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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP007560 Streptococcus pyogenes strain NGAS743, complete genome 1 crisprs DinG,csm6,cas3,DEDDh,csa3 0 0 117 0

Results visualization

1. NZ_CP007560
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP007560_1 766163-766263 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 2882 2 Rhizobium_phage(100.0%) NA NA
DBSCAN-SWA_2 10953 : 14788 3 Phaeocystis_globosa_virus(50.0%) tRNA NA
DBSCAN-SWA_3 29806 : 58016 24 Streptococcus_phage(21.43%) NA NA
DBSCAN-SWA_4 61218 : 62235 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_5 88093 : 101317 7 Bacillus_virus(25.0%) tRNA NA
DBSCAN-SWA_6 108426 : 113466 8 Streptococcus_phage(66.67%) tRNA NA
DBSCAN-SWA_7 148926 : 154180 4 Streptococcus_phage(50.0%) NA NA
DBSCAN-SWA_8 160873 : 164726 2 Pandoravirus(50.0%) tRNA NA
DBSCAN-SWA_9 173568 : 182976 8 Bacillus_virus(25.0%) NA NA
DBSCAN-SWA_10 187239 : 190892 3 Bacillus_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_11 202790 : 210413 7 Bacillus_phage(75.0%) NA NA
DBSCAN-SWA_12 213563 : 215009 1 Tupanvirus(100.0%) tRNA NA
DBSCAN-SWA_13 237844 : 238684 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_14 242774 : 247435 4 Streptococcus_phage(50.0%) NA NA
DBSCAN-SWA_15 254228 : 260823 6 Brazilian_cedratvirus(33.33%) NA NA
DBSCAN-SWA_16 267026 : 269013 2 Bacillus_virus(50.0%) NA NA
DBSCAN-SWA_17 279839 : 280472 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_18 287252 : 288317 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_19 294943 : 307121 10 Bacillus_phage(40.0%) protease NA
DBSCAN-SWA_20 322422 : 334701 14 Staphylococcus_phage(50.0%) tRNA NA
DBSCAN-SWA_21 339134 : 443270 110 Streptococcus_phage(21.88%) transposase,tRNA,bacteriocin,protease NA
DBSCAN-SWA_22 449109 : 453089 4 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_23 465323 : 474381 12 Streptococcus_phage(50.0%) transposase,portal NA
DBSCAN-SWA_24 493597 : 497174 3 Phage_TP(33.33%) tRNA NA
DBSCAN-SWA_25 500723 : 505087 5 Bacillus_phage(33.33%) NA NA
DBSCAN-SWA_26 509841 : 511038 1 Hokovirus(100.0%) NA NA
DBSCAN-SWA_27 515848 : 520529 3 uncultured_Mediterranean_phage(50.0%) NA NA
DBSCAN-SWA_28 528294 : 532372 5 Trichoplusia_ni_ascovirus(50.0%) NA NA
DBSCAN-SWA_29 535378 : 588733 67 Streptococcus_phage(64.29%) holin,tRNA,terminase,portal NA
DBSCAN-SWA_30 597046 : 609470 10 Streptococcus_phage(33.33%) tRNA NA
DBSCAN-SWA_31 619503 : 624334 3 Mycobacterium_phage(50.0%) tRNA NA
DBSCAN-SWA_32 629013 : 632574 3 Enterococcus_phage(100.0%) NA NA
DBSCAN-SWA_33 638060 : 643387 6 Diachasmimorpha_longicaudata_entomopoxvirus(33.33%) protease NA
DBSCAN-SWA_34 647711 : 648908 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_35 659104 : 661426 2 Streptococcus_phi-m46.1-like_phage(100.0%) NA NA
DBSCAN-SWA_36 666474 : 667706 1 Bacillus_phage(100.0%) transposase NA
DBSCAN-SWA_37 679606 : 680347 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_38 685123 : 686662 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_39 704440 : 762706 73 Streptococcus_phage(41.07%) terminase,integrase,portal,tail,holin,head attL 710468:710527|attR 756289:756384
DBSCAN-SWA_40 766314 : 770047 4 Paramecium_bursaria_Chlorella_virus(50.0%) NA NA
DBSCAN-SWA_41 775617 : 782994 10 Bacillus_phage(33.33%) NA NA
DBSCAN-SWA_42 789765 : 815082 25 Bacillus_virus(27.27%) NA NA
DBSCAN-SWA_43 819356 : 822109 3 Tupanvirus(50.0%) NA NA
DBSCAN-SWA_44 826716 : 834346 6 Streptococcus_phage(33.33%) NA NA
DBSCAN-SWA_45 838868 : 841107 2 Streptococcus_phage(50.0%) NA NA
DBSCAN-SWA_46 860461 : 866920 6 Cafeteria_roenbergensis_virus(50.0%) NA NA
DBSCAN-SWA_47 872394 : 905840 32 Bacillus_phage(12.5%) NA NA
DBSCAN-SWA_48 912933 : 927735 15 Dickeya_phage(16.67%) NA NA
DBSCAN-SWA_49 931493 : 932183 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_50 936401 : 940629 4 Indivirus(50.0%) NA NA
DBSCAN-SWA_51 953937 : 955587 1 Enterobacteria_phage(100.0%) NA NA
DBSCAN-SWA_52 961678 : 963511 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_53 974208 : 975198 1 Bodo_saltans_virus(100.0%) NA NA
DBSCAN-SWA_54 978520 : 980284 1 Erysipelothrix_phage(100.0%) NA NA
DBSCAN-SWA_55 984509 : 986417 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_56 989601 : 990360 1 Indivirus(100.0%) NA NA
DBSCAN-SWA_57 994248 : 995901 1 Only_Syngen_Nebraska_virus(100.0%) NA NA
DBSCAN-SWA_58 999132 : 1001879 3 Escherichia_phage(66.67%) NA NA
DBSCAN-SWA_59 1005271 : 1008914 3 Temperate_phage(33.33%) NA NA
DBSCAN-SWA_60 1020785 : 1028172 5 Bacillus_virus(66.67%) NA NA
DBSCAN-SWA_61 1037093 : 1047317 11 Bacillus_phage(33.33%) protease NA
DBSCAN-SWA_62 1055515 : 1063519 7 Bacillus_phage(25.0%) tRNA NA
DBSCAN-SWA_63 1066931 : 1077624 10 Temperate_phage(20.0%) NA NA
DBSCAN-SWA_64 1089036 : 1089723 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_65 1094645 : 1117381 24 Streptococcus_phage(30.77%) tRNA,protease NA
DBSCAN-SWA_66 1123890 : 1124586 1 Sulfolobus_monocaudavirus(100.0%) NA NA
DBSCAN-SWA_67 1130009 : 1144235 12 Staphylococcus_phage(20.0%) NA NA
DBSCAN-SWA_68 1147597 : 1315353 183 Streptococcus_phage(40.17%) capsid,terminase,integrase,portal,tail,tRNA,bacteriocin,protease,transposase,holin,head attL 1212270:1212285|attR 1294687:1294702
DBSCAN-SWA_69 1326022 : 1327864 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_70 1333380 : 1337931 5 Enterobacteria_phage(33.33%) NA NA
DBSCAN-SWA_71 1348654 : 1351125 2 Enterobacteria_phage(50.0%) NA NA
DBSCAN-SWA_72 1357917 : 1360566 1 Catovirus(100.0%) tRNA NA
DBSCAN-SWA_73 1365015 : 1366089 1 Ostreococcus_lucimarinus_virus(100.0%) NA NA
DBSCAN-SWA_74 1374148 : 1375873 1 Enterobacteria_phage(100.0%) NA NA
DBSCAN-SWA_75 1392381 : 1393737 1 Erysipelothrix_phage(100.0%) NA NA
DBSCAN-SWA_76 1404278 : 1422784 17 Streptococcus_phage(37.5%) tRNA NA
DBSCAN-SWA_77 1432542 : 1445686 11 Bacillus_virus(42.86%) NA NA
DBSCAN-SWA_78 1450924 : 1458761 7 Streptococcus_phage(50.0%) bacteriocin NA
DBSCAN-SWA_79 1461830 : 1462532 1 Paramecium_bursaria_Chlorella_virus(100.0%) NA NA
DBSCAN-SWA_80 1471573 : 1478177 6 Streptococcus_phage(50.0%) NA NA
DBSCAN-SWA_81 1481856 : 1493517 12 Synechococcus_phage(25.0%) NA NA
DBSCAN-SWA_82 1498797 : 1499523 1 Anomala_cuprea_entomopoxvirus(100.0%) NA NA
DBSCAN-SWA_83 1502886 : 1504347 1 Moraxella_phage(100.0%) NA NA
DBSCAN-SWA_84 1509457 : 1510735 1 uncultured_Mediterranean_phage(100.0%) tRNA NA
DBSCAN-SWA_85 1516173 : 1516908 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_86 1521811 : 1525055 2 Cafeteria_roenbergensis_virus(50.0%) NA NA
DBSCAN-SWA_87 1534249 : 1534804 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_88 1537970 : 1552983 12 Organic_Lake_phycodnavirus(28.57%) NA NA
DBSCAN-SWA_89 1559239 : 1561956 2 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_90 1575412 : 1601065 26 Bacillus_phage(20.0%) NA NA
DBSCAN-SWA_91 1605786 : 1606734 1 Acanthocystis_turfacea_Chlorella_virus(100.0%) NA NA
DBSCAN-SWA_92 1611541 : 1616277 7 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_93 1620732 : 1625074 5 Moraxella_phage(50.0%) tRNA NA
DBSCAN-SWA_94 1630410 : 1631301 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_95 1636609 : 1638214 1 Only_Syngen_Nebraska_virus(100.0%) NA NA
DBSCAN-SWA_96 1652257 : 1658029 3 Staphylococcus_phage(66.67%) NA NA
DBSCAN-SWA_97 1662682 : 1663950 2 Planktothrix_phage(50.0%) NA NA
DBSCAN-SWA_98 1673220 : 1677806 8 Escherichia_phage(33.33%) integrase attL 1674515:1674529|attR 1676423:1676437
DBSCAN-SWA_99 1682307 : 1683651 1 Catovirus(100.0%) tRNA NA
DBSCAN-SWA_100 1688134 : 1688866 1 Synechococcus_phage(100.0%) NA NA
DBSCAN-SWA_101 1694124 : 1705577 8 Synechococcus_phage(25.0%) tRNA,protease NA
DBSCAN-SWA_102 1712202 : 1713336 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_103 1716699 : 1718919 1 Vibrio_phage(100.0%) NA NA
DBSCAN-SWA_104 1722596 : 1733690 10 Vibrio_phage(16.67%) NA NA
DBSCAN-SWA_105 1737978 : 1739674 3 Anomala_cuprea_entomopoxvirus(33.33%) NA NA
DBSCAN-SWA_106 1756162 : 1761926 5 Staphylococcus_phage(25.0%) NA NA
DBSCAN-SWA_107 1775507 : 1781520 5 Streptococcus_phage(33.33%) NA NA
DBSCAN-SWA_108 1785856 : 1786630 1 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_109 1790771 : 1791590 1 Bodo_saltans_virus(100.0%) NA NA
DBSCAN-SWA_110 1796303 : 1806167 9 uncultured_virus(25.0%) transposase,protease NA
DBSCAN-SWA_111 1815317 : 1816859 1 Catovirus(100.0%) NA NA
DBSCAN-SWA_112 1824872 : 1826768 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_113 1833302 : 1838830 5 Enterococcus_phage(66.67%) NA NA
DBSCAN-SWA_114 1844260 : 1865006 19 Streptococcus_phage(22.22%) tRNA,bacteriocin NA
DBSCAN-SWA_115 1877064 : 1878432 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_116 1887478 : 1907873 18 Streptococcus_phage(20.0%) tRNA NA
DBSCAN-SWA_117 1911402 : 1914691 3 Staphylococcus_prophage(50.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage