CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP011640	Serratia marcescens strain CAV1492 plasmid pCAV1492-73, complete sequence	0 crisprs	NA	0	0	1	0
NZ_CP011637	Serratia marcescens strain CAV1492 plasmid pCAV1492-3223, complete sequence	0 crisprs	NA	0	0	0	0
NZ_CP011641	Serratia marcescens strain CAV1492 plasmid pCAV1492-199, complete sequence	0 crisprs	csa3,RT	0	0	3	0
NZ_CP011642	Serratia marcescens strain CAV1492, complete genome	3 crisprs	DEDDh,cas3,WYL,csa3,DinG,PD-DExK	3	23	8	1
NZ_CP011639	Serratia marcescens strain CAV1492 plasmid pKPC_CAV1492, complete sequence	0 crisprs	NA	0	0	1	0
NZ_CP011638	Serratia marcescens strain CAV1492 plasmid pCAV1492-6393, complete sequence	0 crisprs	NA	0	0	0	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

9635 : 43775

Salmonella_phage(27.27%)

transposase,integrase,protease

attL 39740:39754|attR 46135:46149

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000427623.1\|9635_10640_-\|transposase	IS110-like element IS4321 family transposase	NA	NA	NA	NA
WP_032622532.1\|10718_13685_-\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	0.0e+00	72.8
WP_003124096.1\|13687_14248_-	recombinase family protein	A0A1B0V7I5	Salmonella_phage	2.1e-50	88.6
WP_000993245.1\|14378_14591_-	DUF3330 domain-containing protein	NA	NA	NA	NA
WP_001446012.1\|14553_14673_+	hypothetical protein	NA	NA	NA	NA
WP_001087807.1\|14656_14893_-	broad-spectrum mercury transporter MerE	NA	NA	NA	NA
WP_001277466.1\|14889_15255_-	mercury resistance co-regulator MerD	NA	NA	NA	NA
WP_000209296.1\|15272_16958_-	mercury(II) reductase	A0A2K5B2C5	Erysipelothrix_phage	1.8e-39	29.1
WP_000522996.1\|16996_17422_-	organomercurial transporter MerC	NA	NA	NA	NA
WP_000732275.1\|17449_17725_-	mercury resistance system periplasmic binding protein MerP	NA	NA	NA	NA
WP_001294656.1\|17740_18106_-	mercuric ion transporter MerT	NA	NA	NA	NA
WP_001166628.1\|18177_18633_+	Hg(II)-responsive transcriptional regulator	NA	NA	NA	NA
WP_023279823.1\|20019_20943_-\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	9.6e-173	97.4
WP_032491180.1\|21108_21969_+	class A extended-spectrum beta-lactamase SHV-30	A0A077SL40	Escherichia_phage	1.7e-155	99.3
WP_002210513.1\|21989_22751_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	1.9e-134	100.0
WP_004206881.1\|22858_25756_-\|transposase	Tn3-like element Tn5403 family transposase	A0A1B0V7H9	Salmonella_phage	2.5e-182	37.8
WP_000509966.1\|25850_26456_+	DNA resolvase	A0A1S5Y2X8	uncultured_archaeal_virus	5.5e-20	35.3
WP_004206885.1\|27038_29126_-	conjugal transfer protein TrbC	NA	NA	NA	NA
WP_047727540.1\|29138_30089_-	DsbC family protein	NA	NA	NA	NA
WP_004206887.1\|30099_31362_-	hypothetical protein	NA	NA	NA	NA
WP_004187436.1\|31406_31802_-	lytic transglycosylase domain-containing protein	NA	NA	NA	NA
WP_004206889.1\|31906_32290_-	DUF1496 domain-containing protein	NA	NA	NA	NA
WP_004206890.1\|32369_33023_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_004187429.1\|33114_33372_+	type II toxin-antitoxin system antitoxin PemI	NA	NA	NA	NA
WP_147810693.1\|33340_33706_+	type II toxin-antitoxin system toxin endoribonuclease PemK	NA	NA	NA	NA
WP_004187425.1\|33798_34233_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	1.2e-29	55.3
WP_004187413.1\|35607_35817_-	hypothetical protein	NA	NA	NA	NA
WP_004187411.1\|35819_36038_-	hypothetical protein	NA	NA	NA	NA
WP_004206893.1\|36082_36766_-	hypothetical protein	NA	NA	NA	NA
WP_004206894.1\|36766_37024_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_004206895.1\|37041_38316_-	hypothetical protein	NA	NA	NA	NA
WP_004206896.1\|38843_39200_+	hypothetical protein	NA	NA	NA	NA
WP_015062853.1\|39177_39756_+	hypothetical protein	NA	NA	NA	NA
39740:39754	attL	NA	NA	NA	NA
WP_004206898.1\|39757_40165_+	hypothetical protein	NA	NA	NA	NA
WP_004206899.1\|40317_40863_-	hypothetical protein	NA	NA	NA	NA
WP_004206900.1\|41003_41474_+	hypothetical protein	NA	NA	NA	NA
WP_004187394.1\|41460_41709_+	helix-turn-helix transcriptional regulator	A0A248SLB9	Klebsiella_phage	1.6e-10	53.0
WP_004206901.1\|41701_42289_+	restriction endonuclease	NA	NA	NA	NA
WP_004187390.1\|42285_42771_+	hypothetical protein	NA	NA	NA	NA
WP_020316874.1\|42812_43016_+	hypothetical protein	NA	NA	NA	NA
WP_004187383.1\|43034_43775_+\|integrase	tyrosine-type recombinase/integrase	I3WFA4	Macacine_betaherpesvirus	9.5e-22	51.6
46135:46149	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP011642

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP011642_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011642_1

2104471-2104684

Orphan

I-E

Consensus_repeat	Method
ACGGTTTATCCCCGCTGGCGCGGGGAACAC	CRT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRISPRCasFinder
ATCAACGGTTTATCCCCGCTGGCGCGGGGAACACCTGC	PILER-CR

3 spacers

The CRISPR arrays of NZ_CP011642_1

>merge|NZ_CP011642|1|2104471-2104684|CRT,CRISPRCasFinder,PILER-CR
ATTGTTCCTCCCCGCTGACGCGGGGAACACCTGCTGTGCGATATCAACAGCGATCTTATCAACGGTTTATCCCCGCTGGCGCGGGGAACACTATTGTCATAACGCCGGATGCAATGCGATCTACGGTTTATCCCCGCTGGCGCGGGGAACACCTGCGCCTTCTCAGAGAAAGCCCGGATTTCGTCGGTTTATCCCCGCTGGCGCGGGGAACACT

>NZ_CP011642|1|1|2104471-2104683|CRT
ATTGTTCCTCCCCGCTGACGCGGGGAACAC	CTGCTGTGCGATATCAACAGCGATCTTATCA
ACGGTTTATCCCCGCTGGCGCGGGGAACAC	TATTGTCATAACGCCGGATGCAATGCGATCT
ACGGTTTATCCCCGCTGGCGCGGGGAACAC	CTGCGCCTTCTCAGAGAAAGCCCGGATTTCG
TCGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP011642|1|1|2104472-2104684|CRISPRCasFinder
TTGTTCCTCCCCGCTGACGCGGGGAACAC	CTGCTGTGCGATATCAACAGCGATCTTATCAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TATTGTCATAACGCCGGATGCAATGCGATCTA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CTGCGCCTTCTCAGAGAAAGCCCGGATTTCGT
CGGTTTATCCCCGCTGGCGCGGGGAACACT

>NZ_CP011642|1|1|2104479-2104626|PILER-CR
TCCCCGCTGACGCGGGGAACACCTGCTGTGCGATATCA	ACAGCGATCTTATCAACGGTTTA
TCCCCGCTGGCGCGGGGAACACTATTGTCATAACGCCG	GATGCAATGCGATCTACGGTTTATCCC
CGCTGGCGCGGGGAACACCTGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011642.1\|WP_047571695.1\|2101642_2102959_+\|putrescine-ornithine-antiporter	unknown	unknown	gnl\|CDD\|182622
NZ_CP011642.1\|WP_047729236.1\|2099417_2101580_+\|ornithine-decarboxylase-SpeF	unknown	unknown	gnl\|CDD\|237434
NZ_CP011642.1\|WP_038879764.1\|2107399_2107921_-\|SCP2-domain-containing-protein	unknown	unknown	gnl\|CDD\|225696
NZ_CP011642.1\|WP_033652768.1\|2097502_2098135_-\|NAD(P)H-binding-protein	unknown	unknown	gnl\|CDD\|187560
NZ_CP011642.1\|WP_047729233.1\|2096763_2097546_+\|phosphonate-metabolism-protein-PhnP	unknown	unknown	gnl\|CDD\|183052
NZ_CP011642.1\|WP_033638900.1\|2114482_2115454_-\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|235136
NZ_CP011642.1\|WP_038879115.1\|2112210_2113350_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|378925
NZ_CP011642.1\|WP_038879110.1\|2110275_2111541_+\|aminopeptidase-P-family-protein	unknown	unknown	gnl\|CDD\|223085
NZ_CP011642.1\|WP_047730801.1\|2104117_2104402_+\|GIY-YIG-nuclease-family-protein	unknown	unknown	gnl\|CDD\|178979
NZ_CP011642.1\|WP_038879118.1\|2113346_2114501_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|378925
NZ_CP011642.1\|WP_047729238.1\|2103462_2103981_+\|nuclear-transport-factor-2-family-protein	unknown	unknown	gnl\|CDD\|378915
NZ_CP011642.1\|WP_033648653.1\|2098165_2098606_-\|YhbP-family-protein	unknown	unknown	gnl\|CDD\|235127
NZ_CP011642.1\|WP_015376422.1\|2108179_2109175_+\|U32-family-peptidase	unknown	unknown	gnl\|CDD\|223896
NZ_CP011642.1\|WP_038879121.1\|2115672_2116698_+\|LLM-class-flavin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|182505
NZ_CP011642.1\|WP_015376431.1\|2096148_2096751_+\|phosphonate-metabolism-protein	unknown	unknown	gnl\|CDD\|132351
NZ_CP011642.1\|WP_038879112.1\|2111559_2112195_+\|DUF1956-domain-containing-protein	unknown	unknown	gnl\|CDD\|236928
NZ_CP011642.1\|WP_047729230.1\|2095582_2096152_+\|ribose-1,5-bisphosphokinase	unknown	unknown	gnl\|CDD\|236648
NZ_CP011642.1\|WP_004933443.1\|2099039_2099144_+\|DUF2618-domain-containing-protein	unknown	unknown	gnl\|CDD\|287855
NZ_CP011642.1\|WP_038879107.1\|2109186_2110065_+\|U32-family-peptidase	unknown	unknown	gnl\|CDD\|237968
NZ_CP011642.1\|WP_047729239.1\|2106902_2107406_-\|N-acetyltransferase	unknown	unknown	gnl\|CDD\|225695

Protein	Function_ID	Function_description	E-value
NZ_CP011642.1\|WP_047571695.1\|2101642_2102959_+\|putrescine-ornithine-antiporter	gnl\|CDD\|182622	PRK10655, potE, putrescine transporter; Provisional.	0
NZ_CP011642.1\|WP_047729236.1\|2099417_2101580_+\|ornithine-decarboxylase-SpeF	gnl\|CDD\|237434	PRK13578, PRK13578, ornithine decarboxylase; Provisional.	0
NZ_CP011642.1\|WP_038879764.1\|2107399_2107921_-\|SCP2-domain-containing-protein	gnl\|CDD\|225696	COG3154, COG3154, Putative lipid carrier protein [Lipid metabolism].	5.22076e-71
NZ_CP011642.1\|WP_033652768.1\|2097502_2098135_-\|NAD(P)H-binding-protein	gnl\|CDD\|187560	cd05250, CC3_like_SDR_a, CC3(TIP30)-like, atypical (a) SDRs. Atypical SDRs in this subgroup include CC3 (also known as TIP30) which is implicated in tumor suppression. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine rich NAD(P)-binding motif that resembles the extended SDRs, and have an active site triad of the SDRs (YXXXK and upstream Ser), although the upstream Asn of the usual SDR active site is substituted with Asp. For CC3, the Tyr of the triad is displaced compared to the usual SDRs and the protein is monomeric, both these observations suggest that the usual SDR catalytic activity is not present. NADP appears to serve an important role as a ligand, and may be important in the interaction with other macromolecules. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	3.06097e-68
NZ_CP011642.1\|WP_047729233.1\|2096763_2097546_+\|phosphonate-metabolism-protein-PhnP	gnl\|CDD\|183052	PRK11244, phnP, carbon-phosphorus lyase complex accessory protein; Provisional.	1.97842e-152
NZ_CP011642.1\|WP_033638900.1\|2114482_2115454_-\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|235136	PRK03598, PRK03598, putative efflux pump membrane fusion protein; Provisional.	1.32991e-40
NZ_CP011642.1\|WP_038879115.1\|2112210_2113350_-\|ABC-transporter-permease	gnl\|CDD\|378925	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein. This family is related to the ABC-2 membrane transporter family pfam01061.	1.33733e-23
NZ_CP011642.1\|WP_038879110.1\|2110275_2111541_+\|aminopeptidase-P-family-protein	gnl\|CDD\|223085	COG0006, PepP, Xaa-Pro aminopeptidase [Amino acid transport and metabolism].	2.41373e-25
NZ_CP011642.1\|WP_047730801.1\|2104117_2104402_+\|GIY-YIG-nuclease-family-protein	gnl\|CDD\|178979	PRK00329, PRK00329, GIY-YIG nuclease superfamily protein; Validated.	2.93297e-39
NZ_CP011642.1\|WP_038879118.1\|2113346_2114501_-\|ABC-transporter-permease	gnl\|CDD\|378925	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein. This family is related to the ABC-2 membrane transporter family pfam01061.	7.10502e-21
NZ_CP011642.1\|WP_047729238.1\|2103462_2103981_+\|nuclear-transport-factor-2-family-protein	gnl\|CDD\|378915	pfam12680, SnoaL_2, SnoaL-like domain. This family contains a large number of proteins that share the SnoaL fold.	5.94707e-06
NZ_CP011642.1\|WP_033648653.1\|2098165_2098606_-\|YhbP-family-protein	gnl\|CDD\|235127	PRK03467, PRK03467, hypothetical protein; Provisional.	2.4147e-89
NZ_CP011642.1\|WP_015376422.1\|2108179_2109175_+\|U32-family-peptidase	gnl\|CDD\|223896	COG0826, COG0826, Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones].	4.80562e-116
NZ_CP011642.1\|WP_038879121.1\|2115672_2116698_+\|LLM-class-flavin-dependent-oxidoreductase	gnl\|CDD\|182505	PRK10508, PRK10508, luciferase-like monooxygenase.	0
NZ_CP011642.1\|WP_015376431.1\|2096148_2096751_+\|phosphonate-metabolism-protein	gnl\|CDD\|132351	TIGR03308, phn_thr-fam, phosphonate metabolism protein, transferase hexapeptide repeat family. This family of proteins contains copies of the Bacterial transferase hexapeptide repeat family (pfam00132) and is only found in operons encoding the phosphonate C-P lyase system (GenProp0232). Many C-P lyase operons, however, lack a homolog of this protein.	8.18181e-85
NZ_CP011642.1\|WP_038879112.1\|2111559_2112195_+\|DUF1956-domain-containing-protein	gnl\|CDD\|236928	PRK11552, PRK11552, putative DNA-binding transcriptional regulator; Provisional.	1.06974e-32
NZ_CP011642.1\|WP_047729230.1\|2095582_2096152_+\|ribose-1,5-bisphosphokinase	gnl\|CDD\|236648	PRK10078, PRK10078, ribose 1,5-bisphosphokinase; Provisional.	1.09132e-99
NZ_CP011642.1\|WP_004933443.1\|2099039_2099144_+\|DUF2618-domain-containing-protein	gnl\|CDD\|287855	pfam10940, DUF2618, Protein of unknown function (DUF2618). This bacterial family of proteins has no known function. The sequences within the family are highly conserved.	0.00101809
NZ_CP011642.1\|WP_038879107.1\|2109186_2110065_+\|U32-family-peptidase	gnl\|CDD\|237968	PRK15447, PRK15447, putative protease; Provisional.	0
NZ_CP011642.1\|WP_047729239.1\|2106902_2107406_-\|N-acetyltransferase	gnl\|CDD\|225695	COG3153, COG3153, Predicted acetyltransferase [General function prediction only].	1.66463e-56

>NZ_CP011642.1|WP_047730801.1|2104117_2104402_+|GIY-YIG-nuclease-family-protein
MDLPHWHLYMLRLPSGMLYTGITTDVARRLAQHQAGKGAKALRGKGELTLAFHCQVGDRSTALKLEYRVKQLSKIQKERLVNHPPLSLAYLLPG
>NZ_CP011642.1|WP_047729238.1|2103462_2103981_+|nuclear-transport-factor-2-family-protein
MKNNEKLIVKAEETQLPKDVVYAFLMNTSKEDVTHAAMHLIDENAVYTSLNFENKELKQIEPWAGTSQGRQVYIDTFSNVGTYWEINDFTIGDILADGGTVAVFGQFTYTSVALGHQFTSPFAIKAQVKDGKIVYFQFMEDTYASAASFRVSGEWTIQHHKGEENKFTVGVK
>NZ_CP011642.1|WP_047571695.1|2101642_2102959_+|putrescine-ornithine-antiporter
MSKSNNKMGVVQLTILTAVNMMGSGIIMLPTKLAEVGTISIVSWLVTAVGSMALAYAFAKCGMFSRKSGGMGGYAEYAFGKSGNFMANYTYGVSLLIANIAIAISAVGYGTELFGATLSPLGICIATIGVLWLATVANFGGARITGKISGITVWGVIIPVVGISVIGWYWFSGSAYVAAWNPHQVPTFEAIGASISMTLWAFLGLESACANTDVVENPERNVPIAVLGGTLSAAVIYIISTNVIAGIVPNMDLANSTAPFGLAFSHMFNPTVGKIIMALMVMSCVGSLLGWQFTIAQVFKSSADSGFFPKIFSKLSKADAPVKGMLTIVVIQSGLSLMTISPSLNKQFNVLVNLAVVTNIIPYILSMAALVIIQKVAKVPDNKARIANIIAGIGALYSFYALYSSGEEAMMWGAIATFLGWTLYGIVSPRFELAGKKG
>NZ_CP011642.1|WP_047729236.1|2099417_2101580_+|ornithine-decarboxylase-SpeF
MKKLKIAANTQTLGCFETERDIVDVHHSDFNDVAAIVLSVDDVTQGMLARIEEHGLNIPLFVAVCCEEELDNAVLPALHGVFELCGKNTQFYGKQLEAAAAKYESELLPPFFNTLTQYVEMGNATFACPGHQGGEFFRKHPAGRQFFDFYGETLFRSDMCNADVKLGDLLIHEGAPCAAQQHAAKVFNADKTYFVLNGTSASNKVATNALLTRGDLVLFDRNNHKSNHHGALIQAGATPVYLETARNPFGFIGGIDAHCFDERYLRQQIREVAPERANEARPFRLAIIQLGTYDGTIYNARQVVDKIGHLCDYILFDSAWVGYEQFIPMMKDCSPLLLELNENDPGIIVTQSVHKQQAGFSQTSQIHKKDRHIKGQSRYCNHKRFNNAFMLHASTSPFYPLFAALDVNAKMHEGKSGQRLWQECVRVGIEARKMLLDTCTMIKPFVPDQIDGKPWQAYDTAAMANDLRFFNFVPGEKWHAFEGYAESQYFVDPCKLLLTTPGIDTATGSYSEFGIPATILANYLRENGIVPEKCDLNSILFLLTPAEDIAKMQHLVALIARFEKHIEQNSLLSEVLPAVYKNHQQRYKNYTIRQLCQEMHDLYVSYDVKELQKEMFRKSYFPRVVMNPQDANTEFVRGNVELVSLAKAEGRIAAEGALPYPPGVLCVVPGEIWGGAAQRYFLALEEGINLLPGFAPELQGVYIQQDEDGWNRAYGYVMKN
>NZ_CP011642.1|WP_004933443.1|2099039_2099144_+|DUF2618-domain-containing-protein
MENNNRKMAHIRRTTHIMMMAHRSCFSFAFFNYR
>NZ_CP011642.1|WP_033648653.1|2098165_2098606_-|YhbP-family-protein
MNTPEQRQQIADFIGKQHVLTLCAGDGLDMWCANCFYVFDAAAMALWLMTEPHTRHGGLMLNNGRVVGTIAPKPKSIALIRGVQYRAEAVLLSGEEAEAARARYCKRFPIARAMKASVWRLDLHEVKMTDNTLGFGKKLHWARSIL
>NZ_CP011642.1|WP_033652768.1|2097502_2098135_-|NAD(P)H-binding-protein
MARALLVGATGLVGRELLQLLQSDPQITAIVAPTRTPLPPHGKLTNPVGDALFELLSSLQQPVDLVFCCLGTTRRAAGSADAFRYVDYQLVVESALTGRRLGAQHCLVVSALGANADSTFLYNRTKGEMEQALREQHWPRLTLVRPSMLVGDRPAPRLMERLTLPLFRLLPGKWRAVSAKDVAQTLLQQAFTPGEGVRVLESDRLHCYRG
>NZ_CP011642.1|WP_047729233.1|2096763_2097546_+|phosphonate-metabolism-protein-PhnP
MQLTFLGTGGAQQVPVFGCDCLICQRARREPAFRRRACSAMLNYQGETTLLDAGLPALERRFSAGQIQRFLLTHYHMDHVQGLFPLRWGCGNSIPVYGPPDEQGCDDLFKHPGILAFQPPLAPFATVELGGMRITPLPLQHSKLTHGYLIQAAGAALAYLTDTVGLPPATADYLQNVALDLLVLDCSLPPQPQAPRNHNDLTRAQETQRLLQPKRTLLTHISHHLDLWLLDNELPTGLELAFDHLSVSLGSSAADPTPAP
>NZ_CP011642.1|WP_015376431.1|2096148_2096751_+|phosphonate-metabolism-protein
MNDFAQPKIGDNVTLNRTRLGQYVHLADDAILEEVEMGDYSYTAGHNQIFYATIGKFVSIASYARINPGNHPTYQRIAQHHFTYRASEYGLGEDDAAFFDWRREHHVTVGHDVWIGHNAILMPGVSVGNGAVIGSAAVVTKDVEPYSIVAGVAAKKIGMRFDDALIERIERSQWWHWDHATLQARLADFRDINRFAQKYL
>NZ_CP011642.1|WP_047729230.1|2095582_2096152_+|ribose-1,5-bisphosphokinase
MARLIYLMGPSGAGKDSLLAALRADADSAPLVAHRYITRPADAGCENHIALSEPEFLRRRAKGLFALDWQAHQQHYAFGIEVDLWLLQGIDVAVNGSRAHLPQAQQRYGAQLLPVCLQVSAAILLRRLQDRGRESAEQIEQRLARAAEYQQSLPAGCRVLHNDGPLDDTLAALLALLPTATRQAQDATP
>NZ_CP011642.1|WP_047729239.1|2106902_2107406_-|N-acetyltransferase
MLIRVEIPVDAAGIDALLRRAFGRDDEADLVQQLREDGLLTLGVVATDDEGGVVGYAAFSPVDVAGEDRQWVALAPLAVDESLRRQGLAEKLVYEGLDSLNEFSYAAVVVLGDPVYYGRFGFKPAAAYGLHCRWPDTESAFQVYSLAEDALNGVSGEVAFSAPFNCF
>NZ_CP011642.1|WP_038879764.1|2107399_2107921_-|SCP2-domain-containing-protein
MLEQLRARLVRQGPSLLRIPLKFTPFALQRQLLQQVLSWQFRQALADGDLEFLESRWLKIEVRDLALQWFMTVENDKLVVSQHAEADVSFSGDANDLILIAARKQDPDTLFFQRRLQIEGDTELGLYVKNLMDAIELESMPAPLRMGLLQLADFVEAGLQEGTAPASRVAVSC
>NZ_CP011642.1|WP_015376422.1|2108179_2109175_+|U32-family-peptidase
MELLCPAGNLPALKAAVDNGADAVYIGLKDDTNARHFAGLNFTEKKLQEAVDYVHRHGRKLHIAINTFAHPDGYARWQRAVDMAAQLGADALILADLAMLEYAAQRYPQLERHVSVQASATNEEAIRFYQRNFEVGRVVLPRVLSMHQVKQLARTSPVPLEVFAFGSLCIMAEGRCYLSSYLTGESPNTVGACSPARFVRWQQTPQGMESRLNDVLIDRYQDHENAGYPTLCKGRYLVDDVRYHALEEPTSLNTLELLPELLAANIASVKIEGRQRSPAYVSQVARVWRQAIDRCQADPAAYRADAAWMETLGAMSEGTQTTLGAYHRKWQ
>NZ_CP011642.1|WP_038879107.1|2109186_2110065_+|U32-family-peptidase
MKYALGPVLYYWPKNDIATFYQQAADSSADIIYLGESVCAKRREMKVGDWLALAREIAHSGKQVVISTLALLQAPSELNELKRYVENGEFLFEANDLGAVNMAAERGLPFVAGHALNSYNAYTLRLLRRQGMIRWCMPVELSRDWLANLLTQCDELGFRHDFEVEVLSYGHLPLAYSARCFTARSENRGKDECETCCIKYPQGRMMRSQEQQQVFVLNGIQTMSGYCYNLGNELPNMQGLVDIVRLSPQGAETLAQIDAFRANERGEQPLTLTDHADCNGYWRRVAGLELVS
>NZ_CP011642.1|WP_038879110.1|2110275_2111541_+|aminopeptidase-P-family-protein
MLTRPEPLSLAERDRRWQLARDIMQTEDLAALIVYGDREAAAPAGFAPDCYFTNDRPGSIVVFVGDESPRIYTFASMMVADHLQASLRGDLQWIGAEQLFVGKTGRDVGAWLAERRLAGTRIGIIGLEPYPPFYFDGAMPARTLQGLTEALPTANWIPVYREFFRRASVKSEEELRLVRYAAHIGETMSETLRATARPGVSEADLVAAVTATCFSMGGYTAELLLGSGPEYVGWGPPAWQYRAQAPRVLQEGDLVLSEIFALYGMMETQHQAAIAIGEVHPDILHAAAIARASYEAGLGALRTGNTFGDVVDAMEQPLLAAGCWHVHPLIHSLNPYGPVGFGTAPGIESLPEAARYAQLRRLPTVGRELPLQAGMCFAFEPSCAFGRHMANLGGTVLVGETGGVALNENSTRLMFAGGSHR
>NZ_CP011642.1|WP_038879112.1|2111559_2112195_+|DUF1956-domain-containing-protein
MQNQDRLNERTRETQERLIRAGLSLFSKHGLEGVRTRQLAEAAGVNQSAIPYHFGGKEGVYLAVLEHVAGSIVAHLALPRRLLAGQTPAEALRTLMQDFVTALLGSETSAASSLLLAREQLQPSADFDALHTCLFSPLHHTVSELVTAIRSDQPDLKENILRAHAVLGQALSFAVAREALLRRLGENALSPQEIAQIATLVGTMSVAAAQG
>NZ_CP011642.1|WP_038879115.1|2112210_2113350_-|ABC-transporter-permease
MKLYWQTFVKVLLGMLERPVWLMLILSLCIMSMVYANRTVWDLPVGVVDQDHSTASRQLIRQLDATSKIAIETYDSLEQAQRDLSWRKLFAVIIMPVDLEKKILSGQNIVVPVYGDATNRLANGQIQQDVVAAYQQLLTEYNNGLLLRSGFSERQAQILLTPILGQTLDVFNPGISFAAIIFPGLLVMLLQHSLLIACIRVNIAMKSMPGGKAPLAAHLGGLTALLPIWLFLSIVLFVLWPWVLGYRQTANIAELLLLTFPFLLAVLGLGKLVTECLRSVEMIYLTLAFITTPIFYLSGTIWPLQSMPAWVRAISYSIPSTWGTKAIAGVNQMGLSLNEVWGDVVMMLILGVVYTLLGFGVAFLRNSVALRGMFRKRRA
>NZ_CP011642.1|WP_038879118.1|2113346_2114501_-|ABC-transporter-permease
MAMERVRAGWRCFSHAFDKECRVAFRSPVVHWLSWIFPLILFALISSNFSEGTLLDLPVSVVDSDHSPLSKSLTRRLDAGSHAHVEAYGGGLPESLSRLRSAQDYALLYIPPDLEANALSGKQPSVVMYYNALFYGAGLYSTQDFGGLMNEINANTRSIIATEMGKTLPPLADVTLSYGSLFNASGSYIYYQQFAATIHLLQLFAVTCMIYVLARSKSLLQAKPFSLALLGKLAPYTLCFTTLLMVEIAALVGIFDARVSGNPLFMLLIGLFYVMAAQSIGLLLYTFTGSTITAYSLIGILVSIAMTFSGMAVPELSMPLPARIISNIEPLTHALYAMFDVFLRQVHASAIFSVCALLAVYPLVAALLVRNRLPARLEKEGNAG
>NZ_CP011642.1|WP_033638900.1|2114482_2115454_-|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit
MKKKTLFTLLLMLAAIALAILFRAHNQDLLLQGEVDAPEVIVASKAKGRVVERLIERGDDVKSGQLIIQLDSPELMAQLRSAQATRDEAKAQLELSLHGTREESIRNLRANLAQAEAQYRNAQNDYNRNLSVAGKGYISKSELDASRRSRDTAFQQVQAAKANLDEGINGDRVEQRQQYAAALRAAEENLLQIQAQSDDLQVKAPVDGEVGPIPAEVGELLNAGSPLVTLIRVPDAYFVFNLREDILAHVRKGDKVKLRVPALKDKMIDTEVRYIAPLGDYATKRATRATGDFDLKTFEVRLYPSQPVDGLRPGMSTLWQWKE
>NZ_CP011642.1|WP_038879121.1|2115672_2116698_+|LLM-class-flavin-dependent-oxidoreductase
MDDVMTENTAVPLSVLDLSPIPQGAKARDAFHCSLDLAQHAERWGYRRYWLAEHHNMTGIGSAATSVLLGYLAAGTQSIRLGSGGVMLPNHAPLVIAEQFGTLESLYPGRIDLGLGRAPGTDQRTMMALRRHLSGDVDTFPRDVQELQNYFCDAQPGQPVQAVPGQGLHVPLWLLGSSLYSAQLAAQLGLPFAFASHFAPDMLFQALQLYRENFKPSKQLAQPHAMVCVNVVAADSDSDARFLFSSMQQQFINLRRGSPGPLPPPVDNIHALWTAGEQYGVEQALRMSIVGDEKTVRHGLQTLLRETDADEIMVNGQIFDHQARLRSFEIVAGVQGDVVKG

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Crispr_ID: NZ_CP011642_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011642_2

2104697-2106740

Orphan

I-E

Consensus_repeat	Method
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	PILER-CR
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRISPRCasFinder

33 spacers

The CRISPR arrays of NZ_CP011642_2

>merge|NZ_CP011642|2|2104697-2106740|CRT,PILER-CR,CRISPRCasFinder
GGTTCAACTGGTGCTGGCGCGGGGAACACTTCGATGGTGCGCGGGTTGTACAGCGTGACACCGGTTTATCCCCGCTGGCGCGGGGAACACTTTATATAGCCCTATCAAGGGTCTCATAATCGCGGTTTATCCCCGCTGGCGCGGGGAACACCAACTCGGCCTGACGCAAAAAGAATTGGCGGCCGGTTTATCCCCGCTGGCGCGGGGAACACGCGGTAAAGGCTGCTTCGTCGTCTTCTTCCTCCGGTTTATCCCCGCTGGCGCGGGGAACACACCATCACGCGGCCTGTCATGTGAAACGCCAGCGGTTTATCCCCGCTGGCGCGGGGAACACTGTAACAGCCCGTAATAGCGCGATAATCGTGCCGGTTTATCCCCGCTGGCGCGGGGAACACTCCTCCAAAGCGCCCGATGCAACATCCATCAACGTTTTATCCCCGCTGGCGCGGGGAACACGTGAAGACCAACCCATATTTCTACCGCGTCACCGGTTTATCCCCGCTGGCGCGGGGAACACGCGCAGCTTCAGGTAACGGTCTGCGCCGGTGCCGGTTTATCCCCGCTGGCGCGGGGAACACGTGAAGACCAACCCATATTTCTACCGCGTCACCGGTTTATCCCCGCTGGCGCGGGGAACACGCGCAGCTTCAGGTAACGGTCTGCGCCGGTGCCGGTTTATCCCCGCTGGCGCGGGGAACACCGACGAAATCAGAAATCCGCTGGCTGCAATGCCGGTTTATCCCCGCTGGCGCGGGGAACACTACTGGGTATCTATTTAGTTTCATTACGCCACCGGTTTATCCCCGCTGGCGCGGGGAACACCTAAAATGGCATGGACACAATCTTGCCCAATACGGTTTATCCCCGCTGGCGCGGGGAACACATTTAGACCATTGCCAGGGGCAACCGAGAATCCGGTTTATCCCCGCTGGCGCGGGGAACACACTGAGAAATGGGATCGCGTATATACCCAAGCCGGTTTATCCCCGCTGGCGCGGGGAACACGGATACCGAATCTTTCAACCCAGTTAGCGCGCCGGTTTATCCCCGCTGGCGCGGGGAACACGCGCTCGATGGGGAGACGTTGGTTTTTCCGAACGGTTTATCCCCGCTGGCGCGGGGAACACATAAAAAGCAGTGGCCCGCCGCGTGCAATCAGCGGTTTATCCCCGCTGGCGCGGGGAACACCGTTTCAGCAGATCCACATTGCCGTAAAGCTGCGGTTTATCCCCGCTGGCGCGGGGAACACTTCGCCCCTAAGCGCCACCACGGCAAACACCTCGGTTTATCCCCGCTGGCGCGGGGAACACCCGGCGTTAACCGGCGATATAAACGCAGCCCGCGGTTTATCCCCGCTGGCGCGGGGAACACGTTCACCAGATGGATCCCAATAATTACCGCCACCGGTTTATCCCCGCTGGCGCGGGGAACACTGTACCCATCCCAGTCGCCGCCATATTCGTACTGGTTTATCCCCGCTGGCGCGGGGAACACTGAGCGAGTCTGGTTTCGATGAAATGCCGATACGGTTTATCCCCGCTGGCGCGGGGAACACCGATCTTACAGTGGCGGCAATGTTACGTTGACCGGTTTATCCCCGCTGGCGCGGGGAACACATGGCCACGCATGACTGCTGGCGCACAACCTACGGTTTATCCCCGCTGGCGCGGGGAACACGCCTGAGAACGATATCGTTCGCTCAAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACACATCTGGCGCTGCGCCGGCGTCATGGCCACGGCCGGTTTATCCCCGCTGGCGCGGGGAACACTTACAATCACCGCACAAGAGGTTTAGTCCAGGCGGTTTATCCCCGCTGGCGCGGGGAACACTCACTGGCACTGACGTCATGGCCGCCTTGGGGCGGTTTATCCCCGCTGGCGCGGGGAACACGCGAACTGCGCACCGACATTTCGGCCAGTTCGCGGTTTATCCCCGCTGGCGCGGGGAACACCAGCAGGATATCAACAAGCGAGCTTCCAAGGCCGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP011642|2|2|2104697-2106740|CRT
GGTTCAACTGGTGCTGGCGCGGGGAACAC	TTCGATGGTGCGCGGGTTGTACAGCGTGACAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTTATATAGCCCTATCAAGGGTCTCATAATCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CAACTCGGCCTGACGCAAAAAGAATTGGCGGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGGTAAAGGCTGCTTCGTCGTCTTCTTCCTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACCATCACGCGGCCTGTCATGTGAAACGCCAG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGTAACAGCCCGTAATAGCGCGATAATCGTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCCTCCAAAGCGCCCGATGCAACATCCATCAA
CGTTTTATCCCCGCTGGCGCGGGGAACAC	GTGAAGACCAACCCATATTTCTACCGCGTCAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGCAGCTTCAGGTAACGGTCTGCGCCGGTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTGAAGACCAACCCATATTTCTACCGCGTCAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGCAGCTTCAGGTAACGGTCTGCGCCGGTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGACGAAATCAGAAATCCGCTGGCTGCAATGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TACTGGGTATCTATTTAGTTTCATTACGCCAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CTAAAATGGCATGGACACAATCTTGCCCAATA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATTTAGACCATTGCCAGGGGCAACCGAGAATC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACTGAGAAATGGGATCGCGTATATACCCAAGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGATACCGAATCTTTCAACCCAGTTAGCGCGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGCTCGATGGGGAGACGTTGGTTTTTCCGAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATAAAAAGCAGTGGCCCGCCGCGTGCAATCAG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGTTTCAGCAGATCCACATTGCCGTAAAGCTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTCGCCCCTAAGCGCCACCACGGCAAACACCT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CCGGCGTTAACCGGCGATATAAACGCAGCCCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTTCACCAGATGGATCCCAATAATTACCGCCAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGTACCCATCCCAGTCGCCGCCATATTCGTAC
TGGTTTATCCCCGCTGGCGCGGGGAACAC	TGAGCGAGTCTGGTTTCGATGAAATGCCGATA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGATCTTACAGTGGCGGCAATGTTACGTTGAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATGGCCACGCATGACTGCTGGCGCACAACCTA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCCTGAGAACGATATCGTTCGCTCAAAAGCTGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATCTGGCGCTGCGCCGGCGTCATGGCCACGGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTACAATCACCGCACAAGAGGTTTAGTCCAGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCACTGGCACTGACGTCATGGCCGCCTTGGGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGAACTGCGCACCGACATTTCGGCCAGTTCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CAGCAGGATATCAACAAGCGAGCTTCCAAGGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP011642|2|2|2104758-2106740|PILER-CR
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTTATATAGCCCTATCAAGGGTCTCATAATCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CAACTCGGCCTGACGCAAAAAGAATTGGCGGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGGTAAAGGCTGCTTCGTCGTCTTCTTCCTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACCATCACGCGGCCTGTCATGTGAAACGCCAG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGTAACAGCCCGTAATAGCGCGATAATCGTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCCTCCAAAGCGCCCGATGCAACATCCATCAA
CGTTTTATCCCCGCTGGCGCGGGGAACAC	GTGAAGACCAACCCATATTTCTACCGCGTCAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGCAGCTTCAGGTAACGGTCTGCGCCGGTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTGAAGACCAACCCATATTTCTACCGCGTCAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGCAGCTTCAGGTAACGGTCTGCGCCGGTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGACGAAATCAGAAATCCGCTGGCTGCAATGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TACTGGGTATCTATTTAGTTTCATTACGCCAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CTAAAATGGCATGGACACAATCTTGCCCAATA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATTTAGACCATTGCCAGGGGCAACCGAGAATC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACTGAGAAATGGGATCGCGTATATACCCAAGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGATACCGAATCTTTCAACCCAGTTAGCGCGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGCTCGATGGGGAGACGTTGGTTTTTCCGAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATAAAAAGCAGTGGCCCGCCGCGTGCAATCAG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGTTTCAGCAGATCCACATTGCCGTAAAGCTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTCGCCCCTAAGCGCCACCACGGCAAACACCT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CCGGCGTTAACCGGCGATATAAACGCAGCCCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTTCACCAGATGGATCCCAATAATTACCGCCAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGTACCCATCCCAGTCGCCGCCATATTCGTAC
TGGTTTATCCCCGCTGGCGCGGGGAACAC	TGAGCGAGTCTGGTTTCGATGAAATGCCGATA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGATCTTACAGTGGCGGCAATGTTACGTTGAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATGGCCACGCATGACTGCTGGCGCACAACCTA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCCTGAGAACGATATCGTTCGCTCAAAAGCTGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATCTGGCGCTGCGCCGGCGTCATGGCCACGGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTACAATCACCGCACAAGAGGTTTAGTCCAGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCACTGGCACTGACGTCATGGCCGCCTTGGGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGAACTGCGCACCGACATTTCGGCCAGTTCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CAGCAGGATATCAACAAGCGAGCTTCCAAGGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP011642|2|2|2104758-2106740|CRISPRCasFinder
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTTATATAGCCCTATCAAGGGTCTCATAATCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CAACTCGGCCTGACGCAAAAAGAATTGGCGGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGGTAAAGGCTGCTTCGTCGTCTTCTTCCTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACCATCACGCGGCCTGTCATGTGAAACGCCAG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGTAACAGCCCGTAATAGCGCGATAATCGTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCCTCCAAAGCGCCCGATGCAACATCCATCAA
CGTTTTATCCCCGCTGGCGCGGGGAACAC	GTGAAGACCAACCCATATTTCTACCGCGTCAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGCAGCTTCAGGTAACGGTCTGCGCCGGTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTGAAGACCAACCCATATTTCTACCGCGTCAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGCAGCTTCAGGTAACGGTCTGCGCCGGTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGACGAAATCAGAAATCCGCTGGCTGCAATGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TACTGGGTATCTATTTAGTTTCATTACGCCAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CTAAAATGGCATGGACACAATCTTGCCCAATA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATTTAGACCATTGCCAGGGGCAACCGAGAATC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACTGAGAAATGGGATCGCGTATATACCCAAGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGATACCGAATCTTTCAACCCAGTTAGCGCGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGCTCGATGGGGAGACGTTGGTTTTTCCGAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATAAAAAGCAGTGGCCCGCCGCGTGCAATCAG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGTTTCAGCAGATCCACATTGCCGTAAAGCTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTCGCCCCTAAGCGCCACCACGGCAAACACCT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CCGGCGTTAACCGGCGATATAAACGCAGCCCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTTCACCAGATGGATCCCAATAATTACCGCCAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGTACCCATCCCAGTCGCCGCCATATTCGTAC
TGGTTTATCCCCGCTGGCGCGGGGAACAC	TGAGCGAGTCTGGTTTCGATGAAATGCCGATA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGATCTTACAGTGGCGGCAATGTTACGTTGAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATGGCCACGCATGACTGCTGGCGCACAACCTA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCCTGAGAACGATATCGTTCGCTCAAAAGCTGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATCTGGCGCTGCGCCGGCGTCATGGCCACGGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTACAATCACCGCACAAGAGGTTTAGTCCAGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCACTGGCACTGACGTCATGGCCGCCTTGGGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGAACTGCGCACCGACATTTCGGCCAGTTCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CAGCAGGATATCAACAAGCGAGCTTCCAAGGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011642.1\|WP_047571695.1\|2101642_2102959_+\|putrescine-ornithine-antiporter	unknown	unknown	gnl\|CDD\|182622
NZ_CP011642.1\|WP_047729236.1\|2099417_2101580_+\|ornithine-decarboxylase-SpeF	unknown	unknown	gnl\|CDD\|237434
NZ_CP011642.1\|WP_038879764.1\|2107399_2107921_-\|SCP2-domain-containing-protein	unknown	unknown	gnl\|CDD\|225696
NZ_CP011642.1\|WP_033652768.1\|2097502_2098135_-\|NAD(P)H-binding-protein	unknown	unknown	gnl\|CDD\|187560
NZ_CP011642.1\|WP_047729233.1\|2096763_2097546_+\|phosphonate-metabolism-protein-PhnP	unknown	unknown	gnl\|CDD\|183052
NZ_CP011642.1\|WP_033638900.1\|2114482_2115454_-\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|235136
NZ_CP011642.1\|WP_038879115.1\|2112210_2113350_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|378925
NZ_CP011642.1\|WP_038879110.1\|2110275_2111541_+\|aminopeptidase-P-family-protein	unknown	unknown	gnl\|CDD\|223085
NZ_CP011642.1\|WP_047730801.1\|2104117_2104402_+\|GIY-YIG-nuclease-family-protein	unknown	unknown	gnl\|CDD\|178979
NZ_CP011642.1\|WP_038879118.1\|2113346_2114501_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|378925
NZ_CP011642.1\|WP_047729238.1\|2103462_2103981_+\|nuclear-transport-factor-2-family-protein	unknown	unknown	gnl\|CDD\|378915
NZ_CP011642.1\|WP_033648653.1\|2098165_2098606_-\|YhbP-family-protein	unknown	unknown	gnl\|CDD\|235127
NZ_CP011642.1\|WP_015376422.1\|2108179_2109175_+\|U32-family-peptidase	unknown	unknown	gnl\|CDD\|223896
NZ_CP011642.1\|WP_038879121.1\|2115672_2116698_+\|LLM-class-flavin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|182505
NZ_CP011642.1\|WP_015376431.1\|2096148_2096751_+\|phosphonate-metabolism-protein	unknown	unknown	gnl\|CDD\|132351
NZ_CP011642.1\|WP_038879112.1\|2111559_2112195_+\|DUF1956-domain-containing-protein	unknown	unknown	gnl\|CDD\|236928
NZ_CP011642.1\|WP_047729230.1\|2095582_2096152_+\|ribose-1,5-bisphosphokinase	unknown	unknown	gnl\|CDD\|236648
NZ_CP011642.1\|WP_004933443.1\|2099039_2099144_+\|DUF2618-domain-containing-protein	unknown	unknown	gnl\|CDD\|287855
NZ_CP011642.1\|WP_038879107.1\|2109186_2110065_+\|U32-family-peptidase	unknown	unknown	gnl\|CDD\|237968
NZ_CP011642.1\|WP_047729239.1\|2106902_2107406_-\|N-acetyltransferase	unknown	unknown	gnl\|CDD\|225695

Protein	Function_ID	Function_description	E-value
NZ_CP011642.1\|WP_047571695.1\|2101642_2102959_+\|putrescine-ornithine-antiporter	gnl\|CDD\|182622	PRK10655, potE, putrescine transporter; Provisional.	0
NZ_CP011642.1\|WP_047729236.1\|2099417_2101580_+\|ornithine-decarboxylase-SpeF	gnl\|CDD\|237434	PRK13578, PRK13578, ornithine decarboxylase; Provisional.	0
NZ_CP011642.1\|WP_038879764.1\|2107399_2107921_-\|SCP2-domain-containing-protein	gnl\|CDD\|225696	COG3154, COG3154, Putative lipid carrier protein [Lipid metabolism].	5.22076e-71
NZ_CP011642.1\|WP_033652768.1\|2097502_2098135_-\|NAD(P)H-binding-protein	gnl\|CDD\|187560	cd05250, CC3_like_SDR_a, CC3(TIP30)-like, atypical (a) SDRs. Atypical SDRs in this subgroup include CC3 (also known as TIP30) which is implicated in tumor suppression. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine rich NAD(P)-binding motif that resembles the extended SDRs, and have an active site triad of the SDRs (YXXXK and upstream Ser), although the upstream Asn of the usual SDR active site is substituted with Asp. For CC3, the Tyr of the triad is displaced compared to the usual SDRs and the protein is monomeric, both these observations suggest that the usual SDR catalytic activity is not present. NADP appears to serve an important role as a ligand, and may be important in the interaction with other macromolecules. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	3.06097e-68
NZ_CP011642.1\|WP_047729233.1\|2096763_2097546_+\|phosphonate-metabolism-protein-PhnP	gnl\|CDD\|183052	PRK11244, phnP, carbon-phosphorus lyase complex accessory protein; Provisional.	1.97842e-152
NZ_CP011642.1\|WP_033638900.1\|2114482_2115454_-\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|235136	PRK03598, PRK03598, putative efflux pump membrane fusion protein; Provisional.	1.32991e-40
NZ_CP011642.1\|WP_038879115.1\|2112210_2113350_-\|ABC-transporter-permease	gnl\|CDD\|378925	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein. This family is related to the ABC-2 membrane transporter family pfam01061.	1.33733e-23
NZ_CP011642.1\|WP_038879110.1\|2110275_2111541_+\|aminopeptidase-P-family-protein	gnl\|CDD\|223085	COG0006, PepP, Xaa-Pro aminopeptidase [Amino acid transport and metabolism].	2.41373e-25
NZ_CP011642.1\|WP_047730801.1\|2104117_2104402_+\|GIY-YIG-nuclease-family-protein	gnl\|CDD\|178979	PRK00329, PRK00329, GIY-YIG nuclease superfamily protein; Validated.	2.93297e-39
NZ_CP011642.1\|WP_038879118.1\|2113346_2114501_-\|ABC-transporter-permease	gnl\|CDD\|378925	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein. This family is related to the ABC-2 membrane transporter family pfam01061.	7.10502e-21
NZ_CP011642.1\|WP_047729238.1\|2103462_2103981_+\|nuclear-transport-factor-2-family-protein	gnl\|CDD\|378915	pfam12680, SnoaL_2, SnoaL-like domain. This family contains a large number of proteins that share the SnoaL fold.	5.94707e-06
NZ_CP011642.1\|WP_033648653.1\|2098165_2098606_-\|YhbP-family-protein	gnl\|CDD\|235127	PRK03467, PRK03467, hypothetical protein; Provisional.	2.4147e-89
NZ_CP011642.1\|WP_015376422.1\|2108179_2109175_+\|U32-family-peptidase	gnl\|CDD\|223896	COG0826, COG0826, Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones].	4.80562e-116
NZ_CP011642.1\|WP_038879121.1\|2115672_2116698_+\|LLM-class-flavin-dependent-oxidoreductase	gnl\|CDD\|182505	PRK10508, PRK10508, luciferase-like monooxygenase.	0
NZ_CP011642.1\|WP_015376431.1\|2096148_2096751_+\|phosphonate-metabolism-protein	gnl\|CDD\|132351	TIGR03308, phn_thr-fam, phosphonate metabolism protein, transferase hexapeptide repeat family. This family of proteins contains copies of the Bacterial transferase hexapeptide repeat family (pfam00132) and is only found in operons encoding the phosphonate C-P lyase system (GenProp0232). Many C-P lyase operons, however, lack a homolog of this protein.	8.18181e-85
NZ_CP011642.1\|WP_038879112.1\|2111559_2112195_+\|DUF1956-domain-containing-protein	gnl\|CDD\|236928	PRK11552, PRK11552, putative DNA-binding transcriptional regulator; Provisional.	1.06974e-32
NZ_CP011642.1\|WP_047729230.1\|2095582_2096152_+\|ribose-1,5-bisphosphokinase	gnl\|CDD\|236648	PRK10078, PRK10078, ribose 1,5-bisphosphokinase; Provisional.	1.09132e-99
NZ_CP011642.1\|WP_004933443.1\|2099039_2099144_+\|DUF2618-domain-containing-protein	gnl\|CDD\|287855	pfam10940, DUF2618, Protein of unknown function (DUF2618). This bacterial family of proteins has no known function. The sequences within the family are highly conserved.	0.00101809
NZ_CP011642.1\|WP_038879107.1\|2109186_2110065_+\|U32-family-peptidase	gnl\|CDD\|237968	PRK15447, PRK15447, putative protease; Provisional.	0
NZ_CP011642.1\|WP_047729239.1\|2106902_2107406_-\|N-acetyltransferase	gnl\|CDD\|225695	COG3153, COG3153, Predicted acetyltransferase [General function prediction only].	1.66463e-56

>NZ_CP011642.1|WP_047730801.1|2104117_2104402_+|GIY-YIG-nuclease-family-protein
MDLPHWHLYMLRLPSGMLYTGITTDVARRLAQHQAGKGAKALRGKGELTLAFHCQVGDRSTALKLEYRVKQLSKIQKERLVNHPPLSLAYLLPG
>NZ_CP011642.1|WP_047729238.1|2103462_2103981_+|nuclear-transport-factor-2-family-protein
MKNNEKLIVKAEETQLPKDVVYAFLMNTSKEDVTHAAMHLIDENAVYTSLNFENKELKQIEPWAGTSQGRQVYIDTFSNVGTYWEINDFTIGDILADGGTVAVFGQFTYTSVALGHQFTSPFAIKAQVKDGKIVYFQFMEDTYASAASFRVSGEWTIQHHKGEENKFTVGVK
>NZ_CP011642.1|WP_047571695.1|2101642_2102959_+|putrescine-ornithine-antiporter
MSKSNNKMGVVQLTILTAVNMMGSGIIMLPTKLAEVGTISIVSWLVTAVGSMALAYAFAKCGMFSRKSGGMGGYAEYAFGKSGNFMANYTYGVSLLIANIAIAISAVGYGTELFGATLSPLGICIATIGVLWLATVANFGGARITGKISGITVWGVIIPVVGISVIGWYWFSGSAYVAAWNPHQVPTFEAIGASISMTLWAFLGLESACANTDVVENPERNVPIAVLGGTLSAAVIYIISTNVIAGIVPNMDLANSTAPFGLAFSHMFNPTVGKIIMALMVMSCVGSLLGWQFTIAQVFKSSADSGFFPKIFSKLSKADAPVKGMLTIVVIQSGLSLMTISPSLNKQFNVLVNLAVVTNIIPYILSMAALVIIQKVAKVPDNKARIANIIAGIGALYSFYALYSSGEEAMMWGAIATFLGWTLYGIVSPRFELAGKKG
>NZ_CP011642.1|WP_047729236.1|2099417_2101580_+|ornithine-decarboxylase-SpeF
MKKLKIAANTQTLGCFETERDIVDVHHSDFNDVAAIVLSVDDVTQGMLARIEEHGLNIPLFVAVCCEEELDNAVLPALHGVFELCGKNTQFYGKQLEAAAAKYESELLPPFFNTLTQYVEMGNATFACPGHQGGEFFRKHPAGRQFFDFYGETLFRSDMCNADVKLGDLLIHEGAPCAAQQHAAKVFNADKTYFVLNGTSASNKVATNALLTRGDLVLFDRNNHKSNHHGALIQAGATPVYLETARNPFGFIGGIDAHCFDERYLRQQIREVAPERANEARPFRLAIIQLGTYDGTIYNARQVVDKIGHLCDYILFDSAWVGYEQFIPMMKDCSPLLLELNENDPGIIVTQSVHKQQAGFSQTSQIHKKDRHIKGQSRYCNHKRFNNAFMLHASTSPFYPLFAALDVNAKMHEGKSGQRLWQECVRVGIEARKMLLDTCTMIKPFVPDQIDGKPWQAYDTAAMANDLRFFNFVPGEKWHAFEGYAESQYFVDPCKLLLTTPGIDTATGSYSEFGIPATILANYLRENGIVPEKCDLNSILFLLTPAEDIAKMQHLVALIARFEKHIEQNSLLSEVLPAVYKNHQQRYKNYTIRQLCQEMHDLYVSYDVKELQKEMFRKSYFPRVVMNPQDANTEFVRGNVELVSLAKAEGRIAAEGALPYPPGVLCVVPGEIWGGAAQRYFLALEEGINLLPGFAPELQGVYIQQDEDGWNRAYGYVMKN
>NZ_CP011642.1|WP_004933443.1|2099039_2099144_+|DUF2618-domain-containing-protein
MENNNRKMAHIRRTTHIMMMAHRSCFSFAFFNYR
>NZ_CP011642.1|WP_033648653.1|2098165_2098606_-|YhbP-family-protein
MNTPEQRQQIADFIGKQHVLTLCAGDGLDMWCANCFYVFDAAAMALWLMTEPHTRHGGLMLNNGRVVGTIAPKPKSIALIRGVQYRAEAVLLSGEEAEAARARYCKRFPIARAMKASVWRLDLHEVKMTDNTLGFGKKLHWARSIL
>NZ_CP011642.1|WP_033652768.1|2097502_2098135_-|NAD(P)H-binding-protein
MARALLVGATGLVGRELLQLLQSDPQITAIVAPTRTPLPPHGKLTNPVGDALFELLSSLQQPVDLVFCCLGTTRRAAGSADAFRYVDYQLVVESALTGRRLGAQHCLVVSALGANADSTFLYNRTKGEMEQALREQHWPRLTLVRPSMLVGDRPAPRLMERLTLPLFRLLPGKWRAVSAKDVAQTLLQQAFTPGEGVRVLESDRLHCYRG
>NZ_CP011642.1|WP_047729233.1|2096763_2097546_+|phosphonate-metabolism-protein-PhnP
MQLTFLGTGGAQQVPVFGCDCLICQRARREPAFRRRACSAMLNYQGETTLLDAGLPALERRFSAGQIQRFLLTHYHMDHVQGLFPLRWGCGNSIPVYGPPDEQGCDDLFKHPGILAFQPPLAPFATVELGGMRITPLPLQHSKLTHGYLIQAAGAALAYLTDTVGLPPATADYLQNVALDLLVLDCSLPPQPQAPRNHNDLTRAQETQRLLQPKRTLLTHISHHLDLWLLDNELPTGLELAFDHLSVSLGSSAADPTPAP
>NZ_CP011642.1|WP_015376431.1|2096148_2096751_+|phosphonate-metabolism-protein
MNDFAQPKIGDNVTLNRTRLGQYVHLADDAILEEVEMGDYSYTAGHNQIFYATIGKFVSIASYARINPGNHPTYQRIAQHHFTYRASEYGLGEDDAAFFDWRREHHVTVGHDVWIGHNAILMPGVSVGNGAVIGSAAVVTKDVEPYSIVAGVAAKKIGMRFDDALIERIERSQWWHWDHATLQARLADFRDINRFAQKYL
>NZ_CP011642.1|WP_047729230.1|2095582_2096152_+|ribose-1,5-bisphosphokinase
MARLIYLMGPSGAGKDSLLAALRADADSAPLVAHRYITRPADAGCENHIALSEPEFLRRRAKGLFALDWQAHQQHYAFGIEVDLWLLQGIDVAVNGSRAHLPQAQQRYGAQLLPVCLQVSAAILLRRLQDRGRESAEQIEQRLARAAEYQQSLPAGCRVLHNDGPLDDTLAALLALLPTATRQAQDATP
>NZ_CP011642.1|WP_047729239.1|2106902_2107406_-|N-acetyltransferase
MLIRVEIPVDAAGIDALLRRAFGRDDEADLVQQLREDGLLTLGVVATDDEGGVVGYAAFSPVDVAGEDRQWVALAPLAVDESLRRQGLAEKLVYEGLDSLNEFSYAAVVVLGDPVYYGRFGFKPAAAYGLHCRWPDTESAFQVYSLAEDALNGVSGEVAFSAPFNCF
>NZ_CP011642.1|WP_038879764.1|2107399_2107921_-|SCP2-domain-containing-protein
MLEQLRARLVRQGPSLLRIPLKFTPFALQRQLLQQVLSWQFRQALADGDLEFLESRWLKIEVRDLALQWFMTVENDKLVVSQHAEADVSFSGDANDLILIAARKQDPDTLFFQRRLQIEGDTELGLYVKNLMDAIELESMPAPLRMGLLQLADFVEAGLQEGTAPASRVAVSC
>NZ_CP011642.1|WP_015376422.1|2108179_2109175_+|U32-family-peptidase
MELLCPAGNLPALKAAVDNGADAVYIGLKDDTNARHFAGLNFTEKKLQEAVDYVHRHGRKLHIAINTFAHPDGYARWQRAVDMAAQLGADALILADLAMLEYAAQRYPQLERHVSVQASATNEEAIRFYQRNFEVGRVVLPRVLSMHQVKQLARTSPVPLEVFAFGSLCIMAEGRCYLSSYLTGESPNTVGACSPARFVRWQQTPQGMESRLNDVLIDRYQDHENAGYPTLCKGRYLVDDVRYHALEEPTSLNTLELLPELLAANIASVKIEGRQRSPAYVSQVARVWRQAIDRCQADPAAYRADAAWMETLGAMSEGTQTTLGAYHRKWQ
>NZ_CP011642.1|WP_038879107.1|2109186_2110065_+|U32-family-peptidase
MKYALGPVLYYWPKNDIATFYQQAADSSADIIYLGESVCAKRREMKVGDWLALAREIAHSGKQVVISTLALLQAPSELNELKRYVENGEFLFEANDLGAVNMAAERGLPFVAGHALNSYNAYTLRLLRRQGMIRWCMPVELSRDWLANLLTQCDELGFRHDFEVEVLSYGHLPLAYSARCFTARSENRGKDECETCCIKYPQGRMMRSQEQQQVFVLNGIQTMSGYCYNLGNELPNMQGLVDIVRLSPQGAETLAQIDAFRANERGEQPLTLTDHADCNGYWRRVAGLELVS
>NZ_CP011642.1|WP_038879110.1|2110275_2111541_+|aminopeptidase-P-family-protein
MLTRPEPLSLAERDRRWQLARDIMQTEDLAALIVYGDREAAAPAGFAPDCYFTNDRPGSIVVFVGDESPRIYTFASMMVADHLQASLRGDLQWIGAEQLFVGKTGRDVGAWLAERRLAGTRIGIIGLEPYPPFYFDGAMPARTLQGLTEALPTANWIPVYREFFRRASVKSEEELRLVRYAAHIGETMSETLRATARPGVSEADLVAAVTATCFSMGGYTAELLLGSGPEYVGWGPPAWQYRAQAPRVLQEGDLVLSEIFALYGMMETQHQAAIAIGEVHPDILHAAAIARASYEAGLGALRTGNTFGDVVDAMEQPLLAAGCWHVHPLIHSLNPYGPVGFGTAPGIESLPEAARYAQLRRLPTVGRELPLQAGMCFAFEPSCAFGRHMANLGGTVLVGETGGVALNENSTRLMFAGGSHR
>NZ_CP011642.1|WP_038879112.1|2111559_2112195_+|DUF1956-domain-containing-protein
MQNQDRLNERTRETQERLIRAGLSLFSKHGLEGVRTRQLAEAAGVNQSAIPYHFGGKEGVYLAVLEHVAGSIVAHLALPRRLLAGQTPAEALRTLMQDFVTALLGSETSAASSLLLAREQLQPSADFDALHTCLFSPLHHTVSELVTAIRSDQPDLKENILRAHAVLGQALSFAVAREALLRRLGENALSPQEIAQIATLVGTMSVAAAQG
>NZ_CP011642.1|WP_038879115.1|2112210_2113350_-|ABC-transporter-permease
MKLYWQTFVKVLLGMLERPVWLMLILSLCIMSMVYANRTVWDLPVGVVDQDHSTASRQLIRQLDATSKIAIETYDSLEQAQRDLSWRKLFAVIIMPVDLEKKILSGQNIVVPVYGDATNRLANGQIQQDVVAAYQQLLTEYNNGLLLRSGFSERQAQILLTPILGQTLDVFNPGISFAAIIFPGLLVMLLQHSLLIACIRVNIAMKSMPGGKAPLAAHLGGLTALLPIWLFLSIVLFVLWPWVLGYRQTANIAELLLLTFPFLLAVLGLGKLVTECLRSVEMIYLTLAFITTPIFYLSGTIWPLQSMPAWVRAISYSIPSTWGTKAIAGVNQMGLSLNEVWGDVVMMLILGVVYTLLGFGVAFLRNSVALRGMFRKRRA
>NZ_CP011642.1|WP_038879118.1|2113346_2114501_-|ABC-transporter-permease
MAMERVRAGWRCFSHAFDKECRVAFRSPVVHWLSWIFPLILFALISSNFSEGTLLDLPVSVVDSDHSPLSKSLTRRLDAGSHAHVEAYGGGLPESLSRLRSAQDYALLYIPPDLEANALSGKQPSVVMYYNALFYGAGLYSTQDFGGLMNEINANTRSIIATEMGKTLPPLADVTLSYGSLFNASGSYIYYQQFAATIHLLQLFAVTCMIYVLARSKSLLQAKPFSLALLGKLAPYTLCFTTLLMVEIAALVGIFDARVSGNPLFMLLIGLFYVMAAQSIGLLLYTFTGSTITAYSLIGILVSIAMTFSGMAVPELSMPLPARIISNIEPLTHALYAMFDVFLRQVHASAIFSVCALLAVYPLVAALLVRNRLPARLEKEGNAG
>NZ_CP011642.1|WP_033638900.1|2114482_2115454_-|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit
MKKKTLFTLLLMLAAIALAILFRAHNQDLLLQGEVDAPEVIVASKAKGRVVERLIERGDDVKSGQLIIQLDSPELMAQLRSAQATRDEAKAQLELSLHGTREESIRNLRANLAQAEAQYRNAQNDYNRNLSVAGKGYISKSELDASRRSRDTAFQQVQAAKANLDEGINGDRVEQRQQYAAALRAAEENLLQIQAQSDDLQVKAPVDGEVGPIPAEVGELLNAGSPLVTLIRVPDAYFVFNLREDILAHVRKGDKVKLRVPALKDKMIDTEVRYIAPLGDYATKRATRATGDFDLKTFEVRLYPSQPVDGLRPGMSTLWQWKE
>NZ_CP011642.1|WP_038879121.1|2115672_2116698_+|LLM-class-flavin-dependent-oxidoreductase
MDDVMTENTAVPLSVLDLSPIPQGAKARDAFHCSLDLAQHAERWGYRRYWLAEHHNMTGIGSAATSVLLGYLAAGTQSIRLGSGGVMLPNHAPLVIAEQFGTLESLYPGRIDLGLGRAPGTDQRTMMALRRHLSGDVDTFPRDVQELQNYFCDAQPGQPVQAVPGQGLHVPLWLLGSSLYSAQLAAQLGLPFAFASHFAPDMLFQALQLYRENFKPSKQLAQPHAMVCVNVVAADSDSDARFLFSSMQQQFINLRRGSPGPLPPPVDNIHALWTAGEQYGVEQALRMSIVGDEKTVRHGLQTLLRETDADEIMVNGQIFDHQARLRSFEIVAGVQGDVVKG

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Crispr_ID: NZ_CP011642_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011642_3

5203085-5203192

Orphan

Consensus_repeat	Method
CGATTGGGTTAAGGATACATTCAGGATCAATCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP011642_3

>merge|NZ_CP011642|3|5203085-5203192|CRISPRCasFinder
CGATTGGGTTAAGGATACATTCAGGATCAATCTGCCATTCAGTGACAAGGTAGAGGAGTGGGGAAAATCCGCTCACGATTGGGTTAAGGATACATTCGGGATCAATCT

>NZ_CP011642|3|3|5203085-5203192|CRISPRCasFinder
CGATTGGGTTAAGGATACATTCAGGATCAATCT	GCCATTCAGTGACAAGGTAGAGGAGTGGGGAAAATCCGCTCA
CGATTGGGTTAAGGATACATTCGGGATCAATCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011642.1\|WP_053056873.1\|5210201_5210762_+\|tail-assembly-chaperone	unknown	unknown	gnl\|CDD\|367075
NZ_CP011642.1\|WP_038875751.1\|5197489_5197960_+\|DUF4054-domain-containing-protein	unknown	unknown	gnl\|CDD\|372538
NZ_CP011642.1\|WP_047730612.1\|5195627_5196110_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011642.1\|WP_047730624.1\|5206849_5208082_+\|bacteriophage-protein	unknown	unknown	gnl\|CDD\|377414
NZ_CP011642.1\|WP_047730618.1\|5201239_5201644_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011642.1\|WP_038875737.1\|5200802_5201240_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011642.1\|WP_047730621.1\|5203858_5204665_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011642.1\|WP_053056872.1\|5208687_5210199_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011642.1\|WP_047730615.1\|5198436_5198802_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011642.1\|WP_047730613.1\|5196109_5197138_+\|DUF2184-domain-containing-protein	unknown	unknown	unknown
NZ_CP011642.1\|WP_047730616.1\|5198786_5199338_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011642.1\|WP_038875867.1\|5206496_5206853_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011642.1\|WP_047730623.1\|5205810_5206488_+\|oxidoreductase	unknown	unknown	gnl\|CDD\|375779
NZ_CP011642.1\|WP_038875748.1\|5197960_5198440_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011642.1\|WP_038875720.1\|5204963_5205809_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011642.1\|WP_047730614.1\|5197141_5197486_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011642.1\|WP_047730622.1\|5204664_5204967_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011642.1\|WP_047730617.1\|5199318_5200803_+\|DUF3383-domain-containing-protein	unknown	unknown	gnl\|CDD\|371768
NZ_CP011642.1\|WP_047730626.1\|5210758_5211679_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|284747
NZ_CP011642.1\|WP_047730625.1\|5208098_5208686_+\|DUF2612-domain-containing-protein	unknown	unknown	gnl\|CDD\|371354

Protein	Function_ID	Function_description	E-value
NZ_CP011642.1\|WP_053056873.1\|5210201_5210762_+\|tail-assembly-chaperone	gnl\|CDD\|367075	pfam02413, Caudo_TAP, Caudovirales tail fibre assembly protein, lambda gpK. This family contains bacterial and phage tail fibre assembly proteins. E.coli contains several members of this family although the function of these proteins is uncertain. Using the lambda phage members as examples, there are both gptfa and gpK tail proteins here. GpK forms part of the TTC or tail-tip complex that is located at the distal end of the tail. TTCs form the platform on which the tail-tube proteins self-assemble and are also the attachment point for fibers or receptor-binding proteins that mediate phage-adsorption to the surface of the host cell. TTC assembly starts with gpJ, which is also known as the central tail fibre and is involved in host-cell adsorption. It is the C-terminus of gpJ that interacts with the lamB receptor on host cells. A number of intermediates including gpK then interact with gpJ during tail morphogenesis.	7.51905e-19
NZ_CP011642.1\|WP_038875751.1\|5197489_5197960_+\|DUF4054-domain-containing-protein	gnl\|CDD\|372538	pfam13262, DUF4054, Protein of unknown function (DUF4054). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and viruses. Proteins in this family are typically between 120 and 152 amino acids in length.	3.47647e-24
NZ_CP011642.1\|WP_047730624.1\|5206849_5208082_+\|bacteriophage-protein	gnl\|CDD\|377414	pfam04865, Baseplate_J, Baseplate J-like protein. The P2 bacteriophage J protein lies at the edge of the baseplate. This family also includes a number of bacterial homologs, which are thought to have been horizontally transferred.	4.52769e-10
NZ_CP011642.1\|WP_047730623.1\|5205810_5206488_+\|oxidoreductase	gnl\|CDD\|375779	pfam18352, Gp138_N, Phage protein Gp138 N-terminal domain. This domain is found in the N-terminal domain of gene product 138 (gp138) in an unidentified bacteriophage. Gp138 is thought to be involved in the process of opening the host cell membrane during infection. The domain has an OB-fold with an intramolecular disulfide bond between C114 and C120.	1.14851e-08
NZ_CP011642.1\|WP_047730626.1\|5210758_5211679_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|284747	pfam07395, Mig-14, Mig-14. This family contains a number of bacterial mig-14 proteins (approximately 270 residues long). In Salmonella, mig-14 contributes to resistance to antimicrobial peptides, although the mechanism is not fully understood.	1.30994e-60
NZ_CP011642.1\|WP_047730617.1\|5199318_5200803_+\|DUF3383-domain-containing-protein	gnl\|CDD\|371768	pfam11863, DUF3383, Protein of unknown function (DUF3383). This family of proteins are functionally uncharacterized. This protein is found in bacteria and viruses. Proteins in this family are typically between 356 to 501 amino acids in length.	1.47484e-144
NZ_CP011642.1\|WP_047730625.1\|5208098_5208686_+\|DUF2612-domain-containing-protein	gnl\|CDD\|371354	pfam11041, DUF2612, Protein of unknown function (DUF2612). This is a phage protein family expressed from a range of Proteobacteria species. The function is not known.	1.02069e-69

>NZ_CP011642.1|WP_047730618.1|5201239_5201644_+|hypothetical-protein
MARKETFITIDAAGRDQGKVFYIKEMSASQAEWWALRALMAMGRGGVEIPDNLRSMGIAAMAVEGLKAISKIHPDEAKPLLDELMTCVQAVPNPADKTVVRPLIEADIDEVATRLNLSAEVFKLHVDFFATAGR
>NZ_CP011642.1|WP_038875737.1|5200802_5201240_+|hypothetical-protein
MSNTITSADAIITLSVMNLYPSGVQLQGFAADNIYGTDALSLAETVRGADGKLSAGFIYGNINQTIYIMPDSESRDVFDTWATTSRASVAVFRCNATVILPALKRKYKCVNGVLKQWKALPDAGRILQASQAIIEWESITPEAFN
>NZ_CP011642.1|WP_047730617.1|5199318_5200803_+|DUF3383-domain-containing-protein
MAIPISKDVKIKPGVLSAVGNAVDLNGLLLTDSPYVPIGDVPSFSSPSSVADYFGGNSDEYVMASMYFQGYNNATKSPGALLFARFNRAPAAAWLRSGSFKGVTVEKLKKISGTLTISISGKNASAEVNFSAVTSFAEAAAALQTSLTAAVATVVYDTTHNAFIITAAGAKPEATTIAYATGTAAAPMKMTSDLGAKISQGAPVAVVPALFTAIIAKSQQWASFSTVFECKDDEHLALSAWASAQEERFFYVAWTTNEKARITGNQDHIAYKIITVNNYGSVVPVFCTHVKKPASVLGYAAALDFTRTEGRVPFKFREYNGLAADVTSGDEYDVLIANGYNFYGKYAANNIVEDYWADGSITGDFKWLDSFAGQIWLNANLQGAVLALFKSNKTIPYNNAGRALVATSMTDVIEQFKAWGGIRAGVTLSAAQKLEISNAVGEDVSATIFATGYYLYVGEMLPALRPARTSPNCALWYSDGGSIQKLNIASTEVQ
>NZ_CP011642.1|WP_047730616.1|5198786_5199338_+|hypothetical-protein
MSANVTLSITESDLYKALGDFLQGLFVDAQIERTQQNGVPMPQGEFIAMTSLNSAGLSTAVVKYTPPPAAGMGTQHITRTTRWECQLDFFGDSAERNSLMFATLIRSEFGTSAFRCSGGVLTPLYCSDPRQTTMINGEWQYEPRWTLEFIAQIKPVVSAPLAFFDNVTIKTTTTESIDGNSNQ
>NZ_CP011642.1|WP_047730615.1|5198436_5198802_+|hypothetical-protein
MNLHGIVSRAVGAVNPFVEAQIYRSLGAEKREDYSRAPAYDAPIPMMVQKQAVTQGDTRHLDNLNIQGVFTSIYTNGNWCGVSRPKQVGGDKFVIAGETWLVVAVPENWPDWTRVVACLQT
>NZ_CP011642.1|WP_038875748.1|5197960_5198440_+|hypothetical-protein
MGASVRGGAAFKARLAQIADGLSSGKSLKVGFLADATYEDGTPVALVAAANEFGKMVMTKAGESYFQLPRPFFRNMISANSAQWPGEFSQLIRSSNYDARLALGLMGERIKSQLQDSIRELNSPPLAESTIKRKGFDKPLVDTGHMQNSVDYAVDGGDE
>NZ_CP011642.1|WP_038875751.1|5197489_5197960_+|DUF4054-domain-containing-protein
MGAVVFNIKAFRALYPAFATGCGSAPSDDLLEALFNQASTLYLDNTDESKVQDLKEREQLFFLLVAHLCALRGFGSGQSGGQGSGLVGRITSASEGSVSVSVDSAGSNDQSWWYLQTPYGADYWQATAPYRTMVYHPGSSPSRYPDHYYRPVRRGR
>NZ_CP011642.1|WP_047730614.1|5197141_5197486_+|hypothetical-protein
MAEQVTVGCKLPNGLVLEVDGHQQAVAGYRGEDVRIIGGYGLTPVDKELWDAWLKIHKDQPYVKNGVIFAQENGNSARAQAKEQEKLTSGLDPLPQNNPAPGIKRDDEAMNKEE
>NZ_CP011642.1|WP_047730613.1|5196109_5197138_+|DUF2184-domain-containing-protein
MNKFKQHYATASRDYGIILPGAQAYLPPEYASDFALAMDAQPNLVTVSNSGVPAYFTNYVDPELIRVLVTPMKAAQILGETKKGDWTTLTTQFPIVESAGDTSSYGDYNNNGMVTANANWVPRQSYHYQTHTRWGERELDMYGAARIGWAAELNVASALVLNKFQNKSYFYGIEGLQNYGLLNDPSLSAPITPIDVGGKLKWGDKDAEAIYNDIVKLYKQLVSQTKGHVERTDAMKLNMSPLSEANLTKTNQYKVNVADLLQKNFPGMTIETAVEYSSDAGEVVQLIAERLGENDTGYCAFTEKMRAHAVVTESSAWHQKKSAGTWGAIIRQPLAYAQMLGV
>NZ_CP011642.1|WP_047730612.1|5195627_5196110_+|hypothetical-protein
MSRFQTSINQYPAPGIEGAFASNNPYTSYVASEGALVTGADGLTIGRFAWVVKGVASNKGTGAPSGFVPRDGQASIVKWLGAASNVIQPGRECTLHTGGDYWAVTTTAATVGQKVFASLTTGEIATGAAGATIEGFAETAFSVASAAAAKERIKISTWSK
>NZ_CP011642.1|WP_047730621.1|5203858_5204665_+|hypothetical-protein
MRFSLNQATVLNAVRGGGLLSVVNSVLAPGYGIYYASGASVGTKPFSPTSFVVIEVGGEASITTAPIERGGYTSFNKVQRPAELHITFTVEGWTGFSGGLPNLTNLTLTSRSDVLATLETMRTTAEVYDIETPDKTYSSYDLTKYDYRIRSDGGPTLLTVTAVFQDVQDVAEVTVSSETSQADTTNNQITQGASAKTELVTSSTSGSTLSDVKKAISGVQRSASELVGNIADKVSSAVEDVTKPLGEVTVSATQKLDAAVKQLAGSLT
>NZ_CP011642.1|WP_047730622.1|5204664_5204967_+|hypothetical-protein
MLEIVLKPLKSQRFTVSLNNQACEIRLAQRTTGLYIDLTVNGTPCLQGVLCLNGNKIVRYGYLPFAGELFFADLAGNADPEWSGLGERFKLYYLAPEEMP
>NZ_CP011642.1|WP_038875720.1|5204963_5205809_+|hypothetical-protein
MSYQQRDIRVEFTLAEGRTFDDRGNVLTVKNARCYISLAAYGGIAGTQITLYLWGLVAQQMAALSYKGIWIDGAKPNRIRVWAADRLIFEGFISDAYADYNQAPDVPLIITANMMFYLRAKKVSPFSAKGPVSIDDILMPMASSVGLKYENQGVKRTLPDPYFQGDITQQMIEAARAVDAEIDINVEKVTIWPKGVSRKEPALFVSPDHGLIGYPIFTNVGLSISCLFCPDIFIGRKLSLVTSLPNASGRYAVLGAMHTLTSWIEGGQCSTSCELLRQPGG
>NZ_CP011642.1|WP_047730623.1|5205810_5206488_+|oxidoreductase
MENFHVNGSDLNGDINAQDFVMRQFLGRHAFITLGRVINANGEHVDIRPMVMAVAGDGSPIPHEVIYNVPVWRLQGGQSAVIMPPKAGDIGFIAICDRDISGVKATRQPAMPGSRRTHSLSDAIYLGGVLNGDPVQFVEFADQQINVTSPWKITLNAPDVETNASKRFAVNSPEIALNGATEVSQKFTAKGKAELSAGATISGIEFGDHVHGGVQSGSAQTNKPQ
>NZ_CP011642.1|WP_038875867.1|5206496_5206853_+|hypothetical-protein
MQTRSLLLDTNTWDLMLDDKGNLAVTDNPYAVAQDVACACSTFLGECWYDNTLGIPYYPRILGHWPGTQLINTKMQQEAMKLPTVSSALCTAVSDGDRRIGGVMTITDTNFNDYTVLL
>NZ_CP011642.1|WP_047730624.1|5206849_5208082_+|bacteriophage-protein
MTDENTNYTTAVPAVTFSKTGLLVPDEVDILNGRLTDFSTALGSSMGTSLTSPQGQLAMSDSAIIADKNDQLLAIANQVNADYSSGRFQDAIGRVYFLDRIGATGTTVTGTCSGLVDTLIPAGSLAQDEAGYLYASLSDATIGAAGSVDVVFQNLTTGPIGCPIGALSKVYKAIPGWSGVTNRAAGVPGNNEESRADFEHRRRNSVANNARNTLNAIRGEILAKVPNVVDVYVTHNPTPVDRQVGPSKYTLKKNSFYVGVYGGKAEDIADAIWRKAPPGVDMNGDSSYTIADTDGYEPPYPEYVITWQGLKPVSVSVRVILRKSEYLPSDITDQVKSKVIAAFNGADGGNRARAAAALAAGRFYAGIYSIDPSNIDILSLALSRNGNAFSSSLQFGIDEIPTLDPNNISV
>NZ_CP011642.1|WP_047730625.1|5208098_5208686_+|DUF2612-domain-containing-protein
MQNVAATVLAQYAASPRLNALIGSFNEAVSPEKFVDDFYDLIWNIKTAETYGLDVWGKIVDVSRRLTVDDDFNYLGFSEARLDTPTRTDPRPFDQAPFYSGESTTQTIELADPIYRRLIMMKAMSNITDCSIPNINRMLRYMFGDRGRAYIKNDGGMKMSYVFEFKLSTAELAIVQSSGALPAPPGINVSIIQKA
>NZ_CP011642.1|WP_053056872.1|5208687_5210199_+|hypothetical-protein
MKLTDKPRQIAVPFASGTADKNTIPNNATQETKEKGKAAYDSGFPPLTMTAFAAGGIPPHGKDFNGLLNDITVAIRFSQAGGQYTFDSAFTSAIGGYPRGAMVLSSDGSKIWWNTVDSNTTDPDGASAAGWKNLLADPNGLFLQKSQNLADLQNKAEGRKNLELGTAATKNVGTGSGNVMEMGTAGLGVGPIAKNDAYSNIAQFYRVNASAANKPPAVSGNVSAGVVCLPMDAAPSSGYVAVVGGNMAAYVGVSQAEAGGITWARIYTDKFKPTAADINAVAKAGDTMTGQLFTPAVATTPGAIPWGAGAFSEQLNTQAPFFQPNWQWPVSSGGLYVPIAKGVATRQGQGYPSAVSFGYLLGGTPSFAQACIHVKGDNADYNWKFDSNSGNFYCPGGVYANNAIFHVDGNITGSIWGGYLSNWLNQNISNAQNNAQNWAYQNLVQNVRLTGRINRPDTGGQIRVPDGCVFTGMSGANYDPSIWASYSYVQVLINGSWRNIGTS
>NZ_CP011642.1|WP_053056873.1|5210201_5210762_+|tail-assembly-chaperone
MVKFENFTIYKPEFKSTEEDEPEYRPDILYARDENGRDWYDCQADFSSDTLKVMYDENGVIVCISKDVTAIFPPGFSVAEVAISETPPEACNDMTWVYRGGRVIKRIYSPAEKRKMVQGEKERRIARVNQVTQTLNSKLLLGMATDEEKAKLRIWMDYVNEIEKISDDADPEKIVWPGRGLPGSLV
>NZ_CP011642.1|WP_047730626.1|5210758_5211679_-|GNAT-family-N-acetyltransferase
MIRKFISYATGWRIGTAEEYRKCYSLYGGSFVTHPDVLSFMQRQLNLRHKYYIKRDSNGSLLGGMCTNGRKEIAIVGRQSKKIGIDMFPFNKDEMILPISSSVKTVIPYRSKILSSLNGRSTLNSTFSLNSQREICLAKTCGKGGYSSSTKNSRNRELKKFLNSGGEVVDQALLTPVQIVDIYFELYAKRWGHEPGNKRQMMEMITSLREMIFGFVLFYNGKPCAFQLITRADSPEWICFDYVNGGYDREHNGFCPGTIVTWLNVRAAYELCEREGKEMRYSFGKPTEAYKDRWCERAPLGRTLSI

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Identity
NZ_CP011642_2	2.14\|2105519\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2105519-2105550	32	NZ_CP011642.1	3777692-3777723	1.0
NZ_CP011642_2	2.20\|2105885\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2105885-2105916	32	NZ_CP011642.1	3775939-3775970	1.0
NZ_CP011642_2	2.29\|2106436\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2106436-2106467	32	NZ_CP011642.1	3785269-3785300	1.0

1. spacer 2.14|2105519|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to position: 3777692-3777723, mismatch: 0, identity: 1.0

ctaaaatggcatggacacaatcttgcccaata	CRISPR spacer
ctaaaatggcatggacacaatcttgcccaata	Protospacer
********************************

2. spacer 2.20|2105885|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to position: 3775939-3775970, mismatch: 0, identity: 1.0

cgtttcagcagatccacattgccgtaaagctg	CRISPR spacer
cgtttcagcagatccacattgccgtaaagctg	Protospacer
********************************

3. spacer 2.29|2106436|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to position: 3785269-3785300, mismatch: 0, identity: 1.0

atctggcgctgcgccggcgtcatggccacggc	CRISPR spacer
atctggcgctgcgccggcgtcatggccacggc	Protospacer
********************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP011642_2	2.21\|2105946\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2105946-2105977	32	MT843275	Serratia phage vB_SspM_BZS1, complete genome	33229-33260	1	0.969
NZ_CP011642_2	2.28\|2106374\|33\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2106374-2106406	33	NC_048758	Serratia phage Parlo, complete genome	28180-28212	1	0.97
NZ_CP011642_2	2.30\|2106497\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2106497-2106528	32	NZ_CP018921	Serratia marcescens strain UMH7 plasmid unnamed4, complete sequence	12787-12818	1	0.969
NZ_CP011642_2	2.33\|2106680\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2106680-2106711	32	NC_048758	Serratia phage Parlo, complete genome	27704-27735	1	0.969
NZ_CP011642_2	2.1\|2104726\|32\|NZ_CP011642\|CRT	2104726-2104757	32	NZ_AP019010	Serratia marcescens strain AS-1 plasmid pSERAS01, complete sequence	40531-40562	2	0.938
NZ_CP011642_2	2.1\|2104726\|32\|NZ_CP011642\|CRT	2104726-2104757	32	NZ_CP053380	Serratia marcescens strain FY plasmid p2, complete sequence	28576-28607	2	0.938
NZ_CP011642_2	2.1\|2104726\|32\|NZ_CP011642\|CRT	2104726-2104757	32	NC_015972	Serratia marcescens strain B-6493 plasmid pSM22, complete sequence	17308-17339	2	0.938
NZ_CP011642_2	2.1\|2104726\|32\|NZ_CP011642\|CRT	2104726-2104757	32	CP041234	Serratia marcescens subsp. marcescens ATCC 13880 plasmid pATCC, complete sequence	8032-8063	2	0.938
NZ_CP011642_2	2.3\|2104848\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2104848-2104879	32	NZ_CP018921	Serratia marcescens strain UMH7 plasmid unnamed4, complete sequence	4716-4747	2	0.938
NZ_CP011642_2	2.1\|2104726\|32\|NZ_CP011642\|CRT	2104726-2104757	32	NZ_CP033894	Serratia liquefaciens strain FG3 plasmid p1-159, complete sequence	4731-4762	3	0.906
NZ_CP011642_2	2.1\|2104726\|32\|NZ_CP011642\|CRT	2104726-2104757	32	NZ_CP013047	Serratia marcescens strain B3R3 plasmid unnamed1, complete sequence	109271-109302	3	0.906
NZ_CP011642_2	2.1\|2104726\|32\|NZ_CP011642\|CRT	2104726-2104757	32	NZ_CP041133	Serratia marcescens strain WVU-009 plasmid pWVU-009, complete sequence	63328-63359	3	0.906
NZ_CP011642_2	2.1\|2104726\|32\|NZ_CP011642\|CRT	2104726-2104757	32	NZ_LT575491	Serratia marcescens isolate PWN146_assembly plasmid PWN146p1, complete sequence	41186-41217	3	0.906
NZ_CP011642_2	2.1\|2104726\|32\|NZ_CP011642\|CRT	2104726-2104757	32	NZ_LT575491	Serratia marcescens isolate PWN146_assembly plasmid PWN146p1, complete sequence	98781-98812	3	0.906
NZ_CP011642_2	2.1\|2104726\|32\|NZ_CP011642\|CRT	2104726-2104757	32	NZ_CP027301	Serratia marcescens strain SGAir0764 plasmid unnamed_1	2792-2823	3	0.906
NZ_CP011642_2	2.1\|2104726\|32\|NZ_CP011642\|CRT	2104726-2104757	32	NZ_CP003425	Serratia sp. SCBI plasmid SCBI_Pl, complete sequence	11399-11430	4	0.875
NZ_CP011642_2	2.1\|2104726\|32\|NZ_CP011642\|CRT	2104726-2104757	32	NZ_CP041128	Serratia marcescens strain WVU-005 plasmid pWVU-005-2, complete sequence	52216-52247	4	0.875
NZ_CP011642_2	2.4\|2104909\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2104909-2104940	32	NZ_CP026306	Streptomyces lunaelactis strain MM109 plasmid pSLUN2, complete sequence	43429-43460	5	0.844
NZ_CP011642_2	2.20\|2105885\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2105885-2105916	32	NC_047854	Cronobacter phage ESSI-2, complete genome	8886-8917	6	0.812
NZ_CP011642_2	2.29\|2106436\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2106436-2106467	32	NZ_CP044073	Pseudomonas oryzihabitans strain FDAARGOS_657 plasmid unnamed2, complete sequence	52775-52806	6	0.812
NZ_CP011642_2	2.29\|2106436\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2106436-2106467	32	NZ_LR134447	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 5, complete sequence	236009-236040	6	0.812
NZ_CP011642_2	2.1\|2104726\|32\|NZ_CP011642\|CRT	2104726-2104757	32	MH622910	Caudovirales sp. isolate ctdb_3, complete genome	15050-15081	7	0.781
NZ_CP011642_2	2.3\|2104848\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2104848-2104879	32	NZ_CP030762	Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed2, complete sequence	152539-152570	7	0.781
NZ_CP011642_2	2.4\|2104909\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2104909-2104940	32	MN693609	Marine virus AFVG_250M479, complete genome	52019-52050	7	0.781
NZ_CP011642_2	2.12\|2105397\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2105397-2105428	32	NZ_CP030828	Neorhizobium sp. NCHU2750 plasmid pNCHU2750a, complete sequence	322753-322784	7	0.781
NZ_CP011642_2	2.29\|2106436\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2106436-2106467	32	NC_014309	Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome	1202464-1202495	7	0.781
NZ_CP011642_2	2.29\|2106436\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2106436-2106467	32	NZ_CP011808	Pandoraea faecigallinarum strain DSM 23572 plasmid pPF72-1, complete sequence	250105-250136	7	0.781
NZ_CP011642_2	2.29\|2106436\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2106436-2106467	32	NZ_CP011809	Pandoraea faecigallinarum strain DSM 23572 plasmid pPF72-2, complete sequence	9861-9892	7	0.781
NZ_CP011642_2	2.29\|2106436\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2106436-2106467	32	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	3778515-3778546	7	0.781
NZ_CP011642_2	2.30\|2106497\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2106497-2106528	32	NZ_KU963390	Escherichia coli strain ECO37 plasmid ECO37P2, complete sequence	22291-22322	7	0.781
NZ_CP011642_2	2.30\|2106497\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2106497-2106528	32	NC_011148	Salmonella enterica subsp. enterica serovar Agona str. SL483 plasmid, complete sequence	5609-5640	7	0.781
NZ_CP011642_2	2.32\|2106619\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2106619-2106650	32	NZ_CP019309	Phaeobacter inhibens strain DOK1-1 plasmid pDOK1-1-2, complete sequence	137931-137962	7	0.781
NZ_CP011642_1	1.1\|2104501\|31\|NZ_CP011642\|CRT	2104501-2104531	31	MK279898	Mycobacterium phage Cici, complete genome	51004-51034	8	0.742
NZ_CP011642_1	1.1\|2104501\|31\|NZ_CP011642\|CRT	2104501-2104531	31	NZ_CP045327	Mycobacterium sp. THAF192 plasmid pTHAF192_b, complete sequence	49433-49463	8	0.742
NZ_CP011642_1	1.3\|2104623\|31\|NZ_CP011642\|CRT	2104623-2104653	31	NC_022235	Sphingomonas sp. ERG5 plasmid pCADAB1, complete sequence	67743-67773	8	0.742
NZ_CP011642_2	2.1\|2104726\|32\|NZ_CP011642\|CRT	2104726-2104757	32	MH513976	Mycobacterium phage Morty007, complete genome	63297-63328	8	0.75
NZ_CP011642_2	2.1\|2104726\|32\|NZ_CP011642\|CRT	2104726-2104757	32	MK061414	Mycobacterium phage Marley1013, complete genome	63297-63328	8	0.75
NZ_CP011642_2	2.4\|2104909\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2104909-2104940	32	NC_047815	Erwinia phage vB_EamM_Yoloswag, complete genome	110964-110995	8	0.75
NZ_CP011642_2	2.13\|2105458\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2105458-2105489	32	KX912252	Pseudoalteromonas phage PHS3, complete genome	33729-33760	8	0.75
NZ_CP011642_2	2.27\|2106313\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2106313-2106344	32	MG710528	Escherichia phage GER2, complete genome	44034-44065	8	0.75
NZ_CP011642_2	2.29\|2106436\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2106436-2106467	32	NZ_CP010898	Pandoraea vervacti strain NS15 plasmid pPV15, complete sequence	15278-15309	8	0.75
NZ_CP011642_2	2.29\|2106436\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2106436-2106467	32	NZ_CP050105	Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b6, complete sequence	223225-223256	8	0.75
NZ_CP011642_2	2.29\|2106436\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2106436-2106467	32	NZ_CP025014	Rhizobium leguminosarum strain Norway plasmid pRLN2, complete sequence	141311-141342	8	0.75
NZ_CP011642_2	2.29\|2106436\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2106436-2106467	32	NZ_CP013525	Rhizobium phaseoli strain R744 plasmid pRphaR744c, complete sequence	96198-96229	8	0.75
NZ_CP011642_2	2.29\|2106436\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2106436-2106467	32	NZ_CP013554	Rhizobium phaseoli strain N931 plasmid pRphaN931b, complete sequence	93594-93625	8	0.75
NZ_CP011642_2	2.29\|2106436\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2106436-2106467	32	NZ_CP025508	Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvB, complete sequence	133161-133192	8	0.75
NZ_CP011642_2	2.29\|2106436\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2106436-2106467	32	NZ_CP013560	Rhizobium phaseoli strain N841 plasmid pRphaN841c, complete sequence	93278-93309	8	0.75
NZ_CP011642_2	2.29\|2106436\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2106436-2106467	32	NZ_CP013565	Rhizobium phaseoli strain N831 plasmid pRphaN831b, complete sequence	93594-93625	8	0.75
NZ_CP011642_2	2.29\|2106436\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2106436-2106467	32	NZ_CP050110	Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b4, complete sequence	223227-223258	8	0.75
NZ_CP011642_2	2.29\|2106436\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2106436-2106467	32	NZ_CP030764	Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed4, complete sequence	110048-110079	8	0.75
NZ_CP011642_2	2.29\|2106436\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2106436-2106467	32	NZ_CP022667	Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR2, complete sequence	504474-504505	8	0.75
NZ_CP011642_2	2.29\|2106436\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2106436-2106467	32	NC_010998	Rhizobium etli CIAT 652 plasmid pA, complete sequence	93270-93301	8	0.75
NZ_CP011642_2	2.29\|2106436\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2106436-2106467	32	NZ_CP050087	Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b5, complete sequence	133178-133209	8	0.75
NZ_CP011642_2	2.29\|2106436\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2106436-2106467	32	MK838113	Aeromonas phage LAh_7, complete genome	26299-26330	8	0.75
NZ_CP011642_2	2.30\|2106497\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2106497-2106528	32	MH920640	Synechoccus phage S-E7, complete genome	44177-44208	8	0.75
NZ_CP011642_2	2.30\|2106497\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2106497-2106528	32	MH920639	Synechoccus phage S-P4, partial genome	55891-55922	8	0.75
NZ_CP011642_2	2.32\|2106619\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2106619-2106650	32	NC_014035	Rhodobacter capsulatus SB 1003 plasmid pRCB133, complete sequence	42689-42720	8	0.75
NZ_CP011642_1	1.1\|2104501\|31\|NZ_CP011642\|CRT	2104501-2104531	31	MF919498	Mycobacterium phage Cindaradix, complete genome	51294-51324	9	0.71
NZ_CP011642_1	1.4\|2104501\|32\|NZ_CP011642\|CRISPRCasFinder	2104501-2104532	32	NZ_CP045327	Mycobacterium sp. THAF192 plasmid pTHAF192_b, complete sequence	49433-49464	9	0.719
NZ_CP011642_1	1.6\|2104623\|32\|NZ_CP011642\|CRISPRCasFinder	2104623-2104654	32	NC_022235	Sphingomonas sp. ERG5 plasmid pCADAB1, complete sequence	67742-67773	9	0.719
NZ_CP011642_2	2.1\|2104726\|32\|NZ_CP011642\|CRT	2104726-2104757	32	NZ_CP031599	Roseovarius indicus strain DSM 26383 plasmid pRIdsm_01, complete sequence	225861-225892	9	0.719
NZ_CP011642_2	2.4\|2104909\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2104909-2104940	32	KY979132	Acidovorax phage ACP17, complete genome	62815-62846	9	0.719
NZ_CP011642_2	2.4\|2104909\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2104909-2104940	32	NC_049850	Burkholderia phage BcepSaruman, complete genome	100656-100687	9	0.719
NZ_CP011642_2	2.9\|2105214\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2105214-2105245	32	NZ_CP039900	Agrobacterium tumefaciens strain CFBP5877 plasmid pAtCFBP5877b, complete sequence	63619-63650	9	0.719
NZ_CP011642_2	2.9\|2105214\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2105214-2105245	32	NZ_CP039891	Agrobacterium tumefaciens strain CFBP5499 plasmid pAtCFBP5499b, complete sequence	63619-63650	9	0.719
NZ_CP011642_2	2.11\|2105336\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2105336-2105367	32	NZ_CP039900	Agrobacterium tumefaciens strain CFBP5877 plasmid pAtCFBP5877b, complete sequence	63619-63650	9	0.719
NZ_CP011642_2	2.11\|2105336\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2105336-2105367	32	NZ_CP039891	Agrobacterium tumefaciens strain CFBP5499 plasmid pAtCFBP5499b, complete sequence	63619-63650	9	0.719
NZ_CP011642_2	2.14\|2105519\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2105519-2105550	32	MN694729	Marine virus AFVG_250M1111, complete genome	13373-13404	9	0.719
NZ_CP011642_2	2.14\|2105519\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2105519-2105550	32	MN694290	Marine virus AFVG_250M636, complete genome	12065-12096	9	0.719
NZ_CP011642_2	2.18\|2105763\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2105763-2105794	32	NZ_CP046164	Vibrio sp. THAF191c plasmid pTHAF191c_c, complete sequence	252510-252541	9	0.719
NZ_CP011642_2	2.18\|2105763\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2105763-2105794	32	NZ_CP046067	Vibrio sp. THAF191d plasmid pTHAF191d_c, complete sequence	1009-1040	9	0.719
NZ_CP011642_2	2.18\|2105763\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2105763-2105794	32	NZ_CP031474	Vibrio coralliilyticus strain RE22 plasmid p337, complete sequence	147241-147272	9	0.719
NZ_CP011642_2	2.18\|2105763\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2105763-2105794	32	NZ_CP009266	Vibrio coralliilyticus strain OCN014 plasmid pOCN014, complete sequence	340702-340733	9	0.719
NZ_CP011642_2	2.18\|2105763\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2105763-2105794	32	NZ_CP009620	Vibrio coralliilyticus strain RE98 plasmid p319, complete sequence	21287-21318	9	0.719
NZ_CP011642_2	2.18\|2105763\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2105763-2105794	32	NZ_CP045357	Vibrio sp. THAF64 plasmid pTHAF64_b, complete sequence	327646-327677	9	0.719
NZ_CP011642_2	2.20\|2105885\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2105885-2105916	32	NZ_CP032687	Rhizobium sp. CCGE531 plasmid pRCCGE531b, complete sequence	367862-367893	9	0.719
NZ_CP011642_2	2.20\|2105885\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2105885-2105916	32	NZ_CP028348	Novosphingobium sp. THN1 plasmid pTHN, complete sequence	824560-824591	9	0.719
NZ_CP011642_2	2.20\|2105885\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2105885-2105916	32	NC_021909	Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1e, complete sequence	280167-280198	9	0.719
NZ_CP011642_2	2.20\|2105885\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2105885-2105916	32	NC_020061	Rhizobium tropici CIAT 899 plasmid pRtrCIAT899b, complete sequence	354734-354765	9	0.719
NZ_CP011642_2	2.24\|2106130\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2106130-2106161	32	NZ_CP050093	Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b5, complete sequence	371473-371504	9	0.719
NZ_CP011642_2	2.24\|2106130\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2106130-2106161	32	NC_008384	Rhizobium leguminosarum bv. viciae 3841 plasmid pRL11, complete sequence	538265-538296	9	0.719
NZ_CP011642_2	2.24\|2106130\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2106130-2106161	32	NZ_CP016287	Rhizobium leguminosarum strain Vaf10 plasmid unnamed1, complete sequence	443851-443882	9	0.719
NZ_CP011642_2	2.24\|2106130\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2106130-2106161	32	NZ_CP048282	Rhizobium leguminosarum bv. viciae 248 plasmid pRle248d, complete sequence	417816-417847	9	0.719
NZ_CP011642_2	2.29\|2106436\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2106436-2106467	32	NZ_CP013454	Burkholderia vietnamiensis strain MSMB608WGS plasmid pMSMB608, complete sequence	81134-81165	9	0.719
NZ_CP011642_2	2.29\|2106436\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2106436-2106467	32	NZ_CP007795	Azospirillum brasilense strain Az39 plasmid AbAZ39_p2, complete sequence	399695-399726	9	0.719
NZ_CP011642_2	2.29\|2106436\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2106436-2106467	32	NZ_CP011518	Pandoraea oxalativorans strain DSM 23570 plasmid pPO70-1, complete sequence	535019-535050	9	0.719
NZ_CP011642_2	2.29\|2106436\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2106436-2106467	32	NZ_CP016453	Sphingobium sp. RAC03 plasmid pBSY17_1, complete sequence	769119-769150	9	0.719
NZ_CP011642_2	2.30\|2106497\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2106497-2106528	32	HQ634189	Cyanophage Syn30 genomic sequence	146946-146977	9	0.719
NZ_CP011642_2	2.31\|2106558\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2106558-2106589	32	NZ_CP018096	Chelatococcus daeguensis strain TAD1 plasmid pTAD1, complete sequence	399994-400025	9	0.719
NZ_CP011642_1	1.1\|2104501\|31\|NZ_CP011642\|CRT	2104501-2104531	31	NZ_CP046903	Pseudomonas stutzeri strain PM101005 plasmid p1_PM101005, complete sequence	80460-80490	10	0.677
NZ_CP011642_1	1.4\|2104501\|32\|NZ_CP011642\|CRISPRCasFinder	2104501-2104532	32	MF919498	Mycobacterium phage Cindaradix, complete genome	51294-51325	10	0.688
NZ_CP011642_2	2.13\|2105458\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2105458-2105489	32	NC_008573	Shewanella sp. ANA-3 plasmid unnamed1, complete sequence	147511-147542	10	0.688
NZ_CP011642_2	2.13\|2105458\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2105458-2105489	32	KF929199	Staphylococcus phage vB_SepS_SEP9, complete genome	74369-74400	10	0.688
NZ_CP011642_2	2.14\|2105519\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2105519-2105550	32	MN694499	Marine virus AFVG_250M606, complete genome	8109-8140	10	0.688
NZ_CP011642_2	2.14\|2105519\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2105519-2105550	32	MG732930	Enterobacter phage Ec_L1, complete genome	44096-44127	10	0.688
NZ_CP011642_2	2.31\|2106558\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2106558-2106589	32	MF417939	Uncultured Caudovirales phage clone 7S_2, partial genome	7642-7673	10	0.688
NZ_CP011642_1	1.4\|2104501\|32\|NZ_CP011642\|CRISPRCasFinder	2104501-2104532	32	NZ_CP046903	Pseudomonas stutzeri strain PM101005 plasmid p1_PM101005, complete sequence	80459-80490	11	0.656
NZ_CP011642_2	2.32\|2106619\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2106619-2106650	32	NZ_CP049159	Caballeronia sp. SBC1 plasmid pSBC1_3, complete sequence	621026-621057	11	0.656
NZ_CP011642_2	2.32\|2106619\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2106619-2106650	32	NZ_CP049320	Caballeronia sp. SBC2 plasmid pSBC2-4, complete sequence	173179-173210	11	0.656
NZ_CP011642_2	2.29\|2106436\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2106436-2106467	32	NZ_CP032323	Azospirillum brasilense strain MTCC4035 plasmid p2, complete sequence	706456-706487	16	0.5
NZ_CP011642_2	2.29\|2106436\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2106436-2106467	32	NZ_CP032347	Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence	353153-353184	16	0.5

1. spacer 2.21|2105946|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to MT843275 (Serratia phage vB_SspM_BZS1, complete genome) position: , mismatch: 1, identity: 0.969

ttcgcccctaagcgccaccacggcaaacacct	CRISPR spacer
ttcgcccctaaacgccaccacggcaaacacct	Protospacer
***********.********************

2. spacer 2.28|2106374|33|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to NC_048758 (Serratia phage Parlo, complete genome) position: , mismatch: 1, identity: 0.97

gcctgagaacgatatcgttcgctcaaaagctga	CRISPR spacer
gcctgagaacgatatcgttcgctctaaagctga	Protospacer
************************ ********

3. spacer 2.30|2106497|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP018921 (Serratia marcescens strain UMH7 plasmid unnamed4, complete sequence) position: , mismatch: 1, identity: 0.969

ttacaatcaccgcacaagaggtttagtccagg	CRISPR spacer
ttgcaatcaccgcacaagaggtttagtccagg	Protospacer
**.*****************************

4. spacer 2.33|2106680|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to NC_048758 (Serratia phage Parlo, complete genome) position: , mismatch: 1, identity: 0.969

cagcaggatatcaacaagcgagcttccaaggc	CRISPR spacer
cagcaggatatcaacaagcgagcttctaaggc	Protospacer
**************************.*****

5. spacer 2.1|2104726|32|NZ_CP011642|CRT matches to NZ_AP019010 (Serratia marcescens strain AS-1 plasmid pSERAS01, complete sequence) position: , mismatch: 2, identity: 0.938

ttcgatggtgcgcgggttgtacagcgtgacac	CRISPR spacer
ctcgatggtgcgcgggttgtacagcgtgacgc	Protospacer
.*****************************.*

6. spacer 2.1|2104726|32|NZ_CP011642|CRT matches to NZ_CP053380 (Serratia marcescens strain FY plasmid p2, complete sequence) position: , mismatch: 2, identity: 0.938

ttcgatggtgcgcgggttgtacagcgtgacac	CRISPR spacer
ctcgatggtgcgcgggttgtacagcgtgacgc	Protospacer
.*****************************.*

7. spacer 2.1|2104726|32|NZ_CP011642|CRT matches to NC_015972 (Serratia marcescens strain B-6493 plasmid pSM22, complete sequence) position: , mismatch: 2, identity: 0.938

ttcgatggtgcgcgggttgtacagcgtgacac	CRISPR spacer
ctcgatggtgcgcgggttgtacagcgtgacgc	Protospacer
.*****************************.*

8. spacer 2.1|2104726|32|NZ_CP011642|CRT matches to CP041234 (Serratia marcescens subsp. marcescens ATCC 13880 plasmid pATCC, complete sequence) position: , mismatch: 2, identity: 0.938

ttcgatggtgcgcgggttgtacagcgtgacac	CRISPR spacer
ctcgatggtgcgcgggttgtacagcgtgacgc	Protospacer
.*****************************.*

9. spacer 2.3|2104848|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP018921 (Serratia marcescens strain UMH7 plasmid unnamed4, complete sequence) position: , mismatch: 2, identity: 0.938

caactcggcctgacgcaaaaagaattggcggc	CRISPR spacer
cagcttggcctgacgcaaaaagaattggcggc	Protospacer
**.**.**************************

10. spacer 2.1|2104726|32|NZ_CP011642|CRT matches to NZ_CP033894 (Serratia liquefaciens strain FG3 plasmid p1-159, complete sequence) position: , mismatch: 3, identity: 0.906

ttcgatggtgcgcgggttgtacagcgtgacac	CRISPR spacer
ctcgatggtgcgcgagttgtacagcgtgacgc	Protospacer
.*************.***************.*

11. spacer 2.1|2104726|32|NZ_CP011642|CRT matches to NZ_CP013047 (Serratia marcescens strain B3R3 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.906

ttcgatggtgcgcgggttgtacagcgtgacac	CRISPR spacer
ctcgatggtgcgcgggttgtacagtgtgacgc	Protospacer
.***********************.*****.*

12. spacer 2.1|2104726|32|NZ_CP011642|CRT matches to NZ_CP041133 (Serratia marcescens strain WVU-009 plasmid pWVU-009, complete sequence) position: , mismatch: 3, identity: 0.906

ttcgatggtgcgcgggttgtacagcgtgacac	CRISPR spacer
ctcgatggtgcgcgggttgtacaacgtgacgc	Protospacer
.**********************.******.*

13. spacer 2.1|2104726|32|NZ_CP011642|CRT matches to NZ_LT575491 (Serratia marcescens isolate PWN146_assembly plasmid PWN146p1, complete sequence) position: , mismatch: 3, identity: 0.906

ttcgatggtgcgcgggttgtacagcgtgacac	CRISPR spacer
ctcgatggtgcgcgggttgtacaacgtgacgc	Protospacer
.**********************.******.*

14. spacer 2.1|2104726|32|NZ_CP011642|CRT matches to NZ_LT575491 (Serratia marcescens isolate PWN146_assembly plasmid PWN146p1, complete sequence) position: , mismatch: 3, identity: 0.906

ttcgatggtgcgcgggttgtacagcgtgacac	CRISPR spacer
ctcgatggtgcgcgggttgtacaacgtgacgc	Protospacer
.**********************.******.*

15. spacer 2.1|2104726|32|NZ_CP011642|CRT matches to NZ_CP027301 (Serratia marcescens strain SGAir0764 plasmid unnamed_1) position: , mismatch: 3, identity: 0.906

ttcgatggtgcgcgggttgtacagcgtgacac	CRISPR spacer
ctcgatggtgcgcgggttgtacaacgtgacgc	Protospacer
.**********************.******.*

16. spacer 2.1|2104726|32|NZ_CP011642|CRT matches to NZ_CP003425 (Serratia sp. SCBI plasmid SCBI_Pl, complete sequence) position: , mismatch: 4, identity: 0.875

ttcgatggtgcgcgggttgtacagcgtgacac	CRISPR spacer
ctcgatggtgcgcgagttgtacagcgtgatgc	Protospacer
.*************.**************..*

17. spacer 2.1|2104726|32|NZ_CP011642|CRT matches to NZ_CP041128 (Serratia marcescens strain WVU-005 plasmid pWVU-005-2, complete sequence) position: , mismatch: 4, identity: 0.875

ttcgatggtgcgcgggttgtacagcgtgacac	CRISPR spacer
ctcgatggtgcgcgggttgtacaatgtgacgc	Protospacer
.**********************..*****.*

18. spacer 2.4|2104909|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP026306 (Streptomyces lunaelactis strain MM109 plasmid pSLUN2, complete sequence) position: , mismatch: 5, identity: 0.844

-gcggtaaaggctgcttcgtcgtcttcttcctc	CRISPR spacer
tgcgg-accggcttcttcgccgtcttcttcctc	Protospacer
 **** *  **** *****.*************

19. spacer 2.20|2105885|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to NC_047854 (Cronobacter phage ESSI-2, complete genome) position: , mismatch: 6, identity: 0.812

cgtttcagcagatccacattgccgtaaagctg	CRISPR spacer
cgctgtaacagcgccacattgccgtaaagctg	Protospacer
**.* .*.***  *******************

20. spacer 2.29|2106436|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP044073 (Pseudomonas oryzihabitans strain FDAARGOS_657 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.812

atctggcgctgcgccggcgtcatggccacggc-	CRISPR spacer
gcctggcgcagcgcctgcgtcatgg-cgcggcg	Protospacer
..******* ***** ********* *.****

21. spacer 2.29|2106436|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to NZ_LR134447 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 5, complete sequence) position: , mismatch: 6, identity: 0.812

atctggcgc---tgcgccggcgtcatggccacggc	CRISPR spacer
---cggcgcacgtgccccggcgtcacggccacggc	Protospacer
   .*****   *** *********.*********

22. spacer 2.1|2104726|32|NZ_CP011642|CRT matches to MH622910 (Caudovirales sp. isolate ctdb_3, complete genome) position: , mismatch: 7, identity: 0.781

ttcgatggtgcgcgggttgtacagc-gtgacac	CRISPR spacer
agcgatggtgcgcgggtcgttcagcggtggcg-	Protospacer
  ***************.** **** ***.*.

23. spacer 2.3|2104848|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP030762 (Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781

caactcggcctgacgcaaaaagaattggcggc	CRISPR spacer
gaaatgtgcctgacgaaaaaggaattggcgga	Protospacer
 ** *  ******** ****.**********

24. spacer 2.4|2104909|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to MN693609 (Marine virus AFVG_250M479, complete genome) position: , mismatch: 7, identity: 0.781

gcggtaaaggctgcttcgtcgtcttcttcctc	CRISPR spacer
ggaacatcggctgcttcgtcatcttcttcctc	Protospacer
* ...*  ************.***********

25. spacer 2.12|2105397|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP030828 (Neorhizobium sp. NCHU2750 plasmid pNCHU2750a, complete sequence) position: , mismatch: 7, identity: 0.781

cgacgaaatcagaaatccgctggctgcaatgc-	CRISPR spacer
cgacgaaatcagaaatctgcttgc-gcgctatc	Protospacer
*****************.*** ** **. *..

26. spacer 2.29|2106436|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to NC_014309 (Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome) position: , mismatch: 7, identity: 0.781

atctggcgctgcgccggcgtcatggccacggc	CRISPR spacer
aatggcggcggcgccggcgtcatggccacgga	Protospacer
* . *  ** *********************

27. spacer 2.29|2106436|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP011808 (Pandoraea faecigallinarum strain DSM 23572 plasmid pPF72-1, complete sequence) position: , mismatch: 7, identity: 0.781

atctggcgctgcgccggcgtcatggccacggc	CRISPR spacer
aagcggcgctgcgcctgcgtcatgtccacgcg	Protospacer
*  .*********** ******** *****

28. spacer 2.29|2106436|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP011809 (Pandoraea faecigallinarum strain DSM 23572 plasmid pPF72-2, complete sequence) position: , mismatch: 7, identity: 0.781

atctggcgctgcgccggcgtcatggccacggc	CRISPR spacer
aagcggcgctgcgcctgcgtcatgtccacgcg	Protospacer
*  .*********** ******** *****

29. spacer 2.29|2106436|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 7, identity: 0.781

atctggcgctgcgccggcgtcatggccacggc	CRISPR spacer
cgcagttgctgctccggcgtcatggccgcggc	Protospacer
  * * .***** **************.****

30. spacer 2.30|2106497|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to NZ_KU963390 (Escherichia coli strain ECO37 plasmid ECO37P2, complete sequence) position: , mismatch: 7, identity: 0.781

ttacaatcaccgcacaagaggtttagtccagg	CRISPR spacer
ttacaatcaccgcacatcaggttagcgctagg	Protospacer
****************  ***** .  *.***

31. spacer 2.30|2106497|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to NC_011148 (Salmonella enterica subsp. enterica serovar Agona str. SL483 plasmid, complete sequence) position: , mismatch: 7, identity: 0.781

ttacaatcaccgcacaagaggtttagtccagg	CRISPR spacer
ttacaatcaccgcacatcaggttagcgctagg	Protospacer
****************  ***** .  *.***

32. spacer 2.32|2106619|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP019309 (Phaeobacter inhibens strain DOK1-1 plasmid pDOK1-1-2, complete sequence) position: , mismatch: 7, identity: 0.781

gcgaactgcgcaccgacatttcggccagttcg--	CRISPR spacer
gtgaactacgccccgacatttcggc--gctggag	Protospacer
*.*****.*** *************  *.* *

33. spacer 1.1|2104501|31|NZ_CP011642|CRT matches to MK279898 (Mycobacterium phage Cici, complete genome) position: , mismatch: 8, identity: 0.742

ctgctgtgcgatatcaacagcgatcttatca	CRISPR spacer
gtgctgtgcgatgtcaacagcgaatctgttt	Protospacer
 ***********.********** ..*.*.

34. spacer 1.1|2104501|31|NZ_CP011642|CRT matches to NZ_CP045327 (Mycobacterium sp. THAF192 plasmid pTHAF192_b, complete sequence) position: , mismatch: 8, identity: 0.742

ctgctgtgcgatatcaacagcgatcttatca	CRISPR spacer
ccgtgcggcgatatcaacggcgatctgatcg	Protospacer
*.*.   ***********.******* ***.

35. spacer 1.3|2104623|31|NZ_CP011642|CRT matches to NC_022235 (Sphingomonas sp. ERG5 plasmid pCADAB1, complete sequence) position: , mismatch: 8, identity: 0.742

ctgcgccttctcagagaaagcccggatttcg	CRISPR spacer
cagcgccttctcagagatcgcccggccaatg	Protospacer
* ***************  ****** .  .*

36. spacer 2.1|2104726|32|NZ_CP011642|CRT matches to MH513976 (Mycobacterium phage Morty007, complete genome) position: , mismatch: 8, identity: 0.75

ttcgatggtgcgcgggttgtacagcgtgacac	CRISPR spacer
ctcgttggtgcgcgggttgaacaggtacaccc	Protospacer
.*** ************** ****    ** *

37. spacer 2.1|2104726|32|NZ_CP011642|CRT matches to MK061414 (Mycobacterium phage Marley1013, complete genome) position: , mismatch: 8, identity: 0.75

ttcgatggtgcgcgggttgtacagcgtgacac	CRISPR spacer
ctcgttggtgcgcgggttgaacaggtacaccc	Protospacer
.*** ************** ****    ** *

38. spacer 2.4|2104909|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to NC_047815 (Erwinia phage vB_EamM_Yoloswag, complete genome) position: , mismatch: 8, identity: 0.75

gcggtaaaggctgcttcgtcgtcttcttcctc	CRISPR spacer
tcctcatctgctgcttcttcgtcttcttcctc	Protospacer
 *  .*   ******** **************

39. spacer 2.13|2105458|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to KX912252 (Pseudoalteromonas phage PHS3, complete genome) position: , mismatch: 8, identity: 0.75

tactgggtatctatttagtttcattacgccac	CRISPR spacer
taccgtgtatctatttagtttcatcttaaaac	Protospacer
***.* ******************. ..  **

40. spacer 2.27|2106313|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to MG710528 (Escherichia phage GER2, complete genome) position: , mismatch: 8, identity: 0.75

atggccacgcatgactgctggcgcacaaccta-	CRISPR spacer
cgggccatgcatgacttctggcgca-gacagat	Protospacer
  *****.******** ******** .**  *

41. spacer 2.29|2106436|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP010898 (Pandoraea vervacti strain NS15 plasmid pPV15, complete sequence) position: , mismatch: 8, identity: 0.75

atctggcgctgcgccggcgtcatggccacggc	CRISPR spacer
aagcgacgctgcgcctgcgtcatgtccacgcg	Protospacer
*  .*.********* ******** *****

42. spacer 2.29|2106436|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP050105 (Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b6, complete sequence) position: , mismatch: 8, identity: 0.75

atctggcgctgcgccggcgtcatggccacggc	CRISPR spacer
gcctcgacatgcgccggcgtcatcgccagggc	Protospacer
..** *   ************** **** ***

43. spacer 2.29|2106436|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP025014 (Rhizobium leguminosarum strain Norway plasmid pRLN2, complete sequence) position: , mismatch: 8, identity: 0.75

atctggcgctgcgccggcgtcatggccacggc	CRISPR spacer
gcctcgacatgcgccggcgtcatcgccagggc	Protospacer
..** *   ************** **** ***

44. spacer 2.29|2106436|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP013525 (Rhizobium phaseoli strain R744 plasmid pRphaR744c, complete sequence) position: , mismatch: 8, identity: 0.75

atctggcgctgcgccggcgtcatggccacggc	CRISPR spacer
gcctcgacatgcgccggcgtcatcgccaaggc	Protospacer
..** *   ************** **** ***

45. spacer 2.29|2106436|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP013554 (Rhizobium phaseoli strain N931 plasmid pRphaN931b, complete sequence) position: , mismatch: 8, identity: 0.75

atctggcgctgcgccggcgtcatggccacggc	CRISPR spacer
gcctcgacatgcgccggcgtcatcgccaaggc	Protospacer
..** *   ************** **** ***

46. spacer 2.29|2106436|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP025508 (Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvB, complete sequence) position: , mismatch: 8, identity: 0.75

atctggcgctgcgccggcgtcatggccacggc	CRISPR spacer
gcctcgacatgcgccggcgtcatcgccagggc	Protospacer
..** *   ************** **** ***

47. spacer 2.29|2106436|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP013560 (Rhizobium phaseoli strain N841 plasmid pRphaN841c, complete sequence) position: , mismatch: 8, identity: 0.75

atctggcgctgcgccggcgtcatggccacggc	CRISPR spacer
gcctcgacatgcgccggcgtcatcgccaaggc	Protospacer
..** *   ************** **** ***

48. spacer 2.29|2106436|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP013565 (Rhizobium phaseoli strain N831 plasmid pRphaN831b, complete sequence) position: , mismatch: 8, identity: 0.75

atctggcgctgcgccggcgtcatggccacggc	CRISPR spacer
gcctcgacatgcgccggcgtcatcgccaaggc	Protospacer
..** *   ************** **** ***

49. spacer 2.29|2106436|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP050110 (Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b4, complete sequence) position: , mismatch: 8, identity: 0.75

atctggcgctgcgccggcgtcatggccacggc	CRISPR spacer
gcctcgacatgcgccggcgtcatcgccagggc	Protospacer
..** *   ************** **** ***

50. spacer 2.29|2106436|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP030764 (Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed4, complete sequence) position: , mismatch: 8, identity: 0.75

atctggcgctgcgccggcgtcatggccacggc	CRISPR spacer
gcctcgacatgcgccggcgtcatcgccagggc	Protospacer
..** *   ************** **** ***

51. spacer 2.29|2106436|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP022667 (Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR2, complete sequence) position: , mismatch: 8, identity: 0.75

atctggcgctgcgccggcgtcatggccacggc	CRISPR spacer
gcctcgacatgcgccggcgtcatcgccagggc	Protospacer
..** *   ************** **** ***

52. spacer 2.29|2106436|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to NC_010998 (Rhizobium etli CIAT 652 plasmid pA, complete sequence) position: , mismatch: 8, identity: 0.75

atctggcgctgcgccggcgtcatggccacggc	CRISPR spacer
gcctcgacatgcgccggcgtcatcgccaaggc	Protospacer
..** *   ************** **** ***

53. spacer 2.29|2106436|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP050087 (Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b5, complete sequence) position: , mismatch: 8, identity: 0.75

atctggcgctgcgccggcgtcatggccacggc	CRISPR spacer
gcctcgacatgcgccggcgtcatcgccagggc	Protospacer
..** *   ************** **** ***

54. spacer 2.29|2106436|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to MK838113 (Aeromonas phage LAh_7, complete genome) position: , mismatch: 8, identity: 0.75

atctggcgctgcgccggcgtcatggccacggc	CRISPR spacer
gccctgcgccgcgccggcgtcgtggccaagcc	Protospacer
..*. ****.***********.****** * *

55. spacer 2.30|2106497|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to MH920640 (Synechoccus phage S-E7, complete genome) position: , mismatch: 8, identity: 0.75

ttacaatcaccgcacaagaggtttagtccagg--	CRISPR spacer
ttacaatcaccgcagaagatgtt--gttgatatc	Protospacer
************** **** ***  **. * .

56. spacer 2.30|2106497|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to MH920639 (Synechoccus phage S-P4, partial genome) position: , mismatch: 8, identity: 0.75

ttacaatcaccgcacaagaggtttagtccagg--	CRISPR spacer
ttacaatcaccgcagaagatgtt--gttgatatc	Protospacer
************** **** ***  **. * .

57. spacer 2.32|2106619|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to NC_014035 (Rhodobacter capsulatus SB 1003 plasmid pRCB133, complete sequence) position: , mismatch: 8, identity: 0.75

-gcgaactgcgcaccgacatttcggccagttcg	CRISPR spacer
gatgcacc-cgcaccgacagttccgccagttct	Protospacer
 ..* **. ********** *** ********

58. spacer 1.1|2104501|31|NZ_CP011642|CRT matches to MF919498 (Mycobacterium phage Cindaradix, complete genome) position: , mismatch: 9, identity: 0.71

ctgctgtgcgatatcaacagcgatcttatca	CRISPR spacer
gcgctgtgcgatgtcaacaccgatcgcaaag	Protospacer
 .**********.****** ***** .*  .

59. spacer 1.4|2104501|32|NZ_CP011642|CRISPRCasFinder matches to NZ_CP045327 (Mycobacterium sp. THAF192 plasmid pTHAF192_b, complete sequence) position: , mismatch: 9, identity: 0.719

ctgctgtgcgatatcaacagcgatcttatcaa	CRISPR spacer
ccgtgcggcgatatcaacggcgatctgatcgt	Protospacer
*.*.   ***********.******* ***.

60. spacer 1.6|2104623|32|NZ_CP011642|CRISPRCasFinder matches to NC_022235 (Sphingomonas sp. ERG5 plasmid pCADAB1, complete sequence) position: , mismatch: 9, identity: 0.719

ctgcgccttctcagagaaagcccggatttcgt	CRISPR spacer
cagcgccttctcagagatcgcccggccaatgc	Protospacer
* ***************  ****** .  .*.

61. spacer 2.1|2104726|32|NZ_CP011642|CRT matches to NZ_CP031599 (Roseovarius indicus strain DSM 26383 plasmid pRIdsm_01, complete sequence) position: , mismatch: 9, identity: 0.719

ttcgatggtgcgcgggttgtacagcgtgacac	CRISPR spacer
cgcgatggtgcgcgggtcgaacagcccgtcca	Protospacer
. ***************.* ***** .* *

62. spacer 2.4|2104909|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to KY979132 (Acidovorax phage ACP17, complete genome) position: , mismatch: 9, identity: 0.719

gcggtaaaggctgcttcgtcgtcttcttcctc	CRISPR spacer
tccacttgggctgcttcgtggtcttcgtcctc	Protospacer
 * ..  .*********** ****** *****

63. spacer 2.4|2104909|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to NC_049850 (Burkholderia phage BcepSaruman, complete genome) position: , mismatch: 9, identity: 0.719

gcggtaaaggctgcttcgtcgtcttcttcctc	CRISPR spacer
ttcttcggggccggttcgtcgtcttcttcctc	Protospacer
 .  * ..***.* ******************

64. spacer 2.9|2105214|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP039900 (Agrobacterium tumefaciens strain CFBP5877 plasmid pAtCFBP5877b, complete sequence) position: , mismatch: 9, identity: 0.719

gcgcagcttcaggtaacggtctgcgccggtgc	CRISPR spacer
gggcggcttcaggtaacgatctgcgtgccttt	Protospacer
* **.*************.******.   * .

65. spacer 2.9|2105214|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP039891 (Agrobacterium tumefaciens strain CFBP5499 plasmid pAtCFBP5499b, complete sequence) position: , mismatch: 9, identity: 0.719

gcgcagcttcaggtaacggtctgcgccggtgc	CRISPR spacer
gggcggcttcaggtaacgatctgcgtgccttt	Protospacer
* **.*************.******.   * .

66. spacer 2.11|2105336|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP039900 (Agrobacterium tumefaciens strain CFBP5877 plasmid pAtCFBP5877b, complete sequence) position: , mismatch: 9, identity: 0.719

gcgcagcttcaggtaacggtctgcgccggtgc	CRISPR spacer
gggcggcttcaggtaacgatctgcgtgccttt	Protospacer
* **.*************.******.   * .

67. spacer 2.11|2105336|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP039891 (Agrobacterium tumefaciens strain CFBP5499 plasmid pAtCFBP5499b, complete sequence) position: , mismatch: 9, identity: 0.719

gcgcagcttcaggtaacggtctgcgccggtgc	CRISPR spacer
gggcggcttcaggtaacgatctgcgtgccttt	Protospacer
* **.*************.******.   * .

68. spacer 2.14|2105519|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to MN694729 (Marine virus AFVG_250M1111, complete genome) position: , mismatch: 9, identity: 0.719

ctaaaatggcatggacacaatcttgcccaata	CRISPR spacer
ccaaaatagcatggacacattcttgaattgaa	Protospacer
*.*****.*********** *****  . . *

69. spacer 2.14|2105519|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to MN694290 (Marine virus AFVG_250M636, complete genome) position: , mismatch: 9, identity: 0.719

ctaaaatggcatggacacaatcttgcccaata	CRISPR spacer
ccaaaatagcatggacacattcttgaattgaa	Protospacer
*.*****.*********** *****  . . *

70. spacer 2.18|2105763|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP046164 (Vibrio sp. THAF191c plasmid pTHAF191c_c, complete sequence) position: , mismatch: 9, identity: 0.719

gcgctcgatggggagacgttggtttttccgaa	CRISPR spacer
gatttggatggtgagacgttggtctttccttc	Protospacer
*  .* ***** ***********.*****

71. spacer 2.18|2105763|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP046067 (Vibrio sp. THAF191d plasmid pTHAF191d_c, complete sequence) position: , mismatch: 9, identity: 0.719

gcgctcgatggggagacgttggtttttccgaa	CRISPR spacer
gatttggatggtgagacgttggtctttccttc	Protospacer
*  .* ***** ***********.*****

72. spacer 2.18|2105763|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP031474 (Vibrio coralliilyticus strain RE22 plasmid p337, complete sequence) position: , mismatch: 9, identity: 0.719

gcgctcgatggggagacgttggtttttccgaa	CRISPR spacer
gatttggatggtgagacgttggtctttccttc	Protospacer
*  .* ***** ***********.*****

73. spacer 2.18|2105763|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP009266 (Vibrio coralliilyticus strain OCN014 plasmid pOCN014, complete sequence) position: , mismatch: 9, identity: 0.719

gcgctcgatggggagacgttggtttttccgaa	CRISPR spacer
gatttggatggtgagacgttggtctttccttc	Protospacer
*  .* ***** ***********.*****

74. spacer 2.18|2105763|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP009620 (Vibrio coralliilyticus strain RE98 plasmid p319, complete sequence) position: , mismatch: 9, identity: 0.719

gcgctcgatggggagacgttggtttttccgaa	CRISPR spacer
gatttggatggtgagacgttggtctttccttc	Protospacer
*  .* ***** ***********.*****

75. spacer 2.18|2105763|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP045357 (Vibrio sp. THAF64 plasmid pTHAF64_b, complete sequence) position: , mismatch: 9, identity: 0.719

gcgctcgatggggagacgttggtttttccgaa	CRISPR spacer
gatttggatggtgagacgttggtctttccttc	Protospacer
*  .* ***** ***********.*****

76. spacer 2.20|2105885|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP032687 (Rhizobium sp. CCGE531 plasmid pRCCGE531b, complete sequence) position: , mismatch: 9, identity: 0.719

cgtttcagcagatccacattgccgtaaagctg-----	CRISPR spacer
ggtttcagcagaaccgcattgcc-----gccggcaat	Protospacer
 *********** **.*******     **.*

77. spacer 2.20|2105885|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP028348 (Novosphingobium sp. THN1 plasmid pTHN, complete sequence) position: , mismatch: 9, identity: 0.719

cgtttcagcagatccacattgccgtaaagctg	CRISPR spacer
tctttccgcagatccacagtgccgtgtcgccc	Protospacer
. **** *********** ******.  **.

78. spacer 2.20|2105885|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to NC_021909 (Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1e, complete sequence) position: , mismatch: 9, identity: 0.719

cgtttcagcagatccacattgccgtaaagctg-----	CRISPR spacer
ggtttcagcagaaccgcattgcc-----gccggcaat	Protospacer
 *********** **.*******     **.*

79. spacer 2.20|2105885|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to NC_020061 (Rhizobium tropici CIAT 899 plasmid pRtrCIAT899b, complete sequence) position: , mismatch: 9, identity: 0.719

cgtttcagcagatccacattgccgtaaagctg-----	CRISPR spacer
ggtttcagcagaaccgcattgcc-----gccggcaat	Protospacer
 *********** **.*******     **.*

80. spacer 2.24|2106130|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP050093 (Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b5, complete sequence) position: , mismatch: 9, identity: 0.719

tgtacccatcccagtcgccgccatattcgtac	CRISPR spacer
ccctgccctcccagccgccgccatattcgtcg	Protospacer
. .  ** ******.***************

81. spacer 2.24|2106130|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to NC_008384 (Rhizobium leguminosarum bv. viciae 3841 plasmid pRL11, complete sequence) position: , mismatch: 9, identity: 0.719

tgtacccatcccagtcgccgccatattcgtac	CRISPR spacer
ccctgccctcccagccgccgccatattcgtcg	Protospacer
. .  ** ******.***************

82. spacer 2.24|2106130|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP016287 (Rhizobium leguminosarum strain Vaf10 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

tgtacccatcccagtcgccgccatattcgtac	CRISPR spacer
ccctgccctcccagccgccgccatattcgtcg	Protospacer
. .  ** ******.***************

83. spacer 2.24|2106130|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP048282 (Rhizobium leguminosarum bv. viciae 248 plasmid pRle248d, complete sequence) position: , mismatch: 9, identity: 0.719

tgtacccatcccagtcgccgccatattcgtac	CRISPR spacer
ccctgccctcccagccgccgccatattcatcc	Protospacer
. .  ** ******.*************.* *

84. spacer 2.29|2106436|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP013454 (Burkholderia vietnamiensis strain MSMB608WGS plasmid pMSMB608, complete sequence) position: , mismatch: 9, identity: 0.719

atctggcgctgcgccggcgtcatggccacggc	CRISPR spacer
tgacggcgctgcgccggcgccatcgccgagcc	Protospacer
   .***************.*** ***. * *

85. spacer 2.29|2106436|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP007795 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p2, complete sequence) position: , mismatch: 9, identity: 0.719

atctggcgctgcgccggcgtcatgg----ccacggc	CRISPR spacer
cgctggcgccgcgccggcgccatggtggaccg----	Protospacer
  *******.*********.*****    **.

86. spacer 2.29|2106436|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP011518 (Pandoraea oxalativorans strain DSM 23570 plasmid pPO70-1, complete sequence) position: , mismatch: 9, identity: 0.719

atctggcgctgcgccggcgtcatggccacggc	CRISPR spacer
aagcgacgctgcgcctgcgtcatgtccacccg	Protospacer
*  .*.********* ******** ****

87. spacer 2.29|2106436|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP016453 (Sphingobium sp. RAC03 plasmid pBSY17_1, complete sequence) position: , mismatch: 9, identity: 0.719

atctggcgctgcgccggcgtcatggccacggc	CRISPR spacer
gtgccgatatgcggcggcgtcatggccaccgc	Protospacer
.* . *   **** *************** **

88. spacer 2.30|2106497|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to HQ634189 (Cyanophage Syn30 genomic sequence) position: , mismatch: 9, identity: 0.719

ttacaatcaccgcacaagaggtttagtccagg	CRISPR spacer
ttacaatcaccgcagaagatgttgttgacatc	Protospacer
************** **** ***     **

89. spacer 2.31|2106558|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP018096 (Chelatococcus daeguensis strain TAD1 plasmid pTAD1, complete sequence) position: , mismatch: 9, identity: 0.719

tcactggcactgacgtcatggccgccttgggg	CRISPR spacer
gttcgacgaccgacgtcatggccgcctcgggg	Protospacer
 . * .  **.****************.****

90. spacer 1.1|2104501|31|NZ_CP011642|CRT matches to NZ_CP046903 (Pseudomonas stutzeri strain PM101005 plasmid p1_PM101005, complete sequence) position: , mismatch: 10, identity: 0.677

ctgctgtgcgatatcaacagcgatcttatca	CRISPR spacer
ggcctgggcgatatcaacagcgagctggcgg	Protospacer
   *** **************** ** .. .

91. spacer 1.4|2104501|32|NZ_CP011642|CRISPRCasFinder matches to MF919498 (Mycobacterium phage Cindaradix, complete genome) position: , mismatch: 10, identity: 0.688

ctgctgtgcgatatcaacagcgatcttatcaa	CRISPR spacer
gcgctgtgcgatgtcaacaccgatcgcaaagt	Protospacer
 .**********.****** ***** .*  .

92. spacer 2.13|2105458|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to NC_008573 (Shewanella sp. ANA-3 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

tactgggtatctatttagtttcattacgccac	CRISPR spacer
agccatcaatttatttactttcattacgccaa	Protospacer
 .*..   **.****** *************

93. spacer 2.13|2105458|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to KF929199 (Staphylococcus phage vB_SepS_SEP9, complete genome) position: , mismatch: 10, identity: 0.688

tactgggtatctatttagtttcattacgccac	CRISPR spacer
tttagggtctctaattagtttcattactttta	Protospacer
* . **** **** ************* ..

94. spacer 2.14|2105519|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to MN694499 (Marine virus AFVG_250M606, complete genome) position: , mismatch: 10, identity: 0.688

ctaaaatggcatggacacaatcttgcccaata	CRISPR spacer
ccaaaatagcatggacacattcttgtattgag	Protospacer
*.*****.*********** *****. . . .

95. spacer 2.14|2105519|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to MG732930 (Enterobacter phage Ec_L1, complete genome) position: , mismatch: 10, identity: 0.688

ctaaaatggcatggacacaatcttgcccaata	CRISPR spacer
aaagaatggcattgaaacaatcttgccaccag	Protospacer
  *.******** ** ***********    .

96. spacer 2.31|2106558|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to MF417939 (Uncultured Caudovirales phage clone 7S_2, partial genome) position: , mismatch: 10, identity: 0.688

tcactggcactgacgtcatggccgccttgggg	CRISPR spacer
ctcgaaagactgacgtcctggccgccgtgggg	Protospacer
..   .. ********* ******** *****

97. spacer 1.4|2104501|32|NZ_CP011642|CRISPRCasFinder matches to NZ_CP046903 (Pseudomonas stutzeri strain PM101005 plasmid p1_PM101005, complete sequence) position: , mismatch: 11, identity: 0.656

ctgctgtgcgatatcaacagcgatcttatcaa	CRISPR spacer
ggcctgggcgatatcaacagcgagctggcggc	Protospacer
   *** **************** ** .. .

98. spacer 2.32|2106619|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP049159 (Caballeronia sp. SBC1 plasmid pSBC1_3, complete sequence) position: , mismatch: 11, identity: 0.656

gcgaactgcgcaccgacatttcggccagttcg	CRISPR spacer
aaatggtgcgcaccgacatgccggccagtctc	Protospacer
. . . ************* .********..

99. spacer 2.32|2106619|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP049320 (Caballeronia sp. SBC2 plasmid pSBC2-4, complete sequence) position: , mismatch: 11, identity: 0.656

gcgaactgcgcaccgacatttcggccagttcg	CRISPR spacer
aaatggtgcgcaccgacatgccggccagtctc	Protospacer
. . . ************* .********..

100. spacer 2.29|2106436|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP032323 (Azospirillum brasilense strain MTCC4035 plasmid p2, complete sequence) position: , mismatch: 16, identity: 0.5

--atctggcgctgcgccggcgtcatggccacggc	CRISPR spacer
cggtccaccatggcgccggcgcggcgccagcg--	Protospacer
  .**.. *.. *********. ..* * .**

101. spacer 2.29|2106436|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP032347 (Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence) position: , mismatch: 16, identity: 0.5

--atctggcgctgcgccggcgtcatggccacggc	CRISPR spacer
cggtccaccatggcgccggcgcggcgccagcg--	Protospacer
  .**.. *.. *********. ..* * .**

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

198839 : 264293

Tupanvirus(20.0%)

coat,protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_047727674.1\|198839_201227_-\|tRNA	phenylalanine--tRNA ligase subunit beta	A0A1L3IZU3	BeAn_58058_virus	3.1e-05	24.0
WP_004931416.1\|201241_202225_-\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2K9L3A8	Tupanvirus	2.2e-34	38.9
WP_121626058.1\|202486_202531_-	pheST operon leader peptide PheM	NA	NA	NA	NA
WP_004931417.1\|202648_203005_-	50S ribosomal protein L20	NA	NA	NA	NA
WP_004931418.1\|203048_203246_-	50S ribosomal protein L35	NA	NA	NA	NA
WP_048233542.1\|203344_203896_-	translation initiation factor IF-3	A0A2L0UZ54	Agrobacterium_phage	2.6e-16	33.7
WP_025159696.1\|203899_205828_-\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	3.5e-132	37.7
WP_038877589.1\|208501_209125_-	hypothetical protein	NA	NA	NA	NA
WP_047727675.1\|209380_209569_+	hypothetical protein	NA	NA	NA	NA
WP_038877591.1\|209671_210358_+	MarC family NAAT transporter	NA	NA	NA	NA
WP_047727676.1\|210395_211529_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_047727677.1\|211680_212964_-	serine/threonine protein kinase	NA	NA	NA	NA
WP_047727678.1\|213221_214559_-	cytochrome c	NA	NA	NA	NA
WP_025302609.1\|214571_216353_-	GMC family oxidoreductase	NA	NA	NA	NA
WP_038877597.1\|216355_217081_-	gluconate 2-dehydrogenase subunit 3 family protein	NA	NA	NA	NA
WP_025159924.1\|217388_218054_-	transglycosylase SLT domain-containing protein	I6ZXX9	Escherichia_phage	2.9e-06	44.4
WP_038877599.1\|218163_218463_+	type V toxin-antitoxin system endoribonuclease antitoxin GhoS	NA	NA	NA	NA
WP_154235551.1\|218648_219539_+	metal ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_047727680.1\|219535_220426_+	manganese/iron ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	5.3e-11	27.1
WP_038877606.1\|220425_221286_+	iron/manganese ABC transporter permease subunit YfeC	NA	NA	NA	NA
WP_038877608.1\|221285_222140_+	metal ABC transporter permease	NA	NA	NA	NA
WP_004931452.1\|222377_223247_+	fructosamine kinase family protein	NA	NA	NA	NA
WP_038877612.1\|223282_223843_-	membrane protein	NA	NA	NA	NA
WP_047727681.1\|224028_225309_+\|protease	protease	NA	NA	NA	NA
WP_047727682.1\|225373_226039_+	hexitol phosphatase HxpB	NA	NA	NA	NA
WP_047727683.1\|226463_227012_+	metal-dependent hydrolase	A0A127AVX7	Bacillus_phage	1.1e-06	35.8
WP_110612175.1\|227187_228585_+	L-cystine transporter	NA	NA	NA	NA
WP_038877622.1\|228649_229459_-	phosphonoacetaldehyde hydrolase	NA	NA	NA	NA
WP_047727685.1\|229468_230572_-	2-aminoethylphosphonate--pyruvate transaminase	NA	NA	NA	NA
WP_038877627.1\|230727_231447_+	phosphonate utilization transcriptional regulator PhnR	NA	NA	NA	NA
WP_047727686.1\|231621_232632_+	2-aminoethylphosphonate ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_154235507.1\|232628_233765_+	2-aminoethylphosphonate ABC transport system ATP-binding subunit PhnT	G3M9Y6	Bacillus_virus	5.7e-26	33.7
WP_047727687.1\|233766_234630_+	2-aminoethylphosphonate ABC transporter permease subunit	NA	NA	NA	NA
WP_047727688.1\|234632_235436_+	ABC transporter permease subunit	NA	NA	NA	NA
WP_038877637.1\|235482_236274_-	DNA-binding transcriptional regulator KdgR	NA	NA	NA	NA
WP_047727689.1\|236504_237899_+	MFS transporter	NA	NA	NA	NA
WP_154235508.1\|237979_239149_-	hypothetical protein	NA	NA	NA	NA
WP_047727691.1\|239151_240351_-	hypothetical protein	NA	NA	NA	NA
WP_033638291.1\|241224_242103_-\|protease	protease HtpX	NA	NA	NA	NA
WP_102779890.1\|242180_242381_-	hypothetical protein	NA	NA	NA	NA
WP_047727692.1\|242472_243564_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_038877645.1\|243566_244607_+	iron ABC transporter permease	NA	NA	NA	NA
WP_047727693.1\|244603_245389_+	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	8.8e-10	27.9
WP_047727694.1\|245376_246174_+	nicotianamine synthase	NA	NA	NA	NA
WP_047727695.1\|246166_247474_+	DUF2338 family protein	NA	NA	NA	NA
WP_038877656.1\|247470_248316_+	DMT family transporter	NA	NA	NA	NA
WP_038877658.1\|248383_250432_-	carboxy terminal-processing peptidase	A0A0R6PIZ1	Moraxella_phage	2.6e-85	33.9
WP_033638287.1\|250451_251162_-	RNA chaperone ProQ	NA	NA	NA	NA
WP_038877659.1\|251258_251756_-	GAF domain-containing protein	NA	NA	NA	NA
WP_047730736.1\|252011_253259_+	membrane integrity lipid transport subunit YebS	NA	NA	NA	NA
WP_038877827.1\|253227_255858_+	PqiB family protein	NA	NA	NA	NA
WP_047727696.1\|255960_257397_+	16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF	NA	NA	NA	NA
WP_038877665.1\|257669_258206_+\|coat	spore coat U domain-containing protein	NA	NA	NA	NA
WP_038877667.1\|258479_259016_+	fimbrial major subunit CsuA/B family protein	NA	NA	NA	NA
WP_038877669.1\|259018_259522_+\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_038882152.1\|259515_260058_+\|coat	spore coat U domain-containing protein	NA	NA	NA	NA
WP_038877673.1\|260079_260847_+	molecular chaperone	NA	NA	NA	NA
WP_038877828.1\|260998_263341_+	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
WP_047727697.1\|263360_264293_+\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA

DBSCAN-SWA_2

1276091 : 1281793

Clostridium_botulinum_C_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_038877428.1\|1276091_1277159_+	diguanylate cyclase	A0A127AWB9	Bacillus_phage	1.1e-15	32.7
WP_047728549.1\|1277160_1277589_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_004940022.1\|1277813_1278197_+	fluoride efflux transporter CrcB	A0A2H4J148	uncultured_Caudovirales_phage	5.2e-24	54.2
WP_038877424.1\|1278486_1279083_+	TetR family transcriptional regulator	NA	NA	NA	NA
WP_047728551.1\|1279089_1280280_+	multidrug effflux MFS transporter	S4TR35	Salmonella_phage	1.9e-27	29.2
WP_038874510.1\|1280353_1280791_-\|transposase	IS200/IS605 family transposase	Q331U4	Clostridium_botulinum_C_phage	1.8e-20	39.2
WP_038874510.1\|1280976_1281414_-\|transposase	IS200/IS605 family transposase	Q331U4	Clostridium_botulinum_C_phage	1.8e-20	39.2
WP_004940030.1\|1281583_1281793_-	transcription antiterminator/RNA stability regulator CspE	A0A1W6JNX5	Morganella_phage	1.7e-21	78.1

DBSCAN-SWA_3

3060237 : 3124375

uncultured_Caudovirales_phage(20.0%)

integrase,transposase,tail,tRNA

attL 3109061:3109097|attR 3126616:3126652

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_038874320.1\|3060237_3061248_+\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA
WP_047729738.1\|3061405_3061624_+	envelope stress response protein PspG	NA	NA	NA	NA
WP_038874319.1\|3061924_3062908_-	quinone oxidoreductase	NA	NA	NA	NA
WP_025160134.1\|3063075_3064500_+	replicative DNA helicase	A0A1B0VG30	Salmonella_phage	6.2e-195	77.0
WP_047729739.1\|3064517_3065597_+	alanine racemase	A0A0P0YM39	Yellowstone_lake_mimivirus	2.2e-27	27.9
WP_047729740.1\|3065641_3066409_-	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_038874314.1\|3066624_3067098_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
WP_047729741.1\|3067175_3068369_+	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA
WP_004936779.1\|3068495_3068912_+	hypothetical protein	NA	NA	NA	NA
WP_038874311.1\|3068916_3069270_+	MmcQ/YjbR family DNA-binding protein	NA	NA	NA	NA
WP_038874310.1\|3069421_3069979_+	maltose O-acetyltransferase	NA	NA	NA	NA
WP_047729742.1\|3070009_3071062_-	NAD(P)-dependent alcohol dehydrogenase	A0A2K9L339	Tupanvirus	1.4e-79	43.8
WP_038874306.1\|3071291_3074120_-	excinuclease ABC subunit UvrA	A0A1B1IVR3	uncultured_Mediterranean_phage	7.4e-309	55.2
WP_004936793.1\|3074397_3074928_+	single-stranded DNA-binding protein SSB1	A0A0A0P1Q9	Enterobacteria_phage	1.1e-56	85.8
WP_038874510.1\|3075013_3075451_-\|transposase	IS200/IS605 family transposase	Q331U4	Clostridium_botulinum_C_phage	1.8e-20	39.2
WP_047729743.1\|3075614_3076364_-	3-oxoacyl-ACP reductase FabG	NA	NA	NA	NA
WP_038874302.1\|3076511_3076772_-	DUF1471 domain-containing protein	NA	NA	NA	NA
WP_047729744.1\|3076968_3077412_+	lipocalin-like domain-containing protein	NA	NA	NA	NA
WP_038874300.1\|3077408_3078077_+	glutathione S-transferase	NA	NA	NA	NA
WP_038874298.1\|3078124_3078532_+	VOC family protein	NA	NA	NA	NA
WP_004936819.1\|3078864_3080226_+	NCS2 family permease	A0A0R6PHV4	Moraxella_phage	2.7e-163	74.5
WP_025304430.1\|3080423_3082073_+	Na+/H+ antiporter	NA	NA	NA	NA
WP_038874296.1\|3082147_3083035_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_028127545.1\|3083174_3083597_+	murein hydrolase regulator LrgA	NA	NA	NA	NA
WP_047729745.1\|3083589_3084279_+	LrgB family protein	NA	NA	NA	NA
WP_047729746.1\|3084890_3102743_+	non-ribosomal peptide synthetase	A0A2K9KZV5	Tupanvirus	7.1e-163	26.5
WP_071845341.1\|3102796_3104002_-\|transposase	ISL3 family transposase	NA	NA	NA	NA
WP_047730831.1\|3104110_3104806_-	CTP synthase	A0A0R6PHX8	Moraxella_phage	7.5e-21	27.1
WP_071845343.1\|3104895_3106101_-\|transposase	ISL3 family transposase	NA	NA	NA	NA
WP_047729749.1\|3106242_3107163_-	kdo(2)-lipid IV(A) palmitoleoyltransferase	A0A1W6JP29	Morganella_phage	2.4e-75	52.3
WP_038879755.1\|3107460_3108366_-	lipid A hydroxylase LpxO	S4VR59	Pandoravirus	8.8e-38	38.4
WP_016930249.1\|3108613_3108955_+	hypothetical protein	NA	NA	NA	NA
3109061:3109097	attL	NA	NA	NA	NA
WP_047729750.1\|3109270_3110497_+\|integrase	site-specific integrase	A0A2H4JB45	uncultured_Caudovirales_phage	2.3e-150	61.7
WP_154235525.1\|3110588_3111377_+	hypothetical protein	NA	NA	NA	NA
WP_071845345.1\|3111491_3111776_+	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_047729753.1\|3111919_3112696_+	anti-repressor protein	A0A0R6PHG7	Moraxella_phage	5.6e-25	54.5
WP_071845347.1\|3112937_3113117_-	hypothetical protein	A0A2H4JB52	uncultured_Caudovirales_phage	3.4e-10	55.2
WP_154235526.1\|3113247_3113520_+	host cell division inhibitor Icd-like protein	A0A2H4JGW3	uncultured_Caudovirales_phage	5.5e-36	79.5
WP_047729754.1\|3113509_3113710_+	hypothetical protein	NA	NA	NA	NA
WP_047729755.1\|3113702_3113939_+	hypothetical protein	NA	NA	NA	NA
WP_047729756.1\|3113931_3114120_+	hypothetical protein	NA	NA	NA	NA
WP_047729757.1\|3114112_3114367_+	hypothetical protein	NA	NA	NA	NA
WP_047729758.1\|3114363_3114702_+	hypothetical protein	A0A2H4JCX7	uncultured_Caudovirales_phage	4.9e-26	58.0
WP_080346936.1\|3114962_3116429_+	DNA primase	Q7M2A8	Enterobacteria_phage	4.1e-125	49.7
WP_047729760.1\|3117013_3118156_+	Fic family protein	A0A1V0E025	Clostridioides_phage	1.4e-08	28.9
WP_080346897.1\|3118365_3119154_+	serine dehydrogenasease	NA	NA	NA	NA
WP_023279823.1\|3119199_3120123_-\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	9.6e-173	97.4
WP_154235527.1\|3120369_3120543_+	hypothetical protein	NA	NA	NA	NA
WP_047730834.1\|3120657_3121113_-	hypothetical protein	NA	NA	NA	NA
WP_154235528.1\|3121225_3121567_+	hypothetical protein	NA	NA	NA	NA
WP_047730835.1\|3121659_3122346_+	hypothetical protein	NA	NA	NA	NA
WP_047729762.1\|3122367_3122862_+	hypothetical protein	NA	NA	NA	NA
WP_154235529.1\|3122854_3123280_+	hypothetical protein	NA	NA	NA	NA
WP_154235530.1\|3123338_3123842_+	hypothetical protein	NA	NA	NA	NA
WP_047729763.1\|3123844_3124375_+\|tail	tail fiber assembly protein	A0A0F7LBP0	Escherichia_phage	9.7e-37	45.3
3126616:3126652	attR	NA	NA	NA	NA

DBSCAN-SWA_4

3550028 : 3560577

Pseudomonas_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_047729939.1\|3550028_3552581_+	hypothetical protein	W6MWW8	Pseudomonas_phage	6.2e-206	44.9
WP_146220580.1\|3552594_3553056_+	hypothetical protein	NA	NA	NA	NA
WP_154235532.1\|3553327_3553552_-	hypothetical protein	NA	NA	NA	NA
WP_154235533.1\|3553561_3554002_-	hypothetical protein	NA	NA	NA	NA
WP_047729942.1\|3554058_3554922_-	hypothetical protein	M9NYX6	Enterobacteria_phage	8.0e-105	65.3
WP_047729943.1\|3555561_3555801_-	AlpA family phage regulatory protein	A0A193GYW1	Enterobacter_phage	1.2e-13	50.0
WP_047729944.1\|3556514_3557477_+	abortive phage infection protein	A3QSC6	Clostridium_virus	1.3e-23	31.6
WP_047729945.1\|3557504_3557936_-	hypothetical protein	A0A1W6JPI4	Morganella_phage	5.5e-46	67.4
WP_047729946.1\|3558579_3560577_-	BCCT family transporter	A0A2I7QNT1	Vibrio_phage	2.0e-21	25.4

DBSCAN-SWA_5

3757834 : 3786219

Cronobacter_phage(76.67%)

capsid,terminase,integrase,head,tail,holin,portal

attL 3757713:3757760|attR 3789420:3789467

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3757713:3757760	attL	NA	NA	NA	NA
WP_047730021.1\|3757834_3758902_-\|integrase	site-specific integrase	A0A1S6L016	Salmonella_phage	2.1e-163	79.9
WP_047730022.1\|3758905_3759469_-	phage repressor protein CI	A0A218M4J1	Erwinia_phage	1.5e-32	42.3
WP_047730856.1\|3759625_3759886_+	hypothetical protein	F1BUS7	Erwinia_phage	5.9e-11	46.0
WP_047730023.1\|3759918_3760428_+	hypothetical protein	F1BUN6	Cronobacter_phage	2.2e-38	51.3
WP_047730024.1\|3760437_3760641_+	DUF2724 domain-containing protein	NA	NA	NA	NA
WP_047730025.1\|3760643_3761063_+	hypothetical protein	F1BUN5	Cronobacter_phage	1.3e-31	54.9
WP_047730027.1\|3761593_3761833_+	DUF2732 family protein	A0A0F7LBR4	Escherichia_phage	5.6e-08	61.1
WP_053056881.1\|3761936_3763985_+	replication endonuclease	F1BUM9	Cronobacter_phage	2.7e-260	66.8
WP_060437276.1\|3764263_3764590_-	ogr/Delta-like zinc finger family protein	F1BUM8	Cronobacter_phage	4.4e-40	77.5
WP_047730029.1\|3764586_3765639_-\|portal	phage portal protein	F1BUM7	Cronobacter_phage	3.0e-154	76.9
WP_047730030.1\|3765635_3767408_-\|terminase	terminase	F1BUM5	Cronobacter_phage	1.5e-286	81.1
WP_047730031.1\|3767567_3768365_+\|capsid	phage capsid scaffolding protein	F1BUM4	Cronobacter_phage	1.4e-71	53.5
WP_047730032.1\|3768420_3769443_+\|capsid	phage major capsid protein, P2 family	F1BUM2	Cronobacter_phage	2.5e-153	79.1
WP_047730033.1\|3769446_3770148_+\|terminase	terminase	F1BUM0	Cronobacter_phage	1.3e-84	66.8
WP_047730034.1\|3770244_3770697_+\|head	head completion/stabilization protein	F1BUL8	Cronobacter_phage	9.7e-62	79.3
WP_047730035.1\|3770693_3771197_+\|tail	phage tail protein	F1BUL7	Cronobacter_phage	2.3e-35	45.5
WP_047730036.1\|3771193_3771904_+	hypothetical protein	F1BUL6	Cronobacter_phage	1.6e-82	66.5
WP_047730037.1\|3771900_3773025_+	DUF2586 domain-containing protein	F1BUL5	Cronobacter_phage	1.0e-139	66.0
WP_047730038.1\|3773021_3773477_+	DUF2597 family protein	F1BUL4	Cronobacter_phage	9.2e-52	64.2
WP_047730039.1\|3773486_3773789_+\|holin	holin	C7BGD7	Burkholderia_phage	7.5e-18	52.1
WP_047730040.1\|3773775_3774117_+	M15 family metallopeptidase	F1BUL3	Cronobacter_phage	2.1e-40	77.2
WP_047730041.1\|3774116_3774461_+	hypothetical protein	F1BUL2	Cronobacter_phage	1.2e-24	56.8
WP_047730043.1\|3774608_3774878_+	hypothetical protein	A5X9I7	Aeromonas_virus	5.5e-20	58.5
WP_047730045.1\|3777596_3777944_+	DUF2590 family protein	F1BUK8	Cronobacter_phage	5.2e-31	67.7
WP_047730046.1\|3777921_3779106_+	phage protein	F1BUK6	Cronobacter_phage	2.4e-152	67.3
WP_047730047.1\|3779098_3779704_+	protein phage	F1BUK5	Cronobacter_phage	2.4e-71	69.3
WP_080346904.1\|3779709_3782889_+	hypothetical protein	F1BUK3	Cronobacter_phage	4.1e-106	65.9
WP_047730048.1\|3782891_3783320_+\|tail	tail fiber assembly protein	B6SCW7	Bacteriophage	1.3e-23	46.3
WP_047730049.1\|3783309_3784032_+	hypothetical protein	F1BUK1	Cronobacter_phage	2.9e-39	39.8
WP_047730050.1\|3784006_3784567_+	hypothetical protein	F1BUJ9	Cronobacter_phage	1.3e-50	58.8
WP_047730051.1\|3784563_3786219_+	hypothetical protein	F1BUJ7	Cronobacter_phage	4.7e-170	54.1
3789420:3789467	attR	NA	NA	NA	NA

DBSCAN-SWA_6

4250521 : 4311454

Enterobacteria_phage(29.63%)

integrase,transposase,tail,holin

attL 4285582:4285604|attR 4311657:4311679

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023279823.1\|4250521_4251445_+\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	9.6e-173	97.4
WP_038876356.1\|4251711_4252842_+	porin OmpC	Q1MVN1	Enterobacteria_phage	5.7e-103	53.3
WP_047730203.1\|4252991_4253408_+	glyoxalase	NA	NA	NA	NA
WP_038876352.1\|4253401_4253980_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_025303631.1\|4254087_4254555_+	nuclear transport factor 2 family protein	NA	NA	NA	NA
WP_025303630.1\|4254682_4255012_+	osmotically-inducible lipoprotein OsmE	NA	NA	NA	NA
WP_047730204.1\|4255438_4256116_-	hypothetical protein	K7PK07	Enterobacteria_phage	6.0e-07	45.7
WP_047730873.1\|4256325_4256688_+	antitermination protein	A0A0P0ZCW0	Stx2-converting_phage	1.6e-38	64.6
WP_019453678.1\|4257702_4258023_+\|holin	holin	F1C5D1	Cronobacter_phage	2.5e-40	81.0
WP_047730205.1\|4258009_4258450_+	lysozyme	A0A0M5M782	Salmonella_phage	8.9e-44	62.3
WP_047730206.1\|4258507_4258897_+	hypothetical protein	Q7Y405	Yersinia_phage	1.1e-24	42.1
WP_047730207.1\|4258893_4259286_+	HK97 gp10 family phage protein	Q7Y404	Yersinia_phage	2.7e-20	46.8
WP_016926946.1\|4259326_4259782_+\|tail	major tail shaft subunit	Q6UAX0	Klebsiella_phage	1.2e-56	74.8
WP_025160180.1\|4259905_4260271_+\|tail	phage tail protein	Q7Y401	Yersinia_phage	6.5e-24	45.0
WP_080280890.1\|4260288_4260510_+	hypothetical protein	Q6UAW9	Klebsiella_phage	1.0e-11	47.9
WP_047730208.1\|4260502_4262833_+\|tail	phage tail length tape measure protein	Q6UAW7	Klebsiella_phage	2.9e-16	43.1
WP_004935824.1\|4262832_4263171_+\|tail	phage tail protein	Q6UAW6	Klebsiella_phage	1.1e-33	60.0
WP_047730874.1\|4263184_4263934_+\|tail	phage minor tail protein L	K7PGX3	Enterobacteria_phage	4.5e-96	64.9
WP_047730209.1\|4263943_4264648_+	peptidase P60	K7PGR2	Enterobacteria_phage	1.5e-106	74.5
WP_019453668.1\|4264685_4265036_+	hypothetical protein	NA	NA	NA	NA
WP_047730210.1\|4265078_4265705_+\|tail	tail assembly protein	F1C572	Cronobacter_phage	2.6e-49	51.5
WP_047730211.1\|4265758_4268926_+	host specificity protein J	F1C571	Cronobacter_phage	0.0e+00	66.3
WP_071845376.1\|4269262_4269910_+	hypothetical protein	G8C7R6	Escherichia_phage	1.1e-39	37.1
WP_047730212.1\|4270003_4271290_+\|tail	tail fiber domain-containing protein	S4TSP4	Salmonella_phage	1.1e-46	47.3
WP_071845377.1\|4271293_4272568_+	hypothetical protein	Q7Y3Z0	Yersinia_phage	1.0e-23	51.3
WP_023279823.1\|4272613_4273537_-\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	9.6e-173	97.4
WP_047730213.1\|4274195_4274438_-	DinI family protein	K7PKR6	Enterobacteria_phage	2.6e-29	82.3
WP_038876342.1\|4275306_4275960_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_038876340.1\|4275960_4276449_+	hypothetical protein	NA	NA	NA	NA
WP_047730214.1\|4276441_4277173_-	hypothetical protein	NA	NA	NA	NA
WP_038876336.1\|4277190_4277853_-	VUT family protein	NA	NA	NA	NA
WP_047730215.1\|4278192_4278792_-	response regulator transcription factor	NA	NA	NA	NA
WP_080346908.1\|4278763_4280518_-	sensor histidine kinase	NA	NA	NA	NA
WP_047730216.1\|4280714_4281452_+	tetrathionate reductase subunit TtrB	NA	NA	NA	NA
WP_047730217.1\|4281448_4282474_+	tetrathionate reductase subunit TtrC	NA	NA	NA	NA
WP_047730218.1\|4282466_4285538_+	tetrathionate reductase subunit TtrA	A0A077SK27	Escherichia_phage	3.8e-08	27.1
4285582:4285604	attL	NA	NA	NA	NA
WP_071845378.1\|4286418_4287327_+	DUF4760 domain-containing protein	A0A1B5FPC5	Escherichia_phage	3.6e-23	31.2
WP_047730878.1\|4287533_4288385_+	hypothetical protein	NA	NA	NA	NA
WP_047730220.1\|4288485_4288692_+	AlpA family transcriptional regulator	NA	NA	NA	NA
WP_071845379.1\|4289024_4290230_+\|integrase	site-specific integrase	NA	NA	NA	NA
WP_047730221.1\|4290231_4291524_+\|integrase	site-specific integrase	NA	NA	NA	NA
WP_023279823.1\|4291569_4292493_-\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	9.6e-173	97.4
WP_047730222.1\|4292607_4294239_+	DNA-binding protein	NA	NA	NA	NA
WP_047730223.1\|4294239_4294644_+	hypothetical protein	NA	NA	NA	NA
WP_047730224.1\|4294740_4295154_+	hypothetical protein	NA	NA	NA	NA
WP_071845380.1\|4295549_4296920_+	hypothetical protein	NA	NA	NA	NA
WP_154235557.1\|4296995_4297298_-	outer membrane protein assembly factor BamE	NA	NA	NA	NA
WP_047730225.1\|4297400_4298069_-	hypothetical protein	NA	NA	NA	NA
WP_047730226.1\|4298379_4299684_-	relaxase/mobilization nuclease domain-containing protein	NA	NA	NA	NA
WP_047730227.1\|4299652_4300093_-	hypothetical protein	NA	NA	NA	NA
WP_063863018.1\|4300344_4300707_+	hypothetical protein	NA	NA	NA	NA
WP_140440698.1\|4300768_4301233_+	hypothetical protein	NA	NA	NA	NA
WP_154235534.1\|4301429_4301966_-	hypothetical protein	NA	NA	NA	NA
WP_012134294.1\|4303315_4303594_+	His-Xaa-Ser system protein HxsD	NA	NA	NA	NA
WP_047730229.1\|4303593_4304982_+	His-Xaa-Ser system radical SAM maturase HxsB	S5VT21	Leptospira_phage	6.3e-51	28.5
WP_071845381.1\|4304974_4306087_+	His-Xaa-Ser system radical SAM maturase HxsC	NA	NA	NA	NA
WP_071845382.1\|4306083_4306719_+	His-Xaa-Ser repeat protein HxsA	NA	NA	NA	NA
WP_080346909.1\|4306763_4310021_+	ATP-binding protein	NA	NA	NA	NA
WP_047730231.1\|4310188_4311454_-\|integrase	tyrosine-type recombinase/integrase	A0A1V0E8G8	Vibrio_phage	1.5e-104	47.3
4311657:4311679	attR	NA	NA	NA	NA

DBSCAN-SWA_7

4616016 : 4656023

Shigella_phage(55.26%)

plate,transposase,head,tail,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_071845285.1\|4616016_4617222_+\|transposase	ISL3 family transposase	NA	NA	NA	NA
WP_047730890.1\|4617504_4617705_+	protein DsrB	NA	NA	NA	NA
WP_033635078.1\|4617923_4618553_-	transcriptional regulator RcsA	NA	NA	NA	NA
WP_023279823.1\|4619134_4620058_+\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	9.6e-173	97.4
WP_080213379.1\|4620411_4621053_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_047730376.1\|4621462_4622173_-	hypothetical protein	A0A0C4UQZ7	Shigella_phage	5.0e-105	78.4
WP_080346914.1\|4622123_4622330_-	Com family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_047730377.1\|4622743_4623283_-\|tail	tail fiber assembly protein	Q6K1H1	Salmonella_virus	1.8e-30	44.6
WP_154235537.1\|4623279_4624929_-	hypothetical protein	A0A0C4UQS2	Shigella_phage	1.2e-29	53.4
WP_080346942.1\|4624943_4625477_-	DUF2313 domain-containing protein	C9DGQ7	Escherichia_phage	1.0e-54	58.2
WP_047730379.1\|4625473_4626553_-\|plate	baseplate J/gp47 family protein	A0A0C4UQU9	Shigella_phage	2.6e-121	60.7
WP_047730380.1\|4626553_4626991_-	hypothetical protein	A0A0C4UR04	Shigella_phage	5.5e-54	71.0
WP_047730381.1\|4626987_4627578_-\|plate	phage baseplate assembly protein V	A0A0C4UQZ3	Shigella_phage	5.7e-70	65.3
WP_047730382.1\|4627574_4628702_-\|plate	baseplate protein	C9DGQ3	Escherichia_phage	1.1e-138	66.1
WP_047730383.1\|4628688_4630158_-	hypothetical protein	A0A0C4UR32	Shigella_phage	1.7e-94	43.4
WP_047730384.1\|4630171_4632205_-	tape measure protein	A0A0C4UQU8	Shigella_phage	2.4e-123	48.3
WP_080346915.1\|4632331_4632811_-	hypothetical protein	A0A0C4UR03	Shigella_phage	1.5e-36	66.2
WP_047730385.1\|4632820_4633183_-	hypothetical protein	A0A0C4UQZ1	Shigella_phage	1.7e-32	61.2
WP_047730386.1\|4633192_4634701_-\|tail	tail protein	C9DGP7	Escherichia_phage	3.1e-189	67.2
WP_047730387.1\|4634697_4634922_-	DUF2635 domain-containing protein	A0A0C4UR31	Shigella_phage	3.6e-09	62.8
WP_047730388.1\|4634893_4635433_-	DUF1834 family protein	A0A0C4UQU7	Shigella_phage	9.5e-64	62.4
WP_047730389.1\|4635432_4635855_-	DUF1320 domain-containing protein	A0A0C4UR02	Shigella_phage	9.1e-38	57.9
WP_152903781.1\|4635851_4636253_-	hypothetical protein	NA	NA	NA	NA
WP_047730391.1\|4636359_4636632_-	hypothetical protein	NA	NA	NA	NA
WP_047730392.1\|4636689_4637646_-\|head	head protein	C9DGP2	Escherichia_phage	8.5e-116	64.3
WP_047730393.1\|4637645_4638755_-\|protease	protease	C9DGP0	Escherichia_phage	2.1e-86	51.4
WP_047730394.1\|4638969_4639452_-	phage virion morphogenesis protein	C9DGN8	Escherichia_phage	5.5e-47	60.6
WP_047730395.1\|4639463_4640783_-\|head	phage head morphogenesis protein	C9DGN7	Escherichia_phage	1.7e-159	64.7
WP_047730396.1\|4640766_4642332_-	DUF935 domain-containing protein	A0A0C4UQR8	Shigella_phage	4.1e-200	68.1
WP_047730397.1\|4642331_4643999_-	Mu-like prophage FluMu protein gp28	A0A0C4UR29	Shigella_phage	4.3e-256	80.4
WP_047730398.1\|4644001_4644580_-	DUF3486 family protein	A0A0C4UQU5	Shigella_phage	3.5e-80	82.3
WP_047730399.1\|4644589_4644877_-	hypothetical protein	A0A0C4UR00	Shigella_phage	4.7e-38	84.2
WP_047730400.1\|4644873_4645179_-	DUF2730 family protein	C9DGN2	Escherichia_phage	3.0e-14	47.2
WP_047730401.1\|4645171_4645390_-	hypothetical protein	NA	NA	NA	NA
WP_047730893.1\|4645393_4645573_-	hypothetical protein	A0A1W6JP52	Morganella_phage	1.0e-06	48.1
WP_049193136.1\|4645556_4645937_-	hypothetical protein	NA	NA	NA	NA
WP_047730402.1\|4645917_4646424_-	lysozyme	G0ZNC8	Cronobacter_phage	9.0e-48	55.6
WP_047730403.1\|4646542_4646968_-	hypothetical protein	A0A0C4UQZ9	Shigella_phage	1.6e-37	57.8
WP_047730404.1\|4647050_4647473_-	hypothetical protein	NA	NA	NA	NA
WP_047730405.1\|4647593_4648106_-	regulatory protein GemA	A0A0C4UQU3	Shigella_phage	1.2e-28	39.8
WP_047730895.1\|4648080_4648290_-	hypothetical protein	NA	NA	NA	NA
WP_047730406.1\|4648283_4648637_-	hypothetical protein	NA	NA	NA	NA
WP_053056862.1\|4648708_4649416_-	hypothetical protein	A0A0C4UQU2	Shigella_phage	4.2e-19	33.0
WP_047730407.1\|4649412_4649844_-	hypothetical protein	NA	NA	NA	NA
WP_152903779.1\|4649840_4650335_-	hypothetical protein	A0A0A7RUP4	Clostridium_phage	2.4e-05	37.0
WP_047730408.1\|4650324_4650591_-	hypothetical protein	NA	NA	NA	NA
WP_047730409.1\|4650696_4651221_-	host-nuclease inhibitor protein Gam	A0A0C4UQY5	Shigella_phage	2.3e-62	67.2
WP_152903778.1\|4651232_4651502_-	hypothetical protein	NA	NA	NA	NA
WP_047730410.1\|4651494_4651761_-	hypothetical protein	I6WB15	Burkholderia_virus	5.8e-14	54.8
WP_047730411.1\|4651844_4652066_-	hypothetical protein	NA	NA	NA	NA
WP_047730412.1\|4652062_4653016_-	AAA family ATPase	A0A0C4UQR3	Shigella_phage	5.6e-67	45.6
WP_047730413.1\|4653086_4655063_-	hypothetical protein	A0A2I7S9A8	Vibrio_phage	4.7e-177	50.2
WP_071845387.1\|4655059_4655302_-	transcriptional regulator	A0A0M4UV99	Ralstonia_phage	8.1e-15	55.1
WP_055312678.1\|4655534_4656023_+	hypothetical protein	A0A2D1GNK9	Pseudomonas_phage	3.7e-06	49.1

DBSCAN-SWA_8

5172324 : 5210762

Edwardsiella_phage(23.08%)

tRNA,terminase,integrase,head,tail,holin

attL 5168551:5168564|attR 5184140:5184153

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
5168551:5168564	attL	NA	NA	NA	NA
WP_047730588.1\|5172324_5173263_-\|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	A0A0U2S5Z2	Escherichia_phage	3.0e-137	92.6
WP_047730589.1\|5173311_5174568_-\|integrase	site-specific integrase	A0A0U2JGI6	Escherichia_phage	1.0e-148	60.3
WP_047730590.1\|5174567_5174780_-	hypothetical protein	A0A0U2RY08	Escherichia_phage	4.8e-19	59.2
WP_047730591.1\|5174843_5175029_-	hypothetical protein	NA	NA	NA	NA
WP_053056868.1\|5175022_5176141_-	hypothetical protein	A0A2I7RQF1	Vibrio_phage	2.2e-62	47.7
WP_080346926.1\|5176152_5179317_-	hypothetical protein	H6WRX1	Salmonella_phage	2.2e-136	39.5
WP_047730592.1\|5179835_5180141_-	hypothetical protein	NA	NA	NA	NA
WP_080346928.1\|5180515_5180953_-	HNH endonuclease	A0A0S1RTH0	Acinetobacter_phage	8.6e-23	42.0
WP_047730922.1\|5181227_5181611_-	helix-turn-helix domain-containing protein	K7PHG0	Enterobacteria_phage	8.9e-32	61.8
WP_047730593.1\|5181714_5181960_+	helix-turn-helix domain-containing protein	A0A0M4QX15	Salmonella_phage	6.7e-17	59.2
WP_047730594.1\|5181970_5182432_+	hypothetical protein	H9C162	Pectobacterium_phage	1.1e-17	44.0
WP_047730595.1\|5182447_5182699_+	hypothetical protein	NA	NA	NA	NA
WP_047730596.1\|5182695_5182890_-	hypothetical protein	NA	NA	NA	NA
WP_080346929.1\|5183965_5184502_+	replication protein	A0A0U2JGJ0	Escherichia_phage	1.3e-41	52.7
5184140:5184153	attR	NA	NA	NA	NA
WP_047730599.1\|5184539_5184791_+	hypothetical protein	NA	NA	NA	NA
WP_089191850.1\|5184985_5185225_+	hypothetical protein	H6WRY6	Salmonella_phage	8.3e-20	64.7
WP_047730601.1\|5185267_5185864_+	DUF1367 family protein	K7PKS6	Enterobacteria_phage	2.0e-94	84.2
WP_047730602.1\|5185868_5186150_+	DUF1364 family protein	K7P7Q1	Enterobacteria_phage	5.3e-42	86.8
WP_047730603.1\|5186149_5186839_+	antitermination protein	NA	NA	NA	NA
WP_047730604.1\|5187008_5187731_+	hypothetical protein	A0A0C4UQZ7	Shigella_phage	3.3e-88	68.1
WP_047730605.1\|5187798_5188134_+\|holin	phage holin, lambda family	Q2A0C6	Sodalis_phage	9.8e-19	45.2
WP_047730606.1\|5188137_5188776_+	glycoside hydrolase family 19 protein	Q8HA86	Salmonella_phage	6.2e-70	61.1
WP_047730607.1\|5188772_5189159_+	DUF2570 domain-containing protein	NA	NA	NA	NA
WP_047730608.1\|5189312_5189561_+	hypothetical protein	NA	NA	NA	NA
WP_053056871.1\|5189604_5190687_+\|terminase	terminase	A0A0U2RXW9	Escherichia_phage	1.4e-50	49.5
WP_089191841.1\|5190616_5192029_+\|terminase	PBSX family phage terminase large subunit	A0A077KAW0	Edwardsiella_phage	1.4e-186	69.9
WP_047730610.1\|5192028_5193573_+	DUF1073 domain-containing protein	A0A2R3UAL5	Myoviridae_environmental_samples	2.0e-98	43.9
WP_038875869.1\|5193613_5194297_+\|head	head morphogenesis protein	H9C0V1	Aeromonas_phage	5.4e-56	49.6
WP_047730611.1\|5194300_5195626_+	DUF2213 domain-containing protein	A0A219YCD3	Aeromonas_phage	3.6e-72	41.2
WP_047730612.1\|5195627_5196110_+	hypothetical protein	K4HYQ5	Acinetobacter_phage	3.4e-28	51.2
WP_047730613.1\|5196109_5197138_+	DUF2184 domain-containing protein	A0A219YBB0	Aeromonas_phage	3.5e-83	50.0
WP_047730614.1\|5197141_5197486_+	hypothetical protein	A0A1X9SFA9	Acinetobacter_phage	2.2e-13	39.6
WP_038875751.1\|5197489_5197960_+	DUF4054 domain-containing protein	K4HYQ8	Acinetobacter_phage	4.8e-11	37.0
WP_038875748.1\|5197960_5198440_+	hypothetical protein	I6ZXX4	Escherichia_phage	2.9e-08	30.5
WP_047730615.1\|5198436_5198802_+	hypothetical protein	NA	NA	NA	NA
WP_047730616.1\|5198786_5199338_+	hypothetical protein	NA	NA	NA	NA
WP_047730617.1\|5199318_5200803_+	DUF3383 domain-containing protein	A0A077KGV4	Edwardsiella_phage	3.0e-91	38.0
WP_038875737.1\|5200802_5201240_+	hypothetical protein	A0A077K9T0	Edwardsiella_phage	2.3e-20	38.1
WP_047730618.1\|5201239_5201644_+	hypothetical protein	H9C0W7	Aeromonas_phage	1.6e-18	43.8
WP_047730620.1\|5201852_5203862_+	transglycosylase SLT domain-containing protein	A0A0M4REK7	Salmonella_phage	1.1e-51	64.6
WP_047730621.1\|5203858_5204665_+	hypothetical protein	A0A077KGW3	Edwardsiella_phage	1.6e-27	37.4
WP_047730622.1\|5204664_5204967_+	hypothetical protein	A0A077K9U4	Edwardsiella_phage	1.3e-25	52.5
WP_038875720.1\|5204963_5205809_+	hypothetical protein	A0A077KC17	Edwardsiella_phage	2.5e-34	32.2
WP_047730623.1\|5205810_5206488_+	oxidoreductase	A0A077KAY0	Edwardsiella_phage	5.6e-37	39.8
WP_038875867.1\|5206496_5206853_+	hypothetical protein	A0A077KCA1	Edwardsiella_phage	9.1e-23	50.0
WP_047730624.1\|5206849_5208082_+	bacteriophage protein	A0A077KGW9	Edwardsiella_phage	7.6e-101	50.2
WP_047730625.1\|5208098_5208686_+	DUF2612 domain-containing protein	A0A2R3UAM9	Myoviridae_environmental_samples	5.0e-34	37.7
WP_053056872.1\|5208687_5210199_+	hypothetical protein	H9C0Y2	Aeromonas_phage	2.6e-26	51.6
WP_053056873.1\|5210201_5210762_+\|tail	tail assembly chaperone	A0A0C4UQZ5	Shigella_phage	9.0e-25	38.0

Anti-CRISPR protein detection

Acr_ID: NZ_CP011642.1|WP_047730856.1|3759625_3759886_+|hypothetical-protein

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_CP011642.1|WP_047730856.1|3759625_3759886_+|hypothetical-protein

3759625_3759886_+

86 aa aa

3757834-3786219

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location
NZ_CP011642_2	Orphan	2.14\|2105519\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2105519-2105550	32	3777723-3777692
NZ_CP011642_2	Orphan	2.20\|2105885\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2105885-2105916	32	3775970-3775939
NZ_CP011642_2	Orphan	2.29\|2106436\|32\|NZ_CP011642\|CRT,PILER-CR,CRISPRCasFinder	2106436-2106467	32	3785300-3785269

1. spacer 2.14|2105519|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP011642 position: 3777723-3777692, mismatch: 0

ctaaaatggcatggacacaatcttgcccaata	CRISPR spacer
ctaaaatggcatggacacaatcttgcccaata	Protospacer
********************************

2. spacer 2.20|2105885|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP011642 position: 3775970-3775939, mismatch: 0

cgtttcagcagatccacattgccgtaaagctg	CRISPR spacer
cgtttcagcagatccacattgccgtaaagctg	Protospacer
********************************

3. spacer 2.29|2106436|32|NZ_CP011642|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP011642 position: 3785300-3785269, mismatch: 0

atctggcgctgcgccggcgtcatggccacggc	CRISPR spacer
atctggcgctgcgccggcgtcatggccacggc	Protospacer
********************************

3. NZ_CP011639

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

11102 : 43241

Escherichia_phage(29.41%)

integrase,transposase

attL 4910:4926|attR 43518:43534

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4910:4926	attL	NA	NA	NA	NA
WP_109547143.1\|11102_12279_+\|transposase	IS3 family transposase	Q716C2	Shigella_phage	5.8e-122	67.2
WP_000052512.1\|12940_14416_+	ABC-F type ribosomal protection protein Msr(E)	A0A1B0RXA0	Streptococcus_phage	2.3e-160	59.0
WP_000155092.1\|14471_15356_+	Mph(E) family macrolide 2'-phosphotransferase	NA	NA	NA	NA
WP_001067855.1\|15439_16144_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_011191341.1\|16450_17725_-\|transposase	IS4-like element ISApu2 family transposase	NA	NA	NA	NA
WP_080346864.1\|17823_18033_+\|transposase	Tn3 family transposase	Q1MVP5	Enterobacteria_phage	1.1e-33	98.6
WP_047727532.1\|18057_19125_-	phosphoribosyltransferase	A0A0R6PHM5	Moraxella_phage	1.4e-34	35.7
WP_047727533.1\|19754_20180_-	antirestriction protein	A0A2D0W8Z5	Bordetella_virus	3.6e-18	38.1
WP_080346865.1\|20290_20569_-	hypothetical protein	NA	NA	NA	NA
WP_025367743.1\|21064_22444_-	hypothetical protein	D2XQ07	Bacillus_virus	3.5e-09	23.0
WP_071845218.1\|22616_22913_-	HigA family addiction module antidote protein	NA	NA	NA	NA
WP_047727535.1\|23530_24061_+	recombinase family protein	E5FFF9	Burkholderia_phage	1.8e-38	51.2
WP_001067855.1\|24107_24812_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_001389365.1\|27567_28332_-\|transposase	IS6-like element IS6100 family transposase	A0A077SL39	Escherichia_phage	4.3e-86	65.7
WP_004152391.1\|28434_30150_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_004152392.1\|30259_33289_+\|transposase	IS3-like element Tn4401 family transposase	NA	NA	NA	NA
WP_004199214.1\|33395_34421_+\|transposase	IS21 family transposase	A0A2L1IVA1	Escherichia_phage	1.4e-87	50.3
WP_004152394.1\|34417_35197_+	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	2.5e-89	61.8
WP_004199234.1\|35583_36465_+	carbapenem-hydrolyzing class A beta-lactamase KPC-2	A0A1B0VBP7	Salmonella_phage	2.2e-73	52.2
WP_004152397.1\|36714_38034_-\|transposase	IS1182-like element ISKpn6 family transposase	Q9MBP7	Staphylococcus_prophage	1.9e-12	24.2
WP_004152787.1\|38726_38867_+	hypothetical protein	NA	NA	NA	NA
WP_000376623.1\|38849_39350_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_000259031.1\|39477_40317_-	sulfonamide-resistant dihydropteroate synthase Sul1	A0A0B5J4J5	Pandoravirus	5.0e-11	27.2
WP_000679427.1\|40310_40658_-	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
WP_000470556.1\|40762_41053_-	DUF1010 domain-containing protein	NA	NA	NA	NA
WP_001317507.1\|41161_41635_-	trimethoprim-resistant dihydrofolate reductase DfrA5	G3MBI7	Bacillus_virus	1.0e-13	27.7
WP_000845048.1\|42227_43241_+\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
43518:43534	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

4. NZ_CP011641

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

12711 : 66730

Salmonella_phage(25.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_077253535.1\|12711_14058_+\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_004143398.1\|14106_14502_+	helix-turn-helix domain containing protein	NA	NA	NA	NA
WP_000509966.1\|14683_15289_-	DNA resolvase	A0A1S5Y2X8	uncultured_archaeal_virus	5.5e-20	35.3
WP_004206881.1\|15383_18281_+\|transposase	Tn3-like element Tn5403 family transposase	A0A1B0V7H9	Salmonella_phage	2.5e-182	37.8
WP_154235503.1\|19299_19992_-	hypothetical protein	NA	NA	NA	NA
WP_023279823.1\|20016_20940_+\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	9.6e-173	97.4
WP_143722351.1\|23831_24952_-\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	5.1e-51	42.4
WP_000019441.1\|28435_29416_+\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	2.3e-185	99.1
WP_000427623.1\|30806_31811_-\|transposase	IS110-like element IS4321 family transposase	NA	NA	NA	NA
WP_047062044.1\|31889_34862_-\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	0.0e+00	73.0
WP_001162012.1\|34864_35422_-	recombinase family protein	A0A1B0V7I5	Salmonella_phage	5.8e-48	81.3
WP_000993245.1\|35551_35764_-	DUF3330 domain-containing protein	NA	NA	NA	NA
WP_001446012.1\|35726_35846_+	hypothetical protein	NA	NA	NA	NA
WP_001087807.1\|35829_36066_-	broad-spectrum mercury transporter MerE	NA	NA	NA	NA
WP_001277466.1\|36062_36428_-	mercury resistance co-regulator MerD	NA	NA	NA	NA
WP_000209296.1\|36445_38131_-	mercury(II) reductase	A0A2K5B2C5	Erysipelothrix_phage	1.8e-39	29.1
WP_000522996.1\|38169_38595_-	organomercurial transporter MerC	NA	NA	NA	NA
WP_000732275.1\|38622_38898_-	mercury resistance system periplasmic binding protein MerP	NA	NA	NA	NA
WP_001294656.1\|38913_39279_-	mercuric ion transporter MerT	NA	NA	NA	NA
WP_001166628.1\|39350_39806_+	Hg(II)-responsive transcriptional regulator	NA	NA	NA	NA
WP_004200827.1\|40112_40541_-	hypothetical protein	NA	NA	NA	NA
WP_004200826.1\|40550_40835_-	hypothetical protein	A0A1S6L2Z2	Erwinia_phage	1.5e-07	43.2
WP_004099067.1\|42202_43060_-	incFII family plasmid replication initiator RepA	NA	NA	NA	NA
WP_014386216.1\|43052_43130_-	RepA leader peptide Tap	NA	NA	NA	NA
WP_004099069.1\|43345_43624_-	replication regulatory protein RepA	NA	NA	NA	NA
WP_009310009.1\|46224_46980_-	M48 family metallopeptidase	NA	NA	NA	NA
WP_043519709.1\|46976_50261_-	type I restriction endonuclease subunit R	A0A220A398	Liberibacter_phage	3.3e-66	27.4
WP_080346869.1\|50330_52115_-	cold shock domain-containing protein	NA	NA	NA	NA
WP_014386211.1\|52137_52821_-	YecA family protein	NA	NA	NA	NA
WP_014386210.1\|52817_54044_-	restriction endonuclease subunit S	NA	NA	NA	NA
WP_014386209.1\|54033_55557_-	type I restriction-modification system subunit M	A0A2H4PQP4	Staphylococcus_phage	7.0e-88	38.7
WP_047727549.1\|56992_59980_-\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	9.3e-294	53.3
WP_047368866.1\|60136_60553_+	hypothetical protein	NA	NA	NA	NA
WP_000493286.1\|61416_61746_+	type II toxin-antitoxin system RelE/ParE family toxin	A0A088CBP5	Shigella_phage	2.4e-09	44.2
WP_000780222.1\|61726_62008_+	helix-turn-helix transcriptional regulator	A0A2I6TC97	Escherichia_phage	1.3e-08	38.0
WP_001067858.1\|62437_63142_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.2e-138	99.6
WP_024555186.1\|63188_64328_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_016246540.1\|64556_65159_+	hypothetical protein	NA	NA	NA	NA
WP_104457020.1\|65502_66730_+\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	3.5e-170	95.7

DBSCAN-SWA_2

123733 : 174984

Macacine_betaherpesvirus(22.22%)

protease,transposase,integrase

attL 122802:122816|attR 152780:152794

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
122802:122816	attL	NA	NA	NA	NA
WP_102780076.1\|123733_125103_-\|transposase	IS3 family transposase	A0A2I6AZV9	Macacine_betaherpesvirus	1.2e-78	69.7
WP_038992719.1\|125291_125618_-	hypothetical protein	NA	NA	NA	NA
WP_047727561.1\|125614_126343_-	plasmid SOS inhibition protein A	NA	NA	NA	NA
WP_038992715.1\|126339_126771_-	conjugation system SOS inhibitor PsiB	NA	NA	NA	NA
WP_040196882.1\|126815_128816_-	ParB/RepB/Spo0J family partition protein	G8DH78	Emiliania_huxleyi_virus	1.8e-22	26.3
WP_004206771.1\|128884_129133_-	DUF905 domain-containing protein	NA	NA	NA	NA
WP_004206772.1\|129181_129724_-	single-stranded DNA-binding protein	A0A0A0P1Q9	Enterobacteria_phage	1.0e-49	75.8
WP_032426243.1\|130388_130709_-	hypothetical protein	NA	NA	NA	NA
WP_047727563.1\|130743_130998_-	DNA polymerase III subunit theta	H9C187	Pectobacterium_phage	6.8e-12	50.0
WP_004206777.1\|131234_131660_-	antirestriction protein	NA	NA	NA	NA
WP_004206779.1\|132180_132411_-	hypothetical protein	NA	NA	NA	NA
WP_040220197.1\|132644_134129_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.1e-29	34.1
WP_009309980.1\|134534_134960_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	2.9e-31	50.4
WP_004206782.1\|134959_136231_+	Y-family DNA polymerase	F1C5A5	Cronobacter_phage	8.6e-156	64.0
WP_047368872.1\|136309_136561_+	plasmid stabilization protein	NA	NA	NA	NA
WP_047368871.1\|136614_136920_+	hypothetical protein	NA	NA	NA	NA
WP_004206785.1\|138245_139217_-	ParB/RepB/Spo0J family plasmid partition protein	I3WF22	Macacine_betaherpesvirus	1.0e-148	86.3
WP_000523812.1\|139216_140383_-	plasmid-partitioning protein SopA	A0A2I6B2X3	Macacine_betaherpesvirus	3.0e-224	97.7
WP_000200070.1\|141133_142144_+	replication initiation protein	J9Q7H0	Salmonella_phage	3.0e-87	54.3
WP_022064517.1\|142841_143582_-\|integrase	site-specific integrase	I3WFA4	Macacine_betaherpesvirus	5.4e-25	58.6
WP_047727564.1\|143614_143890_+	hypothetical protein	NA	NA	NA	NA
WP_047368869.1\|144230_144479_-	type II toxin-antitoxin system ParD family antitoxin	NA	NA	NA	NA
WP_047727565.1\|146964_147774_-	hypothetical protein	NA	NA	NA	NA
WP_000533745.1\|147791_148154_-	hypothetical protein	NA	NA	NA	NA
WP_047727566.1\|148634_149909_+	RelB antitoxin	NA	NA	NA	NA
WP_047727567.1\|149926_150199_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_047727568.1\|150195_150879_+	hypothetical protein	NA	NA	NA	NA
WP_011091034.1\|150923_151142_+	hypothetical protein	NA	NA	NA	NA
WP_004187413.1\|151144_151354_+	hypothetical protein	NA	NA	NA	NA
WP_047727569.1\|151421_151655_+	hypothetical protein	NA	NA	NA	NA
WP_010466239.1\|152216_153086_-	LysR family transcriptional regulator	NA	NA	NA	NA
152780:152794	attR	NA	NA	NA	NA
WP_003118429.1\|153079_154090_-	phosphonate dehydrogenase PtxD	A0A1V0SBV6	Catovirus	1.8e-15	25.1
WP_010466252.1\|154098_154926_-	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA
WP_047727570.1\|154934_155798_-	phosphate/phosphite/phosphonate ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_047727571.1\|155794_156622_-	phosphonate ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.6e-20	37.6
WP_016156490.1\|156930_159939_-\|transposase	Tn3 family transposase	Q1MVP5	Enterobacteria_phage	0.0e+00	64.1
WP_004098989.1\|160098_160668_+	recombinase family protein	Q1MVP4	Enterobacteria_phage	2.0e-40	47.8
WP_004098990.1\|160675_162067_+	hypothetical protein	NA	NA	NA	NA
WP_004098991.1\|162063_164130_+	ATP-binding protein	NA	NA	NA	NA
WP_000019441.1\|165857_166838_-\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	2.3e-185	99.1
WP_011977761.1\|167620_167995_-	hypothetical protein	NA	NA	NA	NA
WP_001198018.1\|168106_169060_-	cation transporter	NA	NA	NA	NA
WP_085950818.1\|169287_170408_-\|transposase	IS3-like element ISSen4 family transposase	S5WIU1	Leptospira_phage	1.7e-51	42.8
WP_047727572.1\|170529_171081_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_047727573.1\|171238_171712_-	ribbon-helix-helix protein, CopG family	NA	NA	NA	NA
WP_047727574.1\|171714_172938_-	DUF4236 domain-containing protein	NA	NA	NA	NA
WP_047727575.1\|172948_173905_-	HpcH/HpaI aldolase/citrate lyase family protein	NA	NA	NA	NA
WP_044347237.1\|173904_174984_-\|protease	cysteine protease StiP family protein	A0A172Q0S8	Acinetobacter_phage	8.1e-38	32.7

DBSCAN-SWA_3

178569 : 189827

Caulobacter_phage(22.22%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_047727577.1\|178569_179154_+	tellurium resistance protein TerZ	K4JRX3	Caulobacter_phage	9.1e-12	29.9
WP_044348241.1\|179150_180308_+	tellurium resistance protein TerA	NA	NA	NA	NA
WP_044348239.1\|180330_180786_+	tellurium resistance membrane protein TerB	NA	NA	NA	NA
WP_047727578.1\|180809_181850_+	tellurium resistance membrane protein TerC	K7QKE8	Escherichia_phage	5.5e-76	47.1
WP_044348234.1\|181888_182467_+	tellurium resistance membrane protein TerD	A0A2P1N0L4	Streptomyces_phage	1.5e-06	40.0
WP_044348232.1\|182547_183123_+	TerD family protein	K4JRX3	Caulobacter_phage	3.3e-30	40.8
WP_047727579.1\|183210_184452_+	tellurium resistance protein TerF	A0A2D1GNA9	Pseudoalteromonas_phage	5.3e-09	26.7
WP_044348228.1\|184479_185130_-	HAD-IB family hydrolase	NA	NA	NA	NA
WP_098141133.1\|185303_186451_-\|transposase	IS3 family transposase	U5P429	Shigella_phage	7.8e-148	92.6
WP_047727581.1\|186511_186853_-	DUF305 domain-containing protein	A0A218MND9	uncultured_virus	8.5e-18	55.2
WP_000790483.1\|186996_187428_-	silver-binding protein SilE	NA	NA	NA	NA
WP_047727582.1\|187678_189154_-	copper/silver sensor histidine kinase SilS	W8CYF6	Bacillus_phage	1.1e-26	28.2
WP_047727583.1\|189146_189827_-	copper/silver response regulator transcription factor SilR	W8CYM9	Bacillus_phage	1.6e-31	35.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP011640

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP011642

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CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

Click the colored protein region to show detailed information

3. NZ_CP011639

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

4. NZ_CP011641

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection