CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number
NZ_CP021217	Sinorhizobium meliloti RU11/001 plasmid pSymA, complete sequence	1 crisprs	RT,WYL,DEDDh	0	1	3
NZ_CP021218	Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence	3 crisprs	csa3,RT	0	3	2
NZ_CP021213	Sinorhizobium meliloti RU11/001 plasmid pSmeRU11a, complete sequence	0 crisprs	NA	0	0	0
NZ_CP021216	Sinorhizobium meliloti RU11/001 plasmid pSmeRU11d, complete sequence	0 crisprs	NA	0	0	10
NZ_CP021219	Sinorhizobium meliloti RU11/001 chromosome, complete genome	2 crisprs	csa3,cas3,WYL,DEDDh	1	0	10
NZ_CP021214	Sinorhizobium meliloti RU11/001 plasmid pSmeRU11b, complete sequence	0 crisprs	NA	0	0	7
NZ_CP021215	Sinorhizobium meliloti RU11/001 plasmid pSmeRU11c, complete sequence	0 crisprs	NA	0	0	1

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP021217_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP021217_1

819879-819988

Orphan

Consensus_repeat	Method
GCCGCGCGGCGGGACCGCCGCGATGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP021217_1

>merge|NZ_CP021217|1|819879-819988|CRISPRCasFinder
GCCGCGCGGCGGGACCGCCGCGATGACCTGATGGAACTGATCGGCGACCGCGGCGACCGGCGCGAGCGGCTCATGGACCTGATCGCCGCGCGGCGGGACCGCCGGGATGA

>NZ_CP021217|1|1|819879-819988|CRISPRCasFinder
GCCGCGCGGCGGGACCGCCGCGATGA	CCTGATGGAACTGATCGGCGACCGCGGCGACCGGCGCGAGCGGCTCATGGACCTGATC
GCCGCGCGGCGGGACCGCCGGGATGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP021217.1\|WP_017266315.1\|822624_823341_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021217.1\|WP_017266317.1\|825229_826147_-\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293840
NZ_CP021217.1\|WP_014528417.1\|807082_807535_-\|DUF2721-domain-containing-protein	unknown	unknown	gnl\|CDD\|378544
NZ_CP021217.1\|WP_014531844.1\|805972_806320_-\|IS66-family-insertion-sequence-element-accessory-protein-TnpB	unknown	unknown	gnl\|CDD\|377551
NZ_CP021217.1\|WP_017266976.1\|804000_804237_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021217.1\|WP_017266318.1\|826267_827092_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_CP021217.1\|WP_014528402.1\|829650_830286_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|226932
NZ_CP021217.1\|WP_017265939.1\|815771_816128_-\|BA14K-family-protein	unknown	unknown	gnl\|CDD\|369573
NZ_CP021217.1\|WP_017265940.1\|813425_815510_+\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|306677
NZ_CP021217.1\|WP_014531845.1\|806316_806712_-\|IS66-family-insertion-sequence-hypothetical-protein	unknown	unknown	gnl\|CDD\|366690
NZ_CP021217.1\|WP_014531860.1\|817243_819004_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227903
NZ_CP021217.1\|WP_014531840.1\|802072_802420_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021217.1\|WP_017272053.1\|810370_810724_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021217.1\|WP_017266314.1\|820758_820908_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|288799
NZ_CP021217.1\|WP_017272441.1\|827597_829646_+\|PAS-domain-containing-sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|226654
NZ_CP021217.1\|WP_017266316.1\|823390_824581_+\|PLP-dependent-transferase	unknown	unknown	gnl\|CDD\|223699
NZ_CP021217.1\|WP_014989884.1\|824858_825200_-\|carboxymuconolactone-decarboxylase-family-protein	unknown	unknown	gnl\|CDD\|223672
NZ_CP021217.1\|WP_014528410.1\|820370_820718_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021217.1\|WP_127616478.1\|809524_810049_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021217.1\|WP_014528409.1\|821386_822376_-\|zinc-dependent-alcohol-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|176233

Protein	Function_ID	Function_description	E-value
NZ_CP021217.1\|WP_017266317.1\|825229_826147_-\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293840	cd16282, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain. Members of the MBL-fold metallohydrolase superfamily are mainly hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) for which this fold was named perform only a small fraction of the activities included in this superfamily.Activities carried out by superfamily members include class B beta-lactamases, hydroxyacylglutathione hydrolases, AHL (acyl homoserine lactone) lactonases, persulfide dioxygenases, flavodiiron proteins, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J and ribonuclease Z, cyclic nucleotide phosphodiesterases, insecticide hydrolases, and proteins required for natural transformation competence. Classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, however the diversity of biological roles is reflected in variations in the active site metallo-chemistry.	1.41745e-49
NZ_CP021217.1\|WP_014528417.1\|807082_807535_-\|DUF2721-domain-containing-protein	gnl\|CDD\|378544	pfam11026, DUF2721, Protein of unknown function (DUF2721). This family is conserved in bacteria. The function is not known.	1.39673e-15
NZ_CP021217.1\|WP_014531844.1\|805972_806320_-\|IS66-family-insertion-sequence-element-accessory-protein-TnpB	gnl\|CDD\|377551	pfam05717, TnpB_IS66, IS66 Orf2 like protein. This protein is found in insertion sequences related to IS66. The function of these proteins is uncertain, but they are probably essential for transposition.	2.20827e-53
NZ_CP021217.1\|WP_014528402.1\|829650_830286_+\|response-regulator-transcription-factor	gnl\|CDD\|226932	COG4566, TtrR, Response regulator [Signal transduction mechanisms].	1.33135e-85
NZ_CP021217.1\|WP_017265939.1\|815771_816128_-\|BA14K-family-protein	gnl\|CDD\|369573	pfam07886, BA14K, BA14K-like protein. The sequences found in this family are similar to the BA14K proteins expressed by Brucella abortus and by Brucella suis. BA14K was found to be strongly immunoreactive; it induces both humoral and cellular responses in hosts throughout the infective process.	1.70794e-08
NZ_CP021217.1\|WP_014531845.1\|806316_806712_-\|IS66-family-insertion-sequence-hypothetical-protein	gnl\|CDD\|366690	pfam01527, HTH_Tnp_1, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family consists of various E. coli insertion elements and other bacterial transposases some of which are members of the IS3 family.	6.62424e-12
NZ_CP021217.1\|WP_014531860.1\|817243_819004_+\|hypothetical-protein	gnl\|CDD\|227903	COG5616, COG5616, Predicted integral membrane protein [Function unknown].	3.69409e-31
NZ_CP021217.1\|WP_017265940.1\|813425_815510_+\|HAMP-domain-containing-protein	gnl\|CDD\|306677	pfam00211, Guanylate_cyc, Adenylate and Guanylate cyclase catalytic domain.	2.48222e-72
NZ_CP021217.1\|WP_017266314.1\|820758_820908_-\|hypothetical-protein	gnl\|CDD\|288799	pfam11972, HTH_13, HTH DNA binding domain. This is a helix-turn-helix DNA binding domain.	2.84173e-06
NZ_CP021217.1\|WP_017272441.1\|827597_829646_+\|PAS-domain-containing-sensor-histidine-kinase	gnl\|CDD\|226654	COG4191, COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal transduction mechanisms].	6.00989e-36
NZ_CP021217.1\|WP_017266316.1\|823390_824581_+\|PLP-dependent-transferase	gnl\|CDD\|223699	COG0626, MetC, Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism].	6.6788e-128
NZ_CP021217.1\|WP_014989884.1\|824858_825200_-\|carboxymuconolactone-decarboxylase-family-protein	gnl\|CDD\|223672	COG0599, COG0599, Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit [Function unknown].	8.28336e-16
NZ_CP021217.1\|WP_017266318.1\|826267_827092_-\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	3.70021e-43
NZ_CP021217.1\|WP_014528409.1\|821386_822376_-\|zinc-dependent-alcohol-dehydrogenase-family-protein	gnl\|CDD\|176233	cd08272, MDR6, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	1.59654e-173

>NZ_CP021217.1|WP_014531860.1|817243_819004_+|hypothetical-protein
MVHADQQGVPVDPATALPTEAEVLAQLDRIRFSTEFDAPERARQFLAYVVGETIAGRADRIKAYSIATEVFGRDSSFDAQTDPAVRIEAARIRRALERYYLVEGHNDPLIINMPKGAYVPTFERRIKVHTEPDPGLFVSVRRNSPFGSSRQPWAWVAIAALAFALGSLAANALLRSITPAESEDMAGFRPNIPKLAVMPFEDLTGTPHSAMITRGFTDEVVDKIARFKEIIVVSREKLDGSPDQADAPAYALEGRVRLDGEKLRLAIRLVQRSDGSVVWANNYDESLATHKIIALQEKAAAAVATAVAQPYGVVFQANAVRFTRSVPDDWEAYACTLAYYGYRSNLSPLTHSSVQECLQQATRQFPNYATAWALLSMTYIDELRFQYRLERSSPISLEHAVAAAARAVELDSQDVRALQAEMLTLFFRGEVDAALAVGARAFAINPNDTELAGEYGFRRALSGQWRSGCELVSQTVERNPGPVGYFEAALAICSYIESDYVAAERWARLADLRANPIYRVILLAILGKLGKEEQAKEEQNWLETNVPGFLENIRKEIALRIRRPEDQQHFIEGLREAGVTIPEGGA
>NZ_CP021217.1|WP_017265939.1|815771_816128_-|BA14K-family-protein
MSPARAQTCIGICNGGTGGSTNHNLFIEREYRDFLQQRYPNYGSRYRGMRPDISIGPGATVGGPRPGVRQQFRLRQRRVIDANKHLRWCQERYLSYRLADDTFQPFEGARRPCNSPYN
>NZ_CP021217.1|WP_017265940.1|813425_815510_+|HAMP-domain-containing-protein
MAVKLFTILVLLGAIAVLVTGVLGYFRARDALEKAVFDQLTAARQTKTRQVEDYFRTIDAELRLLASSKMAVDATREFRIVVDQLDRAGAPPELRQKVGTWYTENFIPGITRVLGRKPVLADYLPVGAAPYYLQYHYIVANPHPAERRKLLDDAGDGSEYSRLHAMYHPMMRAAAATLGFFDFMIADPKSGRLIYTVEKEVDFTTSLQAGPYRHSNAAAAAARCAASPDRSAVCLEDFAPYAPSGGAPIAFMGAPVIDRGVVIGVLIAQLSNEEIDNVVTGGRRWRQEGFGDTGEAYLVGPDYLVRSGPRAFYENRENYFAELKSVGAPGEEIAAIERYGTPVQHQRINTKATQAALAGVEGTGEIVGYRGVPTLASWGPLAIPGIKWGLVAKIDSAEAFAPIERLRQDLLVVGGLALLVVAATGAWLSRALLGPLRELTAGVRRFAAGDYRASVPVRTHDEIGQLCSAFNGMVEDLHQKNVVIENKNRENEQLLLNVLPAPIANRLRGGEEAIADGFAEVTVAFADLVGFTELTSEMPPHDVVTLLNELFTRFDSAAHDLGIEKIKTVGDAYMAVCGLPEPVANHAERMVRMAIRMVHITREHGMEHNASMKLRVGINTGPVVAGVIGTSKYIYDLWGDTVNLASRMESGGIPDSIQVTRSVYEKLKGQFAFEPRGAIEVKGKGKVEAWVLRL
>NZ_CP021217.1|WP_017272053.1|810370_810724_+|hypothetical-protein
MLMKRPAFSTAVSLSLLALVSSRVNLSHAAEPTFAILQGMCRNTKDPLQQGYCTGFIEAIAIRIARDGKNCAFLQDYIDHANADLALSDLIADLNPAEYSEKAFDAVEKFFYNKGCS
>NZ_CP021217.1|WP_127616478.1|809524_810049_+|hypothetical-protein
MNATSPLYFETFLAECWKNGNRIGRHLLYDIKNRGYTGSRTNLERLLKVWREAKNIQPGEPPPDMDVSEPVRDPDTGHMISSVVAAALCIKPRGMLTDRQARKVNALKQGSTVFAIMRGLAMRFKGVLGSRNSEALAKWIDDAIETELTATCVSPAFCAGILMPSKMQSNSLGG
>NZ_CP021217.1|WP_014528417.1|807082_807535_-|DUF2721-domain-containing-protein
MNTPPIVTDLASVVQTSLAPVFLLAGTAGFVSIYTIRLGRVSDRLNEVADKGNQGKLFRMQLAYLRRRALALEVAVVLGVIAGICTGGAILNLLAGALAIGLRQENLFWFFGGAIVSLIGSLVAFLFELLIAGRNMLRQIRMDQIPTGQD
>NZ_CP021217.1|WP_014531845.1|806316_806712_-|IS66-family-insertion-sequence-hypothetical-protein
MTKHQIEVITSVERRRRWSREEKERLVAATLEPGASVSEIAHSAGIHVSQLFRWRKELCQISTPSVPQLIPVEVVETLPGPSIPPEPPPVSRPRKKASLVMIELGGGRRLRVGSDIDTEALARILDVLERR
>NZ_CP021217.1|WP_014531844.1|805972_806320_-|IS66-family-insertion-sequence-element-accessory-protein-TnpB
MIPVPSGVRVWLATGYTDMRRGFPGLSLMVQETLKRDPMSGHLFVFRGRSGGLIKVIWHDGQGACLFTKKLERGRFIWPSAADGTVVITPAQLGYLLEGIDWRMPQKTWRPSSAG
>NZ_CP021217.1|WP_017266976.1|804000_804237_-|hypothetical-protein
MLRDWDPIGISDIPEAKDEYDAYADVVFGMLINENATAEDIANYLFKIATEHMALPDREMAKLSETAAAAIVALRSNR
>NZ_CP021217.1|WP_014531840.1|802072_802420_+|hypothetical-protein
MIIYVAEISGRGIAAFDAANDIEAQAQLANRGLLRDLIVLQNEGRALWDGVAEIHVRMATPEETEIWQTSRAAVQSGEDSDDEGRHVFLVPVVDPSHDNFDDDDNPHHDDDRDGD
>NZ_CP021217.1|WP_014528410.1|820370_820718_+|hypothetical-protein
MNKFLLMTAGLLLMPLPALSQSAPDSGSRDPGSMQDREIEDLLRSITDEVSGGSGGPRRGAAFLLRSGDATVAVRCDPRESMKDCVDLTTSLLEKARSAMPTGGGAPGTAPPPRP
>NZ_CP021217.1|WP_017266314.1|820758_820908_-|hypothetical-protein
MVAKTLDVTPQAARRIVLELGLREIALVTVDDAASQVLRIVNTLQECFR
>NZ_CP021217.1|WP_014528409.1|821386_822376_-|zinc-dependent-alcohol-dehydrogenase-family-protein
MPTMRAAVVEAANGPFRVSDLEHPVPKSGEVLVRIKASGVNPLDTKIRAGAAAHARHQLPAVLGLDLAGIVEDVGGGVTRFSPGDEVYGMTGGVGGHQGSLAQYAAVDERLLAIRPSNLSMREAAALPLIFITAWEGLVDRVNARAGQTVLVLGAGGGVGHIAVQIAIALGADVYGVDSTSKGDYLRSLGATAIDYSSEEVESYVARHSGSKGFDVVYDTVGGAGLDTAFKAVARFGHVVSCLGWGTHALAPLSFKSATYSGVFTLIPLLTGEGREHHGDIMREATKLVEAGKVSPRLDPRTFTLETAANAHELIEHRKANGKLVIDVD
>NZ_CP021217.1|WP_017266315.1|822624_823341_+|hypothetical-protein
MNKLLDKVMVAHGSPSRWNDHQVVRAAALIAGDLCGNGVSGTTRQITVYPHLARALVEPSGSLSCRSDLVANRLSIIREDGTVISEIEDVRTMPMNYDPKARTDKVFGAFLACCTVRTLLTTPFLLAMKGVEVNELVPWNEDGDRWRVLRAEFPPGFDTAARVHDFFFGGDFLLRRHDYHVDGDTGITITELVSDYVDNHGIRMPSKLRGYRRCSDLNPDLARVLISIDISTLEFSAT
>NZ_CP021217.1|WP_017266316.1|823390_824581_+|PLP-dependent-transferase
MKDLTRCVVTPKVDTEGFVALGAGVYRASTIMFENAEAYANRGKRGPDGYSYGLYGTPTTRTLEAKLTVLEQGVRTFLLPSGQAANAIAMLPFLRAGDGVLLADSVYPPVRDFANTDLARFGVEVGYYDPADPSDLEARLNDRTKIVWCESPGSTTMEVQDLPRIADIAHRYGALLGCDNTWATPLNYKPLSLGADIVTEGLTKYISGHSDVLLGSLTVRDEQLTAPIRSTLGRLGICVSPDDASLVLRGLETLGVRMRHASEGALQLISRIQAADIVDRVLHPALPTSPGHSIWKRDFLGSSGVFGIVFKEGLSRHVAPSLDVLKTFAIGASWGGTRSLIAPMPVKAYRSVTQWDGDDLILRLSVGLEDHQDLVEDVDALLKEISARRSAWTIPR
>NZ_CP021217.1|WP_014989884.1|824858_825200_-|carboxymuconolactone-decarboxylase-family-protein
MSMIDWNSYHDQVLAGVGELASLNPDVIRGYQAIGGAARKSNLLGSKVNELIALAAAVSLRCDGCIVVHTDAALKAGATREEIAEALGTAIGVNAGAGLVYSTRVMDAVKSKS
>NZ_CP021217.1|WP_017266317.1|825229_826147_-|MBL-fold-metallo-hydrolase
MAASTFAVSGGWLSPRQAFAKAQGIVDMIRDEAAKAPIKVHEVRAGVAILEGSGGNIAVLTGEDGKLLVDGGITASRLRILDALAGLGKQPVMHLINTHWHFDHTDGNEWLNAEGAVILAHENTKKRLMTIQRVDDWDFEFPRPPLAAVPSETVGDETSLKLNKSTLMLKHHPNAHTDGDISVTFREANIVHTGDLYWNGIYPFIDYSTGGGIDGKIRAVEEILSRVTDETIVIPGHGQPLSKKSELSDYRKMLVDIRGNVARLKAEGKPIDEVIAAKPTEQFDAKWGQFVIGPEFFTRLVYHGV
>NZ_CP021217.1|WP_017266318.1|826267_827092_-|alpha/beta-hydrolase
MGTITTRDGTQIFYKDWGKGQPVVFHHGWPLSADDWDNQMLFFLGKGYRVIAHDRRGHGRSTQTDTGNDMDTYAADVAELAEALDLRDAIHVGHSTGGGEVTRYVAQHGKGRVAKAVIISAIPPVMLKSDSNPGGLPIEVFDDLRAQLAANRAQFYLDVPTGPFYGFNREDAKVSPGLIQNWWRQGMIGGAIAHYECIKVFSETDFTQDLKKIDVPVLVMHGDDDQIVPIADAALLSIKLLKHGTLKVYKGLPHGMCSTHPDIINPDLLAFFQA
>NZ_CP021217.1|WP_017272441.1|827597_829646_+|PAS-domain-containing-sensor-histidine-kinase
MLIKRRHLAVAAALLLIAVCALIVFVQASGSAGLTRPAAFLLSALAIVWLADLWRRRIDTDEHLNNAKLIVESMPGLGWATDAMGKFVYVNPSVVEYVGKRTDEFNETGRTGLEAVHPDDAERVTEAWLTSMRTGTSFQSIHRIRRADGEYRWFQAYGRPHFDAQGDILGWFGTTIDVDEKKRAEQRLAESERQLRTLIDTMPVMIWCGSPSGEPIYQNPKTLEYLGATFEEIKENNFGVVHPDDAEGFQSAWADCVERKASLSLICRLRYKDGTHRWNRIDAAPLLGEDGEIIEWYGTNVDIEELHQTQEELRSNAERLKLMLDTLPAFVWCASPEGQPTYFNEPLMKYSGVTLEELRGVDGSGFAPMISNLVHPADAPFLRDRFEQSFKSGEPIALKYRHRLADGNYHLVDCRARVLRDRQSRLFQWYGVIVDVEDEAQAQAQLQKAQHQLELATRAASLSELSASIAHELNQPLVAVTTNSSATAQWLSATPPNIDRARSSAKKAADAASDAAEVISRIKALFRQSGGAKYPGDINEVILEACTLLRERIAGSKCDLRTHLEPNLPNATFDKGLILQVVVNLVQNAMDAMATLNGAVRLLEIRSRFENGKILVDVRDSGVGLQDAEKIFEPFYTTKHNGMGIGLSICRSIVGAHAGTLWASPSEPSGTVFTFALPLSGG
>NZ_CP021217.1|WP_014528402.1|829650_830286_+|response-regulator-transcription-factor
MSHGDHAVFVIDDDKRVRDGLSELLESRGIGVTTFASAREYLKAPKPENPSCLVLDVRLPDIDGFELQARLANEPHPPIVFITGHGDIPMTVRAMKLGAVDFLAKPFRDHELLAAIQTALERDREARRDRSVLNELQGRLNRLSARERDVLPLVVSGLMNKQGAAELGISEITFQIHRGNLMRKMHADSLADLVRIATKLGIPITHSRHGN

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP021217_1	1.1\|819905\|58\|NZ_CP021217\|CRISPRCasFinder	819905-819962	58	NC_017324	Sinorhizobium meliloti BL225C plasmid pSINMEB01, complete sequence	709941-709998	0	1.0
NZ_CP021217_1	1.1\|819905\|58\|NZ_CP021217\|CRISPRCasFinder	819905-819962	58	NC_018683	Sinorhizobium meliloti Rm41 plasmid pSYMA, complete sequence	618048-618105	0	1.0
NZ_CP021217_1	1.1\|819905\|58\|NZ_CP021217\|CRISPRCasFinder	819905-819962	58	NZ_CP026526	Sinorhizobium meliloti strain AK21 plasmid pSymA, complete sequence	534472-534529	0	1.0
NZ_CP021217_1	1.1\|819905\|58\|NZ_CP021217\|CRISPRCasFinder	819905-819962	58	NZ_CP019483	Sinorhizobium meliloti strain B401 plasmid pSymA, complete sequence	320258-320315	0	1.0
NZ_CP021217_1	1.1\|819905\|58\|NZ_CP021217\|CRISPRCasFinder	819905-819962	58	NZ_CP019486	Sinorhizobium meliloti strain B399 plasmid pSymA, complete sequence	295298-295355	0	1.0
NZ_CP021217_1	1.1\|819905\|58\|NZ_CP021217\|CRISPRCasFinder	819905-819962	58	NZ_CP009145	Sinorhizobium meliloti strain RMO17 plasmid pSymA, complete sequence	1180665-1180722	0	1.0
NZ_CP021217_1	1.1\|819905\|58\|NZ_CP021217\|CRISPRCasFinder	819905-819962	58	NZ_CP021801	Sinorhizobium meliloti strain USDA1021 plasmid psymA, complete sequence	1086301-1086358	0	1.0
NZ_CP021217_1	1.1\|819905\|58\|NZ_CP021217\|CRISPRCasFinder	819905-819962	58	NZ_CP021824	Sinorhizobium meliloti strain KH46 plasmid psymA, complete sequence	1186250-1186307	0	1.0
NZ_CP021217_1	1.1\|819905\|58\|NZ_CP021217\|CRISPRCasFinder	819905-819962	58	NZ_CP021794	Sinorhizobium meliloti strain USDA1157 plasmid psymA, complete sequence	275823-275880	0	1.0
NZ_CP021217_1	1.1\|819905\|58\|NZ_CP021217\|CRISPRCasFinder	819905-819962	58	NZ_CP021809	Sinorhizobium meliloti strain Rm41 plasmid psymA, complete sequence	7342-7399	0	1.0
NZ_CP021217_1	1.1\|819905\|58\|NZ_CP021217\|CRISPRCasFinder	819905-819962	58	NZ_CP021217	Sinorhizobium meliloti RU11/001 plasmid pSymA, complete sequence	819905-819962	0	1.0
NZ_CP021217_1	1.1\|819905\|58\|NZ_CP021217\|CRISPRCasFinder	819905-819962	58	NC_003037	Sinorhizobium meliloti 1021 plasmid pSymA, complete sequence	347456-347513	1	0.983
NZ_CP021217_1	1.1\|819905\|58\|NZ_CP021217\|CRISPRCasFinder	819905-819962	58	NZ_CP019585	Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymA, complete sequence	403311-403368	1	0.983
NZ_CP021217_1	1.1\|819905\|58\|NZ_CP021217\|CRISPRCasFinder	819905-819962	58	NC_020527	Sinorhizobium meliloti 2011 plasmid pSymA, complete sequence	347117-347174	1	0.983
NZ_CP021217_1	1.1\|819905\|58\|NZ_CP021217\|CRISPRCasFinder	819905-819962	58	NZ_CP021798	Sinorhizobium meliloti strain USDA1106 plasmid psymA, complete sequence	373772-373829	1	0.983

1. spacer 1.1|819905|58|NZ_CP021217|CRISPRCasFinder matches to NC_017324 (Sinorhizobium meliloti BL225C plasmid pSINMEB01, complete sequence) position: , mismatch: 0, identity: 1.0

cctgatggaactgatcggcgaccgcggcgaccggcgcgagcggctcatggacctgatc	CRISPR spacer
cctgatggaactgatcggcgaccgcggcgaccggcgcgagcggctcatggacctgatc	Protospacer
**********************************************************

2. spacer 1.1|819905|58|NZ_CP021217|CRISPRCasFinder matches to NC_018683 (Sinorhizobium meliloti Rm41 plasmid pSYMA, complete sequence) position: , mismatch: 0, identity: 1.0

cctgatggaactgatcggcgaccgcggcgaccggcgcgagcggctcatggacctgatc	CRISPR spacer
cctgatggaactgatcggcgaccgcggcgaccggcgcgagcggctcatggacctgatc	Protospacer
**********************************************************

3. spacer 1.1|819905|58|NZ_CP021217|CRISPRCasFinder matches to NZ_CP026526 (Sinorhizobium meliloti strain AK21 plasmid pSymA, complete sequence) position: , mismatch: 0, identity: 1.0

cctgatggaactgatcggcgaccgcggcgaccggcgcgagcggctcatggacctgatc	CRISPR spacer
cctgatggaactgatcggcgaccgcggcgaccggcgcgagcggctcatggacctgatc	Protospacer
**********************************************************

4. spacer 1.1|819905|58|NZ_CP021217|CRISPRCasFinder matches to NZ_CP019483 (Sinorhizobium meliloti strain B401 plasmid pSymA, complete sequence) position: , mismatch: 0, identity: 1.0

cctgatggaactgatcggcgaccgcggcgaccggcgcgagcggctcatggacctgatc	CRISPR spacer
cctgatggaactgatcggcgaccgcggcgaccggcgcgagcggctcatggacctgatc	Protospacer
**********************************************************

5. spacer 1.1|819905|58|NZ_CP021217|CRISPRCasFinder matches to NZ_CP019486 (Sinorhizobium meliloti strain B399 plasmid pSymA, complete sequence) position: , mismatch: 0, identity: 1.0

cctgatggaactgatcggcgaccgcggcgaccggcgcgagcggctcatggacctgatc	CRISPR spacer
cctgatggaactgatcggcgaccgcggcgaccggcgcgagcggctcatggacctgatc	Protospacer
**********************************************************

6. spacer 1.1|819905|58|NZ_CP021217|CRISPRCasFinder matches to NZ_CP009145 (Sinorhizobium meliloti strain RMO17 plasmid pSymA, complete sequence) position: , mismatch: 0, identity: 1.0

cctgatggaactgatcggcgaccgcggcgaccggcgcgagcggctcatggacctgatc	CRISPR spacer
cctgatggaactgatcggcgaccgcggcgaccggcgcgagcggctcatggacctgatc	Protospacer
**********************************************************

7. spacer 1.1|819905|58|NZ_CP021217|CRISPRCasFinder matches to NZ_CP021801 (Sinorhizobium meliloti strain USDA1021 plasmid psymA, complete sequence) position: , mismatch: 0, identity: 1.0

cctgatggaactgatcggcgaccgcggcgaccggcgcgagcggctcatggacctgatc	CRISPR spacer
cctgatggaactgatcggcgaccgcggcgaccggcgcgagcggctcatggacctgatc	Protospacer
**********************************************************

8. spacer 1.1|819905|58|NZ_CP021217|CRISPRCasFinder matches to NZ_CP021824 (Sinorhizobium meliloti strain KH46 plasmid psymA, complete sequence) position: , mismatch: 0, identity: 1.0

cctgatggaactgatcggcgaccgcggcgaccggcgcgagcggctcatggacctgatc	CRISPR spacer
cctgatggaactgatcggcgaccgcggcgaccggcgcgagcggctcatggacctgatc	Protospacer
**********************************************************

9. spacer 1.1|819905|58|NZ_CP021217|CRISPRCasFinder matches to NZ_CP021794 (Sinorhizobium meliloti strain USDA1157 plasmid psymA, complete sequence) position: , mismatch: 0, identity: 1.0

cctgatggaactgatcggcgaccgcggcgaccggcgcgagcggctcatggacctgatc	CRISPR spacer
cctgatggaactgatcggcgaccgcggcgaccggcgcgagcggctcatggacctgatc	Protospacer
**********************************************************

10. spacer 1.1|819905|58|NZ_CP021217|CRISPRCasFinder matches to NZ_CP021809 (Sinorhizobium meliloti strain Rm41 plasmid psymA, complete sequence) position: , mismatch: 0, identity: 1.0

cctgatggaactgatcggcgaccgcggcgaccggcgcgagcggctcatggacctgatc	CRISPR spacer
cctgatggaactgatcggcgaccgcggcgaccggcgcgagcggctcatggacctgatc	Protospacer
**********************************************************

11. spacer 1.1|819905|58|NZ_CP021217|CRISPRCasFinder matches to NZ_CP021217 (Sinorhizobium meliloti RU11/001 plasmid pSymA, complete sequence) position: , mismatch: 0, identity: 1.0

cctgatggaactgatcggcgaccgcggcgaccggcgcgagcggctcatggacctgatc	CRISPR spacer
cctgatggaactgatcggcgaccgcggcgaccggcgcgagcggctcatggacctgatc	Protospacer
**********************************************************

12. spacer 1.1|819905|58|NZ_CP021217|CRISPRCasFinder matches to NC_003037 (Sinorhizobium meliloti 1021 plasmid pSymA, complete sequence) position: , mismatch: 1, identity: 0.983

cctgatggaactgatcggcgaccgcggcgaccggcgcgagcggctcatggacctgatc	CRISPR spacer
cctgatggaactgatcggcgaccgcggcgaccggcgcgaacggctcatggacctgatc	Protospacer
***************************************.******************

13. spacer 1.1|819905|58|NZ_CP021217|CRISPRCasFinder matches to NZ_CP019585 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymA, complete sequence) position: , mismatch: 1, identity: 0.983

cctgatggaactgatcggcgaccgcggcgaccggcgcgagcggctcatggacctgatc	CRISPR spacer
cctgatggaactgatcggcgaccgcggtgaccggcgcgagcggctcatggacctgatc	Protospacer
***************************.******************************

14. spacer 1.1|819905|58|NZ_CP021217|CRISPRCasFinder matches to NC_020527 (Sinorhizobium meliloti 2011 plasmid pSymA, complete sequence) position: , mismatch: 1, identity: 0.983

cctgatggaactgatcggcgaccgcggcgaccggcgcgagcggctcatggacctgatc	CRISPR spacer
cctgatggaactgatcggcgaccgcggcgaccggcgcgaacggctcatggacctgatc	Protospacer
***************************************.******************

15. spacer 1.1|819905|58|NZ_CP021217|CRISPRCasFinder matches to NZ_CP021798 (Sinorhizobium meliloti strain USDA1106 plasmid psymA, complete sequence) position: , mismatch: 1, identity: 0.983

cctgatggaactgatcggcgaccgcggcgaccggcgcgagcggctcatggacctgatc	CRISPR spacer
cctgatggaactgatcggcgaccgcggcgaccggcgcgaacggctcatggacctgatc	Protospacer
***************************************.******************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

626209 : 736074

Stx2-converting_phage(16.67%)

integrase,transposase

attL 684701:684715|attR 713844:715409

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014531690.1\|626209_626665_-\|transposase	transposase	NA	NA	NA	NA
WP_010967426.1\|627024_628497_-	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_013845764.1\|628578_629658_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.8e-30	39.3
WP_014528554.1\|629654_630455_-	ABC transporter permease	NA	NA	NA	NA
WP_014531691.1\|630456_631332_-	ABC transporter permease	NA	NA	NA	NA
WP_014531692.1\|631424_632435_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003536940.1\|632472_632799_-	NIPSNAP family protein	NA	NA	NA	NA
WP_010967420.1\|632804_634268_-	aldehyde dehydrogenase	NA	NA	NA	NA
WP_014531693.1\|634273_635314_-	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA
WP_015242446.1\|635310_636246_-	flavin reductase family protein	NA	NA	NA	NA
WP_014528549.1\|636242_637076_-	alpha/beta fold hydrolase	A0A1D8EVD1	Mycobacterium_phage	2.5e-07	37.4
WP_014531696.1\|637094_637697_-	amino acid synthesis family protein	NA	NA	NA	NA
WP_012477343.1\|638007_638745_-	ATP-binding protein	K4HZD4	Acidithiobacillus_phage	1.1e-57	47.5
WP_088194133.1\|638757_640287_-\|transposase	IS21 family transposase	K4I413	Acidithiobacillus_phage	2.7e-119	43.9
WP_014528546.1\|640767_641463_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_014531698.1\|642596_644258_-	nodulation protein NoeB	NA	NA	NA	NA
WP_014531699.1\|644264_645695_-	nodulation protein NoeA	NA	NA	NA	NA
WP_003534891.1\|645672_645888_-	hypothetical protein	NA	NA	NA	NA
WP_014531700.1\|646084_646636_-	nodulation acetyltransferase NodL	NA	NA	NA	NA
WP_014531703.1\|647962_648826_-	cytochrome-c oxidase, cbb3-type subunit III	NA	NA	NA	NA
WP_010967642.1\|648829_648982_-	CcoQ/FixQ family Cbb3-type cytochrome c oxidase assembly chaperone	NA	NA	NA	NA
WP_014531704.1\|648994_649726_-	cytochrome-c oxidase, cbb3-type subunit II	NA	NA	NA	NA
WP_014531705.1\|649737_651357_-	cytochrome-c oxidase, cbb3-type subunit I	NA	NA	NA	NA
WP_014531707.1\|652119_652755_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_026030503.1\|652834_653182_-	hypothetical protein	NA	NA	NA	NA
WP_014531712.1\|654976_655669_-	flavin reductase family protein	NA	NA	NA	NA
WP_167389272.1\|659125_660493_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	9.6e-28	29.7
WP_014531721.1\|662116_663043_-	transcriptional regulator NodD2	NA	NA	NA	NA
WP_017267143.1\|663399_663552_+	hypothetical protein	NA	NA	NA	NA
WP_086019418.1\|664153_665372_+\|transposase	IS3 family transposase	A0A1B0Z042	Pseudomonas_phage	3.8e-76	53.2
WP_014531728.1\|667398_668412_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.5e-14	29.9
WP_014531729.1\|668404_669415_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.0e-14	28.9
WP_017272051.1\|669411_670365_-	ABC transporter permease	NA	NA	NA	NA
WP_017272050.1\|670364_671363_-	ABC transporter permease	NA	NA	NA	NA
WP_017272049.1\|673179_674604_-	C69 family dipeptidase	NA	NA	NA	NA
WP_014531735.1\|674898_675618_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_020479503.1\|675793_676423_-	6-aminohexanoate-dimer hydrolase	NA	NA	NA	NA
WP_127616699.1\|676502_676892_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_014531738.1\|677132_678416_-	ArgE/DapE family deacylase	NA	NA	NA	NA
WP_014531740.1\|679085_679316_-	3-oxoadipate CoA-transferase	NA	NA	NA	NA
WP_017274279.1\|679333_679747_-	hypothetical protein	NA	NA	NA	NA
WP_014531743.1\|681618_683025_+	hypothetical protein	NA	NA	NA	NA
WP_014531784.1\|683099_684296_-\|transposase	IS256-like element ISRm5 family transposase	A0A0K2CZ57	Paenibacillus_phage	4.5e-74	43.6
684701:684715	attL	NA	NA	NA	NA
WP_013845338.1\|685193_685664_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
684701:684715	attL	NA	NA	NA	NA
WP_014531665.1\|686041_687616_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	8.3e-76	36.1
WP_011970372.1\|687612_688176_+	UPF0149 family protein	NA	NA	NA	NA
WP_014531746.1\|688270_689263_-	dipeptide ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	5.0e-18	30.4
WP_086017848.1\|689259_690303_-	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	1.8e-10	26.1
WP_014531748.1\|690310_691192_-	ABC transporter permease	NA	NA	NA	NA
WP_017271922.1\|691193_692135_-	ABC transporter permease	NA	NA	NA	NA
WP_014531750.1\|692134_693730_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_017271920.1\|694472_695009_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_014531752.1\|695015_695969_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_014531753.1\|695980_696784_+	CoA transferase subunit A	NA	NA	NA	NA
WP_033045863.1\|696764_697418_+	3-oxoacid CoA-transferase subunit B	NA	NA	NA	NA
WP_003537222.1\|698702_699881_+	thiolase family protein	NA	NA	NA	NA
WP_003537220.1\|699962_700430_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_020479558.1\|701285_701543_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_144005760.1\|702636_702972_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.3e-20	60.5
WP_014531761.1\|703354_704551_-\|transposase	IS91 family transposase	NA	NA	NA	NA
703269:703283	attR	NA	NA	NA	NA
WP_017275604.1\|704558_705440_-\|integrase	tyrosine-type recombinase/integrase	S5W9T9	Leptospira_phage	2.7e-31	31.5
703269:703283	attR	NA	NA	NA	NA
WP_127616826.1\|705714_707052_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_014531764.1\|706936_707848_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_017275604.1\|708959_709841_+\|integrase	tyrosine-type recombinase/integrase	S5W9T9	Leptospira_phage	2.7e-31	31.5
WP_014531761.1\|709848_711045_+\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_014531768.1\|711538_711913_-\|transposase	transposase	NA	NA	NA	NA
WP_003537652.1\|712372_713683_+	aminotransferase class III-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_014531769.1\|713711_714404_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_014531752.1\|714410_715364_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_014531770.1\|715482_716976_+	M81 family metallopeptidase	NA	NA	NA	NA
WP_020479523.1\|717043_717511_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_017272230.1\|719164_719680_-	hypothetical protein	NA	NA	NA	NA
WP_014531773.1\|719974_721066_-	uridylate kinase	NA	NA	NA	NA
WP_014531774.1\|721068_722109_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_029728238.1\|722332_722620_-	hypothetical protein	NA	NA	NA	NA
WP_003537756.1\|723947_725177_+	ATP-grasp domain-containing protein	NA	NA	NA	NA
WP_049223763.1\|725259_726342_+	lysine-2,3-aminomutase-like protein	NA	NA	NA	NA
WP_014531779.1\|727676_727973_-	hypothetical protein	NA	NA	NA	NA
WP_017266853.1\|728512_728692_+	hypothetical protein	NA	NA	NA	NA
WP_014531100.1\|728678_730754_+	recombinase family protein	D2KRD2	Lactobacillus_phage	1.5e-08	22.7
WP_012477217.1\|732245_732593_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	1.7e-26	57.1
WP_012477218.1\|732589_732964_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_003537336.1\|733108_734347_+	ATP-grasp domain-containing protein	NA	NA	NA	NA
WP_014531784.1\|734877_736074_+\|transposase	IS256-like element ISRm5 family transposase	A0A0K2CZ57	Paenibacillus_phage	4.5e-74	43.6

DBSCAN-SWA_2

747674 : 756001

uncultured_virus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014531795.1\|747674_748553_+	LysR family transcriptional regulator	Q6JIH3	Burkholderia_virus	5.6e-21	27.6
WP_014531797.1\|749144_749594_-	MucR family transcriptional regulator	A0A1P8VVG0	Erythrobacter_phage	3.8e-18	48.3
WP_010967386.1\|749963_750125_-	hypothetical protein	NA	NA	NA	NA
WP_010968824.1\|750679_750976_+	co-chaperone GroES	A0A221S4G8	uncultured_virus	8.4e-22	58.7
WP_015061278.1\|751052_752690_+	chaperonin GroEL	A0A219YK78	uncultured_virus	3.0e-177	63.4
WP_003535606.1\|754877_755081_+	cold-shock protein	A0A2H4N7Y6	Lake_Baikal_phage	1.1e-07	51.7
WP_014989928.1\|755345_755618_-	hypothetical protein	NA	NA	NA	NA
WP_107592306.1\|755632_756001_-	DUF4055 domain-containing protein	A0A0A0RTF5	Escherichia_phage	5.0e-08	33.9

DBSCAN-SWA_3

1093559 : 1198610

Sinorhizobium_phage(13.04%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014531051.1\|1093559_1094597_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_003537129.1\|1095031_1095283_+	WGR domain-containing protein	NA	NA	NA	NA
WP_014531050.1\|1095711_1096026_+	hypothetical protein	NA	NA	NA	NA
WP_014531049.1\|1096087_1096813_-	YafY family transcriptional regulator	A0A1B0RXM1	Streptococcus_phage	1.1e-11	30.8
WP_003537352.1\|1096994_1098443_+	DUF1254 domain-containing protein	A0A1J0FA30	Only_Syngen_Nebraska_virus	2.5e-10	22.0
WP_014531047.1\|1098867_1099323_-\|transposase	transposase	NA	NA	NA	NA
WP_017265675.1\|1099692_1100301_-	hypothetical protein	NA	NA	NA	NA
WP_014531045.1\|1101220_1101913_-	flavin reductase family protein	NA	NA	NA	NA
WP_086017833.1\|1104087_1104847_+\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	4.2e-25	43.9
WP_013845279.1\|1105056_1105506_-	MucR family transcriptional regulator	A0A1P8VVG0	Erythrobacter_phage	7.2e-17	47.5
WP_017267115.1\|1107313_1107907_-	NUDIX hydrolase	A0A2H4IB87	Erwinia_phage	1.9e-09	35.3
WP_014528033.1\|1108393_1108597_+	cold-shock protein	A0A2H4N7Y6	Lake_Baikal_phage	8.0e-08	51.7
WP_167389271.1\|1109236_1109383_+	hypothetical protein	NA	NA	NA	NA
WP_010970069.1\|1109509_1110844_+\|transposase	ISNCY-like element ISRm17 family transposase	NA	NA	NA	NA
WP_014528036.1\|1111242_1111764_+	hypothetical protein	NA	NA	NA	NA
WP_013845271.1\|1112153_1112393_-	hypothetical protein	J7F8X5	Agrobacterium_phage	8.6e-17	61.8
WP_026029965.1\|1112513_1112765_-	hypothetical protein	A0A291AUV5	Sinorhizobium_phage	3.8e-31	80.7
WP_014531029.1\|1113663_1113885_+	hypothetical protein	NA	NA	NA	NA
WP_003532546.1\|1114947_1115100_+	hypothetical protein	A0A076GD42	Sinorhizobium_phage	1.3e-07	60.5
WP_014531028.1\|1115229_1115553_+	thioredoxin	A0A1J0GW78	Streptomyces_phage	2.8e-18	47.5
WP_003532552.1\|1116158_1116725_+	nuclear transport factor 2 family protein	NA	NA	NA	NA
WP_014531026.1\|1116721_1116892_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_014531025.1\|1117126_1118182_+	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA
WP_012477343.1\|1118396_1119134_-	ATP-binding protein	K4HZD4	Acidithiobacillus_phage	1.1e-57	47.5
WP_014531024.1\|1119146_1120676_-\|transposase	IS21 family transposase	K4I413	Acidithiobacillus_phage	2.7e-119	43.9
WP_013845267.1\|1121855_1122053_+	sulfur carrier protein ThiS	NA	NA	NA	NA
WP_080567554.1\|1122056_1122236_+	thiazole biosynthesis family protein	NA	NA	NA	NA
WP_086017831.1\|1122280_1123382_+\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	1.7e-11	29.0
WP_013845264.1\|1123770_1124889_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_017266461.1\|1125041_1125383_+	thiazole synthase	NA	NA	NA	NA
WP_003532569.1\|1125558_1126035_-	Lrp/AsnC ligand binding domain-containing protein	NA	NA	NA	NA
WP_013845262.1\|1126178_1127198_+	1-aminocyclopropane-1-carboxylate deaminase	NA	NA	NA	NA
WP_026029944.1\|1128845_1129088_+	hypothetical protein	NA	NA	NA	NA
WP_017265677.1\|1130594_1132400_-	EAL domain-containing protein	G3MA91	Bacillus_virus	7.0e-18	33.9
WP_013845257.1\|1133514_1134105_-	NYN domain-containing protein	NA	NA	NA	NA
WP_014528047.1\|1134233_1134755_-	trypsin-like peptidase domain-containing protein	NA	NA	NA	NA
WP_017267891.1\|1134815_1135556_-	hypothetical protein	NA	NA	NA	NA
WP_003532595.1\|1135707_1136484_-	hypothetical protein	NA	NA	NA	NA
WP_003532599.1\|1137661_1138429_-	response regulator transcription factor	NA	NA	NA	NA
WP_042708814.1\|1139084_1139315_+	MucR family transcriptional regulator	A0A1P8VVG0	Erythrobacter_phage	1.2e-07	52.6
WP_012477246.1\|1139334_1140549_+\|transposase	IS701-like element ISRm31 family transposase	NA	NA	NA	NA
WP_003532601.1\|1140872_1141838_+	magnesium and cobalt transport protein CorA	NA	NA	NA	NA
WP_013845254.1\|1143054_1143384_-	hypothetical protein	NA	NA	NA	NA
WP_014531003.1\|1143512_1145123_-	tyrosinase family protein	NA	NA	NA	NA
WP_014528052.1\|1145186_1145579_-	hypothetical protein	NA	NA	NA	NA
WP_013845251.1\|1145606_1147556_-	multicopper oxidase domain-containing protein	NA	NA	NA	NA
WP_014531000.1\|1148921_1150124_-	cytochrome P450	NA	NA	NA	NA
WP_017277577.1\|1152070_1152316_+	hypothetical protein	NA	NA	NA	NA
WP_014530994.1\|1152316_1152940_-	hypothetical protein	F1C5D5	Cronobacter_phage	1.1e-52	51.5
WP_013845247.1\|1153710_1153890_+	hypothetical protein	NA	NA	NA	NA
WP_013845245.1\|1155007_1155265_+	acyl carrier protein	NA	NA	NA	NA
WP_013845244.1\|1155343_1156286_+\|transposase	IS630 family transposase	A0A2P0VP61	Tetraselmis_virus	2.7e-13	26.8
WP_014530988.1\|1156534_1156831_+	co-chaperone GroES	A0A221S4G8	uncultured_virus	3.2e-21	57.6
WP_014530987.1\|1156906_1158544_+	chaperonin GroEL	A0A219YK78	uncultured_virus	1.9e-176	63.1
WP_080567551.1\|1160557_1161034_-	thermonuclease family protein	NA	NA	NA	NA
WP_017266285.1\|1162461_1163637_-	C1 family peptidase	NA	NA	NA	NA
WP_014530979.1\|1163753_1166675_+	type 2 lantipeptide synthetase LanM family protein	NA	NA	NA	NA
WP_017266283.1\|1167316_1167610_+	hypothetical protein	NA	NA	NA	NA
WP_017274615.1\|1167675_1168296_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_014530975.1\|1168316_1169459_-	molybdopterin-synthase adenylyltransferase MoeB	NA	NA	NA	NA
WP_014530974.1\|1169463_1169763_-	MoaD/ThiS family protein	NA	NA	NA	NA
WP_017266279.1\|1169779_1170328_-	hypothetical protein	NA	NA	NA	NA
WP_014530972.1\|1170635_1171598_-	hypothetical protein	NA	NA	NA	NA
WP_080590370.1\|1171657_1172875_-	YcaO-like family protein	NA	NA	NA	NA
WP_014530970.1\|1172871_1174242_-	hypothetical protein	NA	NA	NA	NA
WP_017266275.1\|1174241_1175363_-	YcaO-like family protein	NA	NA	NA	NA
WP_014530968.1\|1175502_1175736_-	Nif11-like leader peptide family natural product precursor	NA	NA	NA	NA
WP_014530968.1\|1176044_1176278_-	Nif11-like leader peptide family natural product precursor	NA	NA	NA	NA
WP_014530968.1\|1176586_1176820_-	Nif11-like leader peptide family natural product precursor	NA	NA	NA	NA
WP_014530965.1\|1177882_1178659_+	hypothetical protein	NA	NA	NA	NA
WP_017266261.1\|1178818_1179547_+	hypothetical protein	NA	NA	NA	NA
WP_127616802.1\|1180213_1180972_-\|transposase	IS3 family transposase	U5P429	Shigella_phage	1.3e-21	43.0
WP_017266263.1\|1181054_1181489_-\|transposase	transposase	NA	NA	NA	NA
WP_017273893.1\|1182536_1184606_+	recombinase family protein	R4TNI9	Mycobacterium_phage	1.8e-14	24.3
WP_014530957.1\|1185719_1186052_-	hypothetical protein	NA	NA	NA	NA
WP_088194135.1\|1186174_1187785_-	tyrosinase family protein	NA	NA	NA	NA
WP_014530953.1\|1188972_1189191_+	hypothetical protein	NA	NA	NA	NA
WP_017275891.1\|1189440_1189689_+	hypothetical protein	NA	NA	NA	NA
WP_014530951.1\|1189981_1190401_+	helix-turn-helix transcriptional regulator	A0A1V0EEW3	Caulobacter_phage	8.9e-09	39.5
WP_014530949.1\|1190742_1191177_+	helix-turn-helix transcriptional regulator	Q8W6G2	Sinorhizobium_phage	2.7e-24	47.4
WP_017272622.1\|1192378_1193974_+	bifunctional diguanylate cyclase/phosphodiesterase	NA	NA	NA	NA
WP_162145869.1\|1195901_1196372_-\|transposase	transposase	NA	NA	NA	NA
WP_012477324.1\|1197101_1198610_+\|transposase	IS21-like element ISRm9 family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP021215

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

59216 : 120146

Planktothrix_phage(10.0%)

transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012881294.1\|59216_60341_+\|protease	site-2 protease family protein	NA	NA	NA	NA
WP_012881293.1\|60360_61560_-	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_012881292.1\|61563_63927_-	FtsX-like permease family protein	NA	NA	NA	NA
WP_012881291.1\|63932_64652_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.4e-32	36.2
WP_012881288.1\|65803_66304_-	SRPBCC family protein	NA	NA	NA	NA
WP_012881287.1\|66300_66504_-	DUF2933 domain-containing protein	NA	NA	NA	NA
WP_012881286.1\|66500_68621_-	copper-translocating P-type ATPase	A0A218MNH6	uncultured_virus	2.2e-79	34.2
WP_012881285.1\|68803_69478_+	CBS domain-containing protein	NA	NA	NA	NA
WP_012881282.1\|72145_72769_+	Spy/CpxP family protein refolding chaperone	NA	NA	NA	NA
WP_012881280.1\|73233_73722_-	tryptophan-rich sensory protein	A0A1V0S976	Catovirus	3.1e-05	29.8
WP_012881279.1\|73782_74007_-	DUF378 domain-containing protein	NA	NA	NA	NA
WP_012881278.1\|74035_74518_-	fasciclin domain-containing protein	NA	NA	NA	NA
WP_012881277.1\|74679_75264_+	cupin domain-containing protein	NA	NA	NA	NA
WP_012881276.1\|75404_75974_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_017272078.1\|76023_76548_+	dihydrofolate reductase	NA	NA	NA	NA
WP_012881272.1\|76998_77454_-	hypothetical protein	NA	NA	NA	NA
WP_017272079.1\|77757_78093_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_003526630.1\|78641_78953_+	type II toxin-antitoxin system HigB family toxin	F5A3A2	Riemerella_phage	2.6e-13	37.9
WP_003526626.1\|78970_79351_+	transcriptional regulator	A0A222YXG1	Escherichia_phage	2.9e-19	41.7
WP_012881266.1\|80456_84050_-	Ti-type conjugative transfer relaxase TraA	NA	NA	NA	NA
WP_012881265.1\|84283_84679_+	hypothetical protein	NA	NA	NA	NA
WP_012881263.1\|85141_85450_+	hypothetical protein	NA	NA	NA	NA
WP_012881262.1\|85446_87093_+	type IV secretory system conjugative DNA transfer family protein	NA	NA	NA	NA
WP_012881261.1\|87183_88257_+	dienelactone hydrolase family protein	NA	NA	NA	NA
WP_017274827.1\|88372_88858_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003537131.1\|89224_90262_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_012881257.1\|90696_90948_+	WGR domain-containing protein	NA	NA	NA	NA
WP_012881254.1\|92175_92940_-	ATP-binding protein	A0A059NT77	Lactococcus_phage	4.2e-41	41.1
WP_012881253.1\|92993_93305_+	hypothetical protein	NA	NA	NA	NA
WP_012881252.1\|93375_93639_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_012881249.1\|95468_95945_-	Lrp/AsnC ligand binding domain-containing protein	NA	NA	NA	NA
WP_012881248.1\|96089_97109_+	1-aminocyclopropane-1-carboxylate deaminase	NA	NA	NA	NA
WP_167389267.1\|97446_97551_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_017272206.1\|98061_98907_-	acetylglutamate kinase	NA	NA	NA	NA
WP_012881244.1\|98939_100463_+	hypothetical protein	NA	NA	NA	NA
WP_012881243.1\|100532_102764_+	hypothetical protein	NA	NA	NA	NA
WP_012881242.1\|102791_103781_+	hypothetical protein	NA	NA	NA	NA
WP_167389268.1\|104106_105714_+\|transposase	ISL3 family transposase	NA	NA	NA	NA
WP_017265730.1\|108229_108547_-	hypothetical protein	NA	NA	NA	NA
WP_017266443.1\|111797_112151_+	phasin family protein	NA	NA	NA	NA
WP_012881228.1\|112379_113594_+\|transposase	IS701-like element ISRm31 family transposase	NA	NA	NA	NA
WP_012881227.1\|113788_114061_-	hypothetical protein	A0A068C9B7	Rhizobium_phage	1.5e-12	46.4
WP_017267080.1\|114509_114791_+	hypothetical protein	NA	NA	NA	NA
WP_012881225.1\|114891_115317_+	MucR family transcriptional regulator	A0A1P8VVG0	Erythrobacter_phage	1.5e-16	42.2
WP_017267081.1\|115735_117514_-	insulinase family protein	NA	NA	NA	NA
WP_012881223.1\|117670_118651_-\|transposase	IS5 family transposase	A0A1B0VFY5	Salmonella_phage	4.9e-58	42.0
WP_012881221.1\|119156_120146_+\|transposase	IS5-like element ISRm33 family transposase	Q1MVF0	Enterobacteria_phage	1.1e-46	36.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP021216

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 67229

Ochrobactrum_phage(20.0%)

transposase,integrase

attL 6749:6808|attR 61889:63310

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_088194124.1\|2651_3005_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_088194125.1\|3001_3442_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_088194127.1\|3902_5300_-\|transposase	transposase	NA	NA	NA	NA
WP_080591186.1\|5997_6492_-	DUF2867 domain-containing protein	NA	NA	NA	NA
6749:6808	attL	NA	NA	NA	NA
WP_012477246.1\|6796_8011_+\|transposase	IS701-like element ISRm31 family transposase	NA	NA	NA	NA
WP_017273116.1\|8456_9230_+	hypothetical protein	NA	NA	NA	NA
WP_164820561.1\|9328_9583_+	hypothetical protein	NA	NA	NA	NA
WP_164827319.1\|9572_10547_+	hypothetical protein	NA	NA	NA	NA
WP_012477207.1\|10609_11533_-	hypothetical protein	NA	NA	NA	NA
WP_012477206.1\|11529_13341_-	hypothetical protein	NA	NA	NA	NA
WP_012477205.1\|13337_14537_-	metallophosphoesterase	NA	NA	NA	NA
WP_164820507.1\|14533_15376_-	Dam family site-specific DNA-(adenine-N6)-methyltransferase	A0A191ZD01	Erwinia_phage	1.9e-26	31.9
WP_127616472.1\|16035_16455_-	hypothetical protein	NA	NA	NA	NA
WP_026030818.1\|16553_17693_-	DUF1612 and helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_012477202.1\|17881_19033_+\|integrase	site-specific integrase	NA	NA	NA	NA
WP_029727887.1\|19456_20695_-	phosphoglycerate dehydrogenase	A0A1V0SBV6	Catovirus	7.4e-104	48.2
WP_029727888.1\|20994_22239_-	replication initiation protein RepC	L7TKN6	Rhizobium_phage	3.9e-20	27.6
WP_012477199.1\|22396_23389_-	plasmid partitioning protein RepB	A0A240F4U0	Ochrobactrum_phage	5.5e-57	39.4
WP_012477198.1\|23473_24664_-	plasmid partitioning protein RepA	A0A240F4U1	Ochrobactrum_phage	1.3e-124	57.6
WP_012477360.1\|25044_26010_+	P-type conjugative transfer ATPase TrbB	NA	NA	NA	NA
WP_017273081.1\|25999_26392_+	TrbC/VirB2 family protein	NA	NA	NA	NA
WP_012477358.1\|26384_26684_+	VirB3 family type IV secretion system protein	NA	NA	NA	NA
WP_017273083.1\|26694_29130_+	VirB4 family type IV secretion/conjugal transfer ATPase	NA	NA	NA	NA
WP_017273084.1\|29122_29929_+	P-type conjugative transfer protein TrbJ	NA	NA	NA	NA
WP_012477354.1\|29925_30129_+	entry exclusion protein TrbK	NA	NA	NA	NA
WP_017273085.1\|30122_31304_+	P-type conjugative transfer protein TrbL	NA	NA	NA	NA
WP_012477352.1\|31325_31988_+	conjugal transfer protein TrbF	NA	NA	NA	NA
WP_012477351.1\|32003_32834_+	P-type conjugative transfer protein TrbG	NA	NA	NA	NA
WP_012477350.1\|32837_33284_+	conjugal transfer protein TrbH	NA	NA	NA	NA
WP_012477349.1\|33299_34598_+	IncP-type conjugal transfer protein TrbI	NA	NA	NA	NA
WP_012477348.1\|34805_35105_+	transcriptional repressor TraM	NA	NA	NA	NA
WP_017273089.1\|35105_35804_-	autoinducer binding domain-containing protein	NA	NA	NA	NA
WP_026030850.1\|36123_37734_+	hypothetical protein	NA	NA	NA	NA
WP_017273092.1\|37723_38719_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_012477341.1\|38885_39692_-	DUF3800 domain-containing protein	NA	NA	NA	NA
WP_012477340.1\|39751_40369_-	conjugal transfer protein TraH	NA	NA	NA	NA
WP_012477339.1\|40383_41550_-	conjugal transfer protein TraB	NA	NA	NA	NA
WP_086023547.1\|41539_42046_-	conjugative transfer signal peptidase TraF	NA	NA	NA	NA
WP_017273093.1\|42102_45735_-	Ti-type conjugative transfer relaxase TraA	A0A2R8FE73	Brazilian_cedratvirus	1.5e-16	25.3
WP_012477336.1\|45986_46250_+	TraC family protein	NA	NA	NA	NA
WP_017273095.1\|46254_46470_+	type IV conjugative transfer system coupling protein TraD	NA	NA	NA	NA
WP_012477334.1\|46456_48415_+	Ti-type conjugative transfer system protein TraG	NA	NA	NA	NA
WP_017273096.1\|48431_48629_+	hypothetical protein	NA	NA	NA	NA
WP_012477331.1\|48843_49110_+	WGR domain-containing protein	NA	NA	NA	NA
WP_012477330.1\|49124_49634_+	thermonuclease family protein	NA	NA	NA	NA
WP_012477329.1\|49671_49845_-	hypothetical protein	NA	NA	NA	NA
WP_017273098.1\|50107_50278_-	hypothetical protein	NA	NA	NA	NA
WP_012477327.1\|50598_50907_-	DUF736 domain-containing protein	NA	NA	NA	NA
WP_017273099.1\|51364_51538_+	hypothetical protein	NA	NA	NA	NA
WP_017273100.1\|51906_53139_+	hypothetical protein	NA	NA	NA	NA
WP_127616468.1\|53234_53681_-	DUF2971 domain-containing protein	NA	NA	NA	NA
WP_146722434.1\|54633_56130_-\|transposase	IS21 family transposase	NA	NA	NA	NA
WP_050574253.1\|57228_57417_+	hypothetical protein	NA	NA	NA	NA
WP_012477342.1\|57569_59099_+\|transposase	IS21 family transposase	K4I413	Acidithiobacillus_phage	1.6e-119	43.9
WP_012477343.1\|59111_59849_+	ATP-binding protein	K4HZD4	Acidithiobacillus_phage	1.1e-57	47.5
WP_017273846.1\|60191_61178_+	DUF3991 and TOPRIM domain-containing protein	NA	NA	NA	NA
WP_012477246.1\|61936_63151_+\|transposase	IS701-like element ISRm31 family transposase	NA	NA	NA	NA
WP_033052679.1\|63398_66224_+	DNA methylase	I6WLR1	Burkholderia_virus	5.7e-184	42.8
61889:63310	attR	NA	NA	NA	NA
WP_012477248.1\|66648_66948_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_012477249.1\|66944_67229_-	type II toxin-antitoxin system ParD family antitoxin	A0A0N7C055	Escherichia_phage	8.4e-11	56.9

DBSCAN-SWA_2

72489 : 76916

Tupanvirus(50.0%)

integrase

attL 69057:69070|attR 77240:77253

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
69057:69070	attL	NA	NA	NA	NA
WP_088194130.1\|72489_75330_+	insulinase family protein	A0A2K9L1M6	Tupanvirus	1.8e-12	29.5
WP_017273345.1\|76034_76916_+\|integrase	tyrosine-type recombinase/integrase	S5W9T9	Leptospira_phage	1.2e-31	32.2
77240:77253	attR	NA	NA	NA	NA

DBSCAN-SWA_3

80927 : 82928

Brevibacillus_phage(50.0%)

transposase,integrase

attL 73927:73942|attR 92653:92668

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
73927:73942	attL	NA	NA	NA	NA
WP_033052680.1\|80927_81506_-\|integrase	tyrosine-type recombinase/integrase	A0A0K2CP59	Brevibacillus_phage	9.7e-06	22.5
WP_164823510.1\|81790_82928_+\|transposase	IS3 family transposase	A0A2P1JR32	Mycobacterium_phage	9.4e-21	32.8
92653:92668	attR	NA	NA	NA	NA

DBSCAN-SWA_4

93561 : 94113

Burkholderia_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012477317.1\|93561_94113_+	recombinase family protein	E5FFF9	Burkholderia_phage	1.2e-26	39.0

DBSCAN-SWA_5

97323 : 101209

Tupanvirus(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012477269.1\|97323_99180_-	glycosyltransferase	M1IFE6	Paramecium_bursaria_Chlorella_virus	6.0e-73	38.9
WP_012477270.1\|99176_100163_-	UDP-glucose 4-epimerase GalE	A0A2K9L5H6	Tupanvirus	1.2e-51	38.1
WP_017273419.1\|100162_101209_-	SDR family oxidoreductase	A0A2K9KZK0	Tupanvirus	3.2e-84	48.3

DBSCAN-SWA_6

105607 : 113807

Salmonella_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012881181.1\|105607_108580_-\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	3.5e-75	26.7
WP_012881182.1\|108620_109349_+	recombinase family protein	A0A0F7LA37	Escherichia_phage	1.4e-22	44.7
WP_012881183.1\|109345_110707_+	hypothetical protein	NA	NA	NA	NA
WP_012477276.1\|111005_113807_-	cation-translocating P-type ATPase	M1IAU8	Acanthocystis_turfacea_Chlorella_virus	8.7e-68	26.9

DBSCAN-SWA_7

118878 : 119562

Streptococcus_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_017273848.1\|118878_119562_-\|transposase	IS6 family transposase	A0A1X9I6C6	Streptococcus_phage	3.0e-38	41.1

DBSCAN-SWA_8

123721 : 124534

Lactococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_088194105.1\|123721_124534_-	ATP-binding protein	A0A059NT77	Lactococcus_phage	1.5e-28	35.7

DBSCAN-SWA_9

134124 : 139000

Catovirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_017273961.1\|134124_135636_-	AMP-binding protein	A0A1V0SBX8	Catovirus	5.8e-18	26.2
WP_029727950.1\|135637_139000_-	amino acid adenylation domain-containing protein	A0A2K9KZV5	Tupanvirus	3.5e-47	26.3

DBSCAN-SWA_10

147069 : 156895

Tupanvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012477304.1\|147069_150408_+	non-ribosomal peptide synthetase	A0A2K9KZV5	Tupanvirus	8.4e-94	25.3
WP_026030980.1\|150454_156895_+	non-ribosomal peptide synthetase	A0A2K9KZV5	Tupanvirus	1.2e-115	24.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

4. NZ_CP021218

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP021218_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP021218_1

794835-794952

Orphan

Consensus_repeat	Method
TGCCGCCCGCACCGCCGCTGCCGCCGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP021218_1

>merge|NZ_CP021218|1|794835-794952|CRISPRCasFinder
GATCGACCTCGCCGCCGCTACCGCCGACACCGCCGCTGCCGCCGACGACGAGATCGATCGTGTGGCTGTGCTCTTTTTCGGCGGCCGTGCTGCTTCCGGCGCCGCCGACGCCGCCGCC

>NZ_CP021218|1|1|794835-794952|CRISPRCasFinder
GATCGACCTCGCCGCCGCTACCGCCGA	CACCGCCGCTGCCGCCGACGACGAGATCGATCGTGTGGCTGTGCTCTTTTTCGGCGGCCGTGC
TGCTTCCGGCGCCGCCGACGCCGCCGCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP021218.1\|WP_015008257.1\|789063_789651_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021218.1\|WP_014527142.1\|807663_808827_-\|putative-2-aminoethylphosphonate-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|274496
NZ_CP021218.1\|WP_014527144.1\|811821_813279_-\|phosphonoacetaldehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|132294
NZ_CP021218.1\|WP_010975822.1\|813275_814550_-\|phosphonoacetate-hydrolase	unknown	unknown	gnl\|CDD\|131388
NZ_CP021218.1\|WP_017263486.1\|800697_801480_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225818
NZ_CP021218.1\|WP_010969728.1\|810580_811657_+\|ISAs1-like-element-ISRm21-family-transposase	unknown	unknown	gnl\|CDD\|379382
NZ_CP021218.1\|WP_017268478.1\|799558_800710_+\|histidine-kinase	unknown	unknown	gnl\|CDD\|225814
NZ_CP021218.1\|WP_010975825.1\|808916_809939_-\|putative-2-aminoethylphosphonate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|274494
NZ_CP021218.1\|WP_017268479.1\|805615_807658_-\|putative-2-aminoethylphosphonate-ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|274495
NZ_CP021218.1\|WP_017266907.1\|781696_782206_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379237
NZ_CP021218.1\|WP_010975834.1\|791335_792253_-\|sulfurtransferase	unknown	unknown	gnl\|CDD\|225450
NZ_CP021218.1\|WP_017263485.1\|801568_801967_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021218.1\|WP_010970069.1\|787535_788870_+\|ISNCY-like-element-ISRm17-family-transposase	unknown	unknown	gnl\|CDD\|225581
NZ_CP021218.1\|WP_010970069.1\|782511_783846_+\|ISNCY-like-element-ISRm17-family-transposase	unknown	unknown	gnl\|CDD\|225581
NZ_CP021218.1\|WP_029728006.1\|778670_780452_-\|cation:proton-antiporter	unknown	unknown	gnl\|CDD\|179625
NZ_CP021218.1\|WP_010970069.1\|784182_785517_+\|ISNCY-like-element-ISRm17-family-transposase	unknown	unknown	gnl\|CDD\|225581
NZ_CP021218.1\|WP_029728130.1\|802092_805431_-\|pre-peptidase-C-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|225483
NZ_CP021218.1\|WP_010970069.1\|785864_787199_+\|ISNCY-like-element-ISRm17-family-transposase	unknown	unknown	gnl\|CDD\|225581
NZ_CP021218.1\|WP_017271875.1\|790014_791256_-\|YeeE/YedE-family-protein	unknown	unknown	gnl\|CDD\|377230
NZ_CP021218.1\|WP_033043755.1\|781068_781542_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP021218.1\|WP_010969728.1\|810580_811657_+\|ISAs1-like-element-ISRm21-family-transposase	gnl\|CDD\|379382	pfam13808, DDE_Tnp_1_assoc, DDE_Tnp_1-associated. This domain is frequently found N-terminal to the transposase, IS family DDE_Tnp_1, pfam01609 and its relatives.	3.41222e-33
NZ_CP021218.1\|WP_014527142.1\|807663_808827_-\|putative-2-aminoethylphosphonate-ABC-transporter-ATP-binding-protein	gnl\|CDD\|274496	TIGR03265, PhnT2, putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely. [Transport and binding proteins, Amino acids, peptides and amines].	0
NZ_CP021218.1\|WP_014527144.1\|811821_813279_-\|phosphonoacetaldehyde-dehydrogenase	gnl\|CDD\|132294	TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase. This family of genes are members of the pfam00171 NAD-dependent aldehyde dehydrogenase family. These genes are observed in Ralstonia eutropha JMP134, Sinorhizobium meliloti 1021, Burkholderia mallei ATCC 23344, Burkholderia thailandensis E264, Burkholderia cenocepacia AU 1054, Burkholderia pseudomallei K96243 and 1710b, Burkholderia xenovorans LB400, Burkholderia sp. 383 and Polaromonas sp. JS666 in close proximity to the PhnW gene (TIGR02326) encoding 2-aminoethyl phosphonate aminotransferase (which generates phosphonoacetaldehyde) and PhnA (TIGR02335) encoding phosphonoacetate hydrolase (not to be confused with the alkylphosphonate utilization operon protein PhnA modeled by TIGR00686). Additionally, transporters believed to be specific for 2-aminoethyl phosphonate are often present. PhnW is, in other organisms, coupled with PhnX (TIGR01422) for the degradation of phosphonoacetaldehyde (GenProp0238), but PhnX is apparently absent in each of the organisms containing this aldehyde reductase. PhnA, characterized in a strain of Pseudomonas fluorescens that has not het been genome sequenced, is only rarely found outside of the PhnW and aldehyde dehydrogenase context. For instance in Rhodopseudomonas and Bordetella bronchiseptica, where it is adjacent to transporters presumably specific for the import of phosphonoacetate. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme.	0
NZ_CP021218.1\|WP_010975822.1\|813275_814550_-\|phosphonoacetate-hydrolase	gnl\|CDD\|131388	TIGR02335, phosphonoacetate_hydrolase, phosphonoacetate hydrolase. This family consists of examples of phosphonoacetate hydrolase, an enzyme specific for the cleavage of the C-P bond in phosphonoacetate. Phosphonates are organic compounds with a direct C-P bond that is far less labile that the C-O-P bonds of phosphate attachment sites. Phosphonates may be degraded for phosphorus and energy by broad spectrum C-P lyase encoded by large operon or by specific enzymes for some of the more common phosphonates in nature. This family represents an enzyme from the latter category. It may be found encoded near genes for phosphonate transport and for pther specific phosphonatases.	1.66756e-171
NZ_CP021218.1\|WP_017263486.1\|800697_801480_+\|response-regulator-transcription-factor	gnl\|CDD\|225818	COG3279, LytT, Response regulator of the LytR/AlgR family [Transcription / Signal transduction mechanisms].	1.24305e-66
NZ_CP021218.1\|WP_017268478.1\|799558_800710_+\|histidine-kinase	gnl\|CDD\|225814	COG3275, LytS, Putative regulator of cell autolysis [Signal transduction mechanisms].	1.22141e-170
NZ_CP021218.1\|WP_010975825.1\|808916_809939_-\|putative-2-aminoethylphosphonate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|274494	TIGR03261, phnS2, putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein. This ABC transporter extracellular solute-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely. [Transport and binding proteins, Amino acids, peptides and amines].	0
NZ_CP021218.1\|WP_017268479.1\|805615_807658_-\|putative-2-aminoethylphosphonate-ABC-transporter-permease-subunit	gnl\|CDD\|274495	TIGR03262, PhnU2, putative 2-aminoethylphosphonate ABC transporter, permease protein. [Transport and binding proteins, Amino acids, peptides and amines].	0
NZ_CP021218.1\|WP_017266907.1\|781696_782206_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379237	pfam13523, Acetyltransf_8, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	1.94853e-16
NZ_CP021218.1\|WP_010975834.1\|791335_792253_-\|sulfurtransferase	gnl\|CDD\|225450	COG2897, SseA, Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism].	4.53138e-90
NZ_CP021218.1\|WP_010970069.1\|787535_788870_+\|ISNCY-like-element-ISRm17-family-transposase	gnl\|CDD\|225581	COG3039, COG3039, Transposase and inactivated derivatives, IS5 family [DNA replication, recombination, and repair].	3.21849e-41
NZ_CP021218.1\|WP_010970069.1\|782511_783846_+\|ISNCY-like-element-ISRm17-family-transposase	gnl\|CDD\|225581	COG3039, COG3039, Transposase and inactivated derivatives, IS5 family [DNA replication, recombination, and repair].	3.21849e-41
NZ_CP021218.1\|WP_029728006.1\|778670_780452_-\|cation:proton-antiporter	gnl\|CDD\|179625	PRK03659, PRK03659, glutathione-regulated potassium-efflux system protein KefB; Provisional.	6.10598e-170
NZ_CP021218.1\|WP_010970069.1\|784182_785517_+\|ISNCY-like-element-ISRm17-family-transposase	gnl\|CDD\|225581	COG3039, COG3039, Transposase and inactivated derivatives, IS5 family [DNA replication, recombination, and repair].	3.21849e-41
NZ_CP021218.1\|WP_029728130.1\|802092_805431_-\|pre-peptidase-C-terminal-domain-containing-protein	gnl\|CDD\|225483	COG2931, COG2931, RTX toxins and related Ca2+-binding proteins [Secondary metabolites biosynthesis, transport, and catabolism].	1.63855e-24
NZ_CP021218.1\|WP_010970069.1\|785864_787199_+\|ISNCY-like-element-ISRm17-family-transposase	gnl\|CDD\|225581	COG3039, COG3039, Transposase and inactivated derivatives, IS5 family [DNA replication, recombination, and repair].	3.21849e-41
NZ_CP021218.1\|WP_017271875.1\|790014_791256_-\|YeeE/YedE-family-protein	gnl\|CDD\|377230	pfam04143, Sulf_transp, Sulphur transport. This is an integral membrane protein. It is predicted to have a function in the transport of sulphur-containing molecules. It contains several conserved glycines and an invariant cysteine that is probably an important functional residue.	4.40021e-67

>NZ_CP021218.1|WP_010975834.1|791335_792253_-|sulfurtransferase
MKMRIASLAFTLSVLASSALAADISPLVDAEWVKANAGDKDVVILDIRDKVAETELGDKPYIQGAVVAPYASAGWRTEVGGVPGMLPPLEQITKLIGDLGIDNDDHVVIVPWGTDSTEFGGATRVYWTFKYLGHEEVSILDGGWRQYDAAGGTRSAEAVKPEPATFHAEPQEKLLATTEEVAAALKAGVKLIDGRPAEQHQGKSKSPVVRANGTIPGSINIEHSKLYSQDHALFARPETVKALTEAAGLAAEEENITFCNTGHWASVTWFALSEVLGNKNTTMYDGSMAEWTADPARPVENKSGT
>NZ_CP021218.1|WP_017271875.1|790014_791256_-|YeeE/YedE-family-protein
MPHRRRDFEMTDISFDRSRYLPSAVVDRGPALVAGGALLIGLLVIAQLIDLRQAALFVVGGLLGVALYHGSFGFTGGWRRMVVERRGRGIRAQMLMIGVAALAMIPLISAGSLGGQPLVGALAPVGVSVLVGAAMFGLGMQLGGGCGSGTLFTVGGGSARMLVTLTFFIVGALIGSAHLPWWLTLPSFGTIDLGRQLGTGTAILATLAGLGLVALATALIERRAHGNIEREPEPSRPGWTWLLYGPWPLVGAGLLMALLNVATLLLAGHPWSVTFGFGLWGAKAAQAVGVPVATWEFWNWPGPQAALSASVLADVTSVMNFGIVLGAAAAASLAGKFAPKAKIPLGSMLAAVVGGLLMGYGARLSFGCNIGALFSGIASGSLHGWLWFATAFVGSFVGIWMRPLFGLDGFKKK
>NZ_CP021218.1|WP_015008257.1|789063_789651_-|hypothetical-protein
MAEEAVELARREIAYCETLLAKGGLNVLSETFRDTAEIKAWDHYPTGDVFDPTSGAQWFYHCHPAEEGAEEHGHFHCFLRPQGPQGPIHHLAAVGVDAHGRLLRLFTVNQWVVGDDWLGAEGTIALLPRFDVQMPRPSYLVNRWLTAIFTAYEQQITELIRERDRTLLAHRQPESVEARQDRALEVTSEFKLSGR
>NZ_CP021218.1|WP_010970069.1|787535_788870_+|ISNCY-like-element-ISRm17-family-transposase
MRQERTVQGSIFDLFAEHEIGRELEAMSQWLDAHRDLLNLVTSDLRRQGVTETGRQGLPSEAVLRCALLKQYRQLSYEELAFHLEDSASFRAFARLPWGWSPKKSVLHKTISAIRADTWEAVNKMLLASARQERLESGRVVRVDSTVTAALIHEPSDSSLLWDCVRVMVRLLQQADSLGSTIPWHDHCRAAKKRARVIEYTRGRPKRVQHYRALLRIARNTLDYLQQAAAQLPLAAGPAGKLWQAQVRHYQPLITQIIAQTERRVLAGEAVPAGEKLVSLFEPHADIIVKGSRDVDYGHKLNLTTGRSGLILDLVIEAGNPADSERLLPLLERHIAFYGEAPRQAAADGGYASRENLRQAKAWGVRDMAFHKKSGLRIEDMVRSRWVYRKLRNFRAGIEAGISCLKRTYGLARCTWRGLDHFKTYVWSSVVAYNLALFARLRPT
>NZ_CP021218.1|WP_010970069.1|785864_787199_+|ISNCY-like-element-ISRm17-family-transposase
MRQERTVQGSIFDLFAEHEIGRELEAMSQWLDAHRDLLNLVTSDLRRQGVTETGRQGLPSEAVLRCALLKQYRQLSYEELAFHLEDSASFRAFARLPWGWSPKKSVLHKTISAIRADTWEAVNKMLLASARQERLESGRVVRVDSTVTAALIHEPSDSSLLWDCVRVMVRLLQQADSLGSTIPWHDHCRAAKKRARVIEYTRGRPKRVQHYRALLRIARNTLDYLQQAAAQLPLAAGPAGKLWQAQVRHYQPLITQIIAQTERRVLAGEAVPAGEKLVSLFEPHADIIVKGSRDVDYGHKLNLTTGRSGLILDLVIEAGNPADSERLLPLLERHIAFYGEAPRQAAADGGYASRENLRQAKAWGVRDMAFHKKSGLRIEDMVRSRWVYRKLRNFRAGIEAGISCLKRTYGLARCTWRGLDHFKTYVWSSVVAYNLALFARLRPT
>NZ_CP021218.1|WP_010970069.1|784182_785517_+|ISNCY-like-element-ISRm17-family-transposase
MRQERTVQGSIFDLFAEHEIGRELEAMSQWLDAHRDLLNLVTSDLRRQGVTETGRQGLPSEAVLRCALLKQYRQLSYEELAFHLEDSASFRAFARLPWGWSPKKSVLHKTISAIRADTWEAVNKMLLASARQERLESGRVVRVDSTVTAALIHEPSDSSLLWDCVRVMVRLLQQADSLGSTIPWHDHCRAAKKRARVIEYTRGRPKRVQHYRALLRIARNTLDYLQQAAAQLPLAAGPAGKLWQAQVRHYQPLITQIIAQTERRVLAGEAVPAGEKLVSLFEPHADIIVKGSRDVDYGHKLNLTTGRSGLILDLVIEAGNPADSERLLPLLERHIAFYGEAPRQAAADGGYASRENLRQAKAWGVRDMAFHKKSGLRIEDMVRSRWVYRKLRNFRAGIEAGISCLKRTYGLARCTWRGLDHFKTYVWSSVVAYNLALFARLRPT
>NZ_CP021218.1|WP_010970069.1|782511_783846_+|ISNCY-like-element-ISRm17-family-transposase
MRQERTVQGSIFDLFAEHEIGRELEAMSQWLDAHRDLLNLVTSDLRRQGVTETGRQGLPSEAVLRCALLKQYRQLSYEELAFHLEDSASFRAFARLPWGWSPKKSVLHKTISAIRADTWEAVNKMLLASARQERLESGRVVRVDSTVTAALIHEPSDSSLLWDCVRVMVRLLQQADSLGSTIPWHDHCRAAKKRARVIEYTRGRPKRVQHYRALLRIARNTLDYLQQAAAQLPLAAGPAGKLWQAQVRHYQPLITQIIAQTERRVLAGEAVPAGEKLVSLFEPHADIIVKGSRDVDYGHKLNLTTGRSGLILDLVIEAGNPADSERLLPLLERHIAFYGEAPRQAAADGGYASRENLRQAKAWGVRDMAFHKKSGLRIEDMVRSRWVYRKLRNFRAGIEAGISCLKRTYGLARCTWRGLDHFKTYVWSSVVAYNLALFARLRPT
>NZ_CP021218.1|WP_017266907.1|781696_782206_-|GNAT-family-N-acetyltransferase
MIEFRSLTEADFLMLCEWLNSPHMRAHYQKTPITIEEVQGKYSERLSPSHPTHCHIARYNGEPFGMLQCYSLRNYPDFASEIGEQDGVAVDLFIGEERFIGKGFGKAMLRSYVLNVVPSIFPQDCKCFICHAKENKIAIRGSLSAGFLPYRDVIERGVESLLLSFDRPI
>NZ_CP021218.1|WP_033043755.1|781068_781542_+|hypothetical-protein
MYTLKPGIKKDPVRRWALPDRVFFGNGACAILAGVFLSEAPLPGFYAERIIPGEGFAGNHIFVTDGVIAFDHHGYSLRSRLLTYHTNGWAGRSPEGWNCRLERVTFDLLDRRDLNDNQMLGREQYLHDPIVRAKTYLGRVNHAEASARARAKNGAAI
>NZ_CP021218.1|WP_029728006.1|778670_780452_-|cation:proton-antiporter
MAAESHGIDLLPVIALLGAAVVAAPLFKRIGLGSVLGYLAAGIAIGPFGLRLLQEPSSILHVAELGVVMFLFIIGLEMRPSRLWGLRREIFGLGIVQVALCALLLTGVGVLTGFPVAPSFVAGAGFVLTSTAIVMQLLEERREMAAPKGQRIVSILLVEDMAIVPLLALVAFLAPIVPGSVAASGAIDWLSIAIGLVTIAGLVLAGRYLLNPLFGLIAGVEAREVMTAAALMVVLGSAYVMQLGGLSMAMGAFLAGVLLSESTFRHQLEADVEPFRGILLGLFFLAVGMSLDLGVIARNWAMILFYVAAYMVVKAIVIYLVARLFRASNWEAIERAVFMAQGGEFAFVLYAAALGTGIISSEENAILTAIIIVSMMVTPLLIAALRLVERNIPLSTDGVERPENLSGNVLIIGFGRVGQIVSQVLLTRGHVISIIDTDVEMINTAREFDFKVYYGDGKRLDILHAAGAERASAIVVCVDKADDATKIVELIKAEFPLIPVLARASDRRHALDLITAGADFHIRETFESSLVLGQKALEALGADLPEVAEIIEKVRQRDEKRLELELVGGLYAGRPLFSGKLEPVEAMPPGGSA
>NZ_CP021218.1|WP_017268478.1|799558_800710_+|histidine-kinase
MVVIAEPDLRPDLSGSHIADPSYRRSRTKRKFNGSGTVLVGALGSFWRAQTAGWLFGALFAVVSRILAFEDVAFAFALTAVLEPLGFALTTLAYRIFRHRIGGVTLTVVAVALALSIAGGVLQMLIANAMKDVLQPNIDPDYGANGSVIPAIYYTLIFLGWSLAYLWIKADADARKQRMRRHRAREEALRAELHQLRLQLDSHFLFNVLNTVAMEIPEEPDTALEMIHRITAYLRYLLENQTRRICPLSDEIEAMMAYIRIQELRFEGRLDCVVEVDPAARPVAVPHLILQPLVENAVKHGLRSPASRFAVGITVECRDADLFIEISNPGRLEAGERDRPPIGLANIRRRLELHYPLGHALTLIQAGDKVIARLMLRGAACFA
>NZ_CP021218.1|WP_017263486.1|800697_801480_+|response-regulator-transcription-factor
MLRVMVVDDEPPARRGLKRLMQAHPDVEVVGEAGSLDQAHQLTHALRPDAIFLDIDLGDDDGFGLIKRLDQVPAIVFVTGHGTYAPQAFDVAALDFLLKPVERQRLALTLERLRRYRHALELGEKVLDDTTTVPPVAMPGRRRLHIRMAGQTLVLPTDGIAMLAAEADFTRIVMADARDHLVCRLLGQFDAELPTPPFFRVSRSLIINLDRVVRVRSQDKGRSLLSLGRSLTPIMLGRVATTRLRRALDGFQRVGTVPDG
>NZ_CP021218.1|WP_017263485.1|801568_801967_-|hypothetical-protein
MKRPTDRRTVLMTAGAAAVAAVAGPVAAQSPDIRGAVTFEGGAVPEGHLEIYLEDPAIQDEARRRATETRIKSDGTSTSIAFSLSPPVRVNASPTLRIVARLERADGWLVARGSTRFEAGSPVYVTLNPVMY
>NZ_CP021218.1|WP_029728130.1|802092_805431_-|pre-peptidase-C-terminal-domain-containing-protein
MPNPSQTSDNWWINDQTPDNPYGKSEDYESFLDYLGALPRSLTPEMAAGTLRINVYELNDHPEYKAAAIGALQMWASVTPLKFEIVDDTPFDSTTDWMEVVSPELGEEDDGSAYSSNRYVSIGQRFHDTEPNKTDIGGYVFDSFIHEFGHEFGLNHPGLYNYSGPGGVQINYLNNATWTYDRQQYSVMSYFDGIDVGETSRWSASTPLMADIEAVIRRFFSTVDENGVRTYQHIDLNTGDNVYGFGSTQYGYQLTSSGMQHDIGFAIHDTGGVDTIDFSGSTAGTILDLRAGQFSSVNGHSNNVSIFAGHNADAVDYYIETGIGSRFDDILIGNDGANTLDGRSGGDRMAGNGGDDTYFVDSLEDIVREEANGGNDTVILLSRNLKIRKIANVENIIYADESTTQPGGGGASPPSAGDNTMTSIIFGGNGNDTLDGGAGDDTIFGKGGDDLIIGGRDSLASRDINNTIDVEDLEDQTESDDGNDTLYGGGGNDTILGGQGNDILDGGAGDDVLSGQDGVDIFRGGAGVDTVDFSKESPFQLLVNLATNVASGGTASGDTFHSIENLIGSDDRIDRFIGTSAANHFWGQGGGDYFNGGGGNDILDGGNDGDILYGEAGNDTVIGGAGQDYLDGGSGIDTVVYEGSPDGVTIDLANGTASGGDGDGPVQIVGRGAVIRHDILVGFENAAGSSFDDHLIGNALANELSGGAGDDTLTGGGGADRLNGGAGSDTADYADATSGVRLSLAGGRSGGDTYVSIENLAGSGFGDRLTGNGAANVLTGQGGNDTIDGGRGDDTLLGDFAYQGDAPPRPGMGSGYATLGPDAANNSIAAAFDISNNFSLTSDPDIFDSTTILHTTVNATGNGRGGYYKIDLAAGTVITIDIDGIADPNVHDSWVRLLDSAGNIVAQNDDGGGDPGSTSNRDSSLVFVAQETGTYYILEGSWSPTAPGDGWAEAVPAGSTYELNVSVEFPPRPAQPGVAGSDTLIGGGGSDLLDGGLAADTLTGGAGEDTFRFSTALGNGNVDWIKDFNVIDDTILLDNLIFESVGGEGALALGAFYGSAGGVAHDADDRIIYDADSGVLSYDADGAGEIAAIQYAQLSTNLKLSAADFIII
>NZ_CP021218.1|WP_017268479.1|805615_807658_-|putative-2-aminoethylphosphonate-ABC-transporter-permease-subunit
MTLAVDFLPPGRAVRQQISGDDWLKRAVMLVVGIYLVVALALPLFVMLSKSFSTYTFDLHQFEFQVSDQSGQGWSDPVTAAALNAAVAAFPESDLKASADGRLQAAKLFPDFSFRSPVRYRIRGTSDETHFLAGSQLVRGTEWQEYDSNNFRRVMLRPSRSIGLSNFAEYFSTPSLVRSIKNSVTMALISTAVTLVVAFGLAYALNRSRMPGKGLFKLIVTIPILVPSLLPGIALVYLFGNQGVFRDLLLGHSIYGPLGIVVGSVFFTLPHAFLIISTALWVADARHYEAATSLRASKWRTFWTVTVPGARYGLISAAFVVFTLVITDFGLPKVIGGQYGMLAVDIYKQVIGQQNFEMGAVVSVILLVPAFLAFAVDRLTQRRQVALLSARAVPYEPKPRRGFDAASFAFCTLVAVFVLGMIGMCQVAALVKFWPYDLSLSLRNYAFDLMDGGGWDSYYNSIRLALMTAVIGSLIVFTGAYMVEKTKGFGLGRATFHMLAMLPMAVPGMVLGLAYIFFFNSAANPLHGIYGTMTILVLCTVTHFYTVAHLTALTALKQLDPEFEAVAGSLKIPFYKLFFRVTLPVCLPAVLEIAIYLFVNAMTTVSAVVFLYATDTKLASVAILNMDDAGDIAPAAAMGMMIFYTNVAAKLLHAFVSRLLLARTQGWRRVSQSAAATVPH
>NZ_CP021218.1|WP_014527142.1|807663_808827_-|putative-2-aminoethylphosphonate-ABC-transporter-ATP-binding-protein
MKHATAPAEPAMPASATRQIEGRPFLEIDGLWKAYGDFVALRDIDLQVKEGEFICFLGPSGCGKTTLLRAIAGLDIQSRGTICQGGQDISRLPPAQRDYGIVFQSYALFPNLTIEKNIAFGLENIGRPRREIASRVSELLELVGLSSQGRKYPAQLSGGQQQRVALARAMAISPGLLLLDEPLSALDAKVRVHLRHEIKELQRKLGVTTIMVTHDQEEALAMADRIVVMNQGGIEQVGTPTEIYRHPKTLFVADFIGETNQFPATVGKGAQVEIGHTRFACAEHRLPSGASVVAAVRPADIIPHGAAAHRATGLDAVGNADNLIDAHVEDMEFLGMFWRTRLSAPRLKEKALVADFSTNAVRRLSIEIGSAIQVEIPQERLLLFAKA
>NZ_CP021218.1|WP_010975825.1|808916_809939_-|putative-2-aminoethylphosphonate-ABC-transporter-substrate-binding-protein
MPFSKIFLGAGTALILASSAAYAETELTVYTSIEAVDLDRYKETFEKAHPDIKINWVRDSTGVMTAKLLAEKDNPQADVVWGVAATSLLLLKSEGMLEPYSPKNVEALDPRFVDGDKPPSWVGMDAYVAALCYNTVEAGKLGLTPPTSWKDLTKPEYKGHVVMPNPNSSGTGFLDVSAWLQTFGEEEAWSFMDALHENIAAYTHSGSKPCKMAASGETVIGVSFEFPGAKAKTSGAPIDIIFPSEGSGWEAEATAIIAGTANLEAAKTLVDWSISKEANEMYNVGYAVVAYPGVAKPIENLPDDVADKMIKNDFEWAANNRARILKEWQKRYDAKSEPKS
>NZ_CP021218.1|WP_010969728.1|810580_811657_+|ISAs1-like-element-ISRm21-family-transposase
MSRFAACFEDLPDPRGRNARHPLTSILFIAVAAIVCGAESCTDMADFGVAKKKWLKTIVPLPYGIPSHDTFSTVFRHLDPDAFDAAFRRLTASFAQGLEGVVAIDGKAVRGAYRRAAKATPLHFVNVWAAGPGLVIGQKLAPGRNEVQGALDALALLALEGSIVTADALHCRPDTARAILAAGGDYALALKANQPGLLAQALARIEDADHVESIQIAAETAHDRTETRRASVVAVDDINFPGLQAIGCVETTSRHTNGHLTSHVRYFLLSTTMSPSALIEVVRTHWQIENKLHWVLDVHFREDAARNRKDNGPQNIAFLRKIALNLLRSHPDKASIRRKIKKAGWDDQFLTSLIAHMR
>NZ_CP021218.1|WP_014527144.1|811821_813279_-|phosphonoacetaldehyde-dehydrogenase
MTKAEVIIAVRHEPMRIAGRLVDTDDRVEVRYPWNDTVVGTVPAGRAEHAREAFAIAAAYQPKLTRYERQKILLATAEALAARKEEISDVITLELGISKADSLYEVGRAFDVFTLAGQMCIRDDGEIFSCDLTPHGKARKIFTMREPLTAISAITPFNHPLNMVAHKVAPAIATNNCVVVKPTELTPMTALLLADILYEAGLPPEMLSVVTGWPADIGMEMITNPHVDLVTFTGSVPVGKLIAANAHYKRQVLELGGNDPLIILNDLSDDDLARAADLAVAGATKNSGQRCTAVKRILCQESVADRFVPLVLERAKRLRFGDPMDRSTDLGTVIHEKAAALFEERVMRAAEEGADILYHPGRSGALLPPIVVDRVPHQSDLVLEETFGPIIPIVRVPDDDDATITLSNSTAFGLSSGVCTNDYRRMQKYIAGLKVGTVNIWEVPGYRIEMSPFGGIKDSGNGYKEGVIEAMKSFTNVKTFSLPWP
>NZ_CP021218.1|WP_010975822.1|813275_814550_-|phosphonoacetate-hydrolase
MNQMSKISVTVNGRRYPWPRVPAIAVCLDGCEPAYLDAAIDAGLMPALKRIKERGAVRLAHSVIPSFTNPNNLSIATGSPPAVHGICGNYLYEPSTGEEVMMNDPKFLRAPTIFQAFYDAGARVAVVTAKDKLRALLGKGLRFDEGRAVCFSSEKSDKATRAEHGIDNASAWLGRPVPEVYSAALSEFVFAAGVKLLREFRPDIMYLTTTDYVQHKYAPGVPEANSFYEMFDRYLAELDGLGAAIVVTADHGMKPKHKADGSPDVIYVQDLLDEWLGKDAARVILPITDPYVVHHGALGSFATAYLPDGCDRSEIMARLKAIQGVDVVLGREEACRRFELPEDRIGDIVLVSSENKTLGTSEHRHDLAALDEPLRSHGGLTEQEVPFIVNRVLPELPNAPRLRNFDAFFYAVTAAAEAGAEGGL

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Crispr_ID: NZ_CP021218_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP021218_2

795042-795141

Orphan

Consensus_repeat	Method
TGCCGCCCGCACCGCCGCTGCCGCCGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP021218_2

>merge|NZ_CP021218|2|795042-795141|CRISPRCasFinder
TGCCGCCCGCACCGCCGCTGCCGCCGAAGCCGCCGCCGACGGTGATCCTGCCCGCCGCCTCGTCGGAACCGTCGCCGCCCTGCCCGCCACCGCCGCCGAT

>NZ_CP021218|2|2|795042-795141|CRISPRCasFinder
TGCCGCCCGCACCGCCGCTGCCGCCGA	AGCCGCCGCCGACGGTGATCCTGCCCGCCGCCTCGTCGGAACCGT
CGCCGCCCTGCCCGCCACCGCCGCCGAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP021218.1\|WP_015008257.1\|789063_789651_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021218.1\|WP_014527142.1\|807663_808827_-\|putative-2-aminoethylphosphonate-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|274496
NZ_CP021218.1\|WP_014527144.1\|811821_813279_-\|phosphonoacetaldehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|132294
NZ_CP021218.1\|WP_010975822.1\|813275_814550_-\|phosphonoacetate-hydrolase	unknown	unknown	gnl\|CDD\|131388
NZ_CP021218.1\|WP_017263486.1\|800697_801480_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225818
NZ_CP021218.1\|WP_010969728.1\|810580_811657_+\|ISAs1-like-element-ISRm21-family-transposase	unknown	unknown	gnl\|CDD\|379382
NZ_CP021218.1\|WP_017268478.1\|799558_800710_+\|histidine-kinase	unknown	unknown	gnl\|CDD\|225814
NZ_CP021218.1\|WP_010975825.1\|808916_809939_-\|putative-2-aminoethylphosphonate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|274494
NZ_CP021218.1\|WP_017268479.1\|805615_807658_-\|putative-2-aminoethylphosphonate-ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|274495
NZ_CP021218.1\|WP_017266907.1\|781696_782206_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379237
NZ_CP021218.1\|WP_010975834.1\|791335_792253_-\|sulfurtransferase	unknown	unknown	gnl\|CDD\|225450
NZ_CP021218.1\|WP_017263485.1\|801568_801967_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021218.1\|WP_010970069.1\|787535_788870_+\|ISNCY-like-element-ISRm17-family-transposase	unknown	unknown	gnl\|CDD\|225581
NZ_CP021218.1\|WP_010970069.1\|782511_783846_+\|ISNCY-like-element-ISRm17-family-transposase	unknown	unknown	gnl\|CDD\|225581
NZ_CP021218.1\|WP_029728006.1\|778670_780452_-\|cation:proton-antiporter	unknown	unknown	gnl\|CDD\|179625
NZ_CP021218.1\|WP_010970069.1\|784182_785517_+\|ISNCY-like-element-ISRm17-family-transposase	unknown	unknown	gnl\|CDD\|225581
NZ_CP021218.1\|WP_029728130.1\|802092_805431_-\|pre-peptidase-C-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|225483
NZ_CP021218.1\|WP_010970069.1\|785864_787199_+\|ISNCY-like-element-ISRm17-family-transposase	unknown	unknown	gnl\|CDD\|225581
NZ_CP021218.1\|WP_017271875.1\|790014_791256_-\|YeeE/YedE-family-protein	unknown	unknown	gnl\|CDD\|377230
NZ_CP021218.1\|WP_033043755.1\|781068_781542_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP021218.1\|WP_010969728.1\|810580_811657_+\|ISAs1-like-element-ISRm21-family-transposase	gnl\|CDD\|379382	pfam13808, DDE_Tnp_1_assoc, DDE_Tnp_1-associated. This domain is frequently found N-terminal to the transposase, IS family DDE_Tnp_1, pfam01609 and its relatives.	3.41222e-33
NZ_CP021218.1\|WP_014527142.1\|807663_808827_-\|putative-2-aminoethylphosphonate-ABC-transporter-ATP-binding-protein	gnl\|CDD\|274496	TIGR03265, PhnT2, putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely. [Transport and binding proteins, Amino acids, peptides and amines].	0
NZ_CP021218.1\|WP_014527144.1\|811821_813279_-\|phosphonoacetaldehyde-dehydrogenase	gnl\|CDD\|132294	TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase. This family of genes are members of the pfam00171 NAD-dependent aldehyde dehydrogenase family. These genes are observed in Ralstonia eutropha JMP134, Sinorhizobium meliloti 1021, Burkholderia mallei ATCC 23344, Burkholderia thailandensis E264, Burkholderia cenocepacia AU 1054, Burkholderia pseudomallei K96243 and 1710b, Burkholderia xenovorans LB400, Burkholderia sp. 383 and Polaromonas sp. JS666 in close proximity to the PhnW gene (TIGR02326) encoding 2-aminoethyl phosphonate aminotransferase (which generates phosphonoacetaldehyde) and PhnA (TIGR02335) encoding phosphonoacetate hydrolase (not to be confused with the alkylphosphonate utilization operon protein PhnA modeled by TIGR00686). Additionally, transporters believed to be specific for 2-aminoethyl phosphonate are often present. PhnW is, in other organisms, coupled with PhnX (TIGR01422) for the degradation of phosphonoacetaldehyde (GenProp0238), but PhnX is apparently absent in each of the organisms containing this aldehyde reductase. PhnA, characterized in a strain of Pseudomonas fluorescens that has not het been genome sequenced, is only rarely found outside of the PhnW and aldehyde dehydrogenase context. For instance in Rhodopseudomonas and Bordetella bronchiseptica, where it is adjacent to transporters presumably specific for the import of phosphonoacetate. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme.	0
NZ_CP021218.1\|WP_010975822.1\|813275_814550_-\|phosphonoacetate-hydrolase	gnl\|CDD\|131388	TIGR02335, phosphonoacetate_hydrolase, phosphonoacetate hydrolase. This family consists of examples of phosphonoacetate hydrolase, an enzyme specific for the cleavage of the C-P bond in phosphonoacetate. Phosphonates are organic compounds with a direct C-P bond that is far less labile that the C-O-P bonds of phosphate attachment sites. Phosphonates may be degraded for phosphorus and energy by broad spectrum C-P lyase encoded by large operon or by specific enzymes for some of the more common phosphonates in nature. This family represents an enzyme from the latter category. It may be found encoded near genes for phosphonate transport and for pther specific phosphonatases.	1.66756e-171
NZ_CP021218.1\|WP_017263486.1\|800697_801480_+\|response-regulator-transcription-factor	gnl\|CDD\|225818	COG3279, LytT, Response regulator of the LytR/AlgR family [Transcription / Signal transduction mechanisms].	1.24305e-66
NZ_CP021218.1\|WP_017268478.1\|799558_800710_+\|histidine-kinase	gnl\|CDD\|225814	COG3275, LytS, Putative regulator of cell autolysis [Signal transduction mechanisms].	1.22141e-170
NZ_CP021218.1\|WP_010975825.1\|808916_809939_-\|putative-2-aminoethylphosphonate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|274494	TIGR03261, phnS2, putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein. This ABC transporter extracellular solute-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely. [Transport and binding proteins, Amino acids, peptides and amines].	0
NZ_CP021218.1\|WP_017268479.1\|805615_807658_-\|putative-2-aminoethylphosphonate-ABC-transporter-permease-subunit	gnl\|CDD\|274495	TIGR03262, PhnU2, putative 2-aminoethylphosphonate ABC transporter, permease protein. [Transport and binding proteins, Amino acids, peptides and amines].	0
NZ_CP021218.1\|WP_017266907.1\|781696_782206_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379237	pfam13523, Acetyltransf_8, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	1.94853e-16
NZ_CP021218.1\|WP_010975834.1\|791335_792253_-\|sulfurtransferase	gnl\|CDD\|225450	COG2897, SseA, Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism].	4.53138e-90
NZ_CP021218.1\|WP_010970069.1\|787535_788870_+\|ISNCY-like-element-ISRm17-family-transposase	gnl\|CDD\|225581	COG3039, COG3039, Transposase and inactivated derivatives, IS5 family [DNA replication, recombination, and repair].	3.21849e-41
NZ_CP021218.1\|WP_010970069.1\|782511_783846_+\|ISNCY-like-element-ISRm17-family-transposase	gnl\|CDD\|225581	COG3039, COG3039, Transposase and inactivated derivatives, IS5 family [DNA replication, recombination, and repair].	3.21849e-41
NZ_CP021218.1\|WP_029728006.1\|778670_780452_-\|cation:proton-antiporter	gnl\|CDD\|179625	PRK03659, PRK03659, glutathione-regulated potassium-efflux system protein KefB; Provisional.	6.10598e-170
NZ_CP021218.1\|WP_010970069.1\|784182_785517_+\|ISNCY-like-element-ISRm17-family-transposase	gnl\|CDD\|225581	COG3039, COG3039, Transposase and inactivated derivatives, IS5 family [DNA replication, recombination, and repair].	3.21849e-41
NZ_CP021218.1\|WP_029728130.1\|802092_805431_-\|pre-peptidase-C-terminal-domain-containing-protein	gnl\|CDD\|225483	COG2931, COG2931, RTX toxins and related Ca2+-binding proteins [Secondary metabolites biosynthesis, transport, and catabolism].	1.63855e-24
NZ_CP021218.1\|WP_010970069.1\|785864_787199_+\|ISNCY-like-element-ISRm17-family-transposase	gnl\|CDD\|225581	COG3039, COG3039, Transposase and inactivated derivatives, IS5 family [DNA replication, recombination, and repair].	3.21849e-41
NZ_CP021218.1\|WP_017271875.1\|790014_791256_-\|YeeE/YedE-family-protein	gnl\|CDD\|377230	pfam04143, Sulf_transp, Sulphur transport. This is an integral membrane protein. It is predicted to have a function in the transport of sulphur-containing molecules. It contains several conserved glycines and an invariant cysteine that is probably an important functional residue.	4.40021e-67

>NZ_CP021218.1|WP_010975834.1|791335_792253_-|sulfurtransferase
MKMRIASLAFTLSVLASSALAADISPLVDAEWVKANAGDKDVVILDIRDKVAETELGDKPYIQGAVVAPYASAGWRTEVGGVPGMLPPLEQITKLIGDLGIDNDDHVVIVPWGTDSTEFGGATRVYWTFKYLGHEEVSILDGGWRQYDAAGGTRSAEAVKPEPATFHAEPQEKLLATTEEVAAALKAGVKLIDGRPAEQHQGKSKSPVVRANGTIPGSINIEHSKLYSQDHALFARPETVKALTEAAGLAAEEENITFCNTGHWASVTWFALSEVLGNKNTTMYDGSMAEWTADPARPVENKSGT
>NZ_CP021218.1|WP_017271875.1|790014_791256_-|YeeE/YedE-family-protein
MPHRRRDFEMTDISFDRSRYLPSAVVDRGPALVAGGALLIGLLVIAQLIDLRQAALFVVGGLLGVALYHGSFGFTGGWRRMVVERRGRGIRAQMLMIGVAALAMIPLISAGSLGGQPLVGALAPVGVSVLVGAAMFGLGMQLGGGCGSGTLFTVGGGSARMLVTLTFFIVGALIGSAHLPWWLTLPSFGTIDLGRQLGTGTAILATLAGLGLVALATALIERRAHGNIEREPEPSRPGWTWLLYGPWPLVGAGLLMALLNVATLLLAGHPWSVTFGFGLWGAKAAQAVGVPVATWEFWNWPGPQAALSASVLADVTSVMNFGIVLGAAAAASLAGKFAPKAKIPLGSMLAAVVGGLLMGYGARLSFGCNIGALFSGIASGSLHGWLWFATAFVGSFVGIWMRPLFGLDGFKKK
>NZ_CP021218.1|WP_015008257.1|789063_789651_-|hypothetical-protein
MAEEAVELARREIAYCETLLAKGGLNVLSETFRDTAEIKAWDHYPTGDVFDPTSGAQWFYHCHPAEEGAEEHGHFHCFLRPQGPQGPIHHLAAVGVDAHGRLLRLFTVNQWVVGDDWLGAEGTIALLPRFDVQMPRPSYLVNRWLTAIFTAYEQQITELIRERDRTLLAHRQPESVEARQDRALEVTSEFKLSGR
>NZ_CP021218.1|WP_010970069.1|787535_788870_+|ISNCY-like-element-ISRm17-family-transposase
MRQERTVQGSIFDLFAEHEIGRELEAMSQWLDAHRDLLNLVTSDLRRQGVTETGRQGLPSEAVLRCALLKQYRQLSYEELAFHLEDSASFRAFARLPWGWSPKKSVLHKTISAIRADTWEAVNKMLLASARQERLESGRVVRVDSTVTAALIHEPSDSSLLWDCVRVMVRLLQQADSLGSTIPWHDHCRAAKKRARVIEYTRGRPKRVQHYRALLRIARNTLDYLQQAAAQLPLAAGPAGKLWQAQVRHYQPLITQIIAQTERRVLAGEAVPAGEKLVSLFEPHADIIVKGSRDVDYGHKLNLTTGRSGLILDLVIEAGNPADSERLLPLLERHIAFYGEAPRQAAADGGYASRENLRQAKAWGVRDMAFHKKSGLRIEDMVRSRWVYRKLRNFRAGIEAGISCLKRTYGLARCTWRGLDHFKTYVWSSVVAYNLALFARLRPT
>NZ_CP021218.1|WP_010970069.1|785864_787199_+|ISNCY-like-element-ISRm17-family-transposase
MRQERTVQGSIFDLFAEHEIGRELEAMSQWLDAHRDLLNLVTSDLRRQGVTETGRQGLPSEAVLRCALLKQYRQLSYEELAFHLEDSASFRAFARLPWGWSPKKSVLHKTISAIRADTWEAVNKMLLASARQERLESGRVVRVDSTVTAALIHEPSDSSLLWDCVRVMVRLLQQADSLGSTIPWHDHCRAAKKRARVIEYTRGRPKRVQHYRALLRIARNTLDYLQQAAAQLPLAAGPAGKLWQAQVRHYQPLITQIIAQTERRVLAGEAVPAGEKLVSLFEPHADIIVKGSRDVDYGHKLNLTTGRSGLILDLVIEAGNPADSERLLPLLERHIAFYGEAPRQAAADGGYASRENLRQAKAWGVRDMAFHKKSGLRIEDMVRSRWVYRKLRNFRAGIEAGISCLKRTYGLARCTWRGLDHFKTYVWSSVVAYNLALFARLRPT
>NZ_CP021218.1|WP_010970069.1|784182_785517_+|ISNCY-like-element-ISRm17-family-transposase
MRQERTVQGSIFDLFAEHEIGRELEAMSQWLDAHRDLLNLVTSDLRRQGVTETGRQGLPSEAVLRCALLKQYRQLSYEELAFHLEDSASFRAFARLPWGWSPKKSVLHKTISAIRADTWEAVNKMLLASARQERLESGRVVRVDSTVTAALIHEPSDSSLLWDCVRVMVRLLQQADSLGSTIPWHDHCRAAKKRARVIEYTRGRPKRVQHYRALLRIARNTLDYLQQAAAQLPLAAGPAGKLWQAQVRHYQPLITQIIAQTERRVLAGEAVPAGEKLVSLFEPHADIIVKGSRDVDYGHKLNLTTGRSGLILDLVIEAGNPADSERLLPLLERHIAFYGEAPRQAAADGGYASRENLRQAKAWGVRDMAFHKKSGLRIEDMVRSRWVYRKLRNFRAGIEAGISCLKRTYGLARCTWRGLDHFKTYVWSSVVAYNLALFARLRPT
>NZ_CP021218.1|WP_010970069.1|782511_783846_+|ISNCY-like-element-ISRm17-family-transposase
MRQERTVQGSIFDLFAEHEIGRELEAMSQWLDAHRDLLNLVTSDLRRQGVTETGRQGLPSEAVLRCALLKQYRQLSYEELAFHLEDSASFRAFARLPWGWSPKKSVLHKTISAIRADTWEAVNKMLLASARQERLESGRVVRVDSTVTAALIHEPSDSSLLWDCVRVMVRLLQQADSLGSTIPWHDHCRAAKKRARVIEYTRGRPKRVQHYRALLRIARNTLDYLQQAAAQLPLAAGPAGKLWQAQVRHYQPLITQIIAQTERRVLAGEAVPAGEKLVSLFEPHADIIVKGSRDVDYGHKLNLTTGRSGLILDLVIEAGNPADSERLLPLLERHIAFYGEAPRQAAADGGYASRENLRQAKAWGVRDMAFHKKSGLRIEDMVRSRWVYRKLRNFRAGIEAGISCLKRTYGLARCTWRGLDHFKTYVWSSVVAYNLALFARLRPT
>NZ_CP021218.1|WP_017266907.1|781696_782206_-|GNAT-family-N-acetyltransferase
MIEFRSLTEADFLMLCEWLNSPHMRAHYQKTPITIEEVQGKYSERLSPSHPTHCHIARYNGEPFGMLQCYSLRNYPDFASEIGEQDGVAVDLFIGEERFIGKGFGKAMLRSYVLNVVPSIFPQDCKCFICHAKENKIAIRGSLSAGFLPYRDVIERGVESLLLSFDRPI
>NZ_CP021218.1|WP_033043755.1|781068_781542_+|hypothetical-protein
MYTLKPGIKKDPVRRWALPDRVFFGNGACAILAGVFLSEAPLPGFYAERIIPGEGFAGNHIFVTDGVIAFDHHGYSLRSRLLTYHTNGWAGRSPEGWNCRLERVTFDLLDRRDLNDNQMLGREQYLHDPIVRAKTYLGRVNHAEASARARAKNGAAI
>NZ_CP021218.1|WP_029728006.1|778670_780452_-|cation:proton-antiporter
MAAESHGIDLLPVIALLGAAVVAAPLFKRIGLGSVLGYLAAGIAIGPFGLRLLQEPSSILHVAELGVVMFLFIIGLEMRPSRLWGLRREIFGLGIVQVALCALLLTGVGVLTGFPVAPSFVAGAGFVLTSTAIVMQLLEERREMAAPKGQRIVSILLVEDMAIVPLLALVAFLAPIVPGSVAASGAIDWLSIAIGLVTIAGLVLAGRYLLNPLFGLIAGVEAREVMTAAALMVVLGSAYVMQLGGLSMAMGAFLAGVLLSESTFRHQLEADVEPFRGILLGLFFLAVGMSLDLGVIARNWAMILFYVAAYMVVKAIVIYLVARLFRASNWEAIERAVFMAQGGEFAFVLYAAALGTGIISSEENAILTAIIIVSMMVTPLLIAALRLVERNIPLSTDGVERPENLSGNVLIIGFGRVGQIVSQVLLTRGHVISIIDTDVEMINTAREFDFKVYYGDGKRLDILHAAGAERASAIVVCVDKADDATKIVELIKAEFPLIPVLARASDRRHALDLITAGADFHIRETFESSLVLGQKALEALGADLPEVAEIIEKVRQRDEKRLELELVGGLYAGRPLFSGKLEPVEAMPPGGSA
>NZ_CP021218.1|WP_017268478.1|799558_800710_+|histidine-kinase
MVVIAEPDLRPDLSGSHIADPSYRRSRTKRKFNGSGTVLVGALGSFWRAQTAGWLFGALFAVVSRILAFEDVAFAFALTAVLEPLGFALTTLAYRIFRHRIGGVTLTVVAVALALSIAGGVLQMLIANAMKDVLQPNIDPDYGANGSVIPAIYYTLIFLGWSLAYLWIKADADARKQRMRRHRAREEALRAELHQLRLQLDSHFLFNVLNTVAMEIPEEPDTALEMIHRITAYLRYLLENQTRRICPLSDEIEAMMAYIRIQELRFEGRLDCVVEVDPAARPVAVPHLILQPLVENAVKHGLRSPASRFAVGITVECRDADLFIEISNPGRLEAGERDRPPIGLANIRRRLELHYPLGHALTLIQAGDKVIARLMLRGAACFA
>NZ_CP021218.1|WP_017263486.1|800697_801480_+|response-regulator-transcription-factor
MLRVMVVDDEPPARRGLKRLMQAHPDVEVVGEAGSLDQAHQLTHALRPDAIFLDIDLGDDDGFGLIKRLDQVPAIVFVTGHGTYAPQAFDVAALDFLLKPVERQRLALTLERLRRYRHALELGEKVLDDTTTVPPVAMPGRRRLHIRMAGQTLVLPTDGIAMLAAEADFTRIVMADARDHLVCRLLGQFDAELPTPPFFRVSRSLIINLDRVVRVRSQDKGRSLLSLGRSLTPIMLGRVATTRLRRALDGFQRVGTVPDG
>NZ_CP021218.1|WP_017263485.1|801568_801967_-|hypothetical-protein
MKRPTDRRTVLMTAGAAAVAAVAGPVAAQSPDIRGAVTFEGGAVPEGHLEIYLEDPAIQDEARRRATETRIKSDGTSTSIAFSLSPPVRVNASPTLRIVARLERADGWLVARGSTRFEAGSPVYVTLNPVMY
>NZ_CP021218.1|WP_029728130.1|802092_805431_-|pre-peptidase-C-terminal-domain-containing-protein
MPNPSQTSDNWWINDQTPDNPYGKSEDYESFLDYLGALPRSLTPEMAAGTLRINVYELNDHPEYKAAAIGALQMWASVTPLKFEIVDDTPFDSTTDWMEVVSPELGEEDDGSAYSSNRYVSIGQRFHDTEPNKTDIGGYVFDSFIHEFGHEFGLNHPGLYNYSGPGGVQINYLNNATWTYDRQQYSVMSYFDGIDVGETSRWSASTPLMADIEAVIRRFFSTVDENGVRTYQHIDLNTGDNVYGFGSTQYGYQLTSSGMQHDIGFAIHDTGGVDTIDFSGSTAGTILDLRAGQFSSVNGHSNNVSIFAGHNADAVDYYIETGIGSRFDDILIGNDGANTLDGRSGGDRMAGNGGDDTYFVDSLEDIVREEANGGNDTVILLSRNLKIRKIANVENIIYADESTTQPGGGGASPPSAGDNTMTSIIFGGNGNDTLDGGAGDDTIFGKGGDDLIIGGRDSLASRDINNTIDVEDLEDQTESDDGNDTLYGGGGNDTILGGQGNDILDGGAGDDVLSGQDGVDIFRGGAGVDTVDFSKESPFQLLVNLATNVASGGTASGDTFHSIENLIGSDDRIDRFIGTSAANHFWGQGGGDYFNGGGGNDILDGGNDGDILYGEAGNDTVIGGAGQDYLDGGSGIDTVVYEGSPDGVTIDLANGTASGGDGDGPVQIVGRGAVIRHDILVGFENAAGSSFDDHLIGNALANELSGGAGDDTLTGGGGADRLNGGAGSDTADYADATSGVRLSLAGGRSGGDTYVSIENLAGSGFGDRLTGNGAANVLTGQGGNDTIDGGRGDDTLLGDFAYQGDAPPRPGMGSGYATLGPDAANNSIAAAFDISNNFSLTSDPDIFDSTTILHTTVNATGNGRGGYYKIDLAAGTVITIDIDGIADPNVHDSWVRLLDSAGNIVAQNDDGGGDPGSTSNRDSSLVFVAQETGTYYILEGSWSPTAPGDGWAEAVPAGSTYELNVSVEFPPRPAQPGVAGSDTLIGGGGSDLLDGGLAADTLTGGAGEDTFRFSTALGNGNVDWIKDFNVIDDTILLDNLIFESVGGEGALALGAFYGSAGGVAHDADDRIIYDADSGVLSYDADGAGEIAAIQYAQLSTNLKLSAADFIII
>NZ_CP021218.1|WP_017268479.1|805615_807658_-|putative-2-aminoethylphosphonate-ABC-transporter-permease-subunit
MTLAVDFLPPGRAVRQQISGDDWLKRAVMLVVGIYLVVALALPLFVMLSKSFSTYTFDLHQFEFQVSDQSGQGWSDPVTAAALNAAVAAFPESDLKASADGRLQAAKLFPDFSFRSPVRYRIRGTSDETHFLAGSQLVRGTEWQEYDSNNFRRVMLRPSRSIGLSNFAEYFSTPSLVRSIKNSVTMALISTAVTLVVAFGLAYALNRSRMPGKGLFKLIVTIPILVPSLLPGIALVYLFGNQGVFRDLLLGHSIYGPLGIVVGSVFFTLPHAFLIISTALWVADARHYEAATSLRASKWRTFWTVTVPGARYGLISAAFVVFTLVITDFGLPKVIGGQYGMLAVDIYKQVIGQQNFEMGAVVSVILLVPAFLAFAVDRLTQRRQVALLSARAVPYEPKPRRGFDAASFAFCTLVAVFVLGMIGMCQVAALVKFWPYDLSLSLRNYAFDLMDGGGWDSYYNSIRLALMTAVIGSLIVFTGAYMVEKTKGFGLGRATFHMLAMLPMAVPGMVLGLAYIFFFNSAANPLHGIYGTMTILVLCTVTHFYTVAHLTALTALKQLDPEFEAVAGSLKIPFYKLFFRVTLPVCLPAVLEIAIYLFVNAMTTVSAVVFLYATDTKLASVAILNMDDAGDIAPAAAMGMMIFYTNVAAKLLHAFVSRLLLARTQGWRRVSQSAAATVPH
>NZ_CP021218.1|WP_014527142.1|807663_808827_-|putative-2-aminoethylphosphonate-ABC-transporter-ATP-binding-protein
MKHATAPAEPAMPASATRQIEGRPFLEIDGLWKAYGDFVALRDIDLQVKEGEFICFLGPSGCGKTTLLRAIAGLDIQSRGTICQGGQDISRLPPAQRDYGIVFQSYALFPNLTIEKNIAFGLENIGRPRREIASRVSELLELVGLSSQGRKYPAQLSGGQQQRVALARAMAISPGLLLLDEPLSALDAKVRVHLRHEIKELQRKLGVTTIMVTHDQEEALAMADRIVVMNQGGIEQVGTPTEIYRHPKTLFVADFIGETNQFPATVGKGAQVEIGHTRFACAEHRLPSGASVVAAVRPADIIPHGAAAHRATGLDAVGNADNLIDAHVEDMEFLGMFWRTRLSAPRLKEKALVADFSTNAVRRLSIEIGSAIQVEIPQERLLLFAKA
>NZ_CP021218.1|WP_010975825.1|808916_809939_-|putative-2-aminoethylphosphonate-ABC-transporter-substrate-binding-protein
MPFSKIFLGAGTALILASSAAYAETELTVYTSIEAVDLDRYKETFEKAHPDIKINWVRDSTGVMTAKLLAEKDNPQADVVWGVAATSLLLLKSEGMLEPYSPKNVEALDPRFVDGDKPPSWVGMDAYVAALCYNTVEAGKLGLTPPTSWKDLTKPEYKGHVVMPNPNSSGTGFLDVSAWLQTFGEEEAWSFMDALHENIAAYTHSGSKPCKMAASGETVIGVSFEFPGAKAKTSGAPIDIIFPSEGSGWEAEATAIIAGTANLEAAKTLVDWSISKEANEMYNVGYAVVAYPGVAKPIENLPDDVADKMIKNDFEWAANNRARILKEWQKRYDAKSEPKS
>NZ_CP021218.1|WP_010969728.1|810580_811657_+|ISAs1-like-element-ISRm21-family-transposase
MSRFAACFEDLPDPRGRNARHPLTSILFIAVAAIVCGAESCTDMADFGVAKKKWLKTIVPLPYGIPSHDTFSTVFRHLDPDAFDAAFRRLTASFAQGLEGVVAIDGKAVRGAYRRAAKATPLHFVNVWAAGPGLVIGQKLAPGRNEVQGALDALALLALEGSIVTADALHCRPDTARAILAAGGDYALALKANQPGLLAQALARIEDADHVESIQIAAETAHDRTETRRASVVAVDDINFPGLQAIGCVETTSRHTNGHLTSHVRYFLLSTTMSPSALIEVVRTHWQIENKLHWVLDVHFREDAARNRKDNGPQNIAFLRKIALNLLRSHPDKASIRRKIKKAGWDDQFLTSLIAHMR
>NZ_CP021218.1|WP_014527144.1|811821_813279_-|phosphonoacetaldehyde-dehydrogenase
MTKAEVIIAVRHEPMRIAGRLVDTDDRVEVRYPWNDTVVGTVPAGRAEHAREAFAIAAAYQPKLTRYERQKILLATAEALAARKEEISDVITLELGISKADSLYEVGRAFDVFTLAGQMCIRDDGEIFSCDLTPHGKARKIFTMREPLTAISAITPFNHPLNMVAHKVAPAIATNNCVVVKPTELTPMTALLLADILYEAGLPPEMLSVVTGWPADIGMEMITNPHVDLVTFTGSVPVGKLIAANAHYKRQVLELGGNDPLIILNDLSDDDLARAADLAVAGATKNSGQRCTAVKRILCQESVADRFVPLVLERAKRLRFGDPMDRSTDLGTVIHEKAAALFEERVMRAAEEGADILYHPGRSGALLPPIVVDRVPHQSDLVLEETFGPIIPIVRVPDDDDATITLSNSTAFGLSSGVCTNDYRRMQKYIAGLKVGTVNIWEVPGYRIEMSPFGGIKDSGNGYKEGVIEAMKSFTNVKTFSLPWP
>NZ_CP021218.1|WP_010975822.1|813275_814550_-|phosphonoacetate-hydrolase
MNQMSKISVTVNGRRYPWPRVPAIAVCLDGCEPAYLDAAIDAGLMPALKRIKERGAVRLAHSVIPSFTNPNNLSIATGSPPAVHGICGNYLYEPSTGEEVMMNDPKFLRAPTIFQAFYDAGARVAVVTAKDKLRALLGKGLRFDEGRAVCFSSEKSDKATRAEHGIDNASAWLGRPVPEVYSAALSEFVFAAGVKLLREFRPDIMYLTTTDYVQHKYAPGVPEANSFYEMFDRYLAELDGLGAAIVVTADHGMKPKHKADGSPDVIYVQDLLDEWLGKDAARVILPITDPYVVHHGALGSFATAYLPDGCDRSEIMARLKAIQGVDVVLGREEACRRFELPEDRIGDIVLVSSENKTLGTSEHRHDLAALDEPLRSHGGLTEQEVPFIVNRVLPELPNAPRLRNFDAFFYAVTAAAEAGAEGGL

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Crispr_ID: NZ_CP021218_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP021218_3

795216-795335

Orphan

Consensus_repeat	Method
TGCCGCCCGCACCGCCGCTGCCGCCGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP021218_3

>merge|NZ_CP021218|3|795216-795335|CRISPRCasFinder
TGCCGACCGCGCCGCCATTGCCGCCCGCACCGCCGCTGCCGCCGACACCGACGGTGATGTTGGCCGTCGCCTGGCTGCCGGACGCGGTGGAGGTGCCGCCCGCACCGCCGCCGCCGCCGA

>NZ_CP021218|3|3|795216-795335|CRISPRCasFinder
TGCCGACCGCGCCGCCATTGCCGCCCG	CACCGCCGCTGCCGCCGACACCGACGGTGATGTTGGCCGTCGCCTGGCTGCCGGACGCGGTGGAGG
TGCCGCCCGCACCGCCGCCGCCGCCGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP021218.1\|WP_015008257.1\|789063_789651_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021218.1\|WP_014527142.1\|807663_808827_-\|putative-2-aminoethylphosphonate-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|274496
NZ_CP021218.1\|WP_014527144.1\|811821_813279_-\|phosphonoacetaldehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|132294
NZ_CP021218.1\|WP_010975822.1\|813275_814550_-\|phosphonoacetate-hydrolase	unknown	unknown	gnl\|CDD\|131388
NZ_CP021218.1\|WP_017263486.1\|800697_801480_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225818
NZ_CP021218.1\|WP_010969728.1\|810580_811657_+\|ISAs1-like-element-ISRm21-family-transposase	unknown	unknown	gnl\|CDD\|379382
NZ_CP021218.1\|WP_017268478.1\|799558_800710_+\|histidine-kinase	unknown	unknown	gnl\|CDD\|225814
NZ_CP021218.1\|WP_010975825.1\|808916_809939_-\|putative-2-aminoethylphosphonate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|274494
NZ_CP021218.1\|WP_017268479.1\|805615_807658_-\|putative-2-aminoethylphosphonate-ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|274495
NZ_CP021218.1\|WP_017266907.1\|781696_782206_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379237
NZ_CP021218.1\|WP_010975834.1\|791335_792253_-\|sulfurtransferase	unknown	unknown	gnl\|CDD\|225450
NZ_CP021218.1\|WP_017263485.1\|801568_801967_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021218.1\|WP_010970069.1\|787535_788870_+\|ISNCY-like-element-ISRm17-family-transposase	unknown	unknown	gnl\|CDD\|225581
NZ_CP021218.1\|WP_010970069.1\|782511_783846_+\|ISNCY-like-element-ISRm17-family-transposase	unknown	unknown	gnl\|CDD\|225581
NZ_CP021218.1\|WP_029728006.1\|778670_780452_-\|cation:proton-antiporter	unknown	unknown	gnl\|CDD\|179625
NZ_CP021218.1\|WP_010970069.1\|784182_785517_+\|ISNCY-like-element-ISRm17-family-transposase	unknown	unknown	gnl\|CDD\|225581
NZ_CP021218.1\|WP_029728130.1\|802092_805431_-\|pre-peptidase-C-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|225483
NZ_CP021218.1\|WP_010970069.1\|785864_787199_+\|ISNCY-like-element-ISRm17-family-transposase	unknown	unknown	gnl\|CDD\|225581
NZ_CP021218.1\|WP_017271875.1\|790014_791256_-\|YeeE/YedE-family-protein	unknown	unknown	gnl\|CDD\|377230
NZ_CP021218.1\|WP_033043755.1\|781068_781542_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP021218.1\|WP_010969728.1\|810580_811657_+\|ISAs1-like-element-ISRm21-family-transposase	gnl\|CDD\|379382	pfam13808, DDE_Tnp_1_assoc, DDE_Tnp_1-associated. This domain is frequently found N-terminal to the transposase, IS family DDE_Tnp_1, pfam01609 and its relatives.	3.41222e-33
NZ_CP021218.1\|WP_014527142.1\|807663_808827_-\|putative-2-aminoethylphosphonate-ABC-transporter-ATP-binding-protein	gnl\|CDD\|274496	TIGR03265, PhnT2, putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely. [Transport and binding proteins, Amino acids, peptides and amines].	0
NZ_CP021218.1\|WP_014527144.1\|811821_813279_-\|phosphonoacetaldehyde-dehydrogenase	gnl\|CDD\|132294	TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase. This family of genes are members of the pfam00171 NAD-dependent aldehyde dehydrogenase family. These genes are observed in Ralstonia eutropha JMP134, Sinorhizobium meliloti 1021, Burkholderia mallei ATCC 23344, Burkholderia thailandensis E264, Burkholderia cenocepacia AU 1054, Burkholderia pseudomallei K96243 and 1710b, Burkholderia xenovorans LB400, Burkholderia sp. 383 and Polaromonas sp. JS666 in close proximity to the PhnW gene (TIGR02326) encoding 2-aminoethyl phosphonate aminotransferase (which generates phosphonoacetaldehyde) and PhnA (TIGR02335) encoding phosphonoacetate hydrolase (not to be confused with the alkylphosphonate utilization operon protein PhnA modeled by TIGR00686). Additionally, transporters believed to be specific for 2-aminoethyl phosphonate are often present. PhnW is, in other organisms, coupled with PhnX (TIGR01422) for the degradation of phosphonoacetaldehyde (GenProp0238), but PhnX is apparently absent in each of the organisms containing this aldehyde reductase. PhnA, characterized in a strain of Pseudomonas fluorescens that has not het been genome sequenced, is only rarely found outside of the PhnW and aldehyde dehydrogenase context. For instance in Rhodopseudomonas and Bordetella bronchiseptica, where it is adjacent to transporters presumably specific for the import of phosphonoacetate. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme.	0
NZ_CP021218.1\|WP_010975822.1\|813275_814550_-\|phosphonoacetate-hydrolase	gnl\|CDD\|131388	TIGR02335, phosphonoacetate_hydrolase, phosphonoacetate hydrolase. This family consists of examples of phosphonoacetate hydrolase, an enzyme specific for the cleavage of the C-P bond in phosphonoacetate. Phosphonates are organic compounds with a direct C-P bond that is far less labile that the C-O-P bonds of phosphate attachment sites. Phosphonates may be degraded for phosphorus and energy by broad spectrum C-P lyase encoded by large operon or by specific enzymes for some of the more common phosphonates in nature. This family represents an enzyme from the latter category. It may be found encoded near genes for phosphonate transport and for pther specific phosphonatases.	1.66756e-171
NZ_CP021218.1\|WP_017263486.1\|800697_801480_+\|response-regulator-transcription-factor	gnl\|CDD\|225818	COG3279, LytT, Response regulator of the LytR/AlgR family [Transcription / Signal transduction mechanisms].	1.24305e-66
NZ_CP021218.1\|WP_017268478.1\|799558_800710_+\|histidine-kinase	gnl\|CDD\|225814	COG3275, LytS, Putative regulator of cell autolysis [Signal transduction mechanisms].	1.22141e-170
NZ_CP021218.1\|WP_010975825.1\|808916_809939_-\|putative-2-aminoethylphosphonate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|274494	TIGR03261, phnS2, putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein. This ABC transporter extracellular solute-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely. [Transport and binding proteins, Amino acids, peptides and amines].	0
NZ_CP021218.1\|WP_017268479.1\|805615_807658_-\|putative-2-aminoethylphosphonate-ABC-transporter-permease-subunit	gnl\|CDD\|274495	TIGR03262, PhnU2, putative 2-aminoethylphosphonate ABC transporter, permease protein. [Transport and binding proteins, Amino acids, peptides and amines].	0
NZ_CP021218.1\|WP_017266907.1\|781696_782206_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379237	pfam13523, Acetyltransf_8, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	1.94853e-16
NZ_CP021218.1\|WP_010975834.1\|791335_792253_-\|sulfurtransferase	gnl\|CDD\|225450	COG2897, SseA, Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism].	4.53138e-90
NZ_CP021218.1\|WP_010970069.1\|787535_788870_+\|ISNCY-like-element-ISRm17-family-transposase	gnl\|CDD\|225581	COG3039, COG3039, Transposase and inactivated derivatives, IS5 family [DNA replication, recombination, and repair].	3.21849e-41
NZ_CP021218.1\|WP_010970069.1\|782511_783846_+\|ISNCY-like-element-ISRm17-family-transposase	gnl\|CDD\|225581	COG3039, COG3039, Transposase and inactivated derivatives, IS5 family [DNA replication, recombination, and repair].	3.21849e-41
NZ_CP021218.1\|WP_029728006.1\|778670_780452_-\|cation:proton-antiporter	gnl\|CDD\|179625	PRK03659, PRK03659, glutathione-regulated potassium-efflux system protein KefB; Provisional.	6.10598e-170
NZ_CP021218.1\|WP_010970069.1\|784182_785517_+\|ISNCY-like-element-ISRm17-family-transposase	gnl\|CDD\|225581	COG3039, COG3039, Transposase and inactivated derivatives, IS5 family [DNA replication, recombination, and repair].	3.21849e-41
NZ_CP021218.1\|WP_029728130.1\|802092_805431_-\|pre-peptidase-C-terminal-domain-containing-protein	gnl\|CDD\|225483	COG2931, COG2931, RTX toxins and related Ca2+-binding proteins [Secondary metabolites biosynthesis, transport, and catabolism].	1.63855e-24
NZ_CP021218.1\|WP_010970069.1\|785864_787199_+\|ISNCY-like-element-ISRm17-family-transposase	gnl\|CDD\|225581	COG3039, COG3039, Transposase and inactivated derivatives, IS5 family [DNA replication, recombination, and repair].	3.21849e-41
NZ_CP021218.1\|WP_017271875.1\|790014_791256_-\|YeeE/YedE-family-protein	gnl\|CDD\|377230	pfam04143, Sulf_transp, Sulphur transport. This is an integral membrane protein. It is predicted to have a function in the transport of sulphur-containing molecules. It contains several conserved glycines and an invariant cysteine that is probably an important functional residue.	4.40021e-67

>NZ_CP021218.1|WP_010975834.1|791335_792253_-|sulfurtransferase
MKMRIASLAFTLSVLASSALAADISPLVDAEWVKANAGDKDVVILDIRDKVAETELGDKPYIQGAVVAPYASAGWRTEVGGVPGMLPPLEQITKLIGDLGIDNDDHVVIVPWGTDSTEFGGATRVYWTFKYLGHEEVSILDGGWRQYDAAGGTRSAEAVKPEPATFHAEPQEKLLATTEEVAAALKAGVKLIDGRPAEQHQGKSKSPVVRANGTIPGSINIEHSKLYSQDHALFARPETVKALTEAAGLAAEEENITFCNTGHWASVTWFALSEVLGNKNTTMYDGSMAEWTADPARPVENKSGT
>NZ_CP021218.1|WP_017271875.1|790014_791256_-|YeeE/YedE-family-protein
MPHRRRDFEMTDISFDRSRYLPSAVVDRGPALVAGGALLIGLLVIAQLIDLRQAALFVVGGLLGVALYHGSFGFTGGWRRMVVERRGRGIRAQMLMIGVAALAMIPLISAGSLGGQPLVGALAPVGVSVLVGAAMFGLGMQLGGGCGSGTLFTVGGGSARMLVTLTFFIVGALIGSAHLPWWLTLPSFGTIDLGRQLGTGTAILATLAGLGLVALATALIERRAHGNIEREPEPSRPGWTWLLYGPWPLVGAGLLMALLNVATLLLAGHPWSVTFGFGLWGAKAAQAVGVPVATWEFWNWPGPQAALSASVLADVTSVMNFGIVLGAAAAASLAGKFAPKAKIPLGSMLAAVVGGLLMGYGARLSFGCNIGALFSGIASGSLHGWLWFATAFVGSFVGIWMRPLFGLDGFKKK
>NZ_CP021218.1|WP_015008257.1|789063_789651_-|hypothetical-protein
MAEEAVELARREIAYCETLLAKGGLNVLSETFRDTAEIKAWDHYPTGDVFDPTSGAQWFYHCHPAEEGAEEHGHFHCFLRPQGPQGPIHHLAAVGVDAHGRLLRLFTVNQWVVGDDWLGAEGTIALLPRFDVQMPRPSYLVNRWLTAIFTAYEQQITELIRERDRTLLAHRQPESVEARQDRALEVTSEFKLSGR
>NZ_CP021218.1|WP_010970069.1|787535_788870_+|ISNCY-like-element-ISRm17-family-transposase
MRQERTVQGSIFDLFAEHEIGRELEAMSQWLDAHRDLLNLVTSDLRRQGVTETGRQGLPSEAVLRCALLKQYRQLSYEELAFHLEDSASFRAFARLPWGWSPKKSVLHKTISAIRADTWEAVNKMLLASARQERLESGRVVRVDSTVTAALIHEPSDSSLLWDCVRVMVRLLQQADSLGSTIPWHDHCRAAKKRARVIEYTRGRPKRVQHYRALLRIARNTLDYLQQAAAQLPLAAGPAGKLWQAQVRHYQPLITQIIAQTERRVLAGEAVPAGEKLVSLFEPHADIIVKGSRDVDYGHKLNLTTGRSGLILDLVIEAGNPADSERLLPLLERHIAFYGEAPRQAAADGGYASRENLRQAKAWGVRDMAFHKKSGLRIEDMVRSRWVYRKLRNFRAGIEAGISCLKRTYGLARCTWRGLDHFKTYVWSSVVAYNLALFARLRPT
>NZ_CP021218.1|WP_010970069.1|785864_787199_+|ISNCY-like-element-ISRm17-family-transposase
MRQERTVQGSIFDLFAEHEIGRELEAMSQWLDAHRDLLNLVTSDLRRQGVTETGRQGLPSEAVLRCALLKQYRQLSYEELAFHLEDSASFRAFARLPWGWSPKKSVLHKTISAIRADTWEAVNKMLLASARQERLESGRVVRVDSTVTAALIHEPSDSSLLWDCVRVMVRLLQQADSLGSTIPWHDHCRAAKKRARVIEYTRGRPKRVQHYRALLRIARNTLDYLQQAAAQLPLAAGPAGKLWQAQVRHYQPLITQIIAQTERRVLAGEAVPAGEKLVSLFEPHADIIVKGSRDVDYGHKLNLTTGRSGLILDLVIEAGNPADSERLLPLLERHIAFYGEAPRQAAADGGYASRENLRQAKAWGVRDMAFHKKSGLRIEDMVRSRWVYRKLRNFRAGIEAGISCLKRTYGLARCTWRGLDHFKTYVWSSVVAYNLALFARLRPT
>NZ_CP021218.1|WP_010970069.1|784182_785517_+|ISNCY-like-element-ISRm17-family-transposase
MRQERTVQGSIFDLFAEHEIGRELEAMSQWLDAHRDLLNLVTSDLRRQGVTETGRQGLPSEAVLRCALLKQYRQLSYEELAFHLEDSASFRAFARLPWGWSPKKSVLHKTISAIRADTWEAVNKMLLASARQERLESGRVVRVDSTVTAALIHEPSDSSLLWDCVRVMVRLLQQADSLGSTIPWHDHCRAAKKRARVIEYTRGRPKRVQHYRALLRIARNTLDYLQQAAAQLPLAAGPAGKLWQAQVRHYQPLITQIIAQTERRVLAGEAVPAGEKLVSLFEPHADIIVKGSRDVDYGHKLNLTTGRSGLILDLVIEAGNPADSERLLPLLERHIAFYGEAPRQAAADGGYASRENLRQAKAWGVRDMAFHKKSGLRIEDMVRSRWVYRKLRNFRAGIEAGISCLKRTYGLARCTWRGLDHFKTYVWSSVVAYNLALFARLRPT
>NZ_CP021218.1|WP_010970069.1|782511_783846_+|ISNCY-like-element-ISRm17-family-transposase
MRQERTVQGSIFDLFAEHEIGRELEAMSQWLDAHRDLLNLVTSDLRRQGVTETGRQGLPSEAVLRCALLKQYRQLSYEELAFHLEDSASFRAFARLPWGWSPKKSVLHKTISAIRADTWEAVNKMLLASARQERLESGRVVRVDSTVTAALIHEPSDSSLLWDCVRVMVRLLQQADSLGSTIPWHDHCRAAKKRARVIEYTRGRPKRVQHYRALLRIARNTLDYLQQAAAQLPLAAGPAGKLWQAQVRHYQPLITQIIAQTERRVLAGEAVPAGEKLVSLFEPHADIIVKGSRDVDYGHKLNLTTGRSGLILDLVIEAGNPADSERLLPLLERHIAFYGEAPRQAAADGGYASRENLRQAKAWGVRDMAFHKKSGLRIEDMVRSRWVYRKLRNFRAGIEAGISCLKRTYGLARCTWRGLDHFKTYVWSSVVAYNLALFARLRPT
>NZ_CP021218.1|WP_017266907.1|781696_782206_-|GNAT-family-N-acetyltransferase
MIEFRSLTEADFLMLCEWLNSPHMRAHYQKTPITIEEVQGKYSERLSPSHPTHCHIARYNGEPFGMLQCYSLRNYPDFASEIGEQDGVAVDLFIGEERFIGKGFGKAMLRSYVLNVVPSIFPQDCKCFICHAKENKIAIRGSLSAGFLPYRDVIERGVESLLLSFDRPI
>NZ_CP021218.1|WP_033043755.1|781068_781542_+|hypothetical-protein
MYTLKPGIKKDPVRRWALPDRVFFGNGACAILAGVFLSEAPLPGFYAERIIPGEGFAGNHIFVTDGVIAFDHHGYSLRSRLLTYHTNGWAGRSPEGWNCRLERVTFDLLDRRDLNDNQMLGREQYLHDPIVRAKTYLGRVNHAEASARARAKNGAAI
>NZ_CP021218.1|WP_029728006.1|778670_780452_-|cation:proton-antiporter
MAAESHGIDLLPVIALLGAAVVAAPLFKRIGLGSVLGYLAAGIAIGPFGLRLLQEPSSILHVAELGVVMFLFIIGLEMRPSRLWGLRREIFGLGIVQVALCALLLTGVGVLTGFPVAPSFVAGAGFVLTSTAIVMQLLEERREMAAPKGQRIVSILLVEDMAIVPLLALVAFLAPIVPGSVAASGAIDWLSIAIGLVTIAGLVLAGRYLLNPLFGLIAGVEAREVMTAAALMVVLGSAYVMQLGGLSMAMGAFLAGVLLSESTFRHQLEADVEPFRGILLGLFFLAVGMSLDLGVIARNWAMILFYVAAYMVVKAIVIYLVARLFRASNWEAIERAVFMAQGGEFAFVLYAAALGTGIISSEENAILTAIIIVSMMVTPLLIAALRLVERNIPLSTDGVERPENLSGNVLIIGFGRVGQIVSQVLLTRGHVISIIDTDVEMINTAREFDFKVYYGDGKRLDILHAAGAERASAIVVCVDKADDATKIVELIKAEFPLIPVLARASDRRHALDLITAGADFHIRETFESSLVLGQKALEALGADLPEVAEIIEKVRQRDEKRLELELVGGLYAGRPLFSGKLEPVEAMPPGGSA
>NZ_CP021218.1|WP_017268478.1|799558_800710_+|histidine-kinase
MVVIAEPDLRPDLSGSHIADPSYRRSRTKRKFNGSGTVLVGALGSFWRAQTAGWLFGALFAVVSRILAFEDVAFAFALTAVLEPLGFALTTLAYRIFRHRIGGVTLTVVAVALALSIAGGVLQMLIANAMKDVLQPNIDPDYGANGSVIPAIYYTLIFLGWSLAYLWIKADADARKQRMRRHRAREEALRAELHQLRLQLDSHFLFNVLNTVAMEIPEEPDTALEMIHRITAYLRYLLENQTRRICPLSDEIEAMMAYIRIQELRFEGRLDCVVEVDPAARPVAVPHLILQPLVENAVKHGLRSPASRFAVGITVECRDADLFIEISNPGRLEAGERDRPPIGLANIRRRLELHYPLGHALTLIQAGDKVIARLMLRGAACFA
>NZ_CP021218.1|WP_017263486.1|800697_801480_+|response-regulator-transcription-factor
MLRVMVVDDEPPARRGLKRLMQAHPDVEVVGEAGSLDQAHQLTHALRPDAIFLDIDLGDDDGFGLIKRLDQVPAIVFVTGHGTYAPQAFDVAALDFLLKPVERQRLALTLERLRRYRHALELGEKVLDDTTTVPPVAMPGRRRLHIRMAGQTLVLPTDGIAMLAAEADFTRIVMADARDHLVCRLLGQFDAELPTPPFFRVSRSLIINLDRVVRVRSQDKGRSLLSLGRSLTPIMLGRVATTRLRRALDGFQRVGTVPDG
>NZ_CP021218.1|WP_017263485.1|801568_801967_-|hypothetical-protein
MKRPTDRRTVLMTAGAAAVAAVAGPVAAQSPDIRGAVTFEGGAVPEGHLEIYLEDPAIQDEARRRATETRIKSDGTSTSIAFSLSPPVRVNASPTLRIVARLERADGWLVARGSTRFEAGSPVYVTLNPVMY
>NZ_CP021218.1|WP_029728130.1|802092_805431_-|pre-peptidase-C-terminal-domain-containing-protein
MPNPSQTSDNWWINDQTPDNPYGKSEDYESFLDYLGALPRSLTPEMAAGTLRINVYELNDHPEYKAAAIGALQMWASVTPLKFEIVDDTPFDSTTDWMEVVSPELGEEDDGSAYSSNRYVSIGQRFHDTEPNKTDIGGYVFDSFIHEFGHEFGLNHPGLYNYSGPGGVQINYLNNATWTYDRQQYSVMSYFDGIDVGETSRWSASTPLMADIEAVIRRFFSTVDENGVRTYQHIDLNTGDNVYGFGSTQYGYQLTSSGMQHDIGFAIHDTGGVDTIDFSGSTAGTILDLRAGQFSSVNGHSNNVSIFAGHNADAVDYYIETGIGSRFDDILIGNDGANTLDGRSGGDRMAGNGGDDTYFVDSLEDIVREEANGGNDTVILLSRNLKIRKIANVENIIYADESTTQPGGGGASPPSAGDNTMTSIIFGGNGNDTLDGGAGDDTIFGKGGDDLIIGGRDSLASRDINNTIDVEDLEDQTESDDGNDTLYGGGGNDTILGGQGNDILDGGAGDDVLSGQDGVDIFRGGAGVDTVDFSKESPFQLLVNLATNVASGGTASGDTFHSIENLIGSDDRIDRFIGTSAANHFWGQGGGDYFNGGGGNDILDGGNDGDILYGEAGNDTVIGGAGQDYLDGGSGIDTVVYEGSPDGVTIDLANGTASGGDGDGPVQIVGRGAVIRHDILVGFENAAGSSFDDHLIGNALANELSGGAGDDTLTGGGGADRLNGGAGSDTADYADATSGVRLSLAGGRSGGDTYVSIENLAGSGFGDRLTGNGAANVLTGQGGNDTIDGGRGDDTLLGDFAYQGDAPPRPGMGSGYATLGPDAANNSIAAAFDISNNFSLTSDPDIFDSTTILHTTVNATGNGRGGYYKIDLAAGTVITIDIDGIADPNVHDSWVRLLDSAGNIVAQNDDGGGDPGSTSNRDSSLVFVAQETGTYYILEGSWSPTAPGDGWAEAVPAGSTYELNVSVEFPPRPAQPGVAGSDTLIGGGGSDLLDGGLAADTLTGGAGEDTFRFSTALGNGNVDWIKDFNVIDDTILLDNLIFESVGGEGALALGAFYGSAGGVAHDADDRIIYDADSGVLSYDADGAGEIAAIQYAQLSTNLKLSAADFIII
>NZ_CP021218.1|WP_017268479.1|805615_807658_-|putative-2-aminoethylphosphonate-ABC-transporter-permease-subunit
MTLAVDFLPPGRAVRQQISGDDWLKRAVMLVVGIYLVVALALPLFVMLSKSFSTYTFDLHQFEFQVSDQSGQGWSDPVTAAALNAAVAAFPESDLKASADGRLQAAKLFPDFSFRSPVRYRIRGTSDETHFLAGSQLVRGTEWQEYDSNNFRRVMLRPSRSIGLSNFAEYFSTPSLVRSIKNSVTMALISTAVTLVVAFGLAYALNRSRMPGKGLFKLIVTIPILVPSLLPGIALVYLFGNQGVFRDLLLGHSIYGPLGIVVGSVFFTLPHAFLIISTALWVADARHYEAATSLRASKWRTFWTVTVPGARYGLISAAFVVFTLVITDFGLPKVIGGQYGMLAVDIYKQVIGQQNFEMGAVVSVILLVPAFLAFAVDRLTQRRQVALLSARAVPYEPKPRRGFDAASFAFCTLVAVFVLGMIGMCQVAALVKFWPYDLSLSLRNYAFDLMDGGGWDSYYNSIRLALMTAVIGSLIVFTGAYMVEKTKGFGLGRATFHMLAMLPMAVPGMVLGLAYIFFFNSAANPLHGIYGTMTILVLCTVTHFYTVAHLTALTALKQLDPEFEAVAGSLKIPFYKLFFRVTLPVCLPAVLEIAIYLFVNAMTTVSAVVFLYATDTKLASVAILNMDDAGDIAPAAAMGMMIFYTNVAAKLLHAFVSRLLLARTQGWRRVSQSAAATVPH
>NZ_CP021218.1|WP_014527142.1|807663_808827_-|putative-2-aminoethylphosphonate-ABC-transporter-ATP-binding-protein
MKHATAPAEPAMPASATRQIEGRPFLEIDGLWKAYGDFVALRDIDLQVKEGEFICFLGPSGCGKTTLLRAIAGLDIQSRGTICQGGQDISRLPPAQRDYGIVFQSYALFPNLTIEKNIAFGLENIGRPRREIASRVSELLELVGLSSQGRKYPAQLSGGQQQRVALARAMAISPGLLLLDEPLSALDAKVRVHLRHEIKELQRKLGVTTIMVTHDQEEALAMADRIVVMNQGGIEQVGTPTEIYRHPKTLFVADFIGETNQFPATVGKGAQVEIGHTRFACAEHRLPSGASVVAAVRPADIIPHGAAAHRATGLDAVGNADNLIDAHVEDMEFLGMFWRTRLSAPRLKEKALVADFSTNAVRRLSIEIGSAIQVEIPQERLLLFAKA
>NZ_CP021218.1|WP_010975825.1|808916_809939_-|putative-2-aminoethylphosphonate-ABC-transporter-substrate-binding-protein
MPFSKIFLGAGTALILASSAAYAETELTVYTSIEAVDLDRYKETFEKAHPDIKINWVRDSTGVMTAKLLAEKDNPQADVVWGVAATSLLLLKSEGMLEPYSPKNVEALDPRFVDGDKPPSWVGMDAYVAALCYNTVEAGKLGLTPPTSWKDLTKPEYKGHVVMPNPNSSGTGFLDVSAWLQTFGEEEAWSFMDALHENIAAYTHSGSKPCKMAASGETVIGVSFEFPGAKAKTSGAPIDIIFPSEGSGWEAEATAIIAGTANLEAAKTLVDWSISKEANEMYNVGYAVVAYPGVAKPIENLPDDVADKMIKNDFEWAANNRARILKEWQKRYDAKSEPKS
>NZ_CP021218.1|WP_010969728.1|810580_811657_+|ISAs1-like-element-ISRm21-family-transposase
MSRFAACFEDLPDPRGRNARHPLTSILFIAVAAIVCGAESCTDMADFGVAKKKWLKTIVPLPYGIPSHDTFSTVFRHLDPDAFDAAFRRLTASFAQGLEGVVAIDGKAVRGAYRRAAKATPLHFVNVWAAGPGLVIGQKLAPGRNEVQGALDALALLALEGSIVTADALHCRPDTARAILAAGGDYALALKANQPGLLAQALARIEDADHVESIQIAAETAHDRTETRRASVVAVDDINFPGLQAIGCVETTSRHTNGHLTSHVRYFLLSTTMSPSALIEVVRTHWQIENKLHWVLDVHFREDAARNRKDNGPQNIAFLRKIALNLLRSHPDKASIRRKIKKAGWDDQFLTSLIAHMR
>NZ_CP021218.1|WP_014527144.1|811821_813279_-|phosphonoacetaldehyde-dehydrogenase
MTKAEVIIAVRHEPMRIAGRLVDTDDRVEVRYPWNDTVVGTVPAGRAEHAREAFAIAAAYQPKLTRYERQKILLATAEALAARKEEISDVITLELGISKADSLYEVGRAFDVFTLAGQMCIRDDGEIFSCDLTPHGKARKIFTMREPLTAISAITPFNHPLNMVAHKVAPAIATNNCVVVKPTELTPMTALLLADILYEAGLPPEMLSVVTGWPADIGMEMITNPHVDLVTFTGSVPVGKLIAANAHYKRQVLELGGNDPLIILNDLSDDDLARAADLAVAGATKNSGQRCTAVKRILCQESVADRFVPLVLERAKRLRFGDPMDRSTDLGTVIHEKAAALFEERVMRAAEEGADILYHPGRSGALLPPIVVDRVPHQSDLVLEETFGPIIPIVRVPDDDDATITLSNSTAFGLSSGVCTNDYRRMQKYIAGLKVGTVNIWEVPGYRIEMSPFGGIKDSGNGYKEGVIEAMKSFTNVKTFSLPWP
>NZ_CP021218.1|WP_010975822.1|813275_814550_-|phosphonoacetate-hydrolase
MNQMSKISVTVNGRRYPWPRVPAIAVCLDGCEPAYLDAAIDAGLMPALKRIKERGAVRLAHSVIPSFTNPNNLSIATGSPPAVHGICGNYLYEPSTGEEVMMNDPKFLRAPTIFQAFYDAGARVAVVTAKDKLRALLGKGLRFDEGRAVCFSSEKSDKATRAEHGIDNASAWLGRPVPEVYSAALSEFVFAAGVKLLREFRPDIMYLTTTDYVQHKYAPGVPEANSFYEMFDRYLAELDGLGAAIVVTADHGMKPKHKADGSPDVIYVQDLLDEWLGKDAARVILPITDPYVVHHGALGSFATAYLPDGCDRSEIMARLKAIQGVDVVLGREEACRRFELPEDRIGDIVLVSSENKTLGTSEHRHDLAALDEPLRSHGGLTEQEVPFIVNRVLPELPNAPRLRNFDAFFYAVTAAAEAGAEGGL

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP021218_2	2.1\|795069\|45\|NZ_CP021218\|CRISPRCasFinder	795069-795113	45	NC_003078	Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence	1085274-1085318	0	1.0
NZ_CP021218_2	2.1\|795069\|45\|NZ_CP021218\|CRISPRCasFinder	795069-795113	45	NZ_CP021799	Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence	1151496-1151540	0	1.0
NZ_CP021218_2	2.1\|795069\|45\|NZ_CP021218\|CRISPRCasFinder	795069-795113	45	NZ_CP021806	Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence	373266-373310	0	1.0
NZ_CP021218_2	2.1\|795069\|45\|NZ_CP021218\|CRISPRCasFinder	795069-795113	45	NC_020560	Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence	1085279-1085323	0	1.0
NZ_CP021218_2	2.1\|795069\|45\|NZ_CP021218\|CRISPRCasFinder	795069-795113	45	NC_018701	Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence	634337-634381	0	1.0
NZ_CP021218_2	2.1\|795069\|45\|NZ_CP021218\|CRISPRCasFinder	795069-795113	45	NZ_CP021802	Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence	1302265-1302309	0	1.0
NZ_CP021218_2	2.1\|795069\|45\|NZ_CP021218\|CRISPRCasFinder	795069-795113	45	NZ_CP021831	Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence	895761-895805	0	1.0
NZ_CP021218_2	2.1\|795069\|45\|NZ_CP021218\|CRISPRCasFinder	795069-795113	45	NZ_CP021810	Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence	1423128-1423172	0	1.0
NZ_CP021218_2	2.1\|795069\|45\|NZ_CP021218\|CRISPRCasFinder	795069-795113	45	NZ_CP021218	Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence	795069-795113	0	1.0
NZ_CP021218_2	2.1\|795069\|45\|NZ_CP021218\|CRISPRCasFinder	795069-795113	45	NZ_CP019586	Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence	1054100-1054144	1	0.978
NZ_CP021218_2	2.1\|795069\|45\|NZ_CP021218\|CRISPRCasFinder	795069-795113	45	NZ_CP021828	Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence	656013-656057	1	0.978
NZ_CP021218_2	2.1\|795069\|45\|NZ_CP021218\|CRISPRCasFinder	795069-795113	45	NZ_CP021823	Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence	772894-772938	1	0.978
NZ_CP021218_2	2.1\|795069\|45\|NZ_CP021218\|CRISPRCasFinder	795069-795113	45	NZ_CP021795	Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence	292351-292395	1	0.978
NZ_CP021218_2	2.1\|795069\|45\|NZ_CP021218\|CRISPRCasFinder	795069-795113	45	NZ_CP019484	Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence	1225853-1225897	1	0.978
NZ_CP021218_2	2.1\|795069\|45\|NZ_CP021218\|CRISPRCasFinder	795069-795113	45	NZ_CP019487	Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence	998536-998580	1	0.978
NZ_CP021218_2	2.1\|795069\|45\|NZ_CP021218\|CRISPRCasFinder	795069-795113	45	NC_019849	Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence	651469-651513	1	0.978
NZ_CP021218_2	2.1\|795069\|45\|NZ_CP021218\|CRISPRCasFinder	795069-795113	45	NC_017326	Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence	636463-636507	1	0.978
NZ_CP021218_2	2.1\|795069\|45\|NZ_CP021218\|CRISPRCasFinder	795069-795113	45	NC_017323	Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence	233510-233554	1	0.978
NZ_CP021218_2	2.1\|795069\|45\|NZ_CP021218\|CRISPRCasFinder	795069-795113	45	NZ_CP009146	Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence	644528-644572	1	0.978
NZ_CP021218_2	2.1\|795069\|45\|NZ_CP021218\|CRISPRCasFinder	795069-795113	45	NZ_CP021814	Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence	558514-558558	1	0.978
NZ_CP021218_2	2.1\|795069\|45\|NZ_CP021218\|CRISPRCasFinder	795069-795113	45	NZ_CP026527	Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence	658142-658186	1	0.978
NZ_CP021218_1	1.1\|794862\|63\|NZ_CP021218\|CRISPRCasFinder	794862-794924	63	NC_019849	Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence	651262-651324	3	0.952
NZ_CP021218_1	1.1\|794862\|63\|NZ_CP021218\|CRISPRCasFinder	794862-794924	63	NC_003078	Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence	1085463-1085525	3	0.952
NZ_CP021218_1	1.1\|794862\|63\|NZ_CP021218\|CRISPRCasFinder	794862-794924	63	NC_017326	Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence	636256-636318	3	0.952
NZ_CP021218_1	1.1\|794862\|63\|NZ_CP021218\|CRISPRCasFinder	794862-794924	63	NZ_CP021799	Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence	1151685-1151747	3	0.952
NZ_CP021218_1	1.1\|794862\|63\|NZ_CP021218\|CRISPRCasFinder	794862-794924	63	NC_017323	Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence	233303-233365	3	0.952
NZ_CP021218_1	1.1\|794862\|63\|NZ_CP021218\|CRISPRCasFinder	794862-794924	63	NZ_CP009146	Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence	644321-644383	3	0.952
NZ_CP021218_1	1.1\|794862\|63\|NZ_CP021218\|CRISPRCasFinder	794862-794924	63	NC_018701	Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence	634130-634192	3	0.952
NZ_CP021218_1	1.1\|794862\|63\|NZ_CP021218\|CRISPRCasFinder	794862-794924	63	NZ_CP021802	Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence	1302058-1302120	3	0.952
NZ_CP021218_1	1.1\|794862\|63\|NZ_CP021218\|CRISPRCasFinder	794862-794924	63	NZ_CP021831	Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence	895554-895616	3	0.952
NZ_CP021218_1	1.1\|794862\|63\|NZ_CP021218\|CRISPRCasFinder	794862-794924	63	NZ_CP021823	Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence	773083-773145	3	0.952
NZ_CP021218_1	1.1\|794862\|63\|NZ_CP021218\|CRISPRCasFinder	794862-794924	63	NZ_CP021814	Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence	558307-558369	3	0.952
NZ_CP021218_1	1.1\|794862\|63\|NZ_CP021218\|CRISPRCasFinder	794862-794924	63	NZ_CP021795	Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence	292540-292602	3	0.952
NZ_CP021218_1	1.1\|794862\|63\|NZ_CP021218\|CRISPRCasFinder	794862-794924	63	NZ_CP021810	Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence	1422921-1422983	3	0.952
NZ_CP021218_1	1.1\|794862\|63\|NZ_CP021218\|CRISPRCasFinder	794862-794924	63	NZ_CP021806	Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence	373455-373517	3	0.952
NZ_CP021218_1	1.1\|794862\|63\|NZ_CP021218\|CRISPRCasFinder	794862-794924	63	NZ_CP021218	Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence	794862-794924	3	0.952
NZ_CP021218_1	1.1\|794862\|63\|NZ_CP021218\|CRISPRCasFinder	794862-794924	63	NZ_CP026527	Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence	657935-657997	3	0.952
NZ_CP021218_1	1.1\|794862\|63\|NZ_CP021218\|CRISPRCasFinder	794862-794924	63	NZ_CP019484	Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence	1226042-1226104	3	0.952
NZ_CP021218_1	1.1\|794862\|63\|NZ_CP021218\|CRISPRCasFinder	794862-794924	63	NZ_CP019487	Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence	998725-998787	3	0.952
NZ_CP021218_1	1.1\|794862\|63\|NZ_CP021218\|CRISPRCasFinder	794862-794924	63	NC_020560	Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence	1085468-1085530	3	0.952
NZ_CP021218_1	1.1\|794862\|63\|NZ_CP021218\|CRISPRCasFinder	794862-794924	63	NZ_CP019586	Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence	1054289-1054351	4	0.937
NZ_CP021218_1	1.1\|794862\|63\|NZ_CP021218\|CRISPRCasFinder	794862-794924	63	NZ_CP021828	Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence	656199-656261	4	0.937
NZ_CP021218_3	3.1\|795243\|66\|NZ_CP021218\|CRISPRCasFinder	795243-795308	66	NC_019849	Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence	651643-651708	6	0.909
NZ_CP021218_3	3.1\|795243\|66\|NZ_CP021218\|CRISPRCasFinder	795243-795308	66	NC_003078	Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence	1085079-1085144	6	0.909
NZ_CP021218_3	3.1\|795243\|66\|NZ_CP021218\|CRISPRCasFinder	795243-795308	66	NZ_CP019586	Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence	1053905-1053970	6	0.909
NZ_CP021218_3	3.1\|795243\|66\|NZ_CP021218\|CRISPRCasFinder	795243-795308	66	NC_017326	Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence	636637-636702	6	0.909
NZ_CP021218_3	3.1\|795243\|66\|NZ_CP021218\|CRISPRCasFinder	795243-795308	66	NZ_CP021799	Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence	1151301-1151366	6	0.909
NZ_CP021218_3	3.1\|795243\|66\|NZ_CP021218\|CRISPRCasFinder	795243-795308	66	NC_017323	Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence	233684-233749	6	0.909
NZ_CP021218_3	3.1\|795243\|66\|NZ_CP021218\|CRISPRCasFinder	795243-795308	66	NZ_CP009146	Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence	644702-644767	6	0.909
NZ_CP021218_3	3.1\|795243\|66\|NZ_CP021218\|CRISPRCasFinder	795243-795308	66	NC_018701	Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence	634511-634576	6	0.909
NZ_CP021218_3	3.1\|795243\|66\|NZ_CP021218\|CRISPRCasFinder	795243-795308	66	NZ_CP021828	Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence	655818-655883	6	0.909
NZ_CP021218_3	3.1\|795243\|66\|NZ_CP021218\|CRISPRCasFinder	795243-795308	66	NZ_CP021802	Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence	1302439-1302504	6	0.909
NZ_CP021218_3	3.1\|795243\|66\|NZ_CP021218\|CRISPRCasFinder	795243-795308	66	NZ_CP021831	Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence	895935-896000	6	0.909
NZ_CP021218_3	3.1\|795243\|66\|NZ_CP021218\|CRISPRCasFinder	795243-795308	66	NZ_CP021823	Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence	772699-772764	6	0.909
NZ_CP021218_3	3.1\|795243\|66\|NZ_CP021218\|CRISPRCasFinder	795243-795308	66	NZ_CP021814	Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence	558688-558753	6	0.909
NZ_CP021218_3	3.1\|795243\|66\|NZ_CP021218\|CRISPRCasFinder	795243-795308	66	NZ_CP021795	Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence	292156-292221	6	0.909
NZ_CP021218_3	3.1\|795243\|66\|NZ_CP021218\|CRISPRCasFinder	795243-795308	66	NZ_CP021810	Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence	1423302-1423367	6	0.909
NZ_CP021218_3	3.1\|795243\|66\|NZ_CP021218\|CRISPRCasFinder	795243-795308	66	NZ_CP021806	Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence	373071-373136	6	0.909
NZ_CP021218_3	3.1\|795243\|66\|NZ_CP021218\|CRISPRCasFinder	795243-795308	66	NZ_CP021218	Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence	795243-795308	6	0.909
NZ_CP021218_3	3.1\|795243\|66\|NZ_CP021218\|CRISPRCasFinder	795243-795308	66	NZ_CP026527	Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence	658316-658381	6	0.909
NZ_CP021218_3	3.1\|795243\|66\|NZ_CP021218\|CRISPRCasFinder	795243-795308	66	NZ_CP019484	Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence	1225658-1225723	6	0.909
NZ_CP021218_3	3.1\|795243\|66\|NZ_CP021218\|CRISPRCasFinder	795243-795308	66	NZ_CP019487	Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence	998341-998406	6	0.909
NZ_CP021218_3	3.1\|795243\|66\|NZ_CP021218\|CRISPRCasFinder	795243-795308	66	NC_020560	Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence	1085084-1085149	6	0.909

1. spacer 2.1|795069|45|NZ_CP021218|CRISPRCasFinder matches to NC_003078 (Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence) position: , mismatch: 0, identity: 1.0

agccgccgccgacggtgatcctgcccgccgcctcgtcggaaccgt	CRISPR spacer
agccgccgccgacggtgatcctgcccgccgcctcgtcggaaccgt	Protospacer
*********************************************

2. spacer 2.1|795069|45|NZ_CP021218|CRISPRCasFinder matches to NZ_CP021799 (Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence) position: , mismatch: 0, identity: 1.0

agccgccgccgacggtgatcctgcccgccgcctcgtcggaaccgt	CRISPR spacer
agccgccgccgacggtgatcctgcccgccgcctcgtcggaaccgt	Protospacer
*********************************************

3. spacer 2.1|795069|45|NZ_CP021218|CRISPRCasFinder matches to NZ_CP021806 (Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence) position: , mismatch: 0, identity: 1.0

agccgccgccgacggtgatcctgcccgccgcctcgtcggaaccgt	CRISPR spacer
agccgccgccgacggtgatcctgcccgccgcctcgtcggaaccgt	Protospacer
*********************************************

4. spacer 2.1|795069|45|NZ_CP021218|CRISPRCasFinder matches to NC_020560 (Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence) position: , mismatch: 0, identity: 1.0

agccgccgccgacggtgatcctgcccgccgcctcgtcggaaccgt	CRISPR spacer
agccgccgccgacggtgatcctgcccgccgcctcgtcggaaccgt	Protospacer
*********************************************

5. spacer 2.1|795069|45|NZ_CP021218|CRISPRCasFinder matches to NC_018701 (Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence) position: , mismatch: 0, identity: 1.0

agccgccgccgacggtgatcctgcccgccgcctcgtcggaaccgt	CRISPR spacer
agccgccgccgacggtgatcctgcccgccgcctcgtcggaaccgt	Protospacer
*********************************************

6. spacer 2.1|795069|45|NZ_CP021218|CRISPRCasFinder matches to NZ_CP021802 (Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence) position: , mismatch: 0, identity: 1.0

agccgccgccgacggtgatcctgcccgccgcctcgtcggaaccgt	CRISPR spacer
agccgccgccgacggtgatcctgcccgccgcctcgtcggaaccgt	Protospacer
*********************************************

7. spacer 2.1|795069|45|NZ_CP021218|CRISPRCasFinder matches to NZ_CP021831 (Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence) position: , mismatch: 0, identity: 1.0

agccgccgccgacggtgatcctgcccgccgcctcgtcggaaccgt	CRISPR spacer
agccgccgccgacggtgatcctgcccgccgcctcgtcggaaccgt	Protospacer
*********************************************

8. spacer 2.1|795069|45|NZ_CP021218|CRISPRCasFinder matches to NZ_CP021810 (Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence) position: , mismatch: 0, identity: 1.0

agccgccgccgacggtgatcctgcccgccgcctcgtcggaaccgt	CRISPR spacer
agccgccgccgacggtgatcctgcccgccgcctcgtcggaaccgt	Protospacer
*********************************************

9. spacer 2.1|795069|45|NZ_CP021218|CRISPRCasFinder matches to NZ_CP021218 (Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence) position: , mismatch: 0, identity: 1.0

agccgccgccgacggtgatcctgcccgccgcctcgtcggaaccgt	CRISPR spacer
agccgccgccgacggtgatcctgcccgccgcctcgtcggaaccgt	Protospacer
*********************************************

10. spacer 2.1|795069|45|NZ_CP021218|CRISPRCasFinder matches to NZ_CP019586 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence) position: , mismatch: 1, identity: 0.978

agccgccgccgacggtgatcctgcccgccgcctcgtcggaaccgt	CRISPR spacer
agccgcccccgacggtgatcctgcccgccgcctcgtcggaaccgt	Protospacer
******* *************************************

11. spacer 2.1|795069|45|NZ_CP021218|CRISPRCasFinder matches to NZ_CP021828 (Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence) position: , mismatch: 1, identity: 0.978

agccgccgccgacggtgatcctgcccgccgcctcgtcggaaccgt	CRISPR spacer
agccgcccccgacggtgatcctgcccgccgcctcgtcggaaccgt	Protospacer
******* *************************************

12. spacer 2.1|795069|45|NZ_CP021218|CRISPRCasFinder matches to NZ_CP021823 (Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence) position: , mismatch: 1, identity: 0.978

agccgccgccgacggtgatcctgcccgccgcctcgtcggaaccgt	CRISPR spacer
agccgcccccgacggtgatcctgcccgccgcctcgtcggaaccgt	Protospacer
******* *************************************

13. spacer 2.1|795069|45|NZ_CP021218|CRISPRCasFinder matches to NZ_CP021795 (Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence) position: , mismatch: 1, identity: 0.978

agccgccgccgacggtgatcctgcccgccgcctcgtcggaaccgt	CRISPR spacer
agccgcccccgacggtgatcctgcccgccgcctcgtcggaaccgt	Protospacer
******* *************************************

14. spacer 2.1|795069|45|NZ_CP021218|CRISPRCasFinder matches to NZ_CP019484 (Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence) position: , mismatch: 1, identity: 0.978

agccgccgccgacggtgatcctgcccgccgcctcgtcggaaccgt	CRISPR spacer
agccgcccccgacggtgatcctgcccgccgcctcgtcggaaccgt	Protospacer
******* *************************************

15. spacer 2.1|795069|45|NZ_CP021218|CRISPRCasFinder matches to NZ_CP019487 (Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence) position: , mismatch: 1, identity: 0.978

agccgccgccgacggtgatcctgcccgccgcctcgtcggaaccgt	CRISPR spacer
agccgcccccgacggtgatcctgcccgccgcctcgtcggaaccgt	Protospacer
******* *************************************

16. spacer 2.1|795069|45|NZ_CP021218|CRISPRCasFinder matches to NC_019849 (Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence) position: , mismatch: 1, identity: 0.978

agccgccgccgacggtgatcctgcccgccgcctcgtcggaaccgt	CRISPR spacer
agccgcccccgacggtgatcctgcccgccgcctcgtcggaaccgt	Protospacer
******* *************************************

17. spacer 2.1|795069|45|NZ_CP021218|CRISPRCasFinder matches to NC_017326 (Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence) position: , mismatch: 1, identity: 0.978

agccgccgccgacggtgatcctgcccgccgcctcgtcggaaccgt	CRISPR spacer
agccgcccccgacggtgatcctgcccgccgcctcgtcggaaccgt	Protospacer
******* *************************************

18. spacer 2.1|795069|45|NZ_CP021218|CRISPRCasFinder matches to NC_017323 (Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence) position: , mismatch: 1, identity: 0.978

agccgccgccgacggtgatcctgcccgccgcctcgtcggaaccgt	CRISPR spacer
agccgcccccgacggtgatcctgcccgccgcctcgtcggaaccgt	Protospacer
******* *************************************

19. spacer 2.1|795069|45|NZ_CP021218|CRISPRCasFinder matches to NZ_CP009146 (Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence) position: , mismatch: 1, identity: 0.978

agccgccgccgacggtgatcctgcccgccgcctcgtcggaaccgt	CRISPR spacer
agccgcccccgacggtgatcctgcccgccgcctcgtcggaaccgt	Protospacer
******* *************************************

20. spacer 2.1|795069|45|NZ_CP021218|CRISPRCasFinder matches to NZ_CP021814 (Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence) position: , mismatch: 1, identity: 0.978

agccgccgccgacggtgatcctgcccgccgcctcgtcggaaccgt	CRISPR spacer
agccgcccccgacggtgatcctgcccgccgcctcgtcggaaccgt	Protospacer
******* *************************************

21. spacer 2.1|795069|45|NZ_CP021218|CRISPRCasFinder matches to NZ_CP026527 (Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence) position: , mismatch: 1, identity: 0.978

agccgccgccgacggtgatcctgcccgccgcctcgtcggaaccgt	CRISPR spacer
agccgcccccgacggtgatcctgcccgccgcctcgtcggaaccgt	Protospacer
******* *************************************

22. spacer 1.1|794862|63|NZ_CP021218|CRISPRCasFinder matches to NC_019849 (Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence) position: , mismatch: 3, identity: 0.952

caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	CRISPR spacer
caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	Protospacer
************************************************************

23. spacer 1.1|794862|63|NZ_CP021218|CRISPRCasFinder matches to NC_003078 (Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence) position: , mismatch: 3, identity: 0.952

caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	CRISPR spacer
caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	Protospacer
************************************************************

24. spacer 1.1|794862|63|NZ_CP021218|CRISPRCasFinder matches to NC_017326 (Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence) position: , mismatch: 3, identity: 0.952

caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	CRISPR spacer
caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	Protospacer
************************************************************

25. spacer 1.1|794862|63|NZ_CP021218|CRISPRCasFinder matches to NZ_CP021799 (Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence) position: , mismatch: 3, identity: 0.952

caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	CRISPR spacer
caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	Protospacer
************************************************************

26. spacer 1.1|794862|63|NZ_CP021218|CRISPRCasFinder matches to NC_017323 (Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence) position: , mismatch: 3, identity: 0.952

caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	CRISPR spacer
caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	Protospacer
************************************************************

27. spacer 1.1|794862|63|NZ_CP021218|CRISPRCasFinder matches to NZ_CP009146 (Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence) position: , mismatch: 3, identity: 0.952

caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	CRISPR spacer
caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	Protospacer
************************************************************

28. spacer 1.1|794862|63|NZ_CP021218|CRISPRCasFinder matches to NC_018701 (Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence) position: , mismatch: 3, identity: 0.952

caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	CRISPR spacer
caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	Protospacer
************************************************************

29. spacer 1.1|794862|63|NZ_CP021218|CRISPRCasFinder matches to NZ_CP021802 (Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence) position: , mismatch: 3, identity: 0.952

caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	CRISPR spacer
caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	Protospacer
************************************************************

30. spacer 1.1|794862|63|NZ_CP021218|CRISPRCasFinder matches to NZ_CP021831 (Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence) position: , mismatch: 3, identity: 0.952

caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	CRISPR spacer
caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	Protospacer
************************************************************

31. spacer 1.1|794862|63|NZ_CP021218|CRISPRCasFinder matches to NZ_CP021823 (Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence) position: , mismatch: 3, identity: 0.952

caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	CRISPR spacer
caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	Protospacer
************************************************************

32. spacer 1.1|794862|63|NZ_CP021218|CRISPRCasFinder matches to NZ_CP021814 (Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence) position: , mismatch: 3, identity: 0.952

caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	CRISPR spacer
caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	Protospacer
************************************************************

33. spacer 1.1|794862|63|NZ_CP021218|CRISPRCasFinder matches to NZ_CP021795 (Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence) position: , mismatch: 3, identity: 0.952

caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	CRISPR spacer
caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	Protospacer
************************************************************

34. spacer 1.1|794862|63|NZ_CP021218|CRISPRCasFinder matches to NZ_CP021810 (Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence) position: , mismatch: 3, identity: 0.952

caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	CRISPR spacer
caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	Protospacer
************************************************************

35. spacer 1.1|794862|63|NZ_CP021218|CRISPRCasFinder matches to NZ_CP021806 (Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence) position: , mismatch: 3, identity: 0.952

caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	CRISPR spacer
caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	Protospacer
************************************************************

36. spacer 1.1|794862|63|NZ_CP021218|CRISPRCasFinder matches to NZ_CP021218 (Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence) position: , mismatch: 3, identity: 0.952

caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	CRISPR spacer
caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	Protospacer
************************************************************

37. spacer 1.1|794862|63|NZ_CP021218|CRISPRCasFinder matches to NZ_CP026527 (Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence) position: , mismatch: 3, identity: 0.952

caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	CRISPR spacer
caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	Protospacer
************************************************************

38. spacer 1.1|794862|63|NZ_CP021218|CRISPRCasFinder matches to NZ_CP019484 (Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence) position: , mismatch: 3, identity: 0.952

caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	CRISPR spacer
caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	Protospacer
************************************************************

39. spacer 1.1|794862|63|NZ_CP021218|CRISPRCasFinder matches to NZ_CP019487 (Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence) position: , mismatch: 3, identity: 0.952

caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	CRISPR spacer
caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	Protospacer
************************************************************

40. spacer 1.1|794862|63|NZ_CP021218|CRISPRCasFinder matches to NC_020560 (Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence) position: , mismatch: 3, identity: 0.952

caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	CRISPR spacer
caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	Protospacer
************************************************************

41. spacer 1.1|794862|63|NZ_CP021218|CRISPRCasFinder matches to NZ_CP019586 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence) position: , mismatch: 4, identity: 0.937

caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	CRISPR spacer
caccgccgctgccgccgacgacgagatcgatcgtgtggctgtactctttttcggcggccg	Protospacer
******************************************.*****************

42. spacer 1.1|794862|63|NZ_CP021218|CRISPRCasFinder matches to NZ_CP021828 (Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence) position: , mismatch: 4, identity: 0.937

caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	CRISPR spacer
caccgccgctgccgccgacgacgagatcgatcgtgtggctgtactctttttcggcggccg	Protospacer
******************************************.*****************

43. spacer 3.1|795243|66|NZ_CP021218|CRISPRCasFinder matches to NC_019849 (Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence) position: , mismatch: 6, identity: 0.909

caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	CRISPR spacer
caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	Protospacer
************************************************************

44. spacer 3.1|795243|66|NZ_CP021218|CRISPRCasFinder matches to NC_003078 (Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.909

caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	CRISPR spacer
caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	Protospacer
************************************************************

45. spacer 3.1|795243|66|NZ_CP021218|CRISPRCasFinder matches to NZ_CP019586 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.909

caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	CRISPR spacer
caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	Protospacer
************************************************************

46. spacer 3.1|795243|66|NZ_CP021218|CRISPRCasFinder matches to NC_017326 (Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence) position: , mismatch: 6, identity: 0.909

caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	CRISPR spacer
caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	Protospacer
************************************************************

47. spacer 3.1|795243|66|NZ_CP021218|CRISPRCasFinder matches to NZ_CP021799 (Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.909

caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	CRISPR spacer
caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	Protospacer
************************************************************

48. spacer 3.1|795243|66|NZ_CP021218|CRISPRCasFinder matches to NC_017323 (Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence) position: , mismatch: 6, identity: 0.909

caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	CRISPR spacer
caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	Protospacer
************************************************************

49. spacer 3.1|795243|66|NZ_CP021218|CRISPRCasFinder matches to NZ_CP009146 (Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.909

caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	CRISPR spacer
caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	Protospacer
************************************************************

50. spacer 3.1|795243|66|NZ_CP021218|CRISPRCasFinder matches to NC_018701 (Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence) position: , mismatch: 6, identity: 0.909

caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	CRISPR spacer
caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	Protospacer
************************************************************

51. spacer 3.1|795243|66|NZ_CP021218|CRISPRCasFinder matches to NZ_CP021828 (Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.909

caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	CRISPR spacer
caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	Protospacer
************************************************************

52. spacer 3.1|795243|66|NZ_CP021218|CRISPRCasFinder matches to NZ_CP021802 (Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.909

caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	CRISPR spacer
caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	Protospacer
************************************************************

53. spacer 3.1|795243|66|NZ_CP021218|CRISPRCasFinder matches to NZ_CP021831 (Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.909

caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	CRISPR spacer
caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	Protospacer
************************************************************

54. spacer 3.1|795243|66|NZ_CP021218|CRISPRCasFinder matches to NZ_CP021823 (Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.909

caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	CRISPR spacer
caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	Protospacer
************************************************************

55. spacer 3.1|795243|66|NZ_CP021218|CRISPRCasFinder matches to NZ_CP021814 (Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.909

caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	CRISPR spacer
caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	Protospacer
************************************************************

56. spacer 3.1|795243|66|NZ_CP021218|CRISPRCasFinder matches to NZ_CP021795 (Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.909

caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	CRISPR spacer
caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	Protospacer
************************************************************

57. spacer 3.1|795243|66|NZ_CP021218|CRISPRCasFinder matches to NZ_CP021810 (Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.909

caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	CRISPR spacer
caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	Protospacer
************************************************************

58. spacer 3.1|795243|66|NZ_CP021218|CRISPRCasFinder matches to NZ_CP021806 (Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.909

caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	CRISPR spacer
caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	Protospacer
************************************************************

59. spacer 3.1|795243|66|NZ_CP021218|CRISPRCasFinder matches to NZ_CP021218 (Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.909

caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	CRISPR spacer
caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	Protospacer
************************************************************

60. spacer 3.1|795243|66|NZ_CP021218|CRISPRCasFinder matches to NZ_CP026527 (Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.909

caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	CRISPR spacer
caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	Protospacer
************************************************************

61. spacer 3.1|795243|66|NZ_CP021218|CRISPRCasFinder matches to NZ_CP019484 (Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.909

caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	CRISPR spacer
caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	Protospacer
************************************************************

62. spacer 3.1|795243|66|NZ_CP021218|CRISPRCasFinder matches to NZ_CP019487 (Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence) position: , mismatch: 6, identity: 0.909

caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	CRISPR spacer
caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	Protospacer
************************************************************

63. spacer 3.1|795243|66|NZ_CP021218|CRISPRCasFinder matches to NC_020560 (Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.909

caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	CRISPR spacer
caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	Protospacer
************************************************************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

418270 : 427117

Escherichia_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_017272476.1\|418270_419548_-	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	3.7e-74	42.8
WP_010976193.1\|419551_420328_-	hydroxypyruvate isomerase family protein	NA	NA	NA	NA
WP_017272475.1\|420339_421245_-	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	3.9e-70	49.7
WP_010976191.1\|421388_422393_+	LacI family DNA-binding transcriptional regulator	C6ZCU4	Enterobacteria_phage	2.2e-13	26.8
WP_014527789.1\|422409_423087_+	aldolase	A0A077SK32	Escherichia_phage	2.6e-50	50.2
WP_015008142.1\|423394_424159_+	FadR family transcriptional regulator	NA	NA	NA	NA
WP_013850372.1\|424203_425187_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_010976186.1\|425188_425965_+	SDR family oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	4.9e-05	28.2
WP_010976185.1\|426049_427117_+	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	G3M9Y6	Bacillus_virus	4.5e-25	33.0

DBSCAN-SWA_2

722332 : 788870

uncultured_virus(30.0%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014530348.1\|722332_723451_-\|protease	site-2 protease family protein	NA	NA	NA	NA
WP_010975886.1\|723751_725272_+	alpha-N-arabinofuranosidase	NA	NA	NA	NA
WP_010975885.1\|725333_726422_+	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	G3M9Y6	Bacillus_virus	1.1e-23	31.2
WP_013850583.1\|726508_727777_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_010975883.1\|727855_728731_+	sugar ABC transporter permease	NA	NA	NA	NA
WP_004434537.1\|728734_729559_+	carbohydrate ABC transporter permease	NA	NA	NA	NA
WP_010975882.1\|729685_730606_+	transcriptional regulator	NA	NA	NA	NA
WP_029727779.1\|730887_732078_+	class C beta-lactamase	NA	NA	NA	NA
WP_004434550.1\|732164_732464_-	hypothetical protein	NA	NA	NA	NA
WP_010975880.1\|732665_733715_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_010975879.1\|733948_734980_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_010975878.1\|734993_735896_+	sugar phosphate isomerase/epimerase	NA	NA	NA	NA
WP_010975877.1\|735960_737193_+	sugar ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_010975876.1\|737362_738265_+	sugar ABC transporter permease	NA	NA	NA	NA
WP_004434577.1\|738261_739089_+	carbohydrate ABC transporter permease	NA	NA	NA	NA
WP_010975875.1\|739085_740237_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.9e-25	32.0
WP_010975874.1\|740382_741117_-	FadR family transcriptional regulator	NA	NA	NA	NA
WP_010975873.1\|741134_742103_-	sugar ABC transporter permease YjfF	NA	NA	NA	NA
WP_033045625.1\|742099_743113_-	ABC transporter permease	NA	NA	NA	NA
WP_013850593.1\|743121_744639_-	sugar ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	2.9e-17	26.2
WP_010975870.1\|744781_745744_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_011970797.1\|745946_746892_+\|transposase	IS630-like element ISRm2011-2 family transposase	S5VXX4	Leptospira_phage	1.0e-12	24.7
WP_010975869.1\|746950_747997_-	glutathione synthase	NA	NA	NA	NA
WP_014527117.1\|748011_749898_-	flavohemoglobin expression-modulating QEGLA motif protein	NA	NA	NA	NA
WP_017271655.1\|749894_750752_-	N-formylglutamate amidohydrolase	NA	NA	NA	NA
WP_004434611.1\|750791_751004_-	hypothetical protein	NA	NA	NA	NA
WP_010975865.1\|751171_751804_-	exopolysaccharide biosynthesis protein	NA	NA	NA	NA
WP_014527118.1\|751898_752990_-	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_010975863.1\|753254_753701_+	DedA family protein	NA	NA	NA	NA
WP_014527120.1\|753747_754191_-	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA
WP_029728001.1\|754250_756734_-	copper-translocating P-type ATPase	A0A218MNH6	uncultured_virus	1.8e-101	35.5
WP_014527122.1\|756959_757181_-	heavy-metal-associated domain-containing protein	NA	NA	NA	NA
WP_017271656.1\|757435_757759_-	hypothetical protein	NA	NA	NA	NA
WP_014527124.1\|757933_758299_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_014527125.1\|758300_759506_+	arsenite efflux MFS transporter ArsK	NA	NA	NA	NA
WP_014527126.1\|759879_760263_-	HAMP domain-containing histidine kinase	NA	NA	NA	NA
WP_013850605.1\|760681_761665_-	murein L,D-transpeptidase	NA	NA	NA	NA
WP_004434654.1\|761761_762763_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_004434671.1\|762860_763487_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_014527128.1\|763628_765665_+	NADH:flavin oxidoreductase	NA	NA	NA	NA
WP_010975853.1\|765711_766311_+	dimethylsulfoniopropionate lyase	NA	NA	NA	NA
WP_013850607.1\|766543_766816_-	usg protein	NA	NA	NA	NA
WP_013850608.1\|767097_767412_+	co-chaperone GroES	A0A221S4G8	uncultured_virus	1.4e-22	58.7
WP_014527129.1\|767458_769087_+	chaperonin GroEL	A0A240F779	uncultured_virus	9.9e-181	60.3
WP_017271657.1\|769157_769904_-	thioredoxin family protein	NA	NA	NA	NA
WP_013850611.1\|770177_770714_+	transcriptional regulator	NA	NA	NA	NA
WP_029728002.1\|770844_771396_+	Spy/CpxP family protein refolding chaperone	NA	NA	NA	NA
WP_013850612.1\|771432_772131_+	response regulator transcription factor	W8CYM9	Bacillus_phage	1.5e-37	37.0
WP_014527131.1\|772135_773398_+	HAMP domain-containing histidine kinase	A0A2K9L0Z8	Tupanvirus	3.9e-07	29.7
WP_010975843.1\|773680_774571_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_010975842.1\|774770_775394_+	(2Fe-2S)-binding protein	A0A0P0IVM8	Acinetobacter_phage	3.6e-14	35.3
WP_029728004.1\|775390_776368_+	xanthine dehydrogenase family protein subunit M	NA	NA	NA	NA
WP_014527132.1\|776364_778590_+	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	NA	NA	NA
WP_029728006.1\|778670_780452_-	cation:proton antiporter	NA	NA	NA	NA
WP_033043755.1\|781068_781542_+	hypothetical protein	NA	NA	NA	NA
WP_017266907.1\|781696_782206_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_010970069.1\|782511_783846_+\|transposase	ISNCY-like element ISRm17 family transposase	NA	NA	NA	NA
WP_010970069.1\|784182_785517_+\|transposase	ISNCY-like element ISRm17 family transposase	NA	NA	NA	NA
WP_010970069.1\|785864_787199_+\|transposase	ISNCY-like element ISRm17 family transposase	NA	NA	NA	NA
WP_010970069.1\|787535_788870_+\|transposase	ISNCY-like element ISRm17 family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

5. NZ_CP021214

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 4579

Lactococcus_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_029728431.1\|597_1623_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_088194105.1\|3766_4579_-	ATP-binding protein	A0A059NT77	Lactococcus_phage	1.5e-28	35.7

DBSCAN-SWA_2

10272 : 11493

uncultured_virus(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_088194107.1\|10272_11493_+\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	3.0e-41	44.5

DBSCAN-SWA_3

21103 : 25057

Ochrobactrum_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_029728200.1\|21103_22423_-	replication initiation protein RepC	L7TKN6	Rhizobium_phage	6.4e-29	30.5
WP_029728199.1\|22638_23646_-	plasmid partitioning protein RepB	A0A240F4U0	Ochrobactrum_phage	7.2e-49	39.9
WP_029728198.1\|23839_25057_-	plasmid partitioning protein RepA	A0A240F4U1	Ochrobactrum_phage	4.1e-115	54.5

DBSCAN-SWA_4

40489 : 41266

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003535037.1\|40489_41266_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.1e-32	40.5

DBSCAN-SWA_5

51895 : 52708

Lactococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_088194105.1\|51895_52708_-	ATP-binding protein	A0A059NT77	Lactococcus_phage	1.5e-28	35.7

DBSCAN-SWA_6

66397 : 67081

Streptococcus_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_017273848.1\|66397_67081_-\|transposase	IS6 family transposase	A0A1X9I6C6	Streptococcus_phage	3.0e-38	41.1

DBSCAN-SWA_7

70838 : 72908

Mycobacterium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_017273893.1\|70838_72908_+	recombinase family protein	R4TNI9	Mycobacterium_phage	1.8e-14	24.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

6. NZ_CP021219

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP021219_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP021219_1

1033750-1033812

Orphan

Consensus_repeat	Method
CCCTCTCCCCGCATGCGGGGAGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP021219_1

>merge|NZ_CP021219|1|1033750-1033812|CRISPRCasFinder
CCTTCTCCCCGCGCGCGGGGACGACCGCCCCTCACCCTAACCCTCTCCCCGCATGCGGGGAGA

>NZ_CP021219|1|1|1033750-1033812|CRISPRCasFinder
CCTTCTCCCCGCGCGCGGGGACG	ACCGCCCCTCACCCTAA
CCCTCTCCCCGCATGCGGGGAGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP021219.1\|WP_010968385.1\|1041275_1042286_-\|type-II-secretion-system-F-family-protein	unknown	unknown	gnl\|CDD\|227300
NZ_CP021219.1\|WP_013844980.1\|1023914_1024934_-\|glucokinase	unknown	unknown	gnl\|CDD\|234716
NZ_CP021219.1\|WP_003531957.1\|1026855_1028715_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|173862
NZ_CP021219.1\|WP_010968394.1\|1022000_1023806_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
NZ_CP021219.1\|WP_010968390.1\|1032758_1033718_+\|glyoxylate/hydroxypyruvate-reductase-A	unknown	unknown	gnl\|CDD\|240641
NZ_CP021219.1\|WP_010968387.1\|1036771_1037581_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|227343
NZ_CP021219.1\|WP_013844977.1\|1042344_1043814_-\|Flp-pilus-assembly-complex-ATPase-component-TadA	unknown	unknown	gnl\|CDD\|227297
NZ_CP021219.1\|WP_013844979.1\|1035249_1036641_-\|leucyl-aminopeptidase	unknown	unknown	gnl\|CDD\|223338
NZ_CP021219.1\|WP_010968389.1\|1033954_1034809_-\|C40-family-peptidase	unknown	unknown	gnl\|CDD\|223862
NZ_CP021219.1\|WP_010968395.1\|1021164_1021983_-\|4-hydroxy-tetrahydrodipicolinate-reductase	unknown	unknown	gnl\|CDD\|223366
NZ_CP021219.1\|WP_003537743.1\|1034817_1035162_-\|winged-helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_CP021219.1\|WP_003531955.1\|1024995_1025376_-\|methylglyoxal-synthase	unknown	unknown	gnl\|CDD\|224716
NZ_CP021219.1\|WP_010968392.1\|1025496_1026564_-\|penicillin-insensitive-murein-endopeptidase	unknown	unknown	gnl\|CDD\|226293
NZ_CP021219.1\|WP_010968383.1\|1043875_1045162_-\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|227298
NZ_CP021219.1\|WP_014529989.1\|1040284_1041268_-\|type-II-secretion-system-F-family-protein	unknown	unknown	gnl\|CDD\|224975
NZ_CP021219.1\|WP_010968391.1\|1031119_1032748_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|226641
NZ_CP021219.1\|WP_003531958.1\|1028895_1029978_+\|microcin-C-ABC-transporter-permease-YejB	unknown	unknown	gnl\|CDD\|226642
NZ_CP021219.1\|WP_003531959.1\|1029977_1031111_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226690
NZ_CP021219.1\|WP_003537933.1\|1038892_1040056_-\|IS4-like-element-ISRm16-family-transposase	unknown	unknown	gnl\|CDD\|376573
NZ_CP021219.1\|WP_011970797.1\|1037779_1038726_-\|IS630-like-element-ISRm2011-2-family-transposase	unknown	unknown	gnl\|CDD\|315923

Protein	Function_ID	Function_description	E-value
NZ_CP021219.1\|WP_010968385.1\|1041275_1042286_-\|type-II-secretion-system-F-family-protein	gnl\|CDD\|227300	COG4965, TadB, Flp pilus assembly protein TadB [Intracellular trafficking and secretion].	3.38407e-115
NZ_CP021219.1\|WP_013844980.1\|1023914_1024934_-\|glucokinase	gnl\|CDD\|234716	PRK00292, glk, glucokinase; Provisional.	1.33162e-165
NZ_CP021219.1\|WP_003531957.1\|1026855_1028715_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|173862	cd08497, PBP2_NikA_DppA_OppA_like_14, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold. This CD represents the substrate-binding domain of an uncharacterized ATP-binding cassette (ABC) type nickel/dipeptide/oligopeptide-like transporter. The oligopeptide-binding protein OppA and the dipeptide-binding protein DppA show significant sequence similarity to NikA, the initial nickel receptor. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	0
NZ_CP021219.1\|WP_010968394.1\|1022000_1023806_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	0
NZ_CP021219.1\|WP_010968390.1\|1032758_1033718_+\|glyoxylate/hydroxypyruvate-reductase-A	gnl\|CDD\|240641	cd12164, GDH_like_2, Putative glycerate dehydrogenase and related proteins of the D-specific 2-hydroxy dehydrogenase family. This group contains a variety of proteins variously identified as glycerate dehydrogenase (GDH, also known as hydroxypyruvate reductase) and other enzymes of the 2-hydroxyacid dehydrogenase family. GDH catalyzes the reversible reaction of (R)-glycerate + NAD+ to hydroxypyruvate + NADH + H+. 2-hydroxyacid dehydrogenases catalyze the conversion of a wide variety of D-2-hydroxy acids to their corresponding keto acids. The general mechanism is (R)-lactate + acceptor to pyruvate + reduced acceptor. Formate/glycerate and related dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily include groups such as formate dehydrogenase, glycerate dehydrogenase, L-alanine dehydrogenase, and S-adenosylhomocysteine hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann-fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomain but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. While many members of this family are dimeric, alanine DH is hexameric and phosphoglycerate DH is tetrameric.	1.07536e-138
NZ_CP021219.1\|WP_010968387.1\|1036771_1037581_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|227343	COG5010, TadD, Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking and secretion].	1.63751e-80
NZ_CP021219.1\|WP_013844977.1\|1042344_1043814_-\|Flp-pilus-assembly-complex-ATPase-component-TadA	gnl\|CDD\|227297	COG4962, CpaF, Flp pilus assembly protein, ATPase CpaF [Intracellular trafficking and secretion].	0
NZ_CP021219.1\|WP_013844979.1\|1035249_1036641_-\|leucyl-aminopeptidase	gnl\|CDD\|223338	COG0260, PepB, Leucyl aminopeptidase [Amino acid transport and metabolism].	0
NZ_CP021219.1\|WP_010968389.1\|1033954_1034809_-\|C40-family-peptidase	gnl\|CDD\|223862	COG0791, Spr, Cell wall-associated hydrolases (invasion-associated proteins) [Cell envelope biogenesis, outer membrane].	1.21182e-26
NZ_CP021219.1\|WP_010968395.1\|1021164_1021983_-\|4-hydroxy-tetrahydrodipicolinate-reductase	gnl\|CDD\|223366	COG0289, DapB, Dihydrodipicolinate reductase [Amino acid transport and metabolism].	1.01351e-123
NZ_CP021219.1\|WP_003537743.1\|1034817_1035162_-\|winged-helix-turn-helix-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	2.39809e-11
NZ_CP021219.1\|WP_003531955.1\|1024995_1025376_-\|methylglyoxal-synthase	gnl\|CDD\|224716	COG1803, MgsA, Methylglyoxal synthase [Carbohydrate transport and metabolism].	2.60323e-72
NZ_CP021219.1\|WP_010968392.1\|1025496_1026564_-\|penicillin-insensitive-murein-endopeptidase	gnl\|CDD\|226293	COG3770, MepA, Murein endopeptidase [Cell envelope biogenesis, outer membrane].	5.68793e-158
NZ_CP021219.1\|WP_010968383.1\|1043875_1045162_-\|transcriptional-regulator	gnl\|CDD\|227298	COG4963, CpaE, Flp pilus assembly protein, ATPase CpaE [Intracellular trafficking and secretion].	6.1818e-120
NZ_CP021219.1\|WP_014529989.1\|1040284_1041268_-\|type-II-secretion-system-F-family-protein	gnl\|CDD\|224975	COG2064, TadC, Flp pilus assembly protein TadC [Cell motility and secretion / Intracellular trafficking and secretion].	1.0007e-55
NZ_CP021219.1\|WP_010968391.1\|1031119_1032748_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|226641	COG4172, COG4172, ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only].	0
NZ_CP021219.1\|WP_003531958.1\|1028895_1029978_+\|microcin-C-ABC-transporter-permease-YejB	gnl\|CDD\|226642	COG4174, COG4174, ABC-type uncharacterized transport system, permease component [General function prediction only].	0
NZ_CP021219.1\|WP_003531959.1\|1029977_1031111_+\|ABC-transporter-permease	gnl\|CDD\|226690	COG4239, COG4239, ABC-type uncharacterized transport system, permease component [General function prediction only].	0
NZ_CP021219.1\|WP_003537933.1\|1038892_1040056_-\|IS4-like-element-ISRm16-family-transposase	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	1.69173e-26
NZ_CP021219.1\|WP_011970797.1\|1037779_1038726_-\|IS630-like-element-ISRm2011-2-family-transposase	gnl\|CDD\|315923	pfam13358, DDE_3, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	9.17752e-46

>NZ_CP021219.1|WP_010968390.1|1032758_1033718_+|glyoxylate/hydroxypyruvate-reductase-A
MPAKSPVIVDLKFIPEEVEAALAGAFPGREVIDLADPAHQERDLSGIDYAVVWKSAPDLFSRAPDLKVVFSGGAGVDHVLTLPGLPDVPLVRFVDRTLTTRMSEWVMMQCLLHLRQHRAYEALAKKHEWRDLSQPEAADVTVGIMGMGVLGQDAARKLAAMGFKVIGWSRSKRVIEGVETYDAAGLDAFLGRTDFLVGLLPLTPDTRGIFNAALFAKLSRNGPFGAPVFINAGRGGSQVEADILECLDSGVLGGASLDVFEREPLSPESRFWDMPNVYVTPHVAASSDVRALFVHVEHQIARFESGLPLEHVVDKVAGY
>NZ_CP021219.1|WP_010968391.1|1031119_1032748_+|ABC-transporter-ATP-binding-protein
MTDTLLSVRDLSVAFHQGGETSLAVDRISFDIKRGETVALVGESGSGKSVSANSILKLLPYPAASHPSGEILFNGKDLLKASDDELRHVRGNDVTMIFQEPMTSLNPLHTIEQQIGEILEIHQDLKGAAARARTLELLEQVGIREAEKRLGAYPHQLSGGQRQRVMIAMALANRPELLIADEPTTALDVTVQAQILELLKSLKDEHGMSMLFITHDLGIVRKIADRVCVMTKGKIVETGPTAEIFANPQHAYTRHLLASEPRGEPPPSDASRPIVIEAKDMKVWFPIKAGFLRRVVDHVKAVDGIDLTLRAGQTLGVVGESGSGKTTLGLALTRLISSKGRIAFVGEDIDAYSFREMRPLRNRMQVVFQDPYGSLSPRMSIADIIGEGLKIHEKALTDGERDQRVAAALEEVGLDPATRWRYPHEFSGGQRQRIAIARAMVLKPQFVMLDEPTSALDMSVQAQVVDLLRDLQRKHNLAYLFISHDLRVVRALANEVIVMRLGKVVEQGPAERIFEAPTEDYTKALMAAAFNLEAVNLAAVHQ
>NZ_CP021219.1|WP_003531959.1|1029977_1031111_+|ABC-transporter-permease
MSTATAYAGAPEKGWLTPIGRRRWQNFKANRRGYWSLWLFLLLFGLSLFAEFIANDKPILASYKGEILVPVLFDYPEEKFGGFLAETDYRSDFIRDEIGANGWMIWPPIRYSYQTVNSSIPHSAPTPPFWLMSEEERCSAYPQGADDPGCIAGNLNWLGTDDQARDVMARMIYGFRISVLFGLALTIASAVIGVSAGAVQGYFGGWTDLLMQRFIEIWSSMPVLYILLIIAAILPPGFFILLGIMLLFSWVGFVGVVRAEFLRARNFEYVNAARALGVGNGTIMYRHLLPNAMVATLTFLPFILSGSITTLTSLDFLGFGMPPGSPSLGEMIAQGKSNLQAPWLGLTAFFAMSIMLSLLIFVGEATRDAFDPRKTFR
>NZ_CP021219.1|WP_003531958.1|1028895_1029978_+|microcin-C-ABC-transporter-permease-YejB
MGAYILRRLLLMIPTIVGIMAISFAVVQFAPGGPVEQVISDLTNAAGSDRLSGNAGDLMPVGGGDGGQYRGAQGLDPDFIAKLEKQFGFDKPPLERFVTMMWDYMRFDFGESFFRNTPVIDLIIQKMPVSISLGVWILIFSYAISIPLGIKKAVSDGSTFDVWTSGVIIVGYAVPSFLFGILLIVLFAGGSFFDWFPLRGLVSDNFDQLSWYEKIIDYFWHMTLPLITLLLSAFATTTLLTKNSFIDEIKKQYVTTARAKGLTERRVLYGHVFRNAMLIIIAGFPGAFISAFFTGSLLIEYIFSLDGLGRLGYDAVVKRDYPIVFATLFIYSLMGLVVSLVSDLIYTWVDPRIDFERRDV
>NZ_CP021219.1|WP_003531957.1|1026855_1028715_+|ABC-transporter-substrate-binding-protein
MPNFCRTVKPGLAASLLTAALLLLPPASNAEEQPVWHHATSSIGEPKYKDGFARFDYVNPDAPKGGELRLSESGTFDSFNPILAKGEVATGVSSLVFETLLKSAEDEITTSYGLLAEGISYPDDISSATFRLRAEAKWADGKPVTPEDVVFSFDMVKEHNPLFSNYYRHVISAEKTGERDVTFRFDEKNNHELPNILGQFPILPKHWWEGQDAKGSKRDISRTTLEPVMGSGPYKIASFQAGGSIRFELRDDYWGKDLNVNVGRYNFRTINYAFFSDRSVQFEAFRAGNVDFYQDNSASHWATAYDFPAMKDGRVIREEIENPLRATGIMQAFVPNMRREKFKDQRVRQALNYAFDFEDLNRSLAHNAFQRVDSYFWGTELASSGLPEGREKEILEELKDKVPAAVFTTPYKNPVNGDPQKVRDNLRKALALFKEAGYELKGSRLVNAKTGEPFSFEILLSNPTFERTVTPFVNSVRKIGIDARIRTVDDSQYTNRVRSYDYDMIYGIWAQTLVPGNEQSDYWGSASVNQPGSRNYAGIADPAIDELIRRIVFAPNREELVATTRALDRVLLAHHYVVPLFYSKALRVAYWNHLARPKELPYYGMDFPDAWWSKNTAAK
>NZ_CP021219.1|WP_010968392.1|1025496_1026564_-|penicillin-insensitive-murein-endopeptidase
MKFDARAALRRCGSTVLALIMGVSLVSAEAAANDAPPAKELFGAKDLPMQAAPASFGFYSKGCLAGGVAIPTDGPTWQAMRLSRNRRWGHPAMIALIERFSHDAVEKIGWPGLLLGDISQPRGGPMLSGHASHQIGLDADIWLTPMPQRTLSYQERETISATSMLDKSKFLTVDPSIWTPSHARLIMMAASYPQVERVFVNPAIKKKLCDTWRGDRAALGKVRPIYGHDYHFHIRIKCPPGSKGCKDQAVVPAGDGCDKSLAWWFTDEPWAKPKQKPGAKPPKPKFAKLADLPKACALVLNGPAPASEQEATYGTAYRAPAAIPAAATSIEAVIEAAGEAPLANIPVPSPRPGLQ
>NZ_CP021219.1|WP_003531955.1|1024995_1025376_-|methylglyoxal-synthase
MADRKCLALIAHDQKKDDLAAFAKANEAVLSKWKIVATGTTGGRVLDVCPALDIVRLKSGPLGGDQQIGALIATGDVDCLIFFVDPLTAMPHDVDVKALMRLAIVYDIPMALNRATAEQLIDFRRN
>NZ_CP021219.1|WP_013844980.1|1023914_1024934_-|glucokinase
MPNASEHSFPFPILIGDIGGTNARFALLTDAYGEPKQLAPIRTGDFATIEEAMQKGILDKTSVQPRSAILAVAGPIKGDEIPLTNAGWVIRPKDMLASLGLEDVLVINDFEAQALAIAAPADQDVVQIGGGAVRPFHSRVVLGPGTGLGVAGLVYAQHTWIPVPGEGGHVDIGPRTERDFRIWPFLEPIEGRMAGEQILCGRGIMNLYRAVCAANGEEAVLADQAAVTTSALSGADAAAVETVSLFATYLGRVAGDMALIFMARGGVFLAGGISQKILPALTKPEFRAAFEDKAPHSALMRTIPTFAVIHPMAALSGLAAFARTPRDFGVAMEGRRWRR
>NZ_CP021219.1|WP_010968394.1|1022000_1023806_-|ABC-transporter-ATP-binding-protein
MNAKDRNKRAVDSETITGILKRVIAENGRDHIRGYAFAIACLVVVAATTGFTAWIMEAVVNEAFANRRADIVLLICGAIFAAFVLRGLATYGQAVALSKIGNNIVARYQRRLYAHLMALSVGYFHEHRSAQLAAKVSQNVSGIRDVLNMTVTSIARDLLTLIGLVVVMFSKDWLLSLIVFFVAPPLLLGLRYISRRLRLATREAVEVNSRVLGAMQETIQGITIVKAFTMENELRRKVESIIDRAENRANRIARLSERTAPMTETFAGLAISSVLAYAAFRTIYHNVPPGAFFAFVTALLMAYDPARRLARLQVSMERAAVNARMIYEILDTVPHQRDRPDATELRLGEATVELRDVRFAYGTGEEILKGVSFRAEGGKTTALVGPSGAGKSTIISLIPRFYDPLSGEILIDGQNIAGVTKQSLRAGLAYVSQQPYLFEGSIRDNIRYGRPDATDAEIEEAARLAYAHDFILAQPQGYDTPVGEHGVTLSGGQRQRLSIARALVRNAPVLLLDEATSALDTESEAAVQKALEEAMSGRTVIVIAHRLSTVVNADKIVVMKEGIVVEEGSHEELARRPDGLYARLHNLQGSGADTVAEAQIL
>NZ_CP021219.1|WP_010968395.1|1021164_1021983_-|4-hydroxy-tetrahydrodipicolinate-reductase
MNETDMKLVVVGAAGRMGQTLIRIIHETAGVRLHAAIERTGSPFIGRDAGELAGAGPMGVAVTDKPLEAFVEAEGVLDFTAPAATVEFAGLAAQARIVHVVGTTGCSADDEARIRAAARHARVIKSGNMSLGVNLLGVLTEKAARALPAGGWDIEILEMHHKHKVDAPSGTALLLGEAAARGRGIDLADHSVRVRDGHTGARPEGSIGFATLRGGSVIGEHSVVIAGEGEMVTLSHSATDRSIFARGAVAAALWGRSRKPGFYSMLDVLGLD
>NZ_CP021219.1|WP_010968389.1|1033954_1034809_-|C40-family-peptidase
MPEVLDRRLNAYREDIAEARLRGLVEAKRFVEGTPAAVSVPVTPLRARPEAGCGTDTELLYGETVRVLDVADGWAWVRSDLDGYVGYVPENVVQPPQAPATHLVAVPRTFVYRGADLRFPQAFALSMGSRIAVVGEAETRGTRYFLLDGGLAIVADHCIPAAGALTEDYVAIAARFLETPYLWGGRSGFGIDCSGLVQLAMQMAGRNAPRDSDMQASGLGRAIEREELTRGDLVFWKGHVAIMEDEKTLLHANGHTMTVAREGLEDAIRRIGWLYAQPTGYRRP
>NZ_CP021219.1|WP_003537743.1|1034817_1035162_-|winged-helix-turn-helix-transcriptional-regulator
MPVELTPSQALGLWHAVSLEQVRVDSRDLTLRQMAILLQIYLVPPPHTVRGLAASLGVTKPVITRALDTMGALGLVDRIRDERDRRNVIIKRTVEGALYLEKFGDLIINQGRKM
>NZ_CP021219.1|WP_013844979.1|1035249_1036641_-|leucyl-aminopeptidase
MAPFQFIERQSPFNTSNGKTLPIFAVTPAHIETGSIDPIALDWAKKAGFKAESGAVLLIPSADGHLGGALFGLGANPSDAPFLTGKLARALPAGKWHIETAPLTANRLALGYGLGSYRFERYKSAKTDAPTLLIPADSDATDIKRQLAGVFLARDLINTPTNDMGPEALEAAFRALAAHYKADVSVISGEALLTENFPLVHTVGRASAEAPRLLEMRWGRKGHRKVTLVGKGVCFDTGGLDIKPAASMLLMKKDMGGAANVMGLALMIMDAKLKVDLRVIVPVVENSISANAFRPGDIYKSRKGLTVQIDNTDAEGRLILADALAYADEEKTDLVVDMATLTGAARVALGPDLPPFFTDDDDLARDLAEASLTVDDPVWRMPLYRGYDKDVSARIADLTNAPSGGMAGSITAALFLKRFVTNAKSWVHFDIFGWAQSERPHSPIGGEAQAIRALYHHIGRIAG
>NZ_CP021219.1|WP_010968387.1|1036771_1037581_+|tetratricopeptide-repeat-protein
MTMQDNFSFSLRRLATGVAVAMVALSLSACAGQQGRKELTTGSIPKLTRPVQSMNATELAAAAERIGQAYERNPKDREAGLNYANLLRMTGRNEQALAVMQQVAIYHPADREVLGAYGKAQAAAGQLEQALATISRAQTPDRPDWKLKSAEGAILDQLGRSAEARLRYREALDLKPNEPSVLSNLGMSYLLTKDLRTAETYLKSAASQPDAGSSVRQNLALAVGLQGRFQEAETIAGQELTSEQAEANVAYLRSVLSQQGAWKQLAKAD
>NZ_CP021219.1|WP_011970797.1|1037779_1038726_-|IS630-like-element-ISRm2011-2-family-transposase
MARPFSNDLRERVVDAVTGEGLSCRAAAKRFGIGISTAIDWVRRFRETGSAAPGQMGGHKPRKLSGPHRAWLLCRCRERDFTLHGLVAELSERGLKVDYRAVWTFVHEEGLSYKKKTLVASERERPDVARHRARWLKHCPGIDPARLVFIDETWTKTNMAPLRGWAPRGERLVGYAPFGHWNTMTFVAALRADRVSAPFILDGPINGERFRIYVQQVLVPELKAGDIVILDNLGSHKGQEIRAAIRKAGARLFFLPKYSPDLNPIEKLFAKIKHWLREAQARSRDAIHDELRHILQAVTPQECAAYFKEAGYERA
>NZ_CP021219.1|WP_003537933.1|1038892_1040056_-|IS4-like-element-ISRm16-family-transposase
MRFTPSIFAQLLKAIDRRSFQAIVDRHAGDAYDKCFTSWDHLVALIYAQLSATTSLRGLEASFNANSQHHYHLGSGRLMRSTLSDANRRRPVAVFAETFALLAGQLDRQTRREGTKMLRLIDSTPIPLGKLYDWAKSNGRIRGMKLHVVYDPKADCPGILDITDANVNDAQIGRTITIEKGATYVFDKGYCHYGWWTAIAEAGASFVTRPKTNMGLALVAERPVEQPQGDGFLVLEDSQVSLASKGDSKLPIGLRRVIVKRQDGDTITLLTNDLERSAVEIGQLYKDRWQIELLFRWIKQHLKIRKFLGNNDNAIRLQIFAAMIAYALLRIAARLARVPLPILRFTDLVTQCLFQRKSIAEIHKPPQVNPSRPKPRTIPNQMVFRYA
>NZ_CP021219.1|WP_014529989.1|1040284_1041268_-|type-II-secretion-system-F-family-protein
MAGWIETLTDPNILVAALVSMAVLATFYSLVAPLLERGDLAKRMKSVATEREQIRARERARLNAEATTGRASLRAQHNTSVREIVERLNLRKALVDDNTVNRLKTAGYRSQNALNTFLFARFCLPFLFLTVAVLYIFVLGNFADKPIMVRVSLAIGFAYVGFYAPNIFIANAISKRQQSIRRAWPDALDLLLICVESGVSMELAMRRVADEIAVQSPPLAEELVLTTAELSFLPERRIALENLGLRTGLDEVKSVTQALIQADRYGTPVAQALRVLAQESRDQRMTAAEKKAAALPPKLTVPMILFFLPVLVAVILGPAGIQVADKF
>NZ_CP021219.1|WP_010968385.1|1041275_1042286_-|type-II-secretion-system-F-family-protein
MFGIDITVLGLAGLVALAAAALAYGVLYPQIETEKKAEGRLRRVSASETDRTKIKAARDRVNEMSKRRKSVQDSLKELEKKQQEKSANTAPSMKKRLLQAGLSISLAQFYLFSALFGLFAFLVVLLAGAGLLIAAGVALIGAAGLPRWIVGSMVKRRCRKFLDEFPNSLDVMVRSIKSGLPLNDALRLIASDGQEPVRTEFRRVVESQQVGLNVPEACARMIHSIPLPEVNFFAIVIAIQAQAGGNLSEALGNLSKVLRERRKMKAKVSALSMEAKASACIIGALPFIVATLVYLTSPDYMMVLFTDPRGHIIMGASAVWMSIGIWVMRNMINFDI
>NZ_CP021219.1|WP_013844977.1|1042344_1043814_-|Flp-pilus-assembly-complex-ATPase-component-TadA
MFGKRGNEGPGKGGARGFSPAPPMPAVQPVPVERSAAPVLGETVAAPSRPQAAAPPQRRRAPRAEDYYDTKSQVFSALIDTIDLSQLSKLDIESAREEIRDIVNDIITIKNFAMSISEQEELLDDICNDVLGYGPLEPLLARDDIADIMVNGAGQIFIEVGGKVEESEIRFRDNGQLLSICQRIVSQVGRRVDESSPICDARLPDGSRVNVIAPPLAIDGTALTIRKFKKDKLTLEQLVRFGSITPEAAVLLQIIGRVRCNIVISGGTGSGKTTLLNCLTRYIDSTERIITCEDSAELQLQQPHVVRLETRPPNIEGEGEITMRDLVKNCLRMRPERIIVGEVRGPEVFDLLQAMNTGHDGSMGTIHANTPRECLSRMESMIAMGGYTLPARTVREIISGSVDVIIQASRLRDGSRRITHITEVTGMEGDVIITQDLMRYEIDGEDANGRIVGRHVSTGIGRPHFWDRARYFNEDKRLAATLDAMEKQQ
>NZ_CP021219.1|WP_010968383.1|1043875_1045162_-|transcriptional-regulator
MNAIEYTIDSGGTGDWPADGTRPGDLEQLRPLPRISIHAFCESEAVQRLMERCGQDRRMAKVSLRVTGGGIAAAANTFAGASTPNLIILETATEPGALLSELAPLAEVCDPSTRVIVIGRHNDIALYRELIRNGISEYMVAPVGMADMLSAVSAIFVDPEAEPLGRSLAFIGAKGGCGSSVIAHNCAWGISNLFSTETILADLDLPYGTANIDFDQDPPQGIAEAVFAPERLDEVFLDRLLTRCSEHLSLLAAPSMLDRAYDFETGAFQPILEILQRSAPVSVLDLPHGWTDWTRSVLSAADEVVITAAPDLASLRNAKNLLDALKKLRPNDKVPHLVLNQVGVPKRPEIAPDEFCASLEIEAAAIIPFDAVLFGNASNSGRMIAEIDRKSPAAETFAQLSHLLTGRTAIKKARRGGLGKVLAKLGRR

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Crispr_ID: NZ_CP021219_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP021219_2

2995453-2995565

Orphan

Consensus_repeat	Method
ATTCCTGTGACGAGCACAGGAATGAGGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP021219_2

>merge|NZ_CP021219|2|2995453-2995565|CRISPRCasFinder
ATTCCTGTGACGAGCACAGGAATGAGGGAGGCGGGGATGCACGGCCTGCGAGAAGTATTCCGATGGACCGTACCCTCTCTGCCTCATTCCTGTGACAAGCACAGGAATGAGGG

>NZ_CP021219|2|2|2995453-2995565|CRISPRCasFinder
ATTCCTGTGACGAGCACAGGAATGAGGG	AGGCGGGGATGCACGGCCTGCGAGAAGTATTCCGATGGACCGTACCCTCTCTGCCTC
ATTCCTGTGACAAGCACAGGAATGAGGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP021219.1\|WP_010969512.1\|2999563_3000391_+\|TolB-family-protein	unknown	unknown	gnl\|CDD\|223893
NZ_CP021219.1\|WP_010969518.1\|2991445_2991841_+\|GFA-family-protein	unknown	unknown	gnl\|CDD\|226314
NZ_CP021219.1\|WP_014529457.1\|2992906_2994640_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227002
NZ_CP021219.1\|WP_003534093.1\|2995690_2997610_-\|LTA-synthase-family-protein	unknown	unknown	gnl\|CDD\|224287
NZ_CP021219.1\|WP_013844508.1\|3000401_3001424_-\|LacI-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380530
NZ_CP021219.1\|WP_010969521.1\|2983927_2985823_+\|murein-L,D-transpeptidase	unknown	unknown	gnl\|CDD\|225536
NZ_CP021219.1\|WP_003534108.1\|3007008_3007746_-\|autoinducer-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|99777
NZ_CP021219.1\|WP_010969508.1\|3004205_3004889_+\|5,6-dimethylbenzimidazole-synthase	unknown	unknown	gnl\|CDD\|380321
NZ_CP021219.1\|WP_003535070.1\|2989936_2991310_+\|3-deoxy-7-phosphoheptulonate-synthase-class-II	unknown	unknown	gnl\|CDD\|366662
NZ_CP021219.1\|WP_014529459.1\|3003086_3003908_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|180462
NZ_CP021219.1\|WP_010969519.1\|2988312_2989704_+\|glutathione-disulfide-reductase	unknown	unknown	gnl\|CDD\|213618
NZ_CP021219.1\|WP_003535074.1\|2987565_2988108_+\|DUF2059-domain-containing-protein	unknown	unknown	gnl\|CDD\|225725
NZ_CP021219.1\|WP_013844511.1\|2991862_2992801_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021219.1\|WP_010969520.1\|2985855_2986539_-\|phosphoglycolate-phosphatase	unknown	unknown	gnl\|CDD\|237310
NZ_CP021219.1\|WP_013844507.1\|3004912_3006040_-\|DUF2865-domain-containing-protein	unknown	unknown	gnl\|CDD\|371363
NZ_CP021219.1\|WP_003534106.1\|3006207_3006852_-\|autoinducer-synthase	unknown	unknown	gnl\|CDD\|226430
NZ_CP021219.1\|WP_010969510.1\|3001521_3002715_+\|phytanoyl-CoA-dioxygenase-family-protein	unknown	unknown	gnl\|CDD\|227609
NZ_CP021219.1\|WP_010969515.1\|2994641_2995064_-\|pilus-assembly-protein	unknown	unknown	gnl\|CDD\|227296
NZ_CP021219.1\|WP_003535076.1\|2986758_2987454_+\|ribose-5-phosphate-isomerase-RpiA	unknown	unknown	gnl\|CDD\|234816
NZ_CP021219.1\|WP_010969513.1\|2997878_2999561_+\|NAD+-synthase	unknown	unknown	gnl\|CDD\|237577

Protein	Function_ID	Function_description	E-value
NZ_CP021219.1\|WP_010969512.1\|2999563_3000391_+\|TolB-family-protein	gnl\|CDD\|223893	COG0823, TolB, Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion].	1.73907e-62
NZ_CP021219.1\|WP_010969518.1\|2991445_2991841_+\|GFA-family-protein	gnl\|CDD\|226314	COG3791, COG3791, Uncharacterized conserved protein [Function unknown].	6.93053e-44
NZ_CP021219.1\|WP_014529457.1\|2992906_2994640_-\|hypothetical-protein	gnl\|CDD\|227002	COG4655, COG4655, Predicted membrane protein [Function unknown].	0
NZ_CP021219.1\|WP_003534093.1\|2995690_2997610_-\|LTA-synthase-family-protein	gnl\|CDD\|224287	COG1368, MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily [Cell envelope biogenesis, outer membrane].	7.21123e-140
NZ_CP021219.1\|WP_013844508.1\|3000401_3001424_-\|LacI-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|380530	cd06307, PBP1_sugar_binding, periplasmic sugar-binding domain of uncharacterized transport systems. Periplasmic sugar-binding domain of uncharacterized transport systems that share homology with a family of pentose/hexose sugar-binding proteins of the type 1 periplasmic binding protein (PBP1) superfamily. The members of this group are predicted to be involved in the transport of sugar-containing molecules across cellular and organellar membranes.	1.08222e-88
NZ_CP021219.1\|WP_010969521.1\|2983927_2985823_+\|murein-L,D-transpeptidase	gnl\|CDD\|225536	COG2989, COG2989, Uncharacterized protein conserved in bacteria [Function unknown].	0
NZ_CP021219.1\|WP_003534108.1\|3007008_3007746_-\|autoinducer-binding-domain-containing-protein	gnl\|CDD\|99777	cd06170, LuxR_C_like, C-terminal DNA-binding domain of LuxR-like proteins. This domain contains a helix-turn-helix motif and binds DNA. Proteins belonging to this group are response regulators; some act as transcriptional activators, others as transcriptional repressors. Many are active as homodimers. Many are two domain proteins in which the DNA binding property of the C-terminal DNA binding domain is modulated by modifications of the N-terminal domain. For example in the case of Lux R which participates in the regulation of gene expression in response to fluctuations in cell-population density (quorum-sensing), a signaling molecule, the pheromone Acyl HSL (N-acyl derivatives of homoserine lactone), binds to the N-terminal domain and leads to LuxR dimerization. For others phophorylation of the N-terminal domain leads to multimerization, for example Escherichia coli NarL and Sinorhizobium melilot FixJ. NarL controls gene expression of many respiratory-related operons when environmental nitrate or nitrite is present under anerobic conditions. FixJ is involved in the transcriptional activation of nitrogen fixation genes. The group also includes small proteins which lack an N-terminal signaling domain, such as Bacillus subtilis GerE. GerE is dimeric and acts in conjunction with sigmaK as an activator or a repressor modulating the expression of various genes in particular those encoding the spore-coat. These LuxR family regulators may share a similar organization of their target binding sites. For example the LuxR dimer binds the lux box, a 20bp inverted repeat, GerE dimers bind two 12bp consensus sequences in inverted orientation having the central four bases overlap, and the NarL dimer binds two 7bp inverted repeats separated by 2 bp.	3.50703e-21
NZ_CP021219.1\|WP_010969508.1\|3004205_3004889_+\|5,6-dimethylbenzimidazole-synthase	gnl\|CDD\|380321	cd02145, BluB, 5,6-dimethylbenzimidazole synthase. BluB catalyzes the O2-dependent conversion of FMNH2 to 5,6-dimethylbenzimidazole (DMB), a component of vitamin B12; is is a subfamily of the nitroreductase family; nitroreductases typically reduce their substrates by using NAD(P)H as electron donor and often use FMN as a cofactor.	4.8092e-111
NZ_CP021219.1\|WP_003535070.1\|2989936_2991310_+\|3-deoxy-7-phosphoheptulonate-synthase-class-II	gnl\|CDD\|366662	pfam01474, DAHP_synth_2, Class-II DAHP synthetase family. Members of this family are aldolase enzymes that catalyze the first step of the shikimate pathway.	0
NZ_CP021219.1\|WP_014529459.1\|3003086_3003908_+\|SDR-family-oxidoreductase	gnl\|CDD\|180462	PRK06198, PRK06198, short chain dehydrogenase; Provisional.	1.03274e-164
NZ_CP021219.1\|WP_010969519.1\|2988312_2989704_+\|glutathione-disulfide-reductase	gnl\|CDD\|213618	TIGR01424, Glutathione_reductase_cytosolic, glutathione-disulfide reductase, plant. The tripeptide glutathione is an important reductant, e.g., for maintaining the cellular thiol/disulfide status and for protecting against reactive oxygen species such as hydrogen peroxide. Glutathione-disulfide reductase regenerates reduced glutathione from oxidized glutathione (glutathione disulfide) + NADPH. This model represents one of two closely related subfamilies of glutathione-disulfide reductase. Both are closely related to trypanothione reductase, and separate models are built so each of the three can describe proteins with conserved function. This model describes glutathione-disulfide reductases of plants and some bacteria, including cyanobacteria. [Energy metabolism, Electron transport].	0
NZ_CP021219.1\|WP_003535074.1\|2987565_2988108_+\|DUF2059-domain-containing-protein	gnl\|CDD\|225725	COG3184, COG3184, Uncharacterized protein conserved in bacteria [Function unknown].	3.19008e-64
NZ_CP021219.1\|WP_010969520.1\|2985855_2986539_-\|phosphoglycolate-phosphatase	gnl\|CDD\|237310	PRK13222, PRK13222, N-acetylmuramic acid 6-phosphate phosphatase MupP.	2.43772e-103
NZ_CP021219.1\|WP_013844507.1\|3004912_3006040_-\|DUF2865-domain-containing-protein	gnl\|CDD\|371363	pfam11064, DUF2865, Protein of unknown function (DUF2865). This bacterial family of proteins has no known function.	1.21353e-30
NZ_CP021219.1\|WP_003534106.1\|3006207_3006852_-\|autoinducer-synthase	gnl\|CDD\|226430	COG3916, LasI, N-acyl-L-homoserine lactone synthetase [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism].	1.55042e-97
NZ_CP021219.1\|WP_010969510.1\|3001521_3002715_+\|phytanoyl-CoA-dioxygenase-family-protein	gnl\|CDD\|227609	COG5285, COG5285, Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin [Secondary metabolites biosynthesis, transport, and catabolism].	4.07293e-103
NZ_CP021219.1\|WP_010969515.1\|2994641_2995064_-\|pilus-assembly-protein	gnl\|CDD\|227296	COG4961, TadG, Flp pilus assembly protein TadG [Intracellular trafficking and secretion].	2.76293e-23
NZ_CP021219.1\|WP_003535076.1\|2986758_2987454_+\|ribose-5-phosphate-isomerase-RpiA	gnl\|CDD\|234816	PRK00702, PRK00702, ribose-5-phosphate isomerase RpiA.	8.21528e-117
NZ_CP021219.1\|WP_010969513.1\|2997878_2999561_+\|NAD+-synthase	gnl\|CDD\|237577	PRK13981, PRK13981, NAD synthetase; Provisional.	0

>NZ_CP021219.1|WP_010969515.1|2994641_2995064_-|pilus-assembly-protein
MSVFNRLLASRKGAAAIEFAIIAPLFFMCVLTLIAYGIYLSAAHSIQQVAADAARTAIAGLSLEERERLATDYIRRTTMNQTFIDSSRMNVTVRDDANNTNQFTVTISYDASDLPIWKLFTFALPGEQIERYATIRVGGI
>NZ_CP021219.1|WP_014529457.1|2992906_2994640_-|hypothetical-protein
MHGATTAFRRCLKSRTGNIGVSAALVMPLVVASMGLGIDYGYLTLQRRELQSVADLASIAAAADVSSAEEAVLAHFRSNDLGFAVSTPSGLMTVDGKLLPNDVETAAKGVATIVRGRYVPDPAIDAGQRFIRGALPADAVQVTLEKKGDIYLAALFSEPPDLSVIGTAASSKIAAFSVGSRLASLNGGLLNAILGQMLGTNIALKVMDYEALIDADIDIQPFLKIIATRLSLTAASYEDVLTAELTVPQLLGSLRLVQGLSGTVTSALKTVELATAGNKQTLTLAQILNIDPKKSLGVDAGSDWAMKVSALQIVSAAAVIANGEHQIALDAVAGLPGIASVKVRLAIGEPPLETPSHRLGSPGAAVRTAQTRLAVEVVIDGLAALAGTRIRLPIYVELAHAEAKQSDIRCYGGTPENAAVIIDAVPGVAEIALGDVDPTVLSSFSSDARVTRARLLDGLIKIDGIAHVESKNLQPSRLAFSPAEVSSRTIKSVSTRDILSSTTRTLLGNLDAQINVGGLLSIGSPTLLQQALAQTLGAVTAPVDQLLYNLLLLVGVRVGEADVRVTGVKCQRPVLVQ
>NZ_CP021219.1|WP_013844511.1|2991862_2992801_-|hypothetical-protein
MPPAQEWGHAQQMQRVAEKGSSEQQVPTGLTVGDLVRNPNFPQILQAGARTLIALNDLFPRVARLVASHQKWMLTQAAYSLHLERDVNNPESGITAARLLKFMRDTGGASRNTAAAFLAELVAYKMLQPASGGRTKRARPLEPTEVSETAMRLWFKSQMSTIDLLDGGTRVERVEADKSIFERAQPLAARRLLSDSRWTTPPKGVAIFVWSESGGVILDDLMTRVSEFAPMDGKVWVEVSLAKLAEHYLISNTHVRRIFARADAAGFLGKSEDGRRGRFWLSARLIEEYVSWQAVKIEALASAYDQASDWAA
>NZ_CP021219.1|WP_010969518.1|2991445_2991841_+|GFA-family-protein
MEINEGGCLCGAVRFKTRGKLRELIFCHCSQCRKQTGLYYAATNVLDREMEVEGVENVTWYRSSNEARRGFCRYCGSALFWKADGLDYTSILAGTFDGSVALEPGYHIFCADKGHYYDISDDLPRFAGSRP
>NZ_CP021219.1|WP_003535070.1|2989936_2991310_+|3-deoxy-7-phosphoheptulonate-synthase-class-II
MAQTWTPNSWRQKPIQQVPDYPDLAVLDSVEARLAKYPPLVFAGEARRLKSALANVAEGRGFLLQGGDCAESFAEHGADTIRDFFRAFLQMAVVLTFGAQQPVVKVGRIAGQFAKPRSSGVEKQGDVTLPSYRGDIINGIEFTEEARVPNPERQVMAYRQSAATLNLLRAFAMGGYANLENVHQWMLGFVKDSPQAERYRKLADRISETMDFMKAIGITAENHPSLRETDFFTSHEALLLGYEQALTRVDSTSGDWYATSGHMIWIGDRTRQPDHAHIEYCRGIKNPLGLKCGPSLTADGLLELIDILNPANEAGRLTLICRFGHDKVAEHLPRLIRAVEREGKKVVWSCDPMHGNTITLNNYKTRPFERILSEVESFFQIHRAEGSHPGGIHIEMTGNDVTECTGGARALSGDDLADRYHTHCDPRLNADQALELAFLLAERMKGGRDEKKMVVNG
>NZ_CP021219.1|WP_010969519.1|2988312_2989704_+|glutathione-disulfide-reductase
MSAFDYDLFVIGGGSGGVRSGRLAAALGKKVAIAEEFRYGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGWTVGESRFDWAKLVAAKEQEIARLEGLYRKGLANAGAEILDTRAELAGPNTVKLLASGKTVTAERIVIAVGGHPSPHDALPGHELCITSNEAFDLPALPESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEILSRFDQDMRRGLHAAMEEKGIRILCEDIIQSVSADADGRRVATTMKHGEIVADQVMLALGRMPNTNGLGLEAAGVRTNELGAIIVDAFSRTSTPGIYALGDVTDRVQLTPVAIHEAMCFIETEYKNNPTSPDHDLIATAVFSQPEIGTVGITEEEAARKFQEIEVYRAEFRPMKATLSGRKEKTIMKLVVNAADRKVVGAHILGHDAGEMAQLLGISLRAGCTKDDFDRTMAVHPTAAEELVTMYQPSYRVRNGERVG
>NZ_CP021219.1|WP_003535074.1|2987565_2988108_+|DUF2059-domain-containing-protein
MNKFAGLARTFATAAILVSVSVPAVRAQDVTEDQIKAARATIAALGVTNSFDNILPNLAERLKNTLIQASPNHQELITATVDEKALSLAGRRSDLEREAATIYAKTFTVEELNAIADFYNSTAGKKLLNDGPIASREMLKAADIWAAGVSRDLTSEATKSLDEKIGNAPAANAGAAAPAQ
>NZ_CP021219.1|WP_003535076.1|2986758_2987454_+|ribose-5-phosphate-isomerase-RpiA
MDARQMKIKAAEAALEHVESGMRLGIGTGSTAEEFVRLLAEKVASGFQISGVPTSERTARLCLELGVPLKSLDELPELDLTIDGADEVDGKLRLIKGGGGALLREKIVASASTRMIVIADESKVVDVLGAFKLPIEINPFGQVATRLAIEKTASRLGLAGEIVVRSSGDGVFMTDGGHLILDASFGRIPDADALAVELNAIPGVVEHGLFIDVASMAIIAGPEGARTLTAS
>NZ_CP021219.1|WP_010969520.1|2985855_2986539_-|phosphoglycolate-phosphatase
MSLPLVVFDLDGTLVDTAPDLVASLNHAVTQAGIEPVTYADLTHLVGHGARAMIERTFALRGRTIAEEELTWQMKEFVDFYHGSMPGESLPYPGLIEALDRLQDAGLKLAVCTNKPEMLAKRLLEGLGLLGRFAAISGGDTFTVRKPHADHLLSTVSNAGGMAERAVMVGDSLNDVLVARNASVPSIVVPFGYSDVPIESLLPDRIIGHFDELTPDLVETVLSRKPK
>NZ_CP021219.1|WP_010969521.1|2983927_2985823_+|murein-L,D-transpeptidase
MRIIKSAAIVTLMSGCVVATMDVQPASAITFMDFIRGGKKRDVQEQVQPRRQLPGVDMFAPQRLDQKAAKPPRITGPRYYTYKAEPLRRIATDRLVDPVVTGSVLNGALPPMLRSPLADARQFLPEVDVRAPAEVAKAVENFYGTRTDFLWIEGTGVSGRAKAALGVLSDAAKVGLDPLDYAVIVPPEDFDRGDMIAREKDLVRFEIAMSAAVLTYVQDTVRGRIDPNRISGYHDFKRKNVDLLGFLEKIETSSDVAALVESQNPKSAQFTALRQELERLRTQVEAAPRVEIAPGTLLKPGESNPELANVIAGIKLKASEALKTEHAVVLAAYEGTPDYTPELVPLVEAFQKEYGLKADGIVGQASIRALTGGDTTQGKIDKVEIAMEQARWLPDGLGDRYVFINQPAFTASYTEQGTEQFSMRVVVGSKANQTYFFQDEIQTVEVNPYWGVPQSIIVNEMLPKLRNDPGYLDRMGYQVEVGGRVVPSTAVNWYGSTNSIAVRQPPSSDNALGELKILFPNAHAIYMHDTPSKSFFKRDQRALSHGCVRLADPRRMAAAVLGVSVDEVGMEISGGRNKALPVSAKVPVYVSYFTAWPNKDGTVEYFDDVYERDMYMNRAFEATRKARSLEG
>NZ_CP021219.1|WP_003534093.1|2995690_2997610_-|LTA-synthase-family-protein
MARIDSAVSSSQVYADGESSSARYTRTLSGARSALFTLLIAIALVFTVEVIVRWSWPDTVAYFADPMRPAWTTVAVFFLAMLGVDALFGREHKAALLIAPLAVVPAFISQQKQVFLSDPLYPTDFLFGRQIMELMPVLVKDRPWTAVGVVAGLIAAIVVGALLLRFAWQNFPKLTRRERLMRIAFALPLLVAFWNIMDYNQFSWIRDRLRVIPIMWDQTENYRHNGFALAFAINLPMANVNAPAGYMADAIDRIPVKPLPAGTTHRGKPDVIVLMSESFWDPTRLPKVKLTPDPMPTIRELQGGNVFSPEFGGMTANVEFEALTGFSNAFLPYGSIPYQQYIRNPIPSLATFFRGEGYVSRAIHPFQGWFWNRTAVYKAFGFDMFRSEENMPAMQKRGIFASDESLTKEIIRQADEVEDPFFFFAVTLQGHGPYEANRYAKNTIKVEGDLPEADRQVLATYAQGVKEADDSLKMLMDWAKERDRETIIVLFGDHLPPLNTVYSSTGYMKGITAERKGPKDQMKAEHETPLVVWSNKTGPKKNIGTISPAFLSYQILKQAGYEHPYYTGFLGKVYDHYRVLDRYMLIRKNGKDVADWLRQPKVPASLRDYRFLQHDMMFGKRYSTERFFKSHAELYSAGL
>NZ_CP021219.1|WP_010969513.1|2997878_2999561_+|NAD+-synthase
MTAQKAAPSTLRIAVAQLNPTVGDIAGNVAKAREARTAAAREGADLLLLTELFISGYPPEDLVLKPAFLKACEQAVEKLAAETADGGPGVVIGFPRQAAGLRHNSVAVLDGGRVIAIRDKVDLPNYGEFDEKRVFDAGEMPGPVNFRGVRIGIPVCEDIWGDLGVCETLAESGAEILLSPNGSPYYRGKVDVRHQVVLRQVIETGLPMIYANQLGGQDELVFDGASFAFNADKSLAFQMSQFEEAVAVSEWKRGAGGWISANGLKSRIPEGEEADYRACMLGFRDYVNKNGFRNVVLGLSGGIDSAICTALAVDALGEERVRTVMLPYRYTSRESLRDAEACAKALGCRYDIVAIEEPVEGFLSALADTFEGTEAGITEENLQSRTRGTILMAISNKFGSMVVTTGNKSEMSVGYATLYGDMNGGFNPIKDLYKMQVYALARWRNGTVPPGALGPSGEVIPQNIIDKAPSAELRPDQTDQDSLPPYPVLDDILECLVEKEMSTEEIVARGHEEATVHRIEHLLYIAEYKRRQSAPGVKITRKNFGRDRRYPITNRFRDRG
>NZ_CP021219.1|WP_010969512.1|2999563_3000391_+|TolB-family-protein
MRSSVEIFDIATGETRVVWQTERLVEAPNWSPDGKFLIINGDGRLYRLGFDGSDPTEIDTGFARHCNNDHGISPDGSTLVISDKTEFGSSAIYLLPAEGGTPRLVTRNLPSYWHGWSPDGRMLAYCGIRDQVFDIYTIPVDGGEERRLTQGQGRNDGPDWSADGEWIYFNSSRTGRMQIWRVRPDGKDVQRITDSPYGDWFPHPSPDGRHLLVLSYDGDVFDHPRDLDVRLRLMDPDGGNARVLLELFGGQGTVNVPNWSPSGTAFAFVRYEPEE
>NZ_CP021219.1|WP_013844508.1|3000401_3001424_-|LacI-family-DNA-binding-transcriptional-regulator
MAHPFLVKDIAFQAGLSTATVDRVLNGRRGVRQQTVMRVNAAIRELERQQAGLEVQGRKYAVDVVMEAPERFTEAVRKAFESEAATFMPTVFRSRFHFAETMRPQDISQLLDRIRLRGTDGVVLKAPDVPEIAAAVARLENAGVAVVTLVTDLPHSSRTAYAGADNRAAGETAAYLIGERFADRPATVLVTISSSRFRGEEEREIGFRRVLREKYPHIGVVEISEGHGRNEETGALALKAIASHPEINAAYSIGGGNRAVLDAFGQLQRGCVLFVAHDLDEDNLDLLRQGLVQFVLHHDLKTDVRMAFHAVLERRGALRASEKRHLSAVEVITPYNLPRI
>NZ_CP021219.1|WP_010969510.1|3001521_3002715_+|phytanoyl-CoA-dioxygenase-family-protein
MKTDNPARARLERVWLNEAACDIEEFRAAVEHRVSLADYPHAADCQKNILIYDSARLAGDCATQDGRRSVLAEICEALATGPGVAVFKRAFTDTRVIDEASGIFNEIIEEQHRTNSGGGDHFAKPGANDRIWNSLEKHCLKNPENFAAYYGNAIIALVSEAWLGPNYQMTAQVNRVNPGGASQSPHRDYHLGFQTSAVIEQYPAHVHRLSPVLTLQGAVAHCDMPVESGPTLFLPYSQTYLPGYLALKRPEFRTYFEENHVQLPLEKGDVVFFNPALFHAAGSNRSAGIKRVANLLQVSSAFGRAMETVDREHMCVVLFPALKVLAAGGKLTQDEIANAVAACAEGYSFPTNLDRDPPVGGLAPRTQAQLMHEALAGEWSVEAFAEALADQAAKKLS
>NZ_CP021219.1|WP_014529459.1|3003086_3003908_+|SDR-family-oxidoreductase
MSTDHALLDGKIAIVTGGTQGLGATIAALFAERGAAGVVICGRNAAKGEAKAAEIAAATGSKVVYVPADLERVEDARAVAAACDRAFGRVDALVNAAAITDRGTILDTSPELFDRMFAVNVRAPFFLMQEVIKVMRREKTEGTIVNIGSMSAKAGQPFIAAYCASKGALETLTKNTAYAVLRNRIRVNGLNIGWMASEGEDRIQREYHDAPANWLEKAAASQPFGRLVDPAEVARACAYLSSAESGLMTGSVICFDQSIWGAYDASPHPEAPL
>NZ_CP021219.1|WP_010969508.1|3004205_3004889_+|5,6-dimethylbenzimidazole-synthase
MLPDPNGCLTAAGAFSSDERAAVYRAIETRRDVRDEFLPEPLSEELIARLLGAAHQAPSVGFMQPWNFVLVRQDETREKVWQAFQRANDEAAEMFSGERQAKYRSLKLEGIRKAPLSICVTCDRTRGGAVVLGRTHNPQMDLYSTVCAVQNLWLAARAEGVGVGWVSIFHESEIKAILGIPDHVEIVAWLCLGFVDRLYQEPELAAKGWRQRLPLEDLVFEEGWGVR
>NZ_CP021219.1|WP_013844507.1|3004912_3006040_-|DUF2865-domain-containing-protein
MSASPKVASKIRRIAAVLVPLALAAAGPAAASGVCERLSARLAGLPTGFTTNASLRDFTGAVSRQNIELRRAKNDRRRMECSSDSVVVIGGDDEAACAELDDTIARMEANLRQLKAQRRHLIGGGDDDVRRRILAAMELNGCSGAPREGWDAGSAEGQFASAADGTEVHRNILRDLPPDSGAYPLLLDAPRAELPLTDDDFAGSLRTMCVRTCDGAFFPISSHATPADFGRDADLCRARCPGAETELYYHVLATEEADQMVSATTGRPYTDLPTAFAYRARSVGSPGICGCGIPDPATDANGQKAVSAGKLTVVSPSVITIGSEKKAPAKPIAERPYDPAKNKVRVVGPTFLPQEESAIDLKHPLGPRYQPLQEN
>NZ_CP021219.1|WP_003534106.1|3006207_3006852_-|autoinducer-synthase
MIRIVNGNGRSQHPQAIDEMFRLRKRVFHDFLKWDVKTEGDWEIDHYDKANPLYVMSYSPDTGKIRGSLRLLPTLGPNMLDDTFPILLGDNPEIRSASVWESSRFCIDPEISQDRASNQVTIAAAELMCGVGEMSLASGISHIVTVTDVFLERMFRRMGCPGERIADPHRIGSVHAVAIAWEVSRNLLETMKAVASIEGTVLDRPMSLETARAA
>NZ_CP021219.1|WP_003534108.1|3007008_3007746_-|autoinducer-binding-domain-containing-protein
MANQQAVLNLLDIVEYGGCADPERFFALMRRTFNISHLLYLEAESLPDGLRICRLHHTFGAYAAEIYAARGLYRIDPILKLALGGVRPVEWATARRRFPECEPLFEAAEEIGLSTEGVALPLPSPAGRMALLAIGANMSPVEWSAYRRCHLRDFQLAANLFHASMLEHSAMAGALDERDLRLTGRETEVLTWSAAGKSYWEIATILGISERTVRFFMTNARRKLNVVSNTQAVAHAVRHALIPTI

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP021219_1	1.1\|1033773\|17\|NZ_CP021219\|CRISPRCasFinder	1033773-1033789	17	NZ_CP021219.1	2580168-2580184	1	0.941

1. spacer 1.1|1033773|17|NZ_CP021219|CRISPRCasFinder matches to position: 2580168-2580184, mismatch: 1, identity: 0.941

accgcccctcaccctaa	CRISPR spacer
actgcccctcaccctaa	Protospacer
**.**************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

515177 : 552713

Sinorhizobium_phage(69.7%)

tail,terminase,portal,integrase,head,capsid

attL 542825:542840|attR 555060:555075

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_017274118.1\|515177_517202_-\|tail	tail fiber domain-containing protein	A0A2L2R219	Sinorhizobium_phage	4.1e-51	30.9
WP_017274117.1\|517213_518728_-	hypothetical protein	A0A2D2W219	Sinorhizobium_phage	3.9e-256	84.2
WP_029727560.1\|518966_521714_-\|tail	phage tail protein	A0A291AUN1	Sinorhizobium_phage	7.6e-258	61.4
WP_017275184.1\|521720_522125_-	hypothetical protein	A0A291AUN0	Sinorhizobium_phage	7.1e-48	71.6
WP_013843999.1\|522196_522469_+	hypothetical protein	NA	NA	NA	NA
WP_028004752.1\|522615_523206_-	DUF2163 domain-containing protein	A0A291AUM8	Sinorhizobium_phage	2.0e-75	72.1
WP_028004751.1\|523202_523853_-	hypothetical protein	A0A291AUM9	Sinorhizobium_phage	4.3e-79	70.0
WP_029727561.1\|523852_525724_-\|tail	phage tail tape measure protein	A0A291AUM6	Sinorhizobium_phage	7.8e-222	69.3
WP_017265702.1\|526102_526297_-	hypothetical protein	A0A291AUN4	Sinorhizobium_phage	1.5e-19	74.2
WP_011975792.1\|526758_527169_-\|tail	tail protein	A0A291AUM5	Sinorhizobium_phage	3.7e-52	76.5
WP_017274986.1\|527261_527726_-	hypothetical protein	A0A291AUM4	Sinorhizobium_phage	8.8e-50	66.2
WP_029727562.1\|527727_528024_-	hypothetical protein	A0A291AUM3	Sinorhizobium_phage	4.6e-28	64.9
WP_028004747.1\|528026_528353_-	hypothetical protein	A0A291AUL9	Sinorhizobium_phage	1.2e-34	70.8
WP_028004746.1\|528349_528817_-	hypothetical protein	NA	NA	NA	NA
WP_013844546.1\|528892_529924_-\|capsid	major capsid protein	A0A291AUL7	Sinorhizobium_phage	3.5e-176	86.2
WP_013844547.1\|529951_530308_-\|head	head decoration protein	A0A291AUM0	Sinorhizobium_phage	1.5e-46	84.7
WP_013844548.1\|530310_530862_-	hypothetical protein	A0A291AUL6	Sinorhizobium_phage	1.1e-46	83.0
WP_028004745.1\|530887_531793_-	S49 family peptidase	A0A291AUM2	Sinorhizobium_phage	1.3e-145	86.4
WP_029727563.1\|531789_533514_-\|portal	phage portal protein	A0A291AUL8	Sinorhizobium_phage	8.9e-289	84.2
WP_028004743.1\|533510_533747_-\|head,tail	head-to-tail joining protein	A0A291AUL5	Sinorhizobium_phage	4.9e-25	78.2
WP_028004742.1\|533757_535800_-\|terminase	phage terminase large subunit family protein	A0A291AUK9	Sinorhizobium_phage	0.0e+00	89.2
WP_017274591.1\|535796_536438_-	hypothetical protein	A0A291AUL0	Sinorhizobium_phage	3.6e-54	58.2
WP_017274500.1\|536587_537334_-	hypothetical protein	A0A291AUL1	Sinorhizobium_phage	4.3e-115	83.5
WP_017267129.1\|537501_538296_-	hypothetical protein	R9TRT9	Rhizobium_phage	1.5e-52	44.8
WP_017273558.1\|538573_540382_-	DNA primase family protein	A0A0P0IX98	Lactobacillus_phage	6.2e-51	37.9
WP_017267131.1\|540383_541613_-	hypothetical protein	R9TNC4	Rhizobium_phage	7.6e-101	48.7
WP_013843977.1\|541609_541945_-	hypothetical protein	NA	NA	NA	NA
WP_013843976.1\|541944_542457_-	hypothetical protein	NA	NA	NA	NA
WP_017267132.1\|542470_542842_-	hypothetical protein	NA	NA	NA	NA
542825:542840	attL	NA	NA	NA	NA
WP_026030356.1\|542838_543108_-	hypothetical protein	R9TRS8	Rhizobium_phage	3.1e-07	76.3
WP_013843974.1\|543104_543284_-	hypothetical protein	NA	NA	NA	NA
WP_020493266.1\|543280_543559_-	hypothetical protein	NA	NA	NA	NA
WP_017267134.1\|543555_543807_-	hypothetical protein	NA	NA	NA	NA
WP_013843972.1\|544151_544361_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_013843971.1\|544443_545139_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_013843969.1\|545546_545783_+	hypothetical protein	NA	NA	NA	NA
WP_013843968.1\|545784_545985_+	hypothetical protein	NA	NA	NA	NA
WP_017267135.1\|545987_546668_+	hypothetical protein	R9TQJ1	Rhizobium_phage	1.9e-40	46.3
WP_017267136.1\|546671_547166_+	single-stranded DNA-binding protein	R9TP78	Rhizobium_phage	7.7e-44	57.9
WP_013843965.1\|547177_547597_+	DUF2312 domain-containing protein	Q8W6H2	Sinorhizobium_phage	9.4e-35	66.7
WP_013843964.1\|547596_547962_+	hypothetical protein	NA	NA	NA	NA
WP_017267137.1\|547954_549073_+	DNA polymerase III subunit beta	R9TRR6	Rhizobium_phage	1.9e-66	37.8
WP_017267138.1\|549082_549586_+	hypothetical protein	A0A218M329	Acidovorax_phage	1.6e-12	35.5
WP_017273560.1\|549582_549951_+	HNH endonuclease	A0A291AUJ4	Sinorhizobium_phage	3.8e-56	81.3
WP_017267140.1\|550129_551287_+\|integrase	site-specific integrase	A0A067XRF8	Caulobacter_phage	2.1e-07	29.1
WP_014528943.1\|551465_552713_-	adenylate/guanylate cyclase domain-containing protein	A0A1B1IWY2	uncultured_Mediterranean_phage	6.3e-18	31.2
555060:555075	attR	NA	NA	NA	NA

DBSCAN-SWA_2

904170 : 962457

Mycobacterium_phage(22.22%)

tRNA,integrase,transposase,terminase

attL 928380:928394|attR 958277:958291

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_088194165.1\|904170_905700_-\|transposase	IS21 family transposase	K4I413	Acidithiobacillus_phage	1.0e-118	43.4
WP_017275341.1\|905782_906106_+	hypothetical protein	NA	NA	NA	NA
WP_017267198.1\|906287_906866_+	hypothetical protein	NA	NA	NA	NA
WP_017267197.1\|906980_907616_+	recombinase family protein	G8I4U3	Mycobacterium_phage	7.4e-15	34.7
WP_020479373.1\|907648_908713_-	DUF4917 family protein	NA	NA	NA	NA
WP_017267195.1\|908837_910151_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_003534379.1\|911411_912047_+	trimeric intracellular cation channel family protein	NA	NA	NA	NA
WP_010968450.1\|912077_912500_-	transcriptional repressor	NA	NA	NA	NA
WP_010968449.1\|912877_913393_+	3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA	NA	NA	NA	NA
WP_003534376.1\|913442_914663_+	beta-ketoacyl-ACP synthase I	NA	NA	NA	NA
WP_003534375.1\|914667_915474_+	enoyl-ACP reductase FabI	NA	NA	NA	NA
WP_010969728.1\|915626_916703_+\|transposase	ISAs1-like element ISRm21 family transposase	NA	NA	NA	NA
WP_010969728.1\|916915_917992_+\|transposase	ISAs1-like element ISRm21 family transposase	NA	NA	NA	NA
WP_010968448.1\|918048_919065_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_014530011.1\|919144_921298_-	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA
WP_003534369.1\|921665_921935_-	30S ribosomal protein S15	NA	NA	NA	NA
WP_010968446.1\|922173_923892_-	sensor histidine kinase	NA	NA	NA	NA
WP_003534367.1\|924200_925136_-\|tRNA	tRNA pseudouridine(55) synthase TruB	NA	NA	NA	NA
WP_003534366.1\|925148_925556_-	30S ribosome-binding factor RbfA	NA	NA	NA	NA
WP_010968445.1\|925715_928385_-	translation initiation factor IF-2	A0A2H4UTS4	Bodo_saltans_virus	3.4e-21	24.6
928380:928394	attL	NA	NA	NA	NA
WP_003534364.1\|928490_929183_-	RNA-binding protein	NA	NA	NA	NA
WP_010968444.1\|929188_930817_-	transcription termination/antitermination protein NusA	NA	NA	NA	NA
WP_003534362.1\|930862_931480_-	ribosome maturation factor RimP	NA	NA	NA	NA
WP_010968443.1\|931702_933358_+	MFS transporter	NA	NA	NA	NA
WP_003533407.1\|933565_934804_-	lytic murein transglycosylase	NA	NA	NA	NA
WP_003533410.1\|934841_935447_-	recombination protein RecR	NA	NA	NA	NA
WP_003533411.1\|935497_936109_-	LysE family translocator	NA	NA	NA	NA
WP_003533413.1\|936184_936508_-	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA
WP_014527027.1\|936616_938497_-	DNA polymerase III subunit gamma/tau	A0A1U9WR94	Streptococcus_virus	3.7e-46	35.8
WP_013844995.1\|938756_939203_+	HIT domain-containing protein	NA	NA	NA	NA
WP_003533418.1\|939205_940186_+	NAD(+) diphosphatase	NA	NA	NA	NA
WP_010968439.1\|940192_940885_+	YafY family transcriptional regulator	A0A1B0RXM1	Streptococcus_phage	2.0e-13	28.6
WP_010968438.1\|940977_941346_+	VOC family protein	NA	NA	NA	NA
WP_003533421.1\|941477_941615_-	DUF1127 domain-containing protein	NA	NA	NA	NA
WP_003533422.1\|941785_942640_-	prephenate dehydratase	NA	NA	NA	NA
WP_014530010.1\|942664_943417_-	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA
WP_010968436.1\|943570_944350_+	cytochrome c family protein	NA	NA	NA	NA
WP_013844994.1\|944521_945619_+	branched-chain amino acid aminotransferase	NA	NA	NA	NA
WP_003533430.1\|945841_946786_-	AEC family transporter	NA	NA	NA	NA
WP_010968434.1\|946989_947259_+	BON domain-containing protein	NA	NA	NA	NA
WP_013844993.1\|947272_948199_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_010968432.1\|948329_949808_+	MFS transporter	A0A0M3UL24	Mycobacterium_phage	2.1e-28	29.5
WP_010968431.1\|949894_951055_-	FAD-dependent monooxygenase	NA	NA	NA	NA
WP_014530006.1\|953062_954337_-	MFS transporter	NA	NA	NA	NA
WP_010968428.1\|954445_955468_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_017264514.1\|955486_955708_-	hypothetical protein	NA	NA	NA	NA
WP_010968426.1\|955725_955890_+	type II toxin-antitoxin system HicB family antitoxin	NA	NA	NA	NA
WP_029728035.1\|956151_957453_+\|integrase	integrase arm-type DNA-binding domain-containing protein	A0A077KET4	Ralstonia_phage	5.4e-81	42.5
WP_148707586.1\|957449_957920_+	hypothetical protein	NA	NA	NA	NA
WP_029728033.1\|957993_958206_+	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_148707587.1\|958214_958469_+	hypothetical protein	NA	NA	NA	NA
958277:958291	attR	NA	NA	NA	NA
WP_080654694.1\|958502_960074_+	hypothetical protein	A0A2D1GN57	Marinobacter_phage	3.0e-49	39.8
WP_029728030.1\|960402_960648_-	hypothetical protein	NA	NA	NA	NA
WP_033052617.1\|961240_961516_-	hypothetical protein	NA	NA	NA	NA
WP_071221476.1\|961644_962457_+\|terminase	terminase small subunit	A0A2I7RB14	Vibrio_phage	1.0e-32	51.0

DBSCAN-SWA_3

1522681 : 1531035

Acidithiobacillus_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013844892.1\|1522681_1524463_-	PAS domain-containing methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	1.6e-11	47.1
WP_012477343.1\|1524754_1525492_-	ATP-binding protein	K4HZD4	Acidithiobacillus_phage	1.1e-57	47.5
WP_014531024.1\|1525504_1527034_-\|transposase	IS21 family transposase	K4I413	Acidithiobacillus_phage	2.7e-119	43.9
WP_003528560.1\|1527349_1527829_-	purine-binding chemotaxis protein CheW	Q56AR1	Bacillus_thuringiensis_phage	4.3e-07	24.0
WP_003528561.1\|1528006_1528930_-	arginase	A0A0N9R043	Chrysochromulina_ericina_virus	5.1e-25	32.3
WP_003528562.1\|1529085_1529520_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
WP_010970346.1\|1529728_1530208_+	VOC family protein	NA	NA	NA	NA
WP_010970345.1\|1530249_1531035_-	aminoglycoside 3'-phosphotransferase	Q75ZG1	Hepacivirus	5.2e-71	54.5

DBSCAN-SWA_4

1843324 : 1894946

Sinorhizobium_phage(33.33%)

tail,tRNA,portal,terminase,head,protease,capsid

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010970161.1\|1843324_1844686_+\|tRNA	tRNA lysidine(34) synthetase TilS	NA	NA	NA	NA
WP_003527585.1\|1844785_1846723_+\|protease	ATP-dependent zinc metalloprotease FtsH	A9YVR1	Ostreococcus_tauri_virus	7.3e-114	40.3
WP_003527581.1\|1847046_1848399_+	phosphoglucosamine mutase	NA	NA	NA	NA
WP_010970160.1\|1848846_1849674_+	porin family protein	NA	NA	NA	NA
WP_010970159.1\|1850822_1852001_+	phosphoserine transaminase	NA	NA	NA	NA
WP_014529888.1\|1852082_1853678_+	phosphoglycerate dehydrogenase	A0A2R8FCS0	Cedratvirus	7.7e-45	37.4
WP_010970157.1\|1853814_1854705_-	DMT family transporter	NA	NA	NA	NA
WP_003527570.1\|1854909_1856208_+	adenylosuccinate synthase	A0A0B5J049	Pandoravirus	2.9e-58	32.9
WP_010970156.1\|1856271_1858533_+	membrane protein	NA	NA	NA	NA
WP_003527567.1\|1858663_1859569_-	RNA polymerase sigma factor RpoH	A0A248SJA5	Salicola_phage	7.7e-34	32.2
WP_014529887.1\|1859766_1860798_-	RluA family pseudouridine synthase	NA	NA	NA	NA
WP_010970155.1\|1860827_1861211_+	hypothetical protein	NA	NA	NA	NA
WP_003527563.1\|1861215_1862043_+	RNA methyltransferase	NA	NA	NA	NA
WP_010970154.1\|1862273_1863356_-	hypothetical protein	NA	NA	NA	NA
WP_010970153.1\|1863504_1864107_-	DUF1134 domain-containing protein	NA	NA	NA	NA
WP_003527560.1\|1864474_1865137_+	histidine phosphotransferase	NA	NA	NA	NA
WP_026029688.1\|1865385_1865748_+	response regulator	NA	NA	NA	NA
WP_003527557.1\|1866122_1866824_-	response regulator transcription factor	F4YXP8	Roseobacter_phage	8.7e-17	48.1
WP_003527555.1\|1867374_1867725_+	hypothetical protein	NA	NA	NA	NA
WP_003527553.1\|1867897_1868179_-	N-acetyltransferase	NA	NA	NA	NA
WP_003527546.1\|1868329_1868605_-	DUF1153 domain-containing protein	NA	NA	NA	NA
WP_013844833.1\|1868791_1869757_+	LuxR family transcriptional regulator	A0A1I9KF49	Aeromonas_phage	5.9e-08	36.4
WP_013844832.1\|1870020_1871217_+\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
WP_029727770.1\|1871758_1871959_+	hypothetical protein	NA	NA	NA	NA
WP_128206848.1\|1872478_1872697_+	hypothetical protein	NA	NA	NA	NA
WP_088194176.1\|1872767_1873367_+	hypothetical protein	NA	NA	NA	NA
WP_029727767.1\|1873387_1873753_-	hypothetical protein	A0A076GD39	Sinorhizobium_phage	2.0e-41	71.3
WP_029727766.1\|1874189_1875158_-	chitinase	A0A076G6J8	Sinorhizobium_phage	9.1e-166	88.0
WP_029727764.1\|1875994_1876330_-	hypothetical protein	A0A291AUN7	Sinorhizobium_phage	2.2e-26	70.8
WP_029727763.1\|1876316_1876664_-	hypothetical protein	A0A2H4J9Z7	uncultured_Caudovirales_phage	3.7e-21	49.1
WP_029727762.1\|1876663_1877797_-	hypothetical protein	A0A291AUN5	Sinorhizobium_phage	5.5e-29	37.6
WP_029727761.1\|1877808_1879323_-	hypothetical protein	A0A2D2W219	Sinorhizobium_phage	5.4e-266	87.8
WP_029727760.1\|1879322_1879547_-	hypothetical protein	A0A291AUN2	Sinorhizobium_phage	9.8e-07	40.5
WP_029727759.1\|1879562_1882256_-\|tail	tail protein	G8DH58	Emiliania_huxleyi_virus	5.9e-106	36.4
WP_029727758.1\|1882257_1882695_-	hypothetical protein	NA	NA	NA	NA
WP_029727757.1\|1882694_1883363_-	hypothetical protein	NA	NA	NA	NA
WP_029727756.1\|1883372_1884011_-	hypothetical protein	NA	NA	NA	NA
WP_029727755.1\|1884010_1885969_-\|tail	phage tail length tape measure family protein	A0A2D2W291	Sinorhizobium_phage	1.3e-49	32.4
WP_029727754.1\|1885980_1886238_+	hypothetical protein	NA	NA	NA	NA
WP_158529783.1\|1886239_1886389_-	hypothetical protein	NA	NA	NA	NA
WP_029727753.1\|1886391_1886796_-	gene transfer agent family protein	B4UTQ4	Rhizobium_phage	2.7e-10	31.6
WP_029727752.1\|1886795_1887245_-	hypothetical protein	NA	NA	NA	NA
WP_028004794.1\|1887254_1887665_-	DUF3168 domain-containing protein	A0A141GEW7	Brucella_phage	1.9e-16	38.3
WP_029727751.1\|1887664_1888171_-	hypothetical protein	NA	NA	NA	NA
WP_029727750.1\|1888170_1888521_-\|head,tail	head-tail adaptor protein	NA	NA	NA	NA
WP_164901948.1\|1888507_1888684_-	hypothetical protein	NA	NA	NA	NA
WP_029727749.1\|1888695_1889010_-\|head,tail	phage gp6-like head-tail connector protein	NA	NA	NA	NA
WP_050574230.1\|1889011_1889593_-	hypothetical protein	F8TVA1	EBPR_siphovirus	2.1e-32	50.0
WP_029727747.1\|1889589_1890969_-\|portal	phage portal protein	F8TVA0	EBPR_siphovirus	5.5e-132	58.9
WP_029727746.1\|1890968_1891226_-	hypothetical protein	NA	NA	NA	NA
WP_029727745.1\|1891282_1893241_-\|capsid	phage major capsid protein	S4TNE3	Salmonella_phage	1.1e-112	40.1
WP_029727744.1\|1893251_1894946_-\|terminase	terminase large subunit	Q3HQS7	Burkholderia_phage	1.5e-184	58.0

DBSCAN-SWA_5

2326972 : 2357682

Planktothrix_phage(33.33%)

holin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012477342.1\|2326972_2328502_-\|transposase	IS21 family transposase	K4I413	Acidithiobacillus_phage	1.6e-119	43.9
WP_014529839.1\|2328617_2328872_-	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA
WP_010969927.1\|2328994_2329369_-	DUF423 domain-containing protein	NA	NA	NA	NA
WP_003536349.1\|2329374_2329767_-	globin	NA	NA	NA	NA
WP_010969926.1\|2329894_2330299_-	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA
WP_003536345.1\|2330295_2330568_-	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
WP_010969925.1\|2330704_2331265_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_003536339.1\|2331312_2331654_+	EamA family transporter	NA	NA	NA	NA
WP_014529838.1\|2331833_2332889_+	dipeptidase	NA	NA	NA	NA
WP_003536336.1\|2332936_2334577_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_029728269.1\|2334618_2335662_+	ABC transporter permease	NA	NA	NA	NA
WP_010969922.1\|2335658_2336591_+	ABC transporter permease	NA	NA	NA	NA
WP_010969921.1\|2336587_2337421_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.2e-09	29.9
WP_003536332.1\|2337417_2338185_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.7e-24	33.6
WP_010969920.1\|2338510_2339428_-	sugar kinase	NA	NA	NA	NA
WP_013844761.1\|2339562_2341206_+	alpha-glucosidase	NA	NA	NA	NA
WP_086017820.1\|2341268_2342215_-\|transposase	IS630-like element ISRm2011-2 family transposase	S5VXX4	Leptospira_phage	1.0e-12	24.7
WP_013844760.1\|2342444_2344142_-	adenine deaminase	NA	NA	NA	NA
WP_010969917.1\|2344229_2345558_-	aspartate aminotransferase family protein	NA	NA	NA	NA
WP_010969916.1\|2345647_2346181_-	ATP-binding protein	NA	NA	NA	NA
WP_013844758.1\|2346326_2346671_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_013844757.1\|2346789_2347533_-	HugZ family protein	NA	NA	NA	NA
WP_010969913.1\|2347566_2348616_-\|holin	choline ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.9e-20	33.7
WP_013844756.1\|2348612_2349458_-\|holin	choline ABC transporter permease subunit	NA	NA	NA	NA
WP_010969911.1\|2349614_2350571_-\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_010969910.1\|2350857_2351445_+	thymidine kinase	A0A0K2FHC3	Enterobacter_phage	4.1e-52	54.7
WP_003535848.1\|2351605_2352694_+	hypothetical protein	NA	NA	NA	NA
WP_014529834.1\|2352755_2353904_+	hypothetical protein	NA	NA	NA	NA
WP_010969907.1\|2353907_2355824_+	ATP-binding protein	NA	NA	NA	NA
WP_010969906.1\|2355936_2356341_+	DUF559 domain-containing protein	NA	NA	NA	NA
WP_088194098.1\|2356518_2357682_-\|transposase	IS4-like element ISRm16 family transposase	NA	NA	NA	NA

DBSCAN-SWA_6

2412749 : 2469342

Vibrio_phage(10.0%)

tail,portal,transposase,head,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010969865.1\|2412749_2413091_+\|tRNA	tRNA-binding protein	NA	NA	NA	NA
WP_003532899.1\|2413103_2414486_-	HAMP domain-containing protein	A0A1V0SGX0	Hokovirus	8.8e-05	22.9
WP_013844742.1\|2414520_2415222_-	response regulator transcription factor	W8CYM9	Bacillus_phage	3.4e-37	38.2
WP_003532901.1\|2415525_2416002_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_010969864.1\|2416194_2416461_-	hypothetical protein	NA	NA	NA	NA
WP_013844741.1\|2416786_2417416_-	DUF1236 domain-containing protein	NA	NA	NA	NA
WP_003532904.1\|2417636_2417792_+	hypothetical protein	NA	NA	NA	NA
WP_003532905.1\|2417901_2418543_+	MBL fold metallo-hydrolase	A0A1X9I5D3	Streptococcus_phage	7.2e-18	30.5
WP_003532907.1\|2418613_2419039_-	BA14K family protein	NA	NA	NA	NA
WP_003532915.1\|2419182_2419398_-	cold-shock protein	A0A1W6JNX5	Morganella_phage	9.1e-10	50.0
WP_029727816.1\|2420067_2420970_-	DMT family transporter	NA	NA	NA	NA
WP_010969862.1\|2421158_2422349_-	PQQ-dependent sugar dehydrogenase	NA	NA	NA	NA
WP_003532922.1\|2422474_2422756_-	hypothetical protein	NA	NA	NA	NA
WP_003532924.1\|2422748_2422946_-	hypothetical protein	NA	NA	NA	NA
WP_010969860.1\|2423343_2424546_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
WP_013844739.1\|2424666_2425533_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_014529157.1\|2425557_2426319_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_003532933.1\|2426431_2427322_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_010969856.1\|2427360_2428566_-	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	R4TGJ8	Halovirus	6.7e-41	32.9
WP_003532937.1\|2428891_2429341_+	GatB/YqeY domain-containing protein	A0A292GL36	Xanthomonas_phage	3.0e-15	38.4
WP_010969855.1\|2429574_2431578_+	DNA primase	A0A0K1LMQ9	Caulobacter_phage	3.5e-87	41.5
WP_010969854.1\|2431623_2433534_+	DNA helicase RecQ	A0A1V0SBK0	Catovirus	1.1e-74	35.7
WP_010969853.1\|2433793_2434981_+	glycine C-acetyltransferase	D2TEZ5	Emiliania_huxleyi_virus	9.2e-35	27.8
WP_013844736.1\|2435003_2436038_+	L-threonine 3-dehydrogenase	R9TPW0	Vibrio_phage	4.1e-15	68.6
WP_003532953.1\|2436470_2438525_+	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	1.1e-35	33.6
WP_003532955.1\|2438746_2439037_+	GYD domain-containing protein	NA	NA	NA	NA
WP_003537532.1\|2439404_2439974_+	transglycosylase SLT domain-containing protein	NA	NA	NA	NA
WP_003537534.1\|2440075_2440429_+	DUF1428 domain-containing protein	NA	NA	NA	NA
WP_017271805.1\|2440542_2440770_+	YjbQ family protein	NA	NA	NA	NA
WP_010969728.1\|2440783_2441860_+\|transposase	ISAs1-like element ISRm21 family transposase	NA	NA	NA	NA
WP_003537547.1\|2442249_2442654_+	nuclear transport factor 2 family protein	NA	NA	NA	NA
WP_003537549.1\|2442910_2443267_+	hypothetical protein	NA	NA	NA	NA
WP_003537551.1\|2443354_2444143_-	SIMPL domain-containing protein	NA	NA	NA	NA
WP_014529161.1\|2444475_2444895_-	hypothetical protein	NA	NA	NA	NA
WP_017271689.1\|2445736_2445967_-	hypothetical protein	NA	NA	NA	NA
WP_014529163.1\|2445963_2446230_-	hypothetical protein	NA	NA	NA	NA
WP_014529164.1\|2446248_2447817_-	hypothetical protein	NA	NA	NA	NA
WP_014529165.1\|2447827_2448325_-	hypothetical protein	Q8W6L2	Sinorhizobium_phage	1.8e-29	45.5
WP_014529166.1\|2448324_2449479_-	hypothetical protein	A0A1Y0SVH2	Sinorhizobium_phage	1.6e-31	57.9
WP_014529167.1\|2449493_2452667_-	host specificity protein J	Q3HQU5	Burkholderia_phage	6.7e-133	37.2
WP_014529168.1\|2452663_2453401_-\|tail	tail assembly protein	A0A1B1IV58	uncultured_Mediterranean_phage	4.1e-09	25.9
WP_017271691.1\|2453397_2454150_-	C40 family peptidase	F1C573	Cronobacter_phage	8.1e-29	34.5
WP_014529170.1\|2454155_2454851_-\|tail	phage minor tail protein L	Q6JIL5	Burkholderia_virus	2.4e-43	42.3
WP_014529171.1\|2454847_2455231_-\|tail	phage tail protein	K7P7R1	Enterobacteria_phage	4.4e-07	31.3
WP_014529172.1\|2455230_2457420_-	hypothetical protein	NA	NA	NA	NA
WP_014529173.1\|2457429_2457876_-	phage protein, HK97 gp10 family	NA	NA	NA	NA
WP_020479474.1\|2457875_2458082_-	hypothetical protein	NA	NA	NA	NA
WP_014529174.1\|2458035_2458488_-	hypothetical protein	NA	NA	NA	NA
WP_017271694.1\|2458497_2459157_-	hypothetical protein	NA	NA	NA	NA
WP_014529176.1\|2459451_2461245_+	AAA family ATPase	NA	NA	NA	NA
WP_014529177.1\|2461258_2463082_+	ATP-dependent helicase	NA	NA	NA	NA
WP_017271695.1\|2463105_2463492_-	hypothetical protein	NA	NA	NA	NA
WP_017271696.1\|2463488_2463665_-	hypothetical protein	NA	NA	NA	NA
WP_017271697.1\|2463693_2464080_-	hypothetical protein	NA	NA	NA	NA
WP_017271698.1\|2464076_2464415_-\|head,tail	head-tail adaptor protein	NA	NA	NA	NA
WP_017271699.1\|2464411_2465131_-	glycoside hydrolase family 25 protein	I3VYU7	Thermoanaerobacterium_phage	1.1e-06	27.5
WP_014529181.1\|2465112_2465664_-	hypothetical protein	NA	NA	NA	NA
WP_014529182.1\|2465667_2466786_-	hypothetical protein	NA	NA	NA	NA
WP_014529183.1\|2466782_2467946_-	collagen-like protein	NA	NA	NA	NA
WP_014529184.1\|2467923_2469342_-\|portal	phage portal protein	A0A2H4JFN7	uncultured_Caudovirales_phage	4.5e-12	23.6

DBSCAN-SWA_7

3246785 : 3286778

Sinorhizobium_phage(90.0%)

tail,terminase,portal,head,tRNA,capsid

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010969351.1\|3246785_3247535_-\|tRNA	alanyl-tRNA editing protein	NA	NA	NA	NA
WP_014529584.1\|3247542_3248583_-	cysteine synthase A	A0A1X9I5K7	Streptococcus_phage	3.3e-44	38.1
WP_010969349.1\|3248897_3249746_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_003528289.1\|3249939_3250179_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
WP_010969348.1\|3250175_3250574_+	PIN domain-containing protein	NA	NA	NA	NA
WP_003528293.1\|3250650_3250977_-	multidrug efflux SMR transporter	NA	NA	NA	NA
WP_010969347.1\|3250973_3251318_-	multidrug efflux SMR transporter	NA	NA	NA	NA
WP_014529585.1\|3251522_3251723_-	hypothetical protein	NA	NA	NA	NA
WP_014529586.1\|3251722_3252100_-	HNH endonuclease	A0A291AUJ4	Sinorhizobium_phage	8.4e-43	65.0
WP_014529587.1\|3252096_3252636_-	hypothetical protein	A0A291AUJ2	Sinorhizobium_phage	1.1e-27	45.2
WP_014529588.1\|3252632_3253004_-	DUF4326 domain-containing protein	A0A291AUQ7	Sinorhizobium_phage	6.4e-19	39.7
WP_017265688.1\|3253000_3253183_-	hypothetical protein	A0A291AUC9	Sinorhizobium_phage	1.9e-08	54.5
WP_014529589.1\|3253175_3253499_-	hypothetical protein	A0A291AUJ5	Sinorhizobium_phage	1.3e-15	47.0
WP_014529590.1\|3253495_3253828_-	hypothetical protein	NA	NA	NA	NA
WP_017265689.1\|3253843_3254089_-	hypothetical protein	NA	NA	NA	NA
WP_014529592.1\|3254085_3254259_-	hypothetical protein	NA	NA	NA	NA
WP_017265691.1\|3254378_3254612_-	hypothetical protein	NA	NA	NA	NA
WP_014529594.1\|3254705_3254888_-	hypothetical protein	A0A291AUK1	Sinorhizobium_phage	2.6e-05	41.7
WP_014529595.1\|3255852_3256518_-	helix-turn-helix domain-containing protein	A0A1X9HW95	Ruegeria_phage	9.1e-24	40.3
WP_014529596.1\|3257079_3257535_+	hypothetical protein	NA	NA	NA	NA
WP_014529597.1\|3257534_3257756_+	hypothetical protein	NA	NA	NA	NA
WP_014529598.1\|3258001_3258208_+	hypothetical protein	NA	NA	NA	NA
WP_014529599.1\|3258204_3259728_+	S-adenosylmethionine-binding protein	A0A2I7QIB9	Vibrio_phage	2.6e-13	28.2
WP_014529600.1\|3259724_3260030_+	hypothetical protein	A0A291AUK8	Sinorhizobium_phage	3.3e-21	55.0
WP_020479328.1\|3260035_3260284_-	DUF982 domain-containing protein	NA	NA	NA	NA
WP_014529601.1\|3260394_3261648_+	hypothetical protein	A0A291AUS5	Sinorhizobium_phage	3.2e-155	71.5
WP_014529602.1\|3261631_3262291_+	antitermination factor NusG	NA	NA	NA	NA
WP_014529603.1\|3262519_3263266_+	hypothetical protein	A0A291AUL1	Sinorhizobium_phage	3.0e-116	84.7
WP_014529604.1\|3263414_3264056_+	hypothetical protein	A0A291AUL0	Sinorhizobium_phage	1.6e-54	58.9
WP_049225161.1\|3264052_3266095_+\|terminase	phage terminase large subunit family protein	A0A291AUK9	Sinorhizobium_phage	0.0e+00	89.5
WP_014529606.1\|3266105_3266342_+	hypothetical protein	A0A291AUL5	Sinorhizobium_phage	7.6e-26	79.5
WP_014529607.1\|3266338_3268060_+\|portal	phage portal protein	A0A291AUL8	Sinorhizobium_phage	9.2e-286	83.2
WP_014529608.1\|3268056_3268962_+	S49 family peptidase	A0A291AUM2	Sinorhizobium_phage	3.1e-144	86.1
WP_014529609.1\|3268987_3269530_+	hypothetical protein	A0A291AUL6	Sinorhizobium_phage	1.4e-38	77.5
WP_014529610.1\|3269532_3269889_+\|head	head decoration protein	A0A291AUM0	Sinorhizobium_phage	3.1e-47	84.7
WP_014529611.1\|3269916_3270948_+\|capsid	major capsid protein	A0A291AUL7	Sinorhizobium_phage	1.9e-177	87.1
WP_014529612.1\|3271022_3271427_+	hypothetical protein	A0A291AUM1	Sinorhizobium_phage	6.1e-15	60.6
WP_014529613.1\|3271423_3271750_+	hypothetical protein	A0A291AUL9	Sinorhizobium_phage	3.6e-34	70.8
WP_014529614.1\|3271752_3272046_+	hypothetical protein	A0A291AUM3	Sinorhizobium_phage	1.0e-27	66.0
WP_017265746.1\|3272047_3272512_+	hypothetical protein	A0A291AUM4	Sinorhizobium_phage	2.0e-49	65.6
WP_011975792.1\|3272605_3273016_+\|tail	tail protein	A0A291AUM5	Sinorhizobium_phage	3.7e-52	76.5
WP_014529616.1\|3273028_3273430_+	hypothetical protein	A0A291AUM7	Sinorhizobium_phage	9.9e-50	77.7
WP_014529419.1\|3273477_3273669_+	hypothetical protein	A0A291AUN4	Sinorhizobium_phage	1.5e-19	74.2
WP_014529617.1\|3273669_3273849_-	hypothetical protein	NA	NA	NA	NA
WP_014529618.1\|3273951_3275823_+	hypothetical protein	A0A291AUM6	Sinorhizobium_phage	6.9e-186	59.4
WP_014529619.1\|3275822_3276473_+	hypothetical protein	A0A291AUM9	Sinorhizobium_phage	5.7e-79	69.1
WP_014529620.1\|3276469_3277060_+	DUF2163 domain-containing protein	A0A291AUM8	Sinorhizobium_phage	5.3e-76	72.1
WP_013843999.1\|3277205_3277478_-	hypothetical protein	NA	NA	NA	NA
WP_014529621.1\|3277549_3277954_+	hypothetical protein	A0A291AUN0	Sinorhizobium_phage	1.6e-47	70.9
WP_014529622.1\|3277960_3280618_+\|tail	phage tail protein	A0A291AUN1	Sinorhizobium_phage	9.9e-263	64.2
WP_026029902.1\|3280617_3282132_+	hypothetical protein	A0A2D2W219	Sinorhizobium_phage	6.0e-265	87.6
WP_014529624.1\|3282143_3283277_+	hypothetical protein	A0A2L2R219	Sinorhizobium_phage	6.1e-36	42.9
WP_014529625.1\|3283276_3283624_+	hypothetical protein	A0A2H4J9Z7	uncultured_Caudovirales_phage	1.3e-21	47.4
WP_014529626.1\|3283610_3283946_+	hypothetical protein	A0A291AUN7	Sinorhizobium_phage	9.8e-27	71.9
WP_014529627.1\|3284221_3284491_-	hypothetical protein	NA	NA	NA	NA
WP_014529628.1\|3284639_3285608_+	chitinase	A0A076G6J8	Sinorhizobium_phage	1.7e-164	86.4
WP_014529629.1\|3285607_3285925_+	ammonia monooxygenase	A0A291AUV3	Sinorhizobium_phage	3.4e-37	63.9
WP_014529630.1\|3285924_3286209_+	hypothetical protein	A0A076G8H8	Sinorhizobium_phage	9.2e-26	61.7
WP_014529631.1\|3286412_3286778_+	hypothetical protein	A0A076GD39	Sinorhizobium_phage	3.7e-43	73.3

DBSCAN-SWA_8

3390722 : 3426498

Mesorhizobium_phage(72.0%)

terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_029727610.1\|3390722_3391568_-	hypothetical protein	A0A076YL19	Mesorhizobium_phage	4.6e-73	55.2
WP_158529780.1\|3393383_3393545_+	hypothetical protein	NA	NA	NA	NA
WP_029727611.1\|3393549_3393873_+	hypothetical protein	NA	NA	NA	NA
WP_029727612.1\|3393883_3394108_+	hypothetical protein	NA	NA	NA	NA
WP_049225141.1\|3394305_3396015_-\|terminase	phage terminase large subunit	A0A076YJ70	Mesorhizobium_phage	1.7e-252	76.4
WP_029727614.1\|3396134_3396410_-	hypothetical protein	A0A076YM84	Mesorhizobium_phage	2.6e-17	53.9
WP_029727615.1\|3396399_3396633_-	hypothetical protein	A0A076YNX1	Mesorhizobium_phage	4.0e-11	60.0
WP_029727616.1\|3396637_3397111_-	hypothetical protein	NA	NA	NA	NA
WP_033052464.1\|3397110_3398748_-	hypothetical protein	A0A076YL75	Mesorhizobium_phage	1.1e-49	49.0
WP_050574227.1\|3398793_3402603_-	hypothetical protein	A0A076YQK7	Mesorhizobium_phage	9.4e-307	47.2
WP_148707593.1\|3402656_3404765_-	hypothetical protein	A0A076YM79	Mesorhizobium_phage	3.2e-83	34.0
WP_148707594.1\|3405008_3405509_-	hypothetical protein	A0A076YNW7	Mesorhizobium_phage	7.0e-37	75.0
WP_049225140.1\|3405541_3405994_-	DUF2833 domain-containing protein	A0A076YJ63	Mesorhizobium_phage	3.4e-46	54.8
WP_127650224.1\|3406018_3408490_-	hypothetical protein	A0A076YL68	Mesorhizobium_phage	1.6e-278	57.0
WP_049225139.1\|3408492_3409074_-	hypothetical protein	A0A076YQK3	Mesorhizobium_phage	3.6e-53	57.3
WP_049225145.1\|3409148_3409949_-	hypothetical protein	A0A076YM75	Mesorhizobium_phage	3.0e-114	77.8
WP_029727624.1\|3410583_3410913_-	hypothetical protein	A0A076YQK0	Mesorhizobium_phage	7.4e-19	50.0
WP_029727626.1\|3411124_3411511_-	M15 family metallopeptidase	A9DET4	Yersinia_phage	6.2e-49	69.0
WP_029727627.1\|3411523_3412333_-	hypothetical protein	L7TQY4	Rhizobium_phage	7.6e-33	38.5
WP_029727628.1\|3412441_3414013_-	hypothetical protein	A0A076YM66	Mesorhizobium_phage	3.9e-182	62.0
WP_029727630.1\|3414502_3414715_+	hypothetical protein	NA	NA	NA	NA
WP_029727632.1\|3414937_3415669_-	hypothetical protein	A0A076YQJ3	Mesorhizobium_phage	1.4e-97	71.2
WP_158529781.1\|3415678_3415825_-	hypothetical protein	NA	NA	NA	NA
WP_080654658.1\|3415821_3416148_-	GIY-YIG nuclease family protein	A0A2R8FFZ6	Yersinia_phage	7.9e-13	46.1
WP_080654662.1\|3416179_3418141_-	hypothetical protein	A0A076YNV1	Mesorhizobium_phage	1.2e-257	68.3
WP_153414258.1\|3418257_3418410_-	hypothetical protein	L7TKB4	Rhizobium_phage	2.2e-10	73.3
WP_080654659.1\|3418409_3420314_-	toprim domain-containing protein	A0A2D2W4Z3	Ralstonia_phage	1.3e-171	56.2
WP_029727637.1\|3420584_3421091_-	hypothetical protein	J7SCC9	Pseudomonas_phage	5.3e-08	27.8
WP_029727638.1\|3421090_3421354_-	hypothetical protein	NA	NA	NA	NA
WP_029727639.1\|3421436_3421658_-	hypothetical protein	NA	NA	NA	NA
WP_029727640.1\|3421654_3422122_-	hypothetical protein	A0A2R2ZGE6	Ralstonia_phage	8.3e-40	58.1
WP_029727641.1\|3422125_3422812_-	hypothetical protein	NA	NA	NA	NA
WP_029727642.1\|3422964_3423384_-	hypothetical protein	NA	NA	NA	NA
WP_029727643.1\|3423376_3423649_-	hypothetical protein	A0A076YM53	Mesorhizobium_phage	6.3e-24	64.4
WP_029727644.1\|3423712_3423925_-	hypothetical protein	NA	NA	NA	NA
WP_029727645.1\|3424020_3426498_-	hypothetical protein	A0A076YJ28	Mesorhizobium_phage	1.1e-279	58.5

DBSCAN-SWA_9

3438229 : 3449478

uncultured_Mediterranean_phage(80.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010969286.1\|3438229_3439768_-	LysM peptidoglycan-binding domain-containing protein	I3PV24	Clostridium_phage	1.0e-14	32.8
WP_010969285.1\|3440091_3440745_-	biotin transport regulator	NA	NA	NA	NA
WP_014526709.1\|3440916_3441570_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	2.6e-15	34.6
WP_010969283.1\|3441566_3442337_-	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	1.5e-22	30.9
WP_003534571.1\|3442364_3443648_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	8.0e-101	47.0
WP_003534569.1\|3443784_3444627_-	twin-arginine translocase subunit TatC	A0A1B1IVR7	uncultured_Mediterranean_phage	1.7e-43	41.2
WP_010969282.1\|3444623_3445271_-	twin-arginine translocase subunit TatB	NA	NA	NA	NA
WP_003534564.1\|3445344_3445551_-	twin-arginine translocase TatA/TatE family subunit	A0A1B1IVR9	uncultured_Mediterranean_phage	8.2e-08	65.9
WP_010969280.1\|3445645_3446755_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.4e-29	37.6
WP_064744417.1\|3446819_3447572_-	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	1.0e-39	45.2
WP_014526708.1\|3447531_3448371_-	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	1.8e-32	34.7
WP_010969277.1\|3448443_3449478_-	beta-N-acetylhexosaminidase	A0A1B1IVS3	uncultured_Mediterranean_phage	2.0e-22	42.6

DBSCAN-SWA_10

3452499 : 3520335

uncultured_Mediterranean_phage(28.57%)

protease,transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010969275.1\|3452499_3454257_-\|tRNA	arginine--tRNA ligase	NA	NA	NA	NA
WP_003534550.1\|3454354_3455572_-	deoxyguanosinetriphosphate triphosphohydrolase	NA	NA	NA	NA
WP_003534548.1\|3455788_3456118_+	iron-sulfur cluster insertion protein ErpA	A0A2H4N7M3	Lake_Baikal_phage	1.6e-21	48.6
WP_010969274.1\|3456143_3457607_-	PLDc N-terminal domain-containing protein	NA	NA	NA	NA
WP_003534544.1\|3457814_3458606_+	exodeoxyribonuclease III	NA	NA	NA	NA
WP_003534542.1\|3458664_3459471_-	sel1 repeat family protein	NA	NA	NA	NA
WP_012477246.1\|3460613_3461828_-\|transposase	IS701-like element ISRm31 family transposase	NA	NA	NA	NA
WP_010969272.1\|3463019_3465863_-\|tRNA	valine--tRNA ligase	A0A1V0SK04	Klosneuvirus	1.9e-134	36.9
WP_029727649.1\|3466176_3466932_-	DUF2497 domain-containing protein	NA	NA	NA	NA
WP_010969270.1\|3467156_3468527_-	TolC family outer membrane protein	NA	NA	NA	NA
WP_010969269.1\|3468803_3469463_-	protein-L-isoaspartate O-methyltransferase	NA	NA	NA	NA
WP_010969268.1\|3470438_3470864_-	TonB system transport protein ExbD	NA	NA	NA	NA
WP_010969267.1\|3470870_3471857_-	tonB-system energizer ExbB	NA	NA	NA	NA
WP_010969266.1\|3472077_3474483_-	ComEC/Rec2 family competence protein	NA	NA	NA	NA
WP_010969265.1\|3474788_3476078_+	citrate (Si)-synthase	NA	NA	NA	NA
WP_010969264.1\|3476615_3476900_+	GIY-YIG nuclease family protein	NA	NA	NA	NA
WP_010969263.1\|3477099_3478269_-	lipid-A-disaccharide synthase	NA	NA	NA	NA
WP_010969262.1\|3478265_3479153_-	LpxI family protein	NA	NA	NA	NA
WP_162145860.1\|3479152_3479971_-	acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA	NA	NA	NA
WP_010969260.1\|3479967_3480432_-	3-hydroxyacyl-ACP dehydratase FabZ	NA	NA	NA	NA
WP_010969259.1\|3480424_3481489_-	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA
WP_010969258.1\|3481533_3483864_-	outer membrane protein assembly factor BamA	NA	NA	NA	NA
WP_003534980.1\|3484112_3485237_-\|protease	RIP metalloprotease RseP	NA	NA	NA	NA
WP_014529665.1\|3485367_3486201_-	phosphatidate cytidylyltransferase	NA	NA	NA	NA
WP_003534985.1\|3486200_3486944_-	isoprenyl transferase	R9W0U9	Flavobacterium_phage	2.7e-16	35.9
WP_003534987.1\|3486980_3487541_-	ribosome recycling factor	NA	NA	NA	NA
WP_003534989.1\|3487592_3488315_-	UMP kinase	NA	NA	NA	NA
WP_003534991.1\|3488498_3489422_-	elongation factor Ts	NA	NA	NA	NA
WP_003534993.1\|3489674_3490442_-	30S ribosomal protein S2	NA	NA	NA	NA
WP_003534995.1\|3490627_3491446_-	cell envelope integrity EipB family protein	NA	NA	NA	NA
WP_010969255.1\|3491587_3492052_+	RidA family protein	NA	NA	NA	NA
WP_010969254.1\|3492065_3492791_+	glycerophosphoryl diester phosphodiesterase	NA	NA	NA	NA
WP_010969253.1\|3492795_3493983_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_003535003.1\|3494018_3494438_+	HIT family protein	NA	NA	NA	NA
WP_003535005.1\|3494691_3495063_-	AzlD domain-containing protein	NA	NA	NA	NA
WP_003535007.1\|3495032_3495779_-	AzlC family ABC transporter permease	NA	NA	NA	NA
WP_010969251.1\|3495851_3498368_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	2.8e-174	42.6
WP_003535011.1\|3498377_3498731_-\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	1.5e-12	43.9
WP_010969250.1\|3499002_3499356_-	phasin family protein	NA	NA	NA	NA
WP_003535016.1\|3499597_3499801_-	DUF3126 family protein	NA	NA	NA	NA
WP_003535018.1\|3499980_3500808_-	serine O-acetyltransferase	NA	NA	NA	NA
WP_003535020.1\|3501105_3501885_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_003535025.1\|3502074_3502320_+	zinc-finger domain-containing protein	NA	NA	NA	NA
WP_010969248.1\|3502347_3503511_+	FAD-dependent monooxygenase	NA	NA	NA	NA
WP_010969247.1\|3503565_3504753_-	cystathionine beta-lyase	NA	NA	NA	NA
WP_003535031.1\|3505090_3506116_+	amino acid ABC transporter substrate-binding protein	A0A1B1IT51	uncultured_Mediterranean_phage	1.2e-78	43.4
WP_014529669.1\|3506220_3507414_+	amino acid ABC transporter permease	NA	NA	NA	NA
WP_010969245.1\|3507418_3508573_+	amino acid ABC transporter permease	NA	NA	NA	NA
WP_003535037.1\|3508591_3509368_+	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.1e-32	40.5
WP_010969244.1\|3509469_3509748_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_003537933.1\|3510015_3511179_+\|transposase	IS4-like element ISRm16 family transposase	NA	NA	NA	NA
WP_003537440.1\|3511296_3512109_-	ferredoxin--NADP reductase	NA	NA	NA	NA
WP_010969243.1\|3512254_3512755_-	DUF934 domain-containing protein	NA	NA	NA	NA
WP_014529670.1\|3512772_3514446_-	nitrite/sulfite reductase	NA	NA	NA	NA
WP_003537445.1\|3514461_3514779_-	DUF2849 domain-containing protein	NA	NA	NA	NA
WP_010969241.1\|3514789_3516247_-	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA
WP_010969240.1\|3516470_3517058_+	nucleoside deaminase	NA	NA	NA	NA
WP_003537451.1\|3517061_3517895_+	nucleoside triphosphate pyrophosphohydrolase	NA	NA	NA	NA
WP_010968459.1\|3519162_3520335_+\|transposase	IS481-like element ISRm20 family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage