (Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1A, complete sequence) position: , mismatch: 8, identity: 0.758

accgcttcaatctctgcttctgttggcttgtga	CRISPR spacer
cctgcaccaatctctgctgcttttggcttgttg	Protospacer
 *.** .*********** ** ********* .

46. spacer 4.2|816574|33|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049734 (Rhizobium leguminosarum strain A1 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.758

tgccattgccttgccagcttcttcggccgtgat	CRISPR spacer
ctcggctgccttgcgagcttcttcggcagtgac	Protospacer
. * ..******** ************ ****.

47. spacer 4.2|816574|33|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to CP049734 (Rhizobium leguminosarum strain A1 plasmid pRLa11, complete sequence) position: , mismatch: 8, identity: 0.758

tgccattgccttgccagcttcttcggccgtgat	CRISPR spacer
ctcggctgccttgcgagcttcttcggcagtgac	Protospacer
. * ..******** ************ ****.

48. spacer 4.2|816574|33|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054035 (Rhizobium sp. JKLM13E plasmid pPR13E04, complete sequence) position: , mismatch: 8, identity: 0.758

tgccattgccttgccagcttcttcggccgtgat	CRISPR spacer
ctcggctgccttgcgagcttcttcggcagtgac	Protospacer
. * ..******** ************ ****.

49. spacer 4.2|816574|33|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054024 (Rhizobium sp. JKLM12A2 plasmid pPR12A203, complete sequence) position: , mismatch: 8, identity: 0.758

tgccattgccttgccagcttcttcggccgtgat	CRISPR spacer
ctcggctgccttgcgagcttcttcggcagtgac	Protospacer
. * ..******** ************ ****.

50. spacer 4.4|816705|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to MN693498 (Marine virus AFVG_25M563, complete genome) position: , mismatch: 8, identity: 0.765

ttaatcaaaaaattatttgcggttaaaaaagatg	CRISPR spacer
tcaccaaaaaaattgtttgaggttaaaaaatttg	Protospacer
*.* . ********.**** **********  **

51. spacer 4.8|816968|33|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to KR093633 (Moraxella phage Mcat9, complete genome) position: , mismatch: 8, identity: 0.758

tcatcgttgatccaaatccaatgaccgatgaga	CRISPR spacer
tgcccattgatcctaatcccatgaccgatgatc	Protospacer
*  .*.******* ***** ***********  

52. spacer 4.14|817363|33|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to MT074469 (Salmonella phage rabagast, complete genome) position: , mismatch: 8, identity: 0.758

aatcatgccgtacatgatggttttgattttgcc	CRISPR spacer
gttgttgccgtccatgatggttttgaatttttc	Protospacer
. *  ****** ************** *** .*

53. spacer 4.14|817363|33|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to MH688040 (Salmonella phage Mooltan, complete genome) position: , mismatch: 8, identity: 0.758

aatcatgccgtacatgatggttttgattttgcc	CRISPR spacer
gttgttgccgtccatgatggttttgaatttttc	Protospacer
. *  ****** ************** *** .*

54. spacer 4.14|817363|33|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to LR811967 (Salmonella phage Se_EM1 genome assembly, chromosome: 1) position: , mismatch: 8, identity: 0.758

aatcatgccgtacatgatggttttgattttgcc	CRISPR spacer
gttgttgccgtccatgatggttttgaatttttc	Protospacer
. *  ****** ************** *** .*

55. spacer 4.14|817363|33|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to MH427377 (Escherichia phage vB_EcoM Sa157lw, complete genome) position: , mismatch: 8, identity: 0.758

aatcatgccgtacatgatggttttgattttgcc	CRISPR spacer
gttgttgccgtccatgatggttttgaatttttc	Protospacer
. *  ****** ************** *** .*

56. spacer 4.14|817363|33|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to MN066127 (Salmonella phage Matapan, complete genome) position: , mismatch: 8, identity: 0.758

aatcatgccgtacatgatggttttgattttgcc	CRISPR spacer
gttgttgccgtccatgatggttttgaatttttc	Protospacer
. *  ****** ************** *** .*

57. spacer 4.14|817363|33|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to MH940212 (Salmonella phage PS5, complete genome) position: , mismatch: 8, identity: 0.758

aatcatgccgtacatgatggttttgattttgcc	CRISPR spacer
gttgttgccgtccatgatggttttgaatttttc	Protospacer
. *  ****** ************** *** .*

58. spacer 4.14|817363|33|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to MT974436 (Salmonella phage ISTP3, complete genome) position: , mismatch: 8, identity: 0.758

aatcatgccgtacatgatggttttgattttgcc	CRISPR spacer
gttgttgccgtccatgatggttttgaatttttc	Protospacer
. *  ****** ************** *** .*

59. spacer 4.14|817363|33|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to NC_016570 (Escherichia phage vB_EcoM_CBA120, complete genome) position: , mismatch: 8, identity: 0.758

aatcatgccgtacatgatggttttgattttgcc	CRISPR spacer
gttgttgccgtccatgatggttttgaatttttc	Protospacer
. *  ****** ************** *** .*

60. spacer 4.14|817363|33|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to MH370371 (Salmonella phage S118, complete genome) position: , mismatch: 8, identity: 0.758

aatcatgccgtacatgatggttttgattttgcc	CRISPR spacer
gttgttgccgtccatgatggttttgaatttttc	Protospacer
. *  ****** ************** *** .*

61. spacer 4.14|817363|33|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to JN593240 (Escherichia virus CBA120, complete genome) position: , mismatch: 8, identity: 0.758

aatcatgccgtacatgatggttttgattttgcc	CRISPR spacer
gttgttgccgtccatgatggttttgaatttttc	Protospacer
. *  ****** ************** *** .*

62. spacer 4.14|817363|33|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to JN673056 (Escherichia phage PhaxI, complete genome) position: , mismatch: 8, identity: 0.758

aatcatgccgtacatgatggttttgattttgcc	CRISPR spacer
gttgttgccgtccatgatggttttgaatttttc	Protospacer
. *  ****** ************** *** .*

63. spacer 4.14|817363|33|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to MH370368 (Salmonella phage S115, complete genome) position: , mismatch: 8, identity: 0.758

aatcatgccgtacatgatggttttgattttgcc	CRISPR spacer
gttgttgccgtccatgatggttttgaatttttc	Protospacer
. *  ****** ************** *** .*

64. spacer 4.20|817761|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to CP054460 (Escherichia coli strain SCU-103 plasmid pSCU-103-3) position: , mismatch: 8, identity: 0.765

catgacacacgccacgaagccatcagccgatttg	CRISPR spacer
cacgatctccgtcatgaagccatcagccgatttt	Protospacer
**.**. . **.**.****************** 

65. spacer 4.20|817761|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033883 (Escherichia coli strain 50579417 plasmid p50579417_2, complete sequence) position: , mismatch: 8, identity: 0.765

catgacacacgccacgaagccatcagccgatttg	CRISPR spacer
cacgatctccgtcatgaagccatcagccgatttt	Protospacer
**.**. . **.**.****************** 

66. spacer 4.20|817761|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to CP027378 (Escherichia coli strain 2013C-4404 plasmid unnamed2) position: , mismatch: 8, identity: 0.765

catgacacacgccacgaagccatcagccgatttg	CRISPR spacer
cacgatctccgtcatgaagccatcagccgatttt	Protospacer
**.**. . **.**.****************** 

67. spacer 4.20|817761|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LT985278 (Escherichia coli strain 499 plasmid RCS68_p, complete sequence) position: , mismatch: 8, identity: 0.765

catgacacacgccacgaagccatcagccgatttg	CRISPR spacer
cacgatctccgtcatgaagccatcagccgatttt	Protospacer
**.**. . **.**.****************** 

68. spacer 4.20|817761|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MG299151 (Shigella sonnei strain SH287-2 plasmid pSH287-2, complete sequence) position: , mismatch: 8, identity: 0.765

catgacacacgccacgaagccatcagccgatttg	CRISPR spacer
cacgatctccgtcatgaagccatcagccgatttt	Protospacer
**.**. . **.**.****************** 

69. spacer 4.20|817761|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KY471628 (Shigella sonnei strain SH15sh99 plasmid pSH15sh99, complete sequence) position: , mismatch: 8, identity: 0.765

catgacacacgccacgaagccatcagccgatttg	CRISPR spacer
cacgatctccgtcatgaagccatcagccgatttt	Protospacer
**.**. . **.**.****************** 

70. spacer 4.20|817761|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MG299131 (Shigella sonnei strain SH271-2 plasmid pSH271-2, complete sequence) position: , mismatch: 8, identity: 0.765

catgacacacgccacgaagccatcagccgatttg	CRISPR spacer
cacgatctccgtcatgaagccatcagccgatttt	Protospacer
**.**. . **.**.****************** 

71. spacer 4.20|817761|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KY471629 (Shigella sonnei strain SH15sh105 plasmid pSH15sh104, complete sequence) position: , mismatch: 8, identity: 0.765

catgacacacgccacgaagccatcagccgatttg	CRISPR spacer
cacgatctccgtcatgaagccatcagccgatttt	Protospacer
**.**. . **.**.****************** 

72. spacer 4.20|817761|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MG299133 (Shigella sonnei strain SH272-2 plasmid pSH272-2, complete sequence) position: , mismatch: 8, identity: 0.765

catgacacacgccacgaagccatcagccgatttg	CRISPR spacer
cacgatctccgtcatgaagccatcagccgatttt	Protospacer
**.**. . **.**.****************** 

73. spacer 4.20|817761|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025625 (Escherichia coli strain SCEC020007 plasmid pBOKZ_020007, complete sequence) position: , mismatch: 8, identity: 0.765

catgacacacgccacgaagccatcagccgatttg	CRISPR spacer
cacgatctccgtcatgaagccatcagccgatttt	Protospacer
**.**. . **.**.****************** 

74. spacer 4.20|817761|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MG299128 (Shigella sonnei strain SH262-2 plasmid pSH262-2, complete sequence) position: , mismatch: 8, identity: 0.765

catgacacacgccacgaagccatcagccgatttg	CRISPR spacer
cacgatctccgtcatgaagccatcagccgatttt	Protospacer
**.**. . **.**.****************** 

75. spacer 4.20|817761|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MG299147 (Shigella sonnei strain SH284-2 plasmid pSH284-2, complete sequence) position: , mismatch: 8, identity: 0.765

catgacacacgccacgaagccatcagccgatttg	CRISPR spacer
cacgatctccgtcatgaagccatcagccgatttt	Protospacer
**.**. . **.**.****************** 

76. spacer 4.20|817761|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053733 (Escherichia coli strain CP55_Sichuan plasmid pCP55-141k, complete sequence) position: , mismatch: 8, identity: 0.765

catgacacacgccacgaagccatcagccgatttg	CRISPR spacer
cacgatctccgtcatgaagccatcagccgatttt	Protospacer
**.**. . **.**.****************** 

77. spacer 4.20|817761|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009052 (Escherichia coli NCCP15648 plasmid p15648-2, complete sequence) position: , mismatch: 8, identity: 0.765

catgacacacgccacgaagccatcagccgatttg	CRISPR spacer
cacgatctccgtcatgaagccatcagccgatttt	Protospacer
**.**. . **.**.****************** 

78. spacer 4.20|817761|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024887 (Escherichia coli strain AR_0017 plasmid unitig_1_pilon, complete sequence) position: , mismatch: 8, identity: 0.765

catgacacacgccacgaagccatcagccgatttg	CRISPR spacer
cacgatctccgtcatgaagccatcagccgatttt	Protospacer
**.**. . **.**.****************** 

79. spacer 4.20|817761|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to NC_014477 (Escherichia coli plasmid pCT, complete sequence) position: , mismatch: 8, identity: 0.765

catgacacacgccacgaagccatcagccgatttg	CRISPR spacer
cacgatctccgtcatgaagccatcagccgatttt	Protospacer
**.**. . **.**.****************** 

80. spacer 4.20|817761|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP051720 (Escherichia coli strain SCU-116 plasmid pSCU-116-1, complete sequence) position: , mismatch: 8, identity: 0.765

catgacacacgccacgaagccatcagccgatttg	CRISPR spacer
cacgatctccgtcatgaagccatcagccgatttt	Protospacer
**.**. . **.**.****************** 

81. spacer 4.20|817761|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027324 (Escherichia coli strain 2013C-3033 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.765

catgacacacgccacgaagccatcagccgatttg	CRISPR spacer
cacgatctccgtcatgaagccatcagccgatttt	Protospacer
**.**. . **.**.****************** 

82. spacer 4.20|817761|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to NC_011754 (Escherichia coli ED1a plasmid pECOED, complete sequence) position: , mismatch: 8, identity: 0.765

catgacacacgccacgaagccatcagccgatttg	CRISPR spacer
cacgatctccgtcatgaagccatcagccgatttt	Protospacer
**.**. . **.**.****************** 

83. spacer 4.20|817761|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LT985270 (Escherichia coli strain 716 plasmid RCS56_p, complete sequence) position: , mismatch: 8, identity: 0.765

catgacacacgccacgaagccatcagccgatttg	CRISPR spacer
cacgatctccgtcatgaagccatcagccgatttt	Protospacer
**.**. . **.**.****************** 

84. spacer 4.22|817892|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MG299151 (Shigella sonnei strain SH287-2 plasmid pSH287-2, complete sequence) position: , mismatch: 8, identity: 0.765

atgacacacgccacgaagccatcagccgatttgt	CRISPR spacer
acgatctccgtcatgaagccatcagccgattttt	Protospacer
*.**. . **.**.****************** *

85. spacer 4.22|817892|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KY471628 (Shigella sonnei strain SH15sh99 plasmid pSH15sh99, complete sequence) position: , mismatch: 8, identity: 0.765

atgacacacgccacgaagccatcagccgatttgt	CRISPR spacer
acgatctccgtcatgaagccatcagccgattttt	Protospacer
*.**. . **.**.****************** *

86. spacer 4.22|817892|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MG299131 (Shigella sonnei strain SH271-2 plasmid pSH271-2, complete sequence) position: , mismatch: 8, identity: 0.765

atgacacacgccacgaagccatcagccgatttgt	CRISPR spacer
acgatctccgtcatgaagccatcagccgattttt	Protospacer
*.**. . **.**.****************** *

87. spacer 4.22|817892|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KY471629 (Shigella sonnei strain SH15sh105 plasmid pSH15sh104, complete sequence) position: , mismatch: 8, identity: 0.765

atgacacacgccacgaagccatcagccgatttgt	CRISPR spacer
acgatctccgtcatgaagccatcagccgattttt	Protospacer
*.**. . **.**.****************** *

88. spacer 4.22|817892|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MG299133 (Shigella sonnei strain SH272-2 plasmid pSH272-2, complete sequence) position: , mismatch: 8, identity: 0.765

atgacacacgccacgaagccatcagccgatttgt	CRISPR spacer
acgatctccgtcatgaagccatcagccgattttt	Protospacer
*.**. . **.**.****************** *

89. spacer 4.22|817892|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025625 (Escherichia coli strain SCEC020007 plasmid pBOKZ_020007, complete sequence) position: , mismatch: 8, identity: 0.765

atgacacacgccacgaagccatcagccgatttgt	CRISPR spacer
acgatctccgtcatgaagccatcagccgattttt	Protospacer
*.**. . **.**.****************** *

90. spacer 4.22|817892|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MG299128 (Shigella sonnei strain SH262-2 plasmid pSH262-2, complete sequence) position: , mismatch: 8, identity: 0.765

atgacacacgccacgaagccatcagccgatttgt	CRISPR spacer
acgatctccgtcatgaagccatcagccgattttt	Protospacer
*.**. . **.**.****************** *

91. spacer 4.22|817892|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MG299147 (Shigella sonnei strain SH284-2 plasmid pSH284-2, complete sequence) position: , mismatch: 8, identity: 0.765

atgacacacgccacgaagccatcagccgatttgt	CRISPR spacer
acgatctccgtcatgaagccatcagccgattttt	Protospacer
*.**. . **.**.****************** *

92. spacer 4.22|817892|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053733 (Escherichia coli strain CP55_Sichuan plasmid pCP55-141k, complete sequence) position: , mismatch: 8, identity: 0.765

atgacacacgccacgaagccatcagccgatttgt	CRISPR spacer
acgatctccgtcatgaagccatcagccgattttt	Protospacer
*.**. . **.**.****************** *

93. spacer 4.22|817892|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009052 (Escherichia coli NCCP15648 plasmid p15648-2, complete sequence) position: , mismatch: 8, identity: 0.765

atgacacacgccacgaagccatcagccgatttgt	CRISPR spacer
acgatctccgtcatgaagccatcagccgattttt	Protospacer
*.**. . **.**.****************** *

94. spacer 4.22|817892|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024887 (Escherichia coli strain AR_0017 plasmid unitig_1_pilon, complete sequence) position: , mismatch: 8, identity: 0.765

atgacacacgccacgaagccatcagccgatttgt	CRISPR spacer
acgatctccgtcatgaagccatcagccgattttt	Protospacer
*.**. . **.**.****************** *

95. spacer 4.22|817892|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to NC_014477 (Escherichia coli plasmid pCT, complete sequence) position: , mismatch: 8, identity: 0.765

atgacacacgccacgaagccatcagccgatttgt	CRISPR spacer
acgatctccgtcatgaagccatcagccgattttt	Protospacer
*.**. . **.**.****************** *

96. spacer 4.22|817892|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP051720 (Escherichia coli strain SCU-116 plasmid pSCU-116-1, complete sequence) position: , mismatch: 8, identity: 0.765

atgacacacgccacgaagccatcagccgatttgt	CRISPR spacer
acgatctccgtcatgaagccatcagccgattttt	Protospacer
*.**. . **.**.****************** *

97. spacer 4.22|817892|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027324 (Escherichia coli strain 2013C-3033 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.765

atgacacacgccacgaagccatcagccgatttgt	CRISPR spacer
acgatctccgtcatgaagccatcagccgattttt	Protospacer
*.**. . **.**.****************** *

98. spacer 4.22|817892|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to CP054460 (Escherichia coli strain SCU-103 plasmid pSCU-103-3) position: , mismatch: 8, identity: 0.765

atgacacacgccacgaagccatcagccgatttgt	CRISPR spacer
acgatctccgtcatgaagccatcagccgattttt	Protospacer
*.**. . **.**.****************** *

99. spacer 4.22|817892|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to NC_011754 (Escherichia coli ED1a plasmid pECOED, complete sequence) position: , mismatch: 8, identity: 0.765

atgacacacgccacgaagccatcagccgatttgt	CRISPR spacer
acgatctccgtcatgaagccatcagccgattttt	Protospacer
*.**. . **.**.****************** *

100. spacer 4.22|817892|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033883 (Escherichia coli strain 50579417 plasmid p50579417_2, complete sequence) position: , mismatch: 8, identity: 0.765

atgacacacgccacgaagccatcagccgatttgt	CRISPR spacer
acgatctccgtcatgaagccatcagccgattttt	Protospacer
*.**. . **.**.****************** *

101. spacer 4.22|817892|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to CP027378 (Escherichia coli strain 2013C-4404 plasmid unnamed2) position: , mismatch: 8, identity: 0.765

atgacacacgccacgaagccatcagccgatttgt	CRISPR spacer
acgatctccgtcatgaagccatcagccgattttt	Protospacer
*.**. . **.**.****************** *

102. spacer 4.22|817892|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LT985270 (Escherichia coli strain 716 plasmid RCS56_p, complete sequence) position: , mismatch: 8, identity: 0.765

atgacacacgccacgaagccatcagccgatttgt	CRISPR spacer
acgatctccgtcatgaagccatcagccgattttt	Protospacer
*.**. . **.**.****************** *

103. spacer 4.22|817892|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LT985278 (Escherichia coli strain 499 plasmid RCS68_p, complete sequence) position: , mismatch: 8, identity: 0.765

atgacacacgccacgaagccatcagccgatttgt	CRISPR spacer
acgatctccgtcatgaagccatcagccgattttt	Protospacer
*.**. . **.**.****************** *

104. spacer 4.71|821127|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018173 (Calothrix sp. NIES-2098 plasmid plasmid1 DNA, complete genome) position: , mismatch: 8, identity: 0.765

aatat-ccattttggttttttgattttgcgccctg	CRISPR spacer
-ttataccattttggattttagattttgcggaaag	Protospacer
  *** ********* **** *********    *

105. spacer 4.103|823240|34|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP018173 (Calothrix sp. NIES-2098 plasmid plasmid1 DNA, complete genome) position: , mismatch: 8, identity: 0.765

aatat-ccattttggttttttgattttgcgccctg	CRISPR spacer
-ttataccattttggattttagattttgcggaaag	Protospacer
  *** ********* **** *********    *

106. spacer 2.2|452278|32|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020372 (Candidatus Thiodictyon syntrophicum strain Cad16T plasmid pTs485, complete sequence) position: , mismatch: 9, identity: 0.719

gtacaagatgcaggtattcgccaagagcgtgc	CRISPR spacer
acgcaagatgcacgtattcgtcaagacctttg	Protospacer
...********* *******.***** * *  

107. spacer 2.11|452899|33|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR matches to NC_007949 (Polaromonas sp. JS666 plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.727

gccttaacagtatttatcatcgtgggcttgccc	CRISPR spacer
ctcaaggccgtattcatcatcgtggtcttgccc	Protospacer
 .*  ..* *****.********** *******

108. spacer 4.2|816574|33|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017943 (Phyllobacterium zundukense strain Tri-48 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.727

tgccattgccttgccagcttcttcggccgtgat	CRISPR spacer
ctcggcggccttgcgagcttcttcggcagtgac	Protospacer
. * .. ******* ************ ****.

109. spacer 4.14|817363|33|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to MN871502 (UNVERIFIED: Salmonella phage SeHz-1, complete genome) position: , mismatch: 9, identity: 0.727

aatcatgccgtacatgatggttttgattttgcc	CRISPR spacer
gtcgttgccgtccatgatggttttgaatttttc	Protospacer
. .  ****** ************** *** .*

110. spacer 4.14|817363|33|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to MT074476 (Salmonella phage kage, complete genome) position: , mismatch: 9, identity: 0.727

aatcatgccgtacatgatggttttgattttgcc	CRISPR spacer
gtcgttgccgtccatgatggttttgaatttttc	Protospacer
. .  ****** ************** *** .*

111. spacer 4.14|817363|33|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to MH791405 (UNVERIFIED: Salmonella phage SeSz-1, complete genome) position: , mismatch: 9, identity: 0.727

aatcatgccgtacatgatggttttgattttgcc	CRISPR spacer
gtcgttgccgtccatgatggttttgaatttttc	Protospacer
. .  ****** ************** *** .*

112. spacer 4.14|817363|33|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to NC_049502 (Salmonella phage bering, complete genome) position: , mismatch: 9, identity: 0.727

aatcatgccgtacatgatggttttgattttgcc	CRISPR spacer
gtcgttgccgtccatgatggttttgaatttttc	Protospacer
. .  ****** ************** *** .*

113. spacer 4.14|817363|33|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to NC_016073 (Salmonella phage SFP10, complete genome) position: , mismatch: 9, identity: 0.727

aatcatgccgtacatgatggttttgattttgcc	CRISPR spacer
gtcgttgccgtccatgatggttttgaatttttc	Protospacer
. .  ****** ************** *** .*

114. spacer 4.14|817363|33|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to KY000003 (Salmonella phage STP07, complete genome) position: , mismatch: 9, identity: 0.727

aatcatgccgtacatgatggttttgattttgcc	CRISPR spacer
gtcgttgccgtccatgatggttttgaatttttc	Protospacer
. .  ****** ************** *** .*

115. spacer 4.14|817363|33|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to NC_031045 (Salmonella phage GG32, complete genome) position: , mismatch: 9, identity: 0.727

aatcatgccgtacatgatggttttgattttgcc	CRISPR spacer
gtcgttgccgtccatgatggttttgaatttttc	Protospacer
. .  ****** ************** *** .*

116. spacer 4.49|819675|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to MF172979 (Erysipelothrix phage phi1605, complete genome) position: , mismatch: 9, identity: 0.735

atcata----cagcttatccttatcccattcgccaagc	CRISPR spacer
----tagggccagtttatccttatcccagtcgccagaa	Protospacer
    **    ***.************** ******.. 

117. spacer 4.71|821127|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to MN693083 (Marine virus AFVG_25M55, complete genome) position: , mismatch: 9, identity: 0.735

aatatccattttggttttttgattttgcgccctg	CRISPR spacer
aatctccattttggttttttgattaataactttt	Protospacer
*** ********************    .*..* 

118. spacer 4.82|821853|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to MF172979 (Erysipelothrix phage phi1605, complete genome) position: , mismatch: 9, identity: 0.735

atcata----cagcttatccttatcccattcgccaagc	CRISPR spacer
----tagggccagtttatccttatcccagtcgccagaa	Protospacer
    **    ***.************** ******.. 

119. spacer 4.103|823240|34|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR matches to MN693083 (Marine virus AFVG_25M55, complete genome) position: , mismatch: 9, identity: 0.735

aatatccattttggttttttgattttgcgccctg	CRISPR spacer
aatctccattttggttttttgattaataactttt	Protospacer
*** ********************    .*..* 

120. spacer 4.113|823897|34|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP040452 (Halomonas sp. PA16-9 plasmid p_unnamed1, complete sequence) position: , mismatch: 9, identity: 0.735

-----gtaaccagccacaaccaagtcattggctttaaca	CRISPR spacer
ttccggt-----gccacacccaagtcattagctttagcg	Protospacer
     **     ****** **********.******.*.

121. spacer 4.115|824029|33|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR matches to NC_027364 (Escherichia phage PBECO 4, complete genome) position: , mismatch: 9, identity: 0.727

tttggtgttaataacaatcttagcgccatttgg	CRISPR spacer
aaagtttctaataacaaacttaacgccatttga	Protospacer
   * * .********* ****.*********.

122. spacer 4.115|824029|33|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR matches to MH383160 (Escherichia phage UB, complete genome) position: , mismatch: 9, identity: 0.727

tttggtgttaataacaatcttagcgccatttgg	CRISPR spacer
aaagtttctaataacaaacttaacgccatttga	Protospacer
   * * .********* ****.*********.

123. spacer 4.115|824029|33|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR matches to LC494302 (Escherichia phage SP27 DNA, complete genome) position: , mismatch: 9, identity: 0.727

tttggtgttaataacaatcttagcgccatttgg	CRISPR spacer
aaagtttctaataacaaacttaacgccatttga	Protospacer
   * * .********* ****.*********.

124. spacer 4.115|824029|33|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR matches to LT603033 (Escherichia phage vB_Eco_slurp01 genome assembly, chromosome: I) position: , mismatch: 9, identity: 0.727

tttggtgttaataacaatcttagcgccatttgg	CRISPR spacer
aaagtttctaataacaaacttaacgccatttga	Protospacer
   * * .********* ****.*********.

125. spacer 4.115|824029|33|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR matches to KM507819 (Escherichia phage 121Q, complete genome) position: , mismatch: 9, identity: 0.727

tttggtgttaataacaatcttagcgccatttgg	CRISPR spacer
aaagtttctaataacaaacttaacgccatttga	Protospacer
   * * .********* ****.*********.

126. spacer 3.8|472586|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012477 (Arthrobacter sp. ERGS1:01 isolate water plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.706

tagattagccgagcaagctgaacaagccatttac	CRISPR spacer
agcggtagccgagcatgctgaacaggccaaagac	Protospacer
 . . ********** ********.****   **

127. spacer 4.14|817363|33|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to MK972699 (Salmonella phage SS9, complete genome) position: , mismatch: 10, identity: 0.697

aatcatgccgtacatgatggttttgattttgcc	CRISPR spacer
gtcgttgccgtccatgatggttttgaattcttc	Protospacer
. .  ****** ************** **. .*

128. spacer 4.14|817363|33|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to MK972698 (Salmonella phage SS3, complete genome) position: , mismatch: 10, identity: 0.697

aatcatgccgtacatgatggttttgattttgcc	CRISPR spacer
gtcgttgccgtccatgatggttttgaattcttc	Protospacer
. .  ****** ************** **. .*

129. spacer 4.44|819345|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042265 (Litoreibacter sp. LN3S51 plasmid unnamed4, complete sequence) position: , mismatch: 10, identity: 0.706

atgcgctgaccgccatggatgtcgcggcggtgac	CRISPR spacer
tcgcgctgaccggcatggttgtcgcgatcctcaa	Protospacer
 .********** ***** *******..  * * 

130. spacer 4.59|820337|33|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to NC_018878 (Bacillus thuringiensis Bt407 plasmid BTB_502p, complete sequence) position: , mismatch: 10, identity: 0.697

aatgccaaaaaaatctttaagctcttttgttcg	CRISPR spacer
gcagaacaaaaaatctttattctcttttgttta	Protospacer
.  *   ************  **********..

131. spacer 4.59|820337|33|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to AP013974 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C7-MedDCM-OCT-S24-C102, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 10, identity: 0.697

aatgccaaaaaaatctttaagctcttttgttcg	CRISPR spacer
aatgccaaaaaattctttaagttcgccgccaag	Protospacer
************ ********.** ..  .  *

132. spacer 4.77|821523|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042265 (Litoreibacter sp. LN3S51 plasmid unnamed4, complete sequence) position: , mismatch: 10, identity: 0.706

atgcgctgaccgccatggatgtcgcggcggtgac	CRISPR spacer
tcgcgctgaccggcatggttgtcgcgatcctcaa	Protospacer
 .********** ***** *******..  * * 

133. spacer 4.91|822450|33|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR matches to NC_018878 (Bacillus thuringiensis Bt407 plasmid BTB_502p, complete sequence) position: , mismatch: 10, identity: 0.697

aatgccaaaaaaatctttaagctcttttgttcg	CRISPR spacer
gcagaacaaaaaatctttattctcttttgttta	Protospacer
.  *   ************  **********..

134. spacer 4.91|822450|33|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR matches to AP013974 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C7-MedDCM-OCT-S24-C102, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 10, identity: 0.697

aatgccaaaaaaatctttaagctcttttgttcg	CRISPR spacer
aatgccaaaaaattctttaagttcgccgccaag	Protospacer
************ ********.** ..  .  *

135. spacer 3.8|472586|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040266 (Escherichia coli strain 631 plasmid pEc631_3, complete sequence) position: , mismatch: 11, identity: 0.676

tagattagccgagcaagctgaacaagccatttac	CRISPR spacer
gcgcgtagccgagcaagttgaaaaagccagcatt	Protospacer
  *  ************.**** ****** .  .

136. spacer 4.71|821127|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to NC_014031 (Bacillus megaterium QM B1551 plasmid pBM600, complete sequence) position: , mismatch: 11, identity: 0.676

aatatccattttggttttttgattttgcgccctg	CRISPR spacer
ataatccatttggtttttttgattttgtaaaact	Protospacer
*  ******** * *************..   . 

137. spacer 4.71|821127|34|NZ_CP011381|PILER-CR,CRISPRCasFinder,CRT matches to NC_011264 (Borrelia duttonii Ly plasmid pl32, complete sequence) position: , mismatch: 11, identity: 0.676

aatatccattttggttttttgattttgcgccctg	CRISPR spacer
tgtagccattttgtttttttgatttttcttaaaa	Protospacer
 .** ******** ************ * .   .

138. spacer 4.103|823240|34|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR matches to NC_014031 (Bacillus megaterium QM B1551 plasmid pBM600, complete sequence) position: , mismatch: 11, identity: 0.676

aatatccattttggttttttgattttgcgccctg	CRISPR spacer
ataatccatttggtttttttgattttgtaaaact	Protospacer
*  ******** * *************..   . 

139. spacer 4.103|823240|34|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR matches to NC_011264 (Borrelia duttonii Ly plasmid pl32, complete sequence) position: , mismatch: 11, identity: 0.676

aatatccattttggttttttgattttgcgccctg	CRISPR spacer
tgtagccattttgtttttttgatttttcttaaaa	Protospacer
 .** ******** ************ * .   .

140. spacer 4.115|824029|33|NZ_CP011381|CRISPRCasFinder,CRT,PILER-CR matches to MN693719 (Marine virus AFVG_250M1014, complete genome) position: , mismatch: 11, identity: 0.667

tttggtgttaataacaatcttagcgccatttgg	CRISPR spacer
aactccattaataaaaatcttagcgccacttcc	Protospacer
  .  ..******* *************.**  

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1195440 : 1204635 10 Acinetobacter_phage(50.0%) NA NA
DBSCAN-SWA_2 1306533 : 1313287 8 Lake_Baikal_phage(33.33%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage