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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP011546 Corynebacterium uterequi strain DSM 45634 chromosome, complete genome 8 crisprs cas3,DEDDh,WYL,cas4,csa3,cas2,cas6e,cas5,cas7,cse2gr11,cas8e,DinG 0 29 1 0

Results visualization

1. NZ_CP011546
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011546_1 687384-687529 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011546_2 792622-792785 Unclear NA
2 spacers
cas3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011546_3 1839144-1842017 TypeI-E NA:I-E
47 spacers
DEDDh,cas2,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011546_4 1843537-1844724 TypeI-E I-E
19 spacers
DEDDh,cas2,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011546_5 1875301-1875551 Orphan NA
3 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011546_6 2157541-2157644 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011546_7 2223433-2223542 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011546_8 2380242-2380716 Orphan NA
6 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP011546_3 3.112|1840313|35|NZ_CP011546|PILER-CR 1840313-1840347 35 NZ_LR134460 Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 18, complete sequence 20510-20544 3 0.914
NZ_CP011546_3 3.20|1840315|33|NZ_CP011546|CRISPRCasFinder 1840315-1840347 33 NZ_LR134460 Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 18, complete sequence 20510-20542 4 0.879
NZ_CP011546_3 3.20|1840315|33|NZ_CP011546|CRISPRCasFinder 1840315-1840347 33 LN997843 Streptomyces reticuli genome assembly TUE45, plasmid : II 645148-645180 6 0.818
NZ_CP011546_3 3.47|1841957|33|NZ_CP011546|CRISPRCasFinder 1841957-1841989 33 JN871591 Salmonella phage SPN19, complete genome 8373-8405 6 0.818
NZ_CP011546_3 3.47|1841957|33|NZ_CP011546|CRISPRCasFinder 1841957-1841989 33 KX452700 UNVERIFIED: Enterobacter phage KPN7 genomic sequence 12430-12462 6 0.818
NZ_CP011546_3 3.47|1841957|33|NZ_CP011546|CRISPRCasFinder 1841957-1841989 33 KR296691 Salmonella phage 37, complete genome 51540-51572 6 0.818
NZ_CP011546_3 3.47|1841957|33|NZ_CP011546|CRISPRCasFinder 1841957-1841989 33 MK286578 Salmonella phage Season12, complete genome 50924-50956 6 0.818
NZ_CP011546_3 3.47|1841957|33|NZ_CP011546|CRISPRCasFinder 1841957-1841989 33 KR296689 Salmonella phage 35, complete genome 46978-47010 6 0.818
NZ_CP011546_3 3.47|1841957|33|NZ_CP011546|CRISPRCasFinder 1841957-1841989 33 NC_048727 Salmonella phage Siskin, complete genome 50211-50243 6 0.818
NZ_CP011546_3 3.47|1841957|33|NZ_CP011546|CRISPRCasFinder 1841957-1841989 33 KX452699 UNVERIFIED: Salmonella phage KPN6 genomic sequence 50488-50520 6 0.818
NZ_CP011546_3 3.8|1839585|33|NZ_CP011546|CRISPRCasFinder 1839585-1839617 33 NC_008697 Nocardioides sp. JS614 plasmid pNOCA01, complete sequence 255734-255766 7 0.788
NZ_CP011546_3 3.8|1839585|33|NZ_CP011546|CRISPRCasFinder 1839585-1839617 33 NZ_AP014705 Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence 65294-65326 7 0.788
NZ_CP011546_3 3.9|1839646|33|NZ_CP011546|CRISPRCasFinder 1839646-1839678 33 MK501729 Gordonia phage Walrus, complete genome 51956-51988 7 0.788
NZ_CP011546_3 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder 1839768-1839799 32 MN234223 Mycobacterium phage Philly, complete genome 46181-46212 7 0.781
NZ_CP011546_3 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder 1839768-1839799 32 KP027207 Mycobacterium phage Chandler, complete genome 47110-47141 7 0.781
NZ_CP011546_3 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder 1839768-1839799 32 MN096360 Mycobacterium phage Rita1961, complete genome 46776-46807 7 0.781
NZ_CP011546_3 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder 1839768-1839799 32 MG839014 Mycobacterium phage RagingRooster, complete genome 46015-46046 7 0.781
NZ_CP011546_3 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder 1839768-1839799 32 KJ194581 Mycobacterium phage Audrey, complete genome 46326-46357 7 0.781
NZ_CP011546_3 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder 1839768-1839799 32 KR080203 Mycobacterium phage OrangeOswald, complete genome 46330-46361 7 0.781
NZ_CP011546_3 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder 1839768-1839799 32 MH513976 Mycobacterium phage Morty007, complete genome 47264-47295 7 0.781
NZ_CP011546_3 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder 1839768-1839799 32 MH051265 Mycobacterium phage Yahalom, complete genome 46342-46373 7 0.781
NZ_CP011546_3 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder 1839768-1839799 32 MH316565 Mycobacterium phage Mortcellus, complete genome 47427-47458 7 0.781
NZ_CP011546_3 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder 1839768-1839799 32 MT310871 Mycobacterium phage Jackstina, complete genome 46251-46282 7 0.781
NZ_CP011546_3 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder 1839768-1839799 32 MK359357 Mycobacterium phage RomaT, complete genome 46924-46955 7 0.781
NZ_CP011546_3 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder 1839768-1839799 32 JF704095 Mycobacterium phage Daisy, complete sequence 46355-46386 7 0.781
NZ_CP011546_3 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder 1839768-1839799 32 EU816589 Mycobacterium phage Phaedrus, complete genome 46253-46284 7 0.781
NZ_CP011546_3 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder 1839768-1839799 32 MN096359 Mycobacterium phage Obutu, complete genome 46775-46806 7 0.781
NZ_CP011546_3 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder 1839768-1839799 32 MK061414 Mycobacterium phage Marley1013, complete genome 47264-47295 7 0.781
NZ_CP011546_3 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder 1839768-1839799 32 MT952851 Mycobacterium phage Gervas, complete genome 46770-46801 7 0.781
NZ_CP011546_3 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder 1839768-1839799 32 MK059749 Mycobacterium phage CRB2, complete genome 69044-69075 7 0.781
NZ_CP011546_3 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder 1839768-1839799 32 MG925353 Mycobacterium phage Nozo, complete genome 47089-47120 7 0.781
NZ_CP011546_3 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder 1839768-1839799 32 KJ194584 Mycobacterium phage Heathcliff, complete genome 46292-46323 7 0.781
NZ_CP011546_3 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder 1839768-1839799 32 MN444872 Mycobacterium phage SynergyX, complete genome 46331-46362 7 0.781
NZ_CP011546_3 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder 1839768-1839799 32 MH576977 Mycobacterium phage Tydolla, complete genome 47065-47096 7 0.781
NZ_CP011546_3 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder 1839768-1839799 32 MG925338 Mycobacterium phage ChaChing, complete genome 46343-46374 7 0.781
NZ_CP011546_3 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder 1839768-1839799 32 NC_023742 Mycobacterium phage Akoma, complete genome 46331-46362 7 0.781
NZ_CP011546_3 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder 1839768-1839799 32 MG920059 Mycobacterium phage Baloo, complete genome 46329-46360 7 0.781
NZ_CP011546_3 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder 1839768-1839799 32 NC_023686 Mycobacterium phage Gadjet, complete genome 46658-46689 7 0.781
NZ_CP011546_3 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder 1839768-1839799 32 KR080205 Mycobacterium phage Corofin, complete genome 46353-46384 7 0.781
NZ_CP011546_3 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder 1839768-1839799 32 NC_041965 Mycobacterium phage Athena, complete genome 47078-47109 7 0.781
NZ_CP011546_3 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder 1839768-1839799 32 DQ398049 Mycobacterium phage Pipefish, complete genome 47601-47632 7 0.781
NZ_CP011546_3 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder 1839768-1839799 32 KF493879 Mycobacterium phage Bernardo, complete genome 46757-46788 7 0.781
NZ_CP011546_3 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder 1839768-1839799 32 MT310892 Mycobacterium phage Compostia, complete genome 46758-46789 7 0.781
NZ_CP011546_3 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder 1839768-1839799 32 JN699018 Mycobacterium phage Kamiyu, complete genome 46299-46330 7 0.781
NZ_CP011546_3 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder 1839768-1839799 32 NC_012027 Mycobacterium phage Phlyer, complete genome 47070-47101 7 0.781
NZ_CP011546_3 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder 1839768-1839799 32 MN444873 Mycobacterium phage Abinghost, complete genome 46320-46351 7 0.781
NZ_CP011546_3 3.14|1839949|33|NZ_CP011546|CRISPRCasFinder 1839949-1839981 33 NC_012852 Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132504, complete sequence 321636-321668 7 0.788
NZ_CP011546_3 3.14|1839949|33|NZ_CP011546|CRISPRCasFinder 1839949-1839981 33 NZ_CP018233 Rhizobium leguminosarum strain Vaf-108 plasmid unnamed5, complete sequence 214593-214625 7 0.788
NZ_CP011546_3 3.15|1840010|33|NZ_CP011546|CRISPRCasFinder 1840010-1840042 33 NZ_CP021029 Rhizobium sp. TAL182 plasmid pRetTAL182e, complete sequence 366644-366676 7 0.788
NZ_CP011546_3 3.15|1840010|33|NZ_CP011546|CRISPRCasFinder 1840010-1840042 33 NZ_CP013515 Rhizobium sp. N1314 plasmid pRspN1314d, complete sequence 361995-362027 7 0.788
NZ_CP011546_3 3.15|1840010|33|NZ_CP011546|CRISPRCasFinder 1840010-1840042 33 AP014720 Arthrobacter sp. Hiyo8 plasmid pHiyo8-1 DNA, complete genome, strain: Hiyo8 165268-165300 7 0.788
NZ_CP011546_3 3.15|1840010|33|NZ_CP011546|CRISPRCasFinder 1840010-1840042 33 NZ_CP013605 Rhizobium sp. N731 plasmid pRspN731d, complete sequence 361989-362021 7 0.788
NZ_CP011546_3 3.24|1840558|32|NZ_CP011546|CRISPRCasFinder 1840558-1840589 32 NZ_CP053657 Bacillus cereus strain CTMA_1571 plasmid p.1, complete sequence 132330-132361 7 0.781
NZ_CP011546_3 3.32|1841045|32|NZ_CP011546|CRISPRCasFinder 1841045-1841076 32 NZ_CP034999 Rhizobium acidisoli strain FH23 plasmid pRapFH23a, complete sequence 667095-667126 7 0.781
NZ_CP011546_3 3.67|1840309|39|NZ_CP011546|CRT 1840309-1840347 39 NZ_LR134460 Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 18, complete sequence 20510-20548 7 0.821
NZ_CP011546_3 3.139|1841955|35|NZ_CP011546|PILER-CR 1841955-1841989 35 JN871591 Salmonella phage SPN19, complete genome 8371-8405 7 0.8
NZ_CP011546_3 3.139|1841955|35|NZ_CP011546|PILER-CR 1841955-1841989 35 KX452700 UNVERIFIED: Enterobacter phage KPN7 genomic sequence 12430-12464 7 0.8
NZ_CP011546_3 3.139|1841955|35|NZ_CP011546|PILER-CR 1841955-1841989 35 KR296691 Salmonella phage 37, complete genome 51540-51574 7 0.8
NZ_CP011546_3 3.139|1841955|35|NZ_CP011546|PILER-CR 1841955-1841989 35 MK286578 Salmonella phage Season12, complete genome 50924-50958 7 0.8
NZ_CP011546_3 3.139|1841955|35|NZ_CP011546|PILER-CR 1841955-1841989 35 KR296689 Salmonella phage 35, complete genome 46978-47012 7 0.8
NZ_CP011546_3 3.139|1841955|35|NZ_CP011546|PILER-CR 1841955-1841989 35 NC_048727 Salmonella phage Siskin, complete genome 50211-50245 7 0.8
NZ_CP011546_3 3.139|1841955|35|NZ_CP011546|PILER-CR 1841955-1841989 35 KX452699 UNVERIFIED: Salmonella phage KPN6 genomic sequence 50488-50522 7 0.8
NZ_CP011546_4 4.6|1843870|33|NZ_CP011546|PILER-CR,CRISPRCasFinder,CRT 1843870-1843902 33 MN586029 Mycobacterium phage Hannaconda, complete genome 83755-83787 7 0.788
NZ_CP011546_4 4.6|1843870|33|NZ_CP011546|PILER-CR,CRISPRCasFinder,CRT 1843870-1843902 33 MK524516 Mycobacterium phage Bobby, complete genome 85285-85317 7 0.788
NZ_CP011546_4 4.6|1843870|33|NZ_CP011546|PILER-CR,CRISPRCasFinder,CRT 1843870-1843902 33 MN062701 Mycobacterium phage Dallas, complete genome 84159-84191 7 0.788
NZ_CP011546_4 4.6|1843870|33|NZ_CP011546|PILER-CR,CRISPRCasFinder,CRT 1843870-1843902 33 MK524529 Mycobacterium phage Phoebus, complete genome 86480-86512 7 0.788
NZ_CP011546_3 3.8|1839585|33|NZ_CP011546|CRISPRCasFinder 1839585-1839617 33 NZ_CP012399 Chelatococcus sp. CO-6 plasmid pCO-6, complete sequence 638462-638494 8 0.758
NZ_CP011546_3 3.9|1839646|33|NZ_CP011546|CRISPRCasFinder 1839646-1839678 33 MN586031 Gordonia phage Gambino, complete genome 53554-53586 8 0.758
NZ_CP011546_3 3.9|1839646|33|NZ_CP011546|CRISPRCasFinder 1839646-1839678 33 KU998236 Gordonia phage Blueberry, complete genome 54922-54954 8 0.758
NZ_CP011546_3 3.9|1839646|33|NZ_CP011546|CRISPRCasFinder 1839646-1839678 33 MT723935 Gordonia phage Azula, complete genome 53554-53586 8 0.758
NZ_CP011546_3 3.9|1839646|33|NZ_CP011546|CRISPRCasFinder 1839646-1839678 33 MH536818 Gordonia phage Frokostdame, complete genome 52463-52495 8 0.758
NZ_CP011546_3 3.9|1839646|33|NZ_CP011546|CRISPRCasFinder 1839646-1839678 33 KX557275 Gordonia phage CarolAnn, complete genome 54098-54130 8 0.758
NZ_CP011546_3 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder 1839768-1839799 32 NZ_CP027859 Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence 1156927-1156958 8 0.75
NZ_CP011546_3 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder 1839768-1839799 32 NZ_CP032054 Streptomyces clavuligerus strain F1D-5 plasmid pSCL1, complete sequence 292793-292824 8 0.75
NZ_CP011546_3 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder 1839768-1839799 32 NZ_CP032054 Streptomyces clavuligerus strain F1D-5 plasmid pSCL1, complete sequence 758656-758687 8 0.75
NZ_CP011546_3 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder 1839768-1839799 32 NZ_CP016560 Streptomyces clavuligerus strain F613-1 plasmid pSCL4, complete sequence 415913-415944 8 0.75
NZ_CP011546_3 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder 1839768-1839799 32 NZ_CP021083 Deinococcus ficus strain CC-FR2-10 plasmid pDFI2, complete sequence 27754-27785 8 0.75
NZ_CP011546_3 3.13|1839889|32|NZ_CP011546|CRISPRCasFinder 1839889-1839920 32 NZ_CP030354 Novosphingobium sp. P6W plasmid pP6W1, complete sequence 469134-469165 8 0.75
NZ_CP011546_3 3.15|1840010|33|NZ_CP011546|CRISPRCasFinder 1840010-1840042 33 NZ_CP020952 Rhizobium sp. CIAT894 plasmid pRheCIAT894e, complete sequence 521945-521977 8 0.758
NZ_CP011546_3 3.20|1840315|33|NZ_CP011546|CRISPRCasFinder 1840315-1840347 33 NC_016113 Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence 1192175-1192207 8 0.758
NZ_CP011546_3 3.20|1840315|33|NZ_CP011546|CRISPRCasFinder 1840315-1840347 33 NZ_CP030864 Streptomyces globosus strain LZH-48 plasmid unnamed2, complete sequence 111245-111277 8 0.758
NZ_CP011546_3 3.20|1840315|33|NZ_CP011546|CRISPRCasFinder 1840315-1840347 33 NC_017585 Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence 621357-621389 8 0.758
NZ_CP011546_3 3.43|1841713|33|NZ_CP011546|CRISPRCasFinder 1841713-1841745 33 NZ_CP046333 Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3 504245-504277 8 0.758
NZ_CP011546_3 3.43|1841713|33|NZ_CP011546|CRISPRCasFinder 1841713-1841745 33 NC_007974 Cupriavidus metallidurans CH34 megaplasmid, complete sequence 542974-543006 8 0.758
NZ_CP011546_3 3.103|1839766|34|NZ_CP011546|PILER-CR 1839766-1839799 34 NZ_CP032054 Streptomyces clavuligerus strain F1D-5 plasmid pSCL1, complete sequence 292791-292824 8 0.765
NZ_CP011546_3 3.103|1839766|34|NZ_CP011546|PILER-CR 1839766-1839799 34 NZ_CP032054 Streptomyces clavuligerus strain F1D-5 plasmid pSCL1, complete sequence 758656-758689 8 0.765
NZ_CP011546_3 3.103|1839766|34|NZ_CP011546|PILER-CR 1839766-1839799 34 NZ_CP027859 Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence 1156927-1156960 8 0.765
NZ_CP011546_3 3.103|1839766|34|NZ_CP011546|PILER-CR 1839766-1839799 34 NZ_CP016560 Streptomyces clavuligerus strain F613-1 plasmid pSCL4, complete sequence 415913-415946 8 0.765
NZ_CP011546_3 3.103|1839766|34|NZ_CP011546|PILER-CR 1839766-1839799 34 NZ_CP021083 Deinococcus ficus strain CC-FR2-10 plasmid pDFI2, complete sequence 27754-27787 8 0.765
NZ_CP011546_4 4.6|1843870|33|NZ_CP011546|PILER-CR,CRISPRCasFinder,CRT 1843870-1843902 33 NZ_CP007070 Rhizobium leguminosarum bv. trifolii CB782 plasmid unnamed, complete sequence 137608-137640 8 0.758
NZ_CP011546_4 4.8|1843992|33|NZ_CP011546|PILER-CR,CRISPRCasFinder,CRT 1843992-1844024 33 JF501022 Klebsiella phage KP36, complete genome 13319-13351 8 0.758
NZ_CP011546_4 4.8|1843992|33|NZ_CP011546|PILER-CR,CRISPRCasFinder,CRT 1843992-1844024 33 NC_016592 Burkholderia sp. YI23 plasmid byi_3p, complete sequence 68091-68123 8 0.758
NZ_CP011546_4 4.15|1844419|33|NZ_CP011546|PILER-CR,CRISPRCasFinder,CRT 1844419-1844451 33 NC_013283 Cronobacter turicensis z3032 plasmid pCTU1, complete sequence 100275-100307 8 0.758
NZ_CP011546_4 4.17|1844541|33|NZ_CP011546|PILER-CR,CRISPRCasFinder,CRT 1844541-1844573 33 NZ_CP030763 Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed3, complete sequence 347480-347512 8 0.758
NZ_CP011546_3 3.8|1839585|33|NZ_CP011546|CRISPRCasFinder 1839585-1839617 33 AGJI02000011 Saccharomonospora glauca K62 plasmid pSACGL01, complete sequence, whole genome shotgun sequence 21916-21948 9 0.727
NZ_CP011546_3 3.10|1839707|33|NZ_CP011546|CRISPRCasFinder 1839707-1839739 33 NC_015851 Acidithiobacillus caldus SM-1 megaplasmid, complete sequence 154733-154765 9 0.727
NZ_CP011546_3 3.10|1839707|33|NZ_CP011546|CRISPRCasFinder 1839707-1839739 33 NZ_CP026329 Acidithiobacillus caldus strain MTH-04 plasmid p1, complete sequence 109777-109809 9 0.727
NZ_CP011546_3 3.14|1839949|33|NZ_CP011546|CRISPRCasFinder 1839949-1839981 33 NZ_KX443401 Rhodococcus hoagii strain PAM1572 plasmid pVAPN1572, complete sequence 7282-7314 9 0.727
NZ_CP011546_3 3.14|1839949|33|NZ_CP011546|CRISPRCasFinder 1839949-1839981 33 NZ_KX443399 Rhodococcus hoagii strain PAM1354 plasmid pVAPA1354, complete sequence 10895-10927 9 0.727
NZ_CP011546_3 3.14|1839949|33|NZ_CP011546|CRISPRCasFinder 1839949-1839981 33 NZ_KX443400 Rhodococcus hoagii strain PAM1557 plasmid pVAPN1557, complete sequence 10841-10873 9 0.727
NZ_CP011546_3 3.14|1839949|33|NZ_CP011546|CRISPRCasFinder 1839949-1839981 33 NZ_KX443398 Rhodococcus hoagii strain PAM1204 plasmid pVAPN1204, complete sequence 10790-10822 9 0.727
NZ_CP011546_3 3.14|1839949|33|NZ_CP011546|CRISPRCasFinder 1839949-1839981 33 NZ_KP851975 Rhodococcus hoagii strain PAM2012 plasmid pVAPN2012, complete sequence 10842-10874 9 0.727
NZ_CP011546_3 3.14|1839949|33|NZ_CP011546|CRISPRCasFinder 1839949-1839981 33 NC_012811 Methylorubrum extorquens AM1 megaplasmid, complete sequence 477163-477195 9 0.727
NZ_CP011546_3 3.14|1839949|33|NZ_CP011546|CRISPRCasFinder 1839949-1839981 33 NZ_KF439868 Rhodococcus hoagii strain PAM1571 plasmid pVAPN1571, complete sequence 9788-9820 9 0.727
NZ_CP011546_3 3.24|1840558|32|NZ_CP011546|CRISPRCasFinder 1840558-1840589 32 NZ_CP032348 Azospirillum brasilense strain MTCC4039 plasmid p4, complete sequence 406172-406203 9 0.719
NZ_CP011546_3 3.43|1841713|33|NZ_CP011546|CRISPRCasFinder 1841713-1841745 33 NZ_CP039644 Azospirillum sp. TSA2s plasmid p2, complete sequence 93186-93218 9 0.727
NZ_CP011546_3 3.43|1841713|33|NZ_CP011546|CRISPRCasFinder 1841713-1841745 33 NZ_CP043441 Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence 1046486-1046518 9 0.727
NZ_CP011546_3 3.47|1841957|33|NZ_CP011546|CRISPRCasFinder 1841957-1841989 33 NZ_CP041653 Streptomyces sp. RLB1-9 plasmid pRLB1-9.1, complete sequence 52148-52180 9 0.727
NZ_CP011546_3 3.94|1841951|39|NZ_CP011546|CRT 1841951-1841989 39 KX452700 UNVERIFIED: Enterobacter phage KPN7 genomic sequence 12430-12468 9 0.769
NZ_CP011546_3 3.94|1841951|39|NZ_CP011546|CRT 1841951-1841989 39 KR296691 Salmonella phage 37, complete genome 51540-51578 9 0.769
NZ_CP011546_3 3.94|1841951|39|NZ_CP011546|CRT 1841951-1841989 39 MK286578 Salmonella phage Season12, complete genome 50924-50962 9 0.769
NZ_CP011546_3 3.94|1841951|39|NZ_CP011546|CRT 1841951-1841989 39 KR296689 Salmonella phage 35, complete genome 46978-47016 9 0.769
NZ_CP011546_3 3.94|1841951|39|NZ_CP011546|CRT 1841951-1841989 39 NC_048727 Salmonella phage Siskin, complete genome 50211-50249 9 0.769
NZ_CP011546_3 3.94|1841951|39|NZ_CP011546|CRT 1841951-1841989 39 KX452699 UNVERIFIED: Salmonella phage KPN6 genomic sequence 50488-50526 9 0.769
NZ_CP011546_3 3.94|1841951|39|NZ_CP011546|CRT 1841951-1841989 39 JN871591 Salmonella phage SPN19, complete genome 8367-8405 9 0.769
NZ_CP011546_3 3.100|1839583|35|NZ_CP011546|PILER-CR 1839583-1839617 35 NC_008697 Nocardioides sp. JS614 plasmid pNOCA01, complete sequence 255734-255768 9 0.743
NZ_CP011546_3 3.105|1839887|34|NZ_CP011546|PILER-CR 1839887-1839920 34 NZ_CP030354 Novosphingobium sp. P6W plasmid pP6W1, complete sequence 469132-469165 9 0.735
NZ_CP011546_4 4.3|1843687|33|NZ_CP011546|PILER-CR,CRISPRCasFinder,CRT 1843687-1843719 33 NZ_CP007129 Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence 866939-866971 9 0.727
NZ_CP011546_4 4.3|1843687|33|NZ_CP011546|PILER-CR,CRISPRCasFinder,CRT 1843687-1843719 33 NZ_CP012383 Streptomyces ambofaciens ATCC 23877 plasmid pSAM1, complete sequence 68377-68409 9 0.727
NZ_CP011546_4 4.3|1843687|33|NZ_CP011546|PILER-CR,CRISPRCasFinder,CRT 1843687-1843719 33 MT498037 Streptomyces phage Dryad, complete genome 21565-21597 9 0.727
NZ_CP011546_4 4.4|1843748|33|NZ_CP011546|PILER-CR,CRISPRCasFinder,CRT 1843748-1843780 33 AP014044 Uncultured Mediterranean phage uvMED isolate uvMED-GF-C12-MedDCM-OCT-S24-C146, *** SEQUENCING IN PROGRESS *** 1660-1692 9 0.727
NZ_CP011546_4 4.4|1843748|33|NZ_CP011546|PILER-CR,CRISPRCasFinder,CRT 1843748-1843780 33 AP014047 Uncultured Mediterranean phage uvMED isolate uvMED-GF-C12-MedDCM-OCT-S39-C144, *** SEQUENCING IN PROGRESS *** 5173-5205 9 0.727
NZ_CP011546_4 4.17|1844541|33|NZ_CP011546|PILER-CR,CRISPRCasFinder,CRT 1844541-1844573 33 NZ_CP007794 Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence 988095-988127 9 0.727
NZ_CP011546_3 3.6|1839463|33|NZ_CP011546|CRISPRCasFinder 1839463-1839495 33 NZ_CP030772 Streptomyces sp. YIM 121038 plasmid pSSP121038, complete sequence 836273-836305 10 0.697
NZ_CP011546_3 3.8|1839585|33|NZ_CP011546|CRISPRCasFinder 1839585-1839617 33 NZ_CP034186 Deinococcus sp. S14-83 strain S14-83T plasmid unnamed2, complete sequence 80012-80044 10 0.697
NZ_CP011546_3 3.15|1840010|33|NZ_CP011546|CRISPRCasFinder 1840010-1840042 33 NZ_CP029830 Azospirillum ramasamyi strain M2T2B2 plasmid unnamed1, complete sequence 359277-359309 10 0.697
NZ_CP011546_3 3.20|1840315|33|NZ_CP011546|CRISPRCasFinder 1840315-1840347 33 NZ_CP023068 Ensifer sojae CCBAU 05684 plasmid pSJ05684b, complete sequence 1883958-1883990 10 0.697
NZ_CP011546_3 3.26|1840679|33|NZ_CP011546|CRISPRCasFinder 1840679-1840711 33 LN878149 Cronobacter phage Dev-CD-23823 complete sequence 12837-12869 10 0.697
NZ_CP011546_3 3.27|1840740|33|NZ_CP011546|CRISPRCasFinder 1840740-1840772 33 LN878149 Cronobacter phage Dev-CD-23823 complete sequence 12837-12869 10 0.697
NZ_CP011546_3 3.139|1841955|35|NZ_CP011546|PILER-CR 1841955-1841989 35 MK801735 Mycobacterium Phage Rachaly, complete genome 29080-29114 10 0.714
NZ_CP011546_4 4.2|1843626|33|NZ_CP011546|PILER-CR,CRISPRCasFinder,CRT 1843626-1843658 33 NC_010627 Paraburkholderia phymatum STM815 plasmid pBPHY02, complete sequence 561574-561606 10 0.697
NZ_CP011546_4 4.2|1843626|33|NZ_CP011546|PILER-CR,CRISPRCasFinder,CRT 1843626-1843658 33 NC_018696 Paraburkholderia phenoliruptrix BR3459a plasmid pSYMBR3459, complete sequence 755181-755213 10 0.697
NZ_CP011546_4 4.15|1844419|33|NZ_CP011546|PILER-CR,CRISPRCasFinder,CRT 1844419-1844451 33 NZ_CP017563 Paraburkholderia sprentiae WSM5005 plasmid pl1WSM5005, complete sequence 431841-431873 10 0.697
NZ_CP011546_4 4.15|1844419|33|NZ_CP011546|PILER-CR,CRISPRCasFinder,CRT 1844419-1844451 33 NZ_CP006368 Aureimonas sp. AU20 plasmid pAU20a, complete sequence 209997-210029 11 0.667

1. spacer 3.112|1840313|35|NZ_CP011546|PILER-CR matches to NZ_LR134460 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 18, complete sequence) position: , mismatch: 3, identity: 0.914

acgcc-agcatctcgccgacgtggtcaccggggtgg	CRISPR spacer
-cgccaagcagctcgccgacgtggtcaccgaggtgg	Protospacer
 **** **** *******************.*****

2. spacer 3.20|1840315|33|NZ_CP011546|CRISPRCasFinder matches to NZ_LR134460 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 18, complete sequence) position: , mismatch: 4, identity: 0.879

gccagcatctcgccgacgtggtcaccggggtgg	CRISPR spacer
ccaagcagctcgccgacgtggtcaccgaggtgg	Protospacer
 * **** *******************.*****

3. spacer 3.20|1840315|33|NZ_CP011546|CRISPRCasFinder matches to LN997843 (Streptomyces reticuli genome assembly TUE45, plasmid : II) position: , mismatch: 6, identity: 0.818

-gccagcatctcgccgacgtggtcaccggggtgg	CRISPR spacer
tgtccgcgt-tcgccgacgaggtcacccgggtgg	Protospacer
 *.* **.* ********* ******* ******

4. spacer 3.47|1841957|33|NZ_CP011546|CRISPRCasFinder matches to JN871591 (Salmonella phage SPN19, complete genome) position: , mismatch: 6, identity: 0.818

cacatcggtgaggtcgacgtcgatgcg-gttgcg	CRISPR spacer
cacatcggcgaggccgacgtcgatgcgaactac-	Protospacer
********.****.************* ..*.* 

5. spacer 3.47|1841957|33|NZ_CP011546|CRISPRCasFinder matches to KX452700 (UNVERIFIED: Enterobacter phage KPN7 genomic sequence) position: , mismatch: 6, identity: 0.818

cacatcggtgaggtcgacgtcgatgcg-gttgcg	CRISPR spacer
cacatcggcgaggccgacgtcgatgcgaactac-	Protospacer
********.****.************* ..*.* 

6. spacer 3.47|1841957|33|NZ_CP011546|CRISPRCasFinder matches to KR296691 (Salmonella phage 37, complete genome) position: , mismatch: 6, identity: 0.818

cacatcggtgaggtcgacgtcgatgcg-gttgcg	CRISPR spacer
cacatcggcgaggccgacgtcgatgcgaactac-	Protospacer
********.****.************* ..*.* 

7. spacer 3.47|1841957|33|NZ_CP011546|CRISPRCasFinder matches to MK286578 (Salmonella phage Season12, complete genome) position: , mismatch: 6, identity: 0.818

cacatcggtgaggtcgacgtcgatgcg-gttgcg	CRISPR spacer
cacatcggcgaggccgacgtcgatgcgaactac-	Protospacer
********.****.************* ..*.* 

8. spacer 3.47|1841957|33|NZ_CP011546|CRISPRCasFinder matches to KR296689 (Salmonella phage 35, complete genome) position: , mismatch: 6, identity: 0.818

cacatcggtgaggtcgacgtcgatgcg-gttgcg	CRISPR spacer
cacatcggcgaggccgacgtcgatgcgaactac-	Protospacer
********.****.************* ..*.* 

9. spacer 3.47|1841957|33|NZ_CP011546|CRISPRCasFinder matches to NC_048727 (Salmonella phage Siskin, complete genome) position: , mismatch: 6, identity: 0.818

cacatcggtgaggtcgacgtcgatgcg-gttgcg	CRISPR spacer
cacatcggcgaggccgacgtcgatgcgaactac-	Protospacer
********.****.************* ..*.* 

10. spacer 3.47|1841957|33|NZ_CP011546|CRISPRCasFinder matches to KX452699 (UNVERIFIED: Salmonella phage KPN6 genomic sequence) position: , mismatch: 6, identity: 0.818

cacatcggtgaggtcgacgtcgatgcg-gttgcg	CRISPR spacer
cacatcggcgaggccgacgtcgatgcgaactac-	Protospacer
********.****.************* ..*.* 

11. spacer 3.8|1839585|33|NZ_CP011546|CRISPRCasFinder matches to NC_008697 (Nocardioides sp. JS614 plasmid pNOCA01, complete sequence) position: , mismatch: 7, identity: 0.788

cgtggctcggcaccttcaccgacggcgaggagg	CRISPR spacer
tgccgatcggcaccttcaacgagggcgaggatg	Protospacer
.*. * ************ *** ******** *

12. spacer 3.8|1839585|33|NZ_CP011546|CRISPRCasFinder matches to NZ_AP014705 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence) position: , mismatch: 7, identity: 0.788

cgtg-gctcggcaccttcaccgacggcgaggagg	CRISPR spacer
-gcgcgctcggcaccttcacggacgtcgaaccgg	Protospacer
 *.* *************** **** ***.  **

13. spacer 3.9|1839646|33|NZ_CP011546|CRISPRCasFinder matches to MK501729 (Gordonia phage Walrus, complete genome) position: , mismatch: 7, identity: 0.788

ttggtgggggtgggggtggggctgcttggtcgg	CRISPR spacer
ttggtgggggtgggggtgcgcctggccgggggg	Protospacer
****************** * *** ..**  **

14. spacer 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder matches to MN234223 (Mycobacterium phage Philly, complete genome) position: , mismatch: 7, identity: 0.781

gggacgcgttcaccgacgggatcaac-cccgtg	CRISPR spacer
cgtacgcgatcaccgacgcgatcaacgctcgc-	Protospacer
 * ***** ********* ******* *.**. 

15. spacer 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder matches to KP027207 (Mycobacterium phage Chandler, complete genome) position: , mismatch: 7, identity: 0.781

gggacgcgttcaccgacgggatcaac-cccgtg	CRISPR spacer
cgtacgcgatcaccgacgcgatcaacgctcgc-	Protospacer
 * ***** ********* ******* *.**. 

16. spacer 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder matches to MN096360 (Mycobacterium phage Rita1961, complete genome) position: , mismatch: 7, identity: 0.781

gggacgcgttcaccgacgggatcaac-cccgtg	CRISPR spacer
cgtacgcgatcaccgacgcgatcaacgctcgc-	Protospacer
 * ***** ********* ******* *.**. 

17. spacer 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder matches to MG839014 (Mycobacterium phage RagingRooster, complete genome) position: , mismatch: 7, identity: 0.781

gggacgcgttcaccgacgggatcaac-cccgtg	CRISPR spacer
cgtacgcgatcaccgacgcgatcaacgctcgc-	Protospacer
 * ***** ********* ******* *.**. 

18. spacer 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder matches to KJ194581 (Mycobacterium phage Audrey, complete genome) position: , mismatch: 7, identity: 0.781

gggacgcgttcaccgacgggatcaac-cccgtg	CRISPR spacer
cgtacgcgatcaccgacgcgatcaacgctcgc-	Protospacer
 * ***** ********* ******* *.**. 

19. spacer 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder matches to KR080203 (Mycobacterium phage OrangeOswald, complete genome) position: , mismatch: 7, identity: 0.781

gggacgcgttcaccgacgggatcaac-cccgtg	CRISPR spacer
cgtacgcgatcaccgacgcgatcaacgctcgc-	Protospacer
 * ***** ********* ******* *.**. 

20. spacer 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder matches to MH513976 (Mycobacterium phage Morty007, complete genome) position: , mismatch: 7, identity: 0.781

gggacgcgttcaccgacgggatcaac-cccgtg	CRISPR spacer
cgtacgcgatcaccgacgcgatcaacgctcgc-	Protospacer
 * ***** ********* ******* *.**. 

21. spacer 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder matches to MH051265 (Mycobacterium phage Yahalom, complete genome) position: , mismatch: 7, identity: 0.781

gggacgcgttcaccgacgggatcaac-cccgtg	CRISPR spacer
cgtacgcgatcaccgacgcgatcaacgctcgc-	Protospacer
 * ***** ********* ******* *.**. 

22. spacer 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder matches to MH316565 (Mycobacterium phage Mortcellus, complete genome) position: , mismatch: 7, identity: 0.781

gggacgcgttcaccgacgggatcaac-cccgtg	CRISPR spacer
cgtacgcgatcaccgacgcgatcaacgctcgc-	Protospacer
 * ***** ********* ******* *.**. 

23. spacer 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder matches to MT310871 (Mycobacterium phage Jackstina, complete genome) position: , mismatch: 7, identity: 0.781

gggacgcgttcaccgacgggatcaac-cccgtg	CRISPR spacer
cgtacgcgatcaccgacgcgatcaacgctcgc-	Protospacer
 * ***** ********* ******* *.**. 

24. spacer 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder matches to MK359357 (Mycobacterium phage RomaT, complete genome) position: , mismatch: 7, identity: 0.781

gggacgcgttcaccgacgggatcaac-cccgtg	CRISPR spacer
cgtacgcgatcaccgacgcgatcaacgctcgc-	Protospacer
 * ***** ********* ******* *.**. 

25. spacer 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder matches to JF704095 (Mycobacterium phage Daisy, complete sequence) position: , mismatch: 7, identity: 0.781

gggacgcgttcaccgacgggatcaac-cccgtg	CRISPR spacer
cgtacgcgatcaccgacgcgatcaacgctcgc-	Protospacer
 * ***** ********* ******* *.**. 

26. spacer 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder matches to EU816589 (Mycobacterium phage Phaedrus, complete genome) position: , mismatch: 7, identity: 0.781

gggacgcgttcaccgacgggatcaac-cccgtg	CRISPR spacer
cgtacgcgatcaccgacgcgatcaacgctcgc-	Protospacer
 * ***** ********* ******* *.**. 

27. spacer 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder matches to MN096359 (Mycobacterium phage Obutu, complete genome) position: , mismatch: 7, identity: 0.781

gggacgcgttcaccgacgggatcaac-cccgtg	CRISPR spacer
cgtacgcgatcaccgacgcgatcaacgctcgc-	Protospacer
 * ***** ********* ******* *.**. 

28. spacer 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder matches to MK061414 (Mycobacterium phage Marley1013, complete genome) position: , mismatch: 7, identity: 0.781

gggacgcgttcaccgacgggatcaac-cccgtg	CRISPR spacer
cgtacgcgatcaccgacgcgatcaacgctcgc-	Protospacer
 * ***** ********* ******* *.**. 

29. spacer 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder matches to MT952851 (Mycobacterium phage Gervas, complete genome) position: , mismatch: 7, identity: 0.781

gggacgcgttcaccgacgggatcaac-cccgtg	CRISPR spacer
cgtacgcgatcaccgacgcgatcaacgctcgc-	Protospacer
 * ***** ********* ******* *.**. 

30. spacer 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder matches to MK059749 (Mycobacterium phage CRB2, complete genome) position: , mismatch: 7, identity: 0.781

gggacgcgttcaccgacgggatcaaccccgtg---	CRISPR spacer
aggacgcgctcaccgactggatca---ccgagttc	Protospacer
.*******.******** ******   *** *   

31. spacer 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder matches to MG925353 (Mycobacterium phage Nozo, complete genome) position: , mismatch: 7, identity: 0.781

gggacgcgttcaccgacgggatcaac-cccgtg	CRISPR spacer
cgtacgcgatcaccgacgcgatcaacgctcgc-	Protospacer
 * ***** ********* ******* *.**. 

32. spacer 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder matches to KJ194584 (Mycobacterium phage Heathcliff, complete genome) position: , mismatch: 7, identity: 0.781

gggacgcgttcaccgacgggatcaac-cccgtg	CRISPR spacer
cgtacgcgatcaccgacgcgatcaacgctcgc-	Protospacer
 * ***** ********* ******* *.**. 

33. spacer 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder matches to MN444872 (Mycobacterium phage SynergyX, complete genome) position: , mismatch: 7, identity: 0.781

gggacgcgttcaccgacgggatcaac-cccgtg	CRISPR spacer
cgtacgcgatcaccgacgcgatcaacgctcgc-	Protospacer
 * ***** ********* ******* *.**. 

34. spacer 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder matches to MH576977 (Mycobacterium phage Tydolla, complete genome) position: , mismatch: 7, identity: 0.781

gggacgcgttcaccgacgggatcaac-cccgtg	CRISPR spacer
cgtacgcgatcaccgacgcgatcaacgctcgc-	Protospacer
 * ***** ********* ******* *.**. 

35. spacer 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder matches to MG925338 (Mycobacterium phage ChaChing, complete genome) position: , mismatch: 7, identity: 0.781

gggacgcgttcaccgacgggatcaac-cccgtg	CRISPR spacer
cgtacgcgatcaccgacgcgatcaacgctcgc-	Protospacer
 * ***** ********* ******* *.**. 

36. spacer 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder matches to NC_023742 (Mycobacterium phage Akoma, complete genome) position: , mismatch: 7, identity: 0.781

gggacgcgttcaccgacgggatcaac-cccgtg	CRISPR spacer
cgtacgcgatcaccgacgcgatcaacgctcgc-	Protospacer
 * ***** ********* ******* *.**. 

37. spacer 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder matches to MG920059 (Mycobacterium phage Baloo, complete genome) position: , mismatch: 7, identity: 0.781

gggacgcgttcaccgacgggatcaac-cccgtg	CRISPR spacer
cgtacgcgatcaccgacgcgatcaacgctcgc-	Protospacer
 * ***** ********* ******* *.**. 

38. spacer 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder matches to NC_023686 (Mycobacterium phage Gadjet, complete genome) position: , mismatch: 7, identity: 0.781

gggacgcgttcaccgacgggatcaac-cccgtg	CRISPR spacer
cgtacgcgatcaccgacgcgatcaacgctcgc-	Protospacer
 * ***** ********* ******* *.**. 

39. spacer 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder matches to KR080205 (Mycobacterium phage Corofin, complete genome) position: , mismatch: 7, identity: 0.781

gggacgcgttcaccgacgggatcaac-cccgtg	CRISPR spacer
cgtacgcgatcaccgacgcgatcaacgctcgc-	Protospacer
 * ***** ********* ******* *.**. 

40. spacer 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder matches to NC_041965 (Mycobacterium phage Athena, complete genome) position: , mismatch: 7, identity: 0.781

gggacgcgttcaccgacgggatcaac-cccgtg	CRISPR spacer
cgtacgcgatcaccgacgcgatcaacgctcgc-	Protospacer
 * ***** ********* ******* *.**. 

41. spacer 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder matches to DQ398049 (Mycobacterium phage Pipefish, complete genome) position: , mismatch: 7, identity: 0.781

gggacgcgttcaccgacgggatcaac-cccgtg	CRISPR spacer
cgtacgcgatcaccgacgcgatcaacgctcgc-	Protospacer
 * ***** ********* ******* *.**. 

42. spacer 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder matches to KF493879 (Mycobacterium phage Bernardo, complete genome) position: , mismatch: 7, identity: 0.781

gggacgcgttcaccgacgggatcaac-cccgtg	CRISPR spacer
cgtacgcgatcaccgacgcgatcaacgctcgc-	Protospacer
 * ***** ********* ******* *.**. 

43. spacer 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder matches to MT310892 (Mycobacterium phage Compostia, complete genome) position: , mismatch: 7, identity: 0.781

gggacgcgttcaccgacgggatcaac-cccgtg	CRISPR spacer
cgtacgcgatcaccgacgcgatcaacgctcgc-	Protospacer
 * ***** ********* ******* *.**. 

44. spacer 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder matches to JN699018 (Mycobacterium phage Kamiyu, complete genome) position: , mismatch: 7, identity: 0.781

gggacgcgttcaccgacgggatcaac-cccgtg	CRISPR spacer
cgtacgcgatcaccgacgcgatcaacgctcgc-	Protospacer
 * ***** ********* ******* *.**. 

45. spacer 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder matches to NC_012027 (Mycobacterium phage Phlyer, complete genome) position: , mismatch: 7, identity: 0.781

gggacgcgttcaccgacgggatcaac-cccgtg	CRISPR spacer
cgtacgcgatcaccgacgcgatcaacgctcgc-	Protospacer
 * ***** ********* ******* *.**. 

46. spacer 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder matches to MN444873 (Mycobacterium phage Abinghost, complete genome) position: , mismatch: 7, identity: 0.781

gggacgcgttcaccgacgggatcaac-cccgtg	CRISPR spacer
cgtacgcgatcaccgacgcgatcaacgctcgc-	Protospacer
 * ***** ********* ******* *.**. 

47. spacer 3.14|1839949|33|NZ_CP011546|CRISPRCasFinder matches to NC_012852 (Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132504, complete sequence) position: , mismatch: 7, identity: 0.788

gcctagcacggcgtgcgcgtcggcggggaggtc	CRISPR spacer
gcgcagcacggcgtgcgcgtcggtgcggtgctg	Protospacer
** .*******************.* ** * * 

48. spacer 3.14|1839949|33|NZ_CP011546|CRISPRCasFinder matches to NZ_CP018233 (Rhizobium leguminosarum strain Vaf-108 plasmid unnamed5, complete sequence) position: , mismatch: 7, identity: 0.788

gcctagcacggcgtgcgcgtcggcggggaggtc	CRISPR spacer
gcgcagcacggcgtgcgcgtcggtgcggtgctg	Protospacer
** .*******************.* ** * * 

49. spacer 3.15|1840010|33|NZ_CP011546|CRISPRCasFinder matches to NZ_CP021029 (Rhizobium sp. TAL182 plasmid pRetTAL182e, complete sequence) position: , mismatch: 7, identity: 0.788

gtagacgccgactgcttcggcgagggcgaggag	CRISPR spacer
gtcaccgtcaactgcttcggcgagggcgatgcg	Protospacer
** . **.*.******************* * *

50. spacer 3.15|1840010|33|NZ_CP011546|CRISPRCasFinder matches to NZ_CP013515 (Rhizobium sp. N1314 plasmid pRspN1314d, complete sequence) position: , mismatch: 7, identity: 0.788

gtagacgccgactgcttcggcgagggcgaggag	CRISPR spacer
gtcaccgtcaactgcttcggcgagggcgatgcg	Protospacer
** . **.*.******************* * *

51. spacer 3.15|1840010|33|NZ_CP011546|CRISPRCasFinder matches to AP014720 (Arthrobacter sp. Hiyo8 plasmid pHiyo8-1 DNA, complete genome, strain: Hiyo8) position: , mismatch: 7, identity: 0.788

gtagacgccgactgcttcggcgagggcgaggag	CRISPR spacer
gttgtgccagattgctgcggcgagggcgaggag	Protospacer
** *   * **.**** ****************

52. spacer 3.15|1840010|33|NZ_CP011546|CRISPRCasFinder matches to NZ_CP013605 (Rhizobium sp. N731 plasmid pRspN731d, complete sequence) position: , mismatch: 7, identity: 0.788

gtagacgccgactgcttcggcgagggcgaggag	CRISPR spacer
gtcaccgtcaactgcttcggcgagggcgatgcg	Protospacer
** . **.*.******************* * *

53. spacer 3.24|1840558|32|NZ_CP011546|CRISPRCasFinder matches to NZ_CP053657 (Bacillus cereus strain CTMA_1571 plasmid p.1, complete sequence) position: , mismatch: 7, identity: 0.781

ctatttgggggtttattttggcggccaaatag---	CRISPR spacer
ctatttggggtattattttggcg---aagtataac	Protospacer
**********  ***********   **.**    

54. spacer 3.32|1841045|32|NZ_CP011546|CRISPRCasFinder matches to NZ_CP034999 (Rhizobium acidisoli strain FH23 plasmid pRapFH23a, complete sequence) position: , mismatch: 7, identity: 0.781

ccgagagacataccgccgaggcagactacagc	CRISPR spacer
acgagagacataccgccggggcaggaaacggg	Protospacer
 *****************.*****.  **.* 

55. spacer 3.67|1840309|39|NZ_CP011546|CRT matches to NZ_LR134460 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 18, complete sequence) position: , mismatch: 7, identity: 0.821

gaaaacgcc-agcatctcgccgacgtggtcaccggggtgg	CRISPR spacer
-tgggcgccaagcagctcgccgacgtggtcaccgaggtgg	Protospacer
  ...**** **** *******************.*****

56. spacer 3.139|1841955|35|NZ_CP011546|PILER-CR matches to JN871591 (Salmonella phage SPN19, complete genome) position: , mismatch: 7, identity: 0.8

accacatcggtgaggtcgacgtcgatgcg-gttgcg	CRISPR spacer
tccacatcggcgaggccgacgtcgatgcgaactac-	Protospacer
 *********.****.************* ..*.* 

57. spacer 3.139|1841955|35|NZ_CP011546|PILER-CR matches to KX452700 (UNVERIFIED: Enterobacter phage KPN7 genomic sequence) position: , mismatch: 7, identity: 0.8

accacatcggtgaggtcgacgtcgatgcg-gttgcg	CRISPR spacer
tccacatcggcgaggccgacgtcgatgcgaactac-	Protospacer
 *********.****.************* ..*.* 

58. spacer 3.139|1841955|35|NZ_CP011546|PILER-CR matches to KR296691 (Salmonella phage 37, complete genome) position: , mismatch: 7, identity: 0.8

accacatcggtgaggtcgacgtcgatgcg-gttgcg	CRISPR spacer
tccacatcggcgaggccgacgtcgatgcgaactac-	Protospacer
 *********.****.************* ..*.* 

59. spacer 3.139|1841955|35|NZ_CP011546|PILER-CR matches to MK286578 (Salmonella phage Season12, complete genome) position: , mismatch: 7, identity: 0.8

accacatcggtgaggtcgacgtcgatgcg-gttgcg	CRISPR spacer
tccacatcggcgaggccgacgtcgatgcgaactac-	Protospacer
 *********.****.************* ..*.* 

60. spacer 3.139|1841955|35|NZ_CP011546|PILER-CR matches to KR296689 (Salmonella phage 35, complete genome) position: , mismatch: 7, identity: 0.8

accacatcggtgaggtcgacgtcgatgcg-gttgcg	CRISPR spacer
tccacatcggcgaggccgacgtcgatgcgaactac-	Protospacer
 *********.****.************* ..*.* 

61. spacer 3.139|1841955|35|NZ_CP011546|PILER-CR matches to NC_048727 (Salmonella phage Siskin, complete genome) position: , mismatch: 7, identity: 0.8

accacatcggtgaggtcgacgtcgatgcg-gttgcg	CRISPR spacer
tccacatcggcgaggccgacgtcgatgcgaactac-	Protospacer
 *********.****.************* ..*.* 

62. spacer 3.139|1841955|35|NZ_CP011546|PILER-CR matches to KX452699 (UNVERIFIED: Salmonella phage KPN6 genomic sequence) position: , mismatch: 7, identity: 0.8

accacatcggtgaggtcgacgtcgatgcg-gttgcg	CRISPR spacer
tccacatcggcgaggccgacgtcgatgcgaactac-	Protospacer
 *********.****.************* ..*.* 

63. spacer 4.6|1843870|33|NZ_CP011546|PILER-CR,CRISPRCasFinder,CRT matches to MN586029 (Mycobacterium phage Hannaconda, complete genome) position: , mismatch: 7, identity: 0.788

tgctg-agcctgttcggggagctcgtcggctggg	CRISPR spacer
-gttacatcctgtacggggagcttgtcggctgga	Protospacer
 *.*. * ***** *********.*********.

64. spacer 4.6|1843870|33|NZ_CP011546|PILER-CR,CRISPRCasFinder,CRT matches to MK524516 (Mycobacterium phage Bobby, complete genome) position: , mismatch: 7, identity: 0.788

tgctg-agcctgttcggggagctcgtcggctggg	CRISPR spacer
-gttacatcctgtacggggagcttgtcggctgga	Protospacer
 *.*. * ***** *********.*********.

65. spacer 4.6|1843870|33|NZ_CP011546|PILER-CR,CRISPRCasFinder,CRT matches to MN062701 (Mycobacterium phage Dallas, complete genome) position: , mismatch: 7, identity: 0.788

tgctg-agcctgttcggggagctcgtcggctggg	CRISPR spacer
-gttacatcctgtacggggagcttgtcggctgga	Protospacer
 *.*. * ***** *********.*********.

66. spacer 4.6|1843870|33|NZ_CP011546|PILER-CR,CRISPRCasFinder,CRT matches to MK524529 (Mycobacterium phage Phoebus, complete genome) position: , mismatch: 7, identity: 0.788

tgctg-agcctgttcggggagctcgtcggctggg	CRISPR spacer
-gttacatcctgtacggggagcttgtcggctgga	Protospacer
 *.*. * ***** *********.*********.

67. spacer 3.8|1839585|33|NZ_CP011546|CRISPRCasFinder matches to NZ_CP012399 (Chelatococcus sp. CO-6 plasmid pCO-6, complete sequence) position: , mismatch: 8, identity: 0.758

cgtggctcggcaccttcaccgacggcgaggagg	CRISPR spacer
gcttcctcggcgccttcgccgacggcgagatgg	Protospacer
  *  ******.*****.***********. **

68. spacer 3.9|1839646|33|NZ_CP011546|CRISPRCasFinder matches to MN586031 (Gordonia phage Gambino, complete genome) position: , mismatch: 8, identity: 0.758

ttggtgggggtgggggtggggctgcttggtcgg	CRISPR spacer
ttggtgggggtgggggtgcgcctggccgtgggg	Protospacer
****************** * *** ..*   **

69. spacer 3.9|1839646|33|NZ_CP011546|CRISPRCasFinder matches to KU998236 (Gordonia phage Blueberry, complete genome) position: , mismatch: 8, identity: 0.758

ttggtgggggtgggggtggggctgcttggtcgg	CRISPR spacer
ttggtgggggtgggggtgcgcctggccgtgggg	Protospacer
****************** * *** ..*   **

70. spacer 3.9|1839646|33|NZ_CP011546|CRISPRCasFinder matches to MT723935 (Gordonia phage Azula, complete genome) position: , mismatch: 8, identity: 0.758

ttggtgggggtgggggtggggctgcttggtcgg	CRISPR spacer
ttggtgggggtgggggtgcgcctggccgtgggg	Protospacer
****************** * *** ..*   **

71. spacer 3.9|1839646|33|NZ_CP011546|CRISPRCasFinder matches to MH536818 (Gordonia phage Frokostdame, complete genome) position: , mismatch: 8, identity: 0.758

ttggtgggggtgggggtggggctgcttggtcgg	CRISPR spacer
ttggtgggggtgggggtgcgcctggccgtgggg	Protospacer
****************** * *** ..*   **

72. spacer 3.9|1839646|33|NZ_CP011546|CRISPRCasFinder matches to KX557275 (Gordonia phage CarolAnn, complete genome) position: , mismatch: 8, identity: 0.758

ttggtgggggtgggggtggggctgcttggtcgg	CRISPR spacer
ttggtgggggtgggggtgcgcctggccgtgggg	Protospacer
****************** * *** ..*   **

73. spacer 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder matches to NZ_CP027859 (Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence) position: , mismatch: 8, identity: 0.75

gggacgcgttcaccgacgggatcaaccccgtg	CRISPR spacer
gggacgcggtcgccgacgggatcgcccggggc	Protospacer
******** **.***********. **  *  

74. spacer 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder matches to NZ_CP032054 (Streptomyces clavuligerus strain F1D-5 plasmid pSCL1, complete sequence) position: , mismatch: 8, identity: 0.75

gggacgcgttcaccgacgggatcaaccccgtg	CRISPR spacer
gggacgcggtcgccgacgggatcgcccggggc	Protospacer
******** **.***********. **  *  

75. spacer 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder matches to NZ_CP032054 (Streptomyces clavuligerus strain F1D-5 plasmid pSCL1, complete sequence) position: , mismatch: 8, identity: 0.75

gggacgcgttcaccgacgggatcaaccccgtg	CRISPR spacer
gggacgcggtcgccgacgggatcgcccggggc	Protospacer
******** **.***********. **  *  

76. spacer 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder matches to NZ_CP016560 (Streptomyces clavuligerus strain F613-1 plasmid pSCL4, complete sequence) position: , mismatch: 8, identity: 0.75

gggacgcgttcaccgacgggatcaaccccgtg	CRISPR spacer
gggacgcggtcgccgacgggatcgcccggggc	Protospacer
******** **.***********. **  *  

77. spacer 3.11|1839768|32|NZ_CP011546|CRISPRCasFinder matches to NZ_CP021083 (Deinococcus ficus strain CC-FR2-10 plasmid pDFI2, complete sequence) position: , mismatch: 8, identity: 0.75

gggacgcgttcaccgacgggatcaaccccgtg	CRISPR spacer
ggggcgcgttcaccgaccggatcgaggtcatt	Protospacer
***.************* *****.*  .*.* 

78. spacer 3.13|1839889|32|NZ_CP011546|CRISPRCasFinder matches to NZ_CP030354 (Novosphingobium sp. P6W plasmid pP6W1, complete sequence) position: , mismatch: 8, identity: 0.75

cccatcggaatctccgggttcaggcgacggcc	CRISPR spacer
cccatcggaatgtccgcgttcagtagatcggt	Protospacer
*********** **** ******  **. * .

79. spacer 3.15|1840010|33|NZ_CP011546|CRISPRCasFinder matches to NZ_CP020952 (Rhizobium sp. CIAT894 plasmid pRheCIAT894e, complete sequence) position: , mismatch: 8, identity: 0.758

gtagacgccgactgcttcggcgagggcgaggag	CRISPR spacer
gtcaccgtcaactgcttcggcgagggcgatgcc	Protospacer
** . **.*.******************* *  

80. spacer 3.20|1840315|33|NZ_CP011546|CRISPRCasFinder matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 8, identity: 0.758

gccagcatctcgccgacgtggtcaccggggtgg	CRISPR spacer
tcaaggcgctcaccgacgtgctcaccggggtgc	Protospacer
 * **   ***.******** *********** 

81. spacer 3.20|1840315|33|NZ_CP011546|CRISPRCasFinder matches to NZ_CP030864 (Streptomyces globosus strain LZH-48 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.758

gccagcatctcgccgacgtggtcaccggggtgg	CRISPR spacer
agccgcagctcgccgaagtggtcaccggtggcg	Protospacer
. * *** ******** *********** *  *

82. spacer 3.20|1840315|33|NZ_CP011546|CRISPRCasFinder matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 8, identity: 0.758

gccagcatctcgccgacgtggtcaccggggtgg	CRISPR spacer
tcaaggcgctcaccgacgtgctcaccggggtgc	Protospacer
 * **   ***.******** *********** 

83. spacer 3.43|1841713|33|NZ_CP011546|CRISPRCasFinder matches to NZ_CP046333 (Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3) position: , mismatch: 8, identity: 0.758

atcggcgggatgctgctggtcaacctcatggtg-----	CRISPR spacer
atcggcgtgatgccgctggtcaac-----gatgcacgc	Protospacer
******* *****.**********     *.**     

84. spacer 3.43|1841713|33|NZ_CP011546|CRISPRCasFinder matches to NC_007974 (Cupriavidus metallidurans CH34 megaplasmid, complete sequence) position: , mismatch: 8, identity: 0.758

atcggcgggatgctgctggtcaacctcatggtg-----	CRISPR spacer
atcggcgtgatgccgctggtcaac-----gatgcacgc	Protospacer
******* *****.**********     *.**     

85. spacer 3.103|1839766|34|NZ_CP011546|PILER-CR matches to NZ_CP032054 (Streptomyces clavuligerus strain F1D-5 plasmid pSCL1, complete sequence) position: , mismatch: 8, identity: 0.765

ccgggacgcgttcaccgacgggatcaaccccgtg	CRISPR spacer
ccgggacgcggtcgccgacgggatcgcccggggc	Protospacer
********** **.***********. **  *  

86. spacer 3.103|1839766|34|NZ_CP011546|PILER-CR matches to NZ_CP032054 (Streptomyces clavuligerus strain F1D-5 plasmid pSCL1, complete sequence) position: , mismatch: 8, identity: 0.765

ccgggacgcgttcaccgacgggatcaaccccgtg	CRISPR spacer
ccgggacgcggtcgccgacgggatcgcccggggc	Protospacer
********** **.***********. **  *  

87. spacer 3.103|1839766|34|NZ_CP011546|PILER-CR matches to NZ_CP027859 (Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence) position: , mismatch: 8, identity: 0.765

ccgggacgcgttcaccgacgggatcaaccccgtg	CRISPR spacer
ccgggacgcggtcgccgacgggatcgcccggggc	Protospacer
********** **.***********. **  *  

88. spacer 3.103|1839766|34|NZ_CP011546|PILER-CR matches to NZ_CP016560 (Streptomyces clavuligerus strain F613-1 plasmid pSCL4, complete sequence) position: , mismatch: 8, identity: 0.765

ccgggacgcgttcaccgacgggatcaaccccgtg	CRISPR spacer
ccgggacgcggtcgccgacgggatcgcccggggc	Protospacer
********** **.***********. **  *  

89. spacer 3.103|1839766|34|NZ_CP011546|PILER-CR matches to NZ_CP021083 (Deinococcus ficus strain CC-FR2-10 plasmid pDFI2, complete sequence) position: , mismatch: 8, identity: 0.765

ccgggacgcgttcaccgacgggatcaaccccgtg	CRISPR spacer
ccggggcgcgttcaccgaccggatcgaggtcatt	Protospacer
*****.************* *****.*  .*.* 

90. spacer 4.6|1843870|33|NZ_CP011546|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007070 (Rhizobium leguminosarum bv. trifolii CB782 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

tgctgagcctgttcggggagctcgtcggctggg	CRISPR spacer
tggggagcctcttcggggagttcgtcggaggta	Protospacer
**  ****** *********.*******  * .

91. spacer 4.8|1843992|33|NZ_CP011546|PILER-CR,CRISPRCasFinder,CRT matches to JF501022 (Klebsiella phage KP36, complete genome) position: , mismatch: 8, identity: 0.758

gatctcgcgcccgtcgatggtttcatcgatcag	CRISPR spacer
cgcgtagcgcccttcgatgatttcatcgatctg	Protospacer
 .. * ****** ******.*********** *

92. spacer 4.8|1843992|33|NZ_CP011546|PILER-CR,CRISPRCasFinder,CRT matches to NC_016592 (Burkholderia sp. YI23 plasmid byi_3p, complete sequence) position: , mismatch: 8, identity: 0.758

gatctcgcgcccgtcgatggtttcatcgatcag	CRISPR spacer
cagctccagcccgtcgatggtttcatcaaccgc	Protospacer
 * ***  *******************.*.*. 

93. spacer 4.15|1844419|33|NZ_CP011546|PILER-CR,CRISPRCasFinder,CRT matches to NC_013283 (Cronobacter turicensis z3032 plasmid pCTU1, complete sequence) position: , mismatch: 8, identity: 0.758

gccatagccgcgcgcgaacccggcggggccgag	CRISPR spacer
gttttcttcgcgctcgaacccggcggcgccgag	Protospacer
*.. *  .***** ************ ******

94. spacer 4.17|1844541|33|NZ_CP011546|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030763 (Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.758

gctggaccgccgcccaccacacgccgcaggaat	CRISPR spacer
tcatgaccgccgcgcacgacacgccgcagacag	Protospacer
 *  ********* *** ***********. * 

95. spacer 3.8|1839585|33|NZ_CP011546|CRISPRCasFinder matches to AGJI02000011 (Saccharomonospora glauca K62 plasmid pSACGL01, complete sequence, whole genome shotgun sequence) position: , mismatch: 9, identity: 0.727

cgtggctcggcaccttcaccgacggcgaggagg	CRISPR spacer
ttgagatcggcccctacaccgacggcgagggcg	Protospacer
.  .* ***** *** **************. *

96. spacer 3.10|1839707|33|NZ_CP011546|CRISPRCasFinder matches to NC_015851 (Acidithiobacillus caldus SM-1 megaplasmid, complete sequence) position: , mismatch: 9, identity: 0.727

cacccacgatcaccatacgccgctccccccacc	CRISPR spacer
atccggtgatcaccatatgccgctcaccccatg	Protospacer
  ** ..**********.******* *****. 

97. spacer 3.10|1839707|33|NZ_CP011546|CRISPRCasFinder matches to NZ_CP026329 (Acidithiobacillus caldus strain MTH-04 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.727

cacccacgatcaccatacgccgctccccccacc	CRISPR spacer
atccggtgatcaccatatgccgctcaccccatg	Protospacer
  ** ..**********.******* *****. 

98. spacer 3.14|1839949|33|NZ_CP011546|CRISPRCasFinder matches to NZ_KX443401 (Rhodococcus hoagii strain PAM1572 plasmid pVAPN1572, complete sequence) position: , mismatch: 9, identity: 0.727

gcctagcacggcgtgcgcgtcggcggggaggtc	CRISPR spacer
cccgtgcacggcgtgcgcgtcggggtggatcgg	Protospacer
 **  ****************** * ***    

99. spacer 3.14|1839949|33|NZ_CP011546|CRISPRCasFinder matches to NZ_KX443399 (Rhodococcus hoagii strain PAM1354 plasmid pVAPA1354, complete sequence) position: , mismatch: 9, identity: 0.727

gcctagcacggcgtgcgcgtcggcggggaggtc	CRISPR spacer
cccgtgcacggcgtgcgcgtcggggtggatcgg	Protospacer
 **  ****************** * ***    

100. spacer 3.14|1839949|33|NZ_CP011546|CRISPRCasFinder matches to NZ_KX443400 (Rhodococcus hoagii strain PAM1557 plasmid pVAPN1557, complete sequence) position: , mismatch: 9, identity: 0.727

gcctagcacggcgtgcgcgtcggcggggaggtc	CRISPR spacer
cccgtgcacggcgtgcgcgtcggggtggatcgg	Protospacer
 **  ****************** * ***    

101. spacer 3.14|1839949|33|NZ_CP011546|CRISPRCasFinder matches to NZ_KX443398 (Rhodococcus hoagii strain PAM1204 plasmid pVAPN1204, complete sequence) position: , mismatch: 9, identity: 0.727

gcctagcacggcgtgcgcgtcggcggggaggtc	CRISPR spacer
cccgtgcacggcgtgcgcgtcggggtggatcgg	Protospacer
 **  ****************** * ***    

102. spacer 3.14|1839949|33|NZ_CP011546|CRISPRCasFinder matches to NZ_KP851975 (Rhodococcus hoagii strain PAM2012 plasmid pVAPN2012, complete sequence) position: , mismatch: 9, identity: 0.727

gcctagcacggcgtgcgcgtcggcggggaggtc	CRISPR spacer
cccgtgcacggcgtgcgcgtcggggtggatcgg	Protospacer
 **  ****************** * ***    

103. spacer 3.14|1839949|33|NZ_CP011546|CRISPRCasFinder matches to NC_012811 (Methylorubrum extorquens AM1 megaplasmid, complete sequence) position: , mismatch: 9, identity: 0.727

gcctagcacggcgtgcgcgtcggcggggaggtc	CRISPR spacer
ggcggccacgtcgtgggcgtcggcggggagcgg	Protospacer
* * . **** **** **************   

104. spacer 3.14|1839949|33|NZ_CP011546|CRISPRCasFinder matches to NZ_KF439868 (Rhodococcus hoagii strain PAM1571 plasmid pVAPN1571, complete sequence) position: , mismatch: 9, identity: 0.727

gcctagcacggcgtgcgcgtcggcggggaggtc	CRISPR spacer
cccgtgcacggcgtgcgcgtcggggtggatcgg	Protospacer
 **  ****************** * ***    

105. spacer 3.24|1840558|32|NZ_CP011546|CRISPRCasFinder matches to NZ_CP032348 (Azospirillum brasilense strain MTCC4039 plasmid p4, complete sequence) position: , mismatch: 9, identity: 0.719

ctatttgggggtttattttggcggccaaatag	CRISPR spacer
ccttcgcttggttgatcttggcggccaaatag	Protospacer
*. *.    **** **.***************

106. spacer 3.43|1841713|33|NZ_CP011546|CRISPRCasFinder matches to NZ_CP039644 (Azospirillum sp. TSA2s plasmid p2, complete sequence) position: , mismatch: 9, identity: 0.727

atcggcgggatgctgctggtcaacctcatggtg	CRISPR spacer
cccggcggcatgccgctggtcaacctgtcgccg	Protospacer
 .****** ****.************  .* .*

107. spacer 3.43|1841713|33|NZ_CP011546|CRISPRCasFinder matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.727

atcggcgggatgctgctggtcaacctcatggtg	CRISPR spacer
atcggcgtgatgccgctggtcaacgacaaccgc	Protospacer
******* *****.**********  **     

108. spacer 3.47|1841957|33|NZ_CP011546|CRISPRCasFinder matches to NZ_CP041653 (Streptomyces sp. RLB1-9 plasmid pRLB1-9.1, complete sequence) position: , mismatch: 9, identity: 0.727

cacatcggtgaggtcgacgtcgatgcggttgcg	CRISPR spacer
ctgggcttcgaggtcggcgtcgatgccgttgcg	Protospacer
*  . *  .*******.********* ******

109. spacer 3.94|1841951|39|NZ_CP011546|CRT matches to KX452700 (UNVERIFIED: Enterobacter phage KPN7 genomic sequence) position: , mismatch: 9, identity: 0.769

gaaaaccacatcggtgaggtcgacgtcgatgcg-gttgcg	CRISPR spacer
ggtatccacatcggcgaggccgacgtcgatgcgaactac-	Protospacer
*. * *********.****.************* ..*.* 

110. spacer 3.94|1841951|39|NZ_CP011546|CRT matches to KR296691 (Salmonella phage 37, complete genome) position: , mismatch: 9, identity: 0.769

gaaaaccacatcggtgaggtcgacgtcgatgcg-gttgcg	CRISPR spacer
ggtatccacatcggcgaggccgacgtcgatgcgaactac-	Protospacer
*. * *********.****.************* ..*.* 

111. spacer 3.94|1841951|39|NZ_CP011546|CRT matches to MK286578 (Salmonella phage Season12, complete genome) position: , mismatch: 9, identity: 0.769

gaaaaccacatcggtgaggtcgacgtcgatgcg-gttgcg	CRISPR spacer
ggtatccacatcggcgaggccgacgtcgatgcgaactac-	Protospacer
*. * *********.****.************* ..*.* 

112. spacer 3.94|1841951|39|NZ_CP011546|CRT matches to KR296689 (Salmonella phage 35, complete genome) position: , mismatch: 9, identity: 0.769

gaaaaccacatcggtgaggtcgacgtcgatgcg-gttgcg	CRISPR spacer
ggtatccacatcggcgaggccgacgtcgatgcgaactac-	Protospacer
*. * *********.****.************* ..*.* 

113. spacer 3.94|1841951|39|NZ_CP011546|CRT matches to NC_048727 (Salmonella phage Siskin, complete genome) position: , mismatch: 9, identity: 0.769

gaaaaccacatcggtgaggtcgacgtcgatgcg-gttgcg	CRISPR spacer
ggtatccacatcggcgaggccgacgtcgatgcgaactac-	Protospacer
*. * *********.****.************* ..*.* 

114. spacer 3.94|1841951|39|NZ_CP011546|CRT matches to KX452699 (UNVERIFIED: Salmonella phage KPN6 genomic sequence) position: , mismatch: 9, identity: 0.769

gaaaaccacatcggtgaggtcgacgtcgatgcg-gttgcg	CRISPR spacer
ggtatccacatcggcgaggccgacgtcgatgcgaactac-	Protospacer
*. * *********.****.************* ..*.* 

115. spacer 3.94|1841951|39|NZ_CP011546|CRT matches to JN871591 (Salmonella phage SPN19, complete genome) position: , mismatch: 9, identity: 0.769

gaaaaccacatcggtgaggtcgacgtcgatgcg-gttgcg	CRISPR spacer
ggtatccacatcggcgaggccgacgtcgatgcgaactac-	Protospacer
*. * *********.****.************* ..*.* 

116. spacer 3.100|1839583|35|NZ_CP011546|PILER-CR matches to NC_008697 (Nocardioides sp. JS614 plasmid pNOCA01, complete sequence) position: , mismatch: 9, identity: 0.743

accgtggctcggcaccttcaccgacggcgaggagg	CRISPR spacer
ggtgccgatcggcaccttcaacgagggcgaggatg	Protospacer
. .*. * ************ *** ******** *

117. spacer 3.105|1839887|34|NZ_CP011546|PILER-CR matches to NZ_CP030354 (Novosphingobium sp. P6W plasmid pP6W1, complete sequence) position: , mismatch: 9, identity: 0.735

cgcccatcggaatctccgggttcaggcgacggcc	CRISPR spacer
agcccatcggaatgtccgcgttcagtagatcggt	Protospacer
 ************ **** ******  **. * .

118. spacer 4.3|1843687|33|NZ_CP011546|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.727

gagtcgctgcccgggatgccgtcgaaaattcgg	CRISPR spacer
gagtcgctgcccgtgatgccgacgacgcccggc	Protospacer
************* ******* *** . .. * 

119. spacer 4.3|1843687|33|NZ_CP011546|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012383 (Streptomyces ambofaciens ATCC 23877 plasmid pSAM1, complete sequence) position: , mismatch: 9, identity: 0.727

gagtcgctgcccgggatgccgtcgaaaattcgg	CRISPR spacer
gagtccctgccggggatgccgtcggcgttcttg	Protospacer
***** ***** ************. . *.. *

120. spacer 4.3|1843687|33|NZ_CP011546|PILER-CR,CRISPRCasFinder,CRT matches to MT498037 (Streptomyces phage Dryad, complete genome) position: , mismatch: 9, identity: 0.727

gagtcgctgcccgggatgccgtcgaaaattcgg	CRISPR spacer
gagtccatgcccgggatgccgtcggcgtcgccg	Protospacer
*****  *****************. . . * *

121. spacer 4.4|1843748|33|NZ_CP011546|PILER-CR,CRISPRCasFinder,CRT matches to AP014044 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C12-MedDCM-OCT-S24-C146, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 9, identity: 0.727

atgagcatggataatggtgcgtcgttggatgtg	CRISPR spacer
caggtgatggattatggtgcgttgttggatgac	Protospacer
  *.  ****** *********.********  

122. spacer 4.4|1843748|33|NZ_CP011546|PILER-CR,CRISPRCasFinder,CRT matches to AP014047 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C12-MedDCM-OCT-S39-C144, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 9, identity: 0.727

atgagcatggataatggtgcgtcgttggatgtg	CRISPR spacer
caggtgatggattatggtgcgttgttggatgac	Protospacer
  *.  ****** *********.********  

123. spacer 4.17|1844541|33|NZ_CP011546|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007794 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence) position: , mismatch: 9, identity: 0.727

gctggaccgccgcccaccacacgccgcaggaat	CRISPR spacer
acgccatcgcctccgaccacacgccgcaggacc	Protospacer
.*   *.**** ** **************** .

124. spacer 3.6|1839463|33|NZ_CP011546|CRISPRCasFinder matches to NZ_CP030772 (Streptomyces sp. YIM 121038 plasmid pSSP121038, complete sequence) position: , mismatch: 10, identity: 0.697

acgttgggtcgcggtgatgattcttcggagttc	CRISPR spacer
ccgtagggtctcggtgatgattcttgtcgtgta	Protospacer
 *** ***** **************   .  * 

125. spacer 3.8|1839585|33|NZ_CP011546|CRISPRCasFinder matches to NZ_CP034186 (Deinococcus sp. S14-83 strain S14-83T plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.697

cgtggctcggcaccttcaccgacggcgaggagg	CRISPR spacer
aactcgtcggcatcctcaccgacggcgaggtgc	Protospacer
 ..   ******.*.*************** * 

126. spacer 3.15|1840010|33|NZ_CP011546|CRISPRCasFinder matches to NZ_CP029830 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.697

gtagacgccgactgcttcggcgagggcgaggag	CRISPR spacer
gggaacgccgacggcttcggcgaaggcggcctc	Protospacer
* ..******** **********.****.    

127. spacer 3.20|1840315|33|NZ_CP011546|CRISPRCasFinder matches to NZ_CP023068 (Ensifer sojae CCBAU 05684 plasmid pSJ05684b, complete sequence) position: , mismatch: 10, identity: 0.697

gccagcatctcgccgacgtggtcaccggggtgg	CRISPR spacer
atcagcctctcgccgccgtggtcaccaatgcca	Protospacer
..**** ******** **********.. *. .

128. spacer 3.26|1840679|33|NZ_CP011546|CRISPRCasFinder matches to LN878149 (Cronobacter phage Dev-CD-23823 complete sequence) position: , mismatch: 10, identity: 0.697

gcgagctggttggtgagggtgacgatagggaac	CRISPR spacer
agcaggtggttggtaagggtgacgataagcctg	Protospacer
.  ** ********.************.*    

129. spacer 3.27|1840740|33|NZ_CP011546|CRISPRCasFinder matches to LN878149 (Cronobacter phage Dev-CD-23823 complete sequence) position: , mismatch: 10, identity: 0.697

gcgagctggttggtgagggtgacgatagggaac	CRISPR spacer
agcaggtggttggtaagggtgacgataagcctg	Protospacer
.  ** ********.************.*    

130. spacer 3.139|1841955|35|NZ_CP011546|PILER-CR matches to MK801735 (Mycobacterium Phage Rachaly, complete genome) position: , mismatch: 10, identity: 0.714

accacatcggtgaggtcgacgtcgatgcggttgcg	CRISPR spacer
accccatcggtgaggtcgaggtcgagatgggcatc	Protospacer
*** *************** ***** ..** ... 

131. spacer 4.2|1843626|33|NZ_CP011546|PILER-CR,CRISPRCasFinder,CRT matches to NC_010627 (Paraburkholderia phymatum STM815 plasmid pBPHY02, complete sequence) position: , mismatch: 10, identity: 0.697

tcatcagtatcgacaaaccagcggccaagaaag	CRISPR spacer
ctctcggtatcgacaaatcagcggccagcgccg	Protospacer
.. **.***********.*********. .  *

132. spacer 4.2|1843626|33|NZ_CP011546|PILER-CR,CRISPRCasFinder,CRT matches to NC_018696 (Paraburkholderia phenoliruptrix BR3459a plasmid pSYMBR3459, complete sequence) position: , mismatch: 10, identity: 0.697

tcatcagtatcgacaaaccagcggccaagaaag	CRISPR spacer
ctctcggtatcgacaaatcagcggccagcgccg	Protospacer
.. **.***********.*********. .  *

133. spacer 4.15|1844419|33|NZ_CP011546|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017563 (Paraburkholderia sprentiae WSM5005 plasmid pl1WSM5005, complete sequence) position: , mismatch: 10, identity: 0.697

gccatagccgcgcgcgaacccggcggggccgag	CRISPR spacer
atgaaagccgcgcgcgaactcggcgaggctcgc	Protospacer
.. * **************.*****.***. . 

134. spacer 4.15|1844419|33|NZ_CP011546|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP006368 (Aureimonas sp. AU20 plasmid pAU20a, complete sequence) position: , mismatch: 11, identity: 0.667

gccatagccgcgcgcgaacccggcggggccgag	CRISPR spacer
aaggctgccgcgcgcgaagccggcggcgcccct	Protospacer
.  .. ************ ******* ***   

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1842237 : 1884517 36 Shigella_phage(40.0%) integrase,protease,transposase attL 1870497:1870523|attR 1878789:1878815
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage