CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number
NZ_CP011434	Salmonella enterica subsp. enterica serovar Typhimurium strain YU39 isolate YUHS 05-78 plasmid pYU39_4.2, complete sequence	0 crisprs	NA	0	0	0
NZ_CP011428	Salmonella enterica subsp. enterica serovar Typhimurium strain YU39 isolate YUHS 05-78 chromosome, complete genome	2 crisprs	WYL,DinG,cas3,DEDDh,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,PD-DExK,RT	2	47	11
NZ_CP011435	Salmonella enterica subsp. enterica serovar Typhimurium strain YU39 isolate YUHS 05-78 plasmid pYU39_2.7, complete sequence	0 crisprs	NA	0	0	0
NZ_CP011433	Salmonella enterica subsp. enterica serovar Typhimurium strain YU39 isolate YUHS 05-78 plasmid pYU39_4.8, complete sequence	0 crisprs	NA	0	0	0
NZ_CP011431	Salmonella enterica subsp. enterica serovar Typhimurium strain YU39 isolate YUHS 05-78 plasmid pYU39_IncX, complete sequence	0 crisprs	NA	0	0	0
NZ_CP011429	Salmonella enterica subsp. enterica serovar Typhimurium strain YU39 isolate YUHS 05-78 plasmid pYU39_IncA/C, complete sequence	0 crisprs	DEDDh	0	0	1
NZ_CP011432	Salmonella enterica subsp. enterica serovar Typhimurium strain YU39 isolate YUHS 05-78 plasmid pYU39_5.1, complete sequence	0 crisprs	NA	0	0	0
NZ_CP011430	Salmonella enterica subsp. enterica serovar Typhimurium strain YU39 isolate YUHS 05-78 plasmid pYU39_89, complete sequence	0 crisprs	NA	0	0	1

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

57174 : 128723

Escherichia_phage(14.29%)

integrase,transposase

attL 117404:117463|attR 129566:130385

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000608644.1\|57174_58437_+\|transposase	IS1380-like element ISEc9 family transposase	A0A1B0VDR3	Salmonella_phage	1.3e-39	100.0
WP_000976514.1\|58760_59906_+	class C beta-lactamase CMY-2	NA	NA	NA	NA
WP_001221666.1\|59999_60533_+	lipocalin family protein	A0A1W6JNX6	Morganella_phage	6.1e-47	54.1
WP_000118520.1\|60529_60847_-	quaternary ammonium compound efflux SMR transporter SugE	NA	NA	NA	NA
WP_001447736.1\|61103_61529_+	hypothetical protein	NA	NA	NA	NA
WP_000606835.1\|61574_67061_+	DUF4165 domain-containing protein	NA	NA	NA	NA
WP_001259346.1\|67209_67917_+	DsbC family protein	NA	NA	NA	NA
WP_000637384.1\|67913_70361_+	type IV secretion system protein TraC	NA	NA	NA	NA
WP_000351984.1\|70375_70693_+	hypothetical protein	NA	NA	NA	NA
WP_001010740.1\|70689_71220_+	S26 family signal peptidase	NA	NA	NA	NA
WP_001447719.1\|71182_72448_+	conjugal transfer protein TraW	NA	NA	NA	NA
WP_000575345.1\|72444_73116_+	EAL domain-containing protein	NA	NA	NA	NA
WP_000983282.1\|73112_74120_+	conjugal transfer protein TraU	NA	NA	NA	NA
WP_001447718.1\|74223_77031_+	conjugal transfer mating pair stabilization protein TraN	NA	NA	NA	NA
WP_000709517.1\|77069_77930_-	hypothetical protein	NA	NA	NA	NA
WP_000796664.1\|78052_78694_-	hypothetical protein	NA	NA	NA	NA
WP_000547566.1\|78987_79308_+	hypothetical protein	NA	NA	NA	NA
WP_001186917.1\|79611_79797_+	hypothetical protein	NA	NA	NA	NA
WP_000085160.1\|80016_80985_+	AAA domain-containing protein	L7TKP0	Rhizobium_phage	1.2e-29	32.6
WP_000739139.1\|80995_81904_+	hypothetical protein	NA	NA	NA	NA
WP_000987165.1\|81964_82495_+	single-stranded DNA-binding protein	A0A291LCB6	Klebsiella_phage	2.6e-42	71.8
WP_001282585.1\|82589_83579_+	phage recombination protein Bet	B5AX97	Iodobacteriophage	1.1e-52	39.6
WP_000706865.1\|83641_84652_+	YqaJ viral recombinase family protein	E0YQ48	Mycobacterium_phage	5.6e-09	28.7
WP_001067858.1\|84876_85581_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.2e-138	99.6
WP_001132147.1\|85754_86105_+	peptidoglycan DD-metalloendopeptidase family protein	A0A2H4JAF5	uncultured_Caudovirales_phage	4.8e-08	40.0
WP_000843496.1\|86138_86336_-	DUF2933 domain-containing protein	NA	NA	NA	NA
WP_001398208.1\|86376_88854_-	Ag(+)-translocating P-type ATPase SilP	A0A218MNH6	uncultured_virus	2.9e-83	35.4
WP_000758221.1\|88950_89391_-	hypothetical protein	NA	NA	NA	NA
WP_022630998.1\|89477_92624_-	Cu(+)/Ag(+) efflux RND transporter permease subunit SilA	S5VTK5	Leptospira_phage	1.5e-60	22.4
WP_001398209.1\|92634_93927_-	Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB	NA	NA	NA	NA
WP_001246155.1\|94040_94394_-	cation efflux system protein CusF	NA	NA	NA	NA
WP_000475512.1\|94421_95807_-	Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC	NA	NA	NA	NA
WP_000697969.1\|95996_96677_+	copper/silver response regulator transcription factor SilR	W8CYM9	Bacillus_phage	2.1e-31	36.0
WP_022630999.1\|96669_98145_+	copper/silver sensor histidine kinase SilS	W8CYF6	Bacillus_phage	1.4e-27	30.1
WP_000790483.1\|98395_98827_+	silver-binding protein SilE	NA	NA	NA	NA
WP_000694953.1\|98970_99321_+	DUF305 domain-containing protein	A0A218MND9	uncultured_virus	1.9e-20	54.3
WP_001148756.1\|101253_102228_+	sensor domain-containing diguanylate cyclase	NA	NA	NA	NA
WP_000796235.1\|103158_103830_+	hypothetical protein	NA	NA	NA	NA
WP_022631000.1\|103849_104638_+\|integrase	phage integrase family protein	I3WFA4	Macacine_betaherpesvirus	5.5e-52	92.0
WP_000639434.1\|107366_107648_+	hypothetical protein	NA	NA	NA	NA
WP_022631019.1\|108556_109882_+	pyridine nucleotide-disulfide oxidoreductase	A0A2K5B2C5	Erysipelothrix_phage	1.9e-113	47.6
WP_000612626.1\|110787_111135_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.6e-62	100.0
WP_000817038.1\|115814_116786_-	ParB/RepB/Spo0J family plasmid partition protein	I3WF22	Macacine_betaherpesvirus	1.4e-150	86.9
117404:117463	attL	NA	NA	NA	NA
WP_001067858.1\|117466_118171_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.2e-138	99.6
WP_000888203.1\|118339_118819_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA
WP_000347934.1\|118888_122041_-	multidrug efflux RND transporter permease subunit OqxB	NA	NA	NA	NA
WP_002914189.1\|122064_123240_-	multidrug efflux RND transporter periplasmic adaptor subunit OqxA	NA	NA	NA	NA
WP_001067858.1\|123559_124264_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.2e-138	99.6
WP_001376233.1\|124387_124672_+	bleomycin resistance protein	NA	NA	NA	NA
WP_000084745.1\|124991_125384_-	NimC/NimA family protein	NA	NA	NA	NA
WP_001206356.1\|125868_126660_-	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2	NA	NA	NA	NA
WP_001336345.1\|126665_126956_-	DUF1010 domain-containing protein	NA	NA	NA	NA
WP_001083725.1\|127067_127565_-	trimethoprim-resistant dihydrofolate reductase DfrA12	A0A0A0PL85	Bacillus_phage	7.5e-23	40.9
WP_000845054.1\|127709_128723_+\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	6.1e-72	45.5
129566:130385	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP011428

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP011428_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011428_1

3105670-3107572

TypeI-E

I-E

Consensus_repeat	Method
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRISPRCasFinder
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	PILER-CR
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRISPRCasFinder

30 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11

The CRISPR arrays of NZ_CP011428_1

>merge|NZ_CP011428|1|3105670-3107572|CRISPRCasFinder,CRT,PILER-CR,CRT,CRISPRCasFinder
GTGTTTATCCCCGCTGGCGCGGGGAACATTTTTCAGCCCTTGTCGACTGCGGAACGCCCCTCGGTTTATCCCCGCTGGCGCGGGGAACACGCGAAATAGTGGGGAAAAACCCCTGGTTAACCCGGTTTATCCCCGCTGGCGCGGGAAACACTAGGCCTTGATACCATCGCTCGCACCTCGTCACGGTTTATCCCCGCTGGCGCGGGGAACACGTTTATTACTGCTTAGTTAATTAATGGGTTGCCGGTTTATCCCCGCTGGCGCGGGGAACACAGGCGAATAATCTCTAATAGTCTCAATTCGTTCGGTTTATCCCCGCTGGCGCGGGGAACACTAAATCTGGCGTCGAGACATTCGAAATAGTGCCGGTTTATCCCCGCTGGCGCGGGGAACACTCTTTTGATTTTGCTGCGATGTTATAACCAGACGGTTTATCCCCGCTGGCGCGGGGAACACTATCCACATATACCCGCAATCATATTCAAGAACGGTTTATCCCCGCTGGCGCGGGGAACACAATCACTGCGGGGGTATTTAGCGGAAACGGCTCGGTTTATCCCCGCTGGCGCGGGGAACACGATCGAGTAACGTGCGCTGGAACGCGTCGGCGCGGGGAACACAATTAAAGCCGAGGGTGGCACCGCGCCTTATTCGGTTTATCCCCGCTGGCGCGGGGAACACGCACCTCGAAACGGTTTTAAAACACTACCGTTTCGGTTTATCCCCGCTGGCGCGGGGAACACTGGACCGATGGGGCCAACATCGCCGAACGTGGCGGTTTATCCCCGCTGGCGCGGGGAACACGTTACGTTCGGTAAATGGAAAGCGGCGAATATCGGTTTATCCCCGCTGGCGCGGGGAACACCCAGAAAGTGCCGGTAGTGCCTGATGAACGACCGGTTTATCCCCGCTGGCGCGGGGAACACCGCGCCCACTTCCGTAAAATACAGATAATCCACGGTTTATCCCCGCTGGCGCGGGGAACACGGCAGCGGGCGAGGCAAACACATTCGGGGCGTCGGTTTATCCCCGCTGGCGCGGGGAACACGGTAATTTCTCATCTAACAGCCTGTACGCCTCAGGTTTATCCCCGCTGGCGCGGGGAACACGAATCTAATGCAACAGATGAATAAACACGTAACGGTTTATCCCCGCTGGCGCGGGGAACACTCTTTATCGTCAATGCGAAATTTTCCGCGACGCGGTTTATCCCCGCTGGCGCGGGGAACACTCCCATTCACCAACAACAATATCGCCCTGCAACGGTTTATCCCCGCTGGCGCGGGGAACACCGTTGCGTCAGGTTGATCCAGTGCGTCAGCGGCGGTTTATCCCCGCTGGCGCGGGGAACACTCTCGGTCTCGGTCTCGGTCTCGGTAGTGACGCGGTTTATCCCCGCTGGCGCGGGGAACACACTTCCTTCAGTCTTAACGATAATCCGCAACGCGGTTTATCCCCGCTGGCGCGGGGAACACGCAAAATAGCGATGAGCTGGCTACGCCCACTGGCGGTTTATCCCCGCTGGCGCGGGGAACACAGCCGGCGCGAGCCTGGAGGGTTGAATAATGGCGGTTTATCCCCGCTGGCGCGGGGAACACCAATCTCGCATTCGTTACCCCACCTGCATTTTCGGTTTATCCCCGCTGGCGCGGGGAACACGAGGGGATAGGAGTTACGATCCAGCCTGGTTGCGGTTTATCCCCGCTGGCGCGGGGAACACGTGGTTGCAGACCAATCAGCCCGCCAGCGGTTCGGTTTATCCCCGCTGGCGCGGGGAACACCAGCACGAAAAATTATTTACTGTCGTTGCTCACGGTTTATCCCCGCTGGCGCGGGGAACACTGTAACAGTCCGTCGTTAATCAGCGCGGTGGGAGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP011428|1|1|3105670-3106248|CRISPRCasFinder
GTGTTTATCCCCGCTGGCGCGGGGAACAT	TTTTCAGCCCTTGTCGACTGCGGAACGCCCCT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGAAATAGTGGGGAAAAACCCCTGGTTAACC
CGGTTTATCCCCGCTGGCGCGGGAAACAC	TAGGCCTTGATACCATCGCTCGCACCTCGTCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTTTATTACTGCTTAGTTAATTAATGGGTTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGGCGAATAATCTCTAATAGTCTCAATTCGTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TAAATCTGGCGTCGAGACATTCGAAATAGTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTTTTGATTTTGCTGCGATGTTATAACCAGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TATCCACATATACCCGCAATCATATTCAAGAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AATCACTGCGGGGGTATTTAGCGGAAACGGCT
CGGTTTATCCCCGCTGGCGCGGGGAACACGATCGAGTAACGTGCGCTGGAACGCGTCGGCGCGGGGAACACAATTAAAGCCGAGGGTGGCACCGCGCCTTATTCGGTTTATCCCCGCTGGCGCGGGGAACAC	GCACCTCGAAACGGTTTTAAAACACTACCGTTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGGACCGATGGGGCCAACATCGCCGAACGTGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTTACGTTCGGTAAATGGAAAGCGGCGAATAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CCAGAAAGTGCCGGTAGTGCCTGATGAACGAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGCGCCCACTTCCGTAAAATACAGATAATCCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGCAGCGGGCGAGGCAAACACATTCGGGGCGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGTAATTTCTCATCTAACAGCCTGTACGCCTC
AGGTTTATCCCCGCTGGCGCGGGGAACAC	GAATCTAATGCAACAGATGAATAAACACGTAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTTTATCGTCAATGCGAAATTTTCCGCGACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCCCATTCACCAACAACAATATCGCCCTGCAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGTTGCGTCAGGTTGATCCAGTGCGTCAGCGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTCGGTCTCGGTCTCGGTCTCGGTAGTGACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACTTCCTTCAGTCTTAACGATAATCCGCAACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCAAAATAGCGATGAGCTGGCTACGCCCACTGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGCCGGCGCGAGCCTGGAGGGTTGAATAATGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CAATCTCGCATTCGTTACCCCACCTGCATTTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GAGGGGATAGGAGTTACGATCCAGCCTGGTTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTGGTTGCAGACCAATCAGCCCGCCAGCGGTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CAGCACGAAAAATTATTTACTGTCGTTGCTCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGTAACAGTCCGTCGTTAATCAGCGCGGTGGG


>NZ_CP011428|1|1|3105670-3106247|CRT
GTGTTTATCCCCGCTGGCGCGGGGAACAT	TTTTCAGCCCTTGTCGACTGCGGAACGCCCCT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGAAATAGTGGGGAAAAACCCCTGGTTAACC
CGGTTTATCCCCGCTGGCGCGGGAAACAC	TAGGCCTTGATACCATCGCTCGCACCTCGTCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTTTATTACTGCTTAGTTAATTAATGGGTTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGGCGAATAATCTCTAATAGTCTCAATTCGTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TAAATCTGGCGTCGAGACATTCGAAATAGTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTTTTGATTTTGCTGCGATGTTATAACCAGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TATCCACATATACCCGCAATCATATTCAAGAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AATCACTGCGGGGGTATTTAGCGGAAACGGCT
CGGTTTATCCCCGCTGGCGCGGGGAACACGATCGAGTAACGTGCGCTGGAACGCGTCGGCGCGGGGAACAC	AATTAAAGCCGAGGGTGGCACCGCGCCTTATT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCACCTCGAAACGGTTTTAAAACACTACCGTTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGGACCGATGGGGCCAACATCGCCGAACGTGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTTACGTTCGGTAAATGGAAAGCGGCGAATAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CCAGAAAGTGCCGGTAGTGCCTGATGAACGAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGCGCCCACTTCCGTAAAATACAGATAATCCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGCAGCGGGCGAGGCAAACACATTCGGGGCGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGTAATTTCTCATCTAACAGCCTGTACGCCTC
AGGTTTATCCCCGCTGGCGCGGGGAACAC	GAATCTAATGCAACAGATGAATAAACACGTAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTTTATCGTCAATGCGAAATTTTCCGCGACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCCCATTCACCAACAACAATATCGCCCTGCAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGTTGCGTCAGGTTGATCCAGTGCGTCAGCGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTCGGTCTCGGTCTCGGTCTCGGTAGTGACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACTTCCTTCAGTCTTAACGATAATCCGCAACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCAAAATAGCGATGAGCTGGCTACGCCCACTGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGCCGGCGCGAGCCTGGAGGGTTGAATAATGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CAATCTCGCATTCGTTACCCCACCTGCATTTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GAGGGGATAGGAGTTACGATCCAGCCTGGTTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTGGTTGCAGACCAATCAGCCCGCCAGCGGTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CAGCACGAAAAATTATTTACTGTCGTTGCTCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGTAACAGTCCGTCGTTAATCAGCGCGGTGGG


>NZ_CP011428|1|1|3105731-3107572|PILER-CR
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGAAATAGTGGGGAAAAACCCCTGGTTAACC
CGGTTTATCCCCGCTGGCGCGGGAAACAC	TAGGCCTTGATACCATCGCTCGCACCTCGTCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTTTATTACTGCTTAGTTAATTAATGGGTTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGGCGAATAATCTCTAATAGTCTCAATTCGTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TAAATCTGGCGTCGAGACATTCGAAATAGTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTTTTGATTTTGCTGCGATGTTATAACCAGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TATCCACATATACCCGCAATCATATTCAAGAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AATCACTGCGGGGGTATTTAGCGGAAACGGCT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GATCGAGTAACGTGCGCTGGAACGCGTC
GGCGCGGGGAACACAATTAAAGCCGAGGG	TGGCACCGCGCCTTATTCGGTTTATCCCCGCT
GGCGCGGGGAACACGCACCTCGAAACGGT	TTTAAAACACTACCGTTTCGGTTTATCCCCGCT
GGCGCGGGGAACACTGGACCGATGGGGCC	AACATCGCCGAACGTGGCGGTTTATCCCCGCT
GGCGCGGGGAACACGTTACGTTCGGTAAA	TGGAAAGCGGCGAATATCGGTTTATCCCCGCT
GGCGCGGGGAACACCCAGAAAGTGCCGGT	AGTGCCTGATGAACGACCGGTTTATCCCCGCT
GGCGCGGGGAACACCGCGCCCACTTCCGT	AAAATACAGATAATCCACGGTTTATCCCCGCT
GGCGCGGGGAACACGGCAGCGGGCGAGGC	AAACACATTCGGGGCGTCGGTTTATCCCCGCT
GGCGCGGGGAACACGGTAATTTCTCATCT	AACAGCCTGTACGCCTCAGGTTTATCCCCGCT
GGCGCGGGGAACACGAATCTAATGCAACA	GATGAATAAACACGTAACGGTTTATCCCCGCT
GGCGCGGGGAACACTCTTTATCGTCAATG	CGAAATTTTCCGCGACGCGGTTTATCCCCGCT
GGCGCGGGGAACACTCCCATTCACCAACA	ACAATATCGCCCTGCAACGGTTTATCCCCGCT
GGCGCGGGGAACACCGTTGCGTCAGGTTG	ATCCAGTGCGTCAGCGGCGGTTTATCCCCGCT
GGCGCGGGGAACACTCTCGGTCTCGGTCT	CGGTCTCGGTAGTGACGCGGTTTATCCCCGCT
GGCGCGGGGAACACACTTCCTTCAGTCTT	AACGATAATCCGCAACGCGGTTTATCCCCGCT
GGCGCGGGGAACACGCAAAATAGCGATGA	GCTGGCTACGCCCACTGGCGGTTTATCCCCGCT
GGCGCGGGGAACACAGCCGGCGCGAGCCT	GGAGGGTTGAATAATGGCGGTTTATCCCCGCT
GGCGCGGGGAACACCAATCTCGCATTCGT	TACCCCACCTGCATTTTCGGTTTATCCCCGCT
GGCGCGGGGAACACGAGGGGATAGGAGTT	ACGATCCAGCCTGGTTGCGGTTTATCCCCGCT
GGCGCGGGGAACACGTGGTTGCAGACCAA	TCAGCCCGCCAGCGGTTCGGTTTATCCCCGCT
GGCGCGGGGAACACCAGCACGAAAAATTA	TTTACTGTCGTTGCTCACGGTTTATCCCCGCT
GGCGCGGGGAACACTGTAACAGTCCGTCG	TTAATCAGCGCGGTGGGAGGTTTATCCCCGCT
GGCGCGGGGAACAC

>NZ_CP011428|1|2|3106261-3107572|CRT
	TTTTCAGCCCTTGTCGACTGCGGAACGCCCCT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGAAATAGTGGGGAAAAACCCCTGGTTAACC
CGGTTTATCCCCGCTGGCGCGGGAAACAC	TAGGCCTTGATACCATCGCTCGCACCTCGTCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTTTATTACTGCTTAGTTAATTAATGGGTTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGGCGAATAATCTCTAATAGTCTCAATTCGTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TAAATCTGGCGTCGAGACATTCGAAATAGTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTTTTGATTTTGCTGCGATGTTATAACCAGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TATCCACATATACCCGCAATCATATTCAAGAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AATCACTGCGGGGGTATTTAGCGGAAACGGCT
CGGTTTATCCCCGCTGGCGCGGGGAACACGATCGAGTAACGTGCGCTGGAACGCGTCGGCGCGGGGAACAC	AATTAAAGCCGAGGGTGGCACCGCGCCTTATT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCACCTCGAAACGGTTTTAAAACACTACCGTTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGGACCGATGGGGCCAACATCGCCGAACGTGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTTACGTTCGGTAAATGGAAAGCGGCGAATAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CCAGAAAGTGCCGGTAGTGCCTGATGAACGAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGCGCCCACTTCCGTAAAATACAGATAATCCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGCAGCGGGCGAGGCAAACACATTCGGGGCGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGTAATTTCTCATCTAACAGCCTGTACGCCTC
AGGTTTATCCCCGCTGGCGCGGGGAACAC	GAATCTAATGCAACAGATGAATAAACACGTAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTTTATCGTCAATGCGAAATTTTCCGCGACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCCCATTCACCAACAACAATATCGCCCTGCAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGTTGCGTCAGGTTGATCCAGTGCGTCAGCGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTCGGTCTCGGTCTCGGTCTCGGTAGTGACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACTTCCTTCAGTCTTAACGATAATCCGCAACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCAAAATAGCGATGAGCTGGCTACGCCCACTGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGCCGGCGCGAGCCTGGAGGGTTGAATAATGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CAATCTCGCATTCGTTACCCCACCTGCATTTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GAGGGGATAGGAGTTACGATCCAGCCTGGTTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTGGTTGCAGACCAATCAGCCCGCCAGCGGTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CAGCACGAAAAATTATTTACTGTCGTTGCTCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGTAACAGTCCGTCGTTAATCAGCGCGGTGGG
AGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP011428|1|2|3106322-3107572|CRISPRCasFinder
	TTTTCAGCCCTTGTCGACTGCGGAACGCCCCT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGAAATAGTGGGGAAAAACCCCTGGTTAACC
CGGTTTATCCCCGCTGGCGCGGGAAACAC	TAGGCCTTGATACCATCGCTCGCACCTCGTCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTTTATTACTGCTTAGTTAATTAATGGGTTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGGCGAATAATCTCTAATAGTCTCAATTCGTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TAAATCTGGCGTCGAGACATTCGAAATAGTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTTTTGATTTTGCTGCGATGTTATAACCAGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TATCCACATATACCCGCAATCATATTCAAGAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AATCACTGCGGGGGTATTTAGCGGAAACGGCT
CGGTTTATCCCCGCTGGCGCGGGGAACACGATCGAGTAACGTGCGCTGGAACGCGTCGGCGCGGGGAACACAATTAAAGCCGAGGGTGGCACCGCGCCTTATTCGGTTTATCCCCGCTGGCGCGGGGAACAC	GCACCTCGAAACGGTTTTAAAACACTACCGTTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGGACCGATGGGGCCAACATCGCCGAACGTGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTTACGTTCGGTAAATGGAAAGCGGCGAATAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CCAGAAAGTGCCGGTAGTGCCTGATGAACGAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGCGCCCACTTCCGTAAAATACAGATAATCCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGCAGCGGGCGAGGCAAACACATTCGGGGCGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGTAATTTCTCATCTAACAGCCTGTACGCCTC
AGGTTTATCCCCGCTGGCGCGGGGAACAC	GAATCTAATGCAACAGATGAATAAACACGTAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTTTATCGTCAATGCGAAATTTTCCGCGACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCCCATTCACCAACAACAATATCGCCCTGCAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGTTGCGTCAGGTTGATCCAGTGCGTCAGCGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTCGGTCTCGGTCTCGGTCTCGGTAGTGACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACTTCCTTCAGTCTTAACGATAATCCGCAACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCAAAATAGCGATGAGCTGGCTACGCCCACTGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGCCGGCGCGAGCCTGGAGGGTTGAATAATGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CAATCTCGCATTCGTTACCCCACCTGCATTTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GAGGGGATAGGAGTTACGATCCAGCCTGGTTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTGGTTGCAGACCAATCAGCCCGCCAGCGGTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CAGCACGAAAAATTATTTACTGTCGTTGCTCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGTAACAGTCCGTCGTTAATCAGCGCGGTGGG
AGGTTTATCCCCGCTGGCGCGGGGAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011428.1\|WP_000080404.1\|3117612_3118347_-\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP011428.1\|WP_000281486.1\|3108878_3109529_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
NZ_CP011428.1\|WP_000144832.1\|3107961_3108882_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP011428.1\|WP_000085114.1\|3109510_3110257_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
NZ_CP011428.1\|WP_001173663.1\|3101408_3102014_-\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
NZ_CP011428.1\|WP_001118109.1\|3101034_3101391_-\|DUF3561-family-protein	unknown	unknown	gnl\|CDD\|371891
NZ_CP011428.1\|WP_000210927.1\|3120134_3121934_-\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|182862
NZ_CP011428.1\|WP_000134246.1\|3098278_3099328_-\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
NZ_CP011428.1\|WP_000517480.1\|3100532_3100844_-\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
NZ_CP011428.1\|WP_001518648.1\|3107668_3107962_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
NZ_CP011428.1\|WP_000206415.1\|3110267_3111326_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|273843
NZ_CP011428.1\|WP_001221538.1\|3097536_3098298_-\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
NZ_CP011428.1\|WP_020837087.1\|3102000_3103440_-\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
NZ_CP011428.1\|WP_020837085.1\|3111339_3111900_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NZ_CP011428.1\|WP_000741650.1\|3099803_3100514_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
NZ_CP011428.1\|WP_001290660.1\|3118422_3120135_-\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
NZ_CP011428.1\|WP_000490481.1\|3104608_3105655_+\|aminopeptidase	unknown	unknown	gnl\|CDD\|182299
NZ_CP011428.1\|WP_001145543.1\|3116571_3117525_+\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
NZ_CP011428.1\|WP_000372384.1\|3103449_3104358_-\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
NZ_CP011428.1\|WP_001219245.1\|3099324_3099804_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851

Protein	Function_ID	Function_description	E-value
NZ_CP011428.1\|WP_000080404.1\|3117612_3118347_-\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	2.40487e-139
NZ_CP011428.1\|WP_000281486.1\|3108878_3109529_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	1.11215e-74
NZ_CP011428.1\|WP_000144832.1\|3107961_3108882_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	1.21084e-157
NZ_CP011428.1\|WP_000085114.1\|3109510_3110257_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	7.90971e-48
NZ_CP011428.1\|WP_001173663.1\|3101408_3102014_-\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	4.61291e-146
NZ_CP011428.1\|WP_001118109.1\|3101034_3101391_-\|DUF3561-family-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	4.85353e-49
NZ_CP011428.1\|WP_000210927.1\|3120134_3121934_-\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
NZ_CP011428.1\|WP_000134246.1\|3098278_3099328_-\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
NZ_CP011428.1\|WP_000517480.1\|3100532_3100844_-\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	1.08865e-64
NZ_CP011428.1\|WP_001518648.1\|3107668_3107962_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	1.1867e-62
NZ_CP011428.1\|WP_000206415.1\|3110267_3111326_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	2.67517e-131
NZ_CP011428.1\|WP_001221538.1\|3097536_3098298_-\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.7078e-146
NZ_CP011428.1\|WP_020837087.1\|3102000_3103440_-\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
NZ_CP011428.1\|WP_020837085.1\|3111339_3111900_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	3.00753e-33
NZ_CP011428.1\|WP_000741650.1\|3099803_3100514_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	2.67998e-119
NZ_CP011428.1\|WP_001290660.1\|3118422_3120135_-\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
NZ_CP011428.1\|WP_000490481.1\|3104608_3105655_+\|aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
NZ_CP011428.1\|WP_001145543.1\|3116571_3117525_+\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
NZ_CP011428.1\|WP_000372384.1\|3103449_3104358_-\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
NZ_CP011428.1\|WP_001219245.1\|3099324_3099804_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	3.20925e-104

>NZ_CP011428.1|WP_000490481.1|3104608_3105655_+|aminopeptidase
MFSATRRFAVILALGVGFILPAQAASPGPGEIANTQARHIATFFPGRMTGSPAEMLSADYLRQQFTQMGYQSDIRTFNSRFIYTTKDNRKNWHNVTGSTVIAAHEGRVPQQIIIMAHLDTYAPQSDADVDANLGGLTLQGMDDNAAGLGVMLELAARLKDIPTHYGIRFIATSGEEEGKLGAENLLKRMSDAEKKNTLLVINLDNLIVGDKLYFNSGKNTPEAVRTLTRDRALAIARRYGIAANTNPGRNPSYPKGTGCCNDAEVFDKAGISVLSVEATNWNLGKKDGYQQRVKNASFPNGNSWHDVRLDNQQHIDKALPGRIERRSRDVVRIMLPLVKELAKAEKTS
>NZ_CP011428.1|WP_000372384.1|3103449_3104358_-|sulfate-adenylyltransferase-subunit-CysD
MDQKRLTHLRQLEAESIHIIREVAAEFANPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYAFRDRTANAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWRNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMVDDDRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESHAQTLPEIIEEMLVSTTSERQGRMIDRDQAGSMELKKRQGYF
>NZ_CP011428.1|WP_020837087.1|3102000_3103440_-|sulfate-adenylyltransferase-subunit-CysN
MNTILAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTERRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYREETFARIREDYLTFAEQLPGDLDIRFVPLSALEGDNVAAQSANMRWYSGPTLLEVLETVDIQRAVDRQPMRFPVQYVNRPNLDFRGYAGTLASGSVKVGERIKVLPFGVESSVARIVTFDGDKEEACAGEAITLVLNDDIDISRGDLLLAANETLAPARHAAIDVVWMAEQPLAPGQSYDVKLAGKKTRARIEAIRYQIDINNLTQRDVESLPLNGIGLVEMTFDEPLALDIYQQNPVTGGLIFIDRLSNVTVGAGMVRELDERGATPPVEYSAFELELNALVRRHFPHWDARDLLGDKHGAA
>NZ_CP011428.1|WP_001173663.1|3101408_3102014_-|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVAAREQLHGHRGVVLWFTGLSGSGKSTVAGALEEALHQRGVSTYLLDGDNVRHGLCRDLGFSDADRQENIRRVGEVASLMADAGLIVLTAFISPHRAERQLVKERVGHDRFIEIYVNTPLAICEQRDPKGLYKKARAGELRNFTGIDAIYEAPDSPQVHLNGEQLVTNLVSQLLDLLRRRDIIRS
>NZ_CP011428.1|WP_001118109.1|3101034_3101391_-|DUF3561-family-protein
MPGMVKVTGFNMRNSHNITFTRSDAFMVDDDATSAFPGAVVGFVSWLLALGIPFLLYGPNTLFFFLYTWPFFLALMPVSVIIGIALHLLVKGKILFSIMFTLLAVGALFGALFIWLLG
>NZ_CP011428.1|WP_000517480.1|3100532_3100844_-|cell-division-protein-FtsB
MGKLTLLLLALLVWLQYSLWFGKNGIHDYSRVNDDVVAQQATNAKLKARNDQLFAEIDDLNGGQEAIEERARNELSMTKPGETFYRLVPDASKRAATAGQTHR
>NZ_CP011428.1|WP_000741650.1|3099803_3100514_-|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MAATLLDVCAVVPAAGFGRRMQTECPKQYLSIGNKTILEHSVHALLAHPRVTRVVIAISPGDHRFAQLPLANHPQITVVDGGNERADSVLAGLQAVAKAQWVLVHDAARPCLHQDDLARLLAISENSRVGGILASPVRDTMKRGEPGKNAIAHTVERADLWHALTPQFFPRELLYDCLTRALNEGATITDEASALEYCGFHPALVEGRADNIKVTRPEDLALAEFYLTRTIHQEKA
>NZ_CP011428.1|WP_001219245.1|3099324_3099804_-|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDEVNVKATTTEKLGFTGRGEGIACEAVALLMKAAK
>NZ_CP011428.1|WP_000134246.1|3098278_3099328_-|tRNA-pseudouridine(13)-synthase-TruD
MTEFDNLTWLHGKPQGSGLLKANPEDFVVVEDLGFTPDGEGEHILLRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDFSAFQLEGCKVLEYARHKRKLRLGALKGNAFTLVLREISDRRDVETRLQAIRDGGVPNYFGAQRFGIGGSNLQGALRWAQSNAPVRDRNKRSFWLSAARSALFNQIVHQRLKKPDFNQVVDGDALQLAGRGSWFVATSEELPELQRRVDEKELMITASLPGSGEWGTQRAALAFEQDAIAQETVLQSLLLREKVEASRRAMLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTMGDYAHIAE
>NZ_CP011428.1|WP_001221538.1|3097536_3098298_-|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFDNGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLNGYQHYDTAAAVTCALLRGLSREPLRTGRILNVNVPDLPLAQVKGIRVTRCGSRHPADKVIPQEDPRGNTLYWIGPPGDKYDAGPDTDFAAVDEGYVSVTPLHVDLTAHSAHDVVSDWLDSVGVGTQW
>NZ_CP011428.1|WP_001518648.1|3107668_3107962_-|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMVVVVTENVPPRLRGRLAVWLLEVRAGVYVGDTSKRIREMIWQQITQLGGVGNVVMAWATNTESGFEFQTWGENRRIPVDLDGLRLVSFLPVENQ
>NZ_CP011428.1|WP_000144832.1|3107961_3108882_-|type-I-E-CRISPR-associated-endonuclease-Cas1
MTFVPLNPIPLKDRTSMIFLQYGQIDVLDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVRLASTVGTLLVWVGEAGVRVYSSGQPGGARADKLLYQAKLALDDDLRLKVVRKMYELRFREPPPARRSVEQLRGIEGSRVRATYALLAKQYGVKWHGRNYDPKDWEKGDVVNRCISAATSCLYGISEAAILAAGYAPAIGFIHSGKPLSFVYDIADIIKFESVVPKAFEIAARHPAEPDKEVRLACRDIFRSSKLTGKLIPLIEEVLAAGEIEPPQPAPDMLPPAIPEPESLGDSGHRGHG
>NZ_CP011428.1|WP_000281486.1|3108878_3109529_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRITLHTSELSPAQLLHLVERGEYVMHQWLWDLFPGSKERQFLYRREELQGAFRFFVLSQEQPAASAIFDVQTRPFAPTLSAGQTLRFNLRANPTVCKNGKRHDLLMEAKRQRKTQGDSQDIWSYQQQAALTWLARQGEQNGFTLREASVDAYRQQQIRRGKDRQMIQFSSVDYTGVLVINEPALFLQRLAQGFGKSRAFGCGMMMIKPGDDA
>NZ_CP011428.1|WP_000085114.1|3109510_3110257_-|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSQYLVFQLHGPMASWGVDAPGEVRHSHELPSRSALLGLLAAALGIRRDEEERLNAFNRHYQFLLCASGNPRWARDYHTVQMPKEVRKARYFSRREELQDPELLSALISRRDYYTDAWWMIAVSATPDAPYTLAQLQTSLQHPVFPLYLGRKSHPLALPLAPQLLEGSAAGVLREAYRWYQDQFNALKLPLPRLQNECWWEGEHDGLTASKILRRRDMPLSRQQWLFGERSVNQGPWLRKEDACISQE
>NZ_CP011428.1|WP_000206415.1|3110267_3111326_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRISSQSLKRAWRTSELFEQALAGHIGIRTGRIAREAAQILVDSGIDAKKAVEYVKNIANCFGKVKEDKKPKDELTNAETEQLVHISPAEFEAVKALARRLAEEKRPATEEEAELLRHDRMAVDIAMFGRMLAKKTDFNVEAACQVAHAFGVSETIIEDDFFTAVDDLRQASAEDAGAGHLGETGFGSALFYTYICIDKDLLVKNLNDNEELANKTLRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYEPINGTDQLNVAVKRITSLHKNMNKVYGQRTDTASFDVMNQQGSMEDVLDFICA
>NZ_CP011428.1|WP_020837085.1|3111339_3111900_-|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSVVTKDDKATLRQWHEELQEKRGLRASLRRSKTVNDACLAEGLHSLLMQTHSLWKNKAPWNVTALAITAALAAHIKFIDEQKSFAAQLGQKKGADTPVMSKLRFSHLLAVKTPDELLRQLRRAVKLLDGSVNLFSLADDIFCWCQEQNDLLNHHRRQQRPTEFLRIRWALEYYQAGDGDTDNEQD
>NZ_CP011428.1|WP_001145543.1|3116571_3117525_+|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGSKMTWHPELLQESISTLRKEVTGNAQIKTAVYEMMRPAEAPDHPLVEWQDSLTADEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFSEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLT
>NZ_CP011428.1|WP_000080404.1|3117612_3118347_-|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVMALAETNAQLEKLSAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALKELKAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NZ_CP011428.1|WP_001290660.1|3118422_3120135_-|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLSDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAAQKLEPRHAMLLRCRLPGGVITTTQWQAIDKFAADNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGLETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDDKWHLTLFIENGRILDYPGRPLKTGLLEIAKIHQGEFRITANQNLIIASVPESQKAKIETLARDHGLMNAVKPQRENSMACVSFPTCPLAMAEAERFLPSFTDKVEAILEKHGIPDEHIVMRVTGCPNGCGRAMLAEIGLVGKAPGRYNLHLGGNRIGSRIPRMYKENIAEPDILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDFWE
>NZ_CP011428.1|WP_000210927.1|3120134_3121934_-|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit
MTTPAPLTGLLPLNPEQLARLQAATTDLTPEQLAWVSGYFWGVLNPRSGAVAVTPVPERKMPRVTLISASQTGNARRVAEALRDDLLAANLNVTLVNAGDYKFKQIASEKLLVIVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDTSYEFFCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDVLKSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLIATLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGDEPVTVDGKTLPLAEALEWHFELTVNTANIVENYATLTRSESLLPLVGDKAQLQHYAATTPIVDMVRFSPAQLDAQALIDLLRPLTPRLYSIASAQAEVESEVHITVGVVRYDIEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRSFMQQRAAEGVEGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLSRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDARRMAADVEKALLEVIAEFGGMDLESADEYLSELRVERRYQRDVY

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Crispr_ID: NZ_CP011428_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011428_2

3123703-3125196

TypeI-E

I-E

Consensus_repeat	Method
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRISPRCasFinder
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRT
CGGTTTATCCCCGCTGGCGCGGGGAACA	PILER-CR

24 spacers

cse2gr11,cas7,cas5,cas6e

The CRISPR arrays of NZ_CP011428_2

>merge|NZ_CP011428|2|3123703-3125196|CRISPRCasFinder,CRT,PILER-CR
ACGGCTATCCTTGTTGGCGCGGGGAACACATCTTCATATTGCGTGACGCTGCCGATGAACGCGGTTTATCCCCGCTGGCGCGGGGAACACTCTTTATCAGCTAACCATTTCCAGAACTCGTCCGGTTTATCCCTGCTGGCGCGGGGAACACTATAATATGAATTAATTTTTGCGCATAACCTGCGGTTTATCCCCGCTGGCGCGGGGAACACTGCCCGTTCTGCCTCTTCGCACTCTCGATCAACGGTTTATCCCCGCTGGCGCGGGGAACACTGCGTAATGGGCTACCTGAACTTCACATATCCCGGTTTATCCCCGCTAGCGCGGGGAACATATTAAGCGCGCAAAGTTTGGGTTAATTGGACACGGTTTATCCCCGCTGGCGCGGGGAACACCGTATTCGTCACACAGCCCCGTCCAGAAATGACGGTTTATCCCCGCTGGCACGGGGAACACTAACGAACTGAATAAAATGTCAGAAAGTGACGCGGCTTATCCCCGCTGGCGCGGGGAACACGCAGCTTAGCGACGAAATTAAAACCGAACTCACCGGTTTATCCCCGCTGGCGCGGGGAACACTGCCAGTGACTACAGAAGCGTCGCTATCGGGGCGGTTTATCCCCGCTGGCGCGGGGAACACACCGATAAACAACCGCATAGCCTCTTTCGTTTCGATTTATCCCTGCTGGCGCGGGGAACACTGCTCAATAACGTCGTAAATAGCGTAAGCTGGCGGTTTATCCCCGCTGGCGCGGGGAACACTATTTCGCCTTCGGCACTGACGTCACCGTCAACGGTTTATCCCCGCTGGCGCGGGGAACACGTCGCGTTCGTTGCCGGTATAGACCAGCGTCACGGTTTATCCCCGCTGGCGCGGGGAACACATCGAATCGAAACCCCAGCCACAGAAATAATTCGGTTTATCCCCGCTGGCGCGGGGAACACGCTCATGTCAAACGCCATCAGCGTTCCGGCATCGGTTTATCCCCGCTAGCGCGGGGAACACAATCGCCAGCCTCGGAAATATTCCATCCTCCGCGGTTTATCCCCGCTGGCGCGGGGAACACAGGAACTAAACAGCCTGACCGTTGAGGATCTGCGGTTTATCCCCGCTGGCGCGGGGAACACACCGGACAAATCTTTTTTTTCCTGTTCCTGTTCGGTTTATCCCCGCTGGCGCGGGGAACACGGGCGGTCCCCGGCCTCAATACCGCGCTGACGCGGTTTATCCCCGCTGGCGCGGGGAACACTTGAGGTGCCGCTTGCCGTTCTTCTGTTTTTTCGGTTTATCCCCGCTGGCGCGGGGAACACGGGCACTATGAACGGATCGGCGCTGATGCCGGCGGTTTATCCCCGCTGGCGCGGGGAACACGGTAAAGCCACACCATTTTTTATTGACCTCGCCGGTTTATCCCCGCTGGCGCGGGGAACACCTAGGAGGCGTAATGAATACTACGTATCAAAACGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP011428|2|3|3123703-3125196|CRISPRCasFinder
ACGGCTATCCTTGTTGGCGCGGGGAACAC	ATCTTCATATTGCGTGACGCTGCCGATGAACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTTTATCAGCTAACCATTTCCAGAACTCGTC
CGGTTTATCCCTGCTGGCGCGGGGAACAC	TATAATATGAATTAATTTTTGCGCATAACCTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGCCCGTTCTGCCTCTTCGCACTCTCGATCAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGCGTAATGGGCTACCTGAACTTCACATATCC
CGGTTTATCCCCGCTAGCGCGGGGAACAT	ATTAAGCGCGCAAAGTTTGGGTTAATTGGACA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGTATTCGTCACACAGCCCCGTCCAGAAATGA
CGGTTTATCCCCGCTGGCACGGGGAACAC	TAACGAACTGAATAAAATGTCAGAAAGTGACG
CGGCTTATCCCCGCTGGCGCGGGGAACAC	GCAGCTTAGCGACGAAATTAAAACCGAACTCAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGCCAGTGACTACAGAAGCGTCGCTATCGGGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACCGATAAACAACCGCATAGCCTCTTTCGTTT
CGATTTATCCCTGCTGGCGCGGGGAACAC	TGCTCAATAACGTCGTAAATAGCGTAAGCTGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TATTTCGCCTTCGGCACTGACGTCACCGTCAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTCGCGTTCGTTGCCGGTATAGACCAGCGTCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATCGAATCGAAACCCCAGCCACAGAAATAATT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCTCATGTCAAACGCCATCAGCGTTCCGGCAT
CGGTTTATCCCCGCTAGCGCGGGGAACAC	AATCGCCAGCCTCGGAAATATTCCATCCTCCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGGAACTAAACAGCCTGACCGTTGAGGATCTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACCGGACAAATCTTTTTTTTCCTGTTCCTGTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGGCGGTCCCCGGCCTCAATACCGCGCTGACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTGAGGTGCCGCTTGCCGTTCTTCTGTTTTTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGGCACTATGAACGGATCGGCGCTGATGCCGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGTAAAGCCACACCATTTTTTATTGACCTCGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CTAGGAGGCGTAATGAATACTACGTATCAAAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP011428|2|3|3123703-3125196|CRT
ACGGCTATCCTTGTTGGCGCGGGGAACAC	ATCTTCATATTGCGTGACGCTGCCGATGAACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTTTATCAGCTAACCATTTCCAGAACTCGTC
CGGTTTATCCCTGCTGGCGCGGGGAACAC	TATAATATGAATTAATTTTTGCGCATAACCTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGCCCGTTCTGCCTCTTCGCACTCTCGATCAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGCGTAATGGGCTACCTGAACTTCACATATCC
CGGTTTATCCCCGCTAGCGCGGGGAACAT	ATTAAGCGCGCAAAGTTTGGGTTAATTGGACA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGTATTCGTCACACAGCCCCGTCCAGAAATGA
CGGTTTATCCCCGCTGGCACGGGGAACAC	TAACGAACTGAATAAAATGTCAGAAAGTGACG
CGGCTTATCCCCGCTGGCGCGGGGAACAC	GCAGCTTAGCGACGAAATTAAAACCGAACTCAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGCCAGTGACTACAGAAGCGTCGCTATCGGGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACCGATAAACAACCGCATAGCCTCTTTCGTTT
CGATTTATCCCTGCTGGCGCGGGGAACAC	TGCTCAATAACGTCGTAAATAGCGTAAGCTGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TATTTCGCCTTCGGCACTGACGTCACCGTCAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTCGCGTTCGTTGCCGGTATAGACCAGCGTCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATCGAATCGAAACCCCAGCCACAGAAATAATT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCTCATGTCAAACGCCATCAGCGTTCCGGCAT
CGGTTTATCCCCGCTAGCGCGGGGAACAC	AATCGCCAGCCTCGGAAATATTCCATCCTCCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGGAACTAAACAGCCTGACCGTTGAGGATCTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACCGGACAAATCTTTTTTTTCCTGTTCCTGTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGGCGGTCCCCGGCCTCAATACCGCGCTGACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTGAGGTGCCGCTTGCCGTTCTTCTGTTTTTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGGCACTATGAACGGATCGGCGCTGATGCCGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGTAAAGCCACACCATTTTTTATTGACCTCGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CTAGGAGGCGTAATGAATACTACGTATCAAAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP011428|2|2|3123764-3125195|PILER-CR
CGGTTTATCCCCGCTGGCGCGGGGAACA	CTCTTTATCAGCTAACCATTTCCAGAACTCGTC
CGGTTTATCCCTGCTGGCGCGGGGAACA	CTATAATATGAATTAATTTTTGCGCATAACCTG
CGGTTTATCCCCGCTGGCGCGGGGAACA	CTGCCCGTTCTGCCTCTTCGCACTCTCGATCAA
CGGTTTATCCCCGCTGGCGCGGGGAACA	CTGCGTAATGGGCTACCTGAACTTCACATATCC
CGGTTTATCCCCGCTAGCGCGGGGAACA	TATTAAGCGCGCAAAGTTTGGGTTAATTGGACA
CGGTTTATCCCCGCTGGCGCGGGGAACA	CCGTATTCGTCACACAGCCCCGTCCAGAAATGA
CGGTTTATCCCCGCTGGCACGGGGAACA	CTAACGAACTGAATAAAATGTCAGAAAGTGACG
CGGCTTATCCCCGCTGGCGCGGGGAACA	CGCAGCTTAGCGACGAAATTAAAACCGAACTCAC
CGGTTTATCCCCGCTGGCGCGGGGAACA	CTGCCAGTGACTACAGAAGCGTCGCTATCGGGG
CGGTTTATCCCCGCTGGCGCGGGGAACA	CACCGATAAACAACCGCATAGCCTCTTTCGTTT
CGATTTATCCCTGCTGGCGCGGGGAACA	CTGCTCAATAACGTCGTAAATAGCGTAAGCTGG
CGGTTTATCCCCGCTGGCGCGGGGAACA	CTATTTCGCCTTCGGCACTGACGTCACCGTCAA
CGGTTTATCCCCGCTGGCGCGGGGAACA	CGTCGCGTTCGTTGCCGGTATAGACCAGCGTCA
CGGTTTATCCCCGCTGGCGCGGGGAACA	CATCGAATCGAAACCCCAGCCACAGAAATAATT
CGGTTTATCCCCGCTGGCGCGGGGAACA	CGCTCATGTCAAACGCCATCAGCGTTCCGGCAT
CGGTTTATCCCCGCTAGCGCGGGGAACA	CAATCGCCAGCCTCGGAAATATTCCATCCTCCG
CGGTTTATCCCCGCTGGCGCGGGGAACA	CAGGAACTAAACAGCCTGACCGTTGAGGATCTG
CGGTTTATCCCCGCTGGCGCGGGGAACA	CACCGGACAAATCTTTTTTTTCCTGTTCCTGTT
CGGTTTATCCCCGCTGGCGCGGGGAACA	CGGGCGGTCCCCGGCCTCAATACCGCGCTGACG
CGGTTTATCCCCGCTGGCGCGGGGAACA	CTTGAGGTGCCGCTTGCCGTTCTTCTGTTTTTT
CGGTTTATCCCCGCTGGCGCGGGGAACA	CGGGCACTATGAACGGATCGGCGCTGATGCCGG
CGGTTTATCCCCGCTGGCGCGGGGAACA	CGGTAAAGCCACACCATTTTTTATTGACCTCGC
CGGTTTATCCCCGCTGGCGCGGGGAACA	CCTAGGAGGCGTAATGAATACTACGTATCAAAA
CGGTTTATCCCCGCTGGCGCGGGGAACA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011428.1\|WP_000210863.1\|3127680_3129318_-\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437
NZ_CP011428.1\|WP_000036734.1\|3126299_3127598_-\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NZ_CP011428.1\|WP_000080404.1\|3117612_3118347_-\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP011428.1\|WP_000085114.1\|3109510_3110257_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
NZ_CP011428.1\|WP_020837085.1\|3111339_3111900_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NZ_CP011428.1\|WP_000226838.1\|3131815_3134050_-\|GTP-diphosphokinase	unknown	unknown	gnl\|CDD\|182797
NZ_CP011428.1\|WP_001199961.1\|3125492_3126164_-\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
NZ_CP011428.1\|WP_000210927.1\|3120134_3121934_-\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|182862
NZ_CP011428.1\|WP_000046849.1\|3134101_3135397_-\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	unknown	unknown	gnl\|CDD\|237291
NZ_CP011428.1\|WP_001208013.1\|3122807_3123605_-\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|224158
NZ_CP011428.1\|WP_000206415.1\|3110267_3111326_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|273843
NZ_CP011428.1\|WP_000706479.1\|3138254_3139397_-\|glycerate-kinase	unknown	unknown	gnl\|CDD\|224840
NZ_CP011428.1\|WP_000210449.1\|3129545_3130346_-\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
NZ_CP011428.1\|WP_000480218.1\|3131375_3131732_-\|type-II-toxin-antitoxin-system-ParD-family-antitoxin	unknown	unknown	gnl\|CDD\|226136
NZ_CP011428.1\|WP_000186400.1\|3135454_3138211_+\|two-component-sensor-histidine-kinase-BarA	unknown	unknown	gnl\|CDD\|236848
NZ_CP011428.1\|WP_000108313.1\|3122357_3122720_+\|6-carboxytetrahydropterin-synthase-QueD	unknown	unknown	gnl\|CDD\|238264
NZ_CP011428.1\|WP_001290660.1\|3118422_3120135_-\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
NZ_CP011428.1\|WP_001145543.1\|3116571_3117525_+\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
NZ_CP011428.1\|WP_000281486.1\|3108878_3109529_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
NZ_CP011428.1\|WP_024144041.1\|3131113_3131410_-\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl\|CDD\|226194

Protein	Function_ID	Function_description	E-value
NZ_CP011428.1\|WP_000210863.1\|3127680_3129318_-\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_CP011428.1\|WP_000036734.1\|3126299_3127598_-\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NZ_CP011428.1\|WP_000080404.1\|3117612_3118347_-\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	2.40487e-139
NZ_CP011428.1\|WP_000085114.1\|3109510_3110257_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	7.90971e-48
NZ_CP011428.1\|WP_020837085.1\|3111339_3111900_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	3.00753e-33
NZ_CP011428.1\|WP_000226838.1\|3131815_3134050_-\|GTP-diphosphokinase	gnl\|CDD\|182797	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional.	0
NZ_CP011428.1\|WP_001199961.1\|3125492_3126164_-\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	1.43874e-155
NZ_CP011428.1\|WP_000210927.1\|3120134_3121934_-\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
NZ_CP011428.1\|WP_000046849.1\|3134101_3135397_-\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	gnl\|CDD\|237291	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD.	0
NZ_CP011428.1\|WP_001208013.1\|3122807_3123605_-\|MBL-fold-metallo-hydrolase	gnl\|CDD\|224158	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only].	8.44116e-102
NZ_CP011428.1\|WP_000206415.1\|3110267_3111326_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	2.67517e-131
NZ_CP011428.1\|WP_000706479.1\|3138254_3139397_-\|glycerate-kinase	gnl\|CDD\|224840	COG1929, COG1929, Glycerate kinase [Carbohydrate transport and metabolism].	0
NZ_CP011428.1\|WP_000210449.1\|3129545_3130346_-\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	8.52469e-158
NZ_CP011428.1\|WP_000480218.1\|3131375_3131732_-\|type-II-toxin-antitoxin-system-ParD-family-antitoxin	gnl\|CDD\|226136	COG3609, COG3609, Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain [Transcription].	6.12601e-20
NZ_CP011428.1\|WP_000186400.1\|3135454_3138211_+\|two-component-sensor-histidine-kinase-BarA	gnl\|CDD\|236848	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional.	0
NZ_CP011428.1\|WP_000108313.1\|3122357_3122720_+\|6-carboxytetrahydropterin-synthase-QueD	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	2.78454e-58
NZ_CP011428.1\|WP_001290660.1\|3118422_3120135_-\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
NZ_CP011428.1\|WP_001145543.1\|3116571_3117525_+\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
NZ_CP011428.1\|WP_000281486.1\|3108878_3109529_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	1.11215e-74
NZ_CP011428.1\|WP_024144041.1\|3131113_3131410_-\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl\|CDD\|226194	COG3668, ParE, Plasmid stabilization system protein [General function prediction only].	9.62015e-14

>NZ_CP011428.1|WP_001208013.1|3122807_3123605_-|MBL-fold-metallo-hydrolase
MALRIRVLLENHKGAGADKSLKVRPGLSLLVEDESTSILFDTGPDGSFMQNALAMGIDLSDVSAVVLSHGHYDHCGGVPWLPDSSRIICHPDIARERYAAMTFLGITRKIKKLSCEVDYSRYRMMYTRDPLPIGENFIWSGEIPVVAPEAYGIFGGHDAEPDSILDEGVLIYQSTKGLVIITGCGHRGIANIVRHCQNITGIKRIYALVGGFHLRCASPFTLWRVRRFLQEHKPEKLCGCHCTGAWGRLWLPEITAPATGDVLRF
>NZ_CP011428.1|WP_000108313.1|3122357_3122720_+|6-carboxytetrahydropterin-synthase-QueD
MSTTLYKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIMDFADLKAAFKPTYDRLDHYYLNDIPGLSNPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCVYRGE
>NZ_CP011428.1|WP_000210927.1|3120134_3121934_-|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit
MTTPAPLTGLLPLNPEQLARLQAATTDLTPEQLAWVSGYFWGVLNPRSGAVAVTPVPERKMPRVTLISASQTGNARRVAEALRDDLLAANLNVTLVNAGDYKFKQIASEKLLVIVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDTSYEFFCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDVLKSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLIATLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGDEPVTVDGKTLPLAEALEWHFELTVNTANIVENYATLTRSESLLPLVGDKAQLQHYAATTPIVDMVRFSPAQLDAQALIDLLRPLTPRLYSIASAQAEVESEVHITVGVVRYDIEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRSFMQQRAAEGVEGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLSRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDARRMAADVEKALLEVIAEFGGMDLESADEYLSELRVERRYQRDVY
>NZ_CP011428.1|WP_001290660.1|3118422_3120135_-|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLSDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAAQKLEPRHAMLLRCRLPGGVITTTQWQAIDKFAADNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGLETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDDKWHLTLFIENGRILDYPGRPLKTGLLEIAKIHQGEFRITANQNLIIASVPESQKAKIETLARDHGLMNAVKPQRENSMACVSFPTCPLAMAEAERFLPSFTDKVEAILEKHGIPDEHIVMRVTGCPNGCGRAMLAEIGLVGKAPGRYNLHLGGNRIGSRIPRMYKENIAEPDILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDFWE
>NZ_CP011428.1|WP_000080404.1|3117612_3118347_-|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVMALAETNAQLEKLSAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALKELKAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NZ_CP011428.1|WP_001145543.1|3116571_3117525_+|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGSKMTWHPELLQESISTLRKEVTGNAQIKTAVYEMMRPAEAPDHPLVEWQDSLTADEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFSEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLT
>NZ_CP011428.1|WP_020837085.1|3111339_3111900_-|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSVVTKDDKATLRQWHEELQEKRGLRASLRRSKTVNDACLAEGLHSLLMQTHSLWKNKAPWNVTALAITAALAAHIKFIDEQKSFAAQLGQKKGADTPVMSKLRFSHLLAVKTPDELLRQLRRAVKLLDGSVNLFSLADDIFCWCQEQNDLLNHHRRQQRPTEFLRIRWALEYYQAGDGDTDNEQD
>NZ_CP011428.1|WP_000206415.1|3110267_3111326_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRISSQSLKRAWRTSELFEQALAGHIGIRTGRIAREAAQILVDSGIDAKKAVEYVKNIANCFGKVKEDKKPKDELTNAETEQLVHISPAEFEAVKALARRLAEEKRPATEEEAELLRHDRMAVDIAMFGRMLAKKTDFNVEAACQVAHAFGVSETIIEDDFFTAVDDLRQASAEDAGAGHLGETGFGSALFYTYICIDKDLLVKNLNDNEELANKTLRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYEPINGTDQLNVAVKRITSLHKNMNKVYGQRTDTASFDVMNQQGSMEDVLDFICA
>NZ_CP011428.1|WP_000085114.1|3109510_3110257_-|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSQYLVFQLHGPMASWGVDAPGEVRHSHELPSRSALLGLLAAALGIRRDEEERLNAFNRHYQFLLCASGNPRWARDYHTVQMPKEVRKARYFSRREELQDPELLSALISRRDYYTDAWWMIAVSATPDAPYTLAQLQTSLQHPVFPLYLGRKSHPLALPLAPQLLEGSAAGVLREAYRWYQDQFNALKLPLPRLQNECWWEGEHDGLTASKILRRRDMPLSRQQWLFGERSVNQGPWLRKEDACISQE
>NZ_CP011428.1|WP_000281486.1|3108878_3109529_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRITLHTSELSPAQLLHLVERGEYVMHQWLWDLFPGSKERQFLYRREELQGAFRFFVLSQEQPAASAIFDVQTRPFAPTLSAGQTLRFNLRANPTVCKNGKRHDLLMEAKRQRKTQGDSQDIWSYQQQAALTWLARQGEQNGFTLREASVDAYRQQQIRRGKDRQMIQFSSVDYTGVLVINEPALFLQRLAQGFGKSRAFGCGMMMIKPGDDA
>NZ_CP011428.1|WP_001199961.1|3125492_3126164_-|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWDKLSDREVSLFSILAKTKESDKWGAASSEDLLAVINRQGYTARHVVITGGEPCIHDLMPLTDLLEKSGFSCQIETSGTHEVRCTPNTWVTVSPKVNMRGGYDVLSQALERANEIKHPVGRVRDIEALDELLATLSDDKPRVIALQPISQKEDATRLCIETCIARNWRLSMQTHKYLNIA
>NZ_CP011428.1|WP_000036734.1|3126299_3127598_-|phosphopyruvate-hydratase
MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMIDLDGTENKSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKGKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>NZ_CP011428.1|WP_000210863.1|3127680_3129318_-|CTP-synthase-(glutamine-hydrolyzing)
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQLAVDIGREHALFMHLTLVPYLAAAGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISMKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIYEEANPAGEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVTVNIKLIDSQDVETRGVEILKDLDAILIPGGFGYRGVEGKIATARYARENNIPYLGICLGMQVALIEFARNVAGMDNANSTEFVPDCKYPVVALITEWRDEDGNVEVRSEKSDLGGTMRLGAQQCQLSDDSLVRQLYGASTIVERHRHRYEVNNMLLKQIEAAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAANEHQKRQAK
>NZ_CP011428.1|WP_000210449.1|3129545_3130346_-|nucleoside-triphosphate-pyrophosphohydrolase
MTTNHQIDRLLTLMQRLRDPENGCPWDKEQTFASIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFGELSADNSEEALVRWEQIKTEERAQKAQHSALDDIPRSFPALMRAQKIQKRCSNVGFDWTTLGPVVDKVYEEIDEVMFEARQAVVDQAKLEEEMGDLLFATVNMARHLGTKAELALQKANDKFERRFREVERIVAARGLEMTGVDLETMEEVWQEVKRQEIDL
>NZ_CP011428.1|WP_024144041.1|3131113_3131410_-|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MRMVKLTPKASEDLENIWHYGWQHFGEIQADRYINHLSEIFSIMSANNIGTPRPELGEYIYALPFKRHIIYFIQSVTEVIVIRILSQNQDTGKHVNWL
>NZ_CP011428.1|WP_000480218.1|3131375_3131732_-|type-II-toxin-antitoxin-system-ParD-family-antitoxin
MFLTYISFPVYSYVRFILTVEAVMARTMTVDLGDELREFIESLIESGDYRTQSEVIRESLRLLREKQAESRLQALRELLAEGLNSGEPQAWEKDAFLRKVKTGMIKPDENGKINAKGQ
>NZ_CP011428.1|WP_000226838.1|3131815_3134050_-|GTP-diphosphokinase
MVAVRSAHINKAGEFDPKKWIASLGISSQQSCERLAETWAYCLQQTQGHPDADLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSIVTLIHGVRDMAAIRQLNATHNDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKEAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPAEYKRIAKLLHERRLDREHYIEEFVGHLRAEMKNEGVQAEVYGRPKHIYSIWRKMQKKHLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEGAASGGVRSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQIEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNIQAGRQILDDELAHLGISLKEAEKHLLPRYNFNELEELLAAIGGGDIRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKTYAPQNRRKDDGRVVVEGVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPERIVEAVWGESYSAGYSLVVRVQANDRSGLLRDITTILANEKVNVLGVASRSDIKQQIATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLHGG
>NZ_CP011428.1|WP_000046849.1|3134101_3135397_-|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD
MAQFYSAKRRVTTRQIITVKVNDLDSFGQGVARHNGKALFIPGLLPEESAEVIITEDKKQFARARVSRRLNDSPERETPRCPHFGVCGGCQQQHVSIALQQRSKSAALARLMKHEVNDIIAGAPWGYRRRARLSLNCPPDKPLQMGFRKAGSSDIVNVEQCPVLAPQLAALLPRIRACLASLHGTRHLGHVELVQAGSGTLMILRHTAPLSAADKEKLERFSHSEGLSLFLAPFSEILETVSGEAPWYDSHGLRLAFSPRDFIQVNEAVNQQMVARALEWLDVRAEDRVLDLFCGMGNFTLPLATRAASVIGVEGVPALVEKGRENAIRNGLHNVTFFHENLEEDVTKQPWAKNGFDKVLLDPARAGATGVMRHIIKLKPIRIVYVSCNPATLARDSEALVNAGYEVTRLAMLDMFPHTGHLESMVLFERM
>NZ_CP011428.1|WP_000186400.1|3135454_3138211_+|two-component-sensor-histidine-kinase-BarA
MTNYSLRARMMILILAPTVLIGLLLSIFFVVHRYNDLQRQLEDAGASIIEPLAVSSEYGMNLQNRESIGQLISVLHRRHSDIVRAISVYDDHNRLFVTSNFHLDPSQMQLPAGAPFPRRLSVDRHGDIMILRTPIISESYSPDESAIADAKNTKNMLGYVALELDLKSVRLQQYKEIFISSVMMLFCIGIALIFGWRLMRDVTGPIRNMVNTVDRIRRGQLDSRVEGFMLGELDMLKNGINSMAMSLAAYHEEMQHNIDQATSDLRETLEQMEIQNVELDLAKKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKTELNPTQRDHLNTIERSANNLLAIINDVLDFSKLEAGKLILESIPFPLRNTLDEVVTLLAHSSHDKGLELTLNIKNDVPDNVIGDPLRLQQVITNLVGNAIKFTESGNIDILVEKRALSNTKVQIEVQIRDTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMGGDISFHSQPNRGSTFWFHINLDLNPNVIIDGPSTACLAGKRLAYVEPNATAAQCTLDLLSDTPVEVVYSPTFSALPLAHYDIMILSVPVTFREPLTMQHERLAKAASMTDFLLLALPCHAQINAEKLKQGGAAACLLKPLTSTRLLPALTEYCQLNHHPEPLLMDTSKITMTVMAVDDNPANLKLIGALLEDKVQHVELCDSGHQAVDRAKQMQFDLILMDIQMPDMDGIRACELIHQLPHQQQTPVIAVTAHAMAGQKEKLLSAGMNDYLAKPIEEEKLHNLLLRYKPGANVAARLMAPEPAEFIFNPNATLDWQLALRQAAGKPDLARDMLQMLIDFLPEVRNKIEEQLVGENPNGLVDLVHKLHGSCGYSGVPRMKNLCQLIEQQLRSGVHEEELEPEFLELLDEMDNVAREAKKILG
>NZ_CP011428.1|WP_000706479.1|3138254_3139397_-|glycerate-kinase
MKIVIAPDSYKESLSALEVATAIEQGFREIWPDADYLKLPLADGGEGTVEAMVEATAGRIVHVEVTGPLGHRVNAFYGLSGDARSAFIEMAAASGLEQVPPAQRDPLKTTSWGTGELIRHALDAGVEHIIIGIGGSATNDGGAGMVQALGARLRDAQGNDIAQGGIGLETLASIDISGLDKRLSACHIEVACDVTNPLTGKEGASAVFGPQKGATPEMIERLDTALTRYAHLIARDLHVDVLDLAGGGAAGGMGAALYAFCGAQLRRGIEIVTDALHLEACLADADLVITGEGRIDSQTIHGKVPIGVANIAKRYNKPVIGIAGSLTADVSVVHEHGLDAVFSVIYTICTLEDALKNASENVRMTARNVAATLKAGQQLR

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP011428_1	1.31\|3107527\|32\|NZ_CP011428\|PILER-CR	3107527-3107558	32	NZ_CP011428.1	2302579-2302610	0	1.0
NZ_CP011428_1	1.52\|3107512\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107512-3107543	32	NZ_CP011428.1	2302579-2302610	0	1.0

1. spacer 1.31|3107527|32|NZ_CP011428|PILER-CR matches to position: 2302579-2302610, mismatch: 0, identity: 1.0

tgtaacagtccgtcgttaatcagcgcggtggg	CRISPR spacer
tgtaacagtccgtcgttaatcagcgcggtggg	Protospacer
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2. spacer 1.52|3107512|32|NZ_CP011428|CRT,CRISPRCasFinder matches to position: 2302579-2302610, mismatch: 0, identity: 1.0

tgtaacagtccgtcgttaatcagcgcggtggg	CRISPR spacer
tgtaacagtccgtcgttaatcagcgcggtggg	Protospacer
********************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP011428_1	1.13\|3106428\|32\|NZ_CP011428\|PILER-CR	3106428-3106459	32	CP051275	Salmonella phage SW-37, complete genome	24295-24326	1	0.969
NZ_CP011428_1	1.13\|3106428\|32\|NZ_CP011428\|PILER-CR	3106428-3106459	32	KC139516	Salmonella phage FSL SP-016, partial genome	43971-44002	1	0.969
NZ_CP011428_1	1.34\|3106413\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3106413-3106444	32	CP051275	Salmonella phage SW-37, complete genome	24295-24326	1	0.969
NZ_CP011428_1	1.34\|3106413\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3106413-3106444	32	KC139516	Salmonella phage FSL SP-016, partial genome	43971-44002	1	0.969
NZ_CP011428_2	2.5\|3123976\|32\|NZ_CP011428\|CRISPRCasFinder,CRT	3123976-3124007	32	NZ_CP034699	Salmonella enterica subsp. enterica serovar Karamoja strain RSE40 plasmid pRSE40, complete sequence	177960-177991	1	0.969
NZ_CP011428_2	2.5\|3123976\|32\|NZ_CP011428\|CRISPRCasFinder,CRT	3123976-3124007	32	NZ_CP034710	Salmonella enterica subsp. enterica serovar Karamoja strain RSE21 plasmid pRSE21, complete sequence	67131-67162	1	0.969
NZ_CP011428_2	2.11\|3124343\|32\|NZ_CP011428\|CRISPRCasFinder,CRT	3124343-3124374	32	NZ_CP030204	Salmonella enterica strain SA20083530 plasmid pSA20083530.1, complete sequence	130783-130814	2	0.938
NZ_CP011428_2	2.28\|3123975\|33\|NZ_CP011428\|PILER-CR	3123975-3124007	33	NZ_CP034710	Salmonella enterica subsp. enterica serovar Karamoja strain RSE21 plasmid pRSE21, complete sequence	67131-67163	2	0.939
NZ_CP011428_2	2.28\|3123975\|33\|NZ_CP011428\|PILER-CR	3123975-3124007	33	NZ_CP034699	Salmonella enterica subsp. enterica serovar Karamoja strain RSE40 plasmid pRSE40, complete sequence	177959-177991	2	0.939
NZ_CP011428_2	2.34\|3124342\|33\|NZ_CP011428\|PILER-CR	3124342-3124374	33	NZ_CP030204	Salmonella enterica strain SA20083530 plasmid pSA20083530.1, complete sequence	130783-130815	2	0.939
NZ_CP011428_1	1.13\|3106428\|32\|NZ_CP011428\|PILER-CR	3106428-3106459	32	JQ182729	Enterobacterial phage mEp390, complete genome	23951-23982	3	0.906
NZ_CP011428_1	1.34\|3106413\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3106413-3106444	32	JQ182729	Enterobacterial phage mEp390, complete genome	23951-23982	3	0.906
NZ_CP011428_1	1.10\|3106248\|28\|NZ_CP011428\|PILER-CR	3106248-3106275	28	NC_009927	Acaryochloris marina MBIC11017 plasmid pREB2, complete sequence	337987-338014	5	0.821
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	NC_008269	Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence	509804-509835	5	0.844
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	NC_008269	Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence	509804-509835	5	0.844
NZ_CP011428_1	1.15\|3106550\|32\|NZ_CP011428\|PILER-CR	3106550-3106581	32	MT774487	Salmonella phage MG40, complete genome	21746-21777	6	0.812
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	NZ_CP025013	Rhizobium leguminosarum strain Norway plasmid pRLN1, complete sequence	336397-336428	6	0.812
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	NC_019201	Streptomyces sp. x4(2010) plasmid pTSC1, complete sequence	254-285	6	0.812
NZ_CP011428_1	1.36\|3106535\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3106535-3106566	32	MT774487	Salmonella phage MG40, complete genome	21746-21777	6	0.812
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	NZ_CP025013	Rhizobium leguminosarum strain Norway plasmid pRLN1, complete sequence	336397-336428	6	0.812
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	NC_019201	Streptomyces sp. x4(2010) plasmid pTSC1, complete sequence	254-285	6	0.812
NZ_CP011428_2	2.13\|3124465\|32\|NZ_CP011428\|CRISPRCasFinder,CRT	3124465-3124496	32	NC_019849	Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence	850282-850313	6	0.812
NZ_CP011428_2	2.13\|3124465\|32\|NZ_CP011428\|CRISPRCasFinder,CRT	3124465-3124496	32	NC_003078	Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence	887728-887759	6	0.812
NZ_CP011428_2	2.13\|3124465\|32\|NZ_CP011428\|CRISPRCasFinder,CRT	3124465-3124496	32	NZ_CP019586	Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence	856045-856076	6	0.812
NZ_CP011428_2	2.13\|3124465\|32\|NZ_CP011428\|CRISPRCasFinder,CRT	3124465-3124496	32	NC_017326	Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence	835457-835488	6	0.812
NZ_CP011428_2	2.13\|3124465\|32\|NZ_CP011428\|CRISPRCasFinder,CRT	3124465-3124496	32	NZ_CP021799	Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence	953948-953979	6	0.812
NZ_CP011428_2	2.13\|3124465\|32\|NZ_CP011428\|CRISPRCasFinder,CRT	3124465-3124496	32	NC_017323	Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence	431895-431926	6	0.812
NZ_CP011428_2	2.13\|3124465\|32\|NZ_CP011428\|CRISPRCasFinder,CRT	3124465-3124496	32	NZ_CP009146	Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence	843687-843718	6	0.812
NZ_CP011428_2	2.13\|3124465\|32\|NZ_CP011428\|CRISPRCasFinder,CRT	3124465-3124496	32	NC_018701	Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence	833486-833517	6	0.812
NZ_CP011428_2	2.13\|3124465\|32\|NZ_CP011428\|CRISPRCasFinder,CRT	3124465-3124496	32	NZ_CP021828	Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence	457962-457993	6	0.812
NZ_CP011428_2	2.13\|3124465\|32\|NZ_CP011428\|CRISPRCasFinder,CRT	3124465-3124496	32	NZ_CP021802	Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence	1502459-1502490	6	0.812
NZ_CP011428_2	2.13\|3124465\|32\|NZ_CP011428\|CRISPRCasFinder,CRT	3124465-3124496	32	NZ_CP021820	Sinorhizobium meliloti strain M162 plasmid psymB, complete sequence	1188725-1188756	6	0.812
NZ_CP011428_2	2.13\|3124465\|32\|NZ_CP011428\|CRISPRCasFinder,CRT	3124465-3124496	32	NZ_CP021831	Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence	1094940-1094971	6	0.812
NZ_CP011428_2	2.13\|3124465\|32\|NZ_CP011428\|CRISPRCasFinder,CRT	3124465-3124496	32	NZ_CP021823	Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence	574071-574102	6	0.812
NZ_CP011428_2	2.13\|3124465\|32\|NZ_CP011428\|CRISPRCasFinder,CRT	3124465-3124496	32	NZ_CP021814	Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence	758103-758134	6	0.812
NZ_CP011428_2	2.13\|3124465\|32\|NZ_CP011428\|CRISPRCasFinder,CRT	3124465-3124496	32	NZ_CP021795	Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence	92938-92969	6	0.812
NZ_CP011428_2	2.13\|3124465\|32\|NZ_CP011428\|CRISPRCasFinder,CRT	3124465-3124496	32	NZ_CP021810	Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence	1622461-1622492	6	0.812
NZ_CP011428_2	2.13\|3124465\|32\|NZ_CP011428\|CRISPRCasFinder,CRT	3124465-3124496	32	NZ_CP021806	Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence	174090-174121	6	0.812
NZ_CP011428_2	2.13\|3124465\|32\|NZ_CP011428\|CRISPRCasFinder,CRT	3124465-3124496	32	NZ_CP021218	Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence	996227-996258	6	0.812
NZ_CP011428_2	2.13\|3124465\|32\|NZ_CP011428\|CRISPRCasFinder,CRT	3124465-3124496	32	NZ_CP026527	Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence	856529-856560	6	0.812
NZ_CP011428_2	2.13\|3124465\|32\|NZ_CP011428\|CRISPRCasFinder,CRT	3124465-3124496	32	NZ_CP019484	Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence	1026857-1026888	6	0.812
NZ_CP011428_2	2.13\|3124465\|32\|NZ_CP011428\|CRISPRCasFinder,CRT	3124465-3124496	32	NZ_CP019487	Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence	801217-801248	6	0.812
NZ_CP011428_2	2.13\|3124465\|32\|NZ_CP011428\|CRISPRCasFinder,CRT	3124465-3124496	32	NC_020560	Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence	887731-887762	6	0.812
NZ_CP011428_1	1.9\|3106187\|32\|NZ_CP011428\|CRISPRCasFinder,CRT,PILER-CR	3106187-3106218	32	NZ_CP013929	Alteromonas mediterranea strain UM8 plasmid pAMEDUM8_300, complete sequence	188177-188208	7	0.781
NZ_CP011428_1	1.9\|3106187\|32\|NZ_CP011428\|CRISPRCasFinder,CRT,PILER-CR	3106187-3106218	32	CP013931	Alteromonas mediterranea strain U10 plasmid pAMED10_300, complete sequence	192938-192969	7	0.781
NZ_CP011428_1	1.9\|3106187\|32\|NZ_CP011428\|CRISPRCasFinder,CRT,PILER-CR	3106187-3106218	32	NC_019394	Alteromonas mediterranea DE1 plasmid pAMDE1, complete sequence	188204-188235	7	0.781
NZ_CP011428_1	1.15\|3106550\|32\|NZ_CP011428\|PILER-CR	3106550-3106581	32	JQ288021	Salmonella phage SPN3UB, complete genome	39452-39483	7	0.781
NZ_CP011428_1	1.15\|3106550\|32\|NZ_CP011428\|PILER-CR	3106550-3106581	32	MH370364	Salmonella phage S107, complete genome	29959-29990	7	0.781
NZ_CP011428_1	1.15\|3106550\|32\|NZ_CP011428\|PILER-CR	3106550-3106581	32	MH370382	Salmonella phage S135, complete genome	29959-29990	7	0.781
NZ_CP011428_1	1.15\|3106550\|32\|NZ_CP011428\|PILER-CR	3106550-3106581	32	MH370383	Salmonella phage S137, complete genome	29959-29990	7	0.781
NZ_CP011428_1	1.17\|3106672\|32\|NZ_CP011428\|PILER-CR	3106672-3106703	32	NZ_CP054841	Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence	535406-535437	7	0.781
NZ_CP011428_1	1.19\|3106794\|32\|NZ_CP011428\|PILER-CR	3106794-3106825	32	NZ_CP024773	Bacillus thuringiensis LM1212 plasmid pLM2, complete sequence	29048-29079	7	0.781
NZ_CP011428_1	1.19\|3106794\|32\|NZ_CP011428\|PILER-CR	3106794-3106825	32	NZ_CP041075	Bacillus tropicus strain LM1212-W3 plasmid p2, complete sequence	142294-142325	7	0.781
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	MH509446	Gordonia phage DelRio, complete genome	6223-6254	7	0.781
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	MH509446	Gordonia phage DelRio, complete genome	6229-6260	7	0.781
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	MT758688	Mycobacterium phage CELFI, complete genome	74684-74715	7	0.781
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	NC_006363	Nocardia farcinica IFM 10152 plasmid pNF2, complete sequence	85980-86011	7	0.781
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	NZ_LN868942	Nocardia farcinica strain NCTC11134 plasmid 5, complete sequence	39475-39506	7	0.781
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	NZ_CP031420	Nocardia farcinica strain W6977 plasmid unnamed2, complete sequence	10466-10497	7	0.781
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	619925-619956	7	0.781
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	NC_008697	Nocardioides sp. JS614 plasmid pNOCA01, complete sequence	117019-117050	7	0.781
NZ_CP011428_1	1.26\|3107222\|32\|NZ_CP011428\|PILER-CR	3107222-3107253	32	MN693183	Marine virus AFVG_25M360, complete genome	30035-30066	7	0.781
NZ_CP011428_1	1.31\|3107527\|32\|NZ_CP011428\|PILER-CR	3107527-3107558	32	NZ_CP014127	Pantoea vagans strain FDAARGOS_160 plasmid unnamed2, complete sequence	282797-282828	7	0.781
NZ_CP011428_1	1.31\|3107527\|32\|NZ_CP011428\|PILER-CR	3107527-3107558	32	NZ_CP028350	Pantoea vagans strain PV989 plasmid pPV989-508, complete sequence	226270-226301	7	0.781
NZ_CP011428_1	1.31\|3107527\|32\|NZ_CP011428\|PILER-CR	3107527-3107558	32	NC_014258	Pantoea vagans C9-1 plasmid pPag3, complete sequence	345037-345068	7	0.781
NZ_CP011428_1	1.31\|3107527\|32\|NZ_CP011428\|PILER-CR	3107527-3107558	32	NZ_CP038854	Pantoea vagans strain LMG 24199 plasmid unnamed1, complete sequence	185633-185664	7	0.781
NZ_CP011428_1	1.36\|3106535\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3106535-3106566	32	JQ288021	Salmonella phage SPN3UB, complete genome	39452-39483	7	0.781
NZ_CP011428_1	1.36\|3106535\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3106535-3106566	32	MH370364	Salmonella phage S107, complete genome	29959-29990	7	0.781
NZ_CP011428_1	1.36\|3106535\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3106535-3106566	32	MH370382	Salmonella phage S135, complete genome	29959-29990	7	0.781
NZ_CP011428_1	1.36\|3106535\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3106535-3106566	32	MH370383	Salmonella phage S137, complete genome	29959-29990	7	0.781
NZ_CP011428_1	1.38\|3106657\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3106657-3106688	32	NZ_CP054841	Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence	535406-535437	7	0.781
NZ_CP011428_1	1.40\|3106779\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3106779-3106810	32	NZ_CP024773	Bacillus thuringiensis LM1212 plasmid pLM2, complete sequence	29048-29079	7	0.781
NZ_CP011428_1	1.40\|3106779\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3106779-3106810	32	NZ_CP041075	Bacillus tropicus strain LM1212-W3 plasmid p2, complete sequence	142294-142325	7	0.781
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	MH509446	Gordonia phage DelRio, complete genome	6223-6254	7	0.781
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	MH509446	Gordonia phage DelRio, complete genome	6229-6260	7	0.781
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	MT758688	Mycobacterium phage CELFI, complete genome	74684-74715	7	0.781
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	NC_006363	Nocardia farcinica IFM 10152 plasmid pNF2, complete sequence	85980-86011	7	0.781
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	NZ_LN868942	Nocardia farcinica strain NCTC11134 plasmid 5, complete sequence	39475-39506	7	0.781
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	NZ_CP031420	Nocardia farcinica strain W6977 plasmid unnamed2, complete sequence	10466-10497	7	0.781
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	619925-619956	7	0.781
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	NC_008697	Nocardioides sp. JS614 plasmid pNOCA01, complete sequence	117019-117050	7	0.781
NZ_CP011428_1	1.47\|3107207\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107207-3107238	32	MN693183	Marine virus AFVG_25M360, complete genome	30035-30066	7	0.781
NZ_CP011428_1	1.52\|3107512\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107512-3107543	32	NZ_CP014127	Pantoea vagans strain FDAARGOS_160 plasmid unnamed2, complete sequence	282797-282828	7	0.781
NZ_CP011428_1	1.52\|3107512\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107512-3107543	32	NZ_CP028350	Pantoea vagans strain PV989 plasmid pPV989-508, complete sequence	226270-226301	7	0.781
NZ_CP011428_1	1.52\|3107512\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107512-3107543	32	NC_014258	Pantoea vagans C9-1 plasmid pPag3, complete sequence	345037-345068	7	0.781
NZ_CP011428_1	1.52\|3107512\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107512-3107543	32	NZ_CP038854	Pantoea vagans strain LMG 24199 plasmid unnamed1, complete sequence	185633-185664	7	0.781
NZ_CP011428_2	2.13\|3124465\|32\|NZ_CP011428\|CRISPRCasFinder,CRT	3124465-3124496	32	NZ_CP030829	Neorhizobium sp. NCHU2750 plasmid pNCHU2750b, complete sequence	360377-360408	7	0.781
NZ_CP011428_2	2.22\|3125014\|32\|NZ_CP011428\|CRISPRCasFinder,CRT	3125014-3125045	32	NC_011366	Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG202, complete sequence	208454-208485	7	0.781
NZ_CP011428_2	2.22\|3125014\|32\|NZ_CP011428\|CRISPRCasFinder,CRT	3125014-3125045	32	NC_017958	Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence	449563-449594	7	0.781
NZ_CP011428_2	2.22\|3125014\|32\|NZ_CP011428\|CRISPRCasFinder,CRT	3125014-3125045	32	NZ_CP035001	Rhizobium acidisoli strain FH23 plasmid pRapFH23c, complete sequence	167100-167131	7	0.781
NZ_CP011428_2	2.45\|3125013\|33\|NZ_CP011428\|PILER-CR	3125013-3125045	33	NC_011366	Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG202, complete sequence	208454-208486	7	0.788
NZ_CP011428_2	2.45\|3125013\|33\|NZ_CP011428\|PILER-CR	3125013-3125045	33	NZ_CP035001	Rhizobium acidisoli strain FH23 plasmid pRapFH23c, complete sequence	167100-167132	7	0.788
NZ_CP011428_1	1.2\|3105760\|32\|NZ_CP011428\|CRISPRCasFinder,CRT,PILER-CR	3105760-3105791	32	MN855803	Bacteriophage sp. isolate 108, partial genome	10057-10088	8	0.75
NZ_CP011428_1	1.8\|3106126\|32\|NZ_CP011428\|CRISPRCasFinder,CRT,PILER-CR	3106126-3106157	32	NZ_CP016489	Synechococcus sp. PCC 8807 plasmid unnamed6, complete sequence	8862-8893	8	0.75
NZ_CP011428_1	1.8\|3106126\|32\|NZ_CP011428\|CRISPRCasFinder,CRT,PILER-CR	3106126-3106157	32	NZ_CP016476	Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence	151600-151631	8	0.75
NZ_CP011428_1	1.18\|3106733\|32\|NZ_CP011428\|PILER-CR	3106733-3106764	32	NZ_CP016179	Vibrio breoganii strain FF50 plasmid unnamed1, complete sequence	203354-203385	8	0.75
NZ_CP011428_1	1.22\|3106977\|32\|NZ_CP011428\|PILER-CR	3106977-3107008	32	AP013976	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C7-MedDCM-OCT-S26-C28, * SEQUENCING IN PROGRESS *	6246-6277	8	0.75
NZ_CP011428_1	1.22\|3106977\|32\|NZ_CP011428\|PILER-CR	3106977-3107008	32	JX536274	Uncultured Mediterranean phage MEDS5 group fosmid MedDCM-OCT-S15-C5, complete sequence	3959-3990	8	0.75
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	NZ_CP025013	Rhizobium leguminosarum strain Norway plasmid pRLN1, complete sequence	336385-336416	8	0.75
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	NC_008269	Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence	509810-509841	8	0.75
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	JQ807255	Environmental Halophage eHP-36, partial genome	3413-3444	8	0.75
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	MH509446	Gordonia phage DelRio, complete genome	6235-6266	8	0.75
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	619931-619962	8	0.75
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	MK359319	Gordonia phage Parada, complete genome	5938-5969	8	0.75
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	MK359319	Gordonia phage Parada, complete genome	5926-5957	8	0.75
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	MK376958	Gordonia phage Brylie, complete genome	5938-5969	8	0.75
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	MK376958	Gordonia phage Brylie, complete genome	5926-5957	8	0.75
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	MH399781	Gordonia phage Nadeem, complete genome	5938-5969	8	0.75
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	MH399781	Gordonia phage Nadeem, complete genome	5926-5957	8	0.75
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	MK967392	Gordonia phage GrandSlam, complete genome	5971-6002	8	0.75
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	MK967392	Gordonia phage GrandSlam, complete genome	5959-5990	8	0.75
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	MK279893	Gordonia phage WheatThin, complete genome	5938-5969	8	0.75
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	MK279893	Gordonia phage WheatThin, complete genome	5926-5957	8	0.75
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	MT701595	Streptomyces phage Shaeky, complete genome	29602-29633	8	0.75
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	NC_031247	Gordonia phage BetterKatz, complete genome	6191-6222	8	0.75
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	NC_031247	Gordonia phage BetterKatz, complete genome	6179-6210	8	0.75
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	MK305885	Gordonia phage Mulch, complete genome	5938-5969	8	0.75
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	MK305885	Gordonia phage Mulch, complete genome	5926-5957	8	0.75
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	NZ_CP014599	Yangia sp. CCB-MM3 plasmid unnamed3, complete sequence	68312-68343	8	0.75
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	MG269973	TM7 phage DolZOral124_53_65, complete genome	38250-38281	8	0.75
NZ_CP011428_1	1.31\|3107527\|32\|NZ_CP011428\|PILER-CR	3107527-3107558	32	MK524494	Mycobacterium phage Rabbs, complete genome	19994-20025	8	0.75
NZ_CP011428_1	1.31\|3107527\|32\|NZ_CP011428\|PILER-CR	3107527-3107558	32	KX641266	Mycobacterium phage Terror, complete genome	20003-20034	8	0.75
NZ_CP011428_1	1.31\|3107527\|32\|NZ_CP011428\|PILER-CR	3107527-3107558	32	NC_031102	Mycobacterium phage Sneeze, complete genome	19993-20024	8	0.75
NZ_CP011428_1	1.31\|3107527\|32\|NZ_CP011428\|PILER-CR	3107527-3107558	32	KX641265	Mycobacterium phage Taheera, complete genome	20003-20034	8	0.75
NZ_CP011428_1	1.31\|3107527\|32\|NZ_CP011428\|PILER-CR	3107527-3107558	32	NC_014811	Mycolicibacterium gilvum Spyr1 plasmid pMSPYR101, complete sequence	50736-50767	8	0.75
NZ_CP011428_1	1.39\|3106718\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3106718-3106749	32	NZ_CP016179	Vibrio breoganii strain FF50 plasmid unnamed1, complete sequence	203354-203385	8	0.75
NZ_CP011428_1	1.43\|3106962\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3106962-3106993	32	AP013976	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C7-MedDCM-OCT-S26-C28, * SEQUENCING IN PROGRESS *	6246-6277	8	0.75
NZ_CP011428_1	1.43\|3106962\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3106962-3106993	32	JX536274	Uncultured Mediterranean phage MEDS5 group fosmid MedDCM-OCT-S15-C5, complete sequence	3959-3990	8	0.75
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	NZ_CP025013	Rhizobium leguminosarum strain Norway plasmid pRLN1, complete sequence	336385-336416	8	0.75
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	NC_008269	Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence	509810-509841	8	0.75
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	JQ807255	Environmental Halophage eHP-36, partial genome	3413-3444	8	0.75
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	MH509446	Gordonia phage DelRio, complete genome	6235-6266	8	0.75
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	619931-619962	8	0.75
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	MK359319	Gordonia phage Parada, complete genome	5938-5969	8	0.75
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	MK359319	Gordonia phage Parada, complete genome	5926-5957	8	0.75
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	MK376958	Gordonia phage Brylie, complete genome	5938-5969	8	0.75
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	MK376958	Gordonia phage Brylie, complete genome	5926-5957	8	0.75
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	MH399781	Gordonia phage Nadeem, complete genome	5938-5969	8	0.75
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	MH399781	Gordonia phage Nadeem, complete genome	5926-5957	8	0.75
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	MK967392	Gordonia phage GrandSlam, complete genome	5971-6002	8	0.75
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	MK967392	Gordonia phage GrandSlam, complete genome	5959-5990	8	0.75
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	MK279893	Gordonia phage WheatThin, complete genome	5938-5969	8	0.75
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	MK279893	Gordonia phage WheatThin, complete genome	5926-5957	8	0.75
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	MT701595	Streptomyces phage Shaeky, complete genome	29602-29633	8	0.75
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	NC_031247	Gordonia phage BetterKatz, complete genome	6191-6222	8	0.75
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	NC_031247	Gordonia phage BetterKatz, complete genome	6179-6210	8	0.75
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	MK305885	Gordonia phage Mulch, complete genome	5938-5969	8	0.75
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	MK305885	Gordonia phage Mulch, complete genome	5926-5957	8	0.75
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	NZ_CP014599	Yangia sp. CCB-MM3 plasmid unnamed3, complete sequence	68312-68343	8	0.75
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	MG269973	TM7 phage DolZOral124_53_65, complete genome	38250-38281	8	0.75
NZ_CP011428_1	1.52\|3107512\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107512-3107543	32	MK524494	Mycobacterium phage Rabbs, complete genome	19994-20025	8	0.75
NZ_CP011428_1	1.52\|3107512\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107512-3107543	32	KX641266	Mycobacterium phage Terror, complete genome	20003-20034	8	0.75
NZ_CP011428_1	1.52\|3107512\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107512-3107543	32	NC_031102	Mycobacterium phage Sneeze, complete genome	19993-20024	8	0.75
NZ_CP011428_1	1.52\|3107512\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107512-3107543	32	KX641265	Mycobacterium phage Taheera, complete genome	20003-20034	8	0.75
NZ_CP011428_1	1.52\|3107512\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107512-3107543	32	NC_014811	Mycolicibacterium gilvum Spyr1 plasmid pMSPYR101, complete sequence	50736-50767	8	0.75
NZ_CP011428_2	2.8\|3124159\|32\|NZ_CP011428\|CRISPRCasFinder,CRT	3124159-3124190	32	CP024685	Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-1-490K, complete sequence	135469-135500	8	0.75
NZ_CP011428_2	2.8\|3124159\|32\|NZ_CP011428\|CRISPRCasFinder,CRT	3124159-3124190	32	NZ_CP031801	Klebsiella pneumoniae strain MSB1_8A-sc-2280397 plasmid unnamed1, complete sequence	11654-11685	8	0.75
NZ_CP011428_2	2.13\|3124465\|32\|NZ_CP011428\|CRISPRCasFinder,CRT	3124465-3124496	32	NC_012811	Methylorubrum extorquens AM1 megaplasmid, complete sequence	43093-43124	8	0.75
NZ_CP011428_2	2.13\|3124465\|32\|NZ_CP011428\|CRISPRCasFinder,CRT	3124465-3124496	32	NZ_CP053442	Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eD, complete sequence	152052-152083	8	0.75
NZ_CP011428_2	2.14\|3124526\|32\|NZ_CP011428\|CRISPRCasFinder,CRT	3124526-3124557	32	NZ_CP028348	Novosphingobium sp. THN1 plasmid pTHN, complete sequence	1098771-1098802	8	0.75
NZ_CP011428_2	2.14\|3124526\|32\|NZ_CP011428\|CRISPRCasFinder,CRT	3124526-3124557	32	NZ_CP014128	Pantoea vagans strain FDAARGOS_160 plasmid unnamed3, complete sequence	160189-160220	8	0.75
NZ_CP011428_2	2.14\|3124526\|32\|NZ_CP011428\|CRISPRCasFinder,CRT	3124526-3124557	32	NC_014561	Pantoea vagans C9-1 plasmid pPag1, complete sequence	156443-156474	8	0.75
NZ_CP011428_2	2.14\|3124526\|32\|NZ_CP011428\|CRISPRCasFinder,CRT	3124526-3124557	32	NC_010553	Burkholderia ambifaria MC40-6 plasmid pBMC401, complete sequence	137983-138014	8	0.75
NZ_CP011428_2	2.16\|3124648\|32\|NZ_CP011428\|CRISPRCasFinder,CRT	3124648-3124679	32	LQ277707	Sequence 2 from Patent WO2016071503	12422-12453	8	0.75
NZ_CP011428_2	2.16\|3124648\|32\|NZ_CP011428\|CRISPRCasFinder,CRT	3124648-3124679	32	LZ998055	JP 2017534684-A/2: Phage Therapy	12422-12453	8	0.75
NZ_CP011428_2	2.17\|3124709\|32\|NZ_CP011428\|CRISPRCasFinder,CRT	3124709-3124740	32	CP001770	Spirosoma linguale DSM 74 plasmid pSLIN01, complete sequence	145771-145802	8	0.75
NZ_CP011428_2	2.36\|3124464\|33\|NZ_CP011428\|PILER-CR	3124464-3124496	33	NZ_CP030829	Neorhizobium sp. NCHU2750 plasmid pNCHU2750b, complete sequence	360376-360408	8	0.758
NZ_CP011428_2	2.37\|3124525\|33\|NZ_CP011428\|PILER-CR	3124525-3124557	33	NZ_CP014128	Pantoea vagans strain FDAARGOS_160 plasmid unnamed3, complete sequence	160188-160220	8	0.758
NZ_CP011428_2	2.37\|3124525\|33\|NZ_CP011428\|PILER-CR	3124525-3124557	33	NC_014561	Pantoea vagans C9-1 plasmid pPag1, complete sequence	156442-156474	8	0.758
NZ_CP011428_2	2.45\|3125013\|33\|NZ_CP011428\|PILER-CR	3125013-3125045	33	NC_017958	Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence	449563-449595	8	0.758
NZ_CP011428_1	1.15\|3106550\|32\|NZ_CP011428\|PILER-CR	3106550-3106581	32	MK448228	Klebsiella phage ST15-VIM1phi2.1, complete genome	32866-32897	9	0.719
NZ_CP011428_1	1.21\|3106916\|32\|NZ_CP011428\|PILER-CR	3106916-3106947	32	MT162468	Synechococcus phage S-H25, complete genome	69929-69960	9	0.719
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	NZ_CP028537	Enterobacter hormaechei strain SCEH020042 plasmid pQnrB4_020042, complete sequence	45644-45675	9	0.719
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	NZ_AP023191	Escherichia coli strain TUM18530 plasmid pMTY18530-1_lncHI2, complete sequence	47035-47066	9	0.719
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	MN539017	Salmonella sp. strain PJM1 plasmid pPJM1, complete sequence	71637-71668	9	0.719
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	MN539018	Salmonella sp. strain OYZ4 plasmid pOYZ4, complete sequence	121312-121343	9	0.719
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	MT077888	Escherichia coli plasmid p65, complete sequence	47129-47160	9	0.719
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	NC_009838	Escherichia coli APEC O1 plasmid pAPEC-O1-R, complete sequence	46533-46564	9	0.719
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	NZ_CP044306	Escherichia coli strain C27A plasmid pC27A-CTX-M-55, complete sequence	130757-130788	9	0.719
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	NZ_CP039170	Salmonella enterica subsp. enterica serovar Goldcoast strain Sal-5364 plasmid pSal-5364, complete sequence	69620-69651	9	0.719
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	CP048299	Salmonella enterica subsp. enterica serovar Schwarzengrund strain WAPHL_SAL-A00527 plasmid pN1566-2, complete sequence	195977-196008	9	0.719
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	CP048303	Salmonella enterica subsp. enterica serovar Schwarzengrund strain WAPHL-SAL-A00375 plasmid p28945-2, complete sequence	41265-41296	9	0.719
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	NZ_CP037959	Salmonella enterica subsp. enterica serovar Goldcoast strain R18.0877 plasmid pR18.0877_278k, complete sequence	45076-45107	9	0.719
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	NZ_CP039861	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014880 plasmid p16-6773.1, complete sequence	239710-239741	9	0.719
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	NZ_CP048776	Salmonella enterica subsp. enterica serovar Agona strain SG17-135 plasmid pSG17-135-HI2, complete sequence	45076-45107	9	0.719
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	NC_019114	Salmonella enterica subsp. enterica serovar Heidelberg plasmid pSH111_227, complete sequence	43326-43357	9	0.719
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	NZ_AP023198	Escherichia coli strain TUM18780 plasmid pMTY18780-1_lncHI2, complete sequence	47035-47066	9	0.719
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	NZ_CP043223	Salmonella enterica subsp. enterica serovar Bredeney strain SA20114778WT plasmid pET1.1-IncH, complete sequence	5926-5957	9	0.719
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	NZ_CP043223	Salmonella enterica subsp. enterica serovar Bredeney strain SA20114778WT plasmid pET1.1-IncH, complete sequence	240147-240178	9	0.719
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	NZ_CP027411	Salmonella enterica strain FDAARGOS_319 plasmid unnamed, complete sequence	73185-73216	9	0.719
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	JQ807227	Environmental Halophage eHP-6, partial genome	2886-2917	9	0.719
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	619919-619950	9	0.719
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	NC_019201	Streptomyces sp. x4(2010) plasmid pTSC1, complete sequence	248-279	9	0.719
NZ_CP011428_1	1.36\|3106535\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3106535-3106566	32	MK448228	Klebsiella phage ST15-VIM1phi2.1, complete genome	32866-32897	9	0.719
NZ_CP011428_1	1.42\|3106901\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3106901-3106932	32	MT162468	Synechococcus phage S-H25, complete genome	69929-69960	9	0.719
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	NZ_CP028537	Enterobacter hormaechei strain SCEH020042 plasmid pQnrB4_020042, complete sequence	45644-45675	9	0.719
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	NZ_AP023191	Escherichia coli strain TUM18530 plasmid pMTY18530-1_lncHI2, complete sequence	47035-47066	9	0.719
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	MN539017	Salmonella sp. strain PJM1 plasmid pPJM1, complete sequence	71637-71668	9	0.719
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	MN539018	Salmonella sp. strain OYZ4 plasmid pOYZ4, complete sequence	121312-121343	9	0.719
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	MT077888	Escherichia coli plasmid p65, complete sequence	47129-47160	9	0.719
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	NC_009838	Escherichia coli APEC O1 plasmid pAPEC-O1-R, complete sequence	46533-46564	9	0.719
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	NZ_CP044306	Escherichia coli strain C27A plasmid pC27A-CTX-M-55, complete sequence	130757-130788	9	0.719
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	NZ_CP039170	Salmonella enterica subsp. enterica serovar Goldcoast strain Sal-5364 plasmid pSal-5364, complete sequence	69620-69651	9	0.719
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	CP048299	Salmonella enterica subsp. enterica serovar Schwarzengrund strain WAPHL_SAL-A00527 plasmid pN1566-2, complete sequence	195977-196008	9	0.719
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	CP048303	Salmonella enterica subsp. enterica serovar Schwarzengrund strain WAPHL-SAL-A00375 plasmid p28945-2, complete sequence	41265-41296	9	0.719
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	NZ_CP037959	Salmonella enterica subsp. enterica serovar Goldcoast strain R18.0877 plasmid pR18.0877_278k, complete sequence	45076-45107	9	0.719
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	NZ_CP039861	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014880 plasmid p16-6773.1, complete sequence	239710-239741	9	0.719
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	NZ_CP048776	Salmonella enterica subsp. enterica serovar Agona strain SG17-135 plasmid pSG17-135-HI2, complete sequence	45076-45107	9	0.719
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	NC_019114	Salmonella enterica subsp. enterica serovar Heidelberg plasmid pSH111_227, complete sequence	43326-43357	9	0.719
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	NZ_AP023198	Escherichia coli strain TUM18780 plasmid pMTY18780-1_lncHI2, complete sequence	47035-47066	9	0.719
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	NZ_CP043223	Salmonella enterica subsp. enterica serovar Bredeney strain SA20114778WT plasmid pET1.1-IncH, complete sequence	5926-5957	9	0.719
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	NZ_CP043223	Salmonella enterica subsp. enterica serovar Bredeney strain SA20114778WT plasmid pET1.1-IncH, complete sequence	240147-240178	9	0.719
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	NZ_CP027411	Salmonella enterica strain FDAARGOS_319 plasmid unnamed, complete sequence	73185-73216	9	0.719
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	JQ807227	Environmental Halophage eHP-6, partial genome	2886-2917	9	0.719
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	619919-619950	9	0.719
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	NC_019201	Streptomyces sp. x4(2010) plasmid pTSC1, complete sequence	248-279	9	0.719
NZ_CP011428_2	2.10\|3124282\|32\|NZ_CP011428\|CRISPRCasFinder,CRT	3124282-3124313	32	NZ_CP051686	Duganella sp. GN2-R2 plasmid unnamed1, complete sequence	45237-45268	9	0.719
NZ_CP011428_2	2.14\|3124526\|32\|NZ_CP011428\|CRISPRCasFinder,CRT	3124526-3124557	32	NZ_CP045722	Pantoea eucalypti strain LMG 24197 plasmid unnamed2, complete sequence	332-363	9	0.719
NZ_CP011428_2	2.14\|3124526\|32\|NZ_CP011428\|CRISPRCasFinder,CRT	3124526-3124557	32	NZ_CP022519	Pantoea vagans strain FBS135 plasmid pPant3, complete sequence	62976-63007	9	0.719
NZ_CP011428_2	2.14\|3124526\|32\|NZ_CP011428\|CRISPRCasFinder,CRT	3124526-3124557	32	NZ_CP028351	Pantoea vagans strain PV989 plasmid pPV989-167, complete sequence	144976-145007	9	0.719
NZ_CP011428_2	2.18\|3124770\|32\|NZ_CP011428\|CRISPRCasFinder,CRT	3124770-3124801	32	MN062720	Microbacterium phage FuzzBuster, complete genome	19374-19405	9	0.719
NZ_CP011428_2	2.19\|3124831\|32\|NZ_CP011428\|CRISPRCasFinder,CRT	3124831-3124862	32	MN694645	Marine virus AFVG_250M761, complete genome	31050-31081	9	0.719
NZ_CP011428_2	2.22\|3125014\|32\|NZ_CP011428\|CRISPRCasFinder,CRT	3125014-3125045	32	DQ674738	Aeromonas phage phiO18P, complete genome	15707-15738	9	0.719
NZ_CP011428_2	2.22\|3125014\|32\|NZ_CP011428\|CRISPRCasFinder,CRT	3125014-3125045	32	NZ_CP031166	Euzebya sp. DY32-46 plasmid pEDY32-46I, complete sequence	380725-380756	9	0.719
NZ_CP011428_2	2.22\|3125014\|32\|NZ_CP011428\|CRISPRCasFinder,CRT	3125014-3125045	32	NZ_CP022367	Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence	153785-153816	9	0.719
NZ_CP011428_2	2.23\|3125075\|32\|NZ_CP011428\|CRISPRCasFinder,CRT	3125075-3125106	32	MN693046	Marine virus AFVG_25M413, complete genome	4323-4354	9	0.719
NZ_CP011428_2	2.23\|3125075\|32\|NZ_CP011428\|CRISPRCasFinder,CRT	3125075-3125106	32	MN693008	Marine virus AFVG_117M9, complete genome	4316-4347	9	0.719
NZ_CP011428_2	2.31\|3124158\|33\|NZ_CP011428\|PILER-CR	3124158-3124190	33	CP024685	Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-1-490K, complete sequence	135469-135501	9	0.727
NZ_CP011428_2	2.37\|3124525\|33\|NZ_CP011428\|PILER-CR	3124525-3124557	33	NZ_CP045722	Pantoea eucalypti strain LMG 24197 plasmid unnamed2, complete sequence	332-364	9	0.727
NZ_CP011428_2	2.37\|3124525\|33\|NZ_CP011428\|PILER-CR	3124525-3124557	33	NZ_CP022519	Pantoea vagans strain FBS135 plasmid pPant3, complete sequence	62975-63007	9	0.727
NZ_CP011428_2	2.37\|3124525\|33\|NZ_CP011428\|PILER-CR	3124525-3124557	33	NZ_CP028351	Pantoea vagans strain PV989 plasmid pPV989-167, complete sequence	144975-145007	9	0.727
NZ_CP011428_2	2.45\|3125013\|33\|NZ_CP011428\|PILER-CR	3125013-3125045	33	DQ674738	Aeromonas phage phiO18P, complete genome	15707-15739	9	0.727
NZ_CP011428_1	1.1\|3105699\|32\|NZ_CP011428\|CRISPRCasFinder,CRT	3105699-3105730	32	NC_016113	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence	1151729-1151760	10	0.688
NZ_CP011428_1	1.1\|3105699\|32\|NZ_CP011428\|CRISPRCasFinder,CRT	3105699-3105730	32	NC_017585	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence	661429-661460	10	0.688
NZ_CP011428_1	1.13\|3106428\|32\|NZ_CP011428\|PILER-CR	3106428-3106459	32	NZ_AP022571	Mycolicibacterium poriferae strain JCM 12603 plasmid pJCM12603, complete sequence	153476-153507	10	0.688
NZ_CP011428_1	1.21\|3106916\|32\|NZ_CP011428\|PILER-CR	3106916-3106947	32	LN681539	Clostridium phage phiCD505, complete genome	8933-8964	10	0.688
NZ_CP011428_1	1.21\|3106916\|32\|NZ_CP011428\|PILER-CR	3106916-3106947	32	JX145341	Clostridium phage phiMMP02, complete genome	8932-8963	10	0.688
NZ_CP011428_1	1.21\|3106916\|32\|NZ_CP011428\|PILER-CR	3106916-3106947	32	NC_011398	Clostridium phage phiCD27, complete genome	8924-8955	10	0.688
NZ_CP011428_1	1.21\|3106916\|32\|NZ_CP011428\|PILER-CR	3106916-3106947	32	NC_048642	Clostridium phage CDKM9, complete genome	8871-8902	10	0.688
NZ_CP011428_1	1.21\|3106916\|32\|NZ_CP011428\|PILER-CR	3106916-3106947	32	KX228400	Clostridium phage CDKM15, complete genome	9066-9097	10	0.688
NZ_CP011428_1	1.22\|3106977\|32\|NZ_CP011428\|PILER-CR	3106977-3107008	32	NZ_CP020539	Sphingobium herbicidovorans strain MH plasmid pMSHV, complete sequence	53255-53286	10	0.688
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	NZ_KY689633	Escherichia coli strain 100R plasmid p100R, complete sequence	90192-90223	10	0.688
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	NZ_KY689632	Escherichia coli strain 19-M12 plasmid p19M12, complete sequence	93444-93475	10	0.688
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	NZ_CP045446	Salmonella enterica subsp. enterica serovar Schwarzengrund strain 9355 plasmid p280_9355, complete sequence	47441-47472	10	0.688
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	NZ_KU743384	Escherichia coli strain SA26 plasmid pSA26-MCR-1, complete sequence	181822-181853	10	0.688
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	NZ_KU254578	Escherichia coli strain YD786 plasmid pYD786-1, complete sequence	164955-164986	10	0.688
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	NZ_KX129782	Escherichia coli strain S38 plasmid pS38, complete sequence	46429-46460	10	0.688
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	NZ_CP015833	Escherichia coli O157 strain 180-PT54 plasmid unnamed, complete sequence	45081-45112	10	0.688
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	LT221036	Yersinia pseudotuberculosis strain Yps.F1, plasmid pYps.F1 complete sequence	41890-41921	10	0.688
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	CP019195	Salmonella enterica subsp. enterica serovar Senftenberg str. ATCC 43845 plasmid pATCC43845, complete sequence	98508-98539	10	0.688
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	NZ_CP045449	Salmonella enterica subsp. enterica serovar Schwarzengrund strain 12888 plasmid p280_12888, complete sequence	47440-47471	10	0.688
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	NZ_CP015096	Pelagibaca abyssi strain JLT2014 plasmid pPABY8, complete sequence	24746-24777	10	0.688
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	MN732922	Escherichia coli strain 49K plasmid unnamed, complete sequence	70876-70907	10	0.688
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	NZ_CP020493	Salmonella enterica subsp. enterica strain 08-00436 plasmid pSE08-00436-1, complete sequence	47996-48027	10	0.688
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	CP031284	Escherichia fergusonii strain 40A plasmid p280_40A, complete sequence	60929-60960	10	0.688
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	CP042895	Escherichia coli strain CFSAN061772 plasmid pCFSAN061772_02, complete sequence	106230-106261	10	0.688
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	NZ_CP022735	Escherichia coli strain SA186 plasmid pSA186_MCR1, complete sequence	61639-61670	10	0.688
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	CP042898	Escherichia coli strain CFSAN061771 plasmid pCFSAN061771_02, complete sequence	125697-125728	10	0.688
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	NZ_CP022165	Escherichia coli strain M160133 plasmid pM160133_p1, complete sequence	45079-45110	10	0.688
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	NZ_CP012931	Salmonella enterica subsp. enterica serovar Heidelberg strain N13-01290 plasmid pN13-01290_23, complete sequence	119619-119650	10	0.688
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	NZ_CP023143	Escherichia coli strain CFSAN061770 plasmid pEGY1-MCR-1, complete sequence	136443-136474	10	0.688
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	NZ_CP026936	Escherichia coli strain CFS3292 plasmid pCFS3292-1, complete sequence	46428-46459	10	0.688
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	NZ_CP025402	Escherichia coli strain MS8345 plasmid pMS8345A, complete sequence	182643-182674	10	0.688
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	NZ_CP026933	Escherichia coli strain CFS3273 plasmid pCFS3273-1, complete sequence	46278-46309	10	0.688
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	NZ_MH924589	Escherichia coli strain RDB9 plasmid pRDB9, complete sequence	197026-197057	10	0.688
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	NZ_MH208235	Escherichia coli strain APECA2 plasmid pJMA2, complete sequence	166860-166891	10	0.688
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	NZ_MK169211	Escherichia coli strain DUK14-2 plasmid pMOO-32, complete sequence	46091-46122	10	0.688
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	NZ_CP016838	Salmonella enterica subsp. enterica serovar Senftenberg strain 775W (ATCC 43845) plasmid pSSE-ATCC-43845, complete sequence	46820-46851	10	0.688
NZ_CP011428_1	1.23\|3107038\|32\|NZ_CP011428\|PILER-CR	3107038-3107069	32	NZ_CP045074	Paracoccus kondratievae strain BJQ0001 plasmid unnamed1, complete sequence	452410-452441	10	0.688
NZ_CP011428_1	1.34\|3106413\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3106413-3106444	32	NZ_AP022571	Mycolicibacterium poriferae strain JCM 12603 plasmid pJCM12603, complete sequence	153476-153507	10	0.688
NZ_CP011428_1	1.42\|3106901\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3106901-3106932	32	LN681539	Clostridium phage phiCD505, complete genome	8933-8964	10	0.688
NZ_CP011428_1	1.42\|3106901\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3106901-3106932	32	JX145341	Clostridium phage phiMMP02, complete genome	8932-8963	10	0.688
NZ_CP011428_1	1.42\|3106901\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3106901-3106932	32	NC_011398	Clostridium phage phiCD27, complete genome	8924-8955	10	0.688
NZ_CP011428_1	1.42\|3106901\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3106901-3106932	32	NC_048642	Clostridium phage CDKM9, complete genome	8871-8902	10	0.688
NZ_CP011428_1	1.42\|3106901\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3106901-3106932	32	KX228400	Clostridium phage CDKM15, complete genome	9066-9097	10	0.688
NZ_CP011428_1	1.43\|3106962\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3106962-3106993	32	NZ_CP020539	Sphingobium herbicidovorans strain MH plasmid pMSHV, complete sequence	53255-53286	10	0.688
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	NZ_KY689633	Escherichia coli strain 100R plasmid p100R, complete sequence	90192-90223	10	0.688
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	NZ_KY689632	Escherichia coli strain 19-M12 plasmid p19M12, complete sequence	93444-93475	10	0.688
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	NZ_CP045446	Salmonella enterica subsp. enterica serovar Schwarzengrund strain 9355 plasmid p280_9355, complete sequence	47441-47472	10	0.688
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	NZ_KU743384	Escherichia coli strain SA26 plasmid pSA26-MCR-1, complete sequence	181822-181853	10	0.688
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	NZ_KU254578	Escherichia coli strain YD786 plasmid pYD786-1, complete sequence	164955-164986	10	0.688
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	NZ_KX129782	Escherichia coli strain S38 plasmid pS38, complete sequence	46429-46460	10	0.688
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	NZ_CP015833	Escherichia coli O157 strain 180-PT54 plasmid unnamed, complete sequence	45081-45112	10	0.688
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	LT221036	Yersinia pseudotuberculosis strain Yps.F1, plasmid pYps.F1 complete sequence	41890-41921	10	0.688
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	CP019195	Salmonella enterica subsp. enterica serovar Senftenberg str. ATCC 43845 plasmid pATCC43845, complete sequence	98508-98539	10	0.688
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	NZ_CP045449	Salmonella enterica subsp. enterica serovar Schwarzengrund strain 12888 plasmid p280_12888, complete sequence	47440-47471	10	0.688
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	NZ_CP015096	Pelagibaca abyssi strain JLT2014 plasmid pPABY8, complete sequence	24746-24777	10	0.688
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	MN732922	Escherichia coli strain 49K plasmid unnamed, complete sequence	70876-70907	10	0.688
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	NZ_CP020493	Salmonella enterica subsp. enterica strain 08-00436 plasmid pSE08-00436-1, complete sequence	47996-48027	10	0.688
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	CP031284	Escherichia fergusonii strain 40A plasmid p280_40A, complete sequence	60929-60960	10	0.688
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	CP042895	Escherichia coli strain CFSAN061772 plasmid pCFSAN061772_02, complete sequence	106230-106261	10	0.688
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	NZ_CP022735	Escherichia coli strain SA186 plasmid pSA186_MCR1, complete sequence	61639-61670	10	0.688
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	CP042898	Escherichia coli strain CFSAN061771 plasmid pCFSAN061771_02, complete sequence	125697-125728	10	0.688
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	NZ_CP022165	Escherichia coli strain M160133 plasmid pM160133_p1, complete sequence	45079-45110	10	0.688
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	NZ_CP012931	Salmonella enterica subsp. enterica serovar Heidelberg strain N13-01290 plasmid pN13-01290_23, complete sequence	119619-119650	10	0.688
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	NZ_CP023143	Escherichia coli strain CFSAN061770 plasmid pEGY1-MCR-1, complete sequence	136443-136474	10	0.688
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	NZ_CP026936	Escherichia coli strain CFS3292 plasmid pCFS3292-1, complete sequence	46428-46459	10	0.688
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	NZ_CP025402	Escherichia coli strain MS8345 plasmid pMS8345A, complete sequence	182643-182674	10	0.688
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	NZ_CP026933	Escherichia coli strain CFS3273 plasmid pCFS3273-1, complete sequence	46278-46309	10	0.688
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	NZ_MH924589	Escherichia coli strain RDB9 plasmid pRDB9, complete sequence	197026-197057	10	0.688
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	NZ_MH208235	Escherichia coli strain APECA2 plasmid pJMA2, complete sequence	166860-166891	10	0.688
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	NZ_MK169211	Escherichia coli strain DUK14-2 plasmid pMOO-32, complete sequence	46091-46122	10	0.688
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	NZ_CP016838	Salmonella enterica subsp. enterica serovar Senftenberg strain 775W (ATCC 43845) plasmid pSSE-ATCC-43845, complete sequence	46820-46851	10	0.688
NZ_CP011428_1	1.44\|3107023\|32\|NZ_CP011428\|CRT,CRISPRCasFinder	3107023-3107054	32	NZ_CP045074	Paracoccus kondratievae strain BJQ0001 plasmid unnamed1, complete sequence	452410-452441	10	0.688
NZ_CP011428_2	2.1\|3123732\|32\|NZ_CP011428\|CRISPRCasFinder,CRT	3123732-3123763	32	NZ_CP054615	Azospirillum oryzae strain KACC 14407 plasmid unnamed1, complete sequence	146919-146950	10	0.688
NZ_CP011428_2	2.4\|3123915\|32\|NZ_CP011428\|CRISPRCasFinder,CRT	3123915-3123946	32	NZ_CP044072	Pseudomonas oryzihabitans strain FDAARGOS_657 plasmid unnamed1, complete sequence	99817-99848	10	0.688
NZ_CP011428_2	2.18\|3124770\|32\|NZ_CP011428\|CRISPRCasFinder,CRT	3124770-3124801	32	NZ_CP019257	Escherichia coli strain 13TMH22 plasmid p13TMH22-1, complete sequence	20006-20037	10	0.688
NZ_CP011428_2	2.18\|3124770\|32\|NZ_CP011428\|CRISPRCasFinder,CRT	3124770-3124801	32	NZ_CP019274	Escherichia coli strain 13P477T plasmid p13P477T-1, complete sequence	9024-9055	10	0.688
NZ_CP011428_2	2.18\|3124770\|32\|NZ_CP011428\|CRISPRCasFinder,CRT	3124770-3124801	32	NZ_CP019275	Escherichia coli strain 13P477T plasmid p13P477T-2, complete sequence	27130-27161	10	0.688
NZ_CP011428_2	2.18\|3124770\|32\|NZ_CP011428\|CRISPRCasFinder,CRT	3124770-3124801	32	NZ_CP019279	Escherichia coli strain 13P477T plasmid p13P477T-6, complete sequence	19363-19394	10	0.688
NZ_CP011428_2	2.18\|3124770\|32\|NZ_CP011428\|CRISPRCasFinder,CRT	3124770-3124801	32	NZ_CP019246	Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence	23427-23458	10	0.688
NZ_CP011428_2	2.18\|3124770\|32\|NZ_CP011428\|CRISPRCasFinder,CRT	3124770-3124801	32	NC_049342	Escherichia phage 500465-1, complete genome	24342-24373	10	0.688
NZ_CP011428_2	2.18\|3124770\|32\|NZ_CP011428\|CRISPRCasFinder,CRT	3124770-3124801	32	KY271398	Klebsiella phage 4 LV-2017, complete genome	28240-28271	10	0.688
NZ_CP011428_2	2.18\|3124770\|32\|NZ_CP011428\|CRISPRCasFinder,CRT	3124770-3124801	32	CP025900	Escherichia phage sp., complete genome	24342-24373	10	0.688
NZ_CP011428_2	2.33\|3124281\|33\|NZ_CP011428\|PILER-CR	3124281-3124313	33	NZ_CP051686	Duganella sp. GN2-R2 plasmid unnamed1, complete sequence	45237-45269	10	0.697
NZ_CP011428_2	2.46\|3125074\|33\|NZ_CP011428\|PILER-CR	3125074-3125106	33	MN693046	Marine virus AFVG_25M413, complete genome	4322-4354	10	0.697
NZ_CP011428_2	2.46\|3125074\|33\|NZ_CP011428\|PILER-CR	3125074-3125106	33	MN693008	Marine virus AFVG_117M9, complete genome	4315-4347	10	0.697
NZ_CP011428_2	2.22\|3125014\|32\|NZ_CP011428\|CRISPRCasFinder,CRT	3125014-3125045	32	NZ_CP054036	Rhizobium sp. JKLM13E plasmid pPR13E05, complete sequence	234768-234799	11	0.656
NZ_CP011428_2	2.22\|3125014\|32\|NZ_CP011428\|CRISPRCasFinder,CRT	3125014-3125045	32	NZ_CP022568	Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK04, complete sequence	299431-299462	11	0.656

1. spacer 1.13|3106428|32|NZ_CP011428|PILER-CR matches to CP051275 (Salmonella phage SW-37, complete genome) position: , mismatch: 1, identity: 0.969

tggaccgatggggccaacatcgccgaacgtgg	CRISPR spacer
cggaccgatggggccaacatcgccgaacgtgg	Protospacer
.*******************************

2. spacer 1.13|3106428|32|NZ_CP011428|PILER-CR matches to KC139516 (Salmonella phage FSL SP-016, partial genome) position: , mismatch: 1, identity: 0.969

tggaccgatggggccaacatcgccgaacgtgg	CRISPR spacer
tggaccgatggggccaacatcgccgaatgtgg	Protospacer
***************************.****

3. spacer 1.34|3106413|32|NZ_CP011428|CRT,CRISPRCasFinder matches to CP051275 (Salmonella phage SW-37, complete genome) position: , mismatch: 1, identity: 0.969

tggaccgatggggccaacatcgccgaacgtgg	CRISPR spacer
cggaccgatggggccaacatcgccgaacgtgg	Protospacer
.*******************************

4. spacer 1.34|3106413|32|NZ_CP011428|CRT,CRISPRCasFinder matches to KC139516 (Salmonella phage FSL SP-016, partial genome) position: , mismatch: 1, identity: 0.969

tggaccgatggggccaacatcgccgaacgtgg	CRISPR spacer
tggaccgatggggccaacatcgccgaatgtgg	Protospacer
***************************.****

5. spacer 2.5|3123976|32|NZ_CP011428|CRISPRCasFinder,CRT matches to NZ_CP034699 (Salmonella enterica subsp. enterica serovar Karamoja strain RSE40 plasmid pRSE40, complete sequence) position: , mismatch: 1, identity: 0.969

tgcgtaatgggctacctgaacttcacatatcc	CRISPR spacer
tgcgtagtgggctacctgaacttcacatatcc	Protospacer
******.*************************

6. spacer 2.5|3123976|32|NZ_CP011428|CRISPRCasFinder,CRT matches to NZ_CP034710 (Salmonella enterica subsp. enterica serovar Karamoja strain RSE21 plasmid pRSE21, complete sequence) position: , mismatch: 1, identity: 0.969

tgcgtaatgggctacctgaacttcacatatcc	CRISPR spacer
tgcgtagtgggctacctgaacttcacatatcc	Protospacer
******.*************************

7. spacer 2.11|3124343|32|NZ_CP011428|CRISPRCasFinder,CRT matches to NZ_CP030204 (Salmonella enterica strain SA20083530 plasmid pSA20083530.1, complete sequence) position: , mismatch: 2, identity: 0.938

accgataaacaaccgcatagcctctttcgttt	CRISPR spacer
accgataaacaatcgcatggcctctttcgttt	Protospacer
************.*****.*************

8. spacer 2.28|3123975|33|NZ_CP011428|PILER-CR matches to NZ_CP034710 (Salmonella enterica subsp. enterica serovar Karamoja strain RSE21 plasmid pRSE21, complete sequence) position: , mismatch: 2, identity: 0.939

ctgcgtaatgggctacctgaacttcacatatcc	CRISPR spacer
atgcgtagtgggctacctgaacttcacatatcc	Protospacer
 ******.*************************

9. spacer 2.28|3123975|33|NZ_CP011428|PILER-CR matches to NZ_CP034699 (Salmonella enterica subsp. enterica serovar Karamoja strain RSE40 plasmid pRSE40, complete sequence) position: , mismatch: 2, identity: 0.939

ctgcgtaatgggctacctgaacttcacatatcc	CRISPR spacer
atgcgtagtgggctacctgaacttcacatatcc	Protospacer
 ******.*************************

10. spacer 2.34|3124342|33|NZ_CP011428|PILER-CR matches to NZ_CP030204 (Salmonella enterica strain SA20083530 plasmid pSA20083530.1, complete sequence) position: , mismatch: 2, identity: 0.939

caccgataaacaaccgcatagcctctttcgttt	CRISPR spacer
caccgataaacaatcgcatggcctctttcgttt	Protospacer
*************.*****.*************

11. spacer 1.13|3106428|32|NZ_CP011428|PILER-CR matches to JQ182729 (Enterobacterial phage mEp390, complete genome) position: , mismatch: 3, identity: 0.906

tggaccgatggggccaacatcgccgaacgtgg	CRISPR spacer
tggacctatggggccaacatcaccgaacgtag	Protospacer
****** **************.********.*

12. spacer 1.34|3106413|32|NZ_CP011428|CRT,CRISPRCasFinder matches to JQ182729 (Enterobacterial phage mEp390, complete genome) position: , mismatch: 3, identity: 0.906

tggaccgatggggccaacatcgccgaacgtgg	CRISPR spacer
tggacctatggggccaacatcaccgaacgtag	Protospacer
****** **************.********.*

13. spacer 1.10|3106248|28|NZ_CP011428|PILER-CR matches to NC_009927 (Acaryochloris marina MBIC11017 plasmid pREB2, complete sequence) position: , mismatch: 5, identity: 0.821

gatcgagtaacgtgcgctggaacgcgtc	CRISPR spacer
gattgaggaacgtgcgctggaacgatta	Protospacer
***.*** ****************  *

14. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to NC_008269 (Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence) position: , mismatch: 5, identity: 0.844

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tctgggtctcggtctcggtctcggttgtctgg	Protospacer
*** ********************* **   *

15. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to NC_008269 (Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence) position: , mismatch: 5, identity: 0.844

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tctgggtctcggtctcggtctcggttgtctgg	Protospacer
*** ********************* **   *

16. spacer 1.15|3106550|32|NZ_CP011428|PILER-CR matches to MT774487 (Salmonella phage MG40, complete genome) position: , mismatch: 6, identity: 0.812

ccagaaagtgccggtagtgcctgatgaacgac	CRISPR spacer
ccagccagtgccggtagtgcctgatgaaatgg	Protospacer
****  **********************  .

17. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to NZ_CP025013 (Rhizobium leguminosarum strain Norway plasmid pRLN1, complete sequence) position: , mismatch: 6, identity: 0.812

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tctcggtctcggtctcggtctcggtctcggtc	Protospacer
*************************  .*..

18. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to NC_019201 (Streptomyces sp. x4(2010) plasmid pTSC1, complete sequence) position: , mismatch: 6, identity: 0.812

tctcggtctcggtctcggtctcg-gtagtgacg	CRISPR spacer
tctcagtctcggtctcagtctcgcgtgggggc-	Protospacer
****.***********.****** **.* *.*

19. spacer 1.36|3106535|32|NZ_CP011428|CRT,CRISPRCasFinder matches to MT774487 (Salmonella phage MG40, complete genome) position: , mismatch: 6, identity: 0.812

ccagaaagtgccggtagtgcctgatgaacgac	CRISPR spacer
ccagccagtgccggtagtgcctgatgaaatgg	Protospacer
****  **********************  .

20. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to NZ_CP025013 (Rhizobium leguminosarum strain Norway plasmid pRLN1, complete sequence) position: , mismatch: 6, identity: 0.812

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tctcggtctcggtctcggtctcggtctcggtc	Protospacer
*************************  .*..

21. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to NC_019201 (Streptomyces sp. x4(2010) plasmid pTSC1, complete sequence) position: , mismatch: 6, identity: 0.812

tctcggtctcggtctcggtctcg-gtagtgacg	CRISPR spacer
tctcagtctcggtctcagtctcgcgtgggggc-	Protospacer
****.***********.****** **.* *.*

22. spacer 2.13|3124465|32|NZ_CP011428|CRISPRCasFinder,CRT matches to NC_019849 (Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.*************

23. spacer 2.13|3124465|32|NZ_CP011428|CRISPRCasFinder,CRT matches to NC_003078 (Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.*************

24. spacer 2.13|3124465|32|NZ_CP011428|CRISPRCasFinder,CRT matches to NZ_CP019586 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.*************

25. spacer 2.13|3124465|32|NZ_CP011428|CRISPRCasFinder,CRT matches to NC_017326 (Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.*************

26. spacer 2.13|3124465|32|NZ_CP011428|CRISPRCasFinder,CRT matches to NZ_CP021799 (Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.*************

27. spacer 2.13|3124465|32|NZ_CP011428|CRISPRCasFinder,CRT matches to NC_017323 (Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.*************

28. spacer 2.13|3124465|32|NZ_CP011428|CRISPRCasFinder,CRT matches to NZ_CP009146 (Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.*************

29. spacer 2.13|3124465|32|NZ_CP011428|CRISPRCasFinder,CRT matches to NC_018701 (Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.*************

30. spacer 2.13|3124465|32|NZ_CP011428|CRISPRCasFinder,CRT matches to NZ_CP021828 (Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.*************

31. spacer 2.13|3124465|32|NZ_CP011428|CRISPRCasFinder,CRT matches to NZ_CP021802 (Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.*************

32. spacer 2.13|3124465|32|NZ_CP011428|CRISPRCasFinder,CRT matches to NZ_CP021820 (Sinorhizobium meliloti strain M162 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.*************

33. spacer 2.13|3124465|32|NZ_CP011428|CRISPRCasFinder,CRT matches to NZ_CP021831 (Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.*************

34. spacer 2.13|3124465|32|NZ_CP011428|CRISPRCasFinder,CRT matches to NZ_CP021823 (Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.*************

35. spacer 2.13|3124465|32|NZ_CP011428|CRISPRCasFinder,CRT matches to NZ_CP021814 (Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.*************

36. spacer 2.13|3124465|32|NZ_CP011428|CRISPRCasFinder,CRT matches to NZ_CP021795 (Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.*************

37. spacer 2.13|3124465|32|NZ_CP011428|CRISPRCasFinder,CRT matches to NZ_CP021810 (Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.*************

38. spacer 2.13|3124465|32|NZ_CP011428|CRISPRCasFinder,CRT matches to NZ_CP021806 (Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.*************

39. spacer 2.13|3124465|32|NZ_CP011428|CRISPRCasFinder,CRT matches to NZ_CP021218 (Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.*************

40. spacer 2.13|3124465|32|NZ_CP011428|CRISPRCasFinder,CRT matches to NZ_CP026527 (Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.*************

41. spacer 2.13|3124465|32|NZ_CP011428|CRISPRCasFinder,CRT matches to NZ_CP019484 (Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.*************

42. spacer 2.13|3124465|32|NZ_CP011428|CRISPRCasFinder,CRT matches to NZ_CP019487 (Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.*************

43. spacer 2.13|3124465|32|NZ_CP011428|CRISPRCasFinder,CRT matches to NC_020560 (Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.*************

44. spacer 1.9|3106187|32|NZ_CP011428|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013929 (Alteromonas mediterranea strain UM8 plasmid pAMEDUM8_300, complete sequence) position: , mismatch: 7, identity: 0.781

aatcact--gcgggggtatttagcggaaacggct	CRISPR spacer
--tcgctgcgcgggggtatttagcgaaatcgggg	Protospacer
  **.**  ****************.** ***

45. spacer 1.9|3106187|32|NZ_CP011428|CRISPRCasFinder,CRT,PILER-CR matches to CP013931 (Alteromonas mediterranea strain U10 plasmid pAMED10_300, complete sequence) position: , mismatch: 7, identity: 0.781

aatcact--gcgggggtatttagcggaaacggct	CRISPR spacer
--tcgctgcgcgggggtatttagcgaaatcgggg	Protospacer
  **.**  ****************.** ***

46. spacer 1.9|3106187|32|NZ_CP011428|CRISPRCasFinder,CRT,PILER-CR matches to NC_019394 (Alteromonas mediterranea DE1 plasmid pAMDE1, complete sequence) position: , mismatch: 7, identity: 0.781

aatcact--gcgggggtatttagcggaaacggct	CRISPR spacer
--tcgctgcgcgggggtatttagcgaaatcgggg	Protospacer
  **.**  ****************.** ***

47. spacer 1.15|3106550|32|NZ_CP011428|PILER-CR matches to JQ288021 (Salmonella phage SPN3UB, complete genome) position: , mismatch: 7, identity: 0.781

ccagaaagtgccggtagtgcctgatgaacgac	CRISPR spacer
gcagccagtgccggtagtgcctgatgaaatgg	Protospacer
 ***  **********************  .

48. spacer 1.15|3106550|32|NZ_CP011428|PILER-CR matches to MH370364 (Salmonella phage S107, complete genome) position: , mismatch: 7, identity: 0.781

ccagaaagtgccggtagtgcctgatgaacgac	CRISPR spacer
gcagccagtgccggtagtgcctgatgaaatgg	Protospacer
 ***  **********************  .

49. spacer 1.15|3106550|32|NZ_CP011428|PILER-CR matches to MH370382 (Salmonella phage S135, complete genome) position: , mismatch: 7, identity: 0.781

ccagaaagtgccggtagtgcctgatgaacgac	CRISPR spacer
gcagccagtgccggtagtgcctgatgaaatgg	Protospacer
 ***  **********************  .

50. spacer 1.15|3106550|32|NZ_CP011428|PILER-CR matches to MH370383 (Salmonella phage S137, complete genome) position: , mismatch: 7, identity: 0.781

ccagaaagtgccggtagtgcctgatgaacgac	CRISPR spacer
gcagccagtgccggtagtgcctgatgaaatgg	Protospacer
 ***  **********************  .

51. spacer 1.17|3106672|32|NZ_CP011428|PILER-CR matches to NZ_CP054841 (Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

ggcagcgggcgaggcaaacacattcggggcgt	CRISPR spacer
gccacggcgcgaggcaaacacattcaggtcgc	Protospacer
* **  * *****************.** **.

52. spacer 1.19|3106794|32|NZ_CP011428|PILER-CR matches to NZ_CP024773 (Bacillus thuringiensis LM1212 plasmid pLM2, complete sequence) position: , mismatch: 7, identity: 0.781

gaatctaatgcaacagatgaataaacacgtaa	CRISPR spacer
gcttctaatgcaatagatgaagaaacaccaat	Protospacer
*  **********.******* ******  *

53. spacer 1.19|3106794|32|NZ_CP011428|PILER-CR matches to NZ_CP041075 (Bacillus tropicus strain LM1212-W3 plasmid p2, complete sequence) position: , mismatch: 7, identity: 0.781

gaatctaatgcaacagatgaataaacacgtaa	CRISPR spacer
gcttctaatgcaatagatgaagaaacaccaat	Protospacer
*  **********.******* ******  *

54. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to MH509446 (Gordonia phage DelRio, complete genome) position: , mismatch: 7, identity: 0.781

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tttcggtctcggtcgcggtctcggtgccctcg	Protospacer
*.************ **********. .  **

55. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to MH509446 (Gordonia phage DelRio, complete genome) position: , mismatch: 7, identity: 0.781

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tctcggtttcggtctcggtcgcggtctcggtg	Protospacer
*******.************ ****  .*..*

56. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to MT758688 (Mycobacterium phage CELFI, complete genome) position: , mismatch: 7, identity: 0.781

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tctcggtcccggtcccggtctcggtcccgttg	Protospacer
********.*****.**********  .* .*

57. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to NC_006363 (Nocardia farcinica IFM 10152 plasmid pNF2, complete sequence) position: , mismatch: 7, identity: 0.781

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
gctcgatctcggtcgcggtctcggtgcggatg	Protospacer
 ****.******** **********.  **.*

58. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to NZ_LN868942 (Nocardia farcinica strain NCTC11134 plasmid 5, complete sequence) position: , mismatch: 7, identity: 0.781

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
gctcgatctcggtcgcggtctcggtgcggatg	Protospacer
 ****.******** **********.  **.*

59. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to NZ_CP031420 (Nocardia farcinica strain W6977 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
gctcgatctcggtcgcggtctcggtgcggatg	Protospacer
 ****.******** **********.  **.*

60. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 7, identity: 0.781

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tctcggcctcggcctcggtctcggcctcggcg	Protospacer
******.*****.***********.  .*.**

61. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to NC_008697 (Nocardioides sp. JS614 plasmid pNOCA01, complete sequence) position: , mismatch: 7, identity: 0.781

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
cctcggcctcggcctcggtctcggcggcggcg	Protospacer
.*****.*****.***********..*.*.**

62. spacer 1.26|3107222|32|NZ_CP011428|PILER-CR matches to MN693183 (Marine virus AFVG_25M360, complete genome) position: , mismatch: 7, identity: 0.781

agccggcgc-gagcctggagggttgaataatgg	CRISPR spacer
-gcggattcagagtttggagggttgaataatgg	Protospacer
 ** *.. * ***..******************

63. spacer 1.31|3107527|32|NZ_CP011428|PILER-CR matches to NZ_CP014127 (Pantoea vagans strain FDAARGOS_160 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781

tgtaacagtccgtcgttaatcagcgcggtggg	CRISPR spacer
cgatacagtccggcgttaatcagcccggtgcc	Protospacer
.*  ******** *********** *****

64. spacer 1.31|3107527|32|NZ_CP011428|PILER-CR matches to NZ_CP028350 (Pantoea vagans strain PV989 plasmid pPV989-508, complete sequence) position: , mismatch: 7, identity: 0.781

tgtaacagtccgtcgttaatcagcgcggtggg	CRISPR spacer
cgatacagtccggcgttaatcagcccggtgcc	Protospacer
.*  ******** *********** *****

65. spacer 1.31|3107527|32|NZ_CP011428|PILER-CR matches to NC_014258 (Pantoea vagans C9-1 plasmid pPag3, complete sequence) position: , mismatch: 7, identity: 0.781

tgtaacagtccgtcgttaatcagcgcggtggg	CRISPR spacer
cgatacagtccggcgttaatcagcccggtgcc	Protospacer
.*  ******** *********** *****

66. spacer 1.31|3107527|32|NZ_CP011428|PILER-CR matches to NZ_CP038854 (Pantoea vagans strain LMG 24199 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

tgtaacagtccgtcgttaatcagcgcggtggg	CRISPR spacer
cgatacagtccggcgttaatcagcccggtgcc	Protospacer
.*  ******** *********** *****

67. spacer 1.36|3106535|32|NZ_CP011428|CRT,CRISPRCasFinder matches to JQ288021 (Salmonella phage SPN3UB, complete genome) position: , mismatch: 7, identity: 0.781

ccagaaagtgccggtagtgcctgatgaacgac	CRISPR spacer
gcagccagtgccggtagtgcctgatgaaatgg	Protospacer
 ***  **********************  .

68. spacer 1.36|3106535|32|NZ_CP011428|CRT,CRISPRCasFinder matches to MH370364 (Salmonella phage S107, complete genome) position: , mismatch: 7, identity: 0.781

ccagaaagtgccggtagtgcctgatgaacgac	CRISPR spacer
gcagccagtgccggtagtgcctgatgaaatgg	Protospacer
 ***  **********************  .

69. spacer 1.36|3106535|32|NZ_CP011428|CRT,CRISPRCasFinder matches to MH370382 (Salmonella phage S135, complete genome) position: , mismatch: 7, identity: 0.781

ccagaaagtgccggtagtgcctgatgaacgac	CRISPR spacer
gcagccagtgccggtagtgcctgatgaaatgg	Protospacer
 ***  **********************  .

70. spacer 1.36|3106535|32|NZ_CP011428|CRT,CRISPRCasFinder matches to MH370383 (Salmonella phage S137, complete genome) position: , mismatch: 7, identity: 0.781

ccagaaagtgccggtagtgcctgatgaacgac	CRISPR spacer
gcagccagtgccggtagtgcctgatgaaatgg	Protospacer
 ***  **********************  .

71. spacer 1.38|3106657|32|NZ_CP011428|CRT,CRISPRCasFinder matches to NZ_CP054841 (Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

ggcagcgggcgaggcaaacacattcggggcgt	CRISPR spacer
gccacggcgcgaggcaaacacattcaggtcgc	Protospacer
* **  * *****************.** **.

72. spacer 1.40|3106779|32|NZ_CP011428|CRT,CRISPRCasFinder matches to NZ_CP024773 (Bacillus thuringiensis LM1212 plasmid pLM2, complete sequence) position: , mismatch: 7, identity: 0.781

gaatctaatgcaacagatgaataaacacgtaa	CRISPR spacer
gcttctaatgcaatagatgaagaaacaccaat	Protospacer
*  **********.******* ******  *

73. spacer 1.40|3106779|32|NZ_CP011428|CRT,CRISPRCasFinder matches to NZ_CP041075 (Bacillus tropicus strain LM1212-W3 plasmid p2, complete sequence) position: , mismatch: 7, identity: 0.781

gaatctaatgcaacagatgaataaacacgtaa	CRISPR spacer
gcttctaatgcaatagatgaagaaacaccaat	Protospacer
*  **********.******* ******  *

74. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to MH509446 (Gordonia phage DelRio, complete genome) position: , mismatch: 7, identity: 0.781

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tttcggtctcggtcgcggtctcggtgccctcg	Protospacer
*.************ **********. .  **

75. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to MH509446 (Gordonia phage DelRio, complete genome) position: , mismatch: 7, identity: 0.781

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tctcggtttcggtctcggtcgcggtctcggtg	Protospacer
*******.************ ****  .*..*

76. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to MT758688 (Mycobacterium phage CELFI, complete genome) position: , mismatch: 7, identity: 0.781

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tctcggtcccggtcccggtctcggtcccgttg	Protospacer
********.*****.**********  .* .*

77. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to NC_006363 (Nocardia farcinica IFM 10152 plasmid pNF2, complete sequence) position: , mismatch: 7, identity: 0.781

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
gctcgatctcggtcgcggtctcggtgcggatg	Protospacer
 ****.******** **********.  **.*

78. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to NZ_LN868942 (Nocardia farcinica strain NCTC11134 plasmid 5, complete sequence) position: , mismatch: 7, identity: 0.781

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
gctcgatctcggtcgcggtctcggtgcggatg	Protospacer
 ****.******** **********.  **.*

79. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to NZ_CP031420 (Nocardia farcinica strain W6977 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
gctcgatctcggtcgcggtctcggtgcggatg	Protospacer
 ****.******** **********.  **.*

80. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 7, identity: 0.781

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tctcggcctcggcctcggtctcggcctcggcg	Protospacer
******.*****.***********.  .*.**

81. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to NC_008697 (Nocardioides sp. JS614 plasmid pNOCA01, complete sequence) position: , mismatch: 7, identity: 0.781

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
cctcggcctcggcctcggtctcggcggcggcg	Protospacer
.*****.*****.***********..*.*.**

82. spacer 1.47|3107207|32|NZ_CP011428|CRT,CRISPRCasFinder matches to MN693183 (Marine virus AFVG_25M360, complete genome) position: , mismatch: 7, identity: 0.781

agccggcgc-gagcctggagggttgaataatgg	CRISPR spacer
-gcggattcagagtttggagggttgaataatgg	Protospacer
 ** *.. * ***..******************

83. spacer 1.52|3107512|32|NZ_CP011428|CRT,CRISPRCasFinder matches to NZ_CP014127 (Pantoea vagans strain FDAARGOS_160 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781

tgtaacagtccgtcgttaatcagcgcggtggg	CRISPR spacer
cgatacagtccggcgttaatcagcccggtgcc	Protospacer
.*  ******** *********** *****

84. spacer 1.52|3107512|32|NZ_CP011428|CRT,CRISPRCasFinder matches to NZ_CP028350 (Pantoea vagans strain PV989 plasmid pPV989-508, complete sequence) position: , mismatch: 7, identity: 0.781

tgtaacagtccgtcgttaatcagcgcggtggg	CRISPR spacer
cgatacagtccggcgttaatcagcccggtgcc	Protospacer
.*  ******** *********** *****

85. spacer 1.52|3107512|32|NZ_CP011428|CRT,CRISPRCasFinder matches to NC_014258 (Pantoea vagans C9-1 plasmid pPag3, complete sequence) position: , mismatch: 7, identity: 0.781

tgtaacagtccgtcgttaatcagcgcggtggg	CRISPR spacer
cgatacagtccggcgttaatcagcccggtgcc	Protospacer
.*  ******** *********** *****

86. spacer 1.52|3107512|32|NZ_CP011428|CRT,CRISPRCasFinder matches to NZ_CP038854 (Pantoea vagans strain LMG 24199 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

tgtaacagtccgtcgttaatcagcgcggtggg	CRISPR spacer
cgatacagtccggcgttaatcagcccggtgcc	Protospacer
.*  ******** *********** *****

87. spacer 2.13|3124465|32|NZ_CP011428|CRISPRCasFinder,CRT matches to NZ_CP030829 (Neorhizobium sp. NCHU2750 plasmid pNCHU2750b, complete sequence) position: , mismatch: 7, identity: 0.781

tatttcgccttcggcactgacgtcaccgtcaa	CRISPR spacer
tacgtcgccttcggcaatgtcgtcaccgaaga	Protospacer
**. ************ ** ********  .*

88. spacer 2.22|3125014|32|NZ_CP011428|CRISPRCasFinder,CRT matches to NC_011366 (Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG202, complete sequence) position: , mismatch: 7, identity: 0.781

---gggcactatgaacggatcggcgctgatgccgg	CRISPR spacer
ttcgagc---atgaccggatcggcgctggtgccga	Protospacer
   *.**   **** *************.*****.

89. spacer 2.22|3125014|32|NZ_CP011428|CRISPRCasFinder,CRT matches to NC_017958 (Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence) position: , mismatch: 7, identity: 0.781

gggcactatgaacggatcggcgctgatgccgg	CRISPR spacer
ggcggcggtgaaaggatcggcggtgatgccgg	Protospacer
**  .* .**** ********* *********

90. spacer 2.22|3125014|32|NZ_CP011428|CRISPRCasFinder,CRT matches to NZ_CP035001 (Rhizobium acidisoli strain FH23 plasmid pRapFH23c, complete sequence) position: , mismatch: 7, identity: 0.781

---gggcactatgaacggatcggcgctgatgccgg	CRISPR spacer
ttcgagc---atgaccggatcggcgctggtgccga	Protospacer
   *.**   **** *************.*****.

91. spacer 2.45|3125013|33|NZ_CP011428|PILER-CR matches to NC_011366 (Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG202, complete sequence) position: , mismatch: 7, identity: 0.788

---cgggcactatgaacggatcggcgctgatgccgg	CRISPR spacer
cttcgagc---atgaccggatcggcgctggtgccga	Protospacer
   **.**   **** *************.*****.

92. spacer 2.45|3125013|33|NZ_CP011428|PILER-CR matches to NZ_CP035001 (Rhizobium acidisoli strain FH23 plasmid pRapFH23c, complete sequence) position: , mismatch: 7, identity: 0.788

---cgggcactatgaacggatcggcgctgatgccgg	CRISPR spacer
cttcgagc---atgaccggatcggcgctggtgccga	Protospacer
   **.**   **** *************.*****.

93. spacer 1.2|3105760|32|NZ_CP011428|CRISPRCasFinder,CRT,PILER-CR matches to MN855803 (Bacteriophage sp. isolate 108, partial genome) position: , mismatch: 8, identity: 0.75

gcgaaatagtggggaaaaacccctggttaacc	CRISPR spacer
tttcaatattggggaaaaacccctcgttacct	Protospacer
 .  **** *************** **** *.

94. spacer 1.8|3106126|32|NZ_CP011428|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016489 (Synechococcus sp. PCC 8807 plasmid unnamed6, complete sequence) position: , mismatch: 8, identity: 0.75

tatccacatatacccgcaatcatattcaagaa	CRISPR spacer
ggtaaatctaaacccgcaatcatattcaagag	Protospacer
 .*  *. ** ********************.

95. spacer 1.8|3106126|32|NZ_CP011428|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016476 (Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

tatccacatatacccgcaatcatattcaagaa	CRISPR spacer
ggtaaatctaaacccgcaatcatattcaagag	Protospacer
 .*  *. ** ********************.

96. spacer 1.18|3106733|32|NZ_CP011428|PILER-CR matches to NZ_CP016179 (Vibrio breoganii strain FF50 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ggtaatttctcatctaacagcct-----gtacgcctc	CRISPR spacer
ggtaatttcgcatcaaacagccttattagtat-----	Protospacer
********* **** ********     ***.

97. spacer 1.22|3106977|32|NZ_CP011428|PILER-CR matches to AP013976 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C7-MedDCM-OCT-S26-C28, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.75

cgttgcgtcaggttgatccagtgcgtcagcgg	CRISPR spacer
agttgcgccagcttgatccagtgctgatgcgt	Protospacer
 ******.*** ************    ***

98. spacer 1.22|3106977|32|NZ_CP011428|PILER-CR matches to JX536274 (Uncultured Mediterranean phage MEDS5 group fosmid MedDCM-OCT-S15-C5, complete sequence) position: , mismatch: 8, identity: 0.75

cgttgcgtcaggttgatccagtgcgtcagcgg	CRISPR spacer
agttgcgccagcttgatccagtgctgatgcgt	Protospacer
 ******.*** ************    ***

99. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to NZ_CP025013 (Rhizobium leguminosarum strain Norway plasmid pRLN1, complete sequence) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tctcggtctcggtctcggtctcgacgacgctt	Protospacer
***********************.....* .

100. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to NC_008269 (Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence) position: , mismatch: 8, identity: 0.75

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
actgggtctgggtctcggtctcggtctcggtt------	Protospacer
      *** *********************

101. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to JQ807255 (Environmental Halophage eHP-36, partial genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
catcggtctcggtctcggtctcggttccagtg	Protospacer
. ***********************  ....*

102. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to MH509446 (Gordonia phage DelRio, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
actccgtctcggtttcggtctcggtcgcggtc	Protospacer
 *** ********.*********** *.*..

103. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
cctcggtctcggcctcggcctcggtctcggcc	Protospacer
.***********.*****.******  .*.*

104. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to MK359319 (Gordonia phage Parada, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
actccgtctcggtttcggtctcggtcgaggtc	Protospacer
 *** ********.*********** * *..

105. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to MK359319 (Gordonia phage Parada, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tttcggtctcggtcgaggtctcggtgccctcg	Protospacer
*.************  *********. .  **

106. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to MK376958 (Gordonia phage Brylie, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
actccgtctcggtttcggtctcggtcgaggtc	Protospacer
 *** ********.*********** * *..

107. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to MK376958 (Gordonia phage Brylie, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tttcggtctcggtcgaggtctcggtgccctcg	Protospacer
*.************  *********. .  **

108. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to MH399781 (Gordonia phage Nadeem, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
actccgtctcggtttcggtctcggtcgaggtc	Protospacer
 *** ********.*********** * *..

109. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to MH399781 (Gordonia phage Nadeem, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tttcggtctcggtcgaggtctcggtgccctcg	Protospacer
*.************  *********. .  **

110. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to MK967392 (Gordonia phage GrandSlam, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
actccgtctcggtttcggtctcggtcgaggtc	Protospacer
 *** ********.*********** * *..

111. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to MK967392 (Gordonia phage GrandSlam, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tttcggtctcggtcgaggtctcggtgccctcg	Protospacer
*.************  *********. .  **

112. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to MK279893 (Gordonia phage WheatThin, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
actccgtctcggtttcggtctcggtcgaggtc	Protospacer
 *** ********.*********** * *..

113. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to MK279893 (Gordonia phage WheatThin, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tttcggtctcggtcgaggtctcggtgccctcg	Protospacer
*.************  *********. .  **

114. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to MT701595 (Streptomyces phage Shaeky, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
cctcggcctcggcctcggtctcggtgtcctcg	Protospacer
.*****.*****.************. .  **

115. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to NC_031247 (Gordonia phage BetterKatz, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
actccgtctcggtttcggtctcggtcgaggtc	Protospacer
 *** ********.*********** * *..

116. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to NC_031247 (Gordonia phage BetterKatz, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tttcggtctcggtcgaggtctcggtgccttcg	Protospacer
*.************  *********. .  **

117. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to MK305885 (Gordonia phage Mulch, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
actccgtctcggtttcggtctcggtcgaggtc	Protospacer
 *** ********.*********** * *..

118. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to MK305885 (Gordonia phage Mulch, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tttcggtctcggtcgaggtctcggtgccctcg	Protospacer
*.************  *********. .  **

119. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to NZ_CP014599 (Yangia sp. CCB-MM3 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attccgtctcggtctcggtcttggtgctgtag	Protospacer
 .** ****************.***. **  *

120. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to MG269973 (TM7 phage DolZOral124_53_65, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg-----	CRISPR spacer
gctcggtctcggtttcggtttcg-----gacgcttgt	Protospacer
 ************.*****.***     ****

121. spacer 1.31|3107527|32|NZ_CP011428|PILER-CR matches to MK524494 (Mycobacterium phage Rabbs, complete genome) position: , mismatch: 8, identity: 0.75

tgtaacagtccgtcgttaatcagcgcggtggg	CRISPR spacer
cccaacagtccgtcgttgaccagcgcgatatg	Protospacer
. .**************.*.*******.*. *

122. spacer 1.31|3107527|32|NZ_CP011428|PILER-CR matches to KX641266 (Mycobacterium phage Terror, complete genome) position: , mismatch: 8, identity: 0.75

tgtaacagtccgtcgttaatcagcgcggtggg	CRISPR spacer
cccaacagtccgtcgttgaccagcgcgatatg	Protospacer
. .**************.*.*******.*. *

123. spacer 1.31|3107527|32|NZ_CP011428|PILER-CR matches to NC_031102 (Mycobacterium phage Sneeze, complete genome) position: , mismatch: 8, identity: 0.75

tgtaacagtccgtcgttaatcagcgcggtggg	CRISPR spacer
cccaacagtccgtcgttgaccagcgcgatatg	Protospacer
. .**************.*.*******.*. *

124. spacer 1.31|3107527|32|NZ_CP011428|PILER-CR matches to KX641265 (Mycobacterium phage Taheera, complete genome) position: , mismatch: 8, identity: 0.75

tgtaacagtccgtcgttaatcagcgcggtggg	CRISPR spacer
cccaacagtccgtcgttgaccagcgcgatatg	Protospacer
. .**************.*.*******.*. *

125. spacer 1.31|3107527|32|NZ_CP011428|PILER-CR matches to NC_014811 (Mycolicibacterium gilvum Spyr1 plasmid pMSPYR101, complete sequence) position: , mismatch: 8, identity: 0.75

tgtaacagtccgtcgttaatcagcgcggtggg	CRISPR spacer
agggagactccggcgttgatcagcgcggtggc	Protospacer
 * .* * **** ****.*************

126. spacer 1.39|3106718|32|NZ_CP011428|CRT,CRISPRCasFinder matches to NZ_CP016179 (Vibrio breoganii strain FF50 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ggtaatttctcatctaacagcct-----gtacgcctc	CRISPR spacer
ggtaatttcgcatcaaacagccttattagtat-----	Protospacer
********* **** ********     ***.

127. spacer 1.43|3106962|32|NZ_CP011428|CRT,CRISPRCasFinder matches to AP013976 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C7-MedDCM-OCT-S26-C28, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.75

cgttgcgtcaggttgatccagtgcgtcagcgg	CRISPR spacer
agttgcgccagcttgatccagtgctgatgcgt	Protospacer
 ******.*** ************    ***

128. spacer 1.43|3106962|32|NZ_CP011428|CRT,CRISPRCasFinder matches to JX536274 (Uncultured Mediterranean phage MEDS5 group fosmid MedDCM-OCT-S15-C5, complete sequence) position: , mismatch: 8, identity: 0.75

cgttgcgtcaggttgatccagtgcgtcagcgg	CRISPR spacer
agttgcgccagcttgatccagtgctgatgcgt	Protospacer
 ******.*** ************    ***

129. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to NZ_CP025013 (Rhizobium leguminosarum strain Norway plasmid pRLN1, complete sequence) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tctcggtctcggtctcggtctcgacgacgctt	Protospacer
***********************.....* .

130. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to NC_008269 (Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence) position: , mismatch: 8, identity: 0.75

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
actgggtctgggtctcggtctcggtctcggtt------	Protospacer
      *** *********************

131. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to JQ807255 (Environmental Halophage eHP-36, partial genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
catcggtctcggtctcggtctcggttccagtg	Protospacer
. ***********************  ....*

132. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to MH509446 (Gordonia phage DelRio, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
actccgtctcggtttcggtctcggtcgcggtc	Protospacer
 *** ********.*********** *.*..

133. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
cctcggtctcggcctcggcctcggtctcggcc	Protospacer
.***********.*****.******  .*.*

134. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to MK359319 (Gordonia phage Parada, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
actccgtctcggtttcggtctcggtcgaggtc	Protospacer
 *** ********.*********** * *..

135. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to MK359319 (Gordonia phage Parada, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tttcggtctcggtcgaggtctcggtgccctcg	Protospacer
*.************  *********. .  **

136. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to MK376958 (Gordonia phage Brylie, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
actccgtctcggtttcggtctcggtcgaggtc	Protospacer
 *** ********.*********** * *..

137. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to MK376958 (Gordonia phage Brylie, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tttcggtctcggtcgaggtctcggtgccctcg	Protospacer
*.************  *********. .  **

138. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to MH399781 (Gordonia phage Nadeem, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
actccgtctcggtttcggtctcggtcgaggtc	Protospacer
 *** ********.*********** * *..

139. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to MH399781 (Gordonia phage Nadeem, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tttcggtctcggtcgaggtctcggtgccctcg	Protospacer
*.************  *********. .  **

140. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to MK967392 (Gordonia phage GrandSlam, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
actccgtctcggtttcggtctcggtcgaggtc	Protospacer
 *** ********.*********** * *..

141. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to MK967392 (Gordonia phage GrandSlam, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tttcggtctcggtcgaggtctcggtgccctcg	Protospacer
*.************  *********. .  **

142. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to MK279893 (Gordonia phage WheatThin, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
actccgtctcggtttcggtctcggtcgaggtc	Protospacer
 *** ********.*********** * *..

143. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to MK279893 (Gordonia phage WheatThin, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tttcggtctcggtcgaggtctcggtgccctcg	Protospacer
*.************  *********. .  **

144. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to MT701595 (Streptomyces phage Shaeky, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
cctcggcctcggcctcggtctcggtgtcctcg	Protospacer
.*****.*****.************. .  **

145. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to NC_031247 (Gordonia phage BetterKatz, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
actccgtctcggtttcggtctcggtcgaggtc	Protospacer
 *** ********.*********** * *..

146. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to NC_031247 (Gordonia phage BetterKatz, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tttcggtctcggtcgaggtctcggtgccttcg	Protospacer
*.************  *********. .  **

147. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to MK305885 (Gordonia phage Mulch, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
actccgtctcggtttcggtctcggtcgaggtc	Protospacer
 *** ********.*********** * *..

148. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to MK305885 (Gordonia phage Mulch, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tttcggtctcggtcgaggtctcggtgccctcg	Protospacer
*.************  *********. .  **

149. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to NZ_CP014599 (Yangia sp. CCB-MM3 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attccgtctcggtctcggtcttggtgctgtag	Protospacer
 .** ****************.***. **  *

150. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to MG269973 (TM7 phage DolZOral124_53_65, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg-----	CRISPR spacer
gctcggtctcggtttcggtttcg-----gacgcttgt	Protospacer
 ************.*****.***     ****

151. spacer 1.52|3107512|32|NZ_CP011428|CRT,CRISPRCasFinder matches to MK524494 (Mycobacterium phage Rabbs, complete genome) position: , mismatch: 8, identity: 0.75

tgtaacagtccgtcgttaatcagcgcggtggg	CRISPR spacer
cccaacagtccgtcgttgaccagcgcgatatg	Protospacer
. .**************.*.*******.*. *

152. spacer 1.52|3107512|32|NZ_CP011428|CRT,CRISPRCasFinder matches to KX641266 (Mycobacterium phage Terror, complete genome) position: , mismatch: 8, identity: 0.75

tgtaacagtccgtcgttaatcagcgcggtggg	CRISPR spacer
cccaacagtccgtcgttgaccagcgcgatatg	Protospacer
. .**************.*.*******.*. *

153. spacer 1.52|3107512|32|NZ_CP011428|CRT,CRISPRCasFinder matches to NC_031102 (Mycobacterium phage Sneeze, complete genome) position: , mismatch: 8, identity: 0.75

tgtaacagtccgtcgttaatcagcgcggtggg	CRISPR spacer
cccaacagtccgtcgttgaccagcgcgatatg	Protospacer
. .**************.*.*******.*. *

154. spacer 1.52|3107512|32|NZ_CP011428|CRT,CRISPRCasFinder matches to KX641265 (Mycobacterium phage Taheera, complete genome) position: , mismatch: 8, identity: 0.75

tgtaacagtccgtcgttaatcagcgcggtggg	CRISPR spacer
cccaacagtccgtcgttgaccagcgcgatatg	Protospacer
. .**************.*.*******.*. *

155. spacer 1.52|3107512|32|NZ_CP011428|CRT,CRISPRCasFinder matches to NC_014811 (Mycolicibacterium gilvum Spyr1 plasmid pMSPYR101, complete sequence) position: , mismatch: 8, identity: 0.75

tgtaacagtccgtcgttaatcagcgcggtggg	CRISPR spacer
agggagactccggcgttgatcagcgcggtggc	Protospacer
 * .* * **** ****.*************

156. spacer 2.8|3124159|32|NZ_CP011428|CRISPRCasFinder,CRT matches to CP024685 (Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-1-490K, complete sequence) position: , mismatch: 8, identity: 0.75

taacgaactgaataaaatgtcagaaagtgacg	CRISPR spacer
ggcagaactgaataaaatgtctgatagtgaat	Protospacer
 .  ***************** ** *****

157. spacer 2.8|3124159|32|NZ_CP011428|CRISPRCasFinder,CRT matches to NZ_CP031801 (Klebsiella pneumoniae strain MSB1_8A-sc-2280397 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

taacgaactgaataaaatgtcagaaagtgacg	CRISPR spacer
aaatgaactgaatacaatgtcagacacgcgcg	Protospacer
 **.********** ********* *   .**

158. spacer 2.13|3124465|32|NZ_CP011428|CRISPRCasFinder,CRT matches to NC_012811 (Methylorubrum extorquens AM1 megaplasmid, complete sequence) position: , mismatch: 8, identity: 0.75

tatttcgccttcggcactgacgtcaccgtcaa	CRISPR spacer
tcgaacaccttcgtcacggacgtcaccgtcga	Protospacer
*    *.****** *** ************.*

159. spacer 2.13|3124465|32|NZ_CP011428|CRISPRCasFinder,CRT matches to NZ_CP053442 (Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eD, complete sequence) position: , mismatch: 8, identity: 0.75

tatttcgccttcggcactgacgtcaccgtcaa	CRISPR spacer
cattgcgccttcggcacggacgtccaccagaa	Protospacer
.*** ************ ******  *   **

160. spacer 2.14|3124526|32|NZ_CP011428|CRISPRCasFinder,CRT matches to NZ_CP028348 (Novosphingobium sp. THN1 plasmid pTHN, complete sequence) position: , mismatch: 8, identity: 0.75

-gtcgcgttcgttgccggtatagaccagcgtca	CRISPR spacer
cagcggatcc-ttgccggtatagaccagcgtat	Protospacer
 . ** .*.* ********************

161. spacer 2.14|3124526|32|NZ_CP011428|CRISPRCasFinder,CRT matches to NZ_CP014128 (Pantoea vagans strain FDAARGOS_160 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.75

gtcgcgttcgttgccggtatagaccagcgtca	CRISPR spacer
gaattttacgttgccggtgtagaccagtgtca	Protospacer
*   . * **********.********.****

162. spacer 2.14|3124526|32|NZ_CP011428|CRISPRCasFinder,CRT matches to NC_014561 (Pantoea vagans C9-1 plasmid pPag1, complete sequence) position: , mismatch: 8, identity: 0.75

gtcgcgttcgttgccggtatagaccagcgtca	CRISPR spacer
gaattttacgttgccggtgtagaccagtgtca	Protospacer
*   . * **********.********.****

163. spacer 2.14|3124526|32|NZ_CP011428|CRISPRCasFinder,CRT matches to NC_010553 (Burkholderia ambifaria MC40-6 plasmid pBMC401, complete sequence) position: , mismatch: 8, identity: 0.75

gtcgcgttcgttgccggtatagaccagcgtca	CRISPR spacer
gatccggacgttgccggtattgaacagcgtcc	Protospacer
* . **  ************ ** *******

164. spacer 2.16|3124648|32|NZ_CP011428|CRISPRCasFinder,CRT matches to LQ277707 (Sequence 2 from Patent WO2016071503) position: , mismatch: 8, identity: 0.75

----gctcatgtcaaacgccatcagcgttccggcat	CRISPR spacer
aaaggct----gcaaacgccaatagcgttccggcaa	Protospacer
    ***     ********* .************

165. spacer 2.16|3124648|32|NZ_CP011428|CRISPRCasFinder,CRT matches to LZ998055 (JP 2017534684-A/2: Phage Therapy) position: , mismatch: 8, identity: 0.75

----gctcatgtcaaacgccatcagcgttccggcat	CRISPR spacer
aaaggct----gcaaacgccaatagcgttccggcaa	Protospacer
    ***     ********* .************

166. spacer 2.17|3124709|32|NZ_CP011428|CRISPRCasFinder,CRT matches to CP001770 (Spirosoma linguale DSM 74 plasmid pSLIN01, complete sequence) position: , mismatch: 8, identity: 0.75

aatcgccagcctcggaaatattccatcctccg	CRISPR spacer
ggttgccagccccggaagtattccatctccca	Protospacer
..*.*******.*****.*********..**.

167. spacer 2.36|3124464|33|NZ_CP011428|PILER-CR matches to NZ_CP030829 (Neorhizobium sp. NCHU2750 plasmid pNCHU2750b, complete sequence) position: , mismatch: 8, identity: 0.758

ctatttcgccttcggcactgacgtcaccgtcaa	CRISPR spacer
gtacgtcgccttcggcaatgtcgtcaccgaaga	Protospacer
 **. ************ ** ********  .*

168. spacer 2.37|3124525|33|NZ_CP011428|PILER-CR matches to NZ_CP014128 (Pantoea vagans strain FDAARGOS_160 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.758

cgtcgcgttcgttgccggtatagaccagcgtca	CRISPR spacer
cgaattttacgttgccggtgtagaccagtgtca	Protospacer
**   . * **********.********.****

169. spacer 2.37|3124525|33|NZ_CP011428|PILER-CR matches to NC_014561 (Pantoea vagans C9-1 plasmid pPag1, complete sequence) position: , mismatch: 8, identity: 0.758

cgtcgcgttcgttgccggtatagaccagcgtca	CRISPR spacer
cgaattttacgttgccggtgtagaccagtgtca	Protospacer
**   . * **********.********.****

170. spacer 2.45|3125013|33|NZ_CP011428|PILER-CR matches to NC_017958 (Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence) position: , mismatch: 8, identity: 0.758

cgggcactatgaacggatcggcgctgatgccgg	CRISPR spacer
tggcggcggtgaaaggatcggcggtgatgccgg	Protospacer
.**  .* .**** ********* *********

171. spacer 1.15|3106550|32|NZ_CP011428|PILER-CR matches to MK448228 (Klebsiella phage ST15-VIM1phi2.1, complete genome) position: , mismatch: 9, identity: 0.719

ccagaaagtgccggtagtgcctgatgaacgac	CRISPR spacer
gcatccagcgccggtagtgccggatgaactca	Protospacer
 **   **.************ *******

172. spacer 1.21|3106916|32|NZ_CP011428|PILER-CR matches to MT162468 (Synechococcus phage S-H25, complete genome) position: , mismatch: 9, identity: 0.719

tcccattcaccaacaacaatatcgccctgcaa----	CRISPR spacer
ccccaatcaccaacaataatatcgt----cagtgtt	Protospacer
.**** **********.*******.    **.

173. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to NZ_CP028537 (Enterobacter hormaechei strain SCEH020042 plasmid pQnrB4_020042, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

174. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to NZ_AP023191 (Escherichia coli strain TUM18530 plasmid pMTY18530-1_lncHI2, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

175. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to MN539017 (Salmonella sp. strain PJM1 plasmid pPJM1, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

176. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to MN539018 (Salmonella sp. strain OYZ4 plasmid pOYZ4, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

177. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to MT077888 (Escherichia coli plasmid p65, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

178. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to NC_009838 (Escherichia coli APEC O1 plasmid pAPEC-O1-R, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

179. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to NZ_CP044306 (Escherichia coli strain C27A plasmid pC27A-CTX-M-55, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

180. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to NZ_CP039170 (Salmonella enterica subsp. enterica serovar Goldcoast strain Sal-5364 plasmid pSal-5364, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

181. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to CP048299 (Salmonella enterica subsp. enterica serovar Schwarzengrund strain WAPHL_SAL-A00527 plasmid pN1566-2, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

182. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to CP048303 (Salmonella enterica subsp. enterica serovar Schwarzengrund strain WAPHL-SAL-A00375 plasmid p28945-2, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

183. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to NZ_CP037959 (Salmonella enterica subsp. enterica serovar Goldcoast strain R18.0877 plasmid pR18.0877_278k, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

184. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to NZ_CP039861 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014880 plasmid p16-6773.1, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

185. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to NZ_CP048776 (Salmonella enterica subsp. enterica serovar Agona strain SG17-135 plasmid pSG17-135-HI2, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

186. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to NC_019114 (Salmonella enterica subsp. enterica serovar Heidelberg plasmid pSH111_227, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

187. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to NZ_AP023198 (Escherichia coli strain TUM18780 plasmid pMTY18780-1_lncHI2, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

188. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to NZ_CP043223 (Salmonella enterica subsp. enterica serovar Bredeney strain SA20114778WT plasmid pET1.1-IncH, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

189. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to NZ_CP043223 (Salmonella enterica subsp. enterica serovar Bredeney strain SA20114778WT plasmid pET1.1-IncH, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

190. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to NZ_CP027411 (Salmonella enterica strain FDAARGOS_319 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

191. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to JQ807227 (Environmental Halophage eHP-6, partial genome) position: , mismatch: 9, identity: 0.719

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
catcggtctcggtctcggtcccggttccagtg	Protospacer
. ******************.****  ....*

192. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 9, identity: 0.719

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
cctcggcctcggtctcggcctcggcgtcggtg	Protospacer
.*****.***********.*****.. .*..*

193. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to NC_019201 (Streptomyces sp. x4(2010) plasmid pTSC1, complete sequence) position: , mismatch: 9, identity: 0.719

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
gctcggtctcagtctcggtctcagtctcgcgt	Protospacer
 *********.***********.**  .*

194. spacer 1.36|3106535|32|NZ_CP011428|CRT,CRISPRCasFinder matches to MK448228 (Klebsiella phage ST15-VIM1phi2.1, complete genome) position: , mismatch: 9, identity: 0.719

ccagaaagtgccggtagtgcctgatgaacgac	CRISPR spacer
gcatccagcgccggtagtgccggatgaactca	Protospacer
 **   **.************ *******

195. spacer 1.42|3106901|32|NZ_CP011428|CRT,CRISPRCasFinder matches to MT162468 (Synechococcus phage S-H25, complete genome) position: , mismatch: 9, identity: 0.719

tcccattcaccaacaacaatatcgccctgcaa----	CRISPR spacer
ccccaatcaccaacaataatatcgt----cagtgtt	Protospacer
.**** **********.*******.    **.

196. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to NZ_CP028537 (Enterobacter hormaechei strain SCEH020042 plasmid pQnrB4_020042, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

197. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to NZ_AP023191 (Escherichia coli strain TUM18530 plasmid pMTY18530-1_lncHI2, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

198. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to MN539017 (Salmonella sp. strain PJM1 plasmid pPJM1, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

199. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to MN539018 (Salmonella sp. strain OYZ4 plasmid pOYZ4, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

200. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to MT077888 (Escherichia coli plasmid p65, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

201. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to NC_009838 (Escherichia coli APEC O1 plasmid pAPEC-O1-R, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

202. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to NZ_CP044306 (Escherichia coli strain C27A plasmid pC27A-CTX-M-55, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

203. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to NZ_CP039170 (Salmonella enterica subsp. enterica serovar Goldcoast strain Sal-5364 plasmid pSal-5364, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

204. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to CP048299 (Salmonella enterica subsp. enterica serovar Schwarzengrund strain WAPHL_SAL-A00527 plasmid pN1566-2, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

205. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to CP048303 (Salmonella enterica subsp. enterica serovar Schwarzengrund strain WAPHL-SAL-A00375 plasmid p28945-2, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

206. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to NZ_CP037959 (Salmonella enterica subsp. enterica serovar Goldcoast strain R18.0877 plasmid pR18.0877_278k, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

207. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to NZ_CP039861 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014880 plasmid p16-6773.1, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

208. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to NZ_CP048776 (Salmonella enterica subsp. enterica serovar Agona strain SG17-135 plasmid pSG17-135-HI2, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

209. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to NC_019114 (Salmonella enterica subsp. enterica serovar Heidelberg plasmid pSH111_227, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

210. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to NZ_AP023198 (Escherichia coli strain TUM18780 plasmid pMTY18780-1_lncHI2, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

211. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to NZ_CP043223 (Salmonella enterica subsp. enterica serovar Bredeney strain SA20114778WT plasmid pET1.1-IncH, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

212. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to NZ_CP043223 (Salmonella enterica subsp. enterica serovar Bredeney strain SA20114778WT plasmid pET1.1-IncH, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

213. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to NZ_CP027411 (Salmonella enterica strain FDAARGOS_319 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

214. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to JQ807227 (Environmental Halophage eHP-6, partial genome) position: , mismatch: 9, identity: 0.719

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
catcggtctcggtctcggtcccggttccagtg	Protospacer
. ******************.****  ....*

215. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 9, identity: 0.719

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
cctcggcctcggtctcggcctcggcgtcggtg	Protospacer
.*****.***********.*****.. .*..*

216. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to NC_019201 (Streptomyces sp. x4(2010) plasmid pTSC1, complete sequence) position: , mismatch: 9, identity: 0.719

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
gctcggtctcagtctcggtctcagtctcgcgt	Protospacer
 *********.***********.**  .*

217. spacer 2.10|3124282|32|NZ_CP011428|CRISPRCasFinder,CRT matches to NZ_CP051686 (Duganella sp. GN2-R2 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

tgccagtgactacagaagcgtcgctatcgggg	CRISPR spacer
cacgcctgactaccgaagtgtcgctatcggac	Protospacer
..*   ******* ****.***********.

218. spacer 2.14|3124526|32|NZ_CP011428|CRISPRCasFinder,CRT matches to NZ_CP045722 (Pantoea eucalypti strain LMG 24197 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

gtcgcgttcgttgccggtatagaccagcgtca	CRISPR spacer
aaacttgacgttgccggtatagatcagcgtca	Protospacer
.   .   ***************.********

219. spacer 2.14|3124526|32|NZ_CP011428|CRISPRCasFinder,CRT matches to NZ_CP022519 (Pantoea vagans strain FBS135 plasmid pPant3, complete sequence) position: , mismatch: 9, identity: 0.719

gtcgcgttcgttgccggtatagaccagcgtca	CRISPR spacer
aaacttgacgttgccggtatagatcagcgtca	Protospacer
.   .   ***************.********

220. spacer 2.14|3124526|32|NZ_CP011428|CRISPRCasFinder,CRT matches to NZ_CP028351 (Pantoea vagans strain PV989 plasmid pPV989-167, complete sequence) position: , mismatch: 9, identity: 0.719

gtcgcgttcgttgccggtatagaccagcgtca	CRISPR spacer
aaattttacgttgccggtgtagaccagtgtca	Protospacer
.   . * **********.********.****

221. spacer 2.18|3124770|32|NZ_CP011428|CRISPRCasFinder,CRT matches to MN062720 (Microbacterium phage FuzzBuster, complete genome) position: , mismatch: 9, identity: 0.719

aggaactaaacagcctgaccgttgaggatctg	CRISPR spacer
tcctcctggacaggctgaccgttgacgatctg	Protospacer
     **..**** *********** ******

222. spacer 2.19|3124831|32|NZ_CP011428|CRISPRCasFinder,CRT matches to MN694645 (Marine virus AFVG_250M761, complete genome) position: , mismatch: 9, identity: 0.719

accggacaaatcttttttttcctgttcctgtt	CRISPR spacer
gcatcattaatcctttttttcctgttactgta	Protospacer
.*   *. ****.************* ****

223. spacer 2.22|3125014|32|NZ_CP011428|CRISPRCasFinder,CRT matches to DQ674738 (Aeromonas phage phiO18P, complete genome) position: , mismatch: 9, identity: 0.719

gggcactatgaacggatcggcgctgatgccgg	CRISPR spacer
cagtttgctgaactgctcggcgctgatgccgg	Protospacer
 .*. .  ***** * ****************

224. spacer 2.22|3125014|32|NZ_CP011428|CRISPRCasFinder,CRT matches to NZ_CP031166 (Euzebya sp. DY32-46 plasmid pEDY32-46I, complete sequence) position: , mismatch: 9, identity: 0.719

gggcactatgaacggatcggcgctgatgccgg	CRISPR spacer
cctgacggtgaaccggtcggcgctgatgccgc	Protospacer
    ** .***** *.***************

225. spacer 2.22|3125014|32|NZ_CP011428|CRISPRCasFinder,CRT matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 9, identity: 0.719

gggcactatgaacggatcggcgctgatgccgg	CRISPR spacer
cagggcgtcgaactgatcggcgctcatgccgg	Protospacer
 .* .*  .**** ********** *******

226. spacer 2.23|3125075|32|NZ_CP011428|CRISPRCasFinder,CRT matches to MN693046 (Marine virus AFVG_25M413, complete genome) position: , mismatch: 9, identity: 0.719

ggtaaagccacaccattttttattgacctcgc	CRISPR spacer
tctgaaaccacaccattttttgttgaccctaa	Protospacer
  *.**.**************.******...

227. spacer 2.23|3125075|32|NZ_CP011428|CRISPRCasFinder,CRT matches to MN693008 (Marine virus AFVG_117M9, complete genome) position: , mismatch: 9, identity: 0.719

ggtaaagccacaccattttttattgacctcgc	CRISPR spacer
tctgaaaccacaccattttttgttgaccctaa	Protospacer
  *.**.**************.******...

228. spacer 2.31|3124158|33|NZ_CP011428|PILER-CR matches to CP024685 (Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-1-490K, complete sequence) position: , mismatch: 9, identity: 0.727

ctaacgaactgaataaaatgtcagaaagtgacg	CRISPR spacer
tggcagaactgaataaaatgtctgatagtgaat	Protospacer
. .  ***************** ** *****

229. spacer 2.37|3124525|33|NZ_CP011428|PILER-CR matches to NZ_CP045722 (Pantoea eucalypti strain LMG 24197 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.727

cgtcgcgttcgttgccggtatagaccagcgtca	CRISPR spacer
caaacttgacgttgccggtatagatcagcgtca	Protospacer
*.   .   ***************.********

230. spacer 2.37|3124525|33|NZ_CP011428|PILER-CR matches to NZ_CP022519 (Pantoea vagans strain FBS135 plasmid pPant3, complete sequence) position: , mismatch: 9, identity: 0.727

cgtcgcgttcgttgccggtatagaccagcgtca	CRISPR spacer
caaacttgacgttgccggtatagatcagcgtca	Protospacer
*.   .   ***************.********

231. spacer 2.37|3124525|33|NZ_CP011428|PILER-CR matches to NZ_CP028351 (Pantoea vagans strain PV989 plasmid pPV989-167, complete sequence) position: , mismatch: 9, identity: 0.727

cgtcgcgttcgttgccggtatagaccagcgtca	CRISPR spacer
caaattttacgttgccggtgtagaccagtgtca	Protospacer
*.   . * **********.********.****

232. spacer 2.45|3125013|33|NZ_CP011428|PILER-CR matches to DQ674738 (Aeromonas phage phiO18P, complete genome) position: , mismatch: 9, identity: 0.727

cgggcactatgaacggatcggcgctgatgccgg	CRISPR spacer
ccagtttgctgaactgctcggcgctgatgccgg	Protospacer
* .*. .  ***** * ****************

233. spacer 1.1|3105699|32|NZ_CP011428|CRISPRCasFinder,CRT matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 10, identity: 0.688

ttttcagcccttgtcgactgcggaacgcccct	CRISPR spacer
tccctcaccctcgtcgactgcggaccgcccgg	Protospacer
*.... .****.************ *****

234. spacer 1.1|3105699|32|NZ_CP011428|CRISPRCasFinder,CRT matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 10, identity: 0.688

ttttcagcccttgtcgactgcggaacgcccct	CRISPR spacer
tccctcaccctcgtcgactgcggaccgcccgg	Protospacer
*.... .****.************ *****

235. spacer 1.13|3106428|32|NZ_CP011428|PILER-CR matches to NZ_AP022571 (Mycolicibacterium poriferae strain JCM 12603 plasmid pJCM12603, complete sequence) position: , mismatch: 10, identity: 0.688

tggaccgatggggccaacatcgccgaacgtgg	CRISPR spacer
cacctggatgggggccacatcgccgaacgagt	Protospacer
..  . ******* * ************* *

236. spacer 1.21|3106916|32|NZ_CP011428|PILER-CR matches to LN681539 (Clostridium phage phiCD505, complete genome) position: , mismatch: 10, identity: 0.688

tcccattcaccaacaacaatatcgccctgcaa	CRISPR spacer
tcccattcctcaacaacaatatcattttcact	Protospacer
******** .*************....*

237. spacer 1.21|3106916|32|NZ_CP011428|PILER-CR matches to JX145341 (Clostridium phage phiMMP02, complete genome) position: , mismatch: 10, identity: 0.688

tcccattcaccaacaacaatatcgccctgcaa	CRISPR spacer
tcccattcctcaacaacaatatcattttcact	Protospacer
******** .*************....*

238. spacer 1.21|3106916|32|NZ_CP011428|PILER-CR matches to NC_011398 (Clostridium phage phiCD27, complete genome) position: , mismatch: 10, identity: 0.688

tcccattcaccaacaacaatatcgccctgcaa	CRISPR spacer
tcccattcctcaacaacaatatcattttcact	Protospacer
******** .*************....*

239. spacer 1.21|3106916|32|NZ_CP011428|PILER-CR matches to NC_048642 (Clostridium phage CDKM9, complete genome) position: , mismatch: 10, identity: 0.688

tcccattcaccaacaacaatatcgccctgcaa	CRISPR spacer
tcccattcctcaacaacaatatcattttcact	Protospacer
******** .*************....*

240. spacer 1.21|3106916|32|NZ_CP011428|PILER-CR matches to KX228400 (Clostridium phage CDKM15, complete genome) position: , mismatch: 10, identity: 0.688

tcccattcaccaacaacaatatcgccctgcaa	CRISPR spacer
tcccattcctcaacaacaatatcattttcact	Protospacer
******** .*************....*

241. spacer 1.22|3106977|32|NZ_CP011428|PILER-CR matches to NZ_CP020539 (Sphingobium herbicidovorans strain MH plasmid pMSHV, complete sequence) position: , mismatch: 10, identity: 0.688

cgttgcgtcaggttgatccagtgcgtcagcgg	CRISPR spacer
tcaaacgccaggttgatcaagtgcgtcagatt	Protospacer
.   .**.********** **********

242. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to NZ_KY689633 (Escherichia coli strain 100R plasmid p100R, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

243. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to NZ_KY689632 (Escherichia coli strain 19-M12 plasmid p19M12, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

244. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to NZ_CP045446 (Salmonella enterica subsp. enterica serovar Schwarzengrund strain 9355 plasmid p280_9355, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

245. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to NZ_KU743384 (Escherichia coli strain SA26 plasmid pSA26-MCR-1, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

246. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to NZ_KU254578 (Escherichia coli strain YD786 plasmid pYD786-1, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

247. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to NZ_KX129782 (Escherichia coli strain S38 plasmid pS38, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

248. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to NZ_CP015833 (Escherichia coli O157 strain 180-PT54 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

249. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to LT221036 (Yersinia pseudotuberculosis strain Yps.F1, plasmid pYps.F1 complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

250. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to CP019195 (Salmonella enterica subsp. enterica serovar Senftenberg str. ATCC 43845 plasmid pATCC43845, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

251. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to NZ_CP045449 (Salmonella enterica subsp. enterica serovar Schwarzengrund strain 12888 plasmid p280_12888, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

252. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to NZ_CP015096 (Pelagibaca abyssi strain JLT2014 plasmid pPABY8, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
cctcggtctcgtcctcggtctcggcctcggtc------	Protospacer
      ***** .***********.******

253. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to MN732922 (Escherichia coli strain 49K plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

254. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to NZ_CP020493 (Salmonella enterica subsp. enterica strain 08-00436 plasmid pSE08-00436-1, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

255. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to CP031284 (Escherichia fergusonii strain 40A plasmid p280_40A, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

256. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to CP042895 (Escherichia coli strain CFSAN061772 plasmid pCFSAN061772_02, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

257. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to NZ_CP022735 (Escherichia coli strain SA186 plasmid pSA186_MCR1, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

258. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to CP042898 (Escherichia coli strain CFSAN061771 plasmid pCFSAN061771_02, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

259. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to NZ_CP022165 (Escherichia coli strain M160133 plasmid pM160133_p1, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

260. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to NZ_CP012931 (Salmonella enterica subsp. enterica serovar Heidelberg strain N13-01290 plasmid pN13-01290_23, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

261. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to NZ_CP023143 (Escherichia coli strain CFSAN061770 plasmid pEGY1-MCR-1, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

262. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to NZ_CP026936 (Escherichia coli strain CFS3292 plasmid pCFS3292-1, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

263. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to NZ_CP025402 (Escherichia coli strain MS8345 plasmid pMS8345A, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

264. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to NZ_CP026933 (Escherichia coli strain CFS3273 plasmid pCFS3273-1, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

265. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to NZ_MH924589 (Escherichia coli strain RDB9 plasmid pRDB9, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

266. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to NZ_MH208235 (Escherichia coli strain APECA2 plasmid pJMA2, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

267. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to NZ_MK169211 (Escherichia coli strain DUK14-2 plasmid pMOO-32, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

268. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to NZ_CP016838 (Salmonella enterica subsp. enterica serovar Senftenberg strain 775W (ATCC 43845) plasmid pSSE-ATCC-43845, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

269. spacer 1.23|3107038|32|NZ_CP011428|PILER-CR matches to NZ_CP045074 (Paracoccus kondratievae strain BJQ0001 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
cgcgcagcccggtctcggtctcggttgtggcg	Protospacer
. .  . *.**************** ***.**

270. spacer 1.34|3106413|32|NZ_CP011428|CRT,CRISPRCasFinder matches to NZ_AP022571 (Mycolicibacterium poriferae strain JCM 12603 plasmid pJCM12603, complete sequence) position: , mismatch: 10, identity: 0.688

tggaccgatggggccaacatcgccgaacgtgg	CRISPR spacer
cacctggatgggggccacatcgccgaacgagt	Protospacer
..  . ******* * ************* *

271. spacer 1.42|3106901|32|NZ_CP011428|CRT,CRISPRCasFinder matches to LN681539 (Clostridium phage phiCD505, complete genome) position: , mismatch: 10, identity: 0.688

tcccattcaccaacaacaatatcgccctgcaa	CRISPR spacer
tcccattcctcaacaacaatatcattttcact	Protospacer
******** .*************....*

272. spacer 1.42|3106901|32|NZ_CP011428|CRT,CRISPRCasFinder matches to JX145341 (Clostridium phage phiMMP02, complete genome) position: , mismatch: 10, identity: 0.688

tcccattcaccaacaacaatatcgccctgcaa	CRISPR spacer
tcccattcctcaacaacaatatcattttcact	Protospacer
******** .*************....*

273. spacer 1.42|3106901|32|NZ_CP011428|CRT,CRISPRCasFinder matches to NC_011398 (Clostridium phage phiCD27, complete genome) position: , mismatch: 10, identity: 0.688

tcccattcaccaacaacaatatcgccctgcaa	CRISPR spacer
tcccattcctcaacaacaatatcattttcact	Protospacer
******** .*************....*

274. spacer 1.42|3106901|32|NZ_CP011428|CRT,CRISPRCasFinder matches to NC_048642 (Clostridium phage CDKM9, complete genome) position: , mismatch: 10, identity: 0.688

tcccattcaccaacaacaatatcgccctgcaa	CRISPR spacer
tcccattcctcaacaacaatatcattttcact	Protospacer
******** .*************....*

275. spacer 1.42|3106901|32|NZ_CP011428|CRT,CRISPRCasFinder matches to KX228400 (Clostridium phage CDKM15, complete genome) position: , mismatch: 10, identity: 0.688

tcccattcaccaacaacaatatcgccctgcaa	CRISPR spacer
tcccattcctcaacaacaatatcattttcact	Protospacer
******** .*************....*

276. spacer 1.43|3106962|32|NZ_CP011428|CRT,CRISPRCasFinder matches to NZ_CP020539 (Sphingobium herbicidovorans strain MH plasmid pMSHV, complete sequence) position: , mismatch: 10, identity: 0.688

cgttgcgtcaggttgatccagtgcgtcagcgg	CRISPR spacer
tcaaacgccaggttgatcaagtgcgtcagatt	Protospacer
.   .**.********** **********

277. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to NZ_KY689633 (Escherichia coli strain 100R plasmid p100R, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

278. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to NZ_KY689632 (Escherichia coli strain 19-M12 plasmid p19M12, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

279. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to NZ_CP045446 (Salmonella enterica subsp. enterica serovar Schwarzengrund strain 9355 plasmid p280_9355, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

280. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to NZ_KU743384 (Escherichia coli strain SA26 plasmid pSA26-MCR-1, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

281. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to NZ_KU254578 (Escherichia coli strain YD786 plasmid pYD786-1, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

282. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to NZ_KX129782 (Escherichia coli strain S38 plasmid pS38, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

283. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to NZ_CP015833 (Escherichia coli O157 strain 180-PT54 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

284. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to LT221036 (Yersinia pseudotuberculosis strain Yps.F1, plasmid pYps.F1 complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

285. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to CP019195 (Salmonella enterica subsp. enterica serovar Senftenberg str. ATCC 43845 plasmid pATCC43845, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

286. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to NZ_CP045449 (Salmonella enterica subsp. enterica serovar Schwarzengrund strain 12888 plasmid p280_12888, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

287. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to NZ_CP015096 (Pelagibaca abyssi strain JLT2014 plasmid pPABY8, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
cctcggtctcgtcctcggtctcggcctcggtc------	Protospacer
      ***** .***********.******

288. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to MN732922 (Escherichia coli strain 49K plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

289. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to NZ_CP020493 (Salmonella enterica subsp. enterica strain 08-00436 plasmid pSE08-00436-1, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

290. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to CP031284 (Escherichia fergusonii strain 40A plasmid p280_40A, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

291. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to CP042895 (Escherichia coli strain CFSAN061772 plasmid pCFSAN061772_02, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

292. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to NZ_CP022735 (Escherichia coli strain SA186 plasmid pSA186_MCR1, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

293. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to CP042898 (Escherichia coli strain CFSAN061771 plasmid pCFSAN061771_02, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

294. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to NZ_CP022165 (Escherichia coli strain M160133 plasmid pM160133_p1, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

295. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to NZ_CP012931 (Salmonella enterica subsp. enterica serovar Heidelberg strain N13-01290 plasmid pN13-01290_23, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

296. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to NZ_CP023143 (Escherichia coli strain CFSAN061770 plasmid pEGY1-MCR-1, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

297. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to NZ_CP026936 (Escherichia coli strain CFS3292 plasmid pCFS3292-1, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

298. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to NZ_CP025402 (Escherichia coli strain MS8345 plasmid pMS8345A, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

299. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to NZ_CP026933 (Escherichia coli strain CFS3273 plasmid pCFS3273-1, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

300. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to NZ_MH924589 (Escherichia coli strain RDB9 plasmid pRDB9, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

301. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to NZ_MH208235 (Escherichia coli strain APECA2 plasmid pJMA2, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

302. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to NZ_MK169211 (Escherichia coli strain DUK14-2 plasmid pMOO-32, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

303. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to NZ_CP016838 (Salmonella enterica subsp. enterica serovar Senftenberg strain 775W (ATCC 43845) plasmid pSSE-ATCC-43845, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

304. spacer 1.44|3107023|32|NZ_CP011428|CRT,CRISPRCasFinder matches to NZ_CP045074 (Paracoccus kondratievae strain BJQ0001 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
cgcgcagcccggtctcggtctcggttgtggcg	Protospacer
. .  . *.**************** ***.**

305. spacer 2.1|3123732|32|NZ_CP011428|CRISPRCasFinder,CRT matches to NZ_CP054615 (Azospirillum oryzae strain KACC 14407 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

atcttcatattgcgtgacgctgccgatgaacg	CRISPR spacer
tgccggatatggcgtgacgatgccgatgatgt	Protospacer
  *.  **** ******** *********

306. spacer 2.4|3123915|32|NZ_CP011428|CRISPRCasFinder,CRT matches to NZ_CP044072 (Pseudomonas oryzihabitans strain FDAARGOS_657 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

tgcccgttctgcctcttcgcactctcgatcaa	CRISPR spacer
tgcccgttctgtctcttggcactgccaccttc	Protospacer
***********.***** ***** .*. ..

307. spacer 2.18|3124770|32|NZ_CP011428|CRISPRCasFinder,CRT matches to NZ_CP019257 (Escherichia coli strain 13TMH22 plasmid p13TMH22-1, complete sequence) position: , mismatch: 10, identity: 0.688

aggaactaaacagcctgaccgttgaggatctg	CRISPR spacer
ggtttaccgacagcctgacggttgacgatctg	Protospacer
.*    . .********** ***** ******

308. spacer 2.18|3124770|32|NZ_CP011428|CRISPRCasFinder,CRT matches to NZ_CP019274 (Escherichia coli strain 13P477T plasmid p13P477T-1, complete sequence) position: , mismatch: 10, identity: 0.688

aggaactaaacagcctgaccgttgaggatctg	CRISPR spacer
ggtttaccgacagcctgacggttgacgatctg	Protospacer
.*    . .********** ***** ******

309. spacer 2.18|3124770|32|NZ_CP011428|CRISPRCasFinder,CRT matches to NZ_CP019275 (Escherichia coli strain 13P477T plasmid p13P477T-2, complete sequence) position: , mismatch: 10, identity: 0.688

aggaactaaacagcctgaccgttgaggatctg	CRISPR spacer
ggtttaccgacagcctgacggttgacgatctg	Protospacer
.*    . .********** ***** ******

310. spacer 2.18|3124770|32|NZ_CP011428|CRISPRCasFinder,CRT matches to NZ_CP019279 (Escherichia coli strain 13P477T plasmid p13P477T-6, complete sequence) position: , mismatch: 10, identity: 0.688

aggaactaaacagcctgaccgttgaggatctg	CRISPR spacer
ggtttaccgacagcctgacggttgacgatctg	Protospacer
.*    . .********** ***** ******

311. spacer 2.18|3124770|32|NZ_CP011428|CRISPRCasFinder,CRT matches to NZ_CP019246 (Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence) position: , mismatch: 10, identity: 0.688

aggaactaaacagcctgaccgttgaggatctg	CRISPR spacer
ggtttaccgacagcctgacggttgacgatctg	Protospacer
.*    . .********** ***** ******

312. spacer 2.18|3124770|32|NZ_CP011428|CRISPRCasFinder,CRT matches to NC_049342 (Escherichia phage 500465-1, complete genome) position: , mismatch: 10, identity: 0.688

aggaactaaacagcctgaccgttgaggatctg	CRISPR spacer
ggtttaccgacagcctgacggttgacgatctg	Protospacer
.*    . .********** ***** ******

313. spacer 2.18|3124770|32|NZ_CP011428|CRISPRCasFinder,CRT matches to KY271398 (Klebsiella phage 4 LV-2017, complete genome) position: , mismatch: 10, identity: 0.688

aggaactaaacagcctgaccgttgaggatctg	CRISPR spacer
ggtttaccgacagcctgacggttgacgatctg	Protospacer
.*    . .********** ***** ******

314. spacer 2.18|3124770|32|NZ_CP011428|CRISPRCasFinder,CRT matches to CP025900 (Escherichia phage sp., complete genome) position: , mismatch: 10, identity: 0.688

aggaactaaacagcctgaccgttgaggatctg	CRISPR spacer
ggtttaccgacagcctgacggttgacgatctg	Protospacer
.*    . .********** ***** ******

315. spacer 2.33|3124281|33|NZ_CP011428|PILER-CR matches to NZ_CP051686 (Duganella sp. GN2-R2 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.697

ctgccagtgactacagaagcgtcgctatcgggg	CRISPR spacer
acacgcctgactaccgaagtgtcgctatcggac	Protospacer
 ..*   ******* ****.***********.

316. spacer 2.46|3125074|33|NZ_CP011428|PILER-CR matches to MN693046 (Marine virus AFVG_25M413, complete genome) position: , mismatch: 10, identity: 0.697

cggtaaagccacaccattttttattgacctcgc	CRISPR spacer
ttctgaaaccacaccattttttgttgaccctaa	Protospacer
.  *.**.**************.******...

317. spacer 2.46|3125074|33|NZ_CP011428|PILER-CR matches to MN693008 (Marine virus AFVG_117M9, complete genome) position: , mismatch: 10, identity: 0.697

cggtaaagccacaccattttttattgacctcgc	CRISPR spacer
ttctgaaaccacaccattttttgttgaccctaa	Protospacer
.  *.**.**************.******...

318. spacer 2.22|3125014|32|NZ_CP011428|CRISPRCasFinder,CRT matches to NZ_CP054036 (Rhizobium sp. JKLM13E plasmid pPR13E05, complete sequence) position: , mismatch: 11, identity: 0.656

gggcactatgaacggatcggcgctgatgccgg	CRISPR spacer
atagactaggagcggatcggcgctgatcggaa	Protospacer
. . **** **.***************   ..

319. spacer 2.22|3125014|32|NZ_CP011428|CRISPRCasFinder,CRT matches to NZ_CP022568 (Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK04, complete sequence) position: , mismatch: 11, identity: 0.656

gggcactatgaacggatcggcgctgatgccgg	CRISPR spacer
atagactaggagcggatcggcgctgatcggaa	Protospacer
. . **** **.***************   ..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

363737 : 408972

Salmonella_phage(44.78%)

protease,coat,portal,lysis,integrase,holin

attL 354507:354523|attR 417551:417567

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
354507:354523	attL	NA	NA	NA	NA
WP_001043675.1\|363737_364790_-	phosphoporin PhoE	Q1MVN1	Enterobacteria_phage	1.7e-112	58.5
WP_001285275.1\|365072_366176_+	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	6.9e-61	39.8
WP_000893231.1\|366187_367438_+	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	1.6e-98	47.5
WP_000051898.1\|367643_368807_-\|integrase	site-specific integrase	A0A2H5BFK7	Salmonella_phage	6.3e-230	100.0
WP_153246670.1\|369036_369177_-	hypothetical protein	A0A0M4QWX3	Salmonella_phage	5.2e-14	91.3
WP_001084858.1\|369245_369773_-	DUF551 domain-containing protein	E7C9P2	Salmonella_phage	1.8e-99	100.0
WP_000348980.1\|369774_369966_-	hypothetical protein	A0A2I6TD51	Escherichia_phage	2.1e-26	100.0
WP_000034216.1\|369967_370807_-	hypothetical protein	A0A088CC42	Shigella_phage	7.8e-65	64.8
WP_000812204.1\|370803_371445_-	hypothetical protein	E7C9P6	Salmonella_phage	1.7e-112	100.0
WP_001214777.1\|371441_371612_-	DUF2737 family protein	Q76H43	Enterobacteria_phage	1.6e-25	100.0
WP_001111291.1\|371622_371916_-	DUF2856 family protein	Q76H42	Enterobacteria_phage	1.4e-48	100.0
WP_001253476.1\|371962_372247_-	sigma-70 family RNA polymerase sigma factor	Q76H41	Enterobacteria_phage	1.4e-45	100.0
WP_022630923.1\|372246_372954_-	recombinase	A0A1R3Y600	Salmonella_virus	2.6e-138	99.6
WP_000902087.1\|372950_373094_-	hypothetical protein	A0A1R3Y5R4	Salmonella_virus	2.4e-19	100.0
WP_001749553.1\|373083_373272_-	DUF5444 family protein	B8K1E1	Salmonella_phage	1.6e-31	100.0
WP_015995137.1\|373252_373405_-\|protease	protease FtsH-inhibitory lysogeny factor CIII	B8K1E2	Salmonella_phage	3.2e-25	100.0
WP_024144163.1\|373728_374019_-	hypothetical protein	A0A1R3Y5U4	Salmonella_virus	1.1e-31	73.3
WP_022630926.1\|374050_374293_-	hypothetical protein	U5PUY0	Salmonella_phage	7.8e-18	58.4
WP_022630927.1\|374320_374521_-	Restriction inhibitor protein ral	A0A1R3Y5S4	Salmonella_virus	1.1e-30	97.0
WP_001682202.1\|374735_375314_+	superinfection exclusion protein B	A0A075B8E6	Enterobacteria_phage	8.8e-92	100.0
WP_015975212.1\|375334_375637_-	hypothetical protein	A0A075B8K6	Enterobacteria_phage	3.7e-49	100.0
WP_001095984.1\|375990_376641_-	LexA family transcriptional regulator	B1B6L9	Salmonella_phage	5.4e-122	100.0
WP_000276884.1\|376721_376907_+	hypothetical protein	Q5G8T3	Enterobacteria_phage	5.4e-27	100.0
WP_000424167.1\|377013_377292_+	transcriptional regulator	Q5G8T2	Enterobacteria_phage	2.5e-44	100.0
WP_001125981.1\|377326_377473_+	DUF2740 family protein	A0A075B8K7	Enterobacteria_phage	1.5e-19	100.0
WP_000067075.1\|377465_378281_+	replication protein	A0A075B8J2	Enterobacteria_phage	9.4e-148	100.0
WP_001248406.1\|378277_379654_+	DNA helicase	A0A075B8G2	Enterobacteria_phage	3.3e-254	100.0
WP_000736921.1\|379727_380165_+	recombination protein NinB	A8CGE3	Salmonella_phage	1.3e-79	100.0
WP_000679702.1\|380161_380335_+	hypothetical protein	C6ZR56	Salmonella_phage	5.2e-32	100.0
WP_000113772.1\|380301_380478_+	NinE family protein	I6RSQ2	Salmonella_phage	4.6e-28	100.0
WP_001531428.1\|380480_380813_+	DUF2591 domain-containing protein	A0A075B8G3	Enterobacteria_phage	3.5e-61	100.0
WP_000950959.1\|380805_380982_+	protein ninF	I6S668	Salmonella_phage	2.5e-26	100.0
WP_001129733.1\|380974_381586_+	recombination protein NinG	A0A075B8E9	Enterobacteria_phage	1.3e-98	100.0
WP_000036317.1\|381582_381807_+	hypothetical protein	Q5G8R9	Enterobacteria_phage	2.2e-38	100.0
WP_000149926.1\|381803_382007_+	protein ninH	Q5G8R8	Enterobacteria_phage	7.2e-33	100.0
WP_000219138.1\|381987_382167_+	hypothetical protein	A0A1V0E5I7	Salmonella_phage	7.1e-24	100.0
WP_001235452.1\|382163_382787_+	antitermination protein	K7PM87	Enterobacteria_phage	8.3e-96	87.0
WP_022630928.1\|383112_383631_+	endodeoxyribonuclease	A0A1V0E5R7	Salmonella_phage	6.3e-57	66.9
WP_000738703.1\|383855_384182_+\|holin	phage holin, lambda family	Q5G8R5	Enterobacteria_phage	1.7e-52	100.0
WP_001167374.1\|384165_384603_+	lysozyme	Q5G8R3	Enterobacteria_phage	6.3e-74	97.9
WP_011233123.1\|384620_385070_+\|lysis	lysis protein	A0A2D1GLQ7	Escherichia_phage	3.0e-63	87.8
WP_001028469.1\|385282_385804_+	DNA-binding protein	H6WRZ8	Salmonella_phage	1.9e-101	100.0
WP_000808099.1\|386127_386370_+	DUF2560 family protein	Q76H60	Enterobacteria_phage	1.7e-33	100.0
WP_001140562.1\|386373_386763_+	hypothetical protein	Q76H27	Enterobacteria_phage	3.9e-75	100.0
WP_001687044.1\|386762_387167_+	hypothetical protein	Q76H26	Enterobacteria_phage	1.1e-67	100.0
WP_000729923.1\|387170_387659_+	hypothetical protein	Q76H25	Enterobacteria_phage	1.0e-88	100.0
WP_022630929.1\|387636_389136_+	DNA packaging protein	Q76H24	Enterobacteria_phage	8.2e-307	99.8
WP_000774649.1\|389135_391313_+\|portal	portal protein	A0A075B8I1	Enterobacteria_phage	0.0e+00	100.0
WP_000433852.1\|391326_392238_+	scaffold protein	A0A192Y6T4	Salmonella_phage	4.9e-161	100.0
WP_001196937.1\|392237_393530_+\|coat	coat protein	Q76H21	Enterobacteria_phage	1.1e-243	100.0
WP_000538670.1\|393570_394131_+	hypothetical protein	C6ZR11	Salmonella_phage	9.8e-104	100.0
WP_022631114.1\|394114_394615_+	Packaged DNA stabilization protein gp4	I1TEJ0	Salmonella_phage	2.7e-89	98.2
WP_022631115.1\|394574_395993_+	Packaged DNA stabilization protein gp10	E7C9U1	Salmonella_phage	1.6e-275	99.8
WP_022631116.1\|395996_396698_+	hypothetical protein	B8K1I3	Salmonella_phage	1.8e-70	98.7
WP_000627695.1\|396697_397153_+	DUF2824 family protein	B8K1I4	Salmonella_phage	1.4e-87	100.0
WP_000964900.1\|397155_397845_+	hypothetical protein	E7C9U4	Salmonella_phage	4.3e-109	100.0
WP_046891324.1\|397855_399205_+	phage DNA ejection protein	A5VW65	Enterobacteria_phage	5.4e-241	96.4
WP_046891325.1\|399204_401373_+	DNA transfer protein	Q9AYY9	Salmonella_phage	0.0e+00	94.7
WP_000821346.1\|401468_401888_+	hypothetical protein	B9UDL3	Salmonella_phage	1.3e-73	100.0
WP_046891326.1\|401932_402118_+	hypothetical protein	I6RSG3	Salmonella_phage	2.8e-07	96.7
WP_046891327.1\|402127_402445_-	hypothetical protein	NA	NA	NA	NA
WP_001283828.1\|402441_402693_-	Arc family DNA-binding protein	A5VW59	Enterobacteria_phage	3.9e-36	95.1
WP_000865491.1\|402798_402939_+	Arc family DNA-binding protein	A0A0M4S6R9	Salmonella_phage	5.7e-05	59.1
WP_046891328.1\|403037_403961_+	antirepressor	A5VW58	Enterobacteria_phage	6.2e-164	90.6
WP_046891329.1\|404171_406175_+	endorhamnosidase	E7C9U9	Salmonella_phage	0.0e+00	99.9
WP_000671497.1\|406233_407691_-	hypothetical protein	E7C9N7	Salmonella_phage	1.3e-240	100.0
WP_000703639.1\|407680_408613_-	glycosyltransferase family 2 protein	A8CG95	Salmonella_phage	5.5e-176	100.0
WP_000915528.1\|408609_408972_-	GtrA family protein	A0A192Y6N5	Salmonella_phage	5.0e-61	100.0
417551:417567	attR	NA	NA	NA	NA

DBSCAN-SWA_2

1016869 : 1025601

Dickeya_phage(14.29%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001201751.1\|1016869_1017988_+	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.4e-08	38.9
WP_000125877.1\|1017984_1019931_+	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	2.0e-39	43.1
WP_000447499.1\|1020060_1020282_-	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	9.3e-18	64.2
WP_000520789.1\|1020605_1020926_+\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	4.5e-13	45.7
WP_000934063.1\|1020956_1023233_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	6.2e-165	42.3
WP_000502119.1\|1023424_1023883_+\|transposase	IS200/IS605-like element IS200F family transposase	I4AZI8	Saccharomonospora_phage	1.0e-13	31.5
WP_085983316.1\|1024345_1025601_-\|transposase	IS3-like element ISSen1 family transposase	Q6H9S3	Enterobacteria_phage	5.4e-17	33.9

DBSCAN-SWA_3

1075664 : 1166581

Salmonella_phage(58.7%)

protease,terminase,tRNA,lysis,integrase,tail,holin

attL 1078573:1078592|attR 1142469:1142488

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001154025.1\|1075664_1076468_+\|tRNA	tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM	NA	NA	NA	NA
WP_001288828.1\|1076460_1077783_+	chromosome partition protein MukF	NA	NA	NA	NA
WP_000060025.1\|1077763_1078468_+	chromosome partition protein MukE	NA	NA	NA	NA
WP_022630856.1\|1078467_1082934_+	chromosome partition protein MukB	NA	NA	NA	NA
1078573:1078592	attL	NA	NA	NA	NA
WP_000925872.1\|1083278_1085120_+	L,D-transpeptidase	NA	NA	NA	NA
WP_000357052.1\|1085379_1085928_+	YcbK family protein	A0A0K1LKR7	Rhodobacter_phage	1.2e-05	33.7
WP_001109471.1\|1085955_1086603_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_000462653.1\|1086664_1087855_-	aspartate transaminase	NA	NA	NA	NA
WP_000977713.1\|1088039_1089131_-	porin OmpF	Q1MVN1	Enterobacteria_phage	2.2e-99	51.7
WP_000117870.1\|1089737_1091138_-\|tRNA	asparagine--tRNA ligase	A0A167RLM0	Powai_lake_megavirus	4.5e-81	35.1
WP_000762342.1\|1091338_1091800_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
WP_000544849.1\|1092116_1093331_+	diaminopropionate ammonia-lyase	NA	NA	NA	NA
WP_000893207.1\|1093575_1095012_+	sodium:alanine symporter family protein	NA	NA	NA	NA
WP_000191399.1\|1095089_1096292_-	nicotinate phosphoribosyltransferase	NA	NA	NA	NA
WP_022631098.1\|1096486_1097779_-\|integrase	site-specific integrase	S4TSP2	Salmonella_phage	1.0e-252	99.5
WP_000065276.1\|1097823_1098072_-	excisionase family protein	S4TND0	Salmonella_phage	4.7e-42	100.0
WP_001237031.1\|1098112_1098352_-	DUF4060 family protein	S4TR31	Salmonella_phage	2.0e-37	100.0
WP_014344386.1\|1098394_1099552_-	recombinase RecT	S4TTE8	Salmonella_phage	7.9e-217	99.7
WP_020899444.1\|1099514_1102715_-	exodeoxyribonuclease	S4TNL0	Salmonella_phage	0.0e+00	78.8
WP_023139985.1\|1102841_1103192_-	hypothetical protein	S4TSN6	Salmonella_phage	3.5e-59	94.0
WP_000917559.1\|1103240_1103372_-	hypothetical protein	H6WRX3	Salmonella_phage	1.2e-17	97.7
WP_000981510.1\|1103668_1104103_-	helix-turn-helix domain-containing protein	H6WRX4	Salmonella_phage	2.5e-14	38.2
WP_001555460.1\|1104208_1104436_+	transcriptional regulator	H6WRX5	Salmonella_phage	1.7e-14	45.9
WP_000426364.1\|1104470_1104791_+	hypothetical protein	A0A0M4RU01	Salmonella_phage	1.3e-52	100.0
WP_000062943.1\|1104875_1105859_+	hypothetical protein	H6WRX7	Salmonella_phage	2.1e-162	99.3
WP_000800012.1\|1105861_1106611_+	ATP-binding protein	S4TNF5	Salmonella_phage	4.3e-139	100.0
WP_020899441.1\|1106621_1106969_+	DUF977 family protein	H6WRX9	Salmonella_phage	1.8e-52	90.4
WP_000065109.1\|1106965_1107424_+	ead/Ea22-like family protein	S4TNP2	Salmonella_phage	7.1e-44	77.4
WP_000850457.1\|1107427_1107736_+	hypothetical protein	A0A1P8DTP0	Salmonella_phage	1.8e-30	69.3
WP_000208142.1\|1107739_1108384_+	hypothetical protein	H6WRY2	Salmonella_phage	1.8e-29	40.7
WP_001536080.1\|1108383_1108641_+	hypothetical protein	NA	NA	NA	NA
WP_000493384.1\|1108695_1109673_-	DUF4868 domain-containing protein	NA	NA	NA	NA
WP_022630855.1\|1109684_1110281_-	hypothetical protein	NA	NA	NA	NA
WP_000861985.1\|1110872_1111106_+	DinI-like family protein	A0A0M4REN2	Salmonella_phage	1.2e-31	87.0
WP_000763780.1\|1111215_1111437_+	hypothetical protein	NA	NA	NA	NA
WP_000929788.1\|1111521_1112124_+	DUF1367 family protein	A0A0M4QX23	Salmonella_phage	7.5e-110	99.0
WP_001096542.1\|1112332_1112944_+	hypothetical protein	A0A0M4RU10	Salmonella_phage	2.7e-91	98.0
WP_000801757.1\|1112940_1113081_+	YlcG family protein	A0A0M5M7B2	Salmonella_phage	7.2e-08	78.9
WP_001097242.1\|1113077_1113767_+	antitermination protein	I6PDF8	Cronobacter_phage	1.1e-59	50.6
WP_001534733.1\|1113961_1114087_+	hypothetical protein	NA	NA	NA	NA
WP_000798705.1\|1114222_1114672_-	hypothetical protein	NA	NA	NA	NA
WP_001141973.1\|1115032_1115719_-\|protease	type III secretion system effector protease GtgA	Q9MBM0	Phage_Gifsy-2	2.1e-132	100.0
WP_077248428.1\|1115994_1116324_+\|holin	phage holin, lambda family	A0A0M3ULK9	Salmonella_phage	2.9e-55	99.1
WP_000984584.1\|1116307_1116760_+	lysozyme	A0A0M4R365	Salmonella_phage	7.9e-80	98.0
WP_024143045.1\|1116777_1117224_+\|lysis	lysis protein	A0A0M4RD57	Salmonella_phage	1.2e-64	90.4
WP_000867564.1\|1117692_1118238_+\|terminase	terminase small subunit	K7P7G0	Enterobacteria_phage	4.5e-53	61.3
WP_020899435.1\|1119358_1119691_+\|tail	phage tail protein	A5LH39	Enterobacteria_phage	4.4e-35	61.5
WP_000725267.1\|1119790_1120288_+	outer membrane beta-barrel protein	A0A1B0VBR9	Salmonella_phage	1.4e-16	36.6
WP_000877926.1\|1120404_1120938_-	superoxide dismutase [Cu-Zn]	Q9MC02	Salmonella_phage	1.8e-46	54.0
WP_001152415.1\|1121027_1121723_+\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	1.3e-89	66.7
WP_000606351.1\|1121732_1122470_+\|tail	phage tail protein	A0A0P0ZE89	Stx2-converting_phage	1.6e-114	76.1
WP_001576012.1\|1122367_1123072_+\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	2.4e-67	63.1
WP_000033415.1\|1123143_1126494_+	host specificity protein J	A0A0K2FI38	Escherichia_phage	0.0e+00	68.6
WP_000178849.1\|1126532_1126775_+	hypothetical protein	NA	NA	NA	NA
WP_031247858.1\|1126828_1129267_+\|tail	tail protein	A0A0K2FIZ6	Escherichia_phage	7.5e-92	63.8
WP_000143167.1\|1129266_1129848_+\|tail	tail fiber assembly protein	A0A0M4RTP2	Salmonella_phage	1.7e-95	89.5
WP_001674638.1\|1130323_1131292_+	SPI-2 type III secretion system effector SseI	Q9MBL9	Phage_Gifsy-2	3.0e-193	99.4
WP_000334547.1\|1131939_1132566_-	SOS response-associated peptidase	A0A2H4J5W2	uncultured_Caudovirales_phage	1.4e-66	63.2
WP_031603423.1\|1132634_1132934_-	hypothetical protein	NA	NA	NA	NA
WP_001525490.1\|1132918_1133605_-	hypothetical protein	NA	NA	NA	NA
WP_000497441.1\|1133875_1134067_-	DinI-like family protein	S4TNM0	Salmonella_phage	6.2e-26	95.2
WP_000193784.1\|1134493_1137106_+	aminopeptidase N	A0A0P0IY26	Acinetobacter_phage	6.3e-20	22.6
WP_000291723.1\|1137313_1138324_+	quinone-dependent dihydroorotate dehydrogenase	NA	NA	NA	NA
WP_001220671.1\|1138489_1139032_+	cell division protein ZapC	NA	NA	NA	NA
WP_000224069.1\|1139028_1140138_-	MOSC domain-containing protein	NA	NA	NA	NA
WP_001086485.1\|1140236_1142345_+	bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL	NA	NA	NA	NA
WP_000053044.1\|1142357_1144265_+	ABC transporter ATP-binding protein	A0A2K9L3Z8	Tupanvirus	2.4e-53	29.8
1142469:1142488	attR	NA	NA	NA	NA
WP_000333152.1\|1144279_1145533_+	membrane integrity-associated transporter subunit PqiA	NA	NA	NA	NA
WP_000433414.1\|1145537_1147178_+	intermembrane transport protein PqiB	NA	NA	NA	NA
WP_000759136.1\|1147174_1147738_+	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA
WP_001537784.1\|1147993_1148161_+	ribosome modulation factor	NA	NA	NA	NA
WP_000227928.1\|1148260_1148779_-	bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase	NA	NA	NA	NA
WP_000156454.1\|1148847_1150608_-\|protease	Lon protease family protein	NA	NA	NA	NA
WP_000877172.1\|1150793_1151246_+	macrodomain Ter protein MatP	NA	NA	NA	NA
WP_001674965.1\|1151317_1152370_-	porin OmpA	NA	NA	NA	NA
WP_000288732.1\|1152726_1153236_-	cell division inhibitor SulA	NA	NA	NA	NA
WP_001202375.1\|1153452_1154058_+	TfoX/Sxy family DNA transformation protein	NA	NA	NA	NA
WP_000950880.1\|1154044_1156198_-	TIGR01666 family membrane protein	NA	NA	NA	NA
WP_001261222.1\|1156216_1156663_-	YccF domain-containing protein	NA	NA	NA	NA
WP_022630854.1\|1156786_1158841_+	DNA helicase IV	A0A1P8CWU5	Bacillus_phage	1.1e-08	23.8
WP_000424187.1\|1158876_1159335_-	methylglyoxal synthase	NA	NA	NA	NA
WP_000847719.1\|1159429_1160092_-	DUF2057 family protein	NA	NA	NA	NA
WP_001537782.1\|1160265_1160679_+	CoA-binding protein	NA	NA	NA	NA
WP_000561983.1\|1160723_1161041_-	heat shock protein HspQ	NA	NA	NA	NA
WP_000140480.1\|1161098_1162310_-	23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI	NA	NA	NA	NA
WP_000859419.1\|1162524_1163073_+	YbhB/YbcL family Raf kinase inhibitor-like protein	NA	NA	NA	NA
WP_000548082.1\|1163098_1163878_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000072884.1\|1163926_1164208_+	acylphosphatase	NA	NA	NA	NA
WP_000904446.1\|1164204_1164534_-	sulfurtransferase TusE	NA	NA	NA	NA
WP_000374050.1\|1164620_1165280_-\|protease	FtsH protease modulator YccA	A0A2H4JFM9	uncultured_Caudovirales_phage	2.3e-43	51.9
WP_000938191.1\|1165900_1166581_-\|protease	type III secretion system effector protease PipA	Q9MBM0	Phage_Gifsy-2	8.3e-81	70.6

DBSCAN-SWA_4

1865959 : 1946927

Enterobacteria_phage(75.0%)

protease,capsid,plate,terminase,head,portal,tRNA,integrase,tail,transposase,holin

attL 1858049:1858064|attR 1942208:1942223

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1858049:1858064	attL	NA	NA	NA	NA
WP_000173208.1\|1865959_1867216_-\|tRNA	glutamyl-tRNA reductase	NA	NA	NA	NA
WP_000174484.1\|1867529_1868153_+	lipoprotein localization protein LolB	NA	NA	NA	NA
WP_000988246.1\|1868149_1869001_+	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	NA	NA	NA	NA
WP_001518537.1\|1869266_1870214_+	ribose-phosphate diphosphokinase	A0A2K9L2G2	Tupanvirus	8.6e-44	37.8
WP_001037181.1\|1870338_1872024_+	C4-dicarboxylic acid transporter DauA	A0A2H4J153	uncultured_Caudovirales_phage	3.9e-23	23.3
WP_000823878.1\|1872068_1872347_-	stress-induced protein YchH	NA	NA	NA	NA
WP_000985595.1\|1872622_1873207_+\|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA
WP_000505850.1\|1873323_1874415_+	redox-regulated ATPase YchF	NA	NA	NA	NA
WP_000794388.1\|1874573_1875839_-	DUF4427 domain-containing protein	NA	NA	NA	NA
WP_001058312.1\|1876333_1877452_+	hydrogenase 1 small subunit	NA	NA	NA	NA
WP_000070978.1\|1877448_1879242_+	Ni/Fe-hydrogenase large subunit	NA	NA	NA	NA
WP_000147036.1\|1879260_1879992_+	Ni/Fe-hydrogenase b-type cytochrome subunit	NA	NA	NA	NA
WP_000993803.1\|1879988_1880585_+\|protease	hydrogenase 1 maturation protease	NA	NA	NA	NA
WP_001262581.1\|1880574_1880979_+	hydrogenase-1 operon protein HyaE	NA	NA	NA	NA
WP_000063377.1\|1880975_1881824_+	hydrogenase expression/formation protein	NA	NA	NA	NA
WP_000263610.1\|1881898_1883443_+	cytochrome bd-II oxidase subunit 1	NA	NA	NA	NA
WP_000888114.1\|1883454_1884591_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA
WP_000270301.1\|1884603_1884693_+	cytochrome bd-II oxidase subunit CbdX	NA	NA	NA	NA
WP_001526439.1\|1885087_1886362_+	Glu/Leu/Phe/Val dehydrogenase	NA	NA	NA	NA
WP_000612821.1\|1886575_1888288_+	alpha,alpha-trehalase	NA	NA	NA	NA
WP_000511323.1\|1888350_1888605_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA
WP_000017421.1\|1888773_1889508_+	flagellar brake protein YcgR	NA	NA	NA	NA
WP_000776974.1\|1889521_1890133_-	membrane-bound lytic murein transglycosylase EmtA	NA	NA	NA	NA
WP_000051601.1\|1890303_1891218_+	muramoyltetrapeptide carboxypeptidase	NA	NA	NA	NA
WP_000338376.1\|1891314_1893048_+	potassium/proton antiporter	NA	NA	NA	NA
WP_000197903.1\|1893110_1894181_-	catabolic alanine racemase DadX	NA	NA	NA	NA
WP_001266937.1\|1894194_1895493_-	D-amino acid dehydrogenase	NA	NA	NA	NA
WP_001240769.1\|1895815_1897348_+	SpoVR family protein	NA	NA	NA	NA
WP_000234826.1\|1897394_1898114_-	fatty acid metabolism transcriptional regulator FadR	NA	NA	NA	NA
WP_000406435.1\|1898333_1899878_+	Na(+)/H(+) antiporter NhaB	NA	NA	NA	NA
WP_000943475.1\|1900019_1900550_+	disulfide bond formation protein DsbB	NA	NA	NA	NA
WP_000215756.1\|1900681_1901488_-	site-specific DNA-methyltransferase	Q775B4	Bordetella_phage	1.5e-65	53.2
WP_001353016.1\|1901432_1901630_-	Com family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_001519189.1\|1901822_1902119_-	zinc-ribbon domain and TM2 domain-containing protein	M4ZS56	Bacillus_phage	9.0e-16	67.2
WP_000078916.1\|1902254_1902395_-	Hok/Gef family protein	A0A0A7NPZ4	Enterobacteria_phage	1.5e-18	97.8
WP_001383550.1\|1902585_1902846_-	ogr/Delta-like zinc finger family protein	NA	NA	NA	NA
WP_001763778.1\|1902888_1903989_-	phage late control D family protein	A0A0A7NQ97	Enterobacteria_phage	6.0e-206	99.7
WP_000005430.1\|1904146_1905331_+\|tail	phage tail sheath family protein	A0A0A7NV69	Enterobacteria_phage	3.4e-223	98.2
WP_000290450.1\|1905330_1905843_+\|tail	phage major tail tube protein	A0A0A7NPV8	Enterobacteria_phage	3.2e-93	100.0
WP_000651563.1\|1905898_1906273_+	hypothetical protein	A0A0A7NPZ0	Enterobacteria_phage	2.6e-36	72.4
WP_000333503.1\|1906281_1906437_+\|tail	GpE family phage tail protein	A0A0A7NQ96	Enterobacteria_phage	9.7e-22	96.1
WP_024144064.1\|1906423_1909231_+\|tail	phage tail tape measure protein	A0A0A7NRZ9	Enterobacteria_phage	0.0e+00	92.7
WP_022631005.1\|1909243_1909732_+\|tail	phage tail protein	A0A0A7NV65	Enterobacteria_phage	3.0e-85	98.8
WP_022631004.1\|1909758_1910358_-	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	3.4e-86	86.3
WP_022631029.1\|1911727_1912261_-\|tail	tail fiber assembly protein	A0A1S6KZZ1	Salmonella_phage	8.7e-78	80.9
WP_065305617.1\|1912263_1914132_-	hypothetical protein	Q7Y4D4	Escherichia_virus	1.8e-157	55.0
WP_000071724.1\|1914128_1914737_-\|tail	phage tail protein I	A0A0F7LA36	Escherichia_phage	1.5e-86	74.9
WP_001111954.1\|1914729_1915626_-\|plate	baseplate assembly protein	A0A0A7NPY5	Enterobacteria_phage	3.3e-154	97.7
WP_000213447.1\|1915629_1915980_-\|plate	baseplate assembly protein	A0A0A7NQ90	Enterobacteria_phage	9.2e-60	100.0
WP_001271888.1\|1915976_1916558_-\|plate	phage baseplate assembly protein V	A0A0A7NRZ3	Enterobacteria_phage	6.1e-101	96.9
WP_000356339.1\|1916554_1917190_-	phage virion morphogenesis protein	A0A0A7NV60	Enterobacteria_phage	1.1e-114	100.0
WP_000920594.1\|1917182_1917650_-\|tail	phage tail protein	A0A0A7NPU6	Enterobacteria_phage	2.6e-86	100.0
WP_000780549.1\|1917787_1918195_-	DUF2570 domain-containing protein	A0A0A7NPY2	Enterobacteria_phage	4.6e-63	94.8
WP_000072327.1\|1918191_1918584_-	M15 family metallopeptidase	A0A0A7NQ86	Enterobacteria_phage	5.8e-71	100.0
WP_000104350.1\|1918580_1918904_-\|holin	holin	A0A0A7NRY9	Enterobacteria_phage	1.6e-50	99.1
WP_000864901.1\|1918906_1919107_-\|tail	tail protein	A0A0A7NV57	Enterobacteria_phage	3.5e-32	100.0
WP_000063103.1\|1919106_1919601_-\|head	head completion/stabilization protein	A0A0A7NPU2	Enterobacteria_phage	1.2e-89	99.4
WP_000632335.1\|1919702_1920503_-\|terminase	terminase	A0A0A7NPX9	Enterobacteria_phage	2.3e-130	91.7
WP_022631073.1\|1920548_1921601_-\|capsid	phage major capsid protein, P2 family	A0A0A7NQ82	Enterobacteria_phage	3.7e-197	99.1
WP_001262654.1\|1921623_1922460_-\|capsid	phage capsid scaffolding protein	A0A0A7NRY7	Enterobacteria_phage	7.9e-150	99.3
WP_000613782.1\|1922614_1924366_+\|terminase	terminase	A0A0A7NV54	Enterobacteria_phage	0.0e+00	97.8
WP_000087812.1\|1924365_1925412_+\|portal	phage portal protein	A0A0A7NPT9	Enterobacteria_phage	1.5e-206	100.0
WP_022631072.1\|1925915_1926440_-	ead/Ea22-like family protein	Q8HAA6	Salmonella_phage	8.4e-33	52.0
WP_022631071.1\|1926436_1926961_-	hypothetical protein	NA	NA	NA	NA
WP_001163773.1\|1927024_1927360_-	hypothetical protein	A0A0A7NV51	Enterobacteria_phage	4.1e-49	90.7
WP_000211257.1\|1927423_1927735_-	hypothetical protein	A0A0A7NPT5	Enterobacteria_phage	7.2e-48	96.1
WP_022631070.1\|1927739_1928699_-	recombinase	A0A0A7NPX4	Enterobacteria_phage	4.9e-180	99.4
WP_031247798.1\|1928764_1931617_-	replication endonuclease	A0A0A7NQ77	Enterobacteria_phage	0.0e+00	88.3
WP_022631086.1\|1931613_1932003_-	hypothetical protein	NA	NA	NA	NA
WP_157878345.1\|1931999_1932617_-	hypothetical protein	S5MQL6	Escherichia_phage	2.1e-06	46.2
WP_000104303.1\|1932628_1932928_-	hypothetical protein	A0A0A7NRX6	Enterobacteria_phage	8.2e-41	88.9
WP_000153700.1\|1932924_1933191_-	winged helix-turn-helix transcriptional regulator	A0A0A7NV47	Enterobacteria_phage	2.0e-30	75.9
WP_000985163.1\|1933187_1933391_-	hypothetical protein	A0A0A7NPS8	Enterobacteria_phage	1.9e-25	83.6
WP_001092663.1\|1933414_1933831_-	hypothetical protein	NA	NA	NA	NA
WP_000021654.1\|1933923_1934037_-	hypothetical protein	A0A0A7NPW7	Enterobacteria_phage	1.6e-10	97.3
WP_000514277.1\|1934033_1934276_-	DUF4754 family protein	A0A0A7NQ71	Enterobacteria_phage	2.3e-38	100.0
WP_000159462.1\|1934287_1934566_-	hypothetical protein	A0A0A7NRX5	Enterobacteria_phage	3.6e-35	81.5
WP_000813365.1\|1934576_1934918_-	DUF4761 family protein	A0A0A7NV42	Enterobacteria_phage	5.1e-55	92.2
WP_001001394.1\|1934936_1935263_-	hypothetical protein	NA	NA	NA	NA
WP_001242988.1\|1935358_1935661_+	helix-turn-helix transcriptional regulator	Q1JS63	Enterobacteria_phage	2.3e-19	52.0
WP_001440068.1\|1935694_1936717_+\|integrase	tyrosine-type recombinase/integrase	Q83VS6	Escherichia_phage	2.7e-99	53.5
WP_000018967.1\|1936908_1937250_+	DUF1971 domain-containing protein	NA	NA	NA	NA
WP_001083582.1\|1937321_1937495_-	addiction module toxin, GnsA/GnsB family	NA	NA	NA	NA
WP_001519337.1\|1937686_1937824_-	hypothetical protein	NA	NA	NA	NA
WP_000785857.1\|1938175_1938637_-	YcgN family cysteine cluster protein	NA	NA	NA	NA
WP_024144067.1\|1938714_1939374_-	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA
WP_001525604.1\|1939423_1939717_-	hypothetical protein	NA	NA	NA	NA
WP_000072527.1\|1939842_1940550_+	septum site-determining protein MinC	NA	NA	NA	NA
WP_000101047.1\|1940573_1941386_+	septum site-determining protein MinD	NA	NA	NA	NA
WP_001185666.1\|1941389_1941656_+	cell division topological specificity factor MinE	NA	NA	NA	NA
WP_001109130.1\|1941777_1942905_-	ribonuclease D	NA	NA	NA	NA
1942208:1942223	attR	NA	NA	NA	NA
WP_000502119.1\|1943039_1943498_-\|transposase	IS200/IS605-like element IS200F family transposase	I4AZI8	Saccharomonospora_phage	1.0e-13	31.5
WP_000758418.1\|1943688_1945374_-	long-chain-fatty-acid--CoA ligase FadD	A0A2H4PQM9	Staphylococcus_phage	3.8e-34	26.0
WP_000290594.1\|1945578_1946160_-	Slp family lipoprotein	NA	NA	NA	NA
WP_001221014.1\|1946231_1946927_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	NA	NA	NA	NA

DBSCAN-SWA_5

1991944 : 1998753

Salmonella_phage(33.33%)

tail,integrase

attL 1986807:1986829|attR 1996522:1996544

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1986807:1986829	attL	NA	NA	NA	NA
WP_031247788.1\|1991944_1992826_-\|tail	tail assembly protein	A0A0M4RTP2	Salmonella_phage	2.2e-65	76.0
WP_001521334.1\|1993298_1993487_+	hypothetical protein	NA	NA	NA	NA
WP_000789530.1\|1993551_1993719_+	lytic enzyme	NA	NA	NA	NA
WP_001050882.1\|1993975_1994509_-	DUF2514 domain-containing protein	A0A291LBG9	Klebsiella_phage	1.4e-11	48.3
WP_001013467.1\|1994562_1994793_-	hypothetical protein	Q8HA86	Salmonella_phage	6.1e-28	93.7
WP_010989030.1\|1994982_1995477_+	hypothetical protein	A0A0U2I1R6	Escherichia_phage	8.2e-22	68.9
WP_001520095.1\|1995536_1996391_+\|integrase	tyrosine-type recombinase/integrase	A0A2H4IYC8	uncultured_Caudovirales_phage	3.6e-73	50.9
WP_000722368.1\|1996764_1997118_-	YebY family protein	NA	NA	NA	NA
1996522:1996544	attR	NA	NA	NA	NA
WP_000979702.1\|1997134_1998010_-	copper homeostasis membrane protein CopD	NA	NA	NA	NA
WP_000168393.1\|1998010_1998385_-	CopC domain-containing protein YobA	NA	NA	NA	NA
WP_000856224.1\|1998522_1998753_+	DNA polymerase III subunit theta	H9C187	Pectobacterium_phage	2.9e-14	60.3

DBSCAN-SWA_6

2074203 : 2152863

104

Salmonella_phage(81.16%)

capsid,protease,plate,terminase,head,portal,integrase,tail,transposase,holin

attL 2080741:2080756|attR 2154486:2154501

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000502119.1\|2074203_2074662_-\|transposase	IS200/IS605-like element IS200F family transposase	I4AZI8	Saccharomonospora_phage	1.0e-13	31.5
WP_000659236.1\|2074842_2076048_-	lysine-N-methylase	NA	NA	NA	NA
WP_000079806.1\|2076126_2077614_-	flagellin FliC	NA	NA	NA	NA
WP_000146802.1\|2077870_2079274_+	flagellar filament capping protein FliD	NA	NA	NA	NA
WP_000287764.1\|2079288_2079696_+	flagellar export chaperone FliS	NA	NA	NA	NA
WP_000204899.1\|2079695_2080064_+	flagella biosynthesis regulatory protein FliT	NA	NA	NA	NA
WP_022630963.1\|2080135_2081620_+	alpha-amylase	NA	NA	NA	NA
2080741:2080756	attL	NA	NA	NA	NA
WP_000754695.1\|2081659_2082085_-	lipoprotein	NA	NA	NA	NA
WP_001535233.1\|2082270_2083476_+	selenium metabolism membrane protein YedE/FdhT	NA	NA	NA	NA
WP_000790504.1\|2083472_2083706_+	sulfurtransferase-like selenium metabolism protein YedF	NA	NA	NA	NA
WP_000639596.1\|2083970_2084357_+	hypothetical protein	NA	NA	NA	NA
WP_000719036.1\|2084476_2084791_-	flagellar hook-basal body complex protein FliE	NA	NA	NA	NA
WP_001276834.1\|2085007_2086690_+	flagellar basal body M-ring protein FliF	NA	NA	NA	NA
WP_000067735.1\|2086682_2087678_+	flagellar motor switch protein FliG	NA	NA	NA	NA
WP_000064163.1\|2087670_2088378_+	flagellar assembly protein FliH	NA	NA	NA	NA
WP_000213257.1\|2088377_2089748_+	flagellum-specific ATP synthase FliI	NA	NA	NA	NA
WP_000046981.1\|2089769_2090213_+	flagella biosynthesis chaperone FliJ	NA	NA	NA	NA
WP_000631669.1\|2090209_2091427_+	flagellar hook length control protein FliK	NA	NA	NA	NA
WP_000132169.1\|2091531_2091999_+	flagellar basal body-associated protein FliL	NA	NA	NA	NA
WP_000502811.1\|2092003_2093008_+	flagellar motor switch protein FliM	NA	NA	NA	NA
WP_001282115.1\|2093004_2093418_+	flagellar motor switch protein FliN	NA	NA	NA	NA
WP_000978276.1\|2093417_2093795_+	flagellar type III secretion system protein FliO	NA	NA	NA	NA
WP_001253410.1\|2093794_2094532_+	flagellar type III secretion system pore protein FliP	NA	NA	NA	NA
WP_000187355.1\|2094541_2094811_+	flagellar biosynthesis protein FliQ	NA	NA	NA	NA
WP_000616953.1\|2094819_2095614_+	flagellar type III secretion system protein FliR	NA	NA	NA	NA
WP_000103974.1\|2095895_2096519_+	transcriptional regulator RcsA	NA	NA	NA	NA
WP_071524019.1\|2096557_2096806_-	protein DsrB	NA	NA	NA	NA
WP_000844798.1\|2096880_2097108_+	YodD family peroxide/acid resistance protein	NA	NA	NA	NA
WP_000948794.1\|2097417_2098233_+	mannosyl-3-phosphoglycerate phosphatase-related protein	NA	NA	NA	NA
WP_001119821.1\|2098211_2099924_-	cellulose biosynthesis regulator YedQ	A0A127AWB9	Bacillus_phage	1.2e-19	37.4
WP_001178599.1\|2100088_2100334_-	YodC family protein	NA	NA	NA	NA
WP_000929134.1\|2100350_2101262_-	DUF808 domain-containing protein	NA	NA	NA	NA
WP_001212264.1\|2101437_2102358_+	drug/metabolite exporter YedA	NA	NA	NA	NA
WP_000785978.1\|2102346_2102817_-	very short patch repair endonuclease	E5E3X5	Burkholderia_phage	1.2e-30	46.9
WP_001157322.1\|2102797_2104228_-	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	1.0e-104	57.4
WP_000377041.1\|2104301_2104997_-	phosphohydrolase	A0A1D6Y7U0	Golden_Marseillevirus	2.8e-07	27.1
WP_000107430.1\|2105088_2105388_-	membrane protein	NA	NA	NA	NA
WP_001080680.1\|2106037_2107234_+	porin OmpS1	Q1MVN1	Enterobacteria_phage	1.8e-110	56.1
WP_024131109.1\|2107494_2107683_-	hypothetical protein	NA	NA	NA	NA
WP_000208509.1\|2107693_2107906_-	cold-shock protein	A0A1W6JNX5	Morganella_phage	3.9e-21	70.0
WP_000457662.1\|2108360_2109629_-	Y-family DNA polymerase	I6RSM4	Salmonella_phage	4.2e-227	92.2
WP_000394196.1\|2109631_2110051_-	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	8.5e-36	60.5
WP_000500831.1\|2110177_2110339_-	hypothetical protein	NA	NA	NA	NA
WP_001093793.1\|2111532_2111745_+	hypothetical protein	A0A192Y5V6	Salmonella_phage	2.7e-30	100.0
WP_000842532.1\|2111741_2112155_+	hypothetical protein	A0A192Y6F0	Salmonella_phage	2.9e-73	100.0
WP_122815478.1\|2112202_2112316_+	hypothetical protein	A0A1C9IHU6	Salmonella_phage	4.3e-11	100.0
WP_000836773.1\|2112390_2112624_+	hypothetical protein	A0A192Y6D5	Salmonella_phage	1.2e-36	100.0
WP_022742744.1\|2112737_2113343_-\|tail	tail fiber assembly protein	A0A192Y8L2	Salmonella_phage	2.7e-107	100.0
WP_020899405.1\|2113312_2114875_-	hypothetical protein	A0A192Y7M1	Salmonella_phage	1.0e-288	100.0
WP_001207832.1\|2114861_2115449_-	DUF2313 domain-containing protein	A0A192Y5V3	Salmonella_phage	2.9e-114	100.0
WP_000785578.1\|2115451_2116531_-\|plate	baseplate J/gp47 family protein	A0A192Y6E4	Salmonella_phage	2.9e-205	100.0
WP_000605051.1\|2116523_2116937_-	hypothetical protein	A0A192Y6D0	Salmonella_phage	3.1e-75	100.0
WP_001273648.1\|2116941_2117475_-\|plate	phage baseplate assembly protein	A0A192Y8K5	Salmonella_phage	8.4e-97	100.0
WP_001066630.1\|2117474_2118533_-\|plate	baseplate protein	A0A192Y7L7	Salmonella_phage	1.3e-202	100.0
WP_000863827.1\|2118529_2119870_-	DNA circularization protein	A0A192Y5U9	Salmonella_phage	5.2e-252	100.0
WP_000785390.1\|2119903_2121832_-\|tail	phage tail tape measure protein	A0A192Y6D8	Salmonella_phage	0.0e+00	100.0
WP_022742746.1\|2121916_2122210_-	hypothetical protein	A0A192Y6C5	Salmonella_phage	2.6e-47	100.0
WP_000515952.1\|2122239_2122596_-\|tail	tail protein	A0A192Y8K0	Salmonella_phage	2.6e-62	100.0
WP_001007996.1\|2122595_2124092_-\|tail	tail sheath protein	A0A192Y7L1	Salmonella_phage	2.1e-278	100.0
WP_000497740.1\|2124081_2124246_-	DUF2635 domain-containing protein	A0A1C9II04	Salmonella_phage	1.3e-24	100.0
WP_000779216.1\|2124249_2124810_-	hypothetical protein	A0A192Y5U4	Salmonella_phage	8.0e-106	100.0
WP_001135699.1\|2124806_2125319_-	hypothetical protein	A0A192Y6D2	Salmonella_phage	3.5e-92	100.0
WP_000702410.1\|2125290_2125695_-\|head	phage head closure protein	A0A192Y6C2	Salmonella_phage	3.2e-72	100.0
WP_000927378.1\|2125691_2126015_-\|head,tail	phage gp6-like head-tail connector protein	A0A192Y8J4	Salmonella_phage	6.3e-55	100.0
WP_000601352.1\|2126017_2126218_-	hypothetical protein	A0A192Y7K5	Salmonella_phage	1.8e-28	100.0
WP_000257526.1\|2126268_2127474_-\|capsid	phage major capsid protein	A0A192Y5T6	Salmonella_phage	7.0e-224	100.0
WP_001193639.1\|2127488_2128139_-\|head,protease	HK97 family phage prohead protease	Q8HAD3	Salmonella_phage	1.5e-119	100.0
WP_020899404.1\|2128116_2129358_-\|portal	phage portal protein	Q8HAD4	Salmonella_phage	2.9e-241	99.3
WP_000605609.1\|2129357_2129540_-	hypothetical protein	Q8HAD5	Salmonella_phage	1.0e-25	100.0
WP_000088175.1\|2129551_2131285_-\|terminase	terminase large subunit	U5P0Q5	Shigella_phage	0.0e+00	98.3
WP_000929171.1\|2131281_2131776_-\|terminase	phage terminase small subunit P27 family	A0A1B3B2F4	Salmonella_phage	1.7e-88	100.0
WP_001135098.1\|2131901_2132252_-	HNH endonuclease	M1FQV2	Enterobacteria_phage	9.8e-62	94.8
WP_001379492.1\|2132302_2132635_-	hypothetical protein	A0A192Y5Y1	Salmonella_phage	2.8e-58	100.0
WP_001530346.1\|2133097_2133490_-	DUF2570 domain-containing protein	A0A192Y6H8	Salmonella_phage	2.8e-65	100.0
WP_001624504.1\|2133486_2134101_-	glycoside hydrolase family 19 protein	A0A192Y6G4	Salmonella_phage	5.7e-113	100.0
WP_000422366.1\|2134100_2134382_-\|holin	phage holin family protein	K7PKN9	Enterobacterial_phage	9.7e-20	45.2
WP_001283169.1\|2134368_2134755_-	membrane protein	A0A192Y8P2	Salmonella_phage	7.0e-61	100.0
WP_001624505.1\|2134900_2135158_-	hypothetical protein	A0A1C9IHX4	Salmonella_phage	3.1e-41	100.0
WP_020899401.1\|2135308_2136061_-	antitermination protein	A0A192Y5X6	Salmonella_phage	1.8e-145	100.0
WP_020899400.1\|2136074_2137064_-	DUF968 domain-containing protein	A0A1C9IHZ5	Salmonella_phage	4.0e-193	99.1
WP_020899399.1\|2137071_2137932_-	KilA-N domain-containing protein	Q8HA92	Salmonella_phage	8.4e-163	99.7
WP_001241579.1\|2137948_2138338_-	RusA family crossover junction endodeoxyribonuclease	Q8HA93	Salmonella_phage	3.7e-70	100.0
WP_000066908.1\|2138334_2139228_-	phage N-6-adenine-methyltransferase	Q8HA94	Salmonella_phage	7.6e-175	100.0
WP_001684745.1\|2139227_2139710_-	PerC family transcriptional regulator	Q8HA95	Salmonella_phage	1.1e-87	100.0
WP_000061500.1\|2139711_2140530_-	helix-turn-helix domain-containing protein	Q8HA96	Salmonella_phage	2.8e-136	100.0
WP_000620702.1\|2140526_2140751_-	hypothetical protein	A0A1C9II64	Salmonella_phage	3.3e-39	100.0
WP_001087402.1\|2140747_2141905_-	peptidase	Q8HA97	Salmonella_phage	4.2e-218	100.0
WP_000509731.1\|2141901_2142456_-	hypothetical protein	A0A1C9II13	Salmonella_phage	6.9e-102	100.0
WP_001191666.1\|2142484_2142709_-	helix-turn-helix transcriptional regulator	A0A1C9IHV8	Salmonella_phage	1.9e-34	100.0
WP_001020636.1\|2142806_2143502_+	helix-turn-helix transcriptional regulator	Q8HAA0	Salmonella_phage	3.2e-128	100.0
WP_001067432.1\|2143707_2144046_+	hypothetical protein	A0A1C9IHZ4	Salmonella_phage	7.0e-57	100.0
WP_023891434.1\|2144008_2144233_-	hypothetical protein	A0A1C9IHY8	Salmonella_phage	1.6e-33	100.0
WP_000997191.1\|2144772_2145144_+	hypothetical protein	A0A192Y6G0	Salmonella_phage	2.5e-63	100.0
WP_000080416.1\|2145201_2146029_+	YfdQ family protein	A0A192Y6E5	Salmonella_phage	2.6e-153	100.0
WP_000008351.1\|2146165_2146705_+	hypothetical protein	A0A192Y8M4	Salmonella_phage	2.6e-98	100.0
WP_000215886.1\|2146775_2147309_+	hypothetical protein	A0A192Y7N1	Salmonella_phage	2.5e-101	100.0
WP_000224241.1\|2147310_2147568_+	hypothetical protein	A0A192Y5W0	Salmonella_phage	1.3e-42	100.0
WP_020899398.1\|2147578_2148160_+	hypothetical protein	A0A192Y6F5	Salmonella_phage	4.7e-109	100.0
WP_001061334.1\|2148163_2148733_+	3'-5' exoribonuclease	A0A192Y6E0	Salmonella_phage	7.1e-110	100.0
WP_000414876.1\|2148757_2149000_+	DUF4224 domain-containing protein	Q8HAA9	Salmonella_phage	9.5e-40	100.0
WP_000532847.1\|2149001_2149991_+\|integrase	tyrosine-type recombinase/integrase	A0A192Y7M7	Salmonella_phage	8.6e-196	100.0
WP_000598920.1\|2150282_2151080_+	DgsA anti-repressor MtfA	NA	NA	NA	NA
WP_001738920.1\|2151451_2151742_+	DUF4102 domain-containing protein	H2BDA3	Pseudomonas_phage	3.0e-08	49.1
WP_001219015.1\|2152389_2152863_+	peptidase	A0A0F6TJ61	Escherichia_coli_O157_typing_phage	7.1e-39	77.6
2154486:2154501	attR	NA	NA	NA	NA

DBSCAN-SWA_7

2238857 : 2249363

Enterobacteria_phage(37.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000126349.1\|2238857_2240171_-	lipopolysaccharide biosynthesis protein RfbH	H8ZJ36	Ostreococcus_tauri_virus	7.0e-52	35.1
WP_000565905.1\|2240197_2241277_-	CDP-glucose 4,6-dehydratase	A0A222YY99	Synechococcus_phage	6.6e-16	24.1
WP_000648784.1\|2241281_2242055_-	glucose-1-phosphate cytidylyltransferase	NA	NA	NA	NA
WP_000018226.1\|2242051_2243044_-	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA
WP_000973708.1\|2243049_2243601_-	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	2.2e-52	58.0
WP_000857529.1\|2243601_2244480_-	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	9.3e-109	65.5
WP_001023662.1\|2244527_2245427_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	1.4e-30	36.3
WP_000697840.1\|2245426_2246512_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	1.2e-102	53.9
WP_000981469.1\|2246888_2247782_-	GalU regulator GalF	A0A127AW70	Bacillus_phage	4.8e-44	42.2
WP_001111841.1\|2247959_2249363_-	colanic acid biosynthesis protein WcaM	A0A291LBB9	Klebsiella_phage	3.1e-21	27.1

DBSCAN-SWA_8

2317671 : 2326842

Enterobacteria_phage(66.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_022631044.1\|2317671_2319705_+\|tRNA	methionine--tRNA ligase	A0A1V0SDF2	Indivirus	1.0e-54	27.6
WP_000703137.1\|2319945_2320404_+	YehR family lipoprotein	Q9EYF5	Enterobacteria_phage	8.4e-53	72.5
WP_001197952.1\|2320575_2321106_+	YehR family lipoprotein	NA	NA	NA	NA
WP_000950413.1\|2321162_2321630_-	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	3.9e-74	90.3
WP_000598637.1\|2321676_2322396_-	two-component system response regulator BtsR	NA	NA	NA	NA
WP_000272845.1\|2322392_2324078_-	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	6.2e-279	91.1
WP_001240418.1\|2324300_2325032_+	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	4.5e-101	87.9
WP_001261696.1\|2325091_2325199_+	protein YohO	NA	NA	NA	NA
WP_000824855.1\|2325179_2325911_-	ABC transporter permease	NA	NA	NA	NA
WP_000569166.1\|2325894_2326842_-	ABC transporter ATP-binding protein	F2Y1V5	Organic_Lake_phycodnavirus	3.7e-10	27.8

DBSCAN-SWA_9

2346249 : 2412645

Salmonella_phage(28.57%)

tail,holin,lysis

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000989296.1\|2346249_2346945_+\|lysis	CidB/LrgB family autolysis modulator	NA	NA	NA	NA
WP_000553526.1\|2347098_2347983_+	cytidine deaminase	NA	NA	NA	NA
WP_000920081.1\|2348159_2348879_+	outer membrane permeability protein SanA	NA	NA	NA	NA
WP_000605187.1\|2348875_2349121_+	DUF2542 family protein	NA	NA	NA	NA
WP_001136409.1\|2349325_2350567_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_000956095.1\|2350560_2351796_+	NAD-dependent dihydropyrimidine dehydrogenase subunit PreA	NA	NA	NA	NA
WP_001275101.1\|2351870_2352881_-	galactose/methyl galactoside ABC transporter permease MglC	NA	NA	NA	NA
WP_000535907.1\|2352896_2354417_-	galactose/methyl galactoside ABC transporter ATP-binding protein MglA	F2Y2R6	Organic_Lake_phycodnavirus	1.0e-09	31.9
WP_001036943.1\|2354550_2355549_-	galactose/glucose ABC transporter substrate-binding protein MglB	NA	NA	NA	NA
WP_000628631.1\|2356047_2357070_-	HTH-type transcriptional regulator GalS	NA	NA	NA	NA
WP_001526153.1\|2357219_2358362_-	DUF418 family protein	NA	NA	NA	NA
WP_001139611.1\|2358376_2359045_-	GTP cyclohydrolase I FolE	M1Q6X8	Cellulophaga_phage	4.1e-56	56.3
WP_000425488.1\|2359374_2360232_+	S-formylglutathione hydrolase	NA	NA	NA	NA
WP_000876817.1\|2360220_2360610_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000443208.1\|2360614_2361982_-	L-serine ammonia-lyase	NA	NA	NA	NA
WP_000022915.1\|2362198_2363086_+	phosphoserine phosphatase SerB	NA	NA	NA	NA
WP_000023807.1\|2363118_2364441_+	MFS transporter	NA	NA	NA	NA
WP_000488255.1\|2364484_2366476_-	catecholate siderophore receptor CirA	A0A0P0I887	Acinetobacter_phage	6.7e-14	37.9
WP_000535000.1\|2366821_2368291_-	lysine-specific permease	NA	NA	NA	NA
WP_000548308.1\|2368480_2369344_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_000137961.1\|2369464_2370514_+	YeiH family protein	NA	NA	NA	NA
WP_000873909.1\|2370592_2371450_+	deoxyribonuclease IV	A0A1V0SBL9	Catovirus	2.2e-22	28.5
WP_000854414.1\|2371514_2373203_-	PTS fructose transporter subunit IIBC	NA	NA	NA	NA
WP_000091249.1\|2373219_2374158_-	1-phosphofructokinase	NA	NA	NA	NA
WP_000487287.1\|2374157_2375288_-	fused PTS fructose transporter subunit IIA/HPr protein	NA	NA	NA	NA
WP_000551937.1\|2375656_2376838_+	sugar efflux transporter SetB	NA	NA	NA	NA
WP_001213882.1\|2376902_2377568_-	membrane protein	NA	NA	NA	NA
WP_001519564.1\|2377569_2377692_-	membrane protein	NA	NA	NA	NA
WP_010989043.1\|2378079_2378334_-	YkgJ family cysteine cluster protein	NA	NA	NA	NA
WP_001136822.1\|2378657_2379230_+	elongation factor P-like protein YeiP	NA	NA	NA	NA
WP_000169350.1\|2379442_2380429_+	GTP-binding protein	NA	NA	NA	NA
WP_000178095.1\|2380458_2381178_+	phosphatase PAP2 family protein	NA	NA	NA	NA
WP_000241015.1\|2381591_2382164_+	bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase	A0A1V0DZX6	Clostridioides_phage	8.1e-13	38.9
WP_000957746.1\|2382489_2384046_+	cyclic di-GMP phosphodiesterase	NA	NA	NA	NA
WP_000561748.1\|2384152_2385958_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_000501623.1\|2385967_2387062_+	microcin C ABC transporter permease YejB	NA	NA	NA	NA
WP_001137764.1\|2387061_2388087_+	ABC transporter permease	NA	NA	NA	NA
WP_000203622.1\|2388088_2389678_+	microcin C ABC transporter ATP-binding protein YejF	G9BWD6	Planktothrix_phage	8.5e-20	32.5
WP_001094639.1\|2389681_2390026_-	hypothetical protein	NA	NA	NA	NA
WP_000213347.1\|2390416_2391607_-	Bcr/CflA family multidrug efflux MFS transporter	S4TR35	Salmonella_phage	2.4e-19	22.2
WP_001234836.1\|2391634_2392330_-	16S rRNA pseudouridine(516) synthase RsuA	NA	NA	NA	NA
WP_000578121.1\|2392481_2394242_+	DEAD/DEAH box helicase	M4Q3N1	Vibrio_phage	1.9e-100	41.6
WP_000494192.1\|2394366_2394651_+	50S ribosomal protein L25	NA	NA	NA	NA
WP_000033440.1\|2394759_2395380_-	hypothetical protein	NA	NA	NA	NA
WP_000050806.1\|2395407_2396415_-	nucleoid-associated protein YejK	A0A1V0E8C0	Vibrio_phage	4.5e-83	48.3
WP_001135904.1\|2396594_2396822_+	YejL family protein	NA	NA	NA	NA
WP_000256150.1\|2396853_2398614_+	cardiolipin transport protein PbgA	NA	NA	NA	NA
WP_000806401.1\|2398894_2399398_-	LexA family transcriptional regulator	Q1MVE7	Enterobacteria_phage	9.5e-50	71.3
WP_000884778.1\|2399425_2399716_+	DinI family protein	S4TND2	Salmonella_phage	4.7e-25	83.3
WP_000639473.1\|2400063_2401893_+	acyltransferase	C6ZR20	Salmonella_phage	3.0e-61	29.6
WP_000022213.1\|2401946_2402390_-\|tail	tail fiber assembly protein	A0A0F7LDZ0	Escherichia_phage	1.4e-28	43.9
WP_001215679.1\|2402767_2403295_-\|tail	tail fiber assembly protein	A0A1S6KZZ1	Salmonella_phage	3.1e-11	31.3
WP_000554739.1\|2403297_2404539_-	hypothetical protein	Q8HAB4	Salmonella_phage	1.0e-52	95.3
WP_001120499.1\|2405131_2405461_-\|holin	phage holin, lambda family	Q8SBE1	Shigella_phage	3.9e-36	94.6
WP_000894640.1\|2405757_2407089_+	AAA family ATPase	R9TRQ8	Vibrio_phage	2.1e-19	28.5
WP_010989045.1\|2407117_2407486_-	antitermination protein Q	A5LH77	Enterobacteria_phage	7.4e-52	81.7
WP_001202279.1\|2407500_2408490_-	DUF968 domain-containing protein	A0A1C9IHZ5	Salmonella_phage	6.0e-189	97.3
WP_001115840.1\|2408818_2411185_-	SPI-2 type III secretion system effector E3 ubiquitin transferase SspH2	Q9MBL9	Phage_Gifsy-2	2.9e-72	88.7
WP_001113462.1\|2411353_2411557_-\|tail	tail protein	NA	NA	NA	NA
WP_000624225.1\|2411853_2412645_-\|tail	tail protein	Q1MVL8	Enterobacteria_phage	1.7e-48	31.6

DBSCAN-SWA_10

2813460 : 2839646

Salmonella_phage(68.97%)

holin,integrase,terminase

attL 2822570:2822584|attR 2841114:2841128

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001110972.1\|2813460_2814492_-	DUF2184 domain-containing protein	A0A0U2QQI2	Escherichia_phage	1.5e-73	45.5
WP_023181116.1\|2814509_2815382_-	hypothetical protein	NA	NA	NA	NA
WP_046891343.1\|2815402_2816977_-	NUDIX hydrolase	Q6UJ14	Burkholderia_virus	1.0e-20	48.6
WP_010835735.1\|2816977_2817853_-	hypothetical protein	A0A0U2I1R8	Escherichia_phage	1.2e-55	45.8
WP_046891344.1\|2817824_2819255_-	DUF1073 domain-containing protein	A0A0U2S5X9	Escherichia_phage	5.8e-92	37.9
WP_010835733.1\|2819254_2820526_-	hypothetical protein	A0A0U2JTW9	Escherichia_phage	5.1e-84	38.3
WP_046891345.1\|2820515_2821490_-\|terminase	terminase small subunit	C5IHM0	Burkholderia_virus	7.3e-30	37.7
WP_046891346.1\|2821549_2821954_-	hypothetical protein	NA	NA	NA	NA
WP_046891347.1\|2821943_2822495_-	DUF2514 domain-containing protein	NA	NA	NA	NA
WP_046891348.1\|2822491_2823118_-	glycoside hydrolase family 19 protein	Q858F0	Salmonella_phage	1.3e-93	80.2
2822570:2822584	attL	NA	NA	NA	NA
WP_046891349.1\|2823120_2823468_-\|holin	phage holin, lambda family	Q8SBE1	Shigella_phage	1.1e-44	78.5
WP_001749676.1\|2823866_2824664_-	antitermination protein	A0A0M4S661	Salmonella_phage	6.8e-151	99.2
WP_001617856.1\|2824653_2824800_-	YlcG family protein	A0A0M5M7B2	Salmonella_phage	4.3e-19	97.9
WP_046891350.1\|2824796_2825408_-	protein ninG	A0A0M4RU10	Salmonella_phage	1.2e-91	99.0
WP_046891351.1\|2825616_2826219_-	DUF1367 family protein	S4TTI0	Salmonella_phage	2.8e-109	99.0
WP_001217670.1\|2826553_2826793_-	DinI family protein	H6WRY5	Salmonella_phage	3.9e-38	100.0
WP_052753786.1\|2827312_2827870_-	DUF551 domain-containing protein	K7P7E4	Enterobacteria_phage	1.1e-38	50.5
WP_046891353.1\|2828227_2828701_-	class I SAM-dependent methyltransferase	H9C170	Pectobacterium_phage	4.3e-68	80.1
WP_046891354.1\|2828700_2829483_-	hypothetical protein	A0A1V0E5L5	Salmonella_phage	8.6e-66	92.8
WP_031607904.1\|2829479_2829881_-	ParB/RepB/Spo0J family partition protein	S4TTI6	Salmonella_phage	6.4e-73	99.2
WP_000788825.1\|2829925_2830627_-	hypothetical protein	A0A0M3ULE2	Salmonella_phage	8.4e-129	99.6
WP_000024046.1\|2830623_2831529_-	replication protein	A0A0M5M7Y1	Salmonella_phage	9.1e-176	99.7
WP_001574095.1\|2831620_2831995_-	hypothetical protein	S4TTD7	Salmonella_phage	3.9e-64	99.2
WP_000869364.1\|2831960_2832197_-	Cro/Cl family transcriptional regulator	H6WRX5	Salmonella_phage	1.8e-38	100.0
WP_001009038.1\|2832326_2832731_+	transcriptional regulator	H6WRX4	Salmonella_phage	4.2e-72	100.0
WP_000917563.1\|2833127_2833286_+	hypothetical protein	H6WRX3	Salmonella_phage	2.4e-23	100.0
WP_077941501.1\|2833307_2833658_+	DNA breaking-rejoining protein	S4TSN6	Salmonella_phage	1.6e-59	94.8
WP_046891356.1\|2833784_2836712_+	exodeoxyribonuclease	H6WRX1	Salmonella_phage	0.0e+00	98.6
WP_077941502.1\|2836674_2837832_+	recombinase RecT	S4TTE8	Salmonella_phage	1.0e-216	99.5
WP_001237031.1\|2837874_2838114_+	DUF4060 family protein	S4TR31	Salmonella_phage	2.0e-37	100.0
WP_001670787.1\|2838154_2838439_+	excisionase Xis	H6WRW8	Salmonella_phage	3.1e-42	86.2
WP_001007937.1\|2838416_2839646_-\|integrase	site-specific integrase	H6WRW7	Salmonella_phage	4.9e-233	94.1
2841114:2841128	attR	NA	NA	NA	NA

DBSCAN-SWA_11

4445784 : 4466204

Burkholderia_phage(45.0%)

tail,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000587738.1\|4445784_4446513_-	hypothetical protein	A0A077SLK3	Escherichia_phage	5.6e-35	37.3
WP_010989092.1\|4446709_4447000_-	membrane protein	NA	NA	NA	NA
WP_000084331.1\|4447248_4447704_-	hypothetical protein	NA	NA	NA	NA
WP_001526208.1\|4447700_4448306_-	DUF4376 domain-containing protein	NA	NA	NA	NA
WP_000368196.1\|4448310_4450056_-\|tail	tail protein	A0A0M3ULF6	Salmonella_phage	3.2e-52	52.2
WP_000359500.1\|4450058_4450691_-\|tail	phage tail protein I	Q6QI98	Burkholderia_phage	6.6e-24	56.4
WP_000951736.1\|4450683_4451799_-\|plate	baseplate protein	Q6QI99	Burkholderia_phage	1.8e-101	52.2
WP_001093501.1\|4451789_4452149_-\|plate	baseplate protein	Q6QIA0	Burkholderia_phage	2.8e-35	64.2
WP_001095011.1\|4452312_4453860_-	membrane protein	B9UDL6	Salmonella_phage	1.9e-48	29.9
WP_000703632.1\|4453859_4454789_-	glycosyltransferase family 2 protein	S5FKN0	Shigella_phage	8.8e-150	83.8
WP_000593182.1\|4454785_4455148_-	GtrA family protein	I1TED9	Salmonella_phage	1.2e-43	70.8
WP_000679398.1\|4455475_4456198_-\|plate	phage baseplate assembly protein V	A0A067ZIM2	Vibrio_phage	3.3e-11	41.0
WP_000818154.1\|4456207_4457251_-	phage late control D family protein	Q6QIA2	Burkholderia_phage	2.5e-76	45.1
WP_001269716.1\|4457238_4457448_-	membrane protein	A4JWL2	Burkholderia_virus	9.8e-17	60.3
WP_000271423.1\|4457447_4458401_-	methyl-accepting chemotaxis protein	A4JWL1	Burkholderia_virus	2.3e-36	50.8
WP_022630954.1\|4458400_4460755_-\|tail	phage tail tape measure protein	A4JWL0	Burkholderia_virus	1.2e-65	30.6
WP_001185654.1\|4460851_4460980_-\|tail	GpE family phage tail protein	NA	NA	NA	NA
WP_001003642.1\|4460939_4461257_-\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_000907494.1\|4461308_4461833_-\|tail	phage major tail tube protein	Q6QIA9	Burkholderia_phage	2.8e-68	69.5
WP_000729852.1\|4461832_4463260_-\|tail	phage tail sheath family protein	A4JWK5	Burkholderia_virus	1.1e-194	70.9
WP_000875314.1\|4463249_4463447_-	hypothetical protein	Q6QIB1	Burkholderia_phage	8.6e-07	52.9
WP_000449433.1\|4463443_4463899_-	hypothetical protein	NA	NA	NA	NA
WP_000777266.1\|4464058_4464373_-	membrane protein	Q6QIC4	Burkholderia_phage	6.4e-20	49.1
WP_001270441.1\|4464385_4464991_-	transglycosylase SLT domain-containing protein	Q5ZQZ1	Pseudomonas_phage	2.5e-60	59.9
WP_001226442.1\|4464993_4465281_-	membrane protein	Q6QIC8	Burkholderia_phage	2.3e-16	49.1
WP_000615248.1\|4465856_4466204_+	DNA-binding protein	Q6QIE8	Burkholderia_phage	4.9e-21	51.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP011430

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

167 : 82669

Escherichia_phage(94.85%)

tRNA,holin,integrase,tail,portal

attL 122:134|attR 20028:20040

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
122:134	attL	NA	NA	NA	NA
WP_001292231.1\|167_1196_+\|integrase	tyrosine-type recombinase/integrase	Q5QBN6	Enterobacteria_phage	8.7e-58	41.6
WP_000349257.1\|1305_1614_+	hypothetical protein	Q5QBE7	Escherichia_phage	1.4e-51	100.0
WP_001557738.1\|1610_2087_+	hypothetical protein	NA	NA	NA	NA
WP_001557737.1\|2083_2578_+	dUTP diphosphatase	A0A222YYP1	Escherichia_phage	3.4e-92	100.0
WP_001557736.1\|2592_3033_+	DUF2829 domain-containing protein	A0A222YXY1	Escherichia_phage	2.8e-82	100.0
WP_022630895.1\|3039_3816_+	hypothetical protein	A0A222YXM9	Escherichia_phage	1.6e-141	99.6
WP_000113017.1\|3848_4046_-	hypothetical protein	A0A222YWI9	Escherichia_phage	2.9e-26	100.0
WP_001216038.1\|4050_4431_-	type II toxin-antitoxin system death-on-curing family toxin	A0A222YZ88	Escherichia_phage	2.5e-63	100.0
WP_001190712.1\|4430_4652_-	type II toxin-antitoxin system Phd/YefM family antitoxin	A0A222YXU1	Escherichia_phage	6.7e-32	100.0
WP_000098854.1\|4760_5183_-	hypothetical protein	A0A222YWI5	Escherichia_phage	1.8e-70	100.0
WP_022630896.1\|5317_5707_-	DNA repair protein	A0A222YZE2	Escherichia_phage	2.4e-69	100.0
WP_001443773.1\|5718_5865_-	hypothetical protein	A0A222YXH0	Escherichia_phage	1.7e-20	100.0
WP_001344848.1\|6038_6248_+	hypothetical protein	A0A222YY00	Escherichia_phage	1.1e-31	98.6
WP_001142594.1\|7579_8035_-	DUF4014 family protein	A0A222YXP4	Escherichia_phage	8.8e-79	100.0
WP_001557731.1\|8036_8252_-	hypothetical protein	A0A222YWK2	Escherichia_phage	1.3e-37	100.0
WP_001557730.1\|8253_8445_-	hypothetical protein	A0A222YWL3	Escherichia_phage	4.6e-29	100.0
WP_000034256.1\|8431_9079_-	ead/Ea22-like family protein	A0A222YWN7	Escherichia_phage	2.9e-115	100.0
WP_046891370.1\|9065_9365_-	hypothetical protein	A0A222YY12	Escherichia_phage	1.3e-51	100.0
WP_046891371.1\|9378_10374_-	DUF968 domain-containing protein	A0A222YWL6	Escherichia_phage	1.9e-198	100.0
WP_000616788.1\|10472_11165_-	hypothetical protein	A0A222YWF0	Escherichia_phage	5.7e-138	100.0
WP_000022451.1\|11161_11473_-	hypothetical protein	A0A222YY67	Escherichia_phage	3.4e-58	97.1
WP_000139729.1\|11469_11694_-	hypothetical protein	A0A222YYR6	Escherichia_phage	5.5e-34	93.2
WP_001018053.1\|11656_11965_-	DUF4752 family protein	A0A222YWQ2	Escherichia_phage	3.4e-34	83.1
WP_000072161.1\|11961_12210_-	hypothetical protein	A0A1V0E5L1	Salmonella_phage	7.0e-30	86.1
WP_000834211.1\|12206_12695_-	hypothetical protein	A0A0P0ZFU9	Escherichia_phage	6.0e-41	64.8
WP_024133811.1\|12998_13595_-	DUF4406 domain-containing protein	A0A222YYT7	Escherichia_phage	1.1e-108	99.5
WP_022630898.1\|13882_14461_+	recombinase	A0A222YXV2	Escherichia_phage	2.5e-78	100.0
WP_071526433.1\|15134_15254_+	hypothetical protein	NA	NA	NA	NA
WP_022630900.1\|15272_15488_+	host cell division inhibitor Icd-like protein	A0A222YWG3	Escherichia_phage	7.4e-36	98.6
WP_022630901.1\|15487_16414_+	DNA-binding protein	A0A222YWG0	Escherichia_phage	5.7e-141	82.1
WP_022630902.1\|16473_16758_+	hypothetical protein	A0A222YY28	Escherichia_phage	1.4e-45	100.0
WP_000201621.1\|16903_17254_+	hypothetical protein	A0A222YZD3	Escherichia_phage	9.2e-60	100.0
WP_024144056.1\|17293_18205_-	hypothetical protein	A0A222YYN1	Escherichia_phage	2.2e-169	99.7
WP_001557715.1\|18472_19126_+	hypothetical protein	A0A222YZ79	Escherichia_phage	1.4e-114	99.1
WP_000542383.1\|19454_19784_+	hypothetical protein	A0A222YYR0	Escherichia_phage	3.6e-58	100.0
WP_022630904.1\|19776_20973_+	hypothetical protein	A0A222YXT1	Escherichia_phage	8.5e-198	96.5
20028:20040	attR	NA	NA	NA	NA
WP_022630906.1\|21805_22165_-	transcriptional regulator	A0A222YXG1	Escherichia_phage	2.9e-61	97.5
WP_000806445.1\|22221_22560_-	HigA family addiction module antidote protein	A0A222YWD7	Escherichia_phage	1.3e-55	100.0
WP_000162415.1\|22630_22933_-	hypothetical protein	A0A222YWE2	Escherichia_phage	5.9e-55	100.0
WP_001557712.1\|23095_23887_+	hypothetical protein	A0A222YXU3	Escherichia_phage	3.6e-152	100.0
WP_000203293.1\|23883_24651_+	hypothetical protein	A0A222YWF4	Escherichia_phage	4.4e-139	100.0
WP_000046500.1\|24654_25635_+	hypothetical protein	A0A222YXZ0	Escherichia_phage	2.5e-187	100.0
WP_000828868.1\|25631_26285_+	hypothetical protein	A0A222YWF1	Escherichia_phage	1.9e-103	100.0
WP_001258018.1\|26344_27250_+	recombination-associated protein RdgC	A0A222YY21	Escherichia_phage	2.2e-166	100.0
WP_000812238.1\|27233_27914_+	hypothetical protein	A0A222YXN3	Escherichia_phage	5.8e-135	100.0
WP_000045489.1\|27906_28812_+	Dam family site-specific DNA-(adenine-N6)-methyltransferase	A0A222YYM0	Escherichia_phage	1.0e-174	100.0
WP_001287145.1\|28860_30522_-\|tRNA	glutamine--tRNA ligase	A0A222YZ70	Escherichia_phage	0.0e+00	99.8
WP_000595051.1\|30790_31078_-	hypothetical protein	A0A222YZA7	Escherichia_phage	8.1e-46	100.0
WP_000585023.1\|31070_31712_-	AAA family ATPase	A0A222YXS3	Escherichia_phage	7.5e-116	100.0
WP_000076908.1\|31999_32338_-	plasmid stabilization protein	A0A222YWJ6	Escherichia_phage	2.3e-52	100.0
WP_022630907.1\|32350_33307_-	recombinase	A0A222YXF2	Escherichia_phage	2.9e-180	99.7
WP_001272820.1\|33573_33858_+	hypothetical protein	A0A222YXW1	Escherichia_phage	4.7e-38	100.0
WP_000887293.1\|33857_34664_+	hypothetical protein	A0A222YXK1	Escherichia_phage	7.7e-118	100.0
WP_000243176.1\|34734_35193_+	hypothetical protein	A0A222YWG1	Escherichia_phage	9.2e-68	99.3
WP_000020025.1\|35346_35805_-	hypothetical protein	A0A222YWJ4	Escherichia_phage	2.1e-88	100.0
WP_001427915.1\|35821_36127_-	hypothetical protein	A0A222YXX4	Escherichia_phage	3.4e-50	99.0
WP_001038834.1\|36372_38070_+	hypothetical protein	A0A222YWC7	Escherichia_phage	0.0e+00	100.0
WP_001396841.1\|38217_38496_+	hypothetical protein	A0A222YWH8	Escherichia_phage	3.1e-42	100.0
WP_001033848.1\|38563_40222_+\|tail	tail sheath protein	A0A222YWC8	Escherichia_phage	3.7e-311	99.8
WP_000801017.1\|40265_41000_+	hypothetical protein	A0A222YXT7	Escherichia_phage	5.9e-125	100.0
WP_001112722.1\|41067_41640_+	hypothetical protein	A0A222YY02	Escherichia_phage	6.0e-101	100.0
WP_000012433.1\|41648_42140_+	hypothetical protein	A0A222YWE4	Escherichia_phage	3.5e-89	100.0
WP_000187859.1\|42194_42746_+	hypothetical protein	A0A222YWE3	Escherichia_phage	1.6e-98	100.0
WP_000021878.1\|42761_43469_+	hypothetical protein	A0A222YY05	Escherichia_phage	1.0e-126	100.0
WP_001077897.1\|43850_44606_-	RepB family plasmid replication initiator protein	A0A222YYK1	Escherichia_phage	3.7e-138	100.0
WP_001025043.1\|44994_45816_+	hypothetical protein	A0A222YZ63	Escherichia_phage	7.7e-158	99.3
WP_022630908.1\|45830_49613_+	structural injection transglycosylase	A0A222YXR4	Escherichia_phage	0.0e+00	97.9
WP_000965099.1\|49618_49993_+	hypothetical protein	A0A222YXD0	Escherichia_phage	1.6e-65	99.2
WP_000156306.1\|49989_51420_+	hypothetical protein	A0A222YWB2	Escherichia_phage	2.9e-269	99.2
WP_000654652.1\|51430_52276_+	hypothetical protein	A0A222YWB7	Escherichia_phage	4.5e-161	100.0
WP_001396839.1\|52667_52817_+	hypothetical protein	A0A222YXS1	Escherichia_phage	7.9e-21	98.0
WP_046891372.1\|52819_54895_+	hypothetical protein	A0A222YWB9	Escherichia_phage	3.3e-205	77.1
WP_010835343.1\|54864_55482_+\|tail	tail fiber assembly protein	A0A1S6KZY8	Salmonella_phage	5.3e-95	83.6
WP_022631136.1\|55486_56020_-\|tail	tail fiber assembly protein	A0A1S6KZZ1	Salmonella_phage	5.7e-77	80.3
WP_077941505.1\|56022_56778_-\|tail	phage tail protein	A0A1C9II89	Salmonella_phage	7.0e-73	61.7
WP_000904917.1\|56762_57323_-	recombinase family protein	A0A222YWP5	Escherichia_phage	4.7e-98	98.9
WP_000457140.1\|57428_57755_+\|holin	holin	A0A222YZ46	Escherichia_phage	3.3e-51	100.0
WP_000526264.1\|57754_58201_+	hypothetical protein	A0A222YXP5	Escherichia_phage	9.2e-81	100.0
WP_000066531.1\|58190_58811_+	hypothetical protein	A0A222YXB2	Escherichia_phage	8.3e-80	99.0
WP_046891373.1\|58803_60789_+	hypothetical protein	A0A222YWA3	Escherichia_phage	1.4e-306	92.6
WP_000156172.1\|60788_61157_+	hypothetical protein	A0A222YWB0	Escherichia_phage	4.0e-37	84.7
WP_001043715.1\|61251_62616_+	hypothetical protein	A0A222YY44	Escherichia_phage	3.1e-244	98.5
WP_000094097.1\|62741_63299_+	DUF4145 domain-containing protein	A0A222YYQ2	Escherichia_phage	2.3e-97	99.5
WP_001244352.1\|63343_63676_+	hypothetical protein	A0A222YZ97	Escherichia_phage	2.6e-56	99.1
WP_143553143.1\|64165_65443_+\|portal	phage portal protein	A0A222YXQ7	Escherichia_phage	1.2e-245	99.8
WP_001557744.1\|65456_66455_+	hypothetical protein	A0A222YWA7	Escherichia_phage	1.4e-182	100.0
WP_022630891.1\|66655_67618_+	hypothetical protein	A0A222YXV1	Escherichia_phage	3.5e-178	100.0
WP_000245715.1\|68031_68256_+	host cell division inhibitor Icd-like protein	A0A222YWB3	Escherichia_phage	8.8e-40	100.0
WP_000350312.1\|68255_68963_+	DNA-binding protein	A0A222YXY0	Escherichia_phage	1.3e-129	99.1
WP_001548248.1\|68962_69160_+	hypothetical protein	A0A222YWF5	Escherichia_phage	7.0e-33	96.9
WP_001273800.1\|69191_69677_-	TIGR02594 family protein	A0A222YWL8	Escherichia_phage	3.3e-92	100.0
WP_022630892.1\|69828_76665_+	DEAD/DEAH box helicase family protein	A0A222YYH3	Escherichia_phage	0.0e+00	99.0
WP_000209223.1\|76701_77136_+	hypothetical protein	A0A222YZ35	Escherichia_phage	2.9e-79	100.0
WP_001230915.1\|77138_77399_+	hypothetical protein	A0A222YXI8	Escherichia_phage	1.8e-44	100.0
WP_099145002.1\|77652_78030_+	VRR-NUC domain-containing protein	A0A222YXP1	Escherichia_phage	1.1e-69	99.2
WP_046891376.1\|78259_78541_+	hypothetical protein	A0A222YW96	Escherichia_phage	6.9e-42	98.9
WP_000077921.1\|78654_79863_+	hypothetical protein	A0A222YW83	Escherichia_phage	2.9e-230	99.0
WP_000467090.1\|82070_82505_+	tellurite resistance TerB family protein	A0A222YXQ0	Escherichia_phage	3.7e-74	100.0
WP_000579539.1\|82504_82669_+	DUF3927 family protein	A0A222YXW5	Escherichia_phage	1.8e-18	100.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP011429

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP011428

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP011430

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection