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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP009762 Staphylococcus schleiferi strain 2142-05 chromosome, complete genome 1 crisprs WYL,DEDDh,cas3,DinG,cas2,cas1,cas9,csa3 0 4 6 0

Results visualization

1. NZ_CP009762
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009762_1 1478868-1479233 TypeII NA
5 spacers
cas2,cas1,cas9

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP009762_1 1.4|1479102|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR 1479102-1479131 30 KY653117 Staphylococcus phage IME1323_01, complete genome 7273-7302 1 0.967
NZ_CP009762_1 1.4|1479102|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR 1479102-1479131 30 MF417907 Uncultured Caudovirales phage clone 7F_7, partial genome 39220-39249 2 0.933
NZ_CP009762_1 1.4|1479102|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR 1479102-1479131 30 KY653129 Staphylococcus phage IME1365_01, complete genome 3762-3791 2 0.933
NZ_CP009762_1 1.4|1479102|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR 1479102-1479131 30 MT423824 Staphylococcus virus pSp_SNUABM-S, complete genome 12268-12297 2 0.933
NZ_CP009762_1 1.4|1479102|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR 1479102-1479131 30 MT423823 Staphylococcus virus pSp_SNUABM-J, complete genome 12846-12875 2 0.933
NZ_CP009762_1 1.5|1479168|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR 1479168-1479197 30 MG770897 Staphylococcus phage SH-St 15644, complete genome 38125-38154 4 0.867
NZ_CP009762_1 1.5|1479168|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR 1479168-1479197 30 AF424783 Staphylococcus aureus phage phi 13, complete genome 14445-14474 4 0.867
NZ_CP009762_1 1.5|1479168|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR 1479168-1479197 30 MG029513 Staphylococcus phage phiSa2wa_st72, complete genome 13661-13690 4 0.867
NZ_CP009762_1 1.5|1479168|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR 1479168-1479197 30 NC_004617 Staphylococcus prophage phi 13, complete genome 14445-14474 4 0.867
NZ_CP009762_1 1.5|1479168|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR 1479168-1479197 30 KY056620 Staphylococcus phage P240, complete genome 38491-38520 4 0.867
NZ_CP009762_1 1.5|1479168|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR 1479168-1479197 30 NC_014460 Staphylococcus phage SAP-26, complete genome 38300-38329 4 0.867
NZ_CP009762_1 1.5|1479168|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR 1479168-1479197 30 MK801681 Staphylococcus phage SAP11, complete genome 28207-28236 4 0.867
NZ_CP009762_1 1.5|1479168|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR 1479168-1479197 30 KY653125 Staphylococcus phage IME1346_01, complete genome 14463-14492 4 0.867
NZ_CP009762_1 1.5|1479168|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR 1479168-1479197 30 NC_021773 Staphylococcus phage JS01, complete genome 25206-25235 4 0.867
NZ_CP009762_1 1.5|1479168|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR 1479168-1479197 30 MH401414 Staphylococcus aureus phage SA45ruMSSAST97, complete genome 25204-25233 4 0.867
NZ_CP009762_1 1.5|1479168|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR 1479168-1479197 30 MK940809 Staphylococcus phage Sa2wa_st8, complete genome 12364-12393 4 0.867
NZ_CP009762_1 1.5|1479168|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR 1479168-1479197 30 KF831354 Staphylococcus phage phiBU01, complete genome 28108-28137 4 0.867
NZ_CP009762_1 1.5|1479168|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR 1479168-1479197 30 DQ530360 Staphylococcus aureus phage phiNM2, complete genome 14948-14977 4 0.867
NZ_CP009762_1 1.5|1479168|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR 1479168-1479197 30 MH401415 Staphylococcus aureus phage SA537ruMSSAST97, complete genome 25206-25235 4 0.867
NZ_CP009762_1 1.5|1479168|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR 1479168-1479197 30 JQ779023 Staphylococcus phage SMSAP5, complete genome 7455-7484 4 0.867
NZ_CP009762_1 1.5|1479168|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR 1479168-1479197 30 MH321492 Staphylococcusphage Lorac, complete genome 41515-41544 4 0.867
NZ_CP009762_1 1.5|1479168|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR 1479168-1479197 30 NC_008583 Staphylococcus aureus phage phiNM1, complete genome 14953-14982 4 0.867
NZ_CP009762_1 1.5|1479168|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR 1479168-1479197 30 MT013111 Staphylococcus phage SA75, complete genome 41435-41464 4 0.867
NZ_CP009762_1 1.5|1479168|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR 1479168-1479197 30 KF598856 Staphylococcus phage YMC/09/04/R1988, complete genome 37772-37801 4 0.867
NZ_CP009762_1 1.5|1479168|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR 1479168-1479197 30 DQ530362 Staphylococcus aureus phage phiNM4, complete genome 14856-14885 4 0.867
NZ_CP009762_1 1.5|1479168|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR 1479168-1479197 30 NC_048635 Staphylococcus phage P630, complete genome 38444-38473 4 0.867
NZ_CP009762_1 1.5|1479168|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR 1479168-1479197 30 NC_048713 Staphylococcus aureus phage SA345ruMSSAST8, complete genome 16425-16454 4 0.867
NZ_CP009762_1 1.5|1479168|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR 1479168-1479197 30 MG029517 Staphylococcus phage phiSa2wa_st93, complete genome 12364-12393 4 0.867
NZ_CP009762_1 1.5|1479168|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR 1479168-1479197 30 MH384260 Staphylococcus phage SA780ruMSSAST101, complete genome 15321-15350 4 0.867
NZ_CP009762_1 1.5|1479168|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR 1479168-1479197 30 MG029516 Staphylococcus phage phiSa2wa_st93mssa, complete genome 12364-12393 4 0.867
NZ_CP009762_1 1.5|1479168|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR 1479168-1479197 30 KP209285 UNVERIFIED: Staphylococcus phage PhiNM4-gamma4, complete genome 12082-12111 4 0.867
NZ_CP009762_1 1.5|1479168|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR 1479168-1479197 30 NC_048658 Staphylococcus phage SA7, complete genome 10991-11020 4 0.867
NZ_CP009762_1 1.5|1479168|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR 1479168-1479197 30 MK801680 Staphylococcus phage SAP8, complete genome 38051-38080 4 0.867
NZ_CP009762_1 1.5|1479168|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR 1479168-1479197 30 JX094501 Staphylococcus phage SA13, complete genome 14369-14398 4 0.867
NZ_CP009762_1 1.5|1479168|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR 1479168-1479197 30 KJ452291 Staphylococcus phage 3MRA, complete genome 24946-24975 4 0.867
NZ_CP009762_1 1.5|1479168|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR 1479168-1479197 30 MG557619 Staphylococcus phage HSA84, complete genome 40861-40890 4 0.867
NZ_CP009762_1 1.3|1479036|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR 1479036-1479065 30 AJ972879 Yersinia phage phiR1-37 complete genome 109262-109291 5 0.833
NZ_CP009762_1 1.3|1479036|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR 1479036-1479065 30 NC_016163 Yersinia phage phiR1-37, complete genome 109262-109291 5 0.833
NZ_CP009762_1 1.2|1478970|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR 1478970-1478999 30 NZ_CP015507 Bacillus oceanisediminis 2691 plasmid pBO1, complete sequence 34050-34079 6 0.8
NZ_CP009762_1 1.2|1478970|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR 1478970-1478999 30 NZ_CP054613 Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence 1969719-1969748 7 0.767
NZ_CP009762_1 1.3|1479036|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR 1479036-1479065 30 KF905357 Bacillus phage Lima putative DNA polymerase type B gene, partial cds 1030-1059 8 0.733
NZ_CP009762_1 1.3|1479036|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR 1479036-1479065 30 KF905356 Bacillus phage Lutum putative DNA polymerase type B gene, partial cds 1030-1059 8 0.733
NZ_CP009762_1 1.4|1479102|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR 1479102-1479131 30 NC_019760 Microcoleus sp. PCC 7113 plasmid pMIC7113.02, complete sequence 74507-74536 8 0.733
NZ_CP009762_1 1.3|1479036|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR 1479036-1479065 30 NZ_CP033940 Piscirickettsia salmonis strain EM-90 plasmid pPSEM90-3, complete sequence 13648-13677 9 0.7

1. spacer 1.4|1479102|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR matches to KY653117 (Staphylococcus phage IME1323_01, complete genome) position: , mismatch: 1, identity: 0.967

aatggcttacattaacaaattcaacgaaat	CRISPR spacer
aatggcttacattaataaattcaacgaaat	Protospacer
***************.**************

2. spacer 1.4|1479102|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR matches to MF417907 (Uncultured Caudovirales phage clone 7F_7, partial genome) position: , mismatch: 2, identity: 0.933

aatggcttacattaacaaattcaacgaaat	CRISPR spacer
aatggcttacattaataaatttaacgaaat	Protospacer
***************.*****.********

3. spacer 1.4|1479102|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR matches to KY653129 (Staphylococcus phage IME1365_01, complete genome) position: , mismatch: 2, identity: 0.933

aatggcttacattaacaaattcaacgaaat	CRISPR spacer
aatggcttacattaataaatttaacgaaat	Protospacer
***************.*****.********

4. spacer 1.4|1479102|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR matches to MT423824 (Staphylococcus virus pSp_SNUABM-S, complete genome) position: , mismatch: 2, identity: 0.933

aatggcttacattaacaaattcaacgaaat	CRISPR spacer
aatggcttacattaacagatttaacgaaat	Protospacer
*****************.***.********

5. spacer 1.4|1479102|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR matches to MT423823 (Staphylococcus virus pSp_SNUABM-J, complete genome) position: , mismatch: 2, identity: 0.933

aatggcttacattaacaaattcaacgaaat	CRISPR spacer
aatggcttacattaacagatttaacgaaat	Protospacer
*****************.***.********

6. spacer 1.5|1479168|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR matches to MG770897 (Staphylococcus phage SH-St 15644, complete genome) position: , mismatch: 4, identity: 0.867

gtgtaactcctacttgattcgcaacactca	CRISPR spacer
atgacactcctacttgattcgcaatactca	Protospacer
.**  *******************.*****

7. spacer 1.5|1479168|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR matches to AF424783 (Staphylococcus aureus phage phi 13, complete genome) position: , mismatch: 4, identity: 0.867

gtgtaactcctacttgattcgcaacactca	CRISPR spacer
atgacactcctacttgattcgcaatactca	Protospacer
.**  *******************.*****

8. spacer 1.5|1479168|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR matches to MG029513 (Staphylococcus phage phiSa2wa_st72, complete genome) position: , mismatch: 4, identity: 0.867

gtgtaactcctacttgattcgcaacactca	CRISPR spacer
atgacactcctacttgattcgcaatactca	Protospacer
.**  *******************.*****

9. spacer 1.5|1479168|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR matches to NC_004617 (Staphylococcus prophage phi 13, complete genome) position: , mismatch: 4, identity: 0.867

gtgtaactcctacttgattcgcaacactca	CRISPR spacer
atgacactcctacttgattcgcaatactca	Protospacer
.**  *******************.*****

10. spacer 1.5|1479168|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR matches to KY056620 (Staphylococcus phage P240, complete genome) position: , mismatch: 4, identity: 0.867

gtgtaactcctacttgattcgcaacactca	CRISPR spacer
atgacactcctacttgattcgcaatactca	Protospacer
.**  *******************.*****

11. spacer 1.5|1479168|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR matches to NC_014460 (Staphylococcus phage SAP-26, complete genome) position: , mismatch: 4, identity: 0.867

gtgtaactcctacttgattcgcaacactca	CRISPR spacer
atgacactcctacttgattcgcaatactca	Protospacer
.**  *******************.*****

12. spacer 1.5|1479168|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR matches to MK801681 (Staphylococcus phage SAP11, complete genome) position: , mismatch: 4, identity: 0.867

gtgtaactcctacttgattcgcaacactca	CRISPR spacer
atgacactcctacttgattcgcaatactca	Protospacer
.**  *******************.*****

13. spacer 1.5|1479168|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR matches to KY653125 (Staphylococcus phage IME1346_01, complete genome) position: , mismatch: 4, identity: 0.867

gtgtaactcctacttgattcgcaacactca	CRISPR spacer
atgacactcctacttgattcgcaatactca	Protospacer
.**  *******************.*****

14. spacer 1.5|1479168|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR matches to NC_021773 (Staphylococcus phage JS01, complete genome) position: , mismatch: 4, identity: 0.867

gtgtaactcctacttgattcgcaacactca	CRISPR spacer
atgacactcctacttgattcgcaatactca	Protospacer
.**  *******************.*****

15. spacer 1.5|1479168|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR matches to MH401414 (Staphylococcus aureus phage SA45ruMSSAST97, complete genome) position: , mismatch: 4, identity: 0.867

gtgtaactcctacttgattcgcaacactca	CRISPR spacer
atgacactcctacttgattcgcaatactca	Protospacer
.**  *******************.*****

16. spacer 1.5|1479168|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR matches to MK940809 (Staphylococcus phage Sa2wa_st8, complete genome) position: , mismatch: 4, identity: 0.867

gtgtaactcctacttgattcgcaacactca	CRISPR spacer
atgacactcctacttgattcgcaatactca	Protospacer
.**  *******************.*****

17. spacer 1.5|1479168|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR matches to KF831354 (Staphylococcus phage phiBU01, complete genome) position: , mismatch: 4, identity: 0.867

gtgtaactcctacttgattcgcaacactca	CRISPR spacer
atgacactcctacttgattcgcaatactca	Protospacer
.**  *******************.*****

18. spacer 1.5|1479168|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR matches to DQ530360 (Staphylococcus aureus phage phiNM2, complete genome) position: , mismatch: 4, identity: 0.867

gtgtaactcctacttgattcgcaacactca	CRISPR spacer
atgacactcctacttgattcgcaatactca	Protospacer
.**  *******************.*****

19. spacer 1.5|1479168|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR matches to MH401415 (Staphylococcus aureus phage SA537ruMSSAST97, complete genome) position: , mismatch: 4, identity: 0.867

gtgtaactcctacttgattcgcaacactca	CRISPR spacer
atgacactcctacttgattcgcaatactca	Protospacer
.**  *******************.*****

20. spacer 1.5|1479168|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR matches to JQ779023 (Staphylococcus phage SMSAP5, complete genome) position: , mismatch: 4, identity: 0.867

gtgtaactcctacttgattcgcaacactca	CRISPR spacer
atgacactcctacttgattcgcaatactca	Protospacer
.**  *******************.*****

21. spacer 1.5|1479168|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR matches to MH321492 (Staphylococcusphage Lorac, complete genome) position: , mismatch: 4, identity: 0.867

gtgtaactcctacttgattcgcaacactca	CRISPR spacer
atgacactcctacttgattcgcaatactca	Protospacer
.**  *******************.*****

22. spacer 1.5|1479168|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR matches to NC_008583 (Staphylococcus aureus phage phiNM1, complete genome) position: , mismatch: 4, identity: 0.867

gtgtaactcctacttgattcgcaacactca	CRISPR spacer
atgacactcctacttgattcgcaatactca	Protospacer
.**  *******************.*****

23. spacer 1.5|1479168|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR matches to MT013111 (Staphylococcus phage SA75, complete genome) position: , mismatch: 4, identity: 0.867

gtgtaactcctacttgattcgcaacactca	CRISPR spacer
atgacactcctacttgattcgcaatactca	Protospacer
.**  *******************.*****

24. spacer 1.5|1479168|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR matches to KF598856 (Staphylococcus phage YMC/09/04/R1988, complete genome) position: , mismatch: 4, identity: 0.867

gtgtaactcctacttgattcgcaacactca	CRISPR spacer
atgacactcctacttgattcgcaatactca	Protospacer
.**  *******************.*****

25. spacer 1.5|1479168|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR matches to DQ530362 (Staphylococcus aureus phage phiNM4, complete genome) position: , mismatch: 4, identity: 0.867

gtgtaactcctacttgattcgcaacactca	CRISPR spacer
atgacactcctacttgattcgcaatactca	Protospacer
.**  *******************.*****

26. spacer 1.5|1479168|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR matches to NC_048635 (Staphylococcus phage P630, complete genome) position: , mismatch: 4, identity: 0.867

gtgtaactcctacttgattcgcaacactca	CRISPR spacer
atgacactcctacttgattcgcaatactca	Protospacer
.**  *******************.*****

27. spacer 1.5|1479168|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR matches to NC_048713 (Staphylococcus aureus phage SA345ruMSSAST8, complete genome) position: , mismatch: 4, identity: 0.867

gtgtaactcctacttgattcgcaacactca	CRISPR spacer
atgacactcctacttgattcgcaatactca	Protospacer
.**  *******************.*****

28. spacer 1.5|1479168|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR matches to MG029517 (Staphylococcus phage phiSa2wa_st93, complete genome) position: , mismatch: 4, identity: 0.867

gtgtaactcctacttgattcgcaacactca	CRISPR spacer
atgacactcctacttgattcgcaatactca	Protospacer
.**  *******************.*****

29. spacer 1.5|1479168|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR matches to MH384260 (Staphylococcus phage SA780ruMSSAST101, complete genome) position: , mismatch: 4, identity: 0.867

gtgtaactcctacttgattcgcaacactca	CRISPR spacer
atgacactcctacttgattcgcaatactca	Protospacer
.**  *******************.*****

30. spacer 1.5|1479168|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR matches to MG029516 (Staphylococcus phage phiSa2wa_st93mssa, complete genome) position: , mismatch: 4, identity: 0.867

gtgtaactcctacttgattcgcaacactca	CRISPR spacer
atgacactcctacttgattcgcaatactca	Protospacer
.**  *******************.*****

31. spacer 1.5|1479168|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR matches to KP209285 (UNVERIFIED: Staphylococcus phage PhiNM4-gamma4, complete genome) position: , mismatch: 4, identity: 0.867

gtgtaactcctacttgattcgcaacactca	CRISPR spacer
atgacactcctacttgattcgcaatactca	Protospacer
.**  *******************.*****

32. spacer 1.5|1479168|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR matches to NC_048658 (Staphylococcus phage SA7, complete genome) position: , mismatch: 4, identity: 0.867

gtgtaactcctacttgattcgcaacactca	CRISPR spacer
atgacactcctacttgattcgcaatactca	Protospacer
.**  *******************.*****

33. spacer 1.5|1479168|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR matches to MK801680 (Staphylococcus phage SAP8, complete genome) position: , mismatch: 4, identity: 0.867

gtgtaactcctacttgattcgcaacactca	CRISPR spacer
atgacactcctacttgattcgcaatactca	Protospacer
.**  *******************.*****

34. spacer 1.5|1479168|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR matches to JX094501 (Staphylococcus phage SA13, complete genome) position: , mismatch: 4, identity: 0.867

gtgtaactcctacttgattcgcaacactca	CRISPR spacer
atgacactcctacttgattcgcaatactca	Protospacer
.**  *******************.*****

35. spacer 1.5|1479168|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR matches to KJ452291 (Staphylococcus phage 3MRA, complete genome) position: , mismatch: 4, identity: 0.867

gtgtaactcctacttgattcgcaacactca	CRISPR spacer
atgacactcctacttgattcgcaatactca	Protospacer
.**  *******************.*****

36. spacer 1.5|1479168|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR matches to MG557619 (Staphylococcus phage HSA84, complete genome) position: , mismatch: 4, identity: 0.867

gtgtaactcctacttgattcgcaacactca	CRISPR spacer
atgacactcctacttgattcgcaatactca	Protospacer
.**  *******************.*****

37. spacer 1.3|1479036|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR matches to AJ972879 (Yersinia phage phiR1-37 complete genome) position: , mismatch: 5, identity: 0.833

ttgtgattctttattttgtccgtataatct-	CRISPR spacer
ttgtgtttctttattttgtccat-caatatc	Protospacer
***** ***************.* .*** * 

38. spacer 1.3|1479036|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR matches to NC_016163 (Yersinia phage phiR1-37, complete genome) position: , mismatch: 5, identity: 0.833

ttgtgattctttattttgtccgtataatct-	CRISPR spacer
ttgtgtttctttattttgtccat-caatatc	Protospacer
***** ***************.* .*** * 

39. spacer 1.2|1478970|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015507 (Bacillus oceanisediminis 2691 plasmid pBO1, complete sequence) position: , mismatch: 6, identity: 0.8

cttcctctgtcgtttcctccttg---tcacttg	CRISPR spacer
cttcctgtgtcgttgcctccttgatttcat---	Protospacer
****** ******* ********   ***.   

40. spacer 1.2|1478970|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054613 (Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence) position: , mismatch: 7, identity: 0.767

cttcctctgtcgtttcctccttgtcacttg	CRISPR spacer
ctgtgtttgtcgtttcatccttgtcactgt	Protospacer
** . *.********* ***********  

41. spacer 1.3|1479036|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR matches to KF905357 (Bacillus phage Lima putative DNA polymerase type B gene, partial cds) position: , mismatch: 8, identity: 0.733

ttgtgattctttattttgtccgtataatct	CRISPR spacer
agaatattctttatatagtccgtataattt	Protospacer
  .  ********* * ***********.*

42. spacer 1.3|1479036|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR matches to KF905356 (Bacillus phage Lutum putative DNA polymerase type B gene, partial cds) position: , mismatch: 8, identity: 0.733

ttgtgattctttattttgtccgtataatct	CRISPR spacer
agaatattctttatatagtccgtataattt	Protospacer
  .  ********* * ***********.*

43. spacer 1.4|1479102|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR matches to NC_019760 (Microcoleus sp. PCC 7113 plasmid pMIC7113.02, complete sequence) position: , mismatch: 8, identity: 0.733

aatggcttacattaacaaattcaacgaaat	CRISPR spacer
cgtggcttacactaccaaattcaacaaccc	Protospacer
 .*********.** **********.*  .

44. spacer 1.3|1479036|30|NZ_CP009762|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033940 (Piscirickettsia salmonis strain EM-90 plasmid pPSEM90-3, complete sequence) position: , mismatch: 9, identity: 0.7

ttgtgattctttattttgtccgtataatct	CRISPR spacer
gcttgattctttattttgtccatactaatg	Protospacer
 . ******************.**. * . 

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1033085 : 1056672 26 Staphylococcus_phage(90.0%) NA NA
DBSCAN-SWA_2 1060491 : 1067878 6 Staphylococcus_phage(100.0%) tRNA NA
DBSCAN-SWA_3 1182227 : 1193561 8 uncultured_Mediterranean_phage(57.14%) tRNA NA
DBSCAN-SWA_4 1523610 : 1581269 54 Staphylococcus_phage(20.0%) tRNA,protease,transposase NA
DBSCAN-SWA_5 1758981 : 1767401 9 Synechococcus_phage(33.33%) NA NA
DBSCAN-SWA_6 2015914 : 2025624 7 uncultured_Caudovirales_phage(33.33%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage