CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP011300	Devosia sp. H5989, complete genome	2 crisprs	csa3,WYL,DEDDh,cas3	0	0	7	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP011300_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011300_1

111005-111093

Orphan

Consensus_repeat	Method
TGGGGAGGGATCGAGGGTGGGGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP011300_1

>merge|NZ_CP011300|1|111005-111093|CRISPRCasFinder
TGGGGAGGGATCGAGGGTGGGGGTGGGTTGCAGACGCCGTGGCCCGTTGGTGCCCCAAAACCTCCCTGGGGAGGGATTGAGGGTGGGGG

>NZ_CP011300|1|1|111005-111093|CRISPRCasFinder
TGGGGAGGGATCGAGGGTGGGGG	TGGGTTGCAGACGCCGTGGCCCGTTGGTGCCCCAAAACCTCCC
TGGGGAGGGATTGAGGGTGGGGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011300.1\|WP_049704072.1\|118786_120325_-\|cell-wall-hydrolase	unknown	unknown	gnl\|CDD\|377847
NZ_CP011300.1\|WP_082201835.1\|112731_114336_-\|iron-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224099
NZ_CP011300.1\|WP_049704073.1\|120329_123200_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011300.1\|WP_049704067.1\|109078_109918_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224094
NZ_CP011300.1\|WP_049704062.1\|97890_99261_+\|carbohydrate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|224567
NZ_CP011300.1\|WP_049704064.1\|105260_106271_+\|glycerol-3-phosphate-ABC-transporter-ATPase	unknown	unknown	gnl\|CDD\|236947
NZ_CP011300.1\|WP_049704076.1\|125239_125854_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011300.1\|WP_049704070.1\|114398_115427_-\|iron-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270260
NZ_CP011300.1\|WP_049704074.1\|123200_124583_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011300.1\|WP_049707809.1\|99420_100431_+\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224096
NZ_CP011300.1\|WP_049704071.1\|115504_118294_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_CP011300.1\|WP_049704075.1\|124582_125131_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011300.1\|WP_049704068.1\|109914_110868_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223674
NZ_CP011300.1\|WP_049704063.1\|102232_103336_-\|LacI-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380665
NZ_CP011300.1\|WP_082201833.1\|100430_101627_+\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
NZ_CP011300.1\|WP_049704077.1\|125854_126316_-\|N-acetyltransferase	unknown	unknown	gnl\|CDD\|379228
NZ_CP011300.1\|WP_082201834.1\|107388_109143_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224048
NZ_CP011300.1\|WP_049704069.1\|111180_112665_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|173859
NZ_CP011300.1\|WP_049704065.1\|106335_107388_+\|membrane-dipeptidase	unknown	unknown	gnl\|CDD\|366534
NZ_CP011300.1\|WP_049707811.1\|103531_105187_+\|alpha-glucosidase	unknown	unknown	gnl\|CDD\|200469

Protein	Function_ID	Function_description	E-value
NZ_CP011300.1\|WP_049704072.1\|118786_120325_-\|cell-wall-hydrolase	gnl\|CDD\|377847	pfam07486, Hydrolase_2, Cell Wall Hydrolase. These enzymes have been implicated in cell wall hydrolysis, most extensively in Bacillus subtilis. For instance Bacillus subtilis steB is expressed during sporulation as an inactive form and then deposited on the cell outer cortex. During germination the the enzyme is activated and hydrolyzes the cortex. A similar role is carried out by the partially redundant Bacillus subtilis CwlJ. It is not clear whether these enzymes are amidases or peptidases.	1.66467e-18
NZ_CP011300.1\|WP_082201835.1\|112731_114336_-\|iron-ABC-transporter-permease	gnl\|CDD\|224099	COG1178, ThiP, ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism].	1.26949e-80
NZ_CP011300.1\|WP_049704067.1\|109078_109918_-\|ABC-transporter-permease	gnl\|CDD\|224094	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	2.16297e-82
NZ_CP011300.1\|WP_049704062.1\|97890_99261_+\|carbohydrate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|224567	COG1653, UgpB, ABC-type sugar transport system, periplasmic component [Carbohydrate transport and metabolism].	1.20622e-33
NZ_CP011300.1\|WP_049704064.1\|105260_106271_+\|glycerol-3-phosphate-ABC-transporter-ATPase	gnl\|CDD\|236947	PRK11650, ugpC, sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC.	4.03044e-178
NZ_CP011300.1\|WP_049704070.1\|114398_115427_-\|iron-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270260	cd13542, PBP2_FutA1_ilke, Substrate binding domain of ferric iron-binding protein, a member of the type 2 periplasmic binding fold superfamily. FutA1 is the periplasmic component of an ABC-type iron transporter and serves as the primary receptor in Synerchosystis species. The periplasmic iron binding protein plays an essential role in the iron uptake pathway of Gram-negative pathogenic bacteria and is critical for survival of these pathogens within the host. After binding iron with high affinity, FutA1 interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The iron- and thiamine-binding proteins belong to the PBPI2 superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	2.51373e-143
NZ_CP011300.1\|WP_049704077.1\|125854_126316_-\|N-acetyltransferase	gnl\|CDD\|379228	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	8.44453e-05
NZ_CP011300.1\|WP_049707809.1\|99420_100431_+\|sugar-ABC-transporter-permease	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	1.32593e-67
NZ_CP011300.1\|WP_049704071.1\|115504_118294_-\|sensor-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	5.67654e-16
NZ_CP011300.1\|WP_049704068.1\|109914_110868_-\|ABC-transporter-permease	gnl\|CDD\|223674	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	2.86583e-110
NZ_CP011300.1\|WP_049704063.1\|102232_103336_-\|LacI-family-transcriptional-regulator	gnl\|CDD\|380665	cd20010, PBP1_AglR-like, Ligand-binding domain of DNA transcription repressor specific for alpha-glucosides (AglR) and similar proteins. Ligand-binding domain of DNA transcription repressor specific for alpha-glucosides (AglR) which is a member of the LacI-GalR family of bacterial transcription regulators. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type I periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA binding affinity of the repressor.	7.68696e-71
NZ_CP011300.1\|WP_082201833.1\|100430_101627_+\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	7.9097e-70
NZ_CP011300.1\|WP_082201834.1\|107388_109143_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224048	COG1123, COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only].	0
NZ_CP011300.1\|WP_049704069.1\|111180_112665_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|173859	cd08494, PBP2_NikA_DppA_OppA_like_6, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold. This CD represents the substrate-binding domain of an uncharacterized ATP-binding cassette (ABC) type nickel/dipeptide/oligopeptide-like transporter. The oligopeptide-binding protein OppA and the dipeptide-binding protein DppA show significant sequence similarity to NikA, the initial nickel receptor. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	0
NZ_CP011300.1\|WP_049704065.1\|106335_107388_+\|membrane-dipeptidase	gnl\|CDD\|366534	pfam01244, Peptidase_M19, Membrane dipeptidase (Peptidase family M19).	8.95978e-112
NZ_CP011300.1\|WP_049707811.1\|103531_105187_+\|alpha-glucosidase	gnl\|CDD\|200469	cd11330, AmyAc_OligoGlu, Alpha amylase catalytic domain found in oligo-1,6-glucosidase (also called isomaltase; sucrase-isomaltase; alpha-limit dextrinase) and related proteins. Oligo-1,6-glucosidase (EC 3.2.1.10) hydrolyzes the alpha-1,6-glucosidic linkage of isomalto-oligosaccharides, pannose, and dextran. Unlike alpha-1,4-glucosidases (EC 3.2.1.20), it fails to hydrolyze the alpha-1,4-glucosidic bonds of maltosaccharides. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	0

>NZ_CP011300.1|WP_049704068.1|109914_110868_-|ABC-transporter-permease
MSLYLLRRFLGFAITLVVAAAAVFFLLDRLPGDPAQFILGINASPDAVASLRNQLGLDLPLWQRFTDWLLAMFRGDFGVSYTQSAPVAALIGERLWVTLPLAGFAMVLSMAIGLPIGILAARRRGSWLDTGLMLLAQMGIAVPNFWFGMLLVLLFSITLRWLPPGGFTPWQEDFWAALRAMVLPSLALALPQAAILARVMRTALVDVQNADFIRTARAKGMALGEAVWRHGVRNALLPILTILGLQFAFLISGTVVVENIFYLPGLGRLIFTAISERDLILVRGAVIILIAAVTASMFIVDVLYAVVDPRLRGGQQP
>NZ_CP011300.1|WP_049704067.1|109078_109918_-|ABC-transporter-permease
MNRRWHPSLVIGLVGTAIFLALALTSLFWTPYPIDQIDLARKFAGPSPEHWLGTDFFGRDMLSLVMAGTLTSFVVAAIAVAIGMVIGVPLGLIAAAWGGPVEWLVLRVNDFLFAFPAIITAILITALFGPGATNAMIAIGIFNIPVFARVARGGALSLKSLDYIGAARLAGMGNWEISLRHLLPNVASLLIVQATIQLALGILAEAGLSYVGLGTQPPATSLGLMLKDAQSIFLLHPWLTYVPGLSIVLIVISLNLAGDGLRDMLDPRLKREGLANAAA
>NZ_CP011300.1|WP_082201834.1|107388_109143_-|ABC-transporter-ATP-binding-protein
MACATCSILASSGRAWPMPLLELDDLSVVFDGPPVLAGVSFALEKGERFGVIGESGSGKTMMALAIAGLLPEGARRGGAIAFDGQRLPEGERELARLRGRRIAMVFQEPLTALNPLMRVGAQIAEAIALSKTNASVEALLGEVGLDPVHARRYPHELSGGQRQRIMIAMALAGEPDLLIADEPTSALDLITQRTIIDLIAAVCDRRGMALIFVSHDLRAVAALCTRVLVLRQGAVMETGPATDVFAAPRAEYTRQLIAAARPTIGAVFAPAGAPPLLEVRNLSRHFRQPGAAWFAPGQPMAAVNGVSFSVAASESVAIVGPSGCGKTTLARIIAGLDRATGGEMILDAGAHRPVHPYPRTSPAAEPGPTGPSTSEERGDDPRIKSGAIQWRGSGRTLPTSTYHGSDLPRALRRDISLVFQDPYGSFDPRLEVGRAVGEPLRLERGLAPADRLRRVSEAVQAVGLSPALLGRYPHEFSGGQRQRLAIARALVTRPRLVILDEPVSALDVSLRGDVLALLNRLRADYGLAYVVISHDLDMVRAVSDRVLVMEKGTIVEEGRPAEIFAHPQHRLTRELLAARLPDVA
>NZ_CP011300.1|WP_049704065.1|106335_107388_+|membrane-dipeptidase
MTPIPVFDGHNDVLLRLLNDYAADPTKAFIEGTRDGHLDLPRARRGGFVGGFFAMFPPNPKKTDFTAPGAIGGNPPLPAPLTLEEGRASTLAMTRILLDLTRAENSPVALCRSRAEIDAAIAAGRIAALMHIEGAEAIDANLDMLEVLYAAGLRSIGPVWSRANIFGTGVPFHFPASPDVGPGLTEAGKDLVRACDRLGMVIDLSHLNEAGFWDVAKVSKAPLVATHSNVHAICASARNLTDKQLDAIAESNGMVGLNFATGFLRPDGAMRADTDIEIMVRHLDYLIEKLGENRVGLGSDFDGANIPAAIGTVAGLPVLIDALKAHGYDEALIGRLACGNWLDLIERVIG
>NZ_CP011300.1|WP_049704064.1|105260_106271_+|glycerol-3-phosphate-ABC-transporter-ATPase
MSDLKISNLYKRYGSVEILKDVNLEIKSGEFIVFVGPSGCGKSTLLRCISGLETISSGTLEIDGRVVNEVAPSKRGIAMVFQSYALYPHMNVFDNMAYSLKLQHASKEEIKSKVEAAAAKLQLTPYLDRLPKALSGGQRQRVAIGRAIVRDPKVFLFDEPLSNLDAALRVATRLEIARLKESLPNTTMIYVTHDQVEAMTLADRIVVLNAGRVEQVGTPMELYDNPQSLFVAGFIGSPKMNFLTGKYAEKYKAATVGVRSEHLEITPNGNGDWHGKVIYSENLGSDSYIYVDIGEGEPIVVRQNGKATYHSGDTLSFAPVGEQFHRFDADGRPLAN
>NZ_CP011300.1|WP_049707811.1|103531_105187_+|alpha-glucosidase
MTETKPVEPAPVDKDWWRGAVIYQIYPRSFQDHNGDGIGDLVGITERLEHVADLGVDAIWLSPVFTSPMKDFGYDVSNYRDIDPSFGTLGDFDRLVEKAHRLGLKVIIDQVISHSSDKHPWFAESRQSRTNEKADWYVWADPNPDGTPPNNWLSIFGGSAWTWDSRRMQYYLHNFLVSQPDLNFHNKHVQDALLGEMRFWLDRGVDGFRLDTVNFYFHSEGLESNPVVKPEDFNASTAPAVNPYNFQEHLYDKSRPENLKFLKRLRALMDEYPGTTTVGEIGDSQHQLEVMAQYTTGGERLHMAYTFDYLGGTFSAEHFHQAIANTEAQAPEGWICLAFSNHDVVRHVSRWATHGQQEAFTRLAAQLLLTMKGSVCLYQGEELGLTEAELAFEDLVDPYGIEFWPEFKGRDGCRTPMVWQANAHLGGFSTAPRSWLPVPFDHLTRAVDTQVNDPDSVLSFYRAFVAFRKKHPALVKGDIDLVDAPEGVLAFVRTVSNDKLLCIFNMSEKPVVFSIPEGMAPKGVDAPGVVAQPENGSLSLAPFGAYIGSLL
>NZ_CP011300.1|WP_049704063.1|102232_103336_-|LacI-family-transcriptional-regulator
MDKKSNKAGPLAVNSGRNVTIKDLAGELGLSITTISRALSGYTDVGENTRKRVEEAATRLGYRPNRNAQRLVTRRTHNIGWVQPDNERKFLDPHFVEVMAGVLRGARARNYDIVMTSATADHEMATYDRYVKDNSVDGFIVDLPREGDPRIDYLLEAGRPFVVHGRESRHARYGWVDVDNYANFYRLARLLAANGHRNIAFINGDERFIYADTRRRAVEDALSDFGIGTAGLRVYNSLHPMGEVGFKLTTEALRDGAVTAVLYSSILMAIEGHNAVVRAGRTVEKDIAIATMDDVLHYLDIDHVAESLTFVRSSLQEAGVAIVEEISRQCDRHGAPSGTIIPSTFHVLPGWDAQSLDLPIPERAGMY
>NZ_CP011300.1|WP_082201833.1|100430_101627_+|carbohydrate-ABC-transporter-permease
MTSIASDIDVPRGAEGRAKPAIRLDLGRLAAHLMLLAFVVVWTIPTVGLLVSSIRDKDQLAVSGWWTALTPSVSTGASRVGLPADAVQENGKYVIRGNLLGSDTNKTVQSFGTTNADVSAAQAGASLPMRDGGTITVETSGEYQWVSDTPFTHTAGPRIYYTAGIAPRFTLENYASVINANGIGRAFINSFTVTVPSTIIPILIAAFAAYALAWMRFPGRGWIVALVVGLLVVPLQMSLIPLLRLYNGVATTFGTESKTYLGIWLAHTAFGLPLAIYLLRNYMAGLPKEIMESARMDGASHFKIFTTMVLPLSFPALASFSIFQFLWVWNDLLVALVFLGAQDDKLVLTGKLVNLLGSRGDKWEILTAGAFITMIVPLLVFFSLQRYFVRGLLAGSVK
>NZ_CP011300.1|WP_049707809.1|99420_100431_+|sugar-ABC-transporter-permease
MEQIVGAILTVLIGVAGCVVYFWGTNWLLDRFLATNQSMTGEVVTRRDYLRSQVRPWLFLAPALVFLTVYLIYPVFETARLSLFDSQGINFVGFSNYLWAFRDSTFLQSVFNNIIWLLIVPAASTFFGLVIAVLADRLWWGNIAKSLIFMPMAISFVGASVIWKFIYDYRGPGQEQIGLLNAIVTGFGLPPQAWITIPFWNSIFLMVILIWIQTGFAMVILSAALRGIPEETLEAARIDGANDFQIFYGIMIPQIWGTIVVVWTTITITVLKVFDIVLAMTNGQWDTQVLANLMFDWMFRGSDFGRGSTIAVIIMLAVTPIMVWNIRRANAEEGTR
>NZ_CP011300.1|WP_049704062.1|97890_99261_+|carbohydrate-ABC-transporter-substrate-binding-protein
MHKLLLAGVSAIALALTGISGASAQDLKFPKGEGAFSWKALDDFAAAHKGLEGQKLTIWGPWREGGDKEQFETVLAYFKDATGIDVSYASSENYEQQAVIDTAAGSAANITILPQPGLLADLASKGYLTPLGDDLAARVKEEYAAGDSWVSLGTYKGKDGNPAFFAVPYKADLKSLVWYSPDNFAEKGYEVPQTFEDMMALSKKIIADGGTPWCIGLGSGGATGWPATDWIEDIMLRTQSPEDYDKWVTNDLKFNDPKVVGALDIFGEIAKDDKMVAGGAKAVGTTDFRDSPKGLFTVPPQCYMHHQASFIPSFFPEGTQLGTDASFFYFPPFADKDLGKPVLGAGTLVTITKDSPTAKAFIDFVQNPISNEIWMAQSGFLSPLKSANIETYGNDTLKGEGKILLDATTFRFDGSDMMPGAIGAGAFWTGMVDFVNGKSSQDVADEIQKAWDSIKK
>NZ_CP011300.1|WP_049704069.1|111180_112665_-|ABC-transporter-substrate-binding-protein
MMLKKTLIAAALALLASTGMAMAARTDIRIGLVLEPTALDPTTAAGAATKEVTYLNIFEGLTQLDQNGAVQPLLATSWTISPDNTVFTFKLAPDVKFHDGTPFTADDVKFTFDRLLAPDSTNSQKQLYVDAIDTVTVIDPTTVEFKLKAPSGNFLFDIGRGAAVIVSPKSEATNATKPIGTGPFRFVQWDKGSRVVLERNPDYWGKAPALEKATFVFIGDPATAVSALLAGDVDGFNNFAAPEAVDIFKANPAFTVAVGTTEGETILATNNKRKPFDDLKVRQAIAHAINRQELIEGAGHGFGVPIGSHFAPAHPYYIDLTNTYPFDPAAGKKLLAEAGYPDGFSTTIKLPPVPYARLGGQILAQQLAAIGIKAQLINVEWAQWLTDVYTNHDFDLTVISHVEPFDIGIYANPNYYFGYDDPEFQAIIAKLNATTDEAQRKDLAQQAQKRLADQAVNGFLFELAQVGVWNSKVEGYWLNAPIEGVVLKGIHWVD
>NZ_CP011300.1|WP_082201835.1|112731_114336_-|iron-ABC-transporter-permease
MPLSAFGLLLIMGLPLLWLIGAAVMAGFSGDNGLAASMLPVAFRETAVLMVSVGLITGIVGLVAAWLTTHFDFPLRRFFDWALILPLAVPTYLAAYCYTEFLDFTGPVQQAIRALTGASTIKEYWFPNIRSNGGAVLVMSLVLYPYVYTSCRAFFLMQSGAVTAASRVLGASGLRTFFAIVLPLSRPALIVGVTLAMMEVVNDLGAVQYFGVNSLTAVIYATWINRGNFGGAAQLAVMIVLVIGVLILAEQWARRNRIYLAHRDSRTPPPRERLRGGRAAIAFGFCLVLLGAGFGVPFFQLLDLSLRQASVADLAPTLGALTTTVGLATGGALITVAIGLYAAKKSNGGKTARNVIRLATLGYAMPGTVLALGLLQPLGLGDRWLNYFTRWAFDWMPGLVLSGSAIALLYVYAIRFLAVSHSTLDAAIKKRGQSMLDAGRVLGAKGIDLLVRVDLPTLAPALLSAATLVFVEIIKELPATLLLRPLGVETLSTQVYAKANAALFADAALPALAIVLAGLVPVILATHLSARRKV
>NZ_CP011300.1|WP_049704070.1|114398_115427_-|iron-ABC-transporter-substrate-binding-protein
MKTFATALGLLALIAATPVCAQSGVVNVYSYREPGLIQPLLDLFSQETGIKTNVLFAGDGLIERVAAEGELSPADVIVTVDIGNLANAKDLGVSQAIPAEALARVPAAYQDPDGQWVALSLRARVFYASKDRVTETALTYEDIAKPEWKGRLCTRSGQHVYNIGLIATRIAHWGVDKTRDWLTNVRDNLNGKPTGADRDQVKQILQGTCDLAIGNTYYMGLMLNNDAQPEQKEWAASARIIYPDADGEGTQVNVSGAIITKYAPNKDNADKLVEFLLSDEAQHIYASSNYEFPVVAGVEPSELVASWGELKADKTPLTEIAAHRKEASALVDELKFDDGPQN
>NZ_CP011300.1|WP_049704071.1|115504_118294_-|sensor-histidine-kinase
MGHWADARPAWLWSGDGAELLWRNGAARLFLAKIKKSGPKLLASPVPIKGQVPRLIRLGTTGRSSLSRIQFLAGDKPISATCAVTPLQLADGSNGLLIVAVDPIDSTLLPEATPDDVTRRWLPQGSQYLVLDRDQRVVAASPLASNLGDALATVEGGGSITLDSHLYVPGKYSAGPAGETLIVLERSEAPQAIVAPAVPVAEPEEPPAPEAELEAWAEADGPEELPDSAVDTRVDPEWAEVEAAARATLEAPEFAPVADEPEPELAEEPEVHEPAPAETGRLSGLFEKLSHDEELYAPLPPSEEEAGEDVAPVEPEPEPEPASPALVRVVARRFTPLVSEGAQADELPADEAAPNESLAATEIEQASGEDVAPAEEPVVPPQTEEPVADPEAVERVSRYNFDELSRILNDRVSGELGPQSRRTTIEEIIEGDGAAAPAASPPAPAASGSLVNLGGETLVLNRLPLGILVFRDQQVLFANRAITEMIGYDSVESLRNAGLASIFPAASDEQPESGPVNHLVQRDGTLVPVTARLQSISWQGRPALMLSASATEVRTGHEGAVRAFAEMLAETREDGFVEANRAGVISGATPHALVALQRGTEQLVGRPLTAIIDRQDHPALQAFLERPARFAETARPVLVARGIEPGVEVMLFAQGQAGIVTGYFGFVRRREGASALPAPKGGDSDPALLGRLSRGLRRPLNTIIGFSDLIGSAAFGEIGNPRYREYALDIKTAGQEITALVDELDDFTRLRDGRYAPRPSDVDLGALLESCVIRVRGQANGARVLVRSAISERLPRIRADRASLGQAVLNLLASAIDQTPVGGAVVLSSQLEDDGSISVHVRDSANRHVDQSERFVVFRDGVSKDGETLTPIRSTVGLALTRSLLAVNACSLSVDPAGSVGTIFSLLIPRELVTRDALPAPADEADPAP
>NZ_CP011300.1|WP_049704072.1|118786_120325_-|cell-wall-hydrolase
MADFEDIINTLIAEANAEGPEGMRRVGETILNRAAQSGLTPGQVVRQPHQYTGYWSPGPAARRAQQSDQVRTAAEAAWALAQQPGDPTNGADHYFNPAVVTPSWASAMRPTGTFGGHAFYADRAVPAEALAALLTPAVAPSPAGGLQRQIAYENAGRPQPQVPTPAGSLQRQFAYENAGTPDALASFGIRPTAQTVSSIADLFAKPSNATPILQSNGRLVDPAAAALWQDTPKIFAGGFGSLTPDVVTPTKRSVQSVAMSAAPRIDGVGRTPSFNELTDVFGAQPKTASEQLAKTGVIRTTNRIAGTAALPPGVRPNVTVPGGVNMNDTGKMPSFSSLADMFGTPDRLMPSERDVDVVSLDVANPYGIDVMPYEDFAPQARVADVPLPRKVPQRPMATPVKKTVAVTRPAPVPASPALGYAPSSGGKQSSAATAIAKMFEPAGTLRAGRNGYAYAADGNGGYKQVGTFRPAGMSAQQQASALAAAAYRPTNAWERMVARESSGDGGARSLTS
>NZ_CP011300.1|WP_049704073.1|120329_123200_-|hypothetical-protein
MARIIQFQGRRIQVPDAATEDQVREILQRSAGGGTPPGPPLVESAALAPAPATVEPSTTPDPYFSDLPVPGSPAGPAPEEQSLVDMIAGGAAGAGGVALQGLHGVATGIENFVGLPGDLVDALGISDGVPIIGQLPTSRDLNTLSRLGGILPERSKPSGPLQTVVNRVGEELGANLLPVAGVEATAIRRGLPAIREAGGWARYLLEPAAVDPAKFAAKEMAAAGAAGLGAGAANLAVDRNTVPGQFADLVGALSGATLYGAGAAVGRGAGQVLNALRQNPNYIDQTVKDAVVDRILNNSQIPGVQGALASDPLNADAVIDAIMSPTRKRPSEVIPGYQESLADVTGDPGLAALEYSRQSGPNAGDFVARRGANNELVDAVMRNAAPTETPGAFRSELEAVRDARLAAAAEGTQSAQDQFNSIIQGLAPSMLAEERGNTIRQGLQNAERAARDVESAAWRGIDAQVEPGPLADTLDQTIDRLSLARRQNIADVEPTAGIPRQLAGAPDAPNGPTSIQELIDMRSALLREQRVALSGPQPDRNRGEAIGQLIDDINAYLDSDAVPLDVRQQTDQARAVSRDVNERFNRPNDPISSALSTSQGRPDLPDSAVGPTFVKPDSKQASNIDRLLAETDLTSHGASVREAVKDEILSGAQTRITDPDRLEQYLNQFTRAFDRFPDLREEVRSAISAGRALNEAGAAETTLVRDVGSADGSIKGKSPVGRYLQYSDAQPEKAINEVLNAKDPGAAADELLTFIGDNPRAVEGARAAFWQKLKTESQSVDNAQRTMGGTRAWRGDWLKSFLDNPATAAVAERLYKDNPEALANLRDYATVLDNVDLRQRGKAVGTSGTAQGVNPVLTPETLQSRFYAYMRGQVSGTYLATSIAAVVARRAVRNAQSAAIDRLTDRVLLNPDLAAELLKENNPANRAALARKAKLWLGNEASTVLDLINGNDEETE
>NZ_CP011300.1|WP_049704074.1|123200_124583_-|hypothetical-protein
MAIALNAGYNSPEIAAVAQNIAQMFGPPSASELAGYSTAALNRQKHEQIAQLFGEGQTPSERAALVGIQNYGQTPQGFTYQVDQNNATQRYGFDTQAATSRANTADTNRTSLIGNMFGALNEGQVRPTLPGDIAGMYGLPELPAVAGAPKPLTADQVIGGQTQRLINSGQINDETIKSMIVGDTPVENIVGPDGKPLTVFRNNAVGAEPYINPGAAAKPTNGVAILKDGTKVPATQGPDGRWRHAQTGEELPADIQVFGVPQAQGTAEEVGMVSKPTGSQIEQQLIDIAVAKQTATTLRDLIAQSPSSQGAVGWLRGTAQNVIQTGGELGKFFGGNVEEITKEIEKGLADADLAGAFDPNIPAIDMLANLLAFQYAKTTTGERLSNEMLNASRRALGLDGLDANQANSLARLNQAIKQIEAQESLLKKARTGGVDALTPDAPAGEEVWDFDQNGNLVRVQ
>NZ_CP011300.1|WP_049704075.1|124582_125131_-|hypothetical-protein
MLAAETKRQQGFNQEAAQLNDQSQERYVGFVPQQEQRATELADMFASDVGDPNSPTASVMPLSSSDIVNNETTKQMGAAQDYVDQQAGALADLRSFGDLLGSKSLLQARDASKIGQIGGFKQASQAITPYELDNANKAGDGLKLFGDVLRMGGTVLTGAGINGGSLANMFGGNAATAGSWGL
>NZ_CP011300.1|WP_049704076.1|125239_125854_-|hypothetical-protein
MVGGGGNNAAQDIRNEEAARQERVRTGAKKIEDMFGGQFTDDYFNTQRDNYTAYALPQLTDQHKDAAKQLAFALDRRGALDSSSRASLEANLEKRRALAETEIKDRANAYRTEAMAGVEGARSDLINTLNATGDVEGAVNSANARAKVLSQPPAYSPIAQAFVDFTSGLGMQAAAEKAFAYGAGPKPTFSTGLFAPRAGSVVNG
>NZ_CP011300.1|WP_049704077.1|125854_126316_-|N-acetyltransferase
MHVRLIEERDESEVVRLARAYACEVADVLPHVDFDEAVVRRSVFRSLTTADPTVFVADHGSGLAGMLVASIQGFYFMGGVWTSADIFYVHPDFRGTRAAALLLAEFNTWSDNLGAKVNFGGNANKLNSDRTARFQRRFGYQQAGLSMMRLKGA

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Crispr_ID: NZ_CP011300_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011300_2

178593-178692

Orphan

Consensus_repeat	Method
GGACTTCTTAGAAGTCCATGCCGCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP011300_2

>merge|NZ_CP011300|2|178593-178692|CRISPRCasFinder
GGACTTCTTAGAAGTCCATGCCGCCATTTCGGGCCGGCTCGACCGGCCCGAACACTCTTGGACTCTTGGGCGTTTGGACTTCTTAGAAGTCCATGCCGCC

>NZ_CP011300|2|2|178593-178692|CRISPRCasFinder
GGACTTCTTAGAAGTCCATGCCGCC	ATTTCGGGCCGGCTCGACCGGCCCGAACACTCTTGGACTCTTGGGCGTTT
GGACTTCTTAGAAGTCCATGCCGCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011300.1\|WP_049704140.1\|181057_181381_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372360
NZ_CP011300.1\|WP_049704136.1\|177774_178176_-\|HicB-family-protein	unknown	unknown	gnl\|CDD\|374224
NZ_CP011300.1\|WP_049707820.1\|185421_186396_+\|bifunctional-riboflavin-kinase/FAD-synthetase	unknown	unknown	gnl\|CDD\|235536
NZ_CP011300.1\|WP_049704139.1\|180831_181017_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011300.1\|WP_049704134.1\|174735_175482_+\|membrane-protein	unknown	unknown	gnl\|CDD\|182593
NZ_CP011300.1\|WP_082202417.1\|181657_183094_-\|sigma-54-dependent-Fis-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225114
NZ_CP011300.1\|WP_053167668.1\|187561_189193_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224108
NZ_CP011300.1\|WP_049707819.1\|177452_177674_+\|DUF2798-domain-containing-protein	unknown	unknown	gnl\|CDD\|378657
NZ_CP011300.1\|WP_049704145.1\|187000_187558_-\|16S-rRNA-(guanine(966)-N(2))-methyltransferase-RsmD	unknown	unknown	gnl\|CDD\|223813
NZ_CP011300.1\|WP_049704142.1\|183260_184475_+\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|376350
NZ_CP011300.1\|WP_082201848.1\|178180_178381_-\|type-II-toxin-antitoxin-system-HicA-family-toxin	unknown	unknown	gnl\|CDD\|377942
NZ_CP011300.1\|WP_082201847.1\|175483_176581_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|276807
NZ_CP011300.1\|WP_049704143.1\|184492_185359_+\|TIGR01459-family-HAD-type-hydrolase	unknown	unknown	gnl\|CDD\|319827
NZ_CP011300.1\|WP_082201846.1\|173533_174733_+\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|133022
NZ_CP011300.1\|WP_049704135.1\|176926_177160_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226045
NZ_CP011300.1\|WP_049704144.1\|186402_187041_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|366166
NZ_CP011300.1\|WP_049704138.1\|180360_180648_-\|co-chaperone-GroES	unknown	unknown	gnl\|CDD\|178988
NZ_CP011300.1\|WP_082201845.1\|171359_172523_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|183413
NZ_CP011300.1\|WP_049704133.1\|172519_173236_+\|ATP-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|237438
NZ_CP011300.1\|WP_049704131.1\|169992_171456_+\|histidine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234586

Protein	Function_ID	Function_description	E-value
NZ_CP011300.1\|WP_049704140.1\|181057_181381_-\|hypothetical-protein	gnl\|CDD\|372360	pfam12883, DUF3828, Protein of unknown function (DUF3828). This is a family of bacterial proteins of unknown function.	0.00133024
NZ_CP011300.1\|WP_049704136.1\|177774_178176_-\|HicB-family-protein	gnl\|CDD\|374224	pfam15919, HicB_lk_antitox, HicB_like antitoxin of bacterial toxin-antitoxin system. This is a family of HicB-like antitoxins.	3.08903e-38
NZ_CP011300.1\|WP_049707820.1\|185421_186396_+\|bifunctional-riboflavin-kinase/FAD-synthetase	gnl\|CDD\|235536	PRK05627, PRK05627, bifunctional riboflavin kinase/FAD synthetase.	4.53108e-127
NZ_CP011300.1\|WP_049704134.1\|174735_175482_+\|membrane-protein	gnl\|CDD\|182593	PRK10621, PRK10621, hypothetical protein; Provisional.	1.25733e-68
NZ_CP011300.1\|WP_082202417.1\|181657_183094_-\|sigma-54-dependent-Fis-family-transcriptional-regulator	gnl\|CDD\|225114	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms].	7.13734e-146
NZ_CP011300.1\|WP_053167668.1\|187561_189193_-\|hypothetical-protein	gnl\|CDD\|224108	COG1187, RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis].	7.67454e-80
NZ_CP011300.1\|WP_049707819.1\|177452_177674_+\|DUF2798-domain-containing-protein	gnl\|CDD\|378657	pfam11391, DUF2798, Protein of unknown function (DUF2798). This family of proteins has no known function.	4.64306e-10
NZ_CP011300.1\|WP_049704145.1\|187000_187558_-\|16S-rRNA-(guanine(966)-N(2))-methyltransferase-RsmD	gnl\|CDD\|223813	COG0742, COG0742, N6-adenine-specific methylase [DNA replication, recombination, and repair].	1.05253e-65
NZ_CP011300.1\|WP_049704142.1\|183260_184475_+\|EAL-domain-containing-protein	gnl\|CDD\|376350	pfam00563, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues. The EAL domain is a good candidate for a diguanylate phosphodiesterase function. The domain contains many conserved acidic residues that could participate in metal binding and might form the phosphodiesterase active site.	2.24581e-19
NZ_CP011300.1\|WP_082201848.1\|178180_178381_-\|type-II-toxin-antitoxin-system-HicA-family-toxin	gnl\|CDD\|377942	pfam07927, HicA_toxin, HicA toxin of bacterial toxin-antitoxin,. HicA_toxin is a bacterial family of toxins that act as mRNA interferases. The antitoxin that neutralizes this is family HicB, pfam15919.	6.93765e-21
NZ_CP011300.1\|WP_082201847.1\|175483_176581_-\|hypothetical-protein	gnl\|CDD\|276807	sd00010, SLR, Sel1-like repeat. Sel1-like repeats (SLRs) share similar alpha-helical conformations with Tetratricopeptide repeats (TPRs), but with different consensus sequence lengths and superhelical topologies. SLRs contain 36 to 44 amino acids and are present in bacteria and eukaryotes but not in archaea. SLR proteins are involved in a variety of functions, and many serve as adaptor proteins for the assembly of macromolecular complexes. The SLR family was named after the Caenorhabditis elegans Sel1 protein which is predicted to fold into 11 SLRs, a transmembrane domain, and an N-terminal signal sequence. The human Sel1L protein contains an additional fibronectin type-II domain and an N-terminal PEST sequence. Its downregulation is associated with the development of breast and pancreatic carcinomas.	3.22988e-44
NZ_CP011300.1\|WP_049704143.1\|184492_185359_+\|TIGR01459-family-HAD-type-hydrolase	gnl\|CDD\|319827	cd07525, HAD_like, uncharacterized family of the haloacid dehalogenase-like (HAD) hydrolase superfamily. The haloacid dehalogenase-like (HAD) hydrolases are a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members include 2-L-haloalkanoic acid dehalogenase (C-Cl bond hydrolysis), azetidine hydrolase (C-N bond hydrolysis); phosphonoacetaldehyde hydrolase (C-P bond hydrolysis), phosphoserine phosphatase and phosphomannomutase (CO-P bond hydrolysis), P-type ATPases (PO-P bond hydrolysis) and many others. Members are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	4.18255e-81
NZ_CP011300.1\|WP_082201846.1\|173533_174733_+\|glycosyltransferase-family-2-protein	gnl\|CDD\|133022	cd04179, DPM_DPG-synthase_like, DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the existence of adapter molecules for membrane anchoring. This family also includes bacteria and archaea DPM1_like enzymes. However, the enzyme structure and mechanism of function are not well understood. The UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate. This protein family belongs to Glycosyltransferase 2 superfamily.	2.2569e-45
NZ_CP011300.1\|WP_049704135.1\|176926_177160_-\|hypothetical-protein	gnl\|CDD\|226045	COG3514, COG3514, Uncharacterized protein conserved in bacteria [Function unknown].	7.47862e-14
NZ_CP011300.1\|WP_049704144.1\|186402_187041_-\|alpha/beta-hydrolase	gnl\|CDD\|366166	pfam00561, Abhydrolase_1, alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes.	5.22854e-14
NZ_CP011300.1\|WP_049704138.1\|180360_180648_-\|co-chaperone-GroES	gnl\|CDD\|178988	PRK00364, groES, co-chaperonin GroES; Reviewed.	7.61484e-53
NZ_CP011300.1\|WP_082201845.1\|171359_172523_+\|hypothetical-protein	gnl\|CDD\|183413	PRK12295, hisZ, ATP phosphoribosyltransferase regulatory subunit; Provisional.	2.64726e-86
NZ_CP011300.1\|WP_049704133.1\|172519_173236_+\|ATP-phosphoribosyltransferase	gnl\|CDD\|237438	PRK13583, hisG, ATP phosphoribosyltransferase.	1.49683e-101
NZ_CP011300.1\|WP_049704131.1\|169992_171456_+\|histidine--tRNA-ligase	gnl\|CDD\|234586	PRK00037, hisS, histidyl-tRNA synthetase; Reviewed.	2.62028e-148

>NZ_CP011300.1|WP_082201848.1|178180_178381_-|type-II-toxin-antitoxin-system-HicA-family-toxin
MERNSRRLIALLRQDGWELHAVSGSHHQFKHPSKPGKITVPHPNKDLPTGTVRSVYRQAGWLDETR
>NZ_CP011300.1|WP_049704136.1|177774_178176_-|HicB-family-protein
MRYVAFIHKDPDSVFGVSFPDLPGAISAGDTLDEATRNAVEALALHVRGLEADGDAVPQPRTVDDIVADPSLQQDRADAIIAAIPLVRDLGSTTRINVSLDLGLLKAIDAEARERGQTRSAFIASAVRKELQH
>NZ_CP011300.1|WP_049707819.1|177452_177674_+|DUF2798-domain-containing-protein
MKTLLLAQLIISFLMATIMTGFFSLLALGVSPQWPQAWLHNFVIAWPVAFCLSLVVGKVAFAIAHRVFPPARA
>NZ_CP011300.1|WP_049704135.1|176926_177160_-|hypothetical-protein
MAPPTRRHTSAIDQAEALFKAATTKPVENASPKANAIPVGKETVSLRLDRDVLEHFQDDGPGWQDRINAALRTFLEP
>NZ_CP011300.1|WP_082201847.1|175483_176581_-|hypothetical-protein
MPAATRCGWPIRRSRRHHLSCPCISRRANSSPPRVSCRRSCRHSANERFDFPRSAIASSAWGSIWGIVVFRTGLFLSASALCLLVLSPALAVEKSKDANPSMSVSFPSSGKDKTPSKPQTPPAKAEVSVDDLLDEADKYYDGNGVAQDYDRAFELYSQAAEQGDGYGLDMVGLMYDLGLSVKEDPKTAMEWYRKAADAGFYTAMVNMGTLYEEGRGVQKDYAEAVGWYRKAADQGNLRGQYYMGDMYLDGRGVEKDYEEAVSWYQKAVDGGYADAYWALSLRYVYGQGVAKDTYKAADLAYYALTHGVKAAKDNLRDARNKDVSRNFLRRVQELLAADGYYDGKVDGNFGPQTRDAIDAAFGTAN
>NZ_CP011300.1|WP_049704134.1|174735_175482_+|membrane-protein
MEPLTLLALAGVGLAAGFVDAIAGGGGMLSVPALLSAGLPPVAALATNKMQSIIGTTMAATTYWRKGMVSLRALVPAILLTMAGSLFGALTVKHIDTSALNVAVPIALIAIAGYFMFAPRLTDADRAARLSFPIYVPIVGMVVGFYDGLFGPGTGSFLTLAFVALFGLGVTRAAGNTKVLNLASNFGALLLFIPSGDVVWQVAIVMAIGQIAGGYLGALTGIRFGARLIRPLVVIVSIAMALRLLLVH
>NZ_CP011300.1|WP_082201846.1|173533_174733_+|glycosyltransferase-family-2-protein
MPCLNEAETLAVCIRKARGFLERAGVEGEIVVADNGSSDGSQEIALANGARLVRVETKGYGAALAGGIAAAQGRFVIMGDADDSYDFENLGPFLAKLREGNKLVMGNRFKGGIKDGAMPPLHRYLGNPVLSFVGRLFFGSHIGDFHCGLRGFDRQAILDLNLRTTGMEFASEMVVKATQAKLPIAEVPTTLSPDGRSRRPHLRSFRDGWRHLRFLLLFSPRWLFLYPGLALLLVGIVLGGVLLGGPVHITRTIEIDIHTFLMAAMFIIVGLQAISFALIGRRFASRYGFIPKSNFDGVLEALTLERILLAAVLLIGLGVGTLIWGVSVWASRDFGPLDANSSMRYMILAMTALVSGLQLGMSGFMSSMINIPLYERRVTELPPPDDPMSRRRDLPKKKP
>NZ_CP011300.1|WP_049704133.1|172519_173236_+|ATP-phosphoribosyltransferase
MSGITLAVPSKGRLEEVTRETFARAGLTITRPGGARSYLGALEGVDGVTVRFYPAGEIARELIRGAIDIGVTGIDLIHETAEHGPESVVIAKPLGFGNADVVVAVPDPWIDVTQMHDLSDVASDFRARHGRWLRIATKYVNVTRRHFAAHGIAEYRIVESLGATEAAPAAGVADIIVDITSSGSTLAANQLRILEDGVILKSEAALIVSKTADWDARRLALVGQVLTRLGAEGALAKI
>NZ_CP011300.1|WP_082201845.1|171359_172523_+|hypothetical-protein
MHLQCRNEGGAPGPGQRAAHRPRRRHQGHAGVTTSSERLAALAALVEGEGVTRVAPPLLLPAGPYFDLAGEEFGRRLLLTTGGDGTEFCLRPDFTLPIVTDYLTSEAAGKPAAFGYLGPIFRQRRTGVIEFDQAGLELLAQPDADVALDRVFGFARQTLEIFNVRHAVVRLGGVGLFEALLDGLDMPDVWRPRIRNRFGHAEALERLLTRLATQANGKAETPDRATLIEQVTEQMLAAGLSLTEGRGPEEIADRYLEQQALDAALVPGATLELLRTYLAITGEAEEALAAVEALAERAGIDLSARLGTLRRHLNAFGPAAPVTFDAAFSPRLDYYTGVVFEMTGQGGHVLASGGQYDRLLERLGATSRIAASGCAVWVDRLEREALA
>NZ_CP011300.1|WP_049704131.1|169992_171456_+|histidine--tRNA-ligase
MTDKSKLIVPRLPRGFEDRTPADIAATDAMIARIKAVYQRYGFDPVETPLFEYTETLGKFLPDTDRPNAGVFSLQDDDEQWMSLRYDLTAPLARYFAENYDRLPKPFRSYRAGYVFRNEKPGPGRFRQFMQFDADTVGAAGPESDAEMCMMMADTMDALGLAGKYVVKVNNRKVLDGVLESIGLGKADPDKSLIVLRAIDKLDRLGPDGVRALLGKGREDESGDFTKGAGLDDEQISRVLAYTSAEGEGDPLFTDLIKLVSENATGLAGVEELRAMAALFASAGYGPDRIKIDPSVVRGLEYYTGPVFEIELTFAVTNEKGQKVVFGSVGGGGRYDGLVSRFRAEPVPATGFSIGVSRLANALKLTGNLQSEAVRGPVVVLVMDRDQTARYQAMVSELRNAGIRAEMYLGSSGMNAQMKYANRRNAPAVVIEGSNERAEGMVTIKDMVAGAEAAKEFTSNAEMKAARPAQVNVPRTGLVDAIKDMLA
>NZ_CP011300.1|WP_049704138.1|180360_180648_-|co-chaperone-GroES
MSFRPLHDRVVVRRVDSEEKTAGGIIIPDTAKEKPSEGIIESVGPGARDESGKIVALDVKAGDRVLFGKWSGTEVKIDGKDLLIMKESDILGIIG
>NZ_CP011300.1|WP_049704139.1|180831_181017_+|hypothetical-protein
MSEQAKNSDIRLRRTGGAGLNTQWKWEIVDAEGKVLKSGTALGEEHKAFATAKKAKERLAK
>NZ_CP011300.1|WP_049704140.1|181057_181381_-|hypothetical-protein
MVANLQANAVDGKGTRIDPAAPDFGAFNPFINGETGTLENLAVSEPVIQDGTAVAMVSFTNASKPTVLTISMVQDEGAWKIDDVASVGAGEKWLYSWLLQYDPFGQQ
>NZ_CP011300.1|WP_082202417.1|181657_183094_-|sigma-54-dependent-Fis-family-transcriptional-regulator
MRPGRRSDAAATILLIDRDPAAGRAMAANLAGCLLAEPVIEECRNGRAAAEKLRGRDYDIVLMDLSSLDDLAPTTEEAVARLAKIAEGALLIALSGGASVSAAVAAMRAGAHDFVAKPISGTGFAARIGELAHRHGKARALTIDARPGAITADFAGFVGASTQMQYVYEQIGRIAPSSAPVFITGESGTGKEVCAEALHSKGPRAERRFVAVNCAAIPRDLMETELFGAARGAYTGSVEDRKGAAELADGGTLFLDEIGEMDLSLQSKLLRFLQTGALTRVGEADTRQVDVRVICATNRNPMQMITEKRFREDLFYRLHVLPIHLPPLRQRPADIMVLGQHFLARFAREEHKRFSGFSPEAADSLIAREWPGNVRQLQNLVRRLVVMFDGGEISAEMVSAADIESRSYSPTPIAEPAPAPRRTTVLPMWQQEQRIIEDAILSFGGNIALAAAALELSPSTIYRKRQAWAEMAGAKGAA
>NZ_CP011300.1|WP_049704142.1|183260_184475_+|EAL-domain-containing-protein
MQALVYTFIALAAFAVAATAYFGLAFSPVEALMLALLLGGLAVIYMERTLRRRSEARLERAIEELSRLLATDAQAGQVLSQRINALSDIDAGKRLSGLEADISVLGTVVRQVAEAVADIEQAQDDVREAKKGPMVLSATARSVPEALPEPEIDLSEVEDALDDGKIIFHIEPIFTLPQRRVHGYDLTPRMRLDGGDLAAASEFMPVRGGERIVRRIELMALEEAVVLSQRARGNKVTLNLYAPLSRATLGDAASVNQLAALLETNRAAATVINFAISEDDWRAATGAERQAMSSMVRRGAAFSIVNARSLRSDFSELSSLGVKSVRVDASRFIDQPEAFTDIHTSDIASFLERSGIDLMAVGIRSEDQIITLLEDGFRFAQGHYMAAAGPIRPDLVGDRLAPVA
>NZ_CP011300.1|WP_049704143.1|184492_185359_+|TIGR01459-family-HAD-type-hydrolase
MSDTAGALSGLSAVSGRYDVVLSDVWGVVHNGVAAYPSAVEALLRFREGGGRVVLITNAPRPSAPIIEMLDHLGVPRAAYDAVVTSGDATRTMIARYSGKVIHHVGPPTADDALYEGLDVRRGSAEEADAVVVTDLDTDDDTPDMYAERISQWLRRGLPLICANPDKVVEIGEQIVYCGGALADIYEELGGQVMMAGKPYVPIYREALALAEKALGRPVDKARMLAIGDSVRTDAMGAADFGIDLLFITGSIHAGELDAFGQPDPQRIADLVATTGANMAGFMARLGW
>NZ_CP011300.1|WP_049707820.1|185421_186396_+|bifunctional-riboflavin-kinase/FAD-synthetase
MTDFIKLAGLDNVPARLKGAQIAIGNFDGFHRGHQHVFATLKARARLRGVPAVVLTFEPHPRDVFAPEPFMFRLTEGAAKARLAEALGLDGIVIMPFTRQLSQVEPEDFVTRYLIEGLGVSGVIVGADFHFGRERRGTPDFLRQAGAANGFEVETLDLIDDGAEPISSSRVRAALREGDLATANTLLGYHWFVEGEVVSGDRRGRELGFPTANMATHEGFHLAQGVYAVRARLGDRLIDGVASFGKPMFNNQRPPFETHLFDFHDDIYGAHLSVALIGHIRGQEVFKGLDDLIAAMNRDSRRAEDALRACGPMSELDKKLGFFG
>NZ_CP011300.1|WP_049704144.1|186402_187041_-|alpha/beta-hydrolase
MARVPCTSSPSPAKVDPTFFLPGAGGSAAFWGPVANHMHLDGRFLAWPGLGDEPSRPDVEGIDDLVAMVLDALDAPSNIVAQSMGGLVAVKVALAAPEKVRRLVLAATSGGVPVADLGGGDWRADYYAAYPHAARWIGEAREDLSARLGDIACPTLLLWGDRDPISPVAVGERLLALLPDARLHVIAGGDHDLAITHAQTVAGLITRHFEEN
>NZ_CP011300.1|WP_049704145.1|187000_187558_-|16S-rRNA-(guanine(966)-N(2))-methyltransferase-RsmD
MRIVAGKFRGKQLLSPPDDSIRPTSDRARESIFNILASRLGPHLDGVRVIDLFAGTGALGLEALSRGAAHVIFVDTGADARGLIRDHIEAFGAGGVTKLLRRDATDLGPAGTMGGIGLAFLDPPYGKGLGEKALVELREGKWLAPGATVVLEEASEATVDIPEGFALQDRREYGTGAMHILTFAG
>NZ_CP011300.1|WP_053167668.1|187561_189193_-|hypothetical-protein
MSESRSAPTTGDRLAKVMARSGLCSRRDAELWIAAGRVSVNGKVVKTPAFNVTERDKIAVDGKPLAARQGTRVWLYHKPPGLVVTEKDPEGRPTIFEALNELGLPRVLTVGRLDINTEGLLLLTNDGGLKRVLELPATGWLRRYRVRAHGSITQAALDKLEDGIEVDGVKYGPIEATLEREQGHNVWLVLALREGKNREVKNVLGALGLEVNRLIRVSYGPFQLGDLAVGAVETVKDRVLQDQLGERLASEANADFISELPEPRRAPDRPGRDFGKPARGGRAAPAGRPGRFRDEEGPTRKIHFDDGRAPAEYKAKPQGRKKPEFRSEDDKPARSYGKREERPAREERDFDKKPRGKAAGDKPFRSRGEKPLSDRPRRSHSDRPDAREAGEWTRKPRAPRSAAGFDDRSAAPKRSYASKPHGAEGGKPRSRSADASPRPARRDGAGPARGPRPEGAGRPAGRGPRPEGGAPRSSTRSPRGEGAPARGPRSDAPPRGKGGPRGARPEGAPKGRGGPRKDGGPSSGPRTPRPGGGAPRGPRKPRG

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

154277 : 162822

EBPR_siphovirus(42.86%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_049704109.1\|154277_155393_-	site-specific DNA-methyltransferase	A0A2K9VGT2	Pontimonas_phage	8.0e-81	41.9
WP_049704110.1\|155389_155686_-	hypothetical protein	NA	NA	NA	NA
WP_049704111.1\|156152_156632_-	hypothetical protein	NA	NA	NA	NA
WP_049704112.1\|156691_156889_-	hypothetical protein	NA	NA	NA	NA
WP_049704113.1\|156885_157092_-	hypothetical protein	NA	NA	NA	NA
WP_049704114.1\|157088_157349_-	DUF2312 domain-containing protein	Q8W6H2	Sinorhizobium_phage	2.1e-21	64.5
WP_082201838.1\|157341_157824_-	hypothetical protein	NA	NA	NA	NA
WP_049704116.1\|157657_158323_-	DUF2815 domain-containing protein	F8TV55	EBPR_siphovirus	7.7e-39	43.1
WP_082201839.1\|158336_159626_-	DUF2800 domain-containing protein	F8TV53	EBPR_siphovirus	8.6e-79	43.7
WP_082201840.1\|159655_159910_+	hypothetical protein	NA	NA	NA	NA
WP_049704118.1\|159930_160641_-	hypothetical protein	NA	NA	NA	NA
WP_082201841.1\|160643_162020_-	hypothetical protein	F8TV49	EBPR_siphovirus	2.7e-107	50.3
WP_049704120.1\|162079_162406_-	DUF4406 domain-containing protein	W6E9N4	Rhizobium_phage	8.6e-28	64.9
WP_049704121.1\|162402_162822_-	RusA family crossover junction endodeoxyribonuclease	A0A1B1IWV6	uncultured_Mediterranean_phage	7.0e-22	43.8

DBSCAN-SWA_2

511358 : 554656

Rhodobacter_phage(11.76%)

portal,protease,tail,head,capsid

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_049704407.1\|511358_511664_+\|protease	Clp protease ClpS	NA	NA	NA	NA
WP_049704408.1\|511666_512119_-	N-acetyltransferase	NA	NA	NA	NA
WP_049704409.1\|512120_512648_-	response regulator	NA	NA	NA	NA
WP_049704410.1\|512952_513555_-	superoxide dismutase	Q56AR7	Bacillus_thuringiensis_phage	6.7e-42	44.6
WP_049704411.1\|513645_515736_-	S9 family peptidase	NA	NA	NA	NA
WP_082202424.1\|515809_516214_-	peptide-methionine (R)-S-oxide reductase	NA	NA	NA	NA
WP_082202425.1\|516439_518776_+	Na(+)/H(+) antiporter subunit A	NA	NA	NA	NA
WP_049704413.1\|518772_519192_+	monovalent cation/H+ antiporter subunit B	NA	NA	NA	NA
WP_049707871.1\|519191_519569_+	monovalent cation/H+ antiporter subunit C	NA	NA	NA	NA
WP_049704414.1\|519570_521145_+	hypothetical protein	NA	NA	NA	NA
WP_049704415.1\|521141_521621_+	Na+/H+ antiporter subunit E	NA	NA	NA	NA
WP_049704416.1\|521617_521938_+	cation:proton antiporter	NA	NA	NA	NA
WP_049704417.1\|521934_522282_+	Na+/H+ antiporter subunit G	NA	NA	NA	NA
WP_049704418.1\|522414_522843_+	MucR family transcriptional regulator	A0A1P8VVG0	Erythrobacter_phage	5.8e-24	47.7
WP_053167725.1\|523040_523487_+	hypothetical protein	NA	NA	NA	NA
WP_053167728.1\|523476_524244_+	hypothetical protein	NA	NA	NA	NA
WP_049704419.1\|524240_524654_-	cysteine desulfuration protein SufE	NA	NA	NA	NA
WP_049704420.1\|524812_525172_-	hypothetical protein	NA	NA	NA	NA
WP_082201890.1\|525396_527205_+	hypothetical protein	Q8QKV7	Ectocarpus_siliculosus_virus	7.7e-25	34.2
WP_082201891.1\|527171_528470_+	hypothetical protein	NA	NA	NA	NA
WP_049704423.1\|528479_528830_+	DUF1491 domain-containing protein	NA	NA	NA	NA
WP_049704424.1\|528837_529710_-	alpha/beta hydrolase	A0A1J0GNR5	Mycobacterium_phage	1.3e-06	32.4
WP_049704425.1\|529837_530668_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_049704426.1\|530672_531239_-	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA
WP_049704427.1\|531303_532440_-	DUF2336 domain-containing protein	NA	NA	NA	NA
WP_049704428.1\|532850_533591_+	hypothetical protein	NA	NA	NA	NA
WP_049704429.1\|533596_533869_-	hypothetical protein	NA	NA	NA	NA
WP_082201894.1\|534039_534477_+	DUF2147 domain-containing protein	NA	NA	NA	NA
WP_049704431.1\|534638_534851_-	KTSC domain-containing protein	NA	NA	NA	NA
WP_049704432.1\|534920_535340_+	hypothetical protein	NA	NA	NA	NA
WP_049707874.1\|535398_536634_+	ATP-binding protein	A0A0U4IJ26	Arthrobacter_phage	5.2e-65	38.4
WP_049704433.1\|537707_538073_-	glyoxalase	NA	NA	NA	NA
WP_049704434.1\|538127_539282_+\|portal	phage portal protein	W8ECU7	Geobacillus_phage	4.8e-65	38.2
WP_049704435.1\|539630_539822_+	hypothetical protein	NA	NA	NA	NA
WP_082202426.1\|539955_540438_+\|head,protease	HK97 family phage prohead protease	A0A0U2BX10	Paracoccus_phage	1.6e-30	47.6
WP_049704436.1\|540451_541672_+\|capsid	phage major capsid protein	Q3HQT0	Burkholderia_phage	5.5e-83	42.8
WP_049704437.1\|541813_542380_+	hypothetical protein	H9YSG3	environmental_Halophage	9.2e-09	28.8
WP_049704438.1\|542376_542718_+\|head,tail	head-tail adaptor protein	A0A1W6JP44	Morganella_phage	1.2e-08	34.0
WP_049704439.1\|542848_543259_+	DUF3168 domain-containing protein	NA	NA	NA	NA
WP_049704440.1\|543268_543682_+\|tail	phage major tail protein, TP901-1 family	NA	NA	NA	NA
WP_082201896.1\|543678_543972_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_049704441.1\|543968_544250_-	ribbon-helix-helix protein, CopG family	NA	NA	NA	NA
WP_049704442.1\|544313_544631_+	gene transfer agent family protein	NA	NA	NA	NA
WP_049704443.1\|544627_544822_+\|tail	phage tail assembly chaperone	NA	NA	NA	NA
WP_082202427.1\|544830_545370_+	hypothetical protein	K7YBG2	uncultured_Mediterranean_phage	4.8e-07	31.1
WP_049704444.1\|545523_546141_+	TIGR02217 family protein	A0A0K1LLZ8	Rhodobacter_phage	8.1e-51	50.7
WP_049704445.1\|546137_547028_+	hypothetical protein	A0A0K0PVK1	Roseobacter_phage	7.1e-56	41.1
WP_049704446.1\|547024_547441_+	hypothetical protein	F4YXU4	Roseobacter_phage	7.2e-27	47.5
WP_049704447.1\|547654_551413_+	hypothetical protein	A0A0K1LL82	Rhodobacter_phage	1.7e-199	38.0
WP_053167734.1\|551405_552182_+	hypothetical protein	A0A088F6V6	Sulfitobacter_phage	1.1e-36	40.5
WP_049704448.1\|552337_552604_+	hypothetical protein	NA	NA	NA	NA
WP_049704449.1\|552634_553291_+	DNA-binding response regulator	NA	NA	NA	NA
WP_049704450.1\|553294_554656_+	sensor histidine kinase	W8CYF6	Bacillus_phage	2.1e-06	21.2

DBSCAN-SWA_3

1391523 : 1401497

Streptococcus_phage(28.57%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_049707971.1\|1391523_1393353_+	heavy metal translocating P-type ATPase	E4ZFI9	Streptococcus_phage	2.2e-59	28.5
WP_049705108.1\|1393353_1394127_-	3-oxoacyl-ACP reductase	A0A2P0VP75	Tetraselmis_virus	7.6e-06	24.8
WP_049705109.1\|1394243_1395077_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_049705110.1\|1395078_1395855_-	TatD family deoxyribonuclease	NA	NA	NA	NA
WP_049705111.1\|1395857_1397408_-\|tRNA	methionine--tRNA ligase	A0A1V0SHR2	Klosneuvirus	1.8e-99	37.6
WP_049705112.1\|1397404_1398451_-	ATP-binding protein	M1NSC1	Streptococcus_phage	2.7e-06	31.7
WP_049705113.1\|1398447_1399134_-	dTMP kinase	Q2Z0N0	Pseudomonas_phage	1.1e-21	32.5
WP_053167847.1\|1399145_1400297_-	D-alanyl-D-alanine carboxypeptidase	B6DZZ7	Stx2-converting_phage	1.3e-57	39.4
WP_082202444.1\|1400363_1401497_-	septal ring lytic transglycosylase RlpA family protein	F5B3X9	Synechococcus_phage	3.0e-19	53.6

DBSCAN-SWA_4

1536635 : 1542471

uncultured_Mediterranean_phage(85.71%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_049705228.1\|1536635_1537964_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	1.6e-99	47.2
WP_049705229.1\|1538035_1538863_-	twin-arginine translocase subunit TatC	A0A1B1IVR7	uncultured_Mediterranean_phage	1.4e-45	44.1
WP_049705230.1\|1538866_1539598_-	twin-arginine translocase subunit TatB	A0A1B1IVT0	uncultured_Mediterranean_phage	6.1e-05	42.6
WP_049705231.1\|1539639_1539855_-	twin-arginine translocase TatA/TatE family subunit	A0A1B1IVR9	uncultured_Mediterranean_phage	3.2e-07	53.8
WP_049705232.1\|1539905_1541015_-	ABC transporter ATP-binding protein	Q6GZ03	Mycoplasma_phage	6.6e-11	42.7
WP_049705233.1\|1541011_1541680_-	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	7.0e-40	47.2
WP_049705234.1\|1541676_1542471_-	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	2.3e-34	34.6

DBSCAN-SWA_5

1643243 : 1669364

Rhizobium_phage(16.67%)

portal,tail,head,capsid,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_049705313.1\|1643243_1643633_-	gene transfer agent family protein	B4UTQ4	Rhizobium_phage	4.4e-10	44.4
WP_049705314.1\|1643629_1644076_-	hypothetical protein	NA	NA	NA	NA
WP_049705315.1\|1644121_1644553_-	DUF3168 domain-containing protein	NA	NA	NA	NA
WP_049705316.1\|1644685_1645141_-	HK97 family phage protein	A0A141GEW6	Brucella_phage	8.7e-26	47.7
WP_049705317.1\|1645137_1645521_-\|head,tail	head-tail adaptor protein	NA	NA	NA	NA
WP_049705318.1\|1645916_1646264_-	hypothetical protein	NA	NA	NA	NA
WP_049705319.1\|1646263_1647433_-	hypothetical protein	F8TVA1	EBPR_siphovirus	3.8e-41	51.5
WP_049705320.1\|1647434_1648829_-\|portal	phage portal protein	F8TVA0	EBPR_siphovirus	3.7e-144	62.5
WP_049705321.1\|1648825_1649728_-	hypothetical protein	A0A160DEZ7	Gordonia_phage	3.3e-16	29.9
WP_049705322.1\|1649727_1650036_-	hypothetical protein	NA	NA	NA	NA
WP_049705323.1\|1650108_1652088_-\|capsid	phage major capsid protein	S4TNE3	Salmonella_phage	7.1e-149	47.8
WP_049705324.1\|1652106_1653903_-\|terminase	terminase large subunit	Q3HQS7	Burkholderia_phage	4.0e-159	49.9
WP_049705325.1\|1653899_1654322_-	hypothetical protein	NA	NA	NA	NA
WP_082202120.1\|1654417_1655140_-	HNH endonuclease	A0A068F8W5	Mycobacterium_phage	2.9e-07	45.7
WP_049705327.1\|1655212_1655578_-	HNH endonuclease	A0A286N2R3	Klebsiella_phage	1.2e-06	40.3
WP_049705328.1\|1655717_1656086_-	hypothetical protein	NA	NA	NA	NA
WP_049705329.1\|1656216_1656729_-	hypothetical protein	NA	NA	NA	NA
WP_049705330.1\|1656725_1657034_-	hypothetical protein	NA	NA	NA	NA
WP_082202121.1\|1657108_1659499_-	hypothetical protein	A0A2H4JFA4	uncultured_Caudovirales_phage	1.6e-14	23.4
WP_049705332.1\|1659441_1660215_-	hypothetical protein	Q5QF32	Pseudomonas_virus	1.4e-31	40.0
WP_049705333.1\|1660211_1660706_-	adenine methyltransferase	M4QBY4	Dunaliella_viridis_virus	1.3e-38	51.2
WP_049705334.1\|1660706_1661030_-	hypothetical protein	NA	NA	NA	NA
WP_049705335.1\|1661026_1661404_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_049705336.1\|1661400_1661871_-	hypothetical protein	A0A1V0EEZ0	Caulobacter_phage	6.4e-08	30.6
WP_049705337.1\|1661863_1662505_-	hypothetical protein	A0A076GD02	Sinorhizobium_phage	6.7e-48	51.2
WP_049705338.1\|1662501_1663815_-	hypothetical protein	NA	NA	NA	NA
WP_049705339.1\|1663811_1665710_-	DNA cytosine methyltransferase	A0A068CDI9	Rhizobium_phage	2.1e-227	60.0
WP_049705340.1\|1665709_1666204_-	single-stranded DNA-binding protein	R9TP78	Rhizobium_phage	5.0e-51	60.7
WP_049705341.1\|1666205_1666760_-	hypothetical protein	NA	NA	NA	NA
WP_049705342.1\|1666762_1667212_-	hypothetical protein	NA	NA	NA	NA
WP_049705343.1\|1667216_1667561_-	hypothetical protein	NA	NA	NA	NA
WP_049705344.1\|1667614_1668058_-	hypothetical protein	NA	NA	NA	NA
WP_049705345.1\|1668196_1668439_-	hypothetical protein	A0A291AUJ6	Sinorhizobium_phage	5.8e-13	52.6
WP_053167881.1\|1668530_1669364_+	helix-turn-helix domain-containing protein	A0A291AUK0	Sinorhizobium_phage	2.6e-60	42.8

DBSCAN-SWA_6

3123284 : 3131872

Rhizobium_phage(50.0%)

portal,protease,head,capsid,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_049706612.1\|3123284_3124472_-	hypothetical protein	A0A2I2L6T3	Escherichia_phage	2.0e-05	36.5
WP_049706613.1\|3124542_3125037_-	hypothetical protein	NA	NA	NA	NA
WP_049706614.1\|3125038_3125635_-	hypothetical protein	F8TVA4	EBPR_siphovirus	1.2e-11	37.5
WP_049706615.1\|3125634_3125976_-	hypothetical protein	NA	NA	NA	NA
WP_049706616.1\|3125957_3126575_-	hypothetical protein	NA	NA	NA	NA
WP_049706617.1\|3126574_3126931_-	hypothetical protein	NA	NA	NA	NA
WP_049706618.1\|3126998_3128267_-\|capsid	phage major capsid protein	B4UTP3	Rhizobium_phage	6.0e-109	52.5
WP_082202254.1\|3128368_3128980_-\|head,protease	HK97 family phage prohead protease	B4UTP2	Rhizobium_phage	8.9e-42	55.2
WP_049706620.1\|3128948_3130220_-\|portal	phage portal protein	B4UTP1	Rhizobium_phage	2.0e-120	57.8
WP_082202486.1\|3130216_3131872_-\|terminase	terminase large subunit	A0A2K5B285	Erysipelothrix_phage	1.4e-78	32.5

DBSCAN-SWA_7

4017744 : 4067934

Aurantimonas_phage(37.5%)

tRNA,portal,tail,head,capsid,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_082202348.1\|4017744_4018923_-\|tRNA	tRNA epoxyqueuosine(34) reductase QueG	NA	NA	NA	NA
WP_082202349.1\|4018903_4019611_-	glutathione S-transferase family protein	NA	NA	NA	NA
WP_049707317.1\|4019722_4020535_+	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA
WP_049707318.1\|4020559_4021519_-	complex I NDUFA9 subunit family protein	NA	NA	NA	NA
WP_049708257.1\|4021698_4022052_+	GFA family protein	NA	NA	NA	NA
WP_049707319.1\|4022348_4023740_+	hypothetical protein	NA	NA	NA	NA
WP_049707320.1\|4023797_4024700_-	hypothetical protein	NA	NA	NA	NA
WP_082202350.1\|4024938_4025493_-	hypothetical protein	NA	NA	NA	NA
WP_049707321.1\|4025505_4026720_-	abortive infection protein	NA	NA	NA	NA
WP_049707322.1\|4026813_4027026_-	hypothetical protein	NA	NA	NA	NA
WP_049707323.1\|4027022_4027826_-	hypothetical protein	NA	NA	NA	NA
WP_049707324.1\|4027819_4028017_-	hypothetical protein	NA	NA	NA	NA
WP_049707325.1\|4028016_4028358_-	hypothetical protein	NA	NA	NA	NA
WP_049707326.1\|4028502_4028847_-	transcriptional regulator	NA	NA	NA	NA
WP_082202351.1\|4028942_4029158_+	hypothetical protein	NA	NA	NA	NA
WP_049707327.1\|4029351_4029783_-	hypothetical protein	NA	NA	NA	NA
WP_049707328.1\|4029842_4030139_-	hypothetical protein	NA	NA	NA	NA
WP_049707329.1\|4030237_4030726_+	hypothetical protein	NA	NA	NA	NA
WP_049707330.1\|4030725_4031004_+	hypothetical protein	NA	NA	NA	NA
WP_049707331.1\|4031021_4031342_-	hypothetical protein	NA	NA	NA	NA
WP_082202512.1\|4032055_4032988_+	hypothetical protein	A0A0M3LPV8	Mannheimia_phage	2.0e-24	36.0
WP_049707332.1\|4032984_4033317_+	hypothetical protein	NA	NA	NA	NA
WP_053168139.1\|4033313_4034408_+	phage Gp37/Gp68 family protein	R9TNA8	Rhizobium_phage	1.4e-74	46.2
WP_049707333.1\|4034404_4034734_+	hypothetical protein	NA	NA	NA	NA
WP_049707334.1\|4034740_4035610_+	DUF2303 domain-containing protein	I6NVL7	Burkholderia_virus	9.4e-13	30.3
WP_049707335.1\|4035690_4036080_+	ASCH domain-containing protein	A0A291AUQ6	Sinorhizobium_phage	7.1e-45	64.8
WP_049707336.1\|4036079_4036313_+	hypothetical protein	NA	NA	NA	NA
WP_049707337.1\|4036312_4038316_+	DNA cytosine methyltransferase	A0A068CDI9	Rhizobium_phage	1.4e-248	58.6
WP_049707338.1\|4038312_4038528_+	hypothetical protein	NA	NA	NA	NA
WP_049707339.1\|4038524_4038761_+	hypothetical protein	NA	NA	NA	NA
WP_049707340.1\|4038772_4039702_-	hypothetical protein	NA	NA	NA	NA
WP_049707341.1\|4039774_4040206_-	type II toxin-antitoxin system HicB family antitoxin	A0A0R6PH90	Moraxella_phage	2.1e-13	35.5
WP_049707342.1\|4040251_4040446_-	hypothetical protein	NA	NA	NA	NA
WP_082202352.1\|4040535_4041510_+	hypothetical protein	NA	NA	NA	NA
WP_049707345.1\|4041593_4042391_+	hypothetical protein	NA	NA	NA	NA
WP_049707346.1\|4042683_4043256_+	hypothetical protein	A0A0A8IL87	Aurantimonas_phage	8.9e-20	40.5
WP_049707347.1\|4043409_4044045_+	hypothetical protein	NA	NA	NA	NA
WP_049707348.1\|4044041_4046015_+\|terminase	terminase	A0A291AUK9	Sinorhizobium_phage	2.0e-183	49.8
WP_053168144.1\|4046011_4047625_+\|portal	phage portal protein	A0A068CC70	Rhizobium_phage	1.1e-171	57.9
WP_049707349.1\|4047617_4047893_+	hypothetical protein	A0A068CH50	Rhizobium_phage	1.7e-05	34.1
WP_049707350.1\|4047892_4048807_+	hypothetical protein	A0A068CE01	Rhizobium_phage	6.7e-102	63.5
WP_049707351.1\|4048810_4049398_+	hypothetical protein	NA	NA	NA	NA
WP_049707352.1\|4049399_4049780_+\|head	head decoration protein	NA	NA	NA	NA
WP_049707353.1\|4049793_4050804_+\|capsid	minor capsid protein E	Q9JMM2	Wolbachia_phage	4.3e-49	38.0
WP_049707354.1\|4050912_4051446_+	hypothetical protein	NA	NA	NA	NA
WP_049707355.1\|4051448_4051805_+	hypothetical protein	NA	NA	NA	NA
WP_049707356.1\|4051809_4052622_+	hypothetical protein	A0A0A8IKZ7	Aurantimonas_phage	2.5e-44	40.6
WP_053168147.1\|4052618_4053167_+	hypothetical protein	A0A0A8IL55	Aurantimonas_phage	1.3e-31	50.0
WP_049707357.1\|4053380_4053773_+	GPW / gp25 family protein	A0A0A8IN57	Aurantimonas_phage	1.1e-32	56.5
WP_049707358.1\|4053776_4054637_+	hypothetical protein	A0A219VH98	Ochrobactrum_phage	3.0e-43	36.8
WP_049707359.1\|4054639_4055755_+	hypothetical protein	K4I1F8	Acidithiobacillus_phage	1.3e-22	37.7
WP_049707360.1\|4055754_4058976_+	DUF4815 domain-containing protein	K4ICQ5	Acidithiobacillus_phage	8.5e-160	36.4
WP_049707361.1\|4058990_4060577_+	hypothetical protein	NA	NA	NA	NA
WP_049707362.1\|4060573_4060909_+	hypothetical protein	NA	NA	NA	NA
WP_049707363.1\|4061008_4062238_+\|tail	tail sheath protein	A0A0A8IL59	Aurantimonas_phage	3.6e-135	61.5
WP_049707364.1\|4062291_4062810_+	bacteriophage protein	A0A0A8ILB8	Aurantimonas_phage	2.8e-52	57.5
WP_049707365.1\|4062810_4063125_+\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_049707366.1\|4063323_4063710_-	hypothetical protein	NA	NA	NA	NA
WP_049707367.1\|4063890_4066185_+\|tail	phage tail tape measure protein	A0A193GYN8	Enterobacter_phage	3.9e-58	31.1
WP_049707368.1\|4066190_4066643_+\|tail	tail protein	A0A0A8IL04	Aurantimonas_phage	5.6e-33	46.0
WP_049707369.1\|4066645_4066876_+	hypothetical protein	A0A0A8IL62	Aurantimonas_phage	4.5e-07	44.7
WP_049707370.1\|4066875_4067934_+	late control D family protein	A0A0A8ILC1	Aurantimonas_phage	1.1e-74	45.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP011300

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection