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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP011939 Bacillus coagulans strain S-lac chromosome, complete genome 12 crisprs cas2,cas1,cas4,cas7,cas8c,cas5,cas3,RT,DinG,casR,DEDDh,csa3 0 12 14 0

Results visualization

1. NZ_CP011939
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011939_1 192663-192769 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011939_2 377226-380103 TypeI I-C
43 spacers
cas2,cas1,cas4,cas7,cas8c,cas5,cas3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011939_3 419774-419874 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011939_4 1065725-1065815 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011939_5 1209553-1209643 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011939_6 1450223-1450815 Orphan NA
11 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011939_7 1743995-1744086 Orphan NA
1 spacers
RT

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011939_8 1838053-1838133 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011939_9 1916620-1916711 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011939_10 2139269-2139361 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011939_11 2945633-2945720 Orphan NA
1 spacers
DEDDh

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011939_12 3554359-3554459 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP011939_12 12.1|3554382|55|NZ_CP011939|CRISPRCasFinder 3554382-3554436 55 NZ_LR134399 Listeria monocytogenes strain NCTC7974 plasmid 2, complete sequence 57355-57409 6 0.891
NZ_CP011939_2 2.6|377590|34|NZ_CP011939|CRT,PILER-CR,CRISPRCasFinder 377590-377623 34 NZ_CP028585 Escherichia coli strain WCHEC4533 plasmid p1_000533, complete sequence 2762-2795 7 0.794
NZ_CP011939_2 2.6|377590|34|NZ_CP011939|CRT,PILER-CR,CRISPRCasFinder 377590-377623 34 NZ_CP034790 Escherichia coli strain ECCNB20-2 plasmid pTB423, complete sequence 85325-85358 7 0.794
NZ_CP011939_2 2.6|377590|34|NZ_CP011939|CRT,PILER-CR,CRISPRCasFinder 377590-377623 34 LT906557 Escherichia coli isolate E. coli RL465 genome assembly, plasmid: II 37685-37718 7 0.794
NZ_CP011939_2 2.6|377590|34|NZ_CP011939|CRT,PILER-CR,CRISPRCasFinder 377590-377623 34 NZ_CP032875 Escherichia coli strain WCHEC000837 plasmid p1_000837, complete sequence 19713-19746 7 0.794
NZ_CP011939_2 2.6|377590|34|NZ_CP011939|CRT,PILER-CR,CRISPRCasFinder 377590-377623 34 NZ_CP022228 Escherichia coli strain WCHEC96200 plasmid p1_000200, complete sequence 60678-60711 7 0.794
NZ_CP011939_12 12.1|3554382|55|NZ_CP011939|CRISPRCasFinder 3554382-3554436 55 NZ_CP015440 Anoxybacillus amylolyticus strain DSM 15939 plasmid pDSM15939_2, complete sequence 64784-64838 7 0.873
NZ_CP011939_2 2.13|378053|34|NZ_CP011939|CRT,PILER-CR,CRISPRCasFinder 378053-378086 34 NC_019526 Enterobacteria phage vB_KleM-RaK2, complete genome 245611-245644 8 0.765
NZ_CP011939_2 2.13|378053|34|NZ_CP011939|CRT,PILER-CR,CRISPRCasFinder 378053-378086 34 MT708547 Klebsiella phage Muenster, complete genome 20967-21000 8 0.765
NZ_CP011939_2 2.13|378053|34|NZ_CP011939|CRT,PILER-CR,CRISPRCasFinder 378053-378086 34 NZ_CP010057 Hymenobacter sp. DG25B plasmid, complete sequence 93223-93256 8 0.765
NZ_CP011939_2 2.40|379842|34|NZ_CP011939|CRT,PILER-CR,CRISPRCasFinder 379842-379875 34 KM236247 Bacillus phage Pascal, complete genome 1370-1403 8 0.765
NZ_CP011939_12 12.1|3554382|55|NZ_CP011939|CRISPRCasFinder 3554382-3554436 55 NZ_CP015439 Anoxybacillus amylolyticus strain DSM 15939 plasmid pDSM15939_1, complete sequence 255881-255935 8 0.855
NZ_CP011939_2 2.27|378979|34|NZ_CP011939|CRT,PILER-CR,CRISPRCasFinder 378979-379012 34 NZ_AP017562 Pseudanabaena sp. ABRG5-3 plasmid ABRG53b, complete sequence 30985-31018 9 0.735
NZ_CP011939_2 2.38|379708|34|NZ_CP011939|CRT,PILER-CR,CRISPRCasFinder 379708-379741 34 NZ_CP010727 Phaeobacter inhibens strain P88 plasmid pP88_b, complete sequence 72779-72812 9 0.735
NZ_CP011939_2 2.42|379973|33|NZ_CP011939|CRT,PILER-CR,CRISPRCasFinder 379973-380005 33 NZ_CP039708 Lactobacillus paracasei strain Lp02 plasmid pLp02-1, complete sequence 52162-52194 9 0.727
NZ_CP011939_12 12.1|3554382|55|NZ_CP011939|CRISPRCasFinder 3554382-3554436 55 NZ_CP024037 Bacillus aryabhattai strain K13 plasmid unnamed2 10428-10482 9 0.836
NZ_CP011939_12 12.1|3554382|55|NZ_CP011939|CRISPRCasFinder 3554382-3554436 55 NZ_CP026740 Bacillus megaterium strain YC4-R4 plasmid unnamed4 70775-70829 9 0.836
NZ_CP011939_12 12.1|3554382|55|NZ_CP011939|CRISPRCasFinder 3554382-3554436 55 NZ_CP010587 Bacillus megaterium Q3 plasmid p1, complete sequence 832-886 9 0.836
NZ_CP011939_12 12.1|3554382|55|NZ_CP011939|CRISPRCasFinder 3554382-3554436 55 NZ_CP023319 Bacillus megaterium strain A plasmid p2, complete sequence 75819-75873 9 0.836
NZ_CP011939_12 12.1|3554382|55|NZ_CP011939|CRISPRCasFinder 3554382-3554436 55 NC_017139 Bacillus megaterium WSH-002 plasmid WSH-002_p1, complete sequence 1329-1383 9 0.836
NZ_CP011939_12 12.1|3554382|55|NZ_CP011939|CRISPRCasFinder 3554382-3554436 55 NC_020451 Vibrio coralliilyticus strain ATCC BAA-450 plasmid, complete sequence 1971-2025 9 0.836
NZ_CP011939_2 2.13|378053|34|NZ_CP011939|CRT,PILER-CR,CRISPRCasFinder 378053-378086 34 NZ_CP020349 Pasteurella multocida subsp. septica strain CIRMBP-0873 plasmid unnamed2, complete sequence 93-126 10 0.706
NZ_CP011939_2 2.26|378913|34|NZ_CP011939|CRT,PILER-CR,CRISPRCasFinder 378913-378946 34 MN234226 Mycobacterium phage Curiosium, complete genome 22482-22515 10 0.706
NZ_CP011939_2 2.29|379110|34|NZ_CP011939|CRT,PILER-CR,CRISPRCasFinder 379110-379143 34 NC_021289 Burkholderia insecticola plasmid p1, complete sequence 818211-818244 10 0.706
NZ_CP011939_12 12.1|3554382|55|NZ_CP011939|CRISPRCasFinder 3554382-3554436 55 NC_048753 Lactobacillus phage 3-521, complete genome 13549-13603 10 0.818
NZ_CP011939_2 2.13|378053|34|NZ_CP011939|CRT,PILER-CR,CRISPRCasFinder 378053-378086 34 NZ_CP018877 Bacillus megaterium strain JX285 plasmid 4, complete sequence 4012-4045 11 0.676
NZ_CP011939_2 2.30|379176|34|NZ_CP011939|CRT,PILER-CR,CRISPRCasFinder 379176-379209 34 NZ_CP034187 Deinococcus sp. S14-83 strain S14-83T plasmid unnamed3, complete sequence 140828-140861 11 0.676
NZ_CP011939_12 12.1|3554382|55|NZ_CP011939|CRISPRCasFinder 3554382-3554436 55 NZ_CP033045 Bacillus foraminis strain Bac44 plasmid unnamed, complete sequence 483785-483839 11 0.8
NZ_CP011939_2 2.13|378053|34|NZ_CP011939|CRT,PILER-CR,CRISPRCasFinder 378053-378086 34 CP041518 Bacillus aryabhattai strain KNU10 plasmid unnamed2, complete sequence 88586-88619 12 0.647
NZ_CP011939_2 2.13|378053|34|NZ_CP011939|CRT,PILER-CR,CRISPRCasFinder 378053-378086 34 NZ_CP041064 Bacillus megaterium strain KNU-01 plasmid pKNU_01_1, complete sequence 102067-102100 12 0.647
NZ_CP011939_2 2.13|378053|34|NZ_CP011939|CRT,PILER-CR,CRISPRCasFinder 378053-378086 34 NZ_CP018876 Bacillus megaterium strain JX285 plasmid 3, complete sequence 15377-15410 12 0.647
NZ_CP011939_2 2.23|378716|34|NZ_CP011939|CRT,PILER-CR,CRISPRCasFinder 378716-378749 34 NZ_CP039965 Pseudorhodobacter sp. S12M18 plasmid unnamed1, complete sequence 1548793-1548826 12 0.647
NZ_CP011939_2 2.39|379774|36|NZ_CP011939|CRT,PILER-CR,CRISPRCasFinder 379774-379809 36 MF351863 Synechococcus phage Bellamy, complete genome 93165-93200 12 0.667

1. spacer 12.1|3554382|55|NZ_CP011939|CRISPRCasFinder matches to NZ_LR134399 (Listeria monocytogenes strain NCTC7974 plasmid 2, complete sequence) position: , mismatch: 6, identity: 0.891

cgacaacagcttggaaggctgtggttttaccactaaactacacccgcagcaaagg	CRISPR spacer
cgacaacagcttggaaggctgtagttttaccactaaactacacccgcatagtaag	Protospacer
**********************.*************************  . *.*

2. spacer 2.6|377590|34|NZ_CP011939|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP028585 (Escherichia coli strain WCHEC4533 plasmid p1_000533, complete sequence) position: , mismatch: 7, identity: 0.794

taatgctggatagctgtatccaggtcctccggca	CRISPR spacer
tccttctggatagctttatccaggttctccatca	Protospacer
*  * ********** *********.****. **

3. spacer 2.6|377590|34|NZ_CP011939|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP034790 (Escherichia coli strain ECCNB20-2 plasmid pTB423, complete sequence) position: , mismatch: 7, identity: 0.794

taatgctggatagctgtatccaggtcctccggca	CRISPR spacer
tccttctggatagctttatccaggttctccatca	Protospacer
*  * ********** *********.****. **

4. spacer 2.6|377590|34|NZ_CP011939|CRT,PILER-CR,CRISPRCasFinder matches to LT906557 (Escherichia coli isolate E. coli RL465 genome assembly, plasmid: II) position: , mismatch: 7, identity: 0.794

taatgctggatagctgtatccaggtcctccggca	CRISPR spacer
tccttctggatagctttatccaggttctccatca	Protospacer
*  * ********** *********.****. **

5. spacer 2.6|377590|34|NZ_CP011939|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP032875 (Escherichia coli strain WCHEC000837 plasmid p1_000837, complete sequence) position: , mismatch: 7, identity: 0.794

taatgctggatagctgtatccaggtcctccggca	CRISPR spacer
tccttctggatagctttatccaggttctccatca	Protospacer
*  * ********** *********.****. **

6. spacer 2.6|377590|34|NZ_CP011939|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP022228 (Escherichia coli strain WCHEC96200 plasmid p1_000200, complete sequence) position: , mismatch: 7, identity: 0.794

taatgctggatagctgtatccaggtcctccggca	CRISPR spacer
tccttctggatagctttatccaggttctccatca	Protospacer
*  * ********** *********.****. **

7. spacer 12.1|3554382|55|NZ_CP011939|CRISPRCasFinder matches to NZ_CP015440 (Anoxybacillus amylolyticus strain DSM 15939 plasmid pDSM15939_2, complete sequence) position: , mismatch: 7, identity: 0.873

cgacaacagcttggaaggctgtggttttaccactaaactacacccgcagcaaagg	CRISPR spacer
cgacatcagcttggaaggctgaggttttaccactaaactacacccgcataataat	Protospacer
***** *************** **************************  * *. 

8. spacer 2.13|378053|34|NZ_CP011939|CRT,PILER-CR,CRISPRCasFinder matches to NC_019526 (Enterobacteria phage vB_KleM-RaK2, complete genome) position: , mismatch: 8, identity: 0.765

aacaacaaggaggaatgaaaaaatggcaaagaaa	CRISPR spacer
ctcattggtgaggaatcaaaaaatggcaaagaaa	Protospacer
  ** ... ******* *****************

9. spacer 2.13|378053|34|NZ_CP011939|CRT,PILER-CR,CRISPRCasFinder matches to MT708547 (Klebsiella phage Muenster, complete genome) position: , mismatch: 8, identity: 0.765

aacaacaaggaggaatgaaaaaatggcaaagaaa	CRISPR spacer
ctcattggtgaggaatcaaaaaatggcaaagaaa	Protospacer
  ** ... ******* *****************

10. spacer 2.13|378053|34|NZ_CP011939|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP010057 (Hymenobacter sp. DG25B plasmid, complete sequence) position: , mismatch: 8, identity: 0.765

aacaacaaggaggaatgaaaaaatggcaaagaaa	CRISPR spacer
atggcccaggaggaattaaaaaatggcaaggaca	Protospacer
*  . * ********* ************.** *

11. spacer 2.40|379842|34|NZ_CP011939|CRT,PILER-CR,CRISPRCasFinder matches to KM236247 (Bacillus phage Pascal, complete genome) position: , mismatch: 8, identity: 0.765

ccactcatcccatactttatccctgatcgtttgg	CRISPR spacer
ccattcatcccatattttatcccttcggctttcg	Protospacer
***.**********.*********     *** *

12. spacer 12.1|3554382|55|NZ_CP011939|CRISPRCasFinder matches to NZ_CP015439 (Anoxybacillus amylolyticus strain DSM 15939 plasmid pDSM15939_1, complete sequence) position: , mismatch: 8, identity: 0.855

cgacaacagcttggaaggctgtggttttaccactaaactacacccgcagcaaagg	CRISPR spacer
cgacatcagcttggaaggctgaggttttaccactaaactacacccgcatattata	Protospacer
***** *************** **************************    * .

13. spacer 2.27|378979|34|NZ_CP011939|CRT,PILER-CR,CRISPRCasFinder matches to NZ_AP017562 (Pseudanabaena sp. ABRG5-3 plasmid ABRG53b, complete sequence) position: , mismatch: 9, identity: 0.735

tataatcgatgccatcaaagccttgttctgcaac	CRISPR spacer
tgcctcctaagccaccaaagacttgttctgcaac	Protospacer
*..  .* * ****.***** *************

14. spacer 2.38|379708|34|NZ_CP011939|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP010727 (Phaeobacter inhibens strain P88 plasmid pP88_b, complete sequence) position: , mismatch: 9, identity: 0.735

agaacagaaaaagctgatcaaccagcagcgggaa	CRISPR spacer
ctggcaggtcaagctgatcaagcagcagcggcaa	Protospacer
  ..***.  *********** ********* **

15. spacer 2.42|379973|33|NZ_CP011939|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP039708 (Lactobacillus paracasei strain Lp02 plasmid pLp02-1, complete sequence) position: , mismatch: 9, identity: 0.727

accgcccatttgccaacgtgctttccgcttgat	CRISPR spacer
gcacatctcttgccaactagctttccgcttgat	Protospacer
.*   .* .********  **************

16. spacer 12.1|3554382|55|NZ_CP011939|CRISPRCasFinder matches to NZ_CP024037 (Bacillus aryabhattai strain K13 plasmid unnamed2) position: , mismatch: 9, identity: 0.836

cgacaacagcttggaaggctgtggttttaccactaaactacacccgcagcaaagg	CRISPR spacer
cgacatcagcttggaaggctgaggttttaccactaaactacacccgcatatttta	Protospacer
***** *************** **************************      .

17. spacer 12.1|3554382|55|NZ_CP011939|CRISPRCasFinder matches to NZ_CP026740 (Bacillus megaterium strain YC4-R4 plasmid unnamed4) position: , mismatch: 9, identity: 0.836

cgacaacagcttggaaggctgtggttttaccactaaactacacccgcagcaaagg	CRISPR spacer
cgacatcagcttggaaggctgaggttttaccactaaactacacccgcatatttta	Protospacer
***** *************** **************************      .

18. spacer 12.1|3554382|55|NZ_CP011939|CRISPRCasFinder matches to NZ_CP010587 (Bacillus megaterium Q3 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.836

cgacaacagcttggaaggctgtggttttaccactaaactacacccgcagcaaagg	CRISPR spacer
cgacatcagcttggaaggctgaggttttaccactaaactacacccgcatatttta	Protospacer
***** *************** **************************      .

19. spacer 12.1|3554382|55|NZ_CP011939|CRISPRCasFinder matches to NZ_CP023319 (Bacillus megaterium strain A plasmid p2, complete sequence) position: , mismatch: 9, identity: 0.836

cgacaacagcttggaaggctgtggttttaccactaaactacacccgcagcaaagg	CRISPR spacer
cgacatcagcttggaaggctgaggttttaccactaaactacacccgcatatttta	Protospacer
***** *************** **************************      .

20. spacer 12.1|3554382|55|NZ_CP011939|CRISPRCasFinder matches to NC_017139 (Bacillus megaterium WSH-002 plasmid WSH-002_p1, complete sequence) position: , mismatch: 9, identity: 0.836

cgacaacagcttggaaggctgtggttttaccactaaactacacccgcagcaaagg	CRISPR spacer
cgacatcagcttggaaggctgaggttttaccactaaactacacccgcatatttta	Protospacer
***** *************** **************************      .

21. spacer 12.1|3554382|55|NZ_CP011939|CRISPRCasFinder matches to NC_020451 (Vibrio coralliilyticus strain ATCC BAA-450 plasmid, complete sequence) position: , mismatch: 9, identity: 0.836

cgacaacagcttggaaggctgtggttttaccactaaactacacccgcagcaaagg	CRISPR spacer
catcatcagcttggaaggctgaggttttaccactaaactacacccgcattttagt	Protospacer
*. ** *************** ************************** .  ** 

22. spacer 2.13|378053|34|NZ_CP011939|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP020349 (Pasteurella multocida subsp. septica strain CIRMBP-0873 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.706

aacaacaaggaggaatgaaaaaatggcaaagaaa	CRISPR spacer
gtttaaaagaaggaaagaaaaaatggcaaaagga	Protospacer
. . * ***.***** **************...*

23. spacer 2.26|378913|34|NZ_CP011939|CRT,PILER-CR,CRISPRCasFinder matches to MN234226 (Mycobacterium phage Curiosium, complete genome) position: , mismatch: 10, identity: 0.706

caggatgcacaatccggtgcaaaattgatgacgg	CRISPR spacer
caaccgcggcaatccggtgcaacattggtgacgt	Protospacer
**.     .************* ****.***** 

24. spacer 2.29|379110|34|NZ_CP011939|CRT,PILER-CR,CRISPRCasFinder matches to NC_021289 (Burkholderia insecticola plasmid p1, complete sequence) position: , mismatch: 10, identity: 0.706

cgtcgctgtcgagttcgattccgtcgttaagttc	CRISPR spacer
cgtcgctgtcgagttcgatccagtcgccgtcgcg	Protospacer
*******************.* ****...   . 

25. spacer 12.1|3554382|55|NZ_CP011939|CRISPRCasFinder matches to NC_048753 (Lactobacillus phage 3-521, complete genome) position: , mismatch: 10, identity: 0.818

cgacaacagcttggaaggctgtggttttaccactaaactacacccgcagcaaagg	CRISPR spacer
catctacagcttggaaggctgtggttttaccactaaactatacccgcgtgaacta	Protospacer
*. * ***********************************.******.  **  .

26. spacer 2.13|378053|34|NZ_CP011939|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP018877 (Bacillus megaterium strain JX285 plasmid 4, complete sequence) position: , mismatch: 11, identity: 0.676

aacaacaaggaggaatgaaaaaatggcaaagaaa	CRISPR spacer
tggaacatagaggaatgaaaaaatggcgtccatt	Protospacer
 . **** .******************.   *  

27. spacer 2.30|379176|34|NZ_CP011939|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP034187 (Deinococcus sp. S14-83 strain S14-83T plasmid unnamed3, complete sequence) position: , mismatch: 11, identity: 0.676

actttttgactcggaattacaacgcattgtctac	CRISPR spacer
taggattgacaaggaattacaacgcattgcacgc	Protospacer
     *****  *****************. ..*

28. spacer 12.1|3554382|55|NZ_CP011939|CRISPRCasFinder matches to NZ_CP033045 (Bacillus foraminis strain Bac44 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.8

cgacaacagcttggaaggctgtggttttaccactaaactacacccgcagcaaagg	CRISPR spacer
catcatcagcttggaaggctgaggttttaccactaaactacacccgcatggttaa	Protospacer
*. ** *************** **************************  .  ..

29. spacer 2.13|378053|34|NZ_CP011939|CRT,PILER-CR,CRISPRCasFinder matches to CP041518 (Bacillus aryabhattai strain KNU10 plasmid unnamed2, complete sequence) position: , mismatch: 12, identity: 0.647

aacaacaaggaggaatgaaaaaatggcaaagaaa	CRISPR spacer
tggaacatagaggaatgaaaaaatggcgcccttt	Protospacer
 . **** .******************.      

30. spacer 2.13|378053|34|NZ_CP011939|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP041064 (Bacillus megaterium strain KNU-01 plasmid pKNU_01_1, complete sequence) position: , mismatch: 12, identity: 0.647

aacaacaaggaggaatgaaaaaatggcaaagaaa	CRISPR spacer
tggaacatagaggaatgaaaaaatggcgcccttt	Protospacer
 . **** .******************.      

31. spacer 2.13|378053|34|NZ_CP011939|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP018876 (Bacillus megaterium strain JX285 plasmid 3, complete sequence) position: , mismatch: 12, identity: 0.647

aacaacaaggaggaatgaaaaaatggcaaagaaa	CRISPR spacer
tggaacatagaggaatgaaaaaatggcgcccttt	Protospacer
 . **** .******************.      

32. spacer 2.23|378716|34|NZ_CP011939|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP039965 (Pseudorhodobacter sp. S12M18 plasmid unnamed1, complete sequence) position: , mismatch: 12, identity: 0.647

aatgcaggcggtagagacaggccagctgcgcata	CRISPR spacer
gggcgaggcggtagaggcaggccagccgctggcc	Protospacer
..   ***********.*********.**  .. 

33. spacer 2.39|379774|36|NZ_CP011939|CRT,PILER-CR,CRISPRCasFinder matches to MF351863 (Synechococcus phage Bellamy, complete genome) position: , mismatch: 12, identity: 0.667

agcagatacgatgacggttcattagttgaattagat	CRISPR spacer
gatgacctcgatgatggttcatttgttgaattagca	Protospacer
..... . ******.******** **********  

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 139154 : 212858 54 Planktothrix_phage(12.5%) transposase NA
DBSCAN-SWA_2 448927 : 521775 56 Staphylococcus_phage(16.67%) transposase NA
DBSCAN-SWA_3 597077 : 664431 59 Bacillus_virus(28.57%) transposase NA
DBSCAN-SWA_4 712327 : 720640 8 Synechococcus_phage(33.33%) NA NA
DBSCAN-SWA_5 965433 : 1040256 56 Planktothrix_phage(20.0%) holin,transposase,tRNA NA
DBSCAN-SWA_6 1073248 : 1081311 10 Staphylococcus_phage(66.67%) protease NA
DBSCAN-SWA_7 1285544 : 1347415 73 Bacillus_phage(17.14%) tail,terminase,integrase,transposase attL 1285411:1285459|attR 1323933:1323981
DBSCAN-SWA_8 1373508 : 1419402 34 Streptococcus_phage(42.86%) protease,transposase NA
DBSCAN-SWA_9 2029023 : 2104692 59 Planktothrix_phage(21.43%) holin,transposase NA
DBSCAN-SWA_10 2110229 : 2116411 7 Streptococcus_phage(33.33%) NA NA
DBSCAN-SWA_11 2224594 : 2278517 51 Paenibacillus_phage(15.38%) coat,integrase,transposase attL 2249412:2249431|attR 2283317:2283336
DBSCAN-SWA_12 2917459 : 2983934 77 Bacillus_phage(29.41%) holin,integrase,tRNA,tail,capsid,head,protease,portal,terminase attL 2919452:2919511|attR 2955260:2955358
DBSCAN-SWA_13 3276319 : 3335304 55 Moraxella_phage(25.0%) protease,coat,tRNA NA
DBSCAN-SWA_14 3345072 : 3385242 37 Staphylococcus_phage(28.57%) coat,transposase,tRNA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage