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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP020926 Sphingobium yanoikuyae strain SHJ plasmid pSES220, complete sequence 0 crisprs NA 0 0 13 0
NZ_CP020925 Sphingobium yanoikuyae strain SHJ chromosome, complete genome 2 crisprs DEDDh,cas3,csa3,PD-DExK,c2c9_V-U4,RT 5 0 368 0
NZ_CP020927 Sphingobium yanoikuyae strain SHJ plasmid pSES189, complete sequence 0 crisprs csa3 0 0 2 0

Results visualization

1. NZ_CP020926
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 12889 17 uncultured_virus(33.33%) NA NA
DBSCAN-SWA_2 20374 : 23497 1 Hokovirus(100.0%) NA NA
DBSCAN-SWA_3 26523 : 83164 56 Corynebacterium_phage(16.67%) protease,transposase,integrase attL 73967:73989|attR 81246:81268
DBSCAN-SWA_4 90406 : 94874 5 Streptococcus_phage(50.0%) NA NA
DBSCAN-SWA_5 100757 : 130030 27 Mycobacterium_phage(12.5%) integrase,transposase attL 119138:119152|attR 130891:130905
DBSCAN-SWA_6 134973 : 141733 6 Erythrobacter_phage(33.33%) NA NA
DBSCAN-SWA_7 146220 : 164289 17 Aurantimonas_phage(12.5%) transposase NA
DBSCAN-SWA_8 174726 : 176859 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_9 181175 : 188527 5 Chrysochromulina_ericina_virus(25.0%) NA NA
DBSCAN-SWA_10 194716 : 195418 1 Roseobacter_phage(100.0%) NA NA
DBSCAN-SWA_11 199070 : 200282 1 Corynebacterium_phage(100.0%) transposase NA
DBSCAN-SWA_12 204319 : 204535 1 Lactococcus_phage(100.0%) NA NA
DBSCAN-SWA_13 216433 : 217300 1 Escherichia_phage(100.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP020925
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP020925_1 3472900-3472987 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP020925_2 3473089-3473406 Orphan NA
5 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP020925_1 1.1|3472924|39|NZ_CP020925|CRISPRCasFinder 3472924-3472962 39 NZ_CP020925.1 4692644-4692682 0 1.0
NZ_CP020925_2 2.1|3473113|18|NZ_CP020925|CRISPRCasFinder 3473113-3473130 18 NZ_CP020925.1 4692833-4692850 0 1.0
NZ_CP020925_2 2.2|3473155|39|NZ_CP020925|CRISPRCasFinder 3473155-3473193 39 NZ_CP020925.1 4692875-4692913 0 1.0
NZ_CP020925_2 2.3|3473218|39|NZ_CP020925|CRISPRCasFinder 3473218-3473256 39 NZ_CP020925.1 4692938-4692976 0 1.0
NZ_CP020925_2 2.4|3473281|39|NZ_CP020925|CRISPRCasFinder 3473281-3473319 39 NZ_CP020925.1 4205454-4205492 0 1.0
NZ_CP020925_2 2.4|3473281|39|NZ_CP020925|CRISPRCasFinder 3473281-3473319 39 NZ_CP020925.1 4693001-4693039 1 0.974
NZ_CP020925_2 2.3|3473218|39|NZ_CP020925|CRISPRCasFinder 3473218-3473256 39 NZ_CP020925.1 4205391-4205429 2 0.949

1. spacer 1.1|3472924|39|NZ_CP020925|CRISPRCasFinder matches to position: 4692644-4692682, mismatch: 0, identity: 1.0

ggcgaccagcgctggcgcggcgggaacatcggcaaccgc	CRISPR spacer
ggcgaccagcgctggcgcggcgggaacatcggcaaccgc	Protospacer
***************************************

2. spacer 2.1|3473113|18|NZ_CP020925|CRISPRCasFinder matches to position: 4692833-4692850, mismatch: 0, identity: 1.0

cgggaacagtgccagcgc	CRISPR spacer
cgggaacagtgccagcgc	Protospacer
******************

3. spacer 2.2|3473155|39|NZ_CP020925|CRISPRCasFinder matches to position: 4692875-4692913, mismatch: 0, identity: 1.0

cagcacgaaggcgaccgaagcaagccagtcagcctcggc	CRISPR spacer
cagcacgaaggcgaccgaagcaagccagtcagcctcggc	Protospacer
***************************************

4. spacer 2.3|3473218|39|NZ_CP020925|CRISPRCasFinder matches to position: 4692938-4692976, mismatch: 0, identity: 1.0

cagcacgaaggccggcgaggcatcgaccagtgcgtcaca	CRISPR spacer
cagcacgaaggccggcgaggcatcgaccagtgcgtcaca	Protospacer
***************************************

5. spacer 2.4|3473281|39|NZ_CP020925|CRISPRCasFinder matches to position: 4205454-4205492, mismatch: 0, identity: 1.0

gcagggccacgccgcgaccgcatcgacgcaggccagcaa	CRISPR spacer
gcagggccacgccgcgaccgcatcgacgcaggccagcaa	Protospacer
***************************************

6. spacer 2.4|3473281|39|NZ_CP020925|CRISPRCasFinder matches to position: 4693001-4693039, mismatch: 1, identity: 0.974

gcagggccacgccgcgaccgcatcgacgcaggccagcaa	CRISPR spacer
gcagggccacgccgcgaccgcatcgacgcaggccaccaa	Protospacer
*********************************** ***

7. spacer 2.3|3473218|39|NZ_CP020925|CRISPRCasFinder matches to position: 4205391-4205429, mismatch: 2, identity: 0.949

cagcacgaaggccggcgaggcatcgaccagtgcgtcaca	CRISPR spacer
cagcacgaaggccggcgaggcatcgaccagcgcgtctca	Protospacer
******************************.***** **

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 4770 5 Paramecium_bursaria_Chlorella_virus(100.0%) NA NA
DBSCAN-SWA_2 10448 : 15177 3 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_3 50580 : 54160 3 Acinetobacter_phage(50.0%) NA NA
DBSCAN-SWA_4 66269 : 67550 1 Geobacillus_phage(100.0%) NA NA
DBSCAN-SWA_5 82886 : 83555 1 Aeromonas_virus(100.0%) NA NA
DBSCAN-SWA_6 88975 : 89983 1 Niemeyer_virus(100.0%) NA NA
DBSCAN-SWA_7 94497 : 96285 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_8 104119 : 107530 2 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_9 111514 : 111886 1 uncultured_Mediterranean_phage(100.0%) protease NA
DBSCAN-SWA_10 122607 : 123285 1 Erwinia_phage(100.0%) NA NA
DBSCAN-SWA_11 130609 : 134556 6 Sodalis_phage(50.0%) NA NA
DBSCAN-SWA_12 140294 : 143638 3 Caulobacter_phage(100.0%) NA NA
DBSCAN-SWA_13 151858 : 156650 4 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_14 175302 : 179103 2 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_15 184796 : 186038 1 Orpheovirus(100.0%) NA NA
DBSCAN-SWA_16 193845 : 196835 2 Bodo_saltans_virus(50.0%) NA NA
DBSCAN-SWA_17 202855 : 203686 1 Mycobacterium_phage(100.0%) NA NA
DBSCAN-SWA_18 208989 : 212274 3 Xanthomonas_phage(50.0%) NA NA
DBSCAN-SWA_19 236084 : 236870 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_20 243043 : 243619 1 Cafeteria_roenbergensis_virus(100.0%) NA NA
DBSCAN-SWA_21 246821 : 247403 1 Orpheovirus(100.0%) NA NA
DBSCAN-SWA_22 252852 : 254625 1 Diadromus_pulchellus_ascovirus(100.0%) NA NA
DBSCAN-SWA_23 259203 : 263008 4 Pandoravirus(50.0%) NA NA
DBSCAN-SWA_24 269484 : 274742 4 Pithovirus(50.0%) NA NA
DBSCAN-SWA_25 290377 : 292159 1 Acinetobacter_phage(100.0%) NA NA
DBSCAN-SWA_26 297490 : 299863 1 Acinetobacter_phage(100.0%) NA NA
DBSCAN-SWA_27 305451 : 305658 1 Lactococcus_phage(100.0%) NA NA
DBSCAN-SWA_28 323247 : 328498 4 Streptomyces_phage(33.33%) NA NA
DBSCAN-SWA_29 333802 : 338554 7 uncultured_virus(50.0%) NA NA
DBSCAN-SWA_30 351067 : 351835 1 Lactococcus_phage(100.0%) NA NA
DBSCAN-SWA_31 354949 : 357298 3 Pneumococcus_phage(50.0%) NA NA
DBSCAN-SWA_32 366515 : 375935 16 Rhodobacter_phage(25.0%) NA NA
DBSCAN-SWA_33 382776 : 383670 1 Diadromus_pulchellus_ascovirus(100.0%) NA NA
DBSCAN-SWA_34 386674 : 387886 1 Corynebacterium_phage(100.0%) transposase NA
DBSCAN-SWA_35 392759 : 393527 1 Lactococcus_phage(100.0%) NA NA
DBSCAN-SWA_36 397251 : 398463 1 Corynebacterium_phage(100.0%) transposase NA
DBSCAN-SWA_37 408487 : 409138 1 Rhizobium_phage(100.0%) NA NA
DBSCAN-SWA_38 418082 : 422296 2 Tupanvirus(50.0%) NA NA
DBSCAN-SWA_39 429695 : 433525 4 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_40 452078 : 454592 1 Sinorhizobium_phage(100.0%) NA NA
DBSCAN-SWA_41 469944 : 470979 1 Enterobacteria_phage(100.0%) NA NA
DBSCAN-SWA_42 486466 : 487978 1 Synechococcus_phage(100.0%) NA NA
DBSCAN-SWA_43 493290 : 495135 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_44 536231 : 537728 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_45 578381 : 589100 8 Cotesia_sesamiae_Mombasa_bracovirus(25.0%) NA NA
DBSCAN-SWA_46 592411 : 594355 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_47 601484 : 604197 3 environmental_halophage(50.0%) NA NA
DBSCAN-SWA_48 627752 : 629288 1 Streptomyces_phage(100.0%) NA NA
DBSCAN-SWA_49 650638 : 651403 1 Chrysochromulina_ericina_virus(100.0%) NA NA
DBSCAN-SWA_50 657051 : 657807 1 Trichoplusia_ni_ascovirus(100.0%) NA NA
DBSCAN-SWA_51 672764 : 679163 3 Cronobacter_phage(50.0%) NA NA
DBSCAN-SWA_52 682530 : 689110 5 Acinetobacter_phage(33.33%) NA NA
DBSCAN-SWA_53 702707 : 703221 2 Burkholderia_phage(100.0%) NA NA
DBSCAN-SWA_54 712453 : 715432 2 uncultured_virus(50.0%) NA NA
DBSCAN-SWA_55 720294 : 778354 53 Enterobacteria_phage(12.5%) integrase,transposase attL 718663:718679|attR 775681:775697
DBSCAN-SWA_56 787270 : 788122 1 Ostreococcus_tauri_virus(100.0%) NA NA
DBSCAN-SWA_57 791792 : 799180 8 Escherichia_phage(50.0%) NA NA
DBSCAN-SWA_58 808278 : 813217 4 Cafeteria_roenbergensis_virus(50.0%) transposase NA
DBSCAN-SWA_59 816478 : 822489 10 uncultured_virus(50.0%) NA NA
DBSCAN-SWA_60 827207 : 827483 1 Salmonella_phage(100.0%) NA NA
DBSCAN-SWA_61 830584 : 831619 1 Enterobacteria_phage(100.0%) NA NA
DBSCAN-SWA_62 837570 : 840213 1 Cafeteria_roenbergensis_virus(100.0%) NA NA
DBSCAN-SWA_63 843505 : 848982 4 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_64 863127 : 866742 6 Bradyrhizobium_phage(50.0%) NA NA
DBSCAN-SWA_65 878864 : 881378 1 Staphylococcus_phage(100.0%) tRNA NA
DBSCAN-SWA_66 888386 : 889106 1 Pseudomonas_phage(100.0%) NA NA
DBSCAN-SWA_67 896267 : 897976 2 Natrialba_phage(50.0%) NA NA
DBSCAN-SWA_68 902296 : 903175 1 Pithovirus(100.0%) NA NA
DBSCAN-SWA_69 906982 : 909270 2 Catovirus(50.0%) NA NA
DBSCAN-SWA_70 916516 : 919024 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_71 922154 : 924304 2 Streptomyces_phage(50.0%) NA NA
DBSCAN-SWA_72 950782 : 952411 1 Hepacivirus(100.0%) NA NA
DBSCAN-SWA_73 966978 : 967707 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_74 1004211 : 1006134 1 Hokovirus(100.0%) NA NA
DBSCAN-SWA_75 1018833 : 1020510 1 Hepacivirus(100.0%) NA NA
DBSCAN-SWA_76 1042997 : 1047279 3 Pandoravirus(50.0%) NA NA
DBSCAN-SWA_77 1055646 : 1057389 2 Enterobacteria_phage(50.0%) integrase attL 1045822:1045838|attR 1066235:1066251
DBSCAN-SWA_78 1088556 : 1093936 5 uncultured_Caudovirales_phage(75.0%) NA NA
DBSCAN-SWA_79 1098709 : 1099939 1 Synechococcus_phage(100.0%) NA NA
DBSCAN-SWA_80 1112730 : 1115266 5 Acanthocystis_turfacea_Chlorella_virus(50.0%) NA NA
DBSCAN-SWA_81 1119905 : 1123195 3 Salmonella_phage(50.0%) NA NA
DBSCAN-SWA_82 1127621 : 1128332 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_83 1131461 : 1132571 1 Pacmanvirus(100.0%) NA NA
DBSCAN-SWA_84 1139413 : 1140991 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_85 1145746 : 1146853 1 Orpheovirus(100.0%) tRNA NA
DBSCAN-SWA_86 1151147 : 1151684 1 Red_sea_bream_iridovirus(100.0%) NA NA
DBSCAN-SWA_87 1155286 : 1158106 2 Hokovirus(50.0%) NA NA
DBSCAN-SWA_88 1163419 : 1164454 1 Moraxella_phage(100.0%) tRNA NA
DBSCAN-SWA_89 1170276 : 1171242 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_90 1177348 : 1178941 1 Prochlorococcus_phage(100.0%) NA NA
DBSCAN-SWA_91 1189108 : 1191934 3 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_92 1196987 : 1200374 4 Staphylococcus_phage(75.0%) NA NA
DBSCAN-SWA_93 1229269 : 1230460 1 Synechococcus_phage(100.0%) NA NA
DBSCAN-SWA_94 1242028 : 1247446 4 Caulobacter_phage(50.0%) NA NA
DBSCAN-SWA_95 1259093 : 1266210 6 uncultured_Caudovirales_phage(60.0%) NA NA
DBSCAN-SWA_96 1296231 : 1297373 1 Shigella_phage(100.0%) transposase NA
DBSCAN-SWA_97 1302462 : 1307426 6 Stenotrophomonas_phage(50.0%) integrase attL 1297626:1297639|attR 1305628:1305641
DBSCAN-SWA_98 1310639 : 1312682 1 Cafeteria_roenbergensis_virus(100.0%) NA NA
DBSCAN-SWA_99 1328965 : 1336186 8 uncultured_Mediterranean_phage(50.0%) NA NA
DBSCAN-SWA_100 1347436 : 1348627 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_101 1352445 : 1355846 2 Streptococcus_phage(50.0%) NA NA
DBSCAN-SWA_102 1367726 : 1370851 3 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_103 1379408 : 1398441 17 Bacillus_phage(37.5%) holin,tRNA NA
DBSCAN-SWA_104 1402177 : 1405750 1 Streptomyces_phage(100.0%) NA NA
DBSCAN-SWA_105 1418850 : 1420617 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_106 1437565 : 1438018 1 uncultured_Mediterranean_phage(100.0%) NA NA
DBSCAN-SWA_107 1441487 : 1442894 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_108 1454471 : 1454678 1 Pelagibacter_phage(100.0%) NA NA
DBSCAN-SWA_109 1459085 : 1462653 3 Prochlorococcus_phage(50.0%) NA NA
DBSCAN-SWA_110 1480702 : 1481089 1 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_111 1487518 : 1488421 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_112 1496922 : 1497588 1 Lactococcus_phage(100.0%) NA NA
DBSCAN-SWA_113 1502433 : 1508116 5 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_114 1512505 : 1514923 1 Herpes_simplex_virus(100.0%) NA NA
DBSCAN-SWA_115 1525241 : 1531816 4 Prochlorococcus_phage(50.0%) NA NA
DBSCAN-SWA_116 1549384 : 1550710 1 Acinetobacter_phage(100.0%) NA NA
DBSCAN-SWA_117 1575161 : 1575848 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_118 1580242 : 1582141 1 Acanthocystis_turfacea_Chlorella_virus(100.0%) NA NA
DBSCAN-SWA_119 1586208 : 1588245 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_120 1601398 : 1602574 1 Streptococcus_phage(100.0%) integrase attL 1596371:1596385|attR 1610846:1610860
DBSCAN-SWA_121 1615367 : 1623861 2 Vibrio_phage(50.0%) NA NA
DBSCAN-SWA_122 1626988 : 1633518 5 Streptococcus_phage(25.0%) protease NA
DBSCAN-SWA_123 1642823 : 1643507 1 Synechococcus_phage(100.0%) NA NA
DBSCAN-SWA_124 1693693 : 1697437 2 Tupanvirus(50.0%) NA NA
DBSCAN-SWA_125 1701561 : 1704294 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_126 1723933 : 1725397 1 Pandoravirus(100.0%) NA NA
DBSCAN-SWA_127 1744396 : 1750526 2 Geobacillus_virus(50.0%) NA NA
DBSCAN-SWA_128 1761107 : 1762439 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_129 1768617 : 1770867 1 Feldmannia_species_virus(100.0%) NA NA
DBSCAN-SWA_130 1773953 : 1774847 1 Enterococcus_phage(100.0%) NA NA
DBSCAN-SWA_131 1784964 : 1786923 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_132 1802611 : 1807013 2 Acinetobacter_phage(50.0%) NA NA
DBSCAN-SWA_133 1817503 : 1821282 2 Hokovirus(50.0%) NA NA
DBSCAN-SWA_134 1832716 : 1834051 1 Burkholderia_virus(100.0%) NA NA
DBSCAN-SWA_135 1841996 : 1843175 1 Oenococcus_phage(100.0%) NA NA
DBSCAN-SWA_136 1849446 : 1852518 1 Leptospira_phage(100.0%) NA NA
DBSCAN-SWA_137 1864425 : 1865193 1 Lactococcus_phage(100.0%) NA NA
DBSCAN-SWA_138 1871492 : 1872689 1 Ralstonia_phage(100.0%) integrase attL 1864137:1864152|attR 1878421:1878436
DBSCAN-SWA_139 1877050 : 1877749 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_140 1886907 : 1887600 1 Pandoravirus(100.0%) NA NA
DBSCAN-SWA_141 1892440 : 1898092 6 Catovirus(33.33%) transposase NA
DBSCAN-SWA_142 1913546 : 1914488 1 Pectobacterium_phage(100.0%) NA NA
DBSCAN-SWA_143 1922793 : 1969330 58 Enterobacteria_phage(14.29%) terminase,head,integrase,capsid,portal,protease,transposase attL 1945796:1945812|attR 1962526:1962542
DBSCAN-SWA_144 1973698 : 1981111 1 Paracoccus_phage(100.0%) NA NA
DBSCAN-SWA_145 2001764 : 2002475 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_146 2010652 : 2018153 8 Leptospira_phage(33.33%) NA NA
DBSCAN-SWA_147 2028430 : 2029342 1 Streptomyces_phage(100.0%) NA NA
DBSCAN-SWA_148 2035861 : 2044046 6 Synechococcus_phage(50.0%) NA NA
DBSCAN-SWA_149 2062390 : 2071115 8 Erysipelothrix_phage(25.0%) NA NA
DBSCAN-SWA_150 2074326 : 2075061 1 Indivirus(100.0%) NA NA
DBSCAN-SWA_151 2079680 : 2080421 1 Flavobacterium_phage(100.0%) NA NA
DBSCAN-SWA_152 2091802 : 2092732 1 Mycobacterium_phage(100.0%) NA NA
DBSCAN-SWA_153 2095885 : 2096293 1 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_154 2101669 : 2107596 7 uncultured_Mediterranean_phage(66.67%) NA NA
DBSCAN-SWA_155 2115533 : 2117135 1 Pike_perch_iridovirus(100.0%) NA NA
DBSCAN-SWA_156 2137363 : 2138995 1 Only_Syngen_Nebraska_virus(100.0%) NA NA
DBSCAN-SWA_157 2151065 : 2156742 7 Bodo_saltans_virus(50.0%) NA NA
DBSCAN-SWA_158 2166372 : 2179670 13 uncultured_virus(33.33%) transposase NA
DBSCAN-SWA_159 2183204 : 2184335 1 uncultured_Mediterranean_phage(100.0%) tRNA NA
DBSCAN-SWA_160 2187643 : 2188330 1 Rhizobium_phage(100.0%) NA NA
DBSCAN-SWA_161 2196943 : 2198473 1 Acinetobacter_phage(100.0%) NA NA
DBSCAN-SWA_162 2201758 : 2205404 5 Tupanvirus(50.0%) NA NA
DBSCAN-SWA_163 2219996 : 2231116 11 Agrobacterium_phage(25.0%) protease NA
DBSCAN-SWA_164 2235521 : 2248196 11 uncultured_Mediterranean_phage(33.33%) tRNA NA
DBSCAN-SWA_165 2270413 : 2273972 3 Gordonia_phage(50.0%) NA NA
DBSCAN-SWA_166 2281185 : 2287968 4 Oenococcus_phage(33.33%) NA NA
DBSCAN-SWA_167 2298854 : 2304087 2 Bacillus_virus(50.0%) NA NA
DBSCAN-SWA_168 2307586 : 2308522 1 Geobacillus_virus(100.0%) NA NA
DBSCAN-SWA_169 2323670 : 2324576 1 Prochlorococcus_phage(100.0%) NA NA
DBSCAN-SWA_170 2351510 : 2352872 1 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_171 2357911 : 2364152 5 Vibrio_phage(25.0%) NA NA
DBSCAN-SWA_172 2372077 : 2373352 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_173 2395709 : 2397461 1 Ostreococcus_lucimarinus_virus(100.0%) NA NA
DBSCAN-SWA_174 2417220 : 2419686 1 Dickeya_phage(100.0%) NA NA
DBSCAN-SWA_175 2443654 : 2452177 11 Moraxella_phage(20.0%) NA NA
DBSCAN-SWA_176 2466711 : 2467848 1 Ralstonia_phage(100.0%) NA NA
DBSCAN-SWA_177 2474974 : 2486820 9 Aeromonas_phage(20.0%) NA NA
DBSCAN-SWA_178 2507712 : 2509128 1 Erysipelothrix_phage(100.0%) NA NA
DBSCAN-SWA_179 2513118 : 2524609 11 Pseudomonas_phage(25.0%) tRNA NA
DBSCAN-SWA_180 2532926 : 2536377 3 Streptococcus_phage(50.0%) integrase NA
DBSCAN-SWA_181 2540718 : 2543238 1 uncultured_virus(100.0%) NA NA
DBSCAN-SWA_182 2546418 : 2549601 1 Leptospira_phage(100.0%) NA NA
DBSCAN-SWA_183 2570830 : 2571733 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_184 2576539 : 2581375 4 Serratia_phage(50.0%) NA NA
DBSCAN-SWA_185 2591948 : 2592686 1 Klebsiella_phage(100.0%) NA NA
DBSCAN-SWA_186 2599894 : 2601932 2 Agrobacterium_phage(50.0%) protease NA
DBSCAN-SWA_187 2625884 : 2629029 3 Tupanvirus(50.0%) NA NA
DBSCAN-SWA_188 2632851 : 2635869 1 Acinetobacter_phage(100.0%) NA NA
DBSCAN-SWA_189 2653423 : 2659052 4 Rhizobium_phage(66.67%) NA NA
DBSCAN-SWA_190 2666947 : 2667799 1 Trichoplusia_ni_ascovirus(100.0%) NA NA
DBSCAN-SWA_191 2672551 : 2679379 7 Bacillus_phage(33.33%) transposase NA
DBSCAN-SWA_192 2741113 : 2742775 1 Catovirus(100.0%) NA NA
DBSCAN-SWA_193 2763433 : 2765923 1 uncultured_virus(100.0%) NA NA
DBSCAN-SWA_194 2772485 : 2775275 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_195 2786420 : 2787833 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_196 2803525 : 2810010 6 Salmonella_phage(66.67%) transposase NA
DBSCAN-SWA_197 2822841 : 2829923 4 Streptococcus_phage(25.0%) transposase NA
DBSCAN-SWA_198 2840953 : 2842864 1 Synechococcus_phage(100.0%) NA NA
DBSCAN-SWA_199 2850265 : 2851291 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_200 2858077 : 2860780 1 Acinetobacter_phage(100.0%) NA NA
DBSCAN-SWA_201 2864006 : 2865542 1 Catovirus(100.0%) NA NA
DBSCAN-SWA_202 2872893 : 2875251 1 uncultured_virus(100.0%) NA NA
DBSCAN-SWA_203 2878852 : 2880064 1 Corynebacterium_phage(100.0%) transposase NA
DBSCAN-SWA_204 2887491 : 2890335 2 Ostreococcus_lucimarinus_virus(50.0%) NA NA
DBSCAN-SWA_205 2898792 : 2902026 1 Herpes_simplex_virus(100.0%) NA NA
DBSCAN-SWA_206 2913861 : 2917663 4 Streptococcus_phage(50.0%) NA NA
DBSCAN-SWA_207 2943996 : 2944779 1 Orpheovirus(100.0%) NA NA
DBSCAN-SWA_208 2953421 : 2957020 3 Agrobacterium_phage(50.0%) NA NA
DBSCAN-SWA_209 3008071 : 3011077 1 Acinetobacter_phage(100.0%) NA NA
DBSCAN-SWA_210 3018176 : 3029298 8 Wolbachia_phage(25.0%) tRNA NA
DBSCAN-SWA_211 3034571 : 3036160 2 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_212 3053308 : 3054652 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_213 3084344 : 3085100 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_214 3089603 : 3090635 1 Paramecium_bursaria_Chlorella_virus(100.0%) NA NA
DBSCAN-SWA_215 3096663 : 3102382 3 Hokovirus(50.0%) NA NA
DBSCAN-SWA_216 3116818 : 3118348 1 Catovirus(100.0%) NA NA
DBSCAN-SWA_217 3123548 : 3126467 1 Acinetobacter_phage(100.0%) NA NA
DBSCAN-SWA_218 3131089 : 3132592 1 Acinetobacter_phage(100.0%) NA NA
DBSCAN-SWA_219 3147180 : 3150321 1 Acinetobacter_phage(100.0%) NA NA
DBSCAN-SWA_220 3168830 : 3170516 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_221 3182884 : 3183403 1 Pseudomonas_phage(100.0%) NA NA
DBSCAN-SWA_222 3188377 : 3190633 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_223 3195043 : 3202474 6 Moraxella_phage(33.33%) NA NA
DBSCAN-SWA_224 3222544 : 3228313 4 Ostreococcus_tauri_virus(50.0%) NA NA
DBSCAN-SWA_225 3240008 : 3242950 2 Corynebacterium_phage(50.0%) transposase NA
DBSCAN-SWA_226 3246041 : 3254965 9 Synechococcus_phage(16.67%) protease,tRNA NA
DBSCAN-SWA_227 3263164 : 3263485 1 Streptomyces_phage(100.0%) NA NA
DBSCAN-SWA_228 3272044 : 3280807 7 Bacillus_phage(25.0%) NA NA
DBSCAN-SWA_229 3295879 : 3297055 1 Oenococcus_phage(100.0%) NA NA
DBSCAN-SWA_230 3313795 : 3314533 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_231 3318728 : 3323917 3 Erwinia_phage(50.0%) protease,tRNA NA
DBSCAN-SWA_232 3350165 : 3355995 4 Dishui_lake_phycodnavirus(66.67%) NA NA
DBSCAN-SWA_233 3361018 : 3365618 4 Pandoravirus(50.0%) NA NA
DBSCAN-SWA_234 3380017 : 3386079 5 Geobacillus_virus(50.0%) NA NA
DBSCAN-SWA_235 3391193 : 3396164 4 Mollivirus(33.33%) NA NA
DBSCAN-SWA_236 3407935 : 3410635 1 Stenotrophomonas_phage(100.0%) NA NA
DBSCAN-SWA_237 3426268 : 3427549 1 Shearwaterpox_virus(100.0%) NA NA
DBSCAN-SWA_238 3432743 : 3442912 17 Bacillus_virus(20.0%) integrase NA
DBSCAN-SWA_239 3448206 : 3461441 21 Rhizobium_phage(25.0%) terminase NA
DBSCAN-SWA_240 3465065 : 3468161 1 Klebsiella_phage(100.0%) NA NA
DBSCAN-SWA_241 3480461 : 3481004 1 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_242 3484315 : 3486567 5 Dunaliella_viridis_virus(50.0%) NA NA
DBSCAN-SWA_243 3491257 : 3496583 3 Bacillus_virus(66.67%) tRNA NA
DBSCAN-SWA_244 3504198 : 3504981 1 Cyanophage(100.0%) NA NA
DBSCAN-SWA_245 3512823 : 3516804 3 Paramecium_bursaria_Chlorella_virus(33.33%) NA NA
DBSCAN-SWA_246 3520920 : 3526766 5 Bacillus_virus(50.0%) NA NA
DBSCAN-SWA_247 3530384 : 3531365 1 Enterobacteria_phage(100.0%) NA NA
DBSCAN-SWA_248 3538106 : 3539159 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_249 3548781 : 3550173 1 Diachasmimorpha_longicaudata_entomopoxvirus(100.0%) NA NA
DBSCAN-SWA_250 3561487 : 3562854 2 uncultured_Mediterranean_phage(100.0%) NA NA
DBSCAN-SWA_251 3571378 : 3571654 1 Erwinia_phage(100.0%) NA NA
DBSCAN-SWA_252 3578106 : 3591476 13 Caulobacter_phage(28.57%) protease NA
DBSCAN-SWA_253 3601599 : 3607412 4 Leptospira_phage(66.67%) NA NA
DBSCAN-SWA_254 3611906 : 3618219 4 Streptomyces_phage(50.0%) NA NA
DBSCAN-SWA_255 3631722 : 3644968 13 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_256 3650525 : 3651737 1 Corynebacterium_phage(100.0%) transposase NA
DBSCAN-SWA_257 3692162 : 3693557 1 Enterobacteria_phage(100.0%) NA NA
DBSCAN-SWA_258 3702165 : 3703278 1 Prochlorococcus_phage(100.0%) NA NA
DBSCAN-SWA_259 3715541 : 3718340 1 Acinetobacter_phage(100.0%) NA NA
DBSCAN-SWA_260 3729873 : 3730563 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_261 3739236 : 3741363 1 Acinetobacter_phage(100.0%) NA NA
DBSCAN-SWA_262 3744668 : 3746213 1 Tetraselmis_virus(100.0%) NA NA
DBSCAN-SWA_263 3756481 : 3768309 10 Acinetobacter_phage(50.0%) NA NA
DBSCAN-SWA_264 3781762 : 3782980 1 Serratia_phage(100.0%) tRNA NA
DBSCAN-SWA_265 3808985 : 3810098 1 Prochlorococcus_phage(100.0%) NA NA
DBSCAN-SWA_266 3814382 : 3815780 1 Microcystis_phage(100.0%) NA NA
DBSCAN-SWA_267 3829035 : 3836618 7 Streptococcus_phage(25.0%) NA NA
DBSCAN-SWA_268 3840224 : 3841706 2 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_269 3850235 : 3850982 1 Trichoplusia_ni_ascovirus(100.0%) NA NA
DBSCAN-SWA_270 3873132 : 3875028 1 Organic_Lake_phycodnavirus(100.0%) NA NA
DBSCAN-SWA_271 3887015 : 3892316 5 Paramecium_bursaria_Chlorella_virus(33.33%) NA NA
DBSCAN-SWA_272 3911319 : 3912881 2 Escherichia_phage(50.0%) NA NA
DBSCAN-SWA_273 3920619 : 3921657 1 Organic_Lake_phycodnavirus(100.0%) NA NA
DBSCAN-SWA_274 3928204 : 3928438 1 Yersinia_phage(100.0%) NA NA
DBSCAN-SWA_275 3935565 : 3936288 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_276 3942103 : 3942856 1 Trichoplusia_ni_ascovirus(100.0%) NA NA
DBSCAN-SWA_277 3948601 : 3949534 1 Pithovirus(100.0%) NA NA
DBSCAN-SWA_278 3956801 : 3957410 1 Pneumococcus_phage(100.0%) NA NA
DBSCAN-SWA_279 3964309 : 3965311 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_280 3971709 : 3973173 1 Synechococcus_phage(100.0%) NA NA
DBSCAN-SWA_281 3988290 : 3989490 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_282 3996297 : 3999889 4 Leptospira_phage(50.0%) transposase NA
DBSCAN-SWA_283 4014556 : 4016026 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_284 4024432 : 4031895 5 Hokovirus(33.33%) NA NA
DBSCAN-SWA_285 4035214 : 4036356 1 Shigella_phage(100.0%) transposase NA
DBSCAN-SWA_286 4047558 : 4053133 6 Erythrobacter_phage(33.33%) NA NA
DBSCAN-SWA_287 4061840 : 4063040 1 Corynebacterium_phage(100.0%) transposase NA
DBSCAN-SWA_288 4068600 : 4072190 3 Corynebacterium_phage(50.0%) integrase,transposase attL 4056075:4056090|attR 4072709:4072724
DBSCAN-SWA_289 4078995 : 4081731 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_290 4096627 : 4098904 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_291 4108812 : 4112062 2 Caulobacter_phage(50.0%) tRNA NA
DBSCAN-SWA_292 4129762 : 4139250 9 Synechococcus_phage(14.29%) NA NA
DBSCAN-SWA_293 4143646 : 4144756 1 Enterobacteria_phage(100.0%) NA NA
DBSCAN-SWA_294 4151890 : 4154803 1 uncultured_Mediterranean_phage(100.0%) NA NA
DBSCAN-SWA_295 4158391 : 4158607 1 Lake_Baikal_phage(100.0%) NA NA
DBSCAN-SWA_296 4163789 : 4200399 45 Sinorhizobium_phage(15.0%) head,capsid,portal,tail NA
DBSCAN-SWA_297 4212686 : 4213373 1 Caulobacter_phage(100.0%) NA NA
DBSCAN-SWA_298 4234720 : 4237138 2 Helicoverpa_zea_nudivirus(50.0%) NA NA
DBSCAN-SWA_299 4250340 : 4253477 2 Planktothrix_phage(50.0%) NA NA
DBSCAN-SWA_300 4271325 : 4297708 22 Artogeia_rapae_granulovirus(25.0%) tail,transposase NA
DBSCAN-SWA_301 4316203 : 4316986 1 Mycobacterium_phage(100.0%) NA NA
DBSCAN-SWA_302 4320552 : 4321389 1 Mycobacterium_phage(100.0%) NA NA
DBSCAN-SWA_303 4340553 : 4351933 6 Acinetobacter_phage(66.67%) NA NA
DBSCAN-SWA_304 4372175 : 4376458 4 Salmonella_phage(33.33%) NA NA
DBSCAN-SWA_305 4380304 : 4381366 1 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_306 4390238 : 4390922 1 Campylobacter_virus(100.0%) NA NA
DBSCAN-SWA_307 4395156 : 4398435 2 Megavirus(50.0%) NA NA
DBSCAN-SWA_308 4403670 : 4405836 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_309 4415732 : 4416728 1 Only_Syngen_Nebraska_virus(100.0%) NA NA
DBSCAN-SWA_310 4420827 : 4424821 4 Rhizobium_phage(50.0%) NA NA
DBSCAN-SWA_311 4431264 : 4432395 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_312 4450164 : 4456362 5 Tetraselmis_virus(33.33%) NA NA
DBSCAN-SWA_313 4460886 : 4467574 6 Prochlorococcus_phage(66.67%) transposase NA
DBSCAN-SWA_314 4492713 : 4498337 8 uncultured_Mediterranean_phage(66.67%) NA NA
DBSCAN-SWA_315 4504731 : 4505178 1 Salmonella_phage(100.0%) NA NA
DBSCAN-SWA_316 4515879 : 4518218 2 Enterococcus_phage(50.0%) NA NA
DBSCAN-SWA_317 4522697 : 4524134 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_318 4527239 : 4532601 3 Klosneuvirus(50.0%) NA NA
DBSCAN-SWA_319 4538502 : 4540971 2 Pacmanvirus(50.0%) NA NA
DBSCAN-SWA_320 4568096 : 4568750 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_321 4573964 : 4574618 1 Pseudomonas_phage(100.0%) NA NA
DBSCAN-SWA_322 4581145 : 4581838 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_323 4596655 : 4609740 12 Bacillus_phage(40.0%) NA NA
DBSCAN-SWA_324 4628886 : 4637679 7 Acinetobacter_phage(25.0%) NA NA
DBSCAN-SWA_325 4647492 : 4687899 49 Burkholderia_phage(21.43%) terminase,head,integrase,capsid,portal,protease,tail,tRNA attL 4654195:4654212|attR 4667611:4667628
DBSCAN-SWA_326 4699902 : 4700499 1 Pseudomonas_phage(100.0%) NA NA
DBSCAN-SWA_327 4704613 : 4705150 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_328 4713458 : 4716697 4 Vibrio_phage(50.0%) NA NA
DBSCAN-SWA_329 4742664 : 4743486 1 Cronobacter_phage(100.0%) NA NA
DBSCAN-SWA_330 4757043 : 4760754 3 Bacillus_phage(66.67%) NA NA
DBSCAN-SWA_331 4777719 : 4778721 1 Bathycoccus_sp._RCC1105_virus(100.0%) NA NA
DBSCAN-SWA_332 4785422 : 4786253 1 Lactococcus_phage(100.0%) NA NA
DBSCAN-SWA_333 4792096 : 4792807 1 Listeria_phage(100.0%) NA NA
DBSCAN-SWA_334 4797571 : 4798465 1 Rhodococcus_phage(100.0%) NA NA
DBSCAN-SWA_335 4805333 : 4805933 1 Emiliania_huxleyi_virus(100.0%) NA NA
DBSCAN-SWA_336 4827108 : 4828803 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_337 4856806 : 4858981 3 Indivirus(50.0%) NA NA
DBSCAN-SWA_338 4886930 : 4894947 8 Bacillus_phage(40.0%) NA NA
DBSCAN-SWA_339 4898638 : 4902091 4 Synechococcus_phage(33.33%) tRNA NA
DBSCAN-SWA_340 4906373 : 4910106 3 Shigella_phage(50.0%) transposase NA
DBSCAN-SWA_341 4919425 : 4920637 1 Corynebacterium_phage(100.0%) transposase NA
DBSCAN-SWA_342 4923916 : 4925359 1 Burkholderia_phage(100.0%) NA NA
DBSCAN-SWA_343 4938125 : 4946194 7 uncultured_Caudovirales_phage(33.33%) transposase NA
DBSCAN-SWA_344 4954937 : 4957270 3 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_345 4962790 : 4965564 2 Moumouvirus(50.0%) NA NA
DBSCAN-SWA_346 4973583 : 4974609 1 Salmonella_phage(100.0%) NA NA
DBSCAN-SWA_347 4996978 : 4999858 1 Klosneuvirus(100.0%) tRNA NA
DBSCAN-SWA_348 5011737 : 5014162 3 Moumouvirus(50.0%) NA NA
DBSCAN-SWA_349 5020644 : 5021856 1 Corynebacterium_phage(100.0%) transposase NA
DBSCAN-SWA_350 5028432 : 5030569 2 Enterobacteria_phage(50.0%) integrase attL 5017409:5017427|attR 5033042:5033060
DBSCAN-SWA_351 5049410 : 5050457 1 Dickeya_phage(100.0%) NA NA
DBSCAN-SWA_352 5055894 : 5056353 1 Pandoravirus(100.0%) NA NA
DBSCAN-SWA_353 5061538 : 5068792 7 Enterobacteria_phage(33.33%) NA NA
DBSCAN-SWA_354 5080849 : 5081740 1 Mycobacterium_phage(100.0%) NA NA
DBSCAN-SWA_355 5086422 : 5087196 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_356 5090577 : 5094620 4 Streptococcus_phage(50.0%) tRNA NA
DBSCAN-SWA_357 5102776 : 5103475 1 Rhizobium_phage(100.0%) NA NA
DBSCAN-SWA_358 5115648 : 5116848 1 Corynebacterium_phage(100.0%) transposase NA
DBSCAN-SWA_359 5120534 : 5121182 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_360 5125001 : 5126297 1 Aeropyrum_coil-shaped_virus(100.0%) NA NA
DBSCAN-SWA_361 5134365 : 5135115 1 Lactococcus_phage(100.0%) NA NA
DBSCAN-SWA_362 5155589 : 5171837 18 Bacillus_virus(25.0%) tRNA NA
DBSCAN-SWA_363 5176862 : 5178041 1 Pandoravirus(100.0%) NA NA
DBSCAN-SWA_364 5185372 : 5187241 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_365 5234239 : 5237378 2 Catovirus(50.0%) NA NA
DBSCAN-SWA_366 5242072 : 5243365 1 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_367 5250988 : 5251231 1 Azospirillum_phage(100.0%) NA NA
DBSCAN-SWA_368 5257553 : 5258120 1 Salicola_phage(100.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
3. NZ_CP020927
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 5098 : 60421 51 Lactococcus_phage(25.0%) transposase,integrase attL 48256:48270|attR 63663:63677
DBSCAN-SWA_2 70366 : 110258 33 Caulobacter_phage(14.29%) transposase,integrase attL 86851:86865|attR 110704:110718
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage