CRISPRimmunity

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP009922	Streptomyces xiamenensis strain MCCC 1A01550 chromosome, complete genome	3 crisprs	csa3,WYL,cas4,DEDDh,cas3,Cas14u_CAS-V,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	0	19	1	0

1. NZ_CP009922

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP009922_1

• CRISPR_ID: NZ_CP009922_1
• CRISPR_location: 2619722-2619818
• CRISPR_type: Unclear
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP009922_1

Consensus_repeat	Method
CGGGATCTGCATCGTCTCGCTGTTG	CRISPRCasFinder

spacers of NZ_CP009922_1

>1.1|2619747|47|NZ_CP009922|CRISPRCasFinder
CTGTCGGCCCCGTCCGTGCCCGAGGGCCGGTCGGTGCCCTCGACCTG

CRISPR arrays and Neighbor proteins around NZ_CP009922_1

CRISPR arrays

The CRISPR arrays of NZ_CP009922_1

>merge|NZ_CP009922|1|2619722-2619818|CRISPRCasFinder
CGGGATCTGCATCGTCTCGCTGTTGCTGTCGGCCCCGTCCGTGCCCGAGGGCCGGTCGGTGCCCTCGACCTGCGGGATCTGCACCGTCTCGCTGTTG

>NZ_CP009922|1|1|2619722-2619818|CRISPRCasFinder
CGGGATCTGCATCGTCTCGCTGTTG	CTGTCGGCCCCGTCCGTGCCCGAGGGCCGGTCGGTGCCCTCGACCTG
CGGGATCTGCACCGTCTCGCTGTTG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009922.3|WP_046723923.1|2627150_2628692_-|methyltransferase	unknown	unknown	gnl|CDD|237872
NZ_CP009922.3|WP_046723907.1|2607397_2608723_-|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl|CDD|187586
NZ_CP009922.3|WP_030735375.1|2630315_2630804_+|methylated-DNA--[protein]-cysteine-S-methyltransferase	unknown	unknown	gnl|CDD|223427
NZ_CP009922.3|WP_046723927.1|2631039_2633388_-|sodium-translocating-pyrophosphatase	unknown	unknown	gnl|CDD|234827
NZ_CP009922.3|WP_046723919.1|2618359_2619406_+|hypothetical-protein	unknown	unknown	gnl|CDD|280597
NZ_CP009922.3|WP_046723921.1|2622576_2625486_-|type-I-DNA-topoisomerase	unknown	unknown	gnl|CDD|236048
NZ_CP009922.3|WP_078847086.1|2626230_2626683_+|DUF2752-domain-containing-protein	unknown	unknown	gnl|CDD|378499
NZ_CP009922.3|WP_078635696.1|2629407_2629959_-|HAD-IA-family-hydrolase	unknown	unknown	gnl|CDD|319790
NZ_CP009922.3|WP_046723915.1|2611626_2614056_+|silent-information-regulator-protein-Sir2	unknown	unknown	gnl|CDD|238517
NZ_CP009922.3|WP_078846895.1|2606809_2607331_+|hypothetical-protein	unknown	unknown	gnl|CDD|340413
NZ_CP009922.3|WP_030735343.1|2616970_2618173_-|DNA-polymerase-III-subunit-delta'	unknown	unknown	gnl|CDD|236134
NZ_CP009922.3|WP_046723909.1|2608806_2609583_-|IclR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|224332
NZ_CP009922.3|WP_030735354.1|2625754_2626234_+|TM2-domain-containing-protein	unknown	unknown	gnl|CDD|377473
NZ_CP009922.3|WP_046723917.1|2614202_2614769_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP009922.3|WP_030735380.1|2633583_2634003_-|ATP-binding-protein	unknown	unknown	gnl|CDD|379279
NZ_CP009922.3|WP_030735340.1|2615298_2616915_-|alpha/beta-hydrolase	unknown	unknown	gnl|CDD|312032
NZ_CP009922.3|WP_078847085.1|2610543_2611572_+|L-idonate-5-dehydrogenase	unknown	unknown	gnl|CDD|176194
NZ_CP009922.3|WP_030735359.1|2626805_2627063_+|TM2-domain-containing-protein	unknown	unknown	gnl|CDD|377473
NZ_CP009922.3|WP_046723911.1|2609738_2610512_+|SDR-family-oxidoreductase	unknown	unknown	gnl|CDD|187605
NZ_CP009922.3|WP_026047464.1|2634098_2634440_-|STAS-domain-containing-protein	unknown	unknown	gnl|CDD|132914

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP009922.3|WP_046723923.1|2627150_2628692_-|methyltransferase	gnl|CDD|237872	PRK14968, PRK14968, putative methyltransferase; Provisional.	1.26063e-21
NZ_CP009922.3|WP_046723907.1|2607397_2608723_-|SDR-family-NAD(P)-dependent-oxidoreductase	gnl|CDD|187586	cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs. Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	6.57304e-13
NZ_CP009922.3|WP_030735375.1|2630315_2630804_+|methylated-DNA--[protein]-cysteine-S-methyltransferase	gnl|CDD|223427	COG0350, Ada, Methylated DNA-protein cysteine methyltransferase [DNA replication, recombination, and repair].	1.49515e-49
NZ_CP009922.3|WP_046723927.1|2631039_2633388_-|sodium-translocating-pyrophosphatase	gnl|CDD|234827	PRK00733, hppA, membrane-bound proton-translocating pyrophosphatase; Validated.	0
NZ_CP009922.3|WP_046723919.1|2618359_2619406_+|hypothetical-protein	gnl|CDD|280597	pfam02459, Adeno_terminal, Adenoviral DNA terminal protein. This protein is covalently attached to the terminii of replicating DNA in vivo.	0.0014977
NZ_CP009922.3|WP_046723921.1|2622576_2625486_-|type-I-DNA-topoisomerase	gnl|CDD|236048	PRK07561, PRK07561, DNA topoisomerase I subunit omega; Validated.	0
NZ_CP009922.3|WP_078847086.1|2626230_2626683_+|DUF2752-domain-containing-protein	gnl|CDD|378499	pfam10825, DUF2752, Protein of unknown function (DUF2752). This family is conserved in bacteria. Many members are annotated as being putative membrane proteins.	1.8612e-13
NZ_CP009922.3|WP_078635696.1|2629407_2629959_-|HAD-IA-family-hydrolase	gnl|CDD|319790	cd02603, HAD_sEH-N_like, N-terminal lipase phosphatase domain of human soluble epoxide hydrolase, Escherichia coli YihX/HAD4 alpha-D-glucose 1-phosphate phosphatase, and related domains, may be inactive. This family includes the N-terminal phosphatase domain of human soluble epoxide hydrolase (sEH). sEH is a bifunctional enzyme with two distinct enzyme activities, the C-terminal domain has epoxide hydrolysis activity and the N-terminal domain (Ntermphos), which belongs to this family, has lipid phosphatase activity. The latter prefers mono-phosphate esters, and lysophosphatidic acids (LPAs) are the best natural substrates found to date. In addition this family includes Gallus gallus sEH and Xenopus sEH which appears to lack phosphatase activity, and Escherichia coli YihX/HAD4 which selectively hydrolyzes alpha-Glucose-1-P, phosphatase, has significant phosphatase activity against pyridoxal phosphate, and has low beta phosphoglucomutase activity. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	1.99585e-25
NZ_CP009922.3|WP_046723915.1|2611626_2614056_+|silent-information-regulator-protein-Sir2	gnl|CDD|238517	cd01083, GAG_Lyase, Glycosaminoglycan (GAG) polysaccharide lyase family. This family consists of a group of secreted bacterial lyase enzymes capable of acting on glycosaminoglycans, such as hyaluronan and chondroitin, in the extracellular matrix of host tissues, contributing to the invasive capacity of the pathogen. These are broad-specificity glycosaminoglycan lyases which recognize uronyl residues in polysaccharides and cleave their glycosidic bonds via a beta-elimination reaction to form a double bond between C-4 and C-5 of the non-reducing terminal uronyl residues of released products. Substrates include chondroitin, chondroitin 4-sulfate, chondroitin 6-sulfate, and hyaluronic acid. Family members include chondroitin AC lyase, chondroitin abc lyase, xanthan lyase, and hyalurate lyase.	1.38493e-120
NZ_CP009922.3|WP_078846895.1|2606809_2607331_+|hypothetical-protein	gnl|CDD|340413	cd16936, HATPase_RsbW-like, Histidine kinase-like ATPase domain of RsbW, an anti sigma-B factor and serine-protein kinase involved in regulating sigma-B during stress in Bacilli, and related domains. This family includes histidine kinase-like ATPase (HATPase) domain of RsbW, an anti sigma-B factor as well as a serine-protein kinase involved in regulating sigma-B during stress in Bacilli. The alternative sigma factor sigma-B is an important regulator of the general stress response of Bacillus cereus and B. subtilis. RsbW is an anti-sigma factor while RsbV is an anti-sigma factor antagonist (anti-anti-sigma factor). RsbW can also act as a kinase on RsbV. In a partner-switching mechanism, RsbW, RsbV, and sigma-B participate as follows: in non-stressed cells, sigma-B is present in an inactive form complexed with RsbW; in this form, sigma-B is unable to bind to RNA polymerase. Under stress, RsbV binds to RsbW, forming an RsbV-RsbW complex, and sigma-B is released to bind to RNA polymerase. RsbW may then act as a kinase on RsbV, phosphorylating a serine residue; RsbW is then released to bind to sigma-B, hence blocking its ability to bind RNA polymerase. A phosphatase then dephosphorylates RsbV so that it can again form a complex with RsbW, leading to the release of sigma-B.	4.2329e-15
NZ_CP009922.3|WP_030735343.1|2616970_2618173_-|DNA-polymerase-III-subunit-delta'	gnl|CDD|236134	PRK07940, PRK07940, DNA polymerase III subunit delta'; Validated.	0
NZ_CP009922.3|WP_046723909.1|2608806_2609583_-|IclR-family-transcriptional-regulator	gnl|CDD|224332	COG1414, IclR, Transcriptional regulator [Transcription].	1.505e-70
NZ_CP009922.3|WP_030735380.1|2633583_2634003_-|ATP-binding-protein	gnl|CDD|379279	pfam13581, HATPase_c_2, Histidine kinase-like ATPase domain.	3.83572e-30
NZ_CP009922.3|WP_078847085.1|2610543_2611572_+|L-idonate-5-dehydrogenase	gnl|CDD|176194	cd08232, idonate-5-DH, L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	3.96375e-155
NZ_CP009922.3|WP_030735340.1|2615298_2616915_-|alpha/beta-hydrolase	gnl|CDD|312032	pfam08386, Abhydrolase_4, TAP-like protein. This is a family of putative bacterial peptidases and hydrolases that bear similarity to a tripeptidyl aminopeptidase isolated from Streptomyces lividans. A member of this family is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterized from Propionibacterium freudenreichii.	4.07508e-27
NZ_CP009922.3|WP_030735354.1|2625754_2626234_+|TM2-domain-containing-protein	gnl|CDD|377473	pfam05154, TM2, TM2 domain. This family is composed of a pair of transmembrane alpha helices connected by a short linker. The function of this domain is unknown, however it occurs in a wide range or protein contexts.	3.1256e-18
NZ_CP009922.3|WP_030735359.1|2626805_2627063_+|TM2-domain-containing-protein	gnl|CDD|377473	pfam05154, TM2, TM2 domain. This family is composed of a pair of transmembrane alpha helices connected by a short linker. The function of this domain is unknown, however it occurs in a wide range or protein contexts.	3.63567e-17
NZ_CP009922.3|WP_046723911.1|2609738_2610512_+|SDR-family-oxidoreductase	gnl|CDD|187605	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs. Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	6.95128e-118
NZ_CP009922.3|WP_026047464.1|2634098_2634440_-|STAS-domain-containing-protein	gnl|CDD|132914	cd07043, STAS_anti-anti-sigma_factors, Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation. Anti-anti-sigma factors play an important role in the regulation of several sigma factors and their corresponding anti-sigma factors. Upon dephosphorylation they bind the anti-sigma factor and induce the release of the sigma factor from the anti-sigma factor. In a feedback mechanism the anti-anti-sigma factor can be inactivated via phosphorylation by the anti-sigma factor. Well studied examples from Bacillus subtilis are SpoIIAA (regulating sigmaF and sigmaC which play an important role in sporulation) and RsbV (regulating sigmaB involved in the general stress response). The STAS domain is also found in the C- terminal region of sulphate transporters and stressosomes.	4.30511e-34

Protein sequences

>NZ_CP009922.3|WP_046723919.1|2618359_2619406_+|hypothetical-protein
MSPRKALPAVTLAAVLAVALPGSAQAADPTGFAATGFTATLGSSIQITEARAAYPTGPVRADVSSARFSSLGTVAGIYAVTGEHRTGGTAAEAGVASTELDLTAATLSTGSVSARCVTEPDSAPTARVRVNDAVVAVPESARVNVTGNPQPNTTFQLPGGLGRIVLNEQVTGADGSLTVNALRLTLGEGAGLLAGDVVIGSVTCPSLVPPPEEEEEEIEEAEEPAEEEAVVEEGVLISVAEDADAGHGVKDVVFDVVDERGALIDTCTTDASGRCGVAFVPGERTYYACVSQTPAGYAMPAPDEVCDGPYRVAPGAEVTIHEPFPLLRAETGTEAGDGAETLPAPAER
>NZ_CP009922.3|WP_030735343.1|2616970_2618173_-|DNA-polymerase-III-subunit-delta'
MTVWDELVGQDRVAAQLTAAARDADAYVTAIDAGQEPRLAGSSMTHAWLFTGPPGSGRATAARAFAAALQCLSPDRALGGAPGCGFCDGCHTSLIGTHADVEVIRTDLLTIGVKETRELVRRAQLSPAGGRWQVIVMEDADRLTEGAGNVLLKAVEEPAPRTVWLLCAPSTEDVLPTIRSRCRTLSLRTPPVAAVADVLMRRDGVDPEVAQAAARATQGHIDRARRLATDERARARRAAVLRIPERVTDIGGALRAAQELVDAAAEDAKQLAEERDDKETEELRAALGAAEGKRLPRGTAGVMKDLEDRQKRRATRTQRDALDLALTELTGFYRDVLARQLGSAVALAGGESAAAVERVAAASAPERTLRRMEAILECRTALDRNVSPLLAVEAMAVALR
>NZ_CP009922.3|WP_030735340.1|2615298_2616915_-|alpha/beta-hydrolase
MTRKTRYLPLLTVGALLLASACSSEERAEERPSPTQSSGEETATGGSESSEGGSAIDAPALDPLPEEISADLQPYYEQELTWRGCTGVPGFQCAMLTVPLDYTSVDPADDIQLTVTRARAGGADRLGALLMNPGGPGASAVDFAQSSASYIFPAEVRERYDMVGLDARGTGGSEPIECLTGPEMDASTQVDRTPDDAEEQQALLTAHEEFAAGCQANSGRLLEHISTIESARDMDVLRAVLGDERLHYVGFSYGTKLGAVYAGLFPQRVGHLVLDAAVDPRLSTLDLDREQAGGFETAFRSFAEHCAARNSCPLGSEGGDDASQRLSAFFAELDEKPLATGQDRPLTESLATTGVAMALYSESLWSQLRQALSAAMNEGDGSPLLELADTYNEREADGSYGTTMFAFPAISCLDSPAATTTPEEVLAQLPAYEEASPTFGRDFAWATLLCGVWPVEPSGSPVTIAAAGADPILVIGTTRDPATPYAWSEGLAEQLESGILLTNDGDGHTAYGDNACIDAMVNDYLLENVSPEEGASCP
>NZ_CP009922.3|WP_046723917.1|2614202_2614769_+|hypothetical-protein
MALVVLLAVVGDAFALLTWVGPRQLYWAFGAWAHRDPQANEPSDAAYTVQRFGYIALSATSFVGALSTAHWQGTFTSEEARVRQAVEKAAERMEEADVTSGGSANSATGRYNSQVQSAVRQASPHDLELVATHVSGEQYTVTTAAGEHPFCLVVRASSQDVYVPGAEGSTSTTSYLKLSVSAREGACG
>NZ_CP009922.3|WP_046723915.1|2611626_2614056_+|silent-information-regulator-protein-Sir2
MDFSRRALLTTLPASALLSVAAPARSPAAAPGVDDHARILSNALAILTGTPESNAHPEVAARLADIASTAQRHLTAMDRATPGELFPNLPLGTSDPNLHTTYRYLYEIALATPSPATQRRVIDALAQLHDTYYGDQSRGYYGNWFTWEIGISTHVTRALVLLRDELATHQPTLTATYLASMDAYLRNGKDGDVDLDSRFHTGANLADITTNRILQGALTGDGARVTKAVADQLTVYATVEEGDGFHADGSFIQHESVAYTGAYGKNLLTRAVQTLKLLHGTGFAPATPLAPVIQGWITHSFAPVIFEGWLMEIVKGRTVSRPQTGYADVSTIVEAVTDLSSHTSDQDAHVLKSYAKSIAQVSPSPPDPQDFVSPLTIAAYADILADPTIPAQDLVPREHHAAFNAMDRTVHRRPGYAFALARSSRRISKYEYMNGENLTPWFQGDGAHYLYLTGQDQTQTFGIDHFTTVSPYHLAGVTAPVEPRRTIPDLYGAPWYDNPEAGFTASSTRQNQYVYFPLATNTHSGGAHLGPYGTASLVLGDDAAHAARHELPPDFVTYANARATKSWFMFDDEIVILTADVHDPAGRPLTTTLDTRITAPSTPLTLTEGPNWLHCTGPDFSLGYVFLTNTTPTARLTTVTNSRRLIRTANPDTPITKQIFTLLQEHPPTPHPHSLAYALLPNATRAQLASYGDSPLTILSNTPHLQAVEHRNLSLLMANTFTPGPHHTGPLTIEGPASVLLHTTPDGTLSIAIADPTTKRDTVTVLLRGYRLDVISADEGVHVRRLSIGTRLTADTRSMNGRSVTATLH
>NZ_CP009922.3|WP_078847085.1|2610543_2611572_+|L-idonate-5-dehydrogenase
MRACTVHGAGDLRIEERPTPAPAPGEIAVAIALGGICGSDLHYYHRGRVGDFAVREPMVLGHEVVGHVAALGPETEGPAVGTAVAIHPATPCGSCPECAADRRNICGHTRYLGSAAHLPHVQGGFAQRVTVPAAQIRALHPGLTLHRAVLAEPLSVALHAVNRAGDVRGKRVLVTGAGPIGCLVVAALRHHGAAEIVASDLVDEPLRIAAEVGATATVRADHPEDPAWAAPFDITIEASGAPAGLRTCVERTRRGGTVVLLGLLPPGEVGLLGNVAVTRELELRGAFRFDTEFDEALSLLAQGLPVDPVITHTFPLDRATEAFDLAGNRELASKVLLDLSTT
>NZ_CP009922.3|WP_046723911.1|2609738_2610512_+|SDR-family-oxidoreductase
MSHPLFDVTGKVALVTGSSRGIGRALAQGLLEAGCTVVLNGRDAATLETTRAELAATFGDTTVLAEAFDVTDSTGVAAAVGRIEERAGAIDILVNNTGAQRRAPFTEFTDEDWHGLLDTNLTSAFLVGREVARRMVPRGHGKIINICSLQSEAVRPGIAPYSATKGGLKMLTKGMCADLGPSGIQVNGIGPGYFDTELTSALVADEEFSAWVRKRTPAGRWGQTGDLVGALIFLASPASDFVNGQLLYVDGGMLSVL
>NZ_CP009922.3|WP_046723909.1|2608806_2609583_-|IclR-family-transcriptional-regulator
MSTSESSAVPADVVGRAIRLLVLVGEHPHGITLSELSRASGVPVSTAHRLVNSLAREGLVDFEASGKRYKPGLRLFQLGQQAGQAYGFAGTALPVMRRVTERTEEATLMSVLDGNRHLYVHYVDGPLPVGVRSEPGRHGPLHCTSMGKVLMAFAPEEVREDLLERVELTPYGPHSITDRDVLRAEVARAAAQGYATADEEHHAGLRAVAVPILRPDGSLFACLSTAAPAFRRSLDDLVALVPVLREAATELGVRLPAR
>NZ_CP009922.3|WP_046723907.1|2607397_2608723_-|SDR-family-NAD(P)-dependent-oxidoreductase
MGMGEDELAAFGATVARLRALPADDPVRLRAEQMVAPLTREARRRRGRARRAEAREADALVQGRTATGDAGRIEDAPLTVGEETPGCYVRPRRCYVCKEPYREVHRFYHALCPGCAADHAARREAGTDLRGRRALITGGRVKIGFQLALMMLRDGAELMVTSRFPADTLRRFRDVPGSGEWFGRLTVIGIDLRDPRQVAGLCDGLVREGRPLDVLVNNAAQTIRRPPGAYAVLSAGERAAAELPPAGRTLAAPGFPGTVAAELPPGVLAEVDQAGLLPDHSPVNSWSVRLGELDGAEILETHLINAIAPLLLCDRLLPLLLASPRPRRYIVNVSAVEGRFAVRNKAPRHPHTNMAKAALNMLTRTSGPELAKRGVYMSAVDTGWITDENPAPRKASMAAAGFRTPLDVVDGAARVYDPVVRGEAGDPVAGVFLKDYREAAW
>NZ_CP009922.3|WP_078846895.1|2606809_2607331_+|hypothetical-protein
MSPEPQQPTVPTQNATCAGIPRLAPIPFAEPWRYELHFPRDPRAPRIARLTLRTVLHAHGLTELTDRAELLTSELACNAVCHTGGAASVQLHWRHPVLRVSVWDTSPALPDTPGTPRPAPPPDSHNGRGLLLLDALADHWGGCALEDGPWGPGGKTVWFELRLTPPGPAALAA
>NZ_CP009922.3|WP_046723921.1|2622576_2625486_-|type-I-DNA-topoisomerase
MSPTSETTNGGRRLVIVESPAKAKTIKGYLGPGYVVEASVGHIRDLPNGAAEVPAKYKGESWARLGVNVDAGFQPLYVVNSDKKDQVRKLKELLAESDELYLATDEDREGEAIAWHLREVLKPKVPVRRMVFHEITRDAIRAAVNNPRELNQLLVDAQETRRILDRLYGYEVSPVLWKKVMPRLSAGRVQSVATRLVVERERERIAFHPAAYWDLTGTFATDGGGADGGPDTFGARLVSVDGRRIAQGRDFGPDGQLKNPGQVRQLDEAAARELAQSLAGAAFSVRSVESKPYRRSPYAPFRTTTLQQEASRKLGMGAKATMQVAQRLYENGFITYMRTDSTTLSETAVAAARAQVTQLYGREYLPEKPRTYASKVKNAQEAHEAIRPSGDRFRTPAETGLTGEQFRLYELIWKRTVASQMKDAVGQSVAVRVAGTGAGGQDCEFGATGKIITFHGFMKAYVEGADDPNAELDDRERRLPQVAEGDPLAARELAADGHSTKPPARYTEASLVKELEEREIGRPSTYASIIGTILDRRYVFKKGTALVPSFLSFAVVNLLEQHFGRLVDYDFTAKMEDDLDRIATGDAEAVPWLRRFYFGEGGEGVGVAAEAGNGDGDHLGGLKELVTDLGAIDAREISSFPVGEGIVLRVGRYGPYVEAPPEEGAAEGEPGKRADVPDELPPDELTVELAKELLAKPSGDFELGTDPVSGHPIVGRDGRYGPYVTEVLPEGTPKTGKNAVKPRTASLFKTMRLDTITLDDALKLLSLPRVVGTDPESGDDITAQNGRYGPYLKKGTDSRSLESEEQLFTITLEQAQAIYAQPKKRGRAAAKPPLKELGTDPVTQAPVVVKDGRFGPYVTDGETNATLRRDDDPETITPERGFELLAEKRAKGPAKKTAKKTAAKKTTKKAAAKKTTTKKAAAKTTAAKKTAAKKTSAATKTAAKKTTAAKKTSAAKKATSKAENGPSEE
>NZ_CP009922.3|WP_030735354.1|2625754_2626234_+|TM2-domain-containing-protein
MTDQNPYQQPPPDPNQNPYQQPGQPGTPPPGGQPGQPGYGYPQQPTGPMPGAPGGGYGQYPPPGYGQQPGAAYGAVDPNAPFGYDQYGRPYSSKSKIIAGVLQLVLGGVGAGRWYTGHYGLAVAQLLTCGGMGIWSLIDGILFLVKDDRTDSDGRVLKS
>NZ_CP009922.3|WP_078847086.1|2626230_2626683_+|DUF2752-domain-containing-protein
MTGTGAGPGGEGRRVSSITRGRRRFHPAVLPLATLAAGLAGSVYLWHTNPHEGGGLLPRCPVNWATGLQCPACGGTRMAYDLLHGDVAAALHDNAVLLLLGVPLAAWVGGRWLYEGLRGRRYVPRLGGRAGMAAIVGIAVVWAVVRNVMG
>NZ_CP009922.3|WP_030735359.1|2626805_2627063_+|TM2-domain-containing-protein
MTYPPAPAPGVPAGAPESPKSKVVAGILQILLGGVGAGRWYTGHYGMAVAQLLTCGGLGIWALIDGILFLVKEDRTDSDGLVLKK
>NZ_CP009922.3|WP_046723923.1|2627150_2628692_-|methyltransferase
MSAPHNGRVSTADLPLPTAAGTARLRAALAADAFTADGLLDLLGAPAYAALARGETVPAARAIHGDDGAAAVLVRLFLLQRPVPYESARAVLPADELLGDGWLVREGPSVRATVDVRPYPGPDGEDWWVVSDPGFGVGGAGGAGGKERDVVLGVGGASMTLAQLTVRQPVGRVLDLGTGSGIQALHAAQHAERVVATDVNPRALRMAALTLALSGAAEPELRQGSLFEPVAREAGFDLIVANPPFVISPRRDDTDALTYRDGGMDGDELCRTLVEQSAARLNDGGWCQLLANWQHVEGEDWRERLASWVPAGCDAWIVQRERQDVTEYTELWLRDAGAHRGDPDAYERLYGEWLAEFERRRTRGVGFGWITLRKTGTDRPAITVEEWPHAVEQPLGETVRRHFALADFLREHDDQALLAARYTLADGVVQEQVGAPGAEDPEHVVLRQRHGMMRAHSVDTVGAALAGSCDGTLPAGVIVDAIAQLLEADPGQVRAGVPEVLRTLVGDGFLLPV
>NZ_CP009922.3|WP_078635696.1|2629407_2629959_-|HAD-IA-family-hydrolase
MRPVYELAFQPDRLLAAVTGAVTDEQWRAAVRELLPAGQRALADEWSAGAGRLDPEVAGMLREVRRKVPVVLVSNGTTRLEADLARLGAADVADGVVNSARIGIAKPQPGIYEIAARRAGVAPGRCLFVDDALENVQAARRTGMTGVHYQDAGQLREMLVPLMQMAAIRGDRTARHSEEGSTA
>NZ_CP009922.3|WP_030735375.1|2630315_2630804_+|methylated-DNA--[protein]-cysteine-S-methyltransferase
MTTTTVWTRTDSPVGELVLVGDPGGALSAIGLPESPKGFAVDPGWRRDDAVFADAVRQLAEYFAGRRTRFELTYLPLGSEFRRRVWAALEDIPYGTTTTYGAVAEAIGASRAAVRAVGGAIGANPLMLVRPCHRVIGADGSLTGYAGGIERKRLLLEREGAL
>NZ_CP009922.3|WP_046723927.1|2631039_2633388_-|sodium-translocating-pyrophosphatase
MAGIPYIHAAELTGGDRGLVVIIAVVAAAALGLAVVLARQVLAAGEGTAGMQKIAAAVQEGANAYLARQLRTVSVFAVVVFFLLFLLPADDWNQRIGRSLFFLIGALFSAATGYIGMWLAVRSNVRVAAAARAADERDAVPARHRAMRIAFRTGGVVGMCTVGLGLLGAACVVLVYAADAPKVLEGFGLGAALIAMFMRVGGGIFTKAADVGADLVGKVEQGIPEDDPRNAATIADNVGDNVGDCAGMAADLFESYAVTLVAALILGTVAFGDAGLAFPLLVPAIGVLTAMAGIFLVAPRRGDRSSMTAINRGFFLSAGISLVLVAVAAYAYLPASFAELSGIGDPEIAGHDADPRLFALAAVAIGIVLAALIQQLTGYFTEPSRRPVRDIGKTSRTGPATVVLAGFSLGLESAVYTALLVGLSVYAAFLLAGSTIMLALFAVALAGTGLLTTVGVIVAMDTFGPVADNAQGIAEMSGDVEGEGARVLTDLDAVGNTTKAVTKGIAIATAVLAAAALFGSYRDAIATAIGDVGVEKITDVTLLSLDISQPNNLVGLIIGAAVVFLFSGLAVNAVSRSAGSVVYEVRRQFRERPGIMDHSEQPEYGKVVDICTRDSLRELATPGLLAVLAPIAVGFSLGVGALGSYLAGSIAAGILMAVFLANSGGAWDNAKKLVEDGHHGGKGSEAHAATVIGDTVGDPFKDTAGPAINPLLKVMNLVALLIAPAVVTLSYGDDASGPLRALITAVALVIIVGAVYVSKRRGIAVEDDEEHEEVSAAPVPGR
>NZ_CP009922.3|WP_030735380.1|2633583_2634003_-|ATP-binding-protein
MATVELRFSASPEHVRTARLVAAAVARRAGVDESALDELRLAVGEACSRAVGLHTAHGLTSPVRVTLTEAEKSFTIEVGDDAPSVVQVPHGKPAAEAAEETDELGLAVISGLVDDVEVIADEHGGAIRMSWPTMDAAFS
>NZ_CP009922.3|WP_026047464.1|2634098_2634440_-|STAS-domain-containing-protein
MDLSLSTRTVGDRTVVEVGGEIDVYTAPKLREQLVELVNEGNHHLVVDMERVDFLDSTGLGVLVGGLKRVRAQEGSLRLVCNQERILKIFRITGLTKVFPIHESVEEAIAATD

Crispr_ID: NZ_CP009922_2

• CRISPR_ID: NZ_CP009922_2
• CRISPR_location: 4961964-4963213
• CRISPR_type: TypeI-E
• Repeat_type: NA
• Spacer_info: 20 spacers
• Cas_protein_info: cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2

Consensus repeat of NZ_CP009922_2

Consensus_repeat	Method
GGAACACCCCCGCAGGTGCGGGGACGAC	PILER-CR
GGAACACCCCCGCAGGTGCGGGGACGAC	CRISPRCasFinder
GGAACACCCCCGCAGGTGCGGGGACGAC	CRT

spacers of NZ_CP009922_2

>2.1|4961992|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT
GTGCAGACGCGCCGTGGTGGCCTGCACCTGTAC
>2.2|4962053|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT
TACCAGCTGCCGCTGGAGGTGATCTGCCACCTC
>2.3|4962114|34|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT
TCGGGTCCACCCGCTCCGCCTCGCGCCGCAGGGC
>2.4|4962176|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT
CCACCGGCGAGAGTCGGGTCACCGTGCCCGACC
>2.5|4962237|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT
CGACCACGGTTTGCAGCTCGTCACCGATACCGC
>2.6|4962298|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT
AGATGTGGTATGCCGTGATCACCAGCAGCGCTG
>2.7|4962359|34|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT
GCCGGAATAGGCGATAGCGATGCCACCACGGAAC
>2.8|4962421|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT
TTGCGGGCCGCACGCCAGTGCTCCGCGCGGGCC
>2.9|4962482|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT
GAGCGAGAGCCGATGGACGACGCGCTACGCACG
>2.10|4962543|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT
CGCGACAACAGCGGCAGCTGCAACGGGGCCGAC
>2.11|4962604|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT
TGCCCCCACAGGCCGGGGCCCATCTGGAAGCCG
>2.12|4962665|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT
CTGGACGCGCAGGTCGTGTACGAGAACGACCAC
>2.13|4962726|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT
CCAGCGGCGGGGGAGCGGTTCGGCGAGGAGCGA
>2.14|4962787|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT
GAGGCGGCGCACCGCCGCCAGGTGCTCGGAGAG
>2.15|4962848|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT
AACCACGTCTCGGCGCACGTCTTGTGGCAGGGC
>2.16|4962909|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT
TAAAGTTCGGTGCCTAGCCCCCATGGAGGTCCG
>2.17|4962970|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT
GACCTGTCACCCGGATCGGACGACCTCACCCTC
>2.18|4963031|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT
CCCGGTGCAGACGCGGAGCGTTATCGCGGCGTG
>2.19|4963092|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT
CGCTGTCCGCGACCGACCCCGGCTGGATATCCA
>2.20|4963153|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT
TTTGGGGTCGGACAGAGAGCGACGCGCACGACC

CRISPR arrays and Neighbor proteins around NZ_CP009922_2

CRISPR arrays

The CRISPR arrays of NZ_CP009922_2

>merge|NZ_CP009922|2|4961964-4963213|PILER-CR,CRISPRCasFinder,CRT
GGAACACCCCCGCAGGTGCGGGGACGACGTGCAGACGCGCCGTGGTGGCCTGCACCTGTACGGAACACCCCCGCAGGTGCGGGGACGACTACCAGCTGCCGCTGGAGGTGATCTGCCACCTCGGAACACCCCCGCAGGTGCGGGGACGACTCGGGTCCACCCGCTCCGCCTCGCGCCGCAGGGCGGAACACTCCCGCAGGTGCGGGGACGACCCACCGGCGAGAGTCGGGTCACCGTGCCCGACCGGAACACCCCCGCAGGTGCGGGGACGACCGACCACGGTTTGCAGCTCGTCACCGATACCGCGGAACACCCCCGCAGGTGCGGGGACGACAGATGTGGTATGCCGTGATCACCAGCAGCGCTGGGAACACCCCCGCAGGTGCGGGGACGACGCCGGAATAGGCGATAGCGATGCCACCACGGAACGGAACACCCCCGCAGGTGCGGGGACGACTTGCGGGCCGCACGCCAGTGCTCCGCGCGGGCCGGAACACCCCCGCAGGTGCGGGGACGACGAGCGAGAGCCGATGGACGACGCGCTACGCACGGGAACACTCCCGCAGGTGCGGGGACGACCGCGACAACAGCGGCAGCTGCAACGGGGCCGACGGAACACCCCCGCAGGTGCGGGGACGACTGCCCCCACAGGCCGGGGCCCATCTGGAAGCCGGGAACACCCCCGCAGGTGCGGGGACGACCTGGACGCGCAGGTCGTGTACGAGAACGACCACGGAACACCCCCGCAGGTGCGGGGACGACCCAGCGGCGGGGGAGCGGTTCGGCGAGGAGCGAGGAACACCCCCGCAGGTGCGGGGACGACGAGGCGGCGCACCGCCGCCAGGTGCTCGGAGAGGGAACACCCCCGCAGGTGCGGGGACGACAACCACGTCTCGGCGCACGTCTTGTGGCAGGGCGGAACACCCCCGCAGGTGCGGGGACGACTAAAGTTCGGTGCCTAGCCCCCATGGAGGTCCGGGAACACCCCCGCAGGTGCGGGGACGACGACCTGTCACCCGGATCGGACGACCTCACCCTCGGAACACCCCCGCAGGTGCGGGGACGACCCCGGTGCAGACGCGGAGCGTTATCGCGGCGTGGGAACACCCCCGCAGGTGCGGGGACGACCGCTGTCCGCGACCGACCCCGGCTGGATATCCAGGAACACCCCCGCAGGTGCGGGGACGACTTTGGGGTCGGACAGAGAGCGACGCGCACGACCGGAACACCCCCGCAGGTGCGGGGACGAC

>NZ_CP009922|2|1|4961964-4963213|PILER-CR
GGAACACCCCCGCAGGTGCGGGGACGAC	GTGCAGACGCGCCGTGGTGGCCTGCACCTGTAC
GGAACACCCCCGCAGGTGCGGGGACGAC	TACCAGCTGCCGCTGGAGGTGATCTGCCACCTC
GGAACACCCCCGCAGGTGCGGGGACGAC	TCGGGTCCACCCGCTCCGCCTCGCGCCGCAGGGC
GGAACACTCCCGCAGGTGCGGGGACGAC	CCACCGGCGAGAGTCGGGTCACCGTGCCCGACC
GGAACACCCCCGCAGGTGCGGGGACGAC	CGACCACGGTTTGCAGCTCGTCACCGATACCGC
GGAACACCCCCGCAGGTGCGGGGACGAC	AGATGTGGTATGCCGTGATCACCAGCAGCGCTG
GGAACACCCCCGCAGGTGCGGGGACGAC	GCCGGAATAGGCGATAGCGATGCCACCACGGAAC
GGAACACCCCCGCAGGTGCGGGGACGAC	TTGCGGGCCGCACGCCAGTGCTCCGCGCGGGCC
GGAACACCCCCGCAGGTGCGGGGACGAC	GAGCGAGAGCCGATGGACGACGCGCTACGCACG
GGAACACTCCCGCAGGTGCGGGGACGAC	CGCGACAACAGCGGCAGCTGCAACGGGGCCGAC
GGAACACCCCCGCAGGTGCGGGGACGAC	TGCCCCCACAGGCCGGGGCCCATCTGGAAGCCG
GGAACACCCCCGCAGGTGCGGGGACGAC	CTGGACGCGCAGGTCGTGTACGAGAACGACCAC
GGAACACCCCCGCAGGTGCGGGGACGAC	CCAGCGGCGGGGGAGCGGTTCGGCGAGGAGCGA
GGAACACCCCCGCAGGTGCGGGGACGAC	GAGGCGGCGCACCGCCGCCAGGTGCTCGGAGAG
GGAACACCCCCGCAGGTGCGGGGACGAC	AACCACGTCTCGGCGCACGTCTTGTGGCAGGGC
GGAACACCCCCGCAGGTGCGGGGACGAC	TAAAGTTCGGTGCCTAGCCCCCATGGAGGTCCG
GGAACACCCCCGCAGGTGCGGGGACGAC	GACCTGTCACCCGGATCGGACGACCTCACCCTC
GGAACACCCCCGCAGGTGCGGGGACGAC	CCCGGTGCAGACGCGGAGCGTTATCGCGGCGTG
GGAACACCCCCGCAGGTGCGGGGACGAC	CGCTGTCCGCGACCGACCCCGGCTGGATATCCA
GGAACACCCCCGCAGGTGCGGGGACGAC	TTTGGGGTCGGACAGAGAGCGACGCGCACGACC
GGAACACCCCCGCAGGTGCGGGGACGAC

>NZ_CP009922|2|2|4961964-4963213|CRISPRCasFinder
GGAACACCCCCGCAGGTGCGGGGACGAC	GTGCAGACGCGCCGTGGTGGCCTGCACCTGTAC
GGAACACCCCCGCAGGTGCGGGGACGAC	TACCAGCTGCCGCTGGAGGTGATCTGCCACCTC
GGAACACCCCCGCAGGTGCGGGGACGAC	TCGGGTCCACCCGCTCCGCCTCGCGCCGCAGGGC
GGAACACTCCCGCAGGTGCGGGGACGAC	CCACCGGCGAGAGTCGGGTCACCGTGCCCGACC
GGAACACCCCCGCAGGTGCGGGGACGAC	CGACCACGGTTTGCAGCTCGTCACCGATACCGC
GGAACACCCCCGCAGGTGCGGGGACGAC	AGATGTGGTATGCCGTGATCACCAGCAGCGCTG
GGAACACCCCCGCAGGTGCGGGGACGAC	GCCGGAATAGGCGATAGCGATGCCACCACGGAAC
GGAACACCCCCGCAGGTGCGGGGACGAC	TTGCGGGCCGCACGCCAGTGCTCCGCGCGGGCC
GGAACACCCCCGCAGGTGCGGGGACGAC	GAGCGAGAGCCGATGGACGACGCGCTACGCACG
GGAACACTCCCGCAGGTGCGGGGACGAC	CGCGACAACAGCGGCAGCTGCAACGGGGCCGAC
GGAACACCCCCGCAGGTGCGGGGACGAC	TGCCCCCACAGGCCGGGGCCCATCTGGAAGCCG
GGAACACCCCCGCAGGTGCGGGGACGAC	CTGGACGCGCAGGTCGTGTACGAGAACGACCAC
GGAACACCCCCGCAGGTGCGGGGACGAC	CCAGCGGCGGGGGAGCGGTTCGGCGAGGAGCGA
GGAACACCCCCGCAGGTGCGGGGACGAC	GAGGCGGCGCACCGCCGCCAGGTGCTCGGAGAG
GGAACACCCCCGCAGGTGCGGGGACGAC	AACCACGTCTCGGCGCACGTCTTGTGGCAGGGC
GGAACACCCCCGCAGGTGCGGGGACGAC	TAAAGTTCGGTGCCTAGCCCCCATGGAGGTCCG
GGAACACCCCCGCAGGTGCGGGGACGAC	GACCTGTCACCCGGATCGGACGACCTCACCCTC
GGAACACCCCCGCAGGTGCGGGGACGAC	CCCGGTGCAGACGCGGAGCGTTATCGCGGCGTG
GGAACACCCCCGCAGGTGCGGGGACGAC	CGCTGTCCGCGACCGACCCCGGCTGGATATCCA
GGAACACCCCCGCAGGTGCGGGGACGAC	TTTGGGGTCGGACAGAGAGCGACGCGCACGACC
GGAACACCCCCGCAGGTGCGGGGACGAC

>NZ_CP009922|2|1|4961964-4963213|CRT
GGAACACCCCCGCAGGTGCGGGGACGAC	GTGCAGACGCGCCGTGGTGGCCTGCACCTGTAC
GGAACACCCCCGCAGGTGCGGGGACGAC	TACCAGCTGCCGCTGGAGGTGATCTGCCACCTC
GGAACACCCCCGCAGGTGCGGGGACGAC	TCGGGTCCACCCGCTCCGCCTCGCGCCGCAGGGC
GGAACACTCCCGCAGGTGCGGGGACGAC	CCACCGGCGAGAGTCGGGTCACCGTGCCCGACC
GGAACACCCCCGCAGGTGCGGGGACGAC	CGACCACGGTTTGCAGCTCGTCACCGATACCGC
GGAACACCCCCGCAGGTGCGGGGACGAC	AGATGTGGTATGCCGTGATCACCAGCAGCGCTG
GGAACACCCCCGCAGGTGCGGGGACGAC	GCCGGAATAGGCGATAGCGATGCCACCACGGAAC
GGAACACCCCCGCAGGTGCGGGGACGAC	TTGCGGGCCGCACGCCAGTGCTCCGCGCGGGCC
GGAACACCCCCGCAGGTGCGGGGACGAC	GAGCGAGAGCCGATGGACGACGCGCTACGCACG
GGAACACTCCCGCAGGTGCGGGGACGAC	CGCGACAACAGCGGCAGCTGCAACGGGGCCGAC
GGAACACCCCCGCAGGTGCGGGGACGAC	TGCCCCCACAGGCCGGGGCCCATCTGGAAGCCG
GGAACACCCCCGCAGGTGCGGGGACGAC	CTGGACGCGCAGGTCGTGTACGAGAACGACCAC
GGAACACCCCCGCAGGTGCGGGGACGAC	CCAGCGGCGGGGGAGCGGTTCGGCGAGGAGCGA
GGAACACCCCCGCAGGTGCGGGGACGAC	GAGGCGGCGCACCGCCGCCAGGTGCTCGGAGAG
GGAACACCCCCGCAGGTGCGGGGACGAC	AACCACGTCTCGGCGCACGTCTTGTGGCAGGGC
GGAACACCCCCGCAGGTGCGGGGACGAC	TAAAGTTCGGTGCCTAGCCCCCATGGAGGTCCG
GGAACACCCCCGCAGGTGCGGGGACGAC	GACCTGTCACCCGGATCGGACGACCTCACCCTC
GGAACACCCCCGCAGGTGCGGGGACGAC	CCCGGTGCAGACGCGGAGCGTTATCGCGGCGTG
GGAACACCCCCGCAGGTGCGGGGACGAC	CGCTGTCCGCGACCGACCCCGGCTGGATATCCA
GGAACACCCCCGCAGGTGCGGGGACGAC	TTTGGGGTCGGACAGAGAGCGACGCGCACGACC
GGAACACCCCCGCAGGTGCGGGGACGAC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009922.3|WP_046725010.1|4961630_4961822_+|DUF397-domain-containing-protein	unknown	unknown	gnl|CDD|377231
NZ_CP009922.3|WP_046725009.1|4960746_4961634_+|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl|CDD|379262
NZ_CP009922.3|WP_046725013.1|4969128_4970274_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl|CDD|378153
NZ_CP009922.3|WP_030730432.1|4974296_4975826_-|UDP-N-acetylglucosamine-1-carboxyvinyltransferase	unknown	unknown	gnl|CDD|238796
NZ_CP009922.3|WP_046725018.1|4976006_4976450_+|SIP-domain-containing-protein	unknown	unknown	gnl|CDD|368208
NZ_CP009922.3|WP_046725011.1|4966591_4968370_+|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09729_cas8e_CAS-I-E	gnl|CDD|378189
NZ_CP009922.3|WP_046725017.1|4972983_4973262_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	pfam09707_cas2_CAS-I-E	gnl|CDD|378244
NZ_CP009922.3|WP_046725854.1|4963448_4966373_+|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl|CDD|182031
NZ_CP009922.3|WP_030730387.1|4954744_4955716_+|magnesium-transporter-CorA-family-protein	unknown	unknown	gnl|CDD|213356
NZ_CP009922.3|WP_046725008.1|4960127_4960577_-|ATP-binding-protein	unknown	unknown	gnl|CDD|340413
NZ_CP009922.3|WP_030730385.1|4952269_4953268_-|ornithine-carbamoyltransferase	unknown	unknown	gnl|CDD|179366
NZ_CP009922.3|WP_046725016.1|4971928_4972987_+|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl|CDD|274693
NZ_CP009922.3|WP_046725012.1|4968366_4969047_+|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09670_cse2gr11_CAS-I-E	gnl|CDD|378191
NZ_CP009922.3|WP_148236154.1|4955743_4956019_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP009922.3|WP_046725015.1|4971123_4971924_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	pfam08798_cas6e_CAS-I-E:CAS-IV	gnl|CDD|378050
NZ_CP009922.3|WP_046725014.1|4970273_4971119_+|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09756_cas5_CAS-I-E	gnl|CDD|187886
NZ_CP009922.3|WP_078847114.1|4957694_4960001_+|MMPL-family-transporter	unknown	unknown	gnl|CDD|225272
NZ_CP009922.3|WP_030730392.1|4956187_4956805_+|hypothetical-protein	unknown	unknown	gnl|CDD|173776
NZ_CP009922.3|WP_046725007.1|4956857_4957505_-|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|224228
NZ_CP009922.3|WP_030730386.1|4953369_4954605_-|arginine-deiminase	unknown	unknown	gnl|CDD|234949

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_CP009922.3|WP_046725016.1|4971928_4972987_+|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	2.2e-104	343.0	0.1
NZ_CP009922.3|WP_046725013.1|4969128_4970274_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	8.9e-107	352.4	0.1
NZ_CP009922.3|WP_046725014.1|4970273_4971119_+|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09756_cas5_CAS-I-E	4.6e-57	187.4	0.3
NZ_CP009922.3|WP_046725011.1|4966591_4968370_+|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09729_cas8e_CAS-I-E	9.2e-97	319.7	4.5
NZ_CP009922.3|WP_046725015.1|4971123_4971924_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	pfam08798_cas6e_CAS-I-E:CAS-IV	1.3e-58	193.3	0.0
NZ_CP009922.3|WP_046725012.1|4968366_4969047_+|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09670_cse2gr11_CAS-I-E	2.7e-25	84.2	0.4
NZ_CP009922.3|WP_046725854.1|4963448_4966373_+|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	2e-55	183.1	0.0
NZ_CP009922.3|WP_046725017.1|4972983_4973262_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	pfam09707_cas2_CAS-I-E	1.8e-34	112.5	0.3

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP009922.3|WP_046725010.1|4961630_4961822_+|DUF397-domain-containing-protein	gnl|CDD|377231	pfam04149, DUF397, Domain of unknown function (DUF397). The function of this family is unknown.	8.51164e-20
NZ_CP009922.3|WP_046725009.1|4960746_4961634_+|helix-turn-helix-domain-containing-protein	gnl|CDD|379262	pfam13560, HTH_31, Helix-turn-helix domain. This domain is a helix-turn-helix domain that probably binds to DNA.	2.03838e-06
NZ_CP009922.3|WP_046725013.1|4969128_4970274_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl|CDD|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	5.9232e-140
NZ_CP009922.3|WP_030730432.1|4974296_4975826_-|UDP-N-acetylglucosamine-1-carboxyvinyltransferase	gnl|CDD|238796	cd01555, UdpNAET, UDP-N-acetylglucosamine enolpyruvyl transferase catalyzes enolpyruvyl transfer as part of the first step in the biosynthesis of peptidoglycan, a component of the bacterial cell wall. The reaction is phosphoenolpyruvate + UDP-N-acetyl-D-glucosamine = phosphate + UDP-N-acetyl-3-(1-carboxyvinyl)-D-glucosamine. This enzyme is of interest as a potential target for anti-bacterial agents. The only other known enolpyruvyl transferase is the related 5-enolpyruvylshikimate-3-phosphate synthase.	7.51989e-129
NZ_CP009922.3|WP_046725018.1|4976006_4976450_+|SIP-domain-containing-protein	gnl|CDD|368208	pfam04954, SIP, Siderophore-interacting protein.	0.000149612
NZ_CP009922.3|WP_046725011.1|4966591_4968370_+|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl|CDD|378189	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1). Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This entry, represented by CT1972 from Chlorobaculum tepidum, is found in the CRISPR/Cas subtype Ecoli regions of many bacteria (most of which are mesophiles), and not in Archaea. It is designated Cse1.	1.25861e-98
NZ_CP009922.3|WP_046725017.1|4972983_4973262_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl|CDD|378244	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978). This entry represents a minor branch of the Cas2 family of CRISPR-associated protein which are found in IPR003799. Cas proteins are found adjacent to a characteristic short, palindromic repeat cluster termed CRISPR, a probable mobile DNA element.	5.22466e-42
NZ_CP009922.3|WP_046725854.1|4963448_4966373_+|CRISPR-associated-helicase/endonuclease-Cas3	gnl|CDD|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	1.21024e-66
NZ_CP009922.3|WP_030730387.1|4954744_4955716_+|magnesium-transporter-CorA-family-protein	gnl|CDD|213356	cd12822, TmCorA-like, Thermotoga maritima CorA-like family. This family belongs to the MIT superfamily of essential membrane proteins involved in transporting divalent cations (uptake or efflux) across membranes. Members of the Thermotoga maritima CorA_like family are found in all three kingdoms of life. It is a functionally diverse family, in addition to the CorA Co2+ transporter from the hyperthermophilic Thermotoga maritima, it includes three Saccharomyces cerevisiae members: two plasma membrane proteins, the Mg2+ transporter Alr1p/Swc3p and the putative Mg2+ transporter, Alr2p, and the vacuole membrane protein Mnr2p, a putative Mg2+ transporter. Thermotoga maritima CorA forms funnel-shaped homopentamers, the tip of the funnel is formed from two C-terminal transmembrane (TM) helices from each monomer, and the large opening of the funnel from the N-terminal cytoplasmic domains. The GMN signature motif of the MIT superfamily occurs just after TM1, mutation within this motif is known to abolish Mg2+ transport by Alr1p. Natural variants in this signature sequence may be associated with the transport of different divalent cations. The functional diversity of the MIT superfamily may also be due to minor structural differences regulating gating, substrate selection, and transport.	1.56073e-108
NZ_CP009922.3|WP_046725008.1|4960127_4960577_-|ATP-binding-protein	gnl|CDD|340413	cd16936, HATPase_RsbW-like, Histidine kinase-like ATPase domain of RsbW, an anti sigma-B factor and serine-protein kinase involved in regulating sigma-B during stress in Bacilli, and related domains. This family includes histidine kinase-like ATPase (HATPase) domain of RsbW, an anti sigma-B factor as well as a serine-protein kinase involved in regulating sigma-B during stress in Bacilli. The alternative sigma factor sigma-B is an important regulator of the general stress response of Bacillus cereus and B. subtilis. RsbW is an anti-sigma factor while RsbV is an anti-sigma factor antagonist (anti-anti-sigma factor). RsbW can also act as a kinase on RsbV. In a partner-switching mechanism, RsbW, RsbV, and sigma-B participate as follows: in non-stressed cells, sigma-B is present in an inactive form complexed with RsbW; in this form, sigma-B is unable to bind to RNA polymerase. Under stress, RsbV binds to RsbW, forming an RsbV-RsbW complex, and sigma-B is released to bind to RNA polymerase. RsbW may then act as a kinase on RsbV, phosphorylating a serine residue; RsbW is then released to bind to sigma-B, hence blocking its ability to bind RNA polymerase. A phosphatase then dephosphorylates RsbV so that it can again form a complex with RsbW, leading to the release of sigma-B.	2.8808e-17
NZ_CP009922.3|WP_030730385.1|4952269_4953268_-|ornithine-carbamoyltransferase	gnl|CDD|179366	PRK02102, PRK02102, ornithine carbamoyltransferase; Validated.	0
NZ_CP009922.3|WP_046725016.1|4971928_4972987_+|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl|CDD|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	1.577e-125
NZ_CP009922.3|WP_046725012.1|4968366_4969047_+|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl|CDD|378191	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2). Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family of proteins, represented by CT1973 from Chlorobaculum tepidum, is encoded by genes found in the CRISPR/Cas subtype Ecoli regions of many bacteria (most of which are mesophiles), and not in Archaea. It is designated Cse2.	8.86012e-30
NZ_CP009922.3|WP_046725015.1|4971123_4971924_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl|CDD|378050	pfam08798, CRISPR_assoc, CRISPR associated protein. This domain forms an anti-parallel beta strand structure with flanking alpha helical regions.	3.47823e-70
NZ_CP009922.3|WP_046725014.1|4970273_4971119_+|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl|CDD|187886	cd09756, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	1.96894e-44
NZ_CP009922.3|WP_078847114.1|4957694_4960001_+|MMPL-family-transporter	gnl|CDD|225272	COG2409, COG2409, Predicted drug exporters of the RND superfamily [General function prediction only].	3.19507e-112
NZ_CP009922.3|WP_030730392.1|4956187_4956805_+|hypothetical-protein	gnl|CDD|173776	cd01026, TOPRIM_OLD, TOPRIM_OLD: topoisomerase-primase (TOPRIM) nucleotidyl transferase/hydrolase domain of the type found in bacterial and archaeal nucleases of the OLD (overcome lysogenization defect) family. The bacteriophage P2 OLD protein, which has DNase as well as RNase activity, consists of an N-terminal ABC-type ATPase domain and a C-terminal Toprim domain; the nuclease activity of OLD is stimulated by ATP, though the ATPase activity is not DNA-dependent. Functional details on OLD are scant and further experimentation is required to define the relationship between the ATPase and Toprim nuclease domains. The TOPRIM domain has two conserved motifs, one of which centers at a conserved glutamate and the other one at two conserved aspartates (DxD). The conserved glutamate may act as a general acid in strand cleavage by nucleases. The DXD motif may co-ordinate Mg2+, a cofactor required for full catalytic function.	2.17414e-08
NZ_CP009922.3|WP_046725007.1|4956857_4957505_-|TetR/AcrR-family-transcriptional-regulator	gnl|CDD|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	7.36909e-11
NZ_CP009922.3|WP_030730386.1|4953369_4954605_-|arginine-deiminase	gnl|CDD|234949	PRK01388, PRK01388, arginine deiminase; Provisional.	0

Protein sequences

>NZ_CP009922.3|WP_046725010.1|4961630_4961822_+|DUF397-domain-containing-protein
MSSGTTGLAWFKSSYSGSEGDSCVEIAITEQAIHVRDSKDPTHPPFTISRQGWSPFVRFAIQH
>NZ_CP009922.3|WP_046725009.1|4960746_4961634_+|helix-turn-helix-domain-containing-protein
MDIAEENTAPATVAEALPAPAGEYEREPHPSDSLRTFGAVVQALREHAGLSRVELGERVRYSRHTVESVELGRRMPDEAFVERAEEALGNTGALRRAARHLTRGEAGLAAWFRRWARLEREAVSLCTYECRLVPGLLQSETYARAVFEGTIPLRTDEELEAQLAARMHRQETMRERPTVPFSFIVEEHVFRRRFGDAQAMRELIDHVLERSAPRNVSLQVVPLEGGLHACLDGPVQVLETPEGRRLGYSEGQKNGRLISDAKEVSALCQRYDTLRSQALSPGASRDLLERLRGEL
>NZ_CP009922.3|WP_046725008.1|4960127_4960577_-|ATP-binding-protein
MNQATPHVGATVRTSSQLFSSTWRGARLARLLGVDELRCWGAPEDLVERAEIVIAELATNAVLHGRVPGRDFRFGMVFAPSAGCLRVEVTDARGDVFPQAPPVCTTVDELLPSGRGLALVAALSEHWDVVPYPPSGKTVRAVLSTRSGG
>NZ_CP009922.3|WP_078847114.1|4957694_4960001_+|MMPL-family-transporter
MAWQLFRLGRWSFRHRWTVVGIWTLLLLTLAVGATTLSGRTNDNFELSGLESTQAFDLIKERDPEAAPDGATARIVFQAPENASLTDPAGQQAVTEALAALTTDNVHAVLDPFTYGTITEDGRTGYASVSYAHSAADLSPADREALETARDIAERAGLTATVGGDVLGVEMDGALAELMGIAIALVVLALTFGSLLAAGMPLLTALVGVGIGVAAIATLTGFTELSTTTPALGTMLGLAVGIDYALFILSRYQSEVRQGRPLEEAAGRAVGTAGSAVVFAGLTVIIALVGLSVCGIGFLTEMGLGGAFTVAIAVLVALTLLPALLGLAGPRVTGRRSPKKPTAASDADDAPATRPRTLGRRWVEGLARYRWPALVAGIAIAAVAALPAASLQLALPGDSTKPAGSDARVAYDVISDEFGAGANGPLLVVIDTDRAPDPASAVDTATQTLATLAARDDSSIAAVIPALTSDNPEAVQAYTQQLATARLATLTVIPVAGPSHQSTKDLVADLRTTLADLPEQTGARAMVTGLTAVDVDISNALIDVFPLYLAVVVGLAVILLIAVFRSLWVPLKAALGFLFSVGAALGATVAVFQWGWLNQLVGLDATGPVLFLLPILLTGILFGLAMDYEVFLVTRMREAYVHGTPARQAVIDGFTHSARVVGAAALIMVGVFAGFTLTDDIILKTIGFALAVGVLVDAFLVRMLIVPAVMFIIGRRIWWMPRAMDRLIPTVDVEGEALAARLAANGPHTPENNAAAAPNRSATREPIA
>NZ_CP009922.3|WP_046725007.1|4956857_4957505_-|TetR/AcrR-family-transcriptional-regulator
MTGQGPSDDRPPRQDGETKRGKYAKGLARRQQIIDEVLAVYDRLGFEGTSLRAVAEAIGVTHPVLKHHFGTREQLFLEVLQEYDRRFLDTTERDAGSFIDLVQRSAEHSMRVPGLMALLNSMVAHALEAGNDRSRAHFSERYAHLRGEIRTLLEEGRAAGTVRSDIPLDEAASLVLAVADGLSTQWLLDESADLKSGLLLLERLLQPPGVQAPAS
>NZ_CP009922.3|WP_030730392.1|4956187_4956805_+|hypothetical-protein
MADMESFREAVITWAAGGPGDVAAELAARLPVRAAVLLEGPSDVAAVEALAAGRGRKLDAEGVCVLPIGGAMSVGRFARLLGPEGLGLRLTGLCDARERPFYEKALAPTAASPRTFFVCAADLEDELIRALGVPRVRELIRAEGDLRALETFERQPAQRERTAHQRMRRFLGTKKGRKIHYGRVLVEALGPRDVPAPLEELFATL
>NZ_CP009922.3|WP_148236154.1|4955743_4956019_-|hypothetical-protein
MNQTTHQTPGRAMEHRTARWTLFLFAATGLLALLASPVIALYGLLFGAGGLVATGVLARRHDSVATTAATVIFAGLLAGSLPYLLAGAFLP
>NZ_CP009922.3|WP_030730387.1|4954744_4955716_+|magnesium-transporter-CorA-family-protein
MARSRLYRGGSLIREDFPVQEISDHLADPATLIWLDLLHPSAEKLARVGQEFGLHELALEDAAKAGQRPKLDRYRAHEFFSGYAVIVEPGGGLRTTEIAAFITGQALITVRQDDGFDIDDVVARWDDSPDLADQGVGFLLHGLLDHLVDGHFQAVQQMDDAIEELEELLFAEDPGRIRQVQRDAYELRKSLVGLRRVVLPMREVVNTLMRPGLGVVTGPLMPYYQDIYDHVLRAAEWTESLRDMVASVMETNLSVQSNRMNLIMKKVTSWAAIIAVPTAITGFYGQNVPYPGFSDHFGLITSSTLIVGITVLLFVLFRRNDWL
>NZ_CP009922.3|WP_030730386.1|4953369_4954605_-|arginine-deiminase
MTFHVDSETGRLRRVILHRPGLELKRLTPSNKNDLLFDDVLWVRRAQQEHDTFAELLRERGVTVHLFGELLAESLAIPAARGLVLDRVFDEREYGPLATDELRSVFEGLPDEELAEALIGGMTKREYLDAHREPSSVRFHVMEQDDFLLQPLPNHLFTRDTSAWVYDGVAINAMRWPARQRESVHFEAIYGHHPLFAGPGAGAFHRWSEGQGGHPSTIEGGDVLVIGGGAVLVGMSERTTPQAVELLARRLFATGSARVIVALDMPKRRAFMHLDTVLTMVDAESFTQYAGLGMLRSYTIEPGSDDGGLKVTDHPPEHMHRAIAAALGLDSIRVLTATQDVHAAEREQWDDGCNVLAVEPGVVVTYERNVTTNTYLRRSGIEVLEIPGSELGRGRGGPRCMSCPVERDPVS
>NZ_CP009922.3|WP_030730385.1|4952269_4953268_-|ornithine-carbamoyltransferase
MATELTGRHLLKELDLTPEEFRSLVTLAAELKAARRAGAEERRLVGKNIALIFEKASTRTRCSFEVAAADQGAATTYLDPSGTHVGYKESAKDTARVLGRMFDAIQYRGSAQQTVEELAAHAGVPVYNGLTDDWHPTQMLADVLTMTEHSDRPLEEIAYAYLGDARNNMGNSYLATGALLGMDVRIVAPRVLWPEDTVVAAARELAERTGARITLTEDVAEGVAGADFVATDVWVSMGEPVEAWEERIGLLTPYAVTMDVLRATGNPDVRFLHCLPAFHDLGTQVGRELHERYGLSSLEVTDEVFESQHSVVFDQAENRMHTIKAVMVATLG
>NZ_CP009922.3|WP_046725854.1|4963448_4966373_+|CRISPR-associated-helicase/endonuclease-Cas3
MVGALWGKSAEKAGGRRNVLLSHLLDTAAVAERLWGGFLAPSTQLVLDEIAGGPGKGRRFFSWLCGVHDYGKATPAFQRMWPEGAETVQKAGLTWYDHLLLRKTWRHDRAGGHLLCRDLAAVGWTEQQIDWLWPLIAGHHGRFPTRRELTPARTARGHLAGTGSWPLVQRALLERFTTELGFENIAAAAPARMPSRAVQLHLSGLIVMADWIASDEQHFAGVDDPRLVTYEAARDRAAKAWSALGLHRGWGQHELPGPEAFHDRFGQHPRPSQTMVIEAARRMTAPGLLVVEAPMGEGKTKAALLAAEILAARFGADGVFVGMPTQATSDPMFGQVRTWLGRIGEELPPRVALLHGKRMFNPEWRAMVAGSENDDDASRFGGVDEYGDCWDDDPYGVTSDGRDGATPAAGPGARGPAEWFLGRKRGLLCPFVVGTIDQLLLAATRTKHVMLRMSGLMGKVVILDEVHAADIHMSQFLMEGLRWLGQAGVPVVLLSATLPPRQRQDLVSSYLAGALSREEYTADGLPEPGGYPSVTAAWPAGRAGHPAEVDGSPEPRYLVEHCPGWRTDLSVVLDILPEAVPPPHAQRKERDEAEEAAARAVADLLERELATGGCALVIRNSVARAQKLHTLLRKRYGAEVHLLHGRLAAGDRADRTARCLRLLGSARETGGERPKRLILVATQLAEQSFDVDADLLVTDLAPVDLLLQRIGRLHRHDGVRRPDRLAEPRVVVTGVTALDSGAPRFPGVSEAVYGRFLLLRAAAQVRQALNGPQAGDGAAGWRVPGQVPELVATGYETSDAALPPRWREAAETARMKWEATERQRAETASASLLTRRGDREARTLAGLHVAGRAENGDDATAEWLVRDGAPTVEVILVVREGSVPHTLNGRALSVNGDVGEELLDDLLAGTVRLPQSLTEAALRELRPLPGWHGHARLRYCPALELDHRRTAVLGEYEVTYDHALGLLQRQLTAT
>NZ_CP009922.3|WP_046725011.1|4966591_4968370_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MTSFNLLDAPWLSVQVVDPGAPHATGPGGTVEVGLRELLLHAERYRDLAVDIPTQKPAIFRQVLLPILVDALGYPADIGDGLALLRAGSLTPAHRDLLTAYLEEHRPRFDLFDPDDPFGQVAGLRTAKGETKGSALLVATAATGNNVPLFASRTEGDPLELTPAQAARWLLHTHCWDTAAIKTGAVGDPRVKAGKTTGNPTGPLGQLGVVMPLGRTLFETLVLNIPFGRAPLSDDRPQWRRRRTDGRVEDTLSCALPAWQERASRGPLDLWTWQSRRVRLIPEDTPAGTRVTRVVVSAGDRLVATPDHEPHTAWRLPPAPKRPRTGAAAKRPVPAALPRRHQTGKAGWRGLEAFLAVEREQRDARGERSGFRTSVLLDQLGGVRDRLPADYPLRVELTGIAYGNQSAVVEDLYADAIPLPLVALDPDGPLRTSLLEATEQAEQLASALNHLSGDLMRAAGSEPIPWDKGQRPGETLLYALDAPARLLLLDLRAAPEDFEATERALEKWERNAAAHTWKVAEQTLATTAPGVFSGRRVTRDKTERVYRLATAEQSFRARMAVVLPRWTATRRVAATTVSPDAELPDTEGRPNL
>NZ_CP009922.3|WP_046725012.1|4968366_4969047_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MTTDATHIAGVPDATDTPHALTLPSPASGAADTAAPAAGDTTEQTVRYWNRYVTAGGTWRRHSAGRPTSPPGEDLATMRLGLAQSVGEIFSLWPFYTTPCDGRIPALLEAEHAALALYGLHQQSRRDPMHRPRVGLGTALANLRHSGRFGAEALDRRVDAAANATSVAALRHQLRGLVTQLRTGGQPLDYDMLLGDLHDWRLPDRRRRVRRRWGLEYYAGRPEPRG
>NZ_CP009922.3|WP_046725013.1|4969128_4970274_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTSRQYIDVHIIQTVPPANLNRDDQGNPKEAHFGGTRRSRVSSQAWKRATRLHFTERISPQDLGTRTKRIAGKLAERIGDIAQVDTATASRLTGALLTPLGITAGRKEGDTAYLFFYGRRQLDAVAALVGDRAAELAALDDEKLAAEIKQLPVRDTFRTGHPIDVALFGRMVADIPALNVDAAVQVAHALSTHTTELEFDYYTAVDDENEKEETGAGMIGTIGFNSATLYRYATIGMHQLVDNLSDEKSAADAVVQFLTSFARSMPTGYQNSFAHHTLPRLVAVTVRTDQPVNLVSAFEEPVTPATETRAGIAPASIQRLAREQLTAVRAWGNAPAFTAHCHTLAPEHGETVGVLEEAFGAPRSFDVLLTDVRTHLTGGEA
>NZ_CP009922.3|WP_046725014.1|4970273_4971119_+|type-I-E-CRISPR-associated-protein-Cas5/CasD
MATTPPRAEAVLLLRLAGPLQAWGDRSTFNRRETRPTPTKSGVIGLLAAAAGRARQDPVDDLSHLGLGIRVDQPGSLLRDYHTVSDYRGTPLPQAGVSAKGIQKPTSPAKHTHVTTRYYLQDAVFLAAVAGPGELLDGLQHAVRNPAFPLALGRRSCPPTQPLCLGIRDTDTETALRETPWQVSRQARERYAARWRREHGAARSAVPATVPCPVTLDDPEGPDVLNDVPLSFDPLRRSFADRRVRHDWFSVPTGFPGRPGSGTPDSPEDATGHDPFALLGW
>NZ_CP009922.3|WP_046725015.1|4971123_4971924_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MTYLSRIRINPLRAMGRTLLASPRAMHGAVAGGIPGGPDSERVLWRLDADNPHRPHLFVLTRSKPDWTHIVESAGWPDADGEHAAVRDYTSLLERIALGREFAFRLTANPVQNTLKPLRATPEQQRRLDAAAASEQTTRPRGFRIGHRTANAQLRWFLERTERWGFTVPPARHVPPGSEEDIATSPETDVPRDLRITERRRHSFTKKEERSARGGPRVTLTTATFEGRLRVTNPALFTDRLLNGIGPAKAYGCGLLTLAPLPEGSR
>NZ_CP009922.3|WP_046725016.1|4971928_4972987_+|type-I-E-CRISPR-associated-endonuclease-Cas1
MGDIWWKADPHDLHRVVDRVSSVYIERSHLDRDENAVVIVNKKQTVRLPAAMIAVVLLGPGTRVTHGAIRLLADSGTAVCWVGEQGVRMYAAGLGPARGAGLLHRQAWLVTRPKERLSVARAMYGMRFPGEDVSTATMQQLRGREGTRIRRLYRAHARRTGVPWDGRVYKAGDAFAAGDDLNRMLSAANAALYGICHAVIVGIGASPGLGFVHTGSAISFVLDIADLYKADYTIPLAFDLAAKGLREERDARLGLRDSIAETKLLGRIVTDIKALLAADGADIDAPAVGELWDERLGAVPSCVNWADGSGAFPRDCDTPPDAAPRTADMGDEHIAVIGPEFDEPADPPEPPR
>NZ_CP009922.3|WP_046725017.1|4972983_4973262_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MTVIVLIAAPEGLRGHLTRWMVEVDAGVFVGNPSRRVRDRLWELLATRIGDGQAVLVERANNEQGWAVRTAGRDRWRPVDYDGLILSARNRR
>NZ_CP009922.3|WP_030730432.1|4974296_4975826_-|UDP-N-acetylglucosamine-1-carboxyvinyltransferase
MTDDYLARIGQLIRDARQHRGWTQLQLADALGTSQSAVNRIERGNQNISLEMIARIGEALDSEIVSLGYAGPMHLRVVGGRRLSGSIDVKTSKNACVALLCASLLNSGRTVLRRVARIEEVFRILEVLNSIGVRTRWINGGADLEIQPPAQLDLNGMDADAARRTRSIIMFLGPLLHRETHFKLPYAGGCDLGTRTIEPHMTALRRFGLEITATEGMYHATVNRQINPERPIVLTERGDTATENAVLAAARRDGVTVIRNASSNYMVQDLCFFLEELGVRVEGVGTTTLTVHGVPDIDRDVDYSPSEDPVEAMSLIAAAVITESELTIRRVPVEFLEVELAVLEGMGLNHDLSAEYPADNGRTRLADLTVRPSKLEAPIDKIHPMPFPGLNIDNVPFFAAIAASAHGSTLIHDWVYDNRAIYLTDLNRLGGRLQLLDPHRVLVEGTTRWRAAEMMCPPALRPAVVVLLAMMAAEGTSVLRNVYVINRGYEDLAERLNSVGAQIETFRDI
>NZ_CP009922.3|WP_046725018.1|4976006_4976450_+|SIP-domain-containing-protein
MARTPTFFADYAERRGFVTRVDAVGLVGEGLLRIGSAGEGLRAVEPGPCDVTAFRVAARDFQHCAPETLNPAAGRATVLHRRGQPEALGLVEAEAVGTVARLAPAVAYLAGHGQSVQVQRDLLRTVRGLDRRTIRTQPYWATGRTGL

Crispr_ID: NZ_CP009922_3

• CRISPR_ID: NZ_CP009922_3
• CRISPR_location: 4973327-4974208
• CRISPR_type: TypeI-E
• Repeat_type: I-C,I-E,II-B
• Spacer_info: 14 spacers
• Cas_protein_info: cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

Consensus repeat of NZ_CP009922_3

Consensus_repeat	Method
GTGGTCCCCGCACACGCGGGGATGGTCC	CRISPRCasFinder
GTGGTCCCCGCACACGCGGGGATGGTCC	CRT
GTGGTCCCCGCACACGCGGGGATGGTCC	PILER-CR

spacers of NZ_CP009922_3

>3.1|4973355|33|NZ_CP009922|CRISPRCasFinder,CRT
CCCCACGGGGTCTCTGGTGTTGGCGCACCTACC
>3.2|4973416|33|NZ_CP009922|CRISPRCasFinder,CRT
CCCCACGGGGTCTCTGGTGTTGGCGCACCTACC
>3.3|4973477|33|NZ_CP009922|CRISPRCasFinder,CRT
GCGGCGGCCGGCGGCGCGCACGTGCGCACCTGC
>3.4|4973538|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR
CCGGTGAGCGGCCGGGACGCCGGCTTCCTCTTC
>3.5|4973599|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR
CACGGGCTGTCCGGCGCCCGCGCGTGGGCGTGG
>3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR
CGTCGGCATCGCCACCGGCCCGGCGAACCTGGT
>3.7|4973721|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR
GACGACGCCGCCCAGCCGGACGGAGCCACGGAC
>3.8|4973782|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR
CCGGCGTGTGGGGCTCGCCTACACGCTGGATCT
>3.9|4973843|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR
CGAGACCGCCCCCGGCATCACGCTCGCCCGGCT
>3.10|4973904|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR
CCAGTCGGGGGCGTCGGCGGTGCCCATGTTGCA
>3.11|4973965|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR
CCGCCCACAGAGGAGATCGACATGGCCCGCAGC
>3.12|4974026|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR
CGACCAGATGGCCACCCTCATCCAGCTGCTGTC
>3.13|4974087|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR
GCGCCATGATCGCGGGGTCGAGACCGACCTCAC
>3.14|4974148|33|NZ_CP009922|CRISPRCasFinder,CRT
GCACGACGGGGGCCCGATGCCTCCCGAGGCTCC

CRISPR arrays and Neighbor proteins around NZ_CP009922_3

CRISPR arrays

The CRISPR arrays of NZ_CP009922_3

>merge|NZ_CP009922|3|4973327-4974208|CRISPRCasFinder,CRT,PILER-CR
GTGGTCCCCGCACACGCGGGGATGGTCCCCCCACGGGGTCTCTGGTGTTGGCGCACCTACCGTGGTCCCCGCACACGCGGGGATGGTCCCCCCACGGGGTCTCTGGTGTTGGCGCACCTACCGTGGTCCCCGCACACGCGGGGATGGTCCGCGGCGGCCGGCGGCGCGCACGTGCGCACCTGCGTGGTCCCCGCACACGCGGGGATGGTCCCCGGTGAGCGGCCGGGACGCCGGCTTCCTCTTCGTGGTCCCCGCACACGCGGGGATGGTCCCACGGGCTGTCCGGCGCCCGCGCGTGGGCGTGGGTGGTCCCCGCACACGCGGGGATGGTCCCGTCGGCATCGCCACCGGCCCGGCGAACCTGGTGTGGTCCCCGCACACGCGGGGATGGTCCGACGACGCCGCCCAGCCGGACGGAGCCACGGACGTGGTCCCCGCACAGGCGGGGATGGTCCCCGGCGTGTGGGGCTCGCCTACACGCTGGATCTGTGGTCCCCGCACACGCGGGGATGGTCCCGAGACCGCCCCCGGCATCACGCTCGCCCGGCTGTGGTCCCCGCACACGCGGGGATGGTCCCCAGTCGGGGGCGTCGGCGGTGCCCATGTTGCAGTGGTCCCCGCACACGCGGGGATGGTCCCCGCCCACAGAGGAGATCGACATGGCCCGCAGCGTGGTCCCCGCACACGCGGGGATGGTCCCGACCAGATGGCCACCCTCATCCAGCTGCTGTCGTGGTCCCCGCACACGCGGGGATGGTCCGCGCCATGATCGCGGGGTCGAGACCGACCTCACGTGGTCCCCGCACACGCGGGGATGGTCCGCACGACGGGGGCCCGATGCCTCCCGAGGCTCCGTAGGCCCCGCACACGCGGGGACGGCCT

>NZ_CP009922|3|3|4973327-4974208|CRISPRCasFinder
GTGGTCCCCGCACACGCGGGGATGGTCC	CCCCACGGGGTCTCTGGTGTTGGCGCACCTACC
GTGGTCCCCGCACACGCGGGGATGGTCC	CCCCACGGGGTCTCTGGTGTTGGCGCACCTACC
GTGGTCCCCGCACACGCGGGGATGGTCC	GCGGCGGCCGGCGGCGCGCACGTGCGCACCTGC
GTGGTCCCCGCACACGCGGGGATGGTCC	CCGGTGAGCGGCCGGGACGCCGGCTTCCTCTTC
GTGGTCCCCGCACACGCGGGGATGGTCC	CACGGGCTGTCCGGCGCCCGCGCGTGGGCGTGG
GTGGTCCCCGCACACGCGGGGATGGTCC	CGTCGGCATCGCCACCGGCCCGGCGAACCTGGT
GTGGTCCCCGCACACGCGGGGATGGTCC	GACGACGCCGCCCAGCCGGACGGAGCCACGGAC
GTGGTCCCCGCACAGGCGGGGATGGTCC	CCGGCGTGTGGGGCTCGCCTACACGCTGGATCT
GTGGTCCCCGCACACGCGGGGATGGTCC	CGAGACCGCCCCCGGCATCACGCTCGCCCGGCT
GTGGTCCCCGCACACGCGGGGATGGTCC	CCAGTCGGGGGCGTCGGCGGTGCCCATGTTGCA
GTGGTCCCCGCACACGCGGGGATGGTCC	CCGCCCACAGAGGAGATCGACATGGCCCGCAGC
GTGGTCCCCGCACACGCGGGGATGGTCC	CGACCAGATGGCCACCCTCATCCAGCTGCTGTC
GTGGTCCCCGCACACGCGGGGATGGTCC	GCGCCATGATCGCGGGGTCGAGACCGACCTCAC
GTGGTCCCCGCACACGCGGGGATGGTCC	GCACGACGGGGGCCCGATGCCTCCCGAGGCTCC
GTAGGCCCCGCACACGCGGGGACGGCCT

>NZ_CP009922|3|2|4973327-4974208|CRT
GTGGTCCCCGCACACGCGGGGATGGTCC	CCCCACGGGGTCTCTGGTGTTGGCGCACCTACC
GTGGTCCCCGCACACGCGGGGATGGTCC	CCCCACGGGGTCTCTGGTGTTGGCGCACCTACC
GTGGTCCCCGCACACGCGGGGATGGTCC	GCGGCGGCCGGCGGCGCGCACGTGCGCACCTGC
GTGGTCCCCGCACACGCGGGGATGGTCC	CCGGTGAGCGGCCGGGACGCCGGCTTCCTCTTC
GTGGTCCCCGCACACGCGGGGATGGTCC	CACGGGCTGTCCGGCGCCCGCGCGTGGGCGTGG
GTGGTCCCCGCACACGCGGGGATGGTCC	CGTCGGCATCGCCACCGGCCCGGCGAACCTGGT
GTGGTCCCCGCACACGCGGGGATGGTCC	GACGACGCCGCCCAGCCGGACGGAGCCACGGAC
GTGGTCCCCGCACAGGCGGGGATGGTCC	CCGGCGTGTGGGGCTCGCCTACACGCTGGATCT
GTGGTCCCCGCACACGCGGGGATGGTCC	CGAGACCGCCCCCGGCATCACGCTCGCCCGGCT
GTGGTCCCCGCACACGCGGGGATGGTCC	CCAGTCGGGGGCGTCGGCGGTGCCCATGTTGCA
GTGGTCCCCGCACACGCGGGGATGGTCC	CCGCCCACAGAGGAGATCGACATGGCCCGCAGC
GTGGTCCCCGCACACGCGGGGATGGTCC	CGACCAGATGGCCACCCTCATCCAGCTGCTGTC
GTGGTCCCCGCACACGCGGGGATGGTCC	GCGCCATGATCGCGGGGTCGAGACCGACCTCAC
GTGGTCCCCGCACACGCGGGGATGGTCC	GCACGACGGGGGCCCGATGCCTCCCGAGGCTCC
GTAGGCCCCGCACACGCGGGGACGGCCT

>NZ_CP009922|3|2|4973510-4974147|PILER-CR
GTGGTCCCCGCACACGCGGGGATGGTCC	CCGGTGAGCGGCCGGGACGCCGGCTTCCTCTTC
GTGGTCCCCGCACACGCGGGGATGGTCC	CACGGGCTGTCCGGCGCCCGCGCGTGGGCGTGG
GTGGTCCCCGCACACGCGGGGATGGTCC	CGTCGGCATCGCCACCGGCCCGGCGAACCTGGT
GTGGTCCCCGCACACGCGGGGATGGTCC	GACGACGCCGCCCAGCCGGACGGAGCCACGGAC
GTGGTCCCCGCACAGGCGGGGATGGTCC	CCGGCGTGTGGGGCTCGCCTACACGCTGGATCT
GTGGTCCCCGCACACGCGGGGATGGTCC	CGAGACCGCCCCCGGCATCACGCTCGCCCGGCT
GTGGTCCCCGCACACGCGGGGATGGTCC	CCAGTCGGGGGCGTCGGCGGTGCCCATGTTGCA
GTGGTCCCCGCACACGCGGGGATGGTCC	CCGCCCACAGAGGAGATCGACATGGCCCGCAGC
GTGGTCCCCGCACACGCGGGGATGGTCC	CGACCAGATGGCCACCCTCATCCAGCTGCTGTC
GTGGTCCCCGCACACGCGGGGATGGTCC	GCGCCATGATCGCGGGGTCGAGACCGACCTCAC
GTGGTCCCCGCACACGCGGGGATGGTCC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009922.3|WP_046725010.1|4961630_4961822_+|DUF397-domain-containing-protein	unknown	unknown	gnl|CDD|377231
NZ_CP009922.3|WP_046725009.1|4960746_4961634_+|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl|CDD|379262
NZ_CP009922.3|WP_046725016.1|4971928_4972987_+|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl|CDD|274693
NZ_CP009922.3|WP_030730432.1|4974296_4975826_-|UDP-N-acetylglucosamine-1-carboxyvinyltransferase	unknown	unknown	gnl|CDD|238796
NZ_CP009922.3|WP_046725018.1|4976006_4976450_+|SIP-domain-containing-protein	unknown	unknown	gnl|CDD|368208
NZ_CP009922.3|WP_046725011.1|4966591_4968370_+|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09729_cas8e_CAS-I-E	gnl|CDD|378189
NZ_CP009922.3|WP_046725013.1|4969128_4970274_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl|CDD|378153
NZ_CP009922.3|WP_046725854.1|4963448_4966373_+|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl|CDD|182031
NZ_CP009922.3|WP_043177204.1|4979560_4981015_+|carbohydrate-ABC-transporter,-N-acetylglucosamine/diacetylchitobiose-binding-protein	unknown	unknown	gnl|CDD|274816
NZ_CP009922.3|WP_046725855.1|4982021_4982882_+|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl|CDD|223472
NZ_CP009922.3|WP_030730454.1|4985538_4986345_+|sugar-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224053
NZ_CP009922.3|WP_030730449.1|4982956_4984129_+|ROK-family-transcriptional-regulator	unknown	unknown	gnl|CDD|224851
NZ_CP009922.3|WP_030730444.1|4981110_4982007_+|sugar-ABC-transporter-permease	unknown	unknown	gnl|CDD|224096
NZ_CP009922.3|WP_046725017.1|4972983_4973262_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	pfam09707_cas2_CAS-I-E	gnl|CDD|378244
NZ_CP009922.3|WP_046725012.1|4968366_4969047_+|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09670_cse2gr11_CAS-I-E	gnl|CDD|378191
NZ_CP009922.3|WP_046725019.1|4976630_4979351_+|aconitate-hydratase-AcnA	unknown	unknown	gnl|CDD|236445
NZ_CP009922.3|WP_046725015.1|4971123_4971924_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	pfam08798_cas6e_CAS-I-E:CAS-IV	gnl|CDD|378050
NZ_CP009922.3|WP_030730457.1|4986341_4987568_+|ABC-transporter-permease	unknown	unknown	gnl|CDD|226669
NZ_CP009922.3|WP_046725014.1|4970273_4971119_+|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09756_cas5_CAS-I-E	gnl|CDD|187886
NZ_CP009922.3|WP_107073954.1|4984350_4985460_+|substrate-binding-domain-containing-protein	unknown	unknown	gnl|CDD|380650

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_CP009922.3|WP_046725012.1|4968366_4969047_+|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09670_cse2gr11_CAS-I-E	2.7e-25	84.2	0.4
NZ_CP009922.3|WP_046725016.1|4971928_4972987_+|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	2.2e-104	343.0	0.1
NZ_CP009922.3|WP_046725014.1|4970273_4971119_+|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09756_cas5_CAS-I-E	4.6e-57	187.4	0.3
NZ_CP009922.3|WP_046725011.1|4966591_4968370_+|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09729_cas8e_CAS-I-E	9.2e-97	319.7	4.5
NZ_CP009922.3|WP_046725015.1|4971123_4971924_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	pfam08798_cas6e_CAS-I-E:CAS-IV	1.3e-58	193.3	0.0
NZ_CP009922.3|WP_046725017.1|4972983_4973262_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	pfam09707_cas2_CAS-I-E	1.8e-34	112.5	0.3
NZ_CP009922.3|WP_046725854.1|4963448_4966373_+|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	2e-55	183.1	0.0
NZ_CP009922.3|WP_046725013.1|4969128_4970274_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	8.9e-107	352.4	0.1

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP009922.3|WP_046725010.1|4961630_4961822_+|DUF397-domain-containing-protein	gnl|CDD|377231	pfam04149, DUF397, Domain of unknown function (DUF397). The function of this family is unknown.	8.51164e-20
NZ_CP009922.3|WP_046725009.1|4960746_4961634_+|helix-turn-helix-domain-containing-protein	gnl|CDD|379262	pfam13560, HTH_31, Helix-turn-helix domain. This domain is a helix-turn-helix domain that probably binds to DNA.	2.03838e-06
NZ_CP009922.3|WP_046725016.1|4971928_4972987_+|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl|CDD|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	1.577e-125
NZ_CP009922.3|WP_030730432.1|4974296_4975826_-|UDP-N-acetylglucosamine-1-carboxyvinyltransferase	gnl|CDD|238796	cd01555, UdpNAET, UDP-N-acetylglucosamine enolpyruvyl transferase catalyzes enolpyruvyl transfer as part of the first step in the biosynthesis of peptidoglycan, a component of the bacterial cell wall. The reaction is phosphoenolpyruvate + UDP-N-acetyl-D-glucosamine = phosphate + UDP-N-acetyl-3-(1-carboxyvinyl)-D-glucosamine. This enzyme is of interest as a potential target for anti-bacterial agents. The only other known enolpyruvyl transferase is the related 5-enolpyruvylshikimate-3-phosphate synthase.	7.51989e-129
NZ_CP009922.3|WP_046725018.1|4976006_4976450_+|SIP-domain-containing-protein	gnl|CDD|368208	pfam04954, SIP, Siderophore-interacting protein.	0.000149612
NZ_CP009922.3|WP_046725011.1|4966591_4968370_+|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl|CDD|378189	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1). Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This entry, represented by CT1972 from Chlorobaculum tepidum, is found in the CRISPR/Cas subtype Ecoli regions of many bacteria (most of which are mesophiles), and not in Archaea. It is designated Cse1.	1.25861e-98
NZ_CP009922.3|WP_046725013.1|4969128_4970274_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl|CDD|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	5.9232e-140
NZ_CP009922.3|WP_046725854.1|4963448_4966373_+|CRISPR-associated-helicase/endonuclease-Cas3	gnl|CDD|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	1.21024e-66
NZ_CP009922.3|WP_043177204.1|4979560_4981015_+|carbohydrate-ABC-transporter,-N-acetylglucosamine/diacetylchitobiose-binding-protein	gnl|CDD|274816	TIGR03851, chitin_NgcE, carbohydrate ABC transporter, N-acetylglucosamine/diacetylchitobiose-binding protein. Members of this protein family are the substrate-binding protein, a lipid-anchored protein of Gram-positive bacteria in all examples found so far, that include NgcE of the chitin-degrader, Streptomyces olivaceoviridis, and close homologs from other species likely to share the same function. NgcE binds both N-acetylglucosamine and the chitin dimer, N,N'-diacetylchitobiose. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	0
NZ_CP009922.3|WP_046725855.1|4982021_4982882_+|carbohydrate-ABC-transporter-permease	gnl|CDD|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	4.03354e-77
NZ_CP009922.3|WP_030730454.1|4985538_4986345_+|sugar-ABC-transporter-ATP-binding-protein	gnl|CDD|224053	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism].	2.86728e-110
NZ_CP009922.3|WP_030730449.1|4982956_4984129_+|ROK-family-transcriptional-regulator	gnl|CDD|224851	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism].	2.34411e-64
NZ_CP009922.3|WP_030730444.1|4981110_4982007_+|sugar-ABC-transporter-permease	gnl|CDD|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	1.74929e-59
NZ_CP009922.3|WP_046725017.1|4972983_4973262_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl|CDD|378244	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978). This entry represents a minor branch of the Cas2 family of CRISPR-associated protein which are found in IPR003799. Cas proteins are found adjacent to a characteristic short, palindromic repeat cluster termed CRISPR, a probable mobile DNA element.	5.22466e-42
NZ_CP009922.3|WP_046725012.1|4968366_4969047_+|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl|CDD|378191	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2). Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family of proteins, represented by CT1973 from Chlorobaculum tepidum, is encoded by genes found in the CRISPR/Cas subtype Ecoli regions of many bacteria (most of which are mesophiles), and not in Archaea. It is designated Cse2.	8.86012e-30
NZ_CP009922.3|WP_046725019.1|4976630_4979351_+|aconitate-hydratase-AcnA	gnl|CDD|236445	PRK09277, PRK09277, aconitate hydratase AcnA.	0
NZ_CP009922.3|WP_046725015.1|4971123_4971924_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl|CDD|378050	pfam08798, CRISPR_assoc, CRISPR associated protein. This domain forms an anti-parallel beta strand structure with flanking alpha helical regions.	3.47823e-70
NZ_CP009922.3|WP_030730457.1|4986341_4987568_+|ABC-transporter-permease	gnl|CDD|226669	COG4214, XylH, ABC-type xylose transport system, permease component [Carbohydrate transport and metabolism].	2.10792e-89
NZ_CP009922.3|WP_046725014.1|4970273_4971119_+|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl|CDD|187886	cd09756, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	1.96894e-44
NZ_CP009922.3|WP_107073954.1|4984350_4985460_+|substrate-binding-domain-containing-protein	gnl|CDD|380650	cd19995, PBP1_ABC_xylose_binding-like, periplasmic xylose-like sugar-binding component of the ABC-type transport systems. Periplasmic xylose-binding component of the ABC-type transport systems that belong to a family of pentose/hexose sugar-binding proteins of the type 1 periplasmic binding protein (PBP1) superfamily, which consists of two alpha/beta globular domains connected by a three-stranded hinge. This Venus flytrap-like domain undergoes a transition from an open to a closed conformational state upon ligand binding. Moreover, the periplasmic xylose-binding protein is homologous to the ligand-binding domain of eukaryotic receptors such as glutamate receptor (GluR) and DNA-binding transcriptional repressors such as LacI and GalR.	8.493e-100

Protein sequences

>NZ_CP009922.3|WP_046725017.1|4972983_4973262_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MTVIVLIAAPEGLRGHLTRWMVEVDAGVFVGNPSRRVRDRLWELLATRIGDGQAVLVERANNEQGWAVRTAGRDRWRPVDYDGLILSARNRR
>NZ_CP009922.3|WP_046725016.1|4971928_4972987_+|type-I-E-CRISPR-associated-endonuclease-Cas1
MGDIWWKADPHDLHRVVDRVSSVYIERSHLDRDENAVVIVNKKQTVRLPAAMIAVVLLGPGTRVTHGAIRLLADSGTAVCWVGEQGVRMYAAGLGPARGAGLLHRQAWLVTRPKERLSVARAMYGMRFPGEDVSTATMQQLRGREGTRIRRLYRAHARRTGVPWDGRVYKAGDAFAAGDDLNRMLSAANAALYGICHAVIVGIGASPGLGFVHTGSAISFVLDIADLYKADYTIPLAFDLAAKGLREERDARLGLRDSIAETKLLGRIVTDIKALLAADGADIDAPAVGELWDERLGAVPSCVNWADGSGAFPRDCDTPPDAAPRTADMGDEHIAVIGPEFDEPADPPEPPR
>NZ_CP009922.3|WP_046725015.1|4971123_4971924_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MTYLSRIRINPLRAMGRTLLASPRAMHGAVAGGIPGGPDSERVLWRLDADNPHRPHLFVLTRSKPDWTHIVESAGWPDADGEHAAVRDYTSLLERIALGREFAFRLTANPVQNTLKPLRATPEQQRRLDAAAASEQTTRPRGFRIGHRTANAQLRWFLERTERWGFTVPPARHVPPGSEEDIATSPETDVPRDLRITERRRHSFTKKEERSARGGPRVTLTTATFEGRLRVTNPALFTDRLLNGIGPAKAYGCGLLTLAPLPEGSR
>NZ_CP009922.3|WP_046725014.1|4970273_4971119_+|type-I-E-CRISPR-associated-protein-Cas5/CasD
MATTPPRAEAVLLLRLAGPLQAWGDRSTFNRRETRPTPTKSGVIGLLAAAAGRARQDPVDDLSHLGLGIRVDQPGSLLRDYHTVSDYRGTPLPQAGVSAKGIQKPTSPAKHTHVTTRYYLQDAVFLAAVAGPGELLDGLQHAVRNPAFPLALGRRSCPPTQPLCLGIRDTDTETALRETPWQVSRQARERYAARWRREHGAARSAVPATVPCPVTLDDPEGPDVLNDVPLSFDPLRRSFADRRVRHDWFSVPTGFPGRPGSGTPDSPEDATGHDPFALLGW
>NZ_CP009922.3|WP_046725013.1|4969128_4970274_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTSRQYIDVHIIQTVPPANLNRDDQGNPKEAHFGGTRRSRVSSQAWKRATRLHFTERISPQDLGTRTKRIAGKLAERIGDIAQVDTATASRLTGALLTPLGITAGRKEGDTAYLFFYGRRQLDAVAALVGDRAAELAALDDEKLAAEIKQLPVRDTFRTGHPIDVALFGRMVADIPALNVDAAVQVAHALSTHTTELEFDYYTAVDDENEKEETGAGMIGTIGFNSATLYRYATIGMHQLVDNLSDEKSAADAVVQFLTSFARSMPTGYQNSFAHHTLPRLVAVTVRTDQPVNLVSAFEEPVTPATETRAGIAPASIQRLAREQLTAVRAWGNAPAFTAHCHTLAPEHGETVGVLEEAFGAPRSFDVLLTDVRTHLTGGEA
>NZ_CP009922.3|WP_046725012.1|4968366_4969047_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MTTDATHIAGVPDATDTPHALTLPSPASGAADTAAPAAGDTTEQTVRYWNRYVTAGGTWRRHSAGRPTSPPGEDLATMRLGLAQSVGEIFSLWPFYTTPCDGRIPALLEAEHAALALYGLHQQSRRDPMHRPRVGLGTALANLRHSGRFGAEALDRRVDAAANATSVAALRHQLRGLVTQLRTGGQPLDYDMLLGDLHDWRLPDRRRRVRRRWGLEYYAGRPEPRG
>NZ_CP009922.3|WP_046725011.1|4966591_4968370_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MTSFNLLDAPWLSVQVVDPGAPHATGPGGTVEVGLRELLLHAERYRDLAVDIPTQKPAIFRQVLLPILVDALGYPADIGDGLALLRAGSLTPAHRDLLTAYLEEHRPRFDLFDPDDPFGQVAGLRTAKGETKGSALLVATAATGNNVPLFASRTEGDPLELTPAQAARWLLHTHCWDTAAIKTGAVGDPRVKAGKTTGNPTGPLGQLGVVMPLGRTLFETLVLNIPFGRAPLSDDRPQWRRRRTDGRVEDTLSCALPAWQERASRGPLDLWTWQSRRVRLIPEDTPAGTRVTRVVVSAGDRLVATPDHEPHTAWRLPPAPKRPRTGAAAKRPVPAALPRRHQTGKAGWRGLEAFLAVEREQRDARGERSGFRTSVLLDQLGGVRDRLPADYPLRVELTGIAYGNQSAVVEDLYADAIPLPLVALDPDGPLRTSLLEATEQAEQLASALNHLSGDLMRAAGSEPIPWDKGQRPGETLLYALDAPARLLLLDLRAAPEDFEATERALEKWERNAAAHTWKVAEQTLATTAPGVFSGRRVTRDKTERVYRLATAEQSFRARMAVVLPRWTATRRVAATTVSPDAELPDTEGRPNL
>NZ_CP009922.3|WP_046725854.1|4963448_4966373_+|CRISPR-associated-helicase/endonuclease-Cas3
MVGALWGKSAEKAGGRRNVLLSHLLDTAAVAERLWGGFLAPSTQLVLDEIAGGPGKGRRFFSWLCGVHDYGKATPAFQRMWPEGAETVQKAGLTWYDHLLLRKTWRHDRAGGHLLCRDLAAVGWTEQQIDWLWPLIAGHHGRFPTRRELTPARTARGHLAGTGSWPLVQRALLERFTTELGFENIAAAAPARMPSRAVQLHLSGLIVMADWIASDEQHFAGVDDPRLVTYEAARDRAAKAWSALGLHRGWGQHELPGPEAFHDRFGQHPRPSQTMVIEAARRMTAPGLLVVEAPMGEGKTKAALLAAEILAARFGADGVFVGMPTQATSDPMFGQVRTWLGRIGEELPPRVALLHGKRMFNPEWRAMVAGSENDDDASRFGGVDEYGDCWDDDPYGVTSDGRDGATPAAGPGARGPAEWFLGRKRGLLCPFVVGTIDQLLLAATRTKHVMLRMSGLMGKVVILDEVHAADIHMSQFLMEGLRWLGQAGVPVVLLSATLPPRQRQDLVSSYLAGALSREEYTADGLPEPGGYPSVTAAWPAGRAGHPAEVDGSPEPRYLVEHCPGWRTDLSVVLDILPEAVPPPHAQRKERDEAEEAAARAVADLLERELATGGCALVIRNSVARAQKLHTLLRKRYGAEVHLLHGRLAAGDRADRTARCLRLLGSARETGGERPKRLILVATQLAEQSFDVDADLLVTDLAPVDLLLQRIGRLHRHDGVRRPDRLAEPRVVVTGVTALDSGAPRFPGVSEAVYGRFLLLRAAAQVRQALNGPQAGDGAAGWRVPGQVPELVATGYETSDAALPPRWREAAETARMKWEATERQRAETASASLLTRRGDREARTLAGLHVAGRAENGDDATAEWLVRDGAPTVEVILVVREGSVPHTLNGRALSVNGDVGEELLDDLLAGTVRLPQSLTEAALRELRPLPGWHGHARLRYCPALELDHRRTAVLGEYEVTYDHALGLLQRQLTAT
>NZ_CP009922.3|WP_046725010.1|4961630_4961822_+|DUF397-domain-containing-protein
MSSGTTGLAWFKSSYSGSEGDSCVEIAITEQAIHVRDSKDPTHPPFTISRQGWSPFVRFAIQH
>NZ_CP009922.3|WP_046725009.1|4960746_4961634_+|helix-turn-helix-domain-containing-protein
MDIAEENTAPATVAEALPAPAGEYEREPHPSDSLRTFGAVVQALREHAGLSRVELGERVRYSRHTVESVELGRRMPDEAFVERAEEALGNTGALRRAARHLTRGEAGLAAWFRRWARLEREAVSLCTYECRLVPGLLQSETYARAVFEGTIPLRTDEELEAQLAARMHRQETMRERPTVPFSFIVEEHVFRRRFGDAQAMRELIDHVLERSAPRNVSLQVVPLEGGLHACLDGPVQVLETPEGRRLGYSEGQKNGRLISDAKEVSALCQRYDTLRSQALSPGASRDLLERLRGEL
>NZ_CP009922.3|WP_030730432.1|4974296_4975826_-|UDP-N-acetylglucosamine-1-carboxyvinyltransferase
MTDDYLARIGQLIRDARQHRGWTQLQLADALGTSQSAVNRIERGNQNISLEMIARIGEALDSEIVSLGYAGPMHLRVVGGRRLSGSIDVKTSKNACVALLCASLLNSGRTVLRRVARIEEVFRILEVLNSIGVRTRWINGGADLEIQPPAQLDLNGMDADAARRTRSIIMFLGPLLHRETHFKLPYAGGCDLGTRTIEPHMTALRRFGLEITATEGMYHATVNRQINPERPIVLTERGDTATENAVLAAARRDGVTVIRNASSNYMVQDLCFFLEELGVRVEGVGTTTLTVHGVPDIDRDVDYSPSEDPVEAMSLIAAAVITESELTIRRVPVEFLEVELAVLEGMGLNHDLSAEYPADNGRTRLADLTVRPSKLEAPIDKIHPMPFPGLNIDNVPFFAAIAASAHGSTLIHDWVYDNRAIYLTDLNRLGGRLQLLDPHRVLVEGTTRWRAAEMMCPPALRPAVVVLLAMMAAEGTSVLRNVYVINRGYEDLAERLNSVGAQIETFRDI
>NZ_CP009922.3|WP_046725018.1|4976006_4976450_+|SIP-domain-containing-protein
MARTPTFFADYAERRGFVTRVDAVGLVGEGLLRIGSAGEGLRAVEPGPCDVTAFRVAARDFQHCAPETLNPAAGRATVLHRRGQPEALGLVEAEAVGTVARLAPAVAYLAGHGQSVQVQRDLLRTVRGLDRRTIRTQPYWATGRTGL
>NZ_CP009922.3|WP_046725019.1|4976630_4979351_+|aconitate-hydratase-AcnA
MSANTFDARATLRVGDESYEIFRLDKVEGAARLPYSLKVLLENLLRTEDGANITAEHITALGSWDPNAQPSQEIQFTPARVIMQDFTGVPCVVDLATMREAVRELGGDPARINPLAPAELVIDHSVIADKFGTPDAFQQNVELEYGRNRERYQFLRWGQTAFDEFKVVPPGTGIVHQVNIEHLARTVMVRNGQAYPDTLVGTDSHTTMVNGLGVLGWGVGGIEAEAAMLGQPVSMLIPRVVGFKLTGALPTGTTATDLVLTITEMLRKHGVVGKFVEFYGEGVSSIPLANRATIGNMSPEFGSTAAIFPIDEETISYLRLTGRDAQQLALVEAYAKEQGLWLDTDNEPVFSEYLELDLATVVPSIAGPKRPQDRIALADAKQKFGADVRNYVSAADIDEAGKESFPASDAPAVSNGVPSKPVTVTTADGSTFELDHGAVTVAAITSCTNTSNPSVMVGAALLAKKAVERGLTRKPWVKTTLAPGSKVVMDYYDRAGLTPYLDKLGFNLVGYGCTTCIGNSGPLPEEISQAVNDNDLAVVSVLSGNRNFEGRINPDVKMNYLASPPLVVAYALAGSMKIDITTEPLGTDSEGKPVYLADIWPTEKEIEDVVASAIGQEMFGQSYADVFAGDAQWNSLSIPTGSTFEWDPESTYVRKPPYFEGLTMDPTPVSDITGARVLAKLGDSVTTDHISPAGAIKADTPAGKYLTEHGVTRRDFNSYGSRRGNHEVMIRGTFANIRLRNQIAPGTEGGYTRDFTQADGPVSFIYDASQNYQAAGVPLAILAGKEYGSGSSRDWAAKGTALLGVRAVIAESYERIHRSNLIGMGVLPLQFPVGASAESLGLTGEETFSFTGVTELNEGRVPATVKVTTDTGVEFDATVRIDTPGEADYYRNGGIMQYVLRSLLRK
>NZ_CP009922.3|WP_043177204.1|4979560_4981015_+|carbohydrate-ABC-transporter,-N-acetylglucosamine/diacetylchitobiose-binding-protein
MTSRPHSPHTPHPRYVGRRTLLTRTAAASLFGIPALGALTSCASGGSGSGGNTNVERVDPTADNPLGAHPDGEIEVVIFDGGFGDQYAIDAEKLYEERFGSVTHVKTQEIQSRIQPRMVKGDPPDVIDNSGAEAMDIAALIRNDQVHDLTELLDAPSLDDPSVTVRDTLQPGTVEMGQFGTQAVYRINYAYHVYGQWYSRTALDRLDAEYPRTWDEMIAVCEKAKRAGMAGWTYAGQYPYYFNFTLYPFIAKIGGADVLRAIDNLEPNAWRHEAVRAAFEAYHELTARGFVLEGSPGLSHEESQDEWCAGRALFIPNGSWVENEAAKNTPADFDMAVGPPTSLDASDAMPFETIWASPGEPFFVPADAANVAGGMEFLRIMLGRESARNFTQLVSSLTCVRDSVDGLDLPPGLTSANDTLAAAGDHLVTPRMPDWYRQLNNEEIGGAIAAMMAGDIDPDEAITRCQRAADAAAADDSLVKFEHI
>NZ_CP009922.3|WP_030730444.1|4981110_4982007_+|sugar-ABC-transporter-permease
MDQYRFIGWFLAAPVLVFAVFVVSPFAQAFFYSMTDWTGYSAEFTFTGTENYERLWNDAKFWDALRNSLLLLVLAPLITLSLGLFFAFMLNAGGRRRGGQAIAGVSGTRLYKIFYFFPQVLSIAIIAVIWSRIYSPRSGILNEGLRTVGLDSLRQSDWLGGRFAVYCVLAVLCWAFVGFYVVLFSAAMSSIPHEIYEASLLDGATRPVTFFRITLPLTWGTVRTGWIYMGIQALDAFALVSIMVPEHGMDVLPSYLYDKAFRDGQAGYATAVGVVLFAVTLLFAGLMMRLARRERIEL
>NZ_CP009922.3|WP_046725855.1|4982021_4982882_+|carbohydrate-ABC-transporter-permease
MSRTRGDTRRAEGGALNVFAHSFLVLWTLLAAGPLIWVLLAAFRPHVDIVSDPFGWPTALDWENFTNAWTTANIGRYTLNSLIILSGSLTGTMLLGAMAAYVIARYDFRGNRAVHLLFTGGLMFPVFLALVPLFFVLDNFGLLNTRQGLILVYIAYSLPFTVFFLVSFFRTLPGAVQEAALLDGASHTRIFFQIMMPMARPGLISIGIFNFLGQWNQFVLPKVLNIGSPEDAVLPQGLAALMVQQQYEGDWGALYAGVSMAMLPVLVVYVTFQRQVQSGLTAGAVR
>NZ_CP009922.3|WP_030730449.1|4982956_4984129_+|ROK-family-transcriptional-regulator
MQTPGSQSSLHRANLERVVRAVRTAGALTQADIARTTGLSAATVSNIVRELKDGGHVEVRSTTSAGGRRARSVSLAADAGIVVGIDFGHSHLRVAVGNLSHQVLAEEAEPFDVDASAAEGFDRAEKLVARLLGTAGVDRAKILGMGLGVPGPIDVATGILGSTAILPGWRGTNPREELAARTGVPVHVDNDANLGALGELVWGSGRGCDDLAYIKVASGVGAGLVMDGRIYRGPGGTAGEIGHITLDESGPVCRCGNRGCLETFTAARHVLPLLHASHGPDLTMRRVVQLAREGDPGCRRVVADIGRHIGSGVAHLCNLLNPSRVVLGGDLAEAGEVALTPIRDSVSRYSIPSAARNLTLVPGALGGRAEVLGALALALSEVGDAALVDR
>NZ_CP009922.3|WP_107073954.1|4984350_4985460_+|substrate-binding-domain-containing-protein
MQLRPIAVGIVSLGLAAALTACGEAGGGGGSSDGDGKGGGEGKESGTIGLLLPENSTTRYESFDRPSIEGKIAELCPDCKVQYNNANEDTALQKQQFDAMLTQGVDVIILDAVDSASTASWVEEAAAQDVPVVAYDRLAEGDVAAYVSYDNFEVGRLQGQALIEALGDDAEGAGVVMINGSPTDPNAAMFKAGAHEVLHGVVDIVYESDVDGWDAALANEDVTGAVESLGGDAIDAVYSANDGMAAGIITALHAANLHDLVVGGQDAELAGLQRIIAGEQTFTIYKALVPQGELTAEIAVRVLRGEDFSDLTPDAIDSPTTEGVPSALLTPVTVTVENINDTVIADGFYTPEAICTGDYADACAAAGIG
>NZ_CP009922.3|WP_030730454.1|4985538_4986345_+|sugar-ABC-transporter-ATP-binding-protein
MTAAPVLELRGVSKRFGAVQALTDVDLEIRPGEVTALVGDNGAGKSTLVKTIAGVHPIDSGAIHFRGEPVRIARPHDAQELGIATVYQDLALCDNLDVVANLFLGREIRRHGTLDHVTMEQRSRELLDTLSIRIPSVRIPVASLSGGQRQVVAIARALIGSPEVVILDEPTAALGVEQTAQVLDLVERLRERGLAVILISHNMADVQAVADRVAVLRLGRNNGVFPVSGTSHETIIAAITGAADNAVSRRRDRLATPEPDERPQEEQS
>NZ_CP009922.3|WP_030730457.1|4986341_4987568_+|ABC-transporter-permease
MTEPAPDPRLLVRERGLAGYLTEFRRRISGGELGSLPVVVGLVIIAVVFEIQTGTFLTPGNLSNISVYIAGPGIMAVGIVLVLLLGEIDLSIGSMAGLSAALWAVLSVTHGVNDLLAIALAIAAGAAVGTLHGFFFAKIGVPAFVVTLAGFLGWSGLQIWVMGNEGTINIPRDSLVRDFTTHYFSDIAFAYGLAALITAGYVLALLRTERRRERAALATRPVAEIVLRGGLVALASFTVAYTLNQHRGLPLALVIFLGILFAGHFVLRHTTYGRQIYAVGGNAEAARRAGINVVRVRMTVFTIASSLAALGGLFWAAQAGGASKSLGSGNLLMNVIAAAVIGGTSLFGGRGWVWSALLGTLVIQSITTGLNLLGMAAEIQYMITGAVLLLAVVLDSVSRRTQRTAGRT

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP009922_3	3.13|4974087|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR	4974087-4974119	33	KY092484	Streptomyces phage Raleigh, complete genome	18477-18509	4	0.879
NZ_CP009922_3	3.9|4973843|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR	4973843-4973875	33	NZ_CP046573	Rhodococcus sp. WAY2 plasmid pRWAY01, complete sequence	154626-154658	5	0.848
NZ_CP009922_3	3.3|4973477|33|NZ_CP009922|CRISPRCasFinder,CRT	4973477-4973509	33	NZ_CP015881	Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence	1355506-1355538	6	0.818
NZ_CP009922_3	3.3|4973477|33|NZ_CP009922|CRISPRCasFinder,CRT	4973477-4973509	33	NZ_CP030263	Ensifer adhaerens strain Corn53 plasmid AA, complete sequence	817725-817757	6	0.818
NZ_CP009922_2	2.2|4962053|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT	4962053-4962085	33	NZ_CP027859	Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence	771138-771170	7	0.788
NZ_CP009922_2	2.2|4962053|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT	4962053-4962085	33	NC_013855	Azospirillum sp. B510 plasmid pAB510a, complete sequence	346911-346943	7	0.788
NZ_CP009922_2	2.2|4962053|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT	4962053-4962085	33	NZ_CP032054	Streptomyces clavuligerus strain F1D-5 plasmid pSCL1, complete sequence	372907-372939	7	0.788
NZ_CP009922_2	2.2|4962053|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT	4962053-4962085	33	NZ_CP054621	Azospirillum oryzae strain KACC 14407 plasmid unnamed6, complete sequence	695561-695593	7	0.788
NZ_CP009922_2	2.2|4962053|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT	4962053-4962085	33	NZ_CP016560	Streptomyces clavuligerus strain F613-1 plasmid pSCL4, complete sequence	30164-30196	7	0.788
NZ_CP009922_2	2.2|4962053|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT	4962053-4962085	33	NC_016585	Azospirillum lipoferum 4B plasmid AZO_p1, complete sequence	283147-283179	7	0.788
NZ_CP009922_2	2.3|4962114|34|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT	4962114-4962147	34	NZ_AP014706	Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_2p, complete sequence	213270-213303	7	0.794
NZ_CP009922_2	2.10|4962543|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT	4962543-4962575	33	NZ_CP030864	Streptomyces globosus strain LZH-48 plasmid unnamed2, complete sequence	317590-317622	7	0.788
NZ_CP009922_2	2.13|4962726|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT	4962726-4962758	33	NZ_CP029833	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed3, complete sequence	319015-319047	7	0.788
NZ_CP009922_2	2.14|4962787|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT	4962787-4962819	33	NZ_CP016613	Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence	906047-906079	7	0.788
NZ_CP009922_2	2.14|4962787|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT	4962787-4962819	33	NC_023283	Streptomyces sp. FR1 plasmid pFRL3, complete sequence	119336-119368	7	0.788
NZ_CP009922_2	2.14|4962787|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT	4962787-4962819	33	NC_023284	Streptomyces sp. F2 plasmid pFRL4, complete sequence	155964-155996	7	0.788
NZ_CP009922_2	2.14|4962787|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT	4962787-4962819	33	CP054917	Streptomyces sp. NA02950 plasmid unnamed, complete sequence	23345-23377	7	0.788
NZ_CP009922_2	2.14|4962787|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT	4962787-4962819	33	NZ_CP039340	Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence	785744-785776	7	0.788
NZ_CP009922_2	2.14|4962787|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT	4962787-4962819	33	NZ_CP016555	Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence	1446445-1446477	7	0.788
NZ_CP009922_2	2.14|4962787|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT	4962787-4962819	33	NZ_CP052069	Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence	1724865-1724897	7	0.788
NZ_CP009922_2	2.14|4962787|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT	4962787-4962819	33	NZ_CP052071	Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence	1809547-1809579	7	0.788
NZ_CP009922_2	2.14|4962787|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT	4962787-4962819	33	NZ_CP052075	Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence	1809514-1809546	7	0.788
NZ_CP009922_2	2.14|4962787|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT	4962787-4962819	33	NZ_CP052095	Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence	1794536-1794568	7	0.788
NZ_CP009922_2	2.14|4962787|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT	4962787-4962819	33	NZ_CP052105	Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence	1808257-1808289	7	0.788
NZ_CP009922_2	2.14|4962787|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT	4962787-4962819	33	NZ_CP052097	Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence	1794536-1794568	7	0.788
NZ_CP009922_2	2.14|4962787|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT	4962787-4962819	33	NZ_CP052115	Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence	1808356-1808388	7	0.788
NZ_CP009922_2	2.14|4962787|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT	4962787-4962819	33	NZ_CP052093	Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence	1794536-1794568	7	0.788
NZ_CP009922_2	2.14|4962787|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT	4962787-4962819	33	NZ_CP052101	Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence	1794536-1794568	7	0.788
NZ_CP009922_2	2.14|4962787|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT	4962787-4962819	33	NZ_CP052099	Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence	1794536-1794568	7	0.788
NZ_CP009922_2	2.14|4962787|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT	4962787-4962819	33	NZ_CP052107	Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence	1808352-1808384	7	0.788
NZ_CP009922_2	2.14|4962787|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT	4962787-4962819	33	NZ_CP052117	Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence	1808341-1808373	7	0.788
NZ_CP009922_2	2.14|4962787|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT	4962787-4962819	33	NZ_CP052129	Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence	1791851-1791883	7	0.788
NZ_CP009922_2	2.14|4962787|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT	4962787-4962819	33	NZ_CP052121	Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence	1808341-1808373	7	0.788
NZ_CP009922_2	2.14|4962787|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT	4962787-4962819	33	NZ_CP052073	Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence	1809338-1809370	7	0.788
NZ_CP009922_2	2.14|4962787|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT	4962787-4962819	33	NZ_CP052109	Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence	1808352-1808384	7	0.788
NZ_CP009922_2	2.14|4962787|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT	4962787-4962819	33	NZ_CP052091	Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence	1794541-1794573	7	0.788
NZ_CP009922_2	2.14|4962787|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT	4962787-4962819	33	NZ_CP052103	Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence	1808363-1808395	7	0.788
NZ_CP009922_2	2.14|4962787|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT	4962787-4962819	33	NZ_CP052119	Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence	1808164-1808196	7	0.788
NZ_CP009922_2	2.15|4962848|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT	4962848-4962880	33	ASHF01000034	Streptomyces sp. GBA 94-10 plasmid pGBA1, complete sequence, whole genome shotgun sequence	171066-171098	7	0.788
NZ_CP009922_3	3.3|4973477|33|NZ_CP009922|CRISPRCasFinder,CRT	4973477-4973509	33	NC_014309	Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome	1202436-1202468	7	0.788
NZ_CP009922_3	3.3|4973477|33|NZ_CP009922|CRISPRCasFinder,CRT	4973477-4973509	33	NZ_CP013381	Burkholderia sp. Bp5365 strain MSMB43 plasmid pMSMB43, complete sequence	2571-2603	7	0.788
NZ_CP009922_3	3.3|4973477|33|NZ_CP009922|CRISPRCasFinder,CRT	4973477-4973509	33	NZ_CP009547	Burkholderia sp. 2002721687 plasmid pBTU, complete sequence	115286-115318	7	0.788
NZ_CP009922_3	3.5|4973599|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR	4973599-4973631	33	NZ_CP011044	Clavibacter michiganensis subsp. insidiosus strain R1-1 plasmid pCI1, complete sequence	29239-29271	7	0.788
NZ_CP009922_3	3.5|4973599|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR	4973599-4973631	33	NZ_CP021035	Clavibacter michiganensis subsp. insidiosus strain R1-3 plasmid pCI1, complete sequence	29239-29271	7	0.788
NZ_CP009922_3	3.5|4973599|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR	4973599-4973631	33	NZ_CP021039	Clavibacter michiganensis subsp. insidiosus strain ATCC 10253 plasmid pCI1, complete sequence	29242-29274	7	0.788
NZ_CP009922_3	3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR	4973660-4973692	33	NZ_CP003988	Streptomyces sp. 769 plasmid pSGZL, complete sequence	41840-41872	7	0.788
NZ_CP009922_3	3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR	4973660-4973692	33	NZ_CP019465	Streptomyces autolyticus strain CGMCC0516 plasmid unnamed8, complete sequence	9831-9863	7	0.788
NZ_CP009922_2	2.2|4962053|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT	4962053-4962085	33	NZ_AP022607	Mycobacterium branderi strain JCM 12687 plasmid pJCM12687	816103-816135	8	0.758
NZ_CP009922_2	2.3|4962114|34|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT	4962114-4962147	34	NZ_CP032325	Azospirillum brasilense strain MTCC4035 plasmid p4, complete sequence	450840-450873	8	0.765
NZ_CP009922_2	2.3|4962114|34|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT	4962114-4962147	34	NZ_CP032349	Azospirillum brasilense strain MTCC4039 plasmid p3, complete sequence	572517-572550	8	0.765
NZ_CP009922_2	2.3|4962114|34|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT	4962114-4962147	34	NZ_CP022369	Azospirillum sp. TSH58 plasmid TSH58_p05, complete sequence	9376-9409	8	0.765
NZ_CP009922_2	2.3|4962114|34|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT	4962114-4962147	34	NZ_CP022369	Azospirillum sp. TSH58 plasmid TSH58_p05, complete sequence	567282-567315	8	0.765
NZ_CP009922_2	2.3|4962114|34|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT	4962114-4962147	34	NC_016587	Azospirillum lipoferum 4B plasmid AZO_p4, complete sequence	434055-434088	8	0.765
NZ_CP009922_2	2.3|4962114|34|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT	4962114-4962147	34	NZ_CP032342	Azospirillum brasilense strain MTCC4038 plasmid p3, complete sequence	613954-613987	8	0.765
NZ_CP009922_2	2.3|4962114|34|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT	4962114-4962147	34	NZ_CP033321	Azospirillum brasilense strain Cd plasmid p3, complete sequence	466624-466657	8	0.765
NZ_CP009922_2	2.3|4962114|34|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT	4962114-4962147	34	NZ_CP033323	Azospirillum brasilense strain Cd plasmid p5, complete sequence	201783-201816	8	0.765
NZ_CP009922_2	2.3|4962114|34|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT	4962114-4962147	34	NZ_CP033315	Azospirillum brasilense strain Sp 7 plasmid p3, complete sequence	523387-523420	8	0.765
NZ_CP009922_2	2.3|4962114|34|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT	4962114-4962147	34	NZ_CP033317	Azospirillum brasilense strain Sp 7 plasmid p5, complete sequence	208298-208331	8	0.765
NZ_CP009922_2	2.10|4962543|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT	4962543-4962575	33	NZ_CP025513	Neorhizobium sp. SOG26 plasmid unnamed2, complete sequence	75797-75829	8	0.758
NZ_CP009922_2	2.13|4962726|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT	4962726-4962758	33	NZ_CP034352	Streptomyces sp. W1SF4 plasmid p2, complete sequence	268167-268199	8	0.758
NZ_CP009922_2	2.13|4962726|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT	4962726-4962758	33	NZ_CP045548	Streptomyces sp. SYP-A7193 plasmid unnamed1, complete sequence	249239-249271	8	0.758
NZ_CP009922_2	2.13|4962726|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT	4962726-4962758	33	MK875798	Microbacterium phage Piperis, complete genome	38328-38360	8	0.758
NZ_CP009922_2	2.13|4962726|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT	4962726-4962758	33	MT818415	Microbacterium phage Scumberland, complete genome	38608-38640	8	0.758
NZ_CP009922_2	2.13|4962726|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT	4962726-4962758	33	NC_047993	Microbacterium phage Quhwah, complete genome	38983-39015	8	0.758
NZ_CP009922_2	2.13|4962726|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT	4962726-4962758	33	MN062719	Microbacterium phage PiperSansNom, complete genome	38675-38707	8	0.758
NZ_CP009922_2	2.13|4962726|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT	4962726-4962758	33	MN444877	Microbacterium phage Antares, complete genome	38596-38628	8	0.758
NZ_CP009922_2	2.14|4962787|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT	4962787-4962819	33	NZ_CP026091	Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence	1244554-1244586	8	0.758
NZ_CP009922_2	2.14|4962787|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT	4962787-4962819	33	NZ_CP026093	Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence	1244698-1244730	8	0.758
NZ_CP009922_2	2.19|4963092|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT	4963092-4963124	33	NZ_CP006368	Aureimonas sp. AU20 plasmid pAU20a, complete sequence	282315-282347	8	0.758
NZ_CP009922_3	3.3|4973477|33|NZ_CP009922|CRISPRCasFinder,CRT	4973477-4973509	33	NZ_CP010016	Burkholderia thailandensis 34 plasmid unnamed, complete sequence	188449-188481	8	0.758
NZ_CP009922_3	3.3|4973477|33|NZ_CP009922|CRISPRCasFinder,CRT	4973477-4973509	33	NZ_CP034186	Deinococcus sp. S14-83 strain S14-83T plasmid unnamed2, complete sequence	316313-316345	8	0.758
NZ_CP009922_3	3.4|4973538|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR	4973538-4973570	33	NC_013855	Azospirillum sp. B510 plasmid pAB510a, complete sequence	376024-376056	8	0.758
NZ_CP009922_3	3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR	4973660-4973692	33	NZ_CP023408	Streptomyces fungicidicus strain TXX3120 plasmid p1, complete sequence	299467-299499	8	0.758
NZ_CP009922_3	3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR	4973660-4973692	33	NZ_CP029358	Azospirillum sp. CFH 70021 plasmid unnamed3	145284-145316	8	0.758
NZ_CP009922_3	3.7|4973721|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR	4973721-4973753	33	NZ_CP026517	Deinococcus sp. NW-56 plasmid unnamed1, complete sequence	33871-33903	8	0.758
NZ_CP009922_3	3.7|4973721|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR	4973721-4973753	33	NZ_CP048816	Caulobacter rhizosphaerae strain KCTC 52515 plasmid unnamed	107270-107302	8	0.758
NZ_CP009922_3	3.9|4973843|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR	4973843-4973875	33	NZ_CP017563	Paraburkholderia sprentiae WSM5005 plasmid pl1WSM5005, complete sequence	631790-631822	8	0.758
NZ_CP009922_3	3.10|4973904|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR	4973904-4973936	33	NC_016113	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence	615488-615520	8	0.758
NZ_CP009922_3	3.10|4973904|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR	4973904-4973936	33	NC_017585	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence	1197579-1197611	8	0.758
NZ_CP009922_3	3.10|4973904|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR	4973904-4973936	33	NZ_CP050118	Deinococcus radiodurans strain BNK-50 plasmid pMP1, complete sequence	110972-111004	8	0.758
NZ_CP009922_3	3.10|4973904|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR	4973904-4973936	33	NZ_CP050122	Deinococcus radiodurans strain BND-54 plasmid pMP1, complete sequence	55472-55504	8	0.758
NZ_CP009922_3	3.10|4973904|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR	4973904-4973936	33	NZ_CP031502	Deinococcus radiodurans strain R1 dM1 plasmid pMP1, complete sequence	66029-66061	8	0.758
NZ_CP009922_3	3.10|4973904|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR	4973904-4973936	33	NC_010510	Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, complete sequence	437765-437797	8	0.758
NZ_CP009922_3	3.10|4973904|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR	4973904-4973936	33	NC_000958	Deinococcus radiodurans R1 plasmid MP1, complete sequence	90858-90890	8	0.758
NZ_CP009922_3	3.10|4973904|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR	4973904-4973936	33	NZ_CP020332	Martelella mediterranea DSM 17316 strain MACL11 plasmid pMM259, complete sequence	78367-78399	8	0.758
NZ_CP009922_3	3.13|4974087|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR	4974087-4974119	33	NZ_CP054621	Azospirillum oryzae strain KACC 14407 plasmid unnamed6, complete sequence	532517-532549	8	0.758
NZ_CP009922_3	3.14|4974148|33|NZ_CP009922|CRISPRCasFinder,CRT	4974148-4974180	33	NZ_CP040822	Paraoceanicella profunda strain D4M1 plasmid pD4M1D, complete sequence	31816-31848	8	0.758
NZ_CP009922_3	3.14|4974148|33|NZ_CP009922|CRISPRCasFinder,CRT	4974148-4974180	33	NZ_CP015441	Erythrobacter atlanticus strain s21-N3 plasmid unnamed, complete sequence	192834-192866	8	0.758
NZ_CP009922_3	3.14|4974148|33|NZ_CP009922|CRISPRCasFinder,CRT	4974148-4974180	33	NZ_CP040819	Paraoceanicella profunda strain D4M1 plasmid pD4M1A, complete sequence	477893-477925	8	0.758
NZ_CP009922_2	2.2|4962053|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT	4962053-4962085	33	NZ_CP026519	Deinococcus sp. NW-56 plasmid unnamed3, complete sequence	27474-27506	9	0.727
NZ_CP009922_2	2.3|4962114|34|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT	4962114-4962147	34	MF975638	Streptomyces phage Abt2graduatex2, complete genome	19822-19855	9	0.735
NZ_CP009922_2	2.3|4962114|34|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT	4962114-4962147	34	NZ_CP029832	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed2, complete sequence	3546-3579	9	0.735
NZ_CP009922_2	2.3|4962114|34|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT	4962114-4962147	34	NZ_CP054621	Azospirillum oryzae strain KACC 14407 plasmid unnamed6, complete sequence	278595-278628	9	0.735
NZ_CP009922_2	2.3|4962114|34|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT	4962114-4962147	34	MT188704	Mesorhizobium phage Cp1R7A-A1, complete genome	31768-31801	9	0.735
NZ_CP009922_2	2.9|4962482|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT	4962482-4962514	33	NZ_CP034351	Streptomyces sp. W1SF4 plasmid p1, complete sequence	319232-319264	9	0.727
NZ_CP009922_2	2.14|4962787|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT	4962787-4962819	33	NC_017273	Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence	82605-82637	9	0.727
NZ_CP009922_2	2.14|4962787|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT	4962787-4962819	33	NC_017767	Thermus thermophilus HB8 plasmid pVV8, complete sequence	4581-4613	9	0.727
NZ_CP009922_2	2.14|4962787|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT	4962787-4962819	33	CP011998	Ralstonia solanacearum strain YC45 plasmid, complete sequence	302201-302233	9	0.727
NZ_CP009922_2	2.19|4963092|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT	4963092-4963124	33	NZ_LR134454	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 12, complete sequence	86255-86287	9	0.727
NZ_CP009922_3	3.3|4973477|33|NZ_CP009922|CRISPRCasFinder,CRT	4973477-4973509	33	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	4942330-4942362	9	0.727
NZ_CP009922_3	3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR	4973660-4973692	33	NC_019849	Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence	822404-822436	9	0.727
NZ_CP009922_3	3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR	4973660-4973692	33	NZ_CP025613	Niveispirillum cyanobacteriorum strain TH16 plasmid unnamed1, complete sequence	846030-846062	9	0.727
NZ_CP009922_3	3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR	4973660-4973692	33	NC_017326	Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence	807864-807896	9	0.727
NZ_CP009922_3	3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR	4973660-4973692	33	NC_017323	Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence	404305-404337	9	0.727
NZ_CP009922_3	3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR	4973660-4973692	33	NZ_CP009146	Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence	816100-816132	9	0.727
NZ_CP009922_3	3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR	4973660-4973692	33	NC_018701	Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence	805610-805642	9	0.727
NZ_CP009922_3	3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR	4973660-4973692	33	NZ_CP021802	Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence	1473816-1473848	9	0.727
NZ_CP009922_3	3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR	4973660-4973692	33	NZ_CP021820	Sinorhizobium meliloti strain M162 plasmid psymB, complete sequence	1160087-1160119	9	0.727
NZ_CP009922_3	3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR	4973660-4973692	33	NZ_CP021831	Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence	1067356-1067388	9	0.727
NZ_CP009922_3	3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR	4973660-4973692	33	NZ_CP021814	Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence	729480-729512	9	0.727
NZ_CP009922_3	3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR	4973660-4973692	33	NZ_CP021810	Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence	1594584-1594616	9	0.727
NZ_CP009922_3	3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR	4973660-4973692	33	NZ_CP021218	Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence	967222-967254	9	0.727
NZ_CP009922_3	3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR	4973660-4973692	33	NZ_CP026527	Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence	828934-828966	9	0.727
NZ_CP009922_3	3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR	4973660-4973692	33	NC_003078	Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence	915315-915347	9	0.727
NZ_CP009922_3	3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR	4973660-4973692	33	NZ_CP019586	Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence	883913-883945	9	0.727
NZ_CP009922_3	3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR	4973660-4973692	33	NZ_CP015737	Shinella sp. HZN7 plasmid pShin-01, complete sequence	618239-618271	9	0.727
NZ_CP009922_3	3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR	4973660-4973692	33	NZ_CP021799	Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence	981535-981567	9	0.727
NZ_CP009922_3	3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR	4973660-4973692	33	NZ_CP021828	Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence	485830-485862	9	0.727
NZ_CP009922_3	3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR	4973660-4973692	33	NZ_CP021823	Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence	601939-601971	9	0.727
NZ_CP009922_3	3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR	4973660-4973692	33	NZ_CP021795	Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence	121576-121608	9	0.727
NZ_CP009922_3	3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR	4973660-4973692	33	NZ_CP021806	Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence	201678-201710	9	0.727
NZ_CP009922_3	3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR	4973660-4973692	33	NZ_CP019484	Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence	1054316-1054348	9	0.727
NZ_CP009922_3	3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR	4973660-4973692	33	NC_009620	Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequence	1171541-1171573	9	0.727
NZ_CP009922_3	3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR	4973660-4973692	33	NZ_CP019487	Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence	828680-828712	9	0.727
NZ_CP009922_3	3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR	4973660-4973692	33	NC_020560	Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence	915318-915350	9	0.727
NZ_CP009922_3	3.9|4973843|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR	4973843-4973875	33	NZ_HG938354	Neorhizobium galegae bv. orientalis str. HAMBI 540 plasmid pHAMBI540a, complete sequence	1249961-1249993	9	0.727
NZ_CP009922_3	3.14|4974148|33|NZ_CP009922|CRISPRCasFinder,CRT	4974148-4974180	33	NZ_CP040822	Paraoceanicella profunda strain D4M1 plasmid pD4M1D, complete sequence	115610-115642	9	0.727
NZ_CP009922_2	2.3|4962114|34|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT	4962114-4962147	34	NZ_CP032325	Azospirillum brasilense strain MTCC4035 plasmid p4, complete sequence	585142-585175	10	0.706
NZ_CP009922_2	2.3|4962114|34|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT	4962114-4962147	34	NZ_CP007796	Azospirillum brasilense strain Az39 plasmid AbAZ39_p3, complete sequence	61406-61439	10	0.706
NZ_CP009922_2	2.3|4962114|34|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT	4962114-4962147	34	NZ_CP029357	Azospirillum sp. CFH 70021 plasmid unnamed2	567249-567282	10	0.706
NZ_CP009922_2	2.13|4962726|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT	4962726-4962758	33	NZ_CP046574	Rhodococcus sp. WAY2 plasmid pRWAY02, complete sequence	420957-420989	10	0.697
NZ_CP009922_3	3.3|4973477|33|NZ_CP009922|CRISPRCasFinder,CRT	4973477-4973509	33	MH229864	Streptomyces phage UNTPL, complete genome	5811-5843	10	0.697
NZ_CP009922_3	3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR	4973660-4973692	33	NZ_CP050104	Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b2, complete sequence	438495-438527	10	0.697
NZ_CP009922_3	3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR	4973660-4973692	33	NZ_CP025507	Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvA, complete sequence	139154-139186	10	0.697
NZ_CP009922_3	3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR	4973660-4973692	33	NZ_CP050109	Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b2, complete sequence	438495-438527	10	0.697
NZ_CP009922_3	3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR	4973660-4973692	33	NZ_CP048281	Rhizobium leguminosarum bv. viciae 248 plasmid pRle248e, complete sequence	199866-199898	10	0.697
NZ_CP009922_3	3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR	4973660-4973692	33	NZ_CP022666	Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR1, complete sequence	876927-876959	10	0.697
NZ_CP009922_3	3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR	4973660-4973692	33	NZ_CP050086	Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b7, complete sequence	474063-474095	10	0.697
NZ_CP009922_3	3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR	4973660-4973692	33	NZ_CP050081	Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b5, complete sequence	342547-342579	10	0.697
NZ_CP009922_3	3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR	4973660-4973692	33	NZ_CP049731	Rhizobium leguminosarum strain A1 plasmid pRL12, complete sequence	340584-340616	10	0.697
NZ_CP009922_3	3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR	4973660-4973692	33	NZ_CP030761	Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed1, complete sequence	123419-123451	10	0.697
NZ_CP009922_3	3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR	4973660-4973692	33	NZ_CP022565	Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK01, complete sequence	508205-508237	10	0.697
NZ_CP009922_3	3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR	4973660-4973692	33	NZ_CP053206	Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1D, complete sequence	340931-340963	10	0.697
NZ_CP009922_3	3.7|4973721|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR	4973721-4973753	33	NZ_CP033582	Streptomyces sp. ADI95-16 plasmid pADI95-16a, complete sequence	347817-347849	10	0.697
NZ_CP009922_3	3.8|4973782|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR	4973782-4973814	33	NZ_CP032923	Agrobacterium tumefaciens strain 1D1108 plasmid pAt1D1108a, complete sequence	381872-381904	10	0.697
NZ_CP009922_3	3.13|4974087|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR	4974087-4974119	33	NC_011892	Methylobacterium nodulans ORS 2060 plasmid pMNOD01, complete sequence	163493-163525	10	0.697
NZ_CP009922_2	2.18|4963031|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT	4963031-4963063	33	NZ_CP043044	Gluconobacter thailandicus strain HD924 plasmid unnamed1, complete sequence	47411-47443	11	0.667
NZ_CP009922_3	3.3|4973477|33|NZ_CP009922|CRISPRCasFinder,CRT	4973477-4973509	33	NZ_CP047053	Clavibacter michiganensis subsp. michiganensis strain MSF322 plasmid pMSF1, complete sequence	8322-8354	15	0.545
NZ_CP009922_3	3.3|4973477|33|NZ_CP009922|CRISPRCasFinder,CRT	4973477-4973509	33	NZ_CP011808	Pandoraea faecigallinarum strain DSM 23572 plasmid pPF72-1, complete sequence	137730-137762	17	0.485

1. spacer 3.13|4974087|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR matches to KY092484 (Streptomyces phage Raleigh, complete genome) position: , mismatch: 4, identity: 0.879

gcgccatgatcgcggggtcgagaccgacctcac	CRISPR spacer
gggccataatcgcggggtcgaggccgacctcgc	Protospacer
* *****.**************.********.*

2. spacer 3.9|4973843|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP046573 (Rhodococcus sp. WAY2 plasmid pRWAY01, complete sequence) position: , mismatch: 5, identity: 0.848

cgagaccgcccccggcatcacgctcgcccggct-	CRISPR spacer
cgagaccgccaccggcatcgcgct-gcccgacgg	Protospacer
********** ********.**** *****.*  

3. spacer 3.3|4973477|33|NZ_CP009922|CRISPRCasFinder,CRT matches to NZ_CP015881 (Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence) position: , mismatch: 6, identity: 0.818

gcggcggccggcggcgcgcacgtgcgcacctgc	CRISPR spacer
gaggccgccggcggcgcgcacatgcgcataggc	Protospacer
* *** ***************.******.  **

4. spacer 3.3|4973477|33|NZ_CP009922|CRISPRCasFinder,CRT matches to NZ_CP030263 (Ensifer adhaerens strain Corn53 plasmid AA, complete sequence) position: , mismatch: 6, identity: 0.818

gcggcggccggcggcgcgcacgtgcgcacctgc	CRISPR spacer
gaggccgccggcggcgcgcacatgcgcataggc	Protospacer
* *** ***************.******.  **

5. spacer 2.2|4962053|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027859 (Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence) position: , mismatch: 7, identity: 0.788

taccagctgccgctggaggtgatctgccacctc	CRISPR spacer
ttgcccctgccgctggaggtgatctgcgaactg	Protospacer
*  *  ********************* * ** 

6. spacer 2.2|4962053|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT matches to NC_013855 (Azospirillum sp. B510 plasmid pAB510a, complete sequence) position: , mismatch: 7, identity: 0.788

taccagctgccgctggaggtgatctgccacctc	CRISPR spacer
aaccagctgccgctgggggtgatcggcatcgcc	Protospacer
 ***************.******* **  * .*

7. spacer 2.2|4962053|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032054 (Streptomyces clavuligerus strain F1D-5 plasmid pSCL1, complete sequence) position: , mismatch: 7, identity: 0.788

taccagctgccgctggaggtgatctgccacctc	CRISPR spacer
ttgcccctgccgctggaggtgatctgcgaactg	Protospacer
*  *  ********************* * ** 

8. spacer 2.2|4962053|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054621 (Azospirillum oryzae strain KACC 14407 plasmid unnamed6, complete sequence) position: , mismatch: 7, identity: 0.788

taccagctgccgctggaggtgatctgccacctc	CRISPR spacer
aaccagctgccgctgggggtgatcggcatcgcc	Protospacer
 ***************.******* **  * .*

9. spacer 2.2|4962053|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016560 (Streptomyces clavuligerus strain F613-1 plasmid pSCL4, complete sequence) position: , mismatch: 7, identity: 0.788

taccagctgccgctggaggtgatctgccacctc	CRISPR spacer
ttgcccctgccgctggaggtgatctgcgaactg	Protospacer
*  *  ********************* * ** 

10. spacer 2.2|4962053|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT matches to NC_016585 (Azospirillum lipoferum 4B plasmid AZO_p1, complete sequence) position: , mismatch: 7, identity: 0.788

taccagctgccgctggaggtgatctgccacctc	CRISPR spacer
aaccagctgccgctgggggtgatcggcatcgcc	Protospacer
 ***************.******* **  * .*

11. spacer 2.3|4962114|34|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014706 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_2p, complete sequence) position: , mismatch: 7, identity: 0.794

tcgggtccacccgctccgcctcgcgccgcagggc	CRISPR spacer
tccgcagcaccggctccgccttgcgccgcaggcc	Protospacer
** *   **** *********.********** *

12. spacer 2.10|4962543|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030864 (Streptomyces globosus strain LZH-48 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.788

cgcgacaacagcggcagctgcaacggggccgac	CRISPR spacer
ggccccgacagcggcagcggcaacgggaccggc	Protospacer
 **  *.*********** ********.***.*

13. spacer 2.13|4962726|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029833 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.788

ccagcggcgggggagcggttcggcgaggagcga-	CRISPR spacer
ccggcggcggcggagcggttcggc-cgctgcgcc	Protospacer
**.******* *************  *  ***  

14. spacer 2.14|4962787|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016613 (Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.788

gaggcggcgcaccgccgccaggtgctcggagag	CRISPR spacer
ccggcggcgcaccgccgccatgcgctcgagggg	Protospacer
  ****************** *.*****..*.*

15. spacer 2.14|4962787|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT matches to NC_023283 (Streptomyces sp. FR1 plasmid pFRL3, complete sequence) position: , mismatch: 7, identity: 0.788

gaggcggcgcaccgccgccaggtgctcggagag	CRISPR spacer
ccggcggcgcaccgccgccacgtgctacgcgac	Protospacer
  ****************** *****  * ** 

16. spacer 2.14|4962787|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT matches to NC_023284 (Streptomyces sp. F2 plasmid pFRL4, complete sequence) position: , mismatch: 7, identity: 0.788

gaggcggcgcaccgccgccaggtgctcggagag	CRISPR spacer
ccggcggcgcaccgccgccacgtgctacgcgac	Protospacer
  ****************** *****  * ** 

17. spacer 2.14|4962787|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT matches to CP054917 (Streptomyces sp. NA02950 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.788

gaggcggcgcaccgccgccaggtgctcggagag	CRISPR spacer
ctcgcggcgcaccgccgccaggtcgtcggggtg	Protospacer
   ********************  ****.* *

18. spacer 2.14|4962787|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039340 (Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence) position: , mismatch: 7, identity: 0.788

gaggcggcgcaccgccgccaggtgctcggagag	CRISPR spacer
gtggcggcgcaacgccgccaggtggtcgtcggt	Protospacer
* ********* ************ ***  *. 

19. spacer 2.14|4962787|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016555 (Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence) position: , mismatch: 7, identity: 0.788

gaggcggcgcaccgccgccaggtgctcggagag	CRISPR spacer
ccggcggcgcaccgccgccatgcgctcgagggg	Protospacer
  ****************** *.*****..*.*

20. spacer 2.14|4962787|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052069 (Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.788

gaggcggcgcaccgccgccaggtgctcggagag	CRISPR spacer
ccggcggcgcaccgccgccatgcgctcgagggg	Protospacer
  ****************** *.*****..*.*

21. spacer 2.14|4962787|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052071 (Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.788

gaggcggcgcaccgccgccaggtgctcggagag	CRISPR spacer
ccggcggcgcaccgccgccatgcgctcgagggg	Protospacer
  ****************** *.*****..*.*

22. spacer 2.14|4962787|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052075 (Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.788

gaggcggcgcaccgccgccaggtgctcggagag	CRISPR spacer
ccggcggcgcaccgccgccatgcgctcgagggg	Protospacer
  ****************** *.*****..*.*

23. spacer 2.14|4962787|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052095 (Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.788

gaggcggcgcaccgccgccaggtgctcggagag	CRISPR spacer
ccggcggcgcaccgccgccatgcgctcgagggg	Protospacer
  ****************** *.*****..*.*

24. spacer 2.14|4962787|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052105 (Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.788

gaggcggcgcaccgccgccaggtgctcggagag	CRISPR spacer
ccggcggcgcaccgccgccatgcgctcgagggg	Protospacer
  ****************** *.*****..*.*

25. spacer 2.14|4962787|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052097 (Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.788

gaggcggcgcaccgccgccaggtgctcggagag	CRISPR spacer
ccggcggcgcaccgccgccatgcgctcgagggg	Protospacer
  ****************** *.*****..*.*

26. spacer 2.14|4962787|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052115 (Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.788

gaggcggcgcaccgccgccaggtgctcggagag	CRISPR spacer
ccggcggcgcaccgccgccatgcgctcgagggg	Protospacer
  ****************** *.*****..*.*

27. spacer 2.14|4962787|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052093 (Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.788

gaggcggcgcaccgccgccaggtgctcggagag	CRISPR spacer
ccggcggcgcaccgccgccatgcgctcgagggg	Protospacer
  ****************** *.*****..*.*

28. spacer 2.14|4962787|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052101 (Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.788

gaggcggcgcaccgccgccaggtgctcggagag	CRISPR spacer
ccggcggcgcaccgccgccatgcgctcgagggg	Protospacer
  ****************** *.*****..*.*

29. spacer 2.14|4962787|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052099 (Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.788

gaggcggcgcaccgccgccaggtgctcggagag	CRISPR spacer
ccggcggcgcaccgccgccatgcgctcgagggg	Protospacer
  ****************** *.*****..*.*

30. spacer 2.14|4962787|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052107 (Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.788

gaggcggcgcaccgccgccaggtgctcggagag	CRISPR spacer
ccggcggcgcaccgccgccatgcgctcgagggg	Protospacer
  ****************** *.*****..*.*

31. spacer 2.14|4962787|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052117 (Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.788

gaggcggcgcaccgccgccaggtgctcggagag	CRISPR spacer
ccggcggcgcaccgccgccatgcgctcgagggg	Protospacer
  ****************** *.*****..*.*

32. spacer 2.14|4962787|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052129 (Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.788

gaggcggcgcaccgccgccaggtgctcggagag	CRISPR spacer
ccggcggcgcaccgccgccatgcgctcgagggg	Protospacer
  ****************** *.*****..*.*

33. spacer 2.14|4962787|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052121 (Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.788

gaggcggcgcaccgccgccaggtgctcggagag	CRISPR spacer
ccggcggcgcaccgccgccatgcgctcgagggg	Protospacer
  ****************** *.*****..*.*

34. spacer 2.14|4962787|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052073 (Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.788

gaggcggcgcaccgccgccaggtgctcggagag	CRISPR spacer
ccggcggcgcaccgccgccatgcgctcgagggg	Protospacer
  ****************** *.*****..*.*

35. spacer 2.14|4962787|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052109 (Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.788

gaggcggcgcaccgccgccaggtgctcggagag	CRISPR spacer
ccggcggcgcaccgccgccatgcgctcgagggg	Protospacer
  ****************** *.*****..*.*

36. spacer 2.14|4962787|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052091 (Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.788

gaggcggcgcaccgccgccaggtgctcggagag	CRISPR spacer
ccggcggcgcaccgccgccatgcgctcgagggg	Protospacer
  ****************** *.*****..*.*

37. spacer 2.14|4962787|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052103 (Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.788

gaggcggcgcaccgccgccaggtgctcggagag	CRISPR spacer
ccggcggcgcaccgccgccatgcgctcgagggg	Protospacer
  ****************** *.*****..*.*

38. spacer 2.14|4962787|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052119 (Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.788

gaggcggcgcaccgccgccaggtgctcggagag	CRISPR spacer
ccggcggcgcaccgccgccatgcgctcgagggg	Protospacer
  ****************** *.*****..*.*

39. spacer 2.15|4962848|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT matches to ASHF01000034 (Streptomyces sp. GBA 94-10 plasmid pGBA1, complete sequence, whole genome shotgun sequence) position: , mismatch: 7, identity: 0.788

aaccacgtctcggcgcacgtcttgtggcagggc	CRISPR spacer
ttccaggtctcggcgcaggtcttgtggacggac	Protospacer
  *** *********** *********  **.*

40. spacer 3.3|4973477|33|NZ_CP009922|CRISPRCasFinder,CRT matches to NC_014309 (Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome) position: , mismatch: 7, identity: 0.788

gcggcggccggcggcgcgcacgtgcgcacctgc	CRISPR spacer
gaggcggccgccggcgcgcacgagcgcgtccgt	Protospacer
* ******** *********** ****..*.*.

41. spacer 3.3|4973477|33|NZ_CP009922|CRISPRCasFinder,CRT matches to NZ_CP013381 (Burkholderia sp. Bp5365 strain MSMB43 plasmid pMSMB43, complete sequence) position: , mismatch: 7, identity: 0.788

gcggcggccggcggcgcgcacgtgc---gcacctgc	CRISPR spacer
ccgtcgcccggcggcgcgcacgtgctgtgcatc---	Protospacer
 ** ** ******************   ***.*   

42. spacer 3.3|4973477|33|NZ_CP009922|CRISPRCasFinder,CRT matches to NZ_CP009547 (Burkholderia sp. 2002721687 plasmid pBTU, complete sequence) position: , mismatch: 7, identity: 0.788

gcggcggccggcggcgcgcacgtgc---gcacctgc	CRISPR spacer
ccgtcgcccggcggcgcgcacgtgctgtgcatc---	Protospacer
 ** ** ******************   ***.*   

43. spacer 3.5|4973599|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP011044 (Clavibacter michiganensis subsp. insidiosus strain R1-1 plasmid pCI1, complete sequence) position: , mismatch: 7, identity: 0.788

cacgggctgtccggcgcccgcgcgtgggcgtgg	CRISPR spacer
cacggggtgtccggcgcccgtgcgtcgcggccg	Protospacer
****** *************.**** *  *. *

44. spacer 3.5|4973599|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021035 (Clavibacter michiganensis subsp. insidiosus strain R1-3 plasmid pCI1, complete sequence) position: , mismatch: 7, identity: 0.788

cacgggctgtccggcgcccgcgcgtgggcgtgg	CRISPR spacer
cacggggtgtccggcgcccgtgcgtcgcggccg	Protospacer
****** *************.**** *  *. *

45. spacer 3.5|4973599|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021039 (Clavibacter michiganensis subsp. insidiosus strain ATCC 10253 plasmid pCI1, complete sequence) position: , mismatch: 7, identity: 0.788

cacgggctgtccggcgcccgcgcgtgggcgtgg	CRISPR spacer
cacggggtgtccggcgcccgtgcgtcgcggccg	Protospacer
****** *************.**** *  *. *

46. spacer 3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP003988 (Streptomyces sp. 769 plasmid pSGZL, complete sequence) position: , mismatch: 7, identity: 0.788

cgtcggcatcgccaccggcccggcgaacctggt	CRISPR spacer
actcggcatcgccaacgggccggcgaacttcga	Protospacer
  ************ *** *********.* * 

47. spacer 3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019465 (Streptomyces autolyticus strain CGMCC0516 plasmid unnamed8, complete sequence) position: , mismatch: 7, identity: 0.788

cgtcggcatcgccaccggcccggcgaacctggt	CRISPR spacer
cgtcggcttcgcctccggcccggccttcccggg	Protospacer
******* ***** **********   **.** 

48. spacer 2.2|4962053|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022607 (Mycobacterium branderi strain JCM 12687 plasmid pJCM12687) position: , mismatch: 8, identity: 0.758

taccagctgccgctggaggtgatctgccacctc	CRISPR spacer
gggccgctgccgctgcaggtgatctgcgacatg	Protospacer
 . * ********** *********** ** * 

49. spacer 2.3|4962114|34|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032325 (Azospirillum brasilense strain MTCC4035 plasmid p4, complete sequence) position: , mismatch: 8, identity: 0.765

tcgggtccacccgctccgcctcgcgccgcagggc	CRISPR spacer
ccgtctccagcccctccgcctcgcgccgcccggt	Protospacer
.**  **** ** ****************  **.

50. spacer 2.3|4962114|34|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032349 (Azospirillum brasilense strain MTCC4039 plasmid p3, complete sequence) position: , mismatch: 8, identity: 0.765

tcgggtccacccgctccgcctcgcgccgcagggc	CRISPR spacer
ccgtctccagcccctccgcctcgcgccgcccggt	Protospacer
.**  **** ** ****************  **.

51. spacer 2.3|4962114|34|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022369 (Azospirillum sp. TSH58 plasmid TSH58_p05, complete sequence) position: , mismatch: 8, identity: 0.765

tcgggtccacccgctccgcctcgcgccgcagggc	CRISPR spacer
ccgtttccagcccctccgcctcgcgccgcccggt	Protospacer
.**  **** ** ****************  **.

52. spacer 2.3|4962114|34|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022369 (Azospirillum sp. TSH58 plasmid TSH58_p05, complete sequence) position: , mismatch: 8, identity: 0.765

tcgggtccacccgctccgcctcgcgccgcagggc	CRISPR spacer
ccgtttccagcccctccgcctcgcgccgcccggt	Protospacer
.**  **** ** ****************  **.

53. spacer 2.3|4962114|34|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT matches to NC_016587 (Azospirillum lipoferum 4B plasmid AZO_p4, complete sequence) position: , mismatch: 8, identity: 0.765

tcgggtccacccgctccgcctcgcgccgcagggc	CRISPR spacer
cccgttcgcgccgccccgcctcgcgcagcagggc	Protospacer
.* * **   ****.*********** *******

54. spacer 2.3|4962114|34|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032342 (Azospirillum brasilense strain MTCC4038 plasmid p3, complete sequence) position: , mismatch: 8, identity: 0.765

tcgggtccacccgctccgcctcgcgccgcagggc	CRISPR spacer
ccgtctccagcccctccgcctcgcgccgcccggt	Protospacer
.**  **** ** ****************  **.

55. spacer 2.3|4962114|34|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033321 (Azospirillum brasilense strain Cd plasmid p3, complete sequence) position: , mismatch: 8, identity: 0.765

tcgggtccacccgctccgcctcgcgccgcagggc	CRISPR spacer
ccgtctccagcccctccgcctcgcgccgcccggt	Protospacer
.**  **** ** ****************  **.

56. spacer 2.3|4962114|34|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033323 (Azospirillum brasilense strain Cd plasmid p5, complete sequence) position: , mismatch: 8, identity: 0.765

tcgggtccacccgctccgcctcgcgccgcagggc	CRISPR spacer
ccgtctccagcccctccgcctcgcgccgcccggt	Protospacer
.**  **** ** ****************  **.

57. spacer 2.3|4962114|34|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033315 (Azospirillum brasilense strain Sp 7 plasmid p3, complete sequence) position: , mismatch: 8, identity: 0.765

tcgggtccacccgctccgcctcgcgccgcagggc	CRISPR spacer
ccgtctccagcccctccgcctcgcgccgcccggt	Protospacer
.**  **** ** ****************  **.

58. spacer 2.3|4962114|34|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033317 (Azospirillum brasilense strain Sp 7 plasmid p5, complete sequence) position: , mismatch: 8, identity: 0.765

tcgggtccacccgctccgcctcgcgccgcagggc	CRISPR spacer
ccgtctccagcccctccgcctcgcgccgcccggt	Protospacer
.**  **** ** ****************  **.

59. spacer 2.10|4962543|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025513 (Neorhizobium sp. SOG26 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.758

cgcgacaacagcggcagctgcaacggggccgac	CRISPR spacer
ggcgacaactgcggcagccgcaacggccgcggt	Protospacer
 ******** ********.*******   **..

60. spacer 2.13|4962726|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034352 (Streptomyces sp. W1SF4 plasmid p2, complete sequence) position: , mismatch: 8, identity: 0.758

ccagcggcgggggagcggttcggcgaggagcga	CRISPR spacer
cactcggcgtgggagcagttcggcgaggacggc	Protospacer
*   ***** ******.************  * 

61. spacer 2.13|4962726|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045548 (Streptomyces sp. SYP-A7193 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.758

ccagcggcgggggagcggttcggcgaggagcga	CRISPR spacer
cagggcgcgggggagcggttcggcgcgcagggc	Protospacer
* .*  ******************* * ** * 

62. spacer 2.13|4962726|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT matches to MK875798 (Microbacterium phage Piperis, complete genome) position: , mismatch: 8, identity: 0.758

ccagcggcgggggagcggttcggcgaggagcga	CRISPR spacer
ggagcggcgggggagcggcccggcgactgggga	Protospacer
  ****************..******  .* **

63. spacer 2.13|4962726|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT matches to MT818415 (Microbacterium phage Scumberland, complete genome) position: , mismatch: 8, identity: 0.758

ccagcggcgggggagcggttcggcgaggagcga	CRISPR spacer
ggagcggcgggggagcggcccggcgactgggga	Protospacer
  ****************..******  .* **

64. spacer 2.13|4962726|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT matches to NC_047993 (Microbacterium phage Quhwah, complete genome) position: , mismatch: 8, identity: 0.758

ccagcggcgggggagcggttcggcgaggagcga	CRISPR spacer
ggagcggcgggggagcggcccggcgactgggga	Protospacer
  ****************..******  .* **

65. spacer 2.13|4962726|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT matches to MN062719 (Microbacterium phage PiperSansNom, complete genome) position: , mismatch: 8, identity: 0.758

ccagcggcgggggagcggttcggcgaggagcga	CRISPR spacer
ggagcggcgggggagcggcccggcgactgggga	Protospacer
  ****************..******  .* **

66. spacer 2.13|4962726|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT matches to MN444877 (Microbacterium phage Antares, complete genome) position: , mismatch: 8, identity: 0.758

ccagcggcgggggagcggttcggcgaggagcga	CRISPR spacer
ggagcggcgggggagcggcccggcgactgggga	Protospacer
  ****************..******  .* **

67. spacer 2.14|4962787|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026091 (Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

gaggcggcgcaccgccgccaggtgctcggagag	CRISPR spacer
ctggcggggcaccgccgccaggcgctgtggcag	Protospacer
  ***** **************.***  *. **

68. spacer 2.14|4962787|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026093 (Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

gaggcggcgcaccgccgccaggtgctcggagag	CRISPR spacer
ctggcggggcaccgccgccaggcgctgtggcag	Protospacer
  ***** **************.***  *. **

69. spacer 2.19|4963092|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP006368 (Aureimonas sp. AU20 plasmid pAU20a, complete sequence) position: , mismatch: 8, identity: 0.758

cgctgtccgcgaccgaccccggctggatatcca	CRISPR spacer
cgctggccgcgatcgaccccggctggaacaagg	Protospacer
***** ******.**************     .

70. spacer 3.3|4973477|33|NZ_CP009922|CRISPRCasFinder,CRT matches to NZ_CP010016 (Burkholderia thailandensis 34 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

gcggcggccggcggcgcgcacgtgcgcacctgc	CRISPR spacer
gcggcgggcggcgccgcgcacgtggtctcgctc	Protospacer
******* ***** **********  * * . *

71. spacer 3.3|4973477|33|NZ_CP009922|CRISPRCasFinder,CRT matches to NZ_CP034186 (Deinococcus sp. S14-83 strain S14-83T plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.758

gcggcggccggcggcgcgcacgtgcgcacctgc---	CRISPR spacer
gcggcggccagcggcgcacacgtgt---tgtgcgaa	Protospacer
*********.*******.******.   . ***   

72. spacer 3.4|4973538|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR matches to NC_013855 (Azospirillum sp. B510 plasmid pAB510a, complete sequence) position: , mismatch: 8, identity: 0.758

ccggtgagcggccgggacgccggcttcctcttc	CRISPR spacer
gaggtgatcggccgggacggcggcttcctgcat	Protospacer
  ***** *********** ********* . .

73. spacer 3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023408 (Streptomyces fungicidicus strain TXX3120 plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.758

cgtcggcatcgccaccggcccggcgaacctggt	CRISPR spacer
ggtcggcatcgtcaccggccccgcgcccgccgt	Protospacer
 **********.********* ***  * . **

74. spacer 3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029358 (Azospirillum sp. CFH 70021 plasmid unnamed3) position: , mismatch: 8, identity: 0.758

cgtcggcatcgccaccggcccggcgaacctggt	CRISPR spacer
cagcgccatcgccaccagcccggcgaaggcgct	Protospacer
*. ** **********.**********  .* *

75. spacer 3.7|4973721|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026517 (Deinococcus sp. NW-56 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.758

gacgacgccgcccagccggacggagccacggac	CRISPR spacer
gttcaggccgcgcagccggaaggagccacggca	Protospacer
* . * ***** ******** **********  

76. spacer 3.7|4973721|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP048816 (Caulobacter rhizosphaerae strain KCTC 52515 plasmid unnamed) position: , mismatch: 8, identity: 0.758

gacgacgccgcccagccggacggagccacggac	CRISPR spacer
gccgccgccgcccagccggacggcgcgatacat	Protospacer
* ** ****************** ** *.. *.

77. spacer 3.9|4973843|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017563 (Paraburkholderia sprentiae WSM5005 plasmid pl1WSM5005, complete sequence) position: , mismatch: 8, identity: 0.758

cgagaccgcccccggcatcacgctcgcccggct	CRISPR spacer
cctgagcgccgccggcatcacgctcgcggagat	Protospacer
*  ** **** ****************  .* *

78. spacer 3.10|4973904|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 8, identity: 0.758

ccagtcgggggcgtcggcggtgcccatgttgca	CRISPR spacer
ccagtcgggggcgtcggcggcgccctgggactt	Protospacer
********************.****  *   . 

79. spacer 3.10|4973904|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 8, identity: 0.758

ccagtcgggggcgtcggcggtgcccatgttgca	CRISPR spacer
ccagtcgggggcgtcggcggcgccctgggactt	Protospacer
********************.****  *   . 

80. spacer 3.10|4973904|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050118 (Deinococcus radiodurans strain BNK-50 plasmid pMP1, complete sequence) position: , mismatch: 8, identity: 0.758

ccagtcg--ggggcgtcggcggtgcccatgttgca	CRISPR spacer
--gggcgtcagggcgtcggcggtgcccacgctgcc	Protospacer
  .* **  .******************.*.*** 

81. spacer 3.10|4973904|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050122 (Deinococcus radiodurans strain BND-54 plasmid pMP1, complete sequence) position: , mismatch: 8, identity: 0.758

ccagtcg--ggggcgtcggcggtgcccatgttgca	CRISPR spacer
--gggcgtcagggcgtcggcggtgcccacgctgcc	Protospacer
  .* **  .******************.*.*** 

82. spacer 3.10|4973904|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031502 (Deinococcus radiodurans strain R1 dM1 plasmid pMP1, complete sequence) position: , mismatch: 8, identity: 0.758

ccagtcg--ggggcgtcggcggtgcccatgttgca	CRISPR spacer
--gggcgtcagggcgtcggcggtgcccacgctgcc	Protospacer
  .* **  .******************.*.*** 

83. spacer 3.10|4973904|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR matches to NC_010510 (Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, complete sequence) position: , mismatch: 8, identity: 0.758

ccagtcgggggcgtcggcggtgcccatgttgca-	CRISPR spacer
cccgtcgggggcgtcgtcggtg-ccgcgctccgg	Protospacer
** ************* ***** **..*.* *. 

84. spacer 3.10|4973904|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR matches to NC_000958 (Deinococcus radiodurans R1 plasmid MP1, complete sequence) position: , mismatch: 8, identity: 0.758

ccagtcg--ggggcgtcggcggtgcccatgttgca	CRISPR spacer
--gggcgtcagggcgtcggcggtgcccacgctgcc	Protospacer
  .* **  .******************.*.*** 

85. spacer 3.10|4973904|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020332 (Martelella mediterranea DSM 17316 strain MACL11 plasmid pMM259, complete sequence) position: , mismatch: 8, identity: 0.758

ccagtcg--ggggcgtcggcggtgcccatgttgca	CRISPR spacer
--gatcgttggagcgtcggcggtgtccatgttggg	Protospacer
  ..***  **.************.******** .

86. spacer 3.13|4974087|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054621 (Azospirillum oryzae strain KACC 14407 plasmid unnamed6, complete sequence) position: , mismatch: 8, identity: 0.758

gcgccatgatcgcggggtcgagaccgacctcac	CRISPR spacer
tcccgtaggtcgctgggtcgagaccgatctcac	Protospacer
 * *   *.**** *************.*****

87. spacer 3.14|4974148|33|NZ_CP009922|CRISPRCasFinder,CRT matches to NZ_CP040822 (Paraoceanicella profunda strain D4M1 plasmid pD4M1D, complete sequence) position: , mismatch: 8, identity: 0.758

gcacgacgggggcccgatgcctcccgaggctcc	CRISPR spacer
gccgagcgggggctcgatgccccccgaggcgct	Protospacer
**  ..*******.*******.******** *.

88. spacer 3.14|4974148|33|NZ_CP009922|CRISPRCasFinder,CRT matches to NZ_CP015441 (Erythrobacter atlanticus strain s21-N3 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

gcacgacgggggcccgatgcctcccgaggctcc	CRISPR spacer
gggcgacgggggctcgatgccacccgagcccgt	Protospacer
* .**********.******* ****** *. .

89. spacer 3.14|4974148|33|NZ_CP009922|CRISPRCasFinder,CRT matches to NZ_CP040819 (Paraoceanicella profunda strain D4M1 plasmid pD4M1A, complete sequence) position: , mismatch: 8, identity: 0.758

gcacgacgggggcccgatgcctcccgaggctcc	CRISPR spacer
gccgagcgggggctcgatgccccccgaggcgct	Protospacer
**  ..*******.*******.******** *.

90. spacer 2.2|4962053|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026519 (Deinococcus sp. NW-56 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.727

taccagctgccgctggaggtgatctgccacctc	CRISPR spacer
gcgcccctgccgctggaggtgatcggcgacgcc	Protospacer
   *  ****************** ** ** .*

91. spacer 2.3|4962114|34|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT matches to MF975638 (Streptomyces phage Abt2graduatex2, complete genome) position: , mismatch: 9, identity: 0.735

tcgggtccacccgctccgcctcgcgccgcagggc	CRISPR spacer
gctcggccacccgctcggccttgcgccgcagcag	Protospacer
 *  * ********** ****.********* . 

92. spacer 2.3|4962114|34|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029832 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.735

tcgggtccacccgctccgcctcgcgccgcagggc	CRISPR spacer
cgaggatcaccggctccgccccgcgccgcagccc	Protospacer
. .** .**** ********.**********  *

93. spacer 2.3|4962114|34|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054621 (Azospirillum oryzae strain KACC 14407 plasmid unnamed6, complete sequence) position: , mismatch: 9, identity: 0.735

tcgggtccacccgctccgcctcgcgccgcagggc	CRISPR spacer
ccgccagcacctgctccgcctcccgccgcagatc	Protospacer
.**    ****.********** ********. *

94. spacer 2.3|4962114|34|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT matches to MT188704 (Mesorhizobium phage Cp1R7A-A1, complete genome) position: , mismatch: 9, identity: 0.735

--tcgggtccacccgctccgcctcgcgccgcagggc	CRISPR spacer
ggccagatt--cccgcttcgcctcgcgccgctgggg	Protospacer
  .*.*.*.  ******.************* *** 

95. spacer 2.9|4962482|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034351 (Streptomyces sp. W1SF4 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.727

gagcgagagccgatggacgacgcgctacgcacg	CRISPR spacer
ctgcgcgacccgatggacgacgcgctgaccgca	Protospacer
  *** ** *****************.  *.*.

96. spacer 2.14|4962787|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 9, identity: 0.727

gaggcggcgcaccgccgccaggtgctcggagag	CRISPR spacer
ctggcggcgcacctcctccaggtgctcccggct	Protospacer
  *********** ** **********  .*  

97. spacer 2.14|4962787|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT matches to NC_017767 (Thermus thermophilus HB8 plasmid pVV8, complete sequence) position: , mismatch: 9, identity: 0.727

gaggcggcgcaccgccgccaggtgctcggagag	CRISPR spacer
ctggcggcgcacctcctccaggtgctcccggct	Protospacer
  *********** ** **********  .*  

98. spacer 2.14|4962787|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT matches to CP011998 (Ralstonia solanacearum strain YC45 plasmid, complete sequence) position: , mismatch: 9, identity: 0.727

gaggcggcgcaccgccgccaggtgctcggagag	CRISPR spacer
cacccggcgcaccgccgccgggtgcccgccggc	Protospacer
 *  ***************.*****.**  *. 

99. spacer 2.19|4963092|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR134454 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 12, complete sequence) position: , mismatch: 9, identity: 0.727

cgctgtccgcgaccgaccccggctggatatcca	CRISPR spacer
cgctgcccgcgaccgcccccggctcggccacgg	Protospacer
*****.********* ******** *..  * .

100. spacer 3.3|4973477|33|NZ_CP009922|CRISPRCasFinder,CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 9, identity: 0.727

gcggcggccggcggcgcgcacgtgcgcacctgc	CRISPR spacer
gggctgggcggcgacgcgcacgtgcgcacggcg	Protospacer
* * .** *****.***************    

101. spacer 3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR matches to NC_019849 (Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence) position: , mismatch: 9, identity: 0.727

cgtcggcatcgccaccggcccggcgaacctggt	CRISPR spacer
tctcggcatcgcgaccggcacggcgatcggcgg	Protospacer
. ********** ****** ****** *   * 

102. spacer 3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025613 (Niveispirillum cyanobacteriorum strain TH16 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.727

cgtcggcatcgccaccggcccggcgaacctggt	CRISPR spacer
tgtcggcatcaccaccggcctggcgcaggtcaa	Protospacer
.*********.*********.**** *  * . 

103. spacer 3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR matches to NC_017326 (Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence) position: , mismatch: 9, identity: 0.727

cgtcggcatcgccaccggcccggcgaacctggt	CRISPR spacer
tctcggcatcgcgaccggcacggcgatcggcgg	Protospacer
. ********** ****** ****** *   * 

104. spacer 3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR matches to NC_017323 (Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence) position: , mismatch: 9, identity: 0.727

cgtcggcatcgccaccggcccggcgaacctggt	CRISPR spacer
tctcggcatcgcgaccggcacggcgatcggcgg	Protospacer
. ********** ****** ****** *   * 

105. spacer 3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009146 (Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence) position: , mismatch: 9, identity: 0.727

cgtcggcatcgccaccggcccggcgaacctggt	CRISPR spacer
tctcggcatcgcgaccggcacggcgatcggcgg	Protospacer
. ********** ****** ****** *   * 

106. spacer 3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR matches to NC_018701 (Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence) position: , mismatch: 9, identity: 0.727

cgtcggcatcgccaccggcccggcgaacctggt	CRISPR spacer
tctcggcatcgcgaccggcacggcgatcggcgg	Protospacer
. ********** ****** ****** *   * 

107. spacer 3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021802 (Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence) position: , mismatch: 9, identity: 0.727

cgtcggcatcgccaccggcccggcgaacctggt	CRISPR spacer
tctcggcatcgcgaccggcacggcgatcggcgg	Protospacer
. ********** ****** ****** *   * 

108. spacer 3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021820 (Sinorhizobium meliloti strain M162 plasmid psymB, complete sequence) position: , mismatch: 9, identity: 0.727

cgtcggcatcgccaccggcccggcgaacctggt	CRISPR spacer
tctcggcatcgcgaccggcacggcgatcggcgg	Protospacer
. ********** ****** ****** *   * 

109. spacer 3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021831 (Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence) position: , mismatch: 9, identity: 0.727

cgtcggcatcgccaccggcccggcgaacctggt	CRISPR spacer
tctcggcatcgcgaccggcacggcgatcggcgg	Protospacer
. ********** ****** ****** *   * 

110. spacer 3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021814 (Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence) position: , mismatch: 9, identity: 0.727

cgtcggcatcgccaccggcccggcgaacctggt	CRISPR spacer
tctcggcatcgcgaccggcacggcgatcggcgg	Protospacer
. ********** ****** ****** *   * 

111. spacer 3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021810 (Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence) position: , mismatch: 9, identity: 0.727

cgtcggcatcgccaccggcccggcgaacctggt	CRISPR spacer
tctcggcatcgcgaccggcacggcgatcggcgg	Protospacer
. ********** ****** ****** *   * 

112. spacer 3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021218 (Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence) position: , mismatch: 9, identity: 0.727

cgtcggcatcgccaccggcccggcgaacctggt	CRISPR spacer
tctcggcatcgcgaccggcacggcgatcggcgg	Protospacer
. ********** ****** ****** *   * 

113. spacer 3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026527 (Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence) position: , mismatch: 9, identity: 0.727

cgtcggcatcgccaccggcccggcgaacctggt	CRISPR spacer
tctcggcatcgcgaccggcacggcgatcggcgg	Protospacer
. ********** ****** ****** *   * 

114. spacer 3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR matches to NC_003078 (Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence) position: , mismatch: 9, identity: 0.727

cgtcggcatcgccaccggcccggcgaacctggt	CRISPR spacer
tctcggcatcgcgaccggcacggcgatcggcgg	Protospacer
. ********** ****** ****** *   * 

115. spacer 3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019586 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence) position: , mismatch: 9, identity: 0.727

cgtcggcatcgccaccggcccggcgaacctggt	CRISPR spacer
tctcggcatcgcgaccggcacggcgatcggcgg	Protospacer
. ********** ****** ****** *   * 

116. spacer 3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015737 (Shinella sp. HZN7 plasmid pShin-01, complete sequence) position: , mismatch: 9, identity: 0.727

cgtcggcatcgccaccggcccggcgaacctggt	CRISPR spacer
cgtcggaatagccaccggcccggcccatggcgg	Protospacer
****** ** **************  *.   * 

117. spacer 3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021799 (Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence) position: , mismatch: 9, identity: 0.727

cgtcggcatcgccaccggcccggcgaacctggt	CRISPR spacer
tctcggcatcgcgaccggcacggcgatcggcgg	Protospacer
. ********** ****** ****** *   * 

118. spacer 3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021828 (Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence) position: , mismatch: 9, identity: 0.727

cgtcggcatcgccaccggcccggcgaacctggt	CRISPR spacer
tctcggcatcgcgaccggcacggcgatcggcgg	Protospacer
. ********** ****** ****** *   * 

119. spacer 3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021823 (Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence) position: , mismatch: 9, identity: 0.727

cgtcggcatcgccaccggcccggcgaacctggt	CRISPR spacer
tctcggcatcgcgaccggcacggcgatcggcgg	Protospacer
. ********** ****** ****** *   * 

120. spacer 3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021795 (Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence) position: , mismatch: 9, identity: 0.727

cgtcggcatcgccaccggcccggcgaacctggt	CRISPR spacer
tctcggcatcgcgaccggcacggcgatcggcgg	Protospacer
. ********** ****** ****** *   * 

121. spacer 3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021806 (Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence) position: , mismatch: 9, identity: 0.727

cgtcggcatcgccaccggcccggcgaacctggt	CRISPR spacer
tctcggcatcgcgaccggcacggcgatcggcgg	Protospacer
. ********** ****** ****** *   * 

122. spacer 3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019484 (Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence) position: , mismatch: 9, identity: 0.727

cgtcggcatcgccaccggcccggcgaacctggt	CRISPR spacer
tctcggcatcgcgaccggcacggcgatcggcgg	Protospacer
. ********** ****** ****** *   * 

123. spacer 3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR matches to NC_009620 (Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequence) position: , mismatch: 9, identity: 0.727

cgtcggcatcgccaccggcccggcgaacctggt	CRISPR spacer
tctcggcatcgcgaccggcacggcgatcggcgg	Protospacer
. ********** ****** ****** *   * 

124. spacer 3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019487 (Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence) position: , mismatch: 9, identity: 0.727

cgtcggcatcgccaccggcccggcgaacctggt	CRISPR spacer
tctcggcatcgcgaccggcacggcgatcggcgg	Protospacer
. ********** ****** ****** *   * 

125. spacer 3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR matches to NC_020560 (Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence) position: , mismatch: 9, identity: 0.727

cgtcggcatcgccaccggcccggcgaacctggt	CRISPR spacer
tctcggcatcgcgaccggcacggcgatcggcgg	Protospacer
. ********** ****** ****** *   * 

126. spacer 3.9|4973843|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR matches to NZ_HG938354 (Neorhizobium galegae bv. orientalis str. HAMBI 540 plasmid pHAMBI540a, complete sequence) position: , mismatch: 9, identity: 0.727

cgagaccgcccccggcatcacgctcgcccggct	CRISPR spacer
accgaccgcccccggcatctcgctcggccataa	Protospacer
   **************** ****** **.   

127. spacer 3.14|4974148|33|NZ_CP009922|CRISPRCasFinder,CRT matches to NZ_CP040822 (Paraoceanicella profunda strain D4M1 plasmid pD4M1D, complete sequence) position: , mismatch: 9, identity: 0.727

gcacgacgggggcccgatgcctcccgaggctcc	CRISPR spacer
ctccgacgggggctcgatgccccccgaggagaa	Protospacer
 . **********.*******.*******    

128. spacer 2.3|4962114|34|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032325 (Azospirillum brasilense strain MTCC4035 plasmid p4, complete sequence) position: , mismatch: 10, identity: 0.706

tcgggtccacccgctccgcctcgcgccgcagggc	CRISPR spacer
gcgggtccatccgcgccgcctcgcgcggggaaat	Protospacer
 ********.**** *********** * .....

129. spacer 2.3|4962114|34|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007796 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p3, complete sequence) position: , mismatch: 10, identity: 0.706

tcgggtccacccgctccgcctcgcgccgcagggc	CRISPR spacer
gcgggtccatccgcgccgcctcgcgcggggaaat	Protospacer
 ********.**** *********** * .....

130. spacer 2.3|4962114|34|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029357 (Azospirillum sp. CFH 70021 plasmid unnamed2) position: , mismatch: 10, identity: 0.706

tcgggtccacccgctccgcctcgcgccgcagggc	CRISPR spacer
tgaaatgcacctgctccgcctcgcgctgcagcag	Protospacer
* ...* ****.**************.**** . 

131. spacer 2.13|4962726|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046574 (Rhodococcus sp. WAY2 plasmid pRWAY02, complete sequence) position: , mismatch: 10, identity: 0.697

ccagcggcgggggagcggttcggcgaggagcga	CRISPR spacer
gctgcggcgcgggagcggttcgacgagttcacc	Protospacer
 * ****** ************.****      

132. spacer 3.3|4973477|33|NZ_CP009922|CRISPRCasFinder,CRT matches to MH229864 (Streptomyces phage UNTPL, complete genome) position: , mismatch: 10, identity: 0.697

gcggcggccggcggcgcgcacgtgcgcacctgc	CRISPR spacer
cgcgcggacggcggcgcgcacgagcgcgaagac	Protospacer
   **** ************** ****.   .*

133. spacer 3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050104 (Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b2, complete sequence) position: , mismatch: 10, identity: 0.697

cgtcggcatcgccaccggcccggcgaacctggt	CRISPR spacer
cgtcggcatcgccccctgcccggcaatggaaac	Protospacer
************* ** *******.*    ...

134. spacer 3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025507 (Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvA, complete sequence) position: , mismatch: 10, identity: 0.697

cgtcggcatcgccaccggcccggcgaacctggt	CRISPR spacer
cgtcggcatcgccccctgcccggcaatggaaac	Protospacer
************* ** *******.*    ...

135. spacer 3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050109 (Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b2, complete sequence) position: , mismatch: 10, identity: 0.697

cgtcggcatcgccaccggcccggcgaacctggt	CRISPR spacer
cgtcggcatcgccccctgcccggcaatggaaac	Protospacer
************* ** *******.*    ...

136. spacer 3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP048281 (Rhizobium leguminosarum bv. viciae 248 plasmid pRle248e, complete sequence) position: , mismatch: 10, identity: 0.697

cgtcggcatcgccaccggcccggcgaacctggt	CRISPR spacer
cgtcggcatcgccccctgcccggcaatggaaac	Protospacer
************* ** *******.*    ...

137. spacer 3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022666 (Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR1, complete sequence) position: , mismatch: 10, identity: 0.697

cgtcggcatcgccaccggcccggcgaacctggt	CRISPR spacer
cgtcggcatcgccccctgcccggcaatggaaac	Protospacer
************* ** *******.*    ...

138. spacer 3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050086 (Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b7, complete sequence) position: , mismatch: 10, identity: 0.697

cgtcggcatcgccaccggcccggcgaacctggt	CRISPR spacer
cgtcggcatcgccccctgcccggcaatggaaac	Protospacer
************* ** *******.*    ...

139. spacer 3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050081 (Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b5, complete sequence) position: , mismatch: 10, identity: 0.697

cgtcggcatcgccaccggcccggcgaacctggt	CRISPR spacer
cgtcggcatcgccccctgcccggcaatggaaac	Protospacer
************* ** *******.*    ...

140. spacer 3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049731 (Rhizobium leguminosarum strain A1 plasmid pRL12, complete sequence) position: , mismatch: 10, identity: 0.697

cgtcggcatcgccaccggcccggcgaacctggt	CRISPR spacer
cgtcggcatcgccccctgcccggcaatggaaac	Protospacer
************* ** *******.*    ...

141. spacer 3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030761 (Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.697

cgtcggcatcgccaccggcccggcgaacctggt	CRISPR spacer
cgtcggcatcgccccctgcccggcaatggaaac	Protospacer
************* ** *******.*    ...

142. spacer 3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022565 (Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK01, complete sequence) position: , mismatch: 10, identity: 0.697

cgtcggcatcgccaccggcccggcgaacctggt	CRISPR spacer
cgtcggcatcgccccctgcccggcaatggaaac	Protospacer
************* ** *******.*    ...

143. spacer 3.6|4973660|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053206 (Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1D, complete sequence) position: , mismatch: 10, identity: 0.697

cgtcggcatcgccaccggcccggcgaacctggt	CRISPR spacer
cgtcggcatcgccccctgcccggcaatggaaac	Protospacer
************* ** *******.*    ...

144. spacer 3.7|4973721|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033582 (Streptomyces sp. ADI95-16 plasmid pADI95-16a, complete sequence) position: , mismatch: 10, identity: 0.697

gacgacgccgcccagccggacggagccacggac	CRISPR spacer
aaggacgccgcccacccggacggcgccgtcacg	Protospacer
.* *********** ******** ***.. .  

145. spacer 3.8|4973782|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032923 (Agrobacterium tumefaciens strain 1D1108 plasmid pAt1D1108a, complete sequence) position: , mismatch: 10, identity: 0.697

ccggcgtgtggggctcgcctacacgctggatct	CRISPR spacer
tgccagggtggcgctcgcctacacggtggatac	Protospacer
.    * **** ************* ***** .

146. spacer 3.13|4974087|33|NZ_CP009922|CRISPRCasFinder,CRT,PILER-CR matches to NC_011892 (Methylobacterium nodulans ORS 2060 plasmid pMNOD01, complete sequence) position: , mismatch: 10, identity: 0.697

gcgccatgatcgcggggtcgagaccgacctcac	CRISPR spacer
caacgatgatcgcgtggtcgagatcgaccaggt	Protospacer
  .* ********* ********.*****  ..

147. spacer 2.18|4963031|33|NZ_CP009922|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP043044 (Gluconobacter thailandicus strain HD924 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.667

cccggtgcagacgcggagcgttatcgcggcgtg	CRISPR spacer
agtggcgcggacgcggagcgttatcgctcatct	Protospacer
  .**.**.******************    . 

148. spacer 3.3|4973477|33|NZ_CP009922|CRISPRCasFinder,CRT matches to NZ_CP047053 (Clavibacter michiganensis subsp. michiganensis strain MSF322 plasmid pMSF1, complete sequence) position: , mismatch: 15, identity: 0.545

gcggcggccggcggcgcgcacgtgcgcacctgc---------	CRISPR spacer
---------tggtgcgcgcacgtgggcgccggcggccgcgtg	Protospacer
          *  *********** **.** **         

149. spacer 3.3|4973477|33|NZ_CP009922|CRISPRCasFinder,CRT matches to NZ_CP011808 (Pandoraea faecigallinarum strain DSM 23572 plasmid pPF72-1, complete sequence) position: , mismatch: 17, identity: 0.485

gcggcggccggcggcgcgcacgtgcgcacctgc---------	CRISPR spacer
---------gtgggtgcgcacgttcgcgcagccggcacgacc	Protospacer
         *  **.******** ***.*   *         

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site
DBSCAN-SWA_1	5392720 : 5399456	8	Streptomyces_phage(50.0%)	NA	NA

Sequences of DBSCAN-SWA_1

Nucleotide sequences of DBSCAN-SWA_1

>NZ_CP009922|5392720:5399456|DBSCAN-SWA
GATGACCGTCCTCCTCGCCGTCGGACTCGGGGCCACCCTGGTGCCCGCGGTGAACGCGGCTCCCGTCCGGGCCGCCGGCACCACCTGCGAGACGGCGACGAACTGGGTCGCCGGCACCTGGTACCCGGCCGGCAGCATCGTCCGGTACAACGGCAGCTACTACCGGGCGGAACACGAGAACCCGGGCTACGACCCGGTCATCAGCTACTGGTACTGGCATCCGCACAGCTGCGACGGCGGCGGGAACCCGGGCAACCCGAGCGGGTTCGTCGTGAGCGAGGCCCAGTTCAACCAGATGTTCCCGAACCGGAACTCCTTCTACACCTACAGCGGCCTGGTCGCGGCGCTCAGCTCCTACCCCGGCTTCGCCAACACCGGCAGCGACGAGGTCAAGCGCCGCGAGGCCGCGGCTTTCCTTGCCAACGTCAGCCACGAGACCGGCGGCCTGGTCCACATCGTGGAGCAGAACACCGCCAACTACCCCCACTACTGCGACTGGAGCCAGCCCTACGGCTGCCCGGCCGGCCAGGCCGCCTACTACGGTCGCGGTCCCATCCAGCTGAGCTGGAACTTCAACTACAAGGCCGCGGGTGACGCCCTCGGCATCGACCTGCTCGGCAACCCCTGGCTGGTGCAGAACGACGCGGCCGTCGCCTGGCGCACCGCCCTGTGGTTCTGGAACACCCAGTCGGGTGCCGGGAACATGAGCGGCCACCAGGCCATCGTCAGCGGCGCCGGCTTCGGTGAGTCGATCCGCAGCATCAACGGCAGCATCGAGTGCAACGGCGGCAACCCCGGCCAGGTCCAGAGCCGGGTCAACACCTTCACCCACTTCAGCCAGCTGCTGGGCACCACCACCGGCGGCAACCTCTACTGCTGATCCGGGGCACGTACGGCGGTCCCCGCGCGACCCACGCCCCCTCCCGGCGAGCCACCACGGCCCGCCGGGAGGGGGTTGGCCGGCCCTGCCGCACGGGCACGCGCCATGAAGAGTTGAACGACGTGGCGGCGCGCGCCTCAGACCAGGGACAGGCCGAAGGAGTTCAGGGCCCGGACGACGGGCAGGTGGTACGAGGTGCCGCCCGTCACGCAGTTGCCACTGCTCCCGATCAGCACGCCCACCCCGGCGCTGCCGGAGAAGGACGGCGTGCCGGGCGCGGTGCCGGACTCCACGCAGAGGTTCGCGGCGAAGACCCCGCTGTAGGCCCCACTCCCCACATTGACCGTCAGATTGACGGCCGTGACCGTGCCGCATCTCGTCCCCGAGGCGGGCGTCGCCAGGCACACCCGCCCGCCCACGACGGGCGAGGCGGCCCCGGTGATCGGGTACCCGGCACCGCCGACGCTGATCTCACCCGGCGCGTTCACCGTCGCGTTGTACTGGATCAGCGCCCAGCCACCGCCGGGGAAGGAGCTCGCCGCCGTGGTGCCGATCGGCACGGTGAGGGCGGAATCCGCGTACCAGGTGGTGACGGCGCCGCCGCAGCCGCCCGGGAGCAGGCCGTAGCGCTGGGTCCCGCCGCCGTGGGCGTTGAAGCCGATGGCGCAGGAACCGCCGGACGAGCTGTACACGCGATCGCCGCCGCGTACCGTCGGGCCGGCCGCGACGGCGGGGGTCGCGATGAGCAGCGACATCGCGGTCAGCAGGGCCAACAGGGCGGATCCGTACCGGAGCAGACGCATGGCGGCCTCCTGGGGGAATGAGGAAGAGGGGCAGTCGCATGGATGACATGCCCCCGTCATTCTGCCCGTCGCGCCCCGACCTCAGGCCGCCGAGCGCGGTGTCGTGATCCCGCCGGTGCCGGCGGCCGCGGTCGGGCAGCCTGGGCGCATGACGACAGTGAGGTATCAGGCGTCCGCCATCCCCGCGCACGTTCTGGACGCCCTGCGGGCACGCGACGACGCCGGAGCGGTTCCCCGTCCGCACCCGCACGACGCGAACGGATCGCCGCTGCGCTGCTGTCTGCGCCGTGCCCGCGCCGGGGAACGCCTCTTGCTCCTCTCCTACGCCCCGCTGCGCCGGTGGGCGGCGGAGAAGGGCGTCGACCCGGGAGCGTATGACGAGGTGGGGCCGGTCTTCGTCCACACCGACCGGTGCGAGGGCCCGGACCCGGCGATCGCTCATCCGTTCGCCGAGACCGGGGCGCTGCGCGTGCTGCGCCGGTACAGCGGCGCAGGGTGGATCACGGGAGGCGAACTCGTGCGGCTGCCCCAGGATCCGGGACGCGCGCGAGCCACCGTGGACCGGGCGCTGCACACGGCCTTCGCCGACCCACAGGTCGCACGCGTGCACATACGGGCGGTGGAGTACGGCTGCTTCCTGTACGAGGTGCCCAGGCCCTGACCATTCCGCCGGTGGCCGTTCGCCGAGCCGGCCACCGCGTGAGCCTTCGGCGCCCCGGCGGTCCGGTCCTGCGGCGACGCCACCGCGCGGCCCGGGACACGTCCTAGTTCTCGACTCCCCGCGCGCTGAGCTCCTTCAGCCAGGAGGGCCCGCTCAGCAGCTCCAGCAGCAGCAACAGCCTGGTCAGCGGGTTCCACTCGGTCTCCTCGCGACCCGTCGCCGGGCGGGCGGCCCCCGTCGCGCCCGCGGCGGCCGTACGGGCGGGGGCAGCAGCGCCCAGACCGCCTTGCCATGGGTGTTGGGCGCGGTCCAGCCCCAGGTCTGCGCCAGTGACTCCAGGACGTGCAGTCCCCGGCCCGACTCCTGGAAGAAGTCCGGCTCCCGTACCACCGGAACCTCGCTGCCCGGGTCGAAGACCGCGCACAGCACCGAACCGCCGCAGTGCACCAGGCTCAGCAGAAACGGTTGGTCACGGGTGGCCGGCGGCAGCGGACGACCGGCGGAACCGGTCGGCGGCGCACCGTACCGCAGGGCGTTGGTGACCAGCTCCGAGACGATCACCGTGGCGTCGTCCGCCAGCTCCGTCAGCCCCCATCCGGCCAGGGTCGTGCGCGTGAGCTCCCGCGCGGCGGCTGGGGAGGTGGGCGAGTCGGCCAGCGGAAAGGTCGCGAAACCGGCGGAGTCCGGCTCGGCGCCGTCCGAACCACGCATCGGGCCACGGCCGTCCGGGGGCGGCAGCGCGGGCAGTCCGCCGAGCGCCGGCAGCGCGGGCAGCCCCGGCCCGGCCGCGGGGCTGAGCGCCGCCGCACCCCGGGCCCCCCTCACTCGCTGCCCCGGTGTTTCCCCGGGCGTCCACCACGGCGAGTGAGCTGGCATAGGTCCTCCGCTGCACTGTGTTTCCAAAAGCTGACTCTGAGCGACGACTCCGCTGGGTCTATCCTCACTGAACCGAGCGTATCGCTGCAAGTACATCTGAAAGAACGAATGCAAGAACAGATGCAAGAACACGCGCCGACGGGGGAAGTAATCGGTCTGGATCCGAACGACCGCCCACCACCGGCCCGCAGAGGCCGGCACGGTGACCGAGGAGGAGTTATGCCGCAGTTCGCCAACGGGATGTCAGCCGAGCGTCTCGAGGGAGCGGTCTGGCGCAAGAGCGCCCGCAGCAACCCGAGCGGAAACTGTGTCGAGGTGGCCGCGTTGGCCGACGGCGCGGTGGCCGTACGCAACTCCCGTGACCCGTTGGGCCCGGCGCTCATCTACACCAGGGCCGAGATGAGCGCCTTCATCAACGGCGCCAAGGACGGCGATTTCGACGATCTGGCCGACGTCACGGGCTAGGTCCTGTCTGACACATGGCGCCGGTCGGGCCCGCGTTGTCTGGTGCTGGGGGCACCTCCCGGCCGAAGGCTGGGGGAGCATCGCAAGGCGGAGGGGCGGCCTCGTAGTGGGCTACTTGGGCGTCTCGACAACGCAGCGAGGTGCCGTGCCAGGCGACGTGGGCCAGGCGGGATTTGTCAGAAAGGGCCTAGCCGCCCGGCCCGGACGGAGCTGAAATTCCCCTGAGTGGAGCGGGCGTTGCTGTACGAGGCGTCCCCGCAGTGCGACACTGGGTGCACATTTCAACCACTCAGGGGAACTCAGATGGCCTCAGCAGAACCCGGCCGCGCCTCCTCCGTGACGGACCTGCTCTCCCACGCGCGGGGCGGCCCCACCGCACTGCGCATCGTGCTCGGCACCCAGCTGCGCCGGCTGCGGGAGGACCGCGGCATCCGTCCCGAGGAGGCCGGCCGGGCGATCCGCGCCTCGCACGCCAAGATCAGCCGGCTGGAACTGGGCCGCGTTGCCGCCAAGGAGCGGGACGTCGCCGATCTGCTCACCCTGTACGGCGTGGTCGACGCCCCGCGCCGCGCCGAACTGCTGGAACTCACCCGGCAGGCCGGCAGTCCGGGCTGGTGGCAGAAGTACAGCGATGTGCTGCCCAACTGGTTCGAGACCCTCATCGGCCTGGAGGAGGCCGCCTCGGTGATCCGCACCTACGAGGTGCAGTTCATCCCCGGGCTGCTGCAGACCCCCGACTACGCACGCGCCTGCATCGCGCTCGGTCACCCCCGTGAGACGCCGCGGCAGATCAACCGGCGGGTCGAACTGCGCCTGGAACGCCAGCAGCTGCTGCGCCGCAGGTGCGGCCCCAAGCTGTGGGCGGTGGTCGACGAGGCGGCCCTGCACCGTCCGCTGGGCGGTGCGGCGGCCATGCGCGCCCAGATCGAGCATCTGCGCGAGCTGGCCGAACTGCCCAATGTGACCATCCAGATCGCGCCGTTCCACCTCGGCGGTCTGGCCACCGCCGGGGCTCCGGTCACCATCCTGCGCTTCATGGAGCCCGATCTGCCGGACATCGTCTACCTGGAGCAGCTCAACAGCGCGCTGTACCTCGACAAGCGGGACGACGTCGAGGACTACATGGCCGTGATGGACAGCCTGTGCGCGAGCGCCGAACCGGACAGCCGCACCCCGGAGTTCCTCTCCCGTCTCTCCTTTCCCGACCCGCCCGTGCCCGGCGCGGGACCGGCCTGAGTCGATCAGGTCGGGCATCTGTTCGGGCACTGGCTCCGGCCCTACGCTGGGAGCGCTCCCATTCATGAGCCGCATCAATGGAGGGTCGGCATGCATTCCCTTGCACACTCACGGCGTTCCGGGCTGTTACGGGCCCTGGCGGTGGCGACCGCCGCGCTGCTGTGTCTCATCCCGTGGGCGGACACCGCCGCCGCGCACGGCTCCACCATCGATCCGATGTCCCGCAACTACAGCTGCTGGAAGCGCTGGGGCAACGACTTCCAGAACCCGGACATGGCCAACCAGGACCCCATGTGCTGGCAGGCGTGGCAGGACAACCCCAGCGCCATGTGGAACTGGAACGGCCTGTACCGCGACGGCGTCAACAACAACCACCAGGCCGCCATCCCGGACGGCCAGCTGTGCAGCGGCGGACAGGCCGAGGGTGGCCGCTACCGCTCCATGGACACCGTGGGCGCCTGGCAGGCGACCAACATCGCCAACAGCTCGAACTTCACGGTGCGGGTGCACGACGCCGCCCTGCACGGCGCCACGTACTTCCAGGTCTACGTCACCAAACAGGGTTTCAACCCGGCGACCCAGGCCCTGAAGTGGAGCGATCTGGAACTGGTGCGCACCACCGGCTCGTACGCGCCGGGCGAGGGCACCCCGTCCACCGAACCGCAGCTCGGCGGTGTCACGGTCTCGATCGACGCCGGCGCTCCGGGGCGTACCGGCCGGCACATGGTCTACACGATCTGGCGGGCCGCGCACATGGATCAGACGTACTACCTGTGCAGCGATGTGATCTTCGGCTGACACGGGAGTGACGCACGGGCTTGCCACCTCCTCGCCCCCCACGGAGGGGGTGGCAGGTCCGGCGCGCCACCTCTCCGGGAAGGTCTCAGATCCAGCGGTCGACCACGGTCACCAGGTCGCGGATGACCTCTTCCCGGTTGGTCTCGTTGAGGATCTCGTGCCGTGCCCGTGGGTAGGCCCGCCAGCTCAGCTCGCGGGTGCCGGCGTAGCGGAAGTCCTCCAGCAGTCCGTACACCAGCGACATCCGGGCGTGGCAGGGGTCCTGGTCCCCGACGGCGAGATGGACGGGCAGGTCGCGCGGGATCCGGGCCTGCTGTGCGGGATCGTTGATCTTGCGGTTTCCCGCCACCCAGTCCAGCGCCAGCCCGGCGCTGAAGGGGAATCCGCAGCGTTCGTCGGCGACGTAGGCGTCCACCTCCGCGGTGTCCCGGGACAACCATTCGAATCCGGTGCGGAACGGATACGGATCGTTGAACGACCCGAACAGCCGCGGTACGAAGGTTGACGCCGCCGCCCGCCCCTCCCGCTCGATCTGCCGGTGCAGCTCATCCAGCGCCGTCTGCGGATCGCATCCGGGCAGCGAGCGGAAGGTCCCGGTCAGCAGCAGCCCGGCGAGTCCGTCCCCGTACTCCTGCGCGTAGTCCCTGGCGAGCTGGGATCCCATGGAGTGCCCGAGCAGCACCAGTGGCACTCCGGGCACCCGCGAGCGCGCCCGCTCGCCGACCAGCCGCAGGTCATCGACGACCGCCCGCCACCCGGAGGCGCCGACCACCCCCAGGCCGCCGGTGTGCGCGGCGGTCGCGCCGTGCCCGCGGTGGTCGGAGGCGATCACCCCCAGGCCGCGCGCGGTCAGCCGGCGGGCGAAGCGGTCGTAGCGCAGCCCGTGCTCGGCGGCTCCGTGCACCAGCTGCACCCAGCCGCGTACGGCGCCGGTGCCGCCGGGCGGGAGCCAGCTGTGGGCCACCACGGTGACGCCGTCGGGCGCGGTGATCTCCTCGGTGCGGGTCTCGGTCTCCAC

Protein sequences of DBSCAN-SWA_1

>NZ_CP009922|5392720:5399456|5394550_5395063_+|WP_046725158.1|DBSCAN-SWA
MTTVRYQASAIPAHVLDALRARDDAGAVPRPHPHDANGSPLRCCLRRARAGERLLLLSYAPLRRWAAEKGVDPGAYDEVGPVFVHTDRCEGPDPAIAHPFAETGALRVLRRYSGAGWITGGELVRLPQDPGRARATVDRALHTAFADPQVARVHIRAVEYGCFLYEVPRP
>NZ_CP009922|5392720:5399456|5397730_5398438_+|WP_030731446.1|DBSCAN-SWA
MHSLAHSRRSGLLRALAVATAALLCLIPWADTAAAHGSTIDPMSRNYSCWKRWGNDFQNPDMANQDPMCWQAWQDNPSAMWNWNGLYRDGVNNNHQAAIPDGQLCSGGQAEGGRYRSMDTVGAWQATNIANSSNFTVRVHDAALHGATYFQVYVTKQGFNPATQALKWSDLELVRTTGSYAPGEGTPSTEPQLGGVTVSIDAGAPGRTGRHMVYTIWRAAHMDQTYYLCSDVIFG
>NZ_CP009922|5392720:5399456|5396707_5397640_+|WP_030731443.1|DBSCAN-SWA
MASAEPGRASSVTDLLSHARGGPTALRIVLGTQLRRLREDRGIRPEEAGRAIRASHAKISRLELGRVAAKERDVADLLTLYGVVDAPRRAELLELTRQAGSPGWWQKYSDVLPNWFETLIGLEEAASVIRTYEVQFIPGLLQTPDYARACIALGHPRETPRQINRRVELRLERQQLLRRRCGPKLWAVVDEAALHRPLGGAAAMRAQIEHLRELAELPNVTIQIAPFHLGGLATAGAPVTILRFMEPDLPDIVYLEQLNSALYLDKRDDVEDYMAVMDSLCASAEPDSRTPEFLSRLSFPDPPVPGAGPA
>NZ_CP009922|5392720:5399456|5398523_5399456_-|WP_046725910.1|DBSCAN-SWA
METETRTEEITAPDGVTVVAHSWLPPGGTGAVRGWVQLVHGAAEHGLRYDRFARRLTARGLGVIASDHRGHGATAAHTGGLGVVGASGWRAVVDDLRLVGERARSRVPGVPLVLLGHSMGSQLARDYAQEYGDGLAGLLLTGTFRSLPGCDPQTALDELHRQIEREGRAAASTFVPRLFGSFNDPYPFRTGFEWLSRDTAEVDAYVADERCGFPFSAGLALDWVAGNRKINDPAQQARIPRDLPVHLAVGDQDPCHARMSLVYGLLEDFRYAGTRELSWRAYPRARHEILNETNREEVIRDLVTVVDRWI
>NZ_CP009922|5392720:5399456|5393736_5394402_-|WP_030731434.1|DBSCAN-SWA
MRLLRYGSALLALLTAMSLLIATPAVAAGPTVRGGDRVYSSSGGSCAIGFNAHGGGTQRYGLLPGGCGGAVTTWYADSALTVPIGTTAASSFPGGGWALIQYNATVNAPGEISVGGAGYPITGAASPVVGGRVCLATPASGTRCGTVTAVNLTVNVGSGAYSGVFAANLCVESGTAPGTPSFSGSAGVGVLIGSSGNCVTGGTSYHLPVVRALNSFGLSLV
>NZ_CP009922|5392720:5399456|5395246_5395888_-|WP_053116295.1|DBSCAN-SWA
MRGARGAAALSPAAGPGLPALPALGGLPALPPPDGRGPMRGSDGAEPDSAGFATFPLADSPTSPAAARELTRTTLAGWGLTELADDATVIVSELVTNALRYGAPPTGSAGRPLPPATRDQPFLLSLVHCGGSVLCAVFDPGSEVPVVREPDFFQESGRGLHVLESLAQTWGWTAPNTHGKAVWALLPPPVRPPRARRGPPARRRVARRPSGTR
>NZ_CP009922|5392720:5399456|5396158_5396404_+|WP_030731440.1|DBSCAN-SWA
MPQFANGMSAERLEGAVWRKSARSNPSGNCVEVAALADGAVAVRNSRDPLGPALIYTRAEMSAFINGAKDGDFDDLADVTG
>NZ_CP009922|5392720:5399456|5392720_5393599_+|WP_030731431.1|DBSCAN-SWA
MTVLLAVGLGATLVPAVNAAPVRAAGTTCETATNWVAGTWYPAGSIVRYNGSYYRAEHENPGYDPVISYWYWHPHSCDGGGNPGNPSGFVVSEAQFNQMFPNRNSFYTYSGLVAALSSYPGFANTGSDEVKRREAAAFLANVSHETGGLVHIVEQNTANYPHYCDWSQPYGCPAGQAAYYGRGPIQLSWNFNYKAAGDALGIDLLGNPWLVQNDAAVAWRTALWFWNTQSGAGNMSGHQAIVSGAGFGESIRSINGSIECNGGNPGQVQSRVNTFTHFSQLLGTTTGGNLYC

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_030731431.1|5392720_5393599_+	chitinase	A0A2H4JHX4	uncultured_Caudovirales_phage	2.7e-07	33.3
WP_030731434.1|5393736_5394402_-	hypothetical protein	NA	NA	NA	NA
WP_046725158.1|5394550_5395063_+	DUF1203 domain-containing protein	NA	NA	NA	NA
WP_053116295.1|5395246_5395888_-	ATP-binding protein	A0A1V0E640	Streptomyces_phage	2.7e-09	35.3
WP_030731440.1|5396158_5396404_+	DUF397 domain-containing protein	A0A1J0MC88	Streptomyces_phage	9.1e-06	41.7
WP_030731443.1|5396707_5397640_+	helix-turn-helix domain-containing protein	A0A1J0MBX1	Streptomyces_phage	2.0e-13	34.9
WP_030731446.1|5397730_5398438_+	lytic polysaccharide monooxygenase	A0A097P1Q9	Cydia_pomonella_granulosis_virus	8.2e-07	26.9
WP_046725910.1|5398523_5399456_-	alpha/beta fold hydrolase	Q8QN19	Cowpox_virus	1.0e-09	26.2