CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP011365	Salmonella enterica subsp. enterica serovar Typhimurium strain FORC_015 chromosome, complete genome	2 crisprs	WYL,DinG,cas3,DEDDh,csa3,PD-DExK,RT	1	15	4	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP011365_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011365_1

3006297-3006996

Orphan

I-E

Consensus_repeat	Method
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRISPRCasFinder
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	PILER-CR

11 spacers

The CRISPR arrays of NZ_CP011365_1

>merge|NZ_CP011365|1|3006297-3006996|CRISPRCasFinder,CRT,PILER-CR
GTGTTTATCCCCGCTGGCGCGGGGAACACGGGGTTAATCGATTCCATATTTACCACAAAGACGGTTTATCCCCGCTGGCGCGGGGAACACGGCCGATGGGCGGATATCCAGGCGTTGTGCGACGGTTTATCCCCGCTGGCGCGGGGAACACTGGCGATAATGTACGACGAGTTGCCAAAATATCGGTTTATCCCCGCTGACGCGGGGAACACAGTTACACCGACAGCCGTAACCCGTTCGATATCGGTTTATCCCCGCTGGCGCGGGGAACACTCTTTTGCAATTTACTTCAGCAATTCTGGTTTCGGTTTATCCCCGCTGGCGCGGGGAACACTCCGTGAAACTGACCATTGGAATGGTCCCAATCGGTTTATCCCCGCTGGCGCGGGGAACACAGATCCGGCAGCCGGGAAAATTTATTGAGAACCGGTTTATCCCCGCTGGCGCGGGGAACACTATCCTGCGCAATTCACGACGAACTGTGGGCACGGTTTATCCCCGCTGGCGCGGGGAACACTTCCCGGCAATATCTGACACAAATTTCCGTACCGGTTTATCCCCGCTGGCGCGGGGAACACTTGCTCAGGCTGTAAACCTTACTGTAGAACGCCGGTTTATCCCCGCTGGCGCGGGGAACACGCCGGTAGTCAGCACATCATTAAAATCACCCGCGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP011365|1|1|3006297-3006996|CRISPRCasFinder
GTGTTTATCCCCGCTGGCGCGGGGAACAC	GGGGTTAATCGATTCCATATTTACCACAAAGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGCCGATGGGCGGATATCCAGGCGTTGTGCGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGGCGATAATGTACGACGAGTTGCCAAAATAT
CGGTTTATCCCCGCTGACGCGGGGAACAC	AGTTACACCGACAGCCGTAACCCGTTCGATAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTTTTGCAATTTACTTCAGCAATTCTGGTTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCCGTGAAACTGACCATTGGAATGGTCCCAAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGATCCGGCAGCCGGGAAAATTTATTGAGAAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TATCCTGCGCAATTCACGACGAACTGTGGGCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTCCCGGCAATATCTGACACAAATTTCCGTAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTGCTCAGGCTGTAAACCTTACTGTAGAACGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCCGGTAGTCAGCACATCATTAAAATCACCCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP011365|1|1|3006297-3006996|CRT
GTGTTTATCCCCGCTGGCGCGGGGAACAC	GGGGTTAATCGATTCCATATTTACCACAAAGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGCCGATGGGCGGATATCCAGGCGTTGTGCGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGGCGATAATGTACGACGAGTTGCCAAAATAT
CGGTTTATCCCCGCTGACGCGGGGAACAC	AGTTACACCGACAGCCGTAACCCGTTCGATAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTTTTGCAATTTACTTCAGCAATTCTGGTTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCCGTGAAACTGACCATTGGAATGGTCCCAAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGATCCGGCAGCCGGGAAAATTTATTGAGAAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TATCCTGCGCAATTCACGACGAACTGTGGGCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTCCCGGCAATATCTGACACAAATTTCCGTAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTGCTCAGGCTGTAAACCTTACTGTAGAACGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCCGGTAGTCAGCACATCATTAAAATCACCCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP011365|1|1|3006299-3006996|PILER-CR
GTTTATCCCCGCTGGCGCGGGGAACACGG	GGTTAATCGATTCCATATTTACCACAAAGACG
GTTTATCCCCGCTGGCGCGGGGAACACGG	CCGATGGGCGGATATCCAGGCGTTGTGCGACG
GTTTATCCCCGCTGGCGCGGGGAACACTG	GCGATAATGTACGACGAGTTGCCAAAATATCG
GTTTATCCCCGCTGACGCGGGGAACACAG	TTACACCGACAGCCGTAACCCGTTCGATATCG
GTTTATCCCCGCTGGCGCGGGGAACACTC	TTTTGCAATTTACTTCAGCAATTCTGGTTTCG
GTTTATCCCCGCTGGCGCGGGGAACACTC	CGTGAAACTGACCATTGGAATGGTCCCAATCG
GTTTATCCCCGCTGGCGCGGGGAACACAG	ATCCGGCAGCCGGGAAAATTTATTGAGAACCG
GTTTATCCCCGCTGGCGCGGGGAACACTA	TCCTGCGCAATTCACGACGAACTGTGGGCACG
GTTTATCCCCGCTGGCGCGGGGAACACTT	CCCGGCAATATCTGACACAAATTTCCGTACCG
GTTTATCCCCGCTGGCGCGGGGAACACTT	GCTCAGGCTGTAAACCTTACTGTAGAACGCCG
GTTTATCCCCGCTGGCGCGGGGAACACGC	CGGTAGTCAGCACATCATTAAAATCACCCGCG
GTTTATCCCCGCTGGCGCGGGGAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011365.1\|WP_001199961.1\|3018365_3019037_-\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
NZ_CP011365.1\|WP_000741649.1\|3000430_3001141_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
NZ_CP011365.1\|WP_000036734.1\|3019172_3020471_-\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NZ_CP011365.1\|WP_001537530.1\|3001661_3001985_-\|DUF3561-family-protein	unknown	unknown	gnl\|CDD\|371891
NZ_CP011365.1\|WP_000372384.1\|3004076_3004985_-\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
NZ_CP011365.1\|WP_000210863.1\|3020553_3022191_-\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437
NZ_CP011365.1\|WP_001173663.1\|3002035_3002641_-\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
NZ_CP011365.1\|WP_000108313.1\|3015411_3015774_+\|6-carboxytetrahydropterin-synthase-QueD	unknown	unknown	gnl\|CDD\|238264
NZ_CP011365.1\|WP_001221537.1\|2998163_2998925_-\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
NZ_CP011365.1\|WP_001208007.1\|3015863_3016661_-\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|224158
NZ_CP011365.1\|WP_000134246.1\|2998905_2999955_-\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
NZ_CP011365.1\|WP_001219244.1\|2999951_3000431_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
NZ_CP011365.1\|WP_000517480.1\|3001159_3001471_-\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
NZ_CP011365.1\|WP_000210451.1\|3022418_3023219_-\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
NZ_CP011365.1\|WP_017441125.1\|3010654_3011389_-\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP011365.1\|WP_017441128.1\|3002627_3004067_-\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
NZ_CP011365.1\|WP_017441126.1\|3009488_3010442_+\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
NZ_CP011365.1\|WP_017441123.1\|3013176_3014976_-\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|182862
NZ_CP011365.1\|WP_017441127.1\|3005235_3006282_+\|aminopeptidase	unknown	unknown	gnl\|CDD\|182299
NZ_CP011365.1\|WP_017441124.1\|3011464_3013177_-\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402

Protein	Function_ID	Function_description	E-value
NZ_CP011365.1\|WP_001199961.1\|3018365_3019037_-\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	1.43874e-155
NZ_CP011365.1\|WP_000741649.1\|3000430_3001141_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	2.24126e-119
NZ_CP011365.1\|WP_000036734.1\|3019172_3020471_-\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NZ_CP011365.1\|WP_001537530.1\|3001661_3001985_-\|DUF3561-family-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	3.31009e-48
NZ_CP011365.1\|WP_000372384.1\|3004076_3004985_-\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
NZ_CP011365.1\|WP_000210863.1\|3020553_3022191_-\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_CP011365.1\|WP_001173663.1\|3002035_3002641_-\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	4.61291e-146
NZ_CP011365.1\|WP_000108313.1\|3015411_3015774_+\|6-carboxytetrahydropterin-synthase-QueD	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	2.78454e-58
NZ_CP011365.1\|WP_001221537.1\|2998163_2998925_-\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	7.64916e-147
NZ_CP011365.1\|WP_001208007.1\|3015863_3016661_-\|MBL-fold-metallo-hydrolase	gnl\|CDD\|224158	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only].	9.9681e-103
NZ_CP011365.1\|WP_000134246.1\|2998905_2999955_-\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
NZ_CP011365.1\|WP_001219244.1\|2999951_3000431_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	1.27909e-104
NZ_CP011365.1\|WP_000517480.1\|3001159_3001471_-\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	1.08865e-64
NZ_CP011365.1\|WP_000210451.1\|3022418_3023219_-\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	3.42454e-158
NZ_CP011365.1\|WP_017441125.1\|3010654_3011389_-\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	3.66931e-138
NZ_CP011365.1\|WP_017441128.1\|3002627_3004067_-\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
NZ_CP011365.1\|WP_017441126.1\|3009488_3010442_+\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
NZ_CP011365.1\|WP_017441123.1\|3013176_3014976_-\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
NZ_CP011365.1\|WP_017441127.1\|3005235_3006282_+\|aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
NZ_CP011365.1\|WP_017441124.1\|3011464_3013177_-\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0

>NZ_CP011365.1|WP_017441127.1|3005235_3006282_+|aminopeptidase
MFSATRRFAVILALGVGFILPAQAASPGPGEIANTQARHIATFFPGRMTGSPAEMLSADYLRQQFTQMGYQSDIRTFNSRFIYTTKDNRKNWHNVTGSTVIAAHEGRVPQQIIIMAHLDTYAPQSDADVDANLGGLTLQGIDDNAAGLGVMLELAARLKDIPTHYGIRFIATSGEEEGKLGAENLLKRMSDAEKKNTLLVINLDNLIVGDKLYFNSGKNTPEAVRTLTRDRALAIARRYGIAANTNPGRNPSYPKGTGCCNDAEVFDKAGISVLSVEATNWNLGKKDGYQQRVKNASFPNGNSWHDVRLDNQQHIDKALPGRIERRSRDVVRIMLPLVKELAKAEKTS
>NZ_CP011365.1|WP_000372384.1|3004076_3004985_-|sulfate-adenylyltransferase-subunit-CysD
MDQKRLTHLRQLEAESIHIIREVAAEFANPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYAFRDRTANAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWRNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMVDDDRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESHAQTLPEIIEEMLVSTTSERQGRMIDRDQAGSMELKKRQGYF
>NZ_CP011365.1|WP_017441128.1|3002627_3004067_-|sulfate-adenylyltransferase-subunit-CysN
MNTILAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYREETFARIREDYLTFAEQLPGDLDIRFVPLSALEGDNVAAQSANMRWYSGPTLLEVLETVDIQRAVDRQPMRFPVQYVNRPNLDFRGYAGTLASGSVKVGERIKVLPSGVESSVARIVTFDGDKEEACAGEAITLVLNDDIDISRGDLLLAANETLAPARHAAIDVVWMAEQPLTPGQSYDVKLAGKKTRARIEAIRYQIDINNLTQRDVESLPLNGIGLVEMTFDEPLALDIYQQNPVTGGLIFIDRLSNVTVGAGMVRELNERGATPPVEYSAFELELNALVRRHFPHWDARDLLGDKHGAA
>NZ_CP011365.1|WP_001173663.1|3002035_3002641_-|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVAAREQLHGHRGVVLWFTGLSGSGKSTVAGALEEALHQRGVSTYLLDGDNVRHGLCRDLGFSDADRQENIRRVGEVASLMADAGLIVLTAFISPHRAERQLVKERVGHDRFIEIYVNTPLAICEQRDPKGLYKKARAGELRNFTGIDAIYEAPDSPQVHLNGEQLVTNLVSQLLDLLRRRDIIRS
>NZ_CP011365.1|WP_001537530.1|3001661_3001985_-|DUF3561-family-protein
MRNSHNITFTRSDAFMVDDDATSAFPGAVVGFVSWLLALGIPFLLYGPNTLFFFLYTWPFFLALMPVSVIIGIALHLLVKGKILFSIMFTLLAVGALFGALFIWLLG
>NZ_CP011365.1|WP_000517480.1|3001159_3001471_-|cell-division-protein-FtsB
MGKLTLLLLALLVWLQYSLWFGKNGIHDYSRVNDDVVAQQATNAKLKARNDQLFAEIDDLNGGQEAIEERARNELSMTKPGETFYRLVPDASKRAATAGQTHR
>NZ_CP011365.1|WP_000741649.1|3000430_3001141_-|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MAATLLDVCAVVPAAGFGRRMQTECPKQYLSIGNKTILEHSVHALLAHPRVTRVVIAISPGDHRFAQLPLANHPQITVVDGGNERADSVLAGLQAVAKAQWVLVHDAARPCLHQDDLARLLAISENSRVGGILASPVRDTMKRGEPGKNAIAHTVERADLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPALVEGRADNIKVTRPEDLALAEFYLTRTIHQEKA
>NZ_CP011365.1|WP_001219244.1|2999951_3000431_-|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLMKAAK
>NZ_CP011365.1|WP_000134246.1|2998905_2999955_-|tRNA-pseudouridine(13)-synthase-TruD
MTEFDNLTWLHGKPQGSGLLKANPEDFVVVEDLGFTPDGEGEHILLRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDFSAFQLEGCKVLEYARHKRKLRLGALKGNAFTLVLREISDRRDVETRLQAIRDGGVPNYFGAQRFGIGGSNLQGALRWAQSNAPVRDRNKRSFWLSAARSALFNQIVHQRLKKPDFNQVVDGDALQLAGRGSWFVATSEELPELQRRVDEKELMITASLPGSGEWGTQRAALAFEQDAIAQETVLQSLLLREKVEASRRAMLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTMGDYAHIAE
>NZ_CP011365.1|WP_001221537.1|2998163_2998925_-|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFDNGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLNGYQHYDTAAAVTCALLRGLSREPLRTGRILNVNVPDLPLAQIKGIRVTRCGSRHPADKVIPQEDPRGNTLYWIGPPGDKYDAGPDTDFAAVDEGYVSVTPLHVDLTAHSAHDVVSDWLDSVGVGTQW
>NZ_CP011365.1|WP_017441126.1|3009488_3010442_+|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTVISQSNIKDILNISDDTVIESMSREERQLFLQICEVIGAKMTWHPELLQESISTLRKEVTGNAQIKAAVYEMMRPAEAPDHPLVEWQDSLTEDEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFAEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLV
>NZ_CP011365.1|WP_017441125.1|3010654_3011389_-|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVLALAETNAQLETLTAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALKELKAQTWFAGLRREQSGSRAYLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NZ_CP011365.1|WP_017441124.1|3011464_3013177_-|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLSDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAAQKLEPRHAMLLRCRLPGGVITTTQWQAIDKFAADNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGLETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDNNWHLTLFIENGRILDYPGRPLKTGLLEIAKIHQGEFRITANQNLIIASVPESQKAKIETLARDHGLMNAVSAQRENSMACVSFPTCPLAMAEAERFLPSFTDKVEAILEKHGIPDEHIVMRVTGCPNGCGRAMLAEIGLVGKAPGRYNLHLGGNRIGSRIPRMYQENITEPDILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDFWE
>NZ_CP011365.1|WP_017441123.1|3013176_3014976_-|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit
MTTPAPLTGLLPLNPEQLARLQAATTDLTPEQLAWVSGYFWGVLNPRSGAVAVTPAPEGKMPGVTLISASQTGNARRVAEALRDDLLAANLNVTLVNAGDYKFKQIASEKLLVIVTSTQGEGEPPEEAVALHKFLFSKKAPKLTDTAFAVFGLGDTSYEFFCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDVLKSRAPVAAPSQSVATGAVNYIHTSPYTKDAPLTATLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGDEPVTVDGKTLPLAEALEWHFELTVNTANIVENYATLTRSESLLPLVGDKAQLQHYAATTPIVDMVRFSPAQLDAQALIDLLRPLTPRLYSIASAQAEVESEVHITVGVVRYDIEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQRAAEGAEGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLSRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDARRMAADVEKALLEVIAEFGGMDLESADEYLSELRVERRYQRDVY
>NZ_CP011365.1|WP_000108313.1|3015411_3015774_+|6-carboxytetrahydropterin-synthase-QueD
MSTTLYKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIMDFADLKAAFKPTYDRLDHYYLNDIPGLSNPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCVYRGE
>NZ_CP011365.1|WP_001208007.1|3015863_3016661_-|MBL-fold-metallo-hydrolase
MALRIRVLLENHKGAGADKSLKARPGLSLLVEDESTSILFDTGPDGSFMQNALAMGIDLSDVSAVVLSHGHYDHCGGVPWLPDNSRIICHPDIARERYAAMTFLGITRKIKKLSREVDYSRYRMMYTRDPLPIGENFIWSGEIPVVAPEAYGIFGGHDAEPDSILDEGVLIYQSTKGLVIITGCGHRGIANIVRHCQNITGIKRIYALVGGFHLRCASPFTLWRVRRFLQEQKPEKLCGCHCTGAWGRLWLPEITAPATGDVLRF
>NZ_CP011365.1|WP_001199961.1|3018365_3019037_-|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWDKLSDREVSLFSILAKTKESDKWGAASSEDLLAVINRQGYTARHVVITGGEPCIHDLMPLTDLLEKSGFSCQIETSGTHEVRCTPNTWVTVSPKVNMRGGYDVLSQALERANEIKHPVGRVRDIEALDELLATLSDDKPRVIALQPISQKEDATRLCIETCIARNWRLSMQTHKYLNIA
>NZ_CP011365.1|WP_000036734.1|3019172_3020471_-|phosphopyruvate-hydratase
MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMIDLDGTENKSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKGKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>NZ_CP011365.1|WP_000210863.1|3020553_3022191_-|CTP-synthase-(glutamine-hydrolyzing)
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQLAVDIGREHALFMHLTLVPYLAAAGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISMKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIYEEANPAGEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVTVNIKLIDSQDVETRGVEILKDLDAILIPGGFGYRGVEGKIATARYARENNIPYLGICLGMQVALIEFARNVAGMDNANSTEFVPDCKYPVVALITEWRDEDGNVEVRSEKSDLGGTMRLGAQQCQLSDDSLVRQLYGASTIVERHRHRYEVNNMLLKQIEAAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAANEHQKRQAK
>NZ_CP011365.1|WP_000210451.1|3022418_3023219_-|nucleoside-triphosphate-pyrophosphohydrolase
MTTNHQIDRLLTLMQRLRDPENGCPWDKEQTFASIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFGELSADNSEEALVRWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCSNVGFDWTTLGPVVDKVYEEIDEVMFEARQAVVDQAKLEEEMGDLLFATVNMARHLGTKAELALQKANDKFERRFREVERIVAARGLEMTGVDLETMEEVWQEVKRQEIDL

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Crispr_ID: NZ_CP011365_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011365_2

3016759-3018069

Orphan

I-E

Consensus_repeat	Method
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRISPRCasFinder
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	PILER-CR

21 spacers

The CRISPR arrays of NZ_CP011365_2

>merge|NZ_CP011365|2|3016759-3018069|CRISPRCasFinder,CRT,PILER-CR
ACGGCTATCCTTGTTGGCGCGGGGAACACGTTACCGTTGGCGTAACGCTGAATTGTTGGTACGGTTTATCCCCGCTGGCGCGGGGAACACGATAAGTTTCGCCATCAGAACCGCCCTCCAACCGGTTTATCCCCGCTGGCGCAGGGAACACATAACCTCTTGCGTGCCGTAATGTTGGTGTTTCGGTTTATCCCCGCTGGCGCGGGGAACACAGACACAAAAACACCAGCAAAGGACGTTACCCCGGTTTATCCCCGCTGGCGCGGGGAACACCCAAAATCAGGAGTCGAGAGCTCCAGGCTCTGCGGTTTATCCCCGCTGGCGCGGGGAACACGTTAATGAATCAAATCCAGTCCAGTCGTATTGCGGTTTATCCCCGCTGGCGCGGGGAACACGGCGACCAAAATTATCACGCCAGCGTTACTGGCGGTTTATCCCCGCTGGCGCGGGGAACACCCCGCGTTGTTCCGGTTGTTCCCGGATCGGTCCGGTTTATCCCCGCTGGCGCGGGGAACACAGAAGCCACTGTCTGGGGTGGCTATGCCATTTCGGTTTATCCCCGCTGGCGCGGGGAACACTTTGTTTTTACTAATTCGTTTCATCATTCCCCCGGTTTATCCCCGCTGGCGCGGGGAACACATGCCGACCCTGACTGCAATCATGGTCAGCGCCGGTTTATCCCCGCTGGCGCGGGGAACACAGTAACGAGCGCCACTCTCAGAGCGATAAACGCGGTTTATCCCCGCTGGCGCGGGGAACACCAGTGCGGCCAGAATCCCGATCAACATATTCGCGGTTTATCCCCGCTGGCGCGGGGAACACTACTGCTATCAACCTCGCCACCTCGACCGCACCGGTTTATCCCCGCTGGCGCGGGGAACACGGACTGTCTGTGCAGCGCGTCCAGCGCCTGCGCGGTTTATCCCCGCTGGCGCGGGGAACACACGTTAAAAAGTCCTGTCGGCGGTACAGTGGACGGTTTATCCCCGCTGGCGCGGGGAACACTTTACTTCACCGTCCTGAAGCATTTTAACAGTCGGTTTATCCCCGCTGGCGCGGGGAACACGGCGGCAGTCGTCGTACCAGATACCAATCTGCTGGTTTATCCCCGCTGGCGCGGGGAACACGCTGAAAGGCGAACACCTGATGACCTTTGATACCGGTTTATCTCCGCTGGCGCGGGGAACACTTATTTCTATGGGCGGACGAAAAAGCATTAAGCGGTTTATCCCCGCTGGCGCGGGGAACACACGGTTAATGTTAATGTCGTAAATAACGAAGGCGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP011365|2|2|3016759-3018069|CRISPRCasFinder
ACGGCTATCCTTGTTGGCGCGGGGAACAC	GTTACCGTTGGCGTAACGCTGAATTGTTGGTA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GATAAGTTTCGCCATCAGAACCGCCCTCCAAC
CGGTTTATCCCCGCTGGCGCAGGGAACAC	ATAACCTCTTGCGTGCCGTAATGTTGGTGTTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGACACAAAAACACCAGCAAAGGACGTTACCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CCAAAATCAGGAGTCGAGAGCTCCAGGCTCTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTTAATGAATCAAATCCAGTCCAGTCGTATTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGCGACCAAAATTATCACGCCAGCGTTACTGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CCCGCGTTGTTCCGGTTGTTCCCGGATCGGTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGAAGCCACTGTCTGGGGTGGCTATGCCATTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTTGTTTTTACTAATTCGTTTCATCATTCCCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATGCCGACCCTGACTGCAATCATGGTCAGCGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGTAACGAGCGCCACTCTCAGAGCGATAAACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CAGTGCGGCCAGAATCCCGATCAACATATTCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TACTGCTATCAACCTCGCCACCTCGACCGCAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGACTGTCTGTGCAGCGCGTCCAGCGCCTGCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACGTTAAAAAGTCCTGTCGGCGGTACAGTGGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTTACTTCACCGTCCTGAAGCATTTTAACAGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGCGGCAGTCGTCGTACCAGATACCAATCTGC
TGGTTTATCCCCGCTGGCGCGGGGAACAC	GCTGAAAGGCGAACACCTGATGACCTTTGATAC
CGGTTTATCTCCGCTGGCGCGGGGAACAC	TTATTTCTATGGGCGGACGAAAAAGCATTAAG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACGGTTAATGTTAATGTCGTAAATAACGAAGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP011365|2|2|3016759-3018069|CRT
ACGGCTATCCTTGTTGGCGCGGGGAACAC	GTTACCGTTGGCGTAACGCTGAATTGTTGGTA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GATAAGTTTCGCCATCAGAACCGCCCTCCAAC
CGGTTTATCCCCGCTGGCGCAGGGAACAC	ATAACCTCTTGCGTGCCGTAATGTTGGTGTTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGACACAAAAACACCAGCAAAGGACGTTACCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CCAAAATCAGGAGTCGAGAGCTCCAGGCTCTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTTAATGAATCAAATCCAGTCCAGTCGTATTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGCGACCAAAATTATCACGCCAGCGTTACTGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CCCGCGTTGTTCCGGTTGTTCCCGGATCGGTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGAAGCCACTGTCTGGGGTGGCTATGCCATTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTTGTTTTTACTAATTCGTTTCATCATTCCCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATGCCGACCCTGACTGCAATCATGGTCAGCGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGTAACGAGCGCCACTCTCAGAGCGATAAACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CAGTGCGGCCAGAATCCCGATCAACATATTCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TACTGCTATCAACCTCGCCACCTCGACCGCAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGACTGTCTGTGCAGCGCGTCCAGCGCCTGCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACGTTAAAAAGTCCTGTCGGCGGTACAGTGGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTTACTTCACCGTCCTGAAGCATTTTAACAGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGCGGCAGTCGTCGTACCAGATACCAATCTGC
TGGTTTATCCCCGCTGGCGCGGGGAACAC	GCTGAAAGGCGAACACCTGATGACCTTTGATAC
CGGTTTATCTCCGCTGGCGCGGGGAACAC	TTATTTCTATGGGCGGACGAAAAAGCATTAAG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACGGTTAATGTTAATGTCGTAAATAACGAAGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP011365|2|2|3016820-3018069|PILER-CR
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GATAAGTTTCGCCATCAGAACCGCCCTCCAAC
CGGTTTATCCCCGCTGGCGCAGGGAACAC	ATAACCTCTTGCGTGCCGTAATGTTGGTGTTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGACACAAAAACACCAGCAAAGGACGTTACCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CCAAAATCAGGAGTCGAGAGCTCCAGGCTCTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTTAATGAATCAAATCCAGTCCAGTCGTATTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGCGACCAAAATTATCACGCCAGCGTTACTGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CCCGCGTTGTTCCGGTTGTTCCCGGATCGGTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGAAGCCACTGTCTGGGGTGGCTATGCCATTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTTGTTTTTACTAATTCGTTTCATCATTCCCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATGCCGACCCTGACTGCAATCATGGTCAGCGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGTAACGAGCGCCACTCTCAGAGCGATAAACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CAGTGCGGCCAGAATCCCGATCAACATATTCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TACTGCTATCAACCTCGCCACCTCGACCGCAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGACTGTCTGTGCAGCGCGTCCAGCGCCTGCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACGTTAAAAAGTCCTGTCGGCGGTACAGTGGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTTACTTCACCGTCCTGAAGCATTTTAACAGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGCGGCAGTCGTCGTACCAGATACCAATCTGC
TGGTTTATCCCCGCTGGCGCGGGGAACAC	GCTGAAAGGCGAACACCTGATGACCTTTGATAC
CGGTTTATCTCCGCTGGCGCGGGGAACAC	TTATTTCTATGGGCGGACGAAAAAGCATTAAG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACGGTTAATGTTAATGTCGTAAATAACGAAGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011365.1\|WP_017441121.1\|3027204_3027978_+\|fimbria/pilus-periplasmic-chaperone	unknown	unknown	gnl\|CDD\|185177
NZ_CP011365.1\|WP_000036734.1\|3019172_3020471_-\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NZ_CP011365.1\|WP_017441120.1\|3027997_3028504_+\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185178
NZ_CP011365.1\|WP_000372384.1\|3004076_3004985_-\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
NZ_CP011365.1\|WP_077907220.1\|3024492_3027192_+\|fimbrial-biogenesis-outer-membrane-usher-protein	unknown	unknown	gnl\|CDD\|185176
NZ_CP011365.1\|WP_017441119.1\|3028985_3029522_+\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185168
NZ_CP011365.1\|WP_001173663.1\|3002035_3002641_-\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
NZ_CP011365.1\|WP_000108313.1\|3015411_3015774_+\|6-carboxytetrahydropterin-synthase-QueD	unknown	unknown	gnl\|CDD\|238264
NZ_CP011365.1\|WP_000210863.1\|3020553_3022191_-\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437
NZ_CP011365.1\|WP_017441125.1\|3010654_3011389_-\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP011365.1\|WP_000832396.1\|3028518_3028989_+\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185179
NZ_CP011365.1\|WP_001199961.1\|3018365_3019037_-\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
NZ_CP011365.1\|WP_000210451.1\|3022418_3023219_-\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
NZ_CP011365.1\|WP_017441124.1\|3011464_3013177_-\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
NZ_CP011365.1\|WP_000842512.1\|3023825_3024413_+\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185169
NZ_CP011365.1\|WP_017441128.1\|3002627_3004067_-\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
NZ_CP011365.1\|WP_017441126.1\|3009488_3010442_+\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
NZ_CP011365.1\|WP_017441123.1\|3013176_3014976_-\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|182862
NZ_CP011365.1\|WP_017441127.1\|3005235_3006282_+\|aminopeptidase	unknown	unknown	gnl\|CDD\|182299
NZ_CP011365.1\|WP_001208007.1\|3015863_3016661_-\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|224158

Protein	Function_ID	Function_description	E-value
NZ_CP011365.1\|WP_017441121.1\|3027204_3027978_+\|fimbria/pilus-periplasmic-chaperone	gnl\|CDD\|185177	PRK15274, PRK15274, putative periplasmic fimbrial chaperone protein SteC; Provisional.	0
NZ_CP011365.1\|WP_000036734.1\|3019172_3020471_-\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NZ_CP011365.1\|WP_017441120.1\|3027997_3028504_+\|fimbrial-protein	gnl\|CDD\|185178	PRK15275, PRK15275, putative fimbrial protein SteD; Provisional.	1.2915e-104
NZ_CP011365.1\|WP_000372384.1\|3004076_3004985_-\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
NZ_CP011365.1\|WP_077907220.1\|3024492_3027192_+\|fimbrial-biogenesis-outer-membrane-usher-protein	gnl\|CDD\|185176	PRK15273, PRK15273, fimbrial biogenesis outer membrane usher protein.	0
NZ_CP011365.1\|WP_017441119.1\|3028985_3029522_+\|fimbrial-protein	gnl\|CDD\|185168	PRK15260, PRK15260, fimbrial protein SteF; Provisional.	3.75281e-120
NZ_CP011365.1\|WP_001173663.1\|3002035_3002641_-\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	4.61291e-146
NZ_CP011365.1\|WP_000108313.1\|3015411_3015774_+\|6-carboxytetrahydropterin-synthase-QueD	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	2.78454e-58
NZ_CP011365.1\|WP_000210863.1\|3020553_3022191_-\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_CP011365.1\|WP_017441125.1\|3010654_3011389_-\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	3.66931e-138
NZ_CP011365.1\|WP_000832396.1\|3028518_3028989_+\|fimbrial-protein	gnl\|CDD\|185179	PRK15276, PRK15276, putative fimbrial subunit SteE; Provisional.	1.41178e-100
NZ_CP011365.1\|WP_001199961.1\|3018365_3019037_-\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	1.43874e-155
NZ_CP011365.1\|WP_000210451.1\|3022418_3023219_-\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	3.42454e-158
NZ_CP011365.1\|WP_017441124.1\|3011464_3013177_-\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
NZ_CP011365.1\|WP_000842512.1\|3023825_3024413_+\|fimbrial-protein	gnl\|CDD\|185169	PRK15261, PRK15261, fimbrial protein SteA; Provisional.	5.36845e-100
NZ_CP011365.1\|WP_017441128.1\|3002627_3004067_-\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
NZ_CP011365.1\|WP_017441126.1\|3009488_3010442_+\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
NZ_CP011365.1\|WP_017441123.1\|3013176_3014976_-\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
NZ_CP011365.1\|WP_017441127.1\|3005235_3006282_+\|aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
NZ_CP011365.1\|WP_001208007.1\|3015863_3016661_-\|MBL-fold-metallo-hydrolase	gnl\|CDD\|224158	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only].	9.9681e-103

>NZ_CP011365.1|WP_001208007.1|3015863_3016661_-|MBL-fold-metallo-hydrolase
MALRIRVLLENHKGAGADKSLKARPGLSLLVEDESTSILFDTGPDGSFMQNALAMGIDLSDVSAVVLSHGHYDHCGGVPWLPDNSRIICHPDIARERYAAMTFLGITRKIKKLSREVDYSRYRMMYTRDPLPIGENFIWSGEIPVVAPEAYGIFGGHDAEPDSILDEGVLIYQSTKGLVIITGCGHRGIANIVRHCQNITGIKRIYALVGGFHLRCASPFTLWRVRRFLQEQKPEKLCGCHCTGAWGRLWLPEITAPATGDVLRF
>NZ_CP011365.1|WP_000108313.1|3015411_3015774_+|6-carboxytetrahydropterin-synthase-QueD
MSTTLYKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIMDFADLKAAFKPTYDRLDHYYLNDIPGLSNPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCVYRGE
>NZ_CP011365.1|WP_017441123.1|3013176_3014976_-|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit
MTTPAPLTGLLPLNPEQLARLQAATTDLTPEQLAWVSGYFWGVLNPRSGAVAVTPAPEGKMPGVTLISASQTGNARRVAEALRDDLLAANLNVTLVNAGDYKFKQIASEKLLVIVTSTQGEGEPPEEAVALHKFLFSKKAPKLTDTAFAVFGLGDTSYEFFCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDVLKSRAPVAAPSQSVATGAVNYIHTSPYTKDAPLTATLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGDEPVTVDGKTLPLAEALEWHFELTVNTANIVENYATLTRSESLLPLVGDKAQLQHYAATTPIVDMVRFSPAQLDAQALIDLLRPLTPRLYSIASAQAEVESEVHITVGVVRYDIEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQRAAEGAEGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLSRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDARRMAADVEKALLEVIAEFGGMDLESADEYLSELRVERRYQRDVY
>NZ_CP011365.1|WP_017441124.1|3011464_3013177_-|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLSDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAAQKLEPRHAMLLRCRLPGGVITTTQWQAIDKFAADNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGLETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDNNWHLTLFIENGRILDYPGRPLKTGLLEIAKIHQGEFRITANQNLIIASVPESQKAKIETLARDHGLMNAVSAQRENSMACVSFPTCPLAMAEAERFLPSFTDKVEAILEKHGIPDEHIVMRVTGCPNGCGRAMLAEIGLVGKAPGRYNLHLGGNRIGSRIPRMYQENITEPDILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDFWE
>NZ_CP011365.1|WP_017441125.1|3010654_3011389_-|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVLALAETNAQLETLTAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALKELKAQTWFAGLRREQSGSRAYLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NZ_CP011365.1|WP_017441126.1|3009488_3010442_+|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTVISQSNIKDILNISDDTVIESMSREERQLFLQICEVIGAKMTWHPELLQESISTLRKEVTGNAQIKAAVYEMMRPAEAPDHPLVEWQDSLTEDEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFAEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLV
>NZ_CP011365.1|WP_017441127.1|3005235_3006282_+|aminopeptidase
MFSATRRFAVILALGVGFILPAQAASPGPGEIANTQARHIATFFPGRMTGSPAEMLSADYLRQQFTQMGYQSDIRTFNSRFIYTTKDNRKNWHNVTGSTVIAAHEGRVPQQIIIMAHLDTYAPQSDADVDANLGGLTLQGIDDNAAGLGVMLELAARLKDIPTHYGIRFIATSGEEEGKLGAENLLKRMSDAEKKNTLLVINLDNLIVGDKLYFNSGKNTPEAVRTLTRDRALAIARRYGIAANTNPGRNPSYPKGTGCCNDAEVFDKAGISVLSVEATNWNLGKKDGYQQRVKNASFPNGNSWHDVRLDNQQHIDKALPGRIERRSRDVVRIMLPLVKELAKAEKTS
>NZ_CP011365.1|WP_000372384.1|3004076_3004985_-|sulfate-adenylyltransferase-subunit-CysD
MDQKRLTHLRQLEAESIHIIREVAAEFANPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYAFRDRTANAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWRNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMVDDDRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESHAQTLPEIIEEMLVSTTSERQGRMIDRDQAGSMELKKRQGYF
>NZ_CP011365.1|WP_017441128.1|3002627_3004067_-|sulfate-adenylyltransferase-subunit-CysN
MNTILAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYREETFARIREDYLTFAEQLPGDLDIRFVPLSALEGDNVAAQSANMRWYSGPTLLEVLETVDIQRAVDRQPMRFPVQYVNRPNLDFRGYAGTLASGSVKVGERIKVLPSGVESSVARIVTFDGDKEEACAGEAITLVLNDDIDISRGDLLLAANETLAPARHAAIDVVWMAEQPLTPGQSYDVKLAGKKTRARIEAIRYQIDINNLTQRDVESLPLNGIGLVEMTFDEPLALDIYQQNPVTGGLIFIDRLSNVTVGAGMVRELNERGATPPVEYSAFELELNALVRRHFPHWDARDLLGDKHGAA
>NZ_CP011365.1|WP_001173663.1|3002035_3002641_-|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVAAREQLHGHRGVVLWFTGLSGSGKSTVAGALEEALHQRGVSTYLLDGDNVRHGLCRDLGFSDADRQENIRRVGEVASLMADAGLIVLTAFISPHRAERQLVKERVGHDRFIEIYVNTPLAICEQRDPKGLYKKARAGELRNFTGIDAIYEAPDSPQVHLNGEQLVTNLVSQLLDLLRRRDIIRS
>NZ_CP011365.1|WP_001199961.1|3018365_3019037_-|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWDKLSDREVSLFSILAKTKESDKWGAASSEDLLAVINRQGYTARHVVITGGEPCIHDLMPLTDLLEKSGFSCQIETSGTHEVRCTPNTWVTVSPKVNMRGGYDVLSQALERANEIKHPVGRVRDIEALDELLATLSDDKPRVIALQPISQKEDATRLCIETCIARNWRLSMQTHKYLNIA
>NZ_CP011365.1|WP_000036734.1|3019172_3020471_-|phosphopyruvate-hydratase
MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMIDLDGTENKSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKGKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>NZ_CP011365.1|WP_000210863.1|3020553_3022191_-|CTP-synthase-(glutamine-hydrolyzing)
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQLAVDIGREHALFMHLTLVPYLAAAGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISMKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIYEEANPAGEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVTVNIKLIDSQDVETRGVEILKDLDAILIPGGFGYRGVEGKIATARYARENNIPYLGICLGMQVALIEFARNVAGMDNANSTEFVPDCKYPVVALITEWRDEDGNVEVRSEKSDLGGTMRLGAQQCQLSDDSLVRQLYGASTIVERHRHRYEVNNMLLKQIEAAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAANEHQKRQAK
>NZ_CP011365.1|WP_000210451.1|3022418_3023219_-|nucleoside-triphosphate-pyrophosphohydrolase
MTTNHQIDRLLTLMQRLRDPENGCPWDKEQTFASIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFGELSADNSEEALVRWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCSNVGFDWTTLGPVVDKVYEEIDEVMFEARQAVVDQAKLEEEMGDLLFATVNMARHLGTKAELALQKANDKFERRFREVERIVAARGLEMTGVDLETMEEVWQEVKRQEIDL
>NZ_CP011365.1|WP_000842512.1|3023825_3024413_+|fimbrial-protein
MKSSHFCKLAVTASLVMGIVSGAQAAGSNTAKVTFLGNIVDSPCSVTLDTEDQTVNMGSSIGNGTLSNGKTTINNARTFHIDLEGCTWATEKNMNVVFTTGSGTTAATGATDNLALMKTDGTGAISNVSLAIGDAGKNNIKLGDTYTQAIADLDGDTILDEKQSLNFTAWLVGAATGTVGTGEFSSAANVTISYL
>NZ_CP011365.1|WP_077907220.1|3024492_3027192_+|fimbrial-biogenesis-outer-membrane-usher-protein
MMNNTWKSVLCPIACGVGMLLSVSPYSASGKDIEFNTDFLDVKNRDNVNIAQFSRKGFILPGVYLLQIKINGQTLPQEFPVNWVIPEHDPQGSEVCAEPELVTQLGIKPELAEKLVWITHGERQCLAPDSLKGMDFQADLGHSTLLVNLPQAYMEYSDVDWDPPARWDNGIPGIILDYNINNQLRHDQESGSEEQSISGNGTLGANLGAWRLRADWQASYDHRDDDENTSTLHDQSWSRYYAYRALPTLGAKLTLGESYLQSDVFDSFNYIGASVISDDQMLPPKLRGYAPEIVGIARSNAKVKVSWQGRVLYETQVPAGPFRIQDLNQSVSGTLHVTVEEQNGQTQEFDVNTASVPFLTRPGMVRYKMALGRPQDWDHHPITGTFASAEASWGVTNGWSLYGGAIGESNYQAVALGSGKDLGVVGAVAVDITHSIAHMPQDDGFDGETLQGNSYRISYSRDFDEIDSRLTFAGYRFSEKNFMSMSDYLDAKTYHHLNAGHEKERYTVTYNQNFREQGMSAYFSYSRSTFWDSPDQSNYNLSLSWYFDLGSIKNLSASLNSYRSEYNGDKDDGVYISLSVPWGNDSISYNGTFNGSQHRNQLGYSGHSQNGDNWQLHVGQDEQGAQADGYYSHQGALTDIDLSADYEEGSYRSLGMSLRGGMTLTTQGGALHRGSLAGSTRLLVDTDGIADVPVSGSGSPTSTNIFGKAVIADVGSYSRSLARIDLNKLPEKAEATKSVVQITLTEGAIGYRHFDVVSGEKMMAVFRLADGDFPPFGAEVKNERQQQLGLVADDGNAWLAGVKAGETLKVFWDGAAQCEASLPPTFTPELLANALLLPCKMLEGQPPTAPQKSSPLPAQPLIQEHTQTDGQPAAPVATTTQTPPIPLADNHAVNRKDME
>NZ_CP011365.1|WP_017441121.1|3027204_3027978_+|fimbria/pilus-periplasmic-chaperone
MNKTNHFKRQALIASVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQAWLEDDKFAKDTRYFTALPPLQRIEPKSDGQVKVQPLPAAASLPQDRESLFYFNVREIPPKSDKPNTLQLALQTRIKFFYRPVAVARQVDKTHPWQTKLTLTYQGDGVIFDNPTPFYLVISNAGSKENETASGFKNLLIAPREKMTSPIKGASLGSSPVVGYVDDYGGHRLLVFTCSGNTCKVNEEKTRDAEKKANK
>NZ_CP011365.1|WP_017441120.1|3027997_3028504_+|fimbrial-protein
MTMLTRWKMLVLLCGGFVAGTEAAGTKTVQLELHLVVTQPPPCTVGGASVEFGDVLTTKVGDASQTKPVGYSLNCDGRASDYLKLQIQGTTTTISGEQVLQTSVQGLGIRIQQAGNKQLVPVGITDWLNFTLSGNNGPELEAVPVKEPTTQLAGGDFNASATLVVDYQ
>NZ_CP011365.1|WP_000832396.1|3028518_3028989_+|fimbrial-protein
MKRVLILTLLITQFACADNLTFHGKLINPPACTINNGETLEVSFGSVIIDNIDGVNYLTEIPWTLTCDSSFRDDALTFTLSYLGTATPYSANALTTNVPELGIELQQNGTVFPPGTSLTIDESSLPTLKAVPVKQPGKEPAEGDFEAFATLQVDYQ
>NZ_CP011365.1|WP_017441119.1|3028985_3029522_+|fimbrial-protein
MNRIFQTAGHLIGGVMLWAVCNTLPAATPNVHYSGKLVAGACNLVVDNDTMATVDFHTIGSDNFDASGQTTPVPFTLSLQDCKTALANGVVVTFQGVEDSTLPGLLALEPSSEASGFAIGVETAAQQPVSINATEGTAFVLKEGITTINLQARLQKYAGEDVMPGEFSGTATVSFEYQ

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP011365_2	2.18\|3017825\|32\|NZ_CP011365\|CRISPRCasFinder,CRT,PILER-CR	3017825-3017856	32	NZ_CP011365.1	2512006-2512037	1	0.969

1. spacer 2.18|3017825|32|NZ_CP011365|CRISPRCasFinder,CRT,PILER-CR matches to position: 2512006-2512037, mismatch: 1, identity: 0.969

ggcggcagtcgtcgtaccagataccaatctgc	CRISPR spacer
ggcggcagtcgtcgtaccggataccaatctgc	Protospacer
******************.*************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP011365_1	1.2\|3006387\|32\|NZ_CP011365\|CRISPRCasFinder,CRT	3006387-3006418	32	NZ_CP044185	Salmonella enterica subsp. enterica strain AR-0403 plasmid pAR-0403	35345-35376	0	1.0
NZ_CP011365_1	1.13\|3006389\|32\|NZ_CP011365\|PILER-CR	3006389-3006420	32	NZ_CP044185	Salmonella enterica subsp. enterica strain AR-0403 plasmid pAR-0403	35345-35376	0	1.0
NZ_CP011365_1	1.2\|3006387\|32\|NZ_CP011365\|CRISPRCasFinder,CRT	3006387-3006418	32	NZ_CP029990	Salmonella enterica subsp. diarizonae serovar 48:i:z strain SA20121591 plasmid pSA20121591.1, complete sequence	95164-95195	1	0.969
NZ_CP011365_1	1.2\|3006387\|32\|NZ_CP011365\|CRISPRCasFinder,CRT	3006387-3006418	32	NZ_CP054718	Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence	9403-9434	1	0.969
NZ_CP011365_1	1.2\|3006387\|32\|NZ_CP011365\|CRISPRCasFinder,CRT	3006387-3006418	32	NZ_CP054718	Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence	39737-39768	1	0.969
NZ_CP011365_1	1.2\|3006387\|32\|NZ_CP011365\|CRISPRCasFinder,CRT	3006387-3006418	32	NZ_CP054718	Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence	113376-113407	1	0.969
NZ_CP011365_1	1.13\|3006389\|32\|NZ_CP011365\|PILER-CR	3006389-3006420	32	NZ_CP029990	Salmonella enterica subsp. diarizonae serovar 48:i:z strain SA20121591 plasmid pSA20121591.1, complete sequence	95164-95195	1	0.969
NZ_CP011365_1	1.13\|3006389\|32\|NZ_CP011365\|PILER-CR	3006389-3006420	32	NZ_CP054718	Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence	9403-9434	1	0.969
NZ_CP011365_1	1.13\|3006389\|32\|NZ_CP011365\|PILER-CR	3006389-3006420	32	NZ_CP054718	Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence	39737-39768	1	0.969
NZ_CP011365_1	1.13\|3006389\|32\|NZ_CP011365\|PILER-CR	3006389-3006420	32	NZ_CP054718	Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence	113376-113407	1	0.969
NZ_CP011365_2	2.11\|3017398\|32\|NZ_CP011365\|CRISPRCasFinder,CRT,PILER-CR	3017398-3017429	32	NZ_CP009113	Rhodococcus opacus strain 1CP plasmid pR1CP2, complete sequence	57554-57585	6	0.812
NZ_CP011365_1	1.2\|3006387\|32\|NZ_CP011365\|CRISPRCasFinder,CRT	3006387-3006418	32	NZ_CP040720	Rhodococcus pyridinivorans strain YF3 plasmid unnamed1, complete sequence	270963-270994	7	0.781
NZ_CP011365_1	1.13\|3006389\|32\|NZ_CP011365\|PILER-CR	3006389-3006420	32	NZ_CP040720	Rhodococcus pyridinivorans strain YF3 plasmid unnamed1, complete sequence	270963-270994	7	0.781
NZ_CP011365_2	2.3\|3016910\|32\|NZ_CP011365\|CRISPRCasFinder,CRT,PILER-CR	3016910-3016941	32	MH622910	Caudovirales sp. isolate ctdb_3, complete genome	4473-4504	8	0.75
NZ_CP011365_2	2.15\|3017642\|32\|NZ_CP011365\|CRISPRCasFinder,CRT,PILER-CR	3017642-3017673	32	NC_024970	Streptomyces aureofaciens strain CCM3239 plasmid pSA3239, complete sequence	189898-189929	8	0.75
NZ_CP011365_2	2.15\|3017642\|32\|NZ_CP011365\|CRISPRCasFinder,CRT,PILER-CR	3017642-3017673	32	NZ_KJ396772	Streptomyces lavendulae subsp. lavendulae strain CCM3239 plasmid pSA3239, complete sequence	189898-189929	8	0.75
NZ_CP011365_2	2.15\|3017642\|32\|NZ_CP011365\|CRISPRCasFinder,CRT,PILER-CR	3017642-3017673	32	NZ_CP012940	Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence	1789627-1789658	8	0.75
NZ_CP011365_2	2.15\|3017642\|32\|NZ_CP011365\|CRISPRCasFinder,CRT,PILER-CR	3017642-3017673	32	NZ_CP012944	Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence	1806317-1806348	8	0.75
NZ_CP011365_2	2.15\|3017642\|32\|NZ_CP011365\|CRISPRCasFinder,CRT,PILER-CR	3017642-3017673	32	NZ_CP024986	Streptomyces lavendulae subsp. lavendulae strain CCM 3239 plasmid pSA3239, complete sequence	51148-51179	8	0.75
NZ_CP011365_2	2.15\|3017642\|32\|NZ_CP011365\|CRISPRCasFinder,CRT,PILER-CR	3017642-3017673	32	NC_017575	Ralstonia solanacearum Po82 megaplasmid, complete sequence	212687-212718	8	0.75
NZ_CP011365_2	2.15\|3017642\|32\|NZ_CP011365\|CRISPRCasFinder,CRT,PILER-CR	3017642-3017673	32	NC_017805	Deinococcus gobiensis I-0 plasmid P1, complete sequence	382523-382554	8	0.75
NZ_CP011365_2	2.15\|3017642\|32\|NZ_CP011365\|CRISPRCasFinder,CRT,PILER-CR	3017642-3017673	32	NZ_CP026308	Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence	212685-212716	8	0.75
NZ_CP011365_2	2.15\|3017642\|32\|NZ_CP011365\|CRISPRCasFinder,CRT,PILER-CR	3017642-3017673	32	NZ_CP051295	Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence	1769551-1769582	8	0.75
NZ_CP011365_2	2.15\|3017642\|32\|NZ_CP011365\|CRISPRCasFinder,CRT,PILER-CR	3017642-3017673	32	MN536027	Pseudomonas phage vB_Pae-SS2019XII, complete genome	14176-14207	8	0.75
NZ_CP011365_1	1.5\|3006570\|32\|NZ_CP011365\|CRISPRCasFinder,CRT	3006570-3006601	32	NZ_CP021643	Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence	63580-63611	9	0.719
NZ_CP011365_1	1.5\|3006570\|32\|NZ_CP011365\|CRISPRCasFinder,CRT	3006570-3006601	32	NZ_CP054613	Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence	2378875-2378906	9	0.719
NZ_CP011365_1	1.10\|3006875\|32\|NZ_CP011365\|CRISPRCasFinder,CRT	3006875-3006906	32	AP018321	Nostoc sp. HK-01 plasmid plasmid3 DNA, complete genome	46531-46562	9	0.719
NZ_CP011365_1	1.16\|3006572\|32\|NZ_CP011365\|PILER-CR	3006572-3006603	32	NZ_CP021643	Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence	63580-63611	9	0.719
NZ_CP011365_1	1.16\|3006572\|32\|NZ_CP011365\|PILER-CR	3006572-3006603	32	NZ_CP054613	Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence	2378875-2378906	9	0.719
NZ_CP011365_1	1.21\|3006877\|32\|NZ_CP011365\|PILER-CR	3006877-3006908	32	AP018321	Nostoc sp. HK-01 plasmid plasmid3 DNA, complete genome	46531-46562	9	0.719
NZ_CP011365_2	2.10\|3017337\|32\|NZ_CP011365\|CRISPRCasFinder,CRT,PILER-CR	3017337-3017368	32	MN694197	Marine virus AFVG_250M303, complete genome	6755-6786	9	0.719
NZ_CP011365_2	2.11\|3017398\|32\|NZ_CP011365\|CRISPRCasFinder,CRT,PILER-CR	3017398-3017429	32	MN096355	Mycobacterium phage Purky, complete genome	25716-25747	9	0.719
NZ_CP011365_2	2.15\|3017642\|32\|NZ_CP011365\|CRISPRCasFinder,CRT,PILER-CR	3017642-3017673	32	NZ_CP049908	Hymenobacter sp. HDW8 plasmid p_unnamed1, complete sequence	276209-276240	9	0.719
NZ_CP011365_2	2.15\|3017642\|32\|NZ_CP011365\|CRISPRCasFinder,CRT,PILER-CR	3017642-3017673	32	NZ_CP013436	Burkholderia latens strain AU17928 isolate AU17928 plasmid pAU17928, complete sequence	20088-20119	9	0.719
NZ_CP011365_2	2.15\|3017642\|32\|NZ_CP011365\|CRISPRCasFinder,CRT,PILER-CR	3017642-3017673	32	NZ_CP049813	Monaibacterium sp. ALG8 plasmid unnamed2, complete sequence	69714-69745	9	0.719
NZ_CP011365_2	2.17\|3017764\|32\|NZ_CP011365\|CRISPRCasFinder,CRT,PILER-CR	3017764-3017795	32	NZ_CP014361	Methylomonas sp. DH-1 plasmid, complete sequence	141473-141504	9	0.719
NZ_CP011365_1	1.4\|3006509\|32\|NZ_CP011365\|CRISPRCasFinder,CRT	3006509-3006540	32	NZ_CP042332	Bosea sp. F3-2 plasmid pB32-1, complete sequence	318607-318638	10	0.688
NZ_CP011365_1	1.10\|3006875\|32\|NZ_CP011365\|CRISPRCasFinder,CRT	3006875-3006906	32	MG592456	Vibrio phage 1.081.O._10N.286.52.C2, partial genome	229928-229959	10	0.688
NZ_CP011365_1	1.15\|3006511\|32\|NZ_CP011365\|PILER-CR	3006511-3006542	32	NZ_CP042332	Bosea sp. F3-2 plasmid pB32-1, complete sequence	318607-318638	10	0.688
NZ_CP011365_1	1.21\|3006877\|32\|NZ_CP011365\|PILER-CR	3006877-3006908	32	MG592456	Vibrio phage 1.081.O._10N.286.52.C2, partial genome	229928-229959	10	0.688
NZ_CP011365_2	2.3\|3016910\|32\|NZ_CP011365\|CRISPRCasFinder,CRT,PILER-CR	3016910-3016941	32	NZ_CP043499	Rhizobium grahamii strain BG7 plasmid unnamed, complete sequence	1409535-1409566	10	0.688
NZ_CP011365_2	2.8\|3017215\|32\|NZ_CP011365\|CRISPRCasFinder,CRT,PILER-CR	3017215-3017246	32	NZ_CP031899	Escherichia coli O113:H21 strain FWSEC0010 plasmid unnamed1, complete sequence	76272-76303	10	0.688
NZ_CP011365_2	2.8\|3017215\|32\|NZ_CP011365\|CRISPRCasFinder,CRT,PILER-CR	3017215-3017246	32	NZ_KM085450	Escherichia coli O104:H21 strain 94-3024 plasmid pO104_H21, complete sequence	141990-142021	10	0.688
NZ_CP011365_2	2.8\|3017215\|32\|NZ_CP011365\|CRISPRCasFinder,CRT,PILER-CR	3017215-3017246	32	NZ_CP009107	Escherichia coli strain 94-3024 plasmid pO104_H21, complete sequence	141989-142020	10	0.688
NZ_CP011365_2	2.8\|3017215\|32\|NZ_CP011365\|CRISPRCasFinder,CRT,PILER-CR	3017215-3017246	32	NZ_CP028382	Escherichia coli strain RM10466 plasmid pRM10466-1, complete sequence	155197-155228	10	0.688
NZ_CP011365_2	2.8\|3017215\|32\|NZ_CP011365\|CRISPRCasFinder,CRT,PILER-CR	3017215-3017246	32	NZ_CP027343	Escherichia coli strain 2014C-4587 plasmid unnamed, complete sequence	103401-103432	10	0.688
NZ_CP011365_2	2.8\|3017215\|32\|NZ_CP011365\|CRISPRCasFinder,CRT,PILER-CR	3017215-3017246	32	NZ_CP027311	Escherichia coli strain 2014C-4135 plasmid unnamed, complete sequence	50904-50935	10	0.688
NZ_CP011365_2	2.8\|3017215\|32\|NZ_CP011365\|CRISPRCasFinder,CRT,PILER-CR	3017215-3017246	32	NZ_CP027441	Escherichia coli strain 2012C-4502 plasmid unnamed, complete sequence	97903-97934	10	0.688
NZ_CP011365_2	2.8\|3017215\|32\|NZ_CP011365\|CRISPRCasFinder,CRT,PILER-CR	3017215-3017246	32	NZ_CP027585	Escherichia coli strain 00-3076 plasmid unnamed, complete sequence	13352-13383	10	0.688
NZ_CP011365_2	2.8\|3017215\|32\|NZ_CP011365\|CRISPRCasFinder,CRT,PILER-CR	3017215-3017246	32	NZ_CP027370	Escherichia coli strain 2014C-3307 plasmid unnamed2	109572-109603	10	0.688
NZ_CP011365_2	2.8\|3017215\|32\|NZ_CP011365\|CRISPRCasFinder,CRT,PILER-CR	3017215-3017246	32	NZ_CP027453	Escherichia coli strain 2014C-3338 plasmid unnamed, complete sequence	79387-79418	10	0.688
NZ_CP011365_2	2.8\|3017215\|32\|NZ_CP011365\|CRISPRCasFinder,CRT,PILER-CR	3017215-3017246	32	NZ_CP027451	Escherichia coli strain 2014C-3097 plasmid unnamed2, complete sequence	10648-10679	10	0.688
NZ_CP011365_2	2.8\|3017215\|32\|NZ_CP011365\|CRISPRCasFinder,CRT,PILER-CR	3017215-3017246	32	NZ_CP027372	Escherichia coli strain 2015C-3905 plasmid unnamed	102888-102919	10	0.688
NZ_CP011365_2	2.8\|3017215\|32\|NZ_CP011365\|CRISPRCasFinder,CRT,PILER-CR	3017215-3017246	32	NZ_CP028121	Escherichia coli O43 str. RM10042 plasmid pRM10042-2, complete sequence	49990-50021	10	0.688
NZ_CP011365_2	2.8\|3017215\|32\|NZ_CP011365\|CRISPRCasFinder,CRT,PILER-CR	3017215-3017246	32	NC_007365	Escherichia coli EH41 plasmid pO113, complete sequence	160071-160102	10	0.688
NZ_CP011365_2	2.8\|3017215\|32\|NZ_CP011365\|CRISPRCasFinder,CRT,PILER-CR	3017215-3017246	32	NZ_CP023542	Escherichia coli O104:H21 str. CFSAN002236 strain ATCC BAA-178 plasmid pO104_H21, complete sequence	141994-142025	10	0.688
NZ_CP011365_2	2.8\|3017215\|32\|NZ_CP011365\|CRISPRCasFinder,CRT,PILER-CR	3017215-3017246	32	NZ_CP010192	Escherichia coli strain M8 plasmid A, complete genome	74522-74553	10	0.688
NZ_CP011365_2	2.8\|3017215\|32\|NZ_CP011365\|CRISPRCasFinder,CRT,PILER-CR	3017215-3017246	32	NZ_CP023164	Escherichia coli O22:H8 strain RM10809-3 plasmid pRM10809-3, complete sequence	35202-35233	10	0.688
NZ_CP011365_2	2.10\|3017337\|32\|NZ_CP011365\|CRISPRCasFinder,CRT,PILER-CR	3017337-3017368	32	KX119175	Helicobacter phage Pt22899G, complete genome	5088-5119	10	0.688
NZ_CP011365_2	2.10\|3017337\|32\|NZ_CP011365\|CRISPRCasFinder,CRT,PILER-CR	3017337-3017368	32	KX119175	Helicobacter phage Pt22899G, complete genome	16950-16981	10	0.688
NZ_CP011365_2	2.10\|3017337\|32\|NZ_CP011365\|CRISPRCasFinder,CRT,PILER-CR	3017337-3017368	32	JF734911	Helicobacter phage phiHP33, complete genome	19807-19838	10	0.688
NZ_CP011365_2	2.10\|3017337\|32\|NZ_CP011365\|CRISPRCasFinder,CRT,PILER-CR	3017337-3017368	32	KX119200	Helicobacter phage FrMEG235U, complete genome	14594-14625	10	0.688
NZ_CP011365_2	2.10\|3017337\|32\|NZ_CP011365\|CRISPRCasFinder,CRT,PILER-CR	3017337-3017368	32	KX119200	Helicobacter phage FrMEG235U, complete genome	19690-19721	10	0.688
NZ_CP011365_2	2.10\|3017337\|32\|NZ_CP011365\|CRISPRCasFinder,CRT,PILER-CR	3017337-3017368	32	KX119201	Helicobacter phage FrANT170U, complete genome	14594-14625	10	0.688
NZ_CP011365_2	2.10\|3017337\|32\|NZ_CP011365\|CRISPRCasFinder,CRT,PILER-CR	3017337-3017368	32	KX119201	Helicobacter phage FrANT170U, complete genome	19690-19721	10	0.688
NZ_CP011365_2	2.10\|3017337\|32\|NZ_CP011365\|CRISPRCasFinder,CRT,PILER-CR	3017337-3017368	32	KX119179	Helicobacter phage Pt5303G mobile element protein and transposase genes, complete cds	1261-1292	10	0.688
NZ_CP011365_2	2.15\|3017642\|32\|NZ_CP011365\|CRISPRCasFinder,CRT,PILER-CR	3017642-3017673	32	NZ_CP029777	Deinococcus actinosclerus strain Deinococcus actinosclerus SJTR plasmid unnamed3, complete sequence	171558-171589	10	0.688
NZ_CP011365_2	2.7\|3017154\|32\|NZ_CP011365\|CRISPRCasFinder,CRT,PILER-CR	3017154-3017185	32	NZ_CP015094	Pelagibaca abyssi strain JLT2014 plasmid pPABY6, complete sequence	53594-53625	11	0.656

1. spacer 1.2|3006387|32|NZ_CP011365|CRISPRCasFinder,CRT matches to NZ_CP044185 (Salmonella enterica subsp. enterica strain AR-0403 plasmid pAR-0403) position: , mismatch: 0, identity: 1.0

ggccgatgggcggatatccaggcgttgtgcga	CRISPR spacer
ggccgatgggcggatatccaggcgttgtgcga	Protospacer
********************************

2. spacer 1.13|3006389|32|NZ_CP011365|PILER-CR matches to NZ_CP044185 (Salmonella enterica subsp. enterica strain AR-0403 plasmid pAR-0403) position: , mismatch: 0, identity: 1.0

ggccgatgggcggatatccaggcgttgtgcga	CRISPR spacer
ggccgatgggcggatatccaggcgttgtgcga	Protospacer
********************************

3. spacer 1.2|3006387|32|NZ_CP011365|CRISPRCasFinder,CRT matches to NZ_CP029990 (Salmonella enterica subsp. diarizonae serovar 48:i:z strain SA20121591 plasmid pSA20121591.1, complete sequence) position: , mismatch: 1, identity: 0.969

ggccgatgggcggatatccaggcgttgtgcga	CRISPR spacer
ggccgatgggcgaatatccaggcgttgtgcga	Protospacer
************.*******************

4. spacer 1.2|3006387|32|NZ_CP011365|CRISPRCasFinder,CRT matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.969

ggccgatgggcggatatccaggcgttgtgcga	CRISPR spacer
ggccgatgggcgaatatccaggcgttgtgcga	Protospacer
************.*******************

5. spacer 1.2|3006387|32|NZ_CP011365|CRISPRCasFinder,CRT matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.969

ggccgatgggcggatatccaggcgttgtgcga	CRISPR spacer
ggccgatgggcgaatatccaggcgttgtgcga	Protospacer
************.*******************

6. spacer 1.2|3006387|32|NZ_CP011365|CRISPRCasFinder,CRT matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.969

ggccgatgggcggatatccaggcgttgtgcga	CRISPR spacer
ggccgatgggcgaatatccaggcgttgtgcga	Protospacer
************.*******************

7. spacer 1.13|3006389|32|NZ_CP011365|PILER-CR matches to NZ_CP029990 (Salmonella enterica subsp. diarizonae serovar 48:i:z strain SA20121591 plasmid pSA20121591.1, complete sequence) position: , mismatch: 1, identity: 0.969

ggccgatgggcggatatccaggcgttgtgcga	CRISPR spacer
ggccgatgggcgaatatccaggcgttgtgcga	Protospacer
************.*******************

8. spacer 1.13|3006389|32|NZ_CP011365|PILER-CR matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.969

ggccgatgggcggatatccaggcgttgtgcga	CRISPR spacer
ggccgatgggcgaatatccaggcgttgtgcga	Protospacer
************.*******************

9. spacer 1.13|3006389|32|NZ_CP011365|PILER-CR matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.969

ggccgatgggcggatatccaggcgttgtgcga	CRISPR spacer
ggccgatgggcgaatatccaggcgttgtgcga	Protospacer
************.*******************

10. spacer 1.13|3006389|32|NZ_CP011365|PILER-CR matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.969

ggccgatgggcggatatccaggcgttgtgcga	CRISPR spacer
ggccgatgggcgaatatccaggcgttgtgcga	Protospacer
************.*******************

11. spacer 2.11|3017398|32|NZ_CP011365|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009113 (Rhodococcus opacus strain 1CP plasmid pR1CP2, complete sequence) position: , mismatch: 6, identity: 0.812

atgccgac--cctgactgcaatcatggtcagcgc	CRISPR spacer
--cccgacgacccggctgcaatcatggtcagcga	Protospacer
   *****  **.*.******************

12. spacer 1.2|3006387|32|NZ_CP011365|CRISPRCasFinder,CRT matches to NZ_CP040720 (Rhodococcus pyridinivorans strain YF3 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

ggccgatgggcggatatccaggcgttgtgcga	CRISPR spacer
cggcggtgggcggagatccaggcgtttctcga	Protospacer
 * **.******** *********** . ***

13. spacer 1.13|3006389|32|NZ_CP011365|PILER-CR matches to NZ_CP040720 (Rhodococcus pyridinivorans strain YF3 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

ggccgatgggcggatatccaggcgttgtgcga	CRISPR spacer
cggcggtgggcggagatccaggcgtttctcga	Protospacer
 * **.******** *********** . ***

14. spacer 2.3|3016910|32|NZ_CP011365|CRISPRCasFinder,CRT,PILER-CR matches to MH622910 (Caudovirales sp. isolate ctdb_3, complete genome) position: , mismatch: 8, identity: 0.75

ataacctcttgcgtgccgtaatgttggtgttt---	CRISPR spacer
ataacttcttgcgtgccgta---ctgacgcttgaa	Protospacer
*****.**************   .**..*.**

15. spacer 2.15|3017642|32|NZ_CP011365|CRISPRCasFinder,CRT,PILER-CR matches to NC_024970 (Streptomyces aureofaciens strain CCM3239 plasmid pSA3239, complete sequence) position: , mismatch: 8, identity: 0.75

--ggactgtctgtgcagcgcgtccagcgcctgcg	CRISPR spacer
cagggcca--cgtgcagcgcgtcgagcgcccgcg	Protospacer
  **.*..  .************ ******.***

16. spacer 2.15|3017642|32|NZ_CP011365|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KJ396772 (Streptomyces lavendulae subsp. lavendulae strain CCM3239 plasmid pSA3239, complete sequence) position: , mismatch: 8, identity: 0.75

--ggactgtctgtgcagcgcgtccagcgcctgcg	CRISPR spacer
cagggcca--cgtgcagcgcgtcgagcgcccgcg	Protospacer
  **.*..  .************ ******.***

17. spacer 2.15|3017642|32|NZ_CP011365|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012940 (Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ggactgtctgtgcagcgcgtccagcgcctgcg	CRISPR spacer
cgccacgcggtgcagcgcgtcgagcgactgcg	Protospacer
 * *   * ************ **** *****

18. spacer 2.15|3017642|32|NZ_CP011365|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012944 (Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ggactgtctgtgcagcgcgtccagcgcctgcg	CRISPR spacer
cgccacgcggtgcagcgcgtcgagcgactgcg	Protospacer
 * *   * ************ **** *****

19. spacer 2.15|3017642|32|NZ_CP011365|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024986 (Streptomyces lavendulae subsp. lavendulae strain CCM 3239 plasmid pSA3239, complete sequence) position: , mismatch: 8, identity: 0.75

--ggactgtctgtgcagcgcgtccagcgcctgcg	CRISPR spacer
cagggcca--cgtgcagcgcgtcgagcgcccgcg	Protospacer
  **.*..  .************ ******.***

20. spacer 2.15|3017642|32|NZ_CP011365|CRISPRCasFinder,CRT,PILER-CR matches to NC_017575 (Ralstonia solanacearum Po82 megaplasmid, complete sequence) position: , mismatch: 8, identity: 0.75

ggactgtctgtgcagcgcgtccagcgcctgcg	CRISPR spacer
cgccacgcggtgcagcgcgtcgagcgactgcg	Protospacer
 * *   * ************ **** *****

21. spacer 2.15|3017642|32|NZ_CP011365|CRISPRCasFinder,CRT,PILER-CR matches to NC_017805 (Deinococcus gobiensis I-0 plasmid P1, complete sequence) position: , mismatch: 8, identity: 0.75

----ggactgtctgtgcagcgcgtccagcgcctgcg	CRISPR spacer
ctctgga----tcgtgcagctcggccagcgcctgcg	Protospacer
    ***    ..******* ** ************

22. spacer 2.15|3017642|32|NZ_CP011365|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026308 (Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ggactgtctgtgcagcgcgtccagcgcctgcg	CRISPR spacer
cgccacgcggtgcagcgcgtcgagcgactgcg	Protospacer
 * *   * ************ **** *****

23. spacer 2.15|3017642|32|NZ_CP011365|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP051295 (Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence) position: , mismatch: 8, identity: 0.75

ggactgtctgtgcagcgcgtccagcgcctgcg	CRISPR spacer
cgccacgcggtgcagcgcgtcgagcgactgcg	Protospacer
 * *   * ************ **** *****

24. spacer 2.15|3017642|32|NZ_CP011365|CRISPRCasFinder,CRT,PILER-CR matches to MN536027 (Pseudomonas phage vB_Pae-SS2019XII, complete genome) position: , mismatch: 8, identity: 0.75

ggactgtctgtgcagcgcgtccagcgcctgcg	CRISPR spacer
gctcttgctgcgcagcgcctccagcgcctgga	Protospacer
*  **  ***.******* *********** .

25. spacer 1.5|3006570|32|NZ_CP011365|CRISPRCasFinder,CRT matches to NZ_CP021643 (Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence) position: , mismatch: 9, identity: 0.719

tcttttgcaatttacttcagcaattctggttt	CRISPR spacer
aaatgctaaatttacttcagcaaatcttgttt	Protospacer
   * .  *************** *** ****

26. spacer 1.5|3006570|32|NZ_CP011365|CRISPRCasFinder,CRT matches to NZ_CP054613 (Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.719

tcttttgcaatttacttcagcaattctggttt	CRISPR spacer
atttttgcgatttccttcagcaattcgcccgt	Protospacer
 .******.**** ************   . *

27. spacer 1.10|3006875|32|NZ_CP011365|CRISPRCasFinder,CRT matches to AP018321 (Nostoc sp. HK-01 plasmid plasmid3 DNA, complete genome) position: , mismatch: 9, identity: 0.719

ttgctcaggctgtaaaccttactgtagaacgc	CRISPR spacer
atgctaaggctgtaacccttactgaataggca	Protospacer
 **** ********* ******** * *.

28. spacer 1.16|3006572|32|NZ_CP011365|PILER-CR matches to NZ_CP021643 (Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence) position: , mismatch: 9, identity: 0.719

tcttttgcaatttacttcagcaattctggttt	CRISPR spacer
aaatgctaaatttacttcagcaaatcttgttt	Protospacer
   * .  *************** *** ****

29. spacer 1.16|3006572|32|NZ_CP011365|PILER-CR matches to NZ_CP054613 (Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.719

tcttttgcaatttacttcagcaattctggttt	CRISPR spacer
atttttgcgatttccttcagcaattcgcccgt	Protospacer
 .******.**** ************   . *

30. spacer 1.21|3006877|32|NZ_CP011365|PILER-CR matches to AP018321 (Nostoc sp. HK-01 plasmid plasmid3 DNA, complete genome) position: , mismatch: 9, identity: 0.719

ttgctcaggctgtaaaccttactgtagaacgc	CRISPR spacer
atgctaaggctgtaacccttactgaataggca	Protospacer
 **** ********* ******** * *.

31. spacer 2.10|3017337|32|NZ_CP011365|CRISPRCasFinder,CRT,PILER-CR matches to MN694197 (Marine virus AFVG_250M303, complete genome) position: , mismatch: 9, identity: 0.719

tttgtttttactaattcgtttcatcattcccc	CRISPR spacer
tttgtttttactaatacgtttcattccctatt	Protospacer
*************** ********. ... ..

32. spacer 2.11|3017398|32|NZ_CP011365|CRISPRCasFinder,CRT,PILER-CR matches to MN096355 (Mycobacterium phage Purky, complete genome) position: , mismatch: 9, identity: 0.719

atgccgaccctgactgcaatcatggtcagcgc	CRISPR spacer
aggccgaccatgactgcgatcatggcagccag	Protospacer
* ******* *******.*******. . *.

33. spacer 2.15|3017642|32|NZ_CP011365|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049908 (Hymenobacter sp. HDW8 plasmid p_unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

ggactgtctgtgcagcgcgtccagcgcctgcg	CRISPR spacer
aaaggtcttgtgcggcgcgtccagcgcccgcg	Protospacer
..*   ..*****.**************.***

34. spacer 2.15|3017642|32|NZ_CP011365|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013436 (Burkholderia latens strain AU17928 isolate AU17928 plasmid pAU17928, complete sequence) position: , mismatch: 9, identity: 0.719

ggactgtctgtgcagcgcgtccagcgcctgcg	CRISPR spacer
tgttcgatcgtgcagcgtctccagcgcctgcg	Protospacer
 * ..* ..********. *************

35. spacer 2.15|3017642|32|NZ_CP011365|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049813 (Monaibacterium sp. ALG8 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

ggactgtctgtgcagcgcgtccagcgcctgcg	CRISPR spacer
gtgatagatgtgcagcgcgttcagggcctgca	Protospacer
* . *.  ************.*** ******.

36. spacer 2.17|3017764|32|NZ_CP011365|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014361 (Methylomonas sp. DH-1 plasmid, complete sequence) position: , mismatch: 9, identity: 0.719

tttacttcaccgtcctgaagcattttaacagt	CRISPR spacer
catatttcaccatcctgaagcattttcgcttg	Protospacer
. **.******.************** .*

37. spacer 1.4|3006509|32|NZ_CP011365|CRISPRCasFinder,CRT matches to NZ_CP042332 (Bosea sp. F3-2 plasmid pB32-1, complete sequence) position: , mismatch: 10, identity: 0.688

agttacaccgacagccgtaacccgttcgatat	CRISPR spacer
gtcgccaccgacagccgttacccggtcggtca	Protospacer
. .  ************* ***** ***.*

38. spacer 1.10|3006875|32|NZ_CP011365|CRISPRCasFinder,CRT matches to MG592456 (Vibrio phage 1.081.O._10N.286.52.C2, partial genome) position: , mismatch: 10, identity: 0.688

ttgctcaggctgtaaaccttactgtagaacgc	CRISPR spacer
ttgctcaggctgttaacgttactcagccgttc	Protospacer
************* *** *****  .  .. *

39. spacer 1.15|3006511|32|NZ_CP011365|PILER-CR matches to NZ_CP042332 (Bosea sp. F3-2 plasmid pB32-1, complete sequence) position: , mismatch: 10, identity: 0.688

agttacaccgacagccgtaacccgttcgatat	CRISPR spacer
gtcgccaccgacagccgttacccggtcggtca	Protospacer
. .  ************* ***** ***.*

40. spacer 1.21|3006877|32|NZ_CP011365|PILER-CR matches to MG592456 (Vibrio phage 1.081.O._10N.286.52.C2, partial genome) position: , mismatch: 10, identity: 0.688

ttgctcaggctgtaaaccttactgtagaacgc	CRISPR spacer
ttgctcaggctgttaacgttactcagccgttc	Protospacer
************* *** *****  .  .. *

41. spacer 2.3|3016910|32|NZ_CP011365|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP043499 (Rhizobium grahamii strain BG7 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

ataacctcttgcgtgccgtaatgttggtgttt	CRISPR spacer
ccgccttcttgcgcgccgtaatgtcggtgagc	Protospacer
 .. *.*******.**********.****  .

42. spacer 2.8|3017215|32|NZ_CP011365|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031899 (Escherichia coli O113:H21 strain FWSEC0010 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

cccgcgttgttccggttgttcccggatcggtc	CRISPR spacer
ccggcgttgttcaggttgttcccttttattgt	Protospacer
** ********* **********   *    .

43. spacer 2.8|3017215|32|NZ_CP011365|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KM085450 (Escherichia coli O104:H21 strain 94-3024 plasmid pO104_H21, complete sequence) position: , mismatch: 10, identity: 0.688

cccgcgttgttccggttgttcccggatcggtc	CRISPR spacer
ccggcgttgttcaggttgttcccttttattgt	Protospacer
** ********* **********   *    .

44. spacer 2.8|3017215|32|NZ_CP011365|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009107 (Escherichia coli strain 94-3024 plasmid pO104_H21, complete sequence) position: , mismatch: 10, identity: 0.688

cccgcgttgttccggttgttcccggatcggtc	CRISPR spacer
ccggcgttgttcaggttgttcccttttattgt	Protospacer
** ********* **********   *    .

45. spacer 2.8|3017215|32|NZ_CP011365|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP028382 (Escherichia coli strain RM10466 plasmid pRM10466-1, complete sequence) position: , mismatch: 10, identity: 0.688

cccgcgttgttccggttgttcccggatcggtc	CRISPR spacer
ccggcgttgttcaggttgttcccttttattgt	Protospacer
** ********* **********   *    .

46. spacer 2.8|3017215|32|NZ_CP011365|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP027343 (Escherichia coli strain 2014C-4587 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

cccgcgttgttccggttgttcccggatcggtc	CRISPR spacer
ccggcgttgttcaggttgttcccttttattgt	Protospacer
** ********* **********   *    .

47. spacer 2.8|3017215|32|NZ_CP011365|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP027311 (Escherichia coli strain 2014C-4135 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

cccgcgttgttccggttgttcccggatcggtc	CRISPR spacer
ccggcgttgttcaggttgttcccttttattgt	Protospacer
** ********* **********   *    .

48. spacer 2.8|3017215|32|NZ_CP011365|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP027441 (Escherichia coli strain 2012C-4502 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

cccgcgttgttccggttgttcccggatcggtc	CRISPR spacer
ccggcgttgttcaggttgttcccttttattgt	Protospacer
** ********* **********   *    .

49. spacer 2.8|3017215|32|NZ_CP011365|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP027585 (Escherichia coli strain 00-3076 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

cccgcgttgttccggttgttcccggatcggtc	CRISPR spacer
ccggcgttgttcaggttgttcccttttattgt	Protospacer
** ********* **********   *    .

50. spacer 2.8|3017215|32|NZ_CP011365|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP027370 (Escherichia coli strain 2014C-3307 plasmid unnamed2) position: , mismatch: 10, identity: 0.688

cccgcgttgttccggttgttcccggatcggtc	CRISPR spacer
ccggcgttgttcaggttgttcccttttattgt	Protospacer
** ********* **********   *    .

51. spacer 2.8|3017215|32|NZ_CP011365|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP027453 (Escherichia coli strain 2014C-3338 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

cccgcgttgttccggttgttcccggatcggtc	CRISPR spacer
ccggcgttgttcaggttgttcccttttattgt	Protospacer
** ********* **********   *    .

52. spacer 2.8|3017215|32|NZ_CP011365|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP027451 (Escherichia coli strain 2014C-3097 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.688

cccgcgttgttccggttgttcccggatcggtc	CRISPR spacer
ccggcgttgttcaggttgttcccttttattgt	Protospacer
** ********* **********   *    .

53. spacer 2.8|3017215|32|NZ_CP011365|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP027372 (Escherichia coli strain 2015C-3905 plasmid unnamed) position: , mismatch: 10, identity: 0.688

cccgcgttgttccggttgttcccggatcggtc	CRISPR spacer
ccggcgttgttcaggttgttcccttttattgt	Protospacer
** ********* **********   *    .

54. spacer 2.8|3017215|32|NZ_CP011365|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP028121 (Escherichia coli O43 str. RM10042 plasmid pRM10042-2, complete sequence) position: , mismatch: 10, identity: 0.688

cccgcgttgttccggttgttcccggatcggtc	CRISPR spacer
ccggcgttgttcaggttgttcccttttattgt	Protospacer
** ********* **********   *    .

55. spacer 2.8|3017215|32|NZ_CP011365|CRISPRCasFinder,CRT,PILER-CR matches to NC_007365 (Escherichia coli EH41 plasmid pO113, complete sequence) position: , mismatch: 10, identity: 0.688

cccgcgttgttccggttgttcccggatcggtc	CRISPR spacer
ccggcgttgttcaggttgttcccttttattgt	Protospacer
** ********* **********   *    .

56. spacer 2.8|3017215|32|NZ_CP011365|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023542 (Escherichia coli O104:H21 str. CFSAN002236 strain ATCC BAA-178 plasmid pO104_H21, complete sequence) position: , mismatch: 10, identity: 0.688

cccgcgttgttccggttgttcccggatcggtc	CRISPR spacer
ccggcgttgttcaggttgttcccttttattgt	Protospacer
** ********* **********   *    .

57. spacer 2.8|3017215|32|NZ_CP011365|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010192 (Escherichia coli strain M8 plasmid A, complete genome) position: , mismatch: 10, identity: 0.688

cccgcgttgttccggttgttcccggatcggtc	CRISPR spacer
ccggcgttgttcaggttgttcccttttattgt	Protospacer
** ********* **********   *    .

58. spacer 2.8|3017215|32|NZ_CP011365|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023164 (Escherichia coli O22:H8 strain RM10809-3 plasmid pRM10809-3, complete sequence) position: , mismatch: 10, identity: 0.688

cccgcgttgttccggttgttcccggatcggtc	CRISPR spacer
ccggcgttgttcaggttgttcccttttattgt	Protospacer
** ********* **********   *    .

59. spacer 2.10|3017337|32|NZ_CP011365|CRISPRCasFinder,CRT,PILER-CR matches to KX119175 (Helicobacter phage Pt22899G, complete genome) position: , mismatch: 10, identity: 0.688

tttgtttttactaattcgtttcatcattcccc	CRISPR spacer
aaggtttttactaagtcgtttaatcaaaggca	Protospacer
   *********** ****** ****    *

60. spacer 2.10|3017337|32|NZ_CP011365|CRISPRCasFinder,CRT,PILER-CR matches to KX119175 (Helicobacter phage Pt22899G, complete genome) position: , mismatch: 10, identity: 0.688

tttgtttttactaattcgtttcatcattcccc	CRISPR spacer
aaggtttttactaagtcgtttaatcaaaggca	Protospacer
   *********** ****** ****    *

61. spacer 2.10|3017337|32|NZ_CP011365|CRISPRCasFinder,CRT,PILER-CR matches to JF734911 (Helicobacter phage phiHP33, complete genome) position: , mismatch: 10, identity: 0.688

tttgtttttactaattcgtttcatcattcccc	CRISPR spacer
aaggtttttactaagtcgtttaatcaaaggca	Protospacer
   *********** ****** ****    *

62. spacer 2.10|3017337|32|NZ_CP011365|CRISPRCasFinder,CRT,PILER-CR matches to KX119200 (Helicobacter phage FrMEG235U, complete genome) position: , mismatch: 10, identity: 0.688

tttgtttttactaattcgtttcatcattcccc	CRISPR spacer
aaggtttttactaagtcgtttaatcaaaggca	Protospacer
   *********** ****** ****    *

63. spacer 2.10|3017337|32|NZ_CP011365|CRISPRCasFinder,CRT,PILER-CR matches to KX119200 (Helicobacter phage FrMEG235U, complete genome) position: , mismatch: 10, identity: 0.688

tttgtttttactaattcgtttcatcattcccc	CRISPR spacer
aaggtttttactaagtcgtttaatcaaaggca	Protospacer
   *********** ****** ****    *

64. spacer 2.10|3017337|32|NZ_CP011365|CRISPRCasFinder,CRT,PILER-CR matches to KX119201 (Helicobacter phage FrANT170U, complete genome) position: , mismatch: 10, identity: 0.688

tttgtttttactaattcgtttcatcattcccc	CRISPR spacer
aaggtttttactaagtcgtttaatcaaaggca	Protospacer
   *********** ****** ****    *

65. spacer 2.10|3017337|32|NZ_CP011365|CRISPRCasFinder,CRT,PILER-CR matches to KX119201 (Helicobacter phage FrANT170U, complete genome) position: , mismatch: 10, identity: 0.688

tttgtttttactaattcgtttcatcattcccc	CRISPR spacer
aaggtttttactaagtcgtttaatcaaaggca	Protospacer
   *********** ****** ****    *

66. spacer 2.10|3017337|32|NZ_CP011365|CRISPRCasFinder,CRT,PILER-CR matches to KX119179 (Helicobacter phage Pt5303G mobile element protein and transposase genes, complete cds) position: , mismatch: 10, identity: 0.688

tttgtttttactaattcgtttcatcattcccc	CRISPR spacer
aaggtttttactaagtcgtttaatcaaaggca	Protospacer
   *********** ****** ****    *

67. spacer 2.15|3017642|32|NZ_CP011365|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029777 (Deinococcus actinosclerus strain Deinococcus actinosclerus SJTR plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.688

ggactgtctgtgcagcgcgtccagcgcctgcg	CRISPR spacer
ctcgcggctgtgcagggcgtgcagcgcctgac	Protospacer
    .* ******** **** *********

68. spacer 2.7|3017154|32|NZ_CP011365|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015094 (Pelagibaca abyssi strain JLT2014 plasmid pPABY6, complete sequence) position: , mismatch: 11, identity: 0.656

ggcgaccaaaattatcacgccagcgttactgg	CRISPR spacer
atcgaccagaattatcacgccggcggcttctt	Protospacer
. ******.************.*** . ..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

2025811 : 2033044

Morganella_phage(33.33%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_017441840.1\|2025811_2027242_-	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	1.0e-104	57.4
WP_017441839.1\|2027315_2028011_-	phosphohydrolase	A0A1D6Y7U0	Golden_Marseillevirus	2.8e-07	27.1
WP_000107435.1\|2028090_2028402_-	hypothetical protein	NA	NA	NA	NA
WP_017441838.1\|2029052_2030237_+	porin OmpS1	Q1MVN1	Enterobacteria_phage	5.1e-110	57.1
WP_024131109.1\|2030496_2030685_-	hypothetical protein	NA	NA	NA	NA
WP_000208509.1\|2030695_2030908_-	cold-shock protein	A0A1W6JNX5	Morganella_phage	3.9e-21	70.0
WP_017441837.1\|2031353_2032622_-	Y-family DNA polymerase	I6RSM4	Salmonella_phage	1.9e-227	92.2
WP_000394197.1\|2032624_2033044_-	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	8.5e-36	60.5

DBSCAN-SWA_2

2431926 : 2497585

Salmonella_phage(55.0%)

integrase,protease,holin,coat,lysis,tRNA,portal,terminase

attL 2457229:2457245|attR 2479092:2479108

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000016631.1\|2431926_2432739_-\|tRNA	tRNA pseudouridine(38-40) synthase TruA	NA	NA	NA	NA
WP_001289141.1\|2432738_2433752_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_017441454.1\|2433819_2434956_-	4-phosphoerythronate dehydrogenase PdxB	A0A2R8FDS8	Brazilian_cedratvirus	6.5e-22	29.1
WP_017441453.1\|2435059_2436061_+	flagella biosynthesis regulator Flk	NA	NA	NA	NA
WP_000127731.1\|2436057_2437236_-	MFS transporter	NA	NA	NA	NA
WP_001051266.1\|2437415_2437790_-	hypothetical protein	NA	NA	NA	NA
WP_000433427.1\|2437962_2438211_+	transcriptional regulator	A0A0M4UV99	Ralstonia_phage	2.3e-17	58.6
WP_017441452.1\|2438379_2438748_+	C40 family peptidase	H6SUH4	Campylobacter_virus	3.9e-08	37.9
WP_017441451.1\|2438747_2439266_+	YbjP/YqhG family protein	NA	NA	NA	NA
WP_001142914.1\|2439332_2439989_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_000817161.1\|2440086_2441301_-	beta-ketoacyl-ACP synthase I	NA	NA	NA	NA
WP_017441450.1\|2441460_2443461_+\|tRNA	bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC	NA	NA	NA	NA
WP_000559749.1\|2443512_2443788_-	YfcL family protein	NA	NA	NA	NA
WP_001089211.1\|2443820_2444369_-	elongation factor P hydroxylase	NA	NA	NA	NA
WP_000368599.1\|2444368_2445178_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA
WP_000750429.1\|2445177_2446002_-	penicillin-insensitive murein endopeptidase	NA	NA	NA	NA
WP_000918457.1\|2446005_2447091_-	chorismate synthase	A0A291AU41	Pandoravirus	9.1e-90	47.8
WP_001650203.1\|2447126_2448059_-	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA
WP_000730794.1\|2448224_2448776_+	endonuclease SmrB	NA	NA	NA	NA
WP_001195800.1\|2448875_2449361_-	phosphohistidine phosphatase SixA	NA	NA	NA	NA
WP_017441449.1\|2449569_2451717_-	fatty acid oxidation complex subunit alpha FadJ	NA	NA	NA	NA
WP_001248126.1\|2451716_2453027_-	acetyl-CoA C-acyltransferase FadI	NA	NA	NA	NA
WP_000030904.1\|2453204_2453489_-	YfcZ/YiiS family protein	NA	NA	NA	NA
WP_001549822.1\|2453859_2455167_+	long-chain fatty acid transporter FadL	NA	NA	NA	NA
WP_000776787.1\|2455227_2455983_-	phospholipid-binding lipoprotein MlaA	NA	NA	NA	NA
WP_017441448.1\|2456271_2457213_+	formate/nitrite transporter family protein	E7DYY8	Enterobacteria_phage	9.2e-147	87.8
2457229:2457245	attL	NA	NA	NA	NA
WP_046735902.1\|2457526_2458696_+\|integrase	tyrosine-type recombinase/integrase	I6R0M2	Salmonella_phage	9.1e-229	99.5
WP_023138702.1\|2458830_2459193_+	GtrA family protein	I1TED9	Salmonella_phage	6.2e-51	82.5
WP_023138703.1\|2459189_2460116_+	glycosyltransferase family 2 protein	I1TED8	Salmonella_phage	2.2e-161	92.8
WP_024137322.1\|2460105_2461560_+	hypothetical protein	NA	NA	NA	NA
WP_017441443.1\|2461591_2463379_-	hypothetical protein	I6S5Y0	Salmonella_phage	3.1e-58	88.3
WP_000275950.1\|2463618_2463939_+	hypothetical protein	NA	NA	NA	NA
WP_024137321.1\|2463947_2465951_-	hypothetical protein	A0A2I7QW93	Vibrio_phage	2.0e-98	36.9
WP_017441440.1\|2465950_2467366_-	DNA transfer protein	I6RSG0	Salmonella_phage	4.1e-191	76.7
WP_017441439.1\|2467376_2468066_-	hypothetical protein	E7C9U4	Salmonella_phage	1.3e-105	99.1
WP_017441438.1\|2468068_2468530_-	DUF2824 family protein	C6ZR15	Salmonella_phage	4.3e-73	84.9
WP_017441437.1\|2468529_2469231_-	hypothetical protein	C6ZR14	Salmonella_phage	6.3e-68	91.8
WP_017441436.1\|2469223_2469757_-	HNH endonuclease	A0A1V0E5R7	Salmonella_phage	7.0e-35	47.7
WP_017441435.1\|2469778_2471197_-	Packaged DNA stabilization protein gp10	Q9AYZ4	Salmonella_phage	1.5e-249	89.4
WP_010835893.1\|2471156_2471657_-	packaged DNA stabilization gp4 family protein	I1TEJ0	Salmonella_phage	3.2e-90	100.0
WP_000538675.1\|2471640_2472201_-	hypothetical protein	I6S1J7	Salmonella_phage	7.0e-102	98.4
WP_020899473.1\|2472241_2473534_-\|coat	coat protein	C6ZR10	Salmonella_phage	3.2e-243	99.3
WP_017441433.1\|2473533_2474445_-	scaffold protein	A0A1R3Y5R6	Salmonella_virus	1.1e-160	99.7
WP_017441432.1\|2474458_2476636_-\|portal	portal protein	I6R968	Salmonella_phage	0.0e+00	98.2
WP_017441431.1\|2476635_2478135_-\|terminase	terminase large subunit	A0A0M4S5Z3	Salmonella_phage	3.1e-306	99.6
WP_000729924.1\|2478112_2478601_-	DNA-packaging protein	A8CGG1	Salmonella_phage	2.9e-88	100.0
WP_017441430.1\|2478604_2479009_-	hypothetical protein	C6ZR73	Salmonella_phage	1.5e-66	99.3
WP_000807793.1\|2479011_2479254_-	DUF2560 family protein	A0A1R3Y5V5	Salmonella_virus	1.7e-36	100.0
2479092:2479108	attR	NA	NA	NA	NA
WP_017441429.1\|2479357_2479738_-	hypothetical protein	Q716B1	Shigella_phage	1.0e-64	97.6
WP_001016386.1\|2480022_2480541_-	Rha family transcriptional regulator	A0A2D1GLJ3	Escherichia_phage	3.2e-93	100.0
WP_001139680.1\|2480743_2480896_-	hypothetical protein	K7PKL2	Enterobacteria_phage	1.2e-21	100.0
WP_017441428.1\|2480883_2481351_-\|lysis	lysis protein	A0A291AWW3	Escherichia_phage	9.4e-68	87.7
WP_017441427.1\|2481347_2481785_-	lysozyme	Q5G8R3	Enterobacteria_phage	8.2e-74	97.9
WP_000738703.1\|2481768_2482095_-\|holin	phage holin, lambda family	Q5G8R5	Enterobacteria_phage	1.7e-52	100.0
WP_017441426.1\|2482328_2482526_-	hypothetical protein	NA	NA	NA	NA
WP_001235449.1\|2482799_2483423_-	antitermination protein	C6ZR62	Salmonella_phage	3.4e-113	98.6
WP_000219138.1\|2483419_2483599_-	hypothetical protein	A0A1V0E5I7	Salmonella_phage	7.1e-24	100.0
WP_000149926.1\|2483579_2483783_-	phage NinH family protein	Q5G8R8	Enterobacteria_phage	7.2e-33	100.0
WP_001014910.1\|2483779_2484175_-	RusA family crossover junction endodeoxyribonuclease	A0A0M4REJ2	Salmonella_phage	1.4e-69	96.9
WP_000566853.1\|2484430_2484607_-	protein ninF	A0A0M4S6T3	Salmonella_phage	1.0e-27	96.6
WP_000113764.1\|2484603_2484780_-	NinE family protein	I6RSI9	Salmonella_phage	4.3e-26	96.6
WP_000679702.1\|2484746_2484920_-	hypothetical protein	C6ZR56	Salmonella_phage	5.2e-32	100.0
WP_000736922.1\|2484916_2485354_-	recombination protein NinB	C6ZR55	Salmonella_phage	7.7e-80	100.0
WP_001064628.1\|2485427_2485706_-	hypothetical protein	C6ZR54	Salmonella_phage	5.2e-50	100.0
WP_024132273.1\|2485706_2487587_-	toprim domain-containing protein	Q5G8S8	Enterobacteria_phage	0.0e+00	97.9
WP_000067066.1\|2487694_2488555_-	replication protein	K7PL20	Enterobacteria_phage	1.1e-159	99.7
WP_001125982.1\|2488547_2488694_-	DUF2740 family protein	A0A0M4S617	Salmonella_phage	1.9e-19	100.0
WP_001103492.1\|2488728_2489010_-	hypothetical protein	Q76H54	Enterobacteria_phage	4.3e-44	100.0
WP_000447947.1\|2489120_2489336_-	helix-turn-helix transcriptional regulator	Q716D6	Shigella_phage	1.1e-18	69.0
WP_023138238.1\|2489436_2490069_+	helix-turn-helix domain-containing protein	A0A1I9KG86	Aeromonas_phage	2.8e-30	43.0
WP_017441420.1\|2490451_2490784_+	hypothetical protein	A0A1R3Y5R1	Salmonella_virus	3.9e-52	95.5
WP_017441419.1\|2490792_2491263_+	hypothetical protein	A0A1I9LJN4	Stx_converting_phage	5.3e-87	98.1
WP_000401881.1\|2491422_2491677_+	hypothetical protein	NA	NA	NA	NA
WP_023242791.1\|2491762_2491897_+	hypothetical protein	K7PHK2	Enterobacteria_phage	2.1e-09	78.0
WP_001181693.1\|2491881_2492076_+	hypothetical protein	NA	NA	NA	NA
WP_162839704.1\|2492075_2492231_+	hypothetical protein	A0A192Y6P5	Salmonella_phage	8.0e-08	60.0
WP_017441418.1\|2492359_2493067_+	recombinase	A0A2H4FN95	Salmonella_phage	1.3e-134	97.0
WP_001253476.1\|2493066_2493351_+	sigma-70 family RNA polymerase sigma factor	Q76H41	Enterobacteria_phage	1.4e-45	100.0
WP_017441417.1\|2493397_2493691_+	DUF2856 family protein	A0A2H4FNA1	Salmonella_phage	1.4e-48	96.9
WP_001214771.1\|2493701_2493872_+	DUF2737 family protein	A0A220NQV6	Salmonella_phage	6.1e-25	100.0
WP_001748035.1\|2493868_2494279_+	hypothetical protein	A0A1R3Y5S0	Salmonella_virus	5.7e-69	94.1
WP_017441416.1\|2494275_2494908_+	ead/Ea22-like family protein	A0A1R3Y5T1	Salmonella_virus	2.1e-25	44.5
WP_017441415.1\|2494909_2495167_+	hypothetical protein	A0A192Y5W0	Salmonella_phage	5.9e-40	95.3
WP_017441413.1\|2496138_2496405_+	hypothetical protein	A0A1V0E5L9	Salmonella_phage	1.1e-44	96.6
WP_024137319.1\|2496649_2497285_+	hypothetical protein	A0A075B8I7	Enterobacteria_phage	6.3e-107	88.2
WP_017441412.1\|2497381_2497585_+	excisionase	C6ZR24	Salmonella_phage	4.7e-32	95.5

DBSCAN-SWA_3

2727579 : 2839757

105

Salmonella_phage(70.18%)

integrase,capsid,tail,plate,transposase,holin,tRNA,portal,head,terminase

attL 2789887:2789904|attR 2840152:2840169

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000083347.1\|2727579_2728317_-\|tRNA	tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN	NA	NA	NA	NA
WP_000219174.1\|2728446_2729781_+	ATP-dependent RNA helicase SrmB	A0A1B1IS59	uncultured_Mediterranean_phage	1.6e-43	29.7
WP_000365859.1\|2729798_2730698_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_000188414.1\|2730800_2731388_+	cysteine/O-acetylserine transporter	NA	NA	NA	NA
WP_000627811.1\|2731449_2731833_-	autonomous glycyl radical cofactor GrcA	Q7Y524	Enterobacteria_phage	6.1e-33	74.0
WP_000179978.1\|2732151_2732841_+	uracil-DNA glycosylase	A0A172DS90	Canid_alphaherpesvirus	4.6e-55	49.5
WP_000997370.1\|2732956_2733994_-\|tRNA	tRNA/rRNA methyltransferase	NA	NA	NA	NA
WP_001098732.1\|2734197_2734617_+	thioredoxin TrxC	A0A0K2FIM3	Achromobacter_phage	1.2e-16	40.6
WP_017442128.1\|2734689_2735370_+\|tRNA	tRNA-uridine aminocarboxypropyltransferase	NA	NA	NA	NA
WP_000082642.1\|2735423_2738084_+	protein lysine acetyltransferase	NA	NA	NA	NA
WP_000949286.1\|2738198_2739554_+	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA
WP_001264473.1\|2739598_2739922_+	YfiM family lipoprotein	NA	NA	NA	NA
WP_000807820.1\|2739918_2741220_-	MFS transporter	Q6JIH2	Burkholderia_virus	9.1e-44	30.6
WP_000985658.1\|2741323_2741779_-	DUF4385 domain-containing protein	E3SMI8	Prochlorococcus_phage	8.6e-34	49.3
WP_001235092.1\|2747697_2750271_-	ATP-dependent chaperone ClpB	H6X3M6	Enterobacteria_phage	2.6e-127	35.5
WP_017442224.1\|2750400_2751132_-	polyphenol oxidase	NA	NA	NA	NA
WP_000079130.1\|2751128_2752109_-	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA	NA	NA	NA
WP_000197660.1\|2752240_2752978_+	outer membrane protein assembly factor BamD	NA	NA	NA	NA
WP_000178449.1\|2753249_2753588_+	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA
WP_010989056.1\|2753691_2753739_+	pheA operon leader peptide PheL	NA	NA	NA	NA
WP_000200080.1\|2753838_2754999_+	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA
WP_017442223.1\|2754959_2755868_-	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA
WP_000225191.1\|2755925_2757047_-	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA
WP_017442222.1\|2757056_2758127_-	3-deoxy-7-phosphoheptulonate synthase AroF	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	2.4e-90	51.8
WP_017442221.1\|2758566_2759085_+	YfiR family protein	NA	NA	NA	NA
WP_017442220.1\|2759077_2760298_+	diguanylate cyclase DgcN	A0A2K8I9Y5	Pseudomonas_phage	5.8e-08	36.2
WP_000065257.1\|2760454_2760802_-	50S ribosomal protein L19	NA	NA	NA	NA
WP_000469807.1\|2760842_2761610_-\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
WP_000043266.1\|2761654_2762203_-	ribosome maturation factor RimM	NA	NA	NA	NA
WP_000256453.1\|2762221_2762470_-	30S ribosomal protein S16	NA	NA	NA	NA
WP_000460052.1\|2762783_2764145_-	signal recognition particle protein	NA	NA	NA	NA
WP_001537507.1\|2764310_2765102_+	inner membrane protein YpjD	NA	NA	NA	NA
WP_127172650.1\|2765121_2766408_+	HlyC/CorC family transporter	NA	NA	NA	NA
WP_001287923.1\|2766527_2767133_+	hypothetical protein	NA	NA	NA	NA
WP_001518875.1\|2767167_2767758_-	nucleotide exchange factor GrpE	NA	NA	NA	NA
WP_001059155.1\|2767882_2768761_+	NAD(+) kinase	NA	NA	NA	NA
WP_000880958.1\|2768846_2770508_+	DNA repair protein RecN	NA	NA	NA	NA
WP_001203445.1\|2770656_2770995_+	outer membrane protein assembly factor BamE	NA	NA	NA	NA
WP_017442219.1\|2771160_2771451_-	RnfH family protein	NA	NA	NA	NA
WP_000242603.1\|2771440_2771917_-	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA
WP_001518569.1\|2772066_2772549_+	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	5.2e-29	47.4
WP_017442218.1\|2773168_2784643_+	biofilm-associated protein BapA	NA	NA	NA	NA
WP_017442217.1\|2784707_2786117_+	TolC family outer membrane protein	NA	NA	NA	NA
WP_017442216.1\|2786113_2788294_+	type I secretion system permease/ATPase	F2Y302	Organic_Lake_phycodnavirus	1.3e-18	34.0
WP_072101449.1\|2788301_2789465_+	HlyD family type I secretion periplasmic adaptor subunit	NA	NA	NA	NA
2789887:2789904	attL	NA	NA	NA	NA
WP_000980498.1\|2790016_2790235_-	ogr/Delta-like zinc finger family protein	Q53ZE7	Salmonella_virus	2.1e-38	100.0
WP_023138912.1\|2790303_2791404_-	phage late control D family protein	A0A1S6KZZ5	Salmonella_phage	2.4e-194	98.6
WP_023138914.1\|2791883_2794691_-\|tail	phage tail tape measure protein	E5G6Q1	Salmonella_phage	0.0e+00	99.0
WP_000763316.1\|2794683_2794803_-\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	1.8e-15	100.0
WP_001280967.1\|2794817_2795120_-\|tail	phage tail assembly protein	A0A1S6KZZ9	Salmonella_phage	9.4e-45	99.0
WP_001207653.1\|2795174_2795690_-\|tail	phage major tail tube protein	E5G6P8	Salmonella_phage	2.7e-92	99.4
WP_023138915.1\|2795699_2796872_-\|tail	phage tail sheath protein	A0A1S6KZY7	Salmonella_phage	1.3e-222	99.5
WP_001165558.1\|2796974_2797532_-	serine-type DNA invertase Fin	A0A1S6L009	Salmonella_phage	5.5e-99	98.4
WP_077908642.1\|2798519_2799137_+\|tail	tail fiber assembly protein	A0A1S6KZY8	Salmonella_phage	1.4e-111	98.5
WP_023138916.1\|2799140_2799680_-\|tail	tail fiber assembly protein	A0A1S6KZZ1	Salmonella_phage	6.1e-95	97.2
WP_064507161.1\|2799682_2800534_-	hypothetical protein	A0A1S6KZZ8	Salmonella_phage	6.3e-163	98.9
WP_023138919.1\|2801334_2801940_-\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	5.8e-118	99.0
WP_023138920.1\|2801932_2802841_-\|plate	baseplate assembly protein	A0A1S6KZY6	Salmonella_phage	2.2e-158	99.3
WP_000177408.1\|2802827_2803187_-	GPW/gp25 family protein	A0A1S6KZZ4	Salmonella_phage	6.8e-58	96.6
WP_001672413.1\|2803183_2803762_-\|plate	phage baseplate assembly protein V	E5G6N6	Salmonella_phage	1.4e-108	100.0
WP_024148874.1\|2803835_2804480_-	hypothetical protein	NA	NA	NA	NA
WP_023138922.1\|2804481_2805573_-	DUF262 domain-containing protein	A0A0R6PKN1	Moraxella_phage	1.4e-18	31.2
WP_023138923.1\|2805591_2806038_-	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	1.5e-59	80.4
WP_001039961.1\|2806030_2806462_-\|tail	phage tail protein	A0A1S6KZY0	Salmonella_phage	1.1e-75	99.3
WP_024133383.1\|2806557_2806986_-	hypothetical protein	A0A1S6KZX8	Salmonella_phage	1.5e-67	98.6
WP_000731036.1\|2806982_2807360_-	hypothetical protein	A0A1S6KZZ2	Salmonella_phage	8.1e-62	100.0
WP_001069919.1\|2807364_2807874_-	lysozyme	A0A1S6KZY9	Salmonella_phage	2.2e-94	98.8
WP_023138924.1\|2807854_2808070_-\|holin	holin family protein	E5G6N0	Salmonella_phage	1.3e-32	98.6
WP_023138925.1\|2808073_2808277_-\|tail	tail protein X	E5G6M9	Salmonella_phage	2.5e-33	98.5
WP_000673535.1\|2808276_2808741_-\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	4.2e-84	98.1
WP_000059172.1\|2808834_2809485_-\|terminase	terminase endonuclease subunit	A0A1S6KZX1	Salmonella_phage	2.2e-115	100.0
WP_023138927.1\|2809488_2810553_-\|capsid	phage major capsid protein, P2 family	A0A1S6KZZ3	Salmonella_phage	2.7e-195	99.4
WP_023138928.1\|2810569_2811403_-\|capsid	GPO family capsid scaffolding protein	E5G6M5	Salmonella_phage	6.9e-130	99.6
WP_023138929.1\|2811545_2813312_+\|terminase	terminase ATPase subunit family protein	A0A1S6KZW3	Salmonella_phage	0.0e+00	99.8
WP_023138930.1\|2813311_2814346_+\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	5.5e-177	91.0
WP_023138931.1\|2814415_2815081_-	hypothetical protein	NA	NA	NA	NA
WP_024138933.1\|2815080_2815515_-	hypothetical protein	NA	NA	NA	NA
WP_001655629.1\|2815527_2816634_-	hypothetical protein	NA	NA	NA	NA
WP_000700647.1\|2816985_2817663_-	hypothetical protein	NA	NA	NA	NA
WP_001217575.1\|2817776_2818010_-	DinI family protein	E5G6M1	Salmonella_phage	4.7e-36	100.0
WP_023138932.1\|2818020_2818209_-	hypothetical protein	E5G6M0	Salmonella_phage	4.6e-26	95.2
WP_023138933.1\|2818362_2820792_-	replication endonuclease	A0A1S6L028	Salmonella_phage	0.0e+00	91.8
WP_023138934.1\|2820782_2821643_-	DNA adenine methylase	E5G6L8	Salmonella_phage	3.4e-132	81.1
WP_001090717.1\|2821639_2822224_-	3'-5' exonuclease	A0A1S6L012	Salmonella_phage	1.1e-76	73.7
WP_000785510.1\|2822220_2822448_-	TraR/DksA family transcriptional regulator	A0A1S6L007	Salmonella_phage	1.0e-35	94.7
WP_023138935.1\|2822447_2822681_-	DUF2732 domain-containing protein	A0A1S6L021	Salmonella_phage	3.7e-25	83.1
WP_000963479.1\|2822748_2823090_-	DUF5347 domain-containing protein	A0A1S6L019	Salmonella_phage	4.6e-56	99.1
WP_023138936.1\|2823053_2823254_-	DUF2724 domain-containing protein	A0A1S6L005	Salmonella_phage	1.6e-32	98.5
WP_000460858.1\|2823261_2823771_-	phage regulatory CII family protein	A0A1S6L008	Salmonella_phage	1.6e-89	100.0
WP_000102102.1\|2823803_2824046_-	Rha family transcriptional regulator	A0A1S6KZZ6	Salmonella_phage	1.1e-38	100.0
WP_000616878.1\|2824165_2824798_+	phage repressor protein CI	A0A1S6KZZ7	Salmonella_phage	1.1e-116	100.0
WP_001536726.1\|2824801_2825827_+\|integrase	site-specific integrase	A0A1S6L016	Salmonella_phage	9.9e-203	100.0
WP_023242842.1\|2826154_2827384_+\|integrase	tyrosine-type recombinase/integrase	A0A1B5FPC6	Escherichia_phage	1.0e-214	89.2
WP_023242843.1\|2827731_2829144_-	hypothetical protein	NA	NA	NA	NA
WP_149028553.1\|2829218_2829938_-	N-6 DNA methylase	NA	NA	NA	NA
WP_046735906.1\|2829921_2830341_-	methyltransferase	NA	NA	NA	NA
WP_024156456.1\|2830418_2832119_+	zinc ribbon domain-containing protein	NA	NA	NA	NA
WP_023242845.1\|2832130_2832973_+	hypothetical protein	NA	NA	NA	NA
WP_023242846.1\|2833045_2833510_+	hypothetical protein	NA	NA	NA	NA
WP_129369178.1\|2833522_2833723_-	hypothetical protein	NA	NA	NA	NA
WP_093976750.1\|2834132_2835243_+\|transposase	IS3 family transposase	A0A2I6AZV9	Macacine_betaherpesvirus	8.4e-06	25.0
WP_086016394.1\|2835223_2836314_-\|transposase	IS3 family transposase	Q716C2	Shigella_phage	6.7e-141	87.7
WP_017442260.1\|2836745_2836973_+	hypothetical protein	NA	NA	NA	NA
WP_017442261.1\|2837003_2837963_+	RNA-directed DNA polymerase	NA	NA	NA	NA
WP_093976750.1\|2838646_2839757_+\|transposase	IS3 family transposase	A0A2I6AZV9	Macacine_betaherpesvirus	8.4e-06	25.0
2840152:2840169	attR	NA	NA	NA	NA

DBSCAN-SWA_4

4311658 : 4356133

Burkholderia_phage(38.1%)

holin,tail,tRNA,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_017441266.1\|4311658_4313317_-\|tail	phage tail protein	A0A0M3ULF6	Salmonella_phage	8.0e-53	52.7
WP_000359502.1\|4313319_4313952_-\|tail	phage tail protein I	Q6QI98	Burkholderia_phage	1.1e-23	56.4
WP_046735917.1\|4313944_4315060_-\|plate	baseplate J/gp47 family protein	Q6QI99	Burkholderia_phage	2.4e-101	52.7
WP_001093501.1\|4315050_4315410_-	GPW/gp25 family protein	Q6QIA0	Burkholderia_phage	2.8e-35	64.2
WP_017441264.1\|4315573_4317121_-	hypothetical protein	B9UDL6	Salmonella_phage	5.0e-49	30.4
WP_000703634.1\|4317120_4318050_-	glycosyltransferase family 2 protein	S5FKN0	Shigella_phage	6.7e-150	83.8
WP_000593184.1\|4318046_4318409_-	GtrA family protein	U5P0S6	Shigella_phage	9.6e-44	70.8
WP_000679395.1\|4318735_4319458_-\|plate	phage baseplate assembly protein V	A0A067ZIM2	Vibrio_phage	3.9e-12	42.0
WP_017441263.1\|4319467_4320511_-	phage late control D family protein	A4JWL3	Burkholderia_virus	1.5e-76	45.6
WP_001269716.1\|4320498_4320708_-\|tail	tail protein X	A4JWL2	Burkholderia_virus	9.8e-17	60.3
WP_017441262.1\|4320707_4321661_-\|tail	phage tail protein	A4JWL1	Burkholderia_virus	7.9e-37	51.5
WP_017441261.1\|4321660_4324015_-\|tail	phage tail tape measure protein	A4JWL0	Burkholderia_virus	3.4e-65	30.5
WP_001185654.1\|4324111_4324240_-\|tail	GpE family phage tail protein	NA	NA	NA	NA
WP_001003641.1\|4324199_4324517_-\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_017441260.1\|4324568_4325093_-\|tail	phage major tail tube protein	Q6QIA9	Burkholderia_phage	1.8e-67	69.0
WP_017441259.1\|4325092_4326520_-\|tail	phage tail sheath family protein	A4JWK5	Burkholderia_virus	1.8e-194	71.2
WP_000875313.1\|4326509_4326707_-	hypothetical protein	Q6QIB1	Burkholderia_phage	5.1e-07	52.9
WP_017441258.1\|4326703_4327159_-	Gp37 family protein	NA	NA	NA	NA
WP_000777266.1\|4327318_4327633_-	membrane protein	Q6QIC4	Burkholderia_phage	6.4e-20	49.1
WP_017441257.1\|4327645_4328251_-	lytic transglycosylase domain-containing protein	Q5ZQZ1	Pseudomonas_phage	1.0e-58	58.8
WP_001226440.1\|4328253_4328541_-\|holin	putative holin	Q6QIC8	Burkholderia_phage	5.1e-16	48.1
WP_001651225.1\|4329117_4329465_+	hypothetical protein	Q6QIE8	Burkholderia_phage	7.5e-22	52.6
WP_000136392.1\|4329599_4330949_-	lysine-sensitive aspartokinase 3	NA	NA	NA	NA
WP_000790025.1\|4331337_4332987_+	glucose-6-phosphate isomerase	NA	NA	NA	NA
WP_001541297.1\|4333430_4333673_+	outer membrane protein	NA	NA	NA	NA
WP_122821798.1\|4333706_4334375_+	YjbF family lipoprotein	NA	NA	NA	NA
WP_017441256.1\|4334371_4335109_+	capsule biosynthesis GfcC family protein	NA	NA	NA	NA
WP_031612648.1\|4335124_4337206_+	YjbH domain-containing protein	NA	NA	NA	NA
WP_000982752.1\|4337348_4337759_+	phosphate-starvation-inducible protein PsiE	NA	NA	NA	NA
WP_001252081.1\|4337924_4338815_-	maltose ABC transporter permease MalG	NA	NA	NA	NA
WP_046735918.1\|4338829_4340374_-	maltose ABC transporter permease MalF	NA	NA	NA	NA
WP_046735919.1\|4340505_4341696_-	maltose/maltodextrin ABC transporter substrate-binding protein MalE	NA	NA	NA	NA
WP_000179176.1\|4342057_4343167_+	maltose/maltodextrin ABC transporter ATP-binding protein MalK	Q6GZ03	Mycoplasma_phage	6.2e-17	47.2
WP_001594897.1\|4343255_4344611_+	maltoporin	NA	NA	NA	NA
WP_000782497.1\|4344774_4345692_+	maltose operon protein MalM	NA	NA	NA	NA
WP_017441255.1\|4345872_4346370_+	chorismate lyase	NA	NA	NA	NA
WP_000455249.1\|4346383_4347256_+	4-hydroxybenzoate octaprenyltransferase	NA	NA	NA	NA
WP_000017360.1\|4347354_4349775_-	glycerol-3-phosphate 1-O-acyltransferase PlsB	NA	NA	NA	NA
WP_000002902.1\|4349945_4350314_+	diacylglycerol kinase	NA	NA	NA	NA
WP_000646079.1\|4350422_4351031_+	repressor LexA	Q9G0C2	Lactococcus_phage	1.0e-13	38.0
WP_001128113.1\|4351209_4352535_+	MATE family efflux transporter DinF	NA	NA	NA	NA
WP_010989093.1\|4352531_4352645_+	hypothetical protein	NA	NA	NA	NA
WP_001030592.1\|4352666_4352876_+	CsbD family protein	NA	NA	NA	NA
WP_017441254.1\|4352974_4353490_-	zinc uptake transcriptional repressor Zur	NA	NA	NA	NA
WP_001039335.1\|4353736_4355047_+	conjugal transfer protein TraF	NA	NA	NA	NA
WP_001825318.1\|4355134_4356133_+\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP011365

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection