CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP008714	Xanthomonas translucens pv. undulosa strain Xtu 4699 chromosome, complete genome	2 crisprs	DinG,WYL,cas3,DEDDh,csa3,Cas9_archaeal	0	0	5	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP008714_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP008714_1

2517727-2517870

Orphan

Consensus_repeat	Method
CTCGGTGCTCAGACCATGATCGTGCTTCAGCCGCGGCAGCAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP008714_1

>merge|NZ_CP008714|1|2517727-2517870|CRISPRCasFinder
CTCGGTGCTCAGACCATGATCGTGCTTCAGCCGCGGCAGCAGTTCCTCGACCGCTTGCAGCGCCTACTTGCCGCCGTCGTGGCTGGCGATAGCCACCACCTACTCGGTGCTCAGACCATGATCGCGCTTCAGCCGCGGCAGCAG

>NZ_CP008714|1|1|2517727-2517870|CRISPRCasFinder
CTCGGTGCTCAGACCATGATCGTGCTTCAGCCGCGGCAGCAG	TTCCTCGACCGCTTGCAGCGCCTACTTGCCGCCGTCGTGGCTGGCGATAGCCACCACCTA
CTCGGTGCTCAGACCATGATCGCGCTTCAGCCGCGGCAGCAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP008714.1\|WP_003475101.1\|2512769_2513345_+\|glycine-cleavage-system-protein-R	unknown	unknown	gnl\|CDD\|225337
NZ_CP008714.1\|WP_003471589.1\|2522140_2523067_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182948
NZ_CP008714.1\|WP_047324986.1\|2528795_2531444_-\|alanine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234701
NZ_CP008714.1\|WP_003471624.1\|2511152_2511686_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225854
NZ_CP008714.1\|WP_003471584.1\|2528447_2528657_-\|carbon-storage-regulator-CsrA	unknown	unknown	gnl\|CDD\|234973
NZ_CP008714.1\|WP_003471616.1\|2513970_2515371_+\|PhoH-family-protein	unknown	unknown	gnl\|CDD\|224787
NZ_CP008714.1\|WP_003471593.1\|2519465_2520275_+\|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase	unknown	unknown	gnl\|CDD\|180561
NZ_CP008714.1\|WP_003471586.1\|2526950_2527121_+\|CsbD-family-protein	unknown	unknown	gnl\|CDD\|283241
NZ_CP008714.1\|WP_047324984.1\|2521045_2522035_-\|DedA-family-protein/thiosulfate-sulfurtransferase-GlpE	unknown	unknown	gnl\|CDD\|238721
NZ_CP008714.1\|WP_003471610.1\|2516713_2517421_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP008714.1\|WP_003471579.1\|2531550_2532048_-\|recombination-regulator-RecX	unknown	unknown	gnl\|CDD\|234646
NZ_CP008714.1\|WP_003471588.1\|2523228_2523930_+\|pirin-family-protein	unknown	unknown	gnl\|CDD\|380375
NZ_CP008714.1\|WP_047324985.1\|2524224_2526363_+\|glycogen-debranching-protein-GlgX	unknown	unknown	gnl\|CDD\|131155
NZ_CP008714.1\|WP_047324982.1\|2511703_2512612_-\|4-hydroxy-tetrahydrodipicolinate-synthase	unknown	unknown	gnl\|CDD\|235107
NZ_CP008714.1\|WP_141696016.1\|2517441_2517720_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|367468
NZ_CP008714.1\|WP_047324983.1\|2515931_2516600_+\|DUF1275-domain-containing-protein	unknown	unknown	gnl\|CDD\|377734
NZ_CP008714.1\|WP_047324981.1\|2510573_2510897_+\|ferredoxin-family-protein	unknown	unknown	gnl\|CDD\|378771
NZ_CP008714.1\|WP_003471614.1\|2515367_2515862_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP008714.1\|WP_080964778.1\|2518522_2519326_+\|IS4-family-transposase	unknown	unknown	gnl\|CDD\|280446
NZ_CP008714.1\|WP_003471618.1\|2513406_2513886_+\|peroxiredoxin	unknown	unknown	gnl\|CDD\|224146

Protein	Function_ID	Function_description	E-value
NZ_CP008714.1\|WP_003475101.1\|2512769_2513345_+\|glycine-cleavage-system-protein-R	gnl\|CDD\|225337	COG2716, GcvR, Glycine cleavage system regulatory protein [Amino acid transport and metabolism].	1.74065e-74
NZ_CP008714.1\|WP_003471589.1\|2522140_2523067_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|182948	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional.	5.97994e-69
NZ_CP008714.1\|WP_047324986.1\|2528795_2531444_-\|alanine--tRNA-ligase	gnl\|CDD\|234701	PRK00252, alaS, alanyl-tRNA synthetase; Reviewed.	0
NZ_CP008714.1\|WP_003471624.1\|2511152_2511686_-\|hypothetical-protein	gnl\|CDD\|225854	COG3317, NlpB, Uncharacterized lipoprotein [Cell envelope biogenesis, outer membrane].	0.00277
NZ_CP008714.1\|WP_003471584.1\|2528447_2528657_-\|carbon-storage-regulator-CsrA	gnl\|CDD\|234973	PRK01712, PRK01712, carbon storage regulator CsrA.	8.74526e-34
NZ_CP008714.1\|WP_003471616.1\|2513970_2515371_+\|PhoH-family-protein	gnl\|CDD\|224787	COG1875, COG1875, NYN ribonuclease and ATPase of PhoH family domains [General function prediction only].	0
NZ_CP008714.1\|WP_003471593.1\|2519465_2520275_+\|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase	gnl\|CDD\|180561	PRK06427, PRK06427, bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase; Reviewed.	3.66556e-118
NZ_CP008714.1\|WP_047324984.1\|2521045_2522035_-\|DedA-family-protein/thiosulfate-sulfurtransferase-GlpE	gnl\|CDD\|238721	cd01444, GlpE_ST, GlpE sulfurtransferase (ST) and homologs are members of the Rhodanese Homology Domain superfamily. Unlike other rhodanese sulfurtransferases, GlpE is a single domain protein but indications are that it functions as a dimer. The active site contains a catalytically active cysteine.	1.19084e-26
NZ_CP008714.1\|WP_047324981.1\|2510573_2510897_+\|ferredoxin-family-protein	gnl\|CDD\|378771	pfam11953, DUF3470, Domain of unknown function (DUF3470). This presumed domain is functionally uncharacterized. This domain is found in bacteria. This domain is about 50 amino acids in length. This domain is found associated with pfam00037. This domain has a single completely conserved residue N that may be functionally important.	2.89139e-17
NZ_CP008714.1\|WP_003471579.1\|2531550_2532048_-\|recombination-regulator-RecX	gnl\|CDD\|234646	PRK00117, recX, recombination regulator RecX; Reviewed.	1.64084e-46
NZ_CP008714.1\|WP_003471586.1\|2526950_2527121_+\|CsbD-family-protein	gnl\|CDD\|283241	pfam05532, CsbD, CsbD-like. CsbD is a bacterial general stress response protein. It's expression is mediated by sigma-B, an alternative sigma factor. The role of CsbD in stress response is unclear.	1.77569e-08
NZ_CP008714.1\|WP_047324985.1\|2524224_2526363_+\|glycogen-debranching-protein-GlgX	gnl\|CDD\|131155	TIGR02100, Glycogen_operon_protein_GlgX_homolog, glycogen debranching enzyme GlgX. This family consists of the GlgX protein from the E. coli glycogen operon and probable equivalogs from other prokaryotic species. GlgX is not required for glycogen biosynthesis, but instead acts as a debranching enzyme for glycogen catabolism. This model distinguishes GlgX from pullanases and other related proteins that also operate on alpha-1,6-glycosidic linkages. In the wide band between the trusted and noise cutoffs are functionally similar enzymes, mostly from plants, that act similarly but usually are termed isoamylase. [Energy metabolism, Biosynthesis and degradation of polysaccharides].	0
NZ_CP008714.1\|WP_047324982.1\|2511703_2512612_-\|4-hydroxy-tetrahydrodipicolinate-synthase	gnl\|CDD\|235107	PRK03170, PRK03170, dihydrodipicolinate synthase; Provisional.	9.41518e-125
NZ_CP008714.1\|WP_141696016.1\|2517441_2517720_-\|hypothetical-protein	gnl\|CDD\|367468	pfam03377, TAL_effector, TAL effector repeat. The proteins in this family bind to DNA. Each repeat binds to a base pair in a predictable way. The structure shows that each repeat is composed of two alpha helices.	1.47851e-05
NZ_CP008714.1\|WP_047324983.1\|2515931_2516600_+\|DUF1275-domain-containing-protein	gnl\|CDD\|377734	pfam06912, DUF1275, Protein of unknown function (DUF1275). This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although most members have 6 TM regions, and may be putative permeases.	2.56218e-36
NZ_CP008714.1\|WP_003471588.1\|2523228_2523930_+\|pirin-family-protein	gnl\|CDD\|380375	cd02910, cupin_Yhhw_N, Escherichia coli YhhW and YhaK and related proteins, pirin-like bicupin, N-terminal cupin domain. This family includes the N-terminal cupin domains of YhhW and YhaK, Escherichia coli pirin-like proteins with unknown function. YhhW is structurally similar not only to human pirin but also to quercitin 2,3-dioxygenase (quercitinase). Although the function of YhhW is not completely understood, YhhW and its human ortholog have quercitinase activity and are likely to play an important role in transcription and apoptosis. This N-terminal cupin domain of YhhW has a metal coordination site and is thought to have catalytic activity while the C-terminal cupin-like domain has diverged considerably and has closer alignment with C-terminal pirin. YhaK is found in low abundance in the cytosol of E. coli and is strongly up-regulated by nitroso-glutathione (GSNO). There are major structural differences at the N-terminus of YhaK compared with YhhW; YhaK lacks the canonical cupin metal-binding residues of pirins and may be involved in chloride binding and/or sensing of oxidative stress in enterobacteria. YhaK showed no quercetinase and peroxidase activity; however, reduced YhaK was very sensitive to reactive oxygen species (ROS). Proteins in this family belong to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold.	4.89275e-79
NZ_CP008714.1\|WP_080964778.1\|2518522_2519326_+\|IS4-family-transposase	gnl\|CDD\|280446	pfam02281, Dimer_Tnp_Tn5, Transposase Tn5 dimerization domain. Transposons are mobile DNA sequences capable of replication and insertion into the chromosome. Typically transposons code for the transposase enzyme, which catalyzes insertion, found between terminal inverted repeats. Tn5 has a unique method of self- regulation in which a truncated version of the transposase enzyme acts as an inhibitor. The catalytic domain of the Tn5 transposon is found in pfam01609. This domain mediates dimerization in the known structure.	5.65884e-14
NZ_CP008714.1\|WP_003471618.1\|2513406_2513886_+\|peroxiredoxin	gnl\|CDD\|224146	COG1225, Bcp, Peroxiredoxin [Posttranslational modification, protein turnover, chaperones].	9.58844e-69

>NZ_CP008714.1|WP_141696016.1|2517441_2517720_-|hypothetical-protein
MAIASYCGGKQALLAVEALLAELLGYGLSRVQVVSIASQAGGRLALQDVQAQLSDPQPGLLHLAPITWPPWPVSADALRWRRSSTACRARPR
>NZ_CP008714.1|WP_003471610.1|2516713_2517421_-|hypothetical-protein
MPEPTAHNVPDARRVVKVVGFFQCHRAPLHAFNEALTTFKLSRPALLQLLQRVGVAELEAIGGTIPDASQRWERIVRNLGVSRAAAAQAPSEPSSPTLAAALERILEASSTVRSPSPVAQASTSSGRRKRALPDVAADTPPARPSWRRSAGSALASGLQDMLGSLLSWGQRRKRTHFADGLLDPGTPPLEFLRQCGDRNDPLRLQPPAPAAALVADEAFSPLRQEDFDWLMQFLG
>NZ_CP008714.1|WP_047324983.1|2515931_2516600_+|DUF1275-domain-containing-protein
MNVELPRWAWAFAGALACVAGMVNVVGYLGFEHQAVTHLTGTTTLLGAALADGDLRVIGQLLGVVLAFLGGAVLSGIVVQDSRLRLGRRYGVALALEALLLLAAMQAFKQQQLLGALFAASACGLQNAMTTTYSGAVVRTTHLTGMFTDLGIGLGQALRGLPLPRRRIRLSLLIIGGFLFGGVLGAWAYRHVGFDALLAPALLTGLVGTTYTVQAHYRRRER
>NZ_CP008714.1|WP_003471614.1|2515367_2515862_+|hypothetical-protein
MNAANARRLGGAVLALALLGACSTARGPASVPTAIKVGQSWIVTRNSAAAEVLDTCSRDSPARQGGVLSGYWVPTIEQIAQLEARLPQLQPTIAAPASADRQYVGILYRGKHAIYVNAFKPHDDRDVDPSVDAVRVCGGGSGFWGAVFDPVSGTFSEIAVNDAK
>NZ_CP008714.1|WP_003471616.1|2513970_2515371_+|PhoH-family-protein
MTRGKRIYVLDTNVLMHDPTALFKFEEHDVFLPMQVIEELDNAKKGMSEVSRNARQVSRFLNELIEGAGAEQIESGIPLSHPQGIQLKSSGSIGRLYFQIRPVEPGRSFGTVAPDNKILAAVLALREEGPETPVILVSKDINLRIKAAISGLIAEDYENDRALDDFSLLYTGAIELPEDFWQKHNQDLRSWSDKGRTCYEIALANDEDWYPNQYLYLPGDDEVELRVVKVSGERKATLALVDDFRSGQHAVWGITARNREQNFALNALMDPEIDFVTLLGTAGTGKTLLALAAGLAQTMDQQRYREIIMTRATVSVGEDIGFLPGTEEEKMTPWMGALTDNLEVLTHNQEGGAWGRAATNDLLASRIKIRSMNFMRGRTFLSRYLILDEAQNLTPKQMKTLITRAGPGTKIVCLGNVEQIDTPYLTETTSGLTYAVDRFKAWPHSAHVTLRRGERSRLADYASEVL
>NZ_CP008714.1|WP_003471618.1|2513406_2513886_+|peroxiredoxin
MKDGDTLDRTTLALPLALSGGTSATLGDYAGRWLVLYFYPKDSTPGCTTEGIDFNALLPQFEQADAAVLGVSRDSLKSHDNFCAKQGFRFPLVSDADEALCRAFDVIKEKNMYGRQVLGIERSTFLISPSGRLLRSWRKVKVPGHAQAVFDALQAAAQQ
>NZ_CP008714.1|WP_003475101.1|2512769_2513345_+|glycine-cleavage-system-protein-R
MPEAPLTDTTPRPAPTENHLLINAYTTHPESPLLPVTRRIADSGCNLVDARLATVGRDVSVTALATGSWDAVAKLEAMLTRLDREEGMKLVWYRTGAKQAQSNLLPYIVEVIAADKPGILFQLADFFDRQGITIENLQSTRYRAMQTGAEMFSAQVTIGVPANMHIAALRDDFLEFCDHLNLDAIMDPMKF
>NZ_CP008714.1|WP_047324982.1|2511703_2512612_-|4-hydroxy-tetrahydrodipicolinate-synthase
MSLSGIITALATPFQGNGDLDLDAWQRLLKRQLDAGVQGVVVAGSTGEAATLLDEEYDLILREAAQVIGARVPLLAGTGLSGTARTVALTRRAAANGAQYALVVTPPYVRPTQAGLLAHYLQVAEHGGLPVVLYNVPGRTGCDLLSDTVAHLAQHPNIVGIKDASSDPQRIAALLALRSDGFAVLSGDDGSAAQAMLGGYDGLISVASNALPASYRRLCDLARARQAEPAQAWDARLQPFHAFCGIESNPIPVKALLQRAGIGQGLRLPLLPLSAAHHATADRLATDAAALEELSSRETLAA
>NZ_CP008714.1|WP_003471624.1|2511152_2511686_-|hypothetical-protein
MRASVPYVRVLSAAVLATTMVAATSGCSWFHKGKPRGDYALAPEMRPLEVPPDLTAPDTSAAMKVPALASATQRPGASSAPGQAPAASNSGFVVPGARDQVFGQVGDALGGIAGVTIASRAQVLGSYDVAYEGSNFLVRVVAVEAGVYVSAVDPRGMPASGDAPVKLIAALKAKLGH
>NZ_CP008714.1|WP_047324981.1|2510573_2510897_+|ferredoxin-family-protein
MPFVVTENCIKCKYTDCVEVCPVDCFHMGPNFMVIDPDECIDCTLCEPECPANAIYPEDDVPAGQEGFVALNAELAKAWPVLTTRQEPLPDAAEWDGKPNKLPLLLK
>NZ_CP008714.1|WP_080964778.1|2518522_2519326_+|IS4-family-transposase
MRYKHGQAQRYVVRAQSDRGLAQGGQPLFGGLSGEQRWQYEATVEVTQRGGRAARKARVQMCGRRLEVKPPADRGKQAVSLPVNVVLVREPAGSEHEPLNWVLLTSEPVETVKQVKQIVGYYELRWRIEEYHKAWKSGVGVERLRQHSAQNLERMQVITAFVAVRLLQLREQLPSRADKEEVQAALPCDQILGAEEWRVLWLTVKKTAPPLTPPTARWACLAVARLGGFTDTKRTGRPGWVTLWHGWQVLQERVAGFRLATGMTALM
>NZ_CP008714.1|WP_003471593.1|2519465_2520275_+|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase
MSEPTVVSALSIAGTDSGGGAGIQADLKTFAAHRVHGLSAVAALTAQHTRGVAAVHVPPLPFLRAQIDACFADFDIGAVKLGMLANAAVIHLVADALEQYRPPFVVLDPVMVATSGAKLLEDDALDALRHRLLPLATLVTPNAPEAQLLLGRTIENGEDAEHATAALLDAGAQAVLLKGGHLDEGHRVIDRYDDGVSRSEFSHVRLALQAHGTGCTLAAAIAAQLCQGLALPVACEAAIDYVARALQGGYRPGRSEVVVLDHFGAARHA
>NZ_CP008714.1|WP_047324984.1|2521045_2522035_-|DedA-family-protein/thiosulfate-sulfurtransferase-GlpE
MQELIARYGLGLVFVNVLALSLGLPVPALPTLILVGATYAVLHGSAVWSGLLAALSVSIVASLIGDLVWFGAGRRYGNRTLQSLCRLSLSRDTCMKQTERFYTRWGVRVLAVAKFIPGLSMVSVPMAGAMRVRPGQFLRYDALGAALWAGCGLLLGLAFADQVHDVLDWLSLLGTRAVLLLAGLLVLYIGYRAWRRHALLKSMETLRINVDELYALMQGEAVPVLLDIRAPGYRAIEPFAIPGALEVDDRRIDAIVAALPRDRKIVIYCACPNEVSAAVLATRLRQRHYEDVLPLRGGLHAWRAAGYAVIELDGGAAAQVDGVGGKVAA
>NZ_CP008714.1|WP_003471589.1|2522140_2523067_-|LysR-family-transcriptional-regulator
MLMISLDALQIIDAIDRRGSFSAAGKALYKVPSTISYTVAKLEQDLGVQLFERLGPKVALTAAGAELLREGRHLLRAAADLELRVRRVASGWETEFALGLDSLFAPDCLAEDIAAFYAVADRTRLRIVQESLSGTWEALLDRRVDLLLGAAGEGPSGGGYVAEAFGTLAFVFVVAPTHPLAQAAEPLGRSQLAEHRAIAVADSARRLLPRTVGLLFGQDALTVPDMRSKYLLQLAGLGFGFLPEPYARAALACGALLRKQVEEPKPDEVFQLAWRSGEEGAALAWWRTRMRQPGVFEAWLAQLQARLD
>NZ_CP008714.1|WP_003471588.1|2523228_2523930_+|pirin-family-protein
MLQIRTSDSRGRAEHGWLSSRHTFSFGHYHDPRHMGVGPLRVINEDRVQPGQGFGTHAHRDMEILSYVLDGALEHRDSMGNGSVLRYGDVQRMSAGSGVTHSEFNHSVSEPLHFLQIWLLPERAGIAPGYEEKHFTAQTKRGQLRLIAAPQGEDGAVRIHQDARIYAAILDGAERIAYPLASGRGAYVQVIRGALTVNGQALQAGDAAQSVDEAELHFADAQDTEFLLFDLPR
>NZ_CP008714.1|WP_047324985.1|2524224_2526363_+|glycogen-debranching-protein-GlgX
MRHPASAVYATPSRIRQGRPFPRGAMFDGQGTNFALFSAHATRVELCLFDDSGAETRLDLPEYTNEIWHGYLPDVQPGQRYGYRVHGPYAPGEGHRFNPNKLLLDPYAREIEGDLIWADELYGYTVGHPDGDLSFDERDSAPFMPKCVVVKDTYDWGDDARLQTPWSDTLVYETHVRGYTMRHPQVPQELRGTCAGLAQEPVLRYIKELGVSAVELLPVHAYLDDQHLLDKGLRNYWGYNTLGFFAIKSRYLASGQRDEFRDMVKAMHRQGLEVILDVVYNHTAEGSELGPTLSFRGIDNASYYRLAEDKRYYINDTGTGNTLNLSNSRVIQLVNDSLRYWAGEMHVDGFRFDLATILGREPTGFDQRGGFLDACNQDPLLSEVKLIAEPWDCGPGGYQVGHFPPGWSEWNDKFRDNARAFWKGDDGMLAEFATRFTGSADLFDRRGRRPWASLNFITAHDGFTLRDLVSYNDKHNDANGEDNRDGSNNDGSCNYGAEDASDDADILQLRERQSKNLLATLLLAQGTPMLLAGDERAQTQGGNNNTYCQDNKITWLDWDNDPTEGRLTDFVKALSALRKRYPILARGRFLNGQYNEEAGVRDLTWLNPGGTEMEEAHWTEAGARAIGLVLEGKAQTSGVKELANDDTLLIVINAYHEGVNFVLPSAEEALHWKLVLSTDETLQADTMPAGASDFLAPPRSVSVFEYQPPQPG
>NZ_CP008714.1|WP_003471586.1|2526950_2527121_+|CsbD-family-protein
MDKNRTEGAKNQIKGTVKEVVGKVTGNKLKEVEGKLQNGAGKIQSEVGKARDNARS
>NZ_CP008714.1|WP_003471584.1|2528447_2528657_-|carbon-storage-regulator-CsrA
MLILTRRVGETLMIGDSVTVTVLGVKGNQVRIGITAPKDVPVHREEIYQRIQRGDEPTSHGGHDDQSSD
>NZ_CP008714.1|WP_047324986.1|2528795_2531444_-|alanine--tRNA-ligase
MNAPAKFSTSQIRSDFLEFFNGKGHTIVPSAPLVPGNDPTLLFTNSGMVQFKDVFLGAEKRSYVRAADVQRCLRAGGKHNDLDAVGYTARHHTFFEMLGNWSFGDYFKKEAIAWAWELLTQVWKLPAERLLVTVYHTDEQAYELWRDMIGVPPERIVRIGDNKGAPYASDNFWQMADTGPCGPCTEIFYDHGAHIAGGPPGSPDEDGDRFIEIWNLVFMQFDRQSDGTLVPLPAPCVDTGMGLERLAAILQHVHSNYEIDLFQTLIRHASQLTGMADLENKSLRVIADHIRACSFLIVDGVLPSNEGRGYVLRRIIRRALRHGWMLGVRQPFFHKMAATLSDLMGQAYPELPAGLSTVQRALQAEEERFAETLDSGMKIFDEIAARASGSIPGADAFRLYDTYGFPVDLTADIARERGMDVDMAGFESAMERQRETARAAGKFGGGTTLPADLVAQLVPTVFLGYDALQADALKVVALLKDGRPVESIEAGDAAIVLLDRTPFYAESGGQVGDLGQLSADSVLFQVEETQKFAGQFHGHVGQLRSGRLQVGATLSAQVDSDRRGATILNHSATHLLHAALREVLGTHVQQKGSLVAPDRLRFDFSHFQPMSAAELAVIERKVNAQVRANHAVEVHHMGMQEALDFGAMALFGEKYGERVRVLKMGDYSTELCGGTHVARTGDIGLFKITSEGGVSAGVRRIEAVTGQGALDHVAAEEAKLHEAAELVGGSAVDVVEKIRQLGDRHKRLERELEALKAKLASGATADLAAAAVQVAGVKVLAVRLEGFDAKALREAMDRLKQQLGDSVIVLAGASEGKAALVAGVNGSPMGRVKAGELLGHIAGQISGKGGGRPDLAQGGGEDGPALALALKGVPAWVKQHLP
>NZ_CP008714.1|WP_003471579.1|2531550_2532048_-|recombination-regulator-RecX
MGDDEQHAQEPRRRRRQPEQTPLQQALGLLVRREHSRKELTRKLRARGVEPDAAATAVERLAGEGWQDDGRFAELLVRSRANTGYGPLHIRAELGTHGLDSEATATAMAAFDGDWSENARDLVQRRFGAAGPVDLPQRRKAANLLARRGFDGDSIRAATRYEPED

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP008714_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP008714_2

3773498-3773607

Orphan

Consensus_repeat	Method
GTCGCGGCTGAAGCCGCTCCTACAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP008714_2

>merge|NZ_CP008714|2|3773498-3773607|CRISPRCasFinder
GTCGCGGCTGAAGCCGCTCCTACAGTGCACACAGCCAGCATCCCGCTAGCCCTTGTAGGAGCGACAGGCACTACCAGCAACGCCTGTCGCGGCTGAAGCCGCTCCTACAG

>NZ_CP008714|2|2|3773498-3773607|CRISPRCasFinder
GTCGCGGCTGAAGCCGCTCCTACAG	TGCACACAGCCAGCATCCCGCTAGCCCTTGTAGGAGCGACAGGCACTACCAGCAACGCCT
GTCGCGGCTGAAGCCGCTCCTACAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP008714.1\|WP_003472444.1\|3785809_3786643_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|224137
NZ_CP008714.1\|WP_003472488.1\|3759639_3760656_+\|DUF4434-domain-containing-protein	unknown	unknown	gnl\|CDD\|373094
NZ_CP008714.1\|WP_038239341.1\|3774581_3776096_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP008714.1\|WP_003472480.1\|3767353_3769573_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP008714.1\|WP_047325308.1\|3784769_3785507_+\|UTRA-domain-containing-protein	unknown	unknown	gnl\|CDD\|132380
NZ_CP008714.1\|WP_047325301.1\|3762383_3765206_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372547
NZ_CP008714.1\|WP_003472482.1\|3765202_3767347_-\|glycosyl-transferase-family-protein	unknown	unknown	gnl\|CDD\|237974
NZ_CP008714.1\|WP_003472474.1\|3772222_3773404_-\|nicotinate-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|235406
NZ_CP008714.1\|WP_047325303.1\|3773613_3774579_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|381626
NZ_CP008714.1\|WP_003472490.1\|3758737_3759253_-\|peptide-deformylase	unknown	unknown	gnl\|CDD\|237227
NZ_CP008714.1\|WP_148562042.1\|3776043_3777948_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|133049
NZ_CP008714.1\|WP_080964811.1\|3754208_3755123_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|375319
NZ_CP008714.1\|WP_003472446.1\|3784078_3784654_+\|nicotinamide-mononucleotide-transporter	unknown	unknown	gnl\|CDD\|377432
NZ_CP008714.1\|WP_038239817.1\|3769569_3770754_-\|UDP-N-acetylglucosamine-2-epimerase-(non-hydrolyzing)	unknown	unknown	gnl\|CDD\|223458
NZ_CP008714.1\|WP_047325307.1\|3781640_3783803_+\|TonB-dependent-siderophore-receptor	unknown	unknown	gnl\|CDD\|273805
NZ_CP008714.1\|WP_003466217.1\|3756891_3758553_+\|energy-dependent-translational-throttle-protein-EttA	unknown	unknown	gnl\|CDD\|236992
NZ_CP008714.1\|WP_108085159.1\|3755253_3756747_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340879
NZ_CP008714.1\|WP_047325305.1\|3779122_3779968_-\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|224137
NZ_CP008714.1\|WP_047325304.1\|3777983_3778952_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP008714.1\|WP_047325306.1\|3780338_3781487_+\|phosphotransferase	unknown	unknown	gnl\|CDD\|270702

Protein	Function_ID	Function_description	E-value
NZ_CP008714.1\|WP_003472444.1\|3785809_3786643_-\|glycosyltransferase	gnl\|CDD\|224137	COG1216, COG1216, Predicted glycosyltransferases [General function prediction only].	0.00579428
NZ_CP008714.1\|WP_047325301.1\|3762383_3765206_-\|hypothetical-protein	gnl\|CDD\|372547	pfam13283, NfrA_C, Bacteriophage N adsorption protein A C-term. The function of this domain is unknown but it is found at the C-terminus of bacteriophage N4 adsorption protein A, in association with an N-terminal region of TPR repeats.	3.08165e-19
NZ_CP008714.1\|WP_148562042.1\|3776043_3777948_-\|glycosyltransferase	gnl\|CDD\|133049	cd06427, CESA_like_2, CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the elongation of beta-1,2 polyglucose chains of glucan.	4.53488e-161
NZ_CP008714.1\|WP_047325308.1\|3784769_3785507_+\|UTRA-domain-containing-protein	gnl\|CDD\|132380	TIGR03337, phnR, phosphonate utilization transcriptional regulator PhnR. This family of proteins are members of the GntR family (pfam00392) containing an N-terminal helix-turn-helix (HTH) motif. This clade is found adjacent to or inside of operons for the degradation of 2-aminoethylphosphonate (AEP) in Salmonella, Vibrio Aeromonas hydrophila, Hahella chejuensis and Psychromonas ingrahamii. [Regulatory functions, DNA interactions].	1.28883e-71
NZ_CP008714.1\|WP_003472490.1\|3758737_3759253_-\|peptide-deformylase	gnl\|CDD\|237227	PRK12846, PRK12846, peptide deformylase; Reviewed.	1.05094e-80
NZ_CP008714.1\|WP_003472482.1\|3765202_3767347_-\|glycosyl-transferase-family-protein	gnl\|CDD\|237974	PRK15489, nfrB, glycosyl transferase family protein.	0
NZ_CP008714.1\|WP_003472474.1\|3772222_3773404_-\|nicotinate-phosphoribosyltransferase	gnl\|CDD\|235406	PRK05321, PRK05321, nicotinate phosphoribosyltransferase; Provisional.	0
NZ_CP008714.1\|WP_038239817.1\|3769569_3770754_-\|UDP-N-acetylglucosamine-2-epimerase-(non-hydrolyzing)	gnl\|CDD\|223458	COG0381, WecB, UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane].	2.53322e-156
NZ_CP008714.1\|WP_003472446.1\|3784078_3784654_+\|nicotinamide-mononucleotide-transporter	gnl\|CDD\|377432	pfam04973, NMN_transporter, Nicotinamide mononucleotide transporter. Members of this family are integral membrane proteins that are involved in transport of nicotinamide mononucleotide.	2.73541e-51
NZ_CP008714.1\|WP_080964811.1\|3754208_3755123_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|375319	pfam17765, MLTR_LBD, MmyB-like transcription regulator ligand binding domain. This domain is found in a family of actinobacterial transcription factors. The structure shows it has a PAS domain like fold and it is bound to Myristic acid.	3.43865e-40
NZ_CP008714.1\|WP_003472488.1\|3759639_3760656_+\|DUF4434-domain-containing-protein	gnl\|CDD\|373094	pfam14488, DUF4434, Domain of unknown function (DUF4434).	3.96328e-22
NZ_CP008714.1\|WP_047325303.1\|3773613_3774579_-\|hypothetical-protein	gnl\|CDD\|381626	cd19608, GH113_mannanase-like, Glycoside hydrolase family 113 beta-1,4-mannanase and similar proteins. Mannan endo-1,4-beta mannosidase (E.C 3.2.1.78) randomly cleaves (1->4)-beta-D-mannosidic linkages in mannans, galactomannans and glucomannans and is also called beta-1,4-mannanase, endo-1,4-beta-mannanase, endo-beta-1,4-mannase, beta-mannanase B, beta-1, 4-mannan 4-mannanohydrolase, endo-beta-mannanase, beta-D-mannanase, 1,4-beta-D-mannan mannanohydrolase, and 4-beta-D-mannan mannanohydrolase. (1->4)-beta-linked mannans are polysaccharides with a linear polymer backbone of (1->4)-beta-linked mannose units (in plants and fungi) or alternating mannose and glucose/galactose units (glucomannan in plants and fungi, and galactomannan and galactoglucomannan in plants), such as in the hemicellulose fraction of hard- and softwoods. Complete degradation of mannan requires a series of enzymes, including beta-1,4-mannanase. According to the CAZy database beta-1,4-mannanases are grouped into various glycoside hydrolase (GH) families; GH family 113 beta-1,4-mannanases include mostly bacterial and archaeal sequences.	4.3889e-66
NZ_CP008714.1\|WP_047325307.1\|3781640_3783803_+\|TonB-dependent-siderophore-receptor	gnl\|CDD\|273805	TIGR01783, Ferrienterobactin_receptor, TonB-dependent siderophore receptor. This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins].	5.18109e-124
NZ_CP008714.1\|WP_003466217.1\|3756891_3758553_+\|energy-dependent-translational-throttle-protein-EttA	gnl\|CDD\|236992	PRK11819, PRK11819, putative ABC transporter ATP-binding protein; Reviewed.	0
NZ_CP008714.1\|WP_108085159.1\|3755253_3756747_+\|MFS-transporter	gnl\|CDD\|340879	cd17321, MFS_MMR_MDR_like, Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This family is composed of bacterial, fungal, and archaeal multidrug resistance (MDR) transporters including several proteins from Bacilli such as methylenomycin A resistance protein (also called MMR peptide), tetracycline resistance protein (TetB), and lincomycin resistance protein LmrB, as well as fungal proteins such as vacuolar basic amino acid transporters, which are involved in the transport into vacuoles of the basic amino acids histidine, lysine, and arginine in Saccharomyces cerevisiae, and aminotriazole/azole resistance proteins. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, MMR confers resistance to the epoxide antibiotic methylenomycin while TetB resistance to tetracycline by an active tetracycline efflux. MMR-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	9.48663e-35
NZ_CP008714.1\|WP_047325305.1\|3779122_3779968_-\|glycosyltransferase-family-2-protein	gnl\|CDD\|224137	COG1216, COG1216, Predicted glycosyltransferases [General function prediction only].	2.67846e-46
NZ_CP008714.1\|WP_047325306.1\|3780338_3781487_+\|phosphotransferase	gnl\|CDD\|270702	cd05153, HomoserineK_II, Type II Homoserine Kinase. This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a Protein Kinase fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine. The Type II homoserine kinase subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K).	6.572e-22

>NZ_CP008714.1|WP_003472474.1|3772222_3773404_-|nicotinate-phosphoribosyltransferase
MIIDSLLDTDLYKFTMMQAVLHQHPGAQVEYRFKCRTPGIDLAQFLQQISAEIDALCALRFRAEELDYLRGLRFIKPDFADFLGLFHLDRKYLQLQASATVPGEIELSIRGPWLHTILFEVPLLAIVNEVWFRNTGGGDHAEGLRRLQAKIALLRDSSGYGGCAIADYGTRRRYSRAWHGELLPVLQQTLGAQFVGTSNVYFARRYGLTPLGTMAHEYLQAFQALGPRLRDSQAAALESWAREYRGDLGIALSDVVGLDAFLRDFDLYFCKLFDGMRHDSGDPFAWGERVLAHLQRQRVDPRGKVLVFSDGLDIDKVMRLYAHFHGRCMLAFGVGTNLTNDLGPAPLQIVIKMVRCNGQPVAKLSDSPGKNLCDDPAYLAYLRQVFAVAADPG
>NZ_CP008714.1|WP_038239817.1|3769569_3770754_-|UDP-N-acetylglucosamine-2-epimerase-(non-hydrolyzing)
MKVLCVFGTRPEAIKMGPLVRALHAAPGIDSQVCITGQHRAMLDQVMALFAIQPDHDLDVMVADQTLNGLSSRLLAKLDALYAQLQPDRVLVHGDTSTAMTAALAAFHRRIPVGHVEAGLRTGNLQQPWPEEMNRRVIDVVADHLFAPTASARDNLQREHLSGRISVTGNTVIDALQLTVGRLERDAVLRATVDAQFPFLDAQRKLLLVTGHRRESFGDGFANICRALAELAQRQDLQIVYPVHLNPNVQGPVHAQLGGLGNVRLIAPQDYLAFVRLMQRAHVVLTDSGGVQEEAPALGRPVLVMREVTERPEAVRAGVVTLVGTDPARIVAAVAAACDLPARPARFLPHASPYGDGRAAARIVAALRGQSFDSFVPGRAAAVSPLPLFSEAMP
>NZ_CP008714.1|WP_003472480.1|3767353_3769573_-|hypothetical-protein
MTHTRRPTARLPQVLPLALVLATALPPAAAADSVAGQFGEWAGTTTVTRSMTLRELGFKQPLVLSGQESQREIYLPVPAGVATHDAQLQVDARYVRGHTGRSASLLSIDGDPVSARSITDAQGDLSQLIGIDGFARPNGFVRFGVGWWSVVSEYRCADQSAPANVLRLSPESRFSYRFDGRAIDTVAKAWGALPATVRLLVEGRASSVQSYDTAWRVGTALENGGKRVDVVALPAVGAIVDLRGLAIPASLAGIPAYAALSDRSASHRIGSLAEVGALLSLRDGSPLAVDVAVLSDPLRAGVRAALDALGTQVASAAPDAAGAFAAWRKADMAGFEQPVGTASVQVALVGGHPTLLVASGAGAKVAGLLTQQWRAYAQGRALRVSTALLPPADKNVVLLGRLGDLAGTQDIVSRGDRTANFDLGALSSEGRLPSEVVVDVSAAPNPAGQGAVASIFFNDYLLGAKVLDADGKPQRLVATVPSYALAARNQVRISFLRQPARPYCHDPATGYPVSVLPSSHIRLADRSLAADFVGAASQLAGAHEVFVPSSWLQDAPASLTKVIHLAGATGASPMQAVLKVGAANTAIAPTGPYLSFVLAPQGLAQSGAVRDGKLVVSGPGNQVLLDLAGLDRAALVEVVGSGASTGVIYRELGTQGPQIAEPFRLIRGNLALLDANGVVQDFDGQDPTGARMAEQSNPQPLWQQHMVWLVVLVGVIVFMLLAARVVQIRRRRRAAQNGN
>NZ_CP008714.1|WP_003472482.1|3765202_3767347_-|glycosyl-transferase-family-protein
MDSLYWNIHLANYYAFLETAAVVVAVVILISSLDDLFIDAWYWVRELWRSAILKQRSEYRPLTQQDLLQRPEQTLAIMVPAWAEFDVIGQMVENMIDVLDYHDYMVFVGTYPNDAQTIAEVERMRRRYKRMRRIEVPHDGPTSKADCLNWLVLAIFEYEKQNDITFAGVVLHDSEDVLHPMELRFFNYLLPRKDMIQLPVTSLDREWYELVAGVYMDEFAEWHAKDLVVRESVSGMVPSAGVGTCFSRKALLALSQANDNQPFNPDSLTEDYDVGARLAAMGMHSIFARFPVQFRVRRPSWFGWGPVRERTLHMALCVREYFPDNFRASYRQKARWVLGIGLQSWETLGWRGSLATKYLLARDRKGIVTSFVSVFAYLIFLQLLLFWLLKVAGTWATQFPTIFQRGTWQMNVALLTTAALAMRVAQRFYFVNRLYGWEHALMSIPRMVVGNMINFMATARAWRLYLLHLLFGKRMVWDKTMHDFPSAAQLVHTRRRLGELLTTWEAIEPERLAQALRQQEGGRQQPLGRILVAQGWLDDETLAEAIAFQGDLPRAAIDVAYLQAGQFPLSVQACVQWRLLPLPSDTPGEVAVAVSSALSEDEQARLLHDLDASVLRQAIARESEINAGLRLISGESYRVDAVPLLGDLLVELRLIARDQFERVLLGYRPQRDGRIGDHLVKQGVATQAAIAAAVREQHRRASQPYGGIGGALPT
>NZ_CP008714.1|WP_047325301.1|3762383_3765206_-|hypothetical-protein
MRTRLLSSMIALSLLGLGSATAHAQQLPLAGAAYRIAEDAYASYARGDYPQASRQAAEAARLRPDVVRLRLLQIYALQKLGRGDDARAQARRALADGLQDAALPRLAADANAALATRAGGAPTPRATAHPSAAEQAYRLAFALATEAYDAYNNDRMAEAADKAEQAFRQQPPQGAWAVLWVAALEARQQFEQAEAAAAAAIQLGAPNVADLQAKRVALGRQRAVKPAQQGYQALIEQDFATAAGYARQAVAYAPDVASHRLLLMTAQLLDEQLPAAEATADAALDNDSEDTVALVMRAYLRQRQLHSAQANADFDAALRQDWLDPQQQRNVRLLAVDAAIAAGDRARGARLLQPLHADPLAGADETAREQFGQAIAQREKALRSARPAPSLTLATYPAPFQQCRDTPYGTQCELTPADLQGSGSAAQRAYAAYGRRDYQEAIREAQHALQDNPDNGSVQNLLTTVLAAGDRAQRAQARQRLDSALGQRPTDAGLLMQRGYLQQRAGQPAQALDDFRAAEATGKAPPSVVLDQAYASAANGDNAQAVALLRSAIDRADQGALPLDQAQRYTTRSSIANLGRAWGITAAAGYRGARQAASNLGGTAISTPGDSVFSTLEAFWRPAALNNRHGTLEAYARAANTLYDAGGTFESVRAVDPCTGAATEDARARAERLSRSRSSAGWPSTVGAFGVRYAFGRTGLSAGIERRQFLGSGTRSGGVYPDAAATQCRIQRDSNQPQQLNTLARYRLDGNAGGWLSYLTYGFYHGTGVRTDVNQWWTLSGYAQAGYSWDDNRARFSVDRLDASGAAVETLRDSDGRLHRTQAFAAAELRAGRSYRFGAEQTRWVLNPYLVVATDWLDQRSRVSGIDYPLIGEQAFALSDTQRSWSLGAGPGLGVRYWFREDRYNAARSSLDLSVQYRFAFGGGDPQRAKGLFATATLTY
>NZ_CP008714.1|WP_003472488.1|3759639_3760656_+|DUF4434-domain-containing-protein
MHNDRPGSASFSPSRRDLLRLALLAPAALAVGMLPGCAKPPRFDGSFIQPWRSHLDLSAQDWQQHMALAQRLGCRQIVVQWAGLYGGGGDADWTLPDSTLQLIFSTAAAAGLQVRVGLPYHSGWWKALQAPDPATLDAFLALTLDNARAYLQTAPWSRQANFDGWYLPYELEQFHWAQDVRQQRLCGWLAGLCAAASAGTDKVTAISTYFSRLQTSGALPQLWNRILDQVPLRPMVQDGVGVAGLDNLDGVDPLLAALRARQVAFDVVVELFEELPSSAADGSHFQAQTADAARIQQQLAWAQRSGAAGIFAFALDPWLSQDSPRAQALRRQWRIGRQ
>NZ_CP008714.1|WP_003472490.1|3758737_3759253_-|peptide-deformylase
MIRDIIRMGDQRLLRLAQPVDTFGSAELHALVADMFETMDAARGVGLAAPQIAVDLQLMVFGFDSNARYPDAPPVPRTALANVQIEPLSDELEDGWEGCLSIPGLRAVIPRYRQIRYRGLDPDGTAVVCEAEGFHARVVQHEHDHLIGRLYPSRIRDFGKFGFEDVLSYEL
>NZ_CP008714.1|WP_003466217.1|3756891_3758553_+|energy-dependent-translational-throttle-protein-EttA
MSQYIYTMNGVSKTVPPKRQIIKDISLSFFPGAKIGLLGLNGAGKSTVLKIMAGVDTDFSGEARPQPGIKVGYLAQEPELDPAKTVREAVEEGVGEVLQAQAALDRIYEAYAEEGADFDKLAAEQQRLEAILAAGDAHLLEQQLEVAADALRLPPWDAVIGPLSGGEKRRVALCRLLLQKPDMLLLDEPTNHLDAESVEWLEQFLARYAGTVVAVTHDRYFLDNAAEWILELDRGRGIPWKGNYTDWLMQKEERLKQEDNQEKSRQKAIQKELEWSRQNAKGGRTKGKARLARLEELQSVDYQRRNETNEIFIPPGERLGNAVLEFKHVTKKFGERLLIDDLSFLVPSGAIVGIIGPNGAGKSTLFKMIIGKETPDSGEIVLGPTVKLAYVDQSRDKLEGNHNVFQEVSGGLDILNINGVEIQSRAYLGRFNFKGQDQQKLVGSLSGGERGRLHMAKTLLQGGNVLLLDEPSNDLDIETLRALEDALLEFPGNTFVISHDRWFLDRIATHILAFEGDSHVEFFQGNYREYEIDKRRRMGDDAGPKRLRFKALK
>NZ_CP008714.1|WP_108085159.1|3755253_3756747_+|MFS-transporter
MTTSSAPAATPHPLDRLDRQPPACACPDASPPTLGAWGLAILLLGQMLPLIDFSIINVALGSIAHTLHASATALELIVAVYGVAFAVGLAAGGRLGDNLGRRRVFAAGVLLFAVASLLCGLAGSVAALLAGRVLQGLGAALAVPQILATIHVSLRGAAHARALALYGSLGGIAFVIGQVLGGSLVTADIAGSGWRAIFLINLPLCVLALAGLRAVPETRAARRMPPDLAGAGLLGLFLACLLLPLALGPTLHWSAPCLAVLAATVPLLAALARTEAWQERRGRVPLLPPALLRLPSVRFALLLGGVFFACWSGFMFVLALTLQSGAGLSPLQSGNAFIVLGAAYFCSALLSARGVARFGLLPTLLLGCTVQMLGLLALAWTLHAVWPHPGWRALATATALIGAGQAWIVACFYRIGLSQVATEHAGAGSAMLSTVLQAAMGLGPAALGAVYAHARRGGSLAAMQAALGSEWLAMLLLVACTLMYRQRQRRLVRAAAT
>NZ_CP008714.1|WP_080964811.1|3754208_3755123_-|helix-turn-helix-domain-containing-protein
MTDAAGSGAGATHGPALAIERARALGAFLRARRESLDPARLGLPRAGRRRTPGLRREEVAALADVGVTWYTWLEQGRPVRASARVLTAIAGALQCSEVEIGHVLALAGLGDAAPQLPPSCERLTDTGRMLLDQLGPWPAMLQSPRFDILGANAAFERLMGVTLAELPDADRNCVYQAFTNPHWRARLADRDNVLQHMVALLRAAMGEHLGEPAWERLLARYRAASPEFDGLWQQRREVRGVENQRKRFHHPQAGELQLQQVNWWSAPRNGNRLVVYLPADELARAALLQLHAQSAEVAAPVQRR
>NZ_CP008714.1|WP_047325303.1|3773613_3774579_-|hypothetical-protein
MLAGMLLALSAGGCGASPPPAAAPTPWMGANVKVSAQAPWGSDAAQRSLQQLADAGAARALLVAFVWQATPQSDDPVLGSDSSVEQVRAGLRQMRAAGLEPVLKVHLWIPGHWAGEAAPADRAAWFGAYQRALLQLAQVAADERTAALIVGTELRGLQDAPQWPALAAAVRQVYRGPLGYVADGLEQAERFGYWDRFDFVGTSLYPALSAAPAQRLTQMRAAAARVQALGTRSGRPVWVAELGLRSARGSLAAPWESPEQRRAAVDTALQAQVLQDWRRVLGEQRIAGIALWCWYTDPNAGGAHDSDFTVQHKPAQAVLAR
>NZ_CP008714.1|WP_038239341.1|3774581_3776096_-|hypothetical-protein
MASASTWPKSAAPHSTTETPRRPHGVAVFVATAALLALLCQRLLAHGYMSDDAMAQYAKLLLLRDAAGLRTEYLGFLYAQASLYLGLLIGGVPGLSTPLLPYLVDVLAGAALLTLLWRDLAAGLGRAWAWGLCAALVLQPFFLWPTLSGNNQGLGLLVFYLTCRALRHLRGDPEAFAYLRLALCLCLLFFVDERACFLAVAMAPWLGVIAPQGMLRRAPLSFYLVCYLPFLFAVATWMYLNYLFFGDALLFVRDQHSAFRGSYAQAALQPWLQQAMARPWWPPLYLALAGLVTTPLLLLVRRTRLSSTWRCVLVATVTVIGAGTLAAWARFSAQPLDFLALMVVPAALLLGDLRRELRWPALALLLLGAVASGWVIAQTAASTTRDWAAALYAPVAPRHPDEARLGAWLAEARLPTLLDDRAGYTVIVARGDAQGLILPFDPRFKRALDDPRQMPAQVVVADPASQAGVLDSVNRRLPQLWRQGLPGYSLVYRQGSYRVWRRAP
>NZ_CP008714.1|WP_148562042.1|3776043_3777948_-|glycosyltransferase
MPGDPIGPLGSVPEPRGWQAPIGTALVEAGVIDAAQLQEALALQARWRSRLGDVVLAQRGVAALRFYTVLSAHFGLNFVNLLQQPIHPALFEPERLAEYAQRLVLPWRMEEGRLVLAVADPGPETFAWARSVYGPDVRFVGTSKFDIVWGLQQQADAQLTHDALNLLAEHAPEHSAKQVVTRKQVVSLCTVAVLLLLALAIWPVPSLIAINSVVGIAFVATFALKFALAWLGARRRIEIKVTDAEVAALSDEDLPVYTVLVPMYKEPDVLPILANALRRLDYPTSKLDVKLVLEADDTETIEAAKALGLEAFFEIIRVPPSQPKTKPKACNYALQFARGQMLTIYDAEDKPEPDQLKRAVAAFRKSPADVACIQARLNYYNADENWLTRMFTLEYTLWFDFYLPALETLRIPIPLGGTSNHFRLDILRKVRAWDPYNVTEDADLGVRLTQQGYRVSVVNSTTFEEANVSIPNWIRQRSRWLKGYMQTWLVHMRDPVQLYRSVGFRGFWGFQFFVGGTFFTALIAPPMWLIYGIWALTDTHVFNPFFPPALLYLSMLNLLLGNGFLIYMTLLAAFKRHYFRLAPYALTVPLYWLLQSIAAYKGLWQLIHNPFYWEKTTHGISKHMAEERRAALDD
>NZ_CP008714.1|WP_047325304.1|3777983_3778952_-|hypothetical-protein
MNQSYGERARSWSRVCAAPASMASTGGARHRPGRRARTLSRLALGLAALAAGPCCAGAWVQDEGAALVILKASHSDGGAVYNSHGQDQNFPDAGRSRQDQLNLYAEYALSADLTLVGNFYFSKAGYRNDSGYGNQHTTGWADQEVGLRYRLGPDGRDGPWRGALQVLALIPGYSRQDADDRNRPALGQGDDGAELRYSLGRGYRAGSRDGYVDLGAAVRLRGGDSADEARLDISSGLALAPRWMLIGELNVIQSLGNGNGPNPVYASGTPIRGNNYDLTKLQASLLHTLPGGTQLQLGYQQPVAGRNTGGAGGPFVAAWWRF
>NZ_CP008714.1|WP_047325305.1|3779122_3779968_-|glycosyltransferase-family-2-protein
MSEQQMAVVVVTYESGSTIDACLQRLRTAADVAQIRVVDNASRDDTLAIVQRHALEDRRVRFVANPDNPGFASACNQGAAASDAPWLAFVNPDLMVEADTLALLRAQVAALGDALLGVEQVDEHGRADAAVRRRDPDFAAMLRHPLAGSRLALAVDPAQPLQRVDAISGALMLLPRALFDRIGGWDAGYRLHAEDLDLCRRARQAGATVAVCNRLRVLHVRGVSSRKRPWFVEWHKHRGLWRYFRKFEAPARPAPVRAAVWAVIWLHAWVTFARLCWRRPG
>NZ_CP008714.1|WP_047325306.1|3780338_3781487_+|phosphotransferase
MSAHQMHGMSLAPAAADWPPLRADEVDALLRRMALPDAVRALRWHSPRPFSAAAEVDSAAGTLFVKRHHRRLRDARTLGEEHRFIEHLRTRGVPVPELLRTPDGASAVELGDWTYEVQRAATGEDLYRDTASWLPFAGTEHAQAAGRALALLHRGAAGYSAPPRSTALLVANLRLFGHADPLQAVQQDLHGRPALAAWLQRRDWRGDLRRHLLPWHARAWPLLRSPAPPLWTHGDWHASNLLWRGHGAASTVSAVFDFGLADRSFALFDLATAIERNLVPWLQLDAGGRAPAELDQLDTLLHGYAQVLPLDAAQLRLLAALLPIAHTDFALSEIDYFAGITGSEANADIAYRRYLLGHADWFGGDEGQRLLRQLQRHADAVR
>NZ_CP008714.1|WP_047325307.1|3781640_3783803_+|TonB-dependent-siderophore-receptor
MPHPFPALAPLALALALAATAAPARANAADPQTPVELDAVNVQGEQPRHRSALGGYGDAALLDTPASIEVIDRAQLDDRQVRVLSEVLRADAAVGDSYAPIGYYENFVVRGYSLNAANSYRINGLTVTGEQNVALENKQQVQVLKGLSGLQSGLTEPAGVIDYITKRPQQVRTLVLGTDDDGGRYAALDLGDWFGRERQFGLRVNAAHEDIRSYVAHADGRRNFLSLAADWNIDAQSSLQLDVEDQDRQQRSVPGYQLLGGERVPGDVSVHRLLAYQPWSRPVGIDALNAQLRYQYRFNDAWRAQLAAAHSRAVIDDYSSFAWGCYGAASCASDAIPNHFSREGDYDLYDYRSPDDTRRNDQVQASVSGTFATGALQHQLNAGLDELHRTIDQHGAINALIGSGNIAADPPLLAQADAELGPRRRRLDSTQQSLLVSDRIGIGEAWQLLLGARQVRYDERAWDRDGALARHTRRSELMPQAALLFKPHDTLSLYASFAKGLAPGGTASWFASNADAILAPTSAYQTEAGLKYERDGLALGAAVFDMRQAYQYAQPQADGSFLYLQQGRLHNRGIELSADGTVGARLHLQASVAGLRARAEDTGTPAYEGHQALNVPRLRASAQASWDVPGASGLALLGGAQYSGAKYADRSGRVAVGGYTVYNVGARYATRLGTLPTTLRLSVDNLTDKRYWRDVGEYLGDDYLFLGAPRTARLALQFDF
>NZ_CP008714.1|WP_003472446.1|3784078_3784654_+|nicotinamide-mononucleotide-transporter
MSPLELLAVLVNILGVWLTARRVRWCWPVNVVAVLLYAWLFYQWKLYSDMLLQGVYVVLQGYGWWRWSQGRLDHGKVQVGPLPRREGVLSLLAGAAGALSLGWLMHRHTDAALPWLDAALSAFSLVASVWAARKRIANWTLWIVLDSLYVGVFVYKGLYPTAALYAGFVLLAIYGLRLWQAEQRGVAVAAP
>NZ_CP008714.1|WP_047325308.1|3784769_3785507_+|UTRA-domain-containing-protein
MPTPLNPATGFGQRIVDALLARIVGGEWAADQRLPVERELATLFGCTRITLREALQQLESEGYLYRENRRGWFVSAPRVRHDPTSIAGFMQYVAAQGGTPRTELLSARRQPAGATLARQLELDEAEAEVFVLQRRRWIGRRAVLLETNAILAAWAPTLLDHDLAGSLSTVLGQRLGLHLARSRLSMYPATLVAEQAALLQSTAGTPCFRLQRVSYAADGRAVEFDSESWRHDVLEVTVEVQAPPQ
>NZ_CP008714.1|WP_003472444.1|3785809_3786643_-|glycosyltransferase
MTLPIVLLPVGVDDVALDACLGALEAQTPAGTRVWLADDAQAGPRGIRVIEAWLARTRLQADYTRRPRMLGEVAHLDEMLRACGAADVVVLAADAQPLPGWLQHLSACLARDAAIASATPWSNAGEACAWPRLGEINPLPDDGERLARACAALPPEHPELPSAVCHAVALRGAPRQRAGGLDASSYGSWYAALIDLSLRMAGLGWRNVLCETAYVGCSGEGRAADGDMDALATRWPAWHARLAGFLMHDPLHARREQLQRLYADLPPPDPQRALFDA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

695743 : 766127

Roseobacter_phage(16.67%)

transposase,protease

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_038237773.1\|695743_696670_-\|transposase	IS110 family transposase	Q75QL1	Wolbachia_phage	4.3e-24	32.3
WP_003465893.1\|697125_697509_+	YbaN family protein	NA	NA	NA	NA
WP_003465890.1\|697593_697845_+	lipoprotein	NA	NA	NA	NA
WP_003465888.1\|697837_698692_+	diaminopimelate epimerase	NA	NA	NA	NA
WP_003465885.1\|698688_699360_+	DUF484 family protein	NA	NA	NA	NA
WP_173427114.1\|699470_700325_+	tyrosine recombinase XerC	A0A166YH27	Gordonia_phage	1.3e-14	33.8
WP_003465879.1\|700392_700944_+\|protease	ATP-dependent protease subunit HslV	NA	NA	NA	NA
WP_047324534.1\|701058_702423_+\|protease	ATP-dependent protease ATPase subunit HslU	A0A173GFL6	Erwinia_phage	3.7e-40	27.7
WP_047324535.1\|702661_704026_-	DUF2252 family protein	NA	NA	NA	NA
WP_003465869.1\|704130_705309_-	DUF1624 domain-containing protein	NA	NA	NA	NA
WP_047324536.1\|705368_707558_+	TonB-dependent receptor	NA	NA	NA	NA
WP_003465861.1\|707587_708043_-	nucleoside deaminase	NA	NA	NA	NA
WP_003465858.1\|708165_708927_+	bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE	NA	NA	NA	NA
WP_047324537.1\|709117_711055_+	M1 family metallopeptidase	NA	NA	NA	NA
WP_047324538.1\|711187_712177_+	alpha/beta hydrolase	R4JP33	Mycobacterium_phage	8.0e-08	38.1
WP_047324539.1\|712173_712893_+	hypothetical protein	NA	NA	NA	NA
WP_047324540.1\|712883_713510_+	HAD family hydrolase	NA	NA	NA	NA
WP_003465839.1\|716008_716941_-	carbohydrate kinase family protein	NA	NA	NA	NA
WP_003465837.1\|717202_718249_+	rod shape-determining protein	F2Y0P3	Organic_Lake_phycodnavirus	1.6e-06	21.2
WP_047324541.1\|718419_719445_+	rod shape-determining protein MreC	NA	NA	NA	NA
WP_003465834.1\|719441_719930_+	rod shape-determining protein MreD	NA	NA	NA	NA
WP_080964743.1\|719931_722004_+	penicillin-binding protein 2	NA	NA	NA	NA
WP_003465831.1\|722000_723119_+	rod shape-determining protein RodA	NA	NA	NA	NA
WP_003465829.1\|723448_724786_+	virulence factor family protein	NA	NA	NA	NA
WP_003465827.1\|724782_726192_+	endopolygalacturonase	NA	NA	NA	NA
WP_047324542.1\|726633_727770_+	lytic murein transglycosylase B	NA	NA	NA	NA
WP_047324543.1\|727766_729266_+	septal ring lytic transglycosylase RlpA family protein	F5B3X9	Synechococcus_phage	2.1e-15	49.4
WP_003465820.1\|729461_730673_+	D-alanyl-D-alanine carboxypeptidase	B6DZZ7	Stx2-converting_phage	3.2e-67	41.5
WP_047324544.1\|731437_732400_-\|transposase	IS1595 family transposase	NA	NA	NA	NA
WP_047325537.1\|732752_732983_+	hypothetical protein	NA	NA	NA	NA
WP_003472345.1\|733032_734091_-	lipid A deacylase LpxR family protein	NA	NA	NA	NA
WP_003472346.1\|734366_734645_+	DUF493 family protein	NA	NA	NA	NA
WP_080627716.1\|734683_735346_+	lipoyl(octanoyl) transferase LipB	NA	NA	NA	NA
WP_003472348.1\|735368_736379_+	lipoyl synthase	NA	NA	NA	NA
WP_047324546.1\|736619_738797_+	carboxy terminal-processing peptidase	A0A0R6PIZ1	Moraxella_phage	9.1e-81	31.8
WP_038232590.1\|739111_739855_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA
WP_047324547.1\|739940_740864_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_047324548.1\|740891_741770_-	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA
WP_003473577.1\|742039_743095_+	bifunctional nicotinamide-nucleotide adenylyltransferase/Nudix hydroxylase	A0A1B0V161	Roseobacter_phage	1.3e-77	45.0
WP_003473576.1\|743159_744584_+	nicotinate phosphoribosyltransferase	A0A1B0V392	Roseobacter_phage	1.8e-130	53.1
WP_047324549.1\|744731_745694_-\|transposase	IS1595 family transposase	NA	NA	NA	NA
WP_047325538.1\|746300_746996_+	DUF2242 domain-containing protein	NA	NA	NA	NA
WP_003469458.1\|747138_747507_+	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA
WP_003469460.1\|747765_748107_-	PilZ domain-containing protein	NA	NA	NA	NA
WP_047324550.1\|748103_750608_-	DUF1631 domain-containing protein	NA	NA	NA	NA
WP_003470791.1\|750691_751849_-	radical SAM family heme chaperone HemW	NA	NA	NA	NA
WP_003470792.1\|751952_752543_-	RdgB/HAM1 family non-canonical purine NTP pyrophosphatase	NA	NA	NA	NA
WP_003470803.1\|752589_753315_-	ribonuclease PH	NA	NA	NA	NA
WP_003470806.1\|753415_754276_+	YicC family protein	NA	NA	NA	NA
WP_003470809.1\|754386_755013_+	guanylate kinase	A0A218KC48	Bacillus_phage	1.8e-10	30.9
WP_003470812.1\|755125_755425_+	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA
WP_003470815.1\|755525_757697_+	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	A0A2I2L310	Orpheovirus	3.6e-13	39.6
WP_047324551.1\|757949_758264_-	hypothetical protein	NA	NA	NA	NA
WP_047324552.1\|759410_759794_+	RidA family protein	NA	NA	NA	NA
WP_047324553.1\|759803_761960_+	ATP-dependent DNA helicase RecG	NA	NA	NA	NA
WP_047324554.1\|762461_763400_+	nucleoside hydrolase	NA	NA	NA	NA
WP_003471989.1\|763562_763805_+	type B 50S ribosomal protein L31	NA	NA	NA	NA
WP_003477356.1\|764095_765385_+	citrate synthase	NA	NA	NA	NA
WP_047324555.1\|765833_766127_+\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_2

1408601 : 1461512

Vibrio_phage(16.67%)

plate,protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003467094.1\|1408601_1410668_-\|tRNA	methionine--tRNA ligase	NA	NA	NA	NA
WP_158506390.1\|1410666_1410846_+	hypothetical protein	NA	NA	NA	NA
WP_003467096.1\|1410930_1411383_-	DUF2147 domain-containing protein	NA	NA	NA	NA
WP_003467098.1\|1411636_1412032_-	VOC family protein	NA	NA	NA	NA
WP_003467100.1\|1412028_1412394_-	VOC family protein	NA	NA	NA	NA
WP_173427094.1\|1412570_1414016_+	S-methylmethionine permease	NA	NA	NA	NA
WP_047324715.1\|1414005_1414959_+	homocysteine S-methyltransferase	NA	NA	NA	NA
WP_047324716.1\|1415126_1417004_-	DUF885 family protein	NA	NA	NA	NA
WP_087960485.1\|1417297_1418080_-	queuosine precursor transporter	NA	NA	NA	NA
WP_003467120.1\|1418076_1418754_-	DUF502 domain-containing protein	A0A2I7S9X1	Vibrio_phage	3.5e-07	26.4
WP_108085092.1\|1418758_1418905_-	hypothetical protein	NA	NA	NA	NA
WP_003467122.1\|1418923_1419373_-	DUF4442 domain-containing protein	NA	NA	NA	NA
WP_047324717.1\|1419520_1420384_-	thioredoxin	A0A1J0GW78	Streptomyces_phage	1.0e-11	41.2
WP_047325567.1\|1420583_1421207_+	DUF998 domain-containing protein	NA	NA	NA	NA
WP_047324718.1\|1421465_1424108_+\|tRNA	leucine--tRNA ligase	A0A2H4PQS0	Staphylococcus_phage	1.1e-173	41.0
WP_003470922.1\|1424259_1424862_+	hypothetical protein	NA	NA	NA	NA
WP_003470923.1\|1424945_1425980_+	DNA polymerase III subunit delta	NA	NA	NA	NA
WP_080964752.1\|1425976_1426816_+	nicotinate-nucleotide adenylyltransferase	NA	NA	NA	NA
WP_003470927.1\|1426871_1427294_+	ribosome silencing factor	NA	NA	NA	NA
WP_047324719.1\|1427286_1428450_+	J domain-containing protein	NA	NA	NA	NA
WP_047324720.1\|1428472_1428943_+	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	NA	NA	NA	NA
WP_047324721.1\|1429120_1431886_-	TonB-dependent receptor	A0A0P0I887	Acinetobacter_phage	3.6e-50	26.9
WP_047324722.1\|1432051_1432720_-	energy transducer TonB	NA	NA	NA	NA
WP_003470935.1\|1432957_1433695_-	SIMPL domain-containing protein	NA	NA	NA	NA
WP_003470936.1\|1433828_1434395_+	septum formation inhibitor Maf	NA	NA	NA	NA
WP_003470937.1\|1434394_1435885_+	ribonuclease G	NA	NA	NA	NA
WP_047324723.1\|1436019_1439913_+	TIGR02099 family protein	NA	NA	NA	NA
WP_003467665.1\|1439977_1441420_+\|protease	metalloprotease TldD	NA	NA	NA	NA
WP_047324724.1\|1441585_1442188_-	ribosome-associated protein	NA	NA	NA	NA
WP_047324725.1\|1442253_1443618_+\|protease	metalloprotease PmbA	NA	NA	NA	NA
WP_047324726.1\|1443895_1444273_+	DUF4870 domain-containing protein	NA	NA	NA	NA
WP_003467682.1\|1444706_1445213_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_003467685.1\|1445223_1446723_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_003467690.1\|1446828_1447332_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_003467692.1\|1447369_1448212_+	ImpE protein	NA	NA	NA	NA
WP_003467697.1\|1448199_1448703_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_047324727.1\|1448702_1450580_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_047324728.1\|1450543_1451557_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_047324729.1\|1451584_1454326_+	type VI secretion system ATPase TssH	H6X3M6	Enterobacteria_phage	2.2e-76	29.4
WP_047324730.1\|1454329_1454785_+	hypothetical protein	NA	NA	NA	NA
WP_148561993.1\|1454964_1455492_+	hypothetical protein	NA	NA	NA	NA
WP_047324732.1\|1455546_1455999_+	hypothetical protein	NA	NA	NA	NA
WP_047324733.1\|1456337_1458272_+	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	3.1e-40	28.9
WP_003467705.1\|1458280_1458820_+	hypothetical protein	NA	NA	NA	NA
WP_003467706.1\|1458816_1460178_+	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA
WP_003467707.1\|1460174_1461512_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA

DBSCAN-SWA_3

2292336 : 2363287

Shigella_phage(15.38%)

transposase,protease,integrase,tRNA

attL 2288377:2288394|attR 2303014:2303031

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2288377:2288394	attL	NA	NA	NA	NA
WP_148562001.1\|2292336_2293471_+\|transposase	IS3 family transposase	U5P429	Shigella_phage	1.7e-94	63.5
WP_058358319.1\|2293671_2294391_+	hypothetical protein	NA	NA	NA	NA
WP_080964774.1\|2294776_2296150_+	FRG domain-containing protein	NA	NA	NA	NA
WP_047324922.1\|2296483_2298418_-	UvrD-helicase domain-containing protein	NA	NA	NA	NA
WP_047324923.1\|2298414_2300445_-	AAA family ATPase	NA	NA	NA	NA
WP_047324924.1\|2300532_2301621_-\|integrase	site-specific integrase	NA	NA	NA	NA
WP_080964775.1\|2301725_2302670_+	DNA-binding protein	NA	NA	NA	NA
WP_080627710.1\|2303035_2303431_+	hypothetical protein	NA	NA	NA	NA
2303014:2303031	attR	NA	NA	NA	NA
WP_047324926.1\|2303536_2305267_-	single-stranded-DNA-specific exonuclease RecJ	A7KV88	Bacillus_phage	4.0e-39	28.8
WP_003472164.1\|2305263_2306184_-	hypothetical protein	NA	NA	NA	NA
WP_170874001.1\|2306188_2306653_-	transcription elongation factor GreA	NA	NA	NA	NA
WP_003472160.1\|2306661_2309904_-	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA
WP_038239542.1\|2309905_2310310_-	four helix bundle protein	NA	NA	NA	NA
WP_047324927.1\|2310306_2311461_-	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	NA	NA	NA	NA
WP_080964776.1\|2311622_2312339_-	4-hydroxy-tetrahydrodipicolinate reductase	NA	NA	NA	NA
WP_003471896.1\|2312650_2313361_-	MOSC domain-containing protein	NA	NA	NA	NA
WP_047324929.1\|2313383_2314592_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA
WP_148562002.1\|2314982_2316153_+\|transposase	IS3 family transposase	U5P429	Shigella_phage	1.7e-89	60.9
WP_004425749.1\|2317169_2318276_-	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_003474849.1\|2318272_2319397_-	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_047324931.1\|2319423_2320533_-	cobalamin B12-binding domain-containing protein	NA	NA	NA	NA
WP_004425745.1\|2320556_2321255_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_047324932.1\|2321251_2322484_-	amidohydrolase family protein	NA	NA	NA	NA
WP_047325607.1\|2322487_2323336_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_004425740.1\|2323471_2324329_-	hypothetical protein	NA	NA	NA	NA
WP_004425738.1\|2324325_2325513_-	hypothetical protein	NA	NA	NA	NA
WP_047324933.1\|2325509_2326451_-	glycosyltransferase	A0A1V0SAH6	Catovirus	3.4e-08	30.6
WP_004425734.1\|2326450_2327704_-	O-antigen translocase	NA	NA	NA	NA
WP_004425732.1\|2327700_2328816_-	DegT/DnrJ/EryC1/StrS family aminotransferase	A0A2P1ELT3	Moumouvirus	1.8e-24	33.7
WP_004425730.1\|2328812_2329748_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_004425729.1\|2329734_2330694_-	hypothetical protein	NA	NA	NA	NA
WP_004425727.1\|2330698_2331364_-	acetyltransferase	NA	NA	NA	NA
WP_004425725.1\|2331368_2331785_-	WxcM-like domain-containing protein	NA	NA	NA	NA
WP_004425723.1\|2332133_2332643_+	cytochrome b	A0A0U2QLA7	Escherichia_phage	2.7e-07	34.7
WP_004425721.1\|2332703_2334065_+	hypothetical protein	NA	NA	NA	NA
WP_047324934.1\|2334094_2334493_+	c-type cytochrome	NA	NA	NA	NA
WP_053008586.1\|2334784_2335582_+	hypothetical protein	NA	NA	NA	NA
WP_003474879.1\|2335646_2336231_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_004425713.1\|2336227_2336866_+	hypothetical protein	NA	NA	NA	NA
WP_047324935.1\|2336862_2338194_+	S8 family serine peptidase	A0A217EQY2	Bacillus_phage	2.0e-22	38.6
WP_047325609.1\|2338205_2339012_+	heme ABC transporter permease	NA	NA	NA	NA
WP_047324936.1\|2339008_2339224_+	heme exporter protein CcmD	NA	NA	NA	NA
WP_047324937.1\|2339207_2339684_+	cytochrome c maturation protein CcmE	NA	NA	NA	NA
WP_047324938.1\|2339742_2341728_+	heme lyase CcmF/NrfE family subunit	NA	NA	NA	NA
WP_004427191.1\|2341724_2342267_+	DsbE family thiol:disulfide interchange protein	NA	NA	NA	NA
WP_004425700.1\|2342263_2342746_+	cytochrome c-type biogenesis protein CcmH	NA	NA	NA	NA
WP_004425698.1\|2342739_2343396_+	hypothetical protein	NA	NA	NA	NA
WP_038236944.1\|2343622_2344210_+\|protease	aspartyl protease family protein	NA	NA	NA	NA
WP_047324939.1\|2344317_2345685_-	voltage-gated chloride channel family protein	A0A1X9I5Z9	Streptococcus_phage	5.4e-39	33.0
WP_004425692.1\|2345972_2347340_-	replication-associated recombination protein A	G3MBE0	Bacillus_virus	1.9e-76	38.7
WP_171815510.1\|2347592_2351759_+	type III effector	NA	NA	NA	NA
WP_047324940.1\|2351822_2352449_-	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA
WP_047325610.1\|2352522_2354322_-	DUF3857 domain-containing transglutaminase family protein	NA	NA	NA	NA
WP_047324941.1\|2354564_2356922_-	DNA translocase FtsK	G1D482	Mycobacterium_virus	2.3e-85	46.4
WP_004425683.1\|2357209_2358178_+	thioredoxin-disulfide reductase	A0A2I2L5E1	Orpheovirus	1.3e-63	43.6
WP_004425681.1\|2358232_2359354_+	N-acetyltransferase	NA	NA	NA	NA
WP_004425679.1\|2359383_2360121_+\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
WP_004425677.1\|2360217_2360436_+	translation initiation factor IF-1	NA	NA	NA	NA
WP_004425670.1\|2360560_2362843_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	6.2e-173	44.2
WP_004425668.1\|2362966_2363287_-\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	1.0e-12	45.1

DBSCAN-SWA_4

3120956 : 3199527

uncultured_Caudovirales_phage(22.22%)

transposase,plate,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003466943.1\|3120956_3122552_+\|holin	choline dehydrogenase	A0A1V0S9J5	Catovirus	1.1e-51	30.8
WP_047325131.1\|3122586_3123483_-	DMT family transporter	NA	NA	NA	NA
WP_170873927.1\|3123800_3125153_+	serine hydrolase	NA	NA	NA	NA
WP_047325132.1\|3125911_3126385_-	hypothetical protein	NA	NA	NA	NA
WP_139115840.1\|3126723_3127047_-	hypothetical protein	NA	NA	NA	NA
WP_155522280.1\|3127359_3127509_-	hypothetical protein	NA	NA	NA	NA
WP_003466930.1\|3127690_3128086_-	glycine cleavage system protein GcvH	NA	NA	NA	NA
WP_003466929.1\|3128198_3129305_-	glycine cleavage system aminomethyltransferase GcvT	NA	NA	NA	NA
WP_155601488.1\|3129361_3129505_+	hypothetical protein	NA	NA	NA	NA
WP_003472763.1\|3129728_3130160_-	NfeD family protein	NA	NA	NA	NA
WP_003472760.1\|3130163_3131132_-	SPFH/Band 7/PHB domain protein	J3IZE5	Acanthamoeba_polyphaga_lentillevirus	4.3e-22	33.3
WP_155601480.1\|3131241_3131409_-	hypothetical protein	NA	NA	NA	NA
WP_003472758.1\|3131475_3131799_-	YnfA family protein	A0A218MNG8	uncultured_virus	3.6e-26	55.9
WP_080627721.1\|3131795_3132725_-	nucleoside triphosphate pyrophosphohydrolase	NA	NA	NA	NA
WP_003472753.1\|3132850_3133651_-	3'(2'),5'-bisphosphate nucleotidase CysQ	NA	NA	NA	NA
WP_003472750.1\|3133647_3134202_-	ADP compounds hydrolase NudE	NA	NA	NA	NA
WP_038240012.1\|3134276_3135668_+	adenosylmethionine--8-amino-7-oxononanoate transaminase	A0A1V0SKB7	Klosneuvirus	5.9e-09	23.4
WP_047325134.1\|3135658_3136390_+	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA
WP_047325135.1\|3136879_3139486_+	TonB-dependent receptor	NA	NA	NA	NA
WP_003472212.1\|3139851_3140874_-	glucokinase	NA	NA	NA	NA
WP_155601453.1\|3141040_3141205_+	hypothetical protein	NA	NA	NA	NA
WP_047325136.1\|3141671_3144377_+	TonB-dependent receptor	NA	NA	NA	NA
WP_080627711.1\|3144483_3146178_+	alpha-L-fucosidase	NA	NA	NA	NA
WP_003472206.1\|3146191_3147247_+	glycoside hydrolase family 18	A0A2P1CFB9	Microbacterium_phage	7.7e-09	23.8
WP_173427120.1\|3147389_3149792_+	family 20 glycosylhydrolase	NA	NA	NA	NA
WP_047325138.1\|3149809_3152509_+	glycoside hydrolase family 2 protein	NA	NA	NA	NA
WP_148562013.1\|3152550_3155238_+	glycoside hydrolase family 3 C-terminal domain-containing protein	NA	NA	NA	NA
WP_047325139.1\|3155586_3158274_+	glycoside hydrolase family 2 protein	NA	NA	NA	NA
WP_047325140.1\|3158273_3158468_+	hypothetical protein	NA	NA	NA	NA
WP_003471177.1\|3158599_3160057_+	glycoside hydrolase family 125 protein	NA	NA	NA	NA
WP_003471175.1\|3160165_3162508_+	glycoside hydrolase family 92 protein	NA	NA	NA	NA
WP_047325141.1\|3162632_3164480_+	beta-galactosidase	NA	NA	NA	NA
WP_047325142.1\|3164811_3165399_+	hypothetical protein	NA	NA	NA	NA
WP_047325143.1\|3165395_3166364_+	DUF4868 domain-containing protein	NA	NA	NA	NA
WP_047325144.1\|3166455_3167400_+	5'-nucleotidase	NA	NA	NA	NA
WP_047325145.1\|3167838_3168231_+	type I toxin-antitoxin system SymE family toxin	NA	NA	NA	NA
WP_053008596.1\|3168269_3168503_+	hypothetical protein	NA	NA	NA	NA
WP_141696173.1\|3168530_3168740_-	hypothetical protein	NA	NA	NA	NA
WP_080627695.1\|3168738_3169452_+	hypothetical protein	NA	NA	NA	NA
WP_108084761.1\|3169593_3170726_-\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	2.2e-54	44.5
WP_047325146.1\|3172147_3173170_-	hypothetical protein	NA	NA	NA	NA
WP_047325147.1\|3173174_3176042_-	hypothetical protein	NA	NA	NA	NA
WP_038239077.1\|3176061_3176907_-	hypothetical protein	NA	NA	NA	NA
WP_053008597.1\|3176908_3179455_-	type VI secretion system tip protein VgrG	A0A2H4JCD4	uncultured_Caudovirales_phage	2.5e-37	27.9
WP_141697082.1\|3179651_3180704_-	hypothetical protein	NA	NA	NA	NA
WP_139116097.1\|3180707_3183425_-	hypothetical protein	NA	NA	NA	NA
WP_139116098.1\|3183417_3184227_-	DUF4123 domain-containing protein	NA	NA	NA	NA
WP_047325148.1\|3184275_3187041_-	type VI secretion system tip protein VgrG	A0A2H4JCD4	uncultured_Caudovirales_phage	3.1e-41	27.9
WP_029996228.1\|3187133_3187487_-	hypothetical protein	NA	NA	NA	NA
WP_047325149.1\|3187518_3190260_-	type VI secretion system ATPase TssH	A0A223W0B1	Agrobacterium_phage	2.7e-90	29.8
WP_047325150.1\|3190345_3191437_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_003467617.1\|3191400_3193236_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_019302186.1\|3193238_3193727_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_003467612.1\|3193874_3194372_-	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_003467606.1\|3194513_3196010_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_003467601.1\|3196013_3196514_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_170874018.1\|3196559_3197174_-	hypothetical protein	NA	NA	NA	NA
WP_038237263.1\|3197432_3198044_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_038237260.1\|3198192_3199527_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA

DBSCAN-SWA_5

3844289 : 3850634

Escherichia_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003466794.1\|3844289_3845636_+	phosphoglucomutase/phosphomannomutase	A0A127AWJ1	Bacillus_phage	1.1e-31	27.5
WP_003466793.1\|3845685_3847089_+	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	A0A1V0SH58	Hokovirus	1.7e-48	29.3
WP_003466792.1\|3847168_3848083_-	dTDP-4-dehydrorhamnose reductase	A0A1D7XFA3	Escherichia_phage	1.3e-25	33.2
WP_003466791.1\|3848079_3848637_-	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	1.3e-44	49.4
WP_003466790.1\|3848633_3849521_-	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	1.1e-93	58.5
WP_003466789.1\|3849578_3850634_-	dTDP-glucose 4,6-dehydratase	A0A1D7XFE8	Escherichia_phage	3.1e-74	44.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP008714

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection