CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
NZ_CP009743	Burkholderia contaminans strain MS14 chromosome 1, complete sequence	1 crisprs	csa3,c2c9_V-U4,DinG,cas3,DEDDh	3
NZ_CP009744	Burkholderia contaminans strain MS14 chromosome 2, complete sequence	0 crisprs	Cas14u_CAS-V,csa3,cas3,WYL,c2c9_V-U4	2
NZ_CP009745	Burkholderia contaminans strain MS14 chromosome 3, complete sequence	0 crisprs	RT,WYL,csa3,PD-DExK	1

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP009743_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009743_1

27879-27977

Orphan

Consensus_repeat	Method
GCTGCACCGCACGTCAATCTGGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP009743_1

>merge|NZ_CP009743|1|27879-27977|CRISPRCasFinder
GCTGCACCGCACGTCAATCTGGCGAGACTTAGGCGTGGAATGCGTCGATCCAGGCCTTCAATGTTCTCGGCCCTTGGCTGCGCCGCACGTCAATCTGGC

>NZ_CP009743|1|1|27879-27977|CRISPRCasFinder
GCTGCACCGCACGTCAATCTGGC	GAGACTTAGGCGTGGAATGCGTCGATCCAGGCCTTCAATGTTCTCGGCCCTTG
GCTGCGCCGCACGTCAATCTGGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009743.1\|WP_047849441.1\|30152_30896_-\|2OG-Fe(II)-oxygenase	unknown	unknown	gnl\|CDD\|378278
NZ_CP009743.1\|WP_047849446.1\|41664_42291_+\|LysE-family-translocator	unknown	unknown	gnl\|CDD\|224199
NZ_CP009743.1\|WP_046545496.1\|19602_21162_+\|DHA2-family-efflux-MFS-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|129794
NZ_CP009743.1\|WP_047849445.1\|38927_39884_-\|agmatinase	unknown	unknown	gnl\|CDD\|212538
NZ_CP009743.1\|WP_047849436.1\|7962_9393_-\|dihydrolipoyl-dehydrogenase	unknown	unknown	gnl\|CDD\|235779
NZ_CP009743.1\|WP_046545497.1\|16810_18307_+\|efflux-transporter-outer-membrane-subunit	unknown	unknown	gnl\|CDD\|273830
NZ_CP009743.1\|WP_039358989.1\|14075_15902_-\|translational-GTPase-TypA	unknown	unknown	gnl\|CDD\|224138
NZ_CP009743.1\|WP_046545502.1\|6766_7864_-\|cell-division-protein-ZapE	unknown	unknown	gnl\|CDD\|224402
NZ_CP009743.1\|WP_046549765.1\|37547_38873_-\|MHS-family-MFS-transporter	unknown	unknown	gnl\|CDD\|340927
NZ_CP009743.1\|WP_047849439.1\|18359_19574_+\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|185090
NZ_CP009743.1\|WP_081421018.1\|21299_21953_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|180295
NZ_CP009743.1\|WP_047849440.1\|28453_29878_+\|DHA2-family-efflux-MFS-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|182502
NZ_CP009743.1\|WP_047849442.1\|31190_32783_-\|inorganic-phosphate-transporter	unknown	unknown	gnl\|CDD\|376541
NZ_CP009743.1\|WP_047849437.1\|9476_10757_-\|2-oxoglutarate-dehydrogenase-complex-dihydrolipoyllysine-residue-succinyltransferase	unknown	unknown	gnl\|CDD\|235571
NZ_CP009743.1\|WP_047849438.1\|16231_16723_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_CP009743.1\|WP_047849444.1\|34449_36744_+\|5-methyltetrahydropteroyltriglutamate---homocysteine-S-methyltransferase	unknown	unknown	gnl\|CDD\|235367
NZ_CP009743.1\|WP_047849443.1\|33412_34321_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176132
NZ_CP009743.1\|WP_039339739.1\|41065_41530_-\|Lrp/AsnC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224439
NZ_CP009743.1\|WP_039339770.1\|40022_40934_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NZ_CP009743.1\|WP_046545499.1\|10892_13757_-\|2-oxoglutarate-dehydrogenase-E1-component	unknown	unknown	gnl\|CDD\|236499

Protein	Function_ID	Function_description	E-value
NZ_CP009743.1\|WP_047849441.1\|30152_30896_-\|2OG-Fe(II)-oxygenase	gnl\|CDD\|378278	pfam09859, Oxygenase-NA, Oxygenase, catalyzing oxidative methylation of damaged DNA. This family of bacterial sequences is predicted to catalyze oxidative de-methylation of damaged bases in DNA.	3.64426e-128
NZ_CP009743.1\|WP_047849446.1\|41664_42291_+\|LysE-family-translocator	gnl\|CDD\|224199	COG1280, RhtB, Putative threonine efflux protein [Amino acid transport and metabolism].	2.99435e-39
NZ_CP009743.1\|WP_046545496.1\|19602_21162_+\|DHA2-family-efflux-MFS-transporter-permease-subunit	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	4.16958e-157
NZ_CP009743.1\|WP_047849445.1\|38927_39884_-\|agmatinase	gnl\|CDD\|212538	cd11592, Agmatinase_PAH, Agmatinase-like family includes proclavaminic acid amidinohydrolase. This agmatinase subfamily contains bacterial and fungal/metazoan enzymes, including proclavaminic acid amidinohydrolase (PAH, EC 3.5.3.22) and Pseudomonas aeruginosa guanidinobutyrase (GbuA) and guanidinopropionase (GpuA). PAH hydrolyzes amidinoproclavaminate to yield proclavaminate and urea in clavulanic acid biosynthesis. Clavulanic acid is an effective inhibitor of beta-lactamases and is used in combination with amoxicillin to prevent the beta-lactam rings of the antibiotic from hydrolysis and, thus keeping the antibiotic biologically active. GbuA hydrolyzes 4-guanidinobutyrate (4-GB) into 4-aminobutyrate and urea while GpuA hydrolyzes 3-guanidinopropionate (3-GP) into beta-alanine and urea. Mutation studies show that significant variations in two active site loops in these two enzymes may be important for substrate specificity. This subfamily belongs to the ureohydrolase superfamily, which includes arginase, agmatinase, proclavaminate amidinohydrolase, and formiminoglutamase.	2.57158e-173
NZ_CP009743.1\|WP_047849436.1\|7962_9393_-\|dihydrolipoyl-dehydrogenase	gnl\|CDD\|235779	PRK06327, PRK06327, dihydrolipoamide dehydrogenase; Validated.	0
NZ_CP009743.1\|WP_046545497.1\|16810_18307_+\|efflux-transporter-outer-membrane-subunit	gnl\|CDD\|273830	TIGR01845, Outer_membrane_protein_OprM, efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family. Members of this model comprise a subfamily of the Outer Membrane Factor (TCDB 1.B.17) porins. OMF proteins operate in conjunction with a primary transporter of the RND, MFS, ABC, or PET systems, and a MFP (membrane fusion protein) to tranport substrates across membranes. The complex thus formed allows transport (export) of various solutes (heavy metal cations; drugs, oligosaccharides, proteins, etc.) across the two envelopes of the Gram-negative bacterial cell envelope in a single energy-coupled step. Current data suggest that the OMF (and not the MFP) is largely responsible for the formation of both the trans-outer membrane and trans-periplasmic channels. The roles played by the MFP have yet to be determined. [Cellular processes, Detoxification, Transport and binding proteins, Porins].	1.56672e-102
NZ_CP009743.1\|WP_039358989.1\|14075_15902_-\|translational-GTPase-TypA	gnl\|CDD\|224138	COG1217, TypA, Predicted membrane GTPase involved in stress response [Signal transduction mechanisms].	0
NZ_CP009743.1\|WP_046545502.1\|6766_7864_-\|cell-division-protein-ZapE	gnl\|CDD\|224402	COG1485, COG1485, Predicted ATPase [General function prediction only].	3.26423e-174
NZ_CP009743.1\|WP_046549765.1\|37547_38873_-\|MHS-family-MFS-transporter	gnl\|CDD\|340927	cd17369, MFS_ShiA_like, Shikimate transporter and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Escherichia coli shikimate transporter (ShiA), inner membrane metabolite transport protein YhjE, and other putative metabolite transporters. ShiA is involved in the uptake of shikimate, an aromatic compound involved in siderophore biosynthesis. It has been suggested that YhjE may mediate the uptake of osmoprotectants. The ShiA-like subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	6.09356e-137
NZ_CP009743.1\|WP_047849439.1\|18359_19574_+\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|185090	PRK15136, PRK15136, multidrug efflux MFS transporter periplasmic adaptor subunit EmrA.	2.42066e-160
NZ_CP009743.1\|WP_081421018.1\|21299_21953_+\|hypothetical-protein	gnl\|CDD\|180295	PRK05862, PRK05862, enoyl-CoA hydratase; Provisional.	3.82902e-31
NZ_CP009743.1\|WP_047849440.1\|28453_29878_+\|DHA2-family-efflux-MFS-transporter-permease-subunit	gnl\|CDD\|182502	PRK10504, PRK10504, putative transporter; Provisional.	6.235e-84
NZ_CP009743.1\|WP_047849442.1\|31190_32783_-\|inorganic-phosphate-transporter	gnl\|CDD\|376541	pfam01384, PHO4, Phosphate transporter family. This family includes PHO-4 from Neurospora crassa which is a is a Na(+)-phosphate symporter. This family also contains the leukaemia virus receptor.	2.44113e-54
NZ_CP009743.1\|WP_047849437.1\|9476_10757_-\|2-oxoglutarate-dehydrogenase-complex-dihydrolipoyllysine-residue-succinyltransferase	gnl\|CDD\|235571	PRK05704, PRK05704, 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase.	0
NZ_CP009743.1\|WP_047849438.1\|16231_16723_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	5.00859e-24
NZ_CP009743.1\|WP_047849444.1\|34449_36744_+\|5-methyltetrahydropteroyltriglutamate---homocysteine-S-methyltransferase	gnl\|CDD\|235367	PRK05222, PRK05222, 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; Provisional.	0
NZ_CP009743.1\|WP_047849443.1\|33412_34321_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176132	cd08441, PBP2_MetR, The C-terminal substrate binding domain of LysR-type transcriptional regulator metR, which regulates the expression of methionine biosynthetic genes, contains type 2 periplasmic binding fold. MetR, a member of the LysR family, is a positive regulator for the metA, metE, metF, and metH genes. The sulfur-containing amino acid methionine is the universal initiator of protein synthesis in all known organisms and its derivative S-adenosylmethionine (SAM) and autoinducer-2 (AI-2) are involved in various cellular processes. SAM plays a central role as methyl donor in methylation reactions, which are essential for the biosynthesis of phospholipids, proteins, DNA and RNA. The interspecies signaling molecule AI-2 is involved in cell-cell communication process (quorum sensing) and gene regulation in bacteria. Although methionine biosynthetic enzymes and metabolic pathways are well conserved in bacteria, the regulation of methionine biosynthesis involves various regulatory mechanisms. In Escherichia coli and Salmonella enterica serovar Typhimurium, MetJ and MetR regulate the expression of methionine biosynthetic genes. The MetJ repressor negatively regulates the E. coli met genes, except for metH. Several of these genes are also under the positive control of MetR with homocysteine as a co-inducer. In Bacillus subtilis, the met genes are controlled by S-box termination-antitermination system. This substrate-binding domain shows significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.77987e-103
NZ_CP009743.1\|WP_039339739.1\|41065_41530_-\|Lrp/AsnC-family-transcriptional-regulator	gnl\|CDD\|224439	COG1522, Lrp, Transcriptional regulators [Transcription].	1.6835e-44
NZ_CP009743.1\|WP_039339770.1\|40022_40934_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	2.03021e-37
NZ_CP009743.1\|WP_046545499.1\|10892_13757_-\|2-oxoglutarate-dehydrogenase-E1-component	gnl\|CDD\|236499	PRK09404, sucA, 2-oxoglutarate dehydrogenase E1 component; Reviewed.	0

>NZ_CP009743.1|WP_081421018.1|21299_21953_+|hypothetical-protein
MLDRKALQALGCWTGYRLERVEWPEGEGRTLSLHLKPVSKVMYCEQCGARCHQIHETTVRRVRDLPLFEYRVVLHVPRRRVWCERCGGPRLEKLAWLGRYQRVTERFAKACEKLLQAASIQAVAAFYDLGWHTVKSIDKMRLQARVAEPDWSTIRYLAMDEFALHKGHRSVNRAYETTLAEGVHFERRLFHSLFATEDQKEGMAAFVEKRKPVFKNR
>NZ_CP009743.1|WP_046545496.1|19602_21162_+|DHA2-family-efflux-MFS-transporter-permease-subunit
MAQAPVSHPPLQGGQLVIGTIAVSLAVFMNVLDTSIANVAIPTISGDLGVSSDQGTWVITSFAVANAISVPLTGWLTDRFGQVRLFLASIILFVISSWMCGLSPNLPFLLGSRVLQGAVAGPMIPLSQALLLSSYPRAKAPMALALWAMTTLIAPVAGPILGGWISDNYSWPWIFYVNIPVGIAAAGATWAIYRNRESAVRRAPIDGVGLALLVVWVGSLQIMLDKGKDLDWFASTTIIVLALTAVIAFAFFVIWELTAEHPVVDLSLFRMRNFTGGTVALSIGYGLYFGNLVLLPLWLQTQIGYTATDAGLVMAPVGLFAILLSPLTGKYLPRTDPRFISTASFLTFALCFWMRSRYTTGVDEWSLTLPTLVQGIAMAGFFIPLVSITLSGLPGHRIPAASGLSNFVRIMCGGIGTSIFQTAWDHRNNFHHAQLVEQTNVYNPTFNQAVTQMGNLGLTQDQAHGLINNMATQQAAQLGVNDLFYISAAIFVLLIGLIWITKPERSGGGDAGAAASAAH
>NZ_CP009743.1|WP_047849439.1|18359_19574_+|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit
MSDQQNAAGAQPQNNGKRKRMMTLLVAVIVIAAIAYGLYYFLMARFHEGTDDAYVNGNVVQITPQVTGTVIAVKADDTQTVKAGDPLVVLDPADSQVALQQAEANLAQTVRQVRGLFVNDDQYRAQVALRQSDLSKAQDDLRRRLAVAQTGAVSQEEISHARDAVKAAQASVDAAQQQLASNRALTANTTIASHPNVMAAAAKVRDAYLANARNVLPAPVTGYVAKRSVQVGQRVSPGNPLMSVVPLNAVWVDANFKEVQLKHMRIGQPVEMTADIYGSSVTYHGKVVGFSAGTGSAFSLLPAQNATGNWIKVVQRLPVRIELDPKDLDKHPLRIGLSMQVDVDIKDERGDQLVNAPNTVYETNVFAKYGDEADAEIARIVAENAGGNASAPAASKSNAVAKMM
>NZ_CP009743.1|WP_046545497.1|16810_18307_+|efflux-transporter-outer-membrane-subunit
MKSSPLSVRAGSCRAAVAAAVAALALAGCANYIGIKSDKQIAPVSQFESAQSLPAQGGQWPALDWASQFGDPQLPKLIDEALQGNPSIAQAQARIAKASSYIESSRSNLMPKAEASYSWTRELYSSNALFPPPYGGQWYSENNALASASWELDLWGKNRERLHTAVSQEKAAEADMQQARITLASSVARTYNSLAQLYALRDIAQREITNRETVGKITDGRVSAGLDTNVERQTARGNIATTQASLSDLDGQITTVRYQLAALLGKGPDRGLQIAAPVLNPSGEVALPGNLPADLVSRRPDIVAARWQVEAAMHDVKEAKAEFYPDVNLAAGFGFDAFGWGKFLNFASRQAQFGPAIHLPIFDAGALRAQLKGRYADFDLSVANYNQTLISALNDVATQVASIRAVDRQMGDAQRALDASTRAYDLAVIRYKAGLSPQLQVLTADSNRLASEQTVTNLKMRRRDMQLALIKALGGGFDATGTPLAAPDADKPTKQAAN
>NZ_CP009743.1|WP_047849438.1|16231_16723_+|MarR-family-transcriptional-regulator
MSDSSTQPPVSPLSSYQMNDSVGYLMSRVKSVMTNLVTQRTQEELGITGTQASMLFMIAVGKCSTAAELAREYGIDASAVTRLLDRVEKRGLLSRVRSIEDRRVVRLELTNEGRALAERLPPIFRSVLDQVLDGFTPEEVGFLKSMLRRILSNYCETAGGSIT
>NZ_CP009743.1|WP_039358989.1|14075_15902_-|translational-GTPase-TypA
MTRALRNIAIIAHVDHGKTTLVDQLLRQSGTFRENQQIAERVMDSNDIEKERGITILAKNCAVEYEGTHINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTKKALALGLKPIVIVNKIDRPGARIDWVINQTFDLFDKLGATEEQLDFPIVYASGLNGYASLDPAAREGDMRPLFEAVLEHVPVRPADPDAPLQLQITSLDYSTYVGRIGVGRITRGRIKPGQPVAMRFGPEGDVLNRKINQVLSFTGLERVQVESAEAGDIVLINGIEDVGIGATICAVDTPEALPMITVDEPTLTMNFLVNSSPLAGREGKFVTSRQIRDRLMKELNHNVALRVKDTGDETVFEVSGRGELHLTILVENMRREGYELAVSRPRVVMQEIDGVRHEPYELLTVDVEDEHQGGVMEELGRRKGEMLDMASDGRGRTRLEYKISARGLIGFQSEFLTLTRGTGLMSHIFDSYAPVKDGSVFERRNGVLISQDDGAAVAYALWKLQDRGRMFVKPGDALYEGMIIGIHSRDNDLVVNPIKGKQLTNVRASGTDEAVRLVPPVQMSLEYAVEFIDDDELVEVTPQSIRLRKRFLKEHERRRASREGAVD
>NZ_CP009743.1|WP_046545499.1|10892_13757_-|2-oxoglutarate-dehydrogenase-E1-component
MSDVMKQFQLNSYLFGGNASYVEELYDAYLNNPASVPENWREYFDALQNVPATDGSNANDVAHFPIVESFAERAKANAFIPRESTTNLAAARKQVHVQSLISAYRFLGSQWANLDPLKRRERPAIPELEPAFYDFSEGDLDQTYSASNLYFGFDQASLRDIVKGLRDTYCGTIGAEYMYISDPEQKRWWQERLESTRATPNFSADEKKHILNRLTAAEGLERYLHTKYVGQKRFSLEGGESFIAAMDEVVQHAGKRGVQEIIIGMAHRGRLNVLVNTLGKMPADLFAEFEGKHVDDLPAGDVKYHKGFSSDVSTEGGPVHLSLAFNPSHLEIVNPVVEGSAKARMDRRGDEDGLQVLPVQIHGDAAFAGQGVVMETLNLAQTRGYGTHGTLHIVINNQIGFTTSDPRDARSTLYCTDVVKMIEAPVLHVNGDDPEAVVLAIQIAIDYRMQFHKDVVIDIVCFRKLGHNEQDTPAVTQPLMYKKIAQHPGTRALYAEKLVQQGVITAEDADNFVKAYRKAMDDGHHTVDPVLSNYKSKYAVDWVPFLNRKWTDAADTAVPLAELKRLGERITTVPENFKVHPLVERVINDRRNMARGDQPLDWGMGEHLAFASLVASGYSVRLTGQDSGRGTFTHRHAVLHDQNRERWNDGTYVPLQNIAEGQAKFTVIDSVLSEEAVLGFEYGYSTAEPNTLVLWEAQFGDFVNGAQVVIDQFISSGEVKWGRVSGLTMLLPHGYEGQGPEHSSTRIERFLQLCADHNMQVVQPTTPAQIFHLLRRQMIRLFRKPLIVATPKSLLRHKEAVSDLSELAKGSFQPVLGETDGGIDAKKVKRVLACSGRVYYDLVAHRREAKANDVAIIRIEQLYPFAHKQFEAEMKKYENATEVVWVQDEPQNQGPWFYVEHHLKEGMKEGQKLAYSGRPASASPAVGYYAKHYEQQKALIEGAFGRLKSASIAK
>NZ_CP009743.1|WP_047849437.1|9476_10757_-|2-oxoglutarate-dehydrogenase-complex-dihydrolipoyllysine-residue-succinyltransferase
MAIVEVKVPQLSESVSEATMLQWKKKPGEAVAQDEILIELETDKVVLEVPAPAAGVLAQVLQNDGDTVVADQLIATIDTEAKAGAAEAAAGAAEVKPAAAPAAAAPAAQPVAAAAAASSTTASPAASKLLAEKGLSAGDVAGSGRDGRVTKGDALAAGSAPKAAPAAAPAKTAAAKPSLPEVKVPASAATWLNDRPEQRVPMSRLRARIAERLLESQQTNAILTTFNEVNMAPVMELRNKYKDKFEKEHGVKLGFMSFFVKAAVHALKKFPLVNASIDGNDIVYHGYFDIGIAVGSPRGLVVPILRNADQLSLAEIEKKIAEFGQKAKDGKLSIEEMTGGTFSISNGGVFGSMLSTPIINPPQSAILGVHATKERPVVENGQIVIRPINYLALSYDHRIIDGREAVLSLVAMKDALEDPARLLLDL
>NZ_CP009743.1|WP_047849436.1|7962_9393_-|dihydrolipoyl-dehydrogenase
MSKEFDVVVIGAGPGGYIAAIRAAQLGKTVACIEKWKNPAGALKLGGTCLNVGCIPSKALLASSEEFENTSHHLADHGITVDGVKIDVAKMLGRKDAIVEKMTSGIEFLFKKNKITWLKGHGKFTGKTDAGVQIEVSGEGETEVVTAKNVIIATGSKARHLPGIPVDNKIVSDNEGALTFDSVPKKLAVIGAGVIGLELGSVWRRLGAEVTVLEALPAFLGAADEALAKEAAKLFKKQGLDINLGVKIGEVKTTADGVSIAYTDKDGNAQTLDADRLIVSVGRVPNTDNLGLEAIGLKANERGFIDVDDHRRTAVPNVYAIGDVVRGPMLAHKAEDEGVLVAEVIDGQKPHIDYNCIPWVIYTYPEIAWVGKTEQQLKAEGREIKSGKFPFSINGRALGMNAPDGFVKMIADAKTDELLGVHVIAANASDLIAEAVVAMEFKAASEDIARICHPHPSMSEVMREAALAVDKRSLNS
>NZ_CP009743.1|WP_046545502.1|6766_7864_-|cell-division-protein-ZapE
MNVTEYYTRELTTRGYQSDPAQRAAVDRLQQCFDEWVEYKARRSNAFKKLINHPDLPRGVYMWGGVGRGKSFLMDSFFAVVPVQRKTRLHFHEFMREVHRELEELKGQADPLDELARRIAKRYRLICFDEFHVSDIADAMILYRLLDRLFNNGVQFVMTSNYDPDDLYPDGLHRDRMLPAIALIKSKLDVLNVDAGVDYRQRTLAQVKMYHTPLGADADRELRHAFGKLAAVPDESPILHIEKRELKALRKADGVVWFDFATLCGGPRSQNDYLELASRFHAIVLSEVPQMSPRMASEARRFTWLIDVLYDHKVKLLMSAAVPAEQLYIEGPMANEFARTVSRIVEMQSKEYIETPRRIVDTSLT
>NZ_CP009743.1|WP_047849440.1|28453_29878_+|DHA2-family-efflux-MFS-transporter-permease-subunit
MTDSPAQGGRTTDFLPYLVAATFFMEYLDTTVIATALPQMASSFGVGPNALSLGMTAYMLALAVFIPISGWIADRYGSRTVFASAIVVFTGASVLCGLSEGVVTFTAARLLQGVGGAMMVPVGRMIVVRSTEKAKLMRAIATITWPGIVAPVVGPPIGGFITTYASWRWIFLLNVPFGIAALVCTWLIVRNTRADEQRPLDWVGFVLAGGALTCLLIGTEAAGQQDVHFTRAAVLVGASVLFGIAAWWHAQRCTHPLLDFTTLKVPTFSVTVITGSITRMAINAVPYLLPLLFQIGFGLSPFQSGLLLLASALGNLGMKAGTSWILDRFGFRRVALVDVTIVGLFTIACGWLTASTPLAITLFVVFVYGLTRSMQFTTLATLAYADIPARQTSAASTLWSAAQQMTIGMGIAFGALSLRLAALVRGDAAGMHYVLDDFRWAFVAAGVLALLTLPGYARLASDAGDRLRANVARG
>NZ_CP009743.1|WP_047849441.1|30152_30896_-|2OG-Fe(II)-oxygenase
MNIADLQPAVESLEIAQRVDAIDWATVDADLDRYGCARVPGLISASECAALASLYPHDALYRSRVVMARHGFGRGEYKYFAYPLPTIIAELRATIYPHLAPIANRWNKALGIDVRYPADHAAFLDRCHATGQTRPTPLILQYGADDYNCLHQDLYGEHVFPLQVAVLLSVPGRDFTGGEFVLTEQRPRMQSRAEVVPLTQGDAVIFAVHGRPVQGTRGVYRVNLRHGVSRIRSGHRHTVGIIFHDAL
>NZ_CP009743.1|WP_047849442.1|31190_32783_-|inorganic-phosphate-transporter
MNQPASSARNNSGSVERTKQLGYVVFLLVLAIGAVYIATHLVDDLSPMREGSLFPYLMLGAALLIALGFEFVNGFHDTANAVATVIYTHSLTPNVAVIWSGMWNFLGVMVSSGAVAFGILQLLPVELILQVGSGAGFAMVFALLIAAIVWNLATWYFGLPSSSSHTLIGSIIGVGLMNQLMHGPSGTSGVDWGQALGVGKSLLLSPLVGFLCAALLLLVLKTLVRIPELYKEPPKDQPPPFWIRCLLILTCTGVSFAHGSNDGQKGMGLIMLILIGTVPTAYALNKAVTPAETQTFVAVANQAAVTFGKYTNGVAPSANPRADVELYVQHRELTPAVIPAVQQLSTSLATAVGASGSMAAVPQRDVDNVRNTMYLVSEAIRLIEKSGQPAFAADDKLAIDNYRKQLDHATKFIPTWVKVAVAIALGLGTMVGWKRIVVTVGEKIGKQHLTYGQGASAELVAMLTIGAADVYGLPVSTTHVLSSGVAGTMAANGSGLQWGTVRSLVLAWVLTLPASIVLAGGLYWLFRSVA
>NZ_CP009743.1|WP_047849443.1|33412_34321_-|LysR-family-transcriptional-regulator
MLERFHLVVIREVERQGSLTAAANALHLTQSALSHTVRKIEQQLGTPIWDREGRGLRLTQGGQYLLKLAHRLLPQFELAEERMKQYAKGERGTLRIGMECHPCYQWLLKVVSPYLSRWPDVDVDVKQRFQFGGIGALFGYDIDVLVTPDPLNKPGLHFDPVFDYEQVLVVADSHRFANADYVTPEQLTDEILITYPVETDRLDIYNQFLTPAGIVPRRHKSIETTDIMLQMVASERGVAALPRWLADEYADRMPVVPVKLGKKGIAKQIFLGIRDADASVDYLAAFVALARESTWSAPRMLR
>NZ_CP009743.1|WP_047849444.1|34449_36744_+|5-methyltetrahydropteroyltriglutamate---homocysteine-S-methyltransferase
MVTTHNLGFPRIGAKRELKFGLERYWKGESSRDELKALGAELRQRHWNDQRGLDLAPIGDFAFYDQVLDMSFTLGNLPKRVQGFHGDGLDNYFRVARGRSAQSADAHAACCGGVAAGEMTKWFDTNYHYIVPEFHADTNFSLDPSRLLQQLAEAQAQGVAAKPVILGPVTYLWLGKAKDDSDRLALLPKLLPVYGALLDTLTAQGVEWVQIDEPILVTELDAEWQQAFETAYAALETRRIKVLLGTYFGQLQGNLALASSLSVDGLHVDAISARDEVAALVRELPAGRVLSVGAINGRNIWKTDLNATLDWLEPLAKQLGDRLWLAPSCSLLHVPVDLASEEKLDAEIRSWLAFALQKLDELKVLATALNEGRDVVADALAANAAAIHSRRHSPRVNNPVVKAAIARIDAQLGNRVSPYTERAPKQSARLNLPAFPTTTIGSFPQTGEIRQARSQFKAGTLDEAGYRAAMQAEIERSVREQESLELDVLVHGEAERNDMVEYFGEQLDGYAFSQFGWVQSYGSRCVKPPILFGDISRRKAMTVEWITYAQSLTNKPMKGMLTGPVTILNWSFVRDDQPRSVSCYQLALAIREEVLDLEKAGVRVIQIDEAALREGLPLRRAQWDEYLKWAVESFRITANGVQDDTQIHTHMCYSEFNDIIASIADMDADVITIETSRSDMELLDAFDDFKYPNEIGPGVYDIHSPNIPTQEHIVGLMKKAAERIPAERLWVNPDCGLKTRQWAEVIPALTNMVAAAKTLRNPVQ
>NZ_CP009743.1|WP_046549765.1|37547_38873_-|MHS-family-MFS-transporter
MGTSVKQPKRAALASFVGTTIEWYDFYSYATAAAIVFGPLFFPGENRFISLLASFGSFAVGFFARPLGGVMFGYLGDRFGRKRSLLATLMLMAVSTVAIGLLPTHAQAGVIAPILLVLMRVLQGIAVGGEWGGAVLLAGEHAPEGKRTFFASFAQLGSASGLILSMLAFGAISTLSKDDMMSWGWRVPFLASSVLLIVGFVIRASVSESPEFEEVKKSGNIAQKPLREALKYWPLLLLAIGANVYGIAGVYFSNIFMISYATQFLSLDRSMVLHCMTIVAVLQFVVQLAAAFLAQRFGTTRVLLITGAWAAIVPFVMLPLVHMGTPLSITVGVGLATLAESGYYSVVAGFVSGIFVARIRYTAISIAYQVCGALAGGLTPLVATIIAQNTAPQWWPLALQYTSAAILSSLCVWLISRRVSIDDAGSANRTEETLPRGVRAA
>NZ_CP009743.1|WP_047849445.1|38927_39884_-|agmatinase
MNDHTHFQPLGGNEMPRCGGIATMMRLPHVASAEGLDACFVGVPFDLGTSNRTGARFGPRQIRTESVLLRPYNMATRAAPFDSLQIADVGDVAINPYNLHDSIARIEAAYDAILEHDCKPITLGGDHTIALPILRAIHRKHGKVALIHVDAHADVNDTMMGEKIAHGTPFRRAVEEGLLHGDKVTQIGLRGTGYAAEDFDWCREQGFRVVQAEECWNKSLAPLMEEVRARIGDTPVYITFDIDGIDPAYAPGTGTPEIAGLTVPQALEIIRGAKGLNIVGCDLVEVAPPYDPFGTTALLGANLAYELLCVLPGVAYRD
>NZ_CP009743.1|WP_039339770.1|40022_40934_+|LysR-family-transcriptional-regulator
MLGNLSTLDLRLIRVFLAVTEAGGVSAAQAVLNVGQSTISAQLSSLETRLGYRLCERGRSGFRLTPKGERFHAMSRKLLAALDEFGMAARHMDRQLVGTLHIGLIGHTPVSQNARIAEAIAAFRTRDEAVRFSISVRAPGDLEEKLLSDEIQIAVGYFWHRVPTLHYTPLFIERQVAYCGRGHPLFDGAGALTPADVAGFEWAWRSYPLPEAQMSTTPDRVTATADNMEAVALLILSGHHLGYLPQHFAAPYVAQGLLTPLNPEQLRYDVTFHMVVARNGRGNPLVEAFLEDLEHAHQPPDIA
>NZ_CP009743.1|WP_039339739.1|41065_41530_-|Lrp/AsnC-family-transcriptional-regulator
MTELDKTDRAILAAVQRDGRLPIARLADSVGLSETPCARRLKRLESDGYIERYRAQLSRQALGFGVVAFVLVRFATHDRKTADRFEREVLGIERILACHNVAGTADYLLQVVARDLDDYGTFLRESLRMLPGVTSIESALSLREVKHDAGLPVP
>NZ_CP009743.1|WP_047849446.1|41664_42291_+|LysE-family-translocator
MISTHLLLIYLAALAAIYAVPGPDMALVLQTSIGRGVRPGVAAAAGLSLARTAHVTLSACGVAALIRSAPWLYEVIRYGGALYLAYVAIQVFRSPVFALGDGDAAATAGELRQSFVKGLLTNLLNPKALLFCSVLLPQFVRPEAGPVVLQMFELGALLVAAGVCFDLACVFGASRIAAWMRAHPLAQTVQRWTFSAALIGFALRLSMD

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

2379167 : 2387456

Yaba_monkey_tumor_virus(16.67%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_047850525.1\|2379167_2380088_+	alpha/beta hydrolase	Q6TUZ7	Yaba_monkey_tumor_virus	3.0e-17	27.6
WP_047850526.1\|2380120_2381044_-	histone deacetylase family protein	A0A2K9KZC4	Tupanvirus	3.9e-41	34.9
WP_081421082.1\|2381087_2382431_+	lytic murein transglycosylase B	NA	NA	NA	NA
WP_047850527.1\|2382510_2383413_-	cysteine synthase CysM	A0A1X9I5F1	Streptococcus_phage	1.1e-53	40.5
WP_047850528.1\|2383625_2383967_-	competence protein ComE	NA	NA	NA	NA
WP_039343257.1\|2384041_2385034_-	ADP-glyceromanno-heptose 6-epimerase	R9S880	Prochlorococcus_phage	1.5e-27	31.5
WP_011351339.1\|2385097_2386048_-	D-glycero-beta-D-manno-heptose-7-phosphate kinase	A0A2H4N7X4	Lake_Baikal_phage	3.4e-16	27.4
WP_047850529.1\|2386055_2387456_-	UDP-glucose/GDP-mannose dehydrogenase family protein	A0A127AXI2	Bacillus_phage	2.3e-77	38.1

DBSCAN-SWA_2

2573708 : 2584185

Enterobacteria_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_047850614.1\|2573708_2577428_-	glycosyltransferase	A0A1X9SJW0	Sulfolobus_islandicus_rod-shaped_virus	3.7e-05	26.0
WP_047851118.1\|2577427_2578756_-	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_046545068.1\|2579111_2580557_-	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	A0A1V0SH58	Hokovirus	3.7e-54	28.5
WP_047850615.1\|2580789_2581674_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	1.2e-26	36.6
WP_047850616.1\|2581682_2582234_-	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	8.0e-50	53.0
WP_046545065.1\|2582218_2583112_-	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	6.3e-97	58.5
WP_047850617.1\|2583123_2584185_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	3.7e-88	46.7

DBSCAN-SWA_3

2703603 : 2712701

unidentified_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_046544993.1\|2703603_2705154_+	polynucleotide adenylyltransferase PcnB	H7BUW3	unidentified_phage	1.1e-22	31.0
WP_046544992.1\|2705189_2705732_+	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA
WP_047850666.1\|2705728_2706415_+	deoxynucleoside kinase	A0A0M3UL55	Enterococcus_phage	1.4e-06	25.4
WP_046544991.1\|2706460_2707276_+	3-methyl-2-oxobutanoate hydroxymethyltransferase	A0A0N7HVJ8	Ostreococcus_lucimarinus_virus	2.0e-36	32.5
WP_047850667.1\|2707396_2709331_-	bifunctional anthranilate synthase component I family protein/class IV aminotransferase	S4VNU7	Pandoravirus	6.9e-56	36.7
WP_046544989.1\|2709344_2710481_-	molecular chaperone DnaJ	E3T4P7	Cafeteria_roenbergensis_virus	9.1e-24	39.1
WP_046544988.1\|2710748_2712701_-	molecular chaperone DnaK	A0A1V0SH73	Hokovirus	1.6e-148	49.8

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP009744

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

969686 : 997318

Burkholderia_phage(50.0%)

plate,protease,integrase

attL 963841:963856|attR 984302:984317

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
963841:963856	attL	NA	NA	NA	NA
WP_046544802.1\|969686_970214_+\|protease	ClpXP protease specificity-enhancing factor	A0A1S5R3H3	Pseudomonas_phage	9.7e-21	52.0
WP_081421165.1\|970384_970600_-\|integrase	integrase	E5E3T0	Burkholderia_phage	1.2e-25	76.2
WP_081421166.1\|970649_971108_-	hypothetical protein	E5E3T0	Burkholderia_phage	6.4e-53	83.5
WP_124473431.1\|971552_971810_-	hypothetical protein	NA	NA	NA	NA
WP_047851554.1\|972370_973105_-	response regulator transcription factor	NA	NA	NA	NA
WP_081421264.1\|973106_974492_-	hypothetical protein	NA	NA	NA	NA
WP_047851556.1\|974606_975149_+	hypothetical protein	NA	NA	NA	NA
WP_011350748.1\|975506_975710_+	hypothetical protein	NA	NA	NA	NA
WP_046544806.1\|975769_976570_-	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_047851557.1\|976893_980073_+	type VI secretion system tip protein VgrG	A0A2H4JCD4	uncultured_Caudovirales_phage	9.3e-58	28.6
WP_152034446.1\|984771_985353_+	hypothetical protein	NA	NA	NA	NA
984302:984317	attR	NA	NA	NA	NA
WP_046544808.1\|986014_986356_+	hypothetical protein	NA	NA	NA	NA
WP_047851558.1\|986619_986937_+	hypothetical protein	NA	NA	NA	NA
WP_046544810.1\|987026_987809_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_039352024.1\|987805_989152_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_039352027.1\|989255_989867_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_046544811.1\|990241_990871_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_027783377.1\|990917_991433_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_006477094.1\|991448_992939_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_006477093.1\|993009_993513_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_046544812.1\|993855_994341_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_039352038.1\|994418_996254_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_047851559.1\|996217_997318_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA

DBSCAN-SWA_2

3157387 : 3208117

Pseudomonas_phage(34.38%)

protease,head,tail,portal,plate,terminase,integrase,capsid,holin

attL 3191506:3191522|attR 3211954:3211970

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_047852443.1\|3157387_3158176_-	DNA adenine methylase	Q8W6S4	Burkholderia_virus	3.3e-142	88.2
WP_047852444.1\|3158362_3158569_+	hypothetical protein	NA	NA	NA	NA
WP_047852445.1\|3159284_3159752_-	DUF2514 family protein	C7BGD9	Burkholderia_phage	1.2e-43	70.1
WP_047852446.1\|3159741_3160050_-\|holin	holin	C7BGD7	Burkholderia_phage	8.2e-12	40.9
WP_047852447.1\|3160060_3160441_-	M15 family metallopeptidase	S4TRL9	Salmonella_phage	9.1e-45	73.6
WP_053060295.1\|3160635_3161373_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_047852448.1\|3161382_3161814_-	hypothetical protein	R4JMH4	Burkholderia_phage	1.0e-44	62.7
WP_047852449.1\|3162799_3163366_-	DUF2313 domain-containing protein	NA	NA	NA	NA
WP_047852450.1\|3163389_3164436_-\|plate	baseplate J/gp47 family protein	B5TK75	Pseudomonas_phage	1.5e-84	48.4
WP_047852451.1\|3164407_3164836_-	hypothetical protein	B5TK74	Pseudomonas_phage	1.0e-23	47.0
WP_081421245.1\|3164832_3165411_-\|plate	phage baseplate assembly protein	B5TK73	Pseudomonas_phage	3.8e-34	52.2
WP_047852452.1\|3165407_3166523_-\|plate	baseplate protein	B5TK72	Pseudomonas_phage	3.1e-101	54.4
WP_047852453.1\|3166523_3167762_-	hypothetical protein	B5TK71	Pseudomonas_phage	5.7e-80	38.5
WP_047852454.1\|3167769_3169707_-\|tail	phage tail tape measure protein	U5P420	Shigella_phage	8.9e-112	50.7
WP_047852455.1\|3169840_3170137_-\|tail	phage tail assembly protein	B5TK69	Pseudomonas_phage	2.3e-19	50.0
WP_047852456.1\|3170127_3170475_-\|tail	phage tail protein	B5TK68	Pseudomonas_phage	4.1e-28	52.2
WP_047852457.1\|3170544_3172041_-\|tail	tail sheath protein	B5TK67	Pseudomonas_phage	8.9e-152	55.6
WP_047852458.1\|3172037_3172268_-	DUF2635 domain-containing protein	Q8HAC6	Salmonella_phage	7.2e-05	62.5
WP_047852459.1\|3172264_3172855_-	hypothetical protein	B5TK65	Pseudomonas_phage	5.9e-35	43.9
WP_047852460.1\|3172862_3173333_-	hypothetical protein	NA	NA	NA	NA
WP_047852461.1\|3173325_3173658_-\|head	phage head closure protein	Q8HAC9	Salmonella_phage	1.4e-17	45.7
WP_047852462.1\|3173657_3174152_-\|head,tail	phage gp6-like head-tail connector protein	NA	NA	NA	NA
WP_152034478.1\|3174148_3174469_-	hypothetical protein	NA	NA	NA	NA
WP_047852464.1\|3174485_3175760_-\|capsid	phage major capsid protein	A4JX01	Burkholderia_virus	1.5e-99	46.4
WP_160313566.1\|3175837_3176728_-	S49 family peptidase	F8QZT1	Wolbachia_phage	3.5e-47	41.3
WP_081421248.1\|3176769_3178020_-\|portal	phage portal protein	A4JWZ9	Burkholderia_virus	8.1e-66	38.6
WP_047852465.1\|3178023_3179691_-\|terminase	terminase large subunit	A0A0U4B0C7	Pseudomonas_phage	4.0e-129	44.2
WP_053060301.1\|3179687_3180176_-\|terminase	phage terminase small subunit P27 family	D0R0C9	Streptococcus_phage	8.7e-16	31.0
WP_047852466.1\|3180276_3180690_-	HNH endonuclease	C7BGG5	Burkholderia_phage	3.5e-34	59.0
WP_047852467.1\|3180823_3181231_-	hypothetical protein	C7BGG3	Burkholderia_phage	9.4e-32	53.3
WP_081421250.1\|3181243_3182218_-	helix-turn-helix domain-containing protein	C7BGG2	Burkholderia_phage	1.1e-65	43.3
WP_047852468.1\|3182220_3183582_-	replicative DNA helicase	C7BGG1	Burkholderia_phage	5.2e-143	57.5
WP_047852469.1\|3183580_3183928_+	hypothetical protein	NA	NA	NA	NA
WP_047852470.1\|3183967_3184489_-	hypothetical protein	C7BGG0	Burkholderia_phage	3.2e-48	62.1
WP_081421251.1\|3184876_3185176_-	hypothetical protein	K7PHA1	Enterobacteria_phage	3.1e-08	43.7
WP_152034479.1\|3185324_3185702_+	hypothetical protein	NA	NA	NA	NA
WP_160313567.1\|3186221_3186383_+	hypothetical protein	NA	NA	NA	NA
WP_047852473.1\|3186650_3186857_+	hypothetical protein	C7BGF3	Burkholderia_phage	3.4e-22	83.8
WP_081421252.1\|3187172_3187724_+	PRTRC system protein E	NA	NA	NA	NA
WP_063794581.1\|3187737_3188127_+	PRTRC system protein C	NA	NA	NA	NA
WP_047852475.1\|3188123_3188309_+	hypothetical protein	NA	NA	NA	NA
WP_047852476.1\|3188305_3189385_+	PRTRC system protein F	NA	NA	NA	NA
WP_047852477.1\|3189381_3190092_+	PRTRC system protein B	NA	NA	NA	NA
WP_152034480.1\|3190096_3190903_+	PRTRC system protein A	NA	NA	NA	NA
WP_047852717.1\|3190908_3191661_+	PRTRC system ThiF family protein	NA	NA	NA	NA
3191506:3191522	attL	NA	NA	NA	NA
WP_047852479.1\|3192844_3193150_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_047852480.1\|3193146_3194157_-\|integrase	site-specific integrase	A0A0A0YR56	Pseudomonas_phage	4.4e-70	50.9
WP_047852481.1\|3194515_3195733_+\|integrase	tyrosine-type recombinase/integrase	B7SYF8	Stenotrophomonas_phage	4.0e-86	44.1
WP_152034481.1\|3195812_3196418_+	hypothetical protein	NA	NA	NA	NA
WP_081421253.1\|3196934_3197192_+	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_047852719.1\|3197196_3197487_+	hypothetical protein	NA	NA	NA	NA
WP_047852484.1\|3197938_3198166_+	hypothetical protein	NA	NA	NA	NA
WP_047852485.1\|3198158_3198551_+	hypothetical protein	NA	NA	NA	NA
WP_162489650.1\|3198547_3198733_+	hypothetical protein	NA	NA	NA	NA
WP_152034482.1\|3198660_3200046_+	AAA family ATPase	NA	NA	NA	NA
WP_047852486.1\|3200042_3200474_+	hypothetical protein	NA	NA	NA	NA
WP_047852487.1\|3200460_3200718_+	hypothetical protein	NA	NA	NA	NA
WP_047852488.1\|3200976_3202137_+\|capsid	phage major capsid protein	K7XS73	uncultured_Mediterranean_phage	1.1e-08	26.1
WP_053060305.1\|3202605_3202980_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_081421256.1\|3202963_3203545_+	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA
WP_152034483.1\|3203861_3204185_+	hypothetical protein	NA	NA	NA	NA
WP_047852492.1\|3204849_3205185_-	hypothetical protein	NA	NA	NA	NA
WP_047852493.1\|3205714_3206047_+	hypothetical protein	NA	NA	NA	NA
WP_047852494.1\|3206101_3206842_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_047852495.1\|3206956_3207580_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_047852496.1\|3207616_3208117_-\|protease	serine protease inhibitor ecotin	NA	NA	NA	NA
3211954:3211970	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP009745

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1396586 : 1425163

Burkholderia_phage(28.57%)

integrase,transposase

attL 1392470:1392485|attR 1422941:1422956

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1392470:1392485	attL	NA	NA	NA	NA
WP_047853508.1\|1396586_1397516_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_047853745.1\|1397734_1398127_-	DUF2471 family protein	NA	NA	NA	NA
WP_047853509.1\|1398218_1398518_-	H-NS histone family protein	F8TUP5	EBPR_podovirus	2.6e-10	41.4
WP_152034520.1\|1399190_1399703_-	hypothetical protein	NA	NA	NA	NA
WP_047853511.1\|1399872_1403022_-	error-prone DNA polymerase	A0A1B1PA77	Streptomyces_phage	8.2e-91	27.9
WP_047853512.1\|1403028_1404507_-	DNA polymerase Y family protein	NA	NA	NA	NA
WP_047853513.1\|1404427_1405144_-	translesion DNA synthesis-associated protein ImuA	NA	NA	NA	NA
WP_047853514.1\|1405340_1406093_+	DUF159 family protein	C7BGE4	Burkholderia_phage	1.2e-35	39.6
WP_047853746.1\|1406230_1406557_-	H-NS histone family protein	NA	NA	NA	NA
WP_152034521.1\|1406944_1407238_+	hypothetical protein	NA	NA	NA	NA
WP_152034522.1\|1407299_1407485_+	hypothetical protein	NA	NA	NA	NA
WP_152034523.1\|1407822_1408299_+	hypothetical protein	NA	NA	NA	NA
WP_047853517.1\|1408740_1409037_+	H-NS histone family protein	NA	NA	NA	NA
WP_047853518.1\|1410122_1411754_+	hypothetical protein	NA	NA	NA	NA
WP_047853519.1\|1411798_1413361_-\|transposase	IS66 family transposase	S5VTD3	Leptospira_phage	2.2e-68	34.5
WP_047853520.1\|1413392_1413743_-	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	5.6e-17	39.4
WP_152034550.1\|1413718_1414249_-\|transposase	transposase	NA	NA	NA	NA
WP_047853522.1\|1417205_1418249_+	DUF1016 domain-containing protein	Q9JMP5	Wolbachia_phage	3.2e-108	53.8
WP_162489657.1\|1418956_1419094_-	hypothetical protein	NA	NA	NA	NA
WP_047853523.1\|1419135_1419669_-	gamma carbonic anhydrase family protein	NA	NA	NA	NA
WP_047853524.1\|1419684_1421295_-	hypothetical protein	NA	NA	NA	NA
WP_047853525.1\|1421732_1422725_-\|transposase	IS5 family transposase	E5E3P6	Burkholderia_phage	6.7e-156	84.5
WP_160313579.1\|1423141_1423564_-\|transposase	transposase	NA	NA	NA	NA
1422941:1422956	attR	NA	NA	NA	NA
WP_081421365.1\|1424149_1425163_+\|transposase	IS110 family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP009743

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP009744

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CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP009745

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection