CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP012159	Chondromyces crocatus strain Cm c5 chromosome, complete genome	44 crisprs	DEDDh,cas6,cas8b2,cas7,cas5,cas3,cas1,cas2,cas4,WYL,csa3,PD-DExK,RT,cas8b3,DinG,cas8c,csm5gr7,csm4gr5,csm3gr7,csm2gr11	10	49	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP012159_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012159_1

498448-498547

Orphan

Consensus_repeat	Method
CCGCTCGCTGACGACCTCCTCGTGCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP012159_1

>merge|NZ_CP012159|1|498448-498547|CRISPRCasFinder
CCGCTCGCTGACGACCTCCTCGTGCATACAAAAACAGGTCGGCTCATCCTGGATCGCACTTGCGCGTCGTGACGCCGCTCGCTGGCGACCTCCTCGTGCA

>NZ_CP012159|1|1|498448-498547|CRISPRCasFinder
CCGCTCGCTGACGACCTCCTCGTGCA	TACAAAAACAGGTCGGCTCATCCTGGATCGCACTTGCGCGTCGTGACG
CCGCTCGCTGGCGACCTCCTCGTGCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012159.1\|WP_082363354.1\|493129_494746_-\|MBOAT-family-protein	unknown	unknown	gnl\|CDD\|224610
NZ_CP012159.1\|WP_082363356.1\|503015_505640_+\|sensor-domain-containing-diguanylate-cyclase	unknown	unknown	gnl\|CDD\|143635
NZ_CP012159.1\|WP_050428802.1\|492738_493113_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050428797.1\|484781_485900_-\|S8-family-serine-peptidase	unknown	unknown	gnl\|CDD\|173812
NZ_CP012159.1\|WP_050428800.1\|491506_492154_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050428811.1\|509442_510567_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|379114
NZ_CP012159.1\|WP_050435654.1\|513759_514689_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP012159.1\|WP_169796428.1\|508056_509019_-\|HEAT-repeat-domain-containing-protein	unknown	unknown	gnl\|CDD\|379311
NZ_CP012159.1\|WP_050435655.1\|514714_515353_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_082363353.1\|485975_488237_-\|HTTM-domain-containing-protein	unknown	unknown	gnl\|CDD\|214802
NZ_CP012159.1\|WP_050428812.1\|510667_511207_+\|DUF2505-family-protein	unknown	unknown	gnl\|CDD\|378476
NZ_CP012159.1\|WP_050428801.1\|492143_492665_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050435653.1\|500229_501018_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372582
NZ_CP012159.1\|WP_082363357.1\|506296_508033_-\|PQQ-binding-like-beta-propeller-repeat-protein	unknown	unknown	gnl\|CDD\|379140
NZ_CP012159.1\|WP_050428799.1\|490296_491409_-\|tryptophan-2,3-dioxygenase	unknown	unknown	gnl\|CDD\|226014
NZ_CP012159.1\|WP_050428806.1\|499142_499805_+\|DUF2914-domain-containing-protein	unknown	unknown	gnl\|CDD\|237030
NZ_CP012159.1\|WP_082363355.1\|496601_497189_-\|DUF4145-domain-containing-protein	unknown	unknown	gnl\|CDD\|372658
NZ_CP012159.1\|WP_050428804.1\|495326_496127_+\|polysaccharide-deacetylase-family-protein	unknown	unknown	gnl\|CDD\|213022
NZ_CP012159.1\|WP_050428803.1\|494784_495321_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050428813.1\|511203_513738_+\|signal-peptide-peptidase-SppA	unknown	unknown	gnl\|CDD\|132934

Protein	Function_ID	Function_description	E-value
NZ_CP012159.1\|WP_082363354.1\|493129_494746_-\|MBOAT-family-protein	gnl\|CDD\|224610	COG1696, DltB, Predicted membrane protein involved in D-alanine export [Cell envelope biogenesis, outer membrane].	7.2047e-86
NZ_CP012159.1\|WP_082363355.1\|496601_497189_-\|DUF4145-domain-containing-protein	gnl\|CDD\|372658	pfam13643, DUF4145, Domain of unknown function (DUF4145). This domain is found in a variety of restriction endonuclease enzymes. The exact function of this domain is uncertain.	1.78954e-18
NZ_CP012159.1\|WP_050435654.1\|513759_514689_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	1.95083e-16
NZ_CP012159.1\|WP_050428797.1\|484781_485900_-\|S8-family-serine-peptidase	gnl\|CDD\|173812	cd07487, Peptidases_S8_1, Peptidase S8 family domain, uncharacterized subfamily 1. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.	2.66287e-30
NZ_CP012159.1\|WP_082363357.1\|506296_508033_-\|PQQ-binding-like-beta-propeller-repeat-protein	gnl\|CDD\|379140	pfam13360, PQQ_2, PQQ-like domain. This domain contains several repeats of the PQQ repeat.	3.56864e-06
NZ_CP012159.1\|WP_050428811.1\|509442_510567_+\|AAA-family-ATPase	gnl\|CDD\|379114	pfam13304, AAA_21, AAA domain, putative AbiEii toxin, Type IV TA system. Several members are annotated as being of the abortive phage resistance system, in which case the family would be acting as the toxin for a type IV toxin-antitoxin resistance system.	2.58306e-22
NZ_CP012159.1\|WP_169796428.1\|508056_509019_-\|HEAT-repeat-domain-containing-protein	gnl\|CDD\|379311	pfam13646, HEAT_2, HEAT repeats. This family includes multiple HEAT repeats.	1.58253e-06
NZ_CP012159.1\|WP_082363353.1\|485975_488237_-\|HTTM-domain-containing-protein	gnl\|CDD\|214802	smart00752, HTTM, Horizontally Transferred TransMembrane Domain. Sequence analysis of vitamin K dependent gamma-carboxylases (VKGC) revealed the presence of a novel domain, HTTM (Horizontally Transferred TransMembrane) in its N-terminus. In contrast to most known domains, HTTM contains four transmembrane regions. Its occurrence in eukaryotes, bacteria and archaea is more likely caused by horizontal gene transfer than by early invention. The conservation of VKGC catalytic sites indicates an enzymatic function also for the other family members.	3.04622e-38
NZ_CP012159.1\|WP_050428812.1\|510667_511207_+\|DUF2505-family-protein	gnl\|CDD\|378476	pfam10698, DUF2505, Protein of unknown function (DUF2505). Members of this family are all Actinobacteria. The function is not known.	5.00331e-06
NZ_CP012159.1\|WP_050435653.1\|500229_501018_+\|hypothetical-protein	gnl\|CDD\|372582	pfam13369, Transglut_core2, Transglutaminase-like superfamily.	5.59373e-52
NZ_CP012159.1\|WP_050428799.1\|490296_491409_-\|tryptophan-2,3-dioxygenase	gnl\|CDD\|226014	COG3483, TDO2, Tryptophan 2,3-dioxygenase (vermilion) [Amino acid transport and metabolism].	1.92177e-70
NZ_CP012159.1\|WP_050428806.1\|499142_499805_+\|DUF2914-domain-containing-protein	gnl\|CDD\|237030	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.	7.20635e-06
NZ_CP012159.1\|WP_082363356.1\|503015_505640_+\|sensor-domain-containing-diguanylate-cyclase	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	5.42876e-59
NZ_CP012159.1\|WP_050428804.1\|495326_496127_+\|polysaccharide-deacetylase-family-protein	gnl\|CDD\|213022	cd10917, CE4_NodB_like_6s_7s, Catalytic NodB homology domain of rhizobial NodB-like proteins. This family belongs to the large and functionally diverse carbohydrate esterase 4 (CE4) superfamily, whose members show strong sequence similarity with some variability due to their distinct carbohydrate substrates. It includes many rhizobial NodB chitooligosaccharide N-deacetylase (EC 3.5.1.-)-like proteins, mainly from bacteria and eukaryotes, such as chitin deacetylases (EC 3.5.1.41), bacterial peptidoglycan N-acetylglucosamine deacetylases (EC 3.5.1.-), and acetylxylan esterases (EC 3.1.1.72), which catalyze the N- or O-deacetylation of substrates such as acetylated chitin, peptidoglycan, and acetylated xylan. All members of this family contain a catalytic NodB homology domain with the same overall topology and a deformed (beta/alpha)8 barrel fold with 6- or 7 strands. Their catalytic activity is dependent on the presence of a divalent cation, preferably cobalt or zinc, and they employ a conserved His-His-Asp zinc-binding triad closely associated with the conserved catalytic base (aspartic acid) and acid (histidine) to carry out acid/base catalysis. Several family members show diversity both in metal ion specificities and in the residues that coordinate the metal.	1.10414e-62
NZ_CP012159.1\|WP_050428813.1\|511203_513738_+\|signal-peptide-peptidase-SppA	gnl\|CDD\|132934	cd07023, S49_Sppa_N_C, Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. This subfamily contains members with either a single domain (sometimes referred to as 36K type), such as sohB peptidase, protein C and archaeal signal peptide peptidase, or an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Site-directed mutagenesis and sequence analysis have shown these SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases. Interestingly, the single membrane spanning E. coli SppA carries out catalysis using a Ser-Lys dyad with the serine located in the conserved carboxy-terminal protease domain and the lysine in the non-conserved amino-terminal domain.	8.63748e-75

>NZ_CP012159.1|WP_082363355.1|496601_497189_-|DUF4145-domain-containing-protein
MLEAINTHLQDPQYLRIAICAGCSRSTIEAALPRGTEGGPTFFRIWPQGVARPLPPEVPEEFAEDYREASLVLSASPKASAALSRRALQFIIHKQAGIMKKALVSEIQALIDGGTLPSSIARKLDVIRRIGNLAAHPTEDHQTGAIIPVEPDEAEWLLDVLYDLLDFYFVKQAKDARRTAALDTKLAVVGKPPKK
>NZ_CP012159.1|WP_050428804.1|495326_496127_+|polysaccharide-deacetylase-family-protein
MSIGRALLYAASAGAIALAVRSVLLGPISLTVAAVAIAAYVGLLLAGVFILRLGMYADVICRGPSEARGVALTFDDGPSPVHTRAVLDLLDAEGVKATFFVIGRKAEAHPALVQEIAARGHALGVHGYAHDRLFSLRSERFIEADLARAVEVLERLTGKRPTLVRPPVGHTSPPMARIFQKLELEVVGWSVRGFDGLGSARPEKVAERVISGLGDGAIVLLHDAAERDDHEPAGVKALPRILQAMRNKDLVGVRVDRWIAEADVTG
>NZ_CP012159.1|WP_050428803.1|494784_495321_+|hypothetical-protein
MLGRLLIGIVKGLIVGALIAFGLGQLGLGAPGALFAYVAAAVTGILVGLVAGKPIWAKDARIEAGMKAFVGALLAAGLMYVTRRWLTMSVPPQLATVAGPTGGETAFGGLAITSLPAIAALLAGFYEVDNTPEDEAPSANEGKAAPRATPNKRIAANADDLDLDEDLDADADRKRAKK
>NZ_CP012159.1|WP_082363354.1|493129_494746_-|MBOAT-family-protein
MAALPGSHFSFERCHVLFNTLDYAWFFALAFVGSWALALLAGAVRRPLSATGGSSTTGAGGNSGTTDDETQAPGRNRALGWLGSSWPRVIFLLALSYTFYSFWNWKYLPLIFGSSTVDFFLARAIGREERPRVRKALLVVTVVLNLGFLGFFKYWNFAVENVHTVRELLAGAPVSAFDTLKVTLPPVGISFFTFESMSYVIDVYRREMPPHRSYFRYLLFVAFFPHLVAGPIVRPRDLLPQFERMPTLTRDEAGEGMFLVAVGLLKKVVLSDQLAINLVDRVFERPENYSALEVLAGVYGYAAQIYCDFSGYTDIAIGSALLLGVRFPKNFDAPYQATDLADFWRRWHISLSTWLRDYLYIPLGGNRMSEWHTYRNLMITMVLGGLWHGASWTFVFWGFLHGLGLGVTRAFQRSRAKAGKQSAKGRPFPIRAAMVLLTFHYVCFAWIFFRAPSFKQAMLVLKQLATMTTFHPNLPGILVGLLAVAIGCCYVPRALYERIRHGFTVLPAPLQGVVLFLVAVVLHEAASAAAVPFVYFQF
>NZ_CP012159.1|WP_050428802.1|492738_493113_-|hypothetical-protein
MSVVGSAFLEVVRRDGLGPARGGVALVGLLGGLALLGASGCGAFANGYKQAAPMVRERASYELDCPDQEVRLEEELGGWFKAVGCGRKARYRAACDGLRCVVSGENETAIPWRDRPPPGDVVTR
>NZ_CP012159.1|WP_050428801.1|492143_492665_-|hypothetical-protein
MADEADRERTAPDEERDPAPRERPGDADAAVEESSSRASAAAEGAESAGSVGDVDGARPKRKKKKRRAADDAAEGEREAGPRRPAWWPAFARQYPEDPTLDRLVAAFEDGNYAVVRVEAEQLAKGSEREAVRRAAADLRRRVDPDPLAVVMLLASVGLLVFLSAWYWSHGHGP
>NZ_CP012159.1|WP_050428800.1|491506_492154_-|hypothetical-protein
MVREGLALALLGLGFGCGSGATPARNAENDAPHGGMLVLEATASGTRCERYFPLVEGIVYQYVISRAAQPAGVVVTRAHRADALTGELRVGAEAKGFVYRPEGVMRAGLGVYVLREPLLVGSSWPGAHGGQERVVAVDVIAEVPAGRFAGCIRTQEDQPGELLSTFSSTYCPGVGLVVLEVSGDAGDERAELQSYGPPVDLGPDGISRIPVTPPP
>NZ_CP012159.1|WP_050428799.1|490296_491409_-|tryptophan-2,3-dioxygenase
MSTPPGTNYWDYIRVEDLLSLQGGYERDERKLGNDEVMFIVVHQVYELWFKLILRELTTARDLFMKEPVPDVELAAAARSFRRVVTIFQQAVNHFQVMETMTTRDYLEFRDQLIPASGFQSAQLREIEILLGLDDDRRVPLGKESSYKQALKMGQGEPAPALDRVEARLAGGPPLKEVLYRWLSRTPVDGPSDPKVVRRFLEKFIASMRDEVARRVEIAVEKALTPADVERLRERYETEVRNAASFLLAEDDPSADEETREKRQAIRAGLVFIESYRELPRLAWPREILDAVIDMEQSMLIWRQRHARMVERVIGRRMGTGGSAGVDYLDQTALRYRIFSDIWAVRTVLLRKPVVPPIAHAEDYGFRVED
>NZ_CP012159.1|WP_082363353.1|485975_488237_-|HTTM-domain-containing-protein
MGGAADRAAGRDEGRDRDAREAVQPRQGGARDRDGQGAARARGVAPLKGGRAVGVGTRLRRAKQWLLERYGTADLRTLGLFRIVFGTLLVAEGLRRWREADWAYSNEGVLSNHYQLFVNYRPSGSYSFSLFDAFSTLGEVHVAFALSVACFFCYAIGWKTRLFAILSFVIVTSLDSRLPLVENGGFVVVNLLAMWAMFLPTGARFSVDAWRRSSRERREAGAEALAAPPAPPAPARSAGAPATFVSWAMVFAVLNVAMIYYFNVVNKAGHIWREGDTVHYVLHLDRMVTGLAVPLREHLPFWAMKLMTWGVLVVEALLPPLILWPTARRVTRPLAMLLMFGLHTSFGVMMRLGPFSWFMIGWSFLLVTSVQWEGLERWYRARAMPRVVVVDGASPLAFALARVLARFDGLGLLRFEAQGAQSVPSVQGAQSAQSVPSVPSVPSVQPALLSARDPASGRVWVGGEALREIAQALPAGRMLWPVVNVVTVGAPRWGMALMERRREAVARFFGLTLPSRWVSMPLVGMSLAEASLTEPSLVEAPLVVTPLAAWMGRWRRRLREGVVLYVGLCAASQMINDNKSVSAVMKHDRFVPWFMRATMAYPRLYQSWGMFAANPITDDGVLAVDAITVDGRHVDPFTGTAPDLVLTDSRGEGLNQIRQDYFNRIRLDRNKVFRKPQGLQEYLLRYHERTGQADDEVVAFDVFWVRDQCPKPGERTAYANETVPILSYRRPNYRPRAGLPPLPKALKEESAGD
>NZ_CP012159.1|WP_050428797.1|484781_485900_-|S8-family-serine-peptidase
MLRPQFLSIPERLEASREHRGRGVVMGFVDVGFYPHPDLMQPRRRIKAYADAAQDEPVGSEFFTAQPYGWHGTMTACSAAGNGYVSGGRYRGLASEADVVLIKAGIDGGRVRGKHVAHAIRLPLRYPQLGIRILNVSLGLFHDDPDRHDVERAVKEVVEAGITVFAAAGNTAGQMPPLPGAAAEAITVGGGRIRGIEEGEDAPWPSSYGSPKPGVHKPDLLAPAIWVPAPMLPGTLVAREAIALFQLLTVLEEATAEHGFSETRQTATPDEQNSVQGLLRAVAGRIERCKYISQEYQHVDGTSFASPITASVAAQMLEACPKLTPKELREGLLATAEPLKNVDRAVQGAGVLQPLRAVEWAVRRAAGDQSSA
>NZ_CP012159.1|WP_050428806.1|499142_499805_+|DUF2914-domain-containing-protein
MKTATTWISALALSTAMLALGCNDATPREQVVAPVQNDQVAPSAQVAPAATAASLPSCATPTPSALAQADQPTSAEAAPKTAAAKTAAAKTAAARAEGRAPGAAARDGAPVKVKRLVLTEQIEGREPSTAKSTFSGAEAKKIYAFVEVENPSEGSSEITVSFEPPDGSGARGQVTLDVGASRRWRTWAFTRGAKVAGSWTAVVHGPSGEELARAPFEVTL
>NZ_CP012159.1|WP_050435653.1|500229_501018_+|hypothetical-protein
MEAPVNLTLFAHVIARSEDEIDLAEAALLIAEAEHPGLEVPRYLAMLDRLGADVRRALDQPLDHTEATVGSAPVEHVLQVIYGQHGFRGNSTDYYDPRNSYLNQVLDRHLGIPITLAIVLLEVCRRAGITAHGVSFPGHFLVRSPLPALPSSGRGALSNRALLIDPFEGRLLGREELKALAARATGSNQEPDPRLLQPASKRQILVRMLSNLRAIYSKRQDPERLREVLERIQVLSPSEELRKELEQIGGRQPWPQRAHLLN
>NZ_CP012159.1|WP_082363356.1|503015_505640_+|sensor-domain-containing-diguanylate-cyclase
MANLVQAIVSVRRATRRAAALLGALGLAGLLLLDASEPLATPYAAVAAIGLGLLFAHRVAARRAVAVAPPTSAGARKGSSTGGAALLDLEIGALLVIATVGAVLRIEGTLDGRAQAAMYVVIALVSAFARPASSIGVVLFAGALDVGVRWVTGGAAGELGLAMVPHLGFMGVFALLNAAVLRAELGRVRRMSRGRLQAEIERLRDDARSYRLLGAPSVTPAAEKREAEITTTEKAAGGGASTSTSADVERLVRSGVEEIHQSVLFALRLLRESLRLHTAMLLWQNDAGTHLRISELASDATDLLEGPFLAGDGVFGAALTQRAPVVVGGLKPGYKLPYYEGACPARAVCALPVFEHGRVRGVLVVDRVEDRPFLPKEVDLVEEAARYAVRAIQNERVFVQLERAKAEQGKLYRAAEALGRATTEGEVVEAGVQSAREITSVDFAAVTLFDEGSGHHEIRAASGEGVEELLGQRFRQNAGLVSMALQNRHPLPYRGEYDEKRQVVFTRRVSPPSMPSIYVMPLLVHDRPLGTLVLGSRRRSAFNDSVRGTLEVLASHMAVSLSNARMLRRLEELATTDGMTGLLNKRAMLEMAEQKLTAARRFQRRLSVLVTDIDFFKKVNDTYGHDAGDVIIKGLGEILRKAKRTTDAVARFGGEEFVVICEETDARGAMLLAERVREELERATFHTPGKEGAVPVQVTCSVGVATFPEAGSTWDELFKAADEALYSSKRSGRNRTTAWSPALRGHGAEAPKEKATPKEKAAPKEKAAPSLAGASHGSMAPRSSSGSMAPRSSGGVQGTLGTPRVATPSASSGSMAPKAPSSGMSSGKPASMTPPPGPGKLGGSGTGGAGGAGTTGGGAPGKGRGVKSPARTAA
>NZ_CP012159.1|WP_082363357.1|506296_508033_-|PQQ-binding-like-beta-propeller-repeat-protein
MILAVAASSCGGGQTQGAVFDPLWADDNGAAITKLQQQIARAPLARGVDVAVGVASEGGRTVLLGAPLRGGDPWRFEHALDTRPTVTGTVVIGFGDRKLFALDAATGKLLWTRLVQGRLRAAGDDGHTTVISMEPRTGRGSVLFVVTHEGEVLRQIEDEHDIGVPAVAGRYAFLPWQGQFVTALDLLRGNEAARALLRTETSRAFAVGGALFFGGAAVTRFDDKIGLGAQNKATTVALPSVELPGVPQWIPSGTEVISPRTSALDKTRIYARPSATGPAGIVGDRFAATYFRVVTGLDARSGGLAWVNVGDADFIGGAAYDGGFVLCDDRGDITFFDAAHGAASARLSLGAPLRSCVVQADGIKIAPRPRNEPLWKQLEQVVSLPDAELAAIQRFVLRELAKQPEEEVTSVLINVASQGRGATALHDEARRALAQRRNGGKFLLKALERRVDFLAGSLRAPPVGPIAEALAAMKEKKGAPLLTEHLLDPETSTADLGQVAAALAVLAGPAELPSLRTFFAMYRGVSDESLDPALAQVSDTLRRLGAVELLTRAVTDPWTAPALRKHLEASGASPARKP
>NZ_CP012159.1|WP_169796428.1|508056_509019_-|HEAT-repeat-domain-containing-protein
MPDLRRENVGRARSAALIVSLIVHAVSSTAAFEVQAATPADAAPRKDDAPGGKTKPAAPLPAGDIASLQRKLASTDAADVDSALLDAQSAGPSAAALAPSVEELLRRGATPPLMTAAVKTLGALGQVTSSAVIRPYVRHRVPSVRHEAARALASTKGPDALAALRDALRSGDPVLRGLAASGLGQLGSRDALPELFLALDRDVPGSAAAIGLLCDPPACRKLLAKMGSISFDTLTSGLERCLLRPTALPEPVLLEIVERVRNLATPHARRFLVDVDARWPSAASSRIKAALEAAIAAIRVESTPSEPEGAPATDTSETYP
>NZ_CP012159.1|WP_050428811.1|509442_510567_+|AAA-family-ATPase
MITQLTVRNFRCLQDVTTTLSPFTVLIGSNDSGKSSLLDAIYTLGRTAREPLPESLVTEGSHGPTPFEELVWQRNVARSMVWRVQGDSRGKRFAYELAVRAGPYVRFEKLPLHPVHLVASAATPRETRLRASLRSQPELAPLVAGFTSVGKYRFDPRALRRVAPIAADPQISSSGDNFAAALDALLTGPDRATLRAFELGLREAIPTLAGVSMRAVPLSNGFGKAVEFILAGTRPPVTVPASSASEGALLFAAFLMLTYGATPDILLIEEPENGLHPSRLEAVIALLRSVSEGEVGVRPRQVIFTTHSPWVLGHVKPEEVRIFRRDAEKGTEIIPLSSVPDLDRLRTLPPPDLWYFLTESGNIGTMDDLRPAPR
>NZ_CP012159.1|WP_050428812.1|510667_511207_+|DUF2505-family-protein
MRFSIVHELDAPFDAVSLALLSPELGPRLGQRVNSLESVVTVEHAIHEGEMRRVLRFQAAAPLSVFKGYDLARDAMAWDEIFHYKLAGGASSWRIAPVALEGSAGSGEKKGRERWKDHFRAEGTYRLEALPGGRTRRSVEGMLDVRLSMIGALVERMALVEVRKTYDAEADTLRELAVV
>NZ_CP012159.1|WP_050428813.1|511203_513738_+|signal-peptide-peptidase-SppA
MIMRNRLALLVTACASSALVSVSSVAAPPERASQAVPDPGRSLAGGDDASAIAVNPANLAFLPAPEFRWMWVRPGSSSPIPAAGHSFSLGLPLWALSTGLRLDLLDPPDAAPAPFDAPYRWVRWGLALRASDSFSIGTTLGWGSSGALALDGHFSVTTGLTLRPLPHLSISAVARDWNEPQNRLGQAIERSYDVGVAIRPLGRRMLELGAEATYFERSQEVSPRFTMGVDVPRVGRLRGEIALRDLTGPARPGIAAMAGLEVNVSGLQVLGGGVFGDAYTRGGSGFYVGAALRAYREPGVLATRRVAKVRIDATPGARAHTRLLQKLWRLADAGEVDGVALVVRSEPASSTAHAEELGDALRLLRSRGKKVICHLEDAGGRSLHVCSQADAIAMNPAGGLRFAGLSTRYFYFGDLLRKLGVQADFVRIGAHKLAAEQLALPRGTPIAAEDHQQLVDRLSDVFAHDVGGGRRIPKKELSRRISRGPFVAREAKEAGLIDLLAYDDELDKVVEEVMGARVSVVDDSPPKNAPERWGSEPKVAMVYVDGDMVDGESQNIPLVGVRLSGSYTVARALKKAREDRSVRAVVLRVETGGGSSLAADVILREVILTARAKPLVVSMGSSAASGGYYVSVGGGTIYANRATVTGSIGIYYGKVDVSGLLEKLGIKAEGYRSSPRADAESFFRAYTDEEREILGVKVKQFYDTFIGRVAEGRKLKPEQVDAVGRGQVWTGAQALERGLVDKLGGLREALAEARELGGLREDAQVLALPEEDEGLLGLALKLAGVSAGAAAQGLGPVAAMPPALLDIARSLSPFLVFEPSRPLARIEVVEEASMGGRVTVPAEP
>NZ_CP012159.1|WP_050435654.1|513759_514689_+|ABC-transporter-ATP-binding-protein
MIQLSTPSALLEARGARVSVDDVVALEGLTFVARGDRVLCAGDTQALFAAVSGMPLMPRGQATPGDAPGEARVVAGSLLLAGRDVSRAEQLSVMGVAPLDPPLPPAWTAEAYVTWSARLGGAGAFVARGTAAASLTLVGLGHARHRRLDGLALPERRAMMLAAAIVLSPEVVVLEDPLSGLDGMAAAFVLSAIAAATRGRRALISTGRLDRTGPTGALVGGASDLLVLSAGELVFAGTPADASGGRRLFALVVRGQTESLQEALSARGLTLRAGAGRLLVSLPEGASTRAIVEAAAEVRAPIVEMVPVI
>NZ_CP012159.1|WP_050435655.1|514714_515353_+|hypothetical-protein
MVTKSSVATAASPITPPQGRLAVLTGFAVAAAAVPVPVLPARLLARVRGAIVHDIVSRHGLSLTTDARKILADPGEGHATLRKAAETVALELLRRLRALGSVAAAVRGLEVYALGHLLDRYITTVRRTGTIRIHADEARKIRELITRAIARTLSPSLTPAAALLPAAGEDLRDEFTRWVDTLLLGSASAPDYLKRRLSAAFDDIVRSSSTGD

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Crispr_ID: NZ_CP012159_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012159_2

649101-649242

Orphan

Consensus_repeat	Method
GTCGGCCCCTACGCTCCCGATGGTCGCTACCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP012159_2

>merge|NZ_CP012159|2|649101-649242|CRISPRCasFinder
ATCGGCCCCTACGCTCCCGAAATCAGGGGCCCGTCGGCCCCTACGCTCCCGATGGTCGCTACCCGGGATGTCGCTGCAACGCGTCCGGCGATGAACTGAAAGCAGGGGCTGTCGGCCCCTACGCTCCCGTTGGTCGCTACCC

>NZ_CP012159|2|2|649101-649242|CRISPRCasFinder
ATCGGCCCCTACGCTCCCGAAATCAGGGGCCC	GTCGGCCCCTACGCTCCCGATGGTCGCTACCCGGGATGTCGCTGCAACGCGTCCGGCGATGAACTGAAAGCAGGGGCT
GTCGGCCCCTACGCTCCCGTTGGTCGCTACCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012159.1\|WP_050428907.1\|661919_662603_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|222854
NZ_CP012159.1\|WP_050428895.1\|641219_642893_-\|RIP-metalloprotease-RseP	unknown	unknown	gnl\|CDD\|100084
NZ_CP012159.1\|WP_082362170.1\|638639_639737_-\|metallophosphoesterase	unknown	unknown	gnl\|CDD\|277331
NZ_CP012159.1\|WP_050428893.1\|636740_638588_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
NZ_CP012159.1\|WP_050428903.1\|651869_652328_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237030
NZ_CP012159.1\|WP_050428905.1\|653647_657556_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050428904.1\|652396_653506_-\|UDP-N-acetylmuramate-dehydrogenase	unknown	unknown	gnl\|CDD\|237552
NZ_CP012159.1\|WP_050428908.1\|662553_663582_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236766
NZ_CP012159.1\|WP_050428899.1\|646653_648243_-\|bifunctional-metallophosphatase/5'-nucleotidase	unknown	unknown	gnl\|CDD\|223808
NZ_CP012159.1\|WP_050428901.1\|650155_651370_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050428894.1\|639803_641174_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|237857
NZ_CP012159.1\|WP_050428897.1\|643776_645798_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_082362171.1\|646043_646541_-\|TraR/DksA-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224648
NZ_CP012159.1\|WP_050428892.1\|636031_636538_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050428906.1\|657732_661098_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227021
NZ_CP012159.1\|WP_156338075.1\|663982_664345_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050435665.1\|649373_649949_-\|peptide-deformylase	unknown	unknown	gnl\|CDD\|366575
NZ_CP012159.1\|WP_050428900.1\|648443_649088_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050428902.1\|651398_651686_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050428896.1\|642957_643614_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237000

Protein	Function_ID	Function_description	E-value
NZ_CP012159.1\|WP_050428907.1\|661919_662603_+\|AAA-family-ATPase	gnl\|CDD\|222854	PHA02518, PHA02518, ParA-like protein; Provisional.	1.34048e-41
NZ_CP012159.1\|WP_050428895.1\|641219_642893_-\|RIP-metalloprotease-RseP	gnl\|CDD\|100084	cd06163, S2P-M50_PDZ_RseP-like, RseP-like Site-2 proteases (S2P), zinc metalloproteases (MEROPS family M50A), cleave transmembrane domains of substrate proteins, regulating intramembrane proteolysis (RIP) of diverse signal transduction mechanisms. In Escherichia coli, the S2P homolog RseP is involved in the sigmaE pathway of extracytoplasmic stress responses. Also included in this group are such homologs as Bacillus subtilis YluC, Mycobacterium tuberculosis Rv2869c S2P, and Bordetella bronchiseptica HurP. Rv2869c S2P appears to have a role in the regulation of prokaryotic lipid biosynthesis and membrane composition and YluC of Bacillus has a role in transducing membrane stress. This group includes bacterial and eukaryotic S2P/M50s homologs with either one or two PDZ domains present. PDZ domains are believed to have a regulatory role. The RseP PDZ domain is required for the inhibitory reaction that prevents cleavage of its substrate, RseA.	5.55523e-49
NZ_CP012159.1\|WP_082362170.1\|638639_639737_-\|metallophosphoesterase	gnl\|CDD\|277331	cd07385, MPP_YkuE_C, Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	2.35728e-50
NZ_CP012159.1\|WP_050428893.1\|636740_638588_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	5.53913e-95
NZ_CP012159.1\|WP_050428903.1\|651869_652328_+\|hypothetical-protein	gnl\|CDD\|237030	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.	0.000527716
NZ_CP012159.1\|WP_050428904.1\|652396_653506_-\|UDP-N-acetylmuramate-dehydrogenase	gnl\|CDD\|237552	PRK13903, murB, UDP-N-acetylmuramate dehydrogenase.	1.17213e-132
NZ_CP012159.1\|WP_050428908.1\|662553_663582_+\|hypothetical-protein	gnl\|CDD\|236766	PRK10811, rne, ribonuclease E; Reviewed.	1.80003e-08
NZ_CP012159.1\|WP_050428899.1\|646653_648243_-\|bifunctional-metallophosphatase/5'-nucleotidase	gnl\|CDD\|223808	COG0737, UshA, 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism].	6.77772e-53
NZ_CP012159.1\|WP_050428894.1\|639803_641174_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|237857	PRK14902, PRK14902, 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB.	3.16028e-86
NZ_CP012159.1\|WP_082362171.1\|646043_646541_-\|TraR/DksA-family-transcriptional-regulator	gnl\|CDD\|224648	COG1734, DksA, DnaK suppressor protein [Signal transduction mechanisms].	9.8043e-20
NZ_CP012159.1\|WP_050428906.1\|657732_661098_-\|hypothetical-protein	gnl\|CDD\|227021	COG4676, COG4676, Uncharacterized protein conserved in bacteria [Function unknown].	1.38749e-17
NZ_CP012159.1\|WP_050435665.1\|649373_649949_-\|peptide-deformylase	gnl\|CDD\|366575	pfam01327, Pep_deformylase, Polypeptide deformylase.	3.56188e-58
NZ_CP012159.1\|WP_050428896.1\|642957_643614_-\|hypothetical-protein	gnl\|CDD\|237000	PRK11855, PRK11855, dihydrolipoamide acetyltransferase; Reviewed.	1.77427e-05

>NZ_CP012159.1|WP_050428900.1|648443_649088_+|hypothetical-protein
MTLSSSRLRNVLFVAFIQLFGAACSAQGSGNAGAGGATSTSSSESGLGGIGGLGGAGGAADEPLEGVATICFNVCDSLQQRGCLLSSFEDCVTNCIETFVSVPECARERAVYEQCLIDERTADCAEPAVCAESLAAWQYCTTGGCVDVLCSPKNGGCSCKGTCLDRNVTVECVPNDDEGATCTCKEGSTTVGTCQSELIACFPSKGCCAPLLNL
>NZ_CP012159.1|WP_050428899.1|646653_648243_-|bifunctional-metallophosphatase/5'-nucleotidase
MEHAGSRETRSFLSRRRRHLAGALALLAPLVLLTCGRATTPPEAGPARAVEDRDRAPATVTLLYTTDEHGWLLPSHEQGEVRGGAAELLAQWITREGHCPGSPGARTPEVQACKDPGTLALSGGDNATGPAISSYFQGVPMAEAMGRMGYAASAFGNHEFDFGSAGFLRNRSVSGMSYLAANLKVRGQGLAALELPAFAIYERRGIRIGVIGLATEDTLRTAMASRFDGIELESEEAALERVVPEAWRAEPDALVLIAHECPTKLEPILARHPEWRFSFVGGGHCHKKSETRVGDAPLVNPGWRLRSYARVQLEVDPRRPLGKRVLSNKAEIVEVSHPEGEAPADEGVARVGATWQAQLEQALGEPIGYTGGMERDSRALSHWIGTSWREVLGVDVAILNKGGIRQAVPRGEITKATVYSVLPFDNKLLVCSLKGREIVQHLGHREAVGVGITPGRNGRFTLDGGRPLDEDATYTVATVDFLYFGGDGFTFQGQDPSPRWTGVDWREPVISYTRTLVTTPTAPLEHKIH
>NZ_CP012159.1|WP_082362171.1|646043_646541_-|TraR/DksA-family-transcriptional-regulator
MSVEDSSGSKRNVGPGVPAAGAPARPPTRASAPQDDDDGPQELSAAQLDELRRMLQDRRAAIVGSIGERQNEERDVSGSRVVGDEMDEATLEGTTSMTGKLLERDVRLLFEIDRALAKLRENAYGVCEGTGEPIGYARLRLQPWARFSVEYQEELERQERTRGGR
>NZ_CP012159.1|WP_050428897.1|643776_645798_+|hypothetical-protein
MRTLLPLSFSTLLAVGCGPATPTPDDPTTPPSTSPPPAAVATSAPYDLSPVPEPGDVVGFARWANPANTITTLAGCAGVPPQLTEGTSRFAVEAILDALFPGATDQKQLAAVVALDAPVFAVTVLDPGSKRGRPLSAVSVGLTSLEGARGAVERLGTPTELSPGVWRVGGKEEAKFSCAIAAAAGSAPARLVCAERERDLVTLTPYVTRTLPSTPAEGRDLRAEIRLVPITDKFGGIARQQLRGIPILAQSQLTIGDPLFDSTVMETANALATEVGALIGDADKLSLEIGSDPTSCLTVSGALALRGNTSWLGATITDQARVMAPPPALFWRLPKDSEAATFSHGGDGPRLAPIFKSLGDLLEGYLGKEKIGGAADRKALADLLRKVPLSKDVTGVSASGGGQKQAPPRSDKAPAAQQELEQLLDDLLGWTLMGITEKPDAINTYFKNLVAAYNRPGLLNTLKKELKNDAKFLPVVKTVPAPKELGKNGFAVQISWKDLPAPNTDPLDGAGPTAKGKAAKITLDAYVYVMDEGTTTWMAVGTNKQELLKRLSMVKAGAPEDATLATRADLAQLKNAKVGSGGYFTIAPFTRSVGQSLGAVFRPLGGGTPALQQALGVLNGLPHKGAGPIFFSTLSEGGSAPKARFTINMTKPSLEDAGALIASGLKVAQSLRP
>NZ_CP012159.1|WP_050428896.1|642957_643614_-|hypothetical-protein
MSALFGAWALAACGASEPPPPAAPPPAPPPPVAEPEPEPEPEPSAPPADAKPEPAQSSGRTPLFKSDPEEITDSFGSSPAAKLELGDDTGRATLRIPENALSQGVNITFKIEKKGKTSGPPIGKVYRTSGVVPPDGTPREIESAGPVFELAFPAGNKKDANLAIGTISLDDKGREKIDWIVVAPKRIDDAMGLAYFELSKLPNAYLHITTKAPTEPKQ
>NZ_CP012159.1|WP_050428895.1|641219_642893_-|RIP-metalloprotease-RseP
MDLLYFALLCSVLIFVHELGHFVCAKLFGVKVLTFSIGFGPKILRLRGRETEYCVGLLPLGGFVKMLEETRQEPVLPEDRRRTFEAQALWKRVIIVLAGPAMNVLFPVLLYFAVFVGETRFVPPTVGAVLPAHPAEGKLHPGDRILEVDGERITTFAELQRIVAKNPGQELKLKVFRDRQHVEVKVIPEEKVIQKPLEIVERIGELGIRPSRPAPVIGISRLDSPAYRAGLRSFDLVTEVGGRPIKTWTDLEQALTDNRGATVPVTYLRPMPVTRALGGLADMAVYESGVAALTPESGVADLQSRAGIEHADLYVADVPQGSAEWKADLRPGDRITEVDGVEVTAWSTFTERLFASPDKPHVITWLRAGQRKSGTIELRREDYLDEYGQTRPRFFLRATNWSPMVPEPYVEGGPAAIRLAFENALDETYDVIRFIMVGILRIVEGKVSISTLGGPITVYDVVGEEGAKGVSYFVWAMAVISINLGLINLLPIPVLDGGHLLFFTFEAVLRRPLPLRVREIASLAGLMILVGLMGIAFKNDVERRWDVIQGQFRELAG
>NZ_CP012159.1|WP_050428894.1|639803_641174_-|class-I-SAM-dependent-methyltransferase
MAAEQEGPDASGPALAGDARRVAARVLERVWEESAFASAALDAELSRLTVLDGRDAGLATELVYGVLRTQAFLEEQIDKLAVSRRWAGDPAVRAHLLMGAYSLLFLDRVPAFAAVSEAVNAMRVVADDRVGAFANAVLRRLADEAAKGRPALIDAVVASAPGWLRGALRRAIGRAGASAFLSAGPVPPPLGLCLAPAEDREAWIARLGEAAKGATIEAGKASPHAILVRGAGELRRLPGFGETWIGQEEGAQVVALLLGAKPGERVLDACAGRGNKTWLLSRRVGATGDVEAADLHPNKLRVAATTGARATYAVDWSAGTGRVPEGYDRVLVDAPCSGVGTLRRRPEIGLKREAGDLERLSSLQVAIARSAASRAREGGRLVFAVCSVLREECEGVVERLSSDPGPGEPEVKLVPTPFDAEEALALGLPEGASSVRLLPHVHGTDGYFAAMFTVHH
>NZ_CP012159.1|WP_082362170.1|638639_639737_-|metallophosphoesterase
MARPLSARTLVDVVDAQPRRARLSSYLKRLWPEPGSGRPASPPPSWPGPEELEAGVVQEVGAPTSVNPRAIRLRRFAGPATYLDQLAPLRIAHLTDQHVGRVTPMKVQREAVDLTNQQRPDLVMLTGDFVCHSQLYLDQLEELIRSFDAPVFAVLGNHDHWSGGDEVKRSLQRAGAEVLCNAHTVVTVRHQRLQVVGLDDAYTGHAQRERAVKGLRNDLPSIGLSHIAEEADGLWRHGVPLVLSGHTHAGQVTVARLHELSIGKLAGHKYVHGLYGTRSPAGPQQGAVYVGAGIGASVIPLRLGDRGQREVAVFELGAAPGSFEEHHTEQPALKGRKPSPVVQAKRAEQVVRKREKRERKQRPPS
>NZ_CP012159.1|WP_050428893.1|636740_638588_-|ABC-transporter-ATP-binding-protein
MLGLSRLRGSFAYTPPTLRLVWKSSRASTLALGALTLVAAVLPLAIAFAGKAIVDAVVARDGAATLRWVLVELGLVAALAANQRGLSLIRQLLGARLAMDINGRILEKALSLELPHFEDPEFYDQLTRARREASSRPLSVVTESFGTLQNLITLAGYAALLIGFSPWAVLVLVVAAIPATVAEVRFSNTAFRLRNWRSPESRKLSYLEHVLANDNHAKEVKLLGLGPELLTRYRALGASFYEEDRRLALRRGGWAFGLSLLGTGAFYGCYAVMALTAATGKLTLGELTLYVAAFRQGQQAFQSILSSVGGMYEHNLYMSNLFQYLAIPTTEQRVTASPLATPGQEASSLEPRAVMPSSASVASEERGIRFEGVGFRYPGQTRWALHDVHLFIPAGQSLALVGHNGAGKTTFIKLLTRLYEPTEGRILLDGRDLRTWDMAVLRERIGVVFQDFAQYQFPLRENVGLGSIAHLHDEPRLARALERGGATEVAAIIPGGLDAQLGRWFKGGVELSGGQWQKVALARSFMREEADILVLDEPTAALDAEAEHAVFERFRALSEGRTTIVISHRFPTVRMADRIVVIEGGEVLEEGTHDELLARAGRYAQLFALQAEGYS
>NZ_CP012159.1|WP_050428892.1|636031_636538_+|hypothetical-protein
MSSPAVEREWWKGPTWEIQIFYPAPGVLYTRAEGQADLECAQHAMQAFDRVAAATTEKVAVFHDWEGITAYTAEVRSTYTKWSKGHVERLAGVHILIRSRMVAMAVTLVSAAVGGVITAHYDRNAFEKLRAETILRRRRASENPPDDGGPPTSGPYSIRRGWMTNNGQ
>NZ_CP012159.1|WP_050435665.1|649373_649949_-|peptide-deformylase
MTLLKIAQIGHPILRQRAREVTQEELASEATQRFIDDLIATMRDANGAGLAATQVHEPVRIVAVEVENNPRYPYKPKIPLTVVVNPVIEKLTEETFENYEGCLSVPNLRGVVERHVEIRLTGWDREGKPIDRLYRGLSAGTFQHETDHLDGVLFVDRVKDPRTLCTWAEFDRYHKQAFVERIVPFVRRTEG
>NZ_CP012159.1|WP_050428901.1|650155_651370_+|hypothetical-protein
MGAAIPPPSRRLTPSRLLRTLFVASLTLAGAALVPRAVCGRRAEALWQGDLEAQRAFAVEVASEVRKEVGPSSFSTGSARFDGEWALVTHQMTALGLGQVILAHPEHPELRNAYLPVIRRCAERLLAPASRAFGTEAWGEDGLHQVDSAKGHAYLGYANLALSMLSQLDPEHPFAAINDLLTEAFARRIAAAPHALLDTYPGEAYPADMAAVMGSIGLHDRARGKGRHRAALREATHRLTTQFLDPSSGLFHQRVDARSGKPVGPPRASGTAIAAYFLSFADAAVGRQLFAGMAARQRASFLGFGGVREYAAGEVGLGDIDSGPVLFGVSVSATGFALAGARLAGEHAMFVEIYRTADLFGIELHGAAGGRRFLSGGPLGNAILFAMTTAGPPALLDPPEGRAP
>NZ_CP012159.1|WP_050428902.1|651398_651686_+|hypothetical-protein
MSTRRSWPHQVLLAAVLLTALYVTLLYVLDAVGLMESLLAPSGLRALLVLPLALGLLAARLLLLFVMPGLVVAALLTLLLQRRARGAHRTPRSTS
>NZ_CP012159.1|WP_050428903.1|651869_652328_+|hypothetical-protein
MNTPFAYLLVLAAAPLSLGCSNTTSSDPPTTPTTVEPPAPLADGTPTTAEPTAPPAETPPGDPPTDEPKKPGADEGRLAFTTCTPESRQAKGCTREYRPVCGHVDTRIRCVRAPCPSVAPTTFPNACTACADAKTTGYFPMACEDMQKPSAP
>NZ_CP012159.1|WP_050428904.1|652396_653506_-|UDP-N-acetylmuramate-dehydrogenase
MTLTVQEEAPLAPLTTLGVGGPARWLIEADDEGGLREALGFARSRGAVLHVLGGGSNLLVADRGIDGVVLRARLRGITVTRTGAGRDARVLVRVGGGEPWDALVERATQEGWAGIECLSGIPGEVGATPIQNVGAYGQEVAETIVAVEALDRGSGEAVTLSAAQCRFGYRDSAFKREVRGRYLVTAVTFALTPGGAAAVRYPELRRALGETAASPPLAEVRAVVLRLRRSKSMVLDPADENGRSAGSFFMNPTLAAASFAAVRARVEAAGVLSAGESMPTFPGGEGRVKVPAAWLIERAGFAKGTTSGRAGISTKHALALVNRGGATAEELVALAVRIRGEVRARFGVALLPEPDAWGFTAEELAALSG
>NZ_CP012159.1|WP_050428905.1|653647_657556_-|hypothetical-protein
MAPALVALLSGASSVACTPPAVAPSTGGSVLSDGFAAAMEAEARSSVEVGPYLELLDRAAAAPQMEDALAATLAAIDALTVGASPTVDTSPGGAVFRSMETLPTVVSRLGHAWALAGKHGKGAPAMPFMRGAIAGALHRIALFVGDEQAAMTWGSRRGCAQDAAVVGPLDWTSLRGLEGRSPVGTLAEPLDGSYPGVAPFAEKVAPLRVRADMCEIDTNAVSFLQGTRAAVVDLYVPAPQRIALALTSSSAAVVDVGGVTALRRGYEAGGLPVTRMASLHVEGGWVRVVVRVAQKNDGGGIELGAWDAQGTPLRTRAPAPGQVAGARASKAQAIEVGPPAGADDPKLALRVAALLGVGEARQAEHLLEARLEVSAGASKDAPPDPRLDLLYARSLPIAGDLPDVKVAERLSSVSTRLGKAWPWSWEARLLAAELADRRLGEGEGVIEALDRLGVTAQAEGPTKDALPLVADVDRVVLARAAMMAQRAGMPDASEMAYKRLTAIAKGSAVLANVDDALHGRVGGDAVKVRCSGAGRDRSDRACLDALREAQAYDRALTELSRLRRLRRAPHALQNVELGIQVARGDLKAALKVHDAMPPAERRLLDALGVAAGRNDGGAVRGRLARDRSTARDAPHAVGVLQRALGLSPDVAPALEAEGRKLVLADQKAPAVPGAATLVLRHLERFEIATDGLLHYVAYDLRRVSGTTDVAMGAGAYGPLIEGRGNPRLLRRRIHKKDGRILTPDAAAFAAQAHSDLSQLEQGDYVEQILEGYTLPSDTGQLVIDTTDLMPDRTSVREAEFEVRRPASVDLQQWAHPLLGEPEERTEKDVAVTVWRVKDLAPRRIEDGVPRMEQGVGISIGTQTWANVGRAIGENLRSLEDRDPYVARWAAEAAGADKTPSPALVERVVAAVGKAVKVADSAELSDIAAIYGGGSQRTTARTILELGHGSRSWVIFRALRELGVKAELAIAEMEPFSASSEFPAHVGRFRHPLVIAHLGGKAGDVWIDADVEGPPLPPGRVSPELRGRAAMFSDGRMVTVQAAGADANDEVDLRLVVDARGDARGHFTILLRGRAAQSLSEAFETVVGTDRREMLRDVVLGWVPWADVEDVTVSSRQGSWEVALRAEVAIHGFARPEGRGGTTWTLPGIEPVHFSFPRGFAGTLGATYASRGARQSALSIDTTLQYHVRRRIELPEGMEVSRAPAEVAVDDARLAARRKGTYGAVIEEDFSMSLPTGTVPAGEYQAFVGRVQAIDSGFMAGIRVVSRGGAAETAKAPAKAGASATPAPKTPTSPGATRPKGAR
>NZ_CP012159.1|WP_050428906.1|657732_661098_-|hypothetical-protein
MPRARPPEILPPLFLLVLGAWVGSGCGGGAYDAATAAMAPEPSAFTGASMESAPAAPSMEAKQEEAPRDDAAGGKKDKPAETWKRSRLRAHAARIKIGDTEEIPVRTFQAQVTVDGTLARVVLDLVVHNDRGPTYEGNFQLRLPEGASPYYFAFGESTLQVAGDPQPVLFSREQTLAMGADPGRIFADRERVWQGVKEARVVPREVAALAYGDTVRRAVDPALVEWAGPSIFNARVFPLTGRRSHRIVVGYDVPLTSIGGDLQYTFDLPERVERTVVDVTVTPPAGARVEATTPATDAANAPVTGGALAVAGAPAVAGAPAAGASAAGAPAVGTPAVAGTPAVAAGAAAASPGRRTFHYESPTGAEIALRIRNPKPAHLVATDDATGAYFTAEVMPEPSALGVPGAAGTTGIASAAGAPGAAGTASAGAAVKGGRDTAAALFLVDTSLSSNPDRFNVWLGLLEAILANNRDTLQQFNVAFFDIEQRFFQPRFLKNDASAVQSLRAYAEQLALEGATDLGGALRAAMAPPGKNEAGAPTRWDVFLLSDGAATWGDADTRAMAHRLDGSPVRAVYAYQTGLPGTDTDALSLLARETGGALFSVTGDAEVRAASVAHRARPLRLLDVRVAGASDVLLGGRPRFVFPGQRLRVAGRGVPAKGAALELSVESDGVSRVVRAPLGDAIPSPIATRAYGLVAVSQLEELSPATERSARPYATHFRVPGKTCSLLMLESEADYARFGIQPADDARVVRSSAVSRLVADALRQEEGTRGDPKRAFLQWLERLPKVVPNLTLSFPASFRAALEKMPVSSFSVSAPPLVVKARERSKLAEDVQRMLARHELSYDWIAYDAGERFKTFGAGDALKSWSSLVEENPGDAVLARDVGTSAMTMGLVADAYHLFRRVSVTRPHEPQTYHAMARSLARHGMNDLAMAWFEVGLAGSWDDRFGDFRQILALDYLDLLRRIATNQAKSSVPEFARERFAGVRSLVGVERADVVVTITWNTDATDVDLHVIEPSGEECFYGHRKTKSGGQLTRDVTQGYGPEMYVLPRAPEGRYLIRAKYFASDRNRASARTKVHATVIEDFGKPEERRTERLISLETGKEMHELLQLTRTDRKPAAVAR
>NZ_CP012159.1|WP_050428907.1|661919_662603_+|AAA-family-ATPase
MIIALTGQKGGIGKSTTAVSLAVAAMERGRKVLVVDADPQGTIRTWGEVACEAGHPSPTIVAMGAAMHRPGQLLAVAPAYDVVLIDCPPRQGDVARSALMVADLAVFPCGPTAADAWALTAAVEVFEEARAVREELLGCVLITRKQGRTALGKGARSVLETTGLPVLQTELGYRIAYQEALAMGQGVSSYAPRDAAAREIVQLFDELEMLCHGQEARQGVAAQAAVA
>NZ_CP012159.1|WP_050428908.1|662553_663582_+|hypothetical-protein
MAKKHVKVSLRKPPSPEKLDAFVAASAETQSATPSPQRSRRAHVAPAVTARMAPTASVAASDGAPAVAVEGASVEKVHVEATSVETASVETASVEATSVETASVETASVETATAVDEKARVAASTAAPGASTAEAAATTAMTHETSERVDASAAAEVKASVEAPAVSEASSARSEAAVSPDPSATTSEGAPTKEGDGGATAETAAGSAEPSRAGGAPDPVTPSPEPPVVDATGRTLMPVTVYLPQPLAERLAMHCIAQDRDMSNVIGEALEQHLSRRLGAGSWSSGFHAADDKTSDARGAGSSRWEDPRRWAESFRYGSRMEQVLQVGRVLVGLWQKRPWAA
>NZ_CP012159.1|WP_156338075.1|663982_664345_+|hypothetical-protein
MKSFSVQLRFGMLAVSVLALVAGCGGDDGSDGSPDPDVLVECPPDSDAQQSRGASVIANQCVTCHSTAGGSQGGLDFNNATTVKANAEKMMSEVESGAMPPGATVEKSSVDDLRVYLSCL

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Crispr_ID: NZ_CP012159_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012159_3

1401360-1401464

Orphan

Consensus_repeat	Method
AGCGGCGAGGTGGTGTCGCGCGCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP012159_3

>merge|NZ_CP012159|3|1401360-1401464|CRISPRCasFinder
AGCGGCGAGGTGGTGTCGCGCGCATCGAGCGGCGAGGAGGTGGTGTCGAGCGCACCCGAGGTGATCGGGTCGAGCGCATCGAGCGGCGAGGTGGTGTCGAGCGCA

>NZ_CP012159|3|3|1401360-1401464|CRISPRCasFinder
AGCGGCGAGGTGGTGTCGCGCGCA	TCGAGCGGCGAGGAGGTGGTGTCGAGCGCACCCGAGGTGATCGGGTCGAGCGCATCG
AGCGGCGAGGTGGTGTCGAGCGCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012159.1\|WP_050429399.1\|1414906_1416742_-\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP012159.1\|WP_050429383.1\|1383036_1383579_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050429385.1\|1391381_1392773_+\|serine-hydrolase	unknown	unknown	gnl\|CDD\|224594
NZ_CP012159.1\|WP_050429396.1\|1410352_1412296_+\|RNB-domain-containing-ribonuclease	unknown	unknown	gnl\|CDD\|273947
NZ_CP012159.1\|WP_050429386.1\|1392815_1393781_+\|methyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|181382
NZ_CP012159.1\|WP_082362257.1\|1381671_1383030_+\|DUF898-family-protein	unknown	unknown	gnl\|CDD\|368695
NZ_CP012159.1\|WP_050429388.1\|1395432_1396596_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|273776
NZ_CP012159.1\|WP_050429394.1\|1408022_1408793_+\|NRDE-family-protein	unknown	unknown	gnl\|CDD\|377554
NZ_CP012159.1\|WP_050429387.1\|1393780_1395184_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379207
NZ_CP012159.1\|WP_050429389.1\|1396592_1399697_+\|efflux-RND-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|223911
NZ_CP012159.1\|WP_156338226.1\|1406611_1407484_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050429384.1\|1383575_1389518_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_082363397.1\|1412663_1414799_+\|cyclic-nucleotide-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|237999
NZ_CP012159.1\|WP_050429400.1\|1416966_1417830_-\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP012159.1\|WP_050429397.1\|1412292_1412538_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050429393.1\|1407500_1407932_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050429391.1\|1405349_1406606_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|379114
NZ_CP012159.1\|WP_082362256.1\|1380337_1381141_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|234637
NZ_CP012159.1\|WP_050435722.1\|1389514_1391224_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|372641
NZ_CP012159.1\|WP_050429395.1\|1409421_1410300_+\|aminoglycoside-phosphotransferase-family-protein	unknown	unknown	gnl\|CDD\|366736

Protein	Function_ID	Function_description	E-value
NZ_CP012159.1\|WP_050429399.1\|1414906_1416742_-\|serine/threonine-protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	4.74702e-77
NZ_CP012159.1\|WP_050429385.1\|1391381_1392773_+\|serine-hydrolase	gnl\|CDD\|224594	COG1680, AmpC, Beta-lactamase class C and other penicillin binding proteins [Defense mechanisms].	8.91606e-32
NZ_CP012159.1\|WP_050429386.1\|1392815_1393781_+\|methyltransferase-domain-containing-protein	gnl\|CDD\|181382	PRK08317, PRK08317, hypothetical protein; Provisional.	3.82857e-24
NZ_CP012159.1\|WP_082362257.1\|1381671_1383030_+\|DUF898-family-protein	gnl\|CDD\|368695	pfam05987, DUF898, Bacterial protein of unknown function (DUF898). This family consists of several bacterial proteins of unknown function. Some of the family members are described as putative membrane proteins.	4.894e-20
NZ_CP012159.1\|WP_050429388.1\|1395432_1396596_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	5.34366e-70
NZ_CP012159.1\|WP_050429394.1\|1408022_1408793_+\|NRDE-family-protein	gnl\|CDD\|377554	pfam05742, TANGO2, Transport and Golgi organisation 2. In eukaryotes this family is predicted to play a role in protein secretion and Golgi organisation. In plants this family includes Solanum habrochaites Cwp, which is involved in water permeability in the cuticles of fruit. Mouse Tango2 has been found to be expressed during early embryogenesis in mice. This protein contains a conserved NRDE motif. This gene has been characterized in Drosophila melanogaster and named as transport and Golgi organisation 2, hence the name Tango2.	2.01141e-28
NZ_CP012159.1\|WP_050429387.1\|1393780_1395184_+\|hypothetical-protein	gnl\|CDD\|379207	pfam13472, Lipase_GDSL_2, GDSL-like Lipase/Acylhydrolase family. This family of presumed lipases and related enzymes are similar to pfam00657.	0.000566584
NZ_CP012159.1\|WP_050429389.1\|1396592_1399697_+\|efflux-RND-transporter-permease-subunit	gnl\|CDD\|223911	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms].	0
NZ_CP012159.1\|WP_050429396.1\|1410352_1412296_+\|RNB-domain-containing-ribonuclease	gnl\|CDD\|273947	TIGR02063, Ribonuclease_R, ribonuclease R. This family consists of an exoribonuclease, ribonuclease R, also called VacB. It is one of the eight exoribonucleases reported in E. coli and is broadly distributed throughout the bacteria. In E. coli, double mutants of this protein and polynucleotide phosphorylase are not viable. Scoring between trusted and noise cutoffs to the model are shorter, divergent forms from the Chlamydiae, and divergent forms from the Campylobacterales (including Helicobacter pylori) and Leptospira interrogans. [Transcription, Degradation of RNA].	1.51023e-142
NZ_CP012159.1\|WP_082363397.1\|1412663_1414799_+\|cyclic-nucleotide-binding-domain-containing-protein	gnl\|CDD\|237999	cd00038, CAP_ED, effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO sensor. In all cases binding of the effector leads to conformational changes and the ability to activate transcription. Cyclic nucleotide-binding domain similar to CAP are also present in cAMP- and cGMP-dependent protein kinases (cAPK and cGPK) and vertebrate cyclic nucleotide-gated ion-channels. Cyclic nucleotide-monophosphate binding domain; proteins that bind cyclic nucleotides (cAMP or cGMP) share a structural domain of about 120 residues; the best studied is the prokaryotic catabolite gene activator, CAP, where such a domain is known to be composed of three alpha-helices and a distinctive eight-stranded, antiparallel beta-barrel structure; three conserved glycine residues are thought to be essential for maintenance of the structural integrity of the beta-barrel; CooA is a homodimeric transcription factor that belongs to CAP family; cAMP- and cGMP-dependent protein kinases (cAPK and cGPK) contain two tandem copies of the cyclic nucleotide-binding domain; cAPK's are composed of two different subunits, a catalytic chain and a regulatory chain, which contains both copies of the domain; cGPK's are single chain enzymes that include the two copies of the domain in their N-terminal section; also found in vertebrate cyclic nucleotide-gated ion-channels.	2.17122e-22
NZ_CP012159.1\|WP_050429400.1\|1416966_1417830_-\|serine/threonine-protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	6.42467e-79
NZ_CP012159.1\|WP_050429391.1\|1405349_1406606_+\|ATP-binding-protein	gnl\|CDD\|379114	pfam13304, AAA_21, AAA domain, putative AbiEii toxin, Type IV TA system. Several members are annotated as being of the abortive phage resistance system, in which case the family would be acting as the toxin for a type IV toxin-antitoxin resistance system.	1.06761e-21
NZ_CP012159.1\|WP_082362256.1\|1380337_1381141_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|234637	PRK00107, gidB, 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG.	6.37485e-28
NZ_CP012159.1\|WP_050435722.1\|1389514_1391224_-\|ATP-binding-protein	gnl\|CDD\|372641	pfam13589, HATPase_c_3, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. This family represents, additionally, the structurally related ATPase domains of histidine kinase, DNA gyrase B and HSP90.	2.00526e-10
NZ_CP012159.1\|WP_050429395.1\|1409421_1410300_+\|aminoglycoside-phosphotransferase-family-protein	gnl\|CDD\|366736	pfam01636, APH, Phosphotransferase enzyme family. This family consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include: aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation. This family also includes homoserine kinase. This family is related to fructosamine kinase pfam03881.	2.43383e-07

>NZ_CP012159.1|WP_050429389.1|1396592_1399697_+|efflux-RND-transporter-permease-subunit
MTLAEISIRRPVLAVVLSILIVLFGLVSLTFLGVREYPAVDPPIVTVTTSYPGASPDVVDTQITEPLEQNINGVAGIRTMSSTSRDGQSQIRVEFDLSVDVEAAANDVRDKVSIARRLLPVDVDPPIIEKADADSSPIVFMTLSSETKDILEVAHVADTLVKERVQTIPGVASVRIFGDRRYAMRLILDADRMAAHQVTPSDVQAALSRENVDLPSGRLEGQSTEVGLKTQARLSSTAEFNRMLIKQQDGRQIVLEDIGRAELSAENLRSGMRSQGIPLVGVAIIPQPNTNAIAIADEFYRRLEQIKQELPPEFTTDIGYDFTTFVRRSIEEVEETLLIAFGLVALIIYLFLRDWRATVIPVIAIPVSIISTFFIMYVLGFSINILTLVGLVLAIGLVCDDAIVVLENIYGKIEQGVPPLRAAIDGSKEIYFAVISTTITLAAVFLPIVFLQGLTGRLFREFGLVVAGSVLVSAFVALSLSPMMCRFLLKRHEKPSFFYRITEPLFVGMTRGYAIALGAFMRVRWVAPIAMVGILAATVFWFRKLPSELAPLEDRSNIRVNVRAPEGATYEYTEEALSRVAQYVDDNLPEVRRNFSIVGTQGGPPNTGTQNLYLYEPFERSRTQAEIFQQITRDLGPFGALRVFPAQPPTIGSRFAGQPLQYVIRAPSLEAMVEVLPTFLEEAQRRPELRFVDADLKVNRPEANIRVDRARAAELGIPVLDVARALQLTFGDQRFGYFIMNGKQYQVIGQLDRDDRNEPEDLRRLFVRGAGGQMIPLDSLVTWEEQAAPAAIYRFDRFVSATISGSTATDYTLGDGIRVMDDIAAKVLPQNFSTSLAGEAREFADSSSSLSFAFGVALLLIYLVLAAQFESFIDPFIILLAVPMSLSGAVGSLALTGSSLNIFSQIGIIMLIGLVTKNGILIVEFANQRKEQGLTVREAVLEAAASRFRPILMTSLATILGVAPIALSLGAAAGSRQSLGIAVMGGLLVGTLLTLFLLPALYSFISREHRPAEDEEAHPSAASPERLHEPPAAA
>NZ_CP012159.1|WP_050429388.1|1395432_1396596_+|efflux-RND-transporter-periplasmic-adaptor-subunit
MAVSSQASPPARPVSARARKIAFASLAVAGIVGAIALVRLQSAPSSESRPPERGGASAGAAPTGAPSQKPVAGPSSQAPLLVDVHVAKPEPLELTVPATGSLIAHESVDLVSELSRRLIKVQAKEGQPVKKGDVLFQLDTADLNAQVKRLDVQKRLAKLTLERSDKLQAENLVTRQEWEQARAQYDQAEAERAILGVTLAQSTIRAPFSGTLGLRRVSEGAWVTPQIVLATLQDTSRLKIDFTVPERFTTAIKQGQKFTFTVEGHGERMSGTIVAIEPQIVASSRSVLARGLVENHAGLLPGTFARVEVPLSADDALLVPSIAVIPSVKGRSVYVVREGKAQLVDVKTGARTPDRVQILTGITAGDQVIVTNLLRLRDGAPVKVNTP
>NZ_CP012159.1|WP_050429387.1|1393780_1395184_+|hypothetical-protein
MRRPVHLTLALPLLTLLLPACMPGPILPLPHDPPAPAPRHTRPPPPDGAVSTSAEDPAITRAHRVDRLIEASIRATHAHHALLVRKAGQGDPLCYGLEGRTDDELQALVAHQRALFALDPSALRAWAEGRPGSADPTPHLDALLAAGIEPSLSTPVELSTSYLRRRATAPEGTPRAIANLFQIILELDRDGDILQQAFDAYIALGVPVYVGQLGMKGSDADFLAMGEALAPKTCASPFATDPAAWQIAARKLWNWGEKKLHVRDAAVVATELSREPAVQALLPALKALPARKLAVLGHSFTLELHWSTPGSFVQIAGAILAEQSPQVTLLQTAAGGLGAAKAEKKYLADLLATKPDSALLVLLTRSDDDYAALARIGKALREAKIDAYVFDDVMDGSSRENSAVARKAADIARKEGMHVIEVRKLLESAPDRDAFLCLDGIHMTEPYHRLMAREWLRLLAGARRPAL
>NZ_CP012159.1|WP_050429386.1|1392815_1393781_+|methyltransferase-domain-containing-protein
MTERADTPAASPAPASATADEYAWLVGFEGDWRDTWWNRDFLDLMARRLDLGAVHAALDVGCGVGHWGRTLLPFLHPEATLVGIDQEASFVTQASAQAEAHALASRTSYRVAQAEALPLPDASVDFATCQTVLMHVADPLRVIREMRRVLRPGGRLLVVEPNNFAEKAAMLVAAPGLSRAERLALLTLEATCEDGKRALGRGDSSVGEHLPTLFQEAGLVGIQVHQSDKCAALLPPYEAPEQREELRQMLTWIDGGVWLGAGGTRDETQALFLAGGGDPADFDALWTLALREAQAFREAAIARTLSGARGITCYLVSGRAP
>NZ_CP012159.1|WP_050429385.1|1391381_1392773_+|serine-hydrolase
MNAPATRRRAFSSTRLGASNTRLGAAIMRLGAAVVLLAACAAPPVASRKTSPAEPPPPAQGATVDARVPTSTSPPLPSSAPSSLPQGDPAAEGLDPTRLADLVARAEATSSDALVILRNGKLVGAWTFGEPRSPIELMSVTKSIVSLAIGLLIDEGKIASVDAPVHHFFPEWNQGQKKDITVRHLLEHTSGLQHEPSTNVIYASPDFVRQALAAELTHPPGTRWSYNNKAVNLLAGVVHVASGEKLDDYLKRKLFLPLGIQESSWERDRAGNPHGMSGLGLHAVDLARIGQLLLDGGVWNGKRVLSEGWIDTSTAWARERGESGMLWWPVLDWMKFSIDGELVAQWRKAKIDGALLRKLIPLQDRTFDSRRAFEEALSGALGPEGVSALQASTSKAGLRTKKVQLGPTIGYAGDGWLGQFLVVLPAAKLVAVRQRRYPASEAEVNDPDRRFPDFIEKVRALPR
>NZ_CP012159.1|WP_050435722.1|1389514_1391224_-|ATP-binding-protein
MGDMVRQFADPYAFLRELVQNSLDAGAHRVDVRVGRVADGVTSTAVLDDGQGMTRETIEGPLLTLFASSKEGVEGKIGKYGVGFISVLAIGPEAVEVETWRDGRAFRLVLRPDTTFELEDAGPREGSGTRVILLQRMDASAFTRHAALVGEALRRWCRHADRPITLSVVEGEGTARMERVEVPFAVTAAAFVTVTEGDLRVVVGPSAGARYLGAARRREPEAGAERFAGFYNRGLTLFETSEEVLPGLDGLRFKAMDPRFQHTLSRDDVRRDRTFREALRCAREASRGPLQRVLAAQLWPAAEAAAAGREVGAYMALVEAALTAPTRIDAAQIPFPLACTVRGRSIAADLTSWGSWRAPLLVTNEADALSTALAAAGTPVVRVVHPDLRPLLERCYPRRRVTTAQENHLLVIPETEAMGGADAALTGALGEALALAAHAVAAVHFCRVEGALAQRAALLLPPEGAQKGEAIPETSSAPRLSTANDVERRGVRFRSRDTLYLNVGASTVSLARAAAEVDPITTAALLARALILEARGPLGGGDADRLLDLSGLGSNERGARRRASTKERP
>NZ_CP012159.1|WP_050429384.1|1383575_1389518_-|hypothetical-protein
MSRVVARGALRVDARRAVAKLREHLLVDLHLYLLELVRAAVAGGATHIALQSDADDVIVNFDGRPLDRTTLVRLLDHVLDAPRDREGRRVRLLALGVNAALGLGLARVDVFIPLGPGRCVRARFTPATVEAGAEEAAARPEHAEVTAPPGMPAEGMRVELRRRMGWDVVRRAVAGGRPPEIEMLAAATADLAIPITLDGAPLARVEVPAPLVRVPFRLHGTTRGALEISSVPAGAGAPGRGAGAPGQQEEASERGPVLDLLEHGVRLLRGGWSFGDRFPSTPHAGLTLPVRILVDAEALPTNASRSALREDAPLRALIAEAAYASFVEALHALTARVCGRGEVPEGVVVLSDDARALEEALAACASVGSARVSSDAAWPEEVRALLELPLLRDGLGRGLAPASLPDTVYVWRSSAPVPEVASPWADEIVWVRGKIDASFLQRLPHRDAAKLVEQAQRGEERRRALYAHAPGAVEVPHGPGQLARSTFDVQEGPHLGLCGEVVIRALDAMPSAASAAGAQAHRGQPLSPAAASIRVFYEGRVLDIIALDRAAVPLPFDAALAWPGRLRPQLGYEGVERDRHLHAAVDQAVRIALVMVDREAQRLFGSGSSQAKQACDEKEARGRLGPVIRCATGTLLAAQAGASPLGERPPTDPGHALRGETDLDGLLGLQQARVWPTTQPERGESLETLSLLARLHPALHVAPAGATGRAADGRPVLTLRVEERAWLEAMFPGSAFIPYGEALVDAEGLLQRQRQRQRVLSSALARLAPGTQSDAQPVLVWTRPWAMAMATLADAHVEMWHHALRPLDTVKPKPSLAPIAIAIDSDEVVPDRAWQKVLAGRSTLTTQRVELDLCEALIALVEGADGAAERLGLTPSPPTHGAISSRIVVHLLLSACALAQRASLPDARSGEGALLARIRKLPLLSLLGADGLPKPASLEDAETAHPAPHAVPLLSSEPGFETFAWQPLLVRDARERKALIAWFQGRAAQITPSQLAELRAISERERTRRAFLAGSEHDPESLGDLGDSPRGPLLPITALLHAGQPAAPFDASRQTLPLEESARIAVIAGLPRETLPIERAWVDVLFSRRALCRRALPLAVPVVARVNVDDLAHVDDFTDLSAAGLAAVSKRVHEAALTLAHQLLVDVQKPGNDVRPLRDPRVCNLLAALLEAKLGATKLSAAIRSSTMRWPTVQGTCALLVSLRSDGRDLYFGSRLHLPWRKGARSSDLDSPILHLSEDPDGAGRRRLLEALGFALRDVTHAVATLQARRATSGVKDEAPRLPGVPPHPLLRRTLGELDIKEADGEVEVLDGTTSEVQLVGLDGTMRRVPAKLAMPLQLVVRVDHAHPTIEHTASLLQRIARAMSRHLLAHAAMPDELPSFVRAHLRRAVCTTFSENKTVLDDGRRAPLFEDTQGAWRSLLDLSAPGATWACTHAPPPYPRRVYDPPVLCLSLQEQEQLRARITLHDATPIVARDLAGERRLAAPPLARVALDPAERARCFAVVPFSGGAGMSGEIGLLIPSLEGAGHPRGVAVHIGGRPLCRLDDRPGWPLLAAVNDDGLSPNRYFDAPRTTAAGDRLLKQVRTQVRAWLHAQAPAPTEVLASRWVEAAHPSGRPLVMGRIWLPAVWPIQPYVRFSHPTPDGMRSGHGPLSVTAVHRDLSGALPIGGTLLLGTAAPSDEIARVVLRAAAALLVELAAARPEDPVVATYQWNLRLLGVEDASPVPIRAADGQTIEAPRLIEELRSRGAVWITRGEGSTEGHFPEGAPGFVLRDGSPLAHVLQHRGHALVRELGGLGLIAAEGSTMGARERAVAASLETSNISSLQETSSSVQLSAQPQPPEIVQAPPHASTWFVELWHSIREVLDRGPSTPEAQGESALATAVHEVLAWLRLTGDPVAYVDEVRSGRPVRYDPKSRWVLINPHHDTLRWARGRSPRDPQLVALLSAAAVGEINRALQAVTDAEERRALDEMLRSIGSGSA
>NZ_CP012159.1|WP_050429383.1|1383036_1383579_-|hypothetical-protein
MNDQPGPWHEDELLRLRRELREADMLIVSLQRENAALGGTPASDPENGGSSRWAANGGTKRDGTRDDRGGPVYRSADPCSHAEAALVEARAMVVDLRIENTILRSRAQSRFPRRALGIAVASTTGAILLVGLLWLLSRNAGLVLFGMVVMALGVAIVHFIDTIEPRDGGPPPGPPLIPGG
>NZ_CP012159.1|WP_082362257.1|1381671_1383030_+|DUF898-family-protein
MNAGGYGGGQPPGGYPPGGGGYGPPPGGGYPQQGGYGPPGGGFPQQDAHGQPPQQGAYAHPPAQGGHGLPQGGYGAPPQPQGGYGAPPQPQGGYGAPPQQGGYGAPPQPQGGYGAPPQQGGYGAPPQPQGGYGAPPPAGWGQPQQPPGHGFDPAQGGGYGAPPGAFVQQGYGPPADVNAGSEVRMAFEGQGGEFFGKVIGGYLLTLITFGIYAPWFICSLTNYIYEKSNIQTSRGPLRVSFRGEGGSLFGVLIVSYLLTAITFGIYAPWAICKVARYFNDNTFAQTADGRTYQLRFTGEGGDLFGTWIVNVLLMGVTFYIYTPWALCKIRKWFYERMQIVENGQPVGKLDFVGEGGTLFGTFIGGVLLTMITFGIYGSWFKVTMQKFWNQNTRISLYNRTYALDFVGQGADLFVINLVTSLLVFVTLGIYYFWGQVKKWKWEYQNTLVRALN
>NZ_CP012159.1|WP_082362256.1|1380337_1381141_-|class-I-SAM-dependent-methyltransferase
MTSTVSPALEQRIARVLSAGVGLRGDGESPASLKTDGVAGGTELIEPGGGAAGEGAEGGRGAEGVSTWIGLVAAWNARIDLTAARNEDELVDLMLADAVVLAAHLPQGKRVVDVGTGAGAPGLAVALLRQDLALTLVEPLQKRVSFLRNTIGALLQSGALKPGAGRAPFVERGRGEEVARRAPAFDVAISRATLAPGRWLDMGAALTAGAAAPEVWVLLAREEPPALTGWEVAEDLRYRWPLTGVERRAVRYLRRAPASTPGATSEG
>NZ_CP012159.1|WP_050429391.1|1405349_1406606_+|ATP-binding-protein
MLTLIEAINFRCLRYVRQPLEPFHVLVGPNASGKTTFLDVVAFLGRLVSRGPEAAVEERTGNFHDLTWNRSQEQFELAIEARIPETRREKIEESFDALRYEVVCGVDPKTQEFGIIAESLHLRGSSEDPRQGLLRFPRNLEPPSSLMTKKGVKNIRRVIAKVPGGNDNFYSESHKEKGKGWFPSIKLGHRRSALGNLPHDEEAFPVATWFSELLTQGVQSITLNSLLIRKASPPGHTRGFRPDGSNLPWVIADLEKKHPEQFAKWIAHLRTALPNLEGIRTVEREDDRHRYLMLRYRGGLEVPSWVASDGTLRLLALTLPAYLSDLRGVYLIEEPENGIHPSAVETVYQSLSSVYDAQILLATHSPVILSLARASDVLCFAKTEEGATDIVRGSEHPALREWKGTPNLGLLLGSGVLG
>NZ_CP012159.1|WP_156338226.1|1406611_1407484_+|hypothetical-protein
MAYEKDLVVLLPNKDAQFLLRGILSRMPEMGMRTPSVQFDTHPLRDAGCLDGDELLESQASRYEKALIFVADRTKSGREEMTREDLEARIEEGLNRTGWGSRGRAIVVDPGIDRWLLEHQLGETWSPMEGALSTALDIALRRRRLPRSSNLYEPLGERLVHEGLIDPAWRKLVAILRQWFRTEAQPLEKESSEVELRVRFDALVQKWLSETAHLSSLDAIVQHGAYREIIGMGPRVIPLILRDLEQEPKHWGTALRELTGENPIPPEHAGRVRLMAEDWVRWAKERGYDR
>NZ_CP012159.1|WP_050429393.1|1407500_1407932_+|hypothetical-protein
MLEVVFPDLSGWDYEVTSEITFDYNCIAFAAGDESSWWWPTHPEGYWPPEAPRECTLEAFIKAYETLGYHPCDDDSHDPAFDKVALYADEKGTPTHAALQIDGLYWKSKLGKLHDIKHPLNALVGSSYGRVVAFLRRARPTNL
>NZ_CP012159.1|WP_050429394.1|1408022_1408793_+|NRDE-family-protein
MCTLIAAVGQWPELPLVVAANRDEFLARPARPPFLWPGSPRVVSPRDELAGGTWLGLSEYGVFVAVTNRAGSPPDPARRSRGALVVEALTASSARSLHQRLQPLEATTHNPFHLFYADRADAFITWSDGHAVHHEVLAKGLHVITERSFDAGDLGREATIRAYWAEHVAGRAFDVDALRGLLTIHGVDPRAGTCVHLDEFGYGSRSACILKLGAAGVASSLLWAEGRPCQKPFLSQEELLLALGEGTRREATASER
>NZ_CP012159.1|WP_050429395.1|1409421_1410300_+|aminoglycoside-phosphotransferase-family-protein
MSEPTLDELRQVIVDAFPELASSRFTLLTMGWQSLAVDVDDRLIFKFPRDEEAEKALISEAGVLAVVRPALTMTVPDLTLHQGTRLFSRHDKLRGEHLLAPEYERLGERSRQVLAEELALFYAEMHALPEAALKAAGAGPAEAWMEPDEILEKAWPRLPPALRPYAEQTLAVWRDLPPDPHGTTFGFFDGHGWNMAFDHERERLQGIYDFADAGFGVLHREFLQSDWIARDLTARIIPAYERLTGRAIDRARVALMSGVLRLWELADLAAEDTPRIEAAVRIVEVWAASERA
>NZ_CP012159.1|WP_050429396.1|1410352_1412296_+|RNB-domain-containing-ribonuclease
MSSRVRGRIQIHPRGFGFLKPEPSGDPAGEERPAAFVTPPDLNHFLEGDLVSATLVESEPGRFTATQLALVEHARAELLGTIVFHGGRPHLRTDRDLANTDWPFRHGEGAGLAEGACVVARVEGKELRLEREVVHEADQGLERCIVRHGLRGAFPEEVAACAEAMAKETLAALDAGAETASWPSAFGHRRDLRSIPTVTIDAASTRDIDDALAVLPAGPDGALRVLVSIADVDQFVPEGSVLDVDARERATSVYLAGRVLPMLPECLSSHAASLVEGADRLALTAELRIDPEGLVTSVDLYESVIRSTARLTYDAVAELLATGASADVPAEVVSTLRWLRTAAARLSAVRAARGGVSLHREEAYIALDEATRSPTAISGRTDTEAHRLVERLMVAANEAVAGWLVARGLPGIYRVHDEPTAERVLALGSYAHNFGIEAGFGPRLTLRGLAAFEAQFAGAAIAPAIRNVLGKALGPARYTALPGLHFGLGAPLYLHFTSPIRRYADLAVHRVVKHYLRGERGLRAGDERFALLGSHLDARARRASKAEAERHRMLVARYFASRVGEVVEGNIVAIKPFGLVVQMRGTGATGTIALDALPEGPYQPDAAMHALVGPGRRYSIGDPLRAVIASTSEALGRVELQLAREAG
>NZ_CP012159.1|WP_050429397.1|1412292_1412538_+|hypothetical-protein
MTTHCAVCGVELTSGASDGPRLRLLCPSCRSAERPTTEQLAAALPKRKPEKVKKRWRPRTIARALLIVMALLLAVIRLLEK
>NZ_CP012159.1|WP_082363397.1|1412663_1414799_+|cyclic-nucleotide-binding-domain-containing-protein
MDWEDKLARVRQYLRTIEARANPQEESAELLPAVEIIPFEAGKRPLDEALYPGHGCSERSGLLSTAPDAVLQGEDEVWILFRLRDLYAYVAPFQRSFEVTLSAWYLPPPGVDAAPVPVPGLVGVPIAPQVVARDAYPLPALEPSDFAEFHRTLFVASLRPREQLVPAVLPEALRERTPDGADPFTFAHRFQQALRLEITLSEGGERLSSATTEVEIFDTGRFGSLYARLLDELVKADLVAQQEQLRVDDLHVGYHPWFPVLTIGADKANLYLRAIRQDLEMQRRNLPDPRWLLRVGLYLELLTCLGIMEAVRDEYPDLLTPAERAVFEKSPAFAPIRERLRVDDWRKVWELREIAPHRAGSFSSVSVILSNLLRKQRATLGFLHTHHEDLKAALELAGPNLVDAQETWHRVFRDAERAVLRNAEIAFPELRQLDARLREFALWHQRGDMRVLGLTVLPEALTSLFGDQDGIYPSACRQYRRSMNEVAGWAASHGLMDFTGEECIPPNASLLEAQMHQHPKLLDALQRRDGYGRDLEVSAPRAGTSPGSLDEVIGVLRGAKVFGPLMDRELRRLAQRARRAVYGPLDRVVVQGNSDASMFVVASGSVEVLVRLGDGRDAPLATLEAGAIFGEIALLTGEERSATVRAVEEVVLYEITKEALQPIIEARPQLVVELARLMALRQADLREVAGRVHEEEQTRSLAARIRGFFLG
>NZ_CP012159.1|WP_050429399.1|1414906_1416742_-|serine/threonine-protein-kinase
MGAQAAVPQLEGLFNGRYRIRRCLKAGGMGAVYEVLDEVTSGRRALKIMLPTLMASPELRTRFERETRITGSLESDHIVRVYDAGVDDASATPFLVMELLQGEDLGALVRRRGSISAAEVVMLLFQAALALDRAHAAGVVHRDLKPENLFLTERDDGSPCLKILDFGIAKVLGEGTTLTQSMVGTPAYMAPEQVRAERTIGATADVYALAQVGYALLVGETYWREEAEAAGSSYMLAIAVLAGPTEPPVERALRRRGRKLPENFNAWFSKATAARPDARFQRASQAILELGTALDVLLPNAPRERRTGPPLTLGATEYATPEPTHHSEEISVSRLRGATILQERLPPLARQSVSPPASPEPPSPASQRPAPHHEDAHLHGHLTPSGSKRRSNAPGAGNSSHASSPPSASRSGSNAPGAGNSSHASSPPSASRSGSNAPSAGSGNHASNAPGTGSGSSTGSSAPSASSSTGGQRRFRVVADLQHCIVRLKVWGFWDIHEARAYLDDFRAKAALVVNEAARSGASSDGSAGEGRPWYVLADISEFAAQKPEVNAYVEKTMEFARKHGMRRAANLVSSALSKMQIGRLSTDMRLPEYSFFQAESDAVAWLLRGP
>NZ_CP012159.1|WP_050429400.1|1416966_1417830_-|serine/threonine-protein-kinase
MEIFDVGDVVDERYELLDELGAGAHGTVFRARDLTAHGAEVAIKCLHPELAANEGLKARLTREARAMSALAGTSAAEVRAFGSTPQGTLYLVLELLHGRDLEATLRALDTEGRRLTQERLITLFEPIVKTLETAHARGIIHRDLKPANIFVLEDPDQGVVRLLDFGLAKDLAADPLTTKGAIAGSPAYIAPEVWMGRPHELDHRLDVYSLGAVIFRALAGQPPFQAETRIDLIVACMHGPRPSLKARRPDLPAAIDAWVARALATSREARFPDVTSLWAALLDVLRP

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Crispr_ID: NZ_CP012159_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012159_4

1504166-1504260

Orphan

Consensus_repeat	Method
GAGACGGTGGGGGGCTCGAAGGACGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP012159_4

>merge|NZ_CP012159|4|1504166-1504260|CRISPRCasFinder
GAGACGGTGGGGGGCTCGAAGGACGAGAAAGCGCTCGGCCTGATCGTCCTCAGCAAGGCGGGCGAGAGTGAGACGGTGGGGGGCTCGAAGACGAC

>NZ_CP012159|4|4|1504166-1504260|CRISPRCasFinder
GAGACGGTGGGGGGCTCGAAGGACGA	GAAAGCGCTCGGCCTGATCGTCCTCAGCAAGGCGGGCGAGAGT
GAGACGGTGGGGGGCTCGAAGACGAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012159.1\|WP_050429448.1\|1506110_1510235_-\|RHS-repeat-protein	unknown	unknown	gnl\|CDD\|372665
NZ_CP012159.1\|WP_050429443.1\|1497150_1499373_+\|type-VI-secretion-system-tip-protein-VgrG	unknown	unknown	gnl\|CDD\|274542
NZ_CP012159.1\|WP_050429447.1\|1505064_1506099_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|365857
NZ_CP012159.1\|WP_050429441.1\|1494542_1495454_+\|site-specific-DNA-methyltransferase	unknown	unknown	gnl\|CDD\|334588
NZ_CP012159.1\|WP_050429439.1\|1489928_1490753_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050429440.1\|1490866_1493584_+\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	unknown	unknown	gnl\|CDD\|274732
NZ_CP012159.1\|WP_082363400.1\|1493583_1494546_+\|penicillin-insensitive-murein-endopeptidase	unknown	unknown	gnl\|CDD\|367482
NZ_CP012159.1\|WP_063796215.1\|1487209_1488832_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_063796217.1\|1515239_1515608_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050429451.1\|1514067_1515105_-\|DUF2169-domain-containing-protein	unknown	unknown	gnl\|CDD\|370755
NZ_CP012159.1\|WP_050429438.1\|1489058_1489556_+\|HD-domain-containing-protein	unknown	unknown	gnl\|CDD\|182810
NZ_CP012159.1\|WP_050435731.1\|1512967_1514056_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235715
NZ_CP012159.1\|WP_156338238.1\|1496272_1497055_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237030
NZ_CP012159.1\|WP_050429453.1\|1516364_1517054_-\|MgtC/SapB-family-protein	unknown	unknown	gnl\|CDD\|224204
NZ_CP012159.1\|WP_050429446.1\|1504491_1505046_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_082362263.1\|1489527_1489932_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237125
NZ_CP012159.1\|WP_050429449.1\|1510286_1510724_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050429444.1\|1499395_1501651_+\|type-VI-secretion-system-tip-protein-VgrG	unknown	unknown	gnl\|CDD\|274542
NZ_CP012159.1\|WP_156338241.1\|1510822_1512994_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|131323
NZ_CP012159.1\|WP_050429452.1\|1515970_1516300_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|137367

Protein	Function_ID	Function_description	E-value
NZ_CP012159.1\|WP_050429448.1\|1506110_1510235_-\|RHS-repeat-protein	gnl\|CDD\|372665	pfam13665, DUF4150, Domain of unknown function (DUF4150).	9.91416e-25
NZ_CP012159.1\|WP_050429443.1\|1497150_1499373_+\|type-VI-secretion-system-tip-protein-VgrG	gnl\|CDD\|274542	TIGR03361, VI_Rhs_Vgr, type VI secretion system Vgr family protein. Members of this protein family belong to the Rhs element Vgr protein family (see TIGR01646), but furthermore all are found in genomes with type VI secretion loci. However, members of this protein family, although recognizably correlated to type VI secretion according the partial phylogenetic profiling algorithm, are often found far the type VI secretion locus.	1.52461e-173
NZ_CP012159.1\|WP_050429447.1\|1505064_1506099_+\|hypothetical-protein	gnl\|CDD\|365857	pfam00079, Serpin, Serpin (serine protease inhibitor). Structure is a multi-domain fold containing a bundle of helices and a beta sandwich.	0.00191672
NZ_CP012159.1\|WP_050429441.1\|1494542_1495454_+\|site-specific-DNA-methyltransferase	gnl\|CDD\|334588	pfam01555, N6_N4_Mtase, DNA methylase. Members of this family are DNA methylases. The family contains both N-4 cytosine-specific DNA methylases and N-6 Adenine-specific DNA methylases.	1.6251e-34
NZ_CP012159.1\|WP_050429440.1\|1490866_1493584_+\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	gnl\|CDD\|274732	TIGR03703, plsB, glycerol-3-phosphate O-acyltransferase. Members of this protein family are PlsB, glycerol-3-phosphate O-acyltransferase, present in E. coli and numerous related species. In many bacteria, PlsB is not found, and appears to be replaced by a two enzyme system for 1-acyl-glycerol-3-phosphate biosynthesis, the PlsX/Y system. [Fatty acid and phospholipid metabolism, Biosynthesis].	4.31509e-102
NZ_CP012159.1\|WP_082363400.1\|1493583_1494546_+\|penicillin-insensitive-murein-endopeptidase	gnl\|CDD\|367482	pfam03411, Peptidase_M74, Penicillin-insensitive murein endopeptidase.	7.38644e-17
NZ_CP012159.1\|WP_050429453.1\|1516364_1517054_-\|MgtC/SapB-family-protein	gnl\|CDD\|224204	COG1285, SapB, Uncharacterized membrane protein [Function unknown].	1.43111e-43
NZ_CP012159.1\|WP_050429451.1\|1514067_1515105_-\|DUF2169-domain-containing-protein	gnl\|CDD\|370755	pfam09937, DUF2169, Uncharacterized protein conserved in bacteria (DUF2169). This domain, found in various hypothetical prokaryotic proteins, has no known function.	6.36045e-82
NZ_CP012159.1\|WP_050429438.1\|1489058_1489556_+\|HD-domain-containing-protein	gnl\|CDD\|182810	PRK10885, cca, multifunctional CCA addition/repair protein.	3.00193e-06
NZ_CP012159.1\|WP_050435731.1\|1512967_1514056_-\|hypothetical-protein	gnl\|CDD\|235715	PRK06147, PRK06147, 3-oxoacyl-(acyl carrier protein) synthase; Validated.	2.18118e-29
NZ_CP012159.1\|WP_156338238.1\|1496272_1497055_+\|hypothetical-protein	gnl\|CDD\|237030	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.	2.05468e-06
NZ_CP012159.1\|WP_050429452.1\|1515970_1516300_+\|hypothetical-protein	gnl\|CDD\|137367	PRK09541, emrE, EmrE family multidrug efflux SMR transporter.	1.03752e-32
NZ_CP012159.1\|WP_082362263.1\|1489527_1489932_+\|hypothetical-protein	gnl\|CDD\|237125	PRK12519, PRK12519, RNA polymerase sigma factor; Provisional.	8.33861e-08
NZ_CP012159.1\|WP_050429444.1\|1499395_1501651_+\|type-VI-secretion-system-tip-protein-VgrG	gnl\|CDD\|274542	TIGR03361, VI_Rhs_Vgr, type VI secretion system Vgr family protein. Members of this protein family belong to the Rhs element Vgr protein family (see TIGR01646), but furthermore all are found in genomes with type VI secretion loci. However, members of this protein family, although recognizably correlated to type VI secretion according the partial phylogenetic profiling algorithm, are often found far the type VI secretion locus.	3.77031e-143
NZ_CP012159.1\|WP_156338241.1\|1510822_1512994_+\|hypothetical-protein	gnl\|CDD\|131323	TIGR02270, hypothetical_protein_GSU3180, conserved hypothetical protein. Members are found in Myxococcus xanthus (six members), Geobacter sulfurreducens, and Pseudomonas aeruginosa; a short protein homologous to the N-terminal region is found in Mesorhizobium loti. All sequence are from Proteobacteria. The function is unknown. [Hypothetical proteins, Conserved].	3.37509e-09

>NZ_CP012159.1|WP_050429444.1|1499395_1501651_+|type-VI-secretion-system-tip-protein-VgrG
MSDPHVRVLSTLAVEGKSYRVLAYELVEALAEPGFAACEVYDDDAPLPLPEEVIGRRARLTLSRSDGAQERAFDGTIVEAELAPDEDDVPALRLRVEPLLFRPGLRADCRIFQDKSGPDLVKEVLIEAGVPAGRQHWLLVESHPVRPYTVQYRETDLDFIQRILFEEGIYYAVRPGDGGETIAFCDHPDGMGEIAGATTLTFFEDFGFEGGADRVVHVSQTAAVRSDKAYLRDYDPERPSFTVEGKAEGTDEGPHTLEIYEYPARSTDDAEVERRTQVLLESVQAERDVIQGETGSLALAPGLRFTLEGHPYEPLNQELMVTRSRITGTDPSSFQAHVGRKPTYACAFWGVPTKTTRYRPPRRLRSAALPGAQTAVVCGAGGEEIHTDGSAQVKASFHWDRSGQKDENASRWIRTSQLTLGGSMLLPRVGWEVAVRHEGGDPDRPMVMGRMYNALTPPPYALPGGAAKSALQTATSPGGGSANELRMSDTKGAEEMFLGGSRDMSTDVKNNATESVANDHKKTVGGNQTESVTNSLTSAIGANQSIEIGGDQSINIETFHVDEVMGDHTLTIGGNRDLKVGGDHRVSVGGSSTTETGSNHIELVVGAVSHETLASLDHTVGTALVELAVGTRTVNVGGDRSEAIGLAKLIATRSGRGVDVGGSLDVKAVGAVAHVGSADRVEQSGGTFTELAVGAQIVKAGGNVTFEASGLLTLVMGASVLSLTPASVAVLGLSAKLDGEVTDLSIVVIDN
>NZ_CP012159.1|WP_050429443.1|1497150_1499373_+|type-VI-secretion-system-tip-protein-VgrG
MSASNAIFTLEGDALPGDAVAAHFEAHEAISEPYAVTVVFSTRDTSFRAGACLRTRVCLLVTAASGETRFFDGIVDRARFTRVVAEERQFELRLRPALAALEHREGCRIFQEKTIVQVVQTLFEEAGFGAKVTWNIAREYEPREFIVQYNESHLNFVSRLLEDNGIFYFFRQGPDGHTMVLGDDASAFEGDAPVHLGLAQGLDLPGVEPLARFSRTRALRTSDVHLRDHDFQRPAVPPEGQLAGQDVVAMSYFEYPGGFTQGAVGSRLAEVRLRELRRDAETCEGESGATGLSVGAPFTVEGAAEPGLDGEYVVTHLTTRGSQTLVGGEENVALRNEFEGIPRAVAYGPPRRARKPRILGVQTAVVTGSSAQEQALHVDEYGRIKVRFFWDRVGQQDHTASCWLRMAQVALGGSMSLPRVGWEVAVAFLDGDPDRPLALGRVYNVEKSPPYALPGAKTTSALKSMSSPGGGGYNEIKMGDSAGGQGVGVHAQKDLNVIIRNDKVEDVGADEERSIAVNGSRSVKVDDSVQVGGNQRVDVGAVRSQNIGANQDITIGGNDTSNATANFIEKIGGDRAHSVGGNWITICNGLTQSVQGNFTRDVGSLELQGTIGSIQDNVVGSLDETVGAVKIQLVNGSHGEQVSADKQETYMAGKLHLTKGPMEATAGGSVTNLVGGLHYRKLGGDLVVNAPMITLLGAVGSLRAGDSEFKLGGGPVVLSAPKIEVKSALVVKMSASMKLG
>NZ_CP012159.1|WP_156338238.1|1496272_1497055_+|hypothetical-protein
METEALPFKPARASAQSISSKPPPGPAPSPLVPLQKSAADDDDPLARTIVGAGLTAEHILPFLAPRSGSAGAAVGRTSPGDPAAASNAPLPFRQVQPAQTAASSQLKEDPLNKTTVGALAPSGDPLPFQAAASRPAVAEAPPRAPAPNARSATASPRGAVPAPLPAPAPAATPPPPPPRAQGADLDIYQYAALCAELAVFPGAVEATFQRYGLHEPARRAAVDTAWKARLQADARAYATWQEHYRRIHAYWTAQVRQGGR
>NZ_CP012159.1|WP_050429441.1|1494542_1495454_+|site-specific-DNA-methyltransferase
MSNLLAHGDALSVCAALPPDLRFDLVYLDPPYGLGTTMSARSEGGQSRGRKSARSGPSAYDDPSGADALLSMLEPRLAAIRERMATHATLWLHLDHRAVHEAKGLCDRLFGRGACLGEVIWAPGNGSRGARGFAITHQTLLLYARSPKERGLVIYNADDPALREPYAATSLAMHFHHEDEAGRRYRERVINGKAYRYYADEGRRMGSVWTDIPAMVANTPLRREATGYPTQKPEKLLERIIRATSHPGQVVADLMCGSGTSLVAAARLGRRFVGGDRGELAFETTRARLSRESVPVEIVPCPG
>NZ_CP012159.1|WP_082363400.1|1493583_1494546_+|penicillin-insensitive-murein-endopeptidase
MVVSKRGFSWLAPLVCAVSLGAAGLGCASPTPLAPALRGSVGLPHRGVLTDGVELPRKGDGYVLLRSKGARWGHPRLVAAIQRAAAEVERLRPGAPPLTVGDLSAERGGQIRGHRSHRTGRDVDLLFHALTPEGKPIRSPGFVRYGRDGLAEVEEGGKTVFYRLDVERTWLLVRALVESPEAAVQWLFVARWLEALITEYARARGEDPEIVWHAESVLLQPGDSAAHDDHLHLRIACTPEDAVAGCEGGGPQWSWLSPFPVLAPPPDEELGLAMLEDLFPFPNLGSEETALPSASPMTPAPPASPGAGGSAASTRSGAAP
>NZ_CP012159.1|WP_050429440.1|1490866_1493584_+|1-acyl-sn-glycerol-3-phosphate-acyltransferase
MPLRPASLAVRAYDTVFRQIPVDDAWIEAIRALVARGPVVYVLRNVSLVDLLALHAFTRRFGLPSLGFANDLGAWVQAPGLSFRQPTPGERIRQALEAGHSAVLFLKRPPERLLPRPGSVQRGRSEGDAPLRALIALQREARAAGRALDIPLVPQTFLWTQRPGNLRISFTDTLFGPAEFPGELRAAAQVLLNYKHCVVRAGEPLFLGAFLAEQEEAARTAVATAEPQKPRDEDAAERELGEGGVDGVLARRLTYALLRRLERERRSMVGPAQKPADRVREEVLRSPKLQAVIRELAGAGEEGRVLLERKARRTLRSLQADPDPATLRALELLADTLASRVYTGIDVDKEGIERVREAAKKGSLVLLPSHKSHVDYLLMSWVLRKHALQLPVIAAGDNLAFFPLGPLFRRAGAFFIRRSFKGDRLYASVVDAYIRRLLRDGHAIEFFLEGGRSRTGKVLAPKLGLLNMVVEAGLGLENRTISFVPISIGYERMMEEGSFARELSGGVKQKESVGELLKIGGVLQEKYGRANMAFGQILSLDELREAVGLAPGEVASPAKRRALVTRLAHRVMSEINRATLVTPGSLVAMALLCHNRRGLPHAALLAQCARLTTLVQRLGARTTPSLTRPSGEMRELAIRDAVLLYVRGGLVRQHVPGDTLTGKARKRGRIYTGDDVIYTVPQESRILLDLSKNIIVHLLVDRALISVALRAGAVSESGEAWRPPSLSELEERVRWLSRLFKLEFMFRADAPFEQIFEETTRAMMVDGEIAIDADVVRFGVGHDGLDGRGWVGFYAAVLRNFLEGYRIAARATRVLVQESLPEKELVTRALQVGEQMFLGAEIERSEAVSRPVIENALAAFVEQGYLRRDDGKLTLSDAFRAEETVPVIEARIAGYLQRRSGDLGW
>NZ_CP012159.1|WP_050429439.1|1489928_1490753_+|hypothetical-protein
MSAERSGGVRGRITFEAARLMVEEGVDQYFTAKRIAAKRVLGRVEGRRTRYRPADLPSNGEIRDAVLVLSEHAEGSLRTRRLFALRIVALEAMRALAAFSPRLIGSVSTGHVRRGSDIDLHVFPASEEMLERHLRELGWTQERELVSIHKGGEFRDYVHYHVADVAPIELTVYEPRELRSRPRSSTDGKPIVRLSVGAVESLCEREHPEAYQRYLATGAVEGMELLHSAEEAPRPGPFDGLLDEEDDAPALPEPGEEDDPEQLYDPLPGFESIG
>NZ_CP012159.1|WP_082362263.1|1489527_1489932_+|hypothetical-protein
MTCERSRWPEREGRKRELGLPRARREILRADIDRWSDERGLWTQEVEPPGHARLCMAVRDAVATSLTDKQREVVEAYFFEGLSQGDIARRLGITQQVVQKRLFGAPRGGRLIGGAMHRLRQALEGIVEPAHDEP
>NZ_CP012159.1|WP_050429438.1|1489058_1489556_+|HD-domain-containing-protein
MFQDLLDLLRDLDGVRQDPRWHPEGDALFHSLQVFDHARRETSDRVLWLAALVHDVGKAFAGAEHAEEGAELLSPIICPRAVWLVRHHLHLMRDPGATIRRLKGTKALADLRRLRRWDVAGRSPHATVMAPEEALELLFHGHEGDLHAHSDEVAPCDDLRKEPLA
>NZ_CP012159.1|WP_063796215.1|1487209_1488832_-|hypothetical-protein
MKPGAKRTKADEPSPQQKLRMPGSKTGTTSPDEEPDRFAWKGAAVVAALVTGLVVWRTCSPGAEEDTPGASSGPRSAESGDKAALAPPRCAPAGAAFVIDTEKRRVQAEGEEAQDQLAPFAVEVGRGAAFEGGFAVGALQESEAGAMAMVAFVGADGSGGRLVKLARSRGDLEPPSVTSAGRAVIVAMLEPNAGGRAIRVAKVDGDQVTWGAELAEGRDESLALDVAASGERAVVVWDDVTRDGKQSRIMMASLDTATLRSVTSPRPISSPKGDAEAPRLLSRPGGYWLAYVARGEERADDDSRGAGAKPGAKKVGTPARLQRNQEVLDEDTEAPGEMITHQWLEVMPLDETGSPVASARAITPRSGHVLAFDLASGDDGGVLLAYRDDDTPSGSSGGKVSVQFVGLGMVGEAMVVAGDERTAPGSAAQGVGSGVPSLLPGWLTVANISGATRLAALGPRGEILDQLAPEEALGAGEAIAANGGALMLARPAGTAVKLEVLRCARGEKARAAGEGEPSIPASADDVGQPRATDEASPGNP
>NZ_CP012159.1|WP_050429446.1|1504491_1505046_+|hypothetical-protein
MAEHGRADAVTTVGAALEEVESPRASQVSIEELLSDVPLPAEASPPVALVAAPVGVRVARLLQVTGRVASLSLRGEAGPLEADIAPEVEVELVQDALVNGDSVLVEVGPGIAPLVVGVLQTRRPRELHLRAGTVHIEGDNEVVLRSGRGALRIREDGDIEVVGSRISAASRGLFRIVGRLLRLN
>NZ_CP012159.1|WP_050429447.1|1505064_1506099_+|hypothetical-protein
MSSSPSTITALDGRSLVRTQVTARLDEPLSAGSNLLFCSTFQLAWNELRAALGGAIRLQGDPLLAVALEREGPTADDLDVGSYVARGGVGPGFLREVERALRQTFGDRDDFMLPGRLEPSAILAYAYLSKDLAFRTPFEVERKLGIVFHGGERVACFGVWGAQEDPLRAKRAAQVVVHHVSEGGSFVLELITDAEADRLIVACIPREPSLLAMVDEALARANHKPGLWSRLRGEVALGKRDVVKIPMIDVDVLRNYAEIGQRKVLDQEHVIEEAKQRIRFRLDEKGAILRSAGVIVAPRGGPRGRHFVCDRPFLVAMVRAGRRYPYFAAWIEDPELLVAVRPEP
>NZ_CP012159.1|WP_050429448.1|1506110_1510235_-|RHS-repeat-protein
MGKVTAYYLDTITDRSGHTMAGFAVSVCLTPAAPAPLPIPYPTFGNTAEGITDPCMRTKIEGAPILTVGGCMKTCHGNEPGTLREVVSLNITGPCFPWLGAPLILIELGMAGITGSLGQMNKGLTFGLGAKASGASGAGGAGGGPSGPGAGGPGAGGPNGPGNGGGGGGGSNDGAAPPSPPAPPGAEGQASAGHPVDVITGTLFTPPCVDFTLPGFLWVRWIRSYRTSAVRQRCGLGWGWSHNLAWRGERHGETFTLIDDRGSETTLVLPTGDETLLLPHGRKLHAEGDAIVVDLDDGLLRVLRPSPGGTNYALVALRDAHGNHAALRWENEEIVEIVDSVGRRATLTRDGALRTWELHLLDDEGEPQQKLLVAYELDERGDLVQVIDAGGVSTRYEYDEDHYLLAEHRPDGIVFRFVHAEFHGEKRCVETWGERPGGDLLAELGAVTEDAKAKPRGIFHTRLTYGPGRREATVTDGAGSVHRYAGNDLGLVERYIDPRGNATLFRYDALGRVVSMSDGSLGATRRQVDASGRIASITLADGATLRFQHDDETGLRTLIRPDGTRASVRLVRGKVVERLDEQGRKTLATYDARGKNTAITWPDGGQDLLEYDTHGNLAKYTTARGAVYRYAFDFLGQPISLETPTGATYHLDYDSRGDLVALTGPGGQRSAFLPDRMRRTELQQHTGGGEQRNRWVADALVEQTKADGSRYRMGYDALLRLQWIENPAGERFTVRHDGAGNPIRQQTFAGLTYGFEYDGADRLALVLNPEEKRLVERRDAQGRILTREHSGRTSARFAYDEAGRMLSAEAGIARVEYGYDESGRLVREQQAAGGFRFEVRYQYGPDGRIAERSYSSGWHVRYGAEKDGESIAITSSLGNETLHIERDLEGRELLRRRETDGLALRTQRNVLGFPEHVVVEDADGASLRVRSFRWDARGPVAAVTDTAAGMRSYELDVFGRPVSAQGLGTNERFRYSPHGTALPEGATWSLGAGGRPTHVGEVLLRWDRCGRLVERRAPDPQHSWRYGYDDDDRLVEAVRGDGVRVQYLYDAFGRRLAETVGGATTWFGWDGNAPVEEQTSTGGKVLRVFHDDGHTPLVEGSEGQGLRLVAADAAGTPYLYLGNEGETAELDLSTWGEVARTQGDVGALRFAGQRADATTGLHYNRNRYYAPDLHVFLTPDPLGMLGSVQDVGFVPNPTLYIDPLGLLTIITASNDPALINAYYGNYASQYPGATILTPSQVTPGSLAGETEVMIDTHGVPGQIEWAGQDISGTELGDRLNAAGFNGSAPGARVDVIACNSATKPRGGQSVSQAVANRTGATTSGGRALFNSSFLGNQGWSGLVSGMPSGTPPSGLRVNGFGSWVNGIQPQPGTP
>NZ_CP012159.1|WP_050429449.1|1510286_1510724_-|hypothetical-protein
MAPRADLAGDVKAYAALAVALASPSANRAAILSAHGLDEAGWEALDDAWQARIAEEDEEDEAGIPRLMAAYADAFVQAQRARAKTVLSFERFIEVARVLQRTDDAPKALARMGLTLADVMASQHHWTARMMEDDALATQFRHAMR
>NZ_CP012159.1|WP_156338241.1|1510822_1512994_+|hypothetical-protein
MSPSEPPFDRPEQRPSTAGHAADFSALHRILEEAHAELRRAAVLLERVEEPPFDPVPPARAMERALASLYDAFDARREPGDASQRVIAHVDEAVAFLERTRLGGIPGTASMPSHGGVASADRGAVGDGSDPVTRIGEHLGNARRALARGFGVAGSVPGPWPRALQPLRASIDLPRLHDVARPSLVPPLDVEALTPTHAVALPPPIPPPRSFDELRDAVATLKQRAQAAREKTAEPPSLRPSVPPPIATAPTPSPPGLALRFDPALDEGAFLRERARTAFDEIAMAAMQRMPLPGDPWRGSLVLERRLLASLDLLASLGAPAIAHVPRLLADFPVKDPSRVFAASLILGSFAGRDALAAAERALFGASGLDEDTAVAVGAALAVAPHELLPLALRSLLRDAEPWVRAVAVDVLGRRGLATAEELHAATRDDPRVAVHAIVHLAVSFGVAPQGGFEPHLTADDVGLRHAALHAVALAGDPGRLARHLDGAPEGADAGISALLLALAGDEIDASRLMERARQRPTPALLAALGWAGAVPAVGLLLEMLSSAREELRVAAAGALDRITGAGLWEEVEVAAESLDVAVPPTPELGEPRRPRLAQIVSDPRDRPEAPAPDRVERPSTDPVRWRAFWEERGAAFPVQARHRMGQLYTPMVSLRELDEAPRSVEERRLLQVELVVRTGGVVPFDPRDFVVTQERALGAWGGPARAASGSPGRWSRPARKRV
>NZ_CP012159.1|WP_050435731.1|1512967_1514056_-|hypothetical-protein
MVSVGARTPLGLDAPQTAFSVRAGMPAMREAALVDAEGEQITMCFLPTLDPRLTGAARALALAGPALAEALDGLGLHPGANTASSANNAATPPLRARLALCLDEDVDPTQGGWIASDLVRQARQRSLHVELEVSARGPAGPGYLLPALAAALTSGQLDLAILGGVHTDYDPARIARLERAGRLFRPPDHLSAVLPGEGAAFVVLADPAHLRRLAWKERARLLTVATGFEEARPDNDVSAFRATGLTAAVRSALAPFTSETDRVGWILTDLGFETFRHFEHQAVLTRTQAHFGPPQHIDSPAQRLGHLGAAVVPLHLALGVEGFRRGHAPHHRLLSLSGSDGGERAAMVVTAPAGSNALSSGP
>NZ_CP012159.1|WP_050429451.1|1514067_1515105_-|DUF2169-domain-containing-protein
MDQPRVDNATEFVVHPQVLLDRDGEKLAAIVKATFELQDDGALELAPPARTRGIRFADIPWEKTQPESIVFPADVCLRKPGTDVVLVAKAHAPGDDPVPSFDVRVEVGPLKKSLVIFGRRLWVEDGRALTPPAPVLEMELRYDHAWGGRDDDPPAPPLEEARNPIGRGVVRHPSALTHQEAPSIEDPAHPIRSVRTRPPPAGFGVVGRSWEPRRQYAGTYDETWQSFKAPLMPDDFDDRHNLCASPGLIADPPLVGGELVRLLNLTRGGGAVSFTLPRITLEIDFRIPDRDPIAFAPHLDTVLLDLYEAGPEKPVTVELVWRASVPAPRRLREARVRVRERQVPR
>NZ_CP012159.1|WP_063796217.1|1515239_1515608_+|hypothetical-protein
MSLPEFAASLPEFAVSLPEFAVSLPEFAASLPEFAVSLPEFAVSLPEFAASLREFAVSLREFAVSLREFAVSLREFAASLREFAASLPEFAAGLPEFAAGLPEFAASFPRWRGGNASTARER
>NZ_CP012159.1|WP_050429452.1|1515970_1516300_+|hypothetical-protein
MSYVFLAIAIIGEVIATSAMKASNSFTRLWPSVIVVCGYAVAFYSLSHAIRTIPLGIAYALWSGVGIVLITVAAYLLYSQRLDTPALIGMSLIIAGVLVINLFSKSTAH
>NZ_CP012159.1|WP_050429453.1|1516364_1517054_-|MgtC/SapB-family-protein
MMPVGPADLVLRIAVGAALGGVIGYERDRHGRPVGLRTHLLVAMTAATFMVVSAHFVYFQGYRKDDLTEVDASRIAASVVSGIGFLAGGAILRTGATVQGLTTAAGLWLVTAIGLAAGAGMFVVSTTVTLFGVIALTVLRRFEDKNDSATRHRVTVVLGAGGQTASQLVDAVGALGMRVNKMEYERRFDEKRRLAVTFEVLLPDSIGIGGLVDQIEKLPDVQRVHIQNL

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Crispr_ID: NZ_CP012159_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012159_5

1581408-1581504

Orphan

Consensus_repeat	Method
GGGGGAGGGGCTTGACGGGAGCCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP012159_5

>merge|NZ_CP012159|5|1581408-1581504|CRISPRCasFinder
GGGGGAGGGGCTTGACGGGAGCCGGCGGCAGGAAGCCAGGGAGGCCTGAGGTGAGCCGCTGGCAGGAAGCTGGGGGGGAGGGGCTTGACGAGAGCCG

>NZ_CP012159|5|5|1581408-1581504|CRISPRCasFinder
GGGGGAGGGGCTTGACGGGAGCCG	GCGGCAGGAAGCCAGGGAGGCCTGAGGTGAGCCGCTGGCAGGAAGCTGG
GGGGGAGGGGCTTGACGAGAGCCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012159.1\|WP_050435737.1\|1579233_1579845_-\|penicillin-binding-protein-activator-LpoB	unknown	unknown	gnl\|CDD\|372439
NZ_CP012159.1\|WP_050429496.1\|1592100_1592922_-\|serine/threonine-protein-phosphatase	unknown	unknown	gnl\|CDD\|223704
NZ_CP012159.1\|WP_082362270.1\|1581542_1584107_-\|leucine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234743
NZ_CP012159.1\|WP_050429497.1\|1592931_1593543_-\|peptide-deformylase	unknown	unknown	gnl\|CDD\|366575
NZ_CP012159.1\|WP_082362268.1\|1575106_1576027_+\|radical-SAM-protein	unknown	unknown	gnl\|CDD\|367788
NZ_CP012159.1\|WP_082362269.1\|1579911_1581009_-\|trypsin-like-serine-protease	unknown	unknown	gnl\|CDD\|365866
NZ_CP012159.1\|WP_082362271.1\|1585098_1587528_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223021
NZ_CP012159.1\|WP_050429500.1\|1597729_1599082_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223818
NZ_CP012159.1\|WP_050429483.1\|1567161_1568841_+\|VCBS-repeat-containing-protein	unknown	unknown	gnl\|CDD\|379232
NZ_CP012159.1\|WP_050429495.1\|1589762_1591913_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|379328
NZ_CP012159.1\|WP_050429498.1\|1593714_1596171_+\|MMPL-family-transporter	unknown	unknown	gnl\|CDD\|223964
NZ_CP012159.1\|WP_156338253.1\|1576099_1577608_-\|C1-family-peptidase	unknown	unknown	gnl\|CDD\|239110
NZ_CP012159.1\|WP_156338255.1\|1596167_1597733_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237030
NZ_CP012159.1\|WP_156338251.1\|1573598_1574813_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236940
NZ_CP012159.1\|WP_050429486.1\|1573003_1573540_-\|peptidyl-prolyl-cis-trans-isomerase	unknown	unknown	gnl\|CDD\|372650
NZ_CP012159.1\|WP_050429484.1\|1568972_1570256_-\|glutamate-1-semialdehyde-2,1-aminomutase	unknown	unknown	gnl\|CDD\|234607
NZ_CP012159.1\|WP_050429494.1\|1588281_1589736_+\|UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D--alanine-ligase	unknown	unknown	gnl\|CDD\|223841
NZ_CP012159.1\|WP_050429485.1\|1570306_1572958_-\|glucosidase	unknown	unknown	gnl\|CDD\|236653
NZ_CP012159.1\|WP_050435736.1\|1577866_1579237_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225559
NZ_CP012159.1\|WP_050429493.1\|1587657_1587873_-\|amphi-Trp-domain-containing-protein	unknown	unknown	gnl\|CDD\|275149

Protein	Function_ID	Function_description	E-value
NZ_CP012159.1\|WP_050435737.1\|1579233_1579845_-\|penicillin-binding-protein-activator-LpoB	gnl\|CDD\|372439	pfam13036, LpoB, Peptidoglycan-synthase activator LpoB. This is a family of Gram-negative bacterial outer membrane lipoproteins. LpoB is required for the function of the major peptidoglycan synthase enzyme PBP1B. It interacts with PBP1B protein via the UvrB-like non-catalytic domain on that protein. LpoB has a 54-aa-long flexible N-terminal stretch followed by a globular domain with similarity to the N-terminal domain of the prevalent periplasmic protein TolB. The long, flexible N-terminal region of LpoB enables it to span the periplasm and reach its docking site in PBP1B. Peptidoglycan is the essential polymer within the sacculus that surrounds the cytoplasmic membrane of bacteria.	4.06847e-33
NZ_CP012159.1\|WP_050429496.1\|1592100_1592922_-\|serine/threonine-protein-phosphatase	gnl\|CDD\|223704	COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms].	3.41303e-48
NZ_CP012159.1\|WP_082362270.1\|1581542_1584107_-\|leucine--tRNA-ligase	gnl\|CDD\|234743	PRK00390, leuS, leucyl-tRNA synthetase; Validated.	0
NZ_CP012159.1\|WP_050429497.1\|1592931_1593543_-\|peptide-deformylase	gnl\|CDD\|366575	pfam01327, Pep_deformylase, Polypeptide deformylase.	1.04606e-55
NZ_CP012159.1\|WP_082362268.1\|1575106_1576027_+\|radical-SAM-protein	gnl\|CDD\|367788	pfam04055, Radical_SAM, Radical SAM superfamily. Radical SAM proteins catalyze diverse reactions, including unusual methylations, isomerisation, sulphur insertion, ring formation, anaerobic oxidation and protein radical formation.	3.8019e-20
NZ_CP012159.1\|WP_082362269.1\|1579911_1581009_-\|trypsin-like-serine-protease	gnl\|CDD\|365866	pfam00089, Trypsin, Trypsin.	2.52376e-11
NZ_CP012159.1\|WP_082362271.1\|1585098_1587528_+\|hypothetical-protein	gnl\|CDD\|223021	PHA03247, PHA03247, large tegument protein UL36; Provisional.	4.47058e-09
NZ_CP012159.1\|WP_050429500.1\|1597729_1599082_+\|hypothetical-protein	gnl\|CDD\|223818	COG0747, DdpA, ABC-type dipeptide transport system, periplasmic component [Amino acid transport and metabolism].	2.47551e-08
NZ_CP012159.1\|WP_050429483.1\|1567161_1568841_+\|VCBS-repeat-containing-protein	gnl\|CDD\|379232	pfam13517, VCBS, Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella. This domain of about 100 residues is found in multiple (up to 35) copies in long proteins from several species of Vibrio, Colwellia, Bradyrhizobium, and Shewanella (hence the name VCBS) and in smaller copy numbers in proteins from several other bacteria. The large protein size and repeat copy numbers, species distribution, and suggested activities of several member proteins suggests a role for this domain in adhesion (TIGR).	5.30237e-05
NZ_CP012159.1\|WP_050429495.1\|1589762_1591913_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|379328	pfam13676, TIR_2, TIR domain. This is a family of bacterial Toll-like receptors.	1.18182e-08
NZ_CP012159.1\|WP_050429498.1\|1593714_1596171_+\|MMPL-family-transporter	gnl\|CDD\|223964	COG1033, COG1033, Predicted exporters of the RND superfamily [General function prediction only].	1.12081e-44
NZ_CP012159.1\|WP_156338253.1\|1576099_1577608_-\|C1-family-peptidase	gnl\|CDD\|239110	cd02619, Peptidase_C1, C1 Peptidase family (MEROPS database nomenclature), also referred to as the papain family; composed of two subfamilies of cysteine peptidases (CPs), C1A (papain) and C1B (bleomycin hydrolase). Papain-like enzymes are mostly endopeptidases with some exceptions like cathepsins B, C, H and X, which are exopeptidases. Papain-like CPs have different functions in various organisms. Plant CPs are used to mobilize storage proteins in seeds while mammalian CPs are primarily lysosomal enzymes responsible for protein degradation in the lysosome. Papain-like CPs are synthesized as inactive proenzymes with N-terminal propeptide regions, which are removed upon activation. Bleomycin hydrolase (BH) is a CP that detoxifies bleomycin by hydrolysis of an amide group. It acts as a carboxypeptidase on its C-terminus to convert itself into an aminopeptidase and peptide ligase. BH is found in all tissues in mammals as well as in many other eukaryotes. It forms a hexameric ring barrel structure with the active sites imbedded in the central channel. Some members of the C1 family are proteins classified as non-peptidase homologs which lack peptidase activity or have missing active site residues.	7.02598e-17
NZ_CP012159.1\|WP_156338255.1\|1596167_1597733_+\|hypothetical-protein	gnl\|CDD\|237030	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.	6.2113e-05
NZ_CP012159.1\|WP_156338251.1\|1573598_1574813_-\|hypothetical-protein	gnl\|CDD\|236940	PRK11633, PRK11633, cell division protein DedD; Provisional.	0.00187841
NZ_CP012159.1\|WP_050429486.1\|1573003_1573540_-\|peptidyl-prolyl-cis-trans-isomerase	gnl\|CDD\|372650	pfam13616, Rotamase_3, PPIC-type PPIASE domain. Rotamases increase the rate of protein folding by catalyzing the interconversion of cis-proline and trans-proline.	1.31893e-36
NZ_CP012159.1\|WP_050429484.1\|1568972_1570256_-\|glutamate-1-semialdehyde-2,1-aminomutase	gnl\|CDD\|234607	PRK00062, PRK00062, glutamate-1-semialdehyde 2,1-aminomutase.	0
NZ_CP012159.1\|WP_050429494.1\|1588281_1589736_+\|UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D--alanine-ligase	gnl\|CDD\|223841	COG0770, MurF, UDP-N-acetylmuramyl pentapeptide synthase [Cell envelope biogenesis, outer membrane].	2.3291e-110
NZ_CP012159.1\|WP_050429485.1\|1570306_1572958_-\|glucosidase	gnl\|CDD\|236653	PRK10137, PRK10137, alpha-glucosidase; Provisional.	0.000338109
NZ_CP012159.1\|WP_050435736.1\|1577866_1579237_-\|hypothetical-protein	gnl\|CDD\|225559	COG3014, COG3014, Uncharacterized protein conserved in bacteria [Function unknown].	1.15562e-14
NZ_CP012159.1\|WP_050429493.1\|1587657_1587873_-\|amphi-Trp-domain-containing-protein	gnl\|CDD\|275149	TIGR04354, conserved_hypothetical_protein, amphi-Trp domain. This domain usually comprises most of the span of bacterial or archaeal proteins with a length of about 90 amino acids. Some members, however, are extended by one or two copies of domain pfam07411 in the C-terminal region. No residue in this domain is invariant. A striking feature of this domain is a C-terminal region that alternates strongly charged with strongly hydrophobic residues and usually ends with a Trp residue, e.g. LEIEIEW or FEIKVRW, suggesting an amphipathic beta strand structure. We suggest the name amphi-Trp for this domain. Some members of this function occur regularly in genomic contexts that include putative kinases of unknown specificity related to (but distinct from) HPr kinase, a Ser-specific protein kinase. The function is unknown.	4.15941e-08

>NZ_CP012159.1|WP_082362269.1|1579911_1581009_-|trypsin-like-serine-protease
MLLERVRAGLRLPPHIIARSHAGTALILSATLAGCAFAAAPDDAIDEVDVDGEVPVESASFAIEGGYAAASDHAVVGLAVIGPSGRLARTCTGALIAPDLVITAQHCVATAPELIRCDRAKFGPTDDAVKVHITTSDDMWSSGATWTRGRELLLPPYGRAVCGHDLALIVLESPLSPEEATPLDLRLDRTAEDGEPYSAVGFGNTSGAVKDAGKRRRRDGLQVECVGYRCGDSDEVALNEWRGNAGACSGDSGGPALDRQGRILGITSRGPDGCDDPIYGGLVEHREWLTEAALRLAEEGDYEAPDWTDGQRDASARYDAEHIDPRWTSCAVSVPVPGRSGGTMAAVAIAVLGLALLRRQSNIPS
>NZ_CP012159.1|WP_050435737.1|1579233_1579845_-|penicillin-binding-protein-activator-LpoB
MPTSNRSFAALIAASLLALPVAGCGPSYVRGSEVEGLDDAAMSTGIDRRDMEQLLHENLKSLMSSPVARQWAADGSRPTLAIYPLANETSEHIDSQLMALLSDVETFMVNSQLVTVVSVERQMQMIAEIEKQHGGGFDRNNIAEYNRQLGSRYYLTGKVFTADERAAGERRVQYFMFMQLIEVATSAVLWQNKAAFTKALIQN
>NZ_CP012159.1|WP_050435736.1|1577866_1579237_-|hypothetical-protein
MRATLGRWLHALSTATTALFLSLGQAGCAGHESRVQNALAALNEGKPAQAAAHLNEEMKVGSNDELPQLTGDNPLLLLDRGNILLAMDRNKLSARDLGAADKSIDMLDMSRTAVDEIGKYIFSDDSGPYRAPPHEKLLINTINLMNYLALGDLSGAKVEARRLAIMQKYLRDHEETTALIGLGSYLAGFAFEKSGGASEALLYYDDALRYAQYPSLRDPLRTLVRDEPKSPGIKALIGGAGPLPSVAETGEAELLVVVGFGRSPRKVPNRIPIGLALTILANDISPADRAQANALAAKGLVTWVNYPTLTAARGSYTIPTFSLDGAPVRMEQAIDIEAEVRKAWRKVEGTVILSALTRTITRVVAGEVVQGVTQAVDKDSGPLGLLLGLLTSATLTVADTPDTRAWSTLPAQIAISRIRVPAGQHELVLSARNVTKRARLNLRPGGWAFVPMMALR
>NZ_CP012159.1|WP_156338253.1|1576099_1577608_-|C1-family-peptidase
MNTSTLPLIALALSTLACSSGRATPPRQPPLATSPGGMGAPAAGGTHGTTGAPRGSGAQAFGFSTAGQPAGAQVLPFILRPVNVSALRALQGRRCAPKEVAPDVWVSFECGPAQPITRAVPFVPSNRMGFLSGVLPANVDHRQSGFSGPIKSQQAVGACTAFSLSSAMDHGIRRMGRQETTAPLHVWSKYAVPQMGTAGDRTTGEAITVEPVWPYDPIKACKMMRDPYDDCGAAYNVRPGSGDSDPVLRAEQVKADGQGRYRVIAIEKLQTSPVNLQELSAVLAGGDAVWVSFRVNSDAWKSQSLQNGVLPEYLHDDGSGHAVLLEGYRTVGGAKQFLIHNSWGERWGERGYGWISESNVQRHLRAAYKVRVADPGSPTPQPDASGCPAGQVRDSVLGTCAALCASGSPPAAGVCLPSLPGFSPQGIPGFPGLPAIPGLPGVQPAPQPGPQPSPQPGPQPSPQPSASCPQGQAPDLMSGQCLPLCPSGMPAIGGMCIPPILR
>NZ_CP012159.1|WP_082362268.1|1575106_1576027_+|radical-SAM-protein
MSRCASELTIPGDVPLLDVVLGYDCNLACSYCTITEGMRRRELPSARIVREIDRAAARGFADIAFTGGEPTIRPDLPALVRYARKRGFAHVKVSSNGLRYAYAEYLDHLIACGVDQFNVSLHAFGDAAYERTVRRLDTAHLRRKALDNLVARGLDPVADLILKEDTYRDLRPWITSLRAQGLRRFALWLVSLTDQNQGNVDQLPRLSEVATEIRGACDDARAGGYEVWSLHVPRCFLPGHEEHVRHPGDDLVTVVTPDEVFDLKDSRLAGGVKPEGCTGCQHVGRCPGLRQDYIAVHGAGEVRAMT
>NZ_CP012159.1|WP_156338251.1|1573598_1574813_-|hypothetical-protein
MESPTTERPSTERPVTAPPTPEPPASTSEVMEAPSHPPPAPTAFDEAAGAEEERAKGAPVAPAAKRTPTHQGVAYGIDVGVLNRQEKFVGLVQLALYANEPLRAYSALLLGVGNAPEHFVGAAEVALVLNGNESFRGGIAVSPFNMMHDFRGLSQVSVFAGETRSFKGVLSLAGGYYSALDFVGGLHVALVTESKRFTGLAQLGAVNLGSYGEIGSKAKPDVDFVGLVQGGLYNAHGGTFRGMVQVGVINRGAWLQTGAQVGLWNGAEAEGFEGGLQVGLLNRARDRFAGAAQVGVGNLVDENFEGAFQVAVVVNRVGKAFAGAAQVAPINLVEAIQGAQVGAFNLSSSQQGLQAGVVNVGGEMRGVQVGLVNHARRLRGLQLGLLNLSGDGGLPFVPVLNLGL
>NZ_CP012159.1|WP_050429486.1|1573003_1573540_-|peptidyl-prolyl-cis-trans-isomerase
MRRLLSRALLAVHAAPSAVALAACVFTLPACSTLATSPEWVGGGLITSAPIREAEEEAASERERRRLASQPQKIGARHVLIMHKQSKSRADEMTRSRDEAKKLAQEVLLQVRGGAKFEELVAKYSDEPGAGERGGDLGVFDRNTMVKSFSDAAFSLKVGEISEVVESPFGFHIIQRTE
>NZ_CP012159.1|WP_050429485.1|1570306_1572958_-|glucosidase
MEQPDLAPTAEHQRLEEARLRLLRWRHWGPYLAERAWGTVREDYSRDGSAWDHFPHDHARSRAYRWNEDGLGGICDRNQILCLAVALWNERDPILKERAFGLAGPEGNHGEDVKEIYYYEDATPTSSYLRYLYRYPQRAFPYAQLVEEGRRRSTREPELNLEDLGAFDESRYTDVTVEYAKRDPNDILMVITVENRGPEAAPIHVLPHVWFRNTWAWSEPAGEAPELSALEGHEGAVALQAKHPSEFGTHYVYVQGSPELLFTDNETHNERLFGSPSRSRHVKDAFHDVVVRGDRDRVNPARRGTKAASWHRFVLPPGGRERILVRLTKEPHRDPFAGSEALLAQRRHEADEYYRHLQGPEISDERRLIHRQASAGLLWSMQFYAYDVDVWLRGDAIPPPEERLGGRNAHWRHLSIADVISMPDAWEYPWFAAWDLAFQAVALSSIDMELAKGQLKLLVKEWYQHPNGQIPAYEWELSDLNPPVHAWATFQLYKIERAQRGVGDKVFLERVFHKLLINFAWWVNRRDVQGNNVFEGGFLGLDNISLFDRSAKLPPGMRLEQADATAWMAMYCLDLMRIALELAQDNSAYEDLASKFFEHFLRIAYALHHAEDGRLPLWSEEDGFYFDVLLEGKRSQHLKIRSLVGLIPLFAVHVIPPSVYGHLANFRRRTEWFLEKNPELAEAITVRPDGRKVLSAVPLDRLSRVLGHLFNEAEFLSPHGPRSLSREHATQPVRLDGRGPGYEVAYEPGEAPDRMKGGNSNWRGPVWFPMGYLLYRSLQRLDHGFGDMLTIPPVSGCGGRTLREGADELARRMIAIFERDGAGRRPVYGNNALFQDDPHFRDRILFFEYFHGDSGEGLGAAHQTGWTALVGDMILRLAREHCP
>NZ_CP012159.1|WP_050429484.1|1568972_1570256_-|glutamate-1-semialdehyde-2,1-aminomutase
MSDRPASQALFERASAVLPGGVNSPVRAFRAVGGSPVFIARASKARLISADGDEYIDFINSWGPAILGHGHPAVIEAVREAAMGGLSFGAPTALEVLFAERLQKLYPSLEKLRCVSSGTEATMSALRVARGFTGREVVVKFEGCYHGHADHLLVKAGSGLATFGVPDSAGVPEAIARLTLTLPYNDPEALRAAFASRGKEIAAVILEPVVGNMGCVPPEPGFLQLVIDLCREHGALSVFDEVMTGSRLAPGGAQERFGLRPDMTTLGKVVGGGMPLAVYGGREDVMRTVAPLGPVYQAGTLSGNPVAVSAGLATLAELTPALYERLEVLGAALEEGLRAAARDAGVPACVQRVGSMITLFFREGPVRSWAEASGSDTKRFARWHGEMLARGIYWPPSQYEAAFLCAALTDDDITRTVAACREALAAT
>NZ_CP012159.1|WP_050429483.1|1567161_1568841_+|VCBS-repeat-containing-protein
MRRNILHARWIPGLPRIGEVIALALGALALGTTACAGDGDGDRNRDNPVGGGSKPLPDAPSCVVAGGSATVSAPELRMELMDRRYESGWLSSPVAADLDGDGVNEILVARAGYFTVFDAEGNERWRFDEAASIAPRFWSSPVVADFRDDERLEIVLAGGGQVWMLDSDGNVLSGWPREWQYELRSVAAGDVNDDGQLDVIVASTRHEPDILTAYTAGGDTIAGFPPAGAGAIGCNVRENCWIAGAYDQNLAVGDLDGDGRQDIVATQDNAYTGFYRGNGELFDSNPMFEDRPKTLGVRYLHDLRLAQQGFADDESSDLQAHFTNTAPTIADIDEDGTYEVILLASVQNAGQDRREQGVGLWVVRHDATRLPGFETPFHSDEYLGGLWDLDGNIVAMTNQVTVANIDGARGKEMIYAGFDGRIHAVRADGTEFWAVTYTNRPDVFTGGVVVGDLSGDGKPEIVFATYSPQGGQSDLFILDAGGSILHQVKLPRLGSMAVPTLADVDGDGTVEILVSTRETPWDSGEPAVLVYSVASSTTGCLLWPTARGNLYRNAWVRDP
>NZ_CP012159.1|WP_082362270.1|1581542_1584107_-|leucine--tRNA-ligase
MSAEQPSAPGEPSAAPHTATDESNEPREVARYDHLEVERRWQQYWDEHETFRAVRESGSTRPKRYVLDMFPYPSGDGLHVGHPEGYTATDILARYWRMKGMDVLHPMGWDAFGLPAEQYAIKTGTHPAETTAKNIGTFKRQLKMLGFSFDWSREVATTDPRYVRWTQWIFVQLFKKGLAYQDEVTVNWCPELGTVLANEEVIDGKSEVGGHPVERVPLRQWMLRITAYADRLASDLEHVDWPSGTLAMQRAWIGRSEGATISFTVDGYSGGALEVFTTRPDTLMGVTYVVLAPEHPIADWLIKTPGIASDERREAAQKYVAATINRSDRDRLASAAKEKTGVDTGLLATHPITGAKVPVWIADYVLGGYGTGAVMAVPGHDERDFAFAKVHGLPVVEVVSPDGELHGALEAAFTSDGTAVQSGEFDGLTTEACKRAVIDKLKSLGRGDGQVSYKLRDWVFSRQRYWGEPIPIYFPVELESPDGDPRKGAPHRVRFDQPIAVDEAELPLTLPELSDFRPGNDPAGPLARAVDWRFFQKDGRWYARETNTMPQWAGSCWYYLRFIDPLNDAEIFSQKAYDAWMPVDLYIGGAEHAVLHLLYARFWHKVLYDMGRVKHPEPFTKLVHQGMILGEDGEKMSKSRGNVVNPDDIVRAWGADTLRLYEMFMGPLEAVKPWQSGQIQGVVRFRDRVHAICTKPLSDALPDETARLLHRTVKKVTHDLDAMSFNTVISTLMIFTNHLAPQASPPREAVEKLILLVSPFAPHIGEELWRLSGHEASLAYEPWPTWDEALCVDDVIEVPVQVNGKVRGRISLNKDATEAQAREAALENVASAVAGKQIKKFIYVPGKIANIVVG
>NZ_CP012159.1|WP_082362271.1|1585098_1587528_+|hypothetical-protein
MTDKYSSWAGPGGEGAAQPGPPHSSGAYGAEVPGSGGPFRPLPAPPLQSPGSLTRLSVPYGLGIQSQAASPPAAPAAHAQAAEQTAITLVKSVLPHAEAYAAPPPGPSANPYGAPHASQPGYGAQPGYGVQPGYGGQPGYGAQQGYGGQPGHGAQPGYGGQPGYDAQQGYGGQPGYGAQPGYDAQQGYGGQPGYGAQPGYGGPQQTMPAVPGQASHGQAYGAQQAYGAPPPSGHQNPPQYVPAPQYGGGAQVPAAPAPHFAATPQMPGGHPSYGGAGAQAPGGFGPGQFPVKPPVGAIVVNEDTMPPGALPTPRITPPGAVAMHGGVAMPSPGLDLGNVTAAAGLPLPTPVMPFVPARGASPAAPQPAMAPLHLKTPAPPMGAMEPPPPPMVSPRGGTQPTGVLQAPPDPGYRPPAPPAPPAGGTMPAPSPSTSSSSTPLPKSTTVMAVGGGGPGLGAPPGAAPQDGAATVIPALAGVSPVPGGAQGASAPGELPLFPDSSPHSSRSGPASTDGVPISASPSTPPGSLPSGMLHGAVPAEGLLGGAASGAAGLVPGAATSGAAGLVPGAAASGAAGLVPGGATSGAAGLMPGGATSGAAGLVPGGATSGAAGLVPGGATSGAAGLMPGGATSGAAGLMPGGATSGAAGLVPGGATSGAAGLVSGDIATGDVVNVVAGPGEGAEAVASPWAVPGARSDAQLAGGTAGTSDPGGAAVSPRRGGDGGQRKLIIGLVIVLVLAVGVLVTILAMSRGGSGDPISIGFTMPEPEPTVTETAAAPTASAVVPVKMWKPKPKSDDIYDEVDRERKQP
>NZ_CP012159.1|WP_050429493.1|1587657_1587873_-|amphi-Trp-domain-containing-protein
MTERDVDRHCSTDEFIATLRRLADALEQGEPFRIQVAGKRFTVPAGAELVIEHELEGGDEELAFELRWKNG
>NZ_CP012159.1|WP_050429494.1|1588281_1589736_+|UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D--alanine-ligase
MATPIPRNVAPFTLDELARIGGGRVLQPGPEVRGISTDGRGLTPGAAFVALVGERFDGHQFLEQAIRGGASAVVVSREVSVPAGVGVVLVPDTLAALGAFAGAHRARWGSTAHPAGARAVVGVAGSAGKTTTTRTVAALLRAVTEGVGRGAVHATAGNLNNAIGVPMTLLGLTEAHRFAVVEIGTNCRGEVATLSAIAQPDVGVVTTIGVEHTEGLGSLEEVAEEEGDLFASLPVGGVAVGNADDPQVVLQLGRASAGRRVGYGQAEGAAYRITGRKPVGLEGCAVEVEREGEALALWAPLLGEAGALAAVAAVAVVEALLGERLTEAVAEKALAGMEPLSDGRLAAVELPDGTVVIDDSYNANPVSMRASLRAAAELSVSLGRRLLLVLGEMRELGALSAEEHDALGVEAAAVGPAAVIAVAGDAARTAKAAAAAGAVSVFVATAEQAAVEVLARARSGDLVLVKGSRGVKMEHVVEVLRERR
>NZ_CP012159.1|WP_050429495.1|1589762_1591913_+|tetratricopeptide-repeat-protein
MATPIRVFFAYAQQDQSLRDEFAAHLTYLQLRGAIADWRDRRLGDEDAWGARVSEHLKGAQVVLFLISPHFLGSAYCMSMEVTWALAEHAAGTMRVLPVILRECSWNQAPFSGFVPVPRDGRPVTAKADRNEAWTVVMRELRKAVDEMAVIRRGGAAPRPPGKEPAPQVVLPAVTEWIASAVEAQQAQAPVTRGDLELSLEAARLEDDVAEVAALAQRLGDLHADRGRHYDARTHYEEALASFGRAGDACGAAGTLERLGEVSLWLGQPGEARVRFEDALRSYRRGADLGGEARCLEALARTALRGGDLPLSQGLFERALAMHRQGGDVAGQAACLGALGDLAMWVRPVSGEGRPREGAAGGFVGPGRAPEIGEARQRFEQALPLYREARDVAGEARCRRRLGDLALEQGLIEEAVARYGDALALYRQIKEEAGAVYCLRRLGDLAVVQEQFGEAQQRYQDAKDVVGEASCLKRQGDLALDRAKPHMAILHYEQALERFREAGDPVGDAACLVGLAEAALDRGEDEDAVLRYHQALPIYRELCDASGEAGCLERLGDLTLDQGKPEDARWWYERALARAREASDELREANALLGLGNLSLALSRTEDAARSYELARGIYRRSRDVLGEANCSKRLGDVARREGRFADAQAAFELALSLYTSVPAPYSIGQTHRRLAKVAPSVDERRQHLEMASAAWLSIERADLIAALHQEFPEDT
>NZ_CP012159.1|WP_050429496.1|1592100_1592922_-|serine/threonine-protein-phosphatase
MVYRDAPVGPARLLFAARTDTGPLRTANEDAYLILSLRDRAPWTSPPNEARHAGSIETDAGLLFAVLDGLGGARGGTEACRIAIEAVRRRIHAGVSVGHAALRRASIEALEEANRAVFRASTTLISLTGIGATVTAAAIAGRWVHLVHAGDTRAYLLHEQQLQQITRDDSLLDGTREHHVPLEELHHLPRTVITRALGMQEEIILTDTSIELGPRDLLLLCTDGVHRFLPDPTLQALLRRHPDPADACEALIDAAIRAGSSDNLTVLLTRIAS
>NZ_CP012159.1|WP_050429497.1|1592931_1593543_-|peptide-deformylase
MKLPKIVQAGDPVLRTPAAPVPAEMIGTRKLKELVSTMVEVMRKAPGVGLAAPQIGIGLQIMVLEDGEALMGKLSVEDREVRGRAPFPLTAIVNPTLTPLGSSLASPGGAGRATFFEGCLSVAGYMALVERDLRVEVTGIDPDGQPIRWVAEGWPARILQHETDHLRGTLYVDRMLTRSYCSNEEAQRWINLPVAEVRAALGV
>NZ_CP012159.1|WP_050429498.1|1593714_1596171_+|MMPL-family-transporter
MSSIPAPPGPVRFGRRPLIIALLTVFTVLAFAAVTFRLRLDPNIASLLPERGEASALRRYVRGFGGGDLAFVLVQAEDPAVAEAASAQIARELAARPSVQRAADRVDTTRALDPWLLWRHADARARERLAAALTPEGMRERLAETRALLLAPGSGALAETLAVDPLRLGQLVAEGGDIGAGVRTRPDGAFATDDGRARLVLAQPKGQALRGDDARAFVEDAEAVMEDARVDHPGARIGLTGGHAIAAATEQMLNRDLAWSGTLSMLLASVVFALLFRRVRALLAVLPPLALGTLWTAALATVFPGGLSAIAVAFMSVVVGVGVDTGVHVYAALLEARREGASPEEAARVARARAGRPTLVAAVTAAAAFAALSLSDIAALRQLGLLCAAGEVLTAIAIVVVTPALGAWLERKPPPKEQVPPWTEGAYALTKTRGRAVAMAFVALAPLVAVALGAAPPLADAFIAVRPAKLAPLQVQEAIFEAFGGKSGQWIVLVEDAEEERARGRADRLAERLSEMREEVEAVDALTALAPASATQLERFAARDALDLPGRADALERALVETGFAPARFEGVLAGMRAPARQELSLEALGASPASILLSRYLAQDGDEHLAAVYVRPRDRASMARIEQVVKEVDPAASLTGYSRLEASLKVTLSRDLPRIGLCAGVLVVVALALSLRRKRDIVLAALVVAVEIATVLVLSRLLDVPLHVYDALVIPVLLGITVDEGMFLLHRAGRVEAEGGDPIRETLRREGPVVAATALTTAAGFVALATCDFDGLRDLGRVGALGSVVGLVIALVVVPAGLRLWPAPASMAGSDRR
>NZ_CP012159.1|WP_156338255.1|1596167_1597733_+|hypothetical-protein
MNPSPRLLLVLAGVSLAAPTFAQSAPTRGASAERDKKTPARPAAAPSAPAGAGQPAQGAAGSTAPGSAGQPAQGSAGHAASTPLRPAVSRVVDAIARALLPAGRAAVVVTAPLVSDAAAPRGAQLTALLAAQLAGRLGEGTQARVEPAALSAARATAAGAPWLVHLGVEIAVGKLRVTADVYPVPRTVWARIRDPEPGPVAHAYAEASLDAEVRSFLAPVSLTAALSVERARNFESDVVALACGDVNGDGGPEIVSVSRRRVSLLRLSGGKVVPLLSRSWADLVGVHPTPWREPVGFATLVTREQGGDELPGFVDVGLTDRARSVRFDGALQVLAELPGLAVPDGGGSACTRVGGLSVSGALARCVAEDPAPASATVGGQYDALASARLLSSSGEPLLVWAGRERGALELRDSSGRRQVLSSAGAQIALGDLDQDGEPEVLASLDVQNAIDDAVVVWSWPRRAQGRPKGGASAVAQGDDRLQEALRLPAPAGVHAVAVCPPDGPGRAPFVVATSDEIWVVR
>NZ_CP012159.1|WP_050429500.1|1597729_1599082_+|hypothetical-protein
MSIGRRRFLGQAALLASAALGHGSAYAMGRTPLGGRFALHVPWATSSLDPHEIRDPLAALFGAAVADSLYALDGNGVAYPTLAAALPGREGTAAVVQLREGLRTGRGVALDARDVVFSVERARARGAAAALADVPKPRPHPRDPLAVLFSGADPQRLARALATPLAALLPRSFSPLAPDATGPFRAELSARRMNLTRNLNAARGASFLDAIDVVRSDDLTTSLREFEAERDDVGWLGAGLHAARKGSVRFDLGPVAWVVLVTGAEAGAFGQPGVAQRLAEAVPPERLAHLALGALPAARGDAAWGGPATELLVDETSPHLVEIAQAVAPVLSRPGHEVTAAPVSRTELARRRARGAALAIDLVRPAGSGALGALLALATAEDRARGVDLARHPPRLAAGTPARSLTTSLRVGVLGEIKVAGAHMPDLVLGRAAGDGGWDLGASYRRAPKR

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Crispr_ID: NZ_CP012159_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012159_6

2120887-2121004

Orphan

Consensus_repeat	Method
CGTCGCAAGGGTGCTCGCGCATC	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP012159_6

>merge|NZ_CP012159|6|2120887-2121004|CRISPRCasFinder
CGTCGCAAGGGTGCTCGCGCATCCAATCGCGAGGCTCGTCATGCATGTCGTCGCAAGGGTGCTCGCCCATCTCATCGCGAGAGTGCTCGCCCATCCGTCGAGAGGGAACTCGCGCCTG

>NZ_CP012159|6|6|2120887-2121004|CRISPRCasFinder
CGTCGCAAGGGTGCTCGCGCATC	CAATCGCGAGGCTCGTCATGCATGT
CGTCGCAAGGGTGCTCGCCCATC	TCATCGCGAGAGTGCTCGCCCATC
CGTCGAGAGGGAACTCGCGCCTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012159.1\|WP_050429832.1\|2119231_2119561_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050429839.1\|2130114_2130801_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050429843.1\|2134860_2135877_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050435775.1\|2127974_2128538_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_156338344.1\|2119707_2120037_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050435774.1\|2121130_2123737_+\|primosomal-protein-N'	unknown	unknown	gnl\|CDD\|224119
NZ_CP012159.1\|WP_169796478.1\|2120111_2120381_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_082362317.1\|2106939_2113341_-\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|274362
NZ_CP012159.1\|WP_082362318.1\|2113533_2114484_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366286
NZ_CP012159.1\|WP_063796236.1\|2104756_2106943_-\|response-regulator	unknown	unknown	gnl\|CDD\|274362
NZ_CP012159.1\|WP_050429831.1\|2118294_2119197_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050429838.1\|2128782_2130078_+\|6-phosphofructokinase	unknown	unknown	gnl\|CDD\|223283
NZ_CP012159.1\|WP_050429836.1\|2124753_2125527_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_082362319.1\|2116306_2117947_-\|pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|179673
NZ_CP012159.1\|WP_169796477.1\|2114792_2116310_-\|GMC-family-oxidoreductase	unknown	unknown	gnl\|CDD\|225186
NZ_CP012159.1\|WP_050429837.1\|2125811_2127914_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050429842.1\|2134075_2134777_+\|STAS/SEC14-domain-containing-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_169796479.1\|2130797_2132039_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|379114
NZ_CP012159.1\|WP_050429828.1\|2104308_2104662_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050429841.1\|2132237_2134079_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223496

Protein	Function_ID	Function_description	E-value
NZ_CP012159.1\|WP_063796236.1\|2104756_2106943_-\|response-regulator	gnl\|CDD\|274362	TIGR02956, sensor_protein_TorS, TMAO reductase sytem sensor TorS. This protein, TorS, is part of a regulatory system for the torCAD operon that encodes the pterin molybdenum cofactor-containing enzyme trimethylamine-N-oxide (TMAO) reductase (TorA), a cognate chaperone (TorD), and a penta-haem cytochrome (TorC). TorS works together with the inducer-binding protein TorT and the response regulator TorR. TorS contains histidine kinase ATPase (pfam02518), HAMP (pfam00672), phosphoacceptor (pfam00512), and phosphotransfer (pfam01627) domains and a response regulator receiver domain (pfam00072). [Signal transduction, Two-component systems].	2.46955e-56
NZ_CP012159.1\|WP_050429838.1\|2128782_2130078_+\|6-phosphofructokinase	gnl\|CDD\|223283	COG0205, PfkA, 6-phosphofructokinase [Carbohydrate transport and metabolism].	3.67373e-61
NZ_CP012159.1\|WP_169796479.1\|2130797_2132039_-\|AAA-family-ATPase	gnl\|CDD\|379114	pfam13304, AAA_21, AAA domain, putative AbiEii toxin, Type IV TA system. Several members are annotated as being of the abortive phage resistance system, in which case the family would be acting as the toxin for a type IV toxin-antitoxin resistance system.	3.86853e-20
NZ_CP012159.1\|WP_082362319.1\|2116306_2117947_-\|pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|179673	PRK03910, PRK03910, D-cysteine desulfhydrase; Validated.	7.17481e-42
NZ_CP012159.1\|WP_169796477.1\|2114792_2116310_-\|GMC-family-oxidoreductase	gnl\|CDD\|225186	COG2303, BetA, Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism].	1.21659e-40
NZ_CP012159.1\|WP_050435774.1\|2121130_2123737_+\|primosomal-protein-N'	gnl\|CDD\|224119	COG1198, PriA, Primosomal protein N' (replication factor Y) - superfamily II helicase [DNA replication, recombination, and repair].	1.29447e-144
NZ_CP012159.1\|WP_082362317.1\|2106939_2113341_-\|HAMP-domain-containing-protein	gnl\|CDD\|274362	TIGR02956, sensor_protein_TorS, TMAO reductase sytem sensor TorS. This protein, TorS, is part of a regulatory system for the torCAD operon that encodes the pterin molybdenum cofactor-containing enzyme trimethylamine-N-oxide (TMAO) reductase (TorA), a cognate chaperone (TorD), and a penta-haem cytochrome (TorC). TorS works together with the inducer-binding protein TorT and the response regulator TorR. TorS contains histidine kinase ATPase (pfam02518), HAMP (pfam00672), phosphoacceptor (pfam00512), and phosphotransfer (pfam01627) domains and a response regulator receiver domain (pfam00072). [Signal transduction, Two-component systems].	4.81178e-57
NZ_CP012159.1\|WP_082362318.1\|2113533_2114484_-\|hypothetical-protein	gnl\|CDD\|366286	pfam00756, Esterase, Putative esterase. This family contains Esterase D. However it is not clear if all members of the family have the same function. This family is related to the pfam00135 family.	7.43171e-14
NZ_CP012159.1\|WP_050429841.1\|2132237_2134079_+\|hypothetical-protein	gnl\|CDD\|223496	COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair].	5.70884e-07

>NZ_CP012159.1|WP_169796478.1|2120111_2120381_-|hypothetical-protein
MVIGIGASGCRSAVGTICDTKCDCEGCSNREYNECIDDVERDERRAVNRRCADEFDEWVACVDDTATCRGRDYDDRCGPERRDLRDCMD
>NZ_CP012159.1|WP_156338344.1|2119707_2120037_-|hypothetical-protein
MRSAPLPALLRSFVFTMSLGVGLVTMAGCRSEIEKLCDDGCDCTGCSEREYNQCIDVLERAEERAASLGCADEWDELIGCTNDESACRGDDFILESCNSERQDLARCAD
>NZ_CP012159.1|WP_050429832.1|2119231_2119561_-|hypothetical-protein
MNFTRSLFLVSTFAAVFSTVGCGKSAVEEYCEAKCACELCSDPALDACVIETERLRNTAETNGCAEAVDAALSCLHTTAECRSEEYGGGQFETDGCVAEQEAMQQCVSS
>NZ_CP012159.1|WP_050429831.1|2118294_2119197_+|hypothetical-protein
MIETMKAGVRVVLVAFVGIAAIGCAGASEVDDLDLDGDVELDEADMELQAPNALNPNALNPNALNPNALNPNALNPNALSHVALDTTELSSLAPLSAANTEGELARQLLRYTTRCALTPTQSVSVAWVDAAGAYHQEQYPGSLGLAPSWAQAPLDDEEDQRWVSACLAALTNWYGIQVIVSLRGSHVDLVGISTEEAATYTAIEGAFWGNVFGPTPALWACHNPGTAMFARARRRDCAAGHLEKNLSTGQLVPKACGMIQLAGDCSTLCEQAAAGGGHFPECQASGEQAPNRDVITTYLR
>NZ_CP012159.1|WP_082362319.1|2116306_2117947_-|pyridoxal-phosphate-dependent-enzyme
MNAMVRSLEAFDDAIPRRGWVGAPSPVTALPRLAADLGLAHLAIKRDDLCDALFGGTKVRKLDYVLAAPPFAEAKAWVGSGGIGSGNMVALVAAGSALGREVHAHLFWTPVSAGILDNLAFTASGAASLTFHPSRAAIGLRQTSLMLSSSPFVGGHPAVPPGTSMPLGLVGLVRAALELRAQIDAGELEAPSRIYVPLGSGGLAAGLSVGLAYAGVDAQVVAVAVVERFISTRMRLRSLQRGLATLLEARGLGPVPPPVPLVVARDQVGRGYGVVTAESLAACELLAAEGLALDPVYVGKAMAGLLADAGRMRGGSVLLWQTARRAPLPHDEGWRGKLPKALARRIEDPAGADASRRRALFAVGAVVGASVLGARFLGGYPARPSFQGGVLSVREAHVLEAAAEAMLPAPVSAEAVASVPERVDRYLTGMSAGTQREVRAMLLLIEHGTTPLGGRLRRFTSLSAGERSAFLDGLGARGGLLSQAYQGLRDLVMVGYYQQPSTWGALGYGGPQVPLGYDPHGPERREWPTYDAMRAPVGARPKGAQR
>NZ_CP012159.1|WP_169796477.1|2114792_2116310_-|GMC-family-oxidoreductase
MIYDAGTLALPLQVKADLCVIGAGAGGAMVAMVAAEAGLSVVVLEAGEFLTPADMVQREEVMFPRLYWDSGGRTTADRAVHIHQGKGVGGSTLHNLNLCKRIPASIRARWAVERRLEHLPVSAWDALYEEVEALLEVKAVPRAQWNRHNQLLEAGCKALGWRGGGVSHNRTGCVGSGFCEVGCAYDAKNNAAKVLVPRAVKAGAEVVARCQAVRVRHEGGRVVGVSAVGLAPETNRPRGEVMVEAPRVCVAGSATSTPALLLRSGVRDPGGETGMGLRIHPALVAAGEFDEPVRAWEGIPQTYECTELLDLEREDGPRAWIIPAFAHPVGTATLLPGHGGSHRSLMRRYAHLAAFTAMIHDHTAGQVRPDGDLGLQIEYWPDAGDRREMLRGVHGCAKLLFAAGARRVIIPSRPVRIYERGDALDELLAFDLTRGSMDVTAVHPMASVPMGDDPAVAAVSSEGKHHHVEGLWVADGSLFPTSIGVPPQMSIYALGLHVGRALARS
>NZ_CP012159.1|WP_082362318.1|2113533_2114484_-|hypothetical-protein
MGDSGAGGSCDGSGEPLPAAPTPFTLGGQQAWAHDEGFASGYFHTYDALDVGGAGARKVHVFLPRDYGSSCVQYPVVYMNDGDTTFWPGSVGKTWDVAARLAELYAEGAIPQVIVVAVHPLARDREYTHAEFAPNRVCCGVSSYADYLADRVKGFIDANYRTRREREVTAIVGSSHGGLGAFLVGALRSESFGLVGSLSPSFWVGLDAVHGGAYTGGALASSALLDLTGAALGNPAMRPRVWIDWGLVRSGGFHNAEIEAAATTRGQEMVTLLGASFGYGAGELAWNEDPQGEHDELSWSRRFPEVMKFFYGTSSP
>NZ_CP012159.1|WP_082362317.1|2106939_2113341_-|HAMP-domain-containing-protein
MEKGRGTPEALRKRSARSKNGHEKEAAGSLSRGKSNTSRRAPAGLRSSSASESSLDGRQLLAALVALKKGDFSVRLPIDLEGLEGKIADTFNEVVDLNEKMAKELDRLARVVGKEGKIDQRAWIGEVSGAWSDTVASVNTLVGDLVQPTSEMARVIGAVAKGDLSQTMALDGGGRPLEGEFLRTARTVNTMVEQLASFASEVTRVAREVGTEGKLGGQASVSGVAGTWKDLTDSVNSMASNLTAQVRNIATVTTAVANGDLSKKITVDVRGEILELKDTINTMVDQLRSFASEVTRVAREVGTEGKLGGQASVPGVAGTWKDLTDNVNSMAGNLTSQVRNIAAVTTAVANGDLSKKITVDVRGEILELKNTINTMVDQLNSFASEVTRVAREVGTEGKLGGQAEVRGVAGTWKDLTDSVNSMASNLTAQVRNIAAVTTAVARGDLTQKITVDVKGEILELKNTINTMVDQLNSFAAEVTRVAREVGTEGKLGGQAEVRGVAGTWKDLTDSVNSMGSNLTVQLRDVSKVATAIANGDLTQKITVDVRGEILQIKNVVNTMVDQLSSFAAEVTRVAREVGTEGKLGGQAEVKGVAGTWKDLTDSVNSMGSNLTVQLRDVSKVATAIANGDLTQKITVDVRGEILQIKNVINTMVDQLSLFAAEVTRVAREVGTEGELGGQAEVKGVAGTWKDLTDSVNSMASNLTAQVRNIAAVTTAVANGDLSKKITVDAKGEIMELKNTINTMVEQLRSFASEVTRVAREVGTEGKLGGQASVPGVAGTWKDLTDSVNSMASNLTAQVRNIAEVTTAVARGDLSRKSTVDVKGEILELKNTINTMVDQLSAFASEVTRVAREVGTEGKLGGQASVPGVAGTWKDLTDSVNSMAGNLTAQVRNIAAVTTAVANGDLSKKITVDVRGEILELKDTINTMVDQLRSFASEVTRVAREVGTEGKLGGQASVPGVAGTWKDLTDSVNSMASNLTAQVRNIAAVTTAVANGDLSKKITVDVRGEILELKNTINTMVDQLSAFASEVTRVAREVGTEGKLGGQASVPGVAGTWKDLTDSVNSMGGNLTNQVRGIAKVVTAVANGDLKQKLAVDAKGEIAALADTINGMIDTLATFADQVTTVAREVGVEGKLGGQASVPGAAGTWKDLTDNVNQLAANLTTQVRAIAEVATAVTKGDLTRSIRVEAQGEVASLKDNINEMIRNLKDTTLKNSEQDWLKTNLAKFSRMLQGQKDLLTVGRLILSELAPVVGAQQGVFYTMDTTKEEPRLKLLASYAYKQRKNVDNQFKLGEGLVGQCALEKEKILLVNAPPDYITITSGLGEAPPVNIIVMPVLFEGQVKAVIELASFERFSPTHQAFLDQLTESIGIVLNTIEANMRTEDLLKQSQSLARELQSQQEELQQTNAELGEKARLLAEQNAEVERKNQEVEHARQALEEKAHQLALTSKYKSEFLANMSHELRTPLNSLLILSDQLSKNMEGNLSGRQVDFARTIHSSGAELLALINDILDLSKIESGTVVVDVTEVSFMDLHDYVERAFRHVAESRRLGFELEFDGNLPRAVYTDAKRVQQVIKNLLSNAFKFTDKGKVAFQVGMIRSGWDPENETLQRAGAAISMAVTDTGIGIQPDKQQIIFEAFQQADGSTSRKYGGTGLGLAISREIARLLGGELKLRSVPGEGSTFTLLLPLSYAPAKGRKGKEPVSESRPSQPLVSAELALRAPPEPPSHLINQIIDDRTSIEAGDQVVLIVENDVNFARYLMDVAREHGLKVLLAYRGSTALALARERRPGAVTLDLNLPDVDGWRVLARMKHDLETRHIPVHVITTDEDRERALRLGARGVLHKPLKARDELDAAFEQLIQFMKAPKRRVLLVEPDEGERAALTKLLGIDGVEVQHVETGGSAMNALESASPEVVVTRLDLSDMRAFELFDRMARREGQKERPLVLYTPGELSLSDEERIARLGQSLVLKHVRSPERLLDEVSLFLHLPLPALPGSKQELLAELHQSNKVIVGKKVLIVDDDIRNIFAMTTLLEAHQMKTVYAETGKAAIEVLGQTPDVDVVLMDIMMPEMDGYDTMRAIRAEPRFHALPIIALTAKAMKGDREKCLEAGANDYISKPVDTEQLLAALRLWLHR
>NZ_CP012159.1|WP_063796236.1|2104756_2106943_-|response-regulator
MSTPSGRPSGTRVPQSSAPSGAGPVDILIVDDKPDKLLALETILEELGQNIVRAMSGRDALRHVLQQEFAVILLDINMPGMDGFETAELIRQHRTSRHTPIIFVTAFGEEPNALKSYSLGAVDYILAPVDPEVLKTKVGVFVELFKKTAEVKRQAEALQRRAAQLNKLANASIAINASLSLDATLRAITESARDILEAKQAFSVATLGHPGERPRVAVSLAEELAPAFRGYRPALRSTRAPGTGLTRLHDVLYARNRPIRLTEAELKAHPEWQPDEPMGPPLRGVLAAPLTEVTGRNMGFIQLSDRVQGEFTEDDEAILVQLAQLGSIALQNGLNLEAREANRLKDEFLATLSHELRTPLNAILGWTRLLQTSPMDPAKFERGFEVIERNVNAQVRMIEDLLDISRITTGKMKLSVATVELGPLVEAVIDTLRPAAEARGVTLKAEIDGCEIQGDSERLQQVISNLLSNAIKFTPRGGGVDVSLSLGEGEVTLVIHDTGEGINPDFLPFVFERFRQADSTSKRAQGGLGIGLALVRHIVELHGGSVLADSAGQGQGSTFTVRLPSIPSTARSADPALAKPSEDDANTLEGLYVVVVEDEDDTREMLGEVLRRHRAEVTTVASASEALQIISTRRPHVLVTDVAMPNEDGFELIRQLRNLGPKAGGDVPALALTGYARKEDHARALAAGFQMHASKPIEPSELVAAIACLAGGSGIIRALGRPPRFTVP
>NZ_CP012159.1|WP_050429828.1|2104308_2104662_-|hypothetical-protein
MHISSIELLEVLLLLRKSGEREWRPADVAREIGSSMMSIRDRLANLAARDLIATREVDDDLWYHYAPESEVRHVVDELARAYKERRLTIIDMIYARQLPGDIETFSDAFLIRKKDGD
>NZ_CP012159.1|WP_050435774.1|2121130_2123737_+|primosomal-protein-N'
MPSYAVVAVPVPLSQPFHYAIPAHFAAEVRPGARVLCEFGRRRLVGVVLTLSDRAPPVDPTRIKPIAAVVDPEPALPAELLAFLQELAAYYFAPIGEVLRLALPALERDQVKAMSAKGAFGGPLDLARQKQVGGRKVLFACPTDALEPPGTLRGQAAAVLALLRASGEQPVARLEERFKAARAAVKKLAGMGLVTLDERERPRDPFFRLPETPDSPPELNEAQALAAERIDAALAALAPTAGFAVASSPAAGSSAASSPAAGSPAASSSAASSPAASSPAASSPATGSSAASSPAAFLLFGVTGSGKTEVYLRAIATCLAQGRGALMMVPEIALTPQVVARFRARFGDDLAVLHSGLSDADRHAMWTSLRTGRVRVAIGARSALFAPVPDLGLILVDEEHDGSFKQEEGVRYHARDMALLRAYRAGAVCVLGSATPSLESIALVRRGKLTELRLPERAHREATLPEVHLVDLRKFGAGPSGDKLISLPLHRAIEQALKAKDQIILFLNRRGFAPSVVCEACGTVETCASCSVALTYHRGRRAPRATPGPHVASAALSSGQTGELPGLTPPRPPPRGKLLVPPPGHDTDDDHVLRGGRLRCHYCDYTGPLPDRCSACNAPSLALEGLGTERLEATIAESFPEARVGRLDRDVAGADKTEAILNRMRAGEIDILVGTQMVTKGHDLPSVTLVGVVNADAALSIPDFRAAERGFQLLVQVAGRAGRRDRPGRVLIQTRNPQHPAVAFAAAHDVEGFLRRELVDRQEVGYPPYSRLALIRVDAPDEQVARDAIGLLAARARTSPEGLARRVDVLGPSAAPIAKLRNRYRFRVLLRADERGPLRAAVAAVNEAKNSIERSVRIVIDIDPVAML
>NZ_CP012159.1|WP_050429836.1|2124753_2125527_+|hypothetical-protein
MPGISDSAQVDDLKIHLETLLAADNARKLVPQGETTTEQLRRESAVFRPRIRLRLEQVLADLTAQTPGLSNAEVAKLTATRSGRDAVDTGIAALARVDDHLQSVTSERNPLIAKAYGVHGQNPVSFGGVLRSLAMCQKEDDALTLLPVDDLRREHLFTPVVRSAVDTAYTGLRAVLGEREATRGELSRSYAVKQATIDEAVSSIAAARQHLYANLPDRKVDRNLYDYGFRPIHVTTGRRANGSTPDVAEPPASCPMT
>NZ_CP012159.1|WP_050429837.1|2125811_2127914_+|hypothetical-protein
MALGLAALALCGCAPSAPPQARTTPTVLPIRRPPQVAAAAPVWKIETLVDVIPADATVVAHLPRPDALLQRMPPALLDDFSASILSELGTMPGLDTTQIGALATAFDDAVVFVGPSGHDPVDPERRVCSAIRFKDPAPVERLLSLPIFRKTGDERFAIEHEQQKVLAYGAWLKSARVALLCREPKLLSTALRVADQREPSFRTSPLFKPERAEGAWVTMDLARFVGRSPGAPEAGSRLAASFSAEPGAPNIELQFVGHGGRFPPLGALLAPTRHTMITRLPKGPVSAFSVSLQRMPGKTLADLFVAAGSSMETAGVSFTSLMLSGLGLDLPTLDGALGGEVALGLYVDPKRAPEAGKDRVDTIHETSTMLLSVATASEAARQKVFQVALAQAKKKPKRFRVKGNTIIADAENGQELRAELRPGQLLIGTGDRKLVADLFARFGREGETLGASPAFAATRAQTPPEGHLLAYLDPGVLSASIAGVPGIPPSAADRSGALLALTLAPSDRGLEFTATSHGGVSALGDSAALAIFGVQRYLARAKTAEAKSMVTAMFRSAAASFERERLPASLSGSGSPSSIKAVHKLCGAANAVPASVPKGTKYVPSESPGQDFNQGDDDTGWRCLRFAASDAMYYQLDYRAGGGYKGPARGGPDPGKDGFEVSAEGDLDGDGKTSLFTRTGRIVNGELVLDESMFIADELE
>NZ_CP012159.1|WP_050435775.1|2127974_2128538_-|hypothetical-protein
MACPHGLAGCCAAPPAVAWADIGRIVQLGGAGWLLDEIGAGRLRPSPRGLAILRNPPAEVEGRAFPGRCVYLGARGCTIAPERRSATCNYYVCDEALAEGGESEGEPTARAASTARAAGTASEARTAREVHTALMDLYAYGDLEIAEAITSAWPAGPVWNEAFLGWLGTRYEEMLRRRRRQLRRLTP
>NZ_CP012159.1|WP_050429838.1|2128782_2130078_+|6-phosphofructokinase
MSLAKFQPKRVGVVFSGGPAPAANAVISSAASAFRRSGSDMLGFLHGYSGLQDYDAAKRTLVAEQDYHAFTDQDLHGLRNERGIFIGTSRANPGKGIRGPKDLDDPQRTAPLRRVYDGLVSLGVEALVSIGGDDTLKTANFLYEFQRRLPADAPRVRVVHVPKTIDNDYRGIDFTFGFFTAVDVMAQELLNLRADARATKGYFVVETMGRKAGWLAYGVAIAGEAHMVVGVEDVEGALAVQEEIKNETTGAVTKENRLDLDALAERIVDLIVAREARGKHYGTIVLAEGLAELLPESFLRGVARDEHGHVSLGKIDIGKLIAKIAGDRYEARTGKSKKLTGVQLGYESRCSAPHAFDVMLGCQLGLGAFRAIVEEGLDGHMVSTAGQLDLQYVPFAQLVNPETLKTEVRFIERGSDFHRLARDLETRLPGK
>NZ_CP012159.1|WP_050429839.1|2130114_2130801_-|hypothetical-protein
MTPIRVGIICEGTTDDAVLRAIVGALVHPRQVVFALLQPDSDRLQPRTGPGWQGVRKFLKEAPELSASPLDLIVVHVDADVRGSPEVTAHLRAVEEGEHDLEPLCDHVKDWMISGVPDAVVIVLPRERTESWLLAANSKVKHVEAIAEPDRMLPDPGSRGKREKSRPAYEALVQPLLPLLSRRNALRGLPELERFCGKVGSRIRKLSSASGASSRGARGDGGRRGAGG
>NZ_CP012159.1|WP_169796479.1|2130797_2132039_-|AAA-family-ATPase
MFDILKTVTIEGFKSIRKQNLELGYLNVFIGANGSGKTALLEALGVLGAAAAGRVDDAELLRRGVRPGVPRLFKSAFDKSAPNDRLPRVIKLSGASPAGARYDVTLDNPKDSAATPWRFSTETLRFREEKLVTRSPRGANLWKGDKKEPLKLADAYRGIAPVFQTMEVATARVTGMLNRLAEFVIYDPQTAILRGTMADALPLDPLGLQGGRLAEAVGQLLQPKKGLFGSLPLEDLFALIDWASDVDVSAPTPDLVSPSIPAAAEILRFTDKYLRSDLSRLSAYDASEGALYVLFALTLLLHPRTPRLFAVENIDHALHPRLARALVRLLGEQALMARNHKQVLLTTHNPLVLDGLALNNDRIRLFTVDRTTAGHTVVHRVAYTDALEEAQAKGVTLSQMWTRGLLGAVPSIE
>NZ_CP012159.1|WP_050429841.1|2132237_2134079_+|hypothetical-protein
MANPSPSERFRASFARWARRVRRRRALGVVLSGAALGLAVGIGGAAAAWQTRHGALRPFAAAGGLLGAAAGAVLAHRRRWPDTSVALYLDGRLGSKETIATALELDADEGSEPARAVVVSQAEGVLGRATPREVRPRVWRTWHAAIPIAAGAIGYLSWIPLPPLPPEAAAPPGAEQVRLADVTSLERAIALGEANARDEAQRERLKKLAEDAKKLRDKLREGVEKREALADLSKLRDGITAERLSLGAGEERQGMESALGKLGDNPDLKDAAKALGDRDMTSLDEEMERLANKLEKEDRERAQQTLEEAEKAARGAGAQGVAKALEEQRKRLEALGKKSEKLKELAKALGEGLGEEGKQALKDLSQVGDPEDLQQLAESMEKALSGLSAEERKQLAENMKRQAEASPEGAPGEGPSPEEMQDLADQLATPEGIAQLKEQLRQMAQAPPPGSGEGERQKGLEGAQEGTGGLEGQLGGQAMPLPMAGASGQNGSQGGQQGSQGGTNGGGSSGGSGKDQGGATPGHSEGGGPGSHDGQTGKVTGGDLRARAKARMNKGVPMPGMVLGRTAGRPGESANVRGEGALGVVGPDEVGAIDRSEVPEEYREQVGRYFQPK
>NZ_CP012159.1|WP_050429842.1|2134075_2134777_+|STAS/SEC14-domain-containing-protein
MTHHAPFASPPDGLPGPESSIRHAERLAAPESSIRHADGLAAPASTPRHADGLAAPASTPRHADGLAAPESTPLDTAEVEAPASLPPDLPREWYFGRHSMHFEPPDLQVVVLEGEVSADDIQFIADANRPFYEQASLSISLILLKSVAVASPGTRKAVASNPMRPIPHVLAFVGGSFATRVVTTVVLRAANLITPGKTLFAFFDDEKPAREWIDARRRELSSRAATPAASPAP
>NZ_CP012159.1|WP_050429843.1|2134860_2135877_-|hypothetical-protein
MRLSLSLVAAFTLLTAAPDARAQAYRDGPPPEHRIVYRDLTLFRWNPLGLITDGRLTYRYRLYESESVALRDNFISVGVAPSLSGAFARIGPTVEIQPASFLQLWGLYEVIGYFGAFNFLQSFPSAANANYSDSELSRRNGLESGDPLKNYSTTGTQLILGANLQFKVGPVAARNLLRVGRPDMKIRGGDRVFYDIFYDLLVGDGGWWYSNDTDVLVQGLDNSLSVGLRWTTAQALYSDDHFAPGDSRPSAPGAIHRIGPVAAYTFKQPDGAAIEPTLLLVLNWWLKSPYRTGQDVSQGVPYIVAALNITGDLLSPPIKPPKTPSQPEPPPPVPPRAP

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Crispr_ID: NZ_CP012159_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012159_7

2486949-2487070

Orphan

Consensus_repeat	Method
GGGTCAGGCAATCGCCTGACCCTTGGCGTTTTGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP012159_7

>merge|NZ_CP012159|7|2486949-2487070|CRISPRCasFinder
GGGTCAGGCAATCGCCTGACCCTTGGCGTTTTGTGTTCGTGAGATGCGGGCGGCCCAGACCTTGCTCGCCGAACGACCAACCATTCACGGGTCAGGCGATCGCCTGACCCTTGGCGTTTTGT

>NZ_CP012159|7|7|2486949-2487070|CRISPRCasFinder
GGGTCAGGCAATCGCCTGACCCTTGGCGTTTTGT	GTTCGTGAGATGCGGGCGGCCCAGACCTTGCTCGCCGAACGACCAACCATTCAC
GGGTCAGGCGATCGCCTGACCCTTGGCGTTTTGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012159.1\|WP_156338385.1\|2492569_2493664_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050430054.1\|2485418_2485724_+\|50S-ribosomal-protein-L23	unknown	unknown	gnl\|CDD\|235586
NZ_CP012159.1\|WP_082363427.1\|2497591_2498602_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238863
NZ_CP012159.1\|WP_050430053.1\|2484767_2485391_+\|50S-ribosomal-protein-L4	unknown	unknown	gnl\|CDD\|235404
NZ_CP012159.1\|WP_050430060.1\|2495249_2496002_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050430052.1\|2483211_2484402_+\|elongation-factor-Tu	unknown	unknown	gnl\|CDD\|234596
NZ_CP012159.1\|WP_050430061.1\|2496007_2497417_-\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP012159.1\|WP_050430057.1\|2488109_2492195_-\|protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP012159.1\|WP_050430055.1\|2485726_2486557_+\|50S-ribosomal-protein-L2	unknown	unknown	gnl\|CDD\|236488
NZ_CP012159.1\|WP_156338384.1\|2478484_2478826_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_044250896.1\|2484415_2484727_+\|30S-ribosomal-protein-S10	unknown	unknown	gnl\|CDD\|179076
NZ_CP012159.1\|WP_050430051.1\|2481087_2483202_+\|elongation-factor-G	unknown	unknown	gnl\|CDD\|234569
NZ_CP012159.1\|WP_050430062.1\|2499490_2500621_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187573
NZ_CP012159.1\|WP_050430059.1\|2493674_2495192_+\|YkgJ-family-cysteine-cluster-protein	unknown	unknown	gnl\|CDD\|308985
NZ_CP012159.1\|WP_050430050.1\|2480297_2480768_+\|30S-ribosomal-protein-S7	unknown	unknown	gnl\|CDD\|235398
NZ_CP012159.1\|WP_050430049.1\|2479874_2480273_+\|30S-ribosomal-protein-S12	unknown	unknown	gnl\|CDD\|235355
NZ_CP012159.1\|WP_050430056.1\|2486560_2486854_+\|30S-ribosomal-protein-S19	unknown	unknown	gnl\|CDD\|178985
NZ_CP012159.1\|WP_050435808.1\|2487089_2487983_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050430064.1\|2501918_2502290_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_156338386.1\|2501045_2501483_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP012159.1\|WP_082363427.1\|2497591_2498602_-\|hypothetical-protein	gnl\|CDD\|238863	cd01825, SGNH_hydrolase_peri1, SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.	5.6324e-42
NZ_CP012159.1\|WP_050430053.1\|2484767_2485391_+\|50S-ribosomal-protein-L4	gnl\|CDD\|235404	PRK05319, rplD, 50S ribosomal protein L4; Provisional.	1.14162e-94
NZ_CP012159.1\|WP_050430052.1\|2483211_2484402_+\|elongation-factor-Tu	gnl\|CDD\|234596	PRK00049, PRK00049, elongation factor Tu; Reviewed.	0
NZ_CP012159.1\|WP_050430061.1\|2496007_2497417_-\|serine/threonine-protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	4.41549e-96
NZ_CP012159.1\|WP_050430057.1\|2488109_2492195_-\|protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	2.15323e-85
NZ_CP012159.1\|WP_050430055.1\|2485726_2486557_+\|50S-ribosomal-protein-L2	gnl\|CDD\|236488	PRK09374, rplB, 50S ribosomal protein L2; Validated.	0
NZ_CP012159.1\|WP_044250896.1\|2484415_2484727_+\|30S-ribosomal-protein-S10	gnl\|CDD\|179076	PRK00596, rpsJ, 30S ribosomal protein S10; Reviewed.	1.12043e-65
NZ_CP012159.1\|WP_050430051.1\|2481087_2483202_+\|elongation-factor-G	gnl\|CDD\|234569	PRK00007, PRK00007, elongation factor G; Reviewed.	0
NZ_CP012159.1\|WP_050430062.1\|2499490_2500621_-\|SDR-family-oxidoreductase	gnl\|CDD\|187573	cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs. This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	9.80964e-57
NZ_CP012159.1\|WP_050430049.1\|2479874_2480273_+\|30S-ribosomal-protein-S12	gnl\|CDD\|235355	PRK05163, rpsL, 30S ribosomal protein S12; Validated.	6.77991e-80
NZ_CP012159.1\|WP_050430050.1\|2480297_2480768_+\|30S-ribosomal-protein-S7	gnl\|CDD\|235398	PRK05302, PRK05302, 30S ribosomal protein S7; Validated.	5.83428e-104
NZ_CP012159.1\|WP_050430059.1\|2493674_2495192_+\|YkgJ-family-cysteine-cluster-protein	gnl\|CDD\|308985	pfam03692, CxxCxxCC, Putative zinc- or iron-chelating domain. This family of proteins contains 8 conserved cysteines. It has in the past been annotated as being one of the complex of proteins of the flagellar Fli complex. However this was due to a mis-annotation of the original Salmonella LT2 Genbank entry of 'fliB'. With all its conserved cysteines it is possibly a domain that chelates iron or zinc ions.	0.000779109
NZ_CP012159.1\|WP_050430056.1\|2486560_2486854_+\|30S-ribosomal-protein-S19	gnl\|CDD\|178985	PRK00357, rpsS, 30S ribosomal protein S19; Reviewed.	2.90482e-62
NZ_CP012159.1\|WP_050430054.1\|2485418_2485724_+\|50S-ribosomal-protein-L23	gnl\|CDD\|235586	PRK05738, rplW, 50S ribosomal protein L23; Reviewed.	3.17202e-36

>NZ_CP012159.1|WP_050430056.1|2486560_2486854_+|30S-ribosomal-protein-S19
MPRSIKKGPFIDGHLLEKVQAAQATGAKKVIKTWSRRSTILPEAVGLTFAVHNGRKFVPVFVTENMVGHKFGEFAPTRTFHGHSGDKKSKVGKPGGR
>NZ_CP012159.1|WP_050430055.1|2485726_2486557_+|50S-ribosomal-protein-L2
MGIRNFKPTSPGRRFYSVSDFKEITKSEPERSLVEKQSATGGRNNYGRITSRFRGGGHKQRYRVIDFRRDKIGIPAKVASVEYDPNRTARIALLHYADGEKRYILAPDGLVVGSTIVSSRNADIKPGNSLPLRFIPPGTAIHNIEIKLGKGGQLVRSAGVSAQLMAKDGDYAQLRLPSGEIRRVRLDCRATIGQVSNVDHANISLGKAGRTRWLGWRPHNRGVTMNPVDHPMGGGEGRTSGGRHPCSPWGQLSKGLKTRNNKRTDNMIVRRRGTKG
>NZ_CP012159.1|WP_050430054.1|2485418_2485724_+|50S-ribosomal-protein-L23
MQLTPEQIIRRPIILTEKSARLREGDNKVIFEVRREANKIQIKDAIQTLFKVGVLDVNTMVLRGKDKRMGRGYAKLRNWKKAIVTLKAGDEIQFFDEEKAE
>NZ_CP012159.1|WP_050430053.1|2484767_2485391_+|50S-ribosomal-protein-L4
MKVTVYNLKREAVGELDLSDDVFGTEVKEHLFYEVVKAQLASRRAGTKATKERSAVAGSSKKLYRQKGTGRARQGSIRAPHHAGGGHAHALTPQDWSYRPPRKVRIGALKSALSLFAKENRLIVLDTLDLPEIKTKALVTTLETLQVGKKSLVVDSPSNEKLVKSIRNLVEHQFLPPEGVNVYDLLRHDHLVVSREAAKALEARCLR
>NZ_CP012159.1|WP_044250896.1|2484415_2484727_+|30S-ribosomal-protein-S10
MAETTKIRIRLKAFDHQLLDKSTSDIVETAKRTGARVAGPIPLPTEIRRYTVLRGPHVDKKSREQFEIRTHKRLLDIIEPTQQTLDALMKLDLSAGVDVEIKS
>NZ_CP012159.1|WP_050430052.1|2483211_2484402_+|elongation-factor-Tu
MAKEKFNRTKPHVNVGTIGHIDHGKTTLTASIVKVQSKRQMAKAISYADIAKGGTVRDDTKTVTIAAAHVEYESPNRHYAHVDCPGHADYIKNMITGAAQMDGAILVVSALDSVMPQTREHVLLARQVGLNHIVVFLNKCDAVDDPEMLDLVEMEVRELLNKYKFDGDNAPVIRGAALPALQGEAKWEEKIGELLAALDSYIPEPQRDIDKPFLMAVEDVFSIKGRGTVATGRIERGVVKVGEEVQIIGFRDTKKTTVTGVEMFRKLLDQGQAGDNVGCLLRGVEKEEIERGQVLAKPGSITPHTKFTGEVYVLKKEEGGRHTPFFTNYRPQFYIRTTDVTGTVQLPEGVKMVMPGDNITMTIELIAPVALEEQMRFAIREGGKTVGAGVVTKILA
>NZ_CP012159.1|WP_050430051.1|2481087_2483202_+|elongation-factor-G
MARDYSLERTRNIGIMAHIDAGKTTVTERILYYTGVNYKLGEVHEGAATMDWMVQEQERGITITSAATNCFWTPGSGPQKGISHRINIIDTPGHVDFTIEVERSLRVLDGAVAVFDGGNGVEPQSETVWRQADKYGVPRMAFINKMDKVGADFDMCVDSIRERLGANPVAVQYPVGAEDSFRGVIDLISMRAAIYDEQTKGKDFSWETIPSDLLPRCTELREKLIEACADASEQVMEKFIGGDLDGITEDELHAAIRAGTLGFKLVPVLCGSAFRNKGVQQLLDAVTSYLPSPLDIPPVEGTLPDKKDKVVARKASDEEPFAALAFKVMNDQFGTLTFFRVYSGTTKSGASVMNSTRGRRERFGRILRMHANKREEIDICYAGNIYAAVGLRDTYTGDTLCDDKHQIVLERMEFPDPVISIAIEPKTKADLDKLSLSLQKLMNEDPSFRTFTNEETGQTIIAGMGELHLEIIVDRLKREFKVDANVGRPQVAYRESVVGSARKIEGRFVRQSGGHGQYGHVVIDLEPAERGEGFVFVNDIAGGVIPKEFIPSIEKGVRDAMGRGVLAGYPIVDVKVRVFDGSFHEVDSSGPAFEVAGSIAFQEACKVAQIQLLEPMMAVEVVCPESYLGDVIGDLLARRGKVLDIGQRGTARVIKGEVPLAAMFGYATDVRSKTQGRATHTMQFSHYAPVPVTIQDEIVTKQRG
>NZ_CP012159.1|WP_050430050.1|2480297_2480768_+|30S-ribosomal-protein-S7
MPRRREVPKRKIIPDPKHKDKLVAKFTNSLMFSGKKSTAEGILYGAFDIVRDRFKEEPIEIFRKALDNVKPKLEVKSRRVGGATYQVPVEVRPERRVALAMRWLVMYSRGRGEKTMRERLAAELVDAAQNRGNAVKKRDDTHKMAEANKAFAHYRW
>NZ_CP012159.1|WP_050430049.1|2479874_2480273_+|30S-ribosomal-protein-S12
MPTISQLVRLGREATRYKTASPALKSCPQRRGVCVRVYTTTPKKPNSALRKVCRVRLSNQMEVTSYIPGEGHNLQEHSVVLIRGGRVKDLPGVRYHVVRGTLDASGAAGPSSTNKATRNRKRSKYGVKRPKR
>NZ_CP012159.1|WP_156338384.1|2478484_2478826_-|hypothetical-protein
MLLTLAGAAGLVTSGIFLSYGTGRYEIYCDNGYNGAMYQCRNENDVGLVTAGWITLGTGLAAMAVGIPLWVIGGKRVPSKGQTTSGPASAPHPPVTRGMVSFNGSSVSAHFTF
>NZ_CP012159.1|WP_050435808.1|2487089_2487983_-|hypothetical-protein
MKKAQESMKKGVTLYKSKRYNEAIIEFRASYASVPSPNSRFQIARALVALDEPVEAYLEYDGVIEDATARASEGKYAETLEYAVAERDQLAGKVALVTVTVASPEAAKSLLIGGREVPRARWGQPFPAVPGPIDVELSSTAGAPLREEFTLAAGEKKELTLDPAPAAPVDQGVVIETRVPESRRALRPYAYAAGGVGVAGLALFTVAGLMASSTYADLSETCGGRCPPNRQSDVDAGKTQQTLANIGLIVGAAGLAAGATLFVLSITGSEASDAAQTSAGRPQLLLGPGYAGVRGTF
>NZ_CP012159.1|WP_050430057.1|2488109_2492195_-|protein-kinase
MALERSPSAGSPSRLGNYELIKELSGGGAGSVWLARADTAGGGSPPEPVTVFRLFRHLTKKPEIAEGVLREAETARALRAPNIVPIDEARVVEGEVFVVSPYVEGEQLTTVMSAAGINETARGPAAVASAQGVPLGVMLRIAVDVLRALSAAHGGEAPLIHGELSPQHIRIGVDGLTRVGGFGVARAVAPLVPMGSKSHERLAYAAPERVKAMASHTDAVLTPAVDLFPLGVMLWELCAKQRLFASKLEAAIIQKVLTTPIPSLSDMEGIDVPEAVEAVIQKALQRDPARRFESAEAMLAALEEAAGDRLADAKDVAASLEKLVGKAIDARKTMIAAALLGRGGAAGAGGAPASRRRGATLMGVANPLAEGTARGGVGSRVAITAPSPKGGAGAGDASSAGPLEAASAKAAGEEGLDGGWGDDAPARQRLGTLVAFGTPEETSAVIARATSTSEVKTGNQAEGATEASEGGAGPKVPGRAAGKPVVAKALSEEAAPLTPQVPVSPPGAGRASSPSIGGAGRGSSPSIGGTGRGSSPSLGGTGRGSSPSLGGAGRGSSPSLGGTGRGSSPSIGGAGRASSPSIDAAPAAPVAGRAAPTASAAVAGSSSEGERKEGEAPTSAPPNTAKSGELAKAPATGKPLGSKPAATRSSIRPGVLSTAKAAQIKPGFAPPPKLEAPLTRPQPLQSDFPTAMAPLAGADSGRAERTPASNTGGGVTKHTPTGPNNFVRQRGRAASAVDRLGPGSTLGRYEILMPVAKGGMAAVWAARLQGTRGFQKIVAIKTMLPDVSDDPDFQTMFLDEARVAARVRHPNVVEILDLGEESDVLYLVMEWVEGETVGTLQKAAKSLGGVPQRIALRLASQVCAGLQNAHELRDDNGTLLDLVHRDISPANVLISASGFVKIVDFGVAKSKGRLHVTRAGGIVKGKTPYLSPEQLGGLPLDRRSDIFSLGALLYVLATGLHPFRGETEMQTVENIALRNPIPPSELNKAIHPEFEKIILKALEKERAMRWSTCAEMQRAIDQVALQLGQPTTDEDVADFVRQAIGDVLGRRAQDLRDAIYQVDSAGTDSRPSAASPVPAIPTMTSAASEGTPAPPRAAQAAASAIGPSSAHAISSPDLDEEIALEEEPNQDPAEHLPRLVIAPSAQPPPPPPALPIAEVVAEPVAPAAGAQVAPGASDTTTPGRYLAEQDRRKKVQRMVAGAGAVAVGLIVIALLAGKGKESTGTVSPEGTSAAAAATPPVAQDPASLQLPEAVASPPSEPPPPVDVPSQEEKPSAEPAPSAEAVAKELTTSAPVTKAVTPTTKAATTAKAPATAKAPTTTKAPATAKTPTTTKAPTTTKAPTTTKTPTKKSGKPFNPTEI
>NZ_CP012159.1|WP_156338385.1|2492569_2493664_+|hypothetical-protein
MGRLGVVLGLVMGLTTSALLVAMGCATGANNAGVGGGPDGLGGGGGAGPTSGPGGGGVGGILFDGGFEETTPPPPPPLYAHDRTSLFRGDPGIDPLTLTYVGLFDCVGGAGQDGSMTDLAVSAEGEIWGISVNHVYRLDVQGSQVRCVQTIPLNNPGNIQFYGLAFAPKGVIDPNREVLVAGNTAGELWSVDSTGSLARRGTFGVVPPNDGRGHTYASNHVGKRWELSGDIAFAENNGNPLGFVTVRDCPNPPSTTGCNTVDTLLEIDMQALATATTGSVIKSTRGQIVKRAGCNDSISGDYGNMYGIGIFADRVYGLSRYPQDQGGNLVDISNTDGSACLIQSFQLAWYGAGISTIVPVQAPQ
>NZ_CP012159.1|WP_050430059.1|2493674_2495192_+|YkgJ-family-cysteine-cluster-protein
MTSLPSRPRLVDHARARRHLMDGEERVILHDTRTGGRIVLDARTWGLLACADGTRDVEGILTAAAREGAHARIPALRAFLEQLHAAGLIDEGAASTAGVAATTASAAQATPPAPSSADADPPASSPTSPERLLDVLPDFTLHCDGRGSCCRIYPTILFAPAETARARAALPLVLDAGDQPARAFLPEQGTGPCAASAVALDNGRCVYLQEDTRCGIHTAAGATAKPFGCRLYPAALVDDGQRVRVSVLVECSCVLASVDQHDGAPILPGAPRTRADLDPALHITELPRALPITTDASAPRDDVIAWSRALLAAPPPADVPASLWALAAALERSGPCPDAAVRALSDAPPLTPSHLAPWIEALAARVHRRASEDAAFRSPHDLAQRTFVWLAATTRALLLPDLVHLILTAEAPPARRAERFHLRAALHGHQFLGPAPLAHRLRDAATRLIVARAMTLGLATVAGDPDAEPQDDPASEHPLALLEAVLRGHGLAAYASDVDTCHRED
>NZ_CP012159.1|WP_050430060.1|2495249_2496002_-|hypothetical-protein
MTISPRFAGALAAGMLVFTWFMPAALADGSAVTGRDTLALRLKFAEARGLASAGRWADALERFEEIGRARSTPQVTFHLAMCNEQLGRLQEAARLYRKAWEAAQGSDEGVMSEALSRLRALEARMPRIVVHLEGAPEGVTLRVDEARVSATEPVRVDPGPHLVVALRDGAPVAAMALSALEWQTRQVRLRIYPAEGRPQTAGQGDATARVQGAAGHAQATARTQQEAREEQGPRRGRAQSQVAGARVSAR
>NZ_CP012159.1|WP_050430061.1|2496007_2497417_-|serine/threonine-protein-kinase
MLQEDDLAGGRFRLIRPIGSGGMASVWWARHELLGRDVALKLSPLGRDEQVVARFVREAAIIGKFQHRNIVGVVDAGVLREGGYVFLAMELLRGGTFADRLVPGRPMAPSEVLPILIEVCRGLEAAHAAGVVHRDMKPENIFLADVPGQGTVPKIVDFGISQVADSYDTITVDGQLLGTPSYMSPEQARGERHVDARADLWAIGVILYEALSGRQPFKAEGHLAVLWRILDDEPEPLPPTVPIALRTIVARCLKKDRTRRYRDAATLREDLESALDDGMGAPSTMPQPPMAMGTPSPSPSPSPSPSLLDVGRAAMRQMQRSRCMSWGRIGGFGSMFGPGSSVGRAWPALGFCGGVTAAAAMVAAVMHVGQGEAAASTLREAPALHVGLAAAARGAIAGVETLAAAPAALVGAVDAVVAPDGRAAANAEGTLEFVDAVAAEPEERARDEEVRRPPSTGRKRLHTITRPGF
>NZ_CP012159.1|WP_082363427.1|2497591_2498602_-|hypothetical-protein
MWLGDSHGAADFWSGALRSALQKRFGYAGPGFVHLGYTAYRHDGVKHGVGGKWKLRPKGPATSVVTGDGVFGLGGILFVPDGASMAQISLTEPKLTGRLRWDVCYRLNGPNDQVTVALTGSEPVVVKATPDLPPGAVRHLELFGDASATLTVTPTGGAPELCGAVIEADAATRPGVVLDTLGINGARFGTPLAWNEASWAAEFARRSPTLVVLEYGTNEAGDFAADPSRYGRQMTELLTRIRRVTSEVDCLALAPTDRHDTQDRTHLVRDAIRDAAKANGCGFWDTYEIMGGKGSISAWGRETPARAAKDGVHLTRRGYLDLGARLADDVLRGYRP
>NZ_CP012159.1|WP_050430062.1|2499490_2500621_-|SDR-family-oxidoreductase
MAPPGHDSVLLLTGLPSLYARKMVHHVLSAEPRTQIYALVAPRFIAPLTAEVEALGARERVVFLEGDVTSMDLGLSGAELRMLAREVDVIHHMAFTSDVDLDPAAAEALNVLGTAEVLEVARLCSSLSCLVHHSTAFVSGDRRGVVYEDELEHGQGFRSTTEATRMKAEAVMRQAMRDVPIAVVRPTTLVGDSETGEVDRLDGIYVLILMLLAAPSDLALPLPGKGDMALNVVPLDFVAKASRTIGRSAKAAGHTFHLADPQPLSARQVFELLAHAGGRRAPRGHIPSNLAKAMLRAPGIDRFARSPRAFVEQLMTPVRYDMRNTEHALSGTGLECPRFESYVETLVHAVEKHLREERARRQAELERAAEVEDPLS
>NZ_CP012159.1|WP_156338386.1|2501045_2501483_-|hypothetical-protein
MRAVVQAIKDGVKDKTKLADRAELTDRHVDYHRHAARVIGLVDEQNEKWKVTKLGNELLGTTARSPQEAAVLQRAIKGSVLMETVPSLLDVVPPTLDSLAEALTENPGLSPSTARKRARALLAWRAYLREITTEATLDDEPPSEP
>NZ_CP012159.1|WP_050430064.1|2501918_2502290_+|hypothetical-protein
MPIPWTSAQRQTVTSVLCKYPPKSGWCVEATREILPVAREHDVKAGAVRIEPAGRARFVSPKVPLDGEFWFFHVTAEAVAHYVDVLTGCDGTSVDAYFKAHWQVEERDAYRVFSVDLEENGCP

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Crispr_ID: NZ_CP012159_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012159_8

2576543-2576625

Orphan

Consensus_repeat	Method
CTCCGGCCGCATCCTTCGCAGCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP012159_8

>merge|NZ_CP012159|8|2576543-2576625|CRISPRCasFinder
CTCCGGCCGCATCCTTCGCAGCCGCAGCGGACCTCTTCGTCTCACTCGTCCAGGTTTCGTCTCCGGCCGCATCCTCCGCAGCC

>NZ_CP012159|8|8|2576543-2576625|CRISPRCasFinder
CTCCGGCCGCATCCTTCGCAGCC	GCAGCGGACCTCTTCGTCTCACTCGTCCAGGTTTCGT
CTCCGGCCGCATCCTCCGCAGCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012159.1\|WP_156338396.1\|2577610_2577898_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_156338395.1\|2574058_2574649_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050430113.1\|2583091_2585875_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236090
NZ_CP012159.1\|WP_050430117.1\|2594894_2596235_+\|acetyl-ornithine-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|235599
NZ_CP012159.1\|WP_050430114.1\|2585887_2586733_+\|mechanosensitive-ion-channel	unknown	unknown	gnl\|CDD\|366370
NZ_CP012159.1\|WP_169796491.1\|2566993_2568208_+\|VWA-domain-containing-protein	unknown	unknown	gnl\|CDD\|214621
NZ_CP012159.1\|WP_050430099.1\|2565224_2566196_+\|UDP-glucose-4-epimerase-GalE	unknown	unknown	gnl\|CDD\|224012
NZ_CP012159.1\|WP_050430116.1\|2591908_2593261_+\|aminotransferase-class-III-fold-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|235884
NZ_CP012159.1\|WP_169796492.1\|2586775_2590981_-\|metallophosphoesterase	unknown	unknown	gnl\|CDD\|227922
NZ_CP012159.1\|WP_050435818.1\|2572483_2573596_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|274954
NZ_CP012159.1\|WP_050430103.1\|2573623_2573998_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050430112.1\|2581364_2581775_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|371831
NZ_CP012159.1\|WP_050435819.1\|2593322_2594882_+\|aldehyde-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|143442
NZ_CP012159.1\|WP_050430104.1\|2574853_2575444_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050430102.1\|2569730_2572226_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_082362351.1\|2579378_2581352_-\|sigma-54-dependent-Fis-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225114
NZ_CP012159.1\|WP_050430105.1\|2575468_2576059_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_156338394.1\|2568583_2569162_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050435817.1\|2564159_2565149_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227505
NZ_CP012159.1\|WP_050430108.1\|2577978_2579280_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|276965

Protein	Function_ID	Function_description	E-value
NZ_CP012159.1\|WP_050430113.1\|2583091_2585875_+\|hypothetical-protein	gnl\|CDD\|236090	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated.	5.54016e-15
NZ_CP012159.1\|WP_050430117.1\|2594894_2596235_+\|acetyl-ornithine-aminotransferase-family-protein	gnl\|CDD\|235599	PRK05769, PRK05769, acetyl ornithine aminotransferase family protein.	0
NZ_CP012159.1\|WP_050430114.1\|2585887_2586733_+\|mechanosensitive-ion-channel	gnl\|CDD\|366370	pfam00924, MS_channel, Mechanosensitive ion channel. Two members of this protein family of M. jannaschii have been functionally characterized. Both proteins form mechanosensitive (MS) ion channels upon reconstitution into liposomes and functional examination by the patch-clamp technique. Therefore this family are likely to also be MS channel proteins.	8.66437e-25
NZ_CP012159.1\|WP_169796491.1\|2566993_2568208_+\|VWA-domain-containing-protein	gnl\|CDD\|214621	smart00327, VWA, von Willebrand factor (vWF) type A domain. VWA domains in extracellular eukaryotic proteins mediate adhesion via metal ion-dependent adhesion sites (MIDAS). Intracellular VWA domains and homologues in prokaryotes have recently been identified. The proposed VWA domains in integrin beta subunits have recently been substantiated using sequence-based methods.	5.50043e-13
NZ_CP012159.1\|WP_050430099.1\|2565224_2566196_+\|UDP-glucose-4-epimerase-GalE	gnl\|CDD\|224012	COG1087, GalE, UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane].	1.79989e-150
NZ_CP012159.1\|WP_169796492.1\|2586775_2590981_-\|metallophosphoesterase	gnl\|CDD\|227922	COG5635, COG5635, Predicted NTPase (NACHT family) [Signal transduction mechanisms].	9.22299e-39
NZ_CP012159.1\|WP_050435818.1\|2572483_2573596_+\|glycosyltransferase	gnl\|CDD\|274954	TIGR04063, Glycosyl_transferase_group_1, PEP-CTERM/exosortase A-associated glycosyltransferase, Daro_2409 family. PEP-CTERM/exosortase is a protein-sorting system associated with exopolysaccharide production. Members of this protein family are group 1 glycosyltransferases (see pfam00534) in which the overwhelming majority occur in species with the EpsH1 form of exosortase (see TIGR03109), and usually co-clustered with the exosortase. A typical member is Daro_2409 from Dechloromonas aromatica RCB.	1.65306e-122
NZ_CP012159.1\|WP_050430116.1\|2591908_2593261_+\|aminotransferase-class-III-fold-pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|235884	PRK06917, PRK06917, aspartate aminotransferase family protein.	1.39237e-157
NZ_CP012159.1\|WP_050435819.1\|2593322_2594882_+\|aldehyde-dehydrogenase-family-protein	gnl\|CDD\|143442	cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA. Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis.	0
NZ_CP012159.1\|WP_050430112.1\|2581364_2581775_-\|hypothetical-protein	gnl\|CDD\|371831	pfam11981, DUF3482, Domain of unknown function (DUF3482). This presumed domain is functionally uncharacterized. This domain is found in bacteria and eukaryotes. This domain is typically between 289 to 301 amino acids in length. This domain is found associated with pfam01926. The central region of these proteins contains a hydrophobic region that is similar to pfam05433.	0.00188783
NZ_CP012159.1\|WP_082362351.1\|2579378_2581352_-\|sigma-54-dependent-Fis-family-transcriptional-regulator	gnl\|CDD\|225114	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms].	3.36483e-66
NZ_CP012159.1\|WP_050430108.1\|2577978_2579280_+\|hypothetical-protein	gnl\|CDD\|276965	sd00038, Kelch, Kelch repeat. Kelch repeats are 44 to 56 amino acids in length and form a four-stranded beta-sheet corresponding to a single blade of five to seven bladed beta propellers. The Kelch superfamily is a large evolutionary conserved protein family whose members are present throughout the cell and extracellularly, and have diverse activities. Kelch repeats are often in combination with other domains, like BTB and BACK or F-box domains.	9.60241e-09
NZ_CP012159.1\|WP_050435817.1\|2564159_2565149_-\|hypothetical-protein	gnl\|CDD\|227505	COG5178, PRP8, U5 snRNP spliceosome subunit [RNA processing and modification].	0.00579435

>NZ_CP012159.1|WP_050430105.1|2575468_2576059_-|hypothetical-protein
MDAPFLDFSFYVGAGGVRPAIEALVPGLPLGALPEQIHRPGLIGLMEGAEVLQICDEHVVLRTEGDVFCNHLPDNRSRRKRLGRRVYERFVEVADTIRCFYGAILVEYPLETPEQIRRDPRSLAFRDFFVSEESLDAAMVRDVVALAGEEAFVEMRRRGVHVWMIDELNPIHRHLDELDWHQRSSRIAQVLGNALP
>NZ_CP012159.1|WP_050430104.1|2574853_2575444_-|hypothetical-protein
MHAPFLEFSFYVGAAGERPAVEALVPNVPPGELPEKLYAPKLIGVMKGPEILAVYDRLVVLRTKGEAFCFPSCEEKVQPRRLGRIVYKRFVEIVDTISCYYGAILVEYSLETPEELQRDPRSLAFRDFFVSEEVLGSRTVQQIIALAGDDAYVEQRRRGVYISMNKELNPRHRQVAQLDQQERSMRIAMVLGKALP
>NZ_CP012159.1|WP_156338395.1|2574058_2574649_-|hypothetical-protein
MDAPFLDFSFYVGTAGVRPAVEALVPNVPTGALPEELYVPNLIGLIKKPEMLKTRERSIVLRTEGDIFCVSEQETTPRVRRLGRRVYERFVDIADRISCIYGAILIEYPLEEPDKLRKRSRSLAFRDFFLSEASIDAQTIQRVVALAGDGAFVERRKHGVYISMTMDFNPRHRHIERLESQKRSDRIAVVLGGALP
>NZ_CP012159.1|WP_050430103.1|2573623_2573998_+|hypothetical-protein
MFLIKVDRIRALVLCTLWGRIELDEMRRFDTEFGDALTCLQGRNIRINADFRGLKPVAPQIAEILRRRQEHALDCGATKIAEVADSEVLSLQLTRIARESGADRITRRFPTDLAARVWLLDDQA
>NZ_CP012159.1|WP_050435818.1|2572483_2573596_+|glycosyltransferase
MQPAVVTSAQQIGQDAPLDVVSGIPHFRTQPLQGKNPPLVREARLMTALERRIETAIEEWQPDIIHAHSPMLVGLPALYAARRYHLPFVYEVRDLWENASVDRGKFKEDSLPYRATAGAEDVVFKRADATITICEALRNVLAPRVRDPQALHVVANGADSDKFVPRPDSEATRERYGLQGKRIIGYIGTFQPYEGLELLIEAIGEISRDIPDAHLVITGAGGQEEQLKAFTRDRGLGNLVTFTGRVPHDQVYDLYSIASLMAYPRIRTRTTEITTPLKPLEAMSMERPVIVSDVPAMGELVREGETGFTFRAGDVHDLARRCVAVLKDPDHLATIGRNARAWILRERHWQTLLTQYAGIYEQAIVAYRSR
>NZ_CP012159.1|WP_050430102.1|2569730_2572226_-|hypothetical-protein
MRVRASFVSVVAALTSFASLACEPRVTPGPPGSANGPASAEGVQSTKGGVKTAAAPPVVPPPVFEAPPAPPTTPVTTHPRLWIRAEELPRLRARAVESNPIYRDLMSVVAEAKLGMDRGKIPSEGDCTYERVFCESYAELFAFMALVAPVEAERKDYAARAKKILLTIVDRVIAAADKDPLARRGFSTTDRSRWAGESFGLTADWIYPYLSAEEKARVRRVFLKWADDQLNSSTTSFDHPTPIGKLNDPVILQGRPNEGLKKPRYAANNFYTAHMRNLTLLSLAFDPADDPPDHTGQYPRLRDYFANVAGAWLYATDHLLRNDARGGSPPEGFQYGPATLAYVSQTLLAIQTAGEADPARWGQQVHLDGNPFWSEVIPAYVHSLSPAPVQGSAGPTYLASWTGDGERYELWDHIDPFTALALHAQNSGNAARLNALRWLVTHTGPGGEAGISRRARSRFGEVYKRHTINYFLLMDPAVTPKDPRPEMPLEHYGSGRGQIFARTGWDPNAAWLTYQVGWAQIDHQHGDGLAFTFWRGGEWLTKERVGYGAFFVGSDQHNTLAIENDRNRRHDEPFRGGLWRRGSQWGLVHTEDPKLLAKSFGRDYVYTLGDATALYNSTYEKIDDVQHASRSLVWLKPDHLVMYDRAKTGKEGRFKRYFLHTPTMPAVAGNLSTVTTAKGQKLYVSTLLPEQAAIKAFEYKEDPKNWETKAAQQEPMKFTLQVEPKAMPLDARFLHVLQGASGGAAVDATAVVKSKGGTPFAGAVVKETVVMFPVDVGEVAEVRYGVPASVKRHVVTGLVPGGKYAVAKQGGEVTVKPGGDAVADEGGVLVF
>NZ_CP012159.1|WP_156338394.1|2568583_2569162_-|hypothetical-protein
MYILSNNHVLADTNRGKRDDAVLQPGRLDGGRQAHQIGWLRYSQRLEARNNQVDAALASLDSEIDYDITYSGYNLEGVNDEVELGMYAWKVGRTTGLTEGFVSAFDVDNVIVNYSDHDDEPNNLSFDGQIEIKSQPQTTLFFSKGGDSGSLILDEYDHAIGLLFAGSDRTGITYANPIQTVLDSFNAELLLT
>NZ_CP012159.1|WP_169796491.1|2566993_2568208_+|VWA-domain-containing-protein
MNRCSKFLRHACSGFLGLLSMGAVLASTVQGCTSEIAASPCETTFAAECGKSCLDDNGCAAGLHCSAGACTAECTEGGSECQAGITCSPRGRCGDDLGGSGFGDPGGPGDHCPSVNVTFGQVTPTVMLLIDQSGSMNDNFGGDGSRWNVLYDALMNTQNGVVSTLSDEIRFGLALYTSRDGFQGGTCPMITQVDAALGNYESIRQRYQNARPDDETPTGESIDKIVDYLKTVDEAGPRMILLATDGMPDTCAVPNPQNGEPEAIAAARRAHGEGIKTVVLSVGPDVALNHLQDMANAGAGIQNGQASAPYYQALNQTSLIDAFKQIIGGVRACVFTLDGVVTTDDPAQGEVLLDGERLTYNDPDGWRLNNASELELVGNACRRVQEDAQSIKITFPCGTVEVIQ
>NZ_CP012159.1|WP_050430099.1|2565224_2566196_+|UDP-glucose-4-epimerase-GalE
MPSVTLITGGLGFVGSHFVWAAAREGRDVVVLDDGSAGTSPELPEGVEVVRGDIGDRATVGSLIRRRGVDAIVHFAGKIQVGESVTNPALYFDVNVVRALALLEEARVAEVPRILFSSTAAVYGEPEAVPIPEDAPKRPVNPYGASKLTFEHALEAYGRAYGLRWAALRYFNAAGADPSGKLREAHDPETHLIPLMLDAGLGRRPPLTLFGEDYPTRDGTCERDYIHVVDLASAHLKALDRLAAGHAVGPLNLGTGQGSTVREMVDEAERVLGRAVPRSVGPRRAGDPSSLVADPRRAEEVLGWKAQRSDLPTLLEDALRSRT
>NZ_CP012159.1|WP_050435817.1|2564159_2565149_-|hypothetical-protein
MKRNKLLVSAGALALAFGALLLPIQPATPATTSPPAPPPPPKPPALDLSSFSDANPEQPVDLLFIHHSVGGQLLTDSGPGKELIPDTNIYVNHPNGGGLRRKLEAASYKVHEAAYKSAVGDKTDLFDWLPKFRGQMDQVLRVAMHDEMLPEGMKNRVVMFKSCYPNNRFRTMGDAPGNPDGPDLTVWNAKASFQALLPEFAKQKDTLFVYLTAPANVLKNPKVRLWKHLAKRALGKPTDAEIAVDQAALAREFNGWIRSPEGWLKDYPEKNVVVFDFYDVLTDGGSSNFSQYGSEGGTDNHPSSQGNERAAVEFVPFLNRAARRAGIIP
>NZ_CP012159.1|WP_156338396.1|2577610_2577898_+|hypothetical-protein
MNLDAETVVREDGDGDGDTDVRIPGIAFEIGDIEVVSPAHEDVDRETVGVPGDDARMTGDGAIARSGDAIGMGGDAGVTRGDDVAGLLAVRGFSL
>NZ_CP012159.1|WP_050430108.1|2577978_2579280_+|hypothetical-protein
MSHAIRSLCPLLIAGLSLGCVIVKADPSPPSPPEVPDTGPTDPGHEPPLDPEDDPPPEPPGDCDPSIPSGWRSLSSSASAGLTRWLDRQDAIYAWTGSELLVHTGVGGAVYAPATDSWRPMASVGSRLVGAWAWSGDALFVKGVDNDTNAQRWFAYHPATDTWETLPPAPLLDFRGHSAVWSTTTHELLVWGGVEEPNTVDEPYITYDGGAAYDPATGTWRVLAPSSLSGRGFHGAIWNGAAMIVYGGAEGELLPLGDGAAYDPATDAWTSIASPTATLPLAPRASARTFVGGPSGSAAIFWGGNEGPCSHCMPFDRVDGGVYDAATDAWTKIPSLETSPLGSSGLRYQPSVWVGAGRLWVLGGIGGDEGPWGPFDNGVAYDLAAETWSTIPGGHVLGARRAASVVWTGCEAIFYGGLDADSDWLTDGAIYRP
>NZ_CP012159.1|WP_082362351.1|2579378_2581352_-|sigma-54-dependent-Fis-family-transcriptional-regulator
MILIDERLPKEPLHSEVVLHVRRHLRRSLRAGRGTAGDLALLFGLSSDEEKRLKLRRALDSASKIEAAAELIANARTAKPSVISLGHDDEHLDRCRAWLRLRKAEERAFDGIVATDLEMLLELSKARDYATGNTPEVPAGLAIPILIEGETGTGKELVARAIHDIWVREQENKGGFHVVQVSGLPPDLINDELFGHVRGAYTGAQSERPGRLEEADHGTLLIDEIGDLPLAAQVRLLRFLQDQKLSRVGENRERQIQVRILAATWHTLDEDIARGAFRRDLLHRIRVGWLRLPPLRKRRGVFTDVIPELLHKLGQKALPPITRSATEALSLHQWPGNLRELVGVLRLALSSAGGSTVRLEDLPPHLQRPYLEQPLFKRAPGFLCDEADGQGLTAELASWRVKEVARSLDALEAPEAAADIAGLHNFFATIPDASEDHKTVVQHLQHHQELTREQGRLTAIETEWRQIRSAPQLPDEVVRALVEAQQKALTKREAVDLELIELSRSTHLIESPWFKLLSEIREIPVFAQQDLMRILQGFIPMVTLAVSVFPDLIEKVRSFSSKGSILEQMRKALGQTQPSFDEADSATELQEEGTTNESADQDALPTKPRDYSREHWEVVLSHFRSKSSAARFLKMDQKTITSHLRRLDIEERWTGNN
>NZ_CP012159.1|WP_050430112.1|2581364_2581775_-|hypothetical-protein
MHTSSIILSDGQLLFALQQRQAFALRGLQNLVTFRRVMHELVDTAGIRFAFDPETDPRLRDFFLAGGLGAAEGAALGGFIGLAVEALVDVPKFGGVAALLGALIGGLAGVNRVQVGWRVRATLALDQTPEVLVQPL
>NZ_CP012159.1|WP_050430113.1|2583091_2585875_+|hypothetical-protein
MRRGAGWREPRAFVTVVFALASFLCASAGWGIPKAAAQDADPAGAGTAAAAAQGTPPSPAATPPPAAPTPAPVPTVEAARTAEPVPAVEAARTAEPVPVVAPPAASPEPVVEAVRAVEPAPAKAVEPAPTVDPAAADPASTAETSPPADPAAPADSAAPVDEAAAQERRTRVEALAQEAKDVAHGNEAADALLQRVMTELSALRPLVERAIADANAATSADAPTPAWAVEVLADEETLDATRVLLLHRLTHTGRDAALGVDRAGLEQLRAEVWHIETRARWSFARRDALRGELFEAFGDPFNIAALSVRGGLVLVVLVLAALAASKRQRLLDSGRSILLRAVRRPRLQRVVERVHGVVSVLSGPLLFLFLLWGFHWALGPTVMHLHAVALIYDLLVWYAVYRIVIVALERLVAARAGSPSTLFGPPLGGKILSAVRTVGRYALFVAFVRMIVQFVAGPGYLHHAVGRIASLGTLVVIWVLMRRFRDDICDAYLRRHDTGALASAVRATRHKWYGFFVALIAFLSLALAALGRWLRSFLLGFEQSHRLLAFLFRRRLEKRLGANGNDASLSDDPDLPAELLADLPEVPIEDPAKGLDYYPDLDRFEELLAAWKDSPRIGSLLLVGGAGSGKTSWLRAAERAAGDIPSQRIALKQRMLTPEAVVSTLGAALAAPPEALADPHALAAWLRKQPRRLLILDDLEHLFLRGLDTWGAWEAFLDIVEYSAPSMFWLCALAEHPHRFVLFARGEIPVFRAVVELEPWPEEKLGELLGGRVRASGYELSFDDLMTDDEDPDPAAQAAGTERDFRRLIWDYAQGCPRVALHYWLRSLQVAGERRLRVKLFRGPSEDTLEDLGEVERFVLASVVWHDSLTPQEASLSLSFPRLPCEDALAKLLELGVVDDHGGRHRVTTPWQSAVTSFLLRKHLIQP
>NZ_CP012159.1|WP_050430114.1|2585887_2586733_+|mechanosensitive-ion-channel
MEAEDIEGSAKLIETIQAGGVITGLVILLITWFLVRVATSALERTGSRFVHRRLLLHQIATLLRFGMYIGGIVAAIGTSLNLSKEVVLALTGTIAVTIGFALKDLASSILAGLTLIIDRPFQVGDRVQFEDHFGEIKAIGLRSVRLLTEDDLLVTIPNNKFLTEVVASANQGRLDMVVKREFWVSPEQDLDLVKRVVEECITSNRYVFLGQQWSVRMEQVMFPFGAAVRLEAEASILDMKYKQEYEGALTERVLAAFRERKIMLAGPAWPAKAPDSVLSPS
>NZ_CP012159.1|WP_169796492.1|2586775_2590981_-|metallophosphoesterase
MRSPEVPPDALRTFTTDYRERVTDRHAHVRLLGLPPELLHERDLRGIQLDHLFVPLRFVHESGHLGHRSLDELLSTHRSVVVLGDPGMGKTTLLLYLSLVCAGLIPLTRPALEPRVPLFISLRELTMARTDTPDLRFIDHLARSARADLSLPGAHDMHFDAMLRLGQAIVLLDGLDEVGSTAARDRLAQDIRAFQTEYPRAPIWVTSRIHGYTPDIALPSNRFEHVRIASLQDDQIEDFLARWYGIQIPDSPGQRTEQRESLRRAIFRTPGVRRLAGNPLLLTVIAFIHQVVGDLPQDRGRLYEQCIEMLLRSWLDAKRGPADHAERHPFEHLRLHQDRQKDYLAHLALHIQSHPWKARTRLRDDASRGLIDRDEALECLAQRHLASSQRARPHLDLADARDEMRQFLDFIGDRAGLLLERGGGKLSFLHLSFQEYLAAWAFTCAPLEHDNPAFFVKHLGDPAWEEVLLLRLYVVQRRPGGGGDTAFDTIVSALFRSLEKTDAAEGWLTLTRALRDDLEFTARDCRQILDRAVTFWTANPAFFGAWFTALEEVKLFSDVGAKTLAEVLADKQREAPATDAVACLHLEMKLWGLTTQAVDRIRANRHLPELLPHLAVLLDEPELAPLLSEGVTDDVWAAVFAALNGPALYRLTLAWATGARPSPAPAAVRAAIVWMLSKVGDEAASRLNFAATHPDSGLLQYFSQATGLHTLHRLCKVTVPLAGGVSMEPPPGWTPRRPLDTTVHCALLGAARLVTRLQNTDTVEQAAARFLAGWGVTRVLHAPAENSPPTSATHDLAHRFVRHFTHEFSGSIGKLCQLYENQATVDSFGTQLLAEFGRHVGRHVGPAWSDELDVSPAAPAPFRPFSLPRIWLLPDMGDGVLHAHLESQSSLPLLFSSLGQLAACQHLVCFVRYQAARRSDALSVDETTDSWLRHHPLDAQLVAWSWQQHAEDLQRHRGSLRGLEGALALAHAQYAHLMTGLRLDGEGSPWRRLLDGREPGLEDLLDLRRHERVPSEASPSSSATASSSATVSTRTTTPTSHPAPEPLPSPPTLRTEREPLLTWLHVSDVHFGHPTAAHRADQKLVLAKLKADAATFRELGLPRIDAIFVTGDIAWSAQPEQYARAKDWLQDLAGAVRLDLRHVFAVPGNHDVDRQVDRDRATRRLLTSLREGSESLDEALDEAQEREQLTQRQSAYFAFARDLSPACLGAPTPASSRLWWHTPLEGRDGLRVRLIGLNSALLAADNQDQGKLRMGRRQLAETLAEPPSEADELLVVLSHHPATAGWLADQRDVDRELRSVAHLHLAGHVHEHDSEGLWAGGGNGIVRVVAGATHGDPARGDANAEHGYSFGALVDGADGFLRARIYPRRFSDKNRDFRADTENVPKGQSYAEHTIPRLRWR
>NZ_CP012159.1|WP_050430116.1|2591908_2593261_+|aminotransferase-class-III-fold-pyridoxal-phosphate-dependent-enzyme
MAVESVRYPEGHVLLRNLGRTYPVVSHGQGVYLFDRQGKRYLDGSAGALVASVGHGNREVAARVHEQLVQVAYVNGTHFTSEVTEQLAARLCAMAPAGLDRAAFLGSGSEVIEAAIKFARQLWVERGEPQRAKVIARMPSYHGNTLYALSMSGRPHYKRFFGPLLSEVVTTAAPYPYRSGLDDYEREGAAHYARLLEETIVREGAETIAAFIAEPVIGSSAGAAVPPPGYFERVGEICRRHGILMIADEVMCGCGRTGRFFASELLGFSPDLLVLGKGLSGGYVPLSALLVKQAHLEEMRLGSGGFMHAQTYLQAPAMTAAGVAVLDYFERHDVVNHAARMGERLHRRLREVVLPLPHVGSVQGVGLIAGVELVEDEATRRPFPRARKVVEGLLDRLFEEGLILWPNTGHADGTDGDLVMIGPPLTITEGEVDELVEKLAQGITHCLERP
>NZ_CP012159.1|WP_050435819.1|2593322_2594882_+|aldehyde-dehydrogenase-family-protein
MTFRITYSVLDADMTALHAQFDEALAAVRRGLGGVFPSWIGGKAFESGDLLESRNPARPGELLARFHRTPVGEVDRVMRVAREAQRGWGATPWQERARILRKAADLISERRLSLSAIMALEVGKNRLESLGDVEESADLLRYYAGQLEEAQGFVKPLARLSPNEDTRSVLRPYGVFVVIAPFNFPLALAAGMSAGALLGGNAVVLKPSEEAPWCAEGLFHALRDAGLPDGVFQVVHGEGETLGAALVAHPGVDGVAFTGSKSVGYAIHGQLNATRIRPCFLELGGKNPAIVCKDADLEAAIEGCFRSAFGLSGQKCSALSRVYVHESLKQAFLAGLSEKARSARVGDPTEVPTFVGPVIQPASVARFEHAAAEARRDGVVHAGGERLRLAGALSDGYFVAPTVVEIAHGHRLMREELFLPFVGVTGFGALEEALTLANDCAYGLTAGIFSRKDADVAFFLEHAEAGVLYANRRTGATTGAWPGVQAFSGWKGSGSTGKGGCGPYYVAQFMREQSQTRMG
>NZ_CP012159.1|WP_050430117.1|2594894_2596235_+|acetyl-ornithine-aminotransferase-family-protein
MSMLFPEVQVAPPGPRAREIIALDRQYASPSYIKEYPLVVDRGEGPWVYDVDGNRFLDFMAGIAVASTGHAHPHVVSAIKSAAERFLHICGTDFYYDSFAQICARLASYLPAMGPKKVFLTNSGTEAVEGALKLARHHTRRQYVVAFKGGFHGRTYGAISLNSSKVAQRAFFGPLLPGILHIPYANPYRSEGGGDEASHPARLLEKEYFVNHVDPREVAAIFVEPILGEGGYVVPPVGFLEELRRICDEHGILLVFDEVQSGIGRTGKMFAAEHFGVMPDILLSAKGIASGMPLGAIVAKESVMSWPRGSHGSTYGGNPVCCAAALATLDVVEGLLDQVRETGDYLQAGLRALKARHPVIGDVRGVGLMVGAEFVKPGTLEPASAYVGELEQLAFQKGVLLLSCGKSTIRFAPPLVVGKHEVDVLLGVLEACLVELDARHWAAGKV

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Crispr_ID: NZ_CP012159_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012159_9

3101189-3101277

Orphan

Consensus_repeat	Method
TGTCCAGCGCCGCCAGCGCCACTGCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP012159_9

>merge|NZ_CP012159|9|3101189-3101277|CRISPRCasFinder
TGTCCAGCGCCGCCAGCGCCACTGCCGCCAGCGCCACTGCCGCCAGCGCCGGAGGTCGCGCCCTGTCCAGCGCCACCTTGTCCAGCACC

>NZ_CP012159|9|9|3101189-3101277|CRISPRCasFinder
TGTCCAGCGCCGCCAGCGCCACTGCC	GCCAGCGCCACTGCCGCCAGCGCCGGAGGTCGCGCCC
TGTCCAGCGCCACCTTGTCCAGCACC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012159.1\|WP_156338468.1\|3098407_3098686_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050430453.1\|3100051_3100618_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_082362394.1\|3091287_3091548_+\|IS66-family-insertion-sequence-element-accessory-protein-TnpB	unknown	unknown	gnl\|CDD\|377551
NZ_CP012159.1\|WP_050430455.1\|3106441_3109963_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|180777
NZ_CP012159.1\|WP_156338465.1\|3086553_3088176_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|275365
NZ_CP012159.1\|WP_050430449.1\|3089711_3090623_+\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|377694
NZ_CP012159.1\|WP_050430451.1\|3096900_3098100_-\|cytochrome-P450	unknown	unknown	gnl\|CDD\|225035
NZ_CP012159.1\|WP_050430462.1\|3122548_3122845_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050430460.1\|3120622_3120811_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_169796516.1\|3121339_3122530_+\|DUF4374-domain-containing-protein	unknown	unknown	gnl\|CDD\|373002
NZ_CP012159.1\|WP_050430448.1\|3088342_3089392_-\|NAD(P)-dependent-alcohol-dehydrogenase	unknown	unknown	gnl\|CDD\|176186
NZ_CP012159.1\|WP_156338466.1\|3093637_3094465_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_156338467.1\|3094448_3096461_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_156338470.1\|3119443_3120394_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224527
NZ_CP012159.1\|WP_050430458.1\|3115372_3118834_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|164795
NZ_CP012159.1\|WP_050430456.1\|3110421_3111021_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_156338471.1\|3122841_3123105_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050430450.1\|3090820_3091180_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050430457.1\|3111309_3115038_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|374435
NZ_CP012159.1\|WP_082363442.1\|3104675_3106025_-\|cytochrome-c-peroxidase	unknown	unknown	gnl\|CDD\|188554

Protein	Function_ID	Function_description	E-value
NZ_CP012159.1\|WP_169796516.1\|3121339_3122530_+\|DUF4374-domain-containing-protein	gnl\|CDD\|373002	pfam14298, DUF4374, Domain of unknown function (DUF4374). This family of proteins is found in bacteria. Proteins in this family are typically between 406 and 466 amino acids in length.	0.000834177
NZ_CP012159.1\|WP_050430448.1\|3088342_3089392_-\|NAD(P)-dependent-alcohol-dehydrogenase	gnl\|CDD\|176186	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	0
NZ_CP012159.1\|WP_156338470.1\|3119443_3120394_+\|hypothetical-protein	gnl\|CDD\|224527	COG1611, COG1611, Predicted Rossmann fold nucleotide-binding protein [General function prediction only].	6.1271e-06
NZ_CP012159.1\|WP_050430455.1\|3106441_3109963_-\|hypothetical-protein	gnl\|CDD\|180777	PRK06958, PRK06958, single-stranded DNA-binding protein; Provisional.	0.000142778
NZ_CP012159.1\|WP_050430458.1\|3115372_3118834_-\|hypothetical-protein	gnl\|CDD\|164795	PHA00370, III, attachment protein.	2.13956e-05
NZ_CP012159.1\|WP_156338465.1\|3086553_3088176_+\|hypothetical-protein	gnl\|CDD\|275365	sd00001, TSP3, Calcium-binding Thrombospondin type 3 (TSP3) repeat. TSP3 repeats of the vertebrate thrombospondin (TSP)-1,-2,-3,-4 and TSP-5/also known as COMP (cartilage oligomeric matrix protein), and related proteins. These short aspartate-rich repeats are a continuous series of calcium binding sites that can be divided into two sequence motifs: N-type and C-type. N-type and C-type motifs are distinguished by their sequence length, calcium ion binding, and their interactions with water molecules. C-type motifs are higher affinity binding sites compared to N-type motifs.	3.88768e-10
NZ_CP012159.1\|WP_050430449.1\|3089711_3090623_+\|AraC-family-transcriptional-regulator	gnl\|CDD\|377694	pfam06719, AraC_N, AraC-type transcriptional regulator N-terminus. This family represents the N-terminus of bacterial ARAC-type transcriptional regulators. In E. coli, these regulate the L-arabinose operon through sensing the presence of arabinose, and when the sugar is present, transmitting this information from the arabinose-binding domains to the protein's DNA-binding domains. This family might represent the N-terminal arm of the protein, which binds to the C-terminal DNA binding domains to hold them in a state where the protein prefers to loop and remain non-activating. All family members contain the pfam00165 domain.	2.25394e-53
NZ_CP012159.1\|WP_050430451.1\|3096900_3098100_-\|cytochrome-P450	gnl\|CDD\|225035	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism].	2.11183e-90
NZ_CP012159.1\|WP_082362394.1\|3091287_3091548_+\|IS66-family-insertion-sequence-element-accessory-protein-TnpB	gnl\|CDD\|377551	pfam05717, TnpB_IS66, IS66 Orf2 like protein. This protein is found in insertion sequences related to IS66. The function of these proteins is uncertain, but they are probably essential for transposition.	4.52317e-23
NZ_CP012159.1\|WP_050430457.1\|3111309_3115038_-\|hypothetical-protein	gnl\|CDD\|374435	pfam16210, Keratin_2_tail, Keratin type II cytoskeletal 1 tail.	8.66589e-08
NZ_CP012159.1\|WP_082363442.1\|3104675_3106025_-\|cytochrome-c-peroxidase	gnl\|CDD\|188554	TIGR04039, MXAN_0977_Heme2, di-heme enzyme, MXAN_0977 family. This model describes a subfamily of di-heme proteins related to the di-heme cytochrome c peroxidase and to MauG (methylamine utilization G), an enzyme that performs a tryptophan tryptophylquinone modification to the methylamine dehydrogenase light chain.	3.6989e-09

>NZ_CP012159.1|WP_050430453.1|3100051_3100618_+|hypothetical-protein
MTTTLLVKQYAGELTLDLTDLQGSLVDLPSGGMRGLRREKPGWDRAEQELSTRLPLHAAELRVAPDLGTQISTLNTRLARVRAVKRTVEKLAEVAAETEAYLEDQREALVGLVVDSVRKAAKRTDPALMTAFEKTIRYHGQTGLLAAKTRRKNEAATAEEEEAGVPFKGGAALAAAPEGESEDEPQET
>NZ_CP012159.1|WP_156338468.1|3098407_3098686_+|hypothetical-protein
MEGRGPVALAGLPASAWRSRSRASHLGLGGRGKLARKLEVTNVERESTNVERESTNVERESTNVERESTNVERESTNVERESTIGEWGKDEP
>NZ_CP012159.1|WP_050430451.1|3096900_3098100_-|cytochrome-P450
MSEVHLNLLSPEVAVDPFPFYAALRRDSPVCRVEPGGFWAVSRYEDAAAVVADPVRFSSRGVAPAMDPPWLQLEFNAGAHSMVVQDPPEHTRLRSMVNRAFGPALLAATEGPLRALAERLADGLGGGDEVDFVSAFATPLVASVIGGVLGLDPTRHAQFKRWSDVLGSAGPVSQGPEHDELVRSAYREMHRHCDEVIEARRREPGSDLMSALLQIRAGEQALTDRELHSFFHLLFIAGLETTVHLIAKSVMRFADHPEEMARLRAEPAMIPRYLEEMLRYDPSVHFIFRQAPAEATLAGGTIPAGSFILVMLASANRDEARFPKADVFDMDRDTRGHLAFGHGPHTCLGLALARMEARIALETLLTRFQRFERRPGPPEWMHTIIVRGLARLPVRAIPA
>NZ_CP012159.1|WP_156338467.1|3094448_3096461_-|hypothetical-protein
MAALIATIALLVSLKATASNQRLVIPAIPNIISLGANAAHITAVFCADLERNVPKDNSAINHVLTSNSLMIRINQGDWFPLEQELNSSSPKITLEYVDRNSSTHPMGVRFKNLTTDSNIEIKSSSPTVVSEAHEKADTALTNRLKTIEFNKDDQVIQRQIWKDSILQTRTELAQAFGLNASIPSTITDDFILIAQIQFDWLHQMAQLLLEMVGFKPRGDTVNDLREAMTAYQTHQGLPATGRFDRTIIKFMGEDLDTINAATLVLSDSEPPPEFAKLLPRLARVDESHMLIGRADNKLELLEFSITSSNPPQLSRRTLSDSVADEAEALHQERIKRAASKDNNIIWLSARTTAKFNSQNTPVDIIAGSDQKQVFTSPKEITNATTWQDVLVDIRATQARRDIVISLSPVARLAESHGSSFDRGIVNWGDVVSGIRKSCSPPCRLWLDEPTDKVIGKIKSFPSNVSIKDIVGVKPNSSDNVGLMATHLVSDIGHTVSAETFWTSSIKEHTAIVVTGHRSTALSKLLDDYGILGVFQNRVVLLFSCGTNISHQEHARLIRLHGAKAVLAFPSEINAPATRRVLKAIKRKLDTGPQDLNNLVQLATEDALREVEESINELKKRRQGTKSLVEAEHERDELKLILRGTLQLSLRAKSNDSHYASLMRNENEPTL
>NZ_CP012159.1|WP_156338466.1|3093637_3094465_-|hypothetical-protein
MNLRFRLDTPINPELDREHQQLGPAAEAASESFIVEVQPTAAVNLDDLLRIGKWSPFDRESRSFADVWLLFHTLHVSPNERETLSSNPTGPASVALEVEFDDSVRATVLDVFPKTEFVNVAHGKIACSIRLSTNGAGIHSGQIDDNKQDPVYETAAKTQADIEACAELRFQILTSKIISVGVHASKSEWYLYEREQPLFGEHTLAHTVWVPPGTQNISYICRVRAAAGGWRKWFSSPRKPAWGRVQCDLATTLEVPVLDYLLARGIIIKAIDRTE
>NZ_CP012159.1|WP_082362394.1|3091287_3091548_+|IS66-family-insertion-sequence-element-accessory-protein-TnpB
MSGHLFVFLNRRADQVRILFWDRTGYCIVSKRLAQGRFHLAHAVSAGRTHVEMDATELALMLEGLDLSGATRKKRWRLPSPGKLAA
>NZ_CP012159.1|WP_050430450.1|3090820_3091180_+|hypothetical-protein
MATRAEWSERVERWNQSGLSAKAFAGLEGLKVQSLYWWTSRLRTSSGAALQSTPPRFLPVRVVKSPQAQLARVGVAPSPATATVIELALPNGCIVRVQEGFDTTTLARVLRVAGGTGAC
>NZ_CP012159.1|WP_050430449.1|3089711_3090623_+|AraC-family-transcriptional-regulator
MQKRTALVAALADTIARHATPDADTRTPVERLFIGHRSGSTPPAYTLQWPCLTLVVQGAKTITVGTQRLRYDAGDYLLVTRDLPVSSRTVEGSPTRPQLGLALAIDPTVLTQLLARAPLKPTLGEPAPALAVRRADEDLLDALRRLLALLDRPRDIPALAPLHEQEVLYRVLTGPLGPALVRIASDESQSTGVGRALAWLRAHYTEPLRIEDLAHHAGMSVSSLHHRFKAATSLTPLQVQKHLRLHEARRLILVDQLDVGTAGFRVGYQTHAQFSREYRRLYGNPPADDLRRHRPREAVSRRV
>NZ_CP012159.1|WP_050430448.1|3088342_3089392_-|NAD(P)-dependent-alcohol-dehydrogenase
MVKAYAALSATSPLAPFAIERRAPATEDVVIAIHHCGVCHTDIHLTRNDWGTSIYPMVPGHEITGVVTEVGARVTRFRVGDRVGVGCYVDSCTTGEVRDPDREHYQPGVVMTYNARVEGADHPTHGGYSESIVVKEGYVVSIPDALPLDAAAPLLCAGITLYSPLRHWKAGPGKRVAIVGMGGLGHVGVKLAHAMGAHVTVLSQTLAKREDAQRMGADAYHATRDPETFERLAGRFDLVLNTVSGDLDWNAYLNLLATDGALVLLGMPEQPVTVNPFLLVPHRRSLSGSWMGSMRETQEMLDFCGKHGITAEIEAIAIERIGEAYERIVKSDVRYRFVIDMATLADGAR
>NZ_CP012159.1|WP_156338465.1|3086553_3088176_+|hypothetical-protein
MARRESVEVAAAALSDGDRAELLMNRHLERLERDPVGIVTGRVLNVDEAPVSGVIVRVAGNEVMTDDGGKYTLTNVPGGNQVASFEHAEYVFSQRLVAVHPGEHQVLDSYLLGRSQSRRINVDAPVSIRNGPLSLEFEPGDLGFADDGKRGAAAVPISGEVDVVFTTIDPLQKNHILAAPAGLTGITVKGEPVDLVSYAMLEVELFKDGRKVQVRSGQTVRTTLVVDDALAVKSGEIIPMWHHDTDLGVWVQAGGTDAVVQPEKDGSLIAVAELPHFSSWNYDSVGDATCAQFVLPGNQVTRRIRIVSTDSQGAMDHLWSITSECMNSGSSNARCFINVPSGARASTSFKVQAQQAGTNEWCDLTFQMGPIGQRTRFMGADINQWLNNFERPTGSWCGQSIGSPRGGFYLGGTYDIGSFGPPLPPNHVVLGMAQSSCPGVGGLSVSNIDAGFSAMVSNASNPATSANIDRDGAVDAADNCIANSSSQSDVNGNGIGDMCEAWCHVSPAPYAYLYDYDGDGIDDLCDNRWTVFNPSQYLPQ
>NZ_CP012159.1|WP_082363442.1|3104675_3106025_-|cytochrome-c-peroxidase
MLVAVSACGTDPAPSQPTTTVEPLFNEAFQSTNGRSCATCHVPEDNFALTSEHVVRRFETNPNDPLFAAIDADDPTAETLTFDHLKKGLVRVWITLPDNMDQLDEVGNVITAADRRIFVWRSVPSIADAALTAPYQLDGRVETLEEQAQEAITGHSEGGAVSQTDLARIAAFERSIFTSDRARKIADELASGVAFDDLGDVEASLSLSPQEQRGKELYEKTCEACHGGASKTKIKDREIHALAFPALKADGNVLYQVPATDPPTPVLAHEPENEFINIGSAMENFLVQIGATEHQSFTRDVSFPSYRFRFYKDASRTEIVTDLPPALPPDNPFEFAVDDDGNPISGPNFFPQLFTTDPGRAAITGNPYDFEAFDIPTLRGIAKTAPYWHNNISETLEEVVDLYSDHLFSKFPSFTQPGEKEQDPDGDIGPPEAFTANQKKDLVAYLKRL
>NZ_CP012159.1|WP_050430455.1|3106441_3109963_-|hypothetical-protein
MTNPHSETERHLVFRNAFLTALLPSILAACTEPDTTAPPGNLATDDSAPSAVHLGTPLDLGTVMRTVRLAFRPEGHDFTGGGDAYRARVTSSGVEIVPVLHARQRAHRTTDVHVTTSRLPVSRAVTAHEPPEIGAPLTLATTHLARGDRALRGDHAFLGDRAFLGADAPRIERDGHLAIPRGPFAIEHLHNTDEGLSLSYAFASPPEGQGDLTVRLRVGGQRYAGQTSLGHHYRDDATGLGVRVGLATWIDARGTTTPITVHALPEASALELRVPADVLAASAYPAVLDPILSPEDGLDQPLLGQASGAQSHPALAFDGAGYLVAWTDTRTPVESTFATRVTADGTVRDPVGIYLGPGSSPTVAFDGQNYLVVHRALSPEALRGALVSPTDGLLDPQGFTIAAATDATRNPAATFDGTSFLVTWLGGGTHLARVSPTGAVLGLTLLDAGLPVYDGIDARPALASNGANTLVVWQASDRRIHGVRVDPSGTLLDVPPFTIGPPNPGPAGQRTPTVAFDGTSYVVAWKDSAHQHYYNRLEATRVTPQGAVLDPAGILVADEPALDHFYASPEAAFDGQNTVLTFTRGAFEEFAQTLYTTRISPSGAVLDPDGVLLIDAAIDSAIASNGAGAFVVWTDQSTFDWTGGTGIRGTRLANDGSVLDTPSLLLATSGNGQTQPAIAFDGVNHLVVWADDRAYVINERGTDILAARVSPDGTLLDPTGIEIATGIGFQFAPRAVFDGANTLVAWWSFPSYLGGPSDIVYDAEYARISPSGQRLDPTPIRLPLASYDQEPFGLASNGNGALLVADGFDGVQGVLIAQDGTHGPLLDLTSHPGNMFGLRPALASDGDGYLLVWLDLGRSGPLSGARLTAQGQNLDPTGFPISPPGAITHRATLGFDGAQYLVVWENLLNFVGDHGDGSVHAARVTPMGDVLDPQGIVLSPATHLRSNNPVFWTNGPTGTHPATTCKDGHCLVAFRHRTSLTDPLAIDLHATIVDSAGTASPTFVLADQPGIEGPPALSTGPVEAVVAYSRFDAGAPHGAERILNRRIGWIPCTTSATCPEDGTCENDICITTLAAGEGGSTGGGGSTGEGGNAGAGGDAGEGGNVGEGGSSSQGGSSSTSGGDDRSKGGGCSFHGKAPLSAPTAALSFAALSAFITRRRRALSDTAQPQRSRR
>NZ_CP012159.1|WP_050430456.1|3110421_3111021_-|hypothetical-protein
MRMSRDPGAPDNTLRSQPRRLSRRFPAIMVAMAMGTGLCMTGWSSTAAAETVEAAELHPLQAHLESKITDSGARTMLTDVTLQRSGEHAGQLYARTVTSNRVRLTGFTGGVFVVLKNDQGAVVGISGLHTFGVDGRSIGTYRRDEVWIEQIDPRVAAATTQIEIVHQRATRDRLPSILKRIAEFKQAGCQIIHVQGVCD
>NZ_CP012159.1|WP_050430457.1|3111309_3115038_-|hypothetical-protein
MTTPPSRTESRLVHRITLLASLLPAVVSACTGQEPTAPHPASTADDARPSAARTDAPRDLGAVMRTVRLAFRPEGADFTGGGDAYRARVAADGIEVTPVRHARQNAPLTAPERTVDALSAAPNKPLQLGAPLTLATTHLARGHHAFLDAGAPRIERDGHLAIPRGASAVEHLRNTDEGLSLSYSFANPPEGHGDLTVRLRVGGQRYAGQTPLGHHYRDDATGLGVRVGLATWIDARGTTTPVTVHALPGASALELRVPADVLAASAYPAVLDPILSPESGLDQPLLGQASGAQRDPAVAFDGNGYLVAWSDTRTPIESIFATRVSLDGHVLDPHGIDLGPGLAPSVAFDGVNYLVVQNATLTQTFRGTRVSPVSGILDPGGFPIVATNSSTRNPVLTFDGQNFVVAWLAIGAHLARVSPSGTVLDPTGIVIDSAFTPNTGHDPRPALTSDGTNSLLVWQTQDHRIRGVRVSPTGTKLDATPFLIGPPTASSLGQRRPTATFDGQNFVVAWQDSLQEYSQYRIEAARVTPQGTVLDPAAIVVAEEPDPAMYQAHLRAAFDGQNTVLTWTHGEHGHPWASLRRARLAASGTVLDPQGVLFADHTSQSAIVGNGAGVFAVWTDVTTYDMLGGTGIRGTRIASDGTVVDTPNLLLATGSNGQFKPSVAFDGTHYLVVWGDDRAYDTSGRGIDVFGARVTPEGELLDPTGIPIATGPGFQLSPRAIFDGANTLVAWWSTPYPIGGPGDLVFELQYNRVDATGQLLHPTPVTVPILSFNDKIVGAASNGNGTLLVIDEFDGVQGVHIAQDGTHGQPLSLVYYPDSWYGLWPKVASDGNGYLLVWRSNSRKGPLRGARITAQGLNLDPAGFPITPQGAIAHTMDIGFDGTNYLVVWENLLNYSDVGDNGDGSVHAARITPQGGVLAPQGFVISPATHLRADTPLLWTNLTSGTHPATTCIPGRCLVAWRHRTSTTDPLAIDLHAAIVDSSGTVSPSFVLADQPGVEGPPALCAGPVEAVVAYSRFDAHAPHSAERILTRRIGWIPCVTSDTCPADGLCDEGVCVSPVATGQGGSGGQGGSAGQGGSAGQGGSTGQGGSAGQGGSAGQGGSAGQGGSMGQGGSTGQGGSMGQGGSMGLGGSTGQGGSMGLGGSMGQGGSSGQSGSMGQGGSTGQGGSTGQGGSAGEGGGAGKGGSTETPGNDAGCGCRIDGRASRSSGGALLSFAALGLLVARRRRSITSPRAADMTPIP
>NZ_CP012159.1|WP_050430458.1|3115372_3118834_-|hypothetical-protein
MTNHHPGAEPKLVLRTAFLIALLPSALAACTAPETTAPPDGTPGPDTSAPTSARTDAPLDLGAIMRTVRLAFRPEGDAFTGRGDAYRARVSSDGFEVTPIRHARHSAPLNAHVHTAHAPRAAAHEPPQLGAPLTLATTHITRGDHAFLGAGAPRVEGDGHLAIPRGPAAVEHLHNTDEGLSLSYTFANPPEGQGDLTVRLRIGGQRYAGQTPLGHHYRDDATGLGVRVGLATWIDARGTTTPVTVHALPDASALELRVPADVLAASSYPAVLDPILSPEAGLDQPLLGQASGAQSHPAIAFDGSGYLVAWTDTRTPVESTFATRVAADGTIRDPVGIFLGPGSSPTIAFDGTRYLIVHKAPNPQALRGALVSPVDGLLDPQGFTIASATDATRNPAATFDGTNFVVAWVGGGTHLARVSPTGTVLGLTLLDSGPPAYNSFDTRPALASDGANTLVVWQASDRRIHGVRVAPSGTRLDVPSLTIGPPNPGPSGQRTPTVAFDGANYVIAWLDSSSEYSNHRIEATRVTPQGTVLDPTGILVASEPDIHLRFESPEAAFDGQNTVLTWPRGPFWDGGLSLYTTRLSPSGTVHDPDGVLLAEAASDSAIASSGAGAFVVWTDQTTPEGTGGTAIRGARLASDGSTIDDPSLLLSTSGNGQTQPAIAFDGVNHLVVWADDRAYDTAWSGTDIIGARVSPTGELLDPAGITIGTGYGFQFAPRTVFDGANMLVAWWNLRDDLSVPGDYVHEPEYARVSPAGELLDPTPIRLPLGSYEPDAIALASNGDGALLAIDAFDGVQGVRIAQDGTHGPVLDLVSHPENWYGLRPGLASDGDGYLLVWLNDGSNGPLHGARLTAQGQRLNAIDFPISPPGDIAHRASLAFNGENYLVVWESLLNVVGHLGDGAVHAARVTPTGDVLDPQGIVISPATNLRSGTGWWRNHPTGTRPATTCNDGHCLVAWRHRTSLTDPLAIDLHAAVVDSAGAVSPPFVLADQPGVEGAPALSAGPVEALVAYSRFDAQPPHGAERILSRRVGWIPCTTSDSCPEDGICEEGVCVTTLASGEGGGTGEGGSAGEGGSTGEGGSAGEGGSTGEGGTTGQGGSPSGSGGADVDSGCSCSFLGKAPLSAPAAALSFAALSALVARRRRPLRDASPGQR
>NZ_CP012159.1|WP_156338470.1|3119443_3120394_+|hypothetical-protein
MPGFDLPYEPMRRRLYTPADLFQGFDPANSASFAHTVDFAIYQHYVEQGRTAPENPYVGMVQAMHDNTITRAKTLFTAGRRVAAIMGGHKMSRTSPRYRDVAVMARRLTRQGILLCTGGGPGAMEASHLGASLADGSDLDLDAALAILSKQPTVPALADIVAADGSVDPACVELAHAWFAPAFEVASAIRAPHESLAIPTWHYGHEPSTPFATHIGKYFQNSIREDGLLALAKQGIIYAEGKAGTIQEIFQDGAQNYYRTFEYFSPMVLFGATYWTETYPVVAVLQKLFGPEDYEKYVLVTDDVDAATHFVERFVP
>NZ_CP012159.1|WP_050430460.1|3120622_3120811_+|hypothetical-protein
MHPPQKEPFSTIIDVNVPLRWASRVQPGSWVAVVLDRQDARKVSLNVEAFADPAPAPPTSAR
>NZ_CP012159.1|WP_169796516.1|3121339_3122530_+|DUF4374-domain-containing-protein
MSLVGSLAGGTLGCSDAGRDGVSTEPAAELYSVGSIVQSPEGRTLLVQTLRSLDEDTTNENALEFAGNSRHWAHGGAVFIGLDEEPTIEKYVPDEAGVLQPSGRVSFLSFGLTSIPAGNIFLAENKAYLMAEGVYKIIVWNPSTMEIDGEIDLAPLKREGFDIEIYYPNRAGNRVYTPLRYVNFAAGEILHEVGLVQIDTDGDVVVADAHDDRCVGASQPAIADDGTLYVLADGRSYLAQLYATQRMTPPPKNCILRILPGETTFDPDFYTEIQAITGGKEVVTPLWYAGGGVGVAKMFYPDQIPPGTDTSGYKLWYQPAFKLWRIELGDTVRAEEVPGAPFSMNAFGGVTLDGRVFIGETEDGATSTIYEVDPDESRIQSHFVMEGLMRDLYKLR
>NZ_CP012159.1|WP_050430462.1|3122548_3122845_+|hypothetical-protein
MGTALLLTGVSLLYGALSEQTPARHPWMRLAGALLCVGGTCAFAWSHGPGAGVASALALIMAWLSLLALVVPLSPKRSWLVVEVVLAGLWLYVVGSWA
>NZ_CP012159.1|WP_156338471.1|3122841_3123105_+|hypothetical-protein
MKVEGGRRWAHVTVALLGAPLTAFVLVVVLTTLMPGSPDVRLLTAMLSVFPVMAAAACLAWWSRSSGRAWVICFALIAFSLLVHRLK

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Crispr_ID: NZ_CP012159_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012159_10

3383823-3384053

Orphan

Consensus_repeat	Method
CGCCGACGNACCCAGTTTCGC	CRT

5 spacers

The CRISPR arrays of NZ_CP012159_10

>merge|NZ_CP012159|10|3383823-3384053|CRT
CGCCGACGCACCCAGTTTCGCGCCGAGAGCCCACCCGTCAGCCGCCGACGCACCCAGTTTCGCCGCGCGACCCCGGGGCTCACGCCGACGTACCCAGTTTCGCTGGAAACCGAGGACGTCGGCCGCCGACGCACCCAGTTTCGCGCCGAAACCGTCCCCGTGAGGGGTCGCCGACGGGGGCAGTTTCGCGCCAGCACCGCGAACGTCGGCCGCCGACGCACCCAGTTTCGC

>NZ_CP012159|10|1|3383823-3384053|CRT
CGCCGACGCACCCAGTTTCGC	GCCGAGAGCCCACCCGTCAGC
CGCCGACGCACCCAGTTTCGC	CGCGCGACCCCGGGGCTCA
CGCCGACGTACCCAGTTTCGC	TGGAAACCGAGGACGTCGGC
CGCCGACGCACCCAGTTTCGC	GCCGAAACCGTCCCCGTGAGGGGT
CGCCGACGGGGGCAGTTTCGC	GCCAGCACCGCGAACGTCGGC
CGCCGACGCACCCAGTTTCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012159.1\|WP_050430631.1\|3372206_3373961_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|226968
NZ_CP012159.1\|WP_050435867.1\|3382715_3383702_+\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381302
NZ_CP012159.1\|WP_050430634.1\|3376777_3377821_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238866
NZ_CP012159.1\|WP_156338525.1\|3397514_3399101_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223021
NZ_CP012159.1\|WP_156338522.1\|3380104_3380266_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050430635.1\|3377836_3378715_-\|phytanoyl-CoA-dioxygenase-family-protein	unknown	unknown	gnl\|CDD\|368580
NZ_CP012159.1\|WP_050430632.1\|3373957_3375658_-\|cyclic-peptide-export-ABC-transporter	unknown	unknown	gnl\|CDD\|226968
NZ_CP012159.1\|WP_050430643.1\|3389557_3390925_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227511
NZ_CP012159.1\|WP_156338523.1\|3386459_3387560_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225720
NZ_CP012159.1\|WP_050430644.1\|3391223_3392591_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227511
NZ_CP012159.1\|WP_050430633.1\|3375715_3376645_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050430636.1\|3378732_3379662_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050430647.1\|3395801_3397238_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227511
NZ_CP012159.1\|WP_082362425.1\|3387998_3389471_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227511
NZ_CP012159.1\|WP_050430645.1\|3392705_3394160_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227511
NZ_CP012159.1\|WP_050430638.1\|3382023_3382488_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050430637.1\|3380265_3382002_+\|carbamoyltransferase	unknown	unknown	gnl\|CDD\|225103
NZ_CP012159.1\|WP_050430639.1\|3384586_3385357_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_156338524.1\|3394218_3395670_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227511
NZ_CP012159.1\|WP_050430640.1\|3385353_3386262_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225720

Protein	Function_ID	Function_description	E-value
NZ_CP012159.1\|WP_050430631.1\|3372206_3373961_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|226968	COG4615, PvdE, ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism].	5.25984e-86
NZ_CP012159.1\|WP_050435867.1\|3382715_3383702_+\|aldo/keto-reductase	gnl\|CDD\|381302	cd19076, AKR_AKR13A_13D, AKR13A and AKR13D families of aldo-keto reductase (AKR). Schizosaccharomyces pombe aldo-keto reductase YakC is a founding member of aldo-keto reductase family 13 member A1 (AKR13A1). It catalyzes the reversible reduction of ketones to the respective alcohols using NADP(+) as a hydride donor. Rauvolfia serpentina PR is a founding member of aldo-keto reductase family 13 member D1 (AKR13D1). It catalyzes the NADPH-dependent reduction of the aldehyde perakine to yield the alcohol raucaffrinoline in the biosynthetic pathway of ajmaline in Rauvolfia, a key step in indole alkaloid biosynthesis. This family also includes Arabidopsis thaliana aldo-keto reductases, ALKR1-6.	0
NZ_CP012159.1\|WP_050430634.1\|3376777_3377821_-\|hypothetical-protein	gnl\|CDD\|238866	cd01828, sialate_O-acetylesterase_like2, sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.	4.37391e-05
NZ_CP012159.1\|WP_156338525.1\|3397514_3399101_-\|hypothetical-protein	gnl\|CDD\|223021	PHA03247, PHA03247, large tegument protein UL36; Provisional.	1.15937e-10
NZ_CP012159.1\|WP_050430640.1\|3385353_3386262_+\|hypothetical-protein	gnl\|CDD\|225720	COG3179, COG3179, Predicted chitinase [General function prediction only].	3.13725e-32
NZ_CP012159.1\|WP_050430635.1\|3377836_3378715_-\|phytanoyl-CoA-dioxygenase-family-protein	gnl\|CDD\|368580	pfam05721, PhyH, Phytanoyl-CoA dioxygenase (PhyH). This family is made up of several eukaryotic phytanoyl-CoA dioxygenase (PhyH) proteins, ectoine hydroxylases and a number of bacterial deoxygenases. PhyH is a peroxisomal enzyme catalyzing the first step of phytanic acid alpha-oxidation. PhyH deficiency causes Refsum's disease (RD) which is an inherited neurological syndrome biochemically characterized by the accumulation of phytanic acid in plasma and tissues.	1.64163e-15
NZ_CP012159.1\|WP_156338523.1\|3386459_3387560_+\|hypothetical-protein	gnl\|CDD\|225720	COG3179, COG3179, Predicted chitinase [General function prediction only].	1.30803e-32
NZ_CP012159.1\|WP_050430643.1\|3389557_3390925_+\|hypothetical-protein	gnl\|CDD\|227511	COG5184, ATS1, Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell division and chromosome partitioning / Cytoskeleton].	3.34087e-29
NZ_CP012159.1\|WP_050430632.1\|3373957_3375658_-\|cyclic-peptide-export-ABC-transporter	gnl\|CDD\|226968	COG4615, PvdE, ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism].	1.33178e-88
NZ_CP012159.1\|WP_050430644.1\|3391223_3392591_+\|hypothetical-protein	gnl\|CDD\|227511	COG5184, ATS1, Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell division and chromosome partitioning / Cytoskeleton].	3.708e-32
NZ_CP012159.1\|WP_082362425.1\|3387998_3389471_+\|hypothetical-protein	gnl\|CDD\|227511	COG5184, ATS1, Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell division and chromosome partitioning / Cytoskeleton].	8.78161e-25
NZ_CP012159.1\|WP_050430647.1\|3395801_3397238_+\|hypothetical-protein	gnl\|CDD\|227511	COG5184, ATS1, Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell division and chromosome partitioning / Cytoskeleton].	1.61091e-22
NZ_CP012159.1\|WP_050430645.1\|3392705_3394160_+\|hypothetical-protein	gnl\|CDD\|227511	COG5184, ATS1, Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell division and chromosome partitioning / Cytoskeleton].	9.03449e-24
NZ_CP012159.1\|WP_050430637.1\|3380265_3382002_+\|carbamoyltransferase	gnl\|CDD\|225103	COG2192, COG2192, Predicted carbamoyl transferase, NodU family [Posttranslational modification, protein turnover, chaperones].	0
NZ_CP012159.1\|WP_156338524.1\|3394218_3395670_+\|hypothetical-protein	gnl\|CDD\|227511	COG5184, ATS1, Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell division and chromosome partitioning / Cytoskeleton].	1.05528e-25

>NZ_CP012159.1|WP_050435867.1|3382715_3383702_+|aldo/keto-reductase
MLTKRKLGTQGLEVSAIGLGCMGMSQSYGAADEQESIATLHRALELGVTFLDTAEVYGPFVNEELLGRALVGKRDQVVLATKFGFRIEGGKMAGLDSRPAHIREVAEASLRRLNTDHIDLFYQHRVDPNVAMEDVAGAVGELVREGKVRFFGLSEAGERNLRRAHAAFPVSALQSEYSLWERNLESAILPALRALGIGLVPFSPLGRGFLTGHVKRAEEYPEGDFRRGDPRFQGANYDANVRAAQVVRDLAAQKGGTPGQIALAWLLHKGDDVVPIPGTKRRSYLEENVGAARLRLSAEEMQKLDEALRPEAIAGPRYNEKLMATIDR
>NZ_CP012159.1|WP_050430638.1|3382023_3382488_+|hypothetical-protein
MAEEVAEIILPASTWILFFDASCSINSPAFWSTNDAVDRIWRLKIAHELVLLQVVLEGYFKVRCILRSSAPAFEMVNADVSELVSIVLPSGRLVACTTDEPTLNRHVLTVPPGRYRVLREWSVHEESKHYDVESAEAYPADEGPDGIITLWPER
>NZ_CP012159.1|WP_050430637.1|3380265_3382002_+|carbamoyltransferase
MRILGLSAYYHDAAAALLSDGDLVTTVTEEIFTRKKHDASFPARAVAYCLEQGGITARDLDHVVFYEDTRLKFDRLLASIVSTAPRSLPQFVRAIPQWLGDKLWTERNIRRDLGYDGKLHVVEHHASHAASAFLCSPFEEAAILTVDGVGEWATATMGVGRGPSISIQREIRFPHSLGLLYSAFTHYLGFKVNSAEYKVMGLAPYGEPTFDAQFREIIDVAEDGSFRLDMKYFRYHYALDMTHPRLHALFGGPPRRDDEPLTQRHKDIAASLQRVVDTVMVRLARALHRETGLTKLCLAGGVALNCVANGHILRETPMKELFIQPAASDAGGALGAALYAQHALLGQPRSFTFRNPFLGPSYTDEEIETYLRSVGATYEKLSREDLLETTAKLIEEQHVIGWFQGKMEWGPRALGARSILGDARSASMRDTINLKIKFREGFRPFAPTVLAEHVSAWFELDCESPYMLLVAQVRPSHRTIPAVTHVDGSARVQSIERSMNPLYYDLVETFHRRTGTPIIINTSFNVRGEPIVMSPQHAHECFMRTDMDDLILGSFWLKKSAQKALPHIVRGDGAFAPD
>NZ_CP012159.1|WP_156338522.1|3380104_3380266_+|hypothetical-protein
MMVRTLQRFALTLLYFTLLVPCALVVRVLGRAPLRIHPEATGGSYWLPSRRRS
>NZ_CP012159.1|WP_050430636.1|3378732_3379662_-|hypothetical-protein
MDVLEYFERLKNRELAFVLDDLQLSDMVTRRGFSVIPFDDFDLAREDHPPAFVLVTRLDYHGKLMQAWETAKGISSHLSLAKFDTSPKSVEYSLDQLLSMDFAETLKRRGDYYDSVASTNRMEVVTPGAVLTCDFGNEIEIANNDVEMQKGWLYSVAEFFETSVINLEADRSSYTLNGDLCFTGLIYLCNRPDLKERASATMDELMRMSTRGRNVVSFVDNQIVRMELGGVDMTATLRELIVGKEREGSSTEFAMGCVEYPLAQDWTINSVMNEGSHGIHVGVGMGKEIPHMDFIAKGAELRIAESSDA
>NZ_CP012159.1|WP_050430635.1|3377836_3378715_-|phytanoyl-CoA-dioxygenase-family-protein
MHLTATDLHVDFSGDLEAALAKARHLYATFGGFVAARLFDAADLTPIHEELGRLIALAAREVDGFSLPSPRTRFDEGFHALHEEAPAAADAVIQAARRLTTVHELSVNPRLLSVSRRLMGTELVMSNPYKPIRVDYAEREHFLLPWHQDYPYAQDSMDAVVHWIPLQDVDEQNGCLKVAPGSHELGVVPVKMILPPEGSTHGIRGLQIADPSVVERFPQVSLPMKFGDVLVFSTLLLHRSQLNLTGEARWTAQVRHGNFEHPLSVQKRWPRGHYERHWFDETHPEYVRPAGS
>NZ_CP012159.1|WP_050430634.1|3376777_3377821_-|hypothetical-protein
MASTTLETRDELTPQMKEYDRAGRVWVPYLNYFHRPNHRSPVVNTDSRGFRFVVGKDGRTFSEFEREPGERVRALVGGSTVFGVGATGDAATLPSLLSQRGPARWLNFGGRAFSSTQELMLFLFHARSLGALEKVTLLSGVNNLLLFYLSRDYAKDYGSFFSATEVRRAFAGDAPSPAKSGVIGRLKSIAGGRRAKVEAPEPEIVLPIVDHDAQKTDLLHAIERDLSTWKLLSGALQFELCYVLQPLAGWVRKKPSPEETRLFADLDDQQGEAWRQILREKMDLAQYAWFSKSLADICRTQEIPFLDMNATLSALDLDGRWIFVDRVHLTDEGNEVLTQALVEGGAT
>NZ_CP012159.1|WP_050430633.1|3375715_3376645_-|hypothetical-protein
MNASDFYALLRGRGMPVVVDDAEAAAVVSELGFRTVPFEAFDFDSPSEDPALVIVAQMGNVDALHGLWERSGTPLMHLALAKFDGGLSRLRAGLARVLAVDTDAALKRRAEAYEQLFSSASVEIASGEGVLRCHIGDEVEVGNCGDTLEQGFLYSVAEFLEASVVNLEGERSTFWVEGELPFDGFIHLSNSAALKERWGGMLDEFMRRSREGANLVRFADNVIDRLVVGGVDVTSALAGLSQGEERGMAATEFGLGCADAEAAEPFGVNSLLHKSAGGAYIGIGKGLRIPHIDFIARGATIRFIPAAEG
>NZ_CP012159.1|WP_050430632.1|3373957_3375658_-|cyclic-peptide-export-ABC-transporter
MAEHQPGSLSDNVASLWSLVRSGPGEGRRQVAIDLAIAAISDVIVLYSINEVIRVYRDGGFPTREMFLFGVAASASIISFARVLRVVSQSYNRVLSRMTLQILDKTRHVDLAQFEALGGASILARLTTDVDRVLGAGALLMGVLKSAGLVILAFLYFMMRSVEAAVFGFGALALLTAMTVHKGATLRKGFQRAEVVKAELLAIGAGLVRGIKQVKVHRGRREAILADVREHATKLSSEQAETFRRYYAEDALGFAFFFSLQAFIVIGFPILFSTDATTTGELVMTVWYISGAMGMVFKNQPELAAASAALARVRALESQLDASGATPATAATAATAAEPAIDDHLVEGFTSLGVHGLTYRYRTPGEVGAPRRGFQVGPLEATIPRGDIVFVTGNNGSGKSTFLKLLTGLYAPDAGTLSCDGHTLPRVAPEAYRNLFGVILSDFVVFERLYGMEDVDPARVTALLEEMEIAHKVSFAAGRFSTVELSTGQRKRLAMVVALLQDRPILVLDEWAADQDPAFRATFYRKLLPALKRKGKTVIAVTHDEQYFSVADRRLAFRDGKLVSEA
>NZ_CP012159.1|WP_050430631.1|3372206_3373961_-|ATP-binding-cassette-domain-containing-protein
MIPALRILDRKERRQAVRFAVCLTASSVLMTGVLTLVAQALGATPGSESHRTLVITFVIAIVAIYTLLRVGAGGLMAQLQHALASLRVRVTRQIVSAELRAVEEAGEASAAHTQQVEQVSIFFGQGVAFLQMATMLVPGLLYVMLTSLSSAVAVAVTGVLTLPMLAAEFAKSRAATRQMSNDRASFNALLGQMLEGFKQIKLDERTGNAVLADLKERSQRVTEGRLRLDAAMGREVLGSSGFIHLVTALILFVIPSNSTPDPASLFSVALMLYMMVGPVIFFASQTHVLTSANLAYERLVELGGKLRPDPALEAERTEAEGMGAEGTGAEDAEAEHAEAIRAAAARAAAEQVDATPMAFERITLHGVSFTYGKAKEPSFTVGPIDLELRRGEIVFITGGNGSGKTTLMKTLCGLYPPGTGSIQVDERRIGAHDLERYRALFTAIFSDQHLFPKPYGIRAEPDRVRALLKRFGLEHVTRFEDGRFTKLALSSGQAKRLSMVIALLEDRPIFLLDEWAAHQDPELRRYYYTELLPELRAQGKSILAVSHDDQFFGVADRQIALENGQIRAVADGEGLPAGADTPSG
>NZ_CP012159.1|WP_050430639.1|3384586_3385357_+|hypothetical-protein
MLRISKAQVEAFKPIALADFETQMVAHSERFSPTLSSVLGKDQLRVVVRSAVEVASRYGFTFTGPVRLFIELGFLFGSGFHADPQYPWAHEFLADPDPQTQMPRAQELHARSVEAMDRINGPGDLYLDAAFERIRAFGEDIPMVRPVEVPTVALSAMCEVHPEKAAFVGEPALRALIEAGEVEAKERGIYEGRDIVLLLTLMFAFGRGCTDDPLYPWISRTLSNERIPDPARRVRQLHRKALTWVRAVLENKRRAS
>NZ_CP012159.1|WP_050430640.1|3385353_3386262_+|hypothetical-protein
MSGSNTPTNPGVASGGSPIVLPDQVPLPVPRPVREGEQTPTSPNAGDEATSEVDSTVAACPNGCPRCCAKITTQQVKDMWPSAASERIEGTKDAFNEFFEKFEINTCLRKAHFFAQVMKEVGPKIRLVESLDYTPAALKSTFSYYRNNPDMADLHGRVPPDQAADQEAIGNHAYGSNSQLGNDSIESGNGYKYRGRGYIQVTGKYNYEQAQKHIDSEYPGSGVDIVTNPETLGEYRTGMIASMAYWKAKKINLKADMGSTGDDVDRVTEIVNKHTKTYADRRKNFEDTTKVVFKVAECPNHP
>NZ_CP012159.1|WP_156338523.1|3386459_3387560_+|hypothetical-protein
MSGSRTPTSPSAGVGASTPISTPAQVPLPTPRPDLAVPQLPDSVPLPRPRPDLPSAAAPGAGAGDPVASAPGAGAAGAGDGAAAATGDGAGAQAPTSPAAGADAEAPADSPVNSCPLGCPRCKAKITKEQMKEIFTSAADDKLQGITDAFNEAFEKFEINTCLRKSHFFAQIREEVGPSITTLAENMNYSVEGLKSTFKYFRDNPNEAALYGRSPGKPADQQAIANRAYANRIGNGNIASGDGWQFRGKGYIQLTGRSNYQNVQTEIDSKYPGSGIDIMQNEGDILTVRGGMISAMAYWTMNNLNIKADMGARDEDVNRITAVVNFHTKSYADRRTHFKQTRKTFKLSQCPNFEGHGESLLERLKD
>NZ_CP012159.1|WP_082362425.1|3387998_3389471_+|hypothetical-protein
MRGRGWMRFTGLAAIAWAAAACGSTVSTEPKPPVVEEEEEPPPLPPGMCRDGRPAAPVIEEGCAEEPLPEEDGSTCVRTIYSLGLGDEHTCAMVSGGRVKCWGAGEALGLGDVEDRGDEPGEMGGCLPTVDLGSDLPVTRLTAGAKHSCALLEDGTVRCWGNNERGELGLGDRASRGRAPLEMGKNLRAVDLGTDAVVLGVRAGRAHTCAVLRDSLLKCWGENGQGQLGLGDRRDRGGEPGDMGDNLPTVDLGQGERLVGLAVGGDHTCVWMVSGRLKCWGANGAGQLGLGDDTNRGEKGWQMGDSLPAVNLGTDERITLVATGLYHTCALFEGGSVKCWGGDHAGALGVSGTHGDRPESMGDNLPVVNLGAGKKAVSIAAGDHRTCALLDDGSVKCWGANYDGELGLGDRKDRGYEPEDMGDGLPAVDLGTGAVATGIRMRGKHTCVWLRGGDLKCWGVNTRGQLGLGHAAPRGTAKRRMGDALPAVEL
>NZ_CP012159.1|WP_050430643.1|3389557_3390925_+|hypothetical-protein
MRLLNGVLVVVLAGVVTVAAGCGEDRDVCDSSCDAVIDVSLGGSHSCAILEGGRLKCWGAVQDGQEGFTDTDLLGDEPGEMGDSLPVVDLGRDREVVAVAAGGGHTCALLRGGDVKCWGDNRFGQLGLGDSRSRGDGPGEMGNRLPVVDLGRGKTAVALVAGWAHTCALLSEGTVKCWGENRFGQLGLGDVEHRGDDADDMGDALPEVDLGAGAEVVSLAAGSAHTCALLRGGEVKCWGYNGYYQLGIGDYGDRGGAEGEMGNRLPRVDLGTGQVAVALAAGQDHTCALLREGKLKCWGTNDARQLGFEDSMYAGGSAKTMGDNLPVVEVGAGEVIARVVAGSYHTCAQMVSGVVRCWGSNGAGQLGLGREDHQLAFMDEEGARLPPVNLGEGARAVWIRSGSDHVCAGLHDGSFKCWGNNGSGQLGLGDMNSRGLLPEDMGDRLPTVQVGAGRK
>NZ_CP012159.1|WP_050430644.1|3391223_3392591_+|hypothetical-protein
MNDVLIVVLGGMAVLGAGCGESRDVCDGSCDAVVDVVDVSLGGFHSCAILNGGRLKCWGDNFVGQLGLGDREFRGDEPGEMGGRLPLVDLGITGEVVAVAAGAAHTCALLREGTVKCWGSNRHGQLGLGDTASRGDEPGEMGDRLPVVDLGRGKKAIAIAAGIAHTCALLSEGTVKCWGDNRHGQLGLGDVEERGDEAGEMGDELPEVSLGAGATVLSVVTGGEHTCALLQGGAVKCWGKNDYNQLGFDTFYNRGDQVAEMGGYLPRVNLGTGQVAVALAAGNDHTCAQLREGTLKCWGTNSSGQLGFGGYSGIGSREETMGDILPLVEVRPGEAIVSVVAGAYHTCALLTSGVVQCWGANFYGQVGVGREDERLHFTGAEGDRLPAVNLGENAQGVWVRVGTTHTCAGLQDGTFKCWGANAGGQLGMGDERDRGHLPEDMGEGLPAVKVVSEGR
>NZ_CP012159.1|WP_050430645.1|3392705_3394160_+|hypothetical-protein
MRVSFVLVALLGATAAGCGQVNERSQASPDALCADGPSAVDEGGETCAPADALAGTCVPVCGVRDVGVGTGYSCAVLHDGRVKCWGYNDVGTLGLGSRAVVGDEPGEMGGGLAAVDLGMGNSATAIAAGYLHVCALLDSGAVKCWGQNHAGTLGLGDERNRGELPGQMGDALPPVDLGRGKVAVALAAAAFSTCAVLSDGTVKCWGAGPLGIPLLDDNWHRGDEPGEMGDHLPTVDLGEGRAVVSLVAGYGHYCALLSNSTVKCWGYNDHGQLGQGDTASRGAGEREMGSWLLPVRLGTGKTAMSIAAGGAHTCAVLNDGAVKCWGNNWSGQLGLVDEASRGDEAGEMGDDLPEVDLGPGKTAVAIVAGERHTCALLSDGAVTCWGYNESGVLGRGRDYSVSYGAAPGEMGEGLRRVELGAGEEVTLLRTGWEHTCARLGRGNIKCWGGNYSGELGLGDTRPRGVYRSDMGDDLPAVKLYSERW
>NZ_CP012159.1|WP_156338524.1|3394218_3395670_+|hypothetical-protein
MYSANAGGLRDGVQTAGRDGEEGSMRCWTRLFFVGFVGVAGLLAVGCGAAEEEGGETQEVDECSPACAKAVDVAAGWSHTCAVLDDGRVKCWGDNWVGQLGIGDTRTRGEGPGQMGTRLPAAELGTGSAAVAVAAGAWHSCALLHGGSVKCWGFNEYGQLGVGDYRNRGNDPGEMGDALPAVDLGAGKTATAIVAGAWHSCALLHDGGVKCWGDNQSGQLGLGDVEARGDDAGEMGDGLPAVDLGAGQAAVAIAAGEAHTCALLGDGGVKCWGDNRSGRLGLGDVEARGDDAGEMGDSLPAVDLGAGQAAVAIAAGEAHTCALLGDQSVKCWGYSRYGRLGTGKDDRGVEPEQMGDELPRVDMGGSKKSMGLSVGWAHSCVLMKEGGIKCWGHNGSGQLGIGDEVDHGEARWGMSDSLPFVNVGAGEVPVLVRAGSSHTCALLGEGRLKCWGENMSGQLGLGDTVPRGVTAEDMGDALPAVKL
>NZ_CP012159.1|WP_050430647.1|3395801_3397238_+|hypothetical-protein
MRRQKGQGAGRVARVVGFAGLAVFLAGCGAIVIRDLGPEDEAPSDGCGEGSTRDEGCEVPEAARALDVTPGYAHTCALLVDGAVKCWGEGSAGQLGLGDAVPRGDDPGEMGDDLPAVSLGTGETVEALAAGSFHHCALLRGGRVKCWGGNASGSLGLGDGEGRGLDVGSMGENLPTVDLGTGVTAVALVAGGETNCALLPDRTLKCWGDNGYGQLGLGDVTPRGNLPGTMGDDLPAVDLGVDGAGTAVFMGAAHVCALLTRGAVKCWGANGHGQLGLGDADHRGDAPGEMGDALPDVDLGAGNLVAALALGRMHSCALLKDGSVKCWGDNERGQLGLGDTELRGDAPGEMGDALPRVDLGSGKRAVAITAGDLHTCALLDDGSLKCWGDSYWGQLGLGDREARGDEPGEMGDALPGVNLGTGEAAVLVRAGSHHTCVRLSGGHIKCWGYNDGRLGLGDIADRGMTPETMGDGLPIVAL
>NZ_CP012159.1|WP_156338525.1|3397514_3399101_-|hypothetical-protein
MKQSKRAAAKAPTPPDAATFLAETEQIANELSWPFESFGEINDFTVASGALIATDPTYEKLIWSYDTDTTIATCMLVARDAVTPARQSAVLKLCALVNDGLSFGCLDFALDDGTLALRDHADLHFGPLDQVLRRATGRLLSVAQQLAPALRGTLTGKKPEAALLDAQQAEEEAAEQDATEEVPASPAPTSKKTASKSTASKSTPAVKPAPRKPASKSTPAVKPAPRKPASKSTPVTKSAPQKPASKAPASSQAAETKATPRKPASKAPPSKSVVATKATPRKTTSKTAPKTEASKPAAAAKATPREAASKTTSSKTTSAAKGTSRKAAPVSKATPPGSAKVTKASPAKSAAPRAASPQKSPTPPKATTSNKVASPSAGEPTNTKVWLFSLEELPGFRHQNRKVIDALSPACSTMPLMLFLQPEGETRTPTGDLFERIPEKGVCSATEGKKLFGLIEKLESLIEKHCDGYFYDNVATDQVVASQAIHDSSTLDEVGRALTKQGVRVERTEFVASYLIAGGLGWLLEPRP

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Crispr_ID: NZ_CP012159_11

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012159_11

3417421-3417564

Orphan

Consensus_repeat	Method
GCTCGGCGGGATGACGCTGGGCGA	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP012159_11

>merge|NZ_CP012159|11|3417421-3417564|CRISPRCasFinder
GAAAGGCGGGATGCCGCTGGAAGGGATGCCGCTGGAAGGGATGCCGCTGGAGGGGATTCCGCTGGAGGGGACGACGCTGGGCGATACGTTGCTCGGCGGGATGACGCTGGGCGACAAATTGCTCGGAGGGATGACGCTGGGTGA

>NZ_CP012159|11|10|3417421-3417564|CRISPRCasFinder
GAAAGGCGGGATGCCGCTGGAAGG	GATGCCGCTGGAAGGGATGCCGCTGGAGGGGATTCC
GCTGGAGGGGACGACGCTGGGCGA	TACGTTGCTCGGCGGGATGACGCTGGGCGACAAATT
GCTCGGAGGGATGACGCTGGGTGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012159.1\|WP_050430666.1\|3421498_3422056_+\|ribosome-recycling-factor	unknown	unknown	gnl\|CDD\|178850
NZ_CP012159.1\|WP_050430668.1\|3426372_3428004_+\|S8-family-peptidase	unknown	unknown	gnl\|CDD\|173790
NZ_CP012159.1\|WP_156338527.1\|3413528_3413771_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050430658.1\|3411471_3411912_+\|response-regulator	unknown	unknown	gnl\|CDD\|381108
NZ_CP012159.1\|WP_050430653.1\|3403814_3405464_+\|benzoyl-CoA-dihydrodiol-lyase	unknown	unknown	gnl\|CDD\|181274
NZ_CP012159.1\|WP_156339312.1\|3408410_3409721_+\|extracellular-solute-binding-protein	unknown	unknown	gnl\|CDD\|270242
NZ_CP012159.1\|WP_050430655.1\|3406989_3408225_+\|benzoyl-CoA-2,3-epoxidase-subunit-BoxA	unknown	unknown	gnl\|CDD\|132268
NZ_CP012159.1\|WP_156338528.1\|3413754_3414744_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|223543
NZ_CP012159.1\|WP_050430657.1\|3409723_3411133_-\|response-regulator	unknown	unknown	gnl\|CDD\|226702
NZ_CP012159.1\|WP_050430670.1\|3430257_3430578_+\|HNH-endonuclease	unknown	unknown	gnl\|CDD\|366837
NZ_CP012159.1\|WP_050435869.1\|3425042_3425894_-\|protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP012159.1\|WP_050430662.1\|3414748_3416686_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224706
NZ_CP012159.1\|WP_156338530.1\|3423189_3423774_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050430665.1\|3419759_3421238_-\|sigma-54-dependent-Fis-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225114
NZ_CP012159.1\|WP_179955534.1\|3428542_3430036_+\|matrixin-family-metalloprotease	unknown	unknown	gnl\|CDD\|239806
NZ_CP012159.1\|WP_082362429.1\|3422136_3423108_+\|Stp1/IreP-family-PP2C-type-Ser/Thr-phosphatase	unknown	unknown	gnl\|CDD\|223704
NZ_CP012159.1\|WP_050430659.1\|3411917_3413315_+\|protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP012159.1\|WP_050430654.1\|3405509_3406937_+\|benzoyl-CoA-2,3-epoxidase-subunit-BoxB	unknown	unknown	gnl\|CDD\|200253
NZ_CP012159.1\|WP_050430664.1\|3418202_3419717_-\|redoxin-domain-containing-protein	unknown	unknown	gnl\|CDD\|270916
NZ_CP012159.1\|WP_050435868.1\|3423853_3425029_-\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|223699

Protein	Function_ID	Function_description	E-value
NZ_CP012159.1\|WP_050430666.1\|3421498_3422056_+\|ribosome-recycling-factor	gnl\|CDD\|178850	PRK00083, frr, ribosome recycling factor; Reviewed.	7.31232e-88
NZ_CP012159.1\|WP_050430668.1\|3426372_3428004_+\|S8-family-peptidase	gnl\|CDD\|173790	cd04077, Peptidases_S8_PCSK9_ProteinaseK_like, Peptidase S8 family domain in ProteinaseK-like proteins. The peptidase S8 or Subtilase clan of proteases have a Asp/His/Ser catalytic triad that is not homologous to trypsin. This CD contains several members of this clan including: PCSK9 (Proprotein convertase subtilisin/kexin type 9), Proteinase_K, Proteinase_T, and other subtilisin-like serine proteases. PCSK9 posttranslationally regulates hepatic low-density lipoprotein receptors (LDLRs) by binding to LDLRs on the cell surface, leading to their degradation. The binding site of PCSK9 has been localized to the epidermal growth factor-like repeat A (EGF-A) domain of the LDLR. Characterized Proteinases K are secreted endopeptidases with a high degree of sequence conservation. Proteinases K are not substrate-specific and function in a wide variety of species in different pathways. It can hydrolyze keratin and other proteins with subtilisin-like specificity. The number of calcium-binding motifs found in these differ. Proteinase T is a novel proteinase from the fungus Tritirachium album Limber. The amino acid sequence of proteinase T as deduced from the nucleotide sequence is about 56% identical to that of proteinase K.	7.36816e-128
NZ_CP012159.1\|WP_050430658.1\|3411471_3411912_+\|response-regulator	gnl\|CDD\|381108	cd17557, REC_Rcp-like, phosphoacceptor receiver (REC) domain of cyanobacterial phytochrome response regulator Rcp and similar domains. This family is composed of response regulators (RRs) that are members of phytochrome-associated, light-sensing two-component signal transduction pathways such as Synechocystis sp. Rcp1, Tolypothrix sp. RcpA, and Agrobacterium tumefaciens bacteriophytochrome response regulator AtBRR. They are stand-alone RRs containing only a REC domain with no output/effector domain. The REC domain itself functions as an effector domain. Also included in this family us Methanosaeta harundinacea methanogenesis regulatory protein FilR2, also a stand-alone RR. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	1.67418e-68
NZ_CP012159.1\|WP_050430653.1\|3403814_3405464_+\|benzoyl-CoA-dihydrodiol-lyase	gnl\|CDD\|181274	PRK08184, PRK08184, benzoyl-CoA-dihydrodiol lyase; Provisional.	0
NZ_CP012159.1\|WP_156339312.1\|3408410_3409721_+\|extracellular-solute-binding-protein	gnl\|CDD\|270242	cd13524, PBP2_Thiaminase_I, Thiaminase-I has high structural homology to the type 2 periplasmic binding proteins of active transport systems. Thiaminase-I, a thiamin-(vitamin B1) degrading enzyme, is a monomer in its biologically active form, with two distinct globular domains (N- and C-domains) separated by a deep groove. It has a structural topology similar to the periplasmic substrate-domains of ABC-type transport systems, such as thiamin-binding protein (TbpA), that possess the type 2 periplasmic binding protein fold. The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea.	4.77833e-87
NZ_CP012159.1\|WP_050430655.1\|3406989_3408225_+\|benzoyl-CoA-2,3-epoxidase-subunit-BoxA	gnl\|CDD\|132268	TIGR03224, benzo_boxA, benzoyl-CoA oxygenase/reductase, BoxA protein. Members of this protein family are BoxA, the A component of the BoxAB benzoyl-CoA oxygenase/reductase. This oxygen-requiring enzyme acts in an aerobic pathway of benzoate catabolism via coenzyme A ligation. BoxA is a homodimeric iron-sulphur-flavoprotein and acts as an NADPH-dependent reductase for BoxB. [Energy metabolism, Other].	0
NZ_CP012159.1\|WP_050430664.1\|3418202_3419717_-\|redoxin-domain-containing-protein	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	8.76998e-88
NZ_CP012159.1\|WP_050430657.1\|3409723_3411133_-\|response-regulator	gnl\|CDD\|226702	COG4251, COG4251, Bacteriophytochrome (light-regulated signal transduction histidine kinase) [Signal transduction mechanisms].	3.34931e-80
NZ_CP012159.1\|WP_050430670.1\|3430257_3430578_+\|HNH-endonuclease	gnl\|CDD\|366837	pfam01844, HNH, HNH endonuclease. His-Asn-His (HNH) proteins are a very common family of small nucleic acid-binding proteins that are generally associated with endonuclease activity.	0.00143968
NZ_CP012159.1\|WP_050435869.1\|3425042_3425894_-\|protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	9.11277e-32
NZ_CP012159.1\|WP_050430662.1\|3414748_3416686_+\|hypothetical-protein	gnl\|CDD\|224706	COG1793, CDC9, ATP-dependent DNA ligase [DNA replication, recombination, and repair].	3.23706e-41
NZ_CP012159.1\|WP_050430665.1\|3419759_3421238_-\|sigma-54-dependent-Fis-family-transcriptional-regulator	gnl\|CDD\|225114	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms].	6.07228e-145
NZ_CP012159.1\|WP_179955534.1\|3428542_3430036_+\|matrixin-family-metalloprotease	gnl\|CDD\|239806	cd04279, ZnMc_MMP_like_1, Zinc-dependent metalloprotease; MMP_like sub-family 1. A group of bacterial, archaeal, and fungal metalloproteinase domains similar to matrix metalloproteinases and astacin.	8.18245e-25
NZ_CP012159.1\|WP_082362429.1\|3422136_3423108_+\|Stp1/IreP-family-PP2C-type-Ser/Thr-phosphatase	gnl\|CDD\|223704	COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms].	3.07984e-76
NZ_CP012159.1\|WP_050430659.1\|3411917_3413315_+\|protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	1.58065e-101
NZ_CP012159.1\|WP_050430654.1\|3405509_3406937_+\|benzoyl-CoA-2,3-epoxidase-subunit-BoxB	gnl\|CDD\|200253	TIGR03225, benzo_boxB, benzoyl-CoA oxygenase, B subunit. Members of this protein family are BoxB, the B subunit of benzoyl-CoA oxygenase. This oxygen-requiring enzyme acts in an aerobic pathway of benzoate catabolism via coenzyme A ligation. [Energy metabolism, Other].	0
NZ_CP012159.1\|WP_156338528.1\|3413754_3414744_+\|AAA-family-ATPase	gnl\|CDD\|223543	COG0467, RAD55, RecA-superfamily ATPases implicated in signal transduction [Signal transduction mechanisms].	2.60179e-09
NZ_CP012159.1\|WP_050435868.1\|3423853_3425029_-\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|223699	COG0626, MetC, Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism].	0

>NZ_CP012159.1|WP_050430662.1|3414748_3416686_+|hypothetical-protein
MKIVQSDDVRGWFTRTAPLSELLRSIGERQLEGSYIERVVGMPLHLRFLVERLSRERLAQGKSPDVPAAALDSIPFHALCTGFFLPLSVMAPERAVQLFGLRVPPPPDTAGREALLGKLLGKNLGLSAEQKIACILGDPFMGRPSTFRRDSLVRLLMSVQLIGWREVLDQLSAVGDVAVLFAASRPNPIGQPPLTAAEVLEVLRLLPDERRNAKFEILRALFGRCGKVEAYFLAKLLLRKAGFGFDYQGPLIARMLGGAYGASEELVSHAMALTDAFHVARVLSQEGAAGLKKIQLQPLVPVRPALASGSTDELKKFPVWVERKYDGIRLMLHKSTDARGSMLCGAYTRNRGDWLELVPGLDMTIKSLPAQNAIVDGELHGTVIDLAGPRPATVYEVYAALQGERATPVSLKYAAFDVIYLNGRDLTGLPLSERRTWLSMLVTPVSGMPLPVPVGMADGQLATTRDDVSRLYHHFRAQRYEGIVVKDLEGRYRLAERDPSWLKRKPEITLDLVLIGALPAVTTKERVGAFGSYVIAARGAEGFEDVGDVAGVDRERDAEIQGEILREGLLTGRRIERKSASGARAGYELRPHIVVTVKFEGIARDSEGRLTLRDPKIAMLRADKPASEADSVKALEEVYLRQRVG
>NZ_CP012159.1|WP_156338528.1|3413754_3414744_+|AAA-family-ATPase
MGGNPMMAMMQMMQMMMGGGMVAPSVDPAAVPFAGASAAADAGAGLDADIIRPALIVDRIKTQEAVKLGSVLDVLCLTEDGKNALGGVPKGCTIALAGPPGKGKTRSALSGMARVAREGHKVAFVIAEEGFHDEAGSGRDDLCSRMTKIGMAATQLDEETFAKEVLENVFVLESQYHKGQSWDDFVGKYRYLVEKENIRFVVIDSLNMLDPTKNRTADNLSALKTYNHAKGITCICIGQIRDTGLPVGGEALQHTADVVLLIEEMSLGSKEQAEQWGGKYREKIDVISAVKSVTTPIFPFPIRIGRASGTGLMSVHPAQPADYAVLPAR
>NZ_CP012159.1|WP_156338527.1|3413528_3413771_-|hypothetical-protein
MGFPPMGIPIPGIIPGIIPGAIPGIIPGAIPPGIIPGVIPGIIPGAIPPGIIPGVIPGIIPGAIPPGIMPGGMPIPGGIA
>NZ_CP012159.1|WP_050430659.1|3411917_3413315_+|protein-kinase
MDGPVINVLLVEDNPADARLLREMVAEAVASDLVVTHVDRVALALKAIGEQCFDVVLLDLSLPDSFGFEGFVKIHTAAPTLPLVILSNLDDEALALRAVQEGAQDYLPKGRIKGPALVRAVRYAVERGRREAAQLASVVAQAGVTPVSAVVPSSGGRLVPAGGAVGQAQTVRATPRPHADNLPTGTRIGNYSITGRIGRGGMGVVYEAENTILRRKVAIKVMPDALAKDPDALRRFQREARAAAQIDHPNVVGIYDIGEWEGAYFIAMPLVRGGSVQALLSAGGPLHWRQATEVAADVCRGLAAAHAAGVVHRDIKPDNILIGTDGVVRIVDFGLAQAVASNDSLSSSSDGQGIVAGTLHYMSPEQCQGQRVGPASDIYSLGAAYHAMLVGKPPYEGDSKRILWGHCFCSPPHAHSLNATVPEVCTEIIRRAMAREPMSRFESVERMLGDLERALFEESPVNVAS
>NZ_CP012159.1|WP_050430658.1|3411471_3411912_+|response-regulator
MSHGERHFDILLIDDSPSDARLVREALEGRAARCRLSVAANGVEGVAFLRREGKYVTAPRPDLILLDLNLPMKNGAEVLQEIKADEALMHIPVVVLSSSASQEDVQRAYGLHANCYVTKPGDLDCFIQVIRTIEDFWLTTVQLSND
>NZ_CP012159.1|WP_050430657.1|3409723_3411133_-|response-regulator
MPRVLIVEDSPTQAAEIEITLSQEGFDITRTPDAESALARLREEHFDLVLSDIIMPGLSGYDLCRAIKSDPVLSDVPVLLLTSLNDVTDILQGLESGADNYVTKPCDVRHLAGRIHQTLAERAIRARRVGPDDMLFRGQHFRVSSDKQQILGFLLSAFEDFARAKTNEQESRLAAEAARVREELLRAEKEHEVALARTLAQRIDERTAELLRMNEQLQREIAERKLAELQLAMKATELARSNAELEQFARAASHDLQEPLRTVMSYAQLLARRYQGRLDADADDFLRFITAGTSRMQALVQGLLELSRLGSAPAARHPVDVNALLDEALDNLQAAISESGVTVTRAHLPTLTADPRQIVQLFQNLIGNAVKYRGEAPPRVHIDASRTEEGDWLFSVRDNGIGFNPRYADRIFALFQRLHTPDEYPGTGIGLSLCKKIVERHGGHMRAESAPGEGAIFYFTLPGGPDGHR
>NZ_CP012159.1|WP_156339312.1|3408410_3409721_+|extracellular-solute-binding-protein
MACVAWMVSSLGCASEDDGSSQGNGGSGATGGQGGAGGQGGTGGQGGGSDERIRLRVPLYPYIPDAAGDRFEAMVRRMKREFETLHPEVELELNPPCFQDDPYDPAALARGMSGENEACSFDLVEIDTSLLGELVDTGAVTPWSALPSRNWHPAAIEASTYQGALYGVPHWMCSHFVFSRSAAVANASSVSELVSALADLQTPEPDMAGNLLGSWNLPALYLDAWADTNGAGGVASAISATALDPQAISGLKMFSETCESGGLNPCLDGTFDAEDVIDPAMAKFSAGQVDAAFGFSERLFPILKALPVGADPAEIEISSAPLGHGSHPLVFTDSFMLSARCTGACADAAAAFVAYMSEATTFEWVLSSEDAPAQGRVPRYLMPAALEAYATPKLSQDRFYMTIESLMQDGVNYPNSGLYPVKNAMRDNLLDALTSP
>NZ_CP012159.1|WP_050430655.1|3406989_3408225_+|benzoyl-CoA-2,3-epoxidase-subunit-BoxA
MSVHLEVIKQHLIDPEICIRCNTCEETCPIGAISHDGNNYVVDASICNLCMACVSPCPTGAIDNWRNVAKTEAYSVEEQFTWDELPKQTTLAVSAESAEAAANVEEGEGEAEGIEVDTVLGSTLPPWSAARPYVNLYTHKAPISATVVGNYRLTAETSESDVHHIVLDFGQMPFPVLEGQSIAILPPGSTPDGRVHHARQYSIASARDGERRGYNNLSLTVKRVTTDAKGEARSGVCSNYLCDLKKGDSVQVIGPFGSSFLMPNHPNSHLLMICTGTGSAPMRAMTEYRRRRRLKGATGKLMLFFGARTREELPYFGPLMNLPKDFIDVNLAYSRTPGQPKRYVQDLMRERAEDVAAMLRDDSTYIYVCGLKGMEEGVLQALADIANQSGQPWEPLWKKLKQFGRLHLETY
>NZ_CP012159.1|WP_050430654.1|3405509_3406937_+|benzoyl-CoA-2,3-epoxidase-subunit-BoxB
MTSIDYSEKIPNNVNLAGDRTLQRALEQWQPNFISWWKDMGPEGSQSFDVYLRTAVSVDPSGWAHFDYVKMPEYRWGIFLTPAQQDRTIQFGEHKGQPAWQEVPGEHRANLRRIIVTQGDTEPASVEQQRHLGLTAPSLYDLRNLFQVNVEEGRHLWAMVYLLQRYFGRDGREEAEALLERRSGDEDNPRILGAFNERTPDWLSFFMFTYFTDRDGKFQLSALTESGFDPLARTTKFMLTEEAHHMFVGESGVSRVIQRTCAVMNQLKTDDPKTLRAAGVIDLETIQRYLNFHYAVTLDLFGADQSSNAAMFYSAGLKGRFEEGKRSDDHQLNGQSYKILGIEGGKLIEREVPMLNALNEVLRDDYIKDSVGGVGRWNKVIEKAGLPFRLSVPHKAFHRQIGTFAGNRVSPDGRLVSEEEWQKNQSNWLPTAEDRAFVASLMGRVAESGKFANWIAPPPMGINKQPIDFEYVRFN
>NZ_CP012159.1|WP_050430653.1|3403814_3405464_+|benzoyl-CoA-dihydrodiol-lyase
MSADARVDYRTEPSQYKHWKLSFDGPVATLGMDVVEDGGLREGYKLKLNSYDLGVDIELHDAIQRIRFEHPEVKTVVLTSMKDRVFCSGANIFMLGTSTHAWKVNFCKFTNETRNGLEDSSRHSGLKFLAAVNGACAGGGYELALACDEIYLIDDRSSAVSLPEVPLLGVLPGTGGLTRVTDKRKVRHDRADIFCTTVEGIRGERAKQWRLVDEIAKPAQFKDVVRARAAELATSSDRPEGVKGVALPRLERTESEEGLGYRYVQVSFDRARRTATFVVKAPEVAPAVEIADIEAAGAAWWPLAVARELDDAILTLRTNELDLGTWILKTEGEAAHVLAADAALLRHKDHWFVRETLGLLRRTLARLDVSSRTLFALIEAGSCFAGTLAELSFAADRTYMSAGGEGEPRITLSALNFGALPMVNGQSRLGRRFCEDEAELKAAKEATGKALTPAEADALGLVTAAPDELDWADEIRIALEERAAMSPDALTGMEANLRFAGAETMETRIFGRLSAWQNWIFIRPNAVGEKGALKVYGKGGKAQFDPTRV
>NZ_CP012159.1|WP_050430664.1|3418202_3419717_-|redoxin-domain-containing-protein
MLQVGERAPDIDALASDGQRFVLSAQGGLCTVVFFYPKAFTPNCNAETTLFRENYLELMLAGAKLVGISTDSMPTQCKFAGKMRVPFPLVPDPDRHVCKAWGVLRPILRVARRATFVIGPDLTVKAVFQHEFWVRHHRDDVLAFVNELFRANRAAQTGVAQGPAREPPAPPPPLMALAPTVASPGPRMPSTASTLPSAGVSPSAQTPIPSSAGPRSAVSPTSSPRNSVRAREVIAGRFELERRAASGASGDIHVALDRVTGRHVALKLLREGPERDEARFEREARILSALNHPGVVAYVAHGTDEAGNTFLATEWLEGESLAKRLGREPPLTLAESLALGLRVAATLGVAHAHGIIHRDLKPTNLFLPGGDVEQIKLLDFGVSRPTLDGNQLTTPGDMIGTPGYMAPEQARGKTSIDARADVFSLGCVIFRCVTGREAFLGDDVVTKLLAVVSQEVPPARSIDPTLPQALSDLLDRMLSKDPEGRPRDASKVAEELARIPPPRW
>NZ_CP012159.1|WP_050430665.1|3419759_3421238_-|sigma-54-dependent-Fis-family-transcriptional-regulator
MLDLDLSSFDVLVVDDEQDNLDAFRFTFRRSFRLNYARGGVEALEMLDRIDPAVILSDQRMPGMAGIDFLERAKQRRPDAFGILLTAYADIQVLVDAVNSGAVDRYIQKPWNSKELTAIIRQGIQVFSTKRENRRLREQLALYRGYLEREQRDPIDFGELVGDSRALQQVTTSIAEVASTSTHVLIEGEQGSEKDVVARAIHVGSSREEQPFVRVTCAAFRGEALERELFGWRRGAFEGAFGDRAGRLELAHGGTIYLDEPWPLTSSLQARLLRFLSDGQLERIGATDTLRVDVRVVLAVTTSFSETWGRGEVLPELVTRLSVFPIRLPPLRERPGDIPMLAEHFLRKYARRNARAATSLSEEAIAKLKAYAWPGNARELENVIERAAILSRGDVIQPEHLAYTPRPPLLAPSPLVETDTASPVSASVPPPSSISGKGGPASNLSASLEEYERQELLTAMARCNGNKAEVARYLGVQRTTLYYRLKRLGIDG
>NZ_CP012159.1|WP_050430666.1|3421498_3422056_+|ribosome-recycling-factor
MLEDVIKDLRGANEKAIEALRRDLSKVRTGRAHAGMLDSIRVDYYGVPTPLTQMATVAVPEPRLITVKPWEKGQTKFVEKAIREGDLGLNPQVDGEFIRIPIPALTEERRKEMVKLTKRNGEECKVAVRKNRRDANEMIDTLDKDGEVSGDEAERARKKVEEVIAESIKQVDAIIASKEKEILEV
>NZ_CP012159.1|WP_082362429.1|3422136_3423108_+|Stp1/IreP-family-PP2C-type-Ser/Thr-phosphatase
MKRNVVPTLRPGDIPRNHEVLRAVASGLTDVGLQRDHNEDSYAVLSEYDLFIVADGMGGHRAGDVASRMATESIADFFRTTAREDATWPFHFDTSLSEEENRLVAGIRVANRQIFERSLRSRDCAGMGTTVVGALFSRKKNRLYVGHVGDSRAYRVRGGLIEQLTRDHSLFNDYIAAMPDLTEEQRAELPRNVITRALGMQDNVVVDLMSDDPQIGDVFLLCSDGLSGMLADEQILETVQSTGDVSEICRRLVTRANEHGGDDNITVLAIRFQEEGALPDPLDAPTEPEGVAIHASDLQAASEQVTPTAPIAAPTRQSPPDES
>NZ_CP012159.1|WP_156338530.1|3423189_3423774_-|hypothetical-protein
MSLPRIALIPVFGIASLFAYGCSDPPPPTPRGGFDVQWLDSPPAECQLNTHRAQVGSPTATDPGEKISDGQNGASVECTVSGSGTYLVKGRIQQDLNILAVTVSSLSSSASRAAPAKGSVTFRSKELQAGSVNSDADEPCDFWFPDERPDDQRVSGGKAWLVFSCPKMNHLQGSVCALGESYVLFENCDLGEEE
>NZ_CP012159.1|WP_050435868.1|3423853_3425029_-|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme
MKPDRSYQGLSLDTLAVHAGQPPDPTSGAVMTPIVLASTFAQERPGQHKGFEYSRSGNPTRKALEDCLATIEGGKHGLAFSSGSSATAVLLHTLRPGDHVLAGDDLYGGTFRLLDKVMRPMGIGSSFLDLHDLDRVRAAITPATRMICLETPTNPMLKVFDVAALATIARERGVTLVVDNTFATPVLQRPLELGAHVVLHSTTKYLNGHSDVVGGALITSDGALAERLAFLQNALGAVPSPFDCYLVLRGLKTLGVRVRAQCATATTIATRLEQHPAVERVYYPGLASHPDRALIDRQMKGPGAMISLVLRGGLPAATAFLEGLQIFSCAESLGGVESLAEHPAIMTHASVPEASRSALGISDGLVRLSVGLEAEADLWGDIEQALARATR
>NZ_CP012159.1|WP_050435869.1|3425042_3425894_-|protein-kinase
MMYPAPEGTALFEHLGAGSVFDVALVQHGGRLLVCKRLNSRALREPAGRAALVREARVLSLVRHPALPELTRVGSDGHGPFILQTRQPGVSIRSVLEGWQARGRRPPRALVNHVVRTALEVLAEIQALCRVDGGGPLGLIHGDITPDHVLLGPIGDVRFVDLGAARFEGMPADLATDDRGTLPFVAPEVARGESAPTQAADLYSLAAALAWFTTGEALTRAREEAAALAEIGEHGLLLDPLKDDTTLAAGARDVLLRALARDPDERPCARALLDALDDEGNER
>NZ_CP012159.1|WP_050430668.1|3426372_3428004_+|S8-family-peptidase
MSQVWKFIYKTTIAPFFILTTVGCISDSPDADGADERELDGLLAEARHDDAPTRAKLRIPLTDLGLIKGTYIVRLAENAVQQDDPGKVMVAERRRRLAEGMVARVGLPKAALRHVYESALNGFAADMTEAEALQLADDPAVEFVEQDQVMQTTLAWGIDRIDQRSLPLDDVYTPGHADGRDVHTYVIDTGIRATHNELAGRVGPGRDLVDGDDTPVDCHGHGTHVAASLAGKTHGVAPGATIHGVRVLNCNGSGSNADVIAGIDWVRLNHVKPAVANLSLGGGVSQALDDAVASAISAGVTFAISAGNDNKSACDSSPARTPSAITVGSTTNTDGRSSFSNLGQCLDIFAPGTNIVSAWYTSNTATKTLSGTSMASPHVAGAAARYLSSHPSASPQEVRDALVQAATVDKITGAGTGSPNRLLYVGIETAGPPPSPSPSPSGSLRSGVPLTGLSAPVGAWIHHTFPVPAGAARVRFQMSGGVGDADLYVKRGAQPTVTSYDCRPYLLGNVETCTSNNPAEGMYHVSIRAYGAFSGVSLAANLE
>NZ_CP012159.1|WP_179955534.1|3428542_3430036_+|matrixin-family-metalloprotease
MTGVGCVADSVDEGDGVDEVGTNLMSFEEFEASVYREKDSGVYIVNGDEPIADIKLLREYWESHVREGALIVHRRGSADAKWNDTQKVNITYCVSTTFNNNHNTVVQAMASAAAAWEAVANVKFVYLSNLNSNCTASQSGVVFDVRPVNAGGQYLARAFFPGDSRSVSNVLIDSSSFSTSPPLTLTGILRHELGHVLGFRHEHTRLSSTGCYEDSNWRELTTYDAASVMHYPQCNGTGDWSLTLTQRDAQGAALLYGQPGSGGSGGSGGSGGSGGSGGSGGSGGSGGSGGSGGSTTQNVSGSVSTNQFVQVGSFDVTAGTTFSAVMTGTGDPDLYVRFDAAPTLSAYNCRPYAAGASETCTLTVPSGTTKAFIGVNGYTSGTFNIAATYTPPASGGGTVRNVSVSGSVAAGANAHHGPYAVIPGTPFTAAMTGSGDPDLYVQFGAQPSLSSYACRPYLSGASESCNLTVPAGQTQAYVMVNGYTSGSYSVALTHTSP
>NZ_CP012159.1|WP_050430670.1|3430257_3430578_+|HNH-endonuclease
MAIVKSPPEQPEPCPLCQRPNHHPSDHHLVPKSRGGRVTETLCADCHRGIHATFTNKELESTYNTAEALLSHEGFRKMVEFIAKQDPGGKVRMRVTKARGTRRRSG

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Crispr_ID: NZ_CP012159_12

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012159_12

3431005-3431085

Orphan

Consensus_repeat	Method
CCGTCTGTCATTTCGGCTGAGGCGCTCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP012159_12

>merge|NZ_CP012159|12|3431005-3431085|CRISPRCasFinder
CCGTCTGTCATTTCGGCTGAGGCGCTCCCGGTCGCAGCAACGAGACACCCAGACCGTCTGTCATTTCGGCTGAGGCGCTCC

>NZ_CP012159|12|11|3431005-3431085|CRISPRCasFinder
CCGTCTGTCATTTCGGCTGAGGCGCTCC	CGGTCGCAGCAACGAGACACCCAGA
CCGTCTGTCATTTCGGCTGAGGCGCTCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012159.1\|WP_050430679.1\|3447711_3448662_-\|NADP-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|176191
NZ_CP012159.1\|WP_179955534.1\|3428542_3430036_+\|matrixin-family-metalloprotease	unknown	unknown	gnl\|CDD\|239806
NZ_CP012159.1\|WP_156338131.1\|3438396_3439151_-\|IS5-family-transposase	unknown	unknown	gnl\|CDD\|379129
NZ_CP012159.1\|WP_156338530.1\|3423189_3423774_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050430664.1\|3418202_3419717_-\|redoxin-domain-containing-protein	unknown	unknown	gnl\|CDD\|270916
NZ_CP012159.1\|WP_050435870.1\|3432131_3433226_-\|histone-deacetylase	unknown	unknown	gnl\|CDD\|212518
NZ_CP012159.1\|WP_050430670.1\|3430257_3430578_+\|HNH-endonuclease	unknown	unknown	gnl\|CDD\|366837
NZ_CP012159.1\|WP_050430666.1\|3421498_3422056_+\|ribosome-recycling-factor	unknown	unknown	gnl\|CDD\|178850
NZ_CP012159.1\|WP_050430665.1\|3419759_3421238_-\|sigma-54-dependent-Fis-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225114
NZ_CP012159.1\|WP_050430672.1\|3433903_3436465_+\|transglycosylase-SLT-domain-containing-protein	unknown	unknown	gnl\|CDD\|381604
NZ_CP012159.1\|WP_050430677.1\|3444796_3446383_-\|CotH-kinase-family-protein	unknown	unknown	gnl\|CDD\|378045
NZ_CP012159.1\|WP_050430678.1\|3447145_3447685_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_082362431.1\|3443072_3444593_-\|collagen-like-protein	unknown	unknown	gnl\|CDD\|236090
NZ_CP012159.1\|WP_082362429.1\|3422136_3423108_+\|Stp1/IreP-family-PP2C-type-Ser/Thr-phosphatase	unknown	unknown	gnl\|CDD\|223704
NZ_CP012159.1\|WP_050430668.1\|3426372_3428004_+\|S8-family-peptidase	unknown	unknown	gnl\|CDD\|173790
NZ_CP012159.1\|WP_156338531.1\|3436573_3437860_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050435871.1\|3446477_3446846_-\|ribosome-binding-factor-A	unknown	unknown	gnl\|CDD\|234787
NZ_CP012159.1\|WP_050435869.1\|3425042_3425894_-\|protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP012159.1\|WP_050435868.1\|3423853_3425029_-\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|223699
NZ_CP012159.1\|WP_050430675.1\|3440809_3442726_-\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|270916

Protein	Function_ID	Function_description	E-value
NZ_CP012159.1\|WP_179955534.1\|3428542_3430036_+\|matrixin-family-metalloprotease	gnl\|CDD\|239806	cd04279, ZnMc_MMP_like_1, Zinc-dependent metalloprotease; MMP_like sub-family 1. A group of bacterial, archaeal, and fungal metalloproteinase domains similar to matrix metalloproteinases and astacin.	8.18245e-25
NZ_CP012159.1\|WP_156338131.1\|3438396_3439151_-\|IS5-family-transposase	gnl\|CDD\|379129	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096).	2.20203e-30
NZ_CP012159.1\|WP_050430664.1\|3418202_3419717_-\|redoxin-domain-containing-protein	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	8.76998e-88
NZ_CP012159.1\|WP_050435870.1\|3432131_3433226_-\|histone-deacetylase	gnl\|CDD\|212518	cd09992, HDAC_classII, Histone deacetylases and histone-like deacetylases, classII. Class II histone deacetylases are Zn-dependent enzymes that catalyze hydrolysis of N(6)-acetyl-lysine residues of histones (EC 3.5.1.98) and possibly other proteins to yield deacetylated histones/other proteins. This group includes animal HDAC4,5,6,7,8,9,10, fungal HOS3 and HDA1, plant HDA5 and HDA15 as well as other eukaryotes, archaeal and bacterial histone-like deacetylases. Eukaryotic deacetylases mostly use histones (H2, H3, H4) as substrates for deacetylation; however, non-histone substrates are known (for example, tubulin). Substrates for prokaryotic histone-like deacetylases are not known. Histone acetylation/deacetylation process is important for mediation of transcriptional regulation of many genes. Histone deacetylases usually act via association with DNA binding proteins to target specific chromatin regions. Interaction partners of class II deacetylases include 14-3-3 proteins, MEF2 family of transcriptional factors, CtBP, calmodulin (CaM), SMRT, N-CoR, BCL6, HP1alpha and SUMO. Histone deacetylases play a role in the regulation of cell cycle, cell differentiation and survival. Class II mammalian HDACs are differentially inhibited by structurally diverse compounds with known antitumor activities, thus presenting them as potential drug targets for human diseases resulting from aberrant acetylation.	2.4608e-146
NZ_CP012159.1\|WP_050430670.1\|3430257_3430578_+\|HNH-endonuclease	gnl\|CDD\|366837	pfam01844, HNH, HNH endonuclease. His-Asn-His (HNH) proteins are a very common family of small nucleic acid-binding proteins that are generally associated with endonuclease activity.	0.00143968
NZ_CP012159.1\|WP_050430666.1\|3421498_3422056_+\|ribosome-recycling-factor	gnl\|CDD\|178850	PRK00083, frr, ribosome recycling factor; Reviewed.	7.31232e-88
NZ_CP012159.1\|WP_050430665.1\|3419759_3421238_-\|sigma-54-dependent-Fis-family-transcriptional-regulator	gnl\|CDD\|225114	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms].	6.07228e-145
NZ_CP012159.1\|WP_050430672.1\|3433903_3436465_+\|transglycosylase-SLT-domain-containing-protein	gnl\|CDD\|381604	cd13401, Slt70-like, 70kDa soluble lytic transglycosylase (Slt70) and similar proteins. Catalytic domain of the 70kda soluble lytic transglycosylase (LT)-like proteins, which also have an N-terminal U-shaped U-domain and a linker L-domain. LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. Proteins similar to this family include the soluble and insoluble membrane-bound LTs in bacteria and the LTs in bacteriophage lambda.	6.82173e-64
NZ_CP012159.1\|WP_050430677.1\|3444796_3446383_-\|CotH-kinase-family-protein	gnl\|CDD\|378045	pfam08757, CotH, CotH kinase protein. Members of this family include the spore coat protein H (cotH). This protein is an atypical protein kinase that phosphorylates CotB and CotG.	8.55898e-78
NZ_CP012159.1\|WP_082362431.1\|3443072_3444593_-\|collagen-like-protein	gnl\|CDD\|236090	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated.	1.12468e-13
NZ_CP012159.1\|WP_082362429.1\|3422136_3423108_+\|Stp1/IreP-family-PP2C-type-Ser/Thr-phosphatase	gnl\|CDD\|223704	COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms].	3.07984e-76
NZ_CP012159.1\|WP_050430668.1\|3426372_3428004_+\|S8-family-peptidase	gnl\|CDD\|173790	cd04077, Peptidases_S8_PCSK9_ProteinaseK_like, Peptidase S8 family domain in ProteinaseK-like proteins. The peptidase S8 or Subtilase clan of proteases have a Asp/His/Ser catalytic triad that is not homologous to trypsin. This CD contains several members of this clan including: PCSK9 (Proprotein convertase subtilisin/kexin type 9), Proteinase_K, Proteinase_T, and other subtilisin-like serine proteases. PCSK9 posttranslationally regulates hepatic low-density lipoprotein receptors (LDLRs) by binding to LDLRs on the cell surface, leading to their degradation. The binding site of PCSK9 has been localized to the epidermal growth factor-like repeat A (EGF-A) domain of the LDLR. Characterized Proteinases K are secreted endopeptidases with a high degree of sequence conservation. Proteinases K are not substrate-specific and function in a wide variety of species in different pathways. It can hydrolyze keratin and other proteins with subtilisin-like specificity. The number of calcium-binding motifs found in these differ. Proteinase T is a novel proteinase from the fungus Tritirachium album Limber. The amino acid sequence of proteinase T as deduced from the nucleotide sequence is about 56% identical to that of proteinase K.	7.36816e-128
NZ_CP012159.1\|WP_050430679.1\|3447711_3448662_-\|NADP-dependent-oxidoreductase	gnl\|CDD\|176191	cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction.	5.17348e-113
NZ_CP012159.1\|WP_050435871.1\|3446477_3446846_-\|ribosome-binding-factor-A	gnl\|CDD\|234787	PRK00521, rbfA, 30S ribosome-binding factor RbfA.	2.14506e-05
NZ_CP012159.1\|WP_050435869.1\|3425042_3425894_-\|protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	9.11277e-32
NZ_CP012159.1\|WP_050435868.1\|3423853_3425029_-\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|223699	COG0626, MetC, Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism].	0
NZ_CP012159.1\|WP_050430675.1\|3440809_3442726_-\|serine/threonine-protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	2.05948e-100

>NZ_CP012159.1|WP_050430670.1|3430257_3430578_+|HNH-endonuclease
MAIVKSPPEQPEPCPLCQRPNHHPSDHHLVPKSRGGRVTETLCADCHRGIHATFTNKELESTYNTAEALLSHEGFRKMVEFIAKQDPGGKVRMRVTKARGTRRRSG
>NZ_CP012159.1|WP_179955534.1|3428542_3430036_+|matrixin-family-metalloprotease
MTGVGCVADSVDEGDGVDEVGTNLMSFEEFEASVYREKDSGVYIVNGDEPIADIKLLREYWESHVREGALIVHRRGSADAKWNDTQKVNITYCVSTTFNNNHNTVVQAMASAAAAWEAVANVKFVYLSNLNSNCTASQSGVVFDVRPVNAGGQYLARAFFPGDSRSVSNVLIDSSSFSTSPPLTLTGILRHELGHVLGFRHEHTRLSSTGCYEDSNWRELTTYDAASVMHYPQCNGTGDWSLTLTQRDAQGAALLYGQPGSGGSGGSGGSGGSGGSGGSGGSGGSGGSGGSGGSTTQNVSGSVSTNQFVQVGSFDVTAGTTFSAVMTGTGDPDLYVRFDAAPTLSAYNCRPYAAGASETCTLTVPSGTTKAFIGVNGYTSGTFNIAATYTPPASGGGTVRNVSVSGSVAAGANAHHGPYAVIPGTPFTAAMTGSGDPDLYVQFGAQPSLSSYACRPYLSGASESCNLTVPAGQTQAYVMVNGYTSGSYSVALTHTSP
>NZ_CP012159.1|WP_050430668.1|3426372_3428004_+|S8-family-peptidase
MSQVWKFIYKTTIAPFFILTTVGCISDSPDADGADERELDGLLAEARHDDAPTRAKLRIPLTDLGLIKGTYIVRLAENAVQQDDPGKVMVAERRRRLAEGMVARVGLPKAALRHVYESALNGFAADMTEAEALQLADDPAVEFVEQDQVMQTTLAWGIDRIDQRSLPLDDVYTPGHADGRDVHTYVIDTGIRATHNELAGRVGPGRDLVDGDDTPVDCHGHGTHVAASLAGKTHGVAPGATIHGVRVLNCNGSGSNADVIAGIDWVRLNHVKPAVANLSLGGGVSQALDDAVASAISAGVTFAISAGNDNKSACDSSPARTPSAITVGSTTNTDGRSSFSNLGQCLDIFAPGTNIVSAWYTSNTATKTLSGTSMASPHVAGAAARYLSSHPSASPQEVRDALVQAATVDKITGAGTGSPNRLLYVGIETAGPPPSPSPSPSGSLRSGVPLTGLSAPVGAWIHHTFPVPAGAARVRFQMSGGVGDADLYVKRGAQPTVTSYDCRPYLLGNVETCTSNNPAEGMYHVSIRAYGAFSGVSLAANLE
>NZ_CP012159.1|WP_050435869.1|3425042_3425894_-|protein-kinase
MMYPAPEGTALFEHLGAGSVFDVALVQHGGRLLVCKRLNSRALREPAGRAALVREARVLSLVRHPALPELTRVGSDGHGPFILQTRQPGVSIRSVLEGWQARGRRPPRALVNHVVRTALEVLAEIQALCRVDGGGPLGLIHGDITPDHVLLGPIGDVRFVDLGAARFEGMPADLATDDRGTLPFVAPEVARGESAPTQAADLYSLAAALAWFTTGEALTRAREEAAALAEIGEHGLLLDPLKDDTTLAAGARDVLLRALARDPDERPCARALLDALDDEGNER
>NZ_CP012159.1|WP_050435868.1|3423853_3425029_-|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme
MKPDRSYQGLSLDTLAVHAGQPPDPTSGAVMTPIVLASTFAQERPGQHKGFEYSRSGNPTRKALEDCLATIEGGKHGLAFSSGSSATAVLLHTLRPGDHVLAGDDLYGGTFRLLDKVMRPMGIGSSFLDLHDLDRVRAAITPATRMICLETPTNPMLKVFDVAALATIARERGVTLVVDNTFATPVLQRPLELGAHVVLHSTTKYLNGHSDVVGGALITSDGALAERLAFLQNALGAVPSPFDCYLVLRGLKTLGVRVRAQCATATTIATRLEQHPAVERVYYPGLASHPDRALIDRQMKGPGAMISLVLRGGLPAATAFLEGLQIFSCAESLGGVESLAEHPAIMTHASVPEASRSALGISDGLVRLSVGLEAEADLWGDIEQALARATR
>NZ_CP012159.1|WP_156338530.1|3423189_3423774_-|hypothetical-protein
MSLPRIALIPVFGIASLFAYGCSDPPPPTPRGGFDVQWLDSPPAECQLNTHRAQVGSPTATDPGEKISDGQNGASVECTVSGSGTYLVKGRIQQDLNILAVTVSSLSSSASRAAPAKGSVTFRSKELQAGSVNSDADEPCDFWFPDERPDDQRVSGGKAWLVFSCPKMNHLQGSVCALGESYVLFENCDLGEEE
>NZ_CP012159.1|WP_082362429.1|3422136_3423108_+|Stp1/IreP-family-PP2C-type-Ser/Thr-phosphatase
MKRNVVPTLRPGDIPRNHEVLRAVASGLTDVGLQRDHNEDSYAVLSEYDLFIVADGMGGHRAGDVASRMATESIADFFRTTAREDATWPFHFDTSLSEEENRLVAGIRVANRQIFERSLRSRDCAGMGTTVVGALFSRKKNRLYVGHVGDSRAYRVRGGLIEQLTRDHSLFNDYIAAMPDLTEEQRAELPRNVITRALGMQDNVVVDLMSDDPQIGDVFLLCSDGLSGMLADEQILETVQSTGDVSEICRRLVTRANEHGGDDNITVLAIRFQEEGALPDPLDAPTEPEGVAIHASDLQAASEQVTPTAPIAAPTRQSPPDES
>NZ_CP012159.1|WP_050430666.1|3421498_3422056_+|ribosome-recycling-factor
MLEDVIKDLRGANEKAIEALRRDLSKVRTGRAHAGMLDSIRVDYYGVPTPLTQMATVAVPEPRLITVKPWEKGQTKFVEKAIREGDLGLNPQVDGEFIRIPIPALTEERRKEMVKLTKRNGEECKVAVRKNRRDANEMIDTLDKDGEVSGDEAERARKKVEEVIAESIKQVDAIIASKEKEILEV
>NZ_CP012159.1|WP_050430665.1|3419759_3421238_-|sigma-54-dependent-Fis-family-transcriptional-regulator
MLDLDLSSFDVLVVDDEQDNLDAFRFTFRRSFRLNYARGGVEALEMLDRIDPAVILSDQRMPGMAGIDFLERAKQRRPDAFGILLTAYADIQVLVDAVNSGAVDRYIQKPWNSKELTAIIRQGIQVFSTKRENRRLREQLALYRGYLEREQRDPIDFGELVGDSRALQQVTTSIAEVASTSTHVLIEGEQGSEKDVVARAIHVGSSREEQPFVRVTCAAFRGEALERELFGWRRGAFEGAFGDRAGRLELAHGGTIYLDEPWPLTSSLQARLLRFLSDGQLERIGATDTLRVDVRVVLAVTTSFSETWGRGEVLPELVTRLSVFPIRLPPLRERPGDIPMLAEHFLRKYARRNARAATSLSEEAIAKLKAYAWPGNARELENVIERAAILSRGDVIQPEHLAYTPRPPLLAPSPLVETDTASPVSASVPPPSSISGKGGPASNLSASLEEYERQELLTAMARCNGNKAEVARYLGVQRTTLYYRLKRLGIDG
>NZ_CP012159.1|WP_050430664.1|3418202_3419717_-|redoxin-domain-containing-protein
MLQVGERAPDIDALASDGQRFVLSAQGGLCTVVFFYPKAFTPNCNAETTLFRENYLELMLAGAKLVGISTDSMPTQCKFAGKMRVPFPLVPDPDRHVCKAWGVLRPILRVARRATFVIGPDLTVKAVFQHEFWVRHHRDDVLAFVNELFRANRAAQTGVAQGPAREPPAPPPPLMALAPTVASPGPRMPSTASTLPSAGVSPSAQTPIPSSAGPRSAVSPTSSPRNSVRAREVIAGRFELERRAASGASGDIHVALDRVTGRHVALKLLREGPERDEARFEREARILSALNHPGVVAYVAHGTDEAGNTFLATEWLEGESLAKRLGREPPLTLAESLALGLRVAATLGVAHAHGIIHRDLKPTNLFLPGGDVEQIKLLDFGVSRPTLDGNQLTTPGDMIGTPGYMAPEQARGKTSIDARADVFSLGCVIFRCVTGREAFLGDDVVTKLLAVVSQEVPPARSIDPTLPQALSDLLDRMLSKDPEGRPRDASKVAEELARIPPPRW
>NZ_CP012159.1|WP_050435870.1|3432131_3433226_-|histone-deacetylase
MVDDPLFDEHQARGHHPERPERLAAARRAVERCVDEGLRPLMLTPRDATDEEILRAHEPAYLKTLQELEGQWTMLDADTYLSPVSLSASRRAAGGALSLVDALLDQPSPSAAGASSPSVGFALLRPPGHHATRRVGMGFCLLDNVAIAAYGALQRGLQRVAIVDWDVHHGNGTQDIFWQDPRVLFISLHQWPFYPGTGMTTEVGEGEGRGYTVNVPLSEGANDAVYCAAFDQIVLPVLAEYAPELILVSAGYDAHERDPLASMRVTASGYGSMTKKLRAAARTSAEGRLGLILEGGYSLTALETSVAATLRALTADAPEVAGGDGDGAGRDESEDVELHGPVSPRHQSEIDRARRHAQRHWPNL
>NZ_CP012159.1|WP_050430672.1|3433903_3436465_+|transglycosylase-SLT-domain-containing-protein
MRTALTAALLGLLALGATASGCAEQRAAGPPPAQSTANVPMTAPSAGPQGTPPLLAAAVALTPPASRAPTPSWVDAMRLDRFAEAAEQLDTLPEADRARPEVRYARARVALALDDPELAVSLLHALEAELPLLAADIARHRAEAAFEAGPHAEAAAYFASSKSPRDLPRAAEAYARAGDIPQALAFANRAVAAAQRSKNKNDEAVARLARAHVFRLAAAPRPQKPRGTGPILTAPAAARVTRTVPRIEPLPSSPVGAMASAGAATSAEATSTSAGATAGSAPTAAPWAPWAPTAATPRPPRPHAATAKLPAPPAALADLRWIARSAPTTPSGQEARETLALLGTPLTPAERLDIADALLAGGRPAEAVVELTKLGPSATLTRPDLQHRRATALYRARDNAAAARAFLEAAASPTPRQPEQLYYAARSFLRQDQKNDAITRLREVVAKFPRTSWADDASYLLGQIYLQTGRYAEAAKQYTQFLGRAPRSNRRHDAEHDLALALISSGDPAGARTRLATLAKNARRVDDTARLKELEGLAALRAGDRAGAIQLWSDVMRSYPLSWGALTARARLVAAGAEPPPLLAPPTTTPPAPLAIQLPPTAALLTSVGLDADAERWVADNERTVSAPYGARSGEALCSLYGELTRAKRRYRVGVNAVAYDTLKRAPSDAERWAWECLYPQPYLPIVNTLEDEQGVPRALIYALMRQESAFDPVVVSPVSAVGLMQLMPTTAARAASEMELPFEPRSLERPEINLRLGTYYIAKLLRMFDGSLPLAAAAYNAGPQAVASWLADGVEQDTDLWVARIPFGETRHYVSRVLANLARYQWLAGGDAAVPLAPLTIPTGIRAPSDAY
>NZ_CP012159.1|WP_156338531.1|3436573_3437860_+|hypothetical-protein
MARVGNRRLALRDRTLRVHAYRDARLFGAVAAWSFFAFALLTTVSIGFPIVRHLPLFTSLLALSIILLTGFAIAAALIWIGAAWGAASHRASIRISDALYAERGGRRLEIPVAAIQRAHLRRRNRILTLVTDLGTTLSISIRGRNEALHLLDTVARAGATASWRARVYLPAPPRAREILSLAYGAAVVLLVDLLPGTTTSFATACGALFGVTTWFIAQLTGFPRRRADLLVGRDGLAFRRHGRERFIAFARIQRAEPTERGVRLVLSSGEHVEFDLTPPALRRAAESLTSALCARRCAHLLHLIEEPRALSETSPVADELLARRGRPLPDWQAALRGLVTDEGATYRTVTLAPERALQVLEDGRAPLELRIGAAMALAPTRERNTSRRLRLAIATSASEEVRTALEEAAEGELQEATLARARMAVGDG
>NZ_CP012159.1|WP_156338131.1|3438396_3439151_-|IS5-family-transposase
MAVRRQLNDQQWLRIESFLASERGRGRPALDDRLFVDAVLWILRTGAPWRDLPTEFGPWQTVFNRFDRWSKTGKWQRLFKVLQTDIDDEWISIDSTIVRAHQHAAGAKGGSQGQCIGRSRGGLSTKVHLTVDALGLPLDFIITEGQRHDIIAAPELIARSAPRCLLADKAYDTNDIRAQLDALGAIAVIPSKVNRKPQIPHDQHLYKERAAVECTFNLLKGARRLATRYEKTVRNYAAIVTLACVLCWLRI
>NZ_CP012159.1|WP_050430675.1|3440809_3442726_-|serine/threonine-protein-kinase
MNIASGTIVGGKYRIERPLSRGGMGSVWAGRHVALGSPVAIKFMAAEYAALPTFVGRFEREARIAANLRTPHVVHVGDYGIERGNPYIVMELLQGEDLAARLERVRRIPLHEALRILAQVAKALRKAHEAGLVHRDLKPGNIFLTTVEDEEVVKVLDFGIAKETRRRRGRKDGERRRRGEIAEWELTRTGELLGSPYYMSPEQVRGDKDIDHRSDLWSLGIILFRVLTGELPFAGDDFGSILSRILVDPVPRATSAAPHLPEAIDGFFQRCLERDRTKRFQSVSDMLEELYRVADLQPPITSLIERRLQLVEEQVTLIAGSVPGRRSGVDWHAQAPPPPSRTCADAIPTMKQTRRELSTQHETYADGSSDQHLHTTAPSTVTKRSMPPSEELAVLPYTSASTWIAPVAIVVAIAGTILAGWAMTKPTSGVGHHEPPQGSAPHHLELPAPLEDPPRAMPPPPHDPSEPAPTTNHPPPRSLPPKTPYDTPRPTGTPLHRRARADVTPAPSAPSSQARDPSLRTSSSKERIGIEPPGPSSEVDAEAASFTEGPPFPESMAQRQLDQAALQARSCATQTSEKGGGRLQVQFTPNGTVNEAIVMGPPFAHTEIGRCIEAKFRALTIPRFNGAPVRRYQLFSLP
>NZ_CP012159.1|WP_082362431.1|3443072_3444593_-|collagen-like-protein
MRASVLLAGLLALSASLPACSSDDLPADAECVKDAECSGAGAVCLSNKCFQFVADCAQCAGETCTDRCLAGVPGPPGVAGATGPAGPEGAQGTPGEAGPAGAQGADGSTGPQGEPGPAGPVGPTGQAGAPGSMGPMGPAGPQGAAGPQGPAGPAGATGAQGPAGATGAQGPAGPSGATGAQGPAGTVGAQGPAGVAGPAGPMGPAGPTGPAGAGAPGPQGAPGQPGPPGTLYGEEAALFVGFTSTQMEGAVGSREQMHAICSAQYVGSHFCHVAEYYGAGAASPVPASGAWVDSSGAISVSSGTVYSLSTLTGPRSGRNSSSNDSANCANWTSNTYQSGQYTYNASGMTVSVGGPQTGLCNAARPLACCATPYREAFAGFSSASTVGEAGGRESMHARCANEFTGSHMCHAAEYARATPTTLPPAEGAWLDSSSYFANNTVYTISGLGSMDGGRMAGRSDSSNCANWTSNTYQSGQYTYNSSGLTATRTGFSTNLCNVARPVACCY
>NZ_CP012159.1|WP_050430677.1|3444796_3446383_-|CotH-kinase-family-protein
MRHPRLPLATIALVLGALPALGCSDDSGDPTDGKTNSTTTTEPEPAALCQPSGGGPHWLLEGETVIFQVGCATDMVLPDDAFEVTSLPEGATYDATKREVAFSPGFDQAAVYEVEIHVAETSETAQVKIGVADAWDHPSNVPVVDPTRYTEEYGLPVLFLQQRPVTDEYVANTFIYRGHTYTAEAKLRGASSLGYPKNSYTLKFSKQDRFQEPDEADGFTNKRKIVLTTPFDDNSYVRQRLAYDLWNRLDPGHVQIQTYSAVVYIEGEYWGLYTVGDHVDKDLMEQHGFWDDGNLYKAINHDANFDTRASGGGPKGALHAGYEKKEGFPEEGEPGAFSDLEELVQFVATSDAATFRSQIGSRIDRRDYENWWIFVTFIKGSDSAGKNSYHYRDPRSNGVFRFMPWDFNESFGQTWQSERTGASEVIEYRNMNRLFDRFLEEPSIAGPLKARYAEVLHGVYSESAVQALVDGYIARIDTSARRDEQKWGQAYQTYGGWAWRNNFTTYEEEVAYLKAWISERWRFQDALY
>NZ_CP012159.1|WP_050435871.1|3446477_3446846_-|ribosome-binding-factor-A
MSRGRSRSRDEAAPIMGDDPFTGMVASKAERKERQLCRQAHEALSEALATLNDSILLEVWVAAVEPAPDGSRLAVIVQAPRGAPLDEVKERLERVAGYLRSEVASAIHRKRAPTLVFQVMPP
>NZ_CP012159.1|WP_050430678.1|3447145_3447685_-|hypothetical-protein
MKTDLRRPTLRQYLSTGVALALALTGAACIVTTSSSGEPSGACTQIGCGGAFSVEFARNGAWPAGTYRVSVETDGATVDCTTTLPFSGCSEAPACTSTPGFILGLSGCALPASEHKLSGIEFPQTTPSSPPARISVKVYADETLLGEGAYTPTYTTSQPNGPDCGPTCTGAPPVVLTLN
>NZ_CP012159.1|WP_050430679.1|3447711_3448662_-|NADP-dependent-oxidoreductase
MNQGVPVSTRAARVHSYDVLQRVRVEDAPDPVAGAGEVLLDVAAAGVNPIDWKIVEGYLKDLLGDRFPLTPGVEVCGTVAALGEGVEDLALGDTVFGLIGLTGGYATRIAVPARFLAPKPRSLSHLEAGASAAAALTAFQAVHELGKLTPGQRVLVHAAAGGVGSFAVQMARIAGAEVIGVTSAGNEAYVLGLGASRVIDYRTERFENLVAEVDLVLDLVGGDTLERSWDVLKPGGLLVSAISPPDPARAAAVGARGIHLVSRSDSAQLREIGGLFDSGKLRLTLAGVFPLDEVVQALEISKAGRVRGKLVLDTRS

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Crispr_ID: NZ_CP012159_13

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012159_13

3438125-3438353

Orphan

Consensus_repeat	Method
GGTCGCGGCACGGCGNCNG	CRT

5 spacers

The CRISPR arrays of NZ_CP012159_13

>merge|NZ_CP012159|13|3438125-3438353|CRT
GGTCGCGGCACGGCGTCCGCGACCTTGTTGAAACGTAAACAGGGTCGCGGCACGGCGTCCGGGAGGTCGGCGTAACGTGATCAAGGTCGCGGCACGGCGTCCGCGACCTCGTTGAAACGTAAACAGGCTCGCGGCACGGCGGCGGGGAGGTCGGCGTAACGTGATCAAGGTCGCGGCACGGCGTCCGCGACCTCGTTGAAACGTAAACAGGGTCGCGGCACAGCGGCGG

>NZ_CP012159|13|2|3438125-3438353|CRT
GGTCGCGGCACGGCGTCCG	CGACCTTGTTGAAACGTAAACAG
GGTCGCGGCACGGCGTCCG	GGAGGTCGGCGTAACGTGATCAA
GGTCGCGGCACGGCGTCCG	CGACCTCGTTGAAACGTAAACAG
GCTCGCGGCACGGCGGCGG	GGAGGTCGGCGTAACGTGATCAA
GGTCGCGGCACGGCGTCCG	CGACCTCGTTGAAACGTAAACAG
GGTCGCGGCACAGCGGCGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012159.1\|WP_050430679.1\|3447711_3448662_-\|NADP-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|176191
NZ_CP012159.1\|WP_050430671.1\|3430628_3431024_+\|VOC-family-protein	unknown	unknown	gnl\|CDD\|319923
NZ_CP012159.1\|WP_050430672.1\|3433903_3436465_+\|transglycosylase-SLT-domain-containing-protein	unknown	unknown	gnl\|CDD\|381604
NZ_CP012159.1\|WP_156338530.1\|3423189_3423774_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050435871.1\|3446477_3446846_-\|ribosome-binding-factor-A	unknown	unknown	gnl\|CDD\|234787
NZ_CP012159.1\|WP_050430680.1\|3449323_3450037_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050430670.1\|3430257_3430578_+\|HNH-endonuclease	unknown	unknown	gnl\|CDD\|366837
NZ_CP012159.1\|WP_050435869.1\|3425042_3425894_-\|protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP012159.1\|WP_050430681.1\|3450085_3450754_+\|uracil-DNA-glycosylase-family-protein	unknown	unknown	gnl\|CDD\|381683
NZ_CP012159.1\|WP_050435870.1\|3432131_3433226_-\|histone-deacetylase	unknown	unknown	gnl\|CDD\|212518
NZ_CP012159.1\|WP_179955534.1\|3428542_3430036_+\|matrixin-family-metalloprotease	unknown	unknown	gnl\|CDD\|239806
NZ_CP012159.1\|WP_050430682.1\|3450772_3451660_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050430677.1\|3444796_3446383_-\|CotH-kinase-family-protein	unknown	unknown	gnl\|CDD\|378045
NZ_CP012159.1\|WP_050430678.1\|3447145_3447685_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_082362431.1\|3443072_3444593_-\|collagen-like-protein	unknown	unknown	gnl\|CDD\|236090
NZ_CP012159.1\|WP_050430668.1\|3426372_3428004_+\|S8-family-peptidase	unknown	unknown	gnl\|CDD\|173790
NZ_CP012159.1\|WP_156338531.1\|3436573_3437860_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_156338131.1\|3438396_3439151_-\|IS5-family-transposase	unknown	unknown	gnl\|CDD\|379129
NZ_CP012159.1\|WP_050435868.1\|3423853_3425029_-\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|223699
NZ_CP012159.1\|WP_050430675.1\|3440809_3442726_-\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|270916

Protein	Function_ID	Function_description	E-value
NZ_CP012159.1\|WP_050430671.1\|3430628_3431024_+\|VOC-family-protein	gnl\|CDD\|319923	cd07262, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	3.35243e-43
NZ_CP012159.1\|WP_050430675.1\|3440809_3442726_-\|serine/threonine-protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	2.05948e-100
NZ_CP012159.1\|WP_050435871.1\|3446477_3446846_-\|ribosome-binding-factor-A	gnl\|CDD\|234787	PRK00521, rbfA, 30S ribosome-binding factor RbfA.	2.14506e-05
NZ_CP012159.1\|WP_050430670.1\|3430257_3430578_+\|HNH-endonuclease	gnl\|CDD\|366837	pfam01844, HNH, HNH endonuclease. His-Asn-His (HNH) proteins are a very common family of small nucleic acid-binding proteins that are generally associated with endonuclease activity.	0.00143968
NZ_CP012159.1\|WP_050435869.1\|3425042_3425894_-\|protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	9.11277e-32
NZ_CP012159.1\|WP_050430681.1\|3450085_3450754_+\|uracil-DNA-glycosylase-family-protein	gnl\|CDD\|381683	cd10033, UDG_like, uncharacterized family of the uracil-DNA glycosylase superfamily. Uracil-DNA glycosylases (UDGs) initiate repair of uracils in DNA. Uracil may arise from mis-incorporation of dUMP residues by DNA polymerase or via deamination of cytosine. Uracil in DNA mispaired with guanine is one of the major pro-mutagenic events, causing G:C->A:T mutations; thus, UDG is an essential enzyme for maintaining the integrity of genetic information. UDGs have been classified into various families on the basis of their substrate specificity, conserved motifs, and structural similarities. Although these families demonstrate different substrate specificities, often the function of one enzyme can be complemented by the other. UDG family 1 is the most efficient uracil-DNA glycosylase (UDG, also known as UNG) and shows a specificity for uracil in DNA. UDG family 2 includes thymine DNA glycosylase which removes uracil and thymine from G:U and G:T mismatches, and mismatch-specific uracil DNA glycosylase (MUG) which in Escherichia coli is highly specific to G:U mismatches but also repairs G:T mismatches at high enzyme concentration. UDG family 3 includes Human SMUG1 which can remove uracil and its oxidized pyrimidine derivatives from, single-stranded DNA and double-stranded DNA with a preference for single-stranded DNA. Pedobacter heparinus SMUG2, which is UDG family 3 SMUG1-like, displays catalytic activities towards DNA containing uracil or hypoxanthine/xanthine. UDG family 4 includes Thermotoga maritima TTUDGA, a robust UDG which like family 1, acts on double-stranded and single-stranded uracil-containing DNA. UDG family 5 (UDGb) includes Thermus thermophilus HB8 TTUDGB which acts on double-stranded uracil-containing DNA; it is a hypoxanthine DNA glycosylase acting on double-stranded hypoxanthine-containing DNA except for the C/I base pair, as well as a xanthine DNA glycosylase which acts on both double-stranded and single-stranded xanthine-containing DNA. UDG family 6 hypoxanthine-DNA glycosylase lacks any detectable UDG activity; it excises hypoxanthine. Other UDG families include one represented by Bradyrhizobium diazoefficiens Blr0248 which prefers single-stranded DNA and removes uracil, 5-hydroxymethyl-uracil or xanthine from it.	1.12541e-87
NZ_CP012159.1\|WP_050435870.1\|3432131_3433226_-\|histone-deacetylase	gnl\|CDD\|212518	cd09992, HDAC_classII, Histone deacetylases and histone-like deacetylases, classII. Class II histone deacetylases are Zn-dependent enzymes that catalyze hydrolysis of N(6)-acetyl-lysine residues of histones (EC 3.5.1.98) and possibly other proteins to yield deacetylated histones/other proteins. This group includes animal HDAC4,5,6,7,8,9,10, fungal HOS3 and HDA1, plant HDA5 and HDA15 as well as other eukaryotes, archaeal and bacterial histone-like deacetylases. Eukaryotic deacetylases mostly use histones (H2, H3, H4) as substrates for deacetylation; however, non-histone substrates are known (for example, tubulin). Substrates for prokaryotic histone-like deacetylases are not known. Histone acetylation/deacetylation process is important for mediation of transcriptional regulation of many genes. Histone deacetylases usually act via association with DNA binding proteins to target specific chromatin regions. Interaction partners of class II deacetylases include 14-3-3 proteins, MEF2 family of transcriptional factors, CtBP, calmodulin (CaM), SMRT, N-CoR, BCL6, HP1alpha and SUMO. Histone deacetylases play a role in the regulation of cell cycle, cell differentiation and survival. Class II mammalian HDACs are differentially inhibited by structurally diverse compounds with known antitumor activities, thus presenting them as potential drug targets for human diseases resulting from aberrant acetylation.	2.4608e-146
NZ_CP012159.1\|WP_179955534.1\|3428542_3430036_+\|matrixin-family-metalloprotease	gnl\|CDD\|239806	cd04279, ZnMc_MMP_like_1, Zinc-dependent metalloprotease; MMP_like sub-family 1. A group of bacterial, archaeal, and fungal metalloproteinase domains similar to matrix metalloproteinases and astacin.	8.18245e-25
NZ_CP012159.1\|WP_050430672.1\|3433903_3436465_+\|transglycosylase-SLT-domain-containing-protein	gnl\|CDD\|381604	cd13401, Slt70-like, 70kDa soluble lytic transglycosylase (Slt70) and similar proteins. Catalytic domain of the 70kda soluble lytic transglycosylase (LT)-like proteins, which also have an N-terminal U-shaped U-domain and a linker L-domain. LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. Proteins similar to this family include the soluble and insoluble membrane-bound LTs in bacteria and the LTs in bacteriophage lambda.	6.82173e-64
NZ_CP012159.1\|WP_050430677.1\|3444796_3446383_-\|CotH-kinase-family-protein	gnl\|CDD\|378045	pfam08757, CotH, CotH kinase protein. Members of this family include the spore coat protein H (cotH). This protein is an atypical protein kinase that phosphorylates CotB and CotG.	8.55898e-78
NZ_CP012159.1\|WP_082362431.1\|3443072_3444593_-\|collagen-like-protein	gnl\|CDD\|236090	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated.	1.12468e-13
NZ_CP012159.1\|WP_050430668.1\|3426372_3428004_+\|S8-family-peptidase	gnl\|CDD\|173790	cd04077, Peptidases_S8_PCSK9_ProteinaseK_like, Peptidase S8 family domain in ProteinaseK-like proteins. The peptidase S8 or Subtilase clan of proteases have a Asp/His/Ser catalytic triad that is not homologous to trypsin. This CD contains several members of this clan including: PCSK9 (Proprotein convertase subtilisin/kexin type 9), Proteinase_K, Proteinase_T, and other subtilisin-like serine proteases. PCSK9 posttranslationally regulates hepatic low-density lipoprotein receptors (LDLRs) by binding to LDLRs on the cell surface, leading to their degradation. The binding site of PCSK9 has been localized to the epidermal growth factor-like repeat A (EGF-A) domain of the LDLR. Characterized Proteinases K are secreted endopeptidases with a high degree of sequence conservation. Proteinases K are not substrate-specific and function in a wide variety of species in different pathways. It can hydrolyze keratin and other proteins with subtilisin-like specificity. The number of calcium-binding motifs found in these differ. Proteinase T is a novel proteinase from the fungus Tritirachium album Limber. The amino acid sequence of proteinase T as deduced from the nucleotide sequence is about 56% identical to that of proteinase K.	7.36816e-128
NZ_CP012159.1\|WP_156338131.1\|3438396_3439151_-\|IS5-family-transposase	gnl\|CDD\|379129	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096).	2.20203e-30
NZ_CP012159.1\|WP_050435868.1\|3423853_3425029_-\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|223699	COG0626, MetC, Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism].	0
NZ_CP012159.1\|WP_050430679.1\|3447711_3448662_-\|NADP-dependent-oxidoreductase	gnl\|CDD\|176191	cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction.	5.17348e-113

>NZ_CP012159.1|WP_156338531.1|3436573_3437860_+|hypothetical-protein
MARVGNRRLALRDRTLRVHAYRDARLFGAVAAWSFFAFALLTTVSIGFPIVRHLPLFTSLLALSIILLTGFAIAAALIWIGAAWGAASHRASIRISDALYAERGGRRLEIPVAAIQRAHLRRRNRILTLVTDLGTTLSISIRGRNEALHLLDTVARAGATASWRARVYLPAPPRAREILSLAYGAAVVLLVDLLPGTTTSFATACGALFGVTTWFIAQLTGFPRRRADLLVGRDGLAFRRHGRERFIAFARIQRAEPTERGVRLVLSSGEHVEFDLTPPALRRAAESLTSALCARRCAHLLHLIEEPRALSETSPVADELLARRGRPLPDWQAALRGLVTDEGATYRTVTLAPERALQVLEDGRAPLELRIGAAMALAPTRERNTSRRLRLAIATSASEEVRTALEEAAEGELQEATLARARMAVGDG
>NZ_CP012159.1|WP_050430672.1|3433903_3436465_+|transglycosylase-SLT-domain-containing-protein
MRTALTAALLGLLALGATASGCAEQRAAGPPPAQSTANVPMTAPSAGPQGTPPLLAAAVALTPPASRAPTPSWVDAMRLDRFAEAAEQLDTLPEADRARPEVRYARARVALALDDPELAVSLLHALEAELPLLAADIARHRAEAAFEAGPHAEAAAYFASSKSPRDLPRAAEAYARAGDIPQALAFANRAVAAAQRSKNKNDEAVARLARAHVFRLAAAPRPQKPRGTGPILTAPAAARVTRTVPRIEPLPSSPVGAMASAGAATSAEATSTSAGATAGSAPTAAPWAPWAPTAATPRPPRPHAATAKLPAPPAALADLRWIARSAPTTPSGQEARETLALLGTPLTPAERLDIADALLAGGRPAEAVVELTKLGPSATLTRPDLQHRRATALYRARDNAAAARAFLEAAASPTPRQPEQLYYAARSFLRQDQKNDAITRLREVVAKFPRTSWADDASYLLGQIYLQTGRYAEAAKQYTQFLGRAPRSNRRHDAEHDLALALISSGDPAGARTRLATLAKNARRVDDTARLKELEGLAALRAGDRAGAIQLWSDVMRSYPLSWGALTARARLVAAGAEPPPLLAPPTTTPPAPLAIQLPPTAALLTSVGLDADAERWVADNERTVSAPYGARSGEALCSLYGELTRAKRRYRVGVNAVAYDTLKRAPSDAERWAWECLYPQPYLPIVNTLEDEQGVPRALIYALMRQESAFDPVVVSPVSAVGLMQLMPTTAARAASEMELPFEPRSLERPEINLRLGTYYIAKLLRMFDGSLPLAAAAYNAGPQAVASWLADGVEQDTDLWVARIPFGETRHYVSRVLANLARYQWLAGGDAAVPLAPLTIPTGIRAPSDAY
>NZ_CP012159.1|WP_050435870.1|3432131_3433226_-|histone-deacetylase
MVDDPLFDEHQARGHHPERPERLAAARRAVERCVDEGLRPLMLTPRDATDEEILRAHEPAYLKTLQELEGQWTMLDADTYLSPVSLSASRRAAGGALSLVDALLDQPSPSAAGASSPSVGFALLRPPGHHATRRVGMGFCLLDNVAIAAYGALQRGLQRVAIVDWDVHHGNGTQDIFWQDPRVLFISLHQWPFYPGTGMTTEVGEGEGRGYTVNVPLSEGANDAVYCAAFDQIVLPVLAEYAPELILVSAGYDAHERDPLASMRVTASGYGSMTKKLRAAARTSAEGRLGLILEGGYSLTALETSVAATLRALTADAPEVAGGDGDGAGRDESEDVELHGPVSPRHQSEIDRARRHAQRHWPNL
>NZ_CP012159.1|WP_050430671.1|3430628_3431024_+|VOC-family-protein
MAATIDHITINVRDRAASTKFYEKVLAVLGIKLHLVHGAFAGFGRGKPEFWIAEGPGAFQTAEHLATITPVHVCFSAETCEEVDAFYRAALEAGGKDNGAPGIRAQYHPGYYGAFILDPDGHNIEAVCHFG
>NZ_CP012159.1|WP_050430670.1|3430257_3430578_+|HNH-endonuclease
MAIVKSPPEQPEPCPLCQRPNHHPSDHHLVPKSRGGRVTETLCADCHRGIHATFTNKELESTYNTAEALLSHEGFRKMVEFIAKQDPGGKVRMRVTKARGTRRRSG
>NZ_CP012159.1|WP_179955534.1|3428542_3430036_+|matrixin-family-metalloprotease
MTGVGCVADSVDEGDGVDEVGTNLMSFEEFEASVYREKDSGVYIVNGDEPIADIKLLREYWESHVREGALIVHRRGSADAKWNDTQKVNITYCVSTTFNNNHNTVVQAMASAAAAWEAVANVKFVYLSNLNSNCTASQSGVVFDVRPVNAGGQYLARAFFPGDSRSVSNVLIDSSSFSTSPPLTLTGILRHELGHVLGFRHEHTRLSSTGCYEDSNWRELTTYDAASVMHYPQCNGTGDWSLTLTQRDAQGAALLYGQPGSGGSGGSGGSGGSGGSGGSGGSGGSGGSGGSGGSTTQNVSGSVSTNQFVQVGSFDVTAGTTFSAVMTGTGDPDLYVRFDAAPTLSAYNCRPYAAGASETCTLTVPSGTTKAFIGVNGYTSGTFNIAATYTPPASGGGTVRNVSVSGSVAAGANAHHGPYAVIPGTPFTAAMTGSGDPDLYVQFGAQPSLSSYACRPYLSGASESCNLTVPAGQTQAYVMVNGYTSGSYSVALTHTSP
>NZ_CP012159.1|WP_050430668.1|3426372_3428004_+|S8-family-peptidase
MSQVWKFIYKTTIAPFFILTTVGCISDSPDADGADERELDGLLAEARHDDAPTRAKLRIPLTDLGLIKGTYIVRLAENAVQQDDPGKVMVAERRRRLAEGMVARVGLPKAALRHVYESALNGFAADMTEAEALQLADDPAVEFVEQDQVMQTTLAWGIDRIDQRSLPLDDVYTPGHADGRDVHTYVIDTGIRATHNELAGRVGPGRDLVDGDDTPVDCHGHGTHVAASLAGKTHGVAPGATIHGVRVLNCNGSGSNADVIAGIDWVRLNHVKPAVANLSLGGGVSQALDDAVASAISAGVTFAISAGNDNKSACDSSPARTPSAITVGSTTNTDGRSSFSNLGQCLDIFAPGTNIVSAWYTSNTATKTLSGTSMASPHVAGAAARYLSSHPSASPQEVRDALVQAATVDKITGAGTGSPNRLLYVGIETAGPPPSPSPSPSGSLRSGVPLTGLSAPVGAWIHHTFPVPAGAARVRFQMSGGVGDADLYVKRGAQPTVTSYDCRPYLLGNVETCTSNNPAEGMYHVSIRAYGAFSGVSLAANLE
>NZ_CP012159.1|WP_050435869.1|3425042_3425894_-|protein-kinase
MMYPAPEGTALFEHLGAGSVFDVALVQHGGRLLVCKRLNSRALREPAGRAALVREARVLSLVRHPALPELTRVGSDGHGPFILQTRQPGVSIRSVLEGWQARGRRPPRALVNHVVRTALEVLAEIQALCRVDGGGPLGLIHGDITPDHVLLGPIGDVRFVDLGAARFEGMPADLATDDRGTLPFVAPEVARGESAPTQAADLYSLAAALAWFTTGEALTRAREEAAALAEIGEHGLLLDPLKDDTTLAAGARDVLLRALARDPDERPCARALLDALDDEGNER
>NZ_CP012159.1|WP_050435868.1|3423853_3425029_-|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme
MKPDRSYQGLSLDTLAVHAGQPPDPTSGAVMTPIVLASTFAQERPGQHKGFEYSRSGNPTRKALEDCLATIEGGKHGLAFSSGSSATAVLLHTLRPGDHVLAGDDLYGGTFRLLDKVMRPMGIGSSFLDLHDLDRVRAAITPATRMICLETPTNPMLKVFDVAALATIARERGVTLVVDNTFATPVLQRPLELGAHVVLHSTTKYLNGHSDVVGGALITSDGALAERLAFLQNALGAVPSPFDCYLVLRGLKTLGVRVRAQCATATTIATRLEQHPAVERVYYPGLASHPDRALIDRQMKGPGAMISLVLRGGLPAATAFLEGLQIFSCAESLGGVESLAEHPAIMTHASVPEASRSALGISDGLVRLSVGLEAEADLWGDIEQALARATR
>NZ_CP012159.1|WP_156338530.1|3423189_3423774_-|hypothetical-protein
MSLPRIALIPVFGIASLFAYGCSDPPPPTPRGGFDVQWLDSPPAECQLNTHRAQVGSPTATDPGEKISDGQNGASVECTVSGSGTYLVKGRIQQDLNILAVTVSSLSSSASRAAPAKGSVTFRSKELQAGSVNSDADEPCDFWFPDERPDDQRVSGGKAWLVFSCPKMNHLQGSVCALGESYVLFENCDLGEEE
>NZ_CP012159.1|WP_156338131.1|3438396_3439151_-|IS5-family-transposase
MAVRRQLNDQQWLRIESFLASERGRGRPALDDRLFVDAVLWILRTGAPWRDLPTEFGPWQTVFNRFDRWSKTGKWQRLFKVLQTDIDDEWISIDSTIVRAHQHAAGAKGGSQGQCIGRSRGGLSTKVHLTVDALGLPLDFIITEGQRHDIIAAPELIARSAPRCLLADKAYDTNDIRAQLDALGAIAVIPSKVNRKPQIPHDQHLYKERAAVECTFNLLKGARRLATRYEKTVRNYAAIVTLACVLCWLRI
>NZ_CP012159.1|WP_050430675.1|3440809_3442726_-|serine/threonine-protein-kinase
MNIASGTIVGGKYRIERPLSRGGMGSVWAGRHVALGSPVAIKFMAAEYAALPTFVGRFEREARIAANLRTPHVVHVGDYGIERGNPYIVMELLQGEDLAARLERVRRIPLHEALRILAQVAKALRKAHEAGLVHRDLKPGNIFLTTVEDEEVVKVLDFGIAKETRRRRGRKDGERRRRGEIAEWELTRTGELLGSPYYMSPEQVRGDKDIDHRSDLWSLGIILFRVLTGELPFAGDDFGSILSRILVDPVPRATSAAPHLPEAIDGFFQRCLERDRTKRFQSVSDMLEELYRVADLQPPITSLIERRLQLVEEQVTLIAGSVPGRRSGVDWHAQAPPPPSRTCADAIPTMKQTRRELSTQHETYADGSSDQHLHTTAPSTVTKRSMPPSEELAVLPYTSASTWIAPVAIVVAIAGTILAGWAMTKPTSGVGHHEPPQGSAPHHLELPAPLEDPPRAMPPPPHDPSEPAPTTNHPPPRSLPPKTPYDTPRPTGTPLHRRARADVTPAPSAPSSQARDPSLRTSSSKERIGIEPPGPSSEVDAEAASFTEGPPFPESMAQRQLDQAALQARSCATQTSEKGGGRLQVQFTPNGTVNEAIVMGPPFAHTEIGRCIEAKFRALTIPRFNGAPVRRYQLFSLP
>NZ_CP012159.1|WP_082362431.1|3443072_3444593_-|collagen-like-protein
MRASVLLAGLLALSASLPACSSDDLPADAECVKDAECSGAGAVCLSNKCFQFVADCAQCAGETCTDRCLAGVPGPPGVAGATGPAGPEGAQGTPGEAGPAGAQGADGSTGPQGEPGPAGPVGPTGQAGAPGSMGPMGPAGPQGAAGPQGPAGPAGATGAQGPAGATGAQGPAGPSGATGAQGPAGTVGAQGPAGVAGPAGPMGPAGPTGPAGAGAPGPQGAPGQPGPPGTLYGEEAALFVGFTSTQMEGAVGSREQMHAICSAQYVGSHFCHVAEYYGAGAASPVPASGAWVDSSGAISVSSGTVYSLSTLTGPRSGRNSSSNDSANCANWTSNTYQSGQYTYNASGMTVSVGGPQTGLCNAARPLACCATPYREAFAGFSSASTVGEAGGRESMHARCANEFTGSHMCHAAEYARATPTTLPPAEGAWLDSSSYFANNTVYTISGLGSMDGGRMAGRSDSSNCANWTSNTYQSGQYTYNSSGLTATRTGFSTNLCNVARPVACCY
>NZ_CP012159.1|WP_050430677.1|3444796_3446383_-|CotH-kinase-family-protein
MRHPRLPLATIALVLGALPALGCSDDSGDPTDGKTNSTTTTEPEPAALCQPSGGGPHWLLEGETVIFQVGCATDMVLPDDAFEVTSLPEGATYDATKREVAFSPGFDQAAVYEVEIHVAETSETAQVKIGVADAWDHPSNVPVVDPTRYTEEYGLPVLFLQQRPVTDEYVANTFIYRGHTYTAEAKLRGASSLGYPKNSYTLKFSKQDRFQEPDEADGFTNKRKIVLTTPFDDNSYVRQRLAYDLWNRLDPGHVQIQTYSAVVYIEGEYWGLYTVGDHVDKDLMEQHGFWDDGNLYKAINHDANFDTRASGGGPKGALHAGYEKKEGFPEEGEPGAFSDLEELVQFVATSDAATFRSQIGSRIDRRDYENWWIFVTFIKGSDSAGKNSYHYRDPRSNGVFRFMPWDFNESFGQTWQSERTGASEVIEYRNMNRLFDRFLEEPSIAGPLKARYAEVLHGVYSESAVQALVDGYIARIDTSARRDEQKWGQAYQTYGGWAWRNNFTTYEEEVAYLKAWISERWRFQDALY
>NZ_CP012159.1|WP_050435871.1|3446477_3446846_-|ribosome-binding-factor-A
MSRGRSRSRDEAAPIMGDDPFTGMVASKAERKERQLCRQAHEALSEALATLNDSILLEVWVAAVEPAPDGSRLAVIVQAPRGAPLDEVKERLERVAGYLRSEVASAIHRKRAPTLVFQVMPP
>NZ_CP012159.1|WP_050430678.1|3447145_3447685_-|hypothetical-protein
MKTDLRRPTLRQYLSTGVALALALTGAACIVTTSSSGEPSGACTQIGCGGAFSVEFARNGAWPAGTYRVSVETDGATVDCTTTLPFSGCSEAPACTSTPGFILGLSGCALPASEHKLSGIEFPQTTPSSPPARISVKVYADETLLGEGAYTPTYTTSQPNGPDCGPTCTGAPPVVLTLN
>NZ_CP012159.1|WP_050430679.1|3447711_3448662_-|NADP-dependent-oxidoreductase
MNQGVPVSTRAARVHSYDVLQRVRVEDAPDPVAGAGEVLLDVAAAGVNPIDWKIVEGYLKDLLGDRFPLTPGVEVCGTVAALGEGVEDLALGDTVFGLIGLTGGYATRIAVPARFLAPKPRSLSHLEAGASAAAALTAFQAVHELGKLTPGQRVLVHAAAGGVGSFAVQMARIAGAEVIGVTSAGNEAYVLGLGASRVIDYRTERFENLVAEVDLVLDLVGGDTLERSWDVLKPGGLLVSAISPPDPARAAAVGARGIHLVSRSDSAQLREIGGLFDSGKLRLTLAGVFPLDEVVQALEISKAGRVRGKLVLDTRS
>NZ_CP012159.1|WP_050430680.1|3449323_3450037_+|hypothetical-protein
MSGLPKSMKWIATMATGFIVAAAACATGTDLAPGSPDPSLCDIICDCVECNDDQAACLKEWTALENRAVGVRCDDLYDAYVACYKRDAVCNNEQMRVPPSCLSASGALNQCLTESTPVCTTTNNGVCDEPEGTGTCAEGTDVVDCGGGPVCATTNNGVCDEPEGTGTCAEGTDVVDCAAAGNCPYVNDTVCDEPEGTGACPEGSDFADCNCPYQNDGECDEPEGTGACPEGSDPFDC
>NZ_CP012159.1|WP_050430681.1|3450085_3450754_+|uracil-DNA-glycosylase-family-protein
MSLPRQQPEPTDFETITAALRACRICRDAPENLPGLPHEPRPIVHGQSSARLCIASQAPGILAHTSGKSFDDPSGVRLRAWLGIDETVFYDGRRVAIVPMGSCFPGNDAKGGDLPPRLECAPRWRTSLFAALPHLELILVIGQYAQAWHLGEDFDGLTSTVKRWEAILSSERFPRVLPLPHPSWRNNAWLKKNPWFEAELLPVLRQQVAAMLAFPAEASPAP
>NZ_CP012159.1|WP_050430682.1|3450772_3451660_-|hypothetical-protein
MKPEAPRPSKQATAPTPPEETPEARPTWHAVDVVGVMAAVLPAIVRVPSRREKTVVSTIEGRTFESTTVEETDSVALIGGGIALACAIAGVLLFRTFAPKRRPLRIGIALMLVILGGLHVARGAGAFSGRDEGPLTQIGGPPLPASVEAPPLADHEALGVWVRSLFPTFPISAVRCPPFQPTTAEVTCALDIPGSASIDLVLGRTETDWKILSPKRIYTARNLAAELTLDLSSKMKTEVVVDCGTGLILVTGNYRHVCAASRKSSPEPRQVDVAFGKIEVTFKPDQGYTWAATAL

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Crispr_ID: NZ_CP012159_14

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012159_14

3516762-3516872

Unclear

Consensus_repeat	Method
GCCCAGGGACCCACCTCCTCGCAGCCC	CRISPRCasFinder

1 spacers

cas3,cas5,cas7,cas8b2,cas6,cas2,cas4

The CRISPR arrays of NZ_CP012159_14

>merge|NZ_CP012159|14|3516762-3516872|CRISPRCasFinder
GCCCAGGGACCCACCTCCTCGCAGCCCAGCTCGCTGACGGACGTCCAGGGACCCACCTCCTCGCAGCCCAGCCTGCTGACGGACGCCCAGGGACCCACCTTCTCGCAGCCC

>NZ_CP012159|14|12|3516762-3516872|CRISPRCasFinder
GCCCAGGGACCCACCTCCTCGCAGCCC	AGCTCGCTGACGGACGTCCAGGGACCCACCTCCTCGCAGCCCAGCCTGCTGACGGAC
GCCCAGGGACCCACCTTCTCGCAGCCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012159.1\|WP_050430719.1\|3501727_3503161_-\|phosphoenolpyruvate-kinase	unknown	unknown	gnl\|CDD\|367449
NZ_CP012159.1\|WP_050430733.1\|3527810_3528725_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|235737
NZ_CP012159.1\|WP_050435874.1\|3505648_3506923_-\|PQQ-like-beta-propeller-repeat-protein	unknown	unknown	gnl\|CDD\|224437
NZ_CP012159.1\|WP_050430732.1\|3527430_3527793_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050430734.1\|3528800_3529703_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176161
NZ_CP012159.1\|WP_156338541.1\|3522593_3523850_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225921
NZ_CP012159.1\|WP_050430731.1\|3525223_3526711_+\|C39-family-peptidase	unknown	unknown	gnl\|CDD\|366659
NZ_CP012159.1\|WP_050430724.1\|3512686_3513457_+\|CRISPR-associated-protein-Cas5	cas5	cd09693_cas5_CAS-I	gnl\|CDD\|273860
NZ_CP012159.1\|WP_156338542.1\|3524645_3525188_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050430722.1\|3510006_3511590_+\|hypothetical-protein	cas8b2	cls000029_cas8b2_CAS-I-B	unknown
NZ_CP012159.1\|WP_050430718.1\|3497504_3501743_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|270916
NZ_CP012159.1\|WP_156338543.1\|3526815_3527169_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050430723.1\|3511586_3512687_+\|DevR-family-CRISPR-associated-autoregulator	cas7	cd09687_cas7_CAS-I-B	gnl\|CDD\|274215
NZ_CP012159.1\|WP_082362443.1\|3506990_3508325_+\|dicarboxylate/amino-acid:cation-symporter	unknown	unknown	gnl\|CDD\|366058
NZ_CP012159.1\|WP_050430727.1\|3517885_3518482_+\|CRISPR-associated-protein-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	gnl\|CDD\|273040
NZ_CP012159.1\|WP_063796550.1\|3503340_3505578_+\|alkaline-phosphatase-D-family-protein	unknown	unknown	gnl\|CDD\|226070
NZ_CP012159.1\|WP_169796527.1\|3508332_3509019_-\|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	cas6	mkCas0066_cas6_CAS-I:CAS-III	gnl\|CDD\|337605
NZ_CP012159.1\|WP_169796528.1\|3517529_3517889_+\|CRISPR-associated-endonuclease-Cas2	cas2	pfam09827_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|378256
NZ_CP012159.1\|WP_156338540.1\|3518943_3519111_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050430725.1\|3513453_3515958_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124

Protein	Function_ID	Function_description	E-value
NZ_CP012159.1\|WP_050430719.1\|3501727_3503161_-\|phosphoenolpyruvate-kinase	gnl\|CDD\|367449	pfam03328, HpcH_HpaI, HpcH/HpaI aldolase/citrate lyase family. This family includes 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase and 4-hydroxy-2-oxovalerate aldolase.	5.45206e-06
NZ_CP012159.1\|WP_050430733.1\|3527810_3528725_-\|SDR-family-oxidoreductase	gnl\|CDD\|235737	PRK06197, PRK06197, short chain dehydrogenase; Provisional.	2.93422e-112
NZ_CP012159.1\|WP_050435874.1\|3505648_3506923_-\|PQQ-like-beta-propeller-repeat-protein	gnl\|CDD\|224437	COG1520, COG1520, FOG: WD40-like repeat [Function unknown].	0.00624119
NZ_CP012159.1\|WP_050430734.1\|3528800_3529703_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176161	cd08472, PBP2_CrgA_like_3, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding fold. This CD represents the substrate binding domain of an uncharacterized LysR-type transcriptional regulator (LTTR) CrgA-like 3. The LTTRs are acting as both auto-repressors and activators of target promoters, controlling operons involved in a wide variety of cellular processes such as amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to name a few. In contrast to the tetrameric form of other LTTRs, CrgA from Neisseria meningitides assembles into an octameric ring, which can bind up to four 63-bp DNA oligonucleotides. Phylogenetic cluster analysis showed that the CrgA-like regulators form a subclass of the LTTRs that function as octamers. The CrgA is an auto-repressor of its own gene and activates the expression of the mdaB gene which coding for an NADPH-quinone reductase and that its action is increased by MBL (alpha-methylene-gamma-butyrolactone), an inducer of NADPH-quinone oxidoreductase. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	3.71632e-72
NZ_CP012159.1\|WP_156338541.1\|3522593_3523850_-\|hypothetical-protein	gnl\|CDD\|225921	COG3386, COG3386, Gluconolactonase [Carbohydrate transport and metabolism].	6.44925e-06
NZ_CP012159.1\|WP_050430731.1\|3525223_3526711_+\|C39-family-peptidase	gnl\|CDD\|366659	pfam01471, PG_binding_1, Putative peptidoglycan binding domain. This domain is composed of three alpha helices. This domain is found at the N or C-terminus of a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. This family is found N-terminal to the catalytic domain of matrixins. The domain is found to bind peptidoglycan experimentally.	2.50554e-05
NZ_CP012159.1\|WP_050430724.1\|3512686_3513457_+\|CRISPR-associated-protein-Cas5	gnl\|CDD\|273860	TIGR01895, conserved_hypothetical_protein, CRISPR-associated protein Cas5, subtype I-B/TNEAP. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This family is represented by TM1800 from Thermotoga maritima. It is related to TIGR01868 (CRISPR-associated protein, CT1976 family).	3.91362e-20
NZ_CP012159.1\|WP_050430718.1\|3497504_3501743_+\|AAA-family-ATPase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	2.47143e-62
NZ_CP012159.1\|WP_050430723.1\|3511586_3512687_+\|DevR-family-CRISPR-associated-autoregulator	gnl\|CDD\|274215	TIGR02585, conserved_protein, CRISPR-associated protein Cas7/Cst2/DevR, subtype I-B/TNEAP. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This clade is a member of the DevR family (TIGR01875) and includes the DevR protein of Myxococcus xanthus, a protein whose expression appears to be regulated through a number of means, including both location and autorepression; DevR mutants are incapable of fruiting body development.	1.19133e-41
NZ_CP012159.1\|WP_082362443.1\|3506990_3508325_+\|dicarboxylate/amino-acid:cation-symporter	gnl\|CDD\|366058	pfam00375, SDF, Sodium:dicarboxylate symporter family.	5.05025e-110
NZ_CP012159.1\|WP_050430727.1\|3517885_3518482_+\|CRISPR-associated-protein-Cas4	gnl\|CDD\|273040	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4. This model represents a family of proteins associated with CRISPR repeats in a wide set of prokaryotic genomes. This scope of this model has been broadened since it was first built to describe an archaeal subset only. The function of the protein is undefined. Distantly related proteins, excluded from this model, include ORFs from Mycobacteriophage D29 and Sulfolobus islandicus filamentous virus and a region of the Schizosaccharomyces pombe DNA replication helicase Dna2p.	3.67384e-33
NZ_CP012159.1\|WP_063796550.1\|3503340_3505578_+\|alkaline-phosphatase-D-family-protein	gnl\|CDD\|226070	COG3540, PhoD, Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism].	8.47851e-60
NZ_CP012159.1\|WP_169796527.1\|3508332_3509019_-\|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	gnl\|CDD\|337605	pfam10040, CRISPR_Cas6, CRISPR-associated endoribonuclease Cas6. Cas6 is a member of the RAMP (repeat-associated mysterious protein) superfamily. It is among the most widely distributed Cas proteins and is found in both bacteria and archaea. Cas6 functions in the generation of CRISPR-derived guide RNAs for invader defense in prokaryotes.	9.9471e-09
NZ_CP012159.1\|WP_169796528.1\|3517529_3517889_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|378256	pfam09827, CRISPR_Cas2, CRISPR associated protein Cas2. Members of this family of bacterial proteins comprise various hypothetical proteins, as well as CRISPR (clustered regularly interspaced short palindromic repeats) associated proteins, conferring resistance to infection by certain bacteriophages.	3.98851e-13
NZ_CP012159.1\|WP_050430725.1\|3513453_3515958_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	2.09878e-63

>NZ_CP012159.1|WP_050430725.1|3513453_3515958_+|CRISPR-associated-helicase/endonuclease-Cas3
MKDPLAHVWAKSVPPSAPSAGTSSPRPNLRRGEPLKGHTENLLTRLAAWRDRFPDLPRFTDRADLWDLAAWSCLLHDVGKIARAFQRMLQGGARFHHRHEVLSLVAVGWLDLPDADRALIAAAVATHHRDVTAIFALYPGPTSPDLADLLSELDPDDEPRLRSWLTPGAGGPDPTRCGFAALPPLRPLSPFDAIDASLSALQQLADDIALRDATSPTSLTVRALRGLVQLADHAASAHQHFGRAPTLDSPAALLAQLQRSARTTPRPAGASPSPGSPSEPPSPAAALPEPPTPPSTPPEASLTDQPTFDLHPHQRTAAATLGHAHLIAPTGSGKTEAALLWATAQRQALAPAAPPIFYVLPYRASLNAMHTRIHERVGVDRDAVVLQHATATAALYGYLLEHKGYTPDHAARVAARERDLGRLMTAPVRVLSPYQLLRGCFSLRGHEALLTDAAGGLFLLDELHAYALDRLAFLLAALQHLACDLGARLFAMSATFPRVLRDALDDLLSTPACAAPFRSIVAAPETFDAFRRHHLHLDDRDLADDATLDTIARTVTAGQAVLVVATTVRRAQTLYTRLRDRLDPGASDPDRVTLLHSRFTARDRATKERALAARLGTRTRAKDTPGLVVVGTQVVEVSLDVDFDRLHTDPAPIEALVQRFGRINRGRRHRHCDVVVHRPSPPSSQFVYEPRLVDRALDILGPHSGEPIDERHVQTWVDAAYAPDADRWRKELDQRIRDARRDVLRVNRPLDSHEELRASFDAFFDGAEVIPEALRAEHQRLLVERPLEAATLAVPIHPGTYHSLSRKGLLRTQDRVTYARVPYDATSGLDLGAS
>NZ_CP012159.1|WP_050430724.1|3512686_3513457_+|CRISPR-associated-protein-Cas5
MRLARVTLHAPVASFRHPFFVTGRQPTFDIPPPSTLHGLCAAAAGTFPDPTTFLFGVHFTYRARAQDLEHQHLASALPPGTRITVPTPTGSQRATTEISVQPVLRDFLFDTTLTLYVAPDLASAFHAPVYPLVLGRSQDLAEVLAIDLVTLERADRLRLDHTLLPFALRPAVRFGTTVLLTRHITEAPERKATFSQYIVLHEPVFLGPDANPERRLLHVDGLSLDDLWTDPAHLDDDGFARGVWIHHLQPPTPPTP
>NZ_CP012159.1|WP_050430723.1|3511586_3512687_+|DevR-family-CRISPR-associated-autoregulator
MSHVTGSLIIDAPASALNNAGKDEEARTDNAVAVKFIRAPEGRYPYVSAQAVRYWLRTQLAASPGWSASPVFRETKVAYTDAEPTLYDEDDLFGYMRATSKSTDEKKAAKRAEIAARSTPVDPEVGEVTRISPLRIGTLVAITPTARLPRDFGTMARAEGDPVPHEHQFYRAHLKAPFALDLTAAGTFFVSQRVGYKNLDKNRIDSAKKAGATALQVRGFSAHRLPLPLRRRRVAQVFRTLGRLEGGAKQTLHLTDTAPAALILAVTRSGNQPFQRVFSPDPLGERTTFRADVLEEALRVYRDDFLSGVYIGWSRGFLDSERQKLDTFLASAASHHGIALHVGHPREMADAFAAALESDAAAPWFD
>NZ_CP012159.1|WP_050430722.1|3510006_3511590_+|hypothetical-protein
MKPLHWTGHALIDVGIAGLCAFAGRERPEDLTDDDLDAATDLMASEYYSGRLATFLTCVFMNASFVQPKETPAKREAFIRQYLRAHRAAPDPRVSGLACVFSGRAATVPLVRTHFPLFSGEDVLNFRPEGQTFLPAAGPFVVALFFLPLASRRSEGRLLAVHADDPALTIRFAAQYLEDNRRLLTLALPTERALVHAGYDREQPMWDATKKQYKFADAKGPRSLVVHDLSKLAQAVSSGFRRDRPPTGLSAYLLSNSGQGPSLDIVHIPSAAVGFIVKAAGASTASAWKALTERYLSVRSTDDTGETNSSRARGKKTPSIPGRAGWTRNLAFEDLCAIFDAGFTDHRAAAFWLRRHVLGQLQTRESNEASTDASTSRPHADLHGIRYDKDARSRSWALAELFLKEIMGMKKERLEIIRAFADKLADRIQTKNEVSLRRAVFFEDAWGLRRRLVIEQRKSYEEKGPLLFGLDEFAAVWLSTENDDRLVRDLIAIRVIERLHDLGVDAEAVLSTEPNDGESSSTEEFAS
>NZ_CP012159.1|WP_169796527.1|3508332_3509019_-|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6
MSAGVDRREGAASLVLDAHVVGRAHAEAPLLLATLRGMGDAGLGARRTRMSLVSVEALDGRGLPCGTALDPVGGRLSAVAPGVRARELVRPGDETARVVRVRYVSPTWLKEGGEVVREPRFGALMRRLRARLGALATVFGEREVDEDPRAMAAAADAVAMIHQAVTWYGQARRSTRTGQTHPLEGFVGEAVYQGELGRFLPMLRLGELLHVGKHATFGLGRIEVEVLG
>NZ_CP012159.1|WP_082362443.1|3506990_3508325_+|dicarboxylate/amino-acid:cation-symporter
MSPQQKMLLGIGTGAAAGLAANALAAGAPWLTWVIDHITFPVGQIFLRLLFMLVIPMLFSALVMGISELDLRHLGRLGARSFGYTIVISTVAVLIGLGLVNFIRPGAGLPESLRAMAQGSVVEAAAAPADTSPVALIIAMFPDNPIKAAASGDMLAVIVFSLFFGVGLSLARTPATAHLRESIQGLYDVVTRLLDAVIALAPIGVAALLFTMTSRMGVAILVQLSAYVGTVLLGLGLHMFGVYSLSVRFFGGMSPIAFFRGSRTAILTAFSTSSSSATLPTALRVAEEDLGLPPHVSRFVLTAGAAMNQNGTALFEGVTVLFLAQLYGVDLALGQQAIVMVICVLGGIGTAGMPGGSLPVVAMILGMFGIPPEGLGLILGVDRFLDMCRTTLNVTGDLAAAVYVSRGEPHDPGDHDGQGGAGGAGGEGATAGQGITEGLAGEGV
>NZ_CP012159.1|WP_050435874.1|3505648_3506923_-|PQQ-like-beta-propeller-repeat-protein
MGAGFSREKAPRALSKRRAAMVLGALTLPALATMALAEDVSTSRPATVVVGAPRGFAASDRLDARRTGSTWSALPVAPKELWRRHISGGMDASPLIDADGNVVATLTVPEVVKLGPEGRELWRVRIGSNAPLAPATLTSDGTLLLVTSAGVAWGLSPQGAVRFTTQLGVRGRDADVTPLALEDGGVVIAAGRSLVELSASGAVRGRAELQERAVGAVLAGPEGALVTTEPGEVLVWRRPGAPRRLGSFGGAPRRGAALADARTLLAVVDGRRLVGLDLRTGATSTRASGATGVGAFDAPPAVGAGGVAITGTAVGLLLGVDAAGGEPLRVAIDRPPPSIAADAGAGLSSFLGAVEGKPSPPVVVDAEGRVGFVRSAGRAGVVQPDGSVALATERVCATPVAVLPAGKHRMLVACRDGTLVMMGD
>NZ_CP012159.1|WP_063796550.1|3503340_3505578_+|alkaline-phosphatase-D-family-protein
MRRRDFLRATLVTAGAILAPSACGGDDDATSPECPLSEASEAFFPQSVASGDPRPDSVILWTRLADAAVSGDLPISFQVALDEAFTQVIALTTESNRRSVADDAAGVSLASLTAEERYGHCVKVKITGLSPATTYYYRFYYKSGDTCYASRIGRTKTAPAPDADVPVRFGYISCQDYIGRYYNSHRIMAREDLDFFVVLGDYIYETTGDPSFQSPSDTRKVTFTDESGAISLEGADGSTFFAARTLGNYRELYRTYRGDPALQRLHELFPVLPIWDDHEYSDDCFGATATYFDGAKDEHDIPRRKAANQAWFEFMPVDYMAGDDYEYNSDAEYLQDITIYRDFRFGKNVHLVLTDLRSYRDDHLIPEEAFPGAVAATEEALDTNLGNIPTVAKPYVEIDSYQGGIYKERLIAAAPAVGYDPAVITGDISVAYINRIVEMLNESSGPGDQTDLIDPEAPGLKLGISYFDLGKFGLNSSIGSRYLVDKNAFDALSQTEWNASGGENERVMGSEQEEWFLKTVESSDSTWKVWANEYCLAQLAINLVGQPVPADFQREFYLMLDGWDGFPNRRSAILGRIGAKENVVAITGDIHAFYAGRPTAISDGSRQVIEIVGSSASSKTFKEELESQVKADPILSQIPEAAFLASLIDSFLTNPTTNPNPTLAYANSGEHGFCVAEASSDEFMVTMHQMPISVIHDDYADREDELAGLFKKMQFKTMAKTKELFQFDEATSAWLRWDQATRTWE
>NZ_CP012159.1|WP_050430719.1|3501727_3503161_-|phosphoenolpyruvate-kinase
MPTLSADLITAMRARLESAGLGAGTVASSALGPAREPVHTVYGGAHLFRAETARKLGDLALRALEVFAPDASAFAAALDLPGGSSGAAGAARDTGDGAAAGSSGGAASGLHAAVYERVVAKLRREPVEDLRIDFEDGYGVRPDEEEDGHAVQAAREVARGLALGSLPGMLGIRVKALTPELCGRSLRTLDLFLSSLVAASGGSLPEGFVVTLPKVEAPEQVAALVEALEALEGALGLARGAVWVEIMVETPSAVVAPDGSMAVRRLCSAGRGRCVAVHFGPYDYTASLGIPASQQRLSHPACDVARGLLQVAVAGTGIRLSDGPTNVLPVEVHRGAQGALGEAEREENRRAVVGAWRLHAGHVRRALERGIGQGWDLHPAQLPARYGAVYAFYLEGLAVASQRLRNFLDRAAQATRVGAVFDDAATGQGLLGFFLRGVAAGALTEEEAVRGSTLSLEELRSRSFARIVAQRSGQPGA
>NZ_CP012159.1|WP_050430718.1|3497504_3501743_+|AAA-family-ATPase
MDEVTPFPSDPRSSSEGAGARQRAPERTLPSPGQPRPEATLQAVRPPSSPDAPTQTRAPTLAPAEEQPNARSRSSRSARRFQPQEKLGRFCIVSKLGEGGMGVVYKALDLERNHTVALKTLHRISPDSVSRLKNEFRAAVDIAHRNLVLLDELFVHDDIVFFSMELIDGVSFLEHVRDEAAVRVAHTASMSSRHLGDAAQLTTTHALPSEPPPRSGALPSQAAHLLRSVIPLVRIERLRAALRQLAAGVNALHAANQVHRDLKPGNVLVTPAGRVVILDFSLAASLSSTSAGKQDDTAGTPAFMAPEQVRGLPATPATDWYAVGVMLYQALTGRLPYEGSVDQIIKAKRKENPPRPPSALASGVPSDLDLLTIELLQFDPLLRPSGVDVEARLLGPQDRDAAAISSRAPASSRISNPPSSIPISASPSSQAPISAGSITATSPSSARPSATSRRFSSPFIGRETHLAALDAAYRAILEGSSATVYLHGRSGMGKSALVRHFLGDLRQRGDALVLEGRCYERENVPYKAFDSLVDAIAGHLQRLRLEQLALLLPEGAIELARLFPVLHSIETIGAAPPEPATDLDPVELRRRAFRALKRLLRRMGRARPLILWIDDLQWGDRDSAHLLAELLAPPDAPAVLFLGTYRTEEEGTSTFLRELFQAEAPSLDALILEVGALELTDASRLARSLLGEDNPEPSVRAGQIAQESEGSPLFVEELVRYTLEGGAARRAALDFSSAEEGPPASDPPESAVSLEALITARIADLSEGARQLLEVIALAGRPIPQGIATNALGAGPAVRGDLAVLRSSRLVRTRGSRDRDGVEAYHDRIRAAVLAAQTAAARASTHLLLARALEVSEDSEAAEPEHLALHFQGGGEFAKAATYAESAADRAASALAFDRAAGFYQLAVECKAALGVPTIDLASLQTRRADALANAGRCAEAAPIYLAASEGLPSLEAIRLHGRAAEQLLGSGRIGEGVDILAPALRKIGLTYPSTPGRALLLVVGRMLRISVRGRRFRERAEDTLSPEERLRLDLCWWATKGLLSFDSIRAASFLLKYVLLALQSGERRHIARALVFFGMITVYEGTRRGIRKGGLLMSEAEHIAAGFESPYLTGLFHGCRGIAAISAADFRLGLEHLAAGAEVLKNHCNGVRWEVGTCTTGSSSALLWLGEIHDLRRVAHAGLRDAEQIGDLFGIVELDLYCAVVDLAEGDTETARTRSSAAIARWYAHAFTYQHLFALKIELWCDLHEGHPHDARRRLEEAWSTVQASKILRVRLFALDVHFLRGTIALACAAEELAAGRPAHRHLRAADRDATFLTRLDFGRCGALGDLLAAGVLALSGDTSAAISRLDLAIDGLSVAGLSLHAACARRRKGTLLGSDAGRALIDDAEAQLHDAGIADPAAWCRLYAPG
>NZ_CP012159.1|WP_169796528.1|3517529_3517889_+|CRISPR-associated-endonuclease-Cas2
MNDRPRKPWKAERPGAALGRSEPGPAHLLAIFDVSDDRARRKLTELCKDYGLTRFQWSAFEGQLTRNRREELFDRGKRLLDDAVGGGRFFIVGIGAREQAESLRLDTPGRPAPAPKEGP
>NZ_CP012159.1|WP_050430727.1|3517885_3518482_+|CRISPR-associated-protein-Cas4
MISLRVSELRQYSFCPRVVWYRQVLGQPGRETGKMAQGRDAEAALQKLEVRRRLHRYGLEEASRRFDVPLQSEVHGLHGICDLVLELPGASPEAPRRAYPVEVKTTRGGVGRHHVVQLAAYALMLEASGVSPVERGYVLLLPADRVVEVPLGERERALVLRTAEAIRTMISCQRFPRATRYESFCPDCEFVNFCGDVL
>NZ_CP012159.1|WP_156338540.1|3518943_3519111_+|hypothetical-protein
MEGRTVIVEERSSIAEERSSIAEGRSVIVEGRLSIDGRTIVDRGRTIVDRWKDDQ
>NZ_CP012159.1|WP_156338541.1|3522593_3523850_-|hypothetical-protein
MVLFTLAMTACNPTCTANPSSQKSDETTIAAYIATAGGITVIERGAVSEPADLTGYITAMVLTPDGTLYTNGSESRRVRDGRVTELPKRFDDVALAPDGKVWMVTSTDVTLLDGDAISTIATPERPRAMAIPNDGAIFLIAGNDLYRRDGHAWTKDDALKRLVGPNEALKGLAAGPGGELYLVTPTAVYRRDPTGLWRALSLGAHPEVFTFGQVSSKGHLPLAMRTGLHLIDATGAVRKLDIPVEPTRVNAIAIDDADRLWLGAVTGLHIVSLDGKPLQHWPAGTLPGRATRIAVHRQGPPLPASPPAPILGSARGTVLVDGQPLAHAKVELCTDSAHGDTQCGRASGPLYAMTDAAGAFTLNQVPRDTYSFFAYERDGKRAFAPSSWIITASEKSRRPCCNTLTAGDTWDLGTIKIP
>NZ_CP012159.1|WP_156338542.1|3524645_3525188_+|hypothetical-protein
MLRLGSSFDVDVQLPWVADALSDPDPRTPSARADRLVARAMAYLQHVRGPGGAYVARARVQVLDGLPDLLRNPPPAGPALEAFTRSWLRDLYPRKYALAGDPAMHALVALGRAAAASYGLTTGHGGALVTLLAFVHGSGFADDPQASWATSILADDSRSEAHRVAHLHEAALGFLDAWMT
>NZ_CP012159.1|WP_050430731.1|3525223_3526711_+|C39-family-peptidase
MAGTDTDTDLDTATDTDANPDAANRAASDYEATNGCPCDYTVEVKVVTRAGEIPIQGAQVKLDGALLGNTNAEGEAGSSGQREEHSVQIEAAYVNAAENLKRETFQLRIDGIDALAGSYNLGESSNVILKIRDVLGTGTAALSGDADFEDRYPTEPDSVTFDAATRRFTVLVKMATLSLSVPYRNQNDGSETLVGVNATFSGDLLCMPTSTQMLFSYWGVQNAEGDSIDRNAVMQGTYDASSNKTTVFPTPWQRWDELRAWSRTVVSDPLSVGASVPNGRDNANVPSATANGMRDRLVLGEPFIVSIEGGHIMCIRGAVVDHADEVQWLISNDPYGNLNGVDSVYGGVDIGESVGAGGVNDPGDVSAVQDVLRSLGHYNGPVHGEVDDATIAAIRSFQNGGDGRVDPGGGTERRLNQTLGGRDNPWYSRDENEINTASGDGSARGKHVYYNGETESKPRRLRLNASSRLMILNRSPSLTREEVATRLTEGVVPRE
>NZ_CP012159.1|WP_156338543.1|3526815_3527169_-|hypothetical-protein
MSGVIVLGDNADWIVAGWVYDNVLAYIAEELEPSRRELAQLLLNSRTGVALGYCDLSGLDAGQFQSLAQAAARALSAVKKRGPSAFHYPSFYPGFVDRFEELRRLLEGDARLTTRPR
>NZ_CP012159.1|WP_050430732.1|3527430_3527793_-|hypothetical-protein
MHKYLLHAAYGWLTLTGVMHFVIDVVSQHLRGKHVPGTETTLYYGVHSAFALGQTVFGLLGLWLTFRARDVLSELPVVLLSLIATVGWLAVAVLFMEYWQPRFNAVFFGLLIVAGALTRP
>NZ_CP012159.1|WP_050430733.1|3527810_3528725_-|SDR-family-oxidoreductase
MTKWTTSSMPSQKGRSAVITGTGGLGLEDALELARAGGEVIIAGRNQQKGADAVAKVQAAIPAANVRFEQVDLASLASIIDFATRLKAQRKSLDLLINNAAVMTPPNRQETSDGFELQLGTNHLGHFALTAHLLPLLRNGQSARVVTLSSVAARDGALDFDDLQAQRGYQTMRAYSQSKLACLMFAIELHRRSEANRWGVTSIAAHPGISRTDLLHNAPGRWSGAGMARTFLWFLFQPASQGALPTLFAATSPEARAGAYYGPDKMNEMRGSPALAKVPPQAQDRAAAERLWRVSEQLTSVTFE
>NZ_CP012159.1|WP_050430734.1|3528800_3529703_+|LysR-family-transcriptional-regulator
MSLDLDALKVFVRVAELRSFTQAAQQLGMPKARASSHVQKLEAELGTELLQRSTRVVRATPEGEQLLKRAPGLLAEAEEIATLFRAGRALRGRVRVELPVRVACEYVIPRLPELLARHPQLQVEICASDRIVAALREGRDLVLRVGPVGEPGLVGRRIGEVPMMNCVSPSYLRQHGMPRTLEDLREHLIVHYATDAVPSFEYFDGKAYTELPMRSAVTVDNIEAYVAACVAGLGIVQVPRAEQEQLANKLVEVLPEFTARPVPISLLHTHGRAVPRRVRAVMTWLLEVLQPMVGEFVTSP

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Crispr_ID: NZ_CP012159_16

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012159_16

3522119-3522230

Unclear

Consensus_repeat	Method
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAAC	CRISPRCasFinder

1 spacers

cas4,cas2,cas1,cas3,cas5,cas7,cas8b2,cas6

The CRISPR arrays of NZ_CP012159_16

>merge|NZ_CP012159|16|3522119-3522230|CRISPRCasFinder
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAACTTGGCAGCGTCCTCCGCCGGGCCAGACACCCCGTCTTCCTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAACG

>NZ_CP012159|16|14|3522119-3522230|CRISPRCasFinder
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAAC	TTGGCAGCGTCCTCCGCCGGGCCAGACACCCCGTCTTC
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAACG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012159.1\|WP_050430733.1\|3527810_3528725_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|235737
NZ_CP012159.1\|WP_050430736.1\|3531239_3532175_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NZ_CP012159.1\|WP_050435875.1\|3530409_3530970_-\|transferase	unknown	unknown	gnl\|CDD\|100047
NZ_CP012159.1\|WP_050430732.1\|3527430_3527793_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050430734.1\|3528800_3529703_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176161
NZ_CP012159.1\|WP_156338541.1\|3522593_3523850_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225921
NZ_CP012159.1\|WP_050430731.1\|3525223_3526711_+\|C39-family-peptidase	unknown	unknown	gnl\|CDD\|366659
NZ_CP012159.1\|WP_050430724.1\|3512686_3513457_+\|CRISPR-associated-protein-Cas5	cas5	cd09693_cas5_CAS-I	gnl\|CDD\|273860
NZ_CP012159.1\|WP_156338542.1\|3524645_3525188_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050430722.1\|3510006_3511590_+\|hypothetical-protein	cas8b2	cls000029_cas8b2_CAS-I-B	unknown
NZ_CP012159.1\|WP_082362445.1\|3516227_3517502_+\|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|376633
NZ_CP012159.1\|WP_156338543.1\|3526815_3527169_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050430723.1\|3511586_3512687_+\|DevR-family-CRISPR-associated-autoregulator	cas7	cd09687_cas7_CAS-I-B	gnl\|CDD\|274215
NZ_CP012159.1\|WP_082362443.1\|3506990_3508325_+\|dicarboxylate/amino-acid:cation-symporter	unknown	unknown	gnl\|CDD\|366058
NZ_CP012159.1\|WP_050430727.1\|3517885_3518482_+\|CRISPR-associated-protein-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	gnl\|CDD\|273040
NZ_CP012159.1\|WP_169796527.1\|3508332_3509019_-\|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	cas6	mkCas0066_cas6_CAS-I:CAS-III	gnl\|CDD\|337605
NZ_CP012159.1\|WP_169796528.1\|3517529_3517889_+\|CRISPR-associated-endonuclease-Cas2	cas2	pfam09827_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|378256
NZ_CP012159.1\|WP_156338540.1\|3518943_3519111_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050430735.1\|3529764_3530313_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|206648
NZ_CP012159.1\|WP_050430725.1\|3513453_3515958_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124

Protein	Function_ID	Function_description	E-value
NZ_CP012159.1\|WP_050430733.1\|3527810_3528725_-\|SDR-family-oxidoreductase	gnl\|CDD\|235737	PRK06197, PRK06197, short chain dehydrogenase; Provisional.	2.93422e-112
NZ_CP012159.1\|WP_050435875.1\|3530409_3530970_-\|transferase	gnl\|CDD\|100047	cd03357, LbH_MAT_GAT, Maltose O-acetyltransferase (MAT) and Galactoside O-acetyltransferase (GAT): MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates. MAT acetylates maltose and glucose exclusively at the C6 position of the nonreducing end glucosyl moiety. GAT specifically acetylates galactopyranosides. Furthermore, MAT shows higher affinity toward artificial substrates containing an alkyl or hydrophobic chain as well as a glucosyl unit. Active MAT and GAT are homotrimers, with each subunit consisting of an N-terminal alpha-helical region and a C-terminal left-handed parallel alpha-helix (LbH) subdomain with 6 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X).	5.97828e-64
NZ_CP012159.1\|WP_050430734.1\|3528800_3529703_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176161	cd08472, PBP2_CrgA_like_3, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding fold. This CD represents the substrate binding domain of an uncharacterized LysR-type transcriptional regulator (LTTR) CrgA-like 3. The LTTRs are acting as both auto-repressors and activators of target promoters, controlling operons involved in a wide variety of cellular processes such as amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to name a few. In contrast to the tetrameric form of other LTTRs, CrgA from Neisseria meningitides assembles into an octameric ring, which can bind up to four 63-bp DNA oligonucleotides. Phylogenetic cluster analysis showed that the CrgA-like regulators form a subclass of the LTTRs that function as octamers. The CrgA is an auto-repressor of its own gene and activates the expression of the mdaB gene which coding for an NADPH-quinone reductase and that its action is increased by MBL (alpha-methylene-gamma-butyrolactone), an inducer of NADPH-quinone oxidoreductase. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	3.71632e-72
NZ_CP012159.1\|WP_156338541.1\|3522593_3523850_-\|hypothetical-protein	gnl\|CDD\|225921	COG3386, COG3386, Gluconolactonase [Carbohydrate transport and metabolism].	6.44925e-06
NZ_CP012159.1\|WP_050430731.1\|3525223_3526711_+\|C39-family-peptidase	gnl\|CDD\|366659	pfam01471, PG_binding_1, Putative peptidoglycan binding domain. This domain is composed of three alpha helices. This domain is found at the N or C-terminus of a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. This family is found N-terminal to the catalytic domain of matrixins. The domain is found to bind peptidoglycan experimentally.	2.50554e-05
NZ_CP012159.1\|WP_050430724.1\|3512686_3513457_+\|CRISPR-associated-protein-Cas5	gnl\|CDD\|273860	TIGR01895, conserved_hypothetical_protein, CRISPR-associated protein Cas5, subtype I-B/TNEAP. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This family is represented by TM1800 from Thermotoga maritima. It is related to TIGR01868 (CRISPR-associated protein, CT1976 family).	3.91362e-20
NZ_CP012159.1\|WP_082362445.1\|3516227_3517502_+\|CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	5.11152e-65
NZ_CP012159.1\|WP_050430736.1\|3531239_3532175_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	7.04926e-27
NZ_CP012159.1\|WP_050430723.1\|3511586_3512687_+\|DevR-family-CRISPR-associated-autoregulator	gnl\|CDD\|274215	TIGR02585, conserved_protein, CRISPR-associated protein Cas7/Cst2/DevR, subtype I-B/TNEAP. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This clade is a member of the DevR family (TIGR01875) and includes the DevR protein of Myxococcus xanthus, a protein whose expression appears to be regulated through a number of means, including both location and autorepression; DevR mutants are incapable of fruiting body development.	1.19133e-41
NZ_CP012159.1\|WP_082362443.1\|3506990_3508325_+\|dicarboxylate/amino-acid:cation-symporter	gnl\|CDD\|366058	pfam00375, SDF, Sodium:dicarboxylate symporter family.	5.05025e-110
NZ_CP012159.1\|WP_050430727.1\|3517885_3518482_+\|CRISPR-associated-protein-Cas4	gnl\|CDD\|273040	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4. This model represents a family of proteins associated with CRISPR repeats in a wide set of prokaryotic genomes. This scope of this model has been broadened since it was first built to describe an archaeal subset only. The function of the protein is undefined. Distantly related proteins, excluded from this model, include ORFs from Mycobacteriophage D29 and Sulfolobus islandicus filamentous virus and a region of the Schizosaccharomyces pombe DNA replication helicase Dna2p.	3.67384e-33
NZ_CP012159.1\|WP_169796527.1\|3508332_3509019_-\|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	gnl\|CDD\|337605	pfam10040, CRISPR_Cas6, CRISPR-associated endoribonuclease Cas6. Cas6 is a member of the RAMP (repeat-associated mysterious protein) superfamily. It is among the most widely distributed Cas proteins and is found in both bacteria and archaea. Cas6 functions in the generation of CRISPR-derived guide RNAs for invader defense in prokaryotes.	9.9471e-09
NZ_CP012159.1\|WP_169796528.1\|3517529_3517889_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|378256	pfam09827, CRISPR_Cas2, CRISPR associated protein Cas2. Members of this family of bacterial proteins comprise various hypothetical proteins, as well as CRISPR (clustered regularly interspaced short palindromic repeats) associated proteins, conferring resistance to infection by certain bacteriophages.	3.98851e-13
NZ_CP012159.1\|WP_050430735.1\|3529764_3530313_+\|hypothetical-protein	gnl\|CDD\|206648	cd00882, Ras_like_GTPase, Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases). Ras-like GTPase superfamily. The Ras-like superfamily of small GTPases consists of several families with an extremely high degree of structural and functional similarity. The Ras superfamily is divided into at least four families in eukaryotes: the Ras, Rho, Rab, and Sar1/Arf families. This superfamily also includes proteins like the GTP translation factors, Era-like GTPases, and G-alpha chain of the heterotrimeric G proteins. Members of the Ras superfamily regulate a wide variety of cellular functions: the Ras family regulates gene expression, the Rho family regulates cytoskeletal reorganization and gene expression, the Rab and Sar1/Arf families regulate vesicle trafficking, and the Ran family regulates nucleocytoplasmic transport and microtubule organization. The GTP translation factor family regulates initiation, elongation, termination, and release in translation, and the Era-like GTPase family regulates cell division, sporulation, and DNA replication. Members of the Ras superfamily are identified by the GTP binding site, which is made up of five characteristic sequence motifs, and the switch I and switch II regions.	0.00171213
NZ_CP012159.1\|WP_050430725.1\|3513453_3515958_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	2.09878e-63

>NZ_CP012159.1|WP_156338540.1|3518943_3519111_+|hypothetical-protein
MEGRTVIVEERSSIAEERSSIAEGRSVIVEGRLSIDGRTIVDRGRTIVDRWKDDQ
>NZ_CP012159.1|WP_050430727.1|3517885_3518482_+|CRISPR-associated-protein-Cas4
MISLRVSELRQYSFCPRVVWYRQVLGQPGRETGKMAQGRDAEAALQKLEVRRRLHRYGLEEASRRFDVPLQSEVHGLHGICDLVLELPGASPEAPRRAYPVEVKTTRGGVGRHHVVQLAAYALMLEASGVSPVERGYVLLLPADRVVEVPLGERERALVLRTAEAIRTMISCQRFPRATRYESFCPDCEFVNFCGDVL
>NZ_CP012159.1|WP_169796528.1|3517529_3517889_+|CRISPR-associated-endonuclease-Cas2
MNDRPRKPWKAERPGAALGRSEPGPAHLLAIFDVSDDRARRKLTELCKDYGLTRFQWSAFEGQLTRNRREELFDRGKRLLDDAVGGGRFFIVGIGAREQAESLRLDTPGRPAPAPKEGP
>NZ_CP012159.1|WP_082362445.1|3516227_3517502_+|CRISPR-associated-endonuclease-Cas1
MARTVLVEGYGVSVGKRSERLVVRRRPPREDATGNTEGAANVPPPLASPPTASLLPASPLPAARRTPATTRPTEEEIPFFQIGEIVLPARGVSVSVEMLAEAAERGISVSFLASSGKPYALLTSPMLTATVSTRREQLRALDDARGAEVCRRIVAGKIRNQAGLLTYFARSLAEAPADAQGPTSSQPSSLTDVQGPTSSQPSLLTDAQGPTFSQPGAPATTRLDRIHRAAASLREARREAMRVQGASAAAVRDTLMGLEGAAARVYWEGVAALCEGHIRFEGRRREGDIGPLNALLNYGYGILYARVWAVALHAGLDLFAGFLHTDRPGKPSLVLDLVEELRAPIVDRAVLAYVRLGRRVRFDGNWLDDATRRALGAVVLERLETPVPYAGRKLRLSSVIQAQARSLAMFLRRESRYRPFTMYW
>NZ_CP012159.1|WP_050430725.1|3513453_3515958_+|CRISPR-associated-helicase/endonuclease-Cas3
MKDPLAHVWAKSVPPSAPSAGTSSPRPNLRRGEPLKGHTENLLTRLAAWRDRFPDLPRFTDRADLWDLAAWSCLLHDVGKIARAFQRMLQGGARFHHRHEVLSLVAVGWLDLPDADRALIAAAVATHHRDVTAIFALYPGPTSPDLADLLSELDPDDEPRLRSWLTPGAGGPDPTRCGFAALPPLRPLSPFDAIDASLSALQQLADDIALRDATSPTSLTVRALRGLVQLADHAASAHQHFGRAPTLDSPAALLAQLQRSARTTPRPAGASPSPGSPSEPPSPAAALPEPPTPPSTPPEASLTDQPTFDLHPHQRTAAATLGHAHLIAPTGSGKTEAALLWATAQRQALAPAAPPIFYVLPYRASLNAMHTRIHERVGVDRDAVVLQHATATAALYGYLLEHKGYTPDHAARVAARERDLGRLMTAPVRVLSPYQLLRGCFSLRGHEALLTDAAGGLFLLDELHAYALDRLAFLLAALQHLACDLGARLFAMSATFPRVLRDALDDLLSTPACAAPFRSIVAAPETFDAFRRHHLHLDDRDLADDATLDTIARTVTAGQAVLVVATTVRRAQTLYTRLRDRLDPGASDPDRVTLLHSRFTARDRATKERALAARLGTRTRAKDTPGLVVVGTQVVEVSLDVDFDRLHTDPAPIEALVQRFGRINRGRRHRHCDVVVHRPSPPSSQFVYEPRLVDRALDILGPHSGEPIDERHVQTWVDAAYAPDADRWRKELDQRIRDARRDVLRVNRPLDSHEELRASFDAFFDGAEVIPEALRAEHQRLLVERPLEAATLAVPIHPGTYHSLSRKGLLRTQDRVTYARVPYDATSGLDLGAS
>NZ_CP012159.1|WP_050430724.1|3512686_3513457_+|CRISPR-associated-protein-Cas5
MRLARVTLHAPVASFRHPFFVTGRQPTFDIPPPSTLHGLCAAAAGTFPDPTTFLFGVHFTYRARAQDLEHQHLASALPPGTRITVPTPTGSQRATTEISVQPVLRDFLFDTTLTLYVAPDLASAFHAPVYPLVLGRSQDLAEVLAIDLVTLERADRLRLDHTLLPFALRPAVRFGTTVLLTRHITEAPERKATFSQYIVLHEPVFLGPDANPERRLLHVDGLSLDDLWTDPAHLDDDGFARGVWIHHLQPPTPPTP
>NZ_CP012159.1|WP_050430723.1|3511586_3512687_+|DevR-family-CRISPR-associated-autoregulator
MSHVTGSLIIDAPASALNNAGKDEEARTDNAVAVKFIRAPEGRYPYVSAQAVRYWLRTQLAASPGWSASPVFRETKVAYTDAEPTLYDEDDLFGYMRATSKSTDEKKAAKRAEIAARSTPVDPEVGEVTRISPLRIGTLVAITPTARLPRDFGTMARAEGDPVPHEHQFYRAHLKAPFALDLTAAGTFFVSQRVGYKNLDKNRIDSAKKAGATALQVRGFSAHRLPLPLRRRRVAQVFRTLGRLEGGAKQTLHLTDTAPAALILAVTRSGNQPFQRVFSPDPLGERTTFRADVLEEALRVYRDDFLSGVYIGWSRGFLDSERQKLDTFLASAASHHGIALHVGHPREMADAFAAALESDAAAPWFD
>NZ_CP012159.1|WP_050430722.1|3510006_3511590_+|hypothetical-protein
MKPLHWTGHALIDVGIAGLCAFAGRERPEDLTDDDLDAATDLMASEYYSGRLATFLTCVFMNASFVQPKETPAKREAFIRQYLRAHRAAPDPRVSGLACVFSGRAATVPLVRTHFPLFSGEDVLNFRPEGQTFLPAAGPFVVALFFLPLASRRSEGRLLAVHADDPALTIRFAAQYLEDNRRLLTLALPTERALVHAGYDREQPMWDATKKQYKFADAKGPRSLVVHDLSKLAQAVSSGFRRDRPPTGLSAYLLSNSGQGPSLDIVHIPSAAVGFIVKAAGASTASAWKALTERYLSVRSTDDTGETNSSRARGKKTPSIPGRAGWTRNLAFEDLCAIFDAGFTDHRAAAFWLRRHVLGQLQTRESNEASTDASTSRPHADLHGIRYDKDARSRSWALAELFLKEIMGMKKERLEIIRAFADKLADRIQTKNEVSLRRAVFFEDAWGLRRRLVIEQRKSYEEKGPLLFGLDEFAAVWLSTENDDRLVRDLIAIRVIERLHDLGVDAEAVLSTEPNDGESSSTEEFAS
>NZ_CP012159.1|WP_169796527.1|3508332_3509019_-|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6
MSAGVDRREGAASLVLDAHVVGRAHAEAPLLLATLRGMGDAGLGARRTRMSLVSVEALDGRGLPCGTALDPVGGRLSAVAPGVRARELVRPGDETARVVRVRYVSPTWLKEGGEVVREPRFGALMRRLRARLGALATVFGEREVDEDPRAMAAAADAVAMIHQAVTWYGQARRSTRTGQTHPLEGFVGEAVYQGELGRFLPMLRLGELLHVGKHATFGLGRIEVEVLG
>NZ_CP012159.1|WP_082362443.1|3506990_3508325_+|dicarboxylate/amino-acid:cation-symporter
MSPQQKMLLGIGTGAAAGLAANALAAGAPWLTWVIDHITFPVGQIFLRLLFMLVIPMLFSALVMGISELDLRHLGRLGARSFGYTIVISTVAVLIGLGLVNFIRPGAGLPESLRAMAQGSVVEAAAAPADTSPVALIIAMFPDNPIKAAASGDMLAVIVFSLFFGVGLSLARTPATAHLRESIQGLYDVVTRLLDAVIALAPIGVAALLFTMTSRMGVAILVQLSAYVGTVLLGLGLHMFGVYSLSVRFFGGMSPIAFFRGSRTAILTAFSTSSSSATLPTALRVAEEDLGLPPHVSRFVLTAGAAMNQNGTALFEGVTVLFLAQLYGVDLALGQQAIVMVICVLGGIGTAGMPGGSLPVVAMILGMFGIPPEGLGLILGVDRFLDMCRTTLNVTGDLAAAVYVSRGEPHDPGDHDGQGGAGGAGGEGATAGQGITEGLAGEGV
>NZ_CP012159.1|WP_156338541.1|3522593_3523850_-|hypothetical-protein
MVLFTLAMTACNPTCTANPSSQKSDETTIAAYIATAGGITVIERGAVSEPADLTGYITAMVLTPDGTLYTNGSESRRVRDGRVTELPKRFDDVALAPDGKVWMVTSTDVTLLDGDAISTIATPERPRAMAIPNDGAIFLIAGNDLYRRDGHAWTKDDALKRLVGPNEALKGLAAGPGGELYLVTPTAVYRRDPTGLWRALSLGAHPEVFTFGQVSSKGHLPLAMRTGLHLIDATGAVRKLDIPVEPTRVNAIAIDDADRLWLGAVTGLHIVSLDGKPLQHWPAGTLPGRATRIAVHRQGPPLPASPPAPILGSARGTVLVDGQPLAHAKVELCTDSAHGDTQCGRASGPLYAMTDAAGAFTLNQVPRDTYSFFAYERDGKRAFAPSSWIITASEKSRRPCCNTLTAGDTWDLGTIKIP
>NZ_CP012159.1|WP_156338542.1|3524645_3525188_+|hypothetical-protein
MLRLGSSFDVDVQLPWVADALSDPDPRTPSARADRLVARAMAYLQHVRGPGGAYVARARVQVLDGLPDLLRNPPPAGPALEAFTRSWLRDLYPRKYALAGDPAMHALVALGRAAAASYGLTTGHGGALVTLLAFVHGSGFADDPQASWATSILADDSRSEAHRVAHLHEAALGFLDAWMT
>NZ_CP012159.1|WP_050430731.1|3525223_3526711_+|C39-family-peptidase
MAGTDTDTDLDTATDTDANPDAANRAASDYEATNGCPCDYTVEVKVVTRAGEIPIQGAQVKLDGALLGNTNAEGEAGSSGQREEHSVQIEAAYVNAAENLKRETFQLRIDGIDALAGSYNLGESSNVILKIRDVLGTGTAALSGDADFEDRYPTEPDSVTFDAATRRFTVLVKMATLSLSVPYRNQNDGSETLVGVNATFSGDLLCMPTSTQMLFSYWGVQNAEGDSIDRNAVMQGTYDASSNKTTVFPTPWQRWDELRAWSRTVVSDPLSVGASVPNGRDNANVPSATANGMRDRLVLGEPFIVSIEGGHIMCIRGAVVDHADEVQWLISNDPYGNLNGVDSVYGGVDIGESVGAGGVNDPGDVSAVQDVLRSLGHYNGPVHGEVDDATIAAIRSFQNGGDGRVDPGGGTERRLNQTLGGRDNPWYSRDENEINTASGDGSARGKHVYYNGETESKPRRLRLNASSRLMILNRSPSLTREEVATRLTEGVVPRE
>NZ_CP012159.1|WP_156338543.1|3526815_3527169_-|hypothetical-protein
MSGVIVLGDNADWIVAGWVYDNVLAYIAEELEPSRRELAQLLLNSRTGVALGYCDLSGLDAGQFQSLAQAAARALSAVKKRGPSAFHYPSFYPGFVDRFEELRRLLEGDARLTTRPR
>NZ_CP012159.1|WP_050430732.1|3527430_3527793_-|hypothetical-protein
MHKYLLHAAYGWLTLTGVMHFVIDVVSQHLRGKHVPGTETTLYYGVHSAFALGQTVFGLLGLWLTFRARDVLSELPVVLLSLIATVGWLAVAVLFMEYWQPRFNAVFFGLLIVAGALTRP
>NZ_CP012159.1|WP_050430733.1|3527810_3528725_-|SDR-family-oxidoreductase
MTKWTTSSMPSQKGRSAVITGTGGLGLEDALELARAGGEVIIAGRNQQKGADAVAKVQAAIPAANVRFEQVDLASLASIIDFATRLKAQRKSLDLLINNAAVMTPPNRQETSDGFELQLGTNHLGHFALTAHLLPLLRNGQSARVVTLSSVAARDGALDFDDLQAQRGYQTMRAYSQSKLACLMFAIELHRRSEANRWGVTSIAAHPGISRTDLLHNAPGRWSGAGMARTFLWFLFQPASQGALPTLFAATSPEARAGAYYGPDKMNEMRGSPALAKVPPQAQDRAAAERLWRVSEQLTSVTFE
>NZ_CP012159.1|WP_050430734.1|3528800_3529703_+|LysR-family-transcriptional-regulator
MSLDLDALKVFVRVAELRSFTQAAQQLGMPKARASSHVQKLEAELGTELLQRSTRVVRATPEGEQLLKRAPGLLAEAEEIATLFRAGRALRGRVRVELPVRVACEYVIPRLPELLARHPQLQVEICASDRIVAALREGRDLVLRVGPVGEPGLVGRRIGEVPMMNCVSPSYLRQHGMPRTLEDLREHLIVHYATDAVPSFEYFDGKAYTELPMRSAVTVDNIEAYVAACVAGLGIVQVPRAEQEQLANKLVEVLPEFTARPVPISLLHTHGRAVPRRVRAVMTWLLEVLQPMVGEFVTSP
>NZ_CP012159.1|WP_050430735.1|3529764_3530313_+|hypothetical-protein
MKSKRIVYVGPGLSGRTTSILSLFNQSGQDERRYFDLYDEGCPLTLPSGETIIPRVSGGRPTLYRGADGRPRANRMGLDLEWLCEADGIVFVIDSQRLRQEANVFEFDLLKQDLLYQGQDVEKKPPIFQVNKRDLTMCDLMSLDELRSAFPTQHDVLVESKAREGVGTMEAVLALLQRMRGA
>NZ_CP012159.1|WP_050435875.1|3530409_3530970_-|transferase
MHRTLDRTPQIIEIGSRESEVMFTNIRRAMRMTAQMNQLTFDDADEIRRLFSELTGREVDPTFSLIPPFYTDHGVNIRVGKRVFINQCCHLMDIGSIDIADDVMIGPKVNLSTSSHPVDPAARRTRVVAKPIVIETNVWISTAATILAGVTLGENAVVAAGAVVTHDVPPNSLVAGVPARVIRQLA
>NZ_CP012159.1|WP_050430736.1|3531239_3532175_+|LysR-family-transcriptional-regulator
MDLDAVRTFVAVVEAGQFHAAAATLAVTQQAVSKRIATLETTLGVRLFARTPRGTQLTREGHVFLPHARELLAAEARALNSVRLDRRPLRVDVLSSRIGPAHVMREFHGAHPEIGISVVTHLFDVESALAALRSGAIDATFRAVTRPEEQLGGDIAAIRVLDDPVELLTGHAHELAGAASVTPAALAAHEVWMPSNVPGAEWSSYYEALSARFGLTIDTVGPNFGIEALLEAIAGSSTLATFVGEHIRLVWPSEYDLRRIPVRDPMLVYPHSMLFRIDDPHPGLAMLRRYLRSRKEHYRRPRAWTPSWAVH

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Crispr_ID: NZ_CP012159_15

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012159_15

3520205-3521882

Unclear

Consensus_repeat	Method
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAAC	PILER-CR
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAAC	CRISPRCasFinder
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAAC	CRT

22 spacers

cas4,cas2,cas1,cas3,cas5,cas7,cas8b2,cas6

The CRISPR arrays of NZ_CP012159_15

>merge|NZ_CP012159|15|3520205-3521882|PILER-CR,CRISPRCasFinder,CRT
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAACTGAAAAACCGTTTCCGGAAGGGTGGAATCGGTGTCTCCTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAACGGATCCCGAGCGACTGGAGGAAGACGTCGGTGTCCCACTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAACCCACAGGTTGTACGACGTGTACAAGGGACGGGTCGAGTGCTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAACGAGTAGTCCTCCGCCGCATGGAACCCGTTGGCTTCACGCTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAACAACTCTGCGTATACAGCCTCGCACACTCGCTGCATCCTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAACATCAGATAATGCTGCTGGCCAACGTGACCGCGATAGCCTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAACCAGTCGATCGGATCGTTCGATGACGAGGGCGACGACTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAACGGCGGCAGGCGGATATTTCGCGCTCCTGGAGCCAGGCTCTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAACGAGACGGAGCTTGCCCGGGCGACGGCGCGGCGTCTCACTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAACAGGGCATGGAGGCTGGCGTCGAGGCAGGGAGCGGCGGCGTCTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAACCCGACGAGCACAGGGAGGTGGCGGGCACGCTATTGGGTCTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAACCTGTTCGACCTGCGTCCACAGCGAGCCAGTCGTTGACCTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAACTGGCCCTCGCGTCCTGTGGAGCCGGCGCGGCCCGTACCCTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAACAGCGCGACCGTCACCGCGCTGTCTTCTAGCAGCTCGGCTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAACTACCTTATGCGCTTCGCACACTTTAATAGCTCCGGCTAGCTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAACGCAGCCGTAGCCGCTCTCCAGGCGAGCGATTGCCAGGACTTGTAGCCGACTCCCCGCAGACGAGGGGATTGAAACGGCAAGTAACCCTCGCGTCAGATCCGGCCCTCGCGACGACTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAACACCAGATCAAGTCGTAGATCGCCCCACCCGGGGCGAGCTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAACGCCGAGCTTCAGTCGGTCTCGAGCCGCACCACCCGACCACTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAACACCACGAGCGGGGCCGTCTTCATCACCCTCCCCACGACTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAACTCGATGGCATCCACATCCATCGGAGGGGCATCATCCGCTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAACGCCATCACGAAGCCTCTGCTTTCGCACCTGAGAAAGCTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAACAT

>NZ_CP012159|15|1|3520205-3521808|PILER-CR
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAAC	TGAAAAACCGTTTCCGGAAGGGTGGAATCGGTGTCTC
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAAC	GGATCCCGAGCGACTGGAGGAAGACGTCGGTGTCCCA
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAAC	CCACAGGTTGTACGACGTGTACAAGGGACGGGTCGAGTG
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAAC	GAGTAGTCCTCCGCCGCATGGAACCCGTTGGCTTCACG
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAAC	AACTCTGCGTATACAGCCTCGCACACTCGCTGCATC
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAAC	ATCAGATAATGCTGCTGGCCAACGTGACCGCGATAGC
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAAC	CAGTCGATCGGATCGTTCGATGACGAGGGCGACGA
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAAC	GGCGGCAGGCGGATATTTCGCGCTCCTGGAGCCAGGCT
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAAC	GAGACGGAGCTTGCCCGGGCGACGGCGCGGCGTCTCA
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAAC	AGGGCATGGAGGCTGGCGTCGAGGCAGGGAGCGGCGGCGT
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAAC	CCGACGAGCACAGGGAGGTGGCGGGCACGCTATTGGGT
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAAC	CTGTTCGACCTGCGTCCACAGCGAGCCAGTCGTTGAC
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAAC	TGGCCCTCGCGTCCTGTGGAGCCGGCGCGGCCCGTACC
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAAC	AGCGCGACCGTCACCGCGCTGTCTTCTAGCAGCTCGG
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAAC	TACCTTATGCGCTTCGCACACTTTAATAGCTCCGGCTAG
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAAC	GCAGCCGTAGCCGCTCTCCAGGCGAGCGATTGCCAGGA
CTTGTAGCCGACTCCCCGCAGACGAGGGGATTGAAAC	GGCAAGTAACCCTCGCGTCAGATCCGGCCCTCGCGACGA
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAAC	ACCAGATCAAGTCGTAGATCGCCCCACCCGGGGCGAG
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAAC	GCCGAGCTTCAGTCGGTCTCGAGCCGCACCACCCGACCA
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAAC	ACCACGAGCGGGGCCGTCTTCATCACCCTCCCCACGA
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAAC	TCGATGGCATCCACATCCATCGGAGGGGCATCATCCG
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAAC

>NZ_CP012159|15|13|3520205-3521882|CRISPRCasFinder
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAAC	TGAAAAACCGTTTCCGGAAGGGTGGAATCGGTGTCTC
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAAC	GGATCCCGAGCGACTGGAGGAAGACGTCGGTGTCCCA
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAAC	CCACAGGTTGTACGACGTGTACAAGGGACGGGTCGAGTG
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAAC	GAGTAGTCCTCCGCCGCATGGAACCCGTTGGCTTCACG
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAAC	AACTCTGCGTATACAGCCTCGCACACTCGCTGCATC
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAAC	ATCAGATAATGCTGCTGGCCAACGTGACCGCGATAGC
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAAC	CAGTCGATCGGATCGTTCGATGACGAGGGCGACGA
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAAC	GGCGGCAGGCGGATATTTCGCGCTCCTGGAGCCAGGCT
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAAC	GAGACGGAGCTTGCCCGGGCGACGGCGCGGCGTCTCA
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAAC	AGGGCATGGAGGCTGGCGTCGAGGCAGGGAGCGGCGGCGT
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAAC	CCGACGAGCACAGGGAGGTGGCGGGCACGCTATTGGGT
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAAC	CTGTTCGACCTGCGTCCACAGCGAGCCAGTCGTTGAC
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAAC	TGGCCCTCGCGTCCTGTGGAGCCGGCGCGGCCCGTACC
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAAC	AGCGCGACCGTCACCGCGCTGTCTTCTAGCAGCTCGG
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAAC	TACCTTATGCGCTTCGCACACTTTAATAGCTCCGGCTAG
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAAC	GCAGCCGTAGCCGCTCTCCAGGCGAGCGATTGCCAGGA
CTTGTAGCCGACTCCCCGCAGACGAGGGGATTGAAAC	GGCAAGTAACCCTCGCGTCAGATCCGGCCCTCGCGACGA
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAAC	ACCAGATCAAGTCGTAGATCGCCCCACCCGGGGCGAG
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAAC	GCCGAGCTTCAGTCGGTCTCGAGCCGCACCACCCGACCA
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAAC	ACCACGAGCGGGGCCGTCTTCATCACCCTCCCCACGA
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAAC	TCGATGGCATCCACATCCATCGGAGGGGCATCATCCG
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAAC	GCCATCACGAAGCCTCTGCTTTCGCACCTGAGAAAG
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAACAT

>NZ_CP012159|15|3|3520205-3521881|CRT
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAAC	TGAAAAACCGTTTCCGGAAGGGTGGAATCGGTGTCTC
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAAC	GGATCCCGAGCGACTGGAGGAAGACGTCGGTGTCCCA
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAAC	CCACAGGTTGTACGACGTGTACAAGGGACGGGTCGAGTG
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAAC	GAGTAGTCCTCCGCCGCATGGAACCCGTTGGCTTCACG
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAAC	AACTCTGCGTATACAGCCTCGCACACTCGCTGCATC
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAAC	ATCAGATAATGCTGCTGGCCAACGTGACCGCGATAGC
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAAC	CAGTCGATCGGATCGTTCGATGACGAGGGCGACGA
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAAC	GGCGGCAGGCGGATATTTCGCGCTCCTGGAGCCAGGCT
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAAC	GAGACGGAGCTTGCCCGGGCGACGGCGCGGCGTCTCA
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAAC	AGGGCATGGAGGCTGGCGTCGAGGCAGGGAGCGGCGGCGT
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAAC	CCGACGAGCACAGGGAGGTGGCGGGCACGCTATTGGGT
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAAC	CTGTTCGACCTGCGTCCACAGCGAGCCAGTCGTTGAC
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAAC	TGGCCCTCGCGTCCTGTGGAGCCGGCGCGGCCCGTACC
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAAC	AGCGCGACCGTCACCGCGCTGTCTTCTAGCAGCTCGG
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAAC	TACCTTATGCGCTTCGCACACTTTAATAGCTCCGGCTAG
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAAC	GCAGCCGTAGCCGCTCTCCAGGCGAGCGATTGCCAGGA
CTTGTAGCCGACTCCCCGCAGACGAGGGGATTGAAAC	GGCAAGTAACCCTCGCGTCAGATCCGGCCCTCGCGACGA
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAAC	ACCAGATCAAGTCGTAGATCGCCCCACCCGGGGCGAG
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAAC	GCCGAGCTTCAGTCGGTCTCGAGCCGCACCACCCGACCA
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAAC	ACCACGAGCGGGGCCGTCTTCATCACCCTCCCCACGA
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAAC	TCGATGGCATCCACATCCATCGGAGGGGCATCATCCG
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAAAC	GCCATCACGAAGCCTCTGCTTTCGCACCTGAGAAAG
CTTGCAGCCGACTCCCCGCAGACGAGGGGATTGAACA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012159.1\|WP_050430733.1\|3527810_3528725_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|235737
NZ_CP012159.1\|WP_050430736.1\|3531239_3532175_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NZ_CP012159.1\|WP_050435875.1\|3530409_3530970_-\|transferase	unknown	unknown	gnl\|CDD\|100047
NZ_CP012159.1\|WP_050430732.1\|3527430_3527793_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050430734.1\|3528800_3529703_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176161
NZ_CP012159.1\|WP_156338541.1\|3522593_3523850_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225921
NZ_CP012159.1\|WP_050430731.1\|3525223_3526711_+\|C39-family-peptidase	unknown	unknown	gnl\|CDD\|366659
NZ_CP012159.1\|WP_050430724.1\|3512686_3513457_+\|CRISPR-associated-protein-Cas5	cas5	cd09693_cas5_CAS-I	gnl\|CDD\|273860
NZ_CP012159.1\|WP_156338542.1\|3524645_3525188_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050430722.1\|3510006_3511590_+\|hypothetical-protein	cas8b2	cls000029_cas8b2_CAS-I-B	unknown
NZ_CP012159.1\|WP_082362445.1\|3516227_3517502_+\|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|376633
NZ_CP012159.1\|WP_156338543.1\|3526815_3527169_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050430723.1\|3511586_3512687_+\|DevR-family-CRISPR-associated-autoregulator	cas7	cd09687_cas7_CAS-I-B	gnl\|CDD\|274215
NZ_CP012159.1\|WP_082362443.1\|3506990_3508325_+\|dicarboxylate/amino-acid:cation-symporter	unknown	unknown	gnl\|CDD\|366058
NZ_CP012159.1\|WP_050430727.1\|3517885_3518482_+\|CRISPR-associated-protein-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	gnl\|CDD\|273040
NZ_CP012159.1\|WP_169796527.1\|3508332_3509019_-\|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	cas6	mkCas0066_cas6_CAS-I:CAS-III	gnl\|CDD\|337605
NZ_CP012159.1\|WP_169796528.1\|3517529_3517889_+\|CRISPR-associated-endonuclease-Cas2	cas2	pfam09827_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|378256
NZ_CP012159.1\|WP_156338540.1\|3518943_3519111_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050430735.1\|3529764_3530313_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|206648
NZ_CP012159.1\|WP_050430725.1\|3513453_3515958_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124

Protein	Function_ID	Function_description	E-value
NZ_CP012159.1\|WP_050430733.1\|3527810_3528725_-\|SDR-family-oxidoreductase	gnl\|CDD\|235737	PRK06197, PRK06197, short chain dehydrogenase; Provisional.	2.93422e-112
NZ_CP012159.1\|WP_050435875.1\|3530409_3530970_-\|transferase	gnl\|CDD\|100047	cd03357, LbH_MAT_GAT, Maltose O-acetyltransferase (MAT) and Galactoside O-acetyltransferase (GAT): MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates. MAT acetylates maltose and glucose exclusively at the C6 position of the nonreducing end glucosyl moiety. GAT specifically acetylates galactopyranosides. Furthermore, MAT shows higher affinity toward artificial substrates containing an alkyl or hydrophobic chain as well as a glucosyl unit. Active MAT and GAT are homotrimers, with each subunit consisting of an N-terminal alpha-helical region and a C-terminal left-handed parallel alpha-helix (LbH) subdomain with 6 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X).	5.97828e-64
NZ_CP012159.1\|WP_050430734.1\|3528800_3529703_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176161	cd08472, PBP2_CrgA_like_3, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding fold. This CD represents the substrate binding domain of an uncharacterized LysR-type transcriptional regulator (LTTR) CrgA-like 3. The LTTRs are acting as both auto-repressors and activators of target promoters, controlling operons involved in a wide variety of cellular processes such as amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to name a few. In contrast to the tetrameric form of other LTTRs, CrgA from Neisseria meningitides assembles into an octameric ring, which can bind up to four 63-bp DNA oligonucleotides. Phylogenetic cluster analysis showed that the CrgA-like regulators form a subclass of the LTTRs that function as octamers. The CrgA is an auto-repressor of its own gene and activates the expression of the mdaB gene which coding for an NADPH-quinone reductase and that its action is increased by MBL (alpha-methylene-gamma-butyrolactone), an inducer of NADPH-quinone oxidoreductase. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	3.71632e-72
NZ_CP012159.1\|WP_156338541.1\|3522593_3523850_-\|hypothetical-protein	gnl\|CDD\|225921	COG3386, COG3386, Gluconolactonase [Carbohydrate transport and metabolism].	6.44925e-06
NZ_CP012159.1\|WP_050430731.1\|3525223_3526711_+\|C39-family-peptidase	gnl\|CDD\|366659	pfam01471, PG_binding_1, Putative peptidoglycan binding domain. This domain is composed of three alpha helices. This domain is found at the N or C-terminus of a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. This family is found N-terminal to the catalytic domain of matrixins. The domain is found to bind peptidoglycan experimentally.	2.50554e-05
NZ_CP012159.1\|WP_050430724.1\|3512686_3513457_+\|CRISPR-associated-protein-Cas5	gnl\|CDD\|273860	TIGR01895, conserved_hypothetical_protein, CRISPR-associated protein Cas5, subtype I-B/TNEAP. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This family is represented by TM1800 from Thermotoga maritima. It is related to TIGR01868 (CRISPR-associated protein, CT1976 family).	3.91362e-20
NZ_CP012159.1\|WP_082362445.1\|3516227_3517502_+\|CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	5.11152e-65
NZ_CP012159.1\|WP_050430736.1\|3531239_3532175_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	7.04926e-27
NZ_CP012159.1\|WP_050430723.1\|3511586_3512687_+\|DevR-family-CRISPR-associated-autoregulator	gnl\|CDD\|274215	TIGR02585, conserved_protein, CRISPR-associated protein Cas7/Cst2/DevR, subtype I-B/TNEAP. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This clade is a member of the DevR family (TIGR01875) and includes the DevR protein of Myxococcus xanthus, a protein whose expression appears to be regulated through a number of means, including both location and autorepression; DevR mutants are incapable of fruiting body development.	1.19133e-41
NZ_CP012159.1\|WP_082362443.1\|3506990_3508325_+\|dicarboxylate/amino-acid:cation-symporter	gnl\|CDD\|366058	pfam00375, SDF, Sodium:dicarboxylate symporter family.	5.05025e-110
NZ_CP012159.1\|WP_050430727.1\|3517885_3518482_+\|CRISPR-associated-protein-Cas4	gnl\|CDD\|273040	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4. This model represents a family of proteins associated with CRISPR repeats in a wide set of prokaryotic genomes. This scope of this model has been broadened since it was first built to describe an archaeal subset only. The function of the protein is undefined. Distantly related proteins, excluded from this model, include ORFs from Mycobacteriophage D29 and Sulfolobus islandicus filamentous virus and a region of the Schizosaccharomyces pombe DNA replication helicase Dna2p.	3.67384e-33
NZ_CP012159.1\|WP_169796527.1\|3508332_3509019_-\|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	gnl\|CDD\|337605	pfam10040, CRISPR_Cas6, CRISPR-associated endoribonuclease Cas6. Cas6 is a member of the RAMP (repeat-associated mysterious protein) superfamily. It is among the most widely distributed Cas proteins and is found in both bacteria and archaea. Cas6 functions in the generation of CRISPR-derived guide RNAs for invader defense in prokaryotes.	9.9471e-09
NZ_CP012159.1\|WP_169796528.1\|3517529_3517889_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|378256	pfam09827, CRISPR_Cas2, CRISPR associated protein Cas2. Members of this family of bacterial proteins comprise various hypothetical proteins, as well as CRISPR (clustered regularly interspaced short palindromic repeats) associated proteins, conferring resistance to infection by certain bacteriophages.	3.98851e-13
NZ_CP012159.1\|WP_050430735.1\|3529764_3530313_+\|hypothetical-protein	gnl\|CDD\|206648	cd00882, Ras_like_GTPase, Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases). Ras-like GTPase superfamily. The Ras-like superfamily of small GTPases consists of several families with an extremely high degree of structural and functional similarity. The Ras superfamily is divided into at least four families in eukaryotes: the Ras, Rho, Rab, and Sar1/Arf families. This superfamily also includes proteins like the GTP translation factors, Era-like GTPases, and G-alpha chain of the heterotrimeric G proteins. Members of the Ras superfamily regulate a wide variety of cellular functions: the Ras family regulates gene expression, the Rho family regulates cytoskeletal reorganization and gene expression, the Rab and Sar1/Arf families regulate vesicle trafficking, and the Ran family regulates nucleocytoplasmic transport and microtubule organization. The GTP translation factor family regulates initiation, elongation, termination, and release in translation, and the Era-like GTPase family regulates cell division, sporulation, and DNA replication. Members of the Ras superfamily are identified by the GTP binding site, which is made up of five characteristic sequence motifs, and the switch I and switch II regions.	0.00171213
NZ_CP012159.1\|WP_050430725.1\|3513453_3515958_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	2.09878e-63

>NZ_CP012159.1|WP_156338540.1|3518943_3519111_+|hypothetical-protein
MEGRTVIVEERSSIAEERSSIAEGRSVIVEGRLSIDGRTIVDRGRTIVDRWKDDQ
>NZ_CP012159.1|WP_050430727.1|3517885_3518482_+|CRISPR-associated-protein-Cas4
MISLRVSELRQYSFCPRVVWYRQVLGQPGRETGKMAQGRDAEAALQKLEVRRRLHRYGLEEASRRFDVPLQSEVHGLHGICDLVLELPGASPEAPRRAYPVEVKTTRGGVGRHHVVQLAAYALMLEASGVSPVERGYVLLLPADRVVEVPLGERERALVLRTAEAIRTMISCQRFPRATRYESFCPDCEFVNFCGDVL
>NZ_CP012159.1|WP_169796528.1|3517529_3517889_+|CRISPR-associated-endonuclease-Cas2
MNDRPRKPWKAERPGAALGRSEPGPAHLLAIFDVSDDRARRKLTELCKDYGLTRFQWSAFEGQLTRNRREELFDRGKRLLDDAVGGGRFFIVGIGAREQAESLRLDTPGRPAPAPKEGP
>NZ_CP012159.1|WP_082362445.1|3516227_3517502_+|CRISPR-associated-endonuclease-Cas1
MARTVLVEGYGVSVGKRSERLVVRRRPPREDATGNTEGAANVPPPLASPPTASLLPASPLPAARRTPATTRPTEEEIPFFQIGEIVLPARGVSVSVEMLAEAAERGISVSFLASSGKPYALLTSPMLTATVSTRREQLRALDDARGAEVCRRIVAGKIRNQAGLLTYFARSLAEAPADAQGPTSSQPSSLTDVQGPTSSQPSLLTDAQGPTFSQPGAPATTRLDRIHRAAASLREARREAMRVQGASAAAVRDTLMGLEGAAARVYWEGVAALCEGHIRFEGRRREGDIGPLNALLNYGYGILYARVWAVALHAGLDLFAGFLHTDRPGKPSLVLDLVEELRAPIVDRAVLAYVRLGRRVRFDGNWLDDATRRALGAVVLERLETPVPYAGRKLRLSSVIQAQARSLAMFLRRESRYRPFTMYW
>NZ_CP012159.1|WP_050430725.1|3513453_3515958_+|CRISPR-associated-helicase/endonuclease-Cas3
MKDPLAHVWAKSVPPSAPSAGTSSPRPNLRRGEPLKGHTENLLTRLAAWRDRFPDLPRFTDRADLWDLAAWSCLLHDVGKIARAFQRMLQGGARFHHRHEVLSLVAVGWLDLPDADRALIAAAVATHHRDVTAIFALYPGPTSPDLADLLSELDPDDEPRLRSWLTPGAGGPDPTRCGFAALPPLRPLSPFDAIDASLSALQQLADDIALRDATSPTSLTVRALRGLVQLADHAASAHQHFGRAPTLDSPAALLAQLQRSARTTPRPAGASPSPGSPSEPPSPAAALPEPPTPPSTPPEASLTDQPTFDLHPHQRTAAATLGHAHLIAPTGSGKTEAALLWATAQRQALAPAAPPIFYVLPYRASLNAMHTRIHERVGVDRDAVVLQHATATAALYGYLLEHKGYTPDHAARVAARERDLGRLMTAPVRVLSPYQLLRGCFSLRGHEALLTDAAGGLFLLDELHAYALDRLAFLLAALQHLACDLGARLFAMSATFPRVLRDALDDLLSTPACAAPFRSIVAAPETFDAFRRHHLHLDDRDLADDATLDTIARTVTAGQAVLVVATTVRRAQTLYTRLRDRLDPGASDPDRVTLLHSRFTARDRATKERALAARLGTRTRAKDTPGLVVVGTQVVEVSLDVDFDRLHTDPAPIEALVQRFGRINRGRRHRHCDVVVHRPSPPSSQFVYEPRLVDRALDILGPHSGEPIDERHVQTWVDAAYAPDADRWRKELDQRIRDARRDVLRVNRPLDSHEELRASFDAFFDGAEVIPEALRAEHQRLLVERPLEAATLAVPIHPGTYHSLSRKGLLRTQDRVTYARVPYDATSGLDLGAS
>NZ_CP012159.1|WP_050430724.1|3512686_3513457_+|CRISPR-associated-protein-Cas5
MRLARVTLHAPVASFRHPFFVTGRQPTFDIPPPSTLHGLCAAAAGTFPDPTTFLFGVHFTYRARAQDLEHQHLASALPPGTRITVPTPTGSQRATTEISVQPVLRDFLFDTTLTLYVAPDLASAFHAPVYPLVLGRSQDLAEVLAIDLVTLERADRLRLDHTLLPFALRPAVRFGTTVLLTRHITEAPERKATFSQYIVLHEPVFLGPDANPERRLLHVDGLSLDDLWTDPAHLDDDGFARGVWIHHLQPPTPPTP
>NZ_CP012159.1|WP_050430723.1|3511586_3512687_+|DevR-family-CRISPR-associated-autoregulator
MSHVTGSLIIDAPASALNNAGKDEEARTDNAVAVKFIRAPEGRYPYVSAQAVRYWLRTQLAASPGWSASPVFRETKVAYTDAEPTLYDEDDLFGYMRATSKSTDEKKAAKRAEIAARSTPVDPEVGEVTRISPLRIGTLVAITPTARLPRDFGTMARAEGDPVPHEHQFYRAHLKAPFALDLTAAGTFFVSQRVGYKNLDKNRIDSAKKAGATALQVRGFSAHRLPLPLRRRRVAQVFRTLGRLEGGAKQTLHLTDTAPAALILAVTRSGNQPFQRVFSPDPLGERTTFRADVLEEALRVYRDDFLSGVYIGWSRGFLDSERQKLDTFLASAASHHGIALHVGHPREMADAFAAALESDAAAPWFD
>NZ_CP012159.1|WP_050430722.1|3510006_3511590_+|hypothetical-protein
MKPLHWTGHALIDVGIAGLCAFAGRERPEDLTDDDLDAATDLMASEYYSGRLATFLTCVFMNASFVQPKETPAKREAFIRQYLRAHRAAPDPRVSGLACVFSGRAATVPLVRTHFPLFSGEDVLNFRPEGQTFLPAAGPFVVALFFLPLASRRSEGRLLAVHADDPALTIRFAAQYLEDNRRLLTLALPTERALVHAGYDREQPMWDATKKQYKFADAKGPRSLVVHDLSKLAQAVSSGFRRDRPPTGLSAYLLSNSGQGPSLDIVHIPSAAVGFIVKAAGASTASAWKALTERYLSVRSTDDTGETNSSRARGKKTPSIPGRAGWTRNLAFEDLCAIFDAGFTDHRAAAFWLRRHVLGQLQTRESNEASTDASTSRPHADLHGIRYDKDARSRSWALAELFLKEIMGMKKERLEIIRAFADKLADRIQTKNEVSLRRAVFFEDAWGLRRRLVIEQRKSYEEKGPLLFGLDEFAAVWLSTENDDRLVRDLIAIRVIERLHDLGVDAEAVLSTEPNDGESSSTEEFAS
>NZ_CP012159.1|WP_169796527.1|3508332_3509019_-|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6
MSAGVDRREGAASLVLDAHVVGRAHAEAPLLLATLRGMGDAGLGARRTRMSLVSVEALDGRGLPCGTALDPVGGRLSAVAPGVRARELVRPGDETARVVRVRYVSPTWLKEGGEVVREPRFGALMRRLRARLGALATVFGEREVDEDPRAMAAAADAVAMIHQAVTWYGQARRSTRTGQTHPLEGFVGEAVYQGELGRFLPMLRLGELLHVGKHATFGLGRIEVEVLG
>NZ_CP012159.1|WP_082362443.1|3506990_3508325_+|dicarboxylate/amino-acid:cation-symporter
MSPQQKMLLGIGTGAAAGLAANALAAGAPWLTWVIDHITFPVGQIFLRLLFMLVIPMLFSALVMGISELDLRHLGRLGARSFGYTIVISTVAVLIGLGLVNFIRPGAGLPESLRAMAQGSVVEAAAAPADTSPVALIIAMFPDNPIKAAASGDMLAVIVFSLFFGVGLSLARTPATAHLRESIQGLYDVVTRLLDAVIALAPIGVAALLFTMTSRMGVAILVQLSAYVGTVLLGLGLHMFGVYSLSVRFFGGMSPIAFFRGSRTAILTAFSTSSSSATLPTALRVAEEDLGLPPHVSRFVLTAGAAMNQNGTALFEGVTVLFLAQLYGVDLALGQQAIVMVICVLGGIGTAGMPGGSLPVVAMILGMFGIPPEGLGLILGVDRFLDMCRTTLNVTGDLAAAVYVSRGEPHDPGDHDGQGGAGGAGGEGATAGQGITEGLAGEGV
>NZ_CP012159.1|WP_156338541.1|3522593_3523850_-|hypothetical-protein
MVLFTLAMTACNPTCTANPSSQKSDETTIAAYIATAGGITVIERGAVSEPADLTGYITAMVLTPDGTLYTNGSESRRVRDGRVTELPKRFDDVALAPDGKVWMVTSTDVTLLDGDAISTIATPERPRAMAIPNDGAIFLIAGNDLYRRDGHAWTKDDALKRLVGPNEALKGLAAGPGGELYLVTPTAVYRRDPTGLWRALSLGAHPEVFTFGQVSSKGHLPLAMRTGLHLIDATGAVRKLDIPVEPTRVNAIAIDDADRLWLGAVTGLHIVSLDGKPLQHWPAGTLPGRATRIAVHRQGPPLPASPPAPILGSARGTVLVDGQPLAHAKVELCTDSAHGDTQCGRASGPLYAMTDAAGAFTLNQVPRDTYSFFAYERDGKRAFAPSSWIITASEKSRRPCCNTLTAGDTWDLGTIKIP
>NZ_CP012159.1|WP_156338542.1|3524645_3525188_+|hypothetical-protein
MLRLGSSFDVDVQLPWVADALSDPDPRTPSARADRLVARAMAYLQHVRGPGGAYVARARVQVLDGLPDLLRNPPPAGPALEAFTRSWLRDLYPRKYALAGDPAMHALVALGRAAAASYGLTTGHGGALVTLLAFVHGSGFADDPQASWATSILADDSRSEAHRVAHLHEAALGFLDAWMT
>NZ_CP012159.1|WP_050430731.1|3525223_3526711_+|C39-family-peptidase
MAGTDTDTDLDTATDTDANPDAANRAASDYEATNGCPCDYTVEVKVVTRAGEIPIQGAQVKLDGALLGNTNAEGEAGSSGQREEHSVQIEAAYVNAAENLKRETFQLRIDGIDALAGSYNLGESSNVILKIRDVLGTGTAALSGDADFEDRYPTEPDSVTFDAATRRFTVLVKMATLSLSVPYRNQNDGSETLVGVNATFSGDLLCMPTSTQMLFSYWGVQNAEGDSIDRNAVMQGTYDASSNKTTVFPTPWQRWDELRAWSRTVVSDPLSVGASVPNGRDNANVPSATANGMRDRLVLGEPFIVSIEGGHIMCIRGAVVDHADEVQWLISNDPYGNLNGVDSVYGGVDIGESVGAGGVNDPGDVSAVQDVLRSLGHYNGPVHGEVDDATIAAIRSFQNGGDGRVDPGGGTERRLNQTLGGRDNPWYSRDENEINTASGDGSARGKHVYYNGETESKPRRLRLNASSRLMILNRSPSLTREEVATRLTEGVVPRE
>NZ_CP012159.1|WP_156338543.1|3526815_3527169_-|hypothetical-protein
MSGVIVLGDNADWIVAGWVYDNVLAYIAEELEPSRRELAQLLLNSRTGVALGYCDLSGLDAGQFQSLAQAAARALSAVKKRGPSAFHYPSFYPGFVDRFEELRRLLEGDARLTTRPR
>NZ_CP012159.1|WP_050430732.1|3527430_3527793_-|hypothetical-protein
MHKYLLHAAYGWLTLTGVMHFVIDVVSQHLRGKHVPGTETTLYYGVHSAFALGQTVFGLLGLWLTFRARDVLSELPVVLLSLIATVGWLAVAVLFMEYWQPRFNAVFFGLLIVAGALTRP
>NZ_CP012159.1|WP_050430733.1|3527810_3528725_-|SDR-family-oxidoreductase
MTKWTTSSMPSQKGRSAVITGTGGLGLEDALELARAGGEVIIAGRNQQKGADAVAKVQAAIPAANVRFEQVDLASLASIIDFATRLKAQRKSLDLLINNAAVMTPPNRQETSDGFELQLGTNHLGHFALTAHLLPLLRNGQSARVVTLSSVAARDGALDFDDLQAQRGYQTMRAYSQSKLACLMFAIELHRRSEANRWGVTSIAAHPGISRTDLLHNAPGRWSGAGMARTFLWFLFQPASQGALPTLFAATSPEARAGAYYGPDKMNEMRGSPALAKVPPQAQDRAAAERLWRVSEQLTSVTFE
>NZ_CP012159.1|WP_050430734.1|3528800_3529703_+|LysR-family-transcriptional-regulator
MSLDLDALKVFVRVAELRSFTQAAQQLGMPKARASSHVQKLEAELGTELLQRSTRVVRATPEGEQLLKRAPGLLAEAEEIATLFRAGRALRGRVRVELPVRVACEYVIPRLPELLARHPQLQVEICASDRIVAALREGRDLVLRVGPVGEPGLVGRRIGEVPMMNCVSPSYLRQHGMPRTLEDLREHLIVHYATDAVPSFEYFDGKAYTELPMRSAVTVDNIEAYVAACVAGLGIVQVPRAEQEQLANKLVEVLPEFTARPVPISLLHTHGRAVPRRVRAVMTWLLEVLQPMVGEFVTSP
>NZ_CP012159.1|WP_050430735.1|3529764_3530313_+|hypothetical-protein
MKSKRIVYVGPGLSGRTTSILSLFNQSGQDERRYFDLYDEGCPLTLPSGETIIPRVSGGRPTLYRGADGRPRANRMGLDLEWLCEADGIVFVIDSQRLRQEANVFEFDLLKQDLLYQGQDVEKKPPIFQVNKRDLTMCDLMSLDELRSAFPTQHDVLVESKAREGVGTMEAVLALLQRMRGA
>NZ_CP012159.1|WP_050435875.1|3530409_3530970_-|transferase
MHRTLDRTPQIIEIGSRESEVMFTNIRRAMRMTAQMNQLTFDDADEIRRLFSELTGREVDPTFSLIPPFYTDHGVNIRVGKRVFINQCCHLMDIGSIDIADDVMIGPKVNLSTSSHPVDPAARRTRVVAKPIVIETNVWISTAATILAGVTLGENAVVAAGAVVTHDVPPNSLVAGVPARVIRQLA
>NZ_CP012159.1|WP_050430736.1|3531239_3532175_+|LysR-family-transcriptional-regulator
MDLDAVRTFVAVVEAGQFHAAAATLAVTQQAVSKRIATLETTLGVRLFARTPRGTQLTREGHVFLPHARELLAAEARALNSVRLDRRPLRVDVLSSRIGPAHVMREFHGAHPEIGISVVTHLFDVESALAALRSGAIDATFRAVTRPEEQLGGDIAAIRVLDDPVELLTGHAHELAGAASVTPAALAAHEVWMPSNVPGAEWSSYYEALSARFGLTIDTVGPNFGIEALLEAIAGSSTLATFVGEHIRLVWPSEYDLRRIPVRDPMLVYPHSMLFRIDDPHPGLAMLRRYLRSRKEHYRRPRAWTPSWAVH

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Crispr_ID: NZ_CP012159_17

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012159_17

4524009-4524861

Orphan

Consensus_repeat	Method
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	PILER-CR
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	CRISPRCasFinder
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	CRT

11 spacers

The CRISPR arrays of NZ_CP012159_17

>merge|NZ_CP012159|17|4524009-4524861|PILER-CR,CRISPRCasFinder,CRT
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAACACGTGGGCCGCGCGAGCTGGAGACCCGCTCGAGGACCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAACTTGTTGAGGCACGCGCCCGGGATCCGCAGTCGCGAGCCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAACAGCGGGATTGGCACACCAGGCGGGAAATCGACGATCGAGCCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAACTGGTGACGCAGTGAGCGCGCTCGACCTCTTCGATCGGACCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAACGAATAGTAGGTGATGGTTCGTCGCTCATCCCGTTCCCCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAACCGTGTCATGCGGTCCACGTCTTCGGCAGCCCCGAAGGCCCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAACGAATGCCAACGAAACCCTGGCACAACCCCTAGATTAACCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAACTCAGAGCTTCCGAGCTGAGCACGAAGTACTCGTTTGCCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAACAAAAGAGCACTATCGAATCTGACAACTGAGTGGTGTCAGCCCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAACGAGGGCGTCGAGCACGATCAGGCTGACGATGTAGCCGCCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAACAGGGAGACGGTAGGGAGACAGCCCACGGCCCCCGGACCCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGGAAC

>NZ_CP012159|17|2|4524009-4524861|PILER-CR
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	ACGTGGGCCGCGCGAGCTGGAGACCCGCTCGAGGA
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	TTGTTGAGGCACGCGCCCGGGATCCGCAGTCGCGAG
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	AGCGGGATTGGCACACCAGGCGGGAAATCGACGATCGAG
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	TGGTGACGCAGTGAGCGCGCTCGACCTCTTCGATCGGA
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	GAATAGTAGGTGATGGTTCGTCGCTCATCCCGTTCC
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	CGTGTCATGCGGTCCACGTCTTCGGCAGCCCCGAAGGC
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	GAATGCCAACGAAACCCTGGCACAACCCCTAGATTAA
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	TCAGAGCTTCCGAGCTGAGCACGAAGTACTCGTTTG
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	AAAAGAGCACTATCGAATCTGACAACTGAGTGGTGTCAGC
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	GAGGGCGTCGAGCACGATCAGGCTGACGATGTAGCCG
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	AGGGAGACGGTAGGGAGACAGCCCACGGCCCCCGGAC
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGGAAC

>NZ_CP012159|17|15|4524009-4524861|CRISPRCasFinder
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	ACGTGGGCCGCGCGAGCTGGAGACCCGCTCGAGGA
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	TTGTTGAGGCACGCGCCCGGGATCCGCAGTCGCGAG
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	AGCGGGATTGGCACACCAGGCGGGAAATCGACGATCGAG
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	TGGTGACGCAGTGAGCGCGCTCGACCTCTTCGATCGGA
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	GAATAGTAGGTGATGGTTCGTCGCTCATCCCGTTCC
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	CGTGTCATGCGGTCCACGTCTTCGGCAGCCCCGAAGGC
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	GAATGCCAACGAAACCCTGGCACAACCCCTAGATTAA
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	TCAGAGCTTCCGAGCTGAGCACGAAGTACTCGTTTG
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	AAAAGAGCACTATCGAATCTGACAACTGAGTGGTGTCAGC
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	GAGGGCGTCGAGCACGATCAGGCTGACGATGTAGCCG
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	AGGGAGACGGTAGGGAGACAGCCCACGGCCCCCGGAC
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGGAAC

>NZ_CP012159|17|4|4524009-4524861|CRT
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	ACGTGGGCCGCGCGAGCTGGAGACCCGCTCGAGGA
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	TTGTTGAGGCACGCGCCCGGGATCCGCAGTCGCGAG
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	AGCGGGATTGGCACACCAGGCGGGAAATCGACGATCGAG
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	TGGTGACGCAGTGAGCGCGCTCGACCTCTTCGATCGGA
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	GAATAGTAGGTGATGGTTCGTCGCTCATCCCGTTCC
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	CGTGTCATGCGGTCCACGTCTTCGGCAGCCCCGAAGGC
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	GAATGCCAACGAAACCCTGGCACAACCCCTAGATTAA
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	TCAGAGCTTCCGAGCTGAGCACGAAGTACTCGTTTG
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	AAAAGAGCACTATCGAATCTGACAACTGAGTGGTGTCAGC
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	GAGGGCGTCGAGCACGATCAGGCTGACGATGTAGCCG
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	AGGGAGACGGTAGGGAGACAGCCCACGGCCCCCGGAC
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGGAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012159.1\|WP_156338653.1\|4531452_4533099_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|215598
NZ_CP012159.1\|WP_050431374.1\|4525141_4526215_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050431372.1\|4522414_4523026_+\|NAD(P)H-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|377026
NZ_CP012159.1\|WP_050431366.1\|4516017_4516734_-\|anion-permease	unknown	unknown	gnl\|CDD\|376667
NZ_CP012159.1\|WP_050431367.1\|4516821_4517652_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176112
NZ_CP012159.1\|WP_050431381.1\|4539367_4540819_+\|outer-membrane-protein-transport-protein	unknown	unknown	gnl\|CDD\|367457
NZ_CP012159.1\|WP_063796290.1\|4533942_4535349_-\|bifunctional-UDP-N-acetylglucosamine-diphosphorylase/glucosamine-1-phosphate-N-acetyltransferase-GlmU	unknown	unknown	gnl\|CDD\|224128
NZ_CP012159.1\|WP_156338652.1\|4527069_4527219_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050431377.1\|4530435_4531254_+\|carboxypeptidase-regulatory-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|379297
NZ_CP012159.1\|WP_050431368.1\|4517695_4519618_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_063796291.1\|4535501_4539371_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050431371.1\|4521789_4522275_-\|redox-sensitive-transcriptional-activator-SoxR	unknown	unknown	gnl\|CDD\|133385
NZ_CP012159.1\|WP_050431376.1\|4528828_4530421_+\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP012159.1\|WP_050435931.1\|4527404_4528517_-\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NZ_CP012159.1\|WP_156338651.1\|4523101_4523242_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050431370.1\|4520938_4521391_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_082362547.1\|4515195_4515873_-\|HAD-hydrolase-like-protein	unknown	unknown	gnl\|CDD\|319809
NZ_CP012159.1\|WP_050431379.1\|4533146_4533836_+\|GTP-cyclohydrolase-II	unknown	unknown	gnl\|CDD\|238348
NZ_CP012159.1\|WP_050431369.1\|4519677_4520928_+\|choice-of-anchor-L-domain-containing-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050431364.1\|4514082_4515135_+\|DNA-polymerase-III-subunit-delta	unknown	unknown	gnl\|CDD\|273455

Protein	Function_ID	Function_description	E-value
NZ_CP012159.1\|WP_156338653.1\|4531452_4533099_+\|hypothetical-protein	gnl\|CDD\|215598	PLN03138, PLN03138, Protein TOC75; Provisional.	2.56891e-05
NZ_CP012159.1\|WP_050431372.1\|4522414_4523026_+\|NAD(P)H-dependent-oxidoreductase	gnl\|CDD\|377026	pfam03358, FMN_red, NADPH-dependent FMN reductase.	1.0026e-33
NZ_CP012159.1\|WP_050435931.1\|4527404_4528517_-\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	5.5889e-48
NZ_CP012159.1\|WP_050431367.1\|4516821_4517652_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176112	cd08420, PBP2_CysL_like, C-terminal substrate binding domain of LysR-type transcriptional regulator CysL, which activates the transcription of the cysJI operon encoding sulfite reductase, contains the type 2 periplasmic binding fold. CysL, also known as YwfK, is a regular of sulfur metabolism in Bacillus subtilis. Sulfur is required for the synthesis of proteins and essential cofactors in all living organism. Sulfur can be assimilated either from inorganic sources (sulfate and thiosulfate), or from organic sources (sulfate esters, sulfamates, and sulfonates). CysL activates the transcription of the cysJI operon encoding sulfite reductase, which reduces sulfite to sulfide. Both cysL mutant and cysJI mutant are unable to grow using sulfate or sulfite as the sulfur source. Like other LysR-type regulators, CysL also negatively regulates its own transcription. In Escherichia coli, three LysR-type activators are involved in the regulation of sulfur metabolism: CysB, Cbl and MetR. The topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	6.35872e-39
NZ_CP012159.1\|WP_050431381.1\|4539367_4540819_+\|outer-membrane-protein-transport-protein	gnl\|CDD\|367457	pfam03349, Toluene_X, Outer membrane protein transport protein (OMPP1/FadL/TodX). This family includes TodX from Pseudomonas putida F1 and TbuX from Ralstonia pickettii PKO1. These are membrane proteins of uncertain function that are involved in toluene catabolism. Related proteins involved in the degradation of similar aromatic hydrocarbons are also in this family, such as CymD. This family also includes FadL involved in translocation of long-chain fatty acids across the outer membrane. It is also a receptor for the bacteriophage T2.	1.08301e-24
NZ_CP012159.1\|WP_063796290.1\|4533942_4535349_-\|bifunctional-UDP-N-acetylglucosamine-diphosphorylase/glucosamine-1-phosphate-N-acetyltransferase-GlmU	gnl\|CDD\|224128	COG1207, GlmU, N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) [Cell envelope biogenesis, outer membrane].	0
NZ_CP012159.1\|WP_050431364.1\|4514082_4515135_+\|DNA-polymerase-III-subunit-delta	gnl\|CDD\|273455	TIGR01128, DNA_polymerase_III_subunit_delta, DNA polymerase III, delta subunit. DNA polymerase III delta (holA) and delta prime (holB) subunits are distinct proteins encoded by separate genes. The delta prime subunit (holB) exhibits sequence homology to the tau and gamma subunits (dnaX), but the delta subunit (holA) does not demonstrate this same homology with dnaX. The delta, delta prime, gamma, chi and psi subunits form the gamma complex subassembly of DNA polymerase III holoenzyme, which couples ATP to assemble the ring-shaped beta subunit around DNA forming a DNA sliding clamp. [DNA metabolism, DNA replication, recombination, and repair].	5.43359e-38
NZ_CP012159.1\|WP_050431377.1\|4530435_4531254_+\|carboxypeptidase-regulatory-like-domain-containing-protein	gnl\|CDD\|379297	pfam13620, CarboxypepD_reg, Carboxypeptidase regulatory-like domain.	0.000552745
NZ_CP012159.1\|WP_050431371.1\|4521789_4522275_-\|redox-sensitive-transcriptional-activator-SoxR	gnl\|CDD\|133385	cd01110, HTH_SoxR, Helix-Turn-Helix DNA binding domain of the SoxR transcription regulator. Helix-turn-helix (HTH) transcriptional regulator SoxR. The global regulator, SoxR, up-regulates gene expression of another transcription activator, SoxS, which directly stimulates the oxidative stress regulon genes in E. coli. The soxRS response renders the bacterial cell resistant to superoxide-generating agents, macrophage-generated nitric oxide, organic solvents, and antibiotics. The SoxR proteins share the N-terminal DNA binding domain with other transcription regulators of the MerR superfamily that promote transcription by reconfiguring the unusually long spacer between the -35 and -10 promoter elements. They also harbor a regulatory C-terminal domain containing an iron-sulfur center.	1.48416e-82
NZ_CP012159.1\|WP_050431376.1\|4528828_4530421_+\|serine/threonine-protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	2.05838e-76
NZ_CP012159.1\|WP_082362547.1\|4515195_4515873_-\|HAD-hydrolase-like-protein	gnl\|CDD\|319809	cd07506, HAD_like, uncharacterized family of the haloacid dehalogenase-like (HAD) hydrolase superfamily. The haloacid dehalogenase-like (HAD) hydrolases are a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members include 2-L-haloalkanoic acid dehalogenase (C-Cl bond hydrolysis), azetidine hydrolase (C-N bond hydrolysis); phosphonoacetaldehyde hydrolase (C-P bond hydrolysis), phosphoserine phosphatase and phosphomannomutase (CO-P bond hydrolysis), P-type ATPases (PO-P bond hydrolysis) and many others. Members are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	3.62378e-29
NZ_CP012159.1\|WP_050431379.1\|4533146_4533836_+\|GTP-cyclohydrolase-II	gnl\|CDD\|238348	cd00641, GTP_cyclohydro2, GTP cyclohydrolase II (RibA). GTP cyclohydrolase II catalyzes the conversion of GTP to 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5' phosphate, formate, pyrophosphate (APy), and GMP in the biosynthetic pathway of riboflavin. Riboflavin is the precursor molecule for the synthesis of the coenzymes flavin mononucleotide (FMN) and flavin adenine dinucleotide (FAD) which are essential to cell metabolism. The enzyme is present in plants and numerous pathogenic bacteria, especially gram negative organisms, who are dependent on endogenous synthesis of the vitamin because they lack an appropriate uptake system. For animals and humans, which lack this biosynthetic pathway, riboflavin is the essential vitamin B2. GTP cyclohydrolase II requires magnesium ions for activity and has a bound catalytic zinc. The functionally active form is thought to be a homodimer. A paralogous protein is encoded in the genome of Streptomyces coelicolor, which converts GTP to 2-amino-5-formylamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (FAPy), an activity that has otherwise been reported for unrelated GTP cyclohydrolases III.	3.95618e-104
NZ_CP012159.1\|WP_050431366.1\|4516017_4516734_-\|anion-permease	gnl\|CDD\|376667	pfam01925, TauE, Sulfite exporter TauE/SafE. This is a family of integral membrane proteins where the alignment appears to contain two duplicated modules of three transmembrane helices. The proteins are involved in the transport of anions across the cytoplasmic membrane during taurine metabolism as an exporter of sulfoacetate. This family used to be known as DUF81.	6.73644e-10

>NZ_CP012159.1|WP_156338651.1|4523101_4523242_-|hypothetical-protein
MLQCNARPDALTGEIRRRRGLLQGHPVTLLTLDPGGPTLRGVAFLA
>NZ_CP012159.1|WP_050431372.1|4522414_4523026_+|NAD(P)H-dependent-oxidoreductase
MNDDTSLTIGVILASLREGRMGAVFADWIADVLARREGITPEILDLRDWAFAPFGQDTVAGARDAPLPGPSLEERWRATIARLDAFIIVTPEFNHGYPGNLKNALDVVGTPWSHKPVSFVGYGYSAAGARAVEQLRLVAIELRMVPIRDELDMRLGGYAADARGVPVEPGILRQAEKLTDELSWFGRLLREGRQRRGAEATAR
>NZ_CP012159.1|WP_050431371.1|4521789_4522275_-|redox-sensitive-transcriptional-activator-SoxR
MQAGMELTVGQLAERSGVAVSALRFYEAEGLIHSRRTSGNQRRYARETLRRVAFIRVSQRVGIPLSVIRDALAKLPDRRTPTTEDWERLSKAWRAELDERIVTLQRLRDELTECIGCGCLSLDHCRLANPYDVLAKEGSGPRRWLCAKACDGGTCASSVEG
>NZ_CP012159.1|WP_050431370.1|4520938_4521391_-|hypothetical-protein
MVGRDRRGHTCAGLSSEARAWERRRLRELGLEDISWDHVRWCPRCRVSSGAMPGTISRWKLPADKRDELAKAPQTSTSASHEALAKAPQTSTSASHEALAKAPQTSTSASHESSASHEGMPPPAREDGITGGAGVGKERLARRRLRRRRV
>NZ_CP012159.1|WP_050431369.1|4519677_4520928_+|choice-of-anchor-L-domain-containing-protein
MRISPSGRFALTSLLISAGCAAFVACSAVGGDNGFGPSGGNPSGAGGGGTGGDDINLTSGAGGSAGGPLTSEPSCVGVDPNIDNDGDGWTGAAGDCNDCTAQMNPGAMDYPGNNIDEDCNGFVDDNPTSCDTGLPLTGDARTGARAMGFCKEAVGQSWGLLDAQWVTSDGQPRNSTSFNLGYGILSGFGPTVQPQEGQRLLALSSGTARQPSDNGYRSPMGYDKGYSTPAPPGYPKESPACPGVVTGTPYDSAALRVVVRTPTNSKSLRFKLNFYTYEFPEYVCDEYNDFFVAMLTPQLANTPDANISFDGQGNTISVNAGFLQVCHPQFAGGRNFPCPLGPGQLAGTGFDFVNNSAATGWLQTTAPIENPGQEITLLFTIWDSGDGVLDSTVLLDDFAFEAVPADTETQPVPPPQ
>NZ_CP012159.1|WP_050431368.1|4517695_4519618_+|hypothetical-protein
MLIAPAIVGCGLESLGPEPLQLEPGCNPLTTSEECLYPYPSAFVQRDDASSPTGVRMNFDAQKLPLRGGVTPLDVTPYNAADGVSPVSSILLHFGREIDTEPLPNQHELDQSIRDDCPIALIDQQTGARVPFFAEMDRNAKDDQIDRSALILRPVAPMEMGHRHVVLVRRGLKDTAGKEIEPTAAFKALVSGESTSSKDLEALRPRYESIFTLAESSGFTSGELLTAFDFMVASRDFVLGPILSMRERALEMVGTTGLPYKITEIQEDPNEHMAKIVFGEFEVPTFLRDDDSIEHDADHVPVLQTPNKSYPFTLLVPKKAADGPLPLVVLGHGIFGSGRSFLTSGGDGAAIQQIANDQGAVVIATDWIGLSENDLERLIQIADSLDKIHLVTDRLQQGIINALALTRLARGALKDDAQVKPTDGPLLDLDQTYYWGASLGGIQGSSFISLSPDIARAAFGVPGSAWSTMISRSSVFPPIKVFLQPHYPDPLDFLFGVTLIQARFDHSDPVNVSRLMFREPLPDAPPGRLVVLQEAIGDSQVPNLTTEILARAMGVKQLSPPVYDVFGLEQVTSPTTSSALAQYRMANYDKPAPPEENLPPSEDNGVHHDMNFLPNVHQQIFQLWLGGEIRQFCDGPCDPD
>NZ_CP012159.1|WP_050431367.1|4516821_4517652_+|LysR-family-transcriptional-regulator
MLDELKHFLLIVDHGTFTEAARRAHLSQPALTASVHRLEGWFGARLLSRGPGGAAPTAAGAALVPRARAALAAVEDGRRAVAEIEGLHAGEVRLGAGATACTYFLPPVLAKFRAKHPAVRFLLREATADEVLSALHEGTLDLGLVVSDEGELWREDELILVASPALASPERAPFVTFGRGSSTRTLLEQHFPGAQVVMELGSIASVKGNVRAGIGIALVSRQAVEHDLSVGRLVEVPHPATPIVRPLRIVHRGLDRLPPAAARLRAMLLARRQPSG
>NZ_CP012159.1|WP_050431366.1|4516017_4516734_-|anion-permease
MLLWTLLLPSGVLAGALTTVAGVGGGMLLLLVLSLVMSPAEALAITAPALFIGNFHRAYRYWSDVDRRTAKAFALGAVPGSLIGGVLVSSIPSTVLAWLLAGSTALAVARALDLLHFQPPPALLTPAGFGIGAASATSGGAGLLLAPVLMATGLSGTAYVATGAAATTAMHAGRIFAYGASGLVTATTLAASAMLAASLLGGNLLGERARKHLNATRSRRIETTTLVLCVGLALLGLR
>NZ_CP012159.1|WP_082362547.1|4515195_4515873_-|HAD-hydrolase-like-protein
MQPTVLLFDIDGTLISSGGAGRRSFEQAVFRVIDRRDVCDFSFAGMTDRAIARTALLNAGHEPSDEVIDRLVSTYITLLAEELPYSDCRVHPGIAEALEATANRPGVAIGLGTGNVLPGARLKLGRVGLFHRFSFGGYGCDHEVRHELLRIGASRGAAALGAPVDACRVVVIGDTPKDVAAAQAIGADCIAVATGQYGLDALVACNPTQAFQDLTADKALGALLG
>NZ_CP012159.1|WP_050431364.1|4514082_4515135_+|DNA-polymerase-III-subunit-delta
MTPDQALKEVSQGSLRPVYLVMGDERWYVDRVVSAIREAVAKGGIAGFNEDKFMAGEATVEAVLGAAKMLPMMAPRRFVLARGLERWEKKSDDGDEAAAPAKKGVSKQLPPLDALAEYAKTPASTAVLVLVASKLHAQRKLVTLAKKSDFLVACEQLPRRSLPGFIKTVAKEKGNAISGDVAEHLAEIAGPELGYVVDALERLSLFVGEKQPITEEAVAEIVIRVRQSTTWELLDAIGQRHLDKALATLADVYDPSDRGLKLLGLVAWSVRGLVKFDAALALGVSPQEAAQRAGVPPFKAGEMAQTVRRLPPGTLPRWLRLLAETDLALKGSKRPPQAILETMLLDMCAN
>NZ_CP012159.1|WP_050431374.1|4525141_4526215_+|hypothetical-protein
MLPPFAAEKRGRFRRLWDRLRSLEGALLPPFLLVAALMACKTGRIDIYTCPDPCEECEEPCACAEGTCVPVPPLGWEGPVLLWHGPPEGEPACPARAPAPVYEGHRGLKTIPECAQCACSPPTCQLPERVSASATSDVCLAGLETRMLPEGWDGACVEIEPLVAPESLRVGATSVGACEPVTITLQKASFGWETKAKGCVAAGAAEACARNHEVCAPLVETERDGFELCIYQRGDGRTESAQPGWGTSCPVGFPQVRVFYGGVADDSTCMPCSCGEPEGSACDGRMMLHEGSGCQGGRQEMLIGLDGGSCTAPSNPIPEIWSVEAALVLDEPGSCKPAGGQLVNGGVLLEPATFCCR
>NZ_CP012159.1|WP_156338652.1|4527069_4527219_+|hypothetical-protein
MLSSIPPQFASVRAEIRLLDPGTCMPQGGEFVGGFEPSEATTFCCAQER
>NZ_CP012159.1|WP_050435931.1|4527404_4528517_-|Gfo/Idh/MocA-family-oxidoreductase
MTNRIGVGIIGANPDRGWAVTAHIPALKALPAYEVRAVSTTRRATADATARRFGIPHAFADHHALVEHPDVDLVVVSVKVPRHHELVTTALNAGKHVYCEWPLGNGLAEADALRALAHEKGVHHAVGLQARAAPVIRQIRDLIARGDLGQILSTSAVASGRRWGGDIDTAGAYLLDHRNGATLLSIPGGHFLDALCHCLGEFRELSATIATRRTEAILTDTSGTVPFDTPDQIALSGVLQSGTVASLHLRGGLSRGTNLLWEINGTEGDLVITGPSGHVQMVDLRLQIARGKDAPLVDLPIPQEHHATTAQVPSGSPFNVAQLYALLAEDILKGTHHAPNFDAAVTRHEMLDAIERAAQTGTRQQLSAAP
>NZ_CP012159.1|WP_050431376.1|4528828_4530421_+|serine/threonine-protein-kinase
MSAAAPISVLGRYAIYEPIAAGGMARVYLGRQLGAAGFARTVAIKRMLPHLVEEQRLVTMFIDEARLAARIRHPNVVSILDVVSNGTELFLVMEYVVGDALFAIQRTLQKSGARVPPEIASSIVSSVLYGLHAAHEAVTEEGTPLGLVHRDVSPQNILVGVDGITRVLDFGVAKAAGRLQQTTQRGQLKGKLGYVAPEQLQTTMEVTRHADVYATGVVLWELLAGQRLFQGDNQGAVMLSILEGRIPSLAEVAPWVDAGLVRVVERAVARAAEERFASALEMANALERALSPASPGRVAAWVQEVAREVLAARAAVVTRVERAPLPLEVEDAPFSQRGSAPELPPPSSVSPWSDRLGPGPLLTPNPPSTLAPGAPSTLAPAASPGVRARPSRRRWMALAFGCAFAALLVAFAVRLGASSAGVWGGQGEPSVGSDGREGVAQHAQAAVPGSAPPVPVTEVASPDTAPDVSAGPGDQELRAGGPTEQPDGGTLDAGAAAVSTTVARPKNPCDPPYYVDKEGIQRVKRSCFPR
>NZ_CP012159.1|WP_050431377.1|4530435_4531254_+|carboxypeptidase-regulatory-like-domain-containing-protein
MALGVALALSSVQVAAAAESDESDACVSSYENSQQLRRNQDLVHAKAELRLCLGTCPRLLARDCERWLKEVEPQIGRVTPSIVDDEGHAVEGATLLIDGEPVRIDRQGAVEVNPGRHTIRAESPGLQASEQEVEVKAGERAPLTLTLTRPPRPQVPPPVAPPPVVVSSTPVLGLTLGGAGLLGLGVGGALAVFGHLERSSLLDECAPFCKQAEADAVRRLWIAGGVSAGVGAVLLGVGMGLILAKPSEEARVIQPVAHILPGSASLGVLGRF
>NZ_CP012159.1|WP_156338653.1|4531452_4533099_+|hypothetical-protein
MNRWIPLLGLACGLGACTLVELTNGQRPPAGEGGGGEMGGAGPGGSGPGPGGSGGGGEAGAGGAGGEGGGPWANGLCSSGPPGSQVDWVCHFGNDEDQDWSQSRVRLASHPEGVVLVASTAEPIAFGDEPRGDVGRQNVFVVSFDRDGHPRWSQALTGTATNKSVADVAVSPVDGSIAVAGWYENGNLELDGVAIAARGIDGYLFVFEADGTPRDARLFREVAGEASINTQRAFSVAFDDAGALYVGGEYRGQLAVRSMDGTTDANAGCALSSTAAMNMEGYVLKLEPGVNGGFECAWARKIGGALNERTTTVAALPNGGVAAGGYFRNVVTVDTTPPFSYDSPDDDSDDGFVLVLGDDGSMQAGGFVRIGGLNTDQVTQVRADGDSLHVVGHLSSGSTTMPGCDAIQVRGGDRDAFVAQILLDGAMCTHATKIASESSDDDGLGVATSAGWVGVVGIAGRDLTAGNVTMPYQGARDGFLMMLDVETGTPMHALPVGSLGDDAARAIAPVMGSPAFYVAGMYGGPIDELGLPRPTAPEDYFLARVRVP
>NZ_CP012159.1|WP_050431379.1|4533146_4533836_+|GTP-cyclohydrolase-II
MFISEALPRPQLVICAQAPVPTRVGLFDMLVFRYGDAAHAETGLSPDHVALVMGDVRGKRGVTVRVHSECLTSEVFGSLKCDCREQLEAAQEEVARRGLGVVIYLRQEGRGIGLSSKIRAYELQSRGHDTVDANRLLGLPDDARDYQPAAAILEHLGVSSIKLMTNNPEKVDALSKLGVEITARLPAIIRPNPFSASYLDAKRRRMGHALPPTHFEEGSSLGESVADAE
>NZ_CP012159.1|WP_063796290.1|4533942_4535349_-|bifunctional-UDP-N-acetylglucosamine-diphosphorylase/glucosamine-1-phosphate-N-acetyltransferase-GlmU
MTADQAAPLTAVILAAGQGTRMKSPLPKVLHPLCGRPMLHYVVDAAFQAGAADVVVVVGHGRDEVSAQLASAFGDRVRTAVQETQRGTGDAVRCALPQLRPEADAVLLLCGDTPLLEAEELKALWNALSASSGPLAMLTMTLPDPTGYGRILRGADGQVLGIREHKDASPEERAITEVNPGVYVARTAFLREALTRLTTDNAQGELYLTDIVAQAATAGGTSALSTRDPGSLAGINDRAQLAAAEDVLHHRIADAWRRKGATIRTSARIDASVALDPDAIIEHGVVLRGATRIGAGAHIDVGSVLTDVVVAAGAVLKPYTVAQRSSIGEKAQIGPFSHLRPDSEIHDEAHIGNFVETKKTVVRRGAKANHLAYLGDGDIGEGANVGAGTIFCNYDGFRKHKTEIGPGAFIGSDSQLVAPIRIGAGAYVGTGTTVTRDVPDDALAIGRARQENKEGYASRLKGRLKIGK
>NZ_CP012159.1|WP_063796291.1|4535501_4539371_+|hypothetical-protein
MRRRSFRSASGWWKRGCGLLGVTLLVGAAASCHEAFDTTRRALPRATLGDDLYGVLCDRVGASALAEDLTGASYQGVCHLDADGVYADEIDVAKLPTPTTGEAEQARRRAIARVDALVRRRSALIHAVNTAFPDVEIENVATEAGGDRIRLHDALLSYSQEIAALYETNPYVPGGKALLPESTRALGRLFAAFSESEAARGAFAQMWGRQGYRPSQVILGAIRATLAYPSMRALSRTSTEVLGPGGEGAPAFEQLLTVVEQELATARSNVAALPPLTLDPSTAQPNRPRSNVEILRTLLVRESPAFATSSGTGPAYIVARDRRGIALPLAGGPFVDADGDGLADIDGSGRFLSAGAPLSVDPPFVVPGSTPREALDSFGRPEPALYAYIDTSRTAGAALSRTLLPLTDPLLNATPGDPEAWKRENEALMYALAGAFTLYGDREAAAYDHQAEKILPAGQTCAHCTQYSRFRGEDSPLADVSHAMGQFLADPDSDALLLGVKDLLENHEAVVARVIGAALRAREFAAAHDEKALRGEEPRAEIPYETPIWDEMGELLGRMSDRPGLVKRLLSAFAARDAAGTPLLVKPTPSSWGPGVAHFGEAMGQFFRNRDQLSYDPGTSGTSRLNGPPVNLTVTAGSGSLSYVDPSTPVDWNAPRVGANRSILQRSLQLIHDAHGSTACNKQGAQVRVFGFPFGNYDQCSLFQFDNVATFYLDSALPAGHPKKSKIEIKNGFLGAMLDIADFFNISVDSVFEDGSGIDGLTLTPTSKALNRLVFFGADSTRYPNLPDLDPHRTTSNKDTNAFVSGLIEPASSSVCVKNAAGASQCAASVDLMRLRDGGVIFTWERLGFLDYLRPMILAFANEPCSASEGRDCGEVMFADFIRILNRHWSGPEHGPECLKSGTSASNPKYCSEAGVATYEPLLADVVEGDLVPAVVAFAEAVNELSAITVQRGPKAGEVWTGAEVLERVTRILFSKQYAGSVGMVDRKGSASTTWVDGTPQAQVTLFSLFADALHGFDQRFAQSGAADAQARKGQWRRARSQIVDALFAVQGEGEEARFKNRATPALLVTTVDLLREQLNAHCPAREGGEPCAWAKVGLGQKLAETLSGPLFAAITDVNEALRANEPARRELGRLLQHLLGGKSDAEALSATLASLTDLCQVLASDDVLAPVLRAAAVVANPGAEAEETGAAATLIPLMKALADDRFDRYHVLDHVLPAMVTPMEGEGVAPIEVMLDVIAEVNRLDADVEAPLSQQDYAEVFGAVSEFLTDETRGMEQLYAIVSRRERR
>NZ_CP012159.1|WP_050431381.1|4539367_4540819_+|outer-membrane-protein-transport-protein
MIGTRAGKFAGGAAALAFVIVALSKAAHAGGLYVADRGVRPLARAGAFVAGADDPGAMAYNPAGLFDSGTQFLVDGSWVNWSSDYTRRSLAQQLDPSTGEPVATYLQTFDEVSGSSPFLPIPTLAGSLRLSRAWALGVGVWAPYAALASYPEAVGGAPAPQRYALYNLRGSLLAFVGAGIAYAPTPELRLGAVVSMLTGSFRSEMAFSGCLPERFLCAPEDPDWDGAAALNAGPIFAPTGQLGVQWAPVPAWHFGLSFHLPVWVRTGGTVQTRLPASPVFERARVEGDSVDVAFDLPWTLRFGVEARVVKDLRVEVGVAWEHWSMHDAIQVTPDVALRGLPGFPEPFHVPPIALQRQFQDAVSLRVGGEYGFGWLDKRWEARGGLSFETSAVPAEYLTVLTMDAPKVTAALGLGVHLGRFRFDATFARVFAFDVDVAPEEARVTQVMPLRANPPRVPDTINGGVYSASTNVVGLGVAYKLDAL

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Crispr_ID: NZ_CP012159_18

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012159_18

4793091-4793323

Orphan

Consensus_repeat	Method
GGCGCCGACGTACCCAGTTTCGC	CRISPRCasFinder

5 spacers

csa3

The CRISPR arrays of NZ_CP012159_18

>merge|NZ_CP012159|18|4793091-4793323|CRISPRCasFinder
GCTGCCGACGAGGTCAGTTTCGGAGCGAGACCGCGTCCCTCGGTCGCCGACGGAGGCAGTTTCCGTGAAACCGGGAGCGCCGGCCGCCGACGGAGGCAGTTTCACGCCGGAACTGCCCCTGTCCGAGGGCGCCGACGTACCCAGTTTCGCTGCGGTACCCAGGTCGTCCTCCGCCGACGCACCCAGTTTCGCCGTGGAACTCGGGTCGTCGGCGCCGACGCACCCAGTTTCGC

>NZ_CP012159|18|16|4793091-4793323|CRISPRCasFinder
GCTGCCGACGAGGTCAGTTTCGG	AGCGAGACCGCGTCCCTCG
GTCGCCGACGGAGGCAGTTTCCG	TGAAACCGGGAGCGCCG
GCCGCCGACGGAGGCAGTTTCAC	GCCGGAACTGCCCCTGTCCGAG
GGCGCCGACGTACCCAGTTTCGC	TGCGGTACCCAGGTCGTCC
TCCGCCGACGCACCCAGTTTCGC	CGTGGAACTCGGGTCGTC
GGCGCCGACGCACCCAGTTTCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012159.1\|WP_050431553.1\|4804243_4805695_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|369639
NZ_CP012159.1\|WP_169796573.1\|4787826_4788267_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050431546.1\|4791213_4791699_-\|gluconokinase	unknown	unknown	gnl\|CDD\|225804
NZ_CP012159.1\|WP_050431547.1\|4791806_4792706_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379955
NZ_CP012159.1\|WP_050431551.1\|4801733_4802930_+\|acyl-CoA-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|173848
NZ_CP012159.1\|WP_050435963.1\|4793969_4794818_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_156339325.1\|4797544_4798960_-\|M20/M25/M40-family-metallo-hydrolase	unknown	unknown	gnl\|CDD\|349875
NZ_CP012159.1\|WP_050435962.1\|4790738_4791113_-\|winged-helix-turn-helix-transcriptional-regulator	csa3	COG0640_csa3_CAS-I-A	gnl\|CDD\|238042
NZ_CP012159.1\|WP_050431545.1\|4790292_4790742_-\|SRPBCC-domain-containing-protein	unknown	unknown	gnl\|CDD\|176856
NZ_CP012159.1\|WP_082362571.1\|4796032_4797268_-\|acetyl-CoA-C-acetyltransferase	unknown	unknown	gnl\|CDD\|236197
NZ_CP012159.1\|WP_063796299.1\|4799452_4800187_-\|nitroreductase-family-protein	unknown	unknown	gnl\|CDD\|380327
NZ_CP012159.1\|WP_050431544.1\|4788357_4790007_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|181362
NZ_CP012159.1\|WP_050431554.1\|4805691_4805916_-\|ferredoxin	unknown	unknown	gnl\|CDD\|224064
NZ_CP012159.1\|WP_063796300.1\|4800343_4801465_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176114
NZ_CP012159.1\|WP_050431548.1\|4794935_4795991_-\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381306
NZ_CP012159.1\|WP_082363467.1\|4777812_4781697_-\|protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP012159.1\|WP_050431552.1\|4802956_4804186_-\|cytochrome-P450	unknown	unknown	gnl\|CDD\|225035
NZ_CP012159.1\|WP_050431541.1\|4781891_4782746_-\|maleylpyruvate-isomerase-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|274422
NZ_CP012159.1\|WP_050431542.1\|4782886_4783939_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050435961.1\|4785427_4787533_-\|S9-family-peptidase	unknown	unknown	gnl\|CDD\|224422

Protein	Function_ID	Function_description	E-value
NZ_CP012159.1\|WP_050431553.1\|4804243_4805695_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|369639	pfam07992, Pyr_redox_2, Pyridine nucleotide-disulphide oxidoreductase. This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.	3.33833e-54
NZ_CP012159.1\|WP_050431546.1\|4791213_4791699_-\|gluconokinase	gnl\|CDD\|225804	COG3265, GntK, Gluconate kinase [Carbohydrate transport and metabolism].	6.90804e-67
NZ_CP012159.1\|WP_050431547.1\|4791806_4792706_-\|hypothetical-protein	gnl\|CDD\|379955	pfam17253, DUF5320, Family of unknown function (DUF5320). A number of this family members have a coiled coil domain at the C terminal.	4.05674e-06
NZ_CP012159.1\|WP_050431551.1\|4801733_4802930_+\|acyl-CoA-dehydrogenase-family-protein	gnl\|CDD\|173848	cd01159, NcnH, Naphthocyclinone hydroxylase. Naphthocyclinone is an aromatic polyketide and an antibiotic, which is active against Gram-positive bacteria. Polyketides are secondary metabolites, which have important biological functions such as antitumor, immunosupressive or antibiotic activities. NcnH is a hydroxylase involved in the biosynthesis of naphthocyclinone and possibly other polyketides.	1.16491e-60
NZ_CP012159.1\|WP_156339325.1\|4797544_4798960_-\|M20/M25/M40-family-metallo-hydrolase	gnl\|CDD\|349875	cd03879, M28_AAP, M28 Zn-peptidase Aeromonas (Vibrio) proteolytica aminopeptidase. Peptidase family M28; Aeromonas (Vibrio) proteolytica aminopeptidase (AAP; leucine aminopeptidase from Vibrio proteolyticus; Bacterial leucyl aminopeptidase; E.C. 3.4.11.10) subfamily. AAP is a small (32kDa), heat stable leucine aminopeptidase and is active as a monomer. Similar forms of the enzyme have been isolated from Escherichia coli and Staphylococcus thermophilus. Leucine aminopeptidases, in general, play important roles in many biological processes such as protein catabolism, hormone degradation, regulation of migration and cell proliferation, as well as HIV infection and proliferation. AAP is a broad-specificity enzyme, utilizing two zinc(II) ions in its active site to remove N-terminal amino acids, with preference for large hydrophobic amino acids in the P1 position of the substrate, Leu being the most efficiently cleaved. It can accommodate all residues, except Pro, Asp and Glu in the P1' position.	5.78547e-129
NZ_CP012159.1\|WP_050435962.1\|4790738_4791113_-\|winged-helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238042	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to dissociate from DNA in the presence of metal ions.	2.9538e-14
NZ_CP012159.1\|WP_050431545.1\|4790292_4790742_-\|SRPBCC-domain-containing-protein	gnl\|CDD\|176856	cd07814, SRPBCC_CalC_Aha1-like, Putative hydrophobic ligand-binding SRPBCC domain of Micromonospora echinospora CalC, human Aha1, and related proteins. This family includes the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain of Micromonospora echinospora CalC, human Aha1, and related proteins. Proteins in this group belong to the SRPBCC domain superfamily of proteins, which bind hydrophobic ligands. SRPBCC domains have a deep hydrophobic ligand-binding pocket. MeCalC confers resistance to the enediyne, calicheamicin gamma 1 (CLM), by a self sacrificing mechanism which results in inactivation of both CalC and the highly reactive diradical enediyne species. MeCalC can also inactivate two other enediynes, shishijimicin and namenamicin. A crucial Gly of the MeCalC CLM resistance mechanism is not conserved in this subgroup. This family also includes the C-terminal, Bet v1-like domain of Aha1, one of several co-chaperones, which regulate the dimeric chaperone Hsp90. Aha1 promotes dimerization of the N-terminal domains of Hsp90, and stimulates its low intrinsic ATPase activity, and may regulate the dwell time of Hsp90 with client proteins. Aha1 can act as either a positive or negative regulator of chaperone-dependent activation, depending on the client protein, but the mechanisms by which these opposing functions are achieved are unclear. Aha1 is upregulated in a number of tumor lines co-incident with the activation of several signaling kinases.	1.49494e-24
NZ_CP012159.1\|WP_082362571.1\|4796032_4797268_-\|acetyl-CoA-C-acetyltransferase	gnl\|CDD\|236197	PRK08242, PRK08242, acetyl-CoA C-acetyltransferase.	0
NZ_CP012159.1\|WP_063796299.1\|4799452_4800187_-\|nitroreductase-family-protein	gnl\|CDD\|380327	cd03370, nitroreductase, uncharacterized nitroreductase family proteins. Nitroreductase family containing Thermus thermophilus NADH oxidase and other, uncharacterized proteins. Nitroreductase catalyzes the reduction of nitroaromatic compounds such as nitrotoluenes, nitrofurans and nitroimidazoles. This process requires NAD(P)H as electron donor in an obligatory two-electron transfer and uses FMN as cofactor. The enzyme is typically a homodimer.	3.43422e-105
NZ_CP012159.1\|WP_050431544.1\|4788357_4790007_-\|hypothetical-protein	gnl\|CDD\|181362	PRK08296, PRK08296, hypothetical protein; Provisional.	0.00179142
NZ_CP012159.1\|WP_050431554.1\|4805691_4805916_-\|ferredoxin	gnl\|CDD\|224064	COG1141, Fer, Ferredoxin [Energy production and conversion].	1.83489e-05
NZ_CP012159.1\|WP_063796300.1\|4800343_4801465_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176114	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain. This CD includes the substrate binding domain of LysR-type transcriptional regulator (LTTR) CrgA and its related homologs. The LTTRs are acting as both auto-repressors and activators of target promoters, controlling operons involved in a wide variety of cellular processes such as amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to name a few. In contrast to the tetrameric form of other LTTRs, CrgA from Neisseria meningitides assembles into an octameric ring, which can bind up to four 63-bp DNA oligonucleotides. Phylogenetic cluster analysis further showed that the CrgA-like regulators form a subclass of the LTTRs that function as octamers. The CrgA is an auto-repressor of its own gene and activates the expression of the mdaB gene which coding for an NADPH-quinone reductase and that its action is increased by MBL (alpha-methylene-gamma-butyrolactone), an inducer of NADPH-quinone oxidoreductase. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.63552e-55
NZ_CP012159.1\|WP_050431548.1\|4794935_4795991_-\|aldo/keto-reductase	gnl\|CDD\|381306	cd19080, AKR_AKR9A_9B, AKR9A and AKR9B families of aldo-keto reductase (AKR). The AKR9A family includes Aspergillus nidulans sterigmatocystin biosynthesis dehydrogenase StcV, Aspergillus flavus norsolorinic acid reductase (NOR), and Phanerochaete chrysosporium aryl-alcohol dehydrogenase [NADP(+)] (AAD), are founding members of aldo-keto reductase family 9 member A1-3 (AKR9A1-3), respectively. StcV may be involved in the dehydration of 5'-hydroxyaverantin to form averufin. NOR is involved in aflatoxin biosynthesis. AAD (EC1.1.1.91) is involved in lignin degradation and reduces aromatic benzaldehydes to their respective alcohols in the presence of NADP(H). The AKR9B family includes Saccharomyces cerevisiae aryl-alcohol dehydrogenases AAD14p, AAD3p, AAD4p, and AAD10p, which are founding members of aldo-keto reductase family 9 member B1-4 (AKR9B1-4), respectively.	1.9022e-164
NZ_CP012159.1\|WP_082363467.1\|4777812_4781697_-\|protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	3.38055e-87
NZ_CP012159.1\|WP_050431552.1\|4802956_4804186_-\|cytochrome-P450	gnl\|CDD\|225035	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism].	1.51578e-86
NZ_CP012159.1\|WP_050431541.1\|4781891_4782746_-\|maleylpyruvate-isomerase-N-terminal-domain-containing-protein	gnl\|CDD\|274422	TIGR03083, TIGR03083, uncharacterized Actinobacterial protein TIGR03083. This protein family pulls together several groups of proteins, each very different from the others. They share in common three conserved regions. The first is a region of about 38 amino acids, nearly always at the N-terminus of a protein. This region has a bulky hydrophobic residue, usually Trp, at position 29, and a His residue at position 37 that is invariant, so far, in over 150 instances. The second conserved region has a motif [DE]xxxHxxD. The third conserved region contains a hydrophobic patch and a well-conserved Arg residue. Most examples are found in the Actinobacteria, including the genera Mycobacterium, Corynebacterium, Streptomyces, Nocardia, Frankia, etc. The pattern of near-invariant residues against a backdrop of extreme sequence divergence suggests enzymatic activity and conservation of active site residues.	5.41099e-05
NZ_CP012159.1\|WP_050435961.1\|4785427_4787533_-\|S9-family-peptidase	gnl\|CDD\|224422	COG1505, COG1505, Serine proteases of the peptidase family S9A [Amino acid transport and metabolism].	2.05997e-107

>NZ_CP012159.1|WP_050431547.1|4791806_4792706_-|hypothetical-protein
MAARTLTARAALLGLFNHVGYTLERLKAHALGAPHLTLFETIRTEGLQILTQELQIAHAQVGAQAQIDIADDQLDDFASRLSKEVLTLTDDNREHSLYLHFFRKKTLSEFKRPVLRAQLASMRGWIQSLTESEHPSLRALAPELTALIQEADAAVTARDSARQTNRIFRDTGDRSQWVDRLNAARKETHGALSKLPHERIGLPTDFADRFFYRGPKREDHEEEEETVESMQEHIEALREQLEAAEARLAELEAAEAEARKVAETHAAHVARLADIERAAAALEKERAAVRKQIAATAST
>NZ_CP012159.1|WP_050431546.1|4791213_4791699_-|gluconokinase
MVILVLGVSGAGKTTVGQKLAEAIGARFCDADDLHPRANLDKMAHGIPLDDDDRAPWLATLRRSIEQWLREDGDTVLACSALKASYRDLLAGDEVRVRLVFLRVPIEVARARVTERKGHFMPPGLLESQFEALEEPGDAIVVDATRPPDTLVHDIRVALAR
>NZ_CP012159.1|WP_050435962.1|4790738_4791113_-|winged-helix-turn-helix-transcriptional-regulator
MTTGEQHPALDQTLLALADPTRRAILQRLSRGEARVTELAAPFAISLNSVSKHIRMLERAELVRRRRVGREHFLSFNPAPLDEAARWIAERQAQWSRRLNALDALLQAEDLAATAPPEKKGRMR
>NZ_CP012159.1|WP_050431545.1|4790292_4790742_-|SRPBCC-domain-containing-protein
MSTDATVTAQVTHQFTASAERVFDAWLDPEKVKLWMAMPRPDGTPTELRRVALDPRVGGTFSFVDVRDGEEIEHTGEYLEIERPTRLVFTWSIPRYSPDVDRVTVEITPRSSGCEVKLSAEMAAQWAAHMTSIEKGWGHMLDAIDAVLR
>NZ_CP012159.1|WP_050431544.1|4788357_4790007_-|hypothetical-protein
MKNHPVVDRVTFEAPHAGPWELERVVFTRPLTRFIQESVTKALPRGLADGTARYGMLLSHVQLAAVNGFVYFRPVLHGMQPEVSWPPTGMFLWLMLRLQPSLRARMQTCRRAFETKRWRAELSLWDRVDRPLSIARNQALQAEDPAALDTDGLITHLSWARAHLEDMIEMHHRYDLAACLPMGDYLAHACAWTGASPEEALAALGEGSPGMGAVAPGELDALVRVIEGCAEAQAWMNAGRIGSDGHAGSQGRAGRDGRAGHAGHAGRDGHAGRARRAGSEERARSDGGGSNDEGEDGKAWRILEGLASLSGEAGEAARRLLEGARFRSVGFDVCEATGGEQPGRLVRAIQEALSALRNPETAGERLGRERALRERVPAEFRAQFDALLGEARGMSRLRLERGVYADQWAVGLARRALLEAGGRLVATGALVKAEHAVELSVEELGALLQGRGGLSASEVEARFRWRAEASFEVAPAWLNMPLLPMPSDTSLPPCAQRLARATQALGCTASVAREYGIPGMGRLGIEEAAPACSREVRRSKPLGAMSAMV
>NZ_CP012159.1|WP_169796573.1|4787826_4788267_-|hypothetical-protein
MFTNEIARQRVADLGAACGHPLTLIEESVWSEGPFGSASAASGELSPAGSLLGMNLRAHLTVTANEGGATDLWALIFVHVNGARVAPPGADYLMLKWETADGEGSRWVARGWEADVYGEWSEDEGEGEGEGEESEGEGEGEESEGD
>NZ_CP012159.1|WP_050435961.1|4785427_4787533_-|S9-family-peptidase
MKKRLDGVLEFPGARCDPEGSFAVHGRRFDDPFAWMERLDDAETQAWMAGQEVATRAVLDAVPGRDWLREVVARAARVARLSPPIRRGAEGRAFFWQAEASDDKPRFVLRRGEEAPLETVLDPNGWRAEEALVFAVPSPDGTLVAFGKAVGSTHGAEIRVLEVDTGRLLPDRPRGTDHASVAWLPDGSGFFYAACPGPGEVPAGDEAHWNAIYEHRLGSGEEARRVFGDDQVKEYWCTVHVSECGRFAVLSKWDFVHANVVYLLRLADGELVPVAPEMRSLNQVQVIGEALLIHTDLDAPRGRACVAPLAEPTAWRTLLPEGEDTLQSVTGVGGRLYAVHARGGCHRVSIHAEDGTYLRTLSLPALGAVNRNEGSGVVSGVSGAWGGSEVWVNFTSYVQPPSVYLYDDAADRLVPYHVPDVGLDASAYVTECVEYPSRDGTLVSMCLVHQRDLPRDGRRAVRLNGYGGFNISLEPRFSALNAAWLKLGGVLAFASVRGGGERGRAWHEAARKTRRQNAFDDYIAAARWLVSAGYTTPSRLVSRGNSNGGLLVAVTALQAPEAFGAVYCRAATLDMLRFPRFGHLSAATVEFGSPEDPVEGAYLAGYSPYHNVHADGRYPVMAFVSALNDRVAPPYDPLKMVARLQAEAPEGGPYLLLPLRDAGHGGGTTLTALVEQDVDELSFSCWALDVVVPSSSEVRGS
>NZ_CP012159.1|WP_050431542.1|4782886_4783939_+|hypothetical-protein
MRERWGAWCAAAGAILGGIALQGGAVAGEAPTCSAWKAAAAPHDRLELRACRAVETGTRGPGEAPRDEPLVHRLSVEGTPDDVGPTHEEPSEADDEDEIPDVQRPTSRDDRRTPVRIELRSGYDDTRKIRIELTASGGQVEILDLTATKGINQAGTCAACRDLSDLTAWRVLDGGVPPEPEVVRPIAGNTHMEVLARDLRLTDANAERLKRIAAAYFKATRKRLVVTGGTRPPQRQAELMYDKLKRGDDIVSLYENKQAVTEVRNAYRTGAAQALPRKTVVRLMKEVIDAQIARGVYISKHLRSGAVDVRSWDMVPAMEQAFREAVKKEPGVALMDERKSAEPHFHLTMP
>NZ_CP012159.1|WP_050431541.1|4781891_4782746_-|maleylpyruvate-isomerase-N-terminal-domain-containing-protein
MSNEPTPLGPRDVIDVRAALRRTLELQAELLEGFTPEDWLRPTVHGSRDVKDLVAHLLQGDMRRLSIQRDGFSLPTPPLRGVQDLTDFIQSGNRDWMAGMRRVSPRILMDLLAQYDAALLELLEGLDPQGEALFSVAWAGEETSRHWFDVAREYTEKWHHQQQIRDATERPALFEPALFEPVLETFARGLPHAYREVSCAQGTKVALILTGAVELSWTLRREASGWSLWKGADPSAVVEGTLDADKAWRIWTKAVTPLEADQCLSTVGERALAEPVLRFVGIMA
>NZ_CP012159.1|WP_082363467.1|4777812_4781697_-|protein-kinase
MRTGDVLAQRFRVDALAEAGGMGAVYRARDLLTGERVAAKVLLDPSPVHLARFEREAQILARLSHPGIVRHIAYDAPTGGTPFLIMEWLEGEDLSRLLARRRLSVDEGVELGVRVASALEAAHAHGVIHRDLKPGNIFLLGGKIAQPKLLDFGIAQPAGNYRLTGAGSLIGTPGYMAPEQARSGDDIGTPADVFALGCVMFECLTGTRPFQADHVMALLARIIFEEAPRVGQLCPEVPAWLDDLVARMLAKDPARRPRDGTAVLAEFAAREVREVTEAPASSTAISAITGSERRFLGVVVLGRPTLRTGDATLSVAGVHAAAGDLAGIAAAFEARLELLADGTAVFFVSTPMVPMDIAARVARCALSLAEQVPDRPLAMTIGWGELGVGLPVGDAIERAGSLLRKGPRPEPGARAPRILCDEATASLLEARFVVARALGGGLVLRGERSADEIWRPLLGKSTPFVGRDHELRLLSQTMASCVEEPAARVVVVTGPAGMGKSRLIQEHLEQQRRAGGPVEIWIGRGDPLRTRSTGGLLAAALRGAAGIRGSEQPEEQRAQVRALVGRNVPAQDQGRLSEFLGELIGVPFPDEESLPLRAARQDPDLLGEQMQRALRDLLRAECGAQPVMLVLEDVHWADRASVALVEGVLRELSDQPLLVLASARPEVEELFPQLWADRGRQVIRLGQLSPKAGMRLATQALGDAATSSLIERIVAQSEGHPFFLEELIRAAAEGRGQALPESVVAMVQVRLEALEPRMRLMLRAASVLGQVFWRGAVAHLIGSEGAALVEACLPALVDQELCVRHRQSRFSGEEEFTFRQALLREGAYGLLTEEDRALGHRLAAEWLEAAGEADPLVLAAHLERGGQPTRAAMFLLRGAELASARQAYLDAEQCYERAVELLGSLPVPALRGRGLTRFRLGRHRDAVADLTAARERAVAAREAGAEMELLLDEAMVLDWMGDFRTAEARVLAAQRHAAQVASPLLGARLMLGVGRSLHRANREAEAAAVLGLAVEQASRLGDQGYETHLIAQLLLGFILAELGRIEEAAQALGEAIGRCEARSDMLHLGAALSNRGLVHAYLGDRGAMIADFERTMALGRELGQPALELTGRYNLAECLFLMGDFEAAPPELRAIEAIVSRCGDHHPPAAVALLGARVRLVQGDEAGAREIVARIRSTEQALSPSEEVFCAMIDLATSDEVVGAWEALEARSACCSVGQERVEVLEARGLWLLRRGRRVEALTQLERAITAASTISTVMGCRLRGWISELLGSATVTTSSRPHHPTSSSPVCNQ
>NZ_CP012159.1|WP_050435963.1|4793969_4794818_+|hypothetical-protein
MLFKDHPSLAAEFLRDVLGAPLPRFSEVRVEPADLTEVVPAAHYADLVVLLLKKRPVLAIVVEVQLGRDPEKAYSWPSYAVAVRARYRCRVCLLVVTTDEGVARWAAEPIELGPPNFVLRPYVLGPRAVPLITDPAEARARPEIAVLSAMAHGRSEAGLSVALAALAAAAGLEEERQKLYVDVIMSSLNEAAKRSLEAMMKSGYEFESEFARRYVAQGRKEGAQSGALKAKAEAVIAVLEARELEVPESAREHILTATDLNELDCWIRRAAVVREASELFTV
>NZ_CP012159.1|WP_050431548.1|4794935_4795991_-|aldo/keto-reductase
MKIRTFGRQTGLRVSELALGTGNFGTAWGHGAERDEARKIFDGYVEAGGSFIDTADTYQVGQSEELVGEFVAPNRDDFVIATKYTMGVAMDAGFHATGNSRKNMIRSVEASLRRLKTDYIDLYWAHLPDGVTPTEEIVRAFDDLTRSGKILHAGLSNFPAWRVARADLLAELRGWAPIAGIQIEYSLAERTPDRELLPMAEALGLGAALWSPLGGGFLTGKYRAGEKGRLQGLGALVHTEKSARETAILDAVLGVAEELGTTPTHVAVAWLLHKAARSTTSLVPILGPRTRAQLDATLGATTVKLSEEQVARLDAPSAVPLGVPHEQVASTAPRVLGGQPDRFARSPLSVA
>NZ_CP012159.1|WP_082362571.1|4796032_4797268_-|acetyl-CoA-C-acetyltransferase
MNTSYIIDAMRTPRGRGKQGKGALSGIHPQALFAQVLNALAQRGGFEAGDVDDVMVGCVSQVGEQGANLARNAVLAAGWPQEVSGVSLNRFCGSGLQAVNFAAMAVASGAMDLAVAGGVESMSRVPMGADGGGQDGGNMQLRDRVFQVPQGISADLIASLEGLSREEVDALALLSQKNATRAIEERRFAKALFPVKDPRTGAVALAADEFPRPDTTAEGLAALKASFIALGEMAVGPNGETLDQIALAAYPQAKAIQHVHTAGNSSGIVDGAGAVVVASERYVREKGVKPRARIRAMATVGSEPLIMLTAPAPASEKALRMAGMKASDIDLWEINEAFAAVVLQTIRALGIAPDRVNVNGGSIALGHPLGATGAMLLGTALDELERSDKQTALITMCIGGGQGIATILERV
>NZ_CP012159.1|WP_156339325.1|4797544_4798960_-|M20/M25/M40-family-metallo-hydrolase
MARGEITGELETYDTNAEATVLRVSEEQIPAITRVMHDELHRCGGYVAHDSFTQATRALRAPLRRETPQSALVSYTINNAATVNTLLAAVEEPRIRSTISTLSSYTTRYYTSQSGVNAASWLRDTWQGFTAGRSDASVALRQHSGYPQPSVILTIEGAQTPGEVIVLGAHLDSTTFASSPTAAAPGADDDASGIATLTEVARVILQSGYRPARTVKFIGYAAEEVGLRGSGDIAAQHLSAGINVIGVLQLDMTNYKGSAQDIALVTDNTNAAQNQFLRDLITRYTNYTTVNTTCGYGCSDHASWHSRGFVVSLPFESRVSDGNPHIHTSADTLAQSGGNANHALKFAKLAAAYVAELAKGSTGSTNPDPEPSGPITQTFTGTVGQNQNVYHGPFAGQPGTSFTASLTGTGDADLYVRFGAQPTTSTYQCRPYLNGSNESCALQFPAGNSPAYVMVRGYTSATYTLTVTYQP
>NZ_CP012159.1|WP_063796299.1|4799452_4800187_-|nitroreductase-family-protein
MSTEHDTQTLSRSHDLAPLTVPEAIEARRSIRKYKPVPVSDADLTRIFELTSRAPSSINIQPWRFAFVRDTQLKTQLRAAAFDQAQVEAAPVVIVAYSDMTDALAHLDDVIHPGVQGEARQATFQRASGYFGSLDETKRKAFGDGQTFIAVGYLSLAAQSLGYATSIMGGFDPEKVKTLLGLPEPSTVVAVIALGVADETGYAPHRHALSRIVHEAGAAAAHEESPSVPAAPASALHASTVAQL
>NZ_CP012159.1|WP_063796300.1|4800343_4801465_+|LysR-family-transcriptional-regulator
MNDPAETSEMLAFCKAVASESLSRAAAELGVPRATVSRRLARLEERLGVRLLRRTTRSLTLTEAGEAFYRHARIALDAVASAEASVRRVDDVIRGALRVSLPFIDDASFDAMICDFKERHPEVRLHLETTTRIIDLHRDGYDVAIRASGALEPGLVARGLVRFQGLAVASPAYLAAHGTPRTARDLRRHRCLLGFVRGELPQMYWPLRGGGKVQVEGTFSANDVELLCHAAIRGLGIAFLPQSVASEALAAGALVQVLAGVVGNDMQVAVVYPEREFVPPQVRAFVDAVIAWAPSSLMARTPRGSALASRGREAQAAPQRIEPGAPVRRGAAKEAAGTTPAAPVRRGAAKRAASAPEAEDGQLVRRGGRRVRR
>NZ_CP012159.1|WP_050431551.1|4801733_4802930_+|acyl-CoA-dehydrogenase-family-protein
MKYSPVRLNAEAPCEHPVLAGARAIAQRVAARSEAIAAARRLPSDLVGELVEAGVFRMLVPEVYGGLELHPLVVVEVLEALARAESSTGWCAMSGAVMALSSAWLPEATAAAIHRDRGVIYGGMTVPLGRAELHGGSHTLSGRWPWVSGGEHCPWFVVGAVVTSAGQPRMLRSGAPETRLFVVPRRDVVLHDTWDAAGLRGTGSCDLEITNVRVPAERSFSLLDRPRVDRPLYGMPAFGLLSLGLPAVALGIARRGVEVMKETPLAWPLSGDAQAPPFRASRMAVRAAVTEGEASLRSARALLLKAVSGCFEGAQRREVSLRQRADLRLAYQHATRSAVRSVERLWEVAGGPEVPEAHPLSRCLNDLWVAAQHVAGDGPSAAPLGSTLLGVESQIAFF
>NZ_CP012159.1|WP_050431552.1|4802956_4804186_-|cytochrome-P450
MPRNDLFQQATRPAHRADPYPLYAELRQKPVWLQDDGSYVVSTYREVSALLYDPRVSADPMKRSDLPPIYTDPRMPRDQPSFIQLDEPKHGAMRRLTMKHFGPPRSAGRVSGMGARIGQIVDRLLDAHRDARQLDVVQDLSYPLPVMVICDLLGVPLDDEPLFREWSEVLTSSLDPDPALQNDPAFLERIGSAAVGIRTYMTNLLQGHRRTPNDSMLSAFVNDPEAREHITDGEFLSIAILMLIAGHETTVNLISNATLTLLRHPDQLARLRDDPTLMPGAIEEFLRYEPPVQYRERTTLTDISIAGTTIPKGASVNLVLAAANRDPLRFSEPDQFLLEREDNQHLSFGTGVHYCFGAPLARVEAQIALNELLRRLDNPELTADPPPYRFNPALRGPSHLVVAFDGMRA
>NZ_CP012159.1|WP_050431553.1|4804243_4805695_-|FAD-dependent-oxidoreductase
MTLADATKPGATRDRVVIVGASLAGLRAAEALRRAGFTGQLTLLGDEPHQPYDRPPLSKQVLAGSMPVEHTALARFHELDAQWRLGVRATGLSLADQHVHLADGQRVGFDRLIIATGARARPFPHPEQAALDGVFVLRSRDDASRLRARLDARPRRVLILGGGFIGSEVASVCRRLDLQVTVVERGPAPLANALGDVIGAIAATVQRKHGVDLRCGVTVTALEGDAQGRLQRAHLSDGEVLDVDLALIAIGPLRNTEWLTGSGLAADARGVVCDAHCRALDERGAAQENVFAAGDVARWPHPLYPDELLAVEHWSNAVEQARTAAHNAAQARGTSTPLRAHTLLPTFWSHQFGINIKSTGVPPLADAVIITQGSTEAHSFVAAYGQRGRIIAAVTFDQARMLPVYQAMIEASAPLPVALGASDEPHDAMAVPAGFSPIPQPGPTLATPPRTPAERAAVGEEPVQPPAARPTASDADRPPPTPA
>NZ_CP012159.1|WP_050431554.1|4805691_4805916_-|ferredoxin
MKVVVDLSRCEVYAQCVFASPTTFTLRGEEVLEYDPSPDDALRDEVVMAARACPVQAIKIGWAEEAPAVEEPTT

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Crispr_ID: NZ_CP012159_19

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012159_19

4865240-4865338

Orphan

Consensus_repeat	Method
CGTCCAGACGAGTCTCGCATCCCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP012159_19

>merge|NZ_CP012159|19|4865240-4865338|CRISPRCasFinder
CGTCCAGACGAGTCTCGCATCCCGCGTCGTCCAGGCGACGCATCCCGTGTGCCTGCCCCACGCGCTCGGCCGACACGTCCAGACGAGTCTCGCACCCCG

>NZ_CP012159|19|17|4865240-4865338|CRISPRCasFinder
CGTCCAGACGAGTCTCGCATCCCG	CGTCGTCCAGGCGACGCATCCCGTGTGCCTGCCCCACGCGCTCGGCCGACA
CGTCCAGACGAGTCTCGCACCCCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012159.1\|WP_156338691.1\|4866424_4868131_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|271320
NZ_CP012159.1\|WP_050431584.1\|4861700_4862162_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236138
NZ_CP012159.1\|WP_156338689.1\|4857984_4859133_+\|PLP-dependent-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|224089
NZ_CP012159.1\|WP_050431591.1\|4873579_4874707_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050435969.1\|4874709_4876071_-\|FecR-domain-containing-protein	unknown	unknown	gnl\|CDD\|377406
NZ_CP012159.1\|WP_050431588.1\|4868394_4869528_-\|cyanophycinase	unknown	unknown	gnl\|CDD\|153239
NZ_CP012159.1\|WP_050435970.1\|4876169_4876829_-\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|274357
NZ_CP012159.1\|WP_050431578.1\|4852084_4852567_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236766
NZ_CP012159.1\|WP_050431585.1\|4862258_4864946_-\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP012159.1\|WP_050431580.1\|4854152_4855226_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|369561
NZ_CP012159.1\|WP_050431589.1\|4870958_4872338_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050431582.1\|4857377_4857806_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_156338690.1\|4865408_4866428_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|240291
NZ_CP012159.1\|WP_050435966.1\|4855452_4856538_-\|phosphotransferase-family-protein	unknown	unknown	gnl\|CDD\|215473
NZ_CP012159.1\|WP_050435968.1\|4869615_4870707_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236090
NZ_CP012159.1\|WP_050431592.1\|4876981_4877623_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050431579.1\|4853669_4853951_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050431590.1\|4872397_4873381_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237537
NZ_CP012159.1\|WP_050435967.1\|4859267_4861508_+\|bifunctional-salicylyl-CoA-5-hydroxylase/oxidoreductase	unknown	unknown	gnl\|CDD\|236203
NZ_CP012159.1\|WP_050431581.1\|4856545_4857235_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP012159.1\|WP_050431584.1\|4861700_4862162_+\|hypothetical-protein	gnl\|CDD\|236138	PRK07994, PRK07994, DNA polymerase III subunits gamma and tau; Validated.	0.000730253
NZ_CP012159.1\|WP_156338689.1\|4857984_4859133_+\|PLP-dependent-aminotransferase-family-protein	gnl\|CDD\|224089	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism].	1.47341e-86
NZ_CP012159.1\|WP_050435969.1\|4874709_4876071_-\|FecR-domain-containing-protein	gnl\|CDD\|377406	pfam04773, FecR, FecR protein. FecR is involved in regulation of iron dicitrate transport. In the absence of citrate FecR inactivates FecI. FecR is probably a sensor that recognizes iron dicitrate in the periplasm.	1.42965e-07
NZ_CP012159.1\|WP_050431588.1\|4868394_4869528_-\|cyanophycinase	gnl\|CDD\|153239	cd03145, GAT1_cyanophycinase, Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. This group contains proteins similar to the extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Cyanophycinase is believed to be a serine-type exopeptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow.	1.90084e-39
NZ_CP012159.1\|WP_050435970.1\|4876169_4876829_-\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|274357	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family. This model encompasses all varieties of the sigma-70 type sigma factors including the ECF subfamily. A number of sigma factors have names with a different number than 70 (i.e. sigma-38), but in fact, all except for the Sigma-54 family (TIGR02395) are included within this family. Several Pfam models hit segments of these sequences including Sigma-70 region 2 (pfam04542) and Sigma-70, region 4 (pfam04545), but not always above their respective trusted cutoffs.	1.33852e-25
NZ_CP012159.1\|WP_050431578.1\|4852084_4852567_-\|hypothetical-protein	gnl\|CDD\|236766	PRK10811, rne, ribonuclease E; Reviewed.	0.00534182
NZ_CP012159.1\|WP_050431585.1\|4862258_4864946_-\|serine/threonine-protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	5.64423e-96
NZ_CP012159.1\|WP_050431580.1\|4854152_4855226_-\|alpha/beta-hydrolase	gnl\|CDD\|369561	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes.	1.41776e-82
NZ_CP012159.1\|WP_156338691.1\|4866424_4868131_-\|hypothetical-protein	gnl\|CDD\|271320	cd05819, NHL, NHL repeat unit of beta-propeller proteins. The NHL(NCL-1, HT2A and LIN-41)-repeat is found in multiple tandem copies, typically as 6 instances. It is about 40 residues long and resembles the WD repeat and other beta-propeller structures. The repeats have a catalytic activity in Peptidyl-glycine alpha-amidating monooxygenase; proteolysis has shown that the Peptidyl-alpha-hydroxyglycine alpha-amidating lyase (PAL) activity is localized to the repeats. Tripartite motif-containing protein 32 interacts with the activation domain of Tat. This interaction is mediated by the NHL repeats.	0.000270118
NZ_CP012159.1\|WP_156338690.1\|4865408_4866428_-\|hypothetical-protein	gnl\|CDD\|240291	PTZ00146, PTZ00146, fibrillarin; Provisional.	3.46524e-08
NZ_CP012159.1\|WP_050435966.1\|4855452_4856538_-\|phosphotransferase-family-protein	gnl\|CDD\|215473	PLN02876, PLN02876, acyl-CoA dehydrogenase.	1.44157e-107
NZ_CP012159.1\|WP_050435968.1\|4869615_4870707_-\|hypothetical-protein	gnl\|CDD\|236090	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated.	1.34513e-07
NZ_CP012159.1\|WP_050431590.1\|4872397_4873381_-\|hypothetical-protein	gnl\|CDD\|237537	PRK13875, PRK13875, conjugal transfer protein TrbL; Provisional.	0.000868064
NZ_CP012159.1\|WP_050435967.1\|4859267_4861508_+\|bifunctional-salicylyl-CoA-5-hydroxylase/oxidoreductase	gnl\|CDD\|236203	PRK08255, PRK08255, bifunctional salicylyl-CoA 5-hydroxylase/oxidoreductase.	0

>NZ_CP012159.1|WP_050431585.1|4862258_4864946_-|serine/threonine-protein-kinase
MRLKPGDTFDRYSIEESLGEGGMGEVYRALDTRLHRRVALKVLRRAPDADPTTWDEAAARMMREAQAAAALNHPNAVSLYDVGEHEGTPFLAMELVDGPPLRRYVGTQVPQSTRIRWLLDVACALAAAHRVGVVHRDVKPENVMLRSDGVIKVLDFGIARRVRTSLEAPMGDGSDATAATITSPGKLIGTPAYMAPEQIRAEEADGRADQFSWGVMAYELLSGRLPFGHGRDVLAVIAAVLGDQPAPLEGVPESIAAVVARAMSKRREDRFASMDDVVELLEPFITGEMNAPSSRRLSAVMIRPEPPLLELNLRRDLATINAPTTTPTQSRRRPRWQLAGFAGVALGVATALGLGWAVSTNLEPPEMAPSTSSSSSDVVTPITSLPAPQTTSPQALTAYREGLQAFRDAQWYVAQQAFLRAVELDPFFAAAHLRLAQTHQNLRTQDPGRAHFQRAISLRAALGPRDQALMEVYEPLLLRDPADVDEGVRRLQQASRRYPDDMEFLSLQALHVRRNDPAASLALASRCVERDPAYADCWQAKGKALEALGRAGEAYDAIEECVRVSPAATDCLRDRARMHARAGRCSDYEQDLRTSLAQHAGIESRYLSLAEATYAIGRPPAAVHAVLEQLRAHATGQATEVQHTLYEANLMVLGGDLRGARSLVRELHQKHHQGAQEATLLSGTRLLEIALSLQLGDAHQAARDAAEHRGVLEARLGSSSQVTRDPTMTLLHAELEGELLTRSQYVARREAWLRAWELKLPPQQRGQAWLRGYAFPASTQAEAEEALAALPRFQPLPLYREPDQEEALGRVNQLAGRSAEARASLVEFTRACVALRFPVTHTVAHHHLGLSLEAQGDTTGACAAYRVVLSRWPVASGAVTSKATAARVKALGCPN
>NZ_CP012159.1|WP_050431584.1|4861700_4862162_+|hypothetical-protein
MKGASSAILAIVLSSPMALAQQAASPPDTKVTPAISAPDKTPAPVDPAAERSRVANERWWAELVVTTARAASSETRTSAGVSKGVGSSPFAPSRSTPSPIQDSPIQEGNDSWKSVAPPSNLQGSVPSPVAPRSPASEPPRFGVPSFSFPFGPR
>NZ_CP012159.1|WP_050435967.1|4859267_4861508_+|bifunctional-salicylyl-CoA-5-hydroxylase/oxidoreductase
MGGGPAGLYFALLMKKARPDSSVTVLERNRADDTFGFGVVFSDATLENLAQADLPTYQAITRRFSHWNDIDIQYRGQLLRSTGHGFSGLSRQALLDILQERARNLGVELNFEQEIRPDATLPGVDLLVIADGVNSALRTRFAAWFQPEIDERPNRFVWLGTTFPFDAFTFWFKETRDGLFMVHAYRYEEERSTFIVECSADTFARAGLDPADEDATLVYCERLFAEELKGHRLLKNRSVWRQFPTVKNARWHHERMVLLGDAAHTAHFSIGSGTKLAMEDAIALVDALGEKKTVPEALEAYETERRKVVQSTQRAAQVSLSWFESAERYLGMEPLPFAFGLLSRSLRVTHENLQLRDPAFVAQVDARFAGMAEKQSGQPLARGLRGDAPPPMFTPFRLRDVVFPNRVVVSPMCMYSATEGTIDDWHLVHLGSRAMGGAGLVMTEMTDVSAEARITPGCAGMYTEEHARAFARVVDFVHHHTPAKIGIQLGHAGRKGATRLMWEGMDQPLADGGWSLLSASPLPYFPHSQVPREMDRGAMDRVIADFERAASLSVQAGFDLLEVHLAHGYLLASFISPLTNHRTDDYGGTIEQRMRFPLEVFDAVRAIWPASRPMSARISAADWAPGGLPPEDAVAVARLLKQHGCDIIDVSTGQTVAEARPEFGRLFQVPFSDRVRHEVGLPTMAVGAISSWADVNSVLAAERADLCCLGRAHLYDPYWTRHAARDQGFDLPWPSQYAVARDFSPR
>NZ_CP012159.1|WP_156338689.1|4857984_4859133_+|PLP-dependent-aminotransferase-family-protein
MDVRIDQLMRTGAAAPGIITLGGGLPAPELFPRRALMASFQRVMMDPSGAALQYGWPEGSEGLRGWIAERLRRRGADVSASDVIITSGAQQALAVASQVLFQRGDRVGCEPESYPGALDLFGTRGVLPVVGHDDVRALYVMPAVSNPHGRAMTTTDRRRWLDHAHAAQLPLLEDDAYAELRFDGPPHRPLLADARHLVWHIGTLSKTLCPGLRVGWLVAPPVMYRRALEAKQALDLQANSLALALLEDFLGRHDYDALVARARRFYHRRALHLAATLSRRLPSFRFTAPEGGFTLWAETDCDGDDRDLLEFALQHGVSFDPGRSFRVDLRSSRIALRLSFATESSARQDEGVARLARAWDMWRGRTPRVQNDDAAARTPVVA
>NZ_CP012159.1|WP_050431582.1|4857377_4857806_-|hypothetical-protein
MSVPGLVLPVLVSALFVLGCNTPNDAPSSGAPSGSAASSPSGSAASPVAKGSTTAEETAVREAFLRYREALIARKGDEAVALVTTKTIAHYDAMRLAALRMPAAEVRARPLMDLMFILSLRARSPKEELLRSTGAPARFCSS
>NZ_CP012159.1|WP_050431581.1|4856545_4857235_-|hypothetical-protein
MRRSPLLLALLVASSLVTACGKSGDTTTTTSTTEAIGDADQAAVRDIFLRYRDAIVTRKGKEAVGVVSTKTLGYFDAMRTGALHMSASELRAQPVMDRLMILLLRARIPKEELQGWTGKELFAVAVDNGWVGDNVQSIQPSTIEIQGNEARIGARAGGEELPSAMGFKAYREEGGWKLDVMSIGEIAQQALQEQLGQIDPDADRALLMLLSQLLQRKLDASIFEPIAPR
>NZ_CP012159.1|WP_050435966.1|4855452_4856538_-|phosphotransferase-family-protein
MSLVPPSSTRPPRDAHRLDEAALTRWLATHVEGCEDATVTVRQFKGGQSNPTYWLGVASREGSAPHALELVLRKKPPGDLLPSAHAVEREYRILRALADTDVPVPPALALCEDGAVVGTPFFVMRYVPGRIFWDPGLPEASGPEERRAIYGDFIRALAALHQVDPAAVGLGDYGKVGGFIARQVQRWSKQYEASRTGEVRSMDALMAWLGANVPARDETTIIHGDCRIDNVIFAPDAPQALALIDWELSTLGHPISDLAYVCMGYHLNLPGRGSLVGVDLAAAGIPSEDEFVQTYCRLTGRDGIDDWPYFMAFGIFRLAAIAQGVYKRSLQGNASSEDAGMYGAAVGILSELGCRIAGVRA
>NZ_CP012159.1|WP_050431580.1|4854152_4855226_-|alpha/beta-hydrolase
MAPGLLKDLRLELMRRTAHAILHAPPRVLRAFAGPERRSPEGYLLDLQTQALLRLNERLGVTLEDSNLPRARARMDHSTKILAPRIVPAPLQYERRIPVAGGTIAARIYIPEPLGKGLSPMIAFFHGGGFVLGSLDSHDGECQALAAKVQAIVVSIEYRLAPEHHFPSAVDDALAAFRWVAENATALGGDPARIAVAGDSAGGNLAAVISRETRGDAHKPVFQLLVYPATDMTRSHPSHRYFREGLLLTEESINFFLAHYLRSDEDQREPRASPLLASDHEGLPPAMILTAGFDSLRDEGDAYAAALKAAGVAVEHRCYETLVHGFFSMSGVVDVARDAFEFAVGGLRRGLAVQSGK
>NZ_CP012159.1|WP_050431579.1|4853669_4853951_+|hypothetical-protein
MKKMISMLALMLTASFAVGCAVEAGEETDLQDVDAEETAVAEDAVATEARGGEAERAVCPPVGTCQRASQLCIQPPSSWCTILNTCIDLNCDM
>NZ_CP012159.1|WP_050431578.1|4852084_4852567_-|hypothetical-protein
MDPRAKTDSEPATEAREETVDIVRAPSVAEAIETTAVAEIVEDPFAAAGPVNTVIHQTVINTVIVMAPQAATATSSVPESPRSAPRSAPEVEKPAARAQAASAQEARKAAAAALRQQIEELGATAEAAGEQLSRVGDAAAALHQQLAELKAAVERLKQGR
>NZ_CP012159.1|WP_156338690.1|4865408_4866428_-|hypothetical-protein
MKTTLLSSNRWARRGSSPRVGVSTLGWMTLALTLAGAVGACGGNGAAGSGGGGGSPGGTGGAPGTGGMGGGGAGGAGGTGAGPGSGGEGGGSLGQGGLVDRGLLVRYFIDEATSGIVGELNDSAPTPLPLRITPSPGLQFVTESGANRGLQWDSIELDGRASAAVSGTKLTRLEGSTTGTIEVVLDIHAVAPLNSRISHIGFDQESGRFSLGANTTSRLQFRWQSNVLGGEWEVPLSSLGRAVVHLVLDTEPPDPEARVKLYVNGAPQARVGGVLPSQAQAIQLGTDPHYVLGNREVGVRSFEGRLHYAAMYTEALSSEDVLHNTALLLVSDDTPSAAP
>NZ_CP012159.1|WP_156338691.1|4866424_4868131_-|hypothetical-protein
MTSGTGAGAAGGAGGEGPVEACAPGEERACYGGPPGTQEVGICQGGTQVCQDDGRFGPCAGEVLPAQETCAPADEDCDGQVNEQGACYGGPEGTEGVGACRAGVLYCDVAPDGVCLGEVRPHVEECATAVDDDCDGVANDHCALWNRRFGGGEHEHSWGVAVDSDGSVVVVGDIISPTDFGGGPLTSSGLRDVFVAKFDASGNYQWARRFGNDQDQSASAVALSPSGEVYVTGWFEGTMNLGSSTLISNGGTDAFILKLDPSGNVEWGTRHGNAADQAGIAIAATDDGAAMVGRFAGTVTLAGQVRTSNGQEDAFLLRVDEHGAPQWGHAVGGSARDEATGVAFAANGDVVLAGSFGDTIDFAGTVLETEGESDVFVTRYDAMGNHVWSTPIGGNGQQEALGLALDAAGAVLVTGRFTSEIALAGQTRMGAGAWDAFVAKLGSGGQPLWGQAFVGPDDQVGNAVTTDQARNVVLAVGQRGTVDYGSGPVLSAGMEDMVLVQLTPDGEHRYTRRFGDELDQDPRSVAIDGSGNVLMTGDCMGVVDFGRGPLQSNATGQQEDICLVKIAQ
>NZ_CP012159.1|WP_050431588.1|4868394_4869528_-|cyanophycinase
MRSTVSPRSPRSLLSLGALLSLAFSVVAVGCSSDGGGGTGGSGASVGEGGSGATGGAGGTGGAGGDDVEETPPKPAGLVNYITGNPEDAKVEPIGRALLLMGGGAEAIDSLQWWMPFANRGDVVVLRTTGADGYNDFLYSDIGGCDSVETMLVDSRQLADDPYVVHRIRHAEAVFLAGGDQSTYLKNWMGTGVQEALMYAWERGAALGGTSAGCAVLGQFSFAAYNDTVYSDEALRDPYNEFMTLERDFVSLAPLAGVITDSHLQARDRMGRLVTFLGRLIQDGWSSAPLGVGIDEYTALGVDPSGVGTVFGEGATYVVKTSAPPTSCEAGQPFAMSGLTVHKLVAGDTVELPAGTTSVAGQPLEAENEALIPADPY
>NZ_CP012159.1|WP_050435968.1|4869615_4870707_-|hypothetical-protein
MRRIGLLVMAAISTAALGCAGSRAPSSTPADAPAAAQPGPVLAERPAPGPESAPEAPAPQALGGVGSSSDGGQGQASPVQATPPPPPAAAGASAEGRVASATGGSRAPKKLDASPKGATTPRSPTQDPADAKVAERRREAEAQKSRPGLGTEWGETRTSQITTAPFIRADASNPFAMDSLHYNDEQGAQAMAGLAGFKRTTSRPFTIAGGAVEMGLRAENGRFLNGFVTEQDRFVVGEHGIRYTIVLRNQTDLRFECVLSVDGLDVLDGQAASFTKRGYILPPQGELEIEGFRQSMDAVAAFRFGSVRNSYASQKHGDSRNVGVIGVALFHERGTTPWTPEEIRRRQQANPFPGQFATPPGRP
>NZ_CP012159.1|WP_050431589.1|4870958_4872338_-|hypothetical-protein
MSRSRLGFALVVGPLVALAGCGDEEVRRGDEGCSVLEQTGCASGLACEEVEDGEPACFTPLVVRGRVLDAGTAAGVAGAHVIARDANSAAVSRVAVSGPDGGYALQVAAKRDREGRPVVASVTLRADAAGYQSFPRAPRVALPLDLATATGKPLAIESVATEILLLELEDVAGLGTVSGTVAARAPGGTLVTAGGATGVADFDGAFTVFNVPAGSHEVRGYAEGLRLASARVAVDAGRVTSGVVLSSLGEARAAVSGKVSIVDAPGGSETSVILVPVETFDASAKRGEAPRGLRVGGVRGGFVIEGVPDGTYKVLAAFENDGLVRDPDTSIGGTAIVEITVADADVSLSESFKVTEALAVIRPGAERMDEVQGTPEFVWADDSSEGRYEIQVFDAYGNLVWEDPNLPSVSGNAEVKVTYGGPPLEPGMIYQFRATSMSKGQNATPLSQTEDLRGVFLYR
>NZ_CP012159.1|WP_050431590.1|4872397_4873381_-|hypothetical-protein
MNVRAIASIAFVAVTCGVGCSEKTVDGANTAGAGASSGTSGDGGAGLNGAGGAGGLLPSGAGGAGASTSGVGGAPTEISPCQNQIYECGDLIDNDGDGLIDSQDPDCLGPCDNTEGSYYGGIPGQAGPPCIVDCYWDSNSGAGNDACYWSHRCDPNEVAPSYYPEPENGATCAYDPTTIYPGSGMNCAALEQSQSQQCHEVCGPLTPNGCDCFGCCELPAGSGKFIWLGSEGVDGNTVCTADAIDDPTRCHPCKPVPSCLNSCGPCEVCVGKPAPDPGCPPSSGSGGGGGNGTQQCESGVQPCGLAGQDHCPPFHYCITGCCRPVPQ
>NZ_CP012159.1|WP_050431591.1|4873579_4874707_-|hypothetical-protein
MRGGGLRKGARGKVGGWLVGWAVVFAGVGAGRAVQAEPRPRVVILNADGADAVQREATTRLRAELRAAGFEVVEAQGAQEGARTAQEGARAGSAEESDLARAARVFEGVAAVKVARSRGGASVTLWLREREGRGRTRAVSAQGRSAPSVVAVRAVEELQASQLGVEGGARATEVEAGSAPEEEAARRGEVGAEGAAKPRLGTAAVEGGVGLLLGGGVGPAVGPFLRVSLGAELSGRPGEVLAARVTLAGPAFAPDLAGAVGSVSVRQELALVEVVYSLGALGPLVPRVSVGAGAYHLRAVGDPRSPYEATSGEVWAALVGAGAGVGWSLGERLSVVVDAQVLFAQPRPVVALAGERLGAPGRPSVGGFLGLLVVL
>NZ_CP012159.1|WP_050435969.1|4874709_4876071_-|FecR-domain-containing-protein
MERLAEVARVGLPEGDDAALDARGQERLVAAVARGDGRSVKRRGALRRGVTLLAAAVVAAGVAMVLVDRKLDYVVEHAVATQEGYVAAPVDGEARLRFSDGSEVVLAQGASLRVGEVTSRGARVVLEGGLASVQIRPRGGARWSVEAGPFAIEVTGTAFDVAWAQAKGELVVHLREGSVVVRGPASPEGVSLQAGQRLVVQAHEGALQISSAEEAALEAAGDQEETRGAAGAVALGRRGEGGEVGGPEGASRGEREEGEETAADGTAGRDGAQGKESDGGAAGRAGSAQTGGREPGGAASEARSWSKRVADGEFAAVLAEAEARGLDAVLAGGSLDQVSAVADAARYAGRADVARRALVSMRRRFAASSQGKAAAFLLGRMADGGAPSEAIGWYDTYLAESPGGAFASEALGRKMMATQRTSGKAAARAIAERYLARYPGGAHASAARALVHP
>NZ_CP012159.1|WP_050435970.1|4876169_4876829_-|sigma-70-family-RNA-polymerase-sigma-factor
MQALPLVATDDVALAKAAAAGHPGAATVIWTRFAPLVRRLLRRTLGPGDEVEDHVQETFLRFFRLVGELRDPALLQSYVVGITLRVAREALRRRRLRRWLTLTPSGVLPEAAGVSADPAARAAVLRLYALLDQVDDRSRVLFVLRYIEGLELTEIGRALGCSLATVKRHLARATQRILAGASRDPVLAGYVDAPGGLAERVAGEGRDEGDGRDEGVRRG
>NZ_CP012159.1|WP_050431592.1|4876981_4877623_-|hypothetical-protein
MSTCVAGAVAEANQQQDGNERVRGVVKPCPVQLVLTIQRIREWPKNDEGTSANAKQGGTISTYKLERVGTRKALTEGFMLEAAGPSTKTAGTDQRIPAGTYGIIDNPGTKGPYRFVQTSKSLATATFGERFEVNIHVGNFPTELEGCFCPGQSWSDNEGAFPSVSTSRPQVKELETHIEGEGTTEVVKTYDGRDEHSRKYFTNVTVIVREIAT

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Crispr_ID: NZ_CP012159_20

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012159_20

5218498-5218662

Orphan

Consensus_repeat	Method
CCTAATTTTTATCTCTGCACTCGTAAGGGATTCAGGAG	CRISPRCasFinder

1 spacers

WYL

The CRISPR arrays of NZ_CP012159_20

>merge|NZ_CP012159|20|5218498-5218662|CRISPRCasFinder
CCTAATTTTTATCTCATCGGGGTCAGGTGACTCAGGAGATTTCCTAATTTTTATCTCTGCACTCGTAAGGGATTCAGGAGTTCTCTGAATTTTTGTCTCGTCGGGGTCAGAGGGACTCAGGCATTCCCCTAATTTTTATCTCTGCACTCGTAAGGGACTCAGGAG

>NZ_CP012159|20|18|5218498-5218662|CRISPRCasFinder
CCTAATTTTTATCTCATCGGGGTCAGGTGACTCAGGAG	ATTTCCTAATTTTTATCTCTGCACTCGTAAGGGATTCAGGAGTTCTCTGAATTTTTGTCTCGTCGGGGTCAGAGGGACTCAGGCATTCC
CCTAATTTTTATCTCTGCACTCGTAAGGGACTCAGGAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012159.1\|WP_050431798.1\|5214015_5217924_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|164795
NZ_CP012159.1\|WP_156338725.1\|5196946_5198398_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379980
NZ_CP012159.1\|WP_082363472.1\|5198462_5199248_-\|formylglycine-generating-enzyme-family-protein	unknown	unknown	gnl\|CDD\|224182
NZ_CP012159.1\|WP_050435987.1\|5200045_5201770_+\|OmpA-family-protein	unknown	unknown	gnl\|CDD\|143586
NZ_CP012159.1\|WP_050431792.1\|5194931_5196242_-\|thymidine-phosphorylase	unknown	unknown	gnl\|CDD\|180276
NZ_CP012159.1\|WP_050431805.1\|5232158_5232770_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050431804.1\|5230778_5232065_-\|(2Fe-2S)-binding-protein	unknown	unknown	gnl\|CDD\|379229
NZ_CP012159.1\|WP_050431797.1\|5211184_5214019_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|371546
NZ_CP012159.1\|WP_050431799.1\|5219417_5220794_+\|WYL-domain-containing-protein	WYL	pfam13280_WYL_CAS-I:CAS-III	gnl\|CDD\|379100
NZ_CP012159.1\|WP_082363474.1\|5222592_5223162_-\|lytic-transglycosylase-domain-containing-protein	unknown	unknown	gnl\|CDD\|381594
NZ_CP012159.1\|WP_156338726.1\|5202079_5203297_+\|putative-metal-binding-motif-containing-protein	unknown	unknown	gnl\|CDD\|338048
NZ_CP012159.1\|WP_050431795.1\|5204053_5206885_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050431802.1\|5227150_5227528_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050431801.1\|5223553_5225617_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_082363473.1\|5203750_5203999_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050431800.1\|5220944_5222360_-\|KamA-family-radical-SAM-protein	unknown	unknown	gnl\|CDD\|224426
NZ_CP012159.1\|WP_050431803.1\|5230055_5230742_+\|heme-exporter-protein-CcmB	unknown	unknown	gnl\|CDD\|225260
NZ_CP012159.1\|WP_169796595.1\|5206881_5210865_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|164795
NZ_CP012159.1\|WP_063796601.1\|5232811_5233405_+\|nicotinate-(nicotinamide)-nucleotide-adenylyltransferase	unknown	unknown	gnl\|CDD\|185680
NZ_CP012159.1\|WP_082362616.1\|5227810_5229742_+\|biosynthetic-arginine-decarboxylase	unknown	unknown	gnl\|CDD\|235427

Protein	Function_ID	Function_description	E-value
NZ_CP012159.1\|WP_050431798.1\|5214015_5217924_-\|hypothetical-protein	gnl\|CDD\|164795	PHA00370, III, attachment protein.	0.00103225
NZ_CP012159.1\|WP_156338725.1\|5196946_5198398_+\|hypothetical-protein	gnl\|CDD\|379980	pfam17517, IgGFc_binding, IgGFc binding protein. This domain is found at the N terminal of human IgGFc-binding protein and has been shown to confer IgG Fc binding activity. It may play a role in immune protection and inflammation in the intestines of primates.	6.51665e-88
NZ_CP012159.1\|WP_082363472.1\|5198462_5199248_-\|formylglycine-generating-enzyme-family-protein	gnl\|CDD\|224182	COG1262, COG1262, Uncharacterized conserved protein [Function unknown].	1.28922e-27
NZ_CP012159.1\|WP_050435987.1\|5200045_5201770_+\|OmpA-family-protein	gnl\|CDD\|143586	cd07185, OmpA_C-like, Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA. OmpA-like domains (named after the C-terminal domain of Escherichia coli OmpA protein) have been shown to non-covalently associate with peptidoglycan, a network of glycan chains composed of disaccharides, which are crosslinked via short peptide bridges. Well-studied members of this family include the Escherichia coli outer membrane protein OmpA, the Escherichia coli lipoprotein PAL, Neisseria meningitdis RmpM, which interact with the outer membrane, as well as the Escherichia coli motor protein MotB, and the Vibrio flagellar motor proteins PomB and MotY, which interact with the inner membrane.	1.42946e-41
NZ_CP012159.1\|WP_050431792.1\|5194931_5196242_-\|thymidine-phosphorylase	gnl\|CDD\|180276	PRK05820, deoA, thymidine phosphorylase; Reviewed.	0
NZ_CP012159.1\|WP_063796601.1\|5232811_5233405_+\|nicotinate-(nicotinamide)-nucleotide-adenylyltransferase	gnl\|CDD\|185680	cd02165, NMNAT, Nicotinamide/nicotinate mononucleotide adenylyltransferase. Nicotinamide/nicotinate mononucleotide (NMN/ NaMN)adenylyltransferase (NMNAT). NMNAT represents the primary bacterial and eukaryotic adenylyltransferases for nicotinamide-nucleotide and for the deamido form, nicotinate nucleotide. It is an indispensable enzyme in the biosynthesis of NAD(+) and NADP(+). Nicotinamide-nucleotide adenylyltransferase synthesizes NAD via the salvage pathway, while nicotinate-nucleotide adenylyltransferase synthesizes the immediate precursor of NAD via the de novo pathway. Human NMNAT displays unique dual substrate specificity toward both NMN and NaMN, and can participate in both de novo and salvage pathways of NAD synthesis.	5.75399e-48
NZ_CP012159.1\|WP_050431804.1\|5230778_5232065_-\|(2Fe-2S)-binding-protein	gnl\|CDD\|379229	pfam13510, Fer2_4, 2Fe-2S iron-sulfur cluster binding domain. The 2Fe-2S ferredoxin family have a general core structure consisting of beta(2)-alpha-beta(2) which a beta-grasp type fold. The domain is around one hundred amino acids with four conserved cysteine residues to which the 2Fe-2S cluster is ligated. This cluster appears within sarcosine oxidase proteins.	6.13261e-24
NZ_CP012159.1\|WP_050431797.1\|5211184_5214019_-\|hypothetical-protein	gnl\|CDD\|371546	pfam11468, PTase_Orf2, Aromatic prenyltransferase Orf2. In vivo Orf2 attaches a geranyl group to a 1,3,6,8-tetrahydroxynaphthalene-derived polyketide during naphterpin biosynthesis. In vitro, Orf2 catalyzes carbon-carbon based and carbon-oxygen based prenylation of hydroxyl-containing aromatic acceptors of synthetic, microbial and plant origin.	0.000194358
NZ_CP012159.1\|WP_050431799.1\|5219417_5220794_+\|WYL-domain-containing-protein	gnl\|CDD\|379100	pfam13280, WYL, WYL domain. WYL is a Sm-like SH3 beta-barrel fold containing domain. It is a member of the WYL-like superfamily, named for three conserved amino acids found in a subset of the superfamily. However, these residues are not strongly conserved throughout the family. Rather, the conservation pattern includes four basic residues and a position often occupied by a cysteine, which are predicted to line a ligand-binding groove typical of the Sm-like SH3 beta-barrels. A WYL domain protein (sll7009) is a negative regulator of the I-D CRISPR-Cas system in Synechocystis sp. It is predicted to be a ligand-sensing domain that could bind negatively charged ligands, such as nucleotides or nucleic acid fragments, to regulate CRISPR-Cas and other defense systems such as the abortive infection AbiG system.	4.68928e-38
NZ_CP012159.1\|WP_082363474.1\|5222592_5223162_-\|lytic-transglycosylase-domain-containing-protein	gnl\|CDD\|381594	cd00254, LT-like, lytic transglycosylase(LT)-like domain. Members include the soluble and insoluble membrane-bound LTs in bacteria and LTs in bacteriophage lambda. LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue.	2.51222e-46
NZ_CP012159.1\|WP_156338726.1\|5202079_5203297_+\|putative-metal-binding-motif-containing-protein	gnl\|CDD\|338048	pfam11617, Cu-binding_MopE, Putative metal-binding motif. The seqeunce of structure 2vov is not matched in any other sequence either in UniProt or in NCBI (Sep2014). The model is of a short repeat not found on the G1UBC6 - 2vov - protein. The presence of conserved cysteine residues and the lack of hydrophobic residues suggests that this repeat might be a metal-binding site, perhaps for zinc or calcium ions.	0.00383839
NZ_CP012159.1\|WP_050431800.1\|5220944_5222360_-\|KamA-family-radical-SAM-protein	gnl\|CDD\|224426	COG1509, KamA, Lysine 2,3-aminomutase [Amino acid transport and metabolism].	5.05055e-120
NZ_CP012159.1\|WP_050431803.1\|5230055_5230742_+\|heme-exporter-protein-CcmB	gnl\|CDD\|225260	COG2386, CcmB, ABC-type transport system involved in cytochrome c biogenesis, permease component [Posttranslational modification, protein turnover, chaperones].	5.18027e-22
NZ_CP012159.1\|WP_169796595.1\|5206881_5210865_-\|hypothetical-protein	gnl\|CDD\|164795	PHA00370, III, attachment protein.	0.00398443
NZ_CP012159.1\|WP_082362616.1\|5227810_5229742_+\|biosynthetic-arginine-decarboxylase	gnl\|CDD\|235427	PRK05354, PRK05354, biosynthetic arginine decarboxylase.	0

>NZ_CP012159.1|WP_050431798.1|5214015_5217924_-|hypothetical-protein
MTVALAGVASALTALVSSPAHAQYDCSSPNPAHWPPPAKPYFMLAMDTSGSMTITVNGNNSCAYPNDRLGHGRCAIRKTVQAFSGQANFGLATFARRMLTCTGNQSPCQFINPNPFTHLCTYADLPNNSGGDQGNPNNGAGLTCDSGCGWEPTPGAPNSSTRRGANILVPLPQDIGLNPPSNVADLLAYVDNDCSDNRELFATGCTPLNGILRGLHTYYQDQWQLPPSGPPTYPSPLTSTANGERGCRSVNVILVTDGGETCDQPADAVAAAAALYNGFTKDGIFWRVRTFVIDFGDAGDAANQIANAGGTFSAQRATNEAQLSIALSNIISGSVAPEVCDNVDNNCNGCIDEGYRHYCNVKPAGQCCAWATPAQRTTCLNNYTASITSANPGGNLALLPCTTVPQSQNPITGLCYNPGEICDEADNNCQFGVDEGMLKCGSPLQCPSPEVCDGRDNDCDGAIDEGLNGCNLCVPSVEVCDGCDNDCDGIADNGIAPVACGLASPPNCAGTASCTPQAVPYPGACVPGGFSQCNNNPQAEICDGIDNNCNGIVDDQVPPTACVPPGAPPGLVFGGTSQCRQGSQPCNGVCQGYVGPSPEICDGIDNDCDGLIDEDVLGVGQSCGIDQAPCQAGTTACVNGVLVCQGGVGPQPEVCDGVDNNCDGAIDNAPLADAPPAGQTGCWNMPGNCCQWPPGSPSVTWCPPAGASCSGNGSLAPPCNRGTLVCSGGGWQCQGGTLPFAEVCDGVDNNCNGQIDEGNIPQVGLPCGSDVGECVPGTLACAGGVLSCVGSVGPQTEICDGLDNDCDGQTDEDALVGGPCQPSYDTTLFPGVRTAAPCMPGVLQCDASGAAVCVGGVGPQPEVCDGIDNDCDGIIDEPGPAPDGITGQGVIGQPCGEAVGTCSQGVYVCLNGSVQCQGGQLPHTELCDCQDNNCDGMVDNPPAGGSLCSAGKECVQGPNGCGCAPPCASGEFPCPPGQRCVEATSSPGGATGHYCVPDLELICGNCATRTVTGAGNHVVCAPAGSAASQCGQVPECVCKGQNGCQEPCFGVVCSPGQQCARIGPHAGQCVTDVSCWSIPCTGGCAEACHDGVCRTNPCVPTSGETAPCPADQACKPSTDWSSAECIPSCVGVSCPDGQACQQGECQVACTPGCTAGQACDTTATPPACVQCPADCASGCCNAAGQCIDCPCSGVICPEGQICREGSCFEGEMSSGVGGSGGSSSNGTGTGGATSTSSGGPNGQGGDEGGVWGLPTGGGGCSCEVGPGAGERRGWGGLAGVGLALAFALRRRRDARGAQEVVR
>NZ_CP012159.1|WP_050431797.1|5211184_5214019_-|hypothetical-protein
MSRVSSRWLKRGLSFCVSGWGFLALSLAGLSSTTGCSNPAYCFTDCPGDTTTSSGTQGTGGNGEGGCLFGCGDGGNGADGQGGNGAGNCIPDDPPNEVCDLRDNDCNGLVDDIPGIDYESLTSCGTCSKNCLQELLNNDLGTIQCIPSQNPGTTPGQCVGSCAADYHDLDGNGSCEYYCLGGSQPESICNNIDDDCDGLVDEEVNYCDSVTDCGACGYACNVLHGTPTCVNNGASPCTLLNTHCAIDACDCTGPGNCWHDLDGVYATGCEYQCFPTGPELCGDGIDNDCDGLLDGADDLSQDPAIGVACQGGVEGVCADPAHAGVTACVNGLVACIGPDVIVPNQLQESCNNLDDNCDGVIDNNPVDVGGACGVSNIFPCSLGTFQCVNGAPSCIGAVPPGLEICNGIDDDCDGMIDFTVATNSPPSDVGNPCGVYPPPPQGATSPCSAGATACIGGLIACQGAVGPLASSDTCGIDANCDGTLTNQPNLNTDVANCGACGNNCYAGAVHSIQACVNGVCQSQGCQPGYWDLDGDGLCEYACTFTQAQEVCNGVDDNCNGQIDEGVIAPSPVQVCGVSPSATRPECTSGVTVTCNNGAWQCAFPPGVCTGGNCAATPEVCDTLDNNCNGVVNENFPNWGKPCNSDDGIQPGHGACRTTGTYACTSPTTVACNAVKADCATLPGGCTELCDGIDNDCDGLVDETFNNRGQNATYFVRPAVTRIGANSWIHSYEASRPSATSTDSGHGNGYWTQAIAGATRDATPACSVPGRLPWFNVSPDEVQQTCTAMGGTICSLADWQTACRATVNCAYGYAPRNSGAATTCTTPAVAGTKYCNLGSTYDFDPVTPGIQDGLLPGASSALQSCWADWSGLQGNTPASERIFDITGNLWEITVKPGGAFGLMGGAFSTQNQEAAGCDFTFYTVEQGFKFYDAGFRCCFSSNPTQ
>NZ_CP012159.1|WP_169796595.1|5206881_5210865_-|hypothetical-protein
MARTQYPVPRSPNLRSSIPRLFTATTFGIALSALSGSASAQYDCSSPDPTRWPPASKPYFMLGFDTSGSMADTVTQSGLPHPDSCQFGTNRLSHGRCAVRNTVQAFSGQVNFGLATFATRIISCNNAASCPCTNDTNACFSGCSYGCFPLELQTRPPCTGCGGILNNDPTTSAGAYIRVPMLRDHFWSQPPTAPNVNTMLNWADNSCGQGSFPQGGQELFARGNTPLNGMLRDMFRYYSGTWVPPDGSVALPSPLAAEDLAGPGVNGGTGCRSVNVILITDGDETCDTHQDAVNAAAALYQTGVTVGGKNFKVRTFVINFVGGSPANANAIAAAGGTGSSHFATNEVQLSQALATIIAGATSPEVCDNVDNNCNGCVDEGYQHYCNVKPAGQCCAWSTPAQRTTCINNYTASITSANPGGDLALLPCTTVVQSQNSSTWLCHNPGEICDDADNNCQAGVDEGMVKCGSPLHCPMPEVCDGADNNCNGQIDEGGVCAACVPSPEVCDGCDNDCDGIADNGIAPVACGLASPPNCAGTATCTPQPVPQPGACVPGGFGQCSNNPQPEVCDGIDNNCNGIVDDQVPPTACVPPGAPPGLVFGGNSQCRQGSQPCNGVCQGYVGPSPEICDGIDNDCDGQIDEDVLGVGQSCGIDQAPCQAGTTACVNGVLVCQGGVGPQPEVCDGVDNNCDGAVDNAPLADAPPAGQTGCWNMPGSCCQWPPGSPSVTWCPPAGASCNGNGTLTPPCNRGTLVCSGGGWQCQGGTLPFAEVCDGVDNNCNGQIDEGNIPQVGLPCGSDVGECVPGSLACAGGVLACVGNVGPSPEVCDGLDNNCNGQIDDGIPSGGPCTPYYDTTLFPGPRTAAPCSPGVFQCDANGDAICVGGVGPQPEICDGIDNDCDGIIDEPGPAPDGITGQGVIGQPCGEAVGTCSQGVYVCQNGNVLCQGGQLPHTEICDCQDNNCDGTVDNPPAGGSLCSAGKECVQGPGGCGCAPPCASGEFPCPPGQRCVEATSSPGGASGRYCVPDLELICGNCATRTVTGAGNHVVCAPAGSAASQCGQVPECECKGQNGCQEPCFGVVCSPGQQCARIGPHAGQCVSDVSCWSIPCAGGCAEACHNGVCQTNPCVPTSGETAPCAADQGCKPNTDWSSAECVPSCVGVSCPSGQACHLGECQVACTPGCAAGQACDTTATPPACVQCPADCASGCCNAAGQCIDCPCSGVICPEGQVCREGSCFERDGSSGVGGAGGSSSNGTGAGGATSTSSGGPNGQGGDEGGVWGLPTGGGGCSCEVGPGALEQKGWGGLAGIGLALALALRRRRDARGAQEVVR
>NZ_CP012159.1|WP_050431795.1|5204053_5206885_-|hypothetical-protein
MSTSSFVTAQGGRWSAMKRGWLSLALAFTAVVSGAGAAGCNNPAYCFTDCPGDTTTSSGTQGTGGNGEGGCLLDCGNGGSGADGQGGSGNCIPDDPPNEVCDLRDNDCNGLVDDIPGIDYESLTSCGTCSKNCLQELLNNDLGTIQCIPSQNPGTTPGQCVGSCAADYHDLDGNGSCEYYCLGGSQPESICNNIDDDCDGLIDEEVNYCDSVTDCGACGYACNVLHGTPTCVNNGASPCTLLNTHCAIDACDCTGPGNCWHDLDGVYATGCEYQCFPTGPELCGDGIDNDCDGLLDGADDLSQDPAIGIACQGGAEGVCADPAHAGVTACVNGLVTCVGPNVIVPNQLQESCNNLDDNCDGVIDNNPVDVGGACGVSNIFPCSLGTFQCVNGAPSCVGAVPPGLEICNGIDDDCDGMIDFTVATNSPPSDVGNACGVYPPPPQGATSPCSAGTTACVGGLIACQGAVGPLASSDTCGIDANCDGTLTNQPNLNTDVANCGACGNNCYAGAVHSIQACVNGVCQSQGCQPGYWDLDGDGLCEYACTFTQAQEVCNGVDDNCNGQIDEGVIAPSPVQVCGVSPSATRPECTSGVTVTCNNGAWQCAFPPGVCTGGNCAATPEVCDTLDNNCNGVVNENFPNWGKPCNSDDGVQPGHGACRTTGTFVCNGPNAVACNAVKADCATLPGGCTELCDGIDNDCDGLVDETFNDKGQNATHFVRPSVTRVSPTRWMYRYESSRANALATDPGSGNGFHCSGNGCTGVPTAPSGVTLDRTRSCSVQNRLPWFNVTPVEAEQTCQAVGGFLCDTSLWTTSCQAGANCTWGYSPTGTTCTTVATTSKRCNLGPTFDTDPSLPGDQDALLVTGSPLLSNCWANWGAGGNLFDITGNLREITKSGPNTYPLMGGAFNTAAENGATCSFRYYTVDEVFKLFDTGFRCCFSADPTL
>NZ_CP012159.1|WP_082363473.1|5203750_5203999_+|hypothetical-protein
MQGWMKSVLGPATSSGDPEKLAKALAYVATKPPPGMGEWVTISNDGVAKAKAGDIEGAKTSCKKCHDLYKDTYKRTLRDSPW
>NZ_CP012159.1|WP_156338726.1|5202079_5203297_+|putative-metal-binding-motif-containing-protein
MSRFALKMLGIAGVFGVFAACSATKGGDNSFGGSETTSSDGTSQGGHGAAGGDSGEGGIAIETGSGGGGSQPPCIDTPGVDDDGDGFADPEDCNDCDPNVNPAAMEVMTAEGADPVDEDCDGEIDNIAGTCDENLLVEDPDPMSAVRALDICRNAQGPRDWGLLGAAWVRANGTPLTAPTNQYGIQPNFGPNVSPRGGDRMLAISSGRARLPGQTGACTTESCNGHGLGTAPSGFPQSVTGCPVGSSINDDVGLQVHMRAPSNATGLRFNFRFYSFEYPEFVCMSYNDQFIALMNPAPAGAANGNISFDSMGNPVSVNVAFFDVCEGCPLGIADLLGTGFDTLDDAGATGWLATTAPVKGGQEVSLRFAIWDTGDQQYDSTALIDNFEWIATGGTVPVGTTPEPQ
>NZ_CP012159.1|WP_050435987.1|5200045_5201770_+|OmpA-family-protein
MQGRDVPSRQRRGWARRSVALVVAATALAPAVATAQDRTFYLDRLRIGGAPEDGLGVWRPEMGKQTRIFGQLGMGFSLNPLRTDNYVDDERLEEQLAGNPVDRQLITYFSAGAEFFDRVAIQASFPLIVNQAGAVTGEGADGRPVPGIREAVGPAPVAPMDLRLDARVIVFRTPDRAFKLAVTGAVFVPTGNEVEYGGDINVAGSLGLAAEYDFRKFFVTVNVGGAIRPPAQLHEFNVGSELTYGAAAYVPLLDDRLRVGAEIFGSFGLRSSTFGELDASPIEWMAAGKYFFTQKKQVFVGAGAGTRLSGGYAPDFRGLLVVGGAFNIADVETRAPDFRFVIEKEKDTDGDGYPDVIDLCPEDKEDGKAPKPSDGCPDMPDRDGDGIPDVVDLCPDEPEDMDGIDDRDGCPETDADQDGVPDAEDKCPKEPGQPVAEDPSKNGCPYYIRRITGSAEIQILKQVEFQFDSWTILPRSFPILDEVVRLFKANPEIKLVSIEGHTDNQGTVEYNQKLADSRANAVRLYLINRGVERQRLTSKGFGSTRPLDSNDTEQGRQRNRRVEFHIISQSIEGR
>NZ_CP012159.1|WP_082363472.1|5198462_5199248_-|formylglycine-generating-enzyme-family-protein
MPGGKFNRSNDASYPATVRDFHLDVYEVTVGRFRAFVEAGKGTKADPPMEGDGAHPTLAGSGWRYEWNDSLEASTTLLRAALKCPYTWNWTDGVGPNEQRPIGCISWYEAFAFCAWDGGRLPTEAEWEHAAAGGSQQRQWPWGSEFDATRTSYRCLGDGDPSCTPNDLRPVGTYSPAGDGRWGHADLAGNAAEMMLDWHSTNPNYPLPCDDCAQLTAGTNKILKGGSAWAPTTSGLMSASRTWENPTTRGVILGVRCVRRF
>NZ_CP012159.1|WP_156338725.1|5196946_5198398_+|hypothetical-protein
MKTAINAPGACFAAFVANTWDRPVKISVERNGIQYNAANFAYIPVVQGQSVDYEPYDDAAGLDVGQVAILFLSRNNSGGPVAPPCPRTPAVSAETGVNTTGMGNAFRIETDYPVVAYQLVPFGGGQTNVTGASLLLPTSAWDTNYITINGFASSEPEVQNGNPSLTVVASRDGTEVNLLPGVNVVGGNGIPATVAGTMATYSLDKGRFLQITQPEELTGSPISSNHPVGVWGAHSCMMVPNTGVADCDSSQQQLAPVRALGSEYAPAPYVKRGANDPPFYRLIGAVDGTQLTWTPSAPPGAPTSLSLGQVAQFSAPDAFVVRSQDSSHPFYAGQYMTGGAQFAGSTAGIGDPEWVTVIPPSQFMDYYAFFTDATYPETSIVVVRTRSKVDGSFADVTLDCTGPLTGWQPFGDYEYTQVRLVTGNFQSVDGCMNGRHEMSSTLPFGVTVWGWGTTSTTSLVSYAYPAGAGFQPINEVEIPTAPQ
>NZ_CP012159.1|WP_050431792.1|5194931_5196242_-|thymidine-phosphorylase
METLVELIARKRDGGRLKEEQIARLIRAYVDGDLADYQMSAWLMSVFLRGMEEDEIVALTRAMLHSGDVIDLSSVPGIKVDKHSTGGVGDKVSICLAPLVAACGVPVPMVSGRGLGHSGGTLDKLEAIAGFDVRLDVEAFTRTVREVGTCMIGQTDRIAPADRRMYALRDVTATVESIPLIVASILSKKLAEGIDALVLDVKVGRGAFMKTEADARALAKALVRVGTLAGKRVTALLTDMNAPLGHTVGNALETREAIEVLHGRGPRDLVACTLALGEEMLVAGGVAPTAAEARPHLERAITSGAAAEVLRRMIEAQRGDPKVVDHPDRLPEAPEKLEITAEQDGYVVAIDPLEIGLSAVALGAGRTRADQKVDPAVGLTLLAPMGTRVTRGQPLCHIHARRRTDGEGIQERVKAAFQLGPSPAPDSPLVIDRIDA
>NZ_CP012159.1|WP_050431799.1|5219417_5220794_+|WYL-domain-containing-protein
MPRASRTGHASARAPSPATKKSRPGGAFSSSSTSPPRPRTSSSPPSRDGVRAGAAGTAKARTSAAPAARTQGSVSGPASQRFAPSAAEDDDLDPDSSSSPFDDGGAKRAVRGRPRGPFTQHRRLDALRSLLQKHPAGLTIYDLARELDVTPRSLRRYLAEVRRELDLISAPVRPGGPRLWRLSPSEAPRRVEMRRTQAYALLAARRLFEPMRGSTLFEEIDLATQRLLGVARRPGRGANAGVADARLEERFLYLPFAPKDYASKTEELDDLFQAVADLRPLRCRYRRAKGSEERVTIHPYALVLYKDAIYCVGLHAQKGELRTFLLDRMRDTECAVTERFDLPEDFSIDDHFQGQFGIWRGGEPRRVIIDFDERVTEFVRTRNVHPSQKITSLPGGGVRLTMEIGDTTELTTWVLGFGETARVVEPPDLVERVKKELRGALALYEAAPVSAPIREEAN
>NZ_CP012159.1|WP_050431800.1|5220944_5222360_-|KamA-family-radical-SAM-protein
MTATTPTPLIELGTKPSGIVPLKPPVDPATLRHKNFIDAPDWRRIPAYADVTEEQFLDHKWQSKKSITRPDKLLDALRSLVSEEFIRDATEGFQRAPMSLRVSPYMLSLIDWNDPYDDPLRIQFIPLASRLLPDHPKLGLDSLHERADAPVPGLTHRYPDKALFLPLDTCPVYCRFCTRSYAVGIDTEEVEKTHFRVDEARWKQAFEYIASRPELEDIVVSGGDAYNLRPEQITLILTTLLEMPNIQRIRVATKGPAVMPQKILTDDEWVDAVTRGVDLGRKLHKEVVLHTHFNNPNEITGITRDAMNRLFERGITIRNQSVLQRGVNDTPETMKLLVKRLGQIHVHPYYVYVHDLVQGVEDLRTTLETGLMLEKHVRGTTAGFNTPTFVVDAPGGGGKRDAHSYEFYDRETGISIYQAPSVKPGQRYIYFDPIDLLPPEGQARWADPSQHQVMIDDALSRVREPGRGRPD
>NZ_CP012159.1|WP_082363474.1|5222592_5223162_-|lytic-transglycosylase-domain-containing-protein
MYTDADGVTHFSNRAGADPKFKLYLKSQERRGTSRNGITPTLPSDRSLDRFTRYDAWIRQAGTLYQIPEELIRAVIKVESDYDPRAVSPAGAQGLMQLMPPTALRMQVRDAFDPREAIFGGTRYLRVLANVFNGDLDLTIAGYNAGEGAVLRYNGIPPYQETQTYVTRVRTYYARYRANRDATAASTEP
>NZ_CP012159.1|WP_050431801.1|5223553_5225617_-|hypothetical-protein
MLTNDWVEFIKNVLSPSAFNEVALATLRALYGTPVLLADGTGDGGADAWIEFQAGRKPVQLHSGLKEAWDVKLSGALDRYELLRTSGRLFFVCAQTPAAPEPKLAQLEMKYGVVIKFYDARSIASLAAEPDRYPEVYAVLARIIGASAARATPRPWSPSVDARLAFTFFHENSGDFRAEVARSVLAACLYRTSTPISVDALLSHAVDAAGIGTSVRRLFRRELDTLAAEGLVEVREAEVAATRTLAARTKAALDIQAAAAERLREDCIEALEGRIHDAERRRSAVDDVFDDLGLLVREVPPSALTGRTSEELTRRLDRVERRLADHLMPRGGTSSEALKELVDVVSASPYGKALGAAELFIQMTSRESDELATALTHGNDLTIWLDASVALPMLCGMFDRVAHGWTTSESAVELHQALRKRGIMAVIPSVYIEEMAAHLLEAARRYRSFIGVDEDLARSENFYVAHFHAVAQRRSEPATLVRFDEFLQDLGLPHDWESDRWSQEPRRLRRVVEQSLETLAKRYEIGSQRIVSTEAVALQDEPRRSDIVLRHDRCVARELEEKVGSAGGGVLLCSEDQWFIGVLAAKQLLALHPAALLDVVQIVRPRDEPRRLASMRELAATFSERALSRGAAVWDLLAQLEAPQLSDRELLRRAKDFKSAWLRRTNRETLPRAADWQRFKVTGSFDA
>NZ_CP012159.1|WP_050431802.1|5227150_5227528_+|hypothetical-protein
MARKSPISIVKEKFGEKSKLVEALKQLTGDALWLDRTNADRGGAKSLEHVSNAKLLRLHATFSEVKEKFGSRAKLVDAILETEKRAKDAGYRKRLEAWPVPRLYDHYKSAAKRAKAAAAKTPAQA
>NZ_CP012159.1|WP_082362616.1|5227810_5229742_+|biosynthetic-arginine-decarboxylase
MSSTQKQEPNAWTTDDAKDLYMIDRWGRGYFDVSPDGNITVAPLQERGSKISIADVVRAAREEGLRAPLLIRFQDLLHHRVRTLNEAFNRAIAEVKYRGLYRGVFPIKVNQLKEVVEEILEAGKAYHYGLEVGSKPELFAGLSVHTDNESLIVCNGYKDENFIRTAMLGRKLGKKVILVAEKLSEVRTIARVAKEMNVEPLVGLRVRLMTEGAGKWAASGGEHAKFGLSTAEILAACNILSEAGMSSAFKLLHFHIGSQVPDILIVKRAVREATRHYAKLRKMGHKIEYMDVGGGLAIDYDGSRSTFHSSMNYSVEEYARDIVHNIADICDDEKVPHPNIVSESGRAIVAHHSVLVVQAFGSIEKTPSTPIDIQAEEHKLIQALLETRDNLTAANLAESWHDILQVKEESQKMFELGLLNLDVKARVETLYWENAEKMALLAGSLDQQEAPEDVVQLRTQLADQYICNFSVFQSLLDHWALGSLFPVVPIHRLNERPGSDSTLVDITCDSEGKVSKFIDLSDVRDTLPLHVLQGEEPYYLGIFLTGAYQDIMGDIHNLFGRVNEVHVFLDSDEDCGYYIEEMIAGNQIREVLGLTQYDTPGLIQRVKAQVDGAIKQDLMKPTEGMRLLADYERGLKDQTYLSF
>NZ_CP012159.1|WP_050431803.1|5230055_5230742_+|heme-exporter-protein-CcmB
MKRPGWLQQALFVAGKDLSIELATGEIITTSGFFAVLVAVIASLAFFAGQGAAEQVAPGVIWVSVTFASVLALSRTWQREREDGALLGLLVMPIQRSAIFAGKAIGVFVFVAAVEIIVIPVSALLFSVDLRLVGGGIALFCLAATPGIAASGTLFGAMTVRTRARDLVLASVLFPLLAPTMLAAVAGTRELFGGASIGELTDYLVLMGVFDVVFVAGGVGMFELLIEG
>NZ_CP012159.1|WP_050431804.1|5230778_5232065_-|(2Fe-2S)-binding-protein
MFRRTRALRDPVTVQIDGDPVPAERGEPLAVALLASDNVRLARSPKLHRPRGPSCLRGACDGCLARVDGVPNVMTCARPARGGEQIETQNVIGSRNADLLRVTDWFFPSGLDHHHLMAGIPGLQDVMQSFAQKIAGLGRLPNEPLKPRPARRLDVDAAIVGGGPAGVAVASRLAANGRTVALVHDGLALCEDLRGARATTPKAPHRAAELLAAHPLKGVQQLLRHVAAGVYDGELLAASDEGAVLLRARATVFATGAHDGMLAFPNNDLPGVLSARALCRLLASGLEPTGPVVLAGEGFWAEEAAIRLGKRLAMRVPLPSLLGVRGSSEVSAVFIKEGDPPKRRTVKAVALALAAPGAPAFEVAAQAGASLTYLADKGYAVTTDPRGRAADGVWAVGECTGAPFDLAALLESARVAVDDILDATRAPA
>NZ_CP012159.1|WP_050431805.1|5232158_5232770_+|hypothetical-protein
MRLGILGPAQGDLPALARAAQRLLDEAHADKVLYISDDDALDQVVAGWARGLVGADPSEASLFARASRCAEAGSEAIDAFVVSESARLRLRVLASLPPGQRTIEILDGRVVLFVFDKATLDEEDILPASVLVVGKSPTPFIRKAGARTFLAPGPIGSQDGGAALLDDGGGGMRIEVMNLRGAVTAREVVGAPHQSAKMRVQGG
>NZ_CP012159.1|WP_063796601.1|5232811_5233405_+|nicotinate-(nicotinamide)-nucleotide-adenylyltransferase
MGAARRVAIFGGSFNPPHVSHVLAVTYALSVAPVDAVVVVPVFQHPFAKELVPYEDRLEMCRLALGWIPSVEVSTVERELGGESLTLRTLEHLAAVHPGWSMRLLVGADVLPDLPKWHRFDRIAELAPPLVLGRAGIGSEGGAAHGLSAPEAVLPEVSSTEVRRALAAGDLEAVRWQVPRVVLEYALERGLYGVGRG

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Crispr_ID: NZ_CP012159_21

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012159_21

5382244-5382400

Orphan

Consensus_repeat	Method
CGACGTGATGTCGTCCTCGGGACGCGAAGGCAGCGAAGATGACGGATGAGGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP012159_21

>merge|NZ_CP012159|21|5382244-5382400|CRISPRCasFinder
CGACGTGATGTCGTCCTCGGGACGCGAAGGCAGCGAAGATGACGGATGAGGCACCGTGAAAGACGACGCGATGTCGTCCTCGGGACGCCAGGCGTCCGTGAAAGACGACGCGATGTCGTCCTCGGGACGCGAAGGCAGCGAAGATGACGGATGAGGC

>NZ_CP012159|21|19|5382244-5382400|CRISPRCasFinder
CGACGTGATGTCGTCCTCGGGACGCGAAGGCAGCGAAGATGACGGATGAGGC	ACCGTGAAAGACGACGCGATGTCGTCCTCGGGACGCCAGGCGTCCGTGAAAGA
CGACGCGATGTCGTCCTCGGGACGCGAAGGCAGCGAAGATGACGGATGAGGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012159.1\|WP_050431877.1\|5377472_5378447_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050431878.1\|5378506_5378971_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050431876.1\|5376353_5377430_-\|teichoic-acid-biosynthesis-protein	unknown	unknown	gnl\|CDD\|372626
NZ_CP012159.1\|WP_050431889.1\|5400922_5404063_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|275366
NZ_CP012159.1\|WP_156339327.1\|5374926_5375451_+\|polysaccharide-biosynthesis/export-family-protein	unknown	unknown	gnl\|CDD\|132072
NZ_CP012159.1\|WP_082362631.1\|5389094_5389775_-\|OmpH-family-outer-membrane-protein	unknown	unknown	gnl\|CDD\|214922
NZ_CP012159.1\|WP_156338736.1\|5379346_5380420_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|275319
NZ_CP012159.1\|WP_050431886.1\|5393926_5394886_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_082363479.1\|5395041_5396211_-\|serine/threonine-protein-phosphatase	unknown	unknown	gnl\|CDD\|223704
NZ_CP012159.1\|WP_050431872.1\|5369976_5372688_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|349772
NZ_CP012159.1\|WP_050431883.1\|5384534_5386523_+\|CBS-domain-containing-protein	unknown	unknown	gnl\|CDD\|341361
NZ_CP012159.1\|WP_169796598.1\|5396412_5398941_-\|protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP012159.1\|WP_050431880.1\|5380573_5381770_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050431882.1\|5382689_5384147_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366020
NZ_CP012159.1\|WP_050431871.1\|5368916_5369909_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050431885.1\|5389861_5393824_-\|protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP012159.1\|WP_050431873.1\|5372934_5374590_-\|O-antigen-ligase-family-protein	unknown	unknown	gnl\|CDD\|377422
NZ_CP012159.1\|WP_050431884.1\|5386633_5389060_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|143478
NZ_CP012159.1\|WP_050431888.1\|5399201_5400926_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050431875.1\|5375581_5376346_+\|serine/threonine-protein-phosphatase	unknown	unknown	gnl\|CDD\|223704

Protein	Function_ID	Function_description	E-value
NZ_CP012159.1\|WP_050431876.1\|5376353_5377430_-\|teichoic-acid-biosynthesis-protein	gnl\|CDD\|372626	pfam13528, Glyco_trans_1_3, Glycosyl transferase family 1.	3.19932e-175
NZ_CP012159.1\|WP_050431889.1\|5400922_5404063_+\|hypothetical-protein	gnl\|CDD\|275366	sd00002, TSP3, Calcium-binding Thrombospondin type 3 (TSP3) repeat. TSP3 repeats of the vertebrate thrombospondin (TSP)-1,-2,-3,-4 and TSP-5/also known as COMP (cartilage oligomeric matrix protein), and related proteins. These short aspartate-rich repeats are a continuous series of calcium binding sites that can be divided into two sequence motifs: N-type and C-type. N-type and C-type motifs are distinguished by their sequence length, calcium ion binding, and their interactions with water molecules. C-type motifs are higher affinity binding sites compared to N-type motifs.	8.3422e-11
NZ_CP012159.1\|WP_156339327.1\|5374926_5375451_+\|polysaccharide-biosynthesis/export-family-protein	gnl\|CDD\|132072	TIGR03027, pepcterm_export, putative polysaccharide export protein, PEP-CTERM sytem-associated. This protein family belongs to the larger set of polysaccharide biosynthesis/export proteins described by pfam02563. Members of this family are variable in either containing of lacking a 78-residue insert, but appear to fall within a single clade, nevertheless, where the regions in which the gene is found encode components of the PEP-CTERM/EpsH proposed exosortase protein sorting system. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides].	1.65391e-36
NZ_CP012159.1\|WP_082362631.1\|5389094_5389775_-\|OmpH-family-outer-membrane-protein	gnl\|CDD\|214922	smart00935, OmpH, Outer membrane protein (OmpH-like). This family includes outer membrane proteins such as OmpH among others. Skp (OmpH) has been characterized as a molecular chaperone that interacts with unfolded proteins as they emerge in the periplasm from the Sec translocation machinery.	6.52888e-25
NZ_CP012159.1\|WP_156338736.1\|5379346_5380420_+\|hypothetical-protein	gnl\|CDD\|275319	TIGR04526, predic_Ig_block, putative immunoglobulin-blocking virulence protein. Members of this family are putative virulence proteins of Mycoplasma and Ureaplasma species. Members share a region of sequence similarity (see TIGR04524) with protein M, a Mycoplasma genitalium protein that binds a conserved light chain region of IgG and blocks its protective function of antigen-specific binding. The seed alignment for this model includes an N-terminal signal-anchor domain and a proline-rich linker domain, and a C-terminal extension, in addition to the protein M-like domain recognized by TIGR04524. [Cellular processes, Pathogenesis].	0.00246003
NZ_CP012159.1\|WP_082363479.1\|5395041_5396211_-\|serine/threonine-protein-phosphatase	gnl\|CDD\|223704	COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms].	1.97694e-65
NZ_CP012159.1\|WP_050431872.1\|5369976_5372688_-\|hypothetical-protein	gnl\|CDD\|349772	cd05387, BY-kinase, bacterial tyrosine-kinase. Bacterial tyrosine (BY)-kinases catalyze the autophosphorylation on a C-terminal tyrosine cluster and also phosphorylate endogenous protein substrates by using ATP as phosphoryl donor. Besides their capacity to function as tyrosine kinase, most of these proteins are also involved in the production and transport of exopolysaccharides. BY-kinases are involved in a number of physiological processes ranging from stress resistance to pathogenicity.	8.60618e-30
NZ_CP012159.1\|WP_050431883.1\|5384534_5386523_+\|CBS-domain-containing-protein	gnl\|CDD\|341361	cd04584, CBS_pair_AcuB_like, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the ACT domain. The putative Acetoin Utilization Protein (Acub) from Vibrio Cholerae contains a CBS pair domain. The acetoin utilization protein plays a role in growth and sporulation on acetoin or butanediol for use as a carbon source. Acetoin is an important physiological metabolite excreted by many microorganisms. It is used as an external energy store by a number of fermentive bacteria. Acetoin is produced by the decarboxylation of alpha-acetolactate. Once superior carbon sources are exhausted, and the culture enters stationary phase, acetoin can be utilised in order to maintain the culture density. The conversion of acetoin into acetyl-CoA or 2,3-butanediol is catalysed by the acetoin dehydrogenase complex and acetoin reductase/2,3-butanediol dehydrogenase, respectively. Acetoin utilization proteins, acetylpolyamine amidohydrolases, and histone deacetylases are members of an ancient protein superfamily.This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in the acetoin utilization proteins in bacteria. Acetoin is a product of fermentative metabolism in many prokaryotic and eukaryotic microorganisms. They produce acetoin as an external carbon storage compound and then later reuse it as a carbon and energy source during their stationary phase and sporulation. In addition these CBS domains are associated with a downstream ACT (aspartate kinase/chorismate mutase/TyrA) domain, which is linked to a wide range of metabolic enzymes that are regulated by amino acid concentration. Pairs of ACT domains bind specifically to a particular amino acid leading to regulation of the linked enzyme. The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic generalized epilepsy, hypercalciuric nephrolithiasis, and classic Bartter syndrome (CLC chloride channel family members), Wolff-Parkinson-White syndrome (gamma 2 subunit of AMP-activated protein kinase), retinitis pigmentosa (IMP dehydrogenase-1), and homocystinuria (cystathionine beta-synthase).	4.46912e-38
NZ_CP012159.1\|WP_169796598.1\|5396412_5398941_-\|protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	7.40313e-43
NZ_CP012159.1\|WP_050431882.1\|5382689_5384147_-\|hypothetical-protein	gnl\|CDD\|366020	pfam00314, Thaumatin, Thaumatin family.	0.00013877
NZ_CP012159.1\|WP_050431875.1\|5375581_5376346_+\|serine/threonine-protein-phosphatase	gnl\|CDD\|223704	COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms].	5.58844e-67
NZ_CP012159.1\|WP_050431873.1\|5372934_5374590_-\|O-antigen-ligase-family-protein	gnl\|CDD\|377422	pfam04932, Wzy_C, O-Antigen ligase. This group of bacterial proteins is involved in the synthesis of O-antigen, a lipopolysaccharide found in the outer membrane in gram-negative bacteria. This family includes O-antigen ligases such as E. coli RfaL.	1.2303e-09
NZ_CP012159.1\|WP_050431884.1\|5386633_5389060_+\|hypothetical-protein	gnl\|CDD\|143478	cd07562, Peptidase_S41_TRI, Tricorn protease; serine protease family S41. The tricorn protease (TRI), a member of the S41 peptidase family and named for its tricorn-like shape, exists only in some archaea and eubacteria. It has been shown to act as a carboxypeptidase, involved in the degradation of proteasomal products to preferentially yield di- and tripeptides, with subsequent and final degradations to free amino acid residues by tricorn interacting factors, F1, F2 and F3. Tricorn is a hexameric D3-symmetric protease of 720kD, and can self-associate further into a giant icosahedral capsid structure containing twenty copies of the complex. Each tricorn peptidase monomer consists of five structural domains: a six-bladed beta-propeller and a seven-bladed beta-propeller that limit access to the active site, the two domains (C1 and C2) that carry the active site residues, and a PDZ-like domain (proposed to be important for substrate recognition) between the C1 and C2 domains. The active site tetrad residues are distributed between the C1 and C2 domains, with serine and histidine on C1 and serine and glutamate on C2.	7.23112e-20
NZ_CP012159.1\|WP_050431885.1\|5389861_5393824_-\|protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	4.05025e-80

>NZ_CP012159.1|WP_050431880.1|5380573_5381770_-|hypothetical-protein
MSVLLRTHRARFVVLMGLGAAAALVAPAGCLFPDYSFDLPEPSGGTGASGGGTNPTTGSHSEDCTNGVDDDNDGLADCADPKCVEVSCVPTVPTGWTGYVALYDGAPAGDPGCPSNFPGQAYVGTDGITAPAAVCQCSCSAPSWTPGCAALETITISTGDAPCADEAYCIGAVTVPPGWNGTCFNETGFSGGQLTCGPNTNQTCSMATGDPCSVSVRATAIAATGSGTCQPQLAPVNRPDPLWDRLGRACGDAPVTGAGCNIGQACMPRPEAPYESGLCISQEGNVACPPGAFTQKHVFYGSVEDTRGCADDCACGPGANGTCPATVSIYSDQTLGVCSTVVASFTAGTCMNVANNPAIRGRTVSAPGAPTGGSCTSTGGTPTGTAQPINPTTFCCIP
>NZ_CP012159.1|WP_156338736.1|5379346_5380420_+|hypothetical-protein
MPGRSRSVGIGIATFALGVTLGASPASAQTQEELDRARVEFRQGVALMAANNCAAALAKFQEVARVKRTPQVLFNIGECEERVGKLVSSLGNYRLAAAAAEGDKKAQDVTNRVGDRIAALEERIPKLNVRRGTGAETAAIYLDGVEIGQSESTAEIPVDPGTHVVAARVGDKEAFRETVSMEERSAKTVDVTIEVPEPEPAAVEPEPVKPPPPPPPPKGSKVPGIVVLSAGVASTVVGAVFLGLRGGALSDLDKVCNSDNACPPSAESTADSGRLYTGLAQVTLPLGVVGIAAGIVMLVTSGKGGDAAPSEETTSGEASSEARRRGPRRAAYSTWSPSLVPAASGANVGGLSVRMQF
>NZ_CP012159.1|WP_050431878.1|5378506_5378971_-|hypothetical-protein
MQLLATAYCTIEHDLSRSLVRLTRNAVPYRTIEELDGEIAVIGTVLDGVKGQWRLLVDLRSVPLRNDPAFEAASARLRDRMFRHASRIALVVKTAVGALQVKRHVREDHVDAEVFDDERLAMNYLLRPPSVGTSRRRSYMPTSGYVLVQQGRRF
>NZ_CP012159.1|WP_050431877.1|5377472_5378447_+|hypothetical-protein
MNRRRIWSELLPLAEVGSPPVLRLLARYGLDLAIAVRPDTLPELPALCRAAASAGVPVAVWPMLDDAAGRWASGATITPYRAFIEELLATLTREDLTPAEIIVDLEPPIGHVQRALDDPRGLWSLLRSRAGDDGTSAVAAFRALVETLDARGIVASAAIVPFLLRDGSWERTLGTPVTGVGFRGIHAMLYTSMIEGWSRGLLRRADVLALLALLCRAARLRFGDAVGASLGVVGVGALGDEPTYRDPEELRQDAAIARAAGIDDLALFDLAGVLSRPPPEAWLDAFVDASPHATPAPTLRAHGALAALDCLQLLSRLRPFSRTR
>NZ_CP012159.1|WP_050431876.1|5376353_5377430_-|teichoic-acid-biosynthesis-protein
MKILYGVVGEGMGHAMRSRVVLEHLLGEGHEIEIMASGRATEFLSKRFEGVNRIHGLHMIYEENRVRRGKTLWSNALAGTSGLPKNIAAYFELIKDYKPEVVISDFESWTYLYAKAHRLPIVSIDNMQIINRCSHDPAVIEGHQSDFKVTKAFVKGKLPFCDHYLISTFFYPPVRKDRTTLVPPILRPEILSARRRAGEHLLVYQTAEGYGRLLETLAQSGVECRIYGMRRGLTEEQVEGNLRFRPFSEEGFIDDLASCRGVIAGGGFTLMGEAVYLHKPMLAVPLGRQFEQVLNARYLEREGFGQYAMALDDPAVIQRFLAALPGCEEKLASYAQDGNRALLGELDTLLDRASAGIL
>NZ_CP012159.1|WP_050431875.1|5375581_5376346_+|serine/threonine-protein-phosphatase
MRAIAAGLSDIGRARLHNEDRFLLLPEYSVFLVADGMGGHRSGEVASRIAASTVASYFRGNHAPPDERPGARLTAAVVEANARIFARAGDSRAHRGMGTTVVAAAFAPEEQTLHVVHAGDSRCYLLRQHHLKQLTRDHSLLEDALRERPDLSPRDLAYLPRNVITRALGISATVDADACAEPTRPGDVFVLCSDGLHGFIDETDITRILDDQPVLTEACAHLVALANERGGRDNITVVLIRIEDGGAPWTPAAP
>NZ_CP012159.1|WP_156339327.1|5374926_5375451_+|polysaccharide-biosynthesis/export-family-protein
MPKFDYDAERKATSKYSIGPGDILEVRAWNNDALSARATVRPDGYITVPLVGEVLAAGRTAIDIANEVANRAEKYYTQKPVVSVEVAELHSYRVYVVGEVARPGEFTPTAQVTVLQAIALAGGFSRFADPDDIVIVRRDSFGERRIPFPYSRVVEDGQLRANLPLQSNDTVVVP
>NZ_CP012159.1|WP_050431873.1|5372934_5374590_-|O-antigen-ligase-family-protein
MAAWVVCALCALVILKPQEFIPALAGLPLLYIAFAAAAVLVVFDVCWRRVRPALSPQIPFALAFFAWALLTTAIKVPDTLSERVAFFVTGVGVLLAVGIGSASSMGLKAFAVTFLACGVLVTGVALVQGRGPLQCMTPVDDEDWMGTGELRSDGRSCAVDDDCYERAPNPEASYRCERQGPLGTSTVRGRVRYRGSLADPNELALMVGMTIPFAFALADRGRRRRAREDGVLEEAPPPQEGSPGDASQGNDAEALKTGAADEAQVTRASSPGTGSEVEGRASRPRWSEPGSGGGVMMGAAVPLPLLLTDRLLHRVGTGLRALPVIALLIAIAVMVVMTKSRTGVIVFLVVLGLYFVKRAGAWGVVLGLLVGPPMLLLGGRSGSEAEESSGERMELLREGLEMIRHTKGIGVGAGQFGYETTIGLTAHNAYLLAAAEVGLVGACLFGLTLYSAVKVPLVIWFGDYEVDSVVERFAPAVFVSLCGGFAGIFFLSWSYKDVLYMAIGASAALYGAAKAQDERVSVRISLLEVVLVCGGMMALLVAIYVGLRVFR
>NZ_CP012159.1|WP_050431872.1|5369976_5372688_-|hypothetical-protein
MAFLSTDSTPRERLSRLLSLLRRVRMYWRSTAIIVALGVTVSLVFALTTKRVWRSETTLLYRETIQTGQPAGTRTARLGPKLKDMIYARPKLSSVIEEFGLYPEKTARSMVEAVGEMQTNLGFRSRDSDSYVISFSHHDPMVAQQVTARLADLIIEDYQRENMTSAKMTLDFRKRELEGASKQVEEASRLLATFLADHPQFQWGLGDSPYAPTPQAQGGPVHAPVARPQAPAVPRIVDPELLSLERRMAQVDAKLNPPQAAPAGEAAPPANVAEAQKMRDAAAAAVSAAEAGLADKLRVVTELHPDAVLAKGRLETARRELAHAESALRAARGGVRPPSDAPSSLSAEERAPLERERASLFQQIAARRNRLQADRQGTAAAPAKTPAKPAAAAAEGTQEPVVPEVVQLETEWHRLRLNLDRARDYLKTSQANERAANMVAEAVESKGETEMAILDPAYLPSRPDKGRGRVFFVGVALSLMFALGLAGARVLLNDTIYDEADVGALGGLPVLAAMPAIPAVEPPRVRAMVPVQEPPTAASMDEYEDYDYEDADTQVVTPPPPPRDQRLHTQTLRWGSPLEMEEMRREAAAQVAAARAQAAQIAEDAQARAAQAAAQAAQVAQMQAPLARVAPDPLARVVAPFGGGRETLNDPEVQEIGDDPAEEGEDALRLLRDVPQHALASLRVLRHRMERYRGEGRMIVSVLSPGPGEGKTTLAARLAMTLAEAERARVILVDGNLARPRVASTLGLKLPGYAGLSYQIRQRMLGHRRSPTGDEGRGNGLAPLGVVRIGPSLWVLAEPALGETYPDVVNSPHFGAALQSLRRCFDYVIIDGPAVLGSGDANVLEDAADGIVLVARASMTRGQSLTRAIAQLGDRRLLGVVLNDVSERPVARKKVEMTQGATA
>NZ_CP012159.1|WP_050431871.1|5368916_5369909_-|hypothetical-protein
MRVSSWISVAVITAAAVVVLPSGCTQDFSRFDSDPEQVCGATEKRCGGGCVAKLDVRYGCGEGCSPCDLANADATCSPEGACIVRLCESGFADCDNDDANGCETSLLSARNCGACGNDCGVAECEAGVCGAVTCPEGRADCDEDASNGCEQSIGVTQHCGACDRACSREHADDVACVAGECVPECDFGYDDCHQPGLDEEDDGCETRTASDVDNCGECGRRCSDLRVAARSCANRVCNSTCTPGFANCTRPTSGQDDGCETSITTTQNCGSCGNVCPMAFTCSQGQCRCSTDASCDNDTPGSAVCMMGRCMCDGMLCNFGQRCGQDGQCG
>NZ_CP012159.1|WP_050431882.1|5382689_5384147_-|hypothetical-protein
MRLLPAVFAAVSTAGFAVLLSAGCSGDDPSTAGAGGSGASSGIGGSMATTAPGTGGIGGTGGDGGSGGNSGSRGPAYEAGTADCPPEDGTRRIKLVNNCTSARWFKLDGRTTPTWARPTDCPWNGAACTDLEGVGQCSAIAQGMSGGVNPGPVYCKATGVGAQGACACNPYFEIAPGEEHTIDMPASAPFASGTGWLATGCNAFGDGCTLGNDAAKNSTFEFTYDPPGQGTLWYDISAVNAWTTASAIGMKSCGGGSDPDPDNVFWCRGTGCRFDVNDQCPDGTAAFDPAPAGCGTCPTMVVNGKQVIVGSCGTCPDGASANRIPTGTVFNANNIGGNEWTWTGSPEFARTFGHDEGVHANRRYDCGPGGCTAAAAGQANTCLGGCDLCTVSQNVSAGDNACLKYCCPDSTHTYNGATYRYDSAGCTALGVQAGTDYSPAVKGECPYVYTFGYEDHSSTFRCTTSASLLLQACPDPTDFPSSFEP
>NZ_CP012159.1|WP_050431883.1|5384534_5386523_+|CBS-domain-containing-protein
MGEQKIAEGTDEQQQQVFVKALLSDILALEQMLEGDRIEANVRRIGAEQEMFLVDRSFGPAPIAEALLERVEDPRLTTEIGRFNLEANLSPLAFRGDCFRRLEAEMKELCGLASKAAHELEAEVLLTGILPTLRIGDLGIENLTQRPRYQALNSALCKLRGSDFHLRIEGLDELEATHDNVMFESCNTSFQVHLQVGAKEFAPLYNLAQAVTGPVLAAAVNSPVLLGRRLWHETRIALFARSIDLRPAEQAQRAQQPRAQFGERWVDESVLEIFREDIARFRVVVISDAEEDPREVLARGEAPALRALRIHNGTVYRWNRPCYGVGDGVPHLRIENRVLPSGPTLLDEVANAAFFLGLMAGLSREFPRVDRRMAFADAKMNFFAAARHGLKAQFTWMDGKSFTAPALILEELLPRAREGLRAEGVDAADVDHYLGVLEERVRSGQTGAQWALSSLAAMEREGKGMQDAQDRALCAAMLEQQQRGAPVHDWPLARVPDDPVALVESYRTVAQIMTTDLFTLRPDDIVDLAASVMDWRHMRHVPVEEDGRLVGVVSYRDLVRLVASGLPDRAEKAAEVGAPSSTPKPVTVASIMHVEPVHATPEMPTLSAMQLMREHGIGCLPVVDGGRLVGIVTEADLLDVASRLLERALKEASSSLERSSRP
>NZ_CP012159.1|WP_050431884.1|5386633_5389060_+|hypothetical-protein
MRCSLLGSLLVLHLASCAAPSGTSTPAPHAAEGVGLPPVTRSDADEGAIVPEVPPVTVPPSGPLDARVERLARLAKVWGEVRYLHPFLVERDIDWDAALLKAIPKVSAATTGEDEDAAVEEMLKALGDPATRLDRDGAWATSPDAVAPAFEARFRWEGKGKNVLWIDLGSVADDATMVAFALRAQDEIAKARAVIADMRPPAGQGYSFDGNELFEGLVGSLASREGAAPALREVEHHGYASQRGNMTPYQTSLVTRLPALYPFTSGPRPSRIVVLVDKHSSLPAGAVALQSLGDAEIVSDGVLQDEAIVSQISIERGDRPPVLLRISSLEAPLRADVALPEGQGARPAKAGAKDAMIEKALAMIASGKSASGGGRVKGATQEAKRQVTPARSIGWRRDAVYEDQPYPSRELRLLGLFRLWNVFERFFAYRSLMGDAWERALVEFIPRFEAAEDARAYTLTIAEMAARVPDGHVWMVGRPSAELFGVSLNAGIDVLRIEGRPVVVRLSGRVARGSGLAVGDVIVSVDGEDIDARAQRARRYEAASNPWAHAHYADRQALRGAPGSVATLGVEGEGGRRKEVKVPRYSVDDALVKPGPDSDALPYRLLDGGIGYVDLTWLEGNQVDAMFTALASAKGIVFDMRGYPHQTGWALGAGMNVKKAPTALFERPVVSAQAGRGRFLFEQRLPPAPLRFQGPSVMLVDERTQSQAEHIGLLFSAANGTRFVGSPTAGANGDITDMCMPGGTCVTFSGQGIRFGDGRQLQRIGLSPLVPVRPTIAGLRAGKDEVLARGVEVLRREIAARALQPATR
>NZ_CP012159.1|WP_082362631.1|5389094_5389775_-|OmpH-family-outer-membrane-protein
MHSPATRSTDSLTTRLFGRGRTAALAVALGLGAATLLAPESAAAQGKSAVIDVRRAMLETEEGLRVQATLRKIFDSRQVELDGKQRSLSEEQEKIEKEDRAGKTPKDQLARRRENLQRQAAEFQAVYVEAQREMQRKENELTTPILQKVLGVVRRLASQEGYEMIMEKSAVPYYRADLEITDRVIQMYNAGAAGDAAPAKPGATPPAAPKAPAKPAAPAAPAPKKP
>NZ_CP012159.1|WP_050431885.1|5389861_5393824_-|protein-kinase
MLPEFEPSDRFVIDARAGSGGMGDIYKGVDRETGTPVAIKLLRPIASDQERARFAREVAVLAELRHPNIVQYIAHGTWHDGRLFFAMEWLDGEDLGQRQRRAPLGMRDAVEVVRRSAAAMAAIHARGVVHRDLKLSNIFLLRGRGTAVKLIDFGVVKPQVPDEYPTERGTIIGTPHFMAPEQARGEPIDARADVYSLGSVLFRLITGRNVFETEHVIALLGRLVLEDPPRAQHVRFDVPEALDDLIARCIARDRNERFEDGGELSRALARVAAHVVDNDPPATDRSASAVRKATQVPESKPLSSTSDVGTPSRPGSSERRVVACVLYDLGGATISPDLDASLRDLLGDDARIETLASGQVVTLLGTERSRGDEAMRAARAGLTVARALPSARIAVAMGRATRGRQSLAGEALDRAARQLEATSPGTVRLDASARTALEGRFVIQEDTQGGVLLQEDPLGVGGRRLLGRPSPTVGRDHEITLLQGIYSDVLADRTPRAVLVTGAAGIGKSRVCSDIIQRLEASAQPPLVMLSRGDPMSRSASLSGFGRALRAMMGIHDGESHDVQVQKVTYHVSTRLPRPLRFLSAFLGEIVGVPFPDDGDEPLRAARASAQIMQSRMRMALEAYVRSQAERAPLLAVIDDLHWIDDTTLDLVDWLLGCTELPFVVFAFGRPESEARHPHLWERRNVTRLALPPLSPHAADRLVAAVLTGSTPAVRAARAAIVQRAGGNALFLEELVRSVAEGRDEIPMTVQALVQLRLDRLPTDAREVLRAASVFGHAFWTSGVEALLARPIDTELSALEASEIITRQPHARIAGQVEWMFSQTLVRDVVYASLLDEDRAALHLAAGTWLEAAGDVDAALIARHADAGGDLQRAAALYAQATHHALLHGAELVTALELAHRGLACGAEGVLRTQLLLDKAHAHAGMGQLSEGIQAAQEAAHLAPPDSELWGEAHRLAASTLIEAGRSAEGDAIATWAARPDIAPSLSPALRASLLAVRVRSLYDLDRPREALDVARHAVDIARASGAPVAVTRALDALLFAMPAGEVSDAIATGHSLIQAAEAAGDTAIATRARLNTASMLNQVGLFEDAQAMLMHALGDARDRRMRILEAAALHNLGMSHARVGKMDSGVEYERQAGLIADECHAARLRIHTRTYEIIFLIWRSAPGDLATALALSGRLQEETSRHPALQLGSWFALARVQLARQAYEAALPAAREAYQRLAAGPVEEWEEYTRLTLVESLLAVGLTTEADAVLDEAFRSLLDRAQRIHNPYQRSAFLRRNDEVDRLLQLARERLGRVLPPLDPVNDHRTPTMGPGTTT
>NZ_CP012159.1|WP_050431886.1|5393926_5394886_-|hypothetical-protein
MRRAATFLCGLSLLCTTAPAVAQNAAARTERVEPSAALVPVRLELRTSPDVLQCPGEKRLREEISVRLGHSPFDDAARTAVIVTIARRDHDLTGRVVYLDADRPLEAREFVVPDDPRGCFTLLEYLAVAIAFTLTPFGDDDLSRTPPGTTEAAPPGPARRTELRLGVGGQLSLGYATDPTLAALFHVQLRWPAHSLSLEGRFRPPAATYGDRGTPLELRSEGLAVSACVHESLFFACTAGEFGLLHLHNPERLEQGGRYAAVSVGLRAGVELFLSERFLLQLRADVATSVAPGPLRLDRDEWRNTPLSGGLGGALMTRF
>NZ_CP012159.1|WP_082363479.1|5395041_5396211_-|serine/threonine-protein-phosphatase
MKDRSRRNAAAGAQPTPPPSEAKDSGTRSDSLPKESAAPLSSGPASTSRGVTAPRRRSGPDYEDEEEIDHKDEDDDLTLITLTPPEVINSPISRPSSPSYGDEEEEAREEREIEQPSAVPIIYDDDAAIDEPTSSSPLVLISAVGQTHLGQKRRKNEDCYLCMDDYHLFAVADGMGGHKGGDVASRLAVETIQKAFEEANWTEEAPYPDVPRRGSELATAIQRANKTVYDASQVDRSLMGMGTTLISARFSPNKQRLYVGHVGDSRCYRLRDGELRQLTTDHTMGAAGITGPLANHLSRALGVASAVKIDLVIARPRPGDVYLLCSDGLSKMATDDAIQDVLVAQPDPEKAAAALIDRANEGGGRDNITVILVRVSDPKDLAQIVKRAS
>NZ_CP012159.1|WP_169796598.1|5396412_5398941_-|protein-kinase
MPPVLGAYQLGRRLGAGTMGVVHEAIDRRNGHRVALKTLERLDPAGLYRLKHEFRVAADLSHPNLVALHELVCDQGIWFFTMELVEGENFLEHLAAHRSDATRRAPSARRNGGPPDVHRTWQSGRLRALFSSPGVRGVRARNGLVRPVDPASDTNLQQSPRPRGPASRLDALRAALLQLVCAIDALHRAGKVHRDIKPANLLITPGGRLVVLDFGLTSATGERDGRNGEGTPGYMAPEQAHDATASPASDWYAVGGVLYHALTGQLPFAGSALDILSAKLAGEPRPPSAITQGVPPDLDALCVSLLRRVPAERPTAPELLHALLAHGSAPTSRTPCITHWAPCIDPAASQDTLTEPPDGLLIGRARALDELIDTYRTLEPGKPAWIHVRGPAGIGKTTLLRAFTHRVRCEASPLDPPSSPPLPSIPPAPPAPRALSPERTDPTLASLEDAPPMTVRTVRREPCAASWAPRGWRDPSGPASPPEKGPVVLSSRCHDREDFPFKLLDGIVDALSQLFGGPGTAALSPDAAHQERALDAARACTALQPAEACALLRVFPVLAHVAPLLERAGAAASAVFPRGPLADLQGASLKRKATTALRSLLCALTSRAPLLLLLDDLQWGDPQSAEMLREILRPPGAPTLLLITAHRTGLRRDPRDTEPPACTALAATLAVTTVIELGALSRHESRQLAQALLHEDRRVEGDQGCPAAVAQAERIALESGGCPRWLEALASHARHGGRPLLQEVIATRIEALPVEARKLLALVASAPAPLPRSAVLAAAGADASRTLQLLSSAGLIVLDAGPTGPLVRASHPRPCAQHLATAHPPTRALPCDSAPFTQLGEP
>NZ_CP012159.1|WP_050431888.1|5399201_5400926_+|hypothetical-protein
MSAGAAVALVVGTAAAGCFTVDAGNAPPRDSFYFPTGLAISPGGQALFVANSDFDLRYNGGTVQALALANEGGLRERALCIQGALSKFSPLPGESEEAAASFRSSCEALLQAGGARPLPCGNLGKNPNPVLYPGPCAPLGVEPFITRSAIIGAFASGAVLVHPPEGQGEGARLFIPVRGDPSVSFFDIEDDRSCAAEPGACDRPVRLDCGADGEGRCGADFRVGENPYESPRALRLPLEPVGLAAGATGNAIVTAHQTQTAASLILNSWTSKPVLTYVLSGLADGPTEVAALPTPGLAAACGDAISYQPGFLMTYRAAPVLDLLRYEADAGSAPPRGYLTRASRLNISVNTNGTDSRGIAVDDSERRTCEVACDAQWQACEPGCSGERLSCLAACTEIPVRFFVANRSPASLLVGQVRTVPVTFEGAPGESDRVCGPQRFTSAYEIMELQDSVALSYGASRVSLGHIIGKDGTPQLRVFAVAFDSRFIFSYDPAARRVDAIIRTGRGPHSIAFDTFAPTGEAGSGSQRRAHSFMYVAHFTDSYIGVVDLDARRPESFGSMVLTLGNPQSPQESQ
>NZ_CP012159.1|WP_050431889.1|5400922_5404063_+|hypothetical-protein
MIRRALALAIPIVAVGAALGPGCAQRSVNVNVRSLERSGRASFVCLAAPGESPALPLTACSRRVAADLDDFGVDEAGNTTLPHLYALVTQTTRGEIAVIDLTTNANPVLDQDPRVPGANFLHVGAQPVDIVSTTGGSATFVATAEIGREGIFVLPSTMIRPSAERPSQGLNSWPGCSLPSAPGEMLLAIDPAGPEGERGSCDVPYGSPYLSEEGEPVVPFQHGDLGPEGMGRQKLVVTLPDMGGFVVIDAQRLLDRTAGSYAACPVERWVPLKAELPPPGDPPSPPPMVACVNPEPVTPSTLPLGAPRPSGIALSGERLFLGDLEQPLIHTVDLRTPCAPVERPPLLTSSLVEPRRIVTTTRLGVSEAATVDFRRYLYAVDADEGSLMIFDVSDGATQRTPLVRPHAEWNPFAPPDRIQFNAPVRDVLLASRDLPVVDPETGVALAGMRCDSDPRLVVCRDASDAGCDLETLYRTSSTFDTGASPTKLRGTFALALLTNAQISVIDVDDLDAGCRGPKFFSRTLGCSAIGPSGFGPPENAPPGDMDADGVPDGEDNCPFHYNPDQADTFESEAGGTPDGIGDRCDGPNSGLASTNEASCNTVVRNTPRSLNYLYTSEETGLRGEPGLQLLPLLYDRAGTAQPDGDEQPQMRAPVPADGTTALALAVGNQRLSINTYLQNADGSPATYPRAGQIDGRNALLMNLEDPRAQVANQAWAVSYEGTLPGFGGNVGAVRCAAGCEGDASGKRWDLYDSAGLFCGRGVESAESVREQLEAAGESASDAEVRGLADFMEIASDLPDESNAHWTDPSRGVCTYDSCRAEFGLAASPTPRREFTIREAYEDHLVLDRPQLNDPSSDLNCCFPGSMTYRVRARGQWIASSQVTGFLHHVIADPETSVCRNSCDPTLARMNGRVRSATSSTPGCPLAEARPGDVVVCEGDPRLLVNPMFQLAITEGRRACGGDSECPGTPCEQGSCRVPPQRDMQFRFSTQGAFIPVQVNLASSTSDMQPQSLRFLPATGELAVTDGSLEGLLLINFGSLSISRQFY

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Crispr_ID: NZ_CP012159_22

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012159_22

5458118-5458238

Orphan

Consensus_repeat	Method
ACCCGACGGGCGAGCGCTCGCTTCCTCGAT	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP012159_22

>merge|NZ_CP012159|22|5458118-5458238|PILER-CR
ACCCGAGGGGCGAGCGCTCGCTTCCTCGATTGAAGTGTGGCCATCACCTGAGAAATGCTCGCTCGCTTCCTCGATTGCGGGTCTTGTCTCTACCCGACGGTCGAGCGCTCGCTTCCTCGAT

>NZ_CP012159|22|3|5458118-5458238|PILER-CR
ACCCGAGGGGCGAGCGCTCGCTTCCTCGAT	TGAAGTGTGGCCATCACCTGAGAAATGCT
CGCTCGCTTCCTCGATTGCGGGTCTTGTCT	CTACCCGACGGTCGAG
CGCTCGCTTCCTCGAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012159.1\|WP_156338738.1\|5444365_5446522_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|271322
NZ_CP012159.1\|WP_050431932.1\|5462378_5462633_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050431939.1\|5473831_5475130_-\|FHA-domain-containing-protein	unknown	unknown	gnl\|CDD\|225114
NZ_CP012159.1\|WP_050431925.1\|5453282_5454278_-\|diphosphomevalonate-decarboxylase	unknown	unknown	gnl\|CDD\|225941
NZ_CP012159.1\|WP_050431936.1\|5468569_5469373_+\|carbon-nitrogen-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|143587
NZ_CP012159.1\|WP_050431924.1\|5451399_5453226_-\|PQQ-binding-like-beta-propeller-repeat-protein	unknown	unknown	gnl\|CDD\|379140
NZ_CP012159.1\|WP_050431937.1\|5469380_5470565_-\|radical-SAM-family-heme-chaperone-HemW	unknown	unknown	gnl\|CDD\|223708
NZ_CP012159.1\|WP_050431921.1\|5448824_5449655_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050431919.1\|5447630_5448260_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050431927.1\|5455275_5456391_-\|polyprenyl-synthetase-family-protein	unknown	unknown	gnl\|CDD\|223220
NZ_CP012159.1\|WP_082362636.1\|5464488_5467305_+\|VCBS-repeat-containing-protein	unknown	unknown	gnl\|CDD\|379232
NZ_CP012159.1\|WP_050431920.1\|5448324_5448828_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050431933.1\|5462861_5464460_+\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP012159.1\|WP_050431922.1\|5449691_5450345_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378629
NZ_CP012159.1\|WP_156338740.1\|5458805_5460848_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050431926.1\|5454274_5455279_-\|mevalonate-kinase	unknown	unknown	gnl\|CDD\|224493
NZ_CP012159.1\|WP_156338741.1\|5467301_5468573_+\|PEGA-domain-containing-protein	unknown	unknown	gnl\|CDD\|285503
NZ_CP012159.1\|WP_050431938.1\|5470752_5472915_+\|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|223394
NZ_CP012159.1\|WP_050431923.1\|5450539_5451259_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_082362637.1\|5472946_5473453_-\|YkgJ-family-cysteine-cluster-protein	unknown	unknown	gnl\|CDD\|308985

Protein	Function_ID	Function_description	E-value
NZ_CP012159.1\|WP_156338738.1\|5444365_5446522_-\|hypothetical-protein	gnl\|CDD\|271322	cd14952, NHL_PKND_like, NHL repeat domain of the protein kinase PknD. PknD is a mycobacterial transmembrane protein with a cytosolic kinase domain and an extracellular sensor domain that contains NHL repeats. It plays a key role in the development of central nervous system tuberculosis, by mediating the invasion of host brain endothelia. The NHL (NCL-1, HT2A and LIN-41) repeat is found in multiple tandem copies, typically as 6 instances. It is about 40 residues long and resembles the WD repeat and other beta-propeller structures.	0.00578691
NZ_CP012159.1\|WP_050431939.1\|5473831_5475130_-\|FHA-domain-containing-protein	gnl\|CDD\|225114	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms].	5.04616e-20
NZ_CP012159.1\|WP_050431925.1\|5453282_5454278_-\|diphosphomevalonate-decarboxylase	gnl\|CDD\|225941	COG3407, MVD1, Mevalonate pyrophosphate decarboxylase [Lipid metabolism].	1.33324e-79
NZ_CP012159.1\|WP_050431936.1\|5468569_5469373_+\|carbon-nitrogen-hydrolase-family-protein	gnl\|CDD\|143587	cd07197, nitrilase, Nitrilase superfamily, including nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes. This superfamily (also known as the C-N hydrolase superfamily) contains hydrolases that break carbon-nitrogen bonds; it includes nitrilases, cyanide dihydratases, aliphatic amidases, N-terminal amidases, beta-ureidopropionases, biotinidases, pantotheinase, N-carbamyl-D-amino acid amidohydrolases, the glutaminase domain of glutamine-dependent NAD+ synthetase, apolipoprotein N-acyltransferases, and N-carbamoylputrescine amidohydrolases, among others. These enzymes depend on a Glu-Lys-Cys catalytic triad, and work through a thiol acylenzyme intermediate. Members of this superfamily generally form homomeric complexes, the basic building block of which is a homodimer. These oligomers include dimers, tetramers, hexamers, octamers, tetradecamers, octadecamers, as well as variable length helical arrangements and homo-oligomeric spirals. These proteins have roles in vitamin and co-enzyme metabolism, in detoxifying small molecules, in the synthesis of signaling molecules, and in the post-translational modification of proteins. They are used industrially, as biocatalysts in the fine chemical and pharmaceutical industry, in cyanide remediation, and in the treatment of toxic effluent. This superfamily has been classified previously in the literature, based on global and structure-based sequence analysis, into thirteen different enzyme classes (referred to as 1-13). This hierarchy includes those thirteen classes and a few additional subfamilies. A putative distant relative, the plasmid-borne TraB family, has not been included in the hierarchy.	1.31392e-48
NZ_CP012159.1\|WP_050431924.1\|5451399_5453226_-\|PQQ-binding-like-beta-propeller-repeat-protein	gnl\|CDD\|379140	pfam13360, PQQ_2, PQQ-like domain. This domain contains several repeats of the PQQ repeat.	9.88996e-06
NZ_CP012159.1\|WP_050431937.1\|5469380_5470565_-\|radical-SAM-family-heme-chaperone-HemW	gnl\|CDD\|223708	COG0635, HemN, Coproporphyrinogen III oxidase and related Fe-S oxidoreductases [Coenzyme metabolism].	7.10666e-112
NZ_CP012159.1\|WP_082362637.1\|5472946_5473453_-\|YkgJ-family-cysteine-cluster-protein	gnl\|CDD\|308985	pfam03692, CxxCxxCC, Putative zinc- or iron-chelating domain. This family of proteins contains 8 conserved cysteines. It has in the past been annotated as being one of the complex of proteins of the flagellar Fli complex. However this was due to a mis-annotation of the original Salmonella LT2 Genbank entry of 'fliB'. With all its conserved cysteines it is possibly a domain that chelates iron or zinc ions.	0.000518788
NZ_CP012159.1\|WP_156338741.1\|5467301_5468573_+\|PEGA-domain-containing-protein	gnl\|CDD\|285503	pfam08308, PEGA, PEGA domain. This domain is found in both archaea and bacteria and has similarity to S-layer (surface layer) proteins. It is named after the characteristic PEGA sequence motif found in this domain. The secondary structure of this domain is predicted to be beta-strands [Adindla et al. Comparative and Functional Genomics 2004; 5:2-16].	3.83096e-06
NZ_CP012159.1\|WP_082362636.1\|5464488_5467305_+\|VCBS-repeat-containing-protein	gnl\|CDD\|379232	pfam13517, VCBS, Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella. This domain of about 100 residues is found in multiple (up to 35) copies in long proteins from several species of Vibrio, Colwellia, Bradyrhizobium, and Shewanella (hence the name VCBS) and in smaller copy numbers in proteins from several other bacteria. The large protein size and repeat copy numbers, species distribution, and suggested activities of several member proteins suggests a role for this domain in adhesion (TIGR).	0.000147051
NZ_CP012159.1\|WP_050431933.1\|5462861_5464460_+\|serine/threonine-protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	3.26745e-100
NZ_CP012159.1\|WP_050431922.1\|5449691_5450345_-\|hypothetical-protein	gnl\|CDD\|378629	pfam11297, DUF3098, Protein of unknown function (DUF3098). This bacterial family of proteins has no known function.	0.00160918
NZ_CP012159.1\|WP_050431926.1\|5454274_5455279_-\|mevalonate-kinase	gnl\|CDD\|224493	COG1577, ERG12, Mevalonate kinase [Lipid metabolism].	4.60503e-67
NZ_CP012159.1\|WP_050431927.1\|5455275_5456391_-\|polyprenyl-synthetase-family-protein	gnl\|CDD\|223220	COG0142, IspA, Geranylgeranyl pyrophosphate synthase [Coenzyme metabolism].	1.21373e-53
NZ_CP012159.1\|WP_050431938.1\|5470752_5472915_+\|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase	gnl\|CDD\|223394	COG0317, SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription].	0

>NZ_CP012159.1|WP_050431927.1|5455275_5456391_-|polyprenyl-synthetase-family-protein
MPEHAAAATTEPTSGADRTLEGAHGAAARAFLDFLASIRPAVETRLEARWQREIDRIKGYGPEIEAMAAEARSLTLRGGKRYRAGLVVAAHLGVAPEAPLDAAYDTAAALELIQTYLLIQDDWIDEDDTRRGGPSVHAALGRSLKNERLGAVSALLASDLTWSLAVGLLAAAPADPSLVLATLRTFCETHQDVVVGQHLDVLGRAEDVEQMHALKTGSYTVRGPLLLGATLAGASGDVLAALERYAAPVGVAFQLRDDLLGTFGSEAETGKPVGNDLRNGKRTAVIAWIDGRLDASGQSILDRAFGKSEATPDEVAEATALLVTAGARTAVEDRLDALCTEAERLAAELPVSARAREILAGAAAALRWRQR
>NZ_CP012159.1|WP_050431926.1|5454274_5455279_-|mevalonate-kinase
MSPARGAACGKVILLGEHAVVHGTPAIASGIEHGAEATAEPSTDGRSTLLLGAAEHIAGDTGGDLCRAFGALLAELPGTPPLRVTAESRLLPGGGLGSSAALAVSIARAVRAFDGGVHAIDDARILAAASAWERVFHGNPSGIDTTAAALGGCFLYTRAEGASPLALRRDVWLAIGSTGTSGSTRLMVESVARLFERKPDVKDQTLPAITALVRNAALALEAGDLQGLGRLMVLNQMLLAGLLVSTEDLERMCNLARDAGALGAKLTGAGGGGSMIALLDAHDEDQAERAAARVLGAWRSAGYDGLLARISAQPRPASTGQPSPAAPPVTEDPE
>NZ_CP012159.1|WP_050431925.1|5453282_5454278_-|diphosphomevalonate-decarboxylase
MSITGKATAVAHPNIALAKYWGKRPFGHNLPAVPSLSVTLAGLATRTTVAFDDALAEDELHLGGHPAAAGPTRRVSGLLDRVRAASGRTERARVTSDNDFPTAAGLASSASAFAALALAASTAAGLSTSPEGISDLARRTSVSAARSAFGGFVALRSGAPGDETLPATPVAPADHWPLRVIIAVTAEGPKDVGSSEGMKLTVDTSPYYAAWVTDAPSLEERVRAAVLARDFQALGSAAEASALRMHASAIAAAPGLLYWTGATVNVLSEVRRLRARGIPAFFTIDAGPHVKVFTVPEAEDEVTTALAAVPGVLRTLSATPGPGAHVVDPAV
>NZ_CP012159.1|WP_050431924.1|5451399_5453226_-|PQQ-binding-like-beta-propeller-repeat-protein
MPLLPDADADRRAYDAARSAVLAGAEDPDVRFAGDPFSLSAWLRVRKLIEAVGDTARVLHHVGLDPARWADLERRWIGLLHQPSVRARHDLWSERLDVRTEAAQLLSSPGPVSRDALEPGATILTAPDSPTSASAPRRAWWALGYALRGAAPPALRAVDLATGQVVWEGLTSLCTWHSPPARGSYAARGRALFFAHETRIGLADLATGTLHWAASLPAPIAHDDEGRVALFDPLPEPPHATRGGPPSAANSAGVVLVRTQTPALIALDRESGNVRWQIPLGSSARLHEVTGLGVLVHARDVTGQWVSLLDPWTGAARWTIGGRLADATPQVEAVTVRGRHALLLLTEGTSTPPWPPLGPGVFPGGAPLPGGAQPPQPPVGSGTFSGSPALPQPPARADRSVLRIDVLTGQPIGPPVRADVQARPAPATLERHHVWAGAAAGTLVRITDRPPPGLVDRLLGRRVDDTTTIALPEPDLLVDALEPAGALVLALVHARGERRVRLLALDPSIGALRWDTRDLGPTPDSPAGAALRIHGTLAAVATGTTPDGPTQITGIDAERGVPRWSLAITGWTGHDLLGDALIVWSREHAQIVRIADGTALGFWPLVER
>NZ_CP012159.1|WP_050431923.1|5450539_5451259_-|hypothetical-protein
MASDRFCAKCGQRLRVLSAAARSDEASDEESPSSEPSPISTDEEAPRAGPTWPYPEITQPRWASPKPTMTYVYIGSAVAFSLLFVLSPSQSGAFAPGVIALMSWAMTGYALNNAAHRKRVARELSTSGIRCWGRILQVGPAPWSTGTAIGQPVYRQTHTRVRLQVDAYAAPDPQRPRKRRKKGPRLIAELSIEEYISLAQMGMVQPGNFCALLLHPTDHSQVVLDGLATSKGDFVPLAW
>NZ_CP012159.1|WP_050431922.1|5449691_5450345_-|hypothetical-protein
MPSGASPHDTPSHAHPGAATPAAGPPWPYPESNQRVLHDPNGQLLGTILLFTGAVFALMAIGFVLFVGGGKDDRALFMVLPLVVAPALLCLGGGALMMRAAARHKRIAEEVAASGIRCWGRILQATPIQSDRRTRMRVQLQLEAFAAHDPRGMQDTSRYAPGARVALPVSIEQSVSLVQMGMLQPGYFCALLLHPTDPGKYLIDGFANPQGAFAWLA
>NZ_CP012159.1|WP_050431921.1|5448824_5449655_+|hypothetical-protein
MTASADAVSSEAVLRAPRVLEPSRGLLEALTRCAAVRKELRELDGMRNSENAEEEVPLFGARSREPVVDLAALVLLEREMGCVLQDDLLVLLAVRDPVARTFTGLHDLASVGDAEDAGAYESETHACIAMAYSDPIAEMVDGAHGGAYVHLWVPRGSAPSATVVVSTGDPSEGTEMTVGEYLMQRLDEAVSAGWLGAYGEKRVALLRTPARLQGSAPAPVLQGKRMRVRHARFGEGTVVETNHDGEEVKAVVAFADGQRTLMMRFLTVQEADEAPV
>NZ_CP012159.1|WP_050431920.1|5448324_5448828_+|hypothetical-protein
MSGTSGSIGVAMATDVFFTSRLTGHQLWRIRVRDTHAQVMTCKVLQDAARWRGESTHRGGTLETVVQAPPVYGQVTLNPGEHAWIVVRRSRETWHEHPWKGHWPIERVGDEEVVTFIAQRTLSPDFGEVPDRLRPHSRLHPTLRHAVWIPAEPFARYLKMLVKEEAS
>NZ_CP012159.1|WP_050431919.1|5447630_5448260_-|hypothetical-protein
MQTSLPHGAAAPSAGPPWPYPEPEPRVLPRSRDHALGWGFLFGGALLTLVAAYLVVAFDALRSIDLLVVFVTPGVGAFAVSLIGVFTLLKNARRKRRDEEVAHTGIRCWGRIVQAAPIQGRGHARSYLDVYLVVEAFAAHEARPTQGPRPYAAGTRVAAQVAFEQHVSLVQMGMLQPGYFCALVLHPSDHGRLLLDGFATPQGAFARLA
>NZ_CP012159.1|WP_156338738.1|5444365_5446522_-|hypothetical-protein
MPYTTKLPDLTGVRGTHYTKESNFLYYVRSNGSSGEVYRLPLHPSTLVAEGFGITFTSGSVNLNSHGAVDIQRQPGFQFKGMNNARVAKLTDVNALSAITSDQMLSVNWSSITNNNIVTIDTDNGVVKDTFYVVRIPTTIGTINAFNYAKVRVYSSSGVVRIDWATLLFGANPIRVSPNYDDPRDIVVSEYESDIYISGVSPSGGYVARFTRLVGGPYPQYTLSPIYVNVDPLDEPQQLTVEGSFVYVVDKTSVWRCDPSQGIQEELVSGLSGGIGLLLETRDSVLRAYIIDGAGDIRIVSLSDYASFPLPAPPPVYSIGAAPGFMSWADEEHTAIYVTDRSSNRVLRLDLASGDVVPETSTPPIPWSVEVISPNDIYIASDSEIGLYSRSLTVTSVLPLGIGVIPFQYINNSEANPSSPAPDDGKVNTSSAPGYYFSQYPNLPLGGNLSLMINHELAWNSAIRFYRVSLRKVESLQGRTITSSFTDLIWNSNFVPPRFEPTVTAATNNAYPIRNPNELWFSPYLGTIIATNTSDNGHNVLKIEFLNANMQVVPNGTFERLILIDNTRYGGRLEFPRVGSNTAAPAANVYPNPATNCGCVSFDTKNDLVEIDFGAWQPQAAGEYTLSVSKGGKALPLLKETGSVTPSPTLHQKTKTSANKPIRVGHLVEDCDVANIVISLSVPSRVIDGFGWVNLSANFSRSFTLIKGAVTHSAWQEP
>NZ_CP012159.1|WP_156338740.1|5458805_5460848_+|hypothetical-protein
MRIAMCLGLLALASCAGDPSGAVARGNGDSEGPDGEAPSEPGGLTGGGGDEDPGVGVTVHLQRAVEGGSVLSFGLPLPKAAVQDAAGMQVLVASAPVAATIRETLAYHDASGSRTGTRAVVVQLPASLMSADGLDVEVRWTGGAGSSAGEPLPFASDEVSAVATATARTTTRTIVQQGGSYALSEGPVAQKPLFTAREPRVLATFPEGYLARTGILGPQVRAADAQPGLAFFSSALDGFASSAMYRESYALNPDADSVVDPIADFSAWLYDRCATFLTAHTHLGDVETLRHGFQNCSYYAGKIELSGANRGIFTGKPTADTKYSHLRGLYAYYALTGDESALEAGKAIADMWYADPLFVVPYRDGHVRGRDKLWTERLLGTSMEGLLYGHQLTGDLKYKEALGEMVDTAHRHITGDAGALAEVNPGMTFPPQNCFIHSGEQHADAMAGDPWCSPWMSAMIIDPLLGWEEQTGDTRVAEIFVRLSRFLRDVGTSYFTNDLLNDSFLSPSVCDNPGAGDNRRRLVPLYGAGIRSNGGRATFGEWDDWQHCADATAITAAGLRALKQAEIYDEGAIGPFASEGEALLALHHELVACAERGFAEATRTRRDPANWTSAELAAGAGNPTAFITQNRIGYPLHVNNPQRRFSWWFNYAMLQQKLLAEAGIEIGEITPGAVQPAGCP
>NZ_CP012159.1|WP_050431932.1|5462378_5462633_+|hypothetical-protein
MAFSSIFAMGCGGNACDDAADKAEECGLTSSGGSGDSGDVECTGTVECAANCIVDAPCDAFDGSNADASTAYLECVTGCSGSGS
>NZ_CP012159.1|WP_050431933.1|5462861_5464460_+|serine/threonine-protein-kinase
MATCPRCRKRYPDEKTICEADGEVLLPDEAFHGLDVELLPGRMVGEYRIEGKIGEGGFGAVYRAVHPLIGKAAAVKILTRSYSASPQMMSRFIAEARAVNQIRHRNIIDIFSFGALEDGRQFFVMELLDGMPLDRYLKQKGWLSPEEAIAILRGVARALDAAHAAGIVHRDLKPENVFLLFEEDGSIFPKLLDFGIAKLLGDGEAGVKTRTGQPMGTPYYMSPEQCRGKPVDHRTDIYSFGILVHEMLTGHVPFSGDSVMDVMLKQTAEPPPAASSVRSELSTLLDAPILAMLCKAPDDRPESVGLAVESLARAAQEAGYDVQAQPVARVSRKSGGSGGGGVASGMTPAELKAISGADTLVDPRSSGRTPLDAVADVEVSGRRRTAVVVAVVSLVTGLAGATFVASLDSTPTGALQAAMHLPPPPRVEVPAKEAPPEPSVVAEQADVSLSIQSSPRLVDVYVGTKKLGTSAQPLSLPRSKSPIKLTLKATGFVSKDVEIVPSANVVLPVTLTSVPAKKSPSQVVPGRGEVEW
>NZ_CP012159.1|WP_082362636.1|5464488_5467305_+|VCBS-repeat-containing-protein
MSRRLRRGVWLAGVVLTVAACVEFPDRSRAICGDGFLDEGEDCDGHSRSFDGKDYECDLRRCRLVCDPTDVEACREAAASQSASTSEGAPMCCPAGWGCGVDGICRSAQNQYVRGAAVEITVSQLVTADFDGDGLQDILSVSDSELAVHHFAAGSMSQALRLNVSDQVIAVGNVVRVGEEGGEDLVLAIGNGVGVLRGDPDHRFTPEMYPVPLRFDQKPLGHQQWKMVLADRGIAHDDSLDDVSVVTPNEVILLRGHGSEGGDSLGGSLHASQLPGVAELRWPIVAANIDRRTPCEELIIPLMYQGTPAVYLHSPCDPDLPSTGWMFQGASGFAGPVQVFSMKDDPAQPVVALGLRYGEGDDASTVIRVLRHQGERFEEGPCVVVSPQGQSTNEDESCVKDPVPLAIGDLDGDCIPDYVDPCQVVMSANSASSSAMCGAGAGQGSVCHAGMALNPSNFRNTQLPWTTALIQDVNGDGNSDVLAVAARSTALSFYRGTGKALLNPSSIPVGVPLGQLATGDFDGDSITDIGILEETAEGADAQVLVSFGQYLTKPGSPIRIGSVRGGSQLVTGDYRPLSAARDGMTDLAVLSVPSEDTPMPGPRREDAILTLFAGNADRLMQSTISLTDDVLKSGDVPKQIAIGRFAPDSGSDARGGELAVLALDTEGSNFEPRLWRLPLTPGGDSGGRRLEVPEARLSKQIAISSQIATQHMADGQDRLVILTPDLESPPDGNWRLYTARVVDGAWKLDDTPVFLGGRLAPGGLSVADIDGDGIGDVSLVLETGTVGNEESELQIFWGEPGGVSKSTEVTRILGCPSEAAGVTGAVWANMDDDSSLEGILLAGTAFCRIDFLNPDTSTSCPEAGQGGTRCPRPHAFSTIQGQGGEQVRPTGGGLSNHEGVEPRWTAVALGDVNGDGLPDLILGDTSSFQLFLAQPENP
>NZ_CP012159.1|WP_156338741.1|5467301_5468573_+|PEGA-domain-containing-protein
MTKVWRSVVAAIAISLMTWPVQAQGDPVTQAKSLFNAGAQAYERAQYPAAIQAFEEAYRLSPRPGILFSIAQAERRQYYVDKQPEHVLKAITLYNEYLASVPQGGRRSDVVQALAELEPIAARLEAAQRETPGPAPAPPPAPPKRQTQLMISSTIEGAVLSMDGGEAKELPFIEEVKAGKHRVKVSAPGYFDDEREIVAPEGGVVALDVTMRERPARLFVKTDAQAEVSIDGRVVGEAPLVQPVDIPAGKHLVTITRGGRKPFSRELQLERGELMTVDAPLDRTMQRYLSYGLFSVGVAGLVVGGAFGGLALREQGIAQEIYDRTAQGNVLSAEREALLSAIEQRNRWREVSSATAVSGAVLGAAGVLLYLLDNPTIARTPAPEVSPKAPTPRKPRRSEPFMEVLPAPLISPDLKGAMVEVRF
>NZ_CP012159.1|WP_050431936.1|5468569_5469373_+|carbon-nitrogen-hydrolase-family-protein
MSRDAALEGAGAGVTVGVVQLPYRSGEAAGGLAALEALLEAGELRGVELALLPEAALTGYVSPEGDFDLRRHAETMSGPTARALASMARTFGLALAAPLIEEADGRFYNTLALWDREGQRIGHWRKRHPWFPERWATPGDLGSPVVEVLGLRVTAAICFDIHFVSEDAGAALDAADVLLFPSAWVEGSARVDLRGKLLPAVARRHGVAVMNANWGPPEGGSLWAVAGQGGSRILDAGGRVLARVRPGAGSIVARARVQGSEASSGRR
>NZ_CP012159.1|WP_050431937.1|5469380_5470565_-|radical-SAM-family-heme-chaperone-HemW
MKPITAYVHFPWCLQKCPYCDFVSYAKPRESIDHRRYAEAVLEELARRAPELRQRELRSVFFGGGTPSLWEPVQLGRVLDAIQQTAASVAPHLEVTVECNPSSLDEERARELLEAGVNRLSVGVQGLDNERLDFLGRLHQADGGLTAVRAALRAGVPRVSGDLIYGVASGDTTRPREQGPEEAANEALTLARTGVGHVSAYSLTIEAGTRFGELSRRGRLPLAADDGVADSFLAVEAALTQAGFLHYEVSNYARPGEEARHNVGYWTGIDYLGLGCGAVGTVSRPDGSALRYRNAKNPERYMHAAHAGEPTTEEEETLDPETRLRERIMLGLRLRDGVDLEEAATALGVHAWPAARQRTADRLSREGRLEIRNGRLTIPSRSWLLADGIAASLF
>NZ_CP012159.1|WP_050431938.1|5470752_5472915_+|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase
MLTLTELVDRVRTYQPHTDVDLIARAYNYGFDAHKGQTRKSGEPYFSHPASVSGIISDLRLDTASICAGLLHDVVEDTLATVTDIEAVFGQEIAFLVDGVTKLSKINFASKEDRQAENFRKMLVAMARDIRVLLVKLCDRLDNMRTLDFMKPEAQDRIARETMDIYAPLANRLGIARFKSELEDLSFKYLEPEAFADLTRKVATTAKEREKYIHDTCKVLAAKLAEQGFAVDVAGRAKHLYSVWRKMQVQQCDFDQVYDVIAFRVVVESVAECYATLGVIHSQWTPIPGRFKDYIALPKPNMYQSLHTTVIGPGRERIEVQIRTSEMHRVAEQGIAAHWKYKEHGSGGVDPRDAARFSWLRQLMEFQKELKDPAEFLESVKVDLFQDEVYVFTPKGDVRVFPRGATPIDFAYAIHTEVGEHCSGARVNGALVPLRSKLRNGDVVEVMTNPNQHPSKDWLDHVSTGRARSKIRAFLRQEQRDKSLKLGRELLEKEMHQRGMSLNRLSKNEAEMRKVIERFSVSSSEELFIGIGYGKLSARVICEFLAPVEDDKSASPPESIKEGRIESLVRKVTGKGSQGIRLNGIDDVLVRYTKCCNPLPGDEIIGFITRGRGITVHRRNCPKAFDTDPERRVEISWDSRAKINRPVAVRVMTANRPGILATVGHTFHEQGINISEATCRASDDGRAMNTFTFLCSDLAQLKNIIRQLQRIPGVMAVERS
>NZ_CP012159.1|WP_082362637.1|5472946_5473453_-|YkgJ-family-cysteine-cluster-protein
MHADRRRSKRENDHWLTTLEEIYRDADDAFATWSCSASTECCRFGLTGREPYVTSVEVAAIHRAVAALGGVKALRARRGTPAKETSSPSPRHLPVAERRCPLLSDDGRCAIYEDRPLGCRTFFCDRAESGAPVRHKELLALVRRVQELAAKHQPGGDQGRPLTRILQL
>NZ_CP012159.1|WP_050431939.1|5473831_5475130_-|FHA-domain-containing-protein
MSEQSVLRVELAEATAPATHQKEYRSGIHAKRRDAAGGWGLVMVSVNHPPQVVGLNDGAVVGSAERESLMAIPGIAPEHARVNVRSDGCYIEDLGTQEGTWVNGVRARRINVMHGDVVRLGEQIAVFVERELNLHEGIPGRLGPLVHGSKQHRDWIEPALDLVRRGSNLCIEGSPGVGKRTLAHQAAMLRQNLGDIFVIDGTVEGKPIATVYDPSTPGKAGTTPAPAGVRPVTWLIYSADRLPRPQQLEVAHAVGRMTGATLIITTDQPLDRAAGDGHIAPWFASLFSGKRLTVPSLELRREDILLIVRDIAERMGIALDRFTPDLLEALVRAGWPGGVPQLENVITTAAQATPEGPLALASIADQLSRGPRLKPNLPPATDPSLARARLEDALARANGSVASAARALGMSRQAIYREADRLGLDIARRKVR

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Crispr_ID: NZ_CP012159_23

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012159_23

5577569-5577671

Orphan

Consensus_repeat	Method
GCAGGCATCTTGGATGCGGCGCTGACACC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP012159_23

>merge|NZ_CP012159|23|5577569-5577671|CRISPRCasFinder
GCAGGCATCTTGGATGCGGCGCTGACACCTCGTCCTCCCCGCGCAAAGGGGGGTGCTCGGTCGAAACGACACGGTGCAGGCTCTTGGATGCGGCGCTGACACC

>NZ_CP012159|23|20|5577569-5577671|CRISPRCasFinder
GCAGGCATCTTGGATGCGGCGCTGACACC	TCGTCCTCCCCGCGCAAAGGGGGGTGCTCGGTCGAAACGACACGG
TGCAGGCTCTTGGATGCGGCGCTGACACC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012159.1\|WP_050431996.1\|5568752_5569481_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237030
NZ_CP012159.1\|WP_050432005.1\|5587835_5588258_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050431998.1\|5569980_5571390_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|100082
NZ_CP012159.1\|WP_169796602.1\|5574054_5576673_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|379646
NZ_CP012159.1\|WP_050432007.1\|5589605_5590466_-\|DUF692-domain-containing-protein	unknown	unknown	gnl\|CDD\|377459
NZ_CP012159.1\|WP_050432001.1\|5577816_5578572_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187632
NZ_CP012159.1\|WP_063796319.1\|5565341_5566349_-\|GAF-domain-containing-protein	unknown	unknown	gnl\|CDD\|376570
NZ_CP012159.1\|WP_050431999.1\|5573099_5574014_+\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|378976
NZ_CP012159.1\|WP_050436022.1\|5591102_5592065_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050432004.1\|5587096_5587831_-\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	unknown	unknown	gnl\|CDD\|153251
NZ_CP012159.1\|WP_082362648.1\|5571472_5572393_+\|SGNH/GDSL-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|238141
NZ_CP012159.1\|WP_050436021.1\|5588290_5588707_-\|YjbQ-family-protein	unknown	unknown	gnl\|CDD\|223509
NZ_CP012159.1\|WP_082362649.1\|5576696_5577440_-\|HAD-IA-family-hydrolase	unknown	unknown	gnl\|CDD\|319829
NZ_CP012159.1\|WP_050436020.1\|5566496_5567759_+\|family-1-glycosylhydrolase	unknown	unknown	gnl\|CDD\|274539
NZ_CP012159.1\|WP_156338744.1\|5590542_5590803_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050431995.1\|5567807_5568608_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|131480
NZ_CP012159.1\|WP_156339332.1\|5588752_5589592_-\|putative-DNA-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|378264
NZ_CP012159.1\|WP_050432003.1\|5583189_5586960_+\|thrombospondin-type-3-repeat-containing-protein	unknown	unknown	gnl\|CDD\|275366
NZ_CP012159.1\|WP_050431997.1\|5569523_5569967_-\|dUTP-diphosphatase	unknown	unknown	gnl\|CDD\|234802
NZ_CP012159.1\|WP_050432002.1\|5578598_5582717_-\|thrombospondin-type-3-repeat-containing-protein	unknown	unknown	gnl\|CDD\|276965

Protein	Function_ID	Function_description	E-value
NZ_CP012159.1\|WP_050431996.1\|5568752_5569481_-\|hypothetical-protein	gnl\|CDD\|237030	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.	3.54138e-07
NZ_CP012159.1\|WP_050431998.1\|5569980_5571390_-\|hypothetical-protein	gnl\|CDD\|100082	cd06161, S2P-M50_SpoIVFB, SpoIVFB Site-2 protease (S2P), a zinc metalloprotease (MEROPS family M50B), regulates intramembrane proteolysis (RIP), and is involved in the pro-sigmaK pathway of bacterial spore formation. SpoIVFB (sporulation protein, stage IV cell wall formation, F locus, promoter-distal B) is one of 4 proteins involved in endospore formation; the others are SpoIVFA (sporulation protein, stage IV cell wall formation, F locus, promoter-proximal A), BofA (bypass-of-forespore A), and SpoIVB (sporulation protein, stage IV cell wall formation, B locus). SpoIVFB is negatively regulated by SpoIVFA and BofA and activated by SpoIVB. It is thought that SpoIVFB, SpoIVFA, and BofA are located in the mother-cell membrane that surrounds the forespore and that SpoIVB is secreted from the forespore into the space between the two where it activates SpoIVFB.	4.41062e-34
NZ_CP012159.1\|WP_169796602.1\|5574054_5576673_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|379646	pfam14559, TPR_19, Tetratricopeptide repeat.	0.000593907
NZ_CP012159.1\|WP_050432007.1\|5589605_5590466_-\|DUF692-domain-containing-protein	gnl\|CDD\|377459	pfam05114, DUF692, Protein of unknown function (DUF692). This family consists of several uncharacterized bacterial proteins.	5.86979e-154
NZ_CP012159.1\|WP_050432001.1\|5577816_5578572_+\|SDR-family-oxidoreductase	gnl\|CDD\|187632	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs. 17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	1.90143e-82
NZ_CP012159.1\|WP_063796319.1\|5565341_5566349_-\|GAF-domain-containing-protein	gnl\|CDD\|376570	pfam01590, GAF, GAF domain. This domain is present in cGMP-specific phosphodiesterases, adenylyl and guanylyl cyclases, phytochromes, FhlA and NifA. Adenylyl and guanylyl cyclases catalyze ATP and GTP to the second messengers cAMP and cGMP, respectively, these products up-regulating catalytic activity by binding to the regulatory GAF domain(s). The opposite hydrolysis reaction is catalyzed by phosphodiesterase. cGMP-dependent 3',5'-cyclic phosphodiesterase catalyzes the conversion of guanosine 3',5'-cyclic phosphate to guanosine 5'-phosphate. Here too, cGMP regulates catalytic activity by GAF-domain binding. Phytochromes are regulatory photoreceptors in plants and bacteria which exist in two thermally-stable states that are reversibly inter-convertible by light: the Pr state absorbs maximally in the red region of the spectrum, while the Pfr state absorbs maximally in the far-red region. This domain is also found in FhlA (formate hydrogen lyase transcriptional activator) and NifA, a transcriptional activator which is required for activation of most Nif operons which are directly involved in nitrogen fixation. NifA interacts with sigma-54.	3.28947e-12
NZ_CP012159.1\|WP_050431999.1\|5573099_5574014_+\|AraC-family-transcriptional-regulator	gnl\|CDD\|378976	pfam12852, Cupin_6, Cupin. This is a family of bacterial and eukaryotic proteins that belong to the Cupin superfamily. Some of the proteins in this family are annotated as being members of the AraC family of transcription factors, in which case this domain corresponds to the ligand binding domain.	6.4257e-40
NZ_CP012159.1\|WP_050432004.1\|5587096_5587831_-\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	gnl\|CDD\|153251	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), Tafazzin (product of Barth syndrome gene), and similar proteins.	1.82265e-56
NZ_CP012159.1\|WP_082362648.1\|5571472_5572393_+\|SGNH/GDSL-hydrolase-family-protein	gnl\|CDD\|238141	cd00229, SGNH_hydrolase, SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.	1.12242e-09
NZ_CP012159.1\|WP_050436021.1\|5588290_5588707_-\|YjbQ-family-protein	gnl\|CDD\|223509	COG0432, COG0432, Uncharacterized conserved protein [Function unknown].	3.74004e-60
NZ_CP012159.1\|WP_082362649.1\|5576696_5577440_-\|HAD-IA-family-hydrolase	gnl\|CDD\|319829	cd07527, HAD_ScGPP-like, subfamily of beta-phosphoglucomutase-like family, similar to Saccharomyces cerevisiae DL-glycerol-3-phosphate phosphatase (GPP1p/ Rhr2p and GPP2p/HOR2p) and 2-deoxyglucose-6-phosphate phosphatase (DOG1p and DOG2p). This subfamily includes Saccharomyces cerevisiae DL-glycerol-3-phosphate phosphatase (GPP1p/ Rhr2p and GPP2p/HOR2p) and 2-deoxyglucose-6-phosphate phosphatase (DOG1p and DOG2p). GPP1p and GPP2p are involved in glycerol biosynthesis, GPP1 is induced in response to both anaerobic and hyperosmotic stress, GPP2 is induced in response to hyperosmotic or oxidative stress, and during diauxic shift; overexpression of DOG1 or DOG2 confers 2-deoxyglucose resistance. These belong to the beta-phosphoglucomutase-like family whose other members include Lactococcus lactis beta-PGM, a mutase which catalyzes the interconversion of beta-D-glucose 1-phosphate (G1P) and D-glucose 6-phosphate (G6P), and Escherichia coli 6-phosphogluconate phosphatase YieH. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	6.04867e-57
NZ_CP012159.1\|WP_050436020.1\|5566496_5567759_+\|family-1-glycosylhydrolase	gnl\|CDD\|274539	TIGR03356, BGL, beta-galactosidase.	3.38591e-109
NZ_CP012159.1\|WP_050431995.1\|5567807_5568608_+\|alpha/beta-hydrolase	gnl\|CDD\|131480	TIGR02427, b-ketoadipate_enol-lactone_hydrolase, 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate. [Energy metabolism, Other].	7.61009e-36
NZ_CP012159.1\|WP_156339332.1\|5588752_5589592_-\|putative-DNA-binding-domain-containing-protein	gnl\|CDD\|378264	pfam09836, DUF2063, Putative DNA-binding domain. This family represents the N-terminal part of a Neisseria protein, UniProtKB:Q5F5I0, Structure 3dee. It runs from residues 31-117 as a helical bundle with 4 main helices. \From genomic context and the fold of the C-terminal part, it is suggested that this protein is involved in transcriptional regulation.	2.16783e-13
NZ_CP012159.1\|WP_050432003.1\|5583189_5586960_+\|thrombospondin-type-3-repeat-containing-protein	gnl\|CDD\|275366	sd00002, TSP3, Calcium-binding Thrombospondin type 3 (TSP3) repeat. TSP3 repeats of the vertebrate thrombospondin (TSP)-1,-2,-3,-4 and TSP-5/also known as COMP (cartilage oligomeric matrix protein), and related proteins. These short aspartate-rich repeats are a continuous series of calcium binding sites that can be divided into two sequence motifs: N-type and C-type. N-type and C-type motifs are distinguished by their sequence length, calcium ion binding, and their interactions with water molecules. C-type motifs are higher affinity binding sites compared to N-type motifs.	1.39024e-24
NZ_CP012159.1\|WP_050431997.1\|5569523_5569967_-\|dUTP-diphosphatase	gnl\|CDD\|234802	PRK00601, dut, dUTP diphosphatase.	5.83786e-78
NZ_CP012159.1\|WP_050432002.1\|5578598_5582717_-\|thrombospondin-type-3-repeat-containing-protein	gnl\|CDD\|276965	sd00038, Kelch, Kelch repeat. Kelch repeats are 44 to 56 amino acids in length and form a four-stranded beta-sheet corresponding to a single blade of five to seven bladed beta propellers. The Kelch superfamily is a large evolutionary conserved protein family whose members are present throughout the cell and extracellularly, and have diverse activities. Kelch repeats are often in combination with other domains, like BTB and BACK or F-box domains.	4.48972e-28

>NZ_CP012159.1|WP_082362649.1|5576696_5577440_-|HAD-IA-family-hydrolase
MLTTSQVHPVDAVLLDMDGTILNSIKSAERIWSAWALRHGLDVDAFLPTIHGVQTVETIRRLGLPSVDPHAEAAAITQAEIDDVEGIEAIAGVAEFLGALAEGSWGIVTSAPRALALRRIEAAGLPTPPLLIAAEDVAHGKPAPDCFHLAAARLGTTADRCLVVEDSRAGIVAAERAGATILVITSTHPTPMAVEHPAIVDYRDLVLETTPDGSLHIRHAQGGGDRPARLSCIVKAGRPSETSRPRL
>NZ_CP012159.1|WP_169796602.1|5574054_5576673_+|tetratricopeptide-repeat-protein
MDSTTVASTPVCTMSWHEHPEGRAGFLRELLVDWSHLNAQVERAWSPALVGRQMKCSALAWLLTCAQEGLRPSVLAAALRLEIWPSRVILAELAHVRDPFTHRTSVRAVLPLLEAHALDELLLTADITHPRAYPVPELVARLVAEGRWDDAVAWALAPDLDGQRLDQVGPLFVAAPAVHRERVRDAVRSLVEALDGEEGVDALDPDEVEERIEILLAAARVLEGEERHALLARASAGLEAMDDAALQREPGEPDLRAKLAEALFAANQPEEARAWLARAGEHLAGDRAAPGTVEHLRKEVESGDPTTARAAAARLFDLFVAAASPDDGANDRAASVRLVWRVIAIGKAAAYLGPERCHQALARVWALTLSPPQPLSGWDLGGALIALLRAAEEPQRSHLAAKLCEHALRHPEMFPPLCEFSGWEEVYSTAEQRAYLQHLLRRCRLSKPAPLVRALLQCSAGCDALLRLRAGEAALHVARLHEAHELVPEVAAAVPSLWTACVAHLDAVHRPPIAVWAELLASVPPEQATALAQRLMDLRHDEIATSVFAPSFLSALPLEEAERHIDRFSEGSRRMLPLGRLPEPLSLRVFRHRRDALRGREDHQQRLAQLLVDAIPLRHHACVAHERAALFSWVGEQLASAPDESARAETEHAIWLLCHPLSLISDLADLDAFRASILARGSARLLRTLNGRYLTLKAPEQVDWRGGPDEFESPVWRALGMARTREELRAALALDPGVVGYPWVAERVLERGLGAAFAELATEQPRADERVRIWRSIWASLDSPTRHALWPALRSALDTCREEKRLERFALLPWLTAPQAQSEWIAEQSMQCTERYFELTPAFTGPLSAWTEHTQALLEIVAQCFPEEPTGG
>NZ_CP012159.1|WP_050431999.1|5573099_5574014_+|AraC-family-transcriptional-regulator
MDPLSDVIALLRPSTAISKPITGRGRWGVRYAAYNAPGFTIILKGECWISFEGQEPTRFQKGDFLLLPSSPAFTLSSHPDVVCEPREPTATAVRHGEQEGDADFESLGGTFQIELANAPLLLALLPRIIHIPASKGRAGRLGRVITLIMEECASEEPGKEMVLQRMLEVLLIEALRWRGLAADEVRAGLLNGMRDPALARVLCAMHADVRASWTVAGLAKVAGLSRSAFAARFAEVLGCGPIEYLARWRMALAKDALVRGAKTLDRIADEIGYESASAFSTAFRKRLGCSPGKFAKSGGVAEVS
>NZ_CP012159.1|WP_082362648.1|5571472_5572393_+|SGNH/GDSL-hydrolase-family-protein
MVKVHPIGRLWQIGACILGVSCGSTPPASAPSSAGAAAGQNATEHRDAAPLSVRPAAASSAPGESSGQTGEVSSTGKANATSAQASVERAPPPPIPPRTAVLHIGDSFTLAGFAQALKPRMKALGVRYEVKAEQSSYTVTWAPKMELLVANTQPDLVIISLGANEVANTDPPAHGPAIRRLVQSIGKRPCVWVAPPLWRKDTGIIDVIRENSAPCRFFDSDSLVKGPIPRQSDKIHPNEEGGALWAEAFWQWLETERARAGEVDAAGVSAGGASGEGRSPWALRAGPVEEHRARPVSGGSAAVGRL
>NZ_CP012159.1|WP_050431998.1|5569980_5571390_-|hypothetical-protein
MRAVLSFRFFGIPVEIQPWFWITAFIINWSLLNRGGYSAAFQVGLMLVWLAVVFVSVLVHELGHAFAIRRHRIEPEITLHGLGGATTWRTVLPLGRLDHIFISLAGPFAGFALGGVVYLVKTFTPATVALPDLALFAIDSLLWVNIAWGIFNLIPVLPFDGGHVLEHALGPKRTRLAAGISFLVAGSLTLLSVVYRQYWIAFLFGMSAVQSYQRFRAEADVTAVDLERARQAPREDAIPGELLSLIRRGRRALADDHLDEAAALAAEILARETVPRPAARQAHEIMAWVRLLGDDPKTAQVSVVQARRYGDVDPALEAGVARALGESRVARRILEEARMAGDDRKEVVGPLIQLLLEQGEVNRAAANALDIVESLSEEDARKMAEIAFDEGSFEWSARLYEAVFRRNGASEDAYDAARASAKSGNADQALELLKKAVEAGFSDRTRAWSDSALESLRSNERLDTVFPRH
>NZ_CP012159.1|WP_050431997.1|5569523_5569967_-|dUTP-diphosphatase
MQVKIPYMRVGAVEVPVPAYQSAGAVGLDLCAAIEAPITLSPGERRLVPTGYAVAIPRGYEGQVRPRSGLALKHGVTVLNAPGTIDPDYRGELKVLLINHGEAPFSVARGERIAQLVICPVGIADLVAVDTLDATARGGGGYGSTGV
>NZ_CP012159.1|WP_050431996.1|5568752_5569481_-|hypothetical-protein
MMRSALCLGSLLAFLSACGSPPPPEAPEPLAEPAPAAPVEPAPAAPAEPVAEEPKTPAPAAAPEPEPSDAEVLARDFLKTGGRRIGYSATKKGFAYPLEQRNQEGFRLDILFTDEEGRKKDVIAVCDFASCVERLDEVSKTLRPKLAERLQSEGYESIRGIGWPSGRDELEVGVLGMKLRYTGGRLEGLREGKPAATLGRLGAKAPELLAIFVVPESKRLGVLVKPADGKGVVQELHVVKLP
>NZ_CP012159.1|WP_050431995.1|5567807_5568608_+|alpha/beta-hydrolase
MQTARIGDLDIHYQVFGEGEPVLLIMGLGTRGDSWTPMAQALAGSGYQAIQFDNRDIGWSSLVEHPQYEIADMAEDALGLLDHLGLDQVHLVGISMGGMIAQQLLTTHPARFRKAVLLATWAGGRDVVASPPELLAPALTPGLDHDTAQRRLLTAIAAPGFIDAHPELLAMVLEASRKRPASPAAVARQLAAVLRWSSWDKLPEVTTPTLVIHGDHDPLIPLANGQRIAERIPGARLLVLPGVGHLVPMEAPRETFTAIQRFLAEA
>NZ_CP012159.1|WP_050436020.1|5566496_5567759_+|family-1-glycosylhydrolase
MREVLEFPEHFLFGTATAATQIEGHCEDTDWAAFAREPGRIRGGDTPAVACDHLHRFREDVAIQQQLGLGAHRLSLEWARLEPGEGDFDPAAWDHYREVLGAHRDAGITPMVTLHHFTIPRWLAARGGLANPELPRLLSRFAAHAVEALGDLCTLWITINEPNVVASHGHLLGVWPPAHHAPIEAFRVLQNLLAAHDAMYRAMHDTASQRGHDLAAGVAHHLRIIEPDDTGRVADRAWTALYEWLFNGWFAGAVCERKTHDFFGLNYYSRDLVRFAPERFREAFLERNVRAGAEVNDLGWEIYPEGLGQLLDLWAPRAGVPVYITENGLPDDDDDQRPRFLVRHLAEVARALQRGLDVRGYMHWSLLDNFEWAEGYAPRFGLVHVDYETQTRTPRPSAALYARIARERRIDDATWAAIGA
>NZ_CP012159.1|WP_063796319.1|5565341_5566349_-|GAF-domain-containing-protein
MAILDDPQRLNRLDPAITRLDADAILDACVEEAARLAEAPIALVSLVMRHVQLFRAHRGLPPELALSCATSRRNSFCQFVVRDERPLVVEDTTIDSWVPQDLVERYGIRAYAGVPVRVDGQPIGTLCVIDITPRRFSPAVMNALEVLGTRVAARLSELVGDEPAEGPPAAPQERLRLLRRMARLLEGALQALGPPLEQARAAELSDTPTLDPAIRSDLSAAVLCYEDLAVAARELSTEATRLSRGAPDPRVETLLMEARSLTRELDEAGPMVRLAQGALSDRVGLEAAAKAVSVTRQALDFHANALAAAQRLLKAADAVDAAWTEVLTPAGEVAP
>NZ_CP012159.1|WP_050432001.1|5577816_5578572_+|SDR-family-oxidoreductase
MKTILITGASSGYGLEIARHFLANGWNVVATMRKPNPEVLPRSEKLRILPLDVTSDDSIRACIEAAGPIDVLVNNAGIGVVGAFEATPMAHIRKVFDTNTFGVMAMCQAVIPQMRERRSGVIINVTSSVTLAPFPLAAPYKASKQAIEGFTEALALELAYFDVRTKIVEPGYAPTTRFTQNTSINPLDLIPAAYQGFAGPIFAEFGSPKMTTKETDVAAAVWAAANDATGQIHFPAGEDAVHFAKIRQFGG
>NZ_CP012159.1|WP_050432002.1|5578598_5582717_-|thrombospondin-type-3-repeat-containing-protein
MRHRYAHVAPRILAPDVPFASTPQGFALVASTTSAEGMQVPFAGGVQVALPRRTAEPIRIQARKPSLALEEGTLEQDDAFEVRVHEIGLTGEGTLHGGAVVYAREGGRSFWTSVPEGIEEWLLLKPEATRAEAPSVLWAVDGGRPEERGDSIVILDDHGQVRLRVTAPEAWTASGHAIPVRLSVEDTRIALWVDGRGEEVLVDPQWTAGGSLSARYYHTATRLEGGHVLVTGGSVGATYLSTGQRYDPLANVWLDAGDMLDGSGFTARRRQHTATRLDDGRVLTAGGFNISAQSTAALYNPVTNTWVSAGSLLQSRYNHTATLLPDGRVLVVGGQSTATTYLPSVEIFDPAANGGSGGWVTNPAPQPMPAPRAHHTATLLPSSGRVLIAGGLNAGGVLDTSLLYDPGANQWVQTAEALSPPRRNHTAVLLVPTDDVLVIGGLTPTVTSTAQFYEAATQSWRDVDTMAVPRVYHSATLLDGQVIVVGGDTTAGSGVTTDSVETFQWPPGNPSAGGWTLLQPFPSVPRQDHTATLLDDGRILLAAGRTGSTVLGSTALYSMGCTGCGCTTNSDCDTGLCVDAVCCATTCDAPCRACNVPGNLGTCSIASVGQQDTCAAGQVCSASGACSSGLGGPCMTGTDCESGFCADGVCCSSACDGVCQSCNAPGNEGTCLPTPAGVQDTCAPGEVCNGAGSCRKTDGQACSTAIECLSGFCADGVCCNTACGGGSPTDCQACSMATGAPIEGVCTILDSSVTCRPSQGECDPAEVCNGAQPLCPTNVTAPDGSACAGGTCTNGTCVTGSKGPGEACAGPAECSSGFCTDGVCCQTACDAACQACNLSGNGTCMPAAAGEQDLCGPGRVCNATGTCTKGPGEACATAAECTSGFCTDGVCCTSACGNACQACNVPGSIGICAPTAAGQQDLCPLGSVCDNLGACKKSLGQPCQTALDCGSGFCSDNVCCDGACSTSCVACSTAKKGGGQNGLCGPVAVGTDPDDDCAVEIATCGNTGACNGSGACQKRQAGTPCSPASCNGPEILNPVDTCDGQGQCVDTAPQDCGAYRCVGQACLSQCFVDQECLTRAYCSGGTCSLKLPVGQPCTMNKACLSDACLSRVCSNDTDGDGIPDEQDNCPSVPNTSQVNTDANLPGGDADGDACDDDDDADGVLDAVDNCPTIPNPGQESAGPGRPGYACLCNDPPKPDGAPCDDGNGCTLNDTCQANVCRPGPQVECPQPEQAECKQRACEPATGSCVLLHRLDGAPCPEGICIAGGCLDENRWTPGSGGAGVGGEAGSGGSGGMGGHAGDGPGGSANSSGSTSASSGAGESPLRLYGNGCTLTEGRKAPATGAWLLLGLTLAAWTRRRTQPDGARPARPR
>NZ_CP012159.1|WP_050432003.1|5583189_5586960_+|thrombospondin-type-3-repeat-containing-protein
MASSLRLTALSSTRKGFIMRARRRSSYIWTSALLLTAAGLTTNTSLADAPVVVLNPGTLTGSIVFPPGITVTGGTIQGYATDGTYASTSFAGTTYSLVVEGDRNYRVIAYVDVNDGVSTSQLQLNSSGNATTHVPVGQSAQYDIVRDVASIQGSVTVTGGGTVNRIYVWASGSTQVPSESHYNSKYVYNTSTYSLPMVRSNQVGVDAIIDVTRLDGATLSVPVDLQQLDMLAGQTTANWTIDLAALTSGSVEGDINLINPVIGGSPSVRYHYIYLYEPSTGVGMSRTIFNGNHYEFEPLLPGLYSLQAYTYFNDPFGMLVHAPENVYPVNVTAGNVTTMPDYGGQLVHLRGKMNLRGMRSTLSSGTVRAMALPSGRGYGQDSVAVPSGDFDLALTEGTWKLSDYQASFYQYDVNDPSKSLQAQFDVRDNSVADFSLTSNVSPPDQNLSLITSETLVVFDVAEDGANSPPWLISSPSINARYHGAQGSYRYLYGYGAGGESQFPMVRVVGVPGTYQVYPRAYVRREGSSTGSYAEFPPFTLTLNAPRYVGSLAECQGSPPEGAVCGGSFDPFEAFAGGGNPPNPTPSNVLVEFQSDIPDGFHITATRIPVGPTPPLGWKLARVGQDLEGVYFDIMRSVESPLLTTKICFTYDESVYSDEQARDLRPFHWTKSPTDPTVYEWEDMWGGLEICFPGNEPCAPGSVPPNHPDALERFRPDLNQICGMTESFSIFALMTPADADADGVVDHLDNCPTVANADQSDIDGDGLGDACDDDIDGDGIPNDLDLCPLVVDPSQSDIDGDGLGDACDDDLDGDGIPNDVDNCPGMPNPDQSDSNGDGLGDACVTDTDGDGIDDPGDNCPTVANADQSDIDGDGIGDVCDDDIDGDGIPNGADVCPLVANPDQADLDGDGIGDVCDDDVDGDAVGNGEDNCPLVANPNQADLDGDGLGDACDDDIDGDGIPDGVDNCVAVANPGQEDLDLDGAGDACDLDDDDDGVPDALDNCPAEVNPEQDDLDGDGIGDACDLDVDGDGVDDVHDNCPLVANASQQDADSDGLGDACDNCPLAANPAQGDDDNDGVGNACDPVCLTLQRGTNGHVFDTYVAVGEPGYAPGAYTYLYTGLNSSGEKRSLIAFHLGEVPSNATVESAALTVSSEYAASAGTVTLHPISSVWEEATATYANFGDAFEPTAEAALVLPAGSAGPQVADLTALVQTWVDGTRLNYGVLLRESGASKHGFRSSEHPNVGQRPRLDICYVTP
>NZ_CP012159.1|WP_050432004.1|5587096_5587831_-|1-acyl-sn-glycerol-3-phosphate-acyltransferase
MGVNDTLRGILDTARITVPTLVDASLGRLGAEQSDTRLRWWSQKLFRDAEVDLVVRGREHAESAGPLLVMSNHQSLYDIPALYCSVPGRLRMVAKQELFRVPLWGPAMRAAGFIEVDRQNREQAVASLRASVSHLKNGTCIWIAPEGTRSKDGRLGRFKSGGFRMALETGTPILPVAIDGTRHVLPAKGFVVQRKQRVVVTLLPQVDPTVYGVERRKELMRDVRAAIAVALGQDPTDEAHGVSG
>NZ_CP012159.1|WP_050432005.1|5587835_5588258_-|hypothetical-protein
MGKKARTTETTERGQRSGPHSWVIALGTGLLIAPIVLLCASVGACDGGHRFPVCRSNADCAQRDGGPICFSLRCVSCQFDIDCPSGQACSPSNECVALSNARGDDEDAGAVRWDPSNWKECAEACLDEACLQDCSDRFKK
>NZ_CP012159.1|WP_050436021.1|5588290_5588707_-|YjbQ-family-protein
MVFQRTLEFRTSRQGLLDVTREVAAVVAESGVRQGICTTFLQHTSASLVIQENADPAVLRDLERWMSKLAPESDEYEHDDEGPDDMPGHLRSAVTRTNEVIPVTDGRLALGRWQALYLWEHRSAPHVRRLVVTILGAG
>NZ_CP012159.1|WP_156339332.1|5588752_5589592_-|putative-DNA-binding-domain-containing-protein
MLSRAFRKDTSVTDDDALTAHLAEHVAGNSRLTPAAQVDIYRRQFWLRHLGSLQEDYPGLRALLGDDAFETFCRAYLAAHPPASFTLRDLGDDIVPFAELYPDFPPDQEALCRELCRFEHAHIDLFDGAEPPPLDPARLGAMTEDDWSTARVVLHPLLRRFRLTYPVHTLREAARAGRELAVPEPRDVHLLLFRRDLQIRLQEIDPLAYQLLSALARGVALIPACEEIADHATEDDATRLGEHVQRWFAQWASAGLIVDITPAPDAPDHDPGGTRGDVY
>NZ_CP012159.1|WP_050432007.1|5589605_5590466_-|DUF692-domain-containing-protein
MPPSPRPRLGLPDLGIGVGLRRKHHEHVLTNRPQVDWFEIISENYMVPGGRPMVNLDRVLACDYRLIQHGVSLCIGGTEPLDRDYLQRLKTLLRRTGSPWVSDHLCWTRAHGVDLHDLLPLPYTEEVIRHVATRAREVQDFLEVPLLLENVSSYMTYTASEMTEWAFVSAIVDEADCGLLLDVNNIYVSSYNHGFDPAEYVDGIPAHRVAQMHLAGHTNYGEYIIDTHSAEIIDPVWALYRRACERVGPVSTLVEWDEDIPTFDALLAEAEKARAIRDEVERGRAT
>NZ_CP012159.1|WP_156338744.1|5590542_5590803_-|hypothetical-protein
MATKMGKTLAFTAISGLVAGLAACGGSAPPAETPEAPAAADAPAAEGGEKAGCSGAKEGEEKAGCSGAKDGEKGGCSAKNGCSGAK
>NZ_CP012159.1|WP_050436022.1|5591102_5592065_+|hypothetical-protein
MVSCGIGVASCGAATPRAELPGDAPLTEIAAELEALGEPLPPRSRVTFREVLADTLSKDAHLCRPSAREVLLGDAPEGERHIVGMMPHYGLFMGPMSYLIRRRARAWEVEVRIAVTPPSASRLELPDCGLQEEPGAREAMLVCRGTPYARSGSTDACPGSGEFAARATPEVISALLARWSREAERYWNRDAAAFGLPITYDFEFVLASEARARGLRVDLDVPLSATCGRTPYFSAMRSGWSLPVVAHEVGHVMGLLDEYESLSGIVAFYPKTPFAGAEISRMGLSMREHTRVLPLHHYLVLRRYFCSEPGTMDPYAHVVR

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Crispr_ID: NZ_CP012159_24

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012159_24

5707923-5708003

Orphan

Consensus_repeat	Method
GGTCGCTGGTCGGGGTGAACTGAGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP012159_24

>merge|NZ_CP012159|24|5707923-5708003|CRISPRCasFinder
GGTCGCTGGTCGGGGTGAACTGAGCGGAGAGAGCAGTGGCCGTGGGCAGGTGCCGCGGTCGCTGGTCGGGGTGAACTGAGC

>NZ_CP012159|24|21|5707923-5708003|CRISPRCasFinder
GGTCGCTGGTCGGGGTGAACTGAGC	GGAGAGAGCAGTGGCCGTGGGCAGGTGCCGC
GGTCGCTGGTCGGGGTGAACTGAGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012159.1\|WP_169796607.1\|5714615_5715716_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050432063.1\|5701773_5702604_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379155
NZ_CP012159.1\|WP_050432074.1\|5719023_5719434_-\|biopolymer-transporter-ExbD	unknown	unknown	gnl\|CDD\|223917
NZ_CP012159.1\|WP_050432073.1\|5718279_5719008_-\|energy-transducer-TonB	unknown	unknown	gnl\|CDD\|367555
NZ_CP012159.1\|WP_050432070.1\|5712509_5713625_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|379114
NZ_CP012159.1\|WP_050432065.1\|5704892_5705930_-\|PEGA-domain-containing-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP012159.1\|WP_050432060.1\|5697133_5698213_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050436029.1\|5710738_5711713_-\|NAD-dependent-epimerase/dehydratase-family-protein	unknown	unknown	gnl\|CDD\|187545
NZ_CP012159.1\|WP_082362663.1\|5711706_5712456_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|369777
NZ_CP012159.1\|WP_050432075.1\|5719461_5720235_-\|MotA/TolQ/ExbB-proton-channel-family-protein	unknown	unknown	gnl\|CDD\|223881
NZ_CP012159.1\|WP_156338755.1\|5703665_5704475_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379155
NZ_CP012159.1\|WP_156338752.1\|5690365_5690791_+\|Mov34/MPN/PAD-1-family-protein	unknown	unknown	gnl\|CDD\|131309
NZ_CP012159.1\|WP_050432057.1\|5693848_5694703_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_082362664.1\|5715754_5718283_-\|TonB-family-protein	unknown	unknown	gnl\|CDD\|238657
NZ_CP012159.1\|WP_050432067.1\|5708010_5708397_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_156338754.1\|5694884_5696018_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379155
NZ_CP012159.1\|WP_050432062.1\|5699742_5700942_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050432055.1\|5690911_5692522_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050432068.1\|5708618_5710514_-\|phosphoenolpyruvate-carboxykinase-(GTP)	unknown	unknown	gnl\|CDD\|235256
NZ_CP012159.1\|WP_156338753.1\|5692637_5693804_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|240291

Protein	Function_ID	Function_description	E-value
NZ_CP012159.1\|WP_050432070.1\|5712509_5713625_-\|ATP-binding-protein	gnl\|CDD\|379114	pfam13304, AAA_21, AAA domain, putative AbiEii toxin, Type IV TA system. Several members are annotated as being of the abortive phage resistance system, in which case the family would be acting as the toxin for a type IV toxin-antitoxin resistance system.	1.31184e-14
NZ_CP012159.1\|WP_050432065.1\|5704892_5705930_-\|PEGA-domain-containing-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	8.12932e-06
NZ_CP012159.1\|WP_050432073.1\|5718279_5719008_-\|energy-transducer-TonB	gnl\|CDD\|367555	pfam03544, TonB_C, Gram-negative bacterial TonB protein C-terminal. The TonB_C domain is the well-characterized C-terminal region of the TonB receptor molecule. This protein is bound to an inner membrane-bound protein ExbB via a globular domain and has a flexible middle region that is likely to help in positioning the C-terminal domain into the iron-transporter barrel in the outer membrane. TonB_C interacts with the N-terminal TonB box of the outer membrane transporter that binds the Fe3+-siderophore complex. The barrel of the transporter, consisting of 22 beta-sheets and an inside plug, binds the iron complex in the barrel entrance.	3.22995e-17
NZ_CP012159.1\|WP_050436029.1\|5710738_5711713_-\|NAD-dependent-epimerase/dehydratase-family-protein	gnl\|CDD\|187545	cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, subgroup 2, extended (e) SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of archaeal and bacterial proteins, and has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	6.08057e-128
NZ_CP012159.1\|WP_050432074.1\|5719023_5719434_-\|biopolymer-transporter-ExbD	gnl\|CDD\|223917	COG0848, ExbD, Biopolymer transport protein [Intracellular trafficking and secretion].	1.2193e-28
NZ_CP012159.1\|WP_156338755.1\|5703665_5704475_-\|hypothetical-protein	gnl\|CDD\|379155	pfam13385, Laminin_G_3, Concanavalin A-like lectin/glucanases superfamily. This domain belongs to the Concanavalin A-like lectin/glucanases superfamily.	0.00779209
NZ_CP012159.1\|WP_156338752.1\|5690365_5690791_+\|Mov34/MPN/PAD-1-family-protein	gnl\|CDD\|131309	TIGR02256, Uncharacterized_protein_y4qB, integrative and conjugative element protein, VC0181 family. This uncharacterized protein is found in several Proteobacteria, among them Rhizobium sp. NGR234, Vibrio cholerae, Myxococcus xanthus, and E. coli strain ECOR31. In the latter, it is part of an integrative and conjugative element that is readily induced to excise and circularize.	8.09482e-19
NZ_CP012159.1\|WP_156338753.1\|5692637_5693804_+\|hypothetical-protein	gnl\|CDD\|240291	PTZ00146, PTZ00146, fibrillarin; Provisional.	0.00341134
NZ_CP012159.1\|WP_156338754.1\|5694884_5696018_-\|hypothetical-protein	gnl\|CDD\|379155	pfam13385, Laminin_G_3, Concanavalin A-like lectin/glucanases superfamily. This domain belongs to the Concanavalin A-like lectin/glucanases superfamily.	0.00416287
NZ_CP012159.1\|WP_050432075.1\|5719461_5720235_-\|MotA/TolQ/ExbB-proton-channel-family-protein	gnl\|CDD\|223881	COG0811, TolQ, Biopolymer transport proteins [Intracellular trafficking and secretion].	2.51672e-35
NZ_CP012159.1\|WP_082362664.1\|5715754_5718283_-\|TonB-family-protein	gnl\|CDD\|238657	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.	1.03519e-19
NZ_CP012159.1\|WP_050432063.1\|5701773_5702604_+\|hypothetical-protein	gnl\|CDD\|379155	pfam13385, Laminin_G_3, Concanavalin A-like lectin/glucanases superfamily. This domain belongs to the Concanavalin A-like lectin/glucanases superfamily.	0.000681875
NZ_CP012159.1\|WP_082362663.1\|5711706_5712456_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|369777	pfam08241, Methyltransf_11, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	1.30455e-13
NZ_CP012159.1\|WP_050432068.1\|5708618_5710514_-\|phosphoenolpyruvate-carboxykinase-(GTP)	gnl\|CDD\|235256	PRK04210, PRK04210, phosphoenolpyruvate carboxykinase (GTP).	0

>NZ_CP012159.1|WP_050432065.1|5704892_5705930_-|PEGA-domain-containing-protein
MLGKSSLSTPPSRRFSRPLWAATLATALLAPALWSPAAHAADEDPNARATARYEAGQAAAKKGKWQEAYAAFREAWSLRRHPQIALNLGRAALKIGEPREAAERLSFFLRESPELAPGDRKQVEVLLVEAKKKVGTLTIGVNRPNAELFIDGTPLGRAPLGYEVFADPGSHEIEARVPGGGSAKTQVEVQAGSKQHAGLWVMEVDGGSGVTPGGGAAAGGGGLAGSSGGETEAPSSGGGARPYLIGAGIVGTVAGAGAGAVLAVLSLGKASEGQDARDARNQGQYESAERDRVTFANASFYTFIGAGALGLAMVGIAVFGGGSKEGDAGVRVEARGNGLVVRGAW
>NZ_CP012159.1|WP_156338755.1|5703665_5704475_-|hypothetical-protein
MQEMPGDLIDDDCDGTALLNTDVLVRYVINESPSSETPTELMDVAPDPLPLPITFADALAFTEDMNDHRGLTWPARGQGGRAARSIQNTKVATHLDQAQRLTLELVADVTDSDGGSTLTRLFYLGTSDSVDQLSLIPRNDGANLRLYFNDNNADAHTGVQWPVNLHTAGRIVLHVVLDTTKATDSERVTLYRNGSALSPEGTPTWPGENERLNLTGTNSLALGNRPSGGRSIQGTLYYAAVYMRALTSNEVESNAAVLLANDDNHTVDN
>NZ_CP012159.1|WP_050432063.1|5701773_5702604_+|hypothetical-protein
MGEIVPTPEETLGDLIDDNCDGTALVSTDVLVRYVINEPASGQTPTELMDVAPDPLALPITFANGLAFTQDTNGHRGLTWPARGQDGRAARSIQNTKVTTRLDQAQRLTLELVADVTDSDSGSTLTRLFYLGINESTDQLSLIPRNAGENLRLYFNDNNADAHNGVQWPVNLHTAGRIVLHVVLDTTKATDSERVTLYRNGSALSPEGTPTWPGENERLNLTGTNSLALGNRPSGGRSIQGTLHYAAVYMRALTPNEVESNAAVLLANDDNHTVDN
>NZ_CP012159.1|WP_050432062.1|5699742_5700942_-|hypothetical-protein
MTRTAWLLTTTLTGTFGLIALLGACGPFQFDPWDDQETLASGAPDGQGGHGQGGDDTGTGAGGNIQACTPDQSRPCYSGPAGTQNVGRCHPGVTRCGSMGHWGQCIGEVVPTLETSDTAELVDDDCRGTLLADDGVLVRYLINDTDKLNALATLTDSASSPLDLEIARTDKLSFTATFPQVGLRWSTTKDPARAFQLIQGTKVEQALHQTTTVTLEMVLRIEDAKKNARLFYLGPVSGGGGVDQLTLLLEDKTKLRFYLNNKLATHWVLDFPKAKRVVLHLVMDTSLVTASERWQLFRDGQLVGGVVPDSAPAQGTLLDIPPMSYLMLGNTPPKGGCSPKGNIHYAAVYTRALSTPEVEFNARILQRDDDTHVRAQHAGEGDDAENAAAARDDSEVNEE
>NZ_CP012159.1|WP_050432060.1|5697133_5698213_+|hypothetical-protein
MTAVKPPSPSRITSSLAAWWQRLRALEGLLLPPFLLVAALMACKTGRIDIYTCPDPCKECADPCSCPEGTCVPPAPLGWEGPVLLWYGTPADEPECPERAPAPVYEGYRGLKTIPECARCECAPPSCELPQQVSASATDGMCGVPLVTRDFPEDWDGSCLAIDPLMAPESLRVGATRMGACEPVTISVQKASFGWETKAKGCKALRVTGKCELPHEECAPRLETVRDGFELCVFQGGDGRPESPKPGWGPSCPEGYPQARVFYGGVADDSSCLPCSCGAPEGGECDAALTVYEGADCSGDSQMLPSSITNGSCVPYPHQSTLLSVDAVLETSNPGSCKPSGGNLVNGGTLLEPATFCCR
>NZ_CP012159.1|WP_156338754.1|5694884_5696018_-|hypothetical-protein
MHRATRQFEWGLAGAWGLLFAMAACGPFQFQEWEGGTTSGGGSAGFGGAGGSGAGGSDQGGGGSGECMRGAERDCSTEKAGECEAGKQRCLDTGAWEACAGAAEPQPETTDPERDVDCGGTALIDAGLLVRYYINEAASETAPAHLLDATPEPVNLALNYGNGNLSFTEIAGHKALSWSTIDDQGMASASLVGTKIRSALGGATRLTLEVVTNVETTSNNSPRLVALGFNDGLQQFNLYIRNGPSRLRLVMNEQEANTWPLSTPSGRVVLHLVMDTAQPSAADRWRLYRDGQLVPGALPGSPLPEGTTLDLSKPSSLVLGNQLAGSRSFRGKLYYVALYSIAFEAAQVAVNAALLTDNDDDWSLPRETQALVPPSPR
>NZ_CP012159.1|WP_050432057.1|5693848_5694703_+|hypothetical-protein
METSTSDRDQPNRFNSPGVLAMFGGPFAALFGVAFVAASFLDPNTGVLAGILGALALVGGGLTFVWGRRETRRWFAEREARDAAVPAEERLSDRTRREILDVLAVALSGEVVPARHTGWLDGDEVRFAPEAQDHLRIERESLVLVVYHLAMPRRGNVADGGLGIAETGYWRVRALVDTTRTFDIVHRGPLGMTAFWAAQSAKTGDDGFDGSFIVAGQDCAWAAGQVTEATRKVLVADPTAILRGRAGRVEMLWPDGGTMPLTVTRFAQAAEVVSQLAGAVVEGG
>NZ_CP012159.1|WP_156338753.1|5692637_5693804_+|hypothetical-protein
MDAARRTRWTGGVAAAGTLLLVGACHVLSGLDGFEITEGNQASGVGGGGADAASGGAGGNGAGAGGSGGGLGGAGGGEPCAAQDGKRDCYTGYPGTEGVGICKGGTQHCLEDGYWGPCEGEVVPDTETDEPTRDKDCGGTALVDRALLARYFINEAATGTAPAVLRDSAPGPVDLALDYGSNLSFIEAWTNRRGLSWADMNSAGRASASVPGTKLQDALAGARVLTLEAVVDIASISNDIPRLFSLDVGTSERLGLSFLTTPTRVRLSMNEQEASTWPLSFPTGRAVIHVILNTSDPDPAERWKLYLNGQLFPGTRPNPPLPEGTLVDLSQAATMLVGNTVANNGSFRGHLFYLALYVTVFSGLEVELNTGLLLDNDDDWRTPTLGGP
>NZ_CP012159.1|WP_050432055.1|5690911_5692522_+|hypothetical-protein
MAPLYRRLRFPTRAEHLAQFSTYQVRLDHWRPLAAPFEDAFTGVYERGDAAILLIHGAQGSGKTLFCDRLERDFLRAAEGEIEPQRENLWHTLVGGEPMSRDTIREATAGTELHRIRPEEGWLAKQREFARGDRRRKVRVFLLDDAHNEVFLCEFAGVGLDWFRARPRKESEMGIVGSVGQNLVAECRGDFQRSIFLLTSASADLFMSLHQEIERWHARLSVCKELPLPRSDVKETIVRTNTNRLNDVSYWYCLDAAGPDEKKRVHHVLGEQKGFTDSFLAVDDALKSSRRRGAPASRNVITLVTLGAVPPDVKAFLETREVEPSEEYLGTHLGVWYVREQWASAFVEGSVEQARRAELVQSEFALRWVTLDMRGVYALCRPPVTGDLGMKLLDAIQLFPSSTAEQQRHRATYQRLDLELQEPALGMPDLDTFAMNFRTLGQRRNVLYEPAIAARVVDYNKGFEVFPRVRPDLIASEYSPCAVTSARSGSPADINKAIQRMCHAIEFTAFLDHQLKGLDAYLLGKIESYAMLLEQV
>NZ_CP012159.1|WP_156338752.1|5690365_5690791_+|Mov34/MPN/PAD-1-family-protein
MGGRAQHDPHALEAGGVLVGRHIRGSRDVVVDLVTEPMPGDRQSRYSFHRSQKPHQRFLDEIWRTSRKTCVYLGEWHTHPERHPSPSSVDLADWRKRLVKDQVDSESMFFVIVGQVETAAWEGFRGTGRLARLEAVQHAPT
>NZ_CP012159.1|WP_050432067.1|5708010_5708397_-|hypothetical-protein
MRAEATSRWIEPLSDGAAPSDPGRRTAEVVTHDGDIDVLCPCNLGPKGAPVQLAFQAYDHADPPFSIRIKAPSGKVVVERVVRDEALTGRTRGISVDFRPDLAGDYSVEVKQVYGELRGKATLRVRFS
>NZ_CP012159.1|WP_050432068.1|5708618_5710514_-|phosphoenolpyruvate-carboxykinase-(GTP)
MSEATTVQGSRPDLPEIKNEKLRRWIDEVVALCQPDRIHLCDGSDQEYDALCELMVKAGTLTRLNPEKRPNSYLARSDASDVARVEDRTFICSRRRQDAGPTNNWSDPDEMKATLRRLFEGSMRGRTMYIIPFSMGPLGSPYSHIGVEISDSPYVAVNMKIMTRMGKKALEVLGDGDFVPCLHSVGAPLAQGEKDVAWPCNREKYIVHFPEERAIWSFGSGYGGNALLGKKCFALRIASVLGRDQGWMAEHMLILGVENPQGEKTYVSAAFPSACGKTNFAMLIPPKGFEGWKVTTVGDDIAWLKPGRDGRLHAINPEAGYFGVAPGTSMKSNPNAMLTIEKNSLFTNVALTPDGDVWWEGMTDTPPKEAIDWQGNAWTPDCGRKAAHPNARFTAPASQCPSVDPRWDDPNGVPVAAFIFGGRRPTTVPLVYQAFNWNFGVYLAATIGSETTAAAVGNVGQVRRDPMAMLPFCGYHMASYFNHWLQIGREIANPPRIFSVNWFRRDEQGKFLWPGFGENMRVLKWIVDRLHGRAFAEESPLGWMPRYEDIEWKGMDGFTREQFYQLMEVDGVAWKAELRSHNELFEALYDQLPKEFLLMRELLLSGLWRSPETWELDHEHHFDDHHHHHHR
>NZ_CP012159.1|WP_050436029.1|5710738_5711713_-|NAD-dependent-epimerase/dehydratase-family-protein
MVKSFVIGGAGFIGSHLVDRLVARGPVTVYDNLSVGRRDFIAAHLDAGRATLVQADVLDLERLTEALTGHDVVFHLAANPEARWGLTNTRLDLEQGTIATWNVLEAMRRAGVPRLVFSSSGTVYGDTEHVAAEDDLGALPISLYGASKLAGEALISAFTDCFGLRAHVFRFGNVVGPRGTHGAALDFLKKLREHKTELEVLGDGRQAKPYLHVHDCADGILFGLDHPPPDERLPTFNLAPPDVTSVARIAALCIAASPYPEAVIRYTGGDRGWPGDVPRSRMNPGKLAARGFRVRYTSDEAVRLAVEALATEVFPPKSTASGVS
>NZ_CP012159.1|WP_082362663.1|5711706_5712456_-|class-I-SAM-dependent-methyltransferase
MVRIPCITTLWCSLVQRRSPFVSRTTSAPPADLNSTVIRSALFALHHRTVSVPRAERVATALANTIGHAGSLLDIGAGDGVIARDLAQRVGAQRVAGVDVKLRPDPCIDVVHYDGEQLPFPDGAFEIVVLSDVLHHCARPAVVLSEALRVATRAVAIKDHFRFGPLSDKILLAMDVAGNAAPGVLVRGTYFSPADFVALVEEAGGRVADLTWPLRIHDLPFRLITWDRLQFAARIEHAREDAPLTPETS
>NZ_CP012159.1|WP_050432070.1|5712509_5713625_-|ATP-binding-protein
MLTTLEIRGFKAIRETNIIVLGPLTSLFGHRDSGQNAVIEALQWLQDAIVHGLHGATLRQGTTFEGLLHDGARRVAFVMTLGSEEEGETSYALEVATDDAGVPVVRHESCREGSDSVTALLTIHSRQVAGKSCVRGIEGASPLRDPDTLALSFVKKARAPGAERLRDLLQDAVFLRPSYMALGFRERVQPGAGAPVLDDPRRRDEEGRAVVALLRRLTPEVRALVVTEIAQLFPGERGNGALAVGAGDGETLARHEGGTSPQGEAEALQVPSWLLSEGMRWVTALFALLVVRPRPRLIVVQEIERGLDAGALNGVLRALRQASREGIQVLLSSHSPSLLDQMTPEEVIHVQCEEGETVFESVDGLEEVLLR
>NZ_CP012159.1|WP_169796607.1|5714615_5715716_-|hypothetical-protein
MHALRRHVFRTLSLPALALSALTACTPELESRPSQLLAPRLLAVQAEPAEAAPRAPITFRALHASPEGSAFPTIRWAFCIARKPLTEPGTIASTCLRPDDPTLLPLGEGLHAGGSLPEDGCRLFGPDRPPPVAGEPAGRAVDPDLTGGFYQPVRLHLREDGGDTYATYGARITCGVAGATPAQAAELRSRYRANENPELTLAWRHDGIDEPLTPEATEEPTGTPDPGQNPAATVRAGETLSLRAAWPSCPEEPVCGDGLCTLDEDLAACPADCTAPRGCRGAEFYVAFDAQAAAVQRRREGLLVSWFATAGAFDADRTGRTGDEAETTTDNTWTAPDTPGEVRLWLVLRDDRGGTGWQSYRFAVTP
>NZ_CP012159.1|WP_082362664.1|5715754_5718283_-|TonB-family-protein
MSRPLAPRRMDARTLGLAIATAFSALSALAAVPLPASAQPTPTNAAPRLTRPPRVLQFVEAPYPEAEKAAGRAASVVLRIGISATGTVDLVEVVESAGPAFDAAAQEAVRRFLFEPAEIDGKPAAIRIHYRYDFVLRDEPPSPAPAPDPLPEPPAPDDDGPPPTPDGAPLDGPAPSGDVPDDLEIVVTAPVDRKQVVSSEISADEGRRVAGTQGDVLKIVENLPGVGRATVGTGQLVVWGAAPQDTRVYVDGVRVPLLYHHGGLRSVVHSDLVRSVELSPGGYGSPYGRGLGGLVSVQLRPLEDDGFHGAVAADLLDASAMVRASVDETWRFAVAARRSHLDALLPAFTSEDVGVLFPIPRYHDGQARVTHALSDRSSVELGGMLSGDFIDRTVQSADPSQRKRESRSVTWNRAYLRYRHDADDGAVVTVTPWGGTEQTSLTNHFGGTPASLTASTTVLGLRASYRGKPRPFLSTTVGLDAEAARTTLERAGSITAPPREGDIRVFGQPPSDQINVDTWSTVIASAAPFAEADLALFGDRVHVIPGLRFEPYVISGSRRTPREGDTPSIGHATADIVLEPRLAITADLSPRVRVKAAYGLYHQPPQPEDLSAVFGSPLLSTASAHHVLVGALYRLTTTLSTELTAFYSASSGLPARSPLPAPLLAEALVPDGRGRAYGVQILVRKEIASGFFGWITYSLMRSERQDRPASRVRLFDYDQTHVLTAVATYELGWGVELGARFRLASGMPRTPVVGATYDAQRDLYQPVFGPQNTERIPAFVQLDARAAKRFRFGSTELEIYLDVQNVTHRSNPEEIVYSYDYGEKGFITGLPILPSLGARFSW
>NZ_CP012159.1|WP_050432073.1|5718279_5719008_-|energy-transducer-TonB
MPRTSLLYAASIAVHALLAASVLTIKQRERRENIAISVTESKKPPEPPKPIEAPRLPPPPEEKAPPRPAKARTVAEPKAEAPPPEAKAPSPTSAALDALPDFGLSLSGGAGPGLAVPAGGGPPPVAANAAPRPSATTPPPPKALAPRPVDDCTEAVVKPKPKRVPQPAYTASAREAGVEGRVRVEVTVGADGQITGARILSGLGHGLDEAALSAARSGSFEPATRCGKPVSATFVIAMRFSL
>NZ_CP012159.1|WP_050432074.1|5719023_5719434_-|biopolymer-transporter-ExbD
MAGTQPGRGRGGIVGINVTPMVDVVLVLLVIMMVSATYIVSQSLKVELPKTASSDEAVSTLAAVTITKDQQLYFNNEPVTEVQLVQKLREAKGSGTEVNLVVSADEAAPHGRVVHVIDLAKVEGISKFAINVERSL
>NZ_CP012159.1|WP_050432075.1|5719461_5720235_-|MotA/TolQ/ExbB-proton-channel-family-protein
MIVDRLLRVALVGSTWVLYLLIALSVVSFTAMLERWLFFRRHRDDLGKLRSRLAAALRDDDLDGADVALAASRSIEARVVRTALGWRHGGAAAVADVVDSELSETRKDLERGANLLGTLGNNAPFVGLLGTVLGVIEAFRQLGDQGNKDAMGNVMAGIAEALIATGVGLFVALPAVIAYNVLQKKIGDIEAGVNSLSKLVTASLKAREAQGAAAPKKTERAPEASTTTDDDAVPRSSQAHGKIQNGRGTAETAEAEA

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Crispr_ID: NZ_CP012159_25

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012159_25

5851554-5851735

Orphan

Consensus_repeat	Method
TCTGAATCGCAAGCTCGCGAGGATGGAGGCGACTCAGGAGTTCTCTGAATTTTTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP012159_25

>merge|NZ_CP012159|25|5851554-5851735|CRISPRCasFinder
TCTGAATCGCATCCACTCGAGGGTGGATGGACCTCAGGAGTTCTCTGAATTTTTAACTCGGAGGGGTCAGCTCATTCAGGAGTTCTCTGAATTTTTAACTCGGAGGGGTCAGCTCATTCAGGCGTTCTCTGAATCGCAAGCTCGCGAGGATGGAGGCGACTCAGGAGTTCTCTGAATTTTTG

>NZ_CP012159|25|22|5851554-5851735|CRISPRCasFinder
TCTGAATCGCATCCACTCGAGGGTGGATGGACCTCAGGAGTTCTCTGAATTTTTA	ACTCGGAGGGGTCAGCTCATTCAGGAGTTCTCTGAATTTTTAACTCGGAGGGGTCAGCTCATTCAGGCGTTC
TCTGAATCGCAAGCTCGCGAGGATGGAGGCGACTCAGGAGTTCTCTGAATTTTTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012159.1\|WP_050432153.1\|5837690_5839037_-\|HD-domain-containing-protein	unknown	unknown	gnl\|CDD\|224004
NZ_CP012159.1\|WP_050432167.1\|5857613_5858576_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050432151.1\|5835616_5836915_-\|DUF4147-domain-containing-protein	unknown	unknown	gnl\|CDD\|379318
NZ_CP012159.1\|WP_050432157.1\|5847608_5848913_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223594
NZ_CP012159.1\|WP_082363492.1\|5855548_5855962_-\|carboxymuconolactone-decarboxylase-family-protein	unknown	unknown	gnl\|CDD\|223672
NZ_CP012159.1\|WP_050432155.1\|5842479_5846076_-\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP012159.1\|WP_050432169.1\|5859419_5860481_+\|polyprenyl-synthetase-family-protein	unknown	unknown	gnl\|CDD\|173833
NZ_CP012159.1\|WP_050432154.1\|5841932_5842337_+\|CrcB-family-protein	unknown	unknown	gnl\|CDD\|376809
NZ_CP012159.1\|WP_156338766.1\|5836911_5837694_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050432156.1\|5846329_5847598_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237030
NZ_CP012159.1\|WP_050432163.1\|5854824_5855649_+\|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|212492
NZ_CP012159.1\|WP_050432158.1\|5848934_5849849_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379240
NZ_CP012159.1\|WP_050432159.1\|5850178_5851186_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_063796325.1\|5860487_5861585_+\|3-deoxy-7-phosphoheptulonate-synthase	unknown	unknown	gnl\|CDD\|181535
NZ_CP012159.1\|WP_050432161.1\|5852978_5853887_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176163
NZ_CP012159.1\|WP_050432168.1\|5858758_5859313_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224427
NZ_CP012159.1\|WP_050436039.1\|5839824_5841936_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050432162.1\|5853897_5854554_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP012159.1\|WP_156338768.1\|5856279_5856486_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050432160.1\|5851883_5852879_-\|aldo/keto-reductase-family-protein	unknown	unknown	gnl\|CDD\|381300

Protein	Function_ID	Function_description	E-value
NZ_CP012159.1\|WP_050432153.1\|5837690_5839037_-\|HD-domain-containing-protein	gnl\|CDD\|224004	COG1078, COG1078, HD superfamily phosphohydrolases [General function prediction only].	3.0997e-75
NZ_CP012159.1\|WP_050432151.1\|5835616_5836915_-\|DUF4147-domain-containing-protein	gnl\|CDD\|379318	pfam13660, DUF4147, Domain of unknown function (DUF4147). This domain is frequently found at the N-terminus of proteins carrying the glycerate kinase-like domain MOFRL, pfam05161.	3.18143e-68
NZ_CP012159.1\|WP_050432157.1\|5847608_5848913_+\|hypothetical-protein	gnl\|CDD\|223594	COG0520, csdA, Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones].	5.96582e-28
NZ_CP012159.1\|WP_082363492.1\|5855548_5855962_-\|carboxymuconolactone-decarboxylase-family-protein	gnl\|CDD\|223672	COG0599, COG0599, Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit [Function unknown].	2.13959e-21
NZ_CP012159.1\|WP_050432155.1\|5842479_5846076_-\|serine/threonine-protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	7.71548e-39
NZ_CP012159.1\|WP_050432169.1\|5859419_5860481_+\|polyprenyl-synthetase-family-protein	gnl\|CDD\|173833	cd00685, Trans_IPPS_HT, Trans-Isoprenyl Diphosphate Synthases, head-to-tail. These trans-Isoprenyl Diphosphate Synthases (Trans_IPPS) catalyze head-to-tail (HT) (1'-4) condensation reactions. This CD includes all-trans (E)-isoprenyl diphosphate synthases which synthesize various chain length (C10, C15, C20, C25, C30, C35, C40, C45, and C50) linear isoprenyl diphosphates from precursors, isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). They catalyze the successive 1'-4 condensation of the 5-carbon IPP to allylic substrates geranyl-, farnesyl-, or geranylgeranyl-diphosphate. Isoprenoid chain elongation reactions proceed via electrophilic alkylations in which a new carbon-carbon single bond is generated through interaction between a highly reactive electron-deficient allylic carbocation and an electron-rich carbon-carbon double bond. The catalytic site consists of a large central cavity formed by mostly antiparallel alpha helices with two aspartate-rich regions (DDXX(XX)D) located on opposite walls. These residues mediate binding of prenyl phosphates via bridging Mg2+ ions, inducing proposed conformational changes that close the active site to solvent, protecting and stabilizing reactive carbocation intermediates. Farnesyl diphosphate synthases produce the precursors of steroids, cholesterol, sesquiterpenes, farnsylated proteins, heme, and vitamin K12; and geranylgeranyl diphosphate and longer chain synthases produce the precursors of carotenoids, retinoids, diterpenes, geranylgeranylated chlorophylls, ubiquinone, and archaeal ether linked lipids. Isoprenyl diphosphate synthases are widely distributed among archaea, bacteria, and eukareya.	1.75547e-67
NZ_CP012159.1\|WP_050432156.1\|5846329_5847598_+\|hypothetical-protein	gnl\|CDD\|237030	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.	1.50441e-08
NZ_CP012159.1\|WP_050432163.1\|5854824_5855649_+\|SDR-family-NAD(P)-dependent-oxidoreductase	gnl\|CDD\|212492	cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs. Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	2.29033e-34
NZ_CP012159.1\|WP_050432158.1\|5848934_5849849_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379240	pfam13527, Acetyltransf_9, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	1.42432e-07
NZ_CP012159.1\|WP_050432154.1\|5841932_5842337_+\|CrcB-family-protein	gnl\|CDD\|376809	pfam02537, CRCB, CrcB-like protein, Camphor Resistance (CrcB). CRCB is a family of bacterial integral membrane proteins with four TMs.. Over expression in E. coli also leads to camphor resistance.	2.46948e-26
NZ_CP012159.1\|WP_050432168.1\|5858758_5859313_+\|hypothetical-protein	gnl\|CDD\|224427	COG1510, COG1510, Predicted transcriptional regulators [Transcription].	2.47743e-21
NZ_CP012159.1\|WP_050432161.1\|5852978_5853887_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176163	cd08474, PBP2_CrgA_like_5, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding fold. This CD represents the substrate binding domain of an uncharacterized LysR-type transcriptional regulator (LTTR) CrgA-like 5. The LTTRs are acting as both auto-repressors and activators of target promoters, controlling operons involved in a wide variety of cellular processes such as amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to name a few. In contrast to the tetrameric form of other LTTRs, CrgA from Neisseria meningitides assembles into an octameric ring, which can bind up to four 63-bp DNA oligonucleotides. Phylogenetic cluster analysis showed that the CrgA-like regulators form a subclass of the LTTRs that function as octamers. The CrgA is an auto-repressor of its own gene and activates the expression of the mdaB gene which coding for an NADPH-quinone reductase and that its action is increased by MBL (alpha-methylene-gamma-butyrolactone), an inducer of NADPH-quinone oxidoreductase. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.39106e-93
NZ_CP012159.1\|WP_050432162.1\|5853897_5854554_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	9.23344e-09
NZ_CP012159.1\|WP_063796325.1\|5860487_5861585_+\|3-deoxy-7-phosphoheptulonate-synthase	gnl\|CDD\|181535	PRK08673, PRK08673, 3-deoxy-7-phosphoheptulonate synthase; Reviewed.	8.45506e-128
NZ_CP012159.1\|WP_050432160.1\|5851883_5852879_-\|aldo/keto-reductase-family-protein	gnl\|CDD\|381300	cd19074, Aldo_ket_red_shaker-like, Shaker potassium channel beta subunit family and similar proteins. This family includes voltage-gated potassium channel subunits, beta-1 (KCAB1B), beta-2 (KCAB2B) and beta-3 (KCAB3B). KCAB1B and KCAB2B are cytoplasmic potassium channel subunits that modulate the characteristics of the channel-forming alpha-subunits. KCAB3B is an accessory potassium channel protein which modulates the activity of the pore-forming alpha subunit. The family also includes Drosophila melanogaster Hk protein, a founding member of aldo-keto reductase family 6 member B1 (AKR6B1), as well as voltage-gated potassium channel subunit beta (KCAB) from Arabidopsis thaliana and Egeria densa, founding members of AKR6C1and AKR6C2, respectively. Hk protein, also called hyperkinetic, is a beta subunit of Shaker (Sh) K+ channels and shows high sequence homology to aldoketoreductase. KCAB, also called Shaker channel b-subunit, or K(+) channel subunit beta, or potassium voltage beta 1, or KV-beta1, or KAB1, is a probable accessory potassium channel protein which modulates the activity of the pore-forming alpha subunit.	9.54517e-176

>NZ_CP012159.1|WP_050432159.1|5850178_5851186_-|hypothetical-protein
MPQNALLQQAALVNLANAVDAATAYEEHLADAQAIETPQPYRWSIDLVLANIQVAKKFVIRRRARILEQFPLINIAHFDTLGRLALGVKFAALQAEGYGPSESDIKQVLGAARVLRRSLLSAVAAMTHAGLLPREIHAKIARGRGARDAAEDCVALAQVFRQAGTTLDGKHPVTAVEVEQAALAGSWLLEHLRPAAAKPMKPPRPEAVRIRDQMATLLANRYAKLQAMAHFLEGDGWEELVPPLMSRVAPRSRTEPAKKAEGSAQAEGFATAGVAAKAEGSARAGGTTSEATARAERPTSEAAMGPWRSTSLVLPSSEAPPSRPAVVPEQASSPA
>NZ_CP012159.1|WP_050432158.1|5848934_5849849_+|GNAT-family-N-acetyltransferase
MPTFIEHLDRERIIEASRHTHAVWSSGRSLDDHAAYTLGQVERAGPDLFRYVGLVDDTGLVASAKRYSLLLAAPDRRPLPAVGIGAVFTRQDARGRGLASTLIREILREATAQGACAAWLHCEIDPGFYARLGFAELPGVAHHAPAAQLPGDAPLDHRPATPDDMDRLLAWYEESFDDGWLRPARSTALWNYFSFRNSGPAFLLQDGGKDVGYLSADTSHGVMWVNEWSAPGIERPRLLATVRKLAEQHGLADVAGWLRPDQVDGVFSPSPRKSGVPMIHHLAPPWTTEKLDPSRTHFGSFEYF
>NZ_CP012159.1|WP_050432157.1|5847608_5848913_+|hypothetical-protein
MSELDRDALRAAYSRFLATPGRILLTGHSHQAWPDVVRDALGACFDDAARHCDDKWSAAVFPTIQTVGEAVLDRMGFPKDDAIAFGRSTHELLMRLVSCLPIYQRHDPRYGLRHGHEPHDAGLPREGSDPGGPKTERDPYGPKTERDPSRPVRIVTTQAEFHSMRRQLTRLAEEGVDVVWVDASPRERLAERLLDAITPGTDLVAFSAVLFEDAYVLPRLGEIIARAVEVSAIPLVDAYHAFNVVPLDWGPAVAHAFVTAGGYKYAAFGEGICWLRIPQGCTLRPVDTGWFADFGALDAGGGDITYGPGGARFAGATFDPTPFYRAHATLAHWERFGLTPERLRALSLAQTDRILARLDEAGLADAVVTPRDPARRGGFIAVRAPRASDLVTQLRAQGVFVDARGDRVRLGPAPYLTDAEIDRATTLLAAALRA
>NZ_CP012159.1|WP_050432156.1|5846329_5847598_+|hypothetical-protein
MLISVRSSVIPSVLALALLACSKEDTPPPAPAAPVSSAATAPTVEAAPQASAAPAPGQEQAAASLSAAVPEGAAPTASAAAAAAPSASGAALVAPTPSASAGTTPATPAGGGGAPQKVAALVPKAARGILAPGEADRLIKVGGSPVVRLLDPGAAPHATVAYAITPGKYPLGTRMDVNMAVSIGGQAMPSQPMPQLVIVMDVDVAAKDPAGLFPVVGTLRSMSSQAKGADQEEMAKAMQPQLQAFKGLSMSCKLSPSGQARDFALKMPPGVPAEAEQLMSGMSQSFESMVVPLPSEPVGTGARWQVLTRINSTGADIVQSSLFTLKSRTGDQLNLDVKLEQFAASATVNMPGMPPGASAQLLGFKSGGTGMSRIDLEHAVPLAARMSMTSGMDLGVGGGAAGQGGQAHIDMSLSNEIFRPEK
>NZ_CP012159.1|WP_050432155.1|5842479_5846076_-|serine/threonine-protein-kinase
MRARGDYLEGLLDLASHTSRNIRRALFRQSLAALALADALDGPPPLDTLNPEALLRSVRIAMADGLLDDLSWLAPPAAGVAIYEIASALPLGPERRDLARRVLAQLYSGNAATFVAIATRMAASSGRGLSGAGIRARVALVLSLPVSSELAVDPLALALASRRDLARDWICAASTGSLPDRRLAAQLLERAAREATRRATQGDDLPLRLFRNVGERKRRSAEANADSLALAWRTLLEDRETVVWRHIASARGLLAGVLSDIGDDVRDMLAPDLSPAEWRRGAVSVVANIAVEGERGLKRAMELLEGSLPSKDSGLPNAMLWGLYTAADAEPEAAEELLDAIVATSPINCAEGVAGLRRHFGSANASRAGTFGARAAAQCADALVAVAMSAESDDGLVALARAIQSELSTGGGKSAELRDAVEAGVIAFVEGGPRDAHTKAQKAMSLALDVMKSMEKLEVTDRRGPVSSLSRRAAAELVRSLDADVLEPGTLKHLLLLDRRPSDDQSGVPALDDFDERLSKWLIDVEGTFPLRELAAAQEDPSTGRASLPGSDPKAESQAPHQVMHLRNLRALLHLIDSETTDFGEEVERKGRVRARWTTACNLLLRRLGAERASPLRRGIAATVARALDALVRDGVADAADVFLFAAMRAEDPADLEALAEASMHPDVTQLLLAYARFARQPAEDRVPAELFAPPPTLARDPSAHEMATREAARVRHALARLAALDWLVTELPAGASQRTEIVRGTLAKLARSLNAIQGAQALSSLASTITGEASALWLFGDALTRLSQLTEGARRRCGDVPGGEGNGATIGSSGPNSVTEPLRLTNAAEPLRLAVEVTLQHPDETVQNFHPSIQVAIKAARRSIPRALAELIALVLPHIAPLPVRRRNTRDTVSLPDQPLPSWLPSRRIIGGFFVQRSLDGGAQGSVFVVTRAEERHDPHAERLALKVPEYDHTAARSVSEDEFLTLFREEGGSLLALPQHPNLPRFVTFDAAARPKPILVMELVEGIRLDKLLDARGLTMRGALALLDGILAGLETMHAIGVGHLDVKPTNVILRNGREPVLVDFGLAGRHLRPGCASGHYGAPEVWGEVPEGSVGTPMTADIYSFGCLAYEVLTGRTLFDGPSDVALISAHVGHDGLPAPLKKLAGDQRTAEIAAFLFSCLRHNPQSRASASFLREALQRITGLAMDLRWPMDLS
>NZ_CP012159.1|WP_050432154.1|5841932_5842337_+|CrcB-family-protein
MTTAPVWQRLLWICFAGALGSGARFLVSLGAERLGQGQGSFPFGTLIVNVVGSFLICMVMELAAAGLVSPTLRLTLTTGFLGGFTTYSAFAYETLRSAEARQWSITAANLVATLVLGLGAGVLGMICGRKLAGG
>NZ_CP012159.1|WP_050436039.1|5839824_5841936_+|hypothetical-protein
MAKGSVMTEDSPRRLDEILRALPDSELKGLINRMGIRIDAAKRIDVPSQVARALVGLPDVRDPSRLPNASRELLHRIAEGGGVLVVPTLPAGLEPLIARGVVYARKVGKAIELVLPIAFLVQLKSWESEDPRSLRALIAQSSFETMNAIASHYLGRPATPPIALSLESAWEMLSDTAHLQEEVERLAPVEKRLLEAIEAVGGEVETQELLDLEREPMRLRSATGVTASRRGAGFALERRGFLVPIHPNRHVIPTEVVAIVGAERRAQREKRREQIRSFVIEEDHAPRRARFATDPALLALGLAFAVREPGSEVRPGVGTPRSLLVRLGQRFGRDQETVGLIAALSRAIGLWEPSASSPATPPGSLEVHELTQLLFSTWRRGGAWDEARPEREVLRAASESRDASPIGALREMVLDALHDLGEGRWVPWESLQGYLAADERIAGAERLVRRWAERSGVEATAPLEITRRIALETLPALGILDLGGVEDEGSGLALRLTPRGRALVAGGAPSVDGSGSKFIDTQALRIGPTATVAAVLGLAPFAELGRVSAELDLVLTPPSLARALSVGFDSDAVRARIEAVAPLPDTISRILVQASVVIGKASFVGASGFLWVEDAEIRELLRTRRPAAEMFIDPSPPGGLLIEAGVDLERLIRRCRALGVEIEAEVGSLKASRVTPAGGTEAPQRTASTSGMRRTRTPPPRAR
>NZ_CP012159.1|WP_050432153.1|5837690_5839037_-|HD-domain-containing-protein
MILRDPVHGLIDLEGEEAAVVPRLLGAREVQRLRRIRQLGLTSMAFPGAEHSRFTHALGAAHVMRLLLARLRQLDGNLPFWQRVTSERARDAIAAAFLHDIGHGPLSHLFEVAMPGASHHESWTERILLDPSSEVHSILVQHDPYLPQRVAELIRGKHELPYLARAVSGTFDVDRCDYLLRDAHATGVRYGDYDLPWLLRSLRFSEIPTSSGGEGRDAAPTLAIDGAKGLSAIESFLLARCFMFKEVYFHKSTRAAEWMIGAILRRVVERLRDGARIPHVPPGIAVAAIGEMPSLAQYLELDDHVLLNAIHAWEGASDPILADLARRLRVRALFKTIELYPAPDQGNDSTGGAGTGVPDEVAQAALETAREIARGAGLDPDVYVGLDVAEDTPYEEDASLFVVFQQGRPRRPAEVSFLLDRLRNATIRRTRLLFAPELRDAIREALVH
>NZ_CP012159.1|WP_156338766.1|5836911_5837694_-|hypothetical-protein
MRSRVQLVAWWLAAATLVHAAPSAAGEPGVDGAYGRLEGDLSLRGGIGAAFAQGGPSLSAHGAAVFLETAGVYVHYTDAVGQDAPVVTRSFAAGVHLQPLFLARYVSDLERGPARLDLFLDSLALGVGAFWDARRAAFTVPQDVARAAAGRPGLEVALSMSFPLFSEVSGPHVGIRGALRWRAVDLEGRGTGDLVDRGALLSLTFSWHQTVAVHLVDAGDRVDRSGRPGARVARSVQAAPRAVKEDPSPDPSPPRPPGAH
>NZ_CP012159.1|WP_050432151.1|5835616_5836915_-|DUF4147-domain-containing-protein
MSERPAWVESLREAFDEAVATLEAGGLVEQALGEVERPPERVVLVAVGKAAVGMARGAVRCWGDRIRGGLVITTGVPEERDGGVGVPRGATGGLAAMAPRVSGLEVRTAAHPVPDDRSVAAAEEALGLVRGMRPGEELLALVSGGASSLLSAPPVGVSLQEKQALVGAMLDAGAPIQEINVVRRHLSRVKGGRLAAAAAPCGTRTLLMSDVIAGVPHDIGSGPSVLDPTSIDEARAALRRWAPRHAQLTAFLSESPKPAELGEMSRCQVLANPETLAERVAEMLRRRGWRAKTSSAEVGDAEAVAARRIERARELTPGEALVIACEPTVKLPERRGAGGRAGWIALRVMRALPADVALLCAASDGVDGSSGGAGALVRSADAAGIADESITAALRSFDDGPVHRALGTRLAGGATGHNLTDVHVLARALTRG
>NZ_CP012159.1|WP_050432160.1|5851883_5852879_-|aldo/keto-reductase-family-protein
MKHRHLGRSGLLVSEISYGNWITHGSQVEKDAAHACVKAALDEGITTFDTADVYAATRAEEVLGEALAGQRREGLEIFTKVYWPTGPGPNDRSLSRKHIVESIHGSLRRLRTEYVDLYQAHRFDVSTPLEETMSAFADLVRQGKVLYIGVSEWTAEQIERGAALARELKIPFISNQPQYSMLWRVIEAEVVPASEKVGVSQIVWSPIAQGVLSGKYLPGQPPPAGSRATDETGLKFINHFLNDNVLGRVQKLKPLAEEAGLTMAQLAVAWVLQNPNVASAIVGASRPEQVRDNVKAAGVKLDAALLTKIDEILGDVVVRDPKKTVSPAKRP
>NZ_CP012159.1|WP_050432161.1|5852978_5853887_+|LysR-family-transcriptional-regulator
MHTAPFTQLQTFLVVARLRSFSSAARELGVSRAAVSQAVRQLEEQLRVVLLTRTTRSVALTDAGRRLVEGAGPALEQVITAFGDVAARPGEVVGKLRLSVPRSAIPFVVTPVLPTFRERHPRVEVEIVVEERFVDVVAEGYDAGVRLTEAIERDMVQVRLTEAFRFVVVGAPAYLARHGTPQRPEDLLRHECITFRMQSTGALYAWELERGRRTWRVPVRGSVIASDNSVSVALSEAGLGLAYALEPAALPSLDAGRLQRVLEPYAPRVPGFFLYYPSRAQSSPALRLFVEVARELLVRGVR
>NZ_CP012159.1|WP_050432162.1|5853897_5854554_-|TetR/AcrR-family-transcriptional-regulator
MTREKSAYHHGDLRNALIEAATTLVQEVGAEQFSLRDAARAVGVSANATYRHFENKSALLTAVAAAGFVKLSQRMKRKQMATARANHDPVTAAVQKLEALGRTYTEFAVEQPEIFRVMFGSSGICRLLGNPLALPSPTLHELLGEVLDDLVRVGVLPTARRPGAEVKVWTVVHGFVSLLLEGATVTISRAQYTAALEDMLHFTLEGLCAQPRERAHPP
>NZ_CP012159.1|WP_050432163.1|5854824_5855649_+|SDR-family-NAD(P)-dependent-oxidoreductase
MTTALVTGARTGVGFELTRRLLSEGWEVVALVRSDLPPEPFVKEAQGEQRLRVVKGDLSDLGSLKQALREITAREASLDVLFNNAAISTEALRFSPGGRELQFEVNTVVPYILAMELKDLLRKGKLRTVINSSSNAALTVKRFDPATLERPPTFKKLFGPYAASKLALSLWTREAASRFSAEGIEIRSTCPGPNRTPMSAGGGMPWWLLPFQRLTFSHPSKGAARLHEVAFGRFRGEAGVFVNRGKVTPLGFEAEGRAVLERVRAVHEGAFLAA
>NZ_CP012159.1|WP_082363492.1|5855548_5855962_-|carboxymuconolactone-decarboxylase-family-protein
MLGDFAPKLLELTEDVLLGDVWNRPQLSPRDRSSISCTVLIVLGKTDLMKVHFPRAIENGVTQEEIVELITHLAFHAGWPQAITAMMTQGPVRACAPLRPALAGVKPRGTPLHAPRARARARLSPPPRSRAASPCLG
>NZ_CP012159.1|WP_156338768.1|5856279_5856486_-|hypothetical-protein
MAWGGFGRGGGKYTGLIQALLLTAVGLAFLPVHFKGVRPSILFLVPGVFGVLFNAWSLRRGALGQLDR
>NZ_CP012159.1|WP_050432167.1|5857613_5858576_+|hypothetical-protein
MRPNRALLAAAAVAVGGLAVTSARAAVPTPPPQPEAPAPASTGRHCLEETRTKIGMGHNLGGAINPLGAEQMLSLYLCVPLIREPGLFFDLTNVQVGLVNYLSPAYVHQGGYVEITPLSPLVLRAELTGVAMWPFPVRGAGYFAYDGYEDDFQESTRPTDIARSAGGMIVTLSATLRARIGSPRGPGLIVVDTFIADRWSVGDESFSYNMRRDLIVAQQDWVIRNTGALIGEFPVTPDTSLRVGASDWLTTAPASGRVTNVLFGLASVRFLRVTPTVREVSPFVLMGAYTHHASSSQFRTAEPILMLGASASYELASFGP
>NZ_CP012159.1|WP_050432168.1|5858758_5859313_+|hypothetical-protein
MSKPHDMVREAELLAAEAIGDVIEHWGFRRVLGRVWTVLFIAAQALPAAEIGERLQISAGAVSMSLNELLRWGVVRRVWRPGERREYYEAETDFWKMISRVFDERERQLSHSVRERLEKAEELLRRAPDSPEARVSLDRVSRLLAFVKLAQSALDGFIKSRTLDFSRFGDLVRFPLRAVRRPRV
>NZ_CP012159.1|WP_050432169.1|5859419_5860481_+|polyprenyl-synthetase-family-protein
MVSKDVKADDVVATLGDVCAARGLDALTARLAALQTLLAGDLAEVEAALAVVAKNGGTPAHESARHLLELGGKRLRPICVALASHVGSGFTPAALTFAVAVEMIHNATLLHDDVVDLGDRRRGADTARVVYGNAASIFGGDWLLAEALCRVQAAGVEGVLDRMLVVVREMVTAETLQLAARGRVRTSTSEYFKIVQGKTASLFQWAMFAGGRAGGVGTRECEALESYGGMLGLAFQIVDDVLDFAGDPEATGKDLLTDLREGKMTYPLLLAVERDPGLADELEANCRGDEVSVTPEIARRIGRVMSEGGVVQDCLALATRMCRDAAQSLEILPASQARSALQDVALATPLRRK
>NZ_CP012159.1|WP_063796325.1|5860487_5861585_+|3-deoxy-7-phosphoheptulonate-synthase
MIVSLKQGADARAVLGELARRGLWVSQVERGPGGSASHYVIAEHSAHVTPEDLLLIEGVADVSTTKSPHPLLDRQGSSVMVGDVRIEAGARFRPTWMCGPCSVESEAHARDVAAALVPLGVQFLRGGAFKPRTSPYAFQGVGAEALVWLRRAADSQGMKVVTEALSEADAPAVAELADLIQVGSRNMHNYALLKAIGRTGRPALLKRGMAATLEEWLLAAEYLLSSGSSGVVLAERGIRSFDPSTRNLLDLGAVALLSHVHGLPVIVDPSHGAGRRDLILPLSRAAMGAGAAGVMIETHEDPARALSDGPQALRLSELSAIVRELGAAPGVPVTSVSTVAPSSAARAAGAGSIDTWAQAASAEGA

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Crispr_ID: NZ_CP012159_26

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012159_26

6151971-6152076

Orphan

Consensus_repeat	Method
GCACCCGGCGGAGCGCCATAACCTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP012159_26

>merge|NZ_CP012159|26|6151971-6152076|CRISPRCasFinder
GCACCCGGCGGAGCGCCATAACCTTCTGGCGGAGGAGCAGGCTGGCCACCAAAGCCGCCGGGCTGACCATAACCGGGAGGTGCACCGGGCGGAGCGCCATAACCTT

>NZ_CP012159|26|23|6151971-6152076|CRISPRCasFinder
GCACCCGGCGGAGCGCCATAACCTT	CTGGCGGAGGAGCAGGCTGGCCACCAAAGCCGCCGGGCTGACCATAACCGGGAGGT
GCACCGGGCGGAGCGCCATAACCTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012159.1\|WP_050432351.1\|6159100_6159835_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP012159.1\|WP_082363500.1\|6156331_6159019_+\|DEAD/DEAH-box-helicase	unknown	unknown	gnl\|CDD\|223587
NZ_CP012159.1\|WP_082362708.1\|6145564_6147709_-\|IPT/TIG-domain-containing-protein	unknown	unknown	gnl\|CDD\|366832
NZ_CP012159.1\|WP_050436063.1\|6142763_6143540_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|180777
NZ_CP012159.1\|WP_050436065.1\|6148050_6148911_+\|30S-ribosomal-protein-S2	unknown	unknown	gnl\|CDD\|235396
NZ_CP012159.1\|WP_050432354.1\|6162534_6163008_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|340411
NZ_CP012159.1\|WP_050432345.1\|6149947_6150877_+\|polysaccharide-deacetylase-family-protein	unknown	unknown	gnl\|CDD\|200565
NZ_CP012159.1\|WP_050432353.1\|6161671_6162538_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|340411
NZ_CP012159.1\|WP_050432343.1\|6143585_6145565_-\|IgGFc-binding-protein	unknown	unknown	gnl\|CDD\|379980
NZ_CP012159.1\|WP_169796619.1\|6141136_6141835_+\|DUF3592-domain-containing-protein	unknown	unknown	gnl\|CDD\|378822
NZ_CP012159.1\|WP_050432342.1\|6141923_6142496_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378822
NZ_CP012159.1\|WP_050432352.1\|6160009_6161275_+\|PAS-domain-containing-protein	unknown	unknown	gnl\|CDD\|132912
NZ_CP012159.1\|WP_050432340.1\|6138989_6139862_-\|WGR-domain-containing-protein	unknown	unknown	gnl\|CDD\|153425
NZ_CP012159.1\|WP_050432356.1\|6164374_6166480_-\|L,D-transpeptidase	unknown	unknown	gnl\|CDD\|341130
NZ_CP012159.1\|WP_050432349.1\|6153999_6155475_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|173412
NZ_CP012159.1\|WP_050436067.1\|6161274_6161688_+\|STAS-domain-containing-protein	unknown	unknown	gnl\|CDD\|132912
NZ_CP012159.1\|WP_050432344.1\|6148984_6149938_+\|elongation-factor-Ts	unknown	unknown	gnl\|CDD\|236491
NZ_CP012159.1\|WP_050432348.1\|6152383_6153862_-\|TolC-family-protein	unknown	unknown	gnl\|CDD\|224455
NZ_CP012159.1\|WP_050432355.1\|6163171_6164197_-\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP012159.1\|WP_082362706.1\|6139910_6140933_+\|SMP-30/gluconolactonase/LRE-family-protein	unknown	unknown	gnl\|CDD\|225921

Protein	Function_ID	Function_description	E-value
NZ_CP012159.1\|WP_050432351.1\|6159100_6159835_+\|hypothetical-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	4.07002e-13
NZ_CP012159.1\|WP_082363500.1\|6156331_6159019_+\|DEAD/DEAH-box-helicase	gnl\|CDD\|223587	COG0513, SrmB, Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis].	3.85086e-136
NZ_CP012159.1\|WP_082362708.1\|6145564_6147709_-\|IPT/TIG-domain-containing-protein	gnl\|CDD\|366832	pfam01833, TIG, IPT/TIG domain. This family consists of a domain that has an immunoglobulin like fold. These domains are found in cell surface receptors such as Met and Ron as well as in intracellular transcription factors where it is involved in DNA binding. CAUTION: This family does not currently recognize a significant number of members.	5.63992e-06
NZ_CP012159.1\|WP_050436063.1\|6142763_6143540_+\|hypothetical-protein	gnl\|CDD\|180777	PRK06958, PRK06958, single-stranded DNA-binding protein; Provisional.	5.87048e-07
NZ_CP012159.1\|WP_050436065.1\|6148050_6148911_+\|30S-ribosomal-protein-S2	gnl\|CDD\|235396	PRK05299, rpsB, 30S ribosomal protein S2; Provisional.	1.88336e-158
NZ_CP012159.1\|WP_050432354.1\|6162534_6163008_+\|ATP-binding-protein	gnl\|CDD\|340411	cd16934, HATPase_RsbT-like, Histidine kinase-like ATPase domain of the anti sigma-B factor Bacillus subtilis serine/threonine-protein kinase RsbT, and related domains. This family includes the histidine kinase-like ATPase (HATPase) domain of Bacillus subtilis serine/threonine-protein kinase RsbT, a component of the stressosome signaling complex of Bacillus subtilis. The stressosome is formed from multiple copies of three proteins, a sensor protein RsbR, a scaffold protein RsbS, and RsbT, and responds to environmental changes by initiating a protein partner switching cascade. Stress perception increases the phosphorylation of RsbR and RsbS, by RsbT. Subsequent dissociation of RsbT from the stressosome activates the sigma-B cascade, leading to the release of the alternative sigma factor, sigma-B.	8.1845e-18
NZ_CP012159.1\|WP_050432345.1\|6149947_6150877_+\|polysaccharide-deacetylase-family-protein	gnl\|CDD\|200565	cd10940, CE4_PuuE_HpPgdA_like_1, Putative catalytic domain of uncharacterized bacterial polysaccharide deacetylases similar to bacterial PuuE allantoinases and Helicobacter pylori peptidoglycan deacetylase (HpPgdA). This family contains many uncharacterized bacterial polysaccharide deacetylases (DCAs) that show high sequence similarity to the catalytic domain of bacterial PuuE allantoinases and Helicobacter pylori peptidoglycan deacetylase (HpPgdA). PuuE allantoinase appears to be metal-independent and specifically catalyzes the hydrolysis of (S)-allantoin into allantoic acid. Different from PuuE allantoinase, HpPgdA has the ability to bind a metal ion at the active site and is responsible for a peptidoglycan modification that counteracts the host immune response. Both PuuE allantoinase and HpPgdA function as homotetramers. The monomer is composed of a 7-stranded barrel with detectable sequence similarity to the 6-stranded barrel NodB homology domain of DCA-like proteins in the CE4 superfamily, which removes N-linked or O-linked acetyl groups from cell wall polysaccharides. In contrast to typical NodB-like DCAs, PuuE allantoinase and HpPgdA do not exhibit a solvent-accessible polysaccharide binding groove and might only bind a small molecule at the active site.	1.76818e-78
NZ_CP012159.1\|WP_050432353.1\|6161671_6162538_+\|ATP-binding-protein	gnl\|CDD\|340411	cd16934, HATPase_RsbT-like, Histidine kinase-like ATPase domain of the anti sigma-B factor Bacillus subtilis serine/threonine-protein kinase RsbT, and related domains. This family includes the histidine kinase-like ATPase (HATPase) domain of Bacillus subtilis serine/threonine-protein kinase RsbT, a component of the stressosome signaling complex of Bacillus subtilis. The stressosome is formed from multiple copies of three proteins, a sensor protein RsbR, a scaffold protein RsbS, and RsbT, and responds to environmental changes by initiating a protein partner switching cascade. Stress perception increases the phosphorylation of RsbR and RsbS, by RsbT. Subsequent dissociation of RsbT from the stressosome activates the sigma-B cascade, leading to the release of the alternative sigma factor, sigma-B.	5.81033e-29
NZ_CP012159.1\|WP_050432343.1\|6143585_6145565_-\|IgGFc-binding-protein	gnl\|CDD\|379980	pfam17517, IgGFc_binding, IgGFc binding protein. This domain is found at the N terminal of human IgGFc-binding protein and has been shown to confer IgG Fc binding activity. It may play a role in immune protection and inflammation in the intestines of primates.	6.15561e-50
NZ_CP012159.1\|WP_169796619.1\|6141136_6141835_+\|DUF3592-domain-containing-protein	gnl\|CDD\|378822	pfam12158, DUF3592, Protein of unknown function (DUF3592). This family of proteins is functionally uncharacterized.This family of proteins is found in bacteria, archaea, eukaryotes and viruses. Proteins in this family are typically between 150 and 242 amino acids in length.	2.18656e-05
NZ_CP012159.1\|WP_050432342.1\|6141923_6142496_+\|hypothetical-protein	gnl\|CDD\|378822	pfam12158, DUF3592, Protein of unknown function (DUF3592). This family of proteins is functionally uncharacterized.This family of proteins is found in bacteria, archaea, eukaryotes and viruses. Proteins in this family are typically between 150 and 242 amino acids in length.	0.00370708
NZ_CP012159.1\|WP_050432352.1\|6160009_6161275_+\|PAS-domain-containing-protein	gnl\|CDD\|132912	cd07041, STAS_RsbR_RsbS_like, Sulphate Transporter and Anti-Sigma factor antagonist domain of the "stressosome" complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation. The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain of proteins related to RsbS and RsbR which are part of the "stressosome" complex that plays an important role in the regulation of the bacterial stress activated alternative sigma factor sigma-B. During stress conditions RsbS and RsbR are phosphorylated which leads to the release of RsbT, an activator of of the RsbU phosphatase, which in turn activates RsbV which leads to the release and activation of sigma factor B. RsbS is a single domain protein (STAS domain), while RsbR-like proteins have a well-conserved C-terminal STATS domain and a variable N-terminal domain. The STAS domain is also found in the C- terminal region of sulphate transporters and anti-anti-sigma factors.	1.50109e-45
NZ_CP012159.1\|WP_050432340.1\|6138989_6139862_-\|WGR-domain-containing-protein	gnl\|CDD\|153425	cd07996, WGR_MMR_like, WGR domain of molybdate metabolism regulator and related proteins. The WGR domain is found in the putative Escherichia coli molybdate metabolism regulator and related bacterial proteins, as well as in various other bacterial proteins of unknown function. It has been called WGR after the most conserved central motif of the domain. The domain appears to occur in single-domain proteins and in a variety of domain architectures, together with ATP-dependent DNA ligase domains, WD40 repeats, leucine-rich repeats, and other domains. It has been proposed to function as a nucleic acid binding domain.	2.52212e-18
NZ_CP012159.1\|WP_050432356.1\|6164374_6166480_-\|L,D-transpeptidase	gnl\|CDD\|341130	cd16913, YkuD_like, L,D-transpeptidases/carboxypeptidases similar to Bacillus YkuD. Members of the YkuD-like family of proteins are found in a range of bacteria. The best studied member Bacillus YkuD has been shown to act as an L,D-transpeptidase that gives rise to an alternative pathway for peptidoglycan cross-linking. Another member Helicobacter pylori Csd6 functions as an L,D-carboxypeptidase and regulates helical cell shape and motility. The conserved region contains a conserved histidine and cysteine, with the cysteine thought to be an active site residue.	4.45147e-23
NZ_CP012159.1\|WP_050432349.1\|6153999_6155475_-\|hypothetical-protein	gnl\|CDD\|173412	PTZ00121, PTZ00121, MAEBL; Provisional.	0.00100531
NZ_CP012159.1\|WP_050436067.1\|6161274_6161688_+\|STAS-domain-containing-protein	gnl\|CDD\|132912	cd07041, STAS_RsbR_RsbS_like, Sulphate Transporter and Anti-Sigma factor antagonist domain of the "stressosome" complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation. The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain of proteins related to RsbS and RsbR which are part of the "stressosome" complex that plays an important role in the regulation of the bacterial stress activated alternative sigma factor sigma-B. During stress conditions RsbS and RsbR are phosphorylated which leads to the release of RsbT, an activator of of the RsbU phosphatase, which in turn activates RsbV which leads to the release and activation of sigma factor B. RsbS is a single domain protein (STAS domain), while RsbR-like proteins have a well-conserved C-terminal STATS domain and a variable N-terminal domain. The STAS domain is also found in the C- terminal region of sulphate transporters and anti-anti-sigma factors.	1.26631e-28
NZ_CP012159.1\|WP_050432344.1\|6148984_6149938_+\|elongation-factor-Ts	gnl\|CDD\|236491	PRK09377, tsf, elongation factor Ts; Provisional.	1.20181e-100
NZ_CP012159.1\|WP_050432348.1\|6152383_6153862_-\|TolC-family-protein	gnl\|CDD\|224455	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion].	1.89329e-31
NZ_CP012159.1\|WP_050432355.1\|6163171_6164197_-\|tetratricopeptide-repeat-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	3.5277e-17
NZ_CP012159.1\|WP_082362706.1\|6139910_6140933_+\|SMP-30/gluconolactonase/LRE-family-protein	gnl\|CDD\|225921	COG3386, COG3386, Gluconolactonase [Carbohydrate transport and metabolism].	6.43737e-22

>NZ_CP012159.1|WP_050432345.1|6149947_6150877_+|polysaccharide-deacetylase-family-protein
MRGGLAAVSIDLDEVHHYFAIHALTASAGGAHAVYDAALQRIASFASAHDIPVTLFAVGEDLDRPASGDALRALSAAGHAVENHSFHHRYDLTQLPRTQIDEEIARGAEAIARVTGRTPTGFRAPGYTIDDAVFDALEEQGVAWDSSVFPCPTYYGAKAAVLAVQRARNLRSAAILGSPRVLLAPARPYRPGYPWWKRGDRSVVELPIQVTPWARLPVIGTSVGGVGETGARLLALACRGEPLVQLELHGMDFLDASDGLEALRAHQPELHTPVEARMAALSAFVETLTRAGKRFVRLDEAAEALERSV
>NZ_CP012159.1|WP_050432344.1|6148984_6149938_+|elongation-factor-Ts
MAGINAQAIKELRERTQAGMSDCKSALVEADGDMEKAVEIILKKGLAKSAKKASAAATEGEVRASVSSDKRRATLVEVNIQTDFAARNDNFREFVGQVLAAAEKAPAGAELGQLTLDNGKSIADTATELTGRIGEKIDARRWGVVEIPEGKHGATTAYVHLGGKIGVIVSVETSTAEVAAHPEVQKFLEDTAMQAAAMSPVALRREDIDDESKAKQKEIFEGQLREDPKPKPENAWPKIIEGKFNKWYSEAVLLEQESVEAASRGLSGQTIEKLRADAEKAAGGSVTVTHFVRFERGEGIVKKTDDFAAEVAKMAGG
>NZ_CP012159.1|WP_050436065.1|6148050_6148911_+|30S-ribosomal-protein-S2
MQAALTPTQNIVAPGEFPLPLRSLLDAGVHFGHQTKRWNPKMRPFIYGARNGIHIVDLDQTVRMFKRAYDFLTDAVARGGHVLFVGTKRQAQEIVQEEARRAGMYFVTNRWLGGTLTNFRTVKQGLERLRSVERMKEDGTYEQLLKKETVRLEKERERLEKYLGGLKGMGGLPAAMFVIDPHQESIAVGEARKLNIPVVAITDTNCDPDLIDYIIPGNDDALRSIRLITARIADACIEGSHRRRDFGDGHGSQPPPGGRRDDFSVYQGSRGGGRGGRGGDRGPSAS
>NZ_CP012159.1|WP_082362708.1|6145564_6147709_-|IPT/TIG-domain-containing-protein
MLPAVLRRVLQVLSTPRRHASPRLLPSVVVSATLGLLGACIASAPEGIRRQTDQDEDPDLIEPGSPTGERPPLPPTSDPHALLGADPPHGPFTGGQRVLIQGSGFTSSVRVWFGDTEVDPASVIPVDPGRVQVVAPPGSAGAVALTSQNGDDSSTRRSLPGGYTYDALYAVPNAGPVSGGNVIEIYGHGTSWDGSTIARVDQKPCDPLVVDSPEKLLCTVPKGTPGTKTVAVSTGDVSHLVLDGYSYEDSENGFKGGLSGLPLDGKLKVLVFNNFTGDPIPAARVIVGTDLASALVRETDASGVTLIEDASLDGPRTVSIAATCHSPISFVDVPVNTVTVYLDPVLTPACAETFGNPPPVGGNAVSPGLIEGELVWDTIHEFQKGDWLNIPEPRGPNERLAAYVMLVNSDASGSFYLPSPTSAITPDSAGSNGYGFRLYATGSNRALYALAGIENRTVSPPRFTAYVMGAVRGVPVAPGVTTRGVYIAMRKTLDQALVMDISSPSPGPKGPDRIRASVSIMYGNDGYINLPVGVQTPLIPFNGQLSFVGLPALTGDLAGAVYVSTARAVTGPGGLAPMSVVGRLLTTTTSQRVVIDDFVGPPVLQSPAINTNWNGTHLSLTYAGGSPVDISVYDLVSGNGLLRWTVAVPAAAHSIQLPDLRALGLLHGALPSGPVTIGVYGGRVDGFDYAKLRYRDIRPAGMKAYSTDSFNAHL
>NZ_CP012159.1|WP_050432343.1|6143585_6145565_-|IgGFc-binding-protein
MHGRRLAALFFTALIVPSCFDRSVRWDLEEGPPPRPVCDDGEVRCHGWLHQRCELLGAQLTWVTLDDCSTRSFVCGSPELGCVACYPNENACQGQDVVACNADGSFGARVTTCDPSTGAACRNGACPHLCQQAGEQRSNVGCEYWAVDLDNAVIDATSNAAAQQFALVISNPQPDIPVVVRIFQDDGQPGDEPAPLEIASAVIAPLNLRVFKLGPREVDGSPEGEFNTGTHTALTRHAFKVTSDFPVVAYQFNPLENVNVFSNDASLLKPREALAYSGAMGLSYVVASWPQTIAITDDPNTNFSSTNPTNLRAFLTIVGTQADTRVRVTTTTAVVPGGPVAETPAGGVIEATLGAFDVLNLETGDFVADFTGSTIESNAPIAVFVGGEASDAPTFATLASRRCCADHLEEQLDPVRTAGKRFALAHSPSRTVAVKAAGAQIDPIPEPEYVRFVAATANGATIRTTLPAPDDVLTLTGRGSFREVTAYRDFMAESDEPVLVAQVMASQDAAGVRTGLPGGDPSLLIFPPIEQFRPDYVFLTPDKYAFDFVTVIAPPDALVTLDGATLGPEYCEVTPADGLTATERGRSTPPLIVYRCQLSFPVIDPQKTSPDNVLPGQQNDGVHRVLASVPVGVIVTGFDTYVSYAYAGGTELKTIAPPQ
>NZ_CP012159.1|WP_050436063.1|6142763_6143540_+|hypothetical-protein
MLVGCGGDDGGSGGSGGSGGGGEGGSGASGGAGGDGGTGGTGGEGGGEADLATLYRNAVADAAVAEESEIVDTLTPISLANVDLERDNMGRVLMVTWTSYDGYDNIIGTDTGLGPDVWVTPGRELQAFCRSTGLQGDALNLRLEQRMGLPPNNGKNRIVELWVDADDMFRPSPDPEIDDTRAELDFPNGTPQEHIDWIEHQKSISYGENGYPWTRLGYTYDWNPEASSVVGESEFVIRKLSNVGVHSVTSQDEYCQAL
>NZ_CP012159.1|WP_050432342.1|6141923_6142496_+|hypothetical-protein
MSALSDLSPSTGSSGPYREAHLRVPRAPRAPSALARELIFACHGSRKTQLFAGAVLLVLGLVVSLLSGLEPASGGDFLNDHPLLFYGVGWSVGGVSLLVLGFRARSAQERAFRHGLPAPGRLLRRDFDKATSIGNKHPFEVVWEFDAHGTTHIGRLSHLDRSLVERALEGKELTVLYDPADPSANTLWID
>NZ_CP012159.1|WP_169796619.1|6141136_6141835_+|DUF3592-domain-containing-protein
MSAHGARGASLWVGGAFLVIGTVMSTVFCWRLPMDVALDVSGVRVQGTVVRTEVNHSVSINHRNPTEITFSYRVGRSTYEATSSTLESQMILAAREGAVVPVQVFPLVPAWARVQGTTASSFGYFGALTLIFPSLGTVLMIAALRGLRRNQRAFTHGIPTTGLIVKRGPNTSIRINGSHPYQIVWEFQVDQHRYRGSVSHMNAQLLGRVLPGPEVTVLYDQHEPSINTVWFE
>NZ_CP012159.1|WP_082362706.1|6139910_6140933_+|SMP-30/gluconolactonase/LRE-family-protein
MRRVVSTLPRPSIEPVVWHAPPAPARATQRASQEPLPPLTLLPLPGSGPEDVVVDAEGWIYTGLGDGRILRVSPDGSHIITVANTGGRPLGLEILPDGAVLICDPHRGLLRLDPATRALQVLVDRVDGRPLRFCSNVTAARDGTLYFTESTQRFGFEHWKADILEHTGSGRLFRLDPQGKVEVLLQGLHFANGVVLTHDETAVLVAETGRYQLTRLWLRGPREGRREVLVENLPGFPDNMSRGLDGRIWIAMANGRDPMLDRLLGLPPIVRKVVWALPEKLQPDVTRTTWVLAIDEEGTIVQDLQGPGEQFHMVTGVAEAPGMLVLGSLAESALAVLRRG
>NZ_CP012159.1|WP_050432340.1|6138989_6139862_-|WGR-domain-containing-protein
MRRFEFVQGSSAKFWMTDVQGNAFVVVYGRLGTSGQRKEKDFPSPDAARREMEKKIAEKLREGYQEVSATAAAAAPAGAKGAAAAAAPLELPPRLVQREATPERIQAAIESLNGLAAARGRRSWALNRRLQHARRALERIAGVVPSAHPALERALDGVLERVIAPRAGDRVPLVGALQLLLQVDASAFAKVMDGLWKLPPPGHPTAPALKLASEQLGALNDPELSLRIIALLLSRPAAPATGWSLRWRKISPHLEAYLARSGSSLKKYLGSIDPSGDPHLTGRIEAMRAG
>NZ_CP012159.1|WP_050432348.1|6152383_6153862_-|TolC-family-protein
MRRRSVASSLLATSLLVLTAPALAQPASAPTIGAQPDRAQPPAAKPPQADPTGTFAAPSSTGVSQELSGLRPLNIDDPDLKSVPPATRVLSNWRDAVTLVEARSPDLVIAIQEIARAEGLARQALAQALPAINASGTINQSLIPGTSFVPGVGLVEQRLTQLNTGISISQPLLAPRVWYGVGTAKLQTEIARMTAEDQRRVTFATVATGVVNVVTAERVSEINRVGLRGSLELLELTRRRADLGTGTKLDVVRAEQDVAAARSQIVSADESLRKTREALGLALGFKDAYGVEPNLSLNDVESSLRTLCSPGDIGSRPDVRAARAQLDLTARSVTDAKLAFAPTATLSSNTTVSHVVQSEFTNTQWSIQALLTIPLWDGGARYGMLKSARAQVEQQKERLGVVERAAAVELTQASRGIEVAEQSRRVATAARDLAAETTRLTRVAFEAGTATSFELVQTQQQLRQRELELALQEFEVVRAKISSLLASANCQH
>NZ_CP012159.1|WP_050432349.1|6153999_6155475_-|hypothetical-protein
MGWNGEQRVGRRRGPGTGKLSLAALALAAAWPARASADSLPTNDYALDLFQGPILAPLRVTGISGAYAGYAEGIPGMVVNAAAPALREPFSIGWVDYDIGGSISIPLEMFENNDFDNSGTRDADYSNFIYGTFGAMLQIGPFGAGANADISRYSLEFGGQRSAVTLGRYHILAGMHFFNGQFVVGGGARAVTLGIDAPEATLTLAGIAPQFGFMVRPDWSSWRFGATYRMPVDGGTFRLGDDQAVSVGGVRRAGALVLPDRAVLPWELELGLAIQVGPRPLNPQWLNPLEEERALREERAAARAARDARWVEELRDAETPEARQEIEKRHADLRRREAAREEAVLTRSYNALKEDRRTRAKNWPREHLLLTAALLVSGPVHRGVSMEWFLRGNAPDEPSKVGTSGAAVNFSPRFGIETEPIPNLIATRLGSYYEPSRFGRVGRQHFTFGADLKMFSTTFWGLVPEVTYSLRAAMDFAPRYESVSLGLGVWR
>NZ_CP012159.1|WP_082363500.1|6156331_6159019_+|DEAD/DEAH-box-helicase
MTDPSALPTLNGPENLVASSQQPQDEGPARAARDVTQEEGRTPAEADQQEAAPSIASAPDDLAGASPGSPPPEAPTFDVLPLSAELRETLAEIGYIHPTPVQLAVWEPATRGRDAMVQARTGTGKTAAFGLPIVDHIVKRSNQNAQVLALCPTRELALQVSGEIERLGRRKGIRVTAIYGGAPMQRQIDAIAAGAQVIVGTPGRVLDHLRRGTLSPKHIRHLVLDECDEMLSMGFERELSAILAELPPERQTLLFSATVPPDIERISKQRLRNPEFVTLSSDAVGALSIQHFVYLITGDKSGSLLRILEIENPESAIIFCNTRDETEAVTASLRRHGYDAEWLNGDLPQSDRERVMTATRQGRLRFLVATDVAARGIDVSHLTHVINYDFPQDSESYVHRTGRTGRAGRTGTAISLITPQDVGPLYLLRLVYKIRPLERQIPTEGELKTRAEADLVNLLAEAFLPKGTHADDLALARRILTHDQADVIVAGLLRDHLGARPTVKDEAGTARRAALPRPTPTVAAKPAAGVPERHPTERGPSPSRSPETPSVEPRERPRQVEPRVDVRGGREAGSTVREPRPAPPVPVRSPSAPVGEEGGHPVEKNFTQAAPVAPRRGFESGPRRVDPQEPVSPETERSRDRDPERRERAERRGGRQDEYRRRPGEGREGRDDQPTSMTEPPATRPEPVIRPLDRARLVGDAAERSGERRRDRSEPRVEDAVPPSKSAAPPSAPPGARRSPSRAEAQQERPLTRHADFITWQPPEEEGDDEPILAESHAAPQAARHDAGEPPAATPTESDLFGEIYVNIGRRDGARAADFQRVLVERGEISKDDVGRIRVRERNAFVSVRRVELMRALDALNGATIAGKEAHAEVARGRSPGGAEADDSSTPPEAS
>NZ_CP012159.1|WP_050432351.1|6159100_6159835_+|hypothetical-protein
MVRSGSSETERLRRDVERALSADVDADAVLSLLARLARASAPGSENWVFAHRHLAERGVEREPWRASLFARRVVAVDPADDGAWAVLGLAQSLLGNYRYAVRAYRRAVTLAPSNPWYAHNLGHLLDCALHCPEEALPLLSRATEAQPDEPEIATSYAHALARCGKLPLAKKILKRAIRRGATADQMTLLRWLEAGAPAAGLGDAGRAESKRKTKRRRSRGGTQQRQGPAGLSGATPVCDEHVGE
>NZ_CP012159.1|WP_050432352.1|6160009_6161275_+|PAS-domain-containing-protein
MSEELLKQEISGLKARVQELEQLLAGQDAASQQQSTRLEQAVADARERSEQLERSEDELRRQADILRLVLDSMTDGVAVVNDRGDLLLVNPAAERMLGAVASPIVAAQAAEPALFFPDGETALPEEAHPLALALKGEMVDQLEIFTRAPRPTPLSTEGEPRSARVADPVHHGEGLHLTVTANPMRRRDGSISGAVAVFRDATEKKRLIEDLESRNREFSDNEQIKSELVERLRLAIDEISTPILELWDDVLALPLIGVVDSHRSMQIMERLLEEIVHRQSRHVIIDVTGVEIIDTRTADYFLKLFKAVALLGARCRITGVRPAVAQTLVELGIELGGVRASRNLKHALRDILRDASIFSARQPHGHRNGFPFDGQGGPPEHRTHGRLPKGYGRAGRSFASHSDGSSSDPGEQRFLSKETSS
>NZ_CP012159.1|WP_050436067.1|6161274_6161688_+|STAS-domain-containing-protein
MQASRVPIVGLFGNLIVSVQGGLTDGQVEQLREDVTGSIESRSPRGLIVDLSGVEILDSYLTRAIRDIALTARLMGVRTAVCGLRPAVAIALVEMDLEIPGVVTALNLERAVEMLAPADDDDLPDDLVSEVPNEEPS
>NZ_CP012159.1|WP_050432353.1|6161671_6162538_+|ATP-binding-protein
MKSPPEGPPSSGSRGPPSHTGPLSRSVQGSPSSHSHTGPLSGRGSGTIAPTVAPTSARSGPPPSFRGGSTQPTRLGVIGITDRIEGVLAQFLSPAVRKSVIDCGVRQARVDRDSMREADLRRLLVEVKRGVQLFVRDQVQLERCVSQLNELDYAAPAPREILVDVRTEEDVLRARSAGRELCIEQMVSDVLLTKIVTAISELGRNIVRYAGSGEISVRSIMSPQRAIEICAKDQGPGITNLAEILSGKYRSRHGMGAGLRGTKALMDEFDIQTGPGKGTVVTVRKLLG
>NZ_CP012159.1|WP_050432354.1|6162534_6163008_+|ATP-binding-protein
MSSPLPSFTLPVRREEDRFACAAEGVRIARWAGLSDRAQQELAIAIAELVSNAVRHAGGGEIEVRAIRGVPPNPNPSIASPVDKNPRLGVEVIVRDSGPGIDPKLATATEESSSTPVPRLPGQGLGIGLGAVHRLMSSVVIRSAPGISTEVVAIKWA
>NZ_CP012159.1|WP_050432355.1|6163171_6164197_-|tetratricopeptide-repeat-protein
MDQFSAHLDRGWELVQRGDTRGAEASARRALELDPNSPEAHNLLGFVAAMEGEGEEAIEAYRQAIALDDTYLEAMLNAAEVYIHPMGEYDQAIDMCDQALELAEVDEEVIDALLLKFDALLGKGDLDEASRVVARIPESPYDNPNHTFLVGRANYEVGQVDKAAALIEEAVKKDLRHAEAHYYLGLIRDERGDMRGATQAFLRSRELDVELGMPPWAPSREGMAQIAQRAIGVLNPVLRRYVEEAEVYVSDVPGMELVAEGVDPRALVLLDGIASEERERGHRGPVDNRPCARVFVYALNVARLAGNVDGIEREITLALEREITATFLEAEQAERSEKELN
>NZ_CP012159.1|WP_050432356.1|6164374_6166480_-|L,D-transpeptidase
MNRTQAPRPPTPRDPARPSSASGGQGNTRRVNPRDPRATAPAPAPDENVRARSSLVSSAAGFVVASVLAGAVAWGSGCHGEAPPGPSTEKPQRQNALPAPPAPTTSVALPSPSPASSGEPHAAAPESAAPSAAPTSEAVAEAPKEEEEEKPYTGPLLGAQWIQTPVYPTMEFSNKRVGYIRRGGKVPVDPKPLKGGNCAKGWYRLLDGGYVCGKYSTLDMSDPQVRLGVTPPNLDDLLPYKYAYNNAHGTPLYRSVPSREEMNRYEPYLEAARKKKKEQAEKKKAELAKKEAEKKASDSEGVGGSSASATGKDAVVAVAIASAGVSEGSGGDSATPRKPEKDKDAPLPTGALPSGDGPGSAGTPSSGVDDKTAAAAAAASLGLGLAEPPPETEDDKPWWQRTYDKDKPLSITLADLDKDADGPVAKRMVKGFFVAIDKSFGWNDRLWYKTTSGLVAPSDRMYVIKPPGSQGSDFPEGARQVGFILSTKASKYEVDAEAGKVKVTGSIARQAAFGLTGESVTVKTVLYRKTTDGWWMRDKDGTYAEPGTKPSDLATGEKWVDVNLTRKTLTLVEGDKPVFAALISPGKRSSNKKKDHPTKPGVFRIREKHIAAVMDGDGTAAGDLPYSIEDVPFVAYYDGSYALHGAFWHSDFGRERSHGCVNLAPLDAKRVFMWTEPRMPRGWHGVWSTPQKPGTLISIHD

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Crispr_ID: NZ_CP012159_27

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012159_27

6492131-6492218

Orphan

Consensus_repeat	Method
CTTCGCTTGGCAGGCAACGCCGTTC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP012159_27

>merge|NZ_CP012159|27|6492131-6492218|CRISPRCasFinder
CTTCGCTTGGCAGGCAACGCCGTTCGCGTGACGTCGAACGCGCTTCACGTGCCGTCGAACGCGCTTCGCTTGGCAGGTAACGCCGTTC

>NZ_CP012159|27|24|6492131-6492218|CRISPRCasFinder
CTTCGCTTGGCAGGCAACGCCGTTC	GCGTGACGTCGAACGCGCTTCACGTGCCGTCGAACGCG
CTTCGCTTGGCAGGTAACGCCGTTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012159.1\|WP_050432551.1\|6489237_6490248_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_082362727.1\|6502643_6502988_+\|pentapeptide-repeat-containing-protein	unknown	unknown	gnl\|CDD\|224276
NZ_CP012159.1\|WP_050432546.1\|6479097_6481560_-\|type-VI-secretion-system-tip-protein-VgrG	unknown	unknown	gnl\|CDD\|274542
NZ_CP012159.1\|WP_156338829.1\|6500680_6500857_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226425
NZ_CP012159.1\|WP_156338824.1\|6476282_6479033_-\|DUF2169-domain-containing-protein	unknown	unknown	gnl\|CDD\|370755
NZ_CP012159.1\|WP_050432550.1\|6487672_6488173_-\|CHAP-domain-containing-protein	unknown	unknown	gnl\|CDD\|377495
NZ_CP012159.1\|WP_169796634.1\|6492989_6499655_+\|VCBS-repeat-containing-protein	unknown	unknown	gnl\|CDD\|274730
NZ_CP012159.1\|WP_156339338.1\|6504908_6506252_+\|L,D-transpeptidase-family-protein	unknown	unknown	gnl\|CDD\|341130
NZ_CP012159.1\|WP_050432547.1\|6481587_6484053_-\|type-VI-secretion-system-tip-protein-VgrG	unknown	unknown	gnl\|CDD\|274542
NZ_CP012159.1\|WP_050432548.1\|6484099_6486559_-\|type-VI-secretion-system-tip-protein-VgrG	unknown	unknown	gnl\|CDD\|274542
NZ_CP012159.1\|WP_050432557.1\|6501161_6501422_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050432544.1\|6475255_6476305_-\|pentapeptide-repeat-containing-protein	unknown	unknown	gnl\|CDD\|224276
NZ_CP012159.1\|WP_156338828.1\|6499662_6500223_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050432559.1\|6503066_6504464_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_156338826.1\|6490259_6491084_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_156338827.1\|6491116_6491296_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050432561.1\|6507084_6508143_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050432549.1\|6486920_6487391_-\|CHAP-domain-containing-protein	unknown	unknown	gnl\|CDD\|377495
NZ_CP012159.1\|WP_050432560.1\|6506339_6506744_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050436085.1\|6501817_6502525_+\|S1-RNA-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|223613

Protein	Function_ID	Function_description	E-value
NZ_CP012159.1\|WP_050432546.1\|6479097_6481560_-\|type-VI-secretion-system-tip-protein-VgrG	gnl\|CDD\|274542	TIGR03361, VI_Rhs_Vgr, type VI secretion system Vgr family protein. Members of this protein family belong to the Rhs element Vgr protein family (see TIGR01646), but furthermore all are found in genomes with type VI secretion loci. However, members of this protein family, although recognizably correlated to type VI secretion according the partial phylogenetic profiling algorithm, are often found far the type VI secretion locus.	2.28592e-121
NZ_CP012159.1\|WP_156338824.1\|6476282_6479033_-\|DUF2169-domain-containing-protein	gnl\|CDD\|370755	pfam09937, DUF2169, Uncharacterized protein conserved in bacteria (DUF2169). This domain, found in various hypothetical prokaryotic proteins, has no known function.	6.63671e-89
NZ_CP012159.1\|WP_050432548.1\|6484099_6486559_-\|type-VI-secretion-system-tip-protein-VgrG	gnl\|CDD\|274542	TIGR03361, VI_Rhs_Vgr, type VI secretion system Vgr family protein. Members of this protein family belong to the Rhs element Vgr protein family (see TIGR01646), but furthermore all are found in genomes with type VI secretion loci. However, members of this protein family, although recognizably correlated to type VI secretion according the partial phylogenetic profiling algorithm, are often found far the type VI secretion locus.	2.61502e-122
NZ_CP012159.1\|WP_169796634.1\|6492989_6499655_+\|VCBS-repeat-containing-protein	gnl\|CDD\|274730	TIGR03696, tRNA_nuclease_WapA, RHS repeat-associated core domain. This model represents a conserved unique core sequence shared by large numbers of proteins. It is occasional in the Archaea Methanosarcina barkeri) but common in bacteria and eukaryotes. Most fall into two large classes. One class consists of long proteins in which two classes of repeats are abundant: an FG-GAP repeat (pfam01839) class, and an RHS repeat (pfam05593) or YD repeat (TIGR01643). This class includes secreted bacterial insecticidal toxins and intercellular signalling proteins such as the teneurins in animals. The other class consists of uncharacterized proteins shorter than 400 amino acids, where this core domain of about 75 amino acids tends to occur in the N-terminal half. Over twenty such proteins are found in Pseudomonas putida alone; little sequence similarity or repeat structure is found among these proteins outside the region modeled by this domain.	5.54039e-19
NZ_CP012159.1\|WP_156339338.1\|6504908_6506252_+\|L,D-transpeptidase-family-protein	gnl\|CDD\|341130	cd16913, YkuD_like, L,D-transpeptidases/carboxypeptidases similar to Bacillus YkuD. Members of the YkuD-like family of proteins are found in a range of bacteria. The best studied member Bacillus YkuD has been shown to act as an L,D-transpeptidase that gives rise to an alternative pathway for peptidoglycan cross-linking. Another member Helicobacter pylori Csd6 functions as an L,D-carboxypeptidase and regulates helical cell shape and motility. The conserved region contains a conserved histidine and cysteine, with the cysteine thought to be an active site residue.	2.17646e-27
NZ_CP012159.1\|WP_050432547.1\|6481587_6484053_-\|type-VI-secretion-system-tip-protein-VgrG	gnl\|CDD\|274542	TIGR03361, VI_Rhs_Vgr, type VI secretion system Vgr family protein. Members of this protein family belong to the Rhs element Vgr protein family (see TIGR01646), but furthermore all are found in genomes with type VI secretion loci. However, members of this protein family, although recognizably correlated to type VI secretion according the partial phylogenetic profiling algorithm, are often found far the type VI secretion locus.	2.57981e-122
NZ_CP012159.1\|WP_050432550.1\|6487672_6488173_-\|CHAP-domain-containing-protein	gnl\|CDD\|377495	pfam05257, CHAP, CHAP domain. This domain corresponds to an amidase function. Many of these proteins are involved in cell wall metabolism of bacteria. This domain is found at the N-terminus of Escherichia coli gss, where it functions as a glutathionylspermidine amidase EC:3.5.1.78. This domain is found to be the catalytic domain of PlyCA. CHAP is the amidase domain of bifunctional Escherichia coli glutathionylspermidine synthetase/amidase, and it catalyzes the hydrolysis of Gsp (glutathionylspermidine) into glutathione and spermidine.	4.33724e-09
NZ_CP012159.1\|WP_156338829.1\|6500680_6500857_+\|hypothetical-protein	gnl\|CDD\|226425	COG3910, COG3910, Predicted ATPase [General function prediction only].	5.77448e-16
NZ_CP012159.1\|WP_082362727.1\|6502643_6502988_+\|pentapeptide-repeat-containing-protein	gnl\|CDD\|224276	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown].	1.67931e-12
NZ_CP012159.1\|WP_050432544.1\|6475255_6476305_-\|pentapeptide-repeat-containing-protein	gnl\|CDD\|224276	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown].	3.20511e-28
NZ_CP012159.1\|WP_050432549.1\|6486920_6487391_-\|CHAP-domain-containing-protein	gnl\|CDD\|377495	pfam05257, CHAP, CHAP domain. This domain corresponds to an amidase function. Many of these proteins are involved in cell wall metabolism of bacteria. This domain is found at the N-terminus of Escherichia coli gss, where it functions as a glutathionylspermidine amidase EC:3.5.1.78. This domain is found to be the catalytic domain of PlyCA. CHAP is the amidase domain of bifunctional Escherichia coli glutathionylspermidine synthetase/amidase, and it catalyzes the hydrolysis of Gsp (glutathionylspermidine) into glutathione and spermidine.	4.92621e-05
NZ_CP012159.1\|WP_050436085.1\|6501817_6502525_+\|S1-RNA-binding-domain-containing-protein	gnl\|CDD\|223613	COG0539, RpsA, Ribosomal protein S1 [Translation, ribosomal structure and biogenesis].	4.68193e-15

>NZ_CP012159.1|WP_156338827.1|6491116_6491296_+|hypothetical-protein
MTLANVSLQQPACSDQVQPGGLRSLSLSWLLDEPGACTPRGGSPTGRVDAEGPTTFCCL
>NZ_CP012159.1|WP_156338826.1|6490259_6491084_+|hypothetical-protein
MHHSRAKRSRSATWSALIALAAFTTLLPAACKTGRVMIYTCPEPCETCDDPCHPCIEAKGECVPETLFGWVGPVLLWAGRRDLEPPPCPEHAPTRMYYGYDGLTIERGCPSCSCGPITCMPPSTMAARDQPVCTGDGPSDDDLHLPVPETWDGACQDVPAIAEADMAALVASEARVGVCKPNLGMVPASDAFAWDFHAMACERKRIPRTCHDGVQWCAPQAEGTFASVSIPAEMSRIALPAIRSGACSSTGSTGPSRAPPARAKRLRSVPAKES
>NZ_CP012159.1|WP_050432551.1|6489237_6490248_+|hypothetical-protein
MTSKSLQLLASLGCLVALVTCGRADEQCEGPCCAGACDPCRDGRCDDKDALGWEPPVLLWWGDAGAPAPGCPAWAPEVVFEGVDGLSAKQECPSCSCGPAACKLPAGMVVWNEFMCNAHDVPDPEFIPYLAPDPWDGSCVTRETIPKDTFRSLQFLSTTLSPCSPITGPEPVVAEPVWETQARACGAGKIAPEDERPPEAPLTPAGFKECLWRQGEPGPCPADHPDRRMFYREIETSLTCTACTCGEPTDASCIALVRLFLRPECDMTPGQWSGMAMDLVRSPCTGTLGGTMSLSIGSMNAMWYEQQPGRCEPAGSEPIGEVWANEQTTFCCAEAR
>NZ_CP012159.1|WP_050432550.1|6487672_6488173_-|CHAP-domain-containing-protein
MKWLAKCSAIALILGAGSFTALGCAVEMDPEEGLELGIEEAEATEAFDDEVEAIGEDGQEIAIGTDTSSATCNQCSNCVLYARCRQPKLPFGLTTYAQKRAIINTQTAKAGYVAIINSGSSYGHVAYVTKVNGSTITIAEGNWPNGKCGTRSGTKAGLKIVGYFKP
>NZ_CP012159.1|WP_050432549.1|6486920_6487391_-|CHAP-domain-containing-protein
MKWFAKCGASALVFAMSAFVWSGCAVDVDAGDELEAAELGEAVETDDQELAIGDGDTSNATCNQCSNCVLYARCRQPKLPFGLNTYQDKLNIINTQTAAAGYVAVINSGSSAGHVAYVTSVSGSTIHIAEGNWPNGSCGTRSGTKAGLKIQGYFRP
>NZ_CP012159.1|WP_050432548.1|6484099_6486559_-|type-VI-secretion-system-tip-protein-VgrG
MADVDFSFACEVDRGAAGAWSHLEVVRFQGRESISELYRYELTLAVKAPHPEVDPRDLLGLRATLRIATGSVPTFKVVHGIVVEAEELFEAPDAMLYRVVLSPPWARALHRTRCRIFLDKTVEAIVDAVLQGDPRVTRRDGAEVDEDVGGPSFTPATEQYTWRVQATGRIKDARVRPFVVQYNESDFAFVSRLLEEEGISYHVENGQEACLLVLADDDGGRARIAGGPLAANVLGREVAALRLGGRLRPEGVALAEYNWKKPQLAMGVSAGEGAADALLEVHYPGGYPDGPEQGAPLALARLQRFQVEARYAVGEGAVRVLSAGSVFALEHDESTHEGEFLVTQLDVRGEQQGVLAQASNAQEKPWAARFELARRGEGARVEASHFRPALRTPKPRIQGTQTAVVTAAPGASGAEVNVGGPDGLAVGCVHVRFRWDSDTARLAKEPSSAWVRVSQVFAGPGQGAVWHPRVGDEVIVAFEEGDPDRPVVVGRLYNGANLPARVGGHESSMKSLSTPGGGTYNEIMFGDAAGSELLHVFAGKDQATDVANYRREGIAANASMIVGADNTETIGANRTESVGSNDSLSIGVNQTITIGGNSTAIIGANHTHTVGANEVNLVGGAQLVQVGGNQVETVGGVVTETYGAARITTVGGAVTEDFGSIMSVSVGGNVTESCASHALEVSAARLMAIGGNYTTVVGGASTLGVGAVLIDASAGPQDLTVSGNIVRSAPVHLTTAAFEHDIKGGKISAAGSSLSINVVSLEALGMSRSVTGVKKSKSYVSESADGFKKDGAGMIIKLAAVGMLASGVDHQGGGPDVEG
>NZ_CP012159.1|WP_050432547.1|6481587_6484053_-|type-VI-secretion-system-tip-protein-VgrG
MSNRDFTFACEGVEGGLDAWSALEVVRFHGREAMSSAYRYEIVLLAREAAGMGDVQVSALPGKSASLRIATGSIPAWKVVHGLVDEAEELAALPEGRTIRVILAPTWTRATWRRRSRIFLEKTLRDIVDAVLLGDPRVQKGSGEAPAPEQGDPGFSPAREAFAWRIQDPSRLDDRRVRPFVVQYNESDFAFVARLLEEEGIAFHVENGADTSLLVLSDADTGRTRLAPAIVSAAIKEREVRTFFSGGRLRPEGVALGEYNWKQPELPMAMQAGDGGAALFEQAYPGGYPDQAGQGKLLAEARLGRYQTEARFARGEGELRVLSAGTIVALEHKKARHEGEYLVTALEVRGEQSGVLQSQADASMIEPFAVRFTCARRGEGAAVRESGFRPARTTPKPRILGTQTAVVVAAPGAQGAEIHVGGPDGIDVGAVRVRFHWDTDEARLAREPASAWVRVSESFAGSGMGGVWHPRVGTEVIVAFEEGDPDRPIVIGRVYNGVNQPHGGGAPELSTFKSDASPGGGAHNEITFDDSAGAERIYLNAGKDMETDVGNDRSETVGACASMVVGANDDEQIGGSCSVSIAVNETVTVGGNDTALIGGNVTTTIGGNSLTMIGGSEAHLVGANQVITVGATRTENVGGSVLETIGASLTTTVAASESEDVGADRATTIAGAHTQSFGAAHIKLVGGNRDASCADLQTDVGAAAVRIVAGNIKTEVGGNHALTAGGVAAFLTPHYSASDANRSDINDAKFKIMMHNVTVGGISLGATGLATSTTGVSLSATGLNLEYSGVQIDTYGLLTRIDGAHLQTKGVKLRRAFIIKL
>NZ_CP012159.1|WP_050432546.1|6479097_6481560_-|type-VI-secretion-system-tip-protein-VgrG
MSFDDFVFGWESKGGALGSWGGLRVVRFGGEEPMSGVFRYEVLLLAATGDDDLDPLSLVGRRASLRISTGSQPAFKLVHGVITEAEDAAEVPEGAVYRVVLEAPLARARHRKRSRIFVDKTLRQIVETVLRDDAGMKLVSGAMLDAPVGLPSYRPAEERFTWRIGKGARLDNPKARPYVVQYNESDLDFVSRLLEDEGVSFHVEHGDEVSLLVLSDTDAGRPRVADDDVLGPGKDAREMRHFRLGGRLRAKAVRLGEHNWENPALDISAEAKDGGDGDLAEHVFPGSFLESQELGLPLAQARLDRLHTEASFAVGEGSTRVLSAGAIFTLEHPKDRYEGEYLVTRLRVEGHQDGVVSVQVDGGGGEPFHMELECACRGRGKGVKESRFQPARVTPRPRIVGAQTAFVTAEPGTSGAEVNLGGAASLGSVRLQFHWDTDAARRAKEPSSSWVRVSQPFARGGQGGLWHPRIGTEVIVEFEEGDPDRPVVTGRVYNGKNRPPQTAPTHSSLWSLALPGGGVRNEISFEDTAGSERIYVNAGKDVTVVVGNERCENVGANALMTVGGDNTEQIGASQTVSVGANDTLTVGGNQTEIIGANQVRVIGGNRAMIIGANEVRTTGANHVNMVGGSLVEGVGGSVVESYGASRSTSIAAGWIEGYGATRTQTVGALAFQNYGGNQTTTVAGSRNIQAGAMQGVLVGGSVKTEIGGDETIDVGAAAIHVAAGPITHTAANLDIDAPVQIHLVGLKLNLFMVRMSATGRSSAFTGVSASAKGTSMGLNGVNLKTVGLRSTAEGAKLDENGVRLVAIGVLIHPSGMHTYT
>NZ_CP012159.1|WP_156338824.1|6476282_6479033_-|DUF2169-domain-containing-protein
MKLGVLTRTFELDHKYYFVPTILVLCDLGAERRLLPEVDLWRLSAAELGKEAILDECMPKQRGEFLVHGRCYTAGAVPRTAASVRAKVGSLDKSLYVIGDRVWRRDGVPGEATPFTEMPIRYTRAFGGEGYALNPTGIGVAPVKGEDGREVHPLPNIEHPKALVQSRSDRPAPAGFGPYELLWAQRWPKMGTYDRKWMREQLPGFAKDMDLTMWNAAPEDQQLPAGFFEGGEAIYLENLHPERPRLEGRLPGIVGRCFVTQRSAEGEAFHEIPMRLDTVQIFPHLERVALSFRGLWRVAEDDADDILHLLVACDDTAERRPLEHYREVLKRRLDPKREASEVFRDGDLVPPNIGGGGGGGDIDAMFELTRRENHLQKNLAERARREAEKVRAEVIAAGGDPSTVPDAEGPKVLSAPTFEELPGFVERSERELEEAQRKMDAAQEKLVADTRKRYAEAGRDYDAAVAKSKKEGAGPPKFSADKEMERLRDIQTLCQNANVATPDLDATLADPKTEARLRQAEEEAREAYLSGAHLAEYRPARLEEPARSELRRRVAEAHAAGRSLSRQDLSGADLSGMDLRGVDLTEAFLENAVLARANLAGARLSRAVLAGSDLTEVDLSGADLSEANLGASYARGARLDDVTLRGAVLSQADFTGASLHRVSFEKADLSDVVLDGASLTLSRFDKCILKGNQLRGCDLRESTFSHAILAEVDLRSANLAHVTLEHAALVRCTLDGASFLKADLRGIRLAEPCSFVGADLTGAMIDGATLRETDFSRADFTGASLNSSDMSKCVLREANLYRVVAKNVMLSRADLTGARLVAANLEGAVLLKAKLGRADFTGANLFRADLLRAVGDDRTCFTDANVTQVRVSPREGGGPGKPATVDPQAQQQAEQANAKKDQESAKKESHGQERPR
>NZ_CP012159.1|WP_050432544.1|6475255_6476305_-|pentapeptide-repeat-containing-protein
MDKSALVDLVKSGEVVSEVDLSGLDLAGVDLSGGIFEKVSFRGADLRGSLLKEVLFSGCDLDGARMAGVNLRHATVSGSVLRGADLEHGYMGVTKFHECDLTEARFVGADLVVGGFAHCDMTRADLGEANLDRAGIVECVVPGLRLAGANLKQTTLYKAELVGADFTGARFDNTLFIAAKLQGMSFAGMDLTLSQFIEADLTGASFEGAIVRQCNFMKAILEEARFDGAQAQQVIFVEARLDRASLQKAALNRSLFSDARMPLADLSGSAVGESIFHRAQCEGAKFVGCDLTYADFSHADVSAADFSGAKVFRTRFHRVKDEATLWCSRVAALGDEAEVAESEDWNPPY
>NZ_CP012159.1|WP_169796634.1|6492989_6499655_+|VCBS-repeat-containing-protein
MSASSSQHAFRFVSASSPHTPRRRPFPRALLLLIAVLVVGACSDAGSLLLWSSTSQALWEASPSPPIPPLLCLGPDDGPSPFPPDLAQGPTAAAGTLPGSFSVTSTGEATYTIPVPTLPGRAGVEPSLAIAYDSALGEGLLGIGFHLQGLSSVDRCPRNVAQDGHIAAVRDAEDDALCLDGQRLVPVDPQPGRAPREYRTFPDSFTRVEADFAESEGWPAERGPKRLRAHSKAGLIYEYGGESSGRVLAREQVVRSWLLTRLSDRDGNTMEVVYRNDLHAKGYTVEHAPQRLTYTGHPRVPASRTVEFTYGPLESADVRVLYARGMELRRSLSLRSIQMFGPGQVLARELRFGYGHGPATGRLRLEAVRECGGDGTCKPPTRFTWHTAGAAGYMQQQTPVEVPLSERGTLMTMDVSGDGLDDLVTSDMVVEAGTEQPITRWSVALNRSQELTPAFFEAAASGQEQPHFIDGEPPYQPELGTPLDYDHDGRMDLFLHDVHGQALTWEVLLSDGDGTFTRRDTGVPRPFTMGMTPAGLRSPDASTHLVDVDGDGMVDLLQCYQSAHEQLWYLHRWTAAAGGFAPHGDRVHTLTPYPCHAELHAIDIDADGRVDLVMQELVLVGSQVRAGSQYVAFSYELSDGAWTRALTGLRLTPPGDRVFFLDVNGDGLPDAVQSNRDDEQLYTSMNTGAGFVDPGPSLATPTLGAARFVRFASVLDHNADGRQDLLLAMSDGGSESLPAWKVLQATGKVGPGTFEVVHPGLPMGIVLQQDELPTPDHPLTPRVTDVNGDGAQDLLYAFNNQVHVFENVLGQEDLLAAVTDGMNAHDPEDAEYLPNVQIRYDHLIDRARTTAGFEDTTGIPSPEQRTYRPLEHSDEDQCRYPVRCVVGHRRVVSGYVLNNGADRPRTFQVAYRNGRHHRLGRGFLGFGTRIVRDLDTGAGTAEFYDNVTFDGAFQAFPFRGQVQRSWRWSPSLPLDAHSAEPVSVELLTTRSYPALIPTQAGTYFTLSLLEGKSRHQGTFSPGSGKTLEEAVRALEGDLASRMSDTLRTVSDFDLYGNILAEQTQTDGVDLELSVTRTFENDPLSWRLGELTRETTCSKAGGETQCRVMHRSYDARGHVRLERVGGEPFDPEMQLDVWFSRDALGNIHSTRSRDGTGQVRATCTSYDALGLMPHAHRNLEGHQSYTRYDPALGVLRASVDPNGLVSRWAYDGFGRVTLESLPGRMPTSIRRTWTKDGGAAGNAWNLKVRTSSVGGQDETVQFDGLGREVRWWWQALDVGAEQAPRMMQEVGFDARGEHLAWRSLPIADPAPPGSVQLRETWSYDGMGRVLRHVTPWGAETTHEYVGRDEVITAPGQAVTRIASDPLGRPMAVGDPEGGGTRYTYGPFGGLRTVTTPAGATTLTERDAFGRVRRQLSPDRGVSTAHYDGYGQKISSLDAAGREVTTSYDTLGRIYRQVDEDGVTEFRWDDAQHGIGQLALVVSPGGHRLRYGFDHVGRPATTTLELGGESFTSRLSYDLSGRLKRIEYPSAPGIGSFAVEREYDPYGRLRALKDAGSGAEFWRATAIDAGNRITRERFGGGTATTLRTFDAARERVSRIETQASGVHVQQLSYLWNDRRKLVERSDGIHANVERFRYDLLDRLTCAQFGLINAALCQRPFTYGPDGNLLQKPGVGAYEYDPAQPHAVARAGGAFYGYDAVGNQTSRPGATIAYTAFDLPKRIALTSGDTVDFEYDGLQQRVRKTTATQEVVSFGELYERVTDVVTGAVEHRYHVRNDERVISLVRRSAAQGTRTLHVHADHLGSIDVLTDGMTGTVAEQRSYDAFGAPRHPDWGSGQTASPHELSSLGFTGHEADLDLGLVNMKGRIYDPKLGQFLTPDPLVPRPLFGQSWNAYSYVLNSPLSLVDPSGFQEQPPATEDGCSQGCTVWVFGPPREPKPPAPPKVVEGNLEEAAGAGSTQTPVDVGTSGVRGGWSPQLPATLQALGRGDAIARRIMDGVRIGMARMLLESAKLGILGGASRVYVAYTTITAAWNGYKESGIPGALDAVNPASQMVEAGVEAYEAAAAEDWESAGASLFKAGSIGMSILATAVGVGGALTATVGSTAKAAGRAGARPTGGVPNPHGSRGGPAHRATIERRIDELRTQGHQHVGGGSLPEEVIPTPGGSKTFRRPDITMLAPDGRMYRENVGRSANGGHPVARELRALDDIEAATGQRPGYTPYDR
>NZ_CP012159.1|WP_156338828.1|6499662_6500223_+|hypothetical-protein
MASKSKQAFILPDEFFALLAELTSSMNLVVVLQRRRSLREAWDGDRHALAGTVRVFLAVAGTVDSGSLTDESAPSRLGWVMADVPNIEDEKLFAIQVGARGDWFDKATGMVCENNEALKQFGRVWKKFAQRLRFPTRARNMTTEAESSYASIGYSAGAADWFRHGNRLRQRGVENIEFLIPETMSG
>NZ_CP012159.1|WP_156338829.1|6500680_6500857_+|hypothetical-protein
MLLVIATHSPIVMAYPDADIYLFPPEGIEKVRYEETQHHQLTRDFLLHRERYLEQLCK
>NZ_CP012159.1|WP_050432557.1|6501161_6501422_+|hypothetical-protein
MSEAASPIAETLAAVVKEFLAKGSRFAQTKPVILETLRRLGPHRRDELKTEQAVLRAYYAMFKNGTLHWGYDANNPGPPFFHVADE
>NZ_CP012159.1|WP_050436085.1|6501817_6502525_+|S1-RNA-binding-domain-containing-protein
MKRPMPQDPKESFASLFEHGTGGVRPSRRHQVGDQIEVTIVAITREAIFADLGGKQEGVFERPALSTPDGAVQVEIGSRVSAQVAGFDKETGQARLKPLVVRAAPDGSAPQKAAGPVLVEGSHIKGKVVSIERFGVFVQIQGAPPRSGRGLVPTAETGTPRGADLRKAFTVGQDVEAKILSVDEVGRIRLSFAALKSDAERKEFESFAKGTKKEQNANPRSLGTLGDLLSKRGKR
>NZ_CP012159.1|WP_082362727.1|6502643_6502988_+|pentapeptide-repeat-containing-protein
MNRSELRKRRASGEHDLRGVDLSGADLRGFDLRGADLRGADLTEADLHSTDLRGAVLAQSSFDGARLTGARMDASTCERSGFSPDQVEALRRRGVEFIPLETLARPEPDRALDS
>NZ_CP012159.1|WP_050432559.1|6503066_6504464_-|hypothetical-protein
MRPWVVDALVRGHFVAWFLVAVLWTLVTAILLFPRREGRAPSTLRVLVQLTAGAAVSLAGLLLGDALSIPHVRWRIDADSPLSPPPSSFEAPASWRTLQGPAIRVTVDGQPDIALPALDGRGRWILLGLLSGRALDGLIAAPDLPPEDGQPRLCTVVDDASARPTCRAWPPSWPEPTPASELRDLRWSRSPLGAIAFDDGTARYLLPPRTPDLATLEFIGDPTASAAQNPHANTPLVQLRRISHEHFAAVRVVQLYPPASPPFQIQRAAAAFTAPTRLHALLPVLFLGVLALPLGGLAYLLAPVWFARHLRRRRALRRELDTPLTLDPLLPGGPADVALDHGIHLCAVRDDADLGDALLPRGALVPVAPGVADDEPFTARSWYELPAPRGSASTETPPYPDSAVRHEERGALRRVGLLVPADPPAFRRAARAWLSVRLSPVAMLLAGLSTAVPAAIAVASLLAQR
>NZ_CP012159.1|WP_156339338.1|6504908_6506252_+|L,D-transpeptidase-family-protein
MRTWIYVAPDDRSTKLGYLRAGAVVDRAELSAGTTGCAGGWYRIAPRGYVCVGKGASLALDHQVVAAAGRGPLRGEPAPYHYVISKSPAPHLYFRLPSRQDQERTEGSSLGVHLARMGGPRDLPLDPVPEFLSAGRDLPKPYGAEEKLHYSVHTGRAKESSAYGLATAFEWTGRLFGLTTELDLIPLDRTKPARSSQLRGLVVTPAQWAVVESPPQVSVDVKFEPELKGAAAIVKSYGAALMRPDDRGEFESAGLAGHRSGWLLTGRTHGGRRGLLETAEGSWIGEGSLVISPRRDDPQGYSKSGRKWIDVSIKRQMVVAYEGDRTAFATLVSTGRGGMGDPKTTHATMRGVFRIHTKHVSTTMDGDDEATEAFDLRDVPYTQYFHEGYALHGAYWHDEFGKERSHGCVNLAPADAAWLFDWTEPSVPLEWHGAINIDGGTLVWVHG
>NZ_CP012159.1|WP_050432560.1|6506339_6506744_-|hypothetical-protein
MVPFALTGCFAVALVVGCKKDEDELPVPVATTTTTTTTTTTMELAVEEDAGVDAGEDAGADAGKTIVGTGDPTGVRRCCQALRQNAASAPPEQKGAYLSAAAACDGLVNSPQGRQALGTLRSFLLGAQLPASCQ
>NZ_CP012159.1|WP_050432561.1|6507084_6508143_+|hypothetical-protein
MSNAQKLFPSIGSVTSSGARRMEGSTVYSLQALIRKNASMAAIAGDSYAALPASRAEDDSGMIDFRALQAQQHEVVQHLDVFPLGVPPGRHAMADAASKGMATARSPALRGAVGAWVTGSIIAGLGIAVAVGMRSSAEAHGPAAATGVAAAARAAALPVQTASWSDGAREARGSKAAMKRSSKRFTSSTGRRAPGPGVSQAPGAAGSMGMAGGVAGGMANAASGTMGVEMGVEMGRAMVSATGTTSSATRGETAGTPGATAGSGPGMKGVQAEPVAALSTAPTGPVAALSRSPAGQHAGGTSGVVGSKPGTGGENAGSASTPEKAGNQVVAEKVVDACQGDLMCAMQRAVKR

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Crispr_ID: NZ_CP012159_28

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012159_28

6879697-6880022

Unclear

Consensus_repeat	Method
CCCACCCTCGATACTGCACCAGNAA	CRT

7 spacers

cas3

The CRISPR arrays of NZ_CP012159_28

>merge|NZ_CP012159|28|6879697-6880022|CRT
AAGCTTCCCCCAACGGCACCAGCAGAGAGGGGTGGCAACGCTCCCCACCCTCGATACTGCACCAGCAACGACGCCCAGGAACGCTCCCCACCCTCGATACTGCACCAGCAAACGTCAGGGGGAACGCTCCCCACCCTCGATACTGCACCAGCAACGACGCCCAGGAACGCTCCCCACCCTCGATACTGCACCAGTAAAGGCCAGGGGGAACGCTCCCCACCCTCGATACTGCACCAGCAAAGGCCAGGGGGAACGCTCCCCATCCTCGATACTGCACCAGTAAAGGTCAGGGGGAACGCTCCCCACCCTCGATACCGCACCAGTAA

>NZ_CP012159|28|5|6879697-6880022|CRT
AAGCTTCCCCCAACGGCACCAGCAG	AGAGGGGTGGCAACGCTC
CCCACCCTCGATACTGCACCAGCAA	CGACGCCCAGGAACGCTC
CCCACCCTCGATACTGCACCAGCAA	ACGTCAGGGGGAACGCTC
CCCACCCTCGATACTGCACCAGCAA	CGACGCCCAGGAACGCTC
CCCACCCTCGATACTGCACCAGTAA	AGGCCAGGGGGAACGCTC
CCCACCCTCGATACTGCACCAGCAA	AGGCCAGGGGGAACGCTC
CCCATCCTCGATACTGCACCAGTAA	AGGTCAGGGGGAACGCTC
CCCACCCTCGATACCGCACCAGTAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012159.1\|WP_169796650.1\|6869590_6869956_-\|DUF4398-domain-containing-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050432801.1\|6882354_6887652_+\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP012159.1\|WP_050432798.1\|6876715_6877843_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|214802
NZ_CP012159.1\|WP_050432795.1\|6873482_6874775_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|367618
NZ_CP012159.1\|WP_082362775.1\|6887920_6890020_+\|histone-H1-like-repetitive-region-containing-protein	unknown	unknown	gnl\|CDD\|173412
NZ_CP012159.1\|WP_050432799.1\|6878644_6879514_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|227135
NZ_CP012159.1\|WP_050432804.1\|6897410_6898757_-\|acetyl-CoA-carboxylase-biotin-carboxylase-subunit	unknown	unknown	gnl\|CDD\|236307
NZ_CP012159.1\|WP_050432796.1\|6874843_6875998_+\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|99738
NZ_CP012159.1\|WP_050432797.1\|6876008_6876719_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_063796346.1\|6877865_6878636_+\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|99749
NZ_CP012159.1\|WP_050436115.1\|6892157_6892484_+\|ribosome-assembly-RNA-binding-protein-YhbY	unknown	unknown	gnl\|CDD\|376702
NZ_CP012159.1\|WP_050436112.1\|6881810_6882065_-\|septum-formation-initiator-family-protein	unknown	unknown	gnl\|CDD\|368217
NZ_CP012159.1\|WP_050436116.1\|6898770_6899235_-\|acetyl-CoA-carboxylase-biotin-carboxyl-carrier-protein	unknown	unknown	gnl\|CDD\|235777
NZ_CP012159.1\|WP_082362777.1\|6890998_6891787_-\|arginyltransferase	unknown	unknown	gnl\|CDD\|234939
NZ_CP012159.1\|WP_156338859.1\|6896953_6897391_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224511
NZ_CP012159.1\|WP_156338858.1\|6869006_6869435_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237864
NZ_CP012159.1\|WP_179955478.1\|6872630_6873161_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|240291
NZ_CP012159.1\|WP_050432793.1\|6870135_6872496_+\|DEAD/DEAH-box-helicase	cas3	mkCas0139_cas3_CAS-I	gnl\|CDD\|274800
NZ_CP012159.1\|WP_169796651.1\|6880386_6881751_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377474
NZ_CP012159.1\|WP_050432802.1\|6892501_6896287_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|235832

Protein	Function_ID	Function_description	E-value
NZ_CP012159.1\|WP_050432795.1\|6873482_6874775_+\|hypothetical-protein	gnl\|CDD\|367618	pfam03712, Cu2_monoox_C, Copper type II ascorbate-dependent monooxygenase, C-terminal domain. The N and C-terminal domains of members of this family adopt the same PNGase F-like fold.	1.32004e-14
NZ_CP012159.1\|WP_050432801.1\|6882354_6887652_+\|serine/threonine-protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	8.07763e-44
NZ_CP012159.1\|WP_050432798.1\|6876715_6877843_+\|hypothetical-protein	gnl\|CDD\|214802	smart00752, HTTM, Horizontally Transferred TransMembrane Domain. Sequence analysis of vitamin K dependent gamma-carboxylases (VKGC) revealed the presence of a novel domain, HTTM (Horizontally Transferred TransMembrane) in its N-terminus. In contrast to most known domains, HTTM contains four transmembrane regions. Its occurrence in eukaryotes, bacteria and archaea is more likely caused by horizontal gene transfer than by early invention. The conservation of VKGC catalytic sites indicates an enzymatic function also for the other family members.	8.45941e-09
NZ_CP012159.1\|WP_050436116.1\|6898770_6899235_-\|acetyl-CoA-carboxylase-biotin-carboxyl-carrier-protein	gnl\|CDD\|235777	PRK06302, PRK06302, acetyl-CoA carboxylase biotin carboxyl carrier protein.	1.13868e-61
NZ_CP012159.1\|WP_082362775.1\|6887920_6890020_+\|histone-H1-like-repetitive-region-containing-protein	gnl\|CDD\|173412	PTZ00121, PTZ00121, MAEBL; Provisional.	1.09177e-12
NZ_CP012159.1\|WP_050432799.1\|6878644_6879514_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|227135	COG4798, COG4798, Predicted methyltransferase [General function prediction only].	1.15768e-46
NZ_CP012159.1\|WP_050432804.1\|6897410_6898757_-\|acetyl-CoA-carboxylase-biotin-carboxylase-subunit	gnl\|CDD\|236307	PRK08591, PRK08591, acetyl-CoA carboxylase biotin carboxylase subunit; Validated.	0
NZ_CP012159.1\|WP_050432796.1\|6874843_6875998_+\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|99738	cd00614, CGS_like, CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.	5.97202e-153
NZ_CP012159.1\|WP_063796346.1\|6877865_6878636_+\|Uma2-family-endonuclease	gnl\|CDD\|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	1.23675e-08
NZ_CP012159.1\|WP_050436115.1\|6892157_6892484_+\|ribosome-assembly-RNA-binding-protein-YhbY	gnl\|CDD\|376702	pfam01985, CRS1_YhbY, CRS1 / YhbY (CRM) domain. Escherichia coli YhbY is associated with pre-50S ribosomal subunits, which implies a function in ribosome assembly. GFP fused to a single-domain CRM protein from maize localizes to the nucleolus, suggesting that an analogous activity may have been retained in plants. A CRM domain containing protein in plant chloroplasts has been shown to function in group I and II intron splicing. In vitro experiments with an isolated maize CRM domain have shown it to have RNA binding activity. These and other results suggest that the CRM domain evolved in the context of ribosome function prior to the divergence of Archaea and Bacteria, that this function has been maintained in extant prokaryotes, and that the domain was recruited to serve as an RNA binding module during the evolution of plant genomes. YhbY has a fold similar to that of the C-terminal domain of translation initiation factor 3 (IF3C), which binds to 16S rRNA in the 30S ribosome.	3.03337e-34
NZ_CP012159.1\|WP_169796651.1\|6880386_6881751_-\|hypothetical-protein	gnl\|CDD\|377474	pfam05157, T2SSE_N, Type II secretion system (T2SS), protein E, N-terminal domain. This domain is found at the N-terminus of members of the Type II secretion system protein E. Proteins in this subfamily are typically involved in Type 4 pilus biogenesis, though some are involved in other processes; for instance aggregation in Myxococcus xanthus. The structure of this domain is now known.	2.06363e-09
NZ_CP012159.1\|WP_082362777.1\|6890998_6891787_-\|arginyltransferase	gnl\|CDD\|234939	PRK01305, PRK01305, arginyl-tRNA-protein transferase; Provisional.	1.69355e-90
NZ_CP012159.1\|WP_156338859.1\|6896953_6897391_+\|hypothetical-protein	gnl\|CDD\|224511	COG1595, RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription].	2.46991e-08
NZ_CP012159.1\|WP_156338858.1\|6869006_6869435_-\|hypothetical-protein	gnl\|CDD\|237864	PRK14950, PRK14950, DNA polymerase III subunits gamma and tau; Provisional.	0.000729036
NZ_CP012159.1\|WP_179955478.1\|6872630_6873161_+\|hypothetical-protein	gnl\|CDD\|240291	PTZ00146, PTZ00146, fibrillarin; Provisional.	0.000644344
NZ_CP012159.1\|WP_050432793.1\|6870135_6872496_+\|DEAD/DEAH-box-helicase	gnl\|CDD\|274800	TIGR03817, DECH_helic, helicase/secretion neighborhood putative DEAH-box helicase. A conserved gene neighborhood widely spread in the Actinobacteria contains this uncharacterized DEAH-box family helicase encoded convergently towards an operon of genes for protein homologous to type II secretion and pilus formation proteins. The context suggests that this helicase may play a role in conjugal transfer of DNA.	0
NZ_CP012159.1\|WP_050436112.1\|6881810_6882065_-\|septum-formation-initiator-family-protein	gnl\|CDD\|368217	pfam04977, DivIC, Septum formation initiator. DivIC from B. subtilis is necessary for both vegetative and sporulation septum formation. These proteins are mainly composed of an amino terminal coiled-coil.	9.62349e-14
NZ_CP012159.1\|WP_050432802.1\|6892501_6896287_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|235832	PRK06567, PRK06567, putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Validated.	1.81652e-178

>NZ_CP012159.1|WP_050432799.1|6878644_6879514_+|class-I-SAM-dependent-methyltransferase
MRVPRHFLAALLTTAITTIAACTPTGRPEPPLVDAAPPATTTTAEPTVSTPATAPARVEQVTITPAVRAAVDAADRSATDRALDPGRHPAETLSFLGITPSAKVAELGAGGGYTAELLARIVGPSGTVYGQNSAFILERFAEAPWSERLTKPLMKPVVRVDRPFDDPLPPEAKELDAVLMLFFYHDTFWMGVDRDAMNRAVFRALKPGGVYGILDHSGRPGTGTSEVKTLHRIEEQVVREEIERAGFKLAAEATFLRNPDDPRDWNASPSAAGEKRGQSDRFVLKFVKP
>NZ_CP012159.1|WP_063796346.1|6877865_6878636_+|Uma2-family-endonuclease
MSGAAAKQIEDDPTVYPIEDDVGEGSLQRFISELLRGLIAQWLASRGQVAFVGADQFFYWEQYNPSEGIAPDVYVLLGVSPSTRVSAWKVWETQQRPSFAFEVVSHDVQKDHLGAPAKYGRLGVEELIVFDPDHRDSSSRVRWQVFRRSPRGFLRVEATSADRVHSEALGCWLRVVGEEGNTRVRLAIGPDGDELLPTDAEARTVAEAKQHRLEDALEAERRARVALEIELARLRFERDPTPPPASTDREVPRKTW
>NZ_CP012159.1|WP_050432798.1|6876715_6877843_+|hypothetical-protein
MSRIAAIWKAWVRLLDRREPGDTIALFRIAVAVVILSSLGEAIAYDLVDAVWVDRQWGGYRSLGNGPYLIALLGGPRPDVVWSVLIATVVLAVLLGVGLGGRVTSFLCLQGYIALHRLNHNSSGSSDILVTNALWLLTLARSTATLSLDCRIRTGKFRSDEAISAFPRYLAIAQLVTVYTTTGLQKVSVYWFPAGYYSALYYILQQPAWQRFDMAWAAKFYPVTQLATAVTWLWEVTAPLLLLVFYYRYTADRGGRMRRWMNRFDLRKPWVLTGIMLHLGILIAMDVGHFSTITMCFYLCLWQPEELREGARWVRAKLGLRDAVRATSTTREEKQMESTAPDEAHAETATRDDEQNGTDRPEPGQQVEGTAIPSR
>NZ_CP012159.1|WP_050432797.1|6876008_6876719_+|hypothetical-protein
MSLTGALRARIPERWIQRWPTIRAVLVTYHVIAVFVLAFPTPGGVMQRSSWENPTTQNEFRLWTERLRNFGMEITQKELETELWDFAERYLDVRRTTDAPFRPYAEYLGVRQSWRLFVAPQRYPVRVEVSIREGGTWRLIYQSRSSEHTWRATQLNRYRLRRAMFQTAWERERAAFKTFCDWIADQAAADFPEATEVMVRQLRYRTPAPAEARAGETILEPTYLSREVRKLKEHRK
>NZ_CP012159.1|WP_050432796.1|6874843_6875998_+|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme
MSEPDDRLETRLIHAGEPQPRFGGAVAMPVFQSSTFAIDGDAGYHDLRYIRLNNTPNHLALAEKLAAIEGADAALVTSSGMAAVSTTLLSLLGAGGHLLAQRELYGGTHGFITRDLPRLGITHTFIDAGDPSTWAAALQPSTRVLYVEAISNPLVRIGDLAAAATFARQHGLVSIIDATFATPVNLRPLTLGFDLVLHSATKYLNGHTDIVAGAVVGRAALIETIKHLLDHLGGSLDPHACFLLHRGLKTLALRVRHQSASALALARWLERHPAVAAVHYPGLETHPDHTRARAWFSGFGGVLSFELRGGVEAADRLIARTRLMTHAPSLGGPETLLTRPATASHAGLTPDERQRTGVTEGLLRLCVGLEATEDLIADLERGLE
>NZ_CP012159.1|WP_050432795.1|6873482_6874775_+|hypothetical-protein
MLGWRVTITFAAALPLALLANGCSDDGETSTGGNGTTTTGTTSTDPPGNAPTYYKDVAPILMDNCASCHRAEGIAPFSFLTYEDAKIAAYSIRNTTEQRLMPPFVLDNTGDCNTYSDARWLTDEQIKTIGDWVEAEMPEGDPADGPEIPPPPVGLDRVDVTFDMGVEYTPDASLTDDYRCFIIDPQLANDAYMIASEVIPGDQRVVHHAILYALDDESAEQAAADKDNQDNRPGYPCFGGAGVNARWLVGWAPGGRATTYPEGTGIKLEAGRKAVLQVHYNLSNGPMPDRTRVDLKLAPSVDKEAAVTPLPALNLNLPPGQERAEASFQFTLPAQTPEITIYGVGPHMHTLGKTMDVSAVRGDDETCLARVTNWNFHWQSNSFYTTPIRVRGGDTLKITCGFDTTRRTEPTTWGEGTEDEMCIAFLYMTR
>NZ_CP012159.1|WP_179955478.1|6872630_6873161_+|hypothetical-protein
MKLWFGLAVLTLGFAAACDDGGDGGSGGNGGNGGSSTPPTGCNADPWSCPAGQTCWPDQTGSFQCLNSGPGALGASCQLYKGQPTCGDGLVCLMLVGQAEGICTTYCDPADPARACSDDAICGQIQLQESGEQFRACVPQGGGGGAGGTGGAGAGGAGGDGGDGGMGGDGGGDGSM
>NZ_CP012159.1|WP_050432793.1|6870135_6872496_+|DEAD/DEAH-box-helicase
MPAPPWKVETGVDAVIHRWLASGAVRPCFTADRELPPVEPHHAPFPDDLSPALRGALEARGIQQLYAHQAQAIAAARAGRHVVVATPTASGKSLCFHLPVLEAITRDPGASAIYLYPTKALSRDQEAGVHALIREAGLSIPAVVYDGDTPGDARRAARERSPIVMTNPDMLHAGILPHHAHWARTFQKLKYVILDELHTYRGVFGSNVAHVLARLQRIAAFHGSTPAFLCATATIGNPREHAARMLGVPEGDLEIVTESGAPRGERRFFLFNPPVVNEELGIRASTPKSAVRLAADLARARVPTIIFGQSRNSVEIMLKYLREEVGKEVGEDAIMAYRGGYLPETRRRVERGLRDGEILCVVATSALELGIDIGDLDAVICAGYPGSIAETWQRFGRAGRRGERSVAVLCASSAPVDQYLARNPELLLDSHAESARIDPGNTEILIQHLKCAAFELPFLMGERYAVLAPEDTTAALRFLVDHGVVHESGDRFHWATDAYPANHVSLRAIGWDNFVIIDKAHGRTIAELDWRSTPTMLHEQAIYQHDGEQYQVERLDYENHKAYVTRVVPDYFTQAMTNRKVAVLDESASASLGRAQAAWGEVSIVEKIVGYKKIKFYTHENAGYGDVRLPDIQKHTTSFWLTVPEALCEALGMGRPAAIEGLRGIARALETVSTIALMCDPRDIGQTLGDAEGAGQNGDRPPTGGHGPQPGYDPTLFLFDNAPGGIGLAERIYERREELLARARKLLTGCGCAAGCPLCVGAVEQTAGAVRKNATLGLIALILHQA
>NZ_CP012159.1|WP_169796650.1|6869590_6869956_-|DUF4398-domain-containing-protein
MRGILAAGVVLVAGLAGCMSSTARLASQQMTETKSAIGLAEEAGAAQSERAALHLRMAREQLYQARKLLEEGDDKQATAVLRHAKQDAQRSLQIARAQREQEQWDLKQAPQSKPVMGQQGR
>NZ_CP012159.1|WP_156338858.1|6869006_6869435_-|hypothetical-protein
MGERAAVAVASSTDPNPGGTGPGQTTPEVQPVPHEPEVQPTKPKPEIEEPAVPPGSPEKPEVEEPPGAPKPEVERPPHPKPEVIPPAKPEKLPGRTPEVIPPAKPDVGLPGRTPEIQEPPGRIEVPAPGQQDVELPGMIPPR
>NZ_CP012159.1|WP_169796651.1|6880386_6881751_-|hypothetical-protein
MSIDLGRLLIEAGVLPAAEVEAALFLSVVRGIPFARALVDRGAITEQALEAELDRRAGLALRQVIGSRELFARLPKAMCRRLGAVPTRVDTTTGAADVATSDPLDRHVGAEFGFHLGMPVRLVRAPMAAIEEAIRTLELDERQAPSTRLRPRRVTPPSPHGSPQSTIPPPPSEELPIPLVRRAPHVYPGQAPAAGVTSPRAQGQERSETRLVAPSTLRGPGRTEADDGELGPAISFPSTPPGAAAEDAPVHEPSGDRAPVTLPQGRLHVPRLEPLSDGALQARFSAHDDTILPPASSGPFADLDQILAAIDGARSRDEIVALALEGLRHVAARAALFAVKRGMFQGYTCTPTFGDEVAFREVAIAMSSPSLLATANATGTYLGPIPGNPVHAPLLAVMGSASPDVAAVAVRVAGRPVLVLVADELSHSMTGTRSMDELARAVGDALTRILAARL
>NZ_CP012159.1|WP_050436112.1|6881810_6882065_-|septum-formation-initiator-family-protein
MLVVAVVGAPVMIFAPQGLPRLRSLERELSQVEEENAELSRDIEALRGRVARLRDDPAAVERIARDNLGLIRQNEVVFQFSKSR
>NZ_CP012159.1|WP_050432801.1|6882354_6887652_+|serine/threonine-protein-kinase
MSIDIVRGELERLFSLEEMMSLSTELLGIDPGEIGGSASKASFARALTDRCVELDAVDALLDAVTASRGSVDARVRELGARGISLPEELAEGATFGDFTIVKKIGEGPRGIVYAAKRGDSERVLKVISRDASQGPRASRRFVTHVRLAARVQHENLPSGLEAGFVDARPWVAYEPVEGQPLGARIAKTGPLHFNEARAFLRGILGGLAALHEARLSHGAVRIENVILAPGKDGQPRPVLVDVGGDRLRGGWQSRRIARSSSPEQLRGQVADLAGDIYAFGVLLFEVLAGKSPFQGSSAVEIGIAHLTQAAPSLGVTAPKGWVPKELDELVHRLLLKTAENRPKNARAVLETLEELGRPTAEGPKKTITDEQFDDRVALLLADPGDADVAMAVEAAVEQGAEPAKVAEAFVMAADQFEESEDVNAEKIREGKKSLLFRAARIYESGKEHAKSEEMYAAILALDPEDDIAFTALEELRKTLGKHEELVEMLLERSEKATENSERARALNEIGHLYVRELEDKDQGVFAFAQALSQAPENDEYAVDLERAAGSDMKIWAEALQILSQATTSEEMSSDGKLALFNRLGPWYAEKIARPDMGLPCFQFVLSLDPANDRALEGVAQLYRRAQQWQELGQVLLSRADRAPTPAAARDMRAEAAELLETRLNEPQKARDLYDQIFTEDPGHTRAADALLGLYRRAEDHLGTARILEQRAEALRGEERVEVMCKLAELYEDQLNDMAEATRRYEAALEVDARALTALRGLDRIYNRTGRYKELLVNLERQVAVAATPRQRINLYERMAGIYDEEFLDHQMASEALEIILKIDPAHEGSLTALTRHYRALNRWEDVVELHDRQLALATDDKRREELLLASGRVLLDQIGSPERARKAYEKVLELNPNHAGALESLAHVRAATGDAAAALTAVESLAEKAQAPDAKAEQWIRAAKMLEERGDRDGAIERYKRALDAQPDNQGAQTALRAAYLSRGDATSAVELISRIIDVTEGNLAKARLYGEMAEILKDKLSDDTRAAEAATKAVDLDPTSVLGLLISGDIAFEANRHLEAAKSYESLAARVDVMPQAQGLRMLLRYVDSLSKSGSTSKAIGTVKTLLTLAPDNPAAIGRAAKVNLDAGKAKEAAALYTDLIKRFSDDLSTSDRADALIHLGQARLDSGDADGAIEPLTEAADLVPESPLPLRLLGKVYEAKGNWEEVVRQRTRHLDMVVGEERSAMLLEIGDIVATQLNDRTRAAKSYVAALDERPDDRKILTKLMQLYSEEKDWGKLVEVVLKLASKVDDRKQKAKYLHTAAIVSSRQMGDLDRAVAFYDEVLDLDPSLVKALEEAIELRGEKGDHEGVERLLNVQLERATEAGDKDKMLATFDKLGYLYKDRLDLTTEAIDAFEAAQTLDPDNEVRNDLLAAIYASDPAQFLDKAVAAQLPILRRSPYKPDSYKLLRKLYTEAKRADSSFCVCQALVSLNAAEPDEERFFRRLRPESVAAAQDRLNEDDWARLVMHTEADPLLTSVFSVIEPAVLRKNGQALEVLGYQLAYAVDLVRHPYPMSQTIYYACGVLGMDPPVTFQNPNDGGGVNFLHAHTPAIVLGAAALAMDLPTQAAAFIAARHLTYYRPGLYLRHLVPTGTGLRAWLFAAIKLISPTFPISKDLEGPVRDNLAVLEPTIVGPARDQLASAVSKLLQAGAIDLKRWVSGVDLTADRAGFLLSNDLELAQEMIKASDEASAALPHKDRLKELLLYSVSEEYFALRRRIGINIDS
>NZ_CP012159.1|WP_082362775.1|6887920_6890020_+|histone-H1-like-repetitive-region-containing-protein
MAAKKTRKATRKATKKGTRGRAASSSRRSATAARAGKAKPAARTAARKTKRKTAAKRTTAAKSRPAAKRKAVKRPARKATTGRRKVAGTKKTPRARAITRRVAAKKTTRKPAKKALKRAVARKAAPKRAAGRKTTARKPAARKATGRKTTARKPAARKAAGRKTTARKPAARKAAGRKSTARKPAARKTTARKATARKTITRKAPARKTTARKPAARKAAGRKTTARKPAARGRTAARKTIATRSRKTTVRKALPARTRAKAAQGRTAARKGTRTRVAQTRAVKAKKPARQVARRVVRRRAPVVKAVEPRKVLRAPAEKLEQLEKPEKKKKLRSEEGGERVRKVSEAPAAPKSGERVALGSERPEKSSERPVRLKERSAKGSDQGRNGEAGERNSDRPAKNGARSARNSDRPGTRAGRSSSPPARTPVREVPRVVSLPLPMLPPQRRASIEERSLVIEKRLAAQTDEFRNRYYESFDMSWIYHDSALEGVVYTYEELTTALRNETPPADSSLQPTYDDIRRHKEAIAYVRDYGAQKRLPITLDCLRKIYLILHPEEGDIKTVKYRKDIPQHRLYFHEYTPPDKIAYKVRQIADWLNDPETRKTRNGIRIAARAHYDLLRVYPFPVDSGKASRLFMNIILLRAGLPPAIIHSTERQRYYEALKGSATTVLQMVQEAVENALASVEKLLDEHESRKRAFVS
>NZ_CP012159.1|WP_082362777.1|6890998_6891787_-|arginyltransferase
MSSEREGLRGEQDIDVLSRVRIDALESPPELVVHDELGACPYLADPVARMPLRLPIRRLTPAEFERRLEVGNRRQGRLLYRTQCPSCAACEPIRILVDEFVPGRTQRRVLRRGAETFSIDVGPPTLSQDRVDLYNRHKRGRNLLRGDDDLDAAGYQAFLVDTCCQTFEIRYRMGDRLVGVSVVDQGERSLSAVYTYFDPAHEPLSPGVFSILTQIELCKRWGLPHLYLGLYIADCPRMVYKSGYLPHERLIAGRWTRFDRET
>NZ_CP012159.1|WP_050436115.1|6892157_6892484_+|ribosome-assembly-RNA-binding-protein-YhbY
MSLTGKQRRHLRALGHHLNPLVQLGKGGLTESVTSAVGEALEQHELIKIRIGTECPDDREDVAENLAGALKAEVAQTMGRTILLYRRHPKEPKITLPGAEKVKAKKSA
>NZ_CP012159.1|WP_050432802.1|6892501_6896287_-|FAD-dependent-oxidoreductase
MEATSGFQSDFSSWVQSTSEPEALVLGVAGFSYPDLFEPTRLAELSERFDAAFGQEDPEAYARFDAYRTAVRGGAVVPPEQTSEALLSAAPHLSRFVAHLFGVDRALGALIDAAAERSALWQFKKEFSKKRLFKASAGRAWQGTAVEAAHAARRVLAALGAPPSLLEGGAAAEELAVARAALSLLEVDEVARKAAKAGGAHWTDALHARAAHVRAALAADPALERVSASSVATEAARPTDAEDAAVTAFALDAIEAWLARRRADEHDPARYWPTLRTPHNLDYQQLVQLRRKDDALPELFVGPEHERRERDGFALTDRRATPREIESEVDYCLFCHDRDKDSCSKGLRDNKTGAIKANPLGVPLHGCPLGEKISEMHLMRQGGDAIASLALVCIDNPMLPGTGHRICNDCMKACVYQKQEPVNIPQIETAVLTDVLGLPWGLEIYGLLTRWNPLDVERPQAKPYNGKSVMVVGLGPAGYTLAHHLAREGFAVAAIDGLKIEPLPVELTGDDTRPPRPVRDFAKLYVELDERVLLGFGGVSEYGITVRWDKNFLTVLYITLARQRCLRIYGGVRFGGTIDVADAWKLGFDHVAIAAGAGRPTLIQLKNNLARGIRKASDFLMALQLSGAYKRSSLANLQVRLPAVVIGGGLTAIDTCTELLAYYLVQVEKTAARVDALVAARGEDAVMALFDEEEREFILEQRRHAAALRDERARAEREGRPPRLQALLDAWGGVSLVYRKRLIDSPAYRLNHEEVAKSLEEGVRYVENMSPVEAVLDAHGAVSAMVFERQALLDGKWRNTGEHVTLPARTVCVAAGTSPNVTFEKEHPGHFTFDRWKQFFQAHRAWVDDAGALHVEPSEAERGFFTSYNDGKHAVSFYGDNHPHYAGSVVKAMASAKDAFPSVVALFRHDLARLDQEPQATRDARRRALFARLDHEFIAVVERVERLTPTIIEVVVRAPAAARKFEPGQFYRLQNYEVRSPRIGDARLTMEGLALTGAWVDKEQGLLSMIALEMGVSSRLIAALRPGEEVVVMGPTGTPTEIPERETLLLAGGGLGNAVLFSIAKALRARGDRVIYFAGYRMGEDLFKQEEIEIATDQVVWCTDAGAAISPRRPVDRHFRGNIVQAMVAYAEGRLGGEVARLSEVNRIIAIGSDRMMNAVREARHGALAPHLNPRHHAIASINSPMQCMMKEICAQCLQKHVDPETGAETVVFTCYNQDQPLDRVDFRHLASRLRLNSAQEKLANAWFEQVLATTPGLLRV
>NZ_CP012159.1|WP_156338859.1|6896953_6897391_+|hypothetical-protein
MPQREVEDVTADCLAAAWAAIQRGDFRVHAWVDPVEALRRWLYGIAWRLSAHERDRARHRREVLVDAPWDFAREEPALDAEAQLRARVILRALDALPETQRALLLATAEGATPSELSAPLRVTPRAVLHQLSRARRALLVAARVE
>NZ_CP012159.1|WP_050432804.1|6897410_6898757_-|acetyl-CoA-carboxylase-biotin-carboxylase-subunit
MFKKILIANRGEIAMRIIRASRILGIRTVAIHSEADAGALHVRFADEAVCIGPTDAAKSYLNIPQIIAAAEVTGADAIHPGYGFLSESAHFADVCRKCRLTFIGPTPEAMRTWGDKVAARAAARRFGLPLLPGTGVLKDAVEAAREAAQIGYPVILKAAGGGGGRGMRVVREEDELARAFDTATREASASFKNPNIYLERFIEEPRHIEFQVLADQHGQVWTLGERECSLQRRHQKVIEEAPSPSMTNDRRITMSDIVRGAMKETGYTTLGTLEFLMDEGGELYFMEMNTRLQVEHPVTELVTGVDLVEQQIRAAAGERLRLPDTRPWSFRGHAIECRINAEDPRTFTPWPGHITEYHAPGGGGVRVDSGVYGGWRVPSAYDALLAKVITHGPNRAEAIAKMRCALDEFIIGGIRTNIPLHQALLRDPEVIEGRMSTRTIERVVARGF
>NZ_CP012159.1|WP_050436116.1|6898770_6899235_-|acetyl-CoA-carboxylase-biotin-carboxyl-carrier-protein
MDFNQLRALLRLLEKRDVSEFEFEDEHARIRLVRGARRVVAEPLAGGYAPALPPAAPTASAPVAAPAAPAADDAKTAFVTSPFVGTFYRSPSPDAPPFVEVGSSIREGQALCIIEAMKLMNEIEADQAGVIVEILVENGKSVEFGQRLFKVRPT

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Crispr_ID: NZ_CP012159_29

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012159_29

7095638-7099260

Unclear

I-A,I-B,II-B

Consensus_repeat	Method
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	CRISPRCasFinder
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	CRT
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	PILER-CR

50 spacers

cas2,cas1,cas7,cas8b3,cas3,cas6

The CRISPR arrays of NZ_CP012159_29

>merge|NZ_CP012159|29|7095638-7099260|CRISPRCasFinder,CRT,PILER-CR
ATGCTCGGCGTCTTACGGCATCACAGCGAGCATCACTCCGGTAGCCCCACGATCGCCCCAGGCGCCCCGGGGTGCTCAACGCCTTACGGCATCACAGCGAGCATCACGGCCATGTTCGCGCGCCAGATCACATGCTGACCGAGATGTGCTCAAAGCCTTACGGCATCACAGCGAGCATCACCTGGACTTGCAGAACCGCCGCCGTCGGTCAGGAACGTGCTCAACGCCTTACGGCATCACAGCGAGCATCACCGGGCTGGGCGGCACGCACCGCACCTGCGCTCGCACGTGCTCAACGCCTTACGGCATCACAGCGAGCATCACTGTTGACAGCCGACGTGGCCAACACTGTCAGCGTCACGTGCTCAACGCCTTACGGCATCACAGCGAGCGTCACGTCGTAAGTGGCCTCGGGACCCGGGAATCCGTTACTGTGCTCAACGCCTTACGGCATCACAGCGAGCGTCACAAGACGGACGCGCCGTTGACAACCATATGCGACATCTGTGCTCAACGCCTTACGGCATCACAGCGAGCGTCACGACTTCGCCTGCGCAGGAGCCACGCTCCGTCGCTGGAGTGCTCAACGCCTTACGGCATCACAGCGAGCGTCACCGGAGAGCCTTCGCCAGCACGGATGGTACCGCAAGTGCTCAACGCCTTACGGCATCACAGCGAGCGTCACTCCCTCTCGCGGCGGCCCTTATCCTGAACGCATTCGCCGTGCTCAACGCCTTACGGCATCACAGCGAGCGTCACAGCACCACCCCTCGCCCCGTGCGGCTCGCCTCCGAGTGCTCAACGCCTTACGGCATCACAGCGAGCGTCACGAGAATGCGCAGAGTGCCTGGCGCAGGATCGACAAGTGCTCAACGCCTTACGGCATCACAGCGAGCGTCACGGCGATGTGGCTGGGGTTGGGTGGGTGATCTTGGTGTGCTCAACGCCTTACGGCATCACAGCGAGCGTCACTCCATCCCGGAGGAAGCGTGGCGCGCAGCAGGGGGGTGCTCAACGCCTTACGGCATCACAGCGAGCGTCACCACTGATGCCAGGCGGCAACTGCACGAGCGGGCCGGGTGCTCAACGCCTTACGGCATCACAGCGAGCGTCACGCTTCCCGCCCGTGCTGGGGTTCACCATTACCGTCTTGTGCTCAACGCCTTACGGCATCACAGCGAGCGTCACCTGTCATCTGTAGTTCTGAGACCGCCATTGTTGGGTGCTCAACGCCTTACGGCATCACAGCGAGCGTCACCCGCAGAGGACAACCGGGTAGCGAAGCTGTTCCTGTGCTCAACGCCTTACGGCATCACAGCGAGCGTCACACTCAGTCACCGACTAACTCAACGAGTACGGAGAAGTGCTCAACGCCTTACGGCATCACAGCGAGCGTCACTGGACGGAGGTGCCCGATGAACTTCGGAGAAGATGTGCTCAACGCCTTACGGCATCACAGCGAGCGTCACCCCGGAGGCCGGCCAGTCGCTCCACACCACCGTCACGTGCTCAACGCCTTACGGCATCACAGCGAGCGTCACGTAGCTCTGGCGGAACACGTCCCGGTCTCTGAGCGCGTGCTCAACGCCTTACGGCATCACAGCGAGCGTCACTCTCCCGCGTAGTCAAGGACGTGCCCTACTCCCCGTGCTCAACGCCTTACGGCATCACAGCGAGCGTCACTGCCGACGAAGCTCTTGAAAGGGCGCAAATTCACGTGCTCAACGCCTTACGGCATCACAGCGAGCGTCACGTCGTGATAGCGGGTGCAGGGCGCGCTGGTTTGAGCGGTGCTCAACGCCCTACGGCATCACAGCGAGCGTCACGGAGGTCTTTTGGAGGTACAGATACGCTGGCGCGTGTGCTCAACGCCTTACGGCATCACAGCGAGCGTCACCAGACGCGCTCCTCGCTGGCGTCGCCGCACTCCCGTGCTCAACGCCTTACGGCATCACAGCGAGCGTCACAGGTCCCTTGCCCCCGCTTTTCCAGTCGAAATGGCAGTGCTCAATGCCTTACGGCATCACAGCGAGCGTCACCGCTGAGAAGTGCCGTCTCGCCGACTCGCAGAAGAGGGTGTGCTCAACGCCTTACGGCATCACAGCGAGCGTCACAGACCAGCCCCGCACTGACCTTTGGCCGCGTAGTTGTGCTCAACGCCTTACGGCATCACAGCGAGCGTCACTCGTCCGCAGGGTGGGTGTCACAGCGGGCTCGGCGAAGTGCTCAACGCCTTACGGCATCACAGCGAGCGTCACGGATTCGGGGCGCGCCGAGCGGCGGCACCACGGGACGGTGCTCAACGCCTTACGGCATCACAGCGAGCGTCACAGTGACGTTGCCCTGGTGTCTCGCCTGCTGGATCGGGTGCTCAACGCCTTACGGCATCACAGCGAGCGTCACAAGGAAGGGCATTGGAACCCCAGCCCACAGTCTAGGTGCTCAACGCCTTACGGCATCACAGCGAGCGTCACCGGCGAATGTTGCGACCGATTGCTTCGCGCGCCTTTTGGTGCTCAACGCCTTACGGCATCACAGCGAGCGTCACATTCGGCGAAAGCGGCGCCGAAGCTCAGTGGCATGTGCTCAACGCCTTACGGCATCACAGCGAGCGTCACTCTCCCGGGATCGCGTGGCCTCGCGCATAACATCGTGCTCAACGCCTTACGGCATCACAGCGAGCGTCACTGAACTGATAAGAGACGGCGCTTGCGCGACCCTTGGCGTGCTCAACGCCTTACGGCATCACAGCGAGCGTCACGCGCGCGGCGCCGAGCTGCTCGCCGTTGCTGTCTGTTGTGCTCAACGCCTTACGGCATCACAGCGAGCGTCACATGCAGCGGCCGGCTTGGCCGGTGAAGTCGCTGGAACGTGCTCAACGCCTTACGGCATCACAGCGAGCGTCACTTCAGATCGACCGTGAATTTCCAATCAAGGATCTGTGCTCAACGCCTTACGGCATCACAGCGAGCGTCACCCCCTATCCGCACGAGCATGAGCAACAGCTCCACAATGTGCTCAACGCCTTACGGCATCACAGCGAGCGTCACGCACGAGGTCGATCGCCGGGATCTTCTGGGGCTTCGAGTGCTCAACGCCTTACGGCATCACAGCGAGCGTCACGTGGACCCTGGACCTAGCCGAGGGTGGCGTCGTGTTGTGCTCAACGCCTTACGGCATCACAGCGAGCGTCACGGAGGGCGGCGACTGTCCGGCGTGCGGCAACGATAAGTGCTCAACGCCTTACGGCATCACAGCGAGCGTCACCCAGAACTGGGAGCGCGCCGCCGGGGACCCAGTGGTGCTCAACGCCTTACGGCATCACAGCGAGCGTCACCCACCACGGCGCGTGCCTTATCCGTCTGCGCGTCGTGCTCAACGCCTTACGGCATCACAGCGAGCGTCACTCACCCCTTGCGACACCAACGCCACCCAACACGGGTGCTCAACGCCTTACGGCATCACAGCGAGCGTCACTCGATACGAGCCCCGCCCCCTTCGGGCAGCTCAATCCAGTGCTCAACGCCTTACGGCATCACAGCGAGCGTCACCCCGACGTCGGAGCAGGTTGGCGAGGTCCACCAAGTGTGCTCAACGCCTTACGGCATCACAGCGAGCATCAC

>NZ_CP012159|29|25|7095638-7099260|CRISPRCasFinder
ATGCTCGGCGTCTTACGGCATCACAGCGAGCATCAC	TCCGGTAGCCCCACGATCGCCCCAGGCGCCCCGGG
GTGCTCAACGCCTTACGGCATCACAGCGAGCATCAC	GGCCATGTTCGCGCGCCAGATCACATGCTGACCGAGAT
GTGCTCAAAGCCTTACGGCATCACAGCGAGCATCAC	CTGGACTTGCAGAACCGCCGCCGTCGGTCAGGAAC
GTGCTCAACGCCTTACGGCATCACAGCGAGCATCAC	CGGGCTGGGCGGCACGCACCGCACCTGCGCTCGCAC
GTGCTCAACGCCTTACGGCATCACAGCGAGCATCAC	TGTTGACAGCCGACGTGGCCAACACTGTCAGCGTCAC
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	GTCGTAAGTGGCCTCGGGACCCGGGAATCCGTTACT
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	AAGACGGACGCGCCGTTGACAACCATATGCGACATCT
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	GACTTCGCCTGCGCAGGAGCCACGCTCCGTCGCTGGA
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	CGGAGAGCCTTCGCCAGCACGGATGGTACCGCAA
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	TCCCTCTCGCGGCGGCCCTTATCCTGAACGCATTCGCC
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	AGCACCACCCCTCGCCCCGTGCGGCTCGCCTCCGA
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	GAGAATGCGCAGAGTGCCTGGCGCAGGATCGACAA
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	GGCGATGTGGCTGGGGTTGGGTGGGTGATCTTGGT
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	TCCATCCCGGAGGAAGCGTGGCGCGCAGCAGGGGG
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	CACTGATGCCAGGCGGCAACTGCACGAGCGGGCCGG
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	GCTTCCCGCCCGTGCTGGGGTTCACCATTACCGTCTT
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	CTGTCATCTGTAGTTCTGAGACCGCCATTGTTGG
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	CCGCAGAGGACAACCGGGTAGCGAAGCTGTTCCT
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	ACTCAGTCACCGACTAACTCAACGAGTACGGAGAA
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	TGGACGGAGGTGCCCGATGAACTTCGGAGAAGAT
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	CCCGGAGGCCGGCCAGTCGCTCCACACCACCGTCAC
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	GTAGCTCTGGCGGAACACGTCCCGGTCTCTGAGCGC
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	TCTCCCGCGTAGTCAAGGACGTGCCCTACTCCCC
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	TGCCGACGAAGCTCTTGAAAGGGCGCAAATTCAC
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	GTCGTGATAGCGGGTGCAGGGCGCGCTGGTTTGAGCG
GTGCTCAACGCCCTACGGCATCACAGCGAGCGTCAC	GGAGGTCTTTTGGAGGTACAGATACGCTGGCGCGT
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	CAGACGCGCTCCTCGCTGGCGTCGCCGCACTCCC
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	AGGTCCCTTGCCCCCGCTTTTCCAGTCGAAATGGCA
GTGCTCAATGCCTTACGGCATCACAGCGAGCGTCAC	CGCTGAGAAGTGCCGTCTCGCCGACTCGCAGAAGAGGGT
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	AGACCAGCCCCGCACTGACCTTTGGCCGCGTAGTT
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	TCGTCCGCAGGGTGGGTGTCACAGCGGGCTCGGCGAA
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	GGATTCGGGGCGCGCCGAGCGGCGGCACCACGGGACG
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	AGTGACGTTGCCCTGGTGTCTCGCCTGCTGGATCGG
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	AAGGAAGGGCATTGGAACCCCAGCCCACAGTCTAG
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	CGGCGAATGTTGCGACCGATTGCTTCGCGCGCCTTTTG
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	ATTCGGCGAAAGCGGCGCCGAAGCTCAGTGGCAT
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	TCTCCCGGGATCGCGTGGCCTCGCGCATAACATC
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	TGAACTGATAAGAGACGGCGCTTGCGCGACCCTTGGC
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	GCGCGCGGCGCCGAGCTGCTCGCCGTTGCTGTCTGTT
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	ATGCAGCGGCCGGCTTGGCCGGTGAAGTCGCTGGAAC
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	TTCAGATCGACCGTGAATTTCCAATCAAGGATCT
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	CCCCTATCCGCACGAGCATGAGCAACAGCTCCACAAT
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	GCACGAGGTCGATCGCCGGGATCTTCTGGGGCTTCGA
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	GTGGACCCTGGACCTAGCCGAGGGTGGCGTCGTGTT
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	GGAGGGCGGCGACTGTCCGGCGTGCGGCAACGATAA
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	CCAGAACTGGGAGCGCGCCGCCGGGGACCCAGTG
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	CCACCACGGCGCGTGCCTTATCCGTCTGCGCGTC
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	TCACCCCTTGCGACACCAACGCCACCCAACACGG
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	TCGATACGAGCCCCGCCCCCTTCGGGCAGCTCAATCCA
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	CCCGACGTCGGAGCAGGTTGGCGAGGTCCACCAAGT
GTGCTCAACGCCTTACGGCATCACAGCGAGCATCAC

>NZ_CP012159|29|6|7095638-7099260|CRT
ATGCTCGGCGTCTTACGGCATCACAGCGAGCATCAC	TCCGGTAGCCCCACGATCGCCCCAGGCGCCCCGGG
GTGCTCAACGCCTTACGGCATCACAGCGAGCATCAC	GGCCATGTTCGCGCGCCAGATCACATGCTGACCGAGAT
GTGCTCAAAGCCTTACGGCATCACAGCGAGCATCAC	CTGGACTTGCAGAACCGCCGCCGTCGGTCAGGAAC
GTGCTCAACGCCTTACGGCATCACAGCGAGCATCAC	CGGGCTGGGCGGCACGCACCGCACCTGCGCTCGCAC
GTGCTCAACGCCTTACGGCATCACAGCGAGCATCAC	TGTTGACAGCCGACGTGGCCAACACTGTCAGCGTCAC
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	GTCGTAAGTGGCCTCGGGACCCGGGAATCCGTTACT
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	AAGACGGACGCGCCGTTGACAACCATATGCGACATCT
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	GACTTCGCCTGCGCAGGAGCCACGCTCCGTCGCTGGA
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	CGGAGAGCCTTCGCCAGCACGGATGGTACCGCAA
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	TCCCTCTCGCGGCGGCCCTTATCCTGAACGCATTCGCC
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	AGCACCACCCCTCGCCCCGTGCGGCTCGCCTCCGA
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	GAGAATGCGCAGAGTGCCTGGCGCAGGATCGACAA
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	GGCGATGTGGCTGGGGTTGGGTGGGTGATCTTGGT
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	TCCATCCCGGAGGAAGCGTGGCGCGCAGCAGGGGG
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	CACTGATGCCAGGCGGCAACTGCACGAGCGGGCCGG
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	GCTTCCCGCCCGTGCTGGGGTTCACCATTACCGTCTT
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	CTGTCATCTGTAGTTCTGAGACCGCCATTGTTGG
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	CCGCAGAGGACAACCGGGTAGCGAAGCTGTTCCT
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	ACTCAGTCACCGACTAACTCAACGAGTACGGAGAA
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	TGGACGGAGGTGCCCGATGAACTTCGGAGAAGAT
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	CCCGGAGGCCGGCCAGTCGCTCCACACCACCGTCAC
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	GTAGCTCTGGCGGAACACGTCCCGGTCTCTGAGCGC
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	TCTCCCGCGTAGTCAAGGACGTGCCCTACTCCCC
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	TGCCGACGAAGCTCTTGAAAGGGCGCAAATTCAC
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	GTCGTGATAGCGGGTGCAGGGCGCGCTGGTTTGAGCG
GTGCTCAACGCCCTACGGCATCACAGCGAGCGTCAC	GGAGGTCTTTTGGAGGTACAGATACGCTGGCGCGT
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	CAGACGCGCTCCTCGCTGGCGTCGCCGCACTCCC
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	AGGTCCCTTGCCCCCGCTTTTCCAGTCGAAATGGCA
GTGCTCAATGCCTTACGGCATCACAGCGAGCGTCAC	CGCTGAGAAGTGCCGTCTCGCCGACTCGCAGAAGAGGGT
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	AGACCAGCCCCGCACTGACCTTTGGCCGCGTAGTT
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	TCGTCCGCAGGGTGGGTGTCACAGCGGGCTCGGCGAA
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	GGATTCGGGGCGCGCCGAGCGGCGGCACCACGGGACG
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	AGTGACGTTGCCCTGGTGTCTCGCCTGCTGGATCGG
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	AAGGAAGGGCATTGGAACCCCAGCCCACAGTCTAG
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	CGGCGAATGTTGCGACCGATTGCTTCGCGCGCCTTTTG
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	ATTCGGCGAAAGCGGCGCCGAAGCTCAGTGGCAT
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	TCTCCCGGGATCGCGTGGCCTCGCGCATAACATC
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	TGAACTGATAAGAGACGGCGCTTGCGCGACCCTTGGC
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	GCGCGCGGCGCCGAGCTGCTCGCCGTTGCTGTCTGTT
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	ATGCAGCGGCCGGCTTGGCCGGTGAAGTCGCTGGAAC
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	TTCAGATCGACCGTGAATTTCCAATCAAGGATCT
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	CCCCTATCCGCACGAGCATGAGCAACAGCTCCACAAT
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	GCACGAGGTCGATCGCCGGGATCTTCTGGGGCTTCGA
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	GTGGACCCTGGACCTAGCCGAGGGTGGCGTCGTGTT
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	GGAGGGCGGCGACTGTCCGGCGTGCGGCAACGATAA
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	CCAGAACTGGGAGCGCGCCGCCGGGGACCCAGTG
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	CCACCACGGCGCGTGCCTTATCCGTCTGCGCGTC
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	TCACCCCTTGCGACACCAACGCCACCCAACACGG
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	TCGATACGAGCCCCGCCCCCTTCGGGCAGCTCAATCCA
GTGCTCAACGCCTTACGGCATCACAGCGAGCGTCAC	CCCGACGTCGGAGCAGGTTGGCGAGGTCCACCAAGT
GTGCTCAACGCCTTACGGCATCACAGCGAGCATCAC

>NZ_CP012159|29|4|7095639-7099260|PILER-CR
TGCTCGGCGTCTTACGGCATCACAGCGAGCATCACT	CCGGTAGCCCCACGATCGCCCCAGGCGCCCCGGGG
TGCTCAACGCCTTACGGCATCACAGCGAGCATCACG	GCCATGTTCGCGCGCCAGATCACATGCTGACCGAGATG
TGCTCAAAGCCTTACGGCATCACAGCGAGCATCACC	TGGACTTGCAGAACCGCCGCCGTCGGTCAGGAACG
TGCTCAACGCCTTACGGCATCACAGCGAGCATCACC	GGGCTGGGCGGCACGCACCGCACCTGCGCTCGCACG
TGCTCAACGCCTTACGGCATCACAGCGAGCATCACT	GTTGACAGCCGACGTGGCCAACACTGTCAGCGTCACG
TGCTCAACGCCTTACGGCATCACAGCGAGCGTCACG	TCGTAAGTGGCCTCGGGACCCGGGAATCCGTTACTG
TGCTCAACGCCTTACGGCATCACAGCGAGCGTCACA	AGACGGACGCGCCGTTGACAACCATATGCGACATCTG
TGCTCAACGCCTTACGGCATCACAGCGAGCGTCACG	ACTTCGCCTGCGCAGGAGCCACGCTCCGTCGCTGGAG
TGCTCAACGCCTTACGGCATCACAGCGAGCGTCACC	GGAGAGCCTTCGCCAGCACGGATGGTACCGCAAG
TGCTCAACGCCTTACGGCATCACAGCGAGCGTCACT	CCCTCTCGCGGCGGCCCTTATCCTGAACGCATTCGCCG
TGCTCAACGCCTTACGGCATCACAGCGAGCGTCACA	GCACCACCCCTCGCCCCGTGCGGCTCGCCTCCGAG
TGCTCAACGCCTTACGGCATCACAGCGAGCGTCACG	AGAATGCGCAGAGTGCCTGGCGCAGGATCGACAAG
TGCTCAACGCCTTACGGCATCACAGCGAGCGTCACG	GCGATGTGGCTGGGGTTGGGTGGGTGATCTTGGTG
TGCTCAACGCCTTACGGCATCACAGCGAGCGTCACT	CCATCCCGGAGGAAGCGTGGCGCGCAGCAGGGGGG
TGCTCAACGCCTTACGGCATCACAGCGAGCGTCACC	ACTGATGCCAGGCGGCAACTGCACGAGCGGGCCGGG
TGCTCAACGCCTTACGGCATCACAGCGAGCGTCACG	CTTCCCGCCCGTGCTGGGGTTCACCATTACCGTCTTG
TGCTCAACGCCTTACGGCATCACAGCGAGCGTCACC	TGTCATCTGTAGTTCTGAGACCGCCATTGTTGGG
TGCTCAACGCCTTACGGCATCACAGCGAGCGTCACC	CGCAGAGGACAACCGGGTAGCGAAGCTGTTCCTG
TGCTCAACGCCTTACGGCATCACAGCGAGCGTCACA	CTCAGTCACCGACTAACTCAACGAGTACGGAGAAG
TGCTCAACGCCTTACGGCATCACAGCGAGCGTCACT	GGACGGAGGTGCCCGATGAACTTCGGAGAAGATG
TGCTCAACGCCTTACGGCATCACAGCGAGCGTCACC	CCGGAGGCCGGCCAGTCGCTCCACACCACCGTCACG
TGCTCAACGCCTTACGGCATCACAGCGAGCGTCACG	TAGCTCTGGCGGAACACGTCCCGGTCTCTGAGCGCG
TGCTCAACGCCTTACGGCATCACAGCGAGCGTCACT	CTCCCGCGTAGTCAAGGACGTGCCCTACTCCCCG
TGCTCAACGCCTTACGGCATCACAGCGAGCGTCACT	GCCGACGAAGCTCTTGAAAGGGCGCAAATTCACG
TGCTCAACGCCTTACGGCATCACAGCGAGCGTCACG	TCGTGATAGCGGGTGCAGGGCGCGCTGGTTTGAGCGG
TGCTCAACGCCCTACGGCATCACAGCGAGCGTCACG	GAGGTCTTTTGGAGGTACAGATACGCTGGCGCGTG
TGCTCAACGCCTTACGGCATCACAGCGAGCGTCACC	AGACGCGCTCCTCGCTGGCGTCGCCGCACTCCCG
TGCTCAACGCCTTACGGCATCACAGCGAGCGTCACA	GGTCCCTTGCCCCCGCTTTTCCAGTCGAAATGGCAG
TGCTCAATGCCTTACGGCATCACAGCGAGCGTCACC	GCTGAGAAGTGCCGTCTCGCCGACTCGCAGAAGAGGGTG
TGCTCAACGCCTTACGGCATCACAGCGAGCGTCACA	GACCAGCCCCGCACTGACCTTTGGCCGCGTAGTTG
TGCTCAACGCCTTACGGCATCACAGCGAGCGTCACT	CGTCCGCAGGGTGGGTGTCACAGCGGGCTCGGCGAAG
TGCTCAACGCCTTACGGCATCACAGCGAGCGTCACG	GATTCGGGGCGCGCCGAGCGGCGGCACCACGGGACGG
TGCTCAACGCCTTACGGCATCACAGCGAGCGTCACA	GTGACGTTGCCCTGGTGTCTCGCCTGCTGGATCGGG
TGCTCAACGCCTTACGGCATCACAGCGAGCGTCACA	AGGAAGGGCATTGGAACCCCAGCCCACAGTCTAGG
TGCTCAACGCCTTACGGCATCACAGCGAGCGTCACC	GGCGAATGTTGCGACCGATTGCTTCGCGCGCCTTTTGG
TGCTCAACGCCTTACGGCATCACAGCGAGCGTCACA	TTCGGCGAAAGCGGCGCCGAAGCTCAGTGGCATG
TGCTCAACGCCTTACGGCATCACAGCGAGCGTCACT	CTCCCGGGATCGCGTGGCCTCGCGCATAACATCG
TGCTCAACGCCTTACGGCATCACAGCGAGCGTCACT	GAACTGATAAGAGACGGCGCTTGCGCGACCCTTGGCG
TGCTCAACGCCTTACGGCATCACAGCGAGCGTCACG	CGCGCGGCGCCGAGCTGCTCGCCGTTGCTGTCTGTTG
TGCTCAACGCCTTACGGCATCACAGCGAGCGTCACA	TGCAGCGGCCGGCTTGGCCGGTGAAGTCGCTGGAACG
TGCTCAACGCCTTACGGCATCACAGCGAGCGTCACT	TCAGATCGACCGTGAATTTCCAATCAAGGATCTG
TGCTCAACGCCTTACGGCATCACAGCGAGCGTCACC	CCCTATCCGCACGAGCATGAGCAACAGCTCCACAATG
TGCTCAACGCCTTACGGCATCACAGCGAGCGTCACG	CACGAGGTCGATCGCCGGGATCTTCTGGGGCTTCGAG
TGCTCAACGCCTTACGGCATCACAGCGAGCGTCACG	TGGACCCTGGACCTAGCCGAGGGTGGCGTCGTGTTG
TGCTCAACGCCTTACGGCATCACAGCGAGCGTCACG	GAGGGCGGCGACTGTCCGGCGTGCGGCAACGATAAG
TGCTCAACGCCTTACGGCATCACAGCGAGCGTCACC	CAGAACTGGGAGCGCGCCGCCGGGGACCCAGTGG
TGCTCAACGCCTTACGGCATCACAGCGAGCGTCACC	CACCACGGCGCGTGCCTTATCCGTCTGCGCGTCG
TGCTCAACGCCTTACGGCATCACAGCGAGCGTCACT	CACCCCTTGCGACACCAACGCCACCCAACACGGG
TGCTCAACGCCTTACGGCATCACAGCGAGCGTCACT	CGATACGAGCCCCGCCCCCTTCGGGCAGCTCAATCCAG
TGCTCAACGCCTTACGGCATCACAGCGAGCGTCACC	CCGACGTCGGAGCAGGTTGGCGAGGTCCACCAAGTG
TGCTCAACGCCTTACGGCATCACAGCGAGCATCAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012159.1\|WP_050432938.1\|7117728_7118325_-\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|99749
NZ_CP012159.1\|WP_050432930.1\|7099887_7101561_-\|type-I-MYXAN-CRISPR-associated-endonuclease-Cas4/Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|274899
NZ_CP012159.1\|WP_050432937.1\|7117004_7117610_-\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|99749
NZ_CP012159.1\|WP_050432924.1\|7089691_7090696_+\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381302
NZ_CP012159.1\|WP_050432922.1\|7087745_7088657_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176114
NZ_CP012159.1\|WP_050432929.1\|7099504_7099801_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP012159.1\|WP_156338873.1\|7091879_7092896_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050432931.1\|7102006_7102711_-\|CRISPR-associated-protein-Cas5	unknown	unknown	gnl\|CDD\|274218
NZ_CP012159.1\|WP_050432919.1\|7084180_7084885_+\|type-B-chloramphenicol-O-acetyltransferase	unknown	unknown	gnl\|CDD\|100040
NZ_CP012159.1\|WP_050432933.1\|7103661_7105410_-\|type-I-MYXAN-CRISPR-associated-protein-Cmx8	cas8b3	mkCas0177_cas8b3_CAS-I-B	gnl\|CDD\|275206
NZ_CP012159.1\|WP_050432932.1\|7102711_7103635_-\|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	cas7	cd09687_cas7_CAS-I-B	gnl\|CDD\|187818
NZ_CP012159.1\|WP_050432923.1\|7088780_7089695_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187572
NZ_CP012159.1\|WP_050432936.1\|7115955_7116765_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|273261
NZ_CP012159.1\|WP_050432935.1\|7107844_7108690_-\|type-I-MYXAN-CRISPR-associated-protein-Cas6/Cmx6	cas6	cd09703_cas6_CAS-I:CAS-III	gnl\|CDD\|370559
NZ_CP012159.1\|WP_050432921.1\|7086554_7087697_+\|AI-2E-family-transporter	unknown	unknown	gnl\|CDD\|223701
NZ_CP012159.1\|WP_156339345.1\|7105508_7107827_-\|CRISPR-associated-helicase-Cas3'	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|273707
NZ_CP012159.1\|WP_050432920.1\|7085036_7085630_+\|glutamine-amidotransferase	unknown	unknown	gnl\|CDD\|153234
NZ_CP012159.1\|WP_050432928.1\|7093676_7095398_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_156339344.1\|7085687_7086185_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237537
NZ_CP012159.1\|WP_050432925.1\|7090821_7091883_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP012159.1\|WP_050432938.1\|7117728_7118325_-\|Uma2-family-endonuclease	gnl\|CDD\|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	1.70603e-30
NZ_CP012159.1\|WP_050432930.1\|7099887_7101561_-\|type-I-MYXAN-CRISPR-associated-endonuclease-Cas4/Cas1	gnl\|CDD\|274899	TIGR03983, hypothetical_protein_LA3181, CRISPR-associated endonuclease Cas1, subtype MYXAN. Members of this protein are the Cas1 endonuclease, or Cas1 domain in Cas4/Cas1 fusion proteins, of the MYXAN subtype of CRISPR/Cas systems. These systems typically feature repeats and spacers each about 36 base pairs in length. Species with this type of CRISPR system include Myxococcus xanthus, Cyanothece sp., Leptospira interrogans, Sorangium cellulosum, Anabaena variabilis ATCC 29413, etc.	0
NZ_CP012159.1\|WP_050432937.1\|7117004_7117610_-\|Uma2-family-endonuclease	gnl\|CDD\|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	3.2785e-32
NZ_CP012159.1\|WP_050432924.1\|7089691_7090696_+\|aldo/keto-reductase	gnl\|CDD\|381302	cd19076, AKR_AKR13A_13D, AKR13A and AKR13D families of aldo-keto reductase (AKR). Schizosaccharomyces pombe aldo-keto reductase YakC is a founding member of aldo-keto reductase family 13 member A1 (AKR13A1). It catalyzes the reversible reduction of ketones to the respective alcohols using NADP(+) as a hydride donor. Rauvolfia serpentina PR is a founding member of aldo-keto reductase family 13 member D1 (AKR13D1). It catalyzes the NADPH-dependent reduction of the aldehyde perakine to yield the alcohol raucaffrinoline in the biosynthetic pathway of ajmaline in Rauvolfia, a key step in indole alkaloid biosynthesis. This family also includes Arabidopsis thaliana aldo-keto reductases, ALKR1-6.	1.29071e-124
NZ_CP012159.1\|WP_050432922.1\|7087745_7088657_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176114	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain. This CD includes the substrate binding domain of LysR-type transcriptional regulator (LTTR) CrgA and its related homologs. The LTTRs are acting as both auto-repressors and activators of target promoters, controlling operons involved in a wide variety of cellular processes such as amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to name a few. In contrast to the tetrameric form of other LTTRs, CrgA from Neisseria meningitides assembles into an octameric ring, which can bind up to four 63-bp DNA oligonucleotides. Phylogenetic cluster analysis further showed that the CrgA-like regulators form a subclass of the LTTRs that function as octamers. The CrgA is an auto-repressor of its own gene and activates the expression of the mdaB gene which coding for an NADPH-quinone reductase and that its action is increased by MBL (alpha-methylene-gamma-butyrolactone), an inducer of NADPH-quinone oxidoreductase. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	8.14968e-70
NZ_CP012159.1\|WP_050432929.1\|7099504_7099801_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	1.2964e-16
NZ_CP012159.1\|WP_050432931.1\|7102006_7102711_-\|CRISPR-associated-protein-Cas5	gnl\|CDD\|274218	TIGR02593, CRISPR-associated_protein_Cas5, CRISPR-associated protein Cas5, N-terminal domain. This model represents a shared N-terminal domain, about 43 amino acids in length, common to a number of related protein families each of which is associated with a distinct subtype of CRISPR/cas system, where CRISPR is an acronym for Clustered Regularly Interspaced Short Palindromic Repeat and Cas is an abbreviation for CRISPR-associated. Members of this family are widely distributed enough that we designated the family Cas5. Homology appears remote, or absent, between the more C-terminal regions different subfamilies of these proteins, which typically are 210 to 265 amino acids in total length. Cas5 proteins of six different CRISPR/cas subtypes so far defined are described by respective full-length models TIGR01868, TIGR01876, TIGR01895, TIGR01874, TIGR02586, and TIGR02592. The best characterized protein in this family is DevS or Myxococcus xanthus, a Cas protein that appears to participate in a species-specific developmental pathway.	2.27768e-05
NZ_CP012159.1\|WP_050432919.1\|7084180_7084885_+\|type-B-chloramphenicol-O-acetyltransferase	gnl\|CDD\|100040	cd03349, LbH_XAT, Xenobiotic acyltransferase (XAT): The XAT class of hexapeptide acyltransferases is composed of a large number of microbial enzymes that catalyze the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and streptogramin, among others. Members of this class of enzymes include Enterococcus faecium streptogramin A acetyltransferase and Pseudomonas aeruginosa chloramphenicol acetyltransferase. They contain repeated copies of a six-residue hexapeptide repeat sequence motif (X-[STAV]-X-[LIV]-[GAED]-X) and adopt a left-handed parallel beta helix (LbH) structure. The active enzyme is a trimer with CoA and substrate binding sites at the interface of two separate LbH subunits. XATs are implicated in inactivating xenobiotics leading to xenobiotic resistance in patients.	1.31521e-70
NZ_CP012159.1\|WP_050432933.1\|7103661_7105410_-\|type-I-MYXAN-CRISPR-associated-protein-Cmx8	gnl\|CDD\|275206	TIGR04413, hypothetical_protein_LEP1GSC082_4029, CRISPR type MYXAN-associated protein Cmx8. Members of this family occur only in CRISPR/cas loci of the MYXAN type, but are present in a minority of such systems. This protein appears to replace the MYXAN system Cas8a1/Csx13 protein (TIGR03485/TIGR03486), compared to which it shows similar length and composition but only about 12 percent sequence identity.	0
NZ_CP012159.1\|WP_050432932.1\|7102711_7103635_-\|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	gnl\|CDD\|187818	cd09687, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas7 is a RAMP superfamily protein; Subunit of the Cascade complex; also known as Cst2/DevR family.	3.1316e-20
NZ_CP012159.1\|WP_050432923.1\|7088780_7089695_+\|SDR-family-oxidoreductase	gnl\|CDD\|187572	cd05262, SDR_a7, atypical (a) SDRs, subgroup 7. This subgroup contains atypical SDRs of unknown function. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	1.30678e-123
NZ_CP012159.1\|WP_050432935.1\|7107844_7108690_-\|type-I-MYXAN-CRISPR-associated-protein-Cas6/Cmx6	gnl\|CDD\|370559	pfam09559, Cas6, Cas6 Crispr. The Cas6 Crispr family of proteins averaging 140 residues are characterized by having a GhGxxxxxGhG motif, where h indicates a hydrophobic residue, at the C-terminus. The CRISPR-Cas system is possibly a mechanism of defense against invading pathogens and plasmids that functions analogously to the RNA interference (RNAi) systems in eukaryotes.	3.90333e-77
NZ_CP012159.1\|WP_050432921.1\|7086554_7087697_+\|AI-2E-family-transporter	gnl\|CDD\|223701	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only].	7.63179e-43
NZ_CP012159.1\|WP_156339345.1\|7105508_7107827_-\|CRISPR-associated-helicase-Cas3'	gnl\|CDD\|273707	TIGR01587, CRISPR-associated_endonuclease/helicase_Cas3, CRISPR-associated helicase Cas3. This model represents the highly conserved core region of an alignment of Cas3, a protein found in association with CRISPR repeat elements in a broad range of bacteria and archaea. Cas3 appears to be a helicase, with regions found by pfam00270 (DEAD/DEAH box helicase) and pfam00271 (Helicase conserved C-terminal domain). Some but not all members have an N-terminal HD domain region (pfam01966) that is not included within this model.	8.87207e-48
NZ_CP012159.1\|WP_050432920.1\|7085036_7085630_+\|glutamine-amidotransferase	gnl\|CDD\|153234	cd03140, GATase1_PfpI_3, Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus. Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus. PfpI is an ATP-independent intracellular proteases which may hydrolyze small peptides to provide a nutritional source. Only Cys of the catalytic triad typical of GATase1 domains is conserved in this group. This Cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow.	4.0237e-70
NZ_CP012159.1\|WP_156339344.1\|7085687_7086185_-\|hypothetical-protein	gnl\|CDD\|237537	PRK13875, PRK13875, conjugal transfer protein TrbL; Provisional.	2.92856e-05
NZ_CP012159.1\|WP_050432936.1\|7115955_7116765_-\|hypothetical-protein	gnl\|CDD\|273261	TIGR00768, Tetrahydromethanopterin:alpha-L-glutamate_ligase, alpha-L-glutamate ligase, RimK family. This family, related to bacterial glutathione synthetases, contains at least three different alpha-L-glutamate ligases. One is RimK, as in E. coli, which adds additional Glu residues to the native Glu-Glu C-terminus of ribosomal protein S6, but not to Lys-Glu mutants. Most species with a member of this subfamily lack an S6 homolog ending in Glu-Glu, however. Members in Methanococcus jannaschii act instead as a tetrahydromethanopterin:alpha-l-glutamate ligase (MJ0620) and a gamma-F420-2:alpha-l-glutamate ligase (MJ1001).	4.39738e-10

>NZ_CP012159.1|WP_050432928.1|7093676_7095398_+|hypothetical-protein
MRRHARDWVRWHRGPQRTDSQNLASALTVLTVEELRTFITDALPRLDDGIRAQLEDLLLLRAARGGSGWKPPPPSAAIVENIRAFTAMARRQGSAEPAEVDDCLRQALTASLAGEHATARAVFDTLLHPITHGDIFLGQDELVDEVLSVDLEACVHHHIAAVYQTTPLPERASAILQALDASDGLAYLTDPLDAILQVLGKPPPDLDAFLPLWIDHLEREDSPSAMRSPRRERWFRAAVARQEGIPGLARIAHATKRPGDADAWCNALVAEGAWSRALAAYETSITLVESDVARGRYLDGAALAAQVLERKDLRKKLEAAWQQAPTLPRLLRWLMAGDPSTAVLRRRATAALAAPPSDAPPLLGLLHVLTGDLPSAAAHLTACPGLGWSRLDHPGHLLFASFAWLLGGAPTGSLREELTLVLRQPPGDAFELLPGVDLLPGVDLLPEVEEPARARKPVLHTPTVIDVLQRAEAISRLPLGAPKLILDALKAAAVQRTEGVLGEKRRRTYDHAARLIACCVELSDGPWGAGETTRWAEGLRLRAARFPAFQEALQAALGRARRAGMAAEVGSGA
>NZ_CP012159.1|WP_156338873.1|7091879_7092896_-|hypothetical-protein
MKSLHLLVAMGCVLATLVTCGRADEQRDVCEGTCCTGACDPCADGACEDTDALGWGPPVLLWWGDAATPAPGCPAWAPEVVYEGIDGLSAEQRCPSCACGPAACKLPAGLVVWDEFMCNAHDVPDPTFTTFPAPDPWDGSCVTHPTIPAGSFRSIRFLSTTLSPCTPVTGPEPMVAEPVWATHARACGEGNTPAEESVPREERVTPEGFRECLWRRGEPGPCPTHYPERRVFHEDIESSLGCTECACGEPMEGSCVAVVRLFHRPECDMTPGHSGGTAMGLHNAPCKGWLDGPSPITVGSISAKWNEQDPGRCEPSGGLPRGEVWTNEQTTFCCEGMR
>NZ_CP012159.1|WP_050432925.1|7090821_7091883_-|hypothetical-protein
MNSQDDPEPTLRQRTRARTLAWGTLGGLAVLFTLLPASCRLGRIMIYTCPDPCETCDDPCHPCIEALGECVPEAPFGWAGPVLVWAGPRAIEPPPCPDHAPSRVYQGYDGLSVERGCPRCSCGPITCLSPETIATSDRAVCLGDEPRDDDLHLPIPPLWSGSCLEVPAVDEADVASLSASETRVGACEPNVGPIPASDAFAWDFHAMACANEAAPRLCEDEANWCAPQLTGDFHQCVYTRGDEPTCPVGYPKRRVFFEGIDGSLACTACACDAPAVSECRVNVEAFRDPACNDSIGDVDPDLATRACTDLVLPGGLRSLSMTWTVDEPGACAPRGGSPTGRVTPDGPTTFCCL
>NZ_CP012159.1|WP_050432924.1|7089691_7090696_+|aldo/keto-reductase
MTTTPTTRLGKTGPSVFPIALGCMGMGAGSWYGDSDDDESIATLHEALDRGVNLLDTGDFYSMGKNEMLVGKALRGRRDDALLSVKFGALRGPDGTHLGHDARPAAVKNFLAHSLSRLGVEYIDIYRPARLDPSVPIEDTIGAIADLVKAGYVRYIGLSEVGPETIRRAAKVHPICDVQLEYALVSRSVESILPTLREFGIAMTAYGVLSRGMLTGKTPKGQGDVRAHFPRFAAENVEKNQSLVQALARTAREKGVTPAQLAIAWVRAKAAEHHVTIVPTLGARNRQQLADVLSSLDVSLDASEVAALEAAVPASQVAGTRYAAPGMAMLDSEK
>NZ_CP012159.1|WP_050432923.1|7088780_7089695_+|SDR-family-oxidoreductase
MRVFITGATGFVGAAVVRELIDAGHHVLGLARSDASAAALDRAGAEVHRGSIHDLDSLRSGASACDGVIHTAFDHDFSKYREHCEADRRVIEALGAALSGSDHPLIVTSAVGVLPLGQRATEATPPVQGAQAHPRAATEEAAAAVAARGVRVSVVRLPPSVHGEGDHGFVPILIDIARRTGASACVDDGQNRWPAVHRRDAARLYRLVLEAPDVVPTAHAIAEEGIPFRDIATAIGRHTHLPVVSTSAAEAARHFGWFAGFAALDIPTSSARTQERLGWRPEQIGLLADLEQGHYFTTRPEPTP
>NZ_CP012159.1|WP_050432922.1|7087745_7088657_-|LysR-family-transcriptional-regulator
MARDPDRHALDGLGILRAVVEAGSFVGAGEALGLTQPAVSRAVARIEERVGVRLFRRTARSIALTDEGRRFYEAIAPHLRAIEEATIEAGSARAEVRGRLRVNVDPGTGQFVLTPRLGQFLAQHPALFVELVVRDRMGDLVREGFDVAVRFGLPEPSALKARLLLRTRVLTCASPGYLAQHGTPRRPRDVEQHACILMRDPSTGSHFGWEFVRGKKVVAVDVKGQLLVNQVGTMLAACLAGQGITQLLELGVREFFADGRLVQVLPAWADETYPLYAYHHAAQPMAAMVRAFLDFVSALAREA
>NZ_CP012159.1|WP_050432921.1|7086554_7087697_+|AI-2E-family-transporter
MRTRPSVLLRHPIAVAFAIILLFGLLRVTVDIAHFLLLGFFSILLATVLLYPIDLLSRRMPRGVAVLITAVSIVGAIVGTIVFVTPRLLAQARQLGEQLPQAANRLHDLWLRLLHSAPLAQVPEAQKLATTLPERVGEGVHWLAAHLVPAAVNLVSALSTLVLLFVLALFLAHQPATYHKGLRALVPRDHEPVVDEAWRRFGRALRGWMGGILVSMTLMGTLTALGLLAVGVESWLILGVLTFFGTFVPYAGALITAIPGLAVGLAESPERFAYVALVYLGVHIVEGYLVEPMVMKRAVSIEPAVLLFWQITMSAVFGVMGIVVATPLLVCVQVAIGYFYIERVLHKESGEATPSDGPRKHARPAPSTPPPAASTPPPAP
>NZ_CP012159.1|WP_156339344.1|7085687_7086185_-|hypothetical-protein
MEGAEGAAGTAGAAGAAGAAGAAGAAGEGSPAGGGVGAPSAAAGAGGIGRAASMGPSVEMPSDAILLTIFLRHDQTKTLDQINAHLDRSGFRHSFPPEGTEVVSWYVMMGIGQVVTLRVPPDKLRAVNLAIERGAWGAFRTEFYPTYDYAPLWKAQRATDAAKKR
>NZ_CP012159.1|WP_050432920.1|7085036_7085630_+|glutamine-amidotransferase
MSQQTVYLFVFDTLADWEAGFAIAHINQPEHQKNPGRYQIRTVGLTRDPVRSLGGVTIVPDLGLADLRSEGTALLILPGGTVWDAEGIPAATDKARELLAAGVPVAAICGATAGLARAGLLDDRAHTSNARDYLEATDYKGAAHYRDTLAVTDRDVITASGLGALEFAREIFRLLDVYPEPMLDAWYGLFKGQPQPT
>NZ_CP012159.1|WP_050432919.1|7084180_7084885_+|type-B-chloramphenicol-O-acetyltransferase
MSRQRRTTPPDSKDFDVNSTNFFESPFRGKLLSEQVKNPNILVGRYSYYSGYYHGHSFDDCARYLFPDRNDVDKLIIGSFCSIGSGVAFIMAGNQGHRSDWVSTFPFFYMSEVPSFAGSIDGFKGAGDTVVGHDVWIGSEAMIMAGVRIGHGALIGSRALVTRDVEPYTVVGGNPAKPIRKRFSDEHIALLLEMAWWDWSDDQLHGAMKLLCAGDIPALHAHWRAHVASAPKAP
>NZ_CP012159.1|WP_050432929.1|7099504_7099801_-|CRISPR-associated-endonuclease-Cas2
MAEPRHWHLVMYDVSEPSTLRKVHKTLSAWGKPMQYSAFRVRGTARELARLRFELSAMIDGKDRLMVIRLCSGCAARVSVQGEALAPLEADPPPFRMV
>NZ_CP012159.1|WP_050432930.1|7099887_7101561_-|type-I-MYXAN-CRISPR-associated-endonuclease-Cas4/Cas1
METETAAPTLRVMSLHALVYCERLFYLEEVEELRVADEAVWEGRRLHVELDEPADVVEMTLESQALGLRGRMDAVRRRSGALYPIEHKRGRCRRGPGEIPAAWPTDVVQAAAYAMLLEEHTGAEVEEARVRYHKDNVTVRVPITDGERALVASYVARARYLTTTTERPPVTDDERKCVRCSLAPVCLPEEARFAEATGPETSPEHPSAPTPVRLYPPDTERRSLHVVSHGARVGRSGDCFQVVDRDAGRTRVGVREVSDIVLHGHAQITTQALRLCAAEEIPVHFVTASGAHVGMFAMGPGGVQRRIRQYRGLTDDGFTLSLARRLILAKVEMQLRHLLRSSRKEAALRELIAGTIDLMRGCLRRAAHATTREELMGQEGNAARAYFQAIARLVSPDAGEAFLPNGRSRRPPEDRFNALLSFGYALLYRDVLSAIQRVGLEPAFGVLHQPRSAAFPLALDLTELFRVPVVDMAVLGAVNRRTFHAERDFTVTGRQVWLSDEGRRAMLEVYERRKHEEYRHDALGFSLSYARMMELEVRLLEKEWSGEGGLFARFRIR
>NZ_CP012159.1|WP_050432931.1|7102006_7102711_-|CRISPR-associated-protein-Cas5
MERLWLHVRAPFAAYRPLQAGVYRTSVPTIPYSAALGLLLNLAGIETRDPRPAVTTGMRDDVPRLRLAIGQLVTPGVSTLYQQLHSYPVGNSGKELEARTHGAKFWIVPVRREVLVGLDVVLGAEAEDPAILGRVRRGLRGELDEPRYGLPFAGDNSYLFDCLDVLNAPRPARWYTPILPEESLRRGSCRLPVSIHREDSSRTRTLLCAPTVEALGEPPEEAWIWTPSAPSSPA
>NZ_CP012159.1|WP_050432932.1|7102711_7103635_-|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR
MSRSDKEKKTSPKNLFATVLTYAAPSSNYRGESEENRTILQKITRGNQEHTVISPESMRNALREILSGWGLPTNRRRLHDQDQLAVEFKEFPDATKYADDFLFGFMVADDKAIKANKGKRAKRDSVLRMNLAVSLTPYSFDATFHQSPLNAGESPWRNSASSALIHREIVDTAYQYPFALAGQDVFQEEQGPVWSRALLKALGQLSNVAGGHARSYYEMAPRSVVARLSANLVAGFDTYGFDAQGGFPELSRVKADDLPGDEIWLGGEVVRKLEKTERERLAAEGVHLHENPQALLEQLGAAAFGGR
>NZ_CP012159.1|WP_050432933.1|7103661_7105410_-|type-I-MYXAN-CRISPR-associated-protein-Cmx8
MKGQGRTKASRAERGGEEAASKGKPRAGVRGQEGTDEVAPEGPIELTYSLAELPSAQHRAGLAGLVMLVAWLARQPAKERGICSITRLEAGRVSLRLDLTGVKRLLDAMYDASHEEVAVQTPWKRRGGELVEPLRVEEREVQDPKSGTSKKKKFHIYPVVVPRGAFLVDHEPPTANGTTLWIKLWRDMVWAILRGIPTQRLPFEARAEERATTEHLDAWADLTGPADKAIKLPGTYFIGAQERSAENVGFRDLARQQFLLHFLPIALQVYVPRVVSIVDGTSESGGGYVIVVPDVADLATFCDELPRVLKERETDVAGFRPRAAVILLPAEGALDMARRLKARIASQEGRRSTADLLVALEVYHLEKQGNSVRLLGAWRLDLEDEILDEYTHLRGMRLRSDSFKRQRLLNLLDRAPWYRGFDRIAETTSYKEVTIGSKSFRHDARLSFEVAQKNREATMQQRDGKAPERLDIEEIVYSVARTYVSQKLSTKYGLEWKGEWKDSKADDARKSEYNAKKEKIAKEAFLAVRSRSGAAFASYFVGSLCSVPQYLSKARYEVVAHALAKEPDRVRTLTLLALSAAG
>NZ_CP012159.1|WP_156339345.1|7105508_7107827_-|CRISPR-associated-helicase-Cas3'
MELLAKSPRGPRRLSLERHLVETEAAAVRLFDLSRRWGQAFCRFFRISEAHRERFLLNLRLAALFHDLGKANQDFMVAVTTRGAPAQALRHEHLSALILHLPEVRTWIARGPLVDVEVLTAAVLSHHLQAARSGDHTWGAPRGGREAVRLHLDHPQVKAILHHIAEVAGVGEPPTLGQRSWGLGDETWIAALREGKRAATALDRALRIDSERRSLLLAVKAGVIVADSVASGLHREDHPLEAWIDDVAHAPALTAEDVHTHILAPREKHLAKPGERFTYHRFQDRAAEQGPRALLLAACGAGKTLAAWRWAQEQAKSRPIGRVVFLYPTRGTATEGFRDYVSWAPEDMATLLHGSARYELEMMQENPSEGAKDKQFEHAEDRLFALGVWPRRYFSATVDQFLGFMEHSYQSLCLLPVLADAAVVIDEVHSFDRHMFDVLVSFLRHFDVPVLCMTATLPPSRRNELVQAGLRVYPSEEARVELADLEARERHPRYRIEAVAGAGEDVACAEAIAAYRRGDRVLWVVNQVGRCQRLARALEEALGEPVHCYHSRFTLKDRRERHNKTVAAFQQKERRALAVTTQVCEMSLDLDADVLITELSPVTALVQRFGRAHRRLDRSPEFRARLLWYPPERPEPYSRQDLTASTAFLASLGTENISQHQLAVALEEHALAERDADGSARFLQSGYYAVPGAFRDTDGGAATCILDRDLAQVKALHQKRDRLDPYLISIRRKFTLPDEQRPSWLPRHLGVAPSARYTEEFGFPTDEGAERS
>NZ_CP012159.1|WP_050432935.1|7107844_7108690_-|type-I-MYXAN-CRISPR-associated-protein-Cas6/Cmx6
MLDDPRDCPAAWQNPFPLRKTCFDDRGDAVRDPAVDQRRMRRAFSPSHASGSGKALGGAHGFRPHHSPEEVSVISDIPPRVDISFRLAAKLAPLDHGYALFSALCRLLGDLHGAEWLAVHPLPGTPRPDGLLAVDGRRGLRLRVDPAQIPRVLPLAGKWLDIGGHAARVGVSSVFPLASASTLRARLVTIKGFLEPEPFLEALQRQLDAMGVAGRPTAGRRRVLDVANDKVVGFGVELHGLTEDGALRVQALGLGGRRRMGCGVFVPATVDEASAGREHAS
>NZ_CP012159.1|WP_050432936.1|7115955_7116765_-|hypothetical-protein
METRFLFVTGEPAAALPLLKQRAGWGAVVSATSFAVTAGRLHRPRNTTDDFQGVLYFADVRDKDLERHTLRLLAEHAIPCWPAPELLLAASERHAALARCVAAGLVDHPVVQATHTPTPQLPFPYVLKVGEEHRGEGKFLIQSARDIPRWEGIASMEPFFQGTSVRVLLVGERAFGARIENAGSWIKNGPGASVEPWTPGEALVAHAREAMRVFGLAIAGVDYVVNAQGFHFIEVNPFPRVGLSKESLAAAQVRFGEAMEAVEREARGR
>NZ_CP012159.1|WP_050432937.1|7117004_7117610_-|Uma2-family-endonuclease
MGDPAEKRAPSATYADLVAAPAHLVAELVDGVLYTSPRPASPHAHAASVLGMDIGSPFQRGRGGPGGWHILYEPELHFGDDVLVPDLAGWRRERMPDLPQVAFFTLPPDWVCEVLSLSTASLDRTRKRPAYAAAGVTWLWLVDPLARMLEVFRLGPQKRWVVEQGFSGDAVVRASPFEAIELELSALWLPEAPERPEGEAP
>NZ_CP012159.1|WP_050432938.1|7117728_7118325_-|Uma2-family-endonuclease
MGHLAEKRPAPATYADLEAVPPHLVAEIVDGVLHTLPRPAPAHAHASSELVFELSGPFGHGRGGPGGWRILMEPELHLGADVLVPDLAGWRLDRMPRLPRAAHFTQPPDWICEVLSPSTSAYDRAEKLPAYAAAGVSWAWLLDPLLHSLEVFHIGPRERWVLEHVFRGEAAVHAAPFDAIALDLAALWPDLEDDDTNP

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Crispr_ID: NZ_CP012159_30

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012159_30

7109204-7114398

Unclear

I-A,I-B,II-B

Consensus_repeat	Method
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CRISPRCasFinder
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CRT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCACTG	PILER-CR
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	PILER-CR

72 spacers

cas6,cas3,cas8b3,cas7,cas1,cas2

The CRISPR arrays of NZ_CP012159_30

>merge|NZ_CP012159|30|7109204-7114398|CRISPRCasFinder,CRT,PILER-CR,PILER-CR
GTGCTCAGCGCCTCACGGCATCACTGCGATGCATCACCCGTGGACCACACCTGCCGCAGTTCTCGTTGTCAGAGTGCTCAACACCTTGCGGCATCACCGCGAGCATCACCCGCTTGCGACCGCACCTCCAGTCGCTCACCGTCAGTGCTCAACGCCTTACGGCATCACCGGGAGATCGCCTGGCTCAAGCTCCAGATCGCGGTGATGCTCAACGCCTTATTAATTCCAGCATCACCGCGAGCATCACGGGTCCGCGATGAGAGCGCCGTGGCTGTCCGAGCAGTGCTCAACGCCTTACGGCATCACCGCGAGCATCACTGACCAGCAGGATCGGCCTCGTGCAGCCGCTGCATGTGCTCAACGCCTTACGGCATCACTCCTTGACGGGCGCGGGCCCGATGCGGACCGACTGGGTGCTCAACGCCTTACGGCATCACTGCGAGCATCACTGGCGAGAAGCGCCTGCGCGAGAAGCGTCAGCGCTAGTGCTCAACGCCTTACGGCATCACCGCGAGCATCACCTTCTCGGTGGCTGCGGGCCTCGACCGCTTCGCCGCGTGCTCAACGCCTTACGGCATCACCGCGAGCATCACTCCGGATCCCAGCGCGGCCGTTCGTCGGCCCGGTGTGCTCAACGCCTTACGGCATCACCGCGAGCATCACCTCCATCGAGCATGCCCCCAACAGCAGCAAACAGTGCTCAACGCCTTACGGCATCACCGCGAGCATCACCGCCGCTGAAAAGGAGACCACCGACTCAATCCCACGCAGTGCTCAACGCCTTACGGCATCACCGCGAGCATCACGAGGAGGCAGACCGTGACGCTGCCTGAGCTTCCCGAGTGCTCAACGCCTTACGGCATCACCGCGAGCATCACCCCACGGAAGCCCACTTGGCGACCTGTCCCGGCGGGTGCTCAACGCCTTACGGCATCACCGCGAGCATCACCTTTGGCTCTTCCACCATTGCGCCATGTTAACGATGTGCTCAACGCCTTACGGCATCACCGCGAGCATCACTTCGCGACGCTCACGCCACCGTCGCGCGCCTGGACGTGCTCAACGCCTTACGGCATCACCGCGAGCATCACAGCGTCTCGAGGGTGGCGTAGGCGGCGGTGGCGTCGTGCTCAACGCCTTACGGCATCACCGCGAGCATCACAGGGAGGCTCTGGTCGGCCCGCTCCGGGCACTGGAGTGCTCAACGCCTTACGGCATCACCGCGAGCATCACGTCAAGCGGCATGGGCTCCTGGCCAGGGGAGAAGAAGTGCTCAACGCCTTACGGCATCACCGCGAGCATCACGGGAAGGGAACGCGGCCGGTGTCGTGGATCGTGATGTGCTCAACGCCTTACGGCATCACCGCGAGCATCACGTCAATGGTCATCTCGTCCGCAAGTAGAACGTAAATGTGCTCAACGCCTTACGGCATCACCGCGAGCATCACGCCAGGTCGCAGAGCACCTCGAACAGCTCGCCACCGTGCTCAACGCCTTACGGCATCACCGCGAGCATCACTGCCGGAGCCTGACACCCGTCCAGACGCTTCCAGAGCGTGCTCAACGCCTTACGGCATCACCGCGAGCATCACTTGGCGTCATCCCCGCCGGCAACCTTGAATACAGGGTGCTCAACGCCTTACGGCATCACCGCGAGCATCACCACCGCGTCGGGGCAATTGTGCCCAGCGATTACGTGTGCTCAACGCCTTACGGCATCACCGCGAGCATCACCACCGCGTCGGGGCAATTGTGCCCAGCGATTACGTGTGCTCAACGCCTTACGGCATCACCGCGAGCATCACGAGAGGGTCGCGGCAGCGATTGCAAAGTACAGCTTCGTGTGCTCAACGCCTTACGGCATCACCGCGAGCATCACATCGATGGTATCGGACGAATCCGACCACCTCGTGCAGAGTGCTCAACGCCTTACGGCATCACCGCGAGCATCACTATTGTCCTGCACTGCGCCAGACCACACCTTTTCCCCGTGCTCAACGCCTTACGGCATCACCGCGAGCATCACCCTGCACCGCCTCCGCCAGTTCACCAACGCTCTTGTGCTCAACGCCTTACGGCATCACCGCGAGCATCACGCTCCAGCGGGAAGGCCATGGGGTGCTTCGGGAGCCGTGCTCAACGCCTTACGGCATCACCGCGAGCATCACGCTCATGGACGAGTGGGACACCGACGTGTTCCTCCAGAGGTGCTCAACGCCTTACGGCATCACCGCGAGCATCACTTGCCAGTGACCGTGCTCTTGTCGAGCATCCCTGTGTGCTCAACGCCTTACGGCATCACCGCGAGCATCACGTCGCGACCGGCGATGATCCGCGGTCGTCTCCGAAGTGCTCAACGCCTTACGGCATCACCGCGAGCATCACCTCGACAGTGAGCCCCAGGGATCGGGACAACCACCGGTGCTCAACGCCTTACGGCATCACCGCGAGCATCACCGTTGCGACAACGGGGGATGGGTCCAGGCACCCGCACGGTGCTCAACGCCTTACGGCATCACCGCGAGCATCACCGCCCGTGAGCCCCTCCAGCTTCACAGCTAGTTCTTCCGTGCTCAACGCCTTACGGCATCACCGCGAGCATCACGGAGCATCACAATCCGCTCGGCGACGCGGCTTTCGTGTGCTCAACGCCTTACGGCATCACCGCGAGCATCACTCACGCGCTTCCTTGAGCGTGGTCGTGCACCCGATGAGGTGCTCAACGCCTTACGGCATCACCGCGAGCATCACCGACTCCTCCGCCTACAGCTCAACCAGTGAGCGCATGTGCTCAACGCCTTACGGCATCACCGCGAGCATCACTGCTCAACCTGCGACAGCTTGTAGATCACAAGTCTGTGTGCTCAACGCCTTACGGCATCACCGCGAGCATCACCCTTTGGGGGCCCGGCGATCGTGGTGCGCCGCTGGTAGTGCTCAACGCCTTACGGCATCACCGCGAGCATCACAAGGTCATGGCCTGGGGGATCAACACCGTCTTCGGGTGCTCAACGCCTTACGGCATCACCGCGAGCATCACGCCAGGAATGGGCTTCATTGCAGGAGCGGTTAGCTCGTGCTCAACGCCTTACGGCATCACCGCGAGCATCACTCCGCAGGGTGGGTGTCACAGCGGGCGCAGTGAAGTGCTCAACGCCTTACGGCATCACCGCGAGCATCACGTGGTCGGCCCCGTGACGGGGGCGATGGCTGCTGCGTGCTCAACGCCTTACGGCATCACCGCGAGCATCACACCCCCTTGAGGCGCACGTCGCTGATCGTCGCGTAACTGTGCTCAACGCCTTACGGCATCACCGCGAGCATCACACGAGCGTGTTGGTAGTTAAGACCCTGCTTAACCTGTGCTCAACGCCTTACGGCATCACCGCGAGCATCACCAGCCACTCGCGGCAGGTTTGCGTACGAAGTGAGATGGTGCTCAACGCCTTACGGCATCACCGCGAGCATCACATCAGGATCCCCACGCCGCCAGGATTCGCGGCCATAGTGTGCTCAACGCCTTACGGCATCACCGCGAGCATCACCGCTGGTGGCGTTTCGCATTTTGAGGTGATTATGGGGTGCTCAACGCCTTACGGCATCACCGCGAGCATCACAGGCGAAGGTGACGCCAGTGCCAGGGACGGCGTAGGAGTGCTCAACGCCTTACGGCATCACCGCGAGCATCACCCACGGGAAAGTCCCGCGCTCGGACAAGGCCTTCATGTGCTCAACGCCTTACGGCATCACCGCGAGCATCACGCGAGCGCTGCGTCCAATCCGTGCGGCGCCTGCCGTGCTCAACGCCTTACGGCATCACCGCGAGCATCACAGGGCGTGAGGGAAACTTCGGCATCATGCAACGCCCAGTGCTCAACGCCTTACGGCATCACCGCGAGCATCACTCAGGTCGCGCGCGACACCGGTCCGGTCAACATGTGTGCTCAACGCCTTACGGCATCACCGCGAGCATCACTATTCAAGGACTACAAGCTCGACATGCTCGTCATGTGCTCAACGCCTTACGGCATCACCGCGAGCATCACGAGAATTCCGCTCGCGGTGGGCGCAATCAACATGTGTGCTCAACGCCTTACGGCATCACCGCGAGCATCACCCGTGGCGGTTCAGCACGTGTGCCGCCTCGTGCAGCCAGTGCTCAACGCCTTACGGCATCACCGCGAGCATCACCGCCACGGTGCGCTCCGATGGCGATGACGTTGCCGTACTGTGCTCAACGCCTTACGGCATCACCGCGAGCATCACGTCCCTTCGCAAGCGGATTGCCAAGGCCGCGAAGTGTGCTCAACGCCTTACGGCATCACCGCGAGCATCACACGCCATCAGCAACACAAAGAGTCCCAGCAACCAGTGCTCAACGCCTTACGGCATCACCGCGAGCATCACCTGGCTGACGTGCTCGGGGGGCCTCTGCGCCCAGCTGTGCTCAACGCCTTACGGCATCACCGCGAGCATCACTACGAGCGCCAGAACGGGTAGATGGCGAACAGCACGGTGCTCAACGCCTTACGGCATCACCGCGAGCATCACTTGGAGCCAACGTTTCCACCGCGTCGCGAAGATGTGCTCAACGCCTTACGGCATCACCGCGAGCATCACCTCGGAGGCCGAGACCTCCGAGTTCGTGGAGGCGTTGTGCTCAACGCCTTACGGCATCACCGCGAGCATCACGACCTGGGGTACGCGCAGATCCGGCGGATGCCCTTGTGCTCAACGCCTTACGGCATCACCGCGAGCATCACCCGAAATGGCGGACTCCGCGAACGCCGTGCTGCCGTGCTCAACGCCTTACGGCATCACCGCGAGCATCACCGATGGCGGCGACGTCCCCCTGACGCGCCCTTTCGACGTGCTCAACGCCTTACGGCATCACCGCGAGCATCACAGTAGAAGTCCCCGCCTCCCGCCATCGGCGCATTCGCGTGCTCAACGCCTTACGGCATCACCGCGAGCATCACTGAGCAGCCGCTTTGGGCTCTACGATCGACCACCTGGTGCTCAACGCCTTACGGCATCACCGCGAGCATCACCGTCGTGGCGTGCGACGGGTGCGGCGCGTACAGCCGGTGCTCAACGCCTTACGGCATCACCGCGAGCATCACTTCCACGGAGCGGGCGAGACACTTCAACTTTGAGATGTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC

>NZ_CP012159|30|26|7109204-7114398|CRISPRCasFinder
GTGCTCAGCGCCTCACGGCATCACTGCGATGCATCA	CCCGTGGACCACACCTGCCGCAGTTCTCGTTGTCAGA
GTGCTCAACACCTTGCGGCATCACCGCGAGCATCAC	CCGCTTGCGACCGCACCTCCAGTCGCTCACCGTCA
GTGCTCAACGCCTTACGGCATCACCGGGAGATCGCC	TGGCTCAAGCTCCAGATCGCGGTGATGCTCA
ACGCCTTATTAATTCCAGCATCACCGCGAGCATCAC	GGGTCCGCGATGAGAGCGCCGTGGCTGTCCGAGCA
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	TGACCAGCAGGATCGGCCTCGTGCAGCCGCTGCAT
GTGCTCAACGCCTTACGGCATCACTCCTTGACGGGC	GCGGGCCCGATGCGGACCGACTGG
GTGCTCAACGCCTTACGGCATCACTGCGAGCATCAC	TGGCGAGAAGCGCCTGCGCGAGAAGCGTCAGCGCTA
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CTTCTCGGTGGCTGCGGGCCTCGACCGCTTCGCCGC
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	TCCGGATCCCAGCGCGGCCGTTCGTCGGCCCGGT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CTCCATCGAGCATGCCCCCAACAGCAGCAAACA
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CGCCGCTGAAAAGGAGACCACCGACTCAATCCCACGCA
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	GAGGAGGCAGACCGTGACGCTGCCTGAGCTTCCCGA
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CCCACGGAAGCCCACTTGGCGACCTGTCCCGGCGG
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CTTTGGCTCTTCCACCATTGCGCCATGTTAACGAT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	TTCGCGACGCTCACGCCACCGTCGCGCGCCTGGAC
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	AGCGTCTCGAGGGTGGCGTAGGCGGCGGTGGCGTC
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	AGGGAGGCTCTGGTCGGCCCGCTCCGGGCACTGGA
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	GTCAAGCGGCATGGGCTCCTGGCCAGGGGAGAAGAA
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	GGGAAGGGAACGCGGCCGGTGTCGTGGATCGTGAT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	GTCAATGGTCATCTCGTCCGCAAGTAGAACGTAAAT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	GCCAGGTCGCAGAGCACCTCGAACAGCTCGCCACC
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	TGCCGGAGCCTGACACCCGTCCAGACGCTTCCAGAGC
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	TTGGCGTCATCCCCGCCGGCAACCTTGAATACAGG
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CACCGCGTCGGGGCAATTGTGCCCAGCGATTACGT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CACCGCGTCGGGGCAATTGTGCCCAGCGATTACGT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	GAGAGGGTCGCGGCAGCGATTGCAAAGTACAGCTTCGT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	ATCGATGGTATCGGACGAATCCGACCACCTCGTGCAGA
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	TATTGTCCTGCACTGCGCCAGACCACACCTTTTCCCC
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CCTGCACCGCCTCCGCCAGTTCACCAACGCTCTT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	GCTCCAGCGGGAAGGCCATGGGGTGCTTCGGGAGCC
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	GCTCATGGACGAGTGGGACACCGACGTGTTCCTCCAGAG
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	TTGCCAGTGACCGTGCTCTTGTCGAGCATCCCTGT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	GTCGCGACCGGCGATGATCCGCGGTCGTCTCCGAA
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CTCGACAGTGAGCCCCAGGGATCGGGACAACCACCG
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CGTTGCGACAACGGGGGATGGGTCCAGGCACCCGCACG
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CGCCCGTGAGCCCCTCCAGCTTCACAGCTAGTTCTTCC
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	GGAGCATCACAATCCGCTCGGCGACGCGGCTTTCGT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	TCACGCGCTTCCTTGAGCGTGGTCGTGCACCCGATGAG
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CGACTCCTCCGCCTACAGCTCAACCAGTGAGCGCAT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	TGCTCAACCTGCGACAGCTTGTAGATCACAAGTCTGT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CCTTTGGGGGCCCGGCGATCGTGGTGCGCCGCTGGTA
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	AAGGTCATGGCCTGGGGGATCAACACCGTCTTCGG
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	GCCAGGAATGGGCTTCATTGCAGGAGCGGTTAGCTC
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	TCCGCAGGGTGGGTGTCACAGCGGGCGCAGTGAA
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	GTGGTCGGCCCCGTGACGGGGGCGATGGCTGCTGC
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	ACCCCCTTGAGGCGCACGTCGCTGATCGTCGCGTAACT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	ACGAGCGTGTTGGTAGTTAAGACCCTGCTTAACCT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CAGCCACTCGCGGCAGGTTTGCGTACGAAGTGAGATG
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	ATCAGGATCCCCACGCCGCCAGGATTCGCGGCCATAGT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CGCTGGTGGCGTTTCGCATTTTGAGGTGATTATGGG
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	AGGCGAAGGTGACGCCAGTGCCAGGGACGGCGTAGGA
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CCACGGGAAAGTCCCGCGCTCGGACAAGGCCTTCAT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	GCGAGCGCTGCGTCCAATCCGTGCGGCGCCTGCC
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	AGGGCGTGAGGGAAACTTCGGCATCATGCAACGCCCA
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	TCAGGTCGCGCGCGACACCGGTCCGGTCAACATGT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	TATTCAAGGACTACAAGCTCGACATGCTCGTCAT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	GAGAATTCCGCTCGCGGTGGGCGCAATCAACATGT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CCGTGGCGGTTCAGCACGTGTGCCGCCTCGTGCAGCCA
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CGCCACGGTGCGCTCCGATGGCGATGACGTTGCCGTACT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	GTCCCTTCGCAAGCGGATTGCCAAGGCCGCGAAGT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	ACGCCATCAGCAACACAAAGAGTCCCAGCAACCA
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CTGGCTGACGTGCTCGGGGGGCCTCTGCGCCCAGCT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	TACGAGCGCCAGAACGGGTAGATGGCGAACAGCACG
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	TTGGAGCCAACGTTTCCACCGCGTCGCGAAGAT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CTCGGAGGCCGAGACCTCCGAGTTCGTGGAGGCGTT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	GACCTGGGGTACGCGCAGATCCGGCGGATGCCCTT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CCGAAATGGCGGACTCCGCGAACGCCGTGCTGCC
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CGATGGCGGCGACGTCCCCCTGACGCGCCCTTTCGAC
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	AGTAGAAGTCCCCGCCTCCCGCCATCGGCGCATTCGC
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	TGAGCAGCCGCTTTGGGCTCTACGATCGACCACCTG
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CGTCGTGGCGTGCGACGGGTGCGGCGCGTACAGCCG
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	TTCCACGGAGCGGGCGAGACACTTCAACTTTGAGAT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC

>NZ_CP012159|30|7|7109204-7114398|CRT
GTGCTCAGCGCCTCACGGCATCACTGCGATGCATCA	CCCGTGGACCACACCTGCCGCAGTTCTCGTTGTCAGA
GTGCTCAACACCTTGCGGCATCACCGCGAGCATCAC	CCGCTTGCGACCGCACCTCCAGTCGCTCACCGTCA
GTGCTCAACGCCTTACGGCATCACCGGGAGATCGCC	TGGCTCAAGCTCCAGATCGCGGTG
ATGCTCAACGCCTTATTAATTCCAGCATCACCGCGA	GCATCACGGGTCCGCGATGAGAGCGCCGTGGCTGTCCGAGCA
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	TGACCAGCAGGATCGGCCTCGTGCAGCCGCTGCAT
GTGCTCAACGCCTTACGGCATCACTCCTTGACGGGC	GCGGGCCCGATGCGGACCGACTGG
GTGCTCAACGCCTTACGGCATCACTGCGAGCATCAC	TGGCGAGAAGCGCCTGCGCGAGAAGCGTCAGCGCTA
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CTTCTCGGTGGCTGCGGGCCTCGACCGCTTCGCCGC
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	TCCGGATCCCAGCGCGGCCGTTCGTCGGCCCGGT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CTCCATCGAGCATGCCCCCAACAGCAGCAAACA
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CGCCGCTGAAAAGGAGACCACCGACTCAATCCCACGCA
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	GAGGAGGCAGACCGTGACGCTGCCTGAGCTTCCCGA
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CCCACGGAAGCCCACTTGGCGACCTGTCCCGGCGG
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CTTTGGCTCTTCCACCATTGCGCCATGTTAACGAT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	TTCGCGACGCTCACGCCACCGTCGCGCGCCTGGAC
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	AGCGTCTCGAGGGTGGCGTAGGCGGCGGTGGCGTC
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	AGGGAGGCTCTGGTCGGCCCGCTCCGGGCACTGGA
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	GTCAAGCGGCATGGGCTCCTGGCCAGGGGAGAAGAA
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	GGGAAGGGAACGCGGCCGGTGTCGTGGATCGTGAT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	GTCAATGGTCATCTCGTCCGCAAGTAGAACGTAAAT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	GCCAGGTCGCAGAGCACCTCGAACAGCTCGCCACC
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	TGCCGGAGCCTGACACCCGTCCAGACGCTTCCAGAGC
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	TTGGCGTCATCCCCGCCGGCAACCTTGAATACAGG
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CACCGCGTCGGGGCAATTGTGCCCAGCGATTACGT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CACCGCGTCGGGGCAATTGTGCCCAGCGATTACGT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	GAGAGGGTCGCGGCAGCGATTGCAAAGTACAGCTTCGT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	ATCGATGGTATCGGACGAATCCGACCACCTCGTGCAGA
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	TATTGTCCTGCACTGCGCCAGACCACACCTTTTCCCC
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CCTGCACCGCCTCCGCCAGTTCACCAACGCTCTT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	GCTCCAGCGGGAAGGCCATGGGGTGCTTCGGGAGCC
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	GCTCATGGACGAGTGGGACACCGACGTGTTCCTCCAGAG
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	TTGCCAGTGACCGTGCTCTTGTCGAGCATCCCTGT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	GTCGCGACCGGCGATGATCCGCGGTCGTCTCCGAA
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CTCGACAGTGAGCCCCAGGGATCGGGACAACCACCG
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CGTTGCGACAACGGGGGATGGGTCCAGGCACCCGCACG
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CGCCCGTGAGCCCCTCCAGCTTCACAGCTAGTTCTTCC
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	GGAGCATCACAATCCGCTCGGCGACGCGGCTTTCGT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	TCACGCGCTTCCTTGAGCGTGGTCGTGCACCCGATGAG
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CGACTCCTCCGCCTACAGCTCAACCAGTGAGCGCAT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	TGCTCAACCTGCGACAGCTTGTAGATCACAAGTCTGT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CCTTTGGGGGCCCGGCGATCGTGGTGCGCCGCTGGTA
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	AAGGTCATGGCCTGGGGGATCAACACCGTCTTCGG
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	GCCAGGAATGGGCTTCATTGCAGGAGCGGTTAGCTC
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	TCCGCAGGGTGGGTGTCACAGCGGGCGCAGTGAA
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	GTGGTCGGCCCCGTGACGGGGGCGATGGCTGCTGC
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	ACCCCCTTGAGGCGCACGTCGCTGATCGTCGCGTAACT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	ACGAGCGTGTTGGTAGTTAAGACCCTGCTTAACCT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CAGCCACTCGCGGCAGGTTTGCGTACGAAGTGAGATG
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	ATCAGGATCCCCACGCCGCCAGGATTCGCGGCCATAGT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CGCTGGTGGCGTTTCGCATTTTGAGGTGATTATGGG
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	AGGCGAAGGTGACGCCAGTGCCAGGGACGGCGTAGGA
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CCACGGGAAAGTCCCGCGCTCGGACAAGGCCTTCAT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	GCGAGCGCTGCGTCCAATCCGTGCGGCGCCTGCC
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	AGGGCGTGAGGGAAACTTCGGCATCATGCAACGCCCA
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	TCAGGTCGCGCGCGACACCGGTCCGGTCAACATGT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	TATTCAAGGACTACAAGCTCGACATGCTCGTCAT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	GAGAATTCCGCTCGCGGTGGGCGCAATCAACATGT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CCGTGGCGGTTCAGCACGTGTGCCGCCTCGTGCAGCCA
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CGCCACGGTGCGCTCCGATGGCGATGACGTTGCCGTACT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	GTCCCTTCGCAAGCGGATTGCCAAGGCCGCGAAGT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	ACGCCATCAGCAACACAAAGAGTCCCAGCAACCA
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CTGGCTGACGTGCTCGGGGGGCCTCTGCGCCCAGCT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	TACGAGCGCCAGAACGGGTAGATGGCGAACAGCACG
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	TTGGAGCCAACGTTTCCACCGCGTCGCGAAGAT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CTCGGAGGCCGAGACCTCCGAGTTCGTGGAGGCGTT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	GACCTGGGGTACGCGCAGATCCGGCGGATGCCCTT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CCGAAATGGCGGACTCCGCGAACGCCGTGCTGCC
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CGATGGCGGCGACGTCCCCCTGACGCGCCCTTTCGAC
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	AGTAGAAGTCCCCGCCTCCCGCCATCGGCGCATTCGC
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	TGAGCAGCCGCTTTGGGCTCTACGATCGACCACCTG
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CGTCGTGGCGTGCGACGGGTGCGGCGCGTACAGCCG
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	TTCCACGGAGCGGGCGAGACACTTCAACTTTGAGAT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC

>NZ_CP012159|30|5|7109486-7109654|PILER-CR
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCACTG	ACCAGCAGGATCGGCCTCGTGCAGCCGCTGCAT
GTGCTCAACGCCTTACGGCATCACTCCTTGACGGGCGC	GGGCCCGATGCGGACCGACTGGGTGCTCAACGCCTT
ACGGCATCACTGCGAGCATCACTGGCGAGAAGCGCCTGCGCGAGAAGCGTCAGCGCTAGTGCTCAACGCCTTACGGCATCACCGCGAGCATCACCTTCTCGGTGGCTGCGGGCCTCGACCGCTTCGCCGCGTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	TCCGGATCCCAGCGCGGCCGTTCGTCGGCCCGGT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CTCCATCGAGCATGCCCCCAACAGCAGCAAACA
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CGCCGCTGAAAAGGAGACCACCGACTCAATCCCACGCA
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	GAGGAGGCAGACCGTGACGCTGCCTGAGCTTCCCGA
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CCCACGGAAGCCCACTTGGCGACCTGTCCCGGCGG
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CTTTGGCTCTTCCACCATTGCGCCATGTTAACGAT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	TTCGCGACGCTCACGCCACCGTCGCGCGCCTGGAC
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	AGCGTCTCGAGGGTGGCGTAGGCGGCGGTGGCGTC
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	AGGGAGGCTCTGGTCGGCCCGCTCCGGGCACTGGA
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	GTCAAGCGGCATGGGCTCCTGGCCAGGGGAGAAGAA
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	GGGAAGGGAACGCGGCCGGTGTCGTGGATCGTGAT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	GTCAATGGTCATCTCGTCCGCAAGTAGAACGTAAAT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	GCCAGGTCGCAGAGCACCTCGAACAGCTCGCCACC
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	TGCCGGAGCCTGACACCCGTCCAGACGCTTCCAGAGC
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	TTGGCGTCATCCCCGCCGGCAACCTTGAATACAGG
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CACCGCGTCGGGGCAATTGTGCCCAGCGATTACGT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CACCGCGTCGGGGCAATTGTGCCCAGCGATTACGT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	GAGAGGGTCGCGGCAGCGATTGCAAAGTACAGCTTCGT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	ATCGATGGTATCGGACGAATCCGACCACCTCGTGCAGA
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	TATTGTCCTGCACTGCGCCAGACCACACCTTTTCCCC
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CCTGCACCGCCTCCGCCAGTTCACCAACGCTCTT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	GCTCCAGCGGGAAGGCCATGGGGTGCTTCGGGAGCC
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	GCTCATGGACGAGTGGGACACCGACGTGTTCCTCCAGAG
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	TTGCCAGTGACCGTGCTCTTGTCGAGCATCCCTGT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	GTCGCGACCGGCGATGATCCGCGGTCGTCTCCGAA
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CTCGACAGTGAGCCCCAGGGATCGGGACAACCACCG
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CGTTGCGACAACGGGGGATGGGTCCAGGCACCCGCACG
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CGCCCGTGAGCCCCTCCAGCTTCACAGCTAGTTCTTCC
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	GGAGCATCACAATCCGCTCGGCGACGCGGCTTTCGT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	TCACGCGCTTCCTTGAGCGTGGTCGTGCACCCGATGAG
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CGACTCCTCCGCCTACAGCTCAACCAGTGAGCGCAT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	TGCTCAACCTGCGACAGCTTGTAGATCACAAGTCTGT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CCTTTGGGGGCCCGGCGATCGTGGTGCGCCGCTGGTA
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	AAGGTCATGGCCTGGGGGATCAACACCGTCTTCGG
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	GCCAGGAATGGGCTTCATTGCAGGAGCGGTTAGCTC
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	TCCGCAGGGTGGGTGTCACAGCGGGCGCAGTGAA
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	GTGGTCGGCCCCGTGACGGGGGCGATGGCTGCTGC
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	ACCCCCTTGAGGCGCACGTCGCTGATCGTCGCGTAACT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	ACGAGCGTGTTGGTAGTTAAGACCCTGCTTAACCT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CAGCCACTCGCGGCAGGTTTGCGTACGAAGTGAGATG
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	ATCAGGATCCCCACGCCGCCAGGATTCGCGGCCATAGT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CGCTGGTGGCGTTTCGCATTTTGAGGTGATTATGGG
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	AGGCGAAGGTGACGCCAGTGCCAGGGACGGCGTAGGA
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CCACGGGAAAGTCCCGCGCTCGGACAAGGCCTTCAT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	GCGAGCGCTGCGTCCAATCCGTGCGGCGCCTGCC
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	AGGGCGTGAGGGAAACTTCGGCATCATGCAACGCCCA
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	TCAGGTCGCGCGCGACACCGGTCCGGTCAACATGT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	TATTCAAGGACTACAAGCTCGACATGCTCGTCAT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	GAGAATTCCGCTCGCGGTGGGCGCAATCAACATGT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CCGTGGCGGTTCAGCACGTGTGCCGCCTCGTGCAGCCA
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CGCCACGGTGCGCTCCGATGGCGATGACGTTGCCGTACT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	GTCCCTTCGCAAGCGGATTGCCAAGGCCGCGAAGT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	ACGCCATCAGCAACACAAAGAGTCCCAGCAACCA
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CTGGCTGACGTGCTCGGGGGGCCTCTGCGCCCAGCT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	TACGAGCGCCAGAACGGGTAGATGGCGAACAGCACG
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	TTGGAGCCAACGTTTCCACCGCGTCGCGAAGAT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CTCGGAGGCCGAGACCTCCGAGTTCGTGGAGGCGTT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	GACCTGGGGTACGCGCAGATCCGGCGGATGCCCTT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CCGAAATGGCGGACTCCGCGAACGCCGTGCTGCC
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CGATGGCGGCGACGTCCCCCTGACGCGCCCTTTCGAC
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	AGTAGAAGTCCCCGCCTCCCGCCATCGGCGCATTCGC
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	TGAGCAGCCGCTTTGGGCTCTACGATCGACCACCTG
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CGTCGTGGCGTGCGACGGGTGCGGCGCGTACAGCCG
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	TTCCACGGAGCGGGCGAGACACTTCAACTTTGAGAT


>NZ_CP012159|30|6|7109761-7114398|PILER-CR
	ACCAGCAGGATCGGCCTCGTGCAGCCGCTGCAT
GTGCTCAACGCCTTACGGCATCACTCCTTGACGGGCGC	GGGCCCGATGCGGACCGACTGGGTGCTCAACGCCTT
ACGGCATCACTGCGAGCATCACTGGCGAGAAGCGCCTGCGCGAGAAGCGTCAGCGCTAGTGCTCAACGCCTTACGGCATCACCGCGAGCATCACCTTCTCGGTGGCTGCGGGCCTCGACCGCTTCGCCGCGTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	TCCGGATCCCAGCGCGGCCGTTCGTCGGCCCGGT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CTCCATCGAGCATGCCCCCAACAGCAGCAAACA
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CGCCGCTGAAAAGGAGACCACCGACTCAATCCCACGCA
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	GAGGAGGCAGACCGTGACGCTGCCTGAGCTTCCCGA
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CCCACGGAAGCCCACTTGGCGACCTGTCCCGGCGG
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CTTTGGCTCTTCCACCATTGCGCCATGTTAACGAT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	TTCGCGACGCTCACGCCACCGTCGCGCGCCTGGAC
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	AGCGTCTCGAGGGTGGCGTAGGCGGCGGTGGCGTC
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	AGGGAGGCTCTGGTCGGCCCGCTCCGGGCACTGGA
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	GTCAAGCGGCATGGGCTCCTGGCCAGGGGAGAAGAA
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	GGGAAGGGAACGCGGCCGGTGTCGTGGATCGTGAT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	GTCAATGGTCATCTCGTCCGCAAGTAGAACGTAAAT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	GCCAGGTCGCAGAGCACCTCGAACAGCTCGCCACC
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	TGCCGGAGCCTGACACCCGTCCAGACGCTTCCAGAGC
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	TTGGCGTCATCCCCGCCGGCAACCTTGAATACAGG
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CACCGCGTCGGGGCAATTGTGCCCAGCGATTACGT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CACCGCGTCGGGGCAATTGTGCCCAGCGATTACGT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	GAGAGGGTCGCGGCAGCGATTGCAAAGTACAGCTTCGT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	ATCGATGGTATCGGACGAATCCGACCACCTCGTGCAGA
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	TATTGTCCTGCACTGCGCCAGACCACACCTTTTCCCC
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CCTGCACCGCCTCCGCCAGTTCACCAACGCTCTT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	GCTCCAGCGGGAAGGCCATGGGGTGCTTCGGGAGCC
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	GCTCATGGACGAGTGGGACACCGACGTGTTCCTCCAGAG
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	TTGCCAGTGACCGTGCTCTTGTCGAGCATCCCTGT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	GTCGCGACCGGCGATGATCCGCGGTCGTCTCCGAA
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CTCGACAGTGAGCCCCAGGGATCGGGACAACCACCG
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CGTTGCGACAACGGGGGATGGGTCCAGGCACCCGCACG
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CGCCCGTGAGCCCCTCCAGCTTCACAGCTAGTTCTTCC
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	GGAGCATCACAATCCGCTCGGCGACGCGGCTTTCGT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	TCACGCGCTTCCTTGAGCGTGGTCGTGCACCCGATGAG
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CGACTCCTCCGCCTACAGCTCAACCAGTGAGCGCAT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	TGCTCAACCTGCGACAGCTTGTAGATCACAAGTCTGT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CCTTTGGGGGCCCGGCGATCGTGGTGCGCCGCTGGTA
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	AAGGTCATGGCCTGGGGGATCAACACCGTCTTCGG
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	GCCAGGAATGGGCTTCATTGCAGGAGCGGTTAGCTC
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	TCCGCAGGGTGGGTGTCACAGCGGGCGCAGTGAA
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	GTGGTCGGCCCCGTGACGGGGGCGATGGCTGCTGC
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	ACCCCCTTGAGGCGCACGTCGCTGATCGTCGCGTAACT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	ACGAGCGTGTTGGTAGTTAAGACCCTGCTTAACCT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CAGCCACTCGCGGCAGGTTTGCGTACGAAGTGAGATG
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	ATCAGGATCCCCACGCCGCCAGGATTCGCGGCCATAGT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CGCTGGTGGCGTTTCGCATTTTGAGGTGATTATGGG
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	AGGCGAAGGTGACGCCAGTGCCAGGGACGGCGTAGGA
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CCACGGGAAAGTCCCGCGCTCGGACAAGGCCTTCAT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	GCGAGCGCTGCGTCCAATCCGTGCGGCGCCTGCC
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	AGGGCGTGAGGGAAACTTCGGCATCATGCAACGCCCA
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	TCAGGTCGCGCGCGACACCGGTCCGGTCAACATGT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	TATTCAAGGACTACAAGCTCGACATGCTCGTCAT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	GAGAATTCCGCTCGCGGTGGGCGCAATCAACATGT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CCGTGGCGGTTCAGCACGTGTGCCGCCTCGTGCAGCCA
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CGCCACGGTGCGCTCCGATGGCGATGACGTTGCCGTACT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	GTCCCTTCGCAAGCGGATTGCCAAGGCCGCGAAGT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	ACGCCATCAGCAACACAAAGAGTCCCAGCAACCA
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CTGGCTGACGTGCTCGGGGGGCCTCTGCGCCCAGCT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	TACGAGCGCCAGAACGGGTAGATGGCGAACAGCACG
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	TTGGAGCCAACGTTTCCACCGCGTCGCGAAGAT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CTCGGAGGCCGAGACCTCCGAGTTCGTGGAGGCGTT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	GACCTGGGGTACGCGCAGATCCGGCGGATGCCCTT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CCGAAATGGCGGACTCCGCGAACGCCGTGCTGCC
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CGATGGCGGCGACGTCCCCCTGACGCGCCCTTTCGAC
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	AGTAGAAGTCCCCGCCTCCCGCCATCGGCGCATTCGC
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	TGAGCAGCCGCTTTGGGCTCTACGATCGACCACCTG
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	CGTCGTGGCGTGCGACGGGTGCGGCGCGTACAGCCG
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC	TTCCACGGAGCGGGCGAGACACTTCAACTTTGAGAT
GTGCTCAACGCCTTACGGCATCACCGCGAGCATCAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012159.1\|WP_050432938.1\|7117728_7118325_-\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|99749
NZ_CP012159.1\|WP_050432930.1\|7099887_7101561_-\|type-I-MYXAN-CRISPR-associated-endonuclease-Cas4/Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|274899
NZ_CP012159.1\|WP_050432937.1\|7117004_7117610_-\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|99749
NZ_CP012159.1\|WP_050432944.1\|7129124_7131281_+\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|366149
NZ_CP012159.1\|WP_050432940.1\|7120660_7121611_-\|dioxygenase	unknown	unknown	gnl\|CDD\|153375
NZ_CP012159.1\|WP_050432929.1\|7099504_7099801_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP012159.1\|WP_156338873.1\|7091879_7092896_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_169796656.1\|7118482_7119988_-\|trypsin-like-peptidase-domain-containing-protein	unknown	unknown	gnl\|CDD\|379142
NZ_CP012159.1\|WP_050432931.1\|7102006_7102711_-\|CRISPR-associated-protein-Cas5	unknown	unknown	gnl\|CDD\|274218
NZ_CP012159.1\|WP_050432933.1\|7103661_7105410_-\|type-I-MYXAN-CRISPR-associated-protein-Cmx8	cas8b3	mkCas0177_cas8b3_CAS-I-B	gnl\|CDD\|275206
NZ_CP012159.1\|WP_050432932.1\|7102711_7103635_-\|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	cas7	cd09687_cas7_CAS-I-B	gnl\|CDD\|187818
NZ_CP012159.1\|WP_050432942.1\|7124054_7125941_-\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP012159.1\|WP_050432935.1\|7107844_7108690_-\|type-I-MYXAN-CRISPR-associated-protein-Cas6/Cmx6	cas6	cd09703_cas6_CAS-I:CAS-III	gnl\|CDD\|370559
NZ_CP012159.1\|WP_082362797.1\|7128306_7128996_+\|DUF4956-domain-containing-protein	unknown	unknown	gnl\|CDD\|379819
NZ_CP012159.1\|WP_156339345.1\|7105508_7107827_-\|CRISPR-associated-helicase-Cas3'	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|273707
NZ_CP012159.1\|WP_050432925.1\|7090821_7091883_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050432941.1\|7121867_7123799_-\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP012159.1\|WP_050432928.1\|7093676_7095398_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050432943.1\|7126598_7128230_+\|CotH-kinase-family-protein	unknown	unknown	gnl\|CDD\|378045
NZ_CP012159.1\|WP_050432936.1\|7115955_7116765_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|273261

Protein	Function_ID	Function_description	E-value
NZ_CP012159.1\|WP_050432930.1\|7099887_7101561_-\|type-I-MYXAN-CRISPR-associated-endonuclease-Cas4/Cas1	gnl\|CDD\|274899	TIGR03983, hypothetical_protein_LA3181, CRISPR-associated endonuclease Cas1, subtype MYXAN. Members of this protein are the Cas1 endonuclease, or Cas1 domain in Cas4/Cas1 fusion proteins, of the MYXAN subtype of CRISPR/Cas systems. These systems typically feature repeats and spacers each about 36 base pairs in length. Species with this type of CRISPR system include Myxococcus xanthus, Cyanothece sp., Leptospira interrogans, Sorangium cellulosum, Anabaena variabilis ATCC 29413, etc.	0
NZ_CP012159.1\|WP_050432937.1\|7117004_7117610_-\|Uma2-family-endonuclease	gnl\|CDD\|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	3.2785e-32
NZ_CP012159.1\|WP_050432944.1\|7129124_7131281_+\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|366149	pfam00529, HlyD, HlyD membrane-fusion protein of T1SS. HlyD is a component of the prototypical alpha-haemolysin (HlyA) bacterial type I secretion system, along with the other components HlyB and TolC. HlyD and HlyB are inner-membrane proteins and specific components of the transport apparatus of alpha-haemolysin. HlyD is anchored in the cytoplasmic membrane by a single transmembrane domain and has a large periplasmic domain within the carboxy-terminal 100 amino acids, HlyB and HlyD form a stable complex that binds the recombinant protein bearing a C-terminal HlyA signal sequence and ATP in the cytoplasm. HlyD, HlyB and TolC combine to form the three-component ABC transporter complex that forms a trans-membrane channel or pore through which HlyA can be transferred directly to the extracellular medium. Cutinase has been shown to be transported effectively through this pore.	9.19893e-14
NZ_CP012159.1\|WP_050432940.1\|7120660_7121611_-\|dioxygenase	gnl\|CDD\|153375	cd07363, 45_DOPA_Dioxygenase, The Class III extradiol dioxygenase, 4,5-DOPA Dioxygenase, catalyzes the incorporation of both atoms of molecular oxygen into 4,5-dihydroxy-phenylalanine. This subfamily is composed of plant 4,5-DOPA Dioxygenase, the uncharacterized Escherichia coli protein Jw3007, and similar proteins. 4,5-DOPA Dioxygenase catalyzes the incorporation of both atoms of molecular oxygen into 4,5-dihydroxy-phenylalanine (4,5-DOPA). The reaction results in the opening of the cyclic ring between carbons 4 and 5 and producing an unstable seco-DOPA that rearranges to betalamic acid. 4,5-DOPA Dioxygenase is a key enzyme in the biosynthetic pathway of the plant pigment betalain. Homologs of DODA are present not only in betalain-producing plants but also in bacteria and archaea. This enzyme is a member of the class III extradiol dioxygenase family, a group of enzymes which use a non-heme Fe(II) to cleave aromatic rings between a hydroxylated carbon and an adjacent non-hydroxylated carbon.	3.04557e-109
NZ_CP012159.1\|WP_050432929.1\|7099504_7099801_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	1.2964e-16
NZ_CP012159.1\|WP_169796656.1\|7118482_7119988_-\|trypsin-like-peptidase-domain-containing-protein	gnl\|CDD\|379142	pfam13365, Trypsin_2, Trypsin-like peptidase domain. This family includes trypsin-like peptidase domains.	2.17138e-11
NZ_CP012159.1\|WP_050432931.1\|7102006_7102711_-\|CRISPR-associated-protein-Cas5	gnl\|CDD\|274218	TIGR02593, CRISPR-associated_protein_Cas5, CRISPR-associated protein Cas5, N-terminal domain. This model represents a shared N-terminal domain, about 43 amino acids in length, common to a number of related protein families each of which is associated with a distinct subtype of CRISPR/cas system, where CRISPR is an acronym for Clustered Regularly Interspaced Short Palindromic Repeat and Cas is an abbreviation for CRISPR-associated. Members of this family are widely distributed enough that we designated the family Cas5. Homology appears remote, or absent, between the more C-terminal regions different subfamilies of these proteins, which typically are 210 to 265 amino acids in total length. Cas5 proteins of six different CRISPR/cas subtypes so far defined are described by respective full-length models TIGR01868, TIGR01876, TIGR01895, TIGR01874, TIGR02586, and TIGR02592. The best characterized protein in this family is DevS or Myxococcus xanthus, a Cas protein that appears to participate in a species-specific developmental pathway.	2.27768e-05
NZ_CP012159.1\|WP_050432933.1\|7103661_7105410_-\|type-I-MYXAN-CRISPR-associated-protein-Cmx8	gnl\|CDD\|275206	TIGR04413, hypothetical_protein_LEP1GSC082_4029, CRISPR type MYXAN-associated protein Cmx8. Members of this family occur only in CRISPR/cas loci of the MYXAN type, but are present in a minority of such systems. This protein appears to replace the MYXAN system Cas8a1/Csx13 protein (TIGR03485/TIGR03486), compared to which it shows similar length and composition but only about 12 percent sequence identity.	0
NZ_CP012159.1\|WP_050432932.1\|7102711_7103635_-\|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	gnl\|CDD\|187818	cd09687, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas7 is a RAMP superfamily protein; Subunit of the Cascade complex; also known as Cst2/DevR family.	3.1316e-20
NZ_CP012159.1\|WP_050432942.1\|7124054_7125941_-\|serine/threonine-protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	7.71064e-54
NZ_CP012159.1\|WP_050432935.1\|7107844_7108690_-\|type-I-MYXAN-CRISPR-associated-protein-Cas6/Cmx6	gnl\|CDD\|370559	pfam09559, Cas6, Cas6 Crispr. The Cas6 Crispr family of proteins averaging 140 residues are characterized by having a GhGxxxxxGhG motif, where h indicates a hydrophobic residue, at the C-terminus. The CRISPR-Cas system is possibly a mechanism of defense against invading pathogens and plasmids that functions analogously to the RNA interference (RNAi) systems in eukaryotes.	3.90333e-77
NZ_CP012159.1\|WP_082362797.1\|7128306_7128996_+\|DUF4956-domain-containing-protein	gnl\|CDD\|379819	pfam16316, DUF4956, Domain of unknown function (DUF4956). This family consists of uncharacterized proteins around 220 residues in length and is mainly found in various Bacteroides species. The function of this protein is unknown.	2.07235e-07
NZ_CP012159.1\|WP_156339345.1\|7105508_7107827_-\|CRISPR-associated-helicase-Cas3'	gnl\|CDD\|273707	TIGR01587, CRISPR-associated_endonuclease/helicase_Cas3, CRISPR-associated helicase Cas3. This model represents the highly conserved core region of an alignment of Cas3, a protein found in association with CRISPR repeat elements in a broad range of bacteria and archaea. Cas3 appears to be a helicase, with regions found by pfam00270 (DEAD/DEAH box helicase) and pfam00271 (Helicase conserved C-terminal domain). Some but not all members have an N-terminal HD domain region (pfam01966) that is not included within this model.	8.87207e-48
NZ_CP012159.1\|WP_050432938.1\|7117728_7118325_-\|Uma2-family-endonuclease	gnl\|CDD\|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	1.70603e-30
NZ_CP012159.1\|WP_050432941.1\|7121867_7123799_-\|serine/threonine-protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	1.55351e-53
NZ_CP012159.1\|WP_050432943.1\|7126598_7128230_+\|CotH-kinase-family-protein	gnl\|CDD\|378045	pfam08757, CotH, CotH kinase protein. Members of this family include the spore coat protein H (cotH). This protein is an atypical protein kinase that phosphorylates CotB and CotG.	3.68325e-63
NZ_CP012159.1\|WP_050432936.1\|7115955_7116765_-\|hypothetical-protein	gnl\|CDD\|273261	TIGR00768, Tetrahydromethanopterin:alpha-L-glutamate_ligase, alpha-L-glutamate ligase, RimK family. This family, related to bacterial glutathione synthetases, contains at least three different alpha-L-glutamate ligases. One is RimK, as in E. coli, which adds additional Glu residues to the native Glu-Glu C-terminus of ribosomal protein S6, but not to Lys-Glu mutants. Most species with a member of this subfamily lack an S6 homolog ending in Glu-Glu, however. Members in Methanococcus jannaschii act instead as a tetrahydromethanopterin:alpha-l-glutamate ligase (MJ0620) and a gamma-F420-2:alpha-l-glutamate ligase (MJ1001).	4.39738e-10

>NZ_CP012159.1|WP_050432935.1|7107844_7108690_-|type-I-MYXAN-CRISPR-associated-protein-Cas6/Cmx6
MLDDPRDCPAAWQNPFPLRKTCFDDRGDAVRDPAVDQRRMRRAFSPSHASGSGKALGGAHGFRPHHSPEEVSVISDIPPRVDISFRLAAKLAPLDHGYALFSALCRLLGDLHGAEWLAVHPLPGTPRPDGLLAVDGRRGLRLRVDPAQIPRVLPLAGKWLDIGGHAARVGVSSVFPLASASTLRARLVTIKGFLEPEPFLEALQRQLDAMGVAGRPTAGRRRVLDVANDKVVGFGVELHGLTEDGALRVQALGLGGRRRMGCGVFVPATVDEASAGREHAS
>NZ_CP012159.1|WP_156339345.1|7105508_7107827_-|CRISPR-associated-helicase-Cas3'
MELLAKSPRGPRRLSLERHLVETEAAAVRLFDLSRRWGQAFCRFFRISEAHRERFLLNLRLAALFHDLGKANQDFMVAVTTRGAPAQALRHEHLSALILHLPEVRTWIARGPLVDVEVLTAAVLSHHLQAARSGDHTWGAPRGGREAVRLHLDHPQVKAILHHIAEVAGVGEPPTLGQRSWGLGDETWIAALREGKRAATALDRALRIDSERRSLLLAVKAGVIVADSVASGLHREDHPLEAWIDDVAHAPALTAEDVHTHILAPREKHLAKPGERFTYHRFQDRAAEQGPRALLLAACGAGKTLAAWRWAQEQAKSRPIGRVVFLYPTRGTATEGFRDYVSWAPEDMATLLHGSARYELEMMQENPSEGAKDKQFEHAEDRLFALGVWPRRYFSATVDQFLGFMEHSYQSLCLLPVLADAAVVIDEVHSFDRHMFDVLVSFLRHFDVPVLCMTATLPPSRRNELVQAGLRVYPSEEARVELADLEARERHPRYRIEAVAGAGEDVACAEAIAAYRRGDRVLWVVNQVGRCQRLARALEEALGEPVHCYHSRFTLKDRRERHNKTVAAFQQKERRALAVTTQVCEMSLDLDADVLITELSPVTALVQRFGRAHRRLDRSPEFRARLLWYPPERPEPYSRQDLTASTAFLASLGTENISQHQLAVALEEHALAERDADGSARFLQSGYYAVPGAFRDTDGGAATCILDRDLAQVKALHQKRDRLDPYLISIRRKFTLPDEQRPSWLPRHLGVAPSARYTEEFGFPTDEGAERS
>NZ_CP012159.1|WP_050432933.1|7103661_7105410_-|type-I-MYXAN-CRISPR-associated-protein-Cmx8
MKGQGRTKASRAERGGEEAASKGKPRAGVRGQEGTDEVAPEGPIELTYSLAELPSAQHRAGLAGLVMLVAWLARQPAKERGICSITRLEAGRVSLRLDLTGVKRLLDAMYDASHEEVAVQTPWKRRGGELVEPLRVEEREVQDPKSGTSKKKKFHIYPVVVPRGAFLVDHEPPTANGTTLWIKLWRDMVWAILRGIPTQRLPFEARAEERATTEHLDAWADLTGPADKAIKLPGTYFIGAQERSAENVGFRDLARQQFLLHFLPIALQVYVPRVVSIVDGTSESGGGYVIVVPDVADLATFCDELPRVLKERETDVAGFRPRAAVILLPAEGALDMARRLKARIASQEGRRSTADLLVALEVYHLEKQGNSVRLLGAWRLDLEDEILDEYTHLRGMRLRSDSFKRQRLLNLLDRAPWYRGFDRIAETTSYKEVTIGSKSFRHDARLSFEVAQKNREATMQQRDGKAPERLDIEEIVYSVARTYVSQKLSTKYGLEWKGEWKDSKADDARKSEYNAKKEKIAKEAFLAVRSRSGAAFASYFVGSLCSVPQYLSKARYEVVAHALAKEPDRVRTLTLLALSAAG
>NZ_CP012159.1|WP_050432932.1|7102711_7103635_-|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR
MSRSDKEKKTSPKNLFATVLTYAAPSSNYRGESEENRTILQKITRGNQEHTVISPESMRNALREILSGWGLPTNRRRLHDQDQLAVEFKEFPDATKYADDFLFGFMVADDKAIKANKGKRAKRDSVLRMNLAVSLTPYSFDATFHQSPLNAGESPWRNSASSALIHREIVDTAYQYPFALAGQDVFQEEQGPVWSRALLKALGQLSNVAGGHARSYYEMAPRSVVARLSANLVAGFDTYGFDAQGGFPELSRVKADDLPGDEIWLGGEVVRKLEKTERERLAAEGVHLHENPQALLEQLGAAAFGGR
>NZ_CP012159.1|WP_050432931.1|7102006_7102711_-|CRISPR-associated-protein-Cas5
MERLWLHVRAPFAAYRPLQAGVYRTSVPTIPYSAALGLLLNLAGIETRDPRPAVTTGMRDDVPRLRLAIGQLVTPGVSTLYQQLHSYPVGNSGKELEARTHGAKFWIVPVRREVLVGLDVVLGAEAEDPAILGRVRRGLRGELDEPRYGLPFAGDNSYLFDCLDVLNAPRPARWYTPILPEESLRRGSCRLPVSIHREDSSRTRTLLCAPTVEALGEPPEEAWIWTPSAPSSPA
>NZ_CP012159.1|WP_050432930.1|7099887_7101561_-|type-I-MYXAN-CRISPR-associated-endonuclease-Cas4/Cas1
METETAAPTLRVMSLHALVYCERLFYLEEVEELRVADEAVWEGRRLHVELDEPADVVEMTLESQALGLRGRMDAVRRRSGALYPIEHKRGRCRRGPGEIPAAWPTDVVQAAAYAMLLEEHTGAEVEEARVRYHKDNVTVRVPITDGERALVASYVARARYLTTTTERPPVTDDERKCVRCSLAPVCLPEEARFAEATGPETSPEHPSAPTPVRLYPPDTERRSLHVVSHGARVGRSGDCFQVVDRDAGRTRVGVREVSDIVLHGHAQITTQALRLCAAEEIPVHFVTASGAHVGMFAMGPGGVQRRIRQYRGLTDDGFTLSLARRLILAKVEMQLRHLLRSSRKEAALRELIAGTIDLMRGCLRRAAHATTREELMGQEGNAARAYFQAIARLVSPDAGEAFLPNGRSRRPPEDRFNALLSFGYALLYRDVLSAIQRVGLEPAFGVLHQPRSAAFPLALDLTELFRVPVVDMAVLGAVNRRTFHAERDFTVTGRQVWLSDEGRRAMLEVYERRKHEEYRHDALGFSLSYARMMELEVRLLEKEWSGEGGLFARFRIR
>NZ_CP012159.1|WP_050432929.1|7099504_7099801_-|CRISPR-associated-endonuclease-Cas2
MAEPRHWHLVMYDVSEPSTLRKVHKTLSAWGKPMQYSAFRVRGTARELARLRFELSAMIDGKDRLMVIRLCSGCAARVSVQGEALAPLEADPPPFRMV
>NZ_CP012159.1|WP_050432928.1|7093676_7095398_+|hypothetical-protein
MRRHARDWVRWHRGPQRTDSQNLASALTVLTVEELRTFITDALPRLDDGIRAQLEDLLLLRAARGGSGWKPPPPSAAIVENIRAFTAMARRQGSAEPAEVDDCLRQALTASLAGEHATARAVFDTLLHPITHGDIFLGQDELVDEVLSVDLEACVHHHIAAVYQTTPLPERASAILQALDASDGLAYLTDPLDAILQVLGKPPPDLDAFLPLWIDHLEREDSPSAMRSPRRERWFRAAVARQEGIPGLARIAHATKRPGDADAWCNALVAEGAWSRALAAYETSITLVESDVARGRYLDGAALAAQVLERKDLRKKLEAAWQQAPTLPRLLRWLMAGDPSTAVLRRRATAALAAPPSDAPPLLGLLHVLTGDLPSAAAHLTACPGLGWSRLDHPGHLLFASFAWLLGGAPTGSLREELTLVLRQPPGDAFELLPGVDLLPGVDLLPEVEEPARARKPVLHTPTVIDVLQRAEAISRLPLGAPKLILDALKAAAVQRTEGVLGEKRRRTYDHAARLIACCVELSDGPWGAGETTRWAEGLRLRAARFPAFQEALQAALGRARRAGMAAEVGSGA
>NZ_CP012159.1|WP_156338873.1|7091879_7092896_-|hypothetical-protein
MKSLHLLVAMGCVLATLVTCGRADEQRDVCEGTCCTGACDPCADGACEDTDALGWGPPVLLWWGDAATPAPGCPAWAPEVVYEGIDGLSAEQRCPSCACGPAACKLPAGLVVWDEFMCNAHDVPDPTFTTFPAPDPWDGSCVTHPTIPAGSFRSIRFLSTTLSPCTPVTGPEPMVAEPVWATHARACGEGNTPAEESVPREERVTPEGFRECLWRRGEPGPCPTHYPERRVFHEDIESSLGCTECACGEPMEGSCVAVVRLFHRPECDMTPGHSGGTAMGLHNAPCKGWLDGPSPITVGSISAKWNEQDPGRCEPSGGLPRGEVWTNEQTTFCCEGMR
>NZ_CP012159.1|WP_050432925.1|7090821_7091883_-|hypothetical-protein
MNSQDDPEPTLRQRTRARTLAWGTLGGLAVLFTLLPASCRLGRIMIYTCPDPCETCDDPCHPCIEALGECVPEAPFGWAGPVLVWAGPRAIEPPPCPDHAPSRVYQGYDGLSVERGCPRCSCGPITCLSPETIATSDRAVCLGDEPRDDDLHLPIPPLWSGSCLEVPAVDEADVASLSASETRVGACEPNVGPIPASDAFAWDFHAMACANEAAPRLCEDEANWCAPQLTGDFHQCVYTRGDEPTCPVGYPKRRVFFEGIDGSLACTACACDAPAVSECRVNVEAFRDPACNDSIGDVDPDLATRACTDLVLPGGLRSLSMTWTVDEPGACAPRGGSPTGRVTPDGPTTFCCL
>NZ_CP012159.1|WP_050432936.1|7115955_7116765_-|hypothetical-protein
METRFLFVTGEPAAALPLLKQRAGWGAVVSATSFAVTAGRLHRPRNTTDDFQGVLYFADVRDKDLERHTLRLLAEHAIPCWPAPELLLAASERHAALARCVAAGLVDHPVVQATHTPTPQLPFPYVLKVGEEHRGEGKFLIQSARDIPRWEGIASMEPFFQGTSVRVLLVGERAFGARIENAGSWIKNGPGASVEPWTPGEALVAHAREAMRVFGLAIAGVDYVVNAQGFHFIEVNPFPRVGLSKESLAAAQVRFGEAMEAVEREARGR
>NZ_CP012159.1|WP_050432937.1|7117004_7117610_-|Uma2-family-endonuclease
MGDPAEKRAPSATYADLVAAPAHLVAELVDGVLYTSPRPASPHAHAASVLGMDIGSPFQRGRGGPGGWHILYEPELHFGDDVLVPDLAGWRRERMPDLPQVAFFTLPPDWVCEVLSLSTASLDRTRKRPAYAAAGVTWLWLVDPLARMLEVFRLGPQKRWVVEQGFSGDAVVRASPFEAIELELSALWLPEAPERPEGEAP
>NZ_CP012159.1|WP_050432938.1|7117728_7118325_-|Uma2-family-endonuclease
MGHLAEKRPAPATYADLEAVPPHLVAEIVDGVLHTLPRPAPAHAHASSELVFELSGPFGHGRGGPGGWRILMEPELHLGADVLVPDLAGWRLDRMPRLPRAAHFTQPPDWICEVLSPSTSAYDRAEKLPAYAAAGVSWAWLLDPLLHSLEVFHIGPRERWVLEHVFRGEAAVHAAPFDAIALDLAALWPDLEDDDTNP
>NZ_CP012159.1|WP_169796656.1|7118482_7119988_-|trypsin-like-peptidase-domain-containing-protein
MRKRPLALMAACSLSASLLGCAVDGAADSENDLSPAQDPTEMSTDLVGVHVAASSTSSDPDAEGTDGVDLDDPQRPWGPNADAANRVLETEDLEAYAAEMGIKLGDGPDMTTKALCNGDDNLTFVNDFTGKHGISSRFVQREKIPVGIIRPIGCSGTLIAHDLFLTNAHCVPEDGAQVLAQTVQFGFEEDGELLESLPSQSFPVVNLLELRNQNLDYAIYRLGHLPGLIYGHNTVASGDPPSGSVISIIGHPAFRRKQVDVGHARYNVFLDRILYDDLDTLGGNSGSGILNAQGELTGLHYGGSCDGWFGYNYGEKMSNLLQASPLLRNTPRQLILSQGTDPTLYVIHGGARLAIASMDEFNALGFRAQDHRVLPPGALSSTPTVPRDGTVLVTPGGARHVVFGGARFPIHLLMEFTALGYSNPDMNPAPQLATQAIPLIPRDGTLLQERSHDPVYVVLGGIRYWIQNWTVFHARGYQKNRIRIIPDGSVAQIPFGGVLTS
>NZ_CP012159.1|WP_050432940.1|7120660_7121611_-|dioxygenase
MSNEPQEGLTRRRAVVAGIAGAATLATLHGVSGDDAQAHADPSNGGRPTPTPGRLPVAFLPHGGGPWPFVEMGLDRNEVDRLVQYLRGVRALPATPPKAVLVVSAHWEEPVPTVMTAARPPLYYDYYGFPPASYELTWPAPGDPTLAARVQALLGTAGFQTAANDERGFDHGTFIPLKLTYPDANLPTVQLSLKRGLDPAEHLAMGRALAPLRDEGVFILGSGMSYHNMRGFRDPRALPISEAFDAWLGETAALDPKARDQRLSQWSQAPGARLVHPREEHLLPLMVVAGAAGADRGTTAYNDVFMGVRLSAYHFG
>NZ_CP012159.1|WP_050432941.1|7121867_7123799_-|serine/threonine-protein-kinase
MDLRPGLRINRYTLVKPLGMGGQGTVWKVIDPLDGGAVRALKILLVRGLDEAAAARARREARALRHAGHPALVPCRELFEDPAEGIVGLVFDYARGHSLADFASDPRLTRGHRFAVLHHLADVLAHVHALGIVHRDLKPDNILITGSFWQDPHAAGGVKLLDFGIAVASGNPRPLTTHGAMVGTGPYLPPELLIPGVWTSPPEGFARDLFAFGVLAWDLVQGVHPTGLPPAASLADHADVFRLAHTGKLTWPPTPLEAPWGAVVSACLQLDPWARPSNGAALLSLLQDGGSNSGRTSSSGTESHSAVSARAGRRGAMDLLTPPPGSARVITEPAAPLPSQEGEVAELRRTPAPPPSTPVTMRTSPMPLPPVRSSRPEVTLEEPPSSLASRGHSAPYGWIVVGAGIGMAVVVGLVTASLSLERLAGRPAVPAEGEGDGPVEGTVTATSLQPLDPSTPLAPSTEPTPSAPLASPIPTVPPTWSPAPSEILPCCPKDGSACRSGRPCAPSSVCDDDLPDERVWKLRMIGAELEGPDGFQDMAAPRMYPYATICLSESLRPETEVCAPLTTITRTGDRQNRLPITTAALGRGEIHVRMFNPPHGILFEGDGVAPGKTKRTKLCGGMRFLSVSSRGVRARISVDLDDE
>NZ_CP012159.1|WP_050432942.1|7124054_7125941_-|serine/threonine-protein-kinase
MDLLPGRRINRFTLVRPLGEGGQGSVWKVIDPLDGGAVRALKLLLVRDLDEGAAQRARREARALIHATHPALVPCRELFEVPAEALVGLVFDYQRGRSLADLAADPRLTRVHRQTILVQLADALAHVHALGIVHRDIKPANVLITEAFWQAPDHPGGVKLLDFGIAVPVGNPHPMTSVGAMIGTGPYLPPELLLPGVWSIPPEGFQRDGFAFGVLAWDLLKGAHPTGLSPTASLAEYAAVYKQAHQGHVPWPPAGLEEPWRSAIRACLKLDPRARPAHGTALLELLPQTVSSAGHLRRIQSDEPAVVLRATEMHVSAPGAPKSITVSPTTPPRRETELSGPPVPSSRGSVLRRSTSVDASPRGAGTPALRFGWGLLSLGLVMSVAAVAWTGVVDARSLRSWFEGPSDVPQGNPGVPLPMAAASSTAAPTASSAASSLPASLPGDTAQAIGHGVRLVTNNGESGSVPRLEAPKLAPCCAKSKGPCSSGRACDPDPSCPEYLPLESRWWLRIISATRGEHPTVRNIAATQPGSSICLSRWQQPDTEVCAPLKRIVKSGGDRENRLLVTTRDLMAGDLQIRILGPKGQVEFERRTEQTKRLRSTVLCSNLSLRSGATTNAPITVSVVLDDE
>NZ_CP012159.1|WP_050432943.1|7126598_7128230_+|CotH-kinase-family-protein
MFLVPLAGCSGSSPGDDPGTGGSGGEGTGGDGGTGGAGGAGAGSSGTGASSGDPDYAGAFPQDRVARLDITITPANWQAMLDDMTELIGEFGQGGPGGPGGPGGPGGPGQLPPELIAACEGKVAGDACSATLNNNPITGTCAQLQLQGQQPTLMCMPAGGPGNGGPGNGGPGNGGGAIDLIGGTPIYVECDVKTEDREWKHVGIRFKGNNSLQSAWSGGVYKIPLRLNFDKFEDDYPETKNQKFYGFKDLSLSNGSSDQSLLREKLAMDVFREAGVPAPTTAFYRVFIDHGEGPVYFGLYTGMEMPDDDAFLKSTFGSKKGNVYKPDGGAATWATWDVDTLGLKTNETTADYADARALFDALHADRNDAAAWRTELEKRLDVEGFLHWLAVNTVIQDWDQYGRMAHNYYMYADPDRDAQLRWITWDHSFAFQSGGMGGGGLSLGMSEVGSQWPLIRFLLDDPVYEDIYRDFLAQTVAVEYEPIASEARFRSAHALISPYVVGPDGEIDGHTFLQSDASFTQALDTLVTHTHSREQAVTTFLAQ
>NZ_CP012159.1|WP_082362797.1|7128306_7128996_+|DUF4956-domain-containing-protein
MELTDLIEPLTRGDAFEWRTALVALLLSFGLGQAIAGIYLVTFRGLSYARTTVQGMAMGSVITCMLMLAIGTSIAAGIGVAGGLSVVRFRTTMRDPRDIIFVFAALGVGMACGLTAYGTAIAGTAVFGAGALLLHATGYGSKRQPDGLLRFTAPTGQAVEDAISKILREHCRSFSLVTLREAAQGTMMEHAYQLTVRAPELRSPLVSRLQAIQGVQDVSLLLQEPTLDL
>NZ_CP012159.1|WP_050432944.1|7129124_7131281_+|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit
MKMPYRFRGALQDAAPWLCLVSTLGLAAYLHVGGDARGHIVGFEQPTLEALAPTEIARVASIQVTLNEEVAPGQIVATLDSSLVDAEIAVARATVRQLEAQSEADQFLLEADRTASLEELQRELARQREEQLQAAAGAKALDEQLTRVRQLVQDRVAVLEDLNRLDVQHATVQALATEKPRTIGLLSRQIQAAEQRKHDAQEPPRVVAERLEADLSVARRNVELLEQRRAALTLRATHGGRVAGIDKQVGNVVAPGEPVVRVVDVRGSVVACVPERSAFGIVEGDTARLWIRGQNSAPLTGKVTALGPLVAELPIRCWPNPKTPLWGREISITMDNPMSLLAGQSFDIVFKSSHGGQVAMAAAPQGSSPPPLARTIQGALPASSTGGATLMTVPPALTTRSRFEPSGVLARPGEGRYLVISDDTGFDDGENDSAPWLFAMSAAGVVDPTPLVVEGVDQLVDVEAITAGDDGAIYLLSSQSYSRKGKRKRARTALLRLRAEGQGFRVDGEVHLAEMLDASPDRASQLGLPAGTRELDLEGLGFHKGALYVGLKAPLDARGNAMIWKIGDPKALFEGATKLASTAPAPEKGKGKGNGKGKDSKAPVDPRLLDAGAVSLWANARVDVDLAGKPTPGGISDLQFMPDGSLAITSTPSTADGDAGALWRVDSPQAGALTPRLVQRFPGLKPEGVAPSLSPGKVMIVFDTGARPPSYQELPWVR

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Crispr_ID: NZ_CP012159_31

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012159_31

7334036-7334116

Orphan

Consensus_repeat	Method
CCTCGGCACGCCGCCTCACGATTGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP012159_31

>merge|NZ_CP012159|31|7334036-7334116|CRISPRCasFinder
CCTCGGCACGCCGCCTCACGATTGCGTGATGCAAGCACCCCGCATTGCGTATCCCGCCTCGGCACGCCGCCCCACGATTGC

>NZ_CP012159|31|27|7334036-7334116|CRISPRCasFinder
CCTCGGCACGCCGCCTCACGATTGC	GTGATGCAAGCACCCCGCATTGCGTATCCCG
CCTCGGCACGCCGCCCCACGATTGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012159.1\|WP_050433047.1\|7349006_7349480_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_156338877.1\|7314041_7315328_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|341038
NZ_CP012159.1\|WP_050433032.1\|7308212_7312394_-\|amino-acid-adenylation-domain-containing-protein	unknown	unknown	gnl\|CDD\|237108
NZ_CP012159.1\|WP_169796659.1\|7331300_7332944_+\|protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP012159.1\|WP_050433031.1\|7306402_7308094_-\|cyclic-peptide-export-ABC-transporter	unknown	unknown	gnl\|CDD\|226968
NZ_CP012159.1\|WP_156338879.1\|7332968_7333889_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP012159.1\|WP_063796655.1\|7343844_7346013_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|197216
NZ_CP012159.1\|WP_050433042.1\|7336475_7338626_+\|M48-family-metalloprotease	unknown	unknown	gnl\|CDD\|320700
NZ_CP012159.1\|WP_156338878.1\|7316728_7321408_-\|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|225858
NZ_CP012159.1\|WP_050433037.1\|7329686_7330910_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|311960
NZ_CP012159.1\|WP_156338880.1\|7334507_7335920_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|271320
NZ_CP012159.1\|WP_156338881.1\|7339640_7339841_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050433033.1\|7312413_7313934_-\|tryptophan-7-halogenase	unknown	unknown	gnl\|CDD\|380163
NZ_CP012159.1\|WP_050433036.1\|7321439_7329197_-\|non-ribosomal-peptide-synthetase	unknown	unknown	gnl\|CDD\|237108
NZ_CP012159.1\|WP_050433044.1\|7340463_7342389_+\|right-handed-parallel-beta-helix-repeat-containing-protein	unknown	unknown	gnl\|CDD\|275079
NZ_CP012159.1\|WP_050436150.1\|7346033_7348952_+\|DEAD/DEAH-box-helicase-family-protein	unknown	unknown	gnl\|CDD\|350180
NZ_CP012159.1\|WP_050433035.1\|7315440_7316688_-\|cytochrome-P450	unknown	unknown	gnl\|CDD\|225035
NZ_CP012159.1\|WP_050433041.1\|7336023_7336479_+\|BlaI/MecI/CopY-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|367747
NZ_CP012159.1\|WP_063796654.1\|7339870_7340341_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP012159.1\|WP_050433045.1\|7342492_7343848_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP012159.1\|WP_156338877.1\|7314041_7315328_+\|MFS-transporter	gnl\|CDD\|341038	cd17485, MFS_MFSD3, Major facilitator superfamily domain containing 3 protein. Major facilitator superfamily domain containing 3 protein (MFSD3) is a predicted acetyl-CoA transporter. As an atypical putative membrane-bound solute carrier (SLC), MFSD3 is most likely to be functionally active in the plasma membrane and not in any intracellular organelles. MFSD3 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.77766e-63
NZ_CP012159.1\|WP_050433032.1\|7308212_7312394_-\|amino-acid-adenylation-domain-containing-protein	gnl\|CDD\|237108	PRK12467, PRK12467, peptide synthase; Provisional.	0
NZ_CP012159.1\|WP_169796659.1\|7331300_7332944_+\|protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	6.75829e-98
NZ_CP012159.1\|WP_050433031.1\|7306402_7308094_-\|cyclic-peptide-export-ABC-transporter	gnl\|CDD\|226968	COG4615, PvdE, ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism].	2.90849e-109
NZ_CP012159.1\|WP_156338879.1\|7332968_7333889_+\|hypothetical-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	4.36058e-07
NZ_CP012159.1\|WP_063796655.1\|7343844_7346013_+\|hypothetical-protein	gnl\|CDD\|197216	cd09117, PLDc_Bfil_DEXD_like, Catalytic domain of type II restriction endonucleases BfiI and NgoFVII, and uncharacterized proteins with a DEAD domain. Catalytic domain of type II restriction endonucleases BfiI and NgoFVII, uncharacterized type III restriction endonuclease Res subunit, and uncharacterized DNA/RNA helicase superfamily II members. Proteins in this family are found mainly in prokaryotes. They contain one copy of the conserved HKD motif (H-x-K-x(4)-D, where x represents any amino acid residue) in a single polypeptide chain, and have been classified as members of the phospholipase D (PLD, EC 3.1.4.4) superfamily. BfiI consists of two discrete domains with distinct functions: an N-terminal catalytic domain with non-specific nuclease activity and dimerization function that is more closely related to Nuc, an EDTA-resistant nuclease from the phospholipase D (PLD) superfamily; and a C-terminal domain that specifically recognizes its target sequences, 5'-ACTGGG-3'. BfiI forms a functionally active homodimer which has two DNA-binding surfaces located at the C-terminal domains but only one active site, located at the dimer interface between the two N-terminal catalytic domains that contain the two HKD motifs from both subunits. BfiI utilizes a single active site to cut both DNA strands, which represents a novel mechanism for the scission of double-stranded DNA. It uses a histidine residue from the HKD motif in one subunit as the nucleophile for the cleavage of the target phosphodiester bond in both of the anti-parallel DNA strands, while the symmetrically-related histidine residue from the HKD motif of the opposite subunit acts as the proton donor/acceptor during both strand-scission events.	4.10772e-05
NZ_CP012159.1\|WP_050433042.1\|7336475_7338626_+\|M48-family-metalloprotease	gnl\|CDD\|320700	cd07341, M56_BlaR1_MecR1_like, Peptidase M56-like including those in BlaR1 and MecR1, integral membrane metallopeptidase. This family contains peptidase M56, which includes zinc metalloprotease domain in MecR1 as well as BlaR1. MecR1 is a transmembrane beta-lactam sensor/signal transducer protein that regulates the expression of an altered penicillin-binding protein PBP2a, which resists inactivation by beta-lactam antibiotics, in methicillin-resistant Staphylococcus aureus (MRSA). BlaR1 regulates the inducible expression of a class A beta-lactamase that hydrolytically destroys certain ?-lactam antibiotics in MRSA. Both, MecR1 and BlaR1, are transmembrane proteins that consist of four transmembrane helices, a cytoplasmic zinc protease domain, and the soluble C-terminal extracellular sensor domain, and are highly similar in sequence and function. The signal for protein expression is transmitted by site-specific proteolytic cleavage of both the transducer, which auto-activates, and the repressor, which is inactivated, unblocking gene transcription. All members contain the zinc metalloprotease motif (HEXXH). Homologs of this peptidase domain are also found in a number of other bacterial genome sequences, most of which are as yet uncharacterized.	4.24014e-34
NZ_CP012159.1\|WP_156338878.1\|7316728_7321408_-\|SDR-family-NAD(P)-dependent-oxidoreductase	gnl\|CDD\|225858	COG3321, COG3321, Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism].	0
NZ_CP012159.1\|WP_050433037.1\|7329686_7330910_-\|hypothetical-protein	gnl\|CDD\|311960	pfam08291, Peptidase_M15_3, Peptidase M15.	0.000255801
NZ_CP012159.1\|WP_156338880.1\|7334507_7335920_+\|hypothetical-protein	gnl\|CDD\|271320	cd05819, NHL, NHL repeat unit of beta-propeller proteins. The NHL(NCL-1, HT2A and LIN-41)-repeat is found in multiple tandem copies, typically as 6 instances. It is about 40 residues long and resembles the WD repeat and other beta-propeller structures. The repeats have a catalytic activity in Peptidyl-glycine alpha-amidating monooxygenase; proteolysis has shown that the Peptidyl-alpha-hydroxyglycine alpha-amidating lyase (PAL) activity is localized to the repeats. Tripartite motif-containing protein 32 interacts with the activation domain of Tat. This interaction is mediated by the NHL repeats.	1.08238e-05
NZ_CP012159.1\|WP_050433033.1\|7312413_7313934_-\|tryptophan-7-halogenase	gnl\|CDD\|380163	NF033113, halo_ClmS, chloramphenicol-biosynthetic FADH2-dependent halogenase CmlS.	2.27454e-76
NZ_CP012159.1\|WP_050433036.1\|7321439_7329197_-\|non-ribosomal-peptide-synthetase	gnl\|CDD\|237108	PRK12467, PRK12467, peptide synthase; Provisional.	0
NZ_CP012159.1\|WP_050433044.1\|7340463_7342389_+\|right-handed-parallel-beta-helix-repeat-containing-protein	gnl\|CDD\|275079	TIGR04247, nitrous_oxide_maturation_protein_NosD, nitrous oxide reductase family maturation protein NosD. Members of this family include NosD, a repetitive periplasmic protein required for the maturation of the copper-containing enzyme nitrous-oxide reductase. NosD appears to be part of a complex with NosF (an ABC transporter family ATP-binding protein) and NosY (a six-helix transmembrane protein in the ABC-2 permease family). However, NosDFY-like complexes appear to occur also in species whose copper requiring enzymes are something other than nitrous-oxide reductase.	1.22892e-12
NZ_CP012159.1\|WP_050433035.1\|7315440_7316688_-\|cytochrome-P450	gnl\|CDD\|225035	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism].	1.9892e-63
NZ_CP012159.1\|WP_050433041.1\|7336023_7336479_+\|BlaI/MecI/CopY-family-transcriptional-regulator	gnl\|CDD\|367747	pfam03965, Penicillinase_R, Penicillinase repressor. The penicillinase repressor negatively regulates expression of the penicillinase gene. The N-terminal region of this protein is involved in operator recognition, while the C-terminal is responsible for dimerization of the protein.	1.70808e-38
NZ_CP012159.1\|WP_063796654.1\|7339870_7340341_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.29274e-15
NZ_CP012159.1\|WP_050436150.1\|7346033_7348952_+\|DEAD/DEAH-box-helicase-family-protein	gnl\|CDD\|350180	cd18793, SF2_C_SNF, C-terminal helicase domain of the SNF family helicases. The Sucrose Non-Fermenting (SNF) family includes chromatin-remodeling factors, such as CHD proteins and SMARCA proteins, recombination proteins Rad54, and many others. They are DEAD-like helicases belonging to superfamily (SF)2, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. Similar to SF1 helicases, SF2 helicases do not form toroidal structures like SF3-6 helicases. Their helicase core consists of two similar protein domains that resemble the fold of the recombination protein RecA. This model describes the C-terminal domain, also called HelicC.	1.66859e-11

>NZ_CP012159.1|WP_156338879.1|7332968_7333889_+|hypothetical-protein
MRGIRMLLLLVAMGPAWASPSLAQAGPRREAPQPAPQAGGWGKAAVMKEQARALTHKGDELYDDGKYEEAYYFYNEALQRYDAPPIAFSRALCLVKLGRLLEARAQFTKLTEDTLPPMSPREFIQAQAEASVELAKIRVRIPTLRVTVTDAPEVAVKVTVDGKDVPHLDGPIAVDPGEHMVIASAQGGEMVAKAIVVPEGKTTRLEISLLPSPLNPRRSMVPAIVALGVGTVGLVTGLVTGFLAAGEDEPGLTAASMLGLSLGGLGLGSGATLLLVRSVGHSGHTTTQSARRPPLDGAGLLLRGSF
>NZ_CP012159.1|WP_169796659.1|7331300_7332944_+|protein-kinase
MRQIGAGGMGAVWLADHVQLGSEVAIKFMATDAATSSAARARFEREARTSAKLSHPNIVHVQDYGITGDQQYLVMERLVGEDLGERLKREGKIPLGELSVLAIQIGRGLRRIHDAGLVHRDLKPSNIFLVTGEDGESLVKLLDLGIVKSVIVSTGEGTNTGESTRTGEIVGSPHYMSPEQVQGRKSLGIQSDLWSFGVVLFRAMTGQMPFKGEGIGSLIAAILTSPLPSPSSLAPELPADIDRFFQRALAREPEQRFQSARDLVDALLEMLGTRPSAVSMPFLVAPTPSSPRGPLSPGAPSSPPRGPLSPGAPSSPRGAVPPAPPRRPPVPSPSSPHSPVMPAAPGTPSAPGVPSAPALLVSPRPPSEPGQPVEGPAAAQPLTDTLVSLFNRTGAPVQPQRKAMLIGTSMGAAGLTVLGLVWMLSHRAPPDAAPGDAAPSPTVSEEARAQDPAPPPQASSIVAEVATASAAVTALATADPASAEPPDAEPTPTASPTAHEASRPDAKPPAATGTTERQTTQRTGTPATTSEPEGPLRPPRVKRRLGF
>NZ_CP012159.1|WP_050433037.1|7329686_7330910_-|hypothetical-protein
MGIRDLMNPTGIAQRPELTAPALGSAQLFDPNTSGTPGGFTEGTSLPGQNTQSFSRTMSDAGTAADGQLGTEQADGACSTCPFVLRLEHRSRYTAMPKYSDQEWVPRERFIFLVGQGRVLSVRVAEPEGAVATWEVTPVGAYSGTVDPSTGSGNRFDYTPVVTERQRTEHPRDPNQTTDTSTPILIGYRRPNSGIQYRIKATVTHNGHTQEVEETVVQDERDIIRQEYVDYRTWRDGFRLHVPYRNRIVEASDPALRGNYNLVLDSAMTALAQEVRANCAGAVRISSGWRNPRRNRAVNSTAANSNHQHGGAVDLQPSGTSNGTQGTVQHRAAYLELYNAALATPHNSVLLERNATPLYPRNEAVPVPSPADPDTNADGVPDRFDPAFGRANHVHIDRSPPNESEDD
>NZ_CP012159.1|WP_050433036.1|7321439_7329197_-|non-ribosomal-peptide-synthetase
MNAGQEVAQRLPLSHAQLRLWFLEQQHQDASAYEVFFGIRIEGDLDVAALRAALGACIERHEPLRTVFVERNGQVLQEVLPSFALDLGPVRADLGADPRAVLARWMAEERRAPLPLMGAPLLRAAIHRTSATEHVLSLRSHHLIFDGWSAPVLLRDLAQSYAASSAGEAAPGKPRMHYRDFVQEERAWLGSAAADDARAYWKERLSGTPVLELPADFPAPAARSTRGERVELSIPAEVVAGLHRLRETEACSLFVVLMSAWRALLHRTTGQADFALGTLMANRATDEAREPIGYFAETVALRGVIGGETTFRSLLREQRERVREALTHQRLPYDEVVKLASVASVAGVDPLIQAAFVFQTTQKGEIAAGGARFDVVKLCPDGSVPETAKFDLTMSLETLPAGVEGMISFSTDRFSRAHVERMASHFQHLLRSLAETNGAWDVPLTQVALLSPDERAEILREGNVAMASFPAATLTARFAAQVAARPEASAVTFEGESLTYRALDARAEQVARRLRSLGVGPEVLVGVCLARSLELCVALLAVLKAGGAYVPLDASYPAERLQYMVSDARVSVVLTQADLAGLLPADVPRVFVDAAAAPEGDGAEGHVPGGEGAPAAGVTPDSLAYVIYTSGSTGRPKGVQVTHGNVTRLFDATAAWFGFGPDDVWTLFHSYAFDFSVWEIWGAWLHGGRLLVVPHAESRSPEAFHALLRQEGVTVLNQTPSAFRGLIDADAAASGQGLALRTVIFGGEALDPTMLRPWFARHGDEKPQLVNMYGITETTVHVTYRPLTAADAEQARSVIGTPIPDLELHVLDAHQELSPIGVPGELYVGGAGVSRGYLDRPMLTEARFLPRASIRGLAGASGEVASDARGAGRLYRSGDLARRLPGGEIEYLGRIDDQIKIRGFRIELGEIEATLAGHPGVRAAAVLVQDGANGHRFLTAYVVPAGKAPSAAELRAHLLARLPEYMVPASFDFLETLPLGENGKLDRRALLGRAQVAPKAAARATFVPPQTPQEALLSEIWADVLGRGPVGIHDSFFDLGGDSILSLRVLSRARQGGLDFTLQQLFKHPTIHELLRVSGGAAQTAPRTEAFALLSPEDRARIPDGVEDAYPLAALQLGMFFHSSLNTAEGVYHDLFSYHLRTVFDEAAFGAALGDVVAAHPILRTGIALTGFSEPLQLVHRAAPAVFDVEDLSALPPEAQDQAISGWFEVEKGRGFEAEKPPLLRVRIHRRGAADFDLSVSFHHAIFDGWSNALFLAELLERYAARRDGLVLALPVEHAQRYRDFVALERRATQRAEDRQHWQQQLADMTLLSLPRWPSTARVKDASAGMASVSIPDAVCEGLRDLARAAGVPLKSALLAAHMRVLAGLANQDDSQTGLVTNGRVEDEGGERVLGLFLNTVPFRLPIRDVSWSTLARQAFEAECALLPFRRYPLSEIQKLSGGERVFETGFNFVHFHALTATAAIEGLELVGVKVFERHNYLLAVIFSLDPLTGKLTVNLVHDTAEIPPAQVAQIAAHYQRTLAAMASAPEASCLSFSPLSAKERAEILARFGRADRGAAVVAGERLAHELFEAQAARTPDATAVVAIGGQGSEAGTSEVLSYRELQARARKLARHLRALGVVPGARVGVFLPRSSDLVVAFLGILGAGGVYVPLDPTYPHDRLQFMLEDAAPRLVLTVEALAGSLPAYAGRVVRLDAEREALAALPQGGLERTVGAEDLAYVIYTSGSTGRPRGVLVPHRGLPNLAMAQSEAFGVTASSRVLQFASPNFDASISELLMALCSGAALYLVDRGGPPSATALLELLKEHAISHVTLPPSLLAVLPDAELPALVTLISAGEACPPALAARWGKGRRFFNAYGPTEATVCASLAEVTAEEATEAVLSIGRPMAGVEVYVLDRRLAPVPVGTPGELCIGGLGVAQGYLNQPALSVEKFVENPFGSGRLYRTGDRARFRSDGRIDFLGRLDEQVKLRGFRIEPEEIRAVLNEHPGVQDSVVVVREAAGAGKQLVAYVTRERNERRAVASVCELWPSTFEFPILDDLLYHAMIADERRMAQYKASIEKVVPGRVVVEVGTGPQAPLAILCAQAGARKVYAIELDAKAHRSAVEHVKRLGLDGVVEVICGDVRTVRLPEPADVCVSALFGSIGGAEGAAAILNGARHLLRPSGVMLPERTTTRIVAVSLPEALRAAPRFSETGRHYVQKIFDHVGHPFDLRLCVSKLPREGVLSGTAVFEDLDFSAEVPLTEEHEIVVRIEKEGRMDGFLLGSHVTFTSGVTLDVLEGEHSHLPVFLPVFDQPVEVEAGDVIRAVCARMLSRDGLHPDFLVRGKLVRKDGTEVMFSYGFPQFETNYKASAFHRRLFERHEENLGISREAATDTAKGTAETAFARASQNSVGGGAPEALSQELRVFLRQKLPDYMIPAAIVELPALPVTPAGKIDRRALPDPEARGEGRKAIAPQDALEREIASIWKEVLQIPEVGSDDNFFDLGGHSLLLMIVLNKLQESRSETLDIVELFEHPTVRALAQHLRKRQAVSGASGARRSPGAAVAGGAAAVAPLGPGASAEEIKRQRLAAREQRRQARRGTSE
>NZ_CP012159.1|WP_156338878.1|7316728_7321408_-|SDR-family-NAD(P)-dependent-oxidoreductase
MNDFFEGELPASGIAVLGMSCRVPGADDPAALWRNLCAGHEAITRFSREELLAAGHDPALIDHPDYVPVNRIIEDVASFDAGFFGFTPREAELLDPQQRLFLECAAEALEVAGYGAKAHRGRVGVFAGVSSSAYLLHHLLPNEELLRKHGAYHLFLHNEKDFLATRVAYKLDLRGPSVNVQTACSTSLVAVHMACQALLESECDVALAGGASIRVPQVSGYLYQKDMIFSPDGRACAFDAGARGTVAGSGVGVVVLKRLDAAIEDRDPIQAVILGSAINNDGASKVGFTAPSVEGQARVIREALAVAGVGVETISHVEAHGTATPLGDPIEVAALSRVFREGTQAKQVCTLGALKNNLGHMDAAAGVGGLIKAVLMLRHGQVPPSPRFQVPNPQIDLKNSPFRVNTRLEAWDTDGAPRRAGVSAFGIGGTNAHVVVEEAPVLPASASASESSHAFQLLTLSARSEDALGRVGQRLVEHLEGDEAQALADVAYTLHVGREPLGVRRAVVCQSHEEAVRALRGGAGAVASARRSVVFLFPGGGAQYPRMARGLHATYPVFREAFDRCAEIVRGLARIELGVVLLGEGEGDATHLRRPLMGFASLFTVEYALASLLRSWGITPQAMLGHSLGEYVAACLAGVFSLEDALQLVVRRGQLFETLPGGGAMLSVPLPESVVRPRLGGALSVAAINTPSTCTITGDGAALDALSAQLEAEGHTCRRLHVDVAAHSPSVEPILEPFRQIVRTIRLSTPEVPLLSNVTGTWMTDAQAMDPEYWVQHLRQPVRFAESLSTLFGDGAHVLLEVGPGHTLATFARQHPALGEQVVLTTVRHALGNQADEAVLLGAIGALWSCGGEVDWAAFHAGEVRRRVALPSYPFERQRFWIDAPAPGEVRAEGGPRPGAQTEVPQRNALADWFYVPGWKQSVPVAGGTAVVSEAVKALRFLLLVDDEPLLDALGAALQRQGHAVTVARSSLASGRASAGEMRFDPRRPEDYVDLLRRVGGGAASAGAPDVIVHGLSVGGAERGALGAAGAVEEALARGLHSLLFLTQALDRLGWVDQVRVTALSSGLYRITGGEVLRPERSTLLGWLQTVPFEFPALRCRAVEVEVSGHPAEGESLVRKLCAELAGDGSEPLVAYRGRQRWLPTQESIHLAEEGPAGASGVLREGGVYLVTGGLGGVGLSLATALAERARVKLVLLGRTALPARATWERALADETADAALLGKIQGVLAIEQLGSEVMTLAADVCSRSSMEAALAVAKAKFGVIHGVIHAAGVPGGGVMLRATPEGVARTLAPKVEGTLILAELLAEAPPDFLVLCSALVTVVGAFGSIDYTAANAFLDGFAHARADEGRTRVIAIDWYRWKQLGMARAVEALHEAVTGEALSGMTEREGRDAFLRILENRALRSADVPQVAVSSEDLVALLRARPAPGEATPAPKPGVSAQKARHGRPVLGVAYVSARSVTEQRLASLVQDLLGIETVGVDDNFFELGGDSLVGTRLLGRAREVFGMDLALRDLFEAPTVAGLAARFDTGVALQALQGGPGVTAEAGAEDDIEMGLL
>NZ_CP012159.1|WP_050433035.1|7315440_7316688_-|cytochrome-P450
MSEDAQSQFSFSALVRAYRDPHPAYAALRSHDCISYDPTSQFWLVTGHAATTAILSDQRFSSDVRFENAASPEPGASSFLRDAIEKGVIFSDGDAHRRVQNVILRVLGRMGKEAPANITAMVQAILSRVRGHASFDLVKDFAEPLSLLVVSQLLGLPMDDEEHLRKLAVWSDAHGDAVSGYLRVDLQHINRLGARFREILAAKREAPEGDLFSAFLQEGSLFVDDDELIINCMMIFGAGRVTTRKVLSNGLPVLLRDWARWGRLHREDATFCKRAAEELLRVVTPTRYLLRCATEDIDLSEQFPGDHLIYEGEKVMLFLEAANRDPEVFAQPDAFDPDRATTRHVSFGFGSHYCPGAKLARLEIQIALELLLETFPELHTDTTFVPLWDPNPNLGGIMSLRVCPFRASQAAKQEG
>NZ_CP012159.1|WP_156338877.1|7314041_7315328_+|MFS-transporter
MTTSSRRFRFALLFGLAMTEMMPIALISQALPLFLRRSGASLQAIGLISLVLLPRALKVFWAPFVDRIGASSRFGRYRLWLLCLHGLLVVSLALGAFTDVEAWLTTKLTFGIPALLWLSILSATADTASHALAVNLLAPDERGSGNGVQTAGMMLGSLVGGGALVMLVEQTSWKLALLLMAGAILLPLPAVLLYQEPPLASAQHVTAREIFAFFKRPRLGRWLLFLGLMAIGPSTIDICLPSLLVDRGYALSEIGLVMGVITSLAGAAGGAFGGVLIKHLGRERAFYALTLLCSACLASTLLTRMAPGRALLYAGLALPYFGVVARAPLLYAMIMDRSRGHVASSDYTVQFTLVQISGFLGLGLGGVIAEQLGMTAAFVTAPLLTLGTLVAAKYLVAPQDFQPDPETATSDADTALSRGSSALTPADS
>NZ_CP012159.1|WP_050433033.1|7312413_7313934_-|tryptophan-7-halogenase
MDEAFDVIVLGGGPAGSTVASFVAMAGHRVLLLEKERFPRHQIGESLLPATIHGICSLLGVKEEIERSGFPRKNGGTFRWGKSADPWTFRFTKQANDPYGHAYQVERAKFDDILLRNARRKGVDVREGHETLGMLYEGERVVGVRFRDAEGKERTASARYVADTSGHKSHVAPTVGQRVFSKFFQNVALYGYYEHGKRLPAPNSGNILCAAFPSGWFWYIPLSDTLTSVGAVVAKDAAGRIRESADEAMRSYIDECPIIRDYLSTATRVTEGIYGEYRIRKDYSYCNTRFWAPGVVLVGDAACFIDPVFSSGVHLATYSAMLAARSINTSLLDDELMTEEECFEEYEFRYRREFGKFYQFLIAFYDMNQDESSYFWSARKILNTEERDNDAFVRLVAGISEADEPLFEGGADRFFADRQGFGAYFADVVAGPGAEEKASAAPRPAAAHRPDPVKFDADKFMQGFTSEVAQLQLLALMGERRPKERPLVPNGLVASGDGLHWAVAPE
>NZ_CP012159.1|WP_050433032.1|7308212_7312394_-|amino-acid-adenylation-domain-containing-protein
MSTLREFLSDLDQRGVRLWEEGDQLRCKAPRGVLTPELAKALAERKPEILAFLRAAGGREGSSPGATVAMRRIMARDRMPLSFEQQRFWFLDRLGSGAAYNMPGRLKLEGPLDTGALERAIQEIVVRHESLRTTFQMTEGELHQVIHTGVRAPFSVVDLQALPASEQGEEASRRMREEAHRPFDLSRDVMLRVVLLRLAAEEHMLLFTVHHIVSDAWSMTILTRELSAIYTAFVAGEPSPLPPLPLQYGDFAAWQRGLDVGRALDFWKRALQKPLPLLELPFDAQPPTAQDHRGGQVTGRVAREVTDALRALAREEGCTPFMVTLAAFKLLLHRLTGQEDLILGTPSIGRNQPETEGMIGLFLNVLALRTDLSGNPTFRELLRRVRKGTLDAFAHQEAPFEKVVEAIQPDRRPGRDPVFEVMLNYVNTPAAAVASSQLRISAPVNTEPDALRALTLYVSEAEDALDLELVYQRALFGAGRMEALLDAFVGLFAQVVASPDQVLGAYSLVTEASRRLLPDLRTVLDVPSHAPITERLREWAERTPEHTAVEWAGRGYSYAELWRSVEGIARGLLAQGLRKGDVVAVHGSRSFGTVASLFGVLLCGGVLLPLADNLPRLRREAMLRVGEAKFVLEVVDADGEAGGERAPAEGRRVFEVDAQSGRLEVALAEAHSFPELREEDPAYIMFTSGTTGEPKGILGVHRGLAHFLAWQRTTFEIGPSERCANYAGLSFDLTLRDVFLAPTSGATLCLPPRGLELEGAGFLAWLARERITLAHPVPSLALAWLQHAPEGYTCPSLRWTLFLGEPLTDTLVTAWRKVFPATVVANFYGPSETTMAKCFYVVPEPPNHGIQPIGSPLPQTQAFVLRPDGKLCGIGEPGEIVLRTPFRTLGYVNPGPDDRRFVPNPEREDPRDLLYRTGDRARYRPDGTIDILGRVDNEVKINGVRVQPEEIKALLDRHPHVRGSVVVVSARQGEKRLVAYVVLHQGASLDTKELRHYLAQRLPAALVPSAFVSLDAIPVTPNGKVDVRVLPAPVSETVEGFSVPRNEIERRMVQLWQELLDRHAVGIHDNFFEIGGHSLVAVHLMARIHQVFGQHLPLSALFAHPTIETLASSLEVEGAQEQASPLVPIQPKGARAPFFCAPGLGGNVLYLHHLARALGPDQPFYGLQAVGMDGRATPHTTVEAMAAAYIQRVKQVQPEGPYHLGGHSFGGQVAFEMAQQLRRAGDDVGLLAIFDSGPPCATDEEKPTTDQAGALSEMAAILGFMAGREMRLDPEALRPLSAEERLVRFKQMMEAAKLLPANTDLQQVRGWLSVFESNYRMTYAPSDVRAVRTVYFCAREQAPEVREQRLAGWKRHTSMEVVDLDGSHQSILSEPRVRTLAERLTDLLQRRPG
>NZ_CP012159.1|WP_050433031.1|7306402_7308094_-|cyclic-peptide-export-ABC-transporter
MTILELLRKEAADGRRRILVSAGLAGGANALVLGFANLAAENPGDSAVRSFVMFVLAVAIYGYGARYTYNRLAEIVQNALLRIKIRIVDRVERAELEQLERIGVGEINDRITENMTIISDSSGLLANLLQSVCILLFATLYLVSLSAPAFVMMVFVLGTGMTVYMSMHREVREHLMRAAQKRLVFFETLMDLLGGFKEVKFSRRRGSDLRKEIVETGEALRDSTLKAAYMFNDHWIFANILLFALIGALVFVLPAHAEVDASTVKSLVAAGMFIWGPVGGVVGGFPAYVRCNVALGQIETLEAKLASAIQDTAPGQEPVDPWKGAIQAIQAEDIEYEYPTEKGNGNGGSFRIGPMSLSVSAGEVLFIVGGNGSGKSTFLKVLTGLYPPTRGRLSADGIPVRGKNVAVYREQISAIFSDFHLFAKLYGLLGTDEAEVQPLLVQMQLEDKTAFKADRFTRRNLSTGQKKRLAMIVALLEDRPIYVFDEWPADQDPEFRKYFYEELLPELQKKGKTVIAVSHDDRYFHCADRVVKLADGKILSIEAGAALKGRTKVGGDADEGASS
>NZ_CP012159.1|WP_156338880.1|7334507_7335920_+|hypothetical-protein
MRPFVHRCASTILRTLAITPLLLTLPGCMAAQEDEDDLSSDDPLGAAEQALAGDNLWNKRMGGPGDQIAVDIATDASGNVFFVGNFRDSFTVAGTTLTSAGGADVLVVKIDKGGTPLWARSFGGPGDQRATLVATDPEGNVLLQVVGDGPIGVDGGEVALGGVTLVKLAGSGAHLWSRGLDTIVTDLAVAPTGHVLLAGSFMGTLDLGAGTLTSSASGPDGFVARLDAAGNALWTRALGGEGDQQALAVAADSAGNVIVGGHHGTQFDFGGATITDTGSSNAFVAKFSPTGTPLWSQHPNPGPEQGAIHAVAADHLGNVVATGFDRQSGVSGRSLSVLKFAADGTPTFRRAFAGTPNTPGGNPGSFRGRHIAVDPSNNILVITGEMQVGLEATVDLGGGPLPPGILVARFDPSGNHGWSKSWELYGYASLAVRSNGSVFVGGSFTGPLNVGGWPMTNLGGYDLFVSHLSP
>NZ_CP012159.1|WP_050433041.1|7336023_7336479_+|BlaI/MecI/CopY-family-transcriptional-regulator
MPKTTQLGDLQLAIMQVLWELGEGTVTDVHQALLAERGLAPTTIATMLKKMADKGVVAHHADGRRFIYKPTVSREQVQRSMVAELTERLFGGDPAELVAHLISRNEIRPDELSALEQKIAAARAAETHRPEAKPTDPRTPDARPRKKEVKR
>NZ_CP012159.1|WP_050433042.1|7336475_7338626_+|M48-family-metalloprotease
MSTLLGWLFTYWIHSTILLSLAWALDRTLRAHPAWRELVWRVAILGGLVTATAQMSASLEPWGGTWDVAGPATETPHDMTTAALLDPPVFALLGPATDVPFATARTTPFGAAPQFVLLGEALPVPPEATTPRQAVTTMLSAWTWREFVLAAWLLGAALLCGGLWRSWRALARRIEDRRAVTDPAMQETLLVLAARPPRVHEPHLSVTGRVTVPMALGLIRPEICVPTRALVDLSQEAQEAMLAHELAHLVRRDPLWRLVVSLIQRVLFFQPLNVLAARRLADCAELLADDWAAQRTSEPLSLASCLTQVARWTTPQDQGLPVATINGGASGLGQRVDRLVRGEGLAQENRRPLWTLPLIGTVLAATALLAPSACGGRPPSGEPPATAHDARRDDHQIEADLAEARREIEEAVREAAEAEREVAEAMREAHGQTRKLQREVQREVQREVQREVRRDVRKVVREARRIAREATREALRNRDAHHQGDDHGDASDDHPHPGGQGRHDGAAFHVDLDERKLEAAMQLAFPSPEAMQHLHREIQIQVERELGRAENDLRQHFAHAEEALKEAQRASVSSRRHLALTERRTKSLDDAMKRHDEAQKQAQKALEETRKALENVETQRKIADKQRKIADKQRKIVDKQRKIIVKRGQLASPPSPPGPASPPSPASPPSPPSPPGPASPPSPPSPASSPSPPGPPSPASLPSPPSPPSPASPPSR
>NZ_CP012159.1|WP_156338881.1|7339640_7339841_+|hypothetical-protein
MDHGEGRATAGGAGAARRLSAATSLQRTGPVTHLSRSAAYASAMGERGTAHAVADAARHGKSTSER
>NZ_CP012159.1|WP_063796654.1|7339870_7340341_+|GNAT-family-N-acetyltransferase
MKPDEHPLQIAAISDQPHFLRAVADRVWNAWWREEGFSLGQIEERVRESMGQDALPATLVASSAGAFLGTVSIVKNDMAERPALSPWLAALWVDPQHRRRGVGAALVEAATSTAFTAGVDTLHLCTTPDNAPFYGKLGWQQVEANVAGLSILSRSR
>NZ_CP012159.1|WP_050433044.1|7340463_7342389_+|right-handed-parallel-beta-helix-repeat-containing-protein
MKPHASLLAFVLASGASVAWAQDATIAGAVTAPYPTFQNISLEWAVSGDANANGVVSVRYRAQGEANFREAMPLFRVPAGSNATFSWANRHAGSVFGLRPGTTYEIALTLTDPDGGDATETLSVTTRALPAAAPGAPEITVTPASIGAALAAASPGDVLVLGDGTYGPITVTRDGAEGQPLVLRAANPGGAIVTGDVRMDGRSHVHIEGLTVHGKVKFNDAEAIVVRGCTIETTEDGIVAFASGVKNAAILDNVITGATAWTEAALGESGANVGEGIALTGPGNVIAFNRVRGFRDCVSLLEGAEAVNQVSVDFYGNDLDVCADDAIEADFAMGNVRVYQNRITRSFMGVSSQPSLGGPTYFLRNVMYGVVYQAFKLQRSSVGDVGLHNTVIKSGDAFSVNTGDVFSRALFRNNLFLGGPGAVYAGYDSGPGRVMQLPSAAASCSFDFDGFGAIGAGSFSGRVGSTTFGSLAEMQARTTEVHGVEVDLEAFEATIAYPADPFALPATPSFALAASGGAVDVGAVLANVNDGFSGAAPDLGAVELGQEEAVYGPGGKLGSSGAGAGDGAGGDGGAGGGSGGGGAMGAGGPGGDGASSAGEEREGSEGGCGCRVPQGEEGGAGRWVLGMLAALGVARRRRGRG
>NZ_CP012159.1|WP_050433045.1|7342492_7343848_+|hypothetical-protein
MVLLEPLKQPEVSLYWTARLADDSDFSPEDPLALDYLAQQVGLWLFPTLTTRTSRAQYYAVVLYGLHLVERTIEKHALPADDNTRTQLFEQWERFWALALMESLGGALGRGNPDTIRGVRGLKRAWSPGDAPLRLDFPLISRQSELGALGAYLNSLRDIGLVIAGTLRPSPAARAILEAFWDEPDASARSSRYEAYALTALDPTLKKRVIDRKYTGLTLAAVGERSRLSCLVGRQRTVQQTRLYDTLFTRARDPITLPCSELIRRAAKDQVTDPEQVLANALAGTWGSVEATLREHLVLALTFGRAFREILTCFNAAYGAATDNGWMASRRLLVGAAFPPVAHDTLRKACSELLDSPLAARLKQLPVHGAAFLSLVAQLRDAPRDQALVHLLSYHLRVQQERGHGGSWLREDGDKVVVVRTSYTGHLANVGFPPLKIPIVRSLLIDMGRCS
>NZ_CP012159.1|WP_063796655.1|7343844_7346013_+|hypothetical-protein
MKLKPARPLERLARDEACHGAVFCTYSFDPSFFDEQVLPALLHLHSDPAEQALRFRDEAIQALQRTPVTCIVDGGCGPAGQRLPYDRLEVHGRVFHPKLVLLLFGKFARLQVGSGNLTPGGYGGNTELFFVRDLHYEAPEEATILHEVNEFLGQVATIVQSRGTQLDRIREDLTRRLGPKQQSSDRPAFVFLHSMRAPILDQFLDLVPREARVTRVGVMAPFFEADDADAMSIDELRSVLKSLTTARPGDPPRLDIGLLWDDAPNASTPPTPLSLTQGCNQLWRIHRGSDEEVTVDYLTLLAVTTAQVQIEDRHGESRRRPRQELEEALEEGKARPVQGLAAYAPRRILELIEEHGSHVHIWLHPASRLEEGVPVHRPLHAKLITLTVKHRRKELTYVLVGSPNASRRALLQTAADGGNVEIAAAFMLEGALALHDFAPELVHGRRETIKLTDRHFPPTMPNLAAWIESAIHDAAEQRLDVTWARRGPAPLGPFQLRYAKKTLLSGDRPPSGTTTVEGFTLQGSNCELVLTAHEQEFMVPIHVLDLAMLPTNPALVELELRELLALLGHRLGAERLATLKNTPGGVSMSVVLETIFGEGFGPVDVFKAWWGLERELADETLSVAAFRLLLVSPVSAGAVWDRMLKARDTPGGLTRDETWFYGAELLHVLTRTPIPEDASAPKKREILDEFTSKLRADLAELRPGNKGRPWVKDILKHYGVTT
>NZ_CP012159.1|WP_050436150.1|7346033_7348952_+|DEAD/DEAH-box-helicase-family-protein
MRGFLHLDARALADGIPPRDIERQEQTVLRALELFDERPGVVLADEVGMGKTFEAIGVAAAMRHMNGDSRIVVLTPGPDLNTKWEKEFQKFGEGRSPMYAFGDQIAAVRTLNDFVTTLRQKHVVIAPITIFNTGKGGKEQAYLLSLYCFWKKLHWNTTNAILRRYNGGKQPRVDVSKSHFLEFATLEEIEPHLDAAFGGRSEEEVIEGGPLVALDTLHQAEGDEVFGRHELVRRALNLARFRLVRALMPDVDLLILDEAHKLKNAHTVRSAAVTATFRKKYRKALFLTATPFQLDITELRQVLALFSMAIGAPADLLFGADAFFEDIRAYQHAYNAFEAFWRALDPGLVAEFGELFERDPTLTSEVDEPSLRAVAGAARELLRLKREKIEPGFRTWMIRSIQDDKRRYRSHRRAPCLPEGESVLPFLIYERFIAELFRQKARTHKAAVQINMVSSYGAAREGELLADSVRKDLPPSAEDYRKLLRSVLDKLGARPSDHPKLNFVMTDALEAAERGDKTLVFCTRVETLSDLASELKEAWMERLLERWRVAYPGATRDDIFDTTTRDKDTRGRHARIRTRFHDPQDALYLALRERYLQSLLTMGPWAEDHLDEIIELANERRSQLRTTKTRASRLDYGHLKRCVEQAAATLWRTHCPTEGADYEHQLDVLTSPDFLTLGLDLELDDLENDERGRECPTWEIGHDAARLVVQHRPHLWGYLSSALYGLNRKIRVGVVERLARLLTHREVPFLADLLGAARASGLEVENLKSRELLDFVDAFWRTPAGKPWVQRLRDFLHYFQSRNESQQRDILEGPIATGALVRHTRDGESRERLREAFNTPLYPMILVANEVMQEGLDLHRHCRRIVHHDLAWNPAQLEQRVGRVDRIGSLTTKLLARDPSTKLDILYPLVHRTIDERLFRTVKSREKWLEFLLGARPDFSEYTLGDEEPSPLPERLASELRIDLKPRAETPS
>NZ_CP012159.1|WP_050433047.1|7349006_7349480_-|hypothetical-protein
MFKDLNFKLSVISALMEDGHFVEEAEALHDAHAESAEDYKAIQEVMAFYEKLEIPPDLLATITSLVPDGGDLAYMHAVSVWDGEDDLFDITSLDGIEHLINLEVFAPIAMIGEGGIDYTPLLGCKKLKRVDVSFASEGEKNESVKEALEKRGVEIEE

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Crispr_ID: NZ_CP012159_32

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012159_32

7579746-7579982

Orphan

Consensus_repeat	Method
CTCTCGGTCTGGGTGGAGGGATTCGAACCCCCAATCCCCGGCTCCC	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP012159_32

>merge|NZ_CP012159|32|7579746-7579982|PILER-CR
CTCTCGGTCTGGGTGGAGGGATTCGAACCCCCAGTCCCCGGCTCCCGACGCCGGTGCTCTACCAGATTGAGCCACACCCAGATGTCACTGCATTCCTCTCGGTCTGGGTGGAGGGATTCGAACCCCCAATCTCCGGTTCCCCGAACCGGCGCTCTGACCAGGTTGAGCCACACCCAGATGTCACTGCATTCCTCTCGGTCTGGGTGGAGGGATTCGAACCCCCAATCCCCGGCGCCC

>NZ_CP012159|32|7|7579746-7579982|PILER-CR
CTCTCGGTCTGGGTGGAGGGATTCGAACCCCCAGTCCCCGGCTCCC	GACGCCGGTGCTCTACCAGATTGAGCCACACCCAGATGTCACTGCATTC
CTCTCGGTCTGGGTGGAGGGATTCGAACCCCCAATCTCCGGTTCCC	CGAACCGGCGCTCTGACCAGGTTGAGCCACACCCAGATGTCACTGCATTC
CTCTCGGTCTGGGTGGAGGGATTCGAACCCCCAATCCCCGGCGCCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012159.1\|WP_050433140.1\|7596678_7598811_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_169796669.1\|7553188_7554595_-\|cytochrome-P450	unknown	unknown	gnl\|CDD\|225035
NZ_CP012159.1\|WP_050433127.1\|7573196_7576103_-\|DUF504-domain-containing-protein	unknown	unknown	gnl\|CDD\|197314
NZ_CP012159.1\|WP_063796356.1\|7571196_7572162_-\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|378976
NZ_CP012159.1\|WP_050433139.1\|7594368_7595634_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050433124.1\|7560506_7569890_+\|hybrid-non-ribosomal-peptide-synthetase/type-I-polyketide-synthase	unknown	unknown	gnl\|CDD\|225858
NZ_CP012159.1\|WP_050433133.1\|7589013_7590120_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_156338893.1\|7570531_7571029_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050433130.1\|7583184_7584891_-\|TROVE-domain-containing-protein	unknown	unknown	gnl\|CDD\|368584
NZ_CP012159.1\|WP_156338894.1\|7591178_7591991_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050433128.1\|7576112_7577891_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|378183
NZ_CP012159.1\|WP_050433129.1\|7578579_7579104_-\|HNH-endonuclease	unknown	unknown	gnl\|CDD\|224321
NZ_CP012159.1\|WP_082362834.1\|7591987_7593682_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340887
NZ_CP012159.1\|WP_050433126.1\|7572196_7573144_+\|NmrA/HSCARG-family-protein	unknown	unknown	gnl\|CDD\|187561
NZ_CP012159.1\|WP_050433134.1\|7590205_7590571_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050433121.1\|7551796_7553173_+\|cytochrome-P450	unknown	unknown	gnl\|CDD\|225035
NZ_CP012159.1\|WP_050433123.1\|7554871_7560502_+\|type-I-polyketide-synthase	unknown	unknown	gnl\|CDD\|225858
NZ_CP012159.1\|WP_050433138.1\|7593745_7594372_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP012159.1\|WP_050433141.1\|7599069_7599456_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050433135.1\|7590770_7591109_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP012159.1\|WP_169796669.1\|7553188_7554595_-\|cytochrome-P450	gnl\|CDD\|225035	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism].	1.74718e-81
NZ_CP012159.1\|WP_050433127.1\|7573196_7576103_-\|DUF504-domain-containing-protein	gnl\|CDD\|197314	cd09080, TDP2, Phosphodiesterase domain of human TDP2, a 5'-tyrosyl DNA phosphodiesterase, and related domains. Human TDP2, also known as TTRAP (TRAF/TNFR-associated factors, and tumor necrosis factor receptor/TNFR-associated protein), is a 5'-tyrosyl DNA phosphodiesterase. It is required for the efficient repair of topoisomerase II-induced DNA double strand breaks. The topoisomerase is covalently linked by a phosphotyrosyl bond to the 5'-terminus of the break. TDP2 cleaves the DNA 5'-phosphodiester bond and restores 5'-phosphate termini, needed for subsequent DNA ligation, and hence repair of the break. TDP2 and 3'-tyrosyl DNA phosphodiesterase (TDP1) are complementary activities; together, they allow cells to remove trapped topoisomerase from both 3'- and 5'-DNA termini. TTRAP has been reported as being involved in apoptosis, embryonic development, and transcriptional regulation, and it may inhibit the activation of nuclear factor-kB. This family belongs to the large EEP (exonuclease/endonuclease/phosphatase) superfamily that contains functionally diverse enzymes that share a common catalytic mechanism of cleaving phosphodiester bonds.	4.16778e-51
NZ_CP012159.1\|WP_063796356.1\|7571196_7572162_-\|AraC-family-transcriptional-regulator	gnl\|CDD\|378976	pfam12852, Cupin_6, Cupin. This is a family of bacterial and eukaryotic proteins that belong to the Cupin superfamily. Some of the proteins in this family are annotated as being members of the AraC family of transcription factors, in which case this domain corresponds to the ligand binding domain.	1.12405e-37
NZ_CP012159.1\|WP_050433124.1\|7560506_7569890_+\|hybrid-non-ribosomal-peptide-synthetase/type-I-polyketide-synthase	gnl\|CDD\|225858	COG3321, COG3321, Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism].	0
NZ_CP012159.1\|WP_050433130.1\|7583184_7584891_-\|TROVE-domain-containing-protein	gnl\|CDD\|368584	pfam05731, TROVE, TROVE domain. This presumed domain is found in TEP1 and Ro60 proteins, that are RNA-binding components of Telomerase, Ro and Vault RNPs. This domain has been named TROVE, (after Telomerase, Ro and Vault). This domain is probably RNA-binding.	2.52053e-94
NZ_CP012159.1\|WP_050433128.1\|7576112_7577891_-\|AAA-family-ATPase	gnl\|CDD\|378183	pfam09414, RNA_ligase, RNA ligase. This is a family of RNA ligases. The enzyme repairs RNA strand breaks in nicked DNA:RNA and RNA:RNA but not in DNA:DNA duplexes.	4.6793e-19
NZ_CP012159.1\|WP_050433129.1\|7578579_7579104_-\|HNH-endonuclease	gnl\|CDD\|224321	COG1403, McrA, Restriction endonuclease [Defense mechanisms].	8.35596e-19
NZ_CP012159.1\|WP_082362834.1\|7591987_7593682_-\|MFS-transporter	gnl\|CDD\|340887	cd17329, MFS_MdtH_MDR_like, Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This family is composed of Escherichia coli MdtH and similar multidrug resistance (MDR) transporters from bacteria and archaea, many of which remain uncharacterized. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtH confers resistance to norfloxacin and enoxacin. MdtH-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	3.09122e-64
NZ_CP012159.1\|WP_050433126.1\|7572196_7573144_+\|NmrA/HSCARG-family-protein	gnl\|CDD\|187561	cd05251, NmrA_like_SDR_a, NmrA (a transcriptional regulator) and HSCARG (an NADPH sensor) like proteins, atypical (a) SDRs. NmrA and HSCARG like proteins. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	3.64362e-64
NZ_CP012159.1\|WP_050433121.1\|7551796_7553173_+\|cytochrome-P450	gnl\|CDD\|225035	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism].	5.19281e-76
NZ_CP012159.1\|WP_050433123.1\|7554871_7560502_+\|type-I-polyketide-synthase	gnl\|CDD\|225858	COG3321, COG3321, Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism].	0
NZ_CP012159.1\|WP_050433138.1\|7593745_7594372_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	4.40571e-52

>NZ_CP012159.1|WP_050433129.1|7578579_7579104_-|HNH-endonuclease
MTALTLMLTPWMVPHQIIPWQDAVTLSFLGKVEVLETYDDEIRSPSLTIRAPAVVRLKRTPGHIKRGVKFSRRNVFVRDDFRCQYCGTQKSAHELNYDHVIPRVQGGKTVWENIVTSCYPCNGKKRGRTPEQASMKLLRHPVKPKWLPQVPVVQLGQRRIPEVWSGYCGDVTAA
>NZ_CP012159.1|WP_050433128.1|7576112_7577891_-|AAA-family-ATPase
MRVRYPRTPHLPWSPGATSDDVRAADLSGLEGQEIVVTEKLDGENTTLYRDGLHARSLDSAHHPSRAWMKALHGRIASLIPAGFRVSGENLYARHSIAYEALESWFYAFSVWTGEDRCLDWDATVRFARRLGVPVPPVLWRGTMNVRALRALRLDLSRQEGYVVRTIRGFSRDHFPRSVAKWVRSGHVQTDEHWMLGPVIPNGRGPSAALWDVRSGAAPEAAALRGALRLPADAEELPGARTAERGEAAVVDAAVRLDVLGRRGDARLAGVLGALLHGWPRVTLMTHLPTALGMPLARRVGDLVGLHGRLHAPFPDERRRAGLRLMVRAADLGALHAVAAAALAGQRGADVDAAREQVAWSELHAAEADLLEETPLAALCEGLRSALGDLEADAQDRCWAEAADAWAEGRLHSPEEAAAYGFRWREGQFPRLVVTVGPSGSGKSSFVEQGLSGAAVVSLDALRAARGSRADQDANAEVLREGLERLEGLLAAGRSVVWDATALTAQQRSLPLSVARRRDALTTCAVFLVPRTVLTERNAHRTHRVRDVALAAQLERFAPPYPGDAHRTWYIDASGRVADSEGTLSGPEREEP
>NZ_CP012159.1|WP_050433127.1|7573196_7576103_-|DUF504-domain-containing-protein
MRTSEEIYNRIRWDARFEPARFVLGIDMHAAAPKRIPLPAFVPGGDIPWHRIVTIEADGEVIWDRLTGVDCLGETQAGLVRTPQRLRPPFFSPRSAMRWDPAQSGWVKAETPAPTFTPEATSRLRLLTWNTLWDRYDADRIHTAQRRPLLVEALHRADADVIALQEVELPLLEMLLAAGWVRAGYTLSDGPRGRDVDTAGLLLLSRLPVLEVGWHALGPHKAVVAMTVALAGQPLIVAATHLTSDHTHDGPLRRVTELAALSAGLGAVEGDRVLLGDLNDAGRGPAATLGMKDAWLEARGAEDETPTFDPTVNPLAAVSSRSGRALRLDRVLVRGATLRSVAAALEGAAPVSPAGLFLSDHYGVTVDLSVGEEAGEVLDTAPTARTALAWVPTESLWREIQAIRTAHDPQIDRWPPHVNLLFGFAPESSFEAAMPLLSAAAGEVEPFTAVLEGARSFRHSKDATVWLDPAAAGTAPWARLHQALVRRFPRCRGRAEGYTPHLTLGRVDEPARVQAEWTARLGRREAPVGELVLLSRRGDGPMQARAWVALGSGVVRWASEAVAPSATGTARPPAAARPDGSAALVAELEAALPGGVLHVTGSRRLGCALPGGDLDLVAVLPGPVDLDATEARVRAALPDASTLRRVEAIRVPGLELCVAGLDVDLTIVDAGTTPPEEAVARRLELGEAAAMALSAVTDADAVLQAVETTQELAGPTPHTGPARRREAFLILARTVKLWARAKGLDAAPFGGLPGIAWLVLSARTVREARDLEPGRLLASFFGNWAAWDWRSPIALAPSAPAVGAPGDPVRIATPTPPLRSCSDGVSTASLANLSEELYAAWEVVEAALTEGRDPLPDLCAPPLLHRRHAAWAVITVAVTRPEGLPAAVGRMRGRMRALLSAFERAGVTDLRAWPRAFDTAPRLCRHAIGLGQRPPATDAFKKVVGPWAAGLHEVHVEFVEGGAVPTLR
>NZ_CP012159.1|WP_050433126.1|7572196_7573144_+|NmrA/HSCARG-family-protein
MSKATTSDPILVTGGTGKQGGAVARALLAQGVPVRALVRDVEAKGAQALRELGATLVRGDLDDPASLRAACAGVRGVFSVQMPNLKDLGDDTERRQGKNLVEAAQAAGVPQFVHTSVSGAGEHHRQQPGWGSPESNVHYWESKAYTQDLVREGGFRSFTLLKPGFFMENFVRPSFLFANGVEDRLLTMLAPSTVLSLVAMQDIGAAAAAAFADPVGWNGVELELAGDRRSMREIAEVLSEVLGTHIEAPSLTAEEALAQGLWPPFVTSQQRMNEIDSPARPEFARALGLATTDFRTWAKAHMRGVDTVQESRSEA
>NZ_CP012159.1|WP_063796356.1|7571196_7572162_-|AraC-family-transcriptional-regulator
MPRRPNLISRTPEQLDLQDPRGDVLADVLSVSLLPNALYKCIEARSPWGLRVPTRDRAVFYLVVRGHALLEVDGEPPRTLSTGDVAFIPHGRAHIFRDEAARHLFLVHDGPVCVSTGSARIGGKGALTTFLAGFFPYTGGLRPILLEHAPHAVVLSASRDAPRPWSAATIDLMLAEIASPGPASTLVLQRLADVLFVQVLRWLSTHDGCGLVQALSDPPVHHALNLMHTRVDEPWTVAKLAARVGLSRSGFAQRFTQVVGDPPLQYLARWRMARAAELLRETHDSVAQIAQRVGYESVPSFSKAFKRWQGRSPSHHRVSRS
>NZ_CP012159.1|WP_156338893.1|7570531_7571029_+|hypothetical-protein
MALRLPLSIKLTRRVVARRDLFCEFVQKTTNPSQADAAFAFHAFAFKADEHEFARAFLSQRTEFWLFRANQRAFCGDFLAVDMSSPWLAGRRVYVIELKQGMSIRIGSGAVGVQLRNAATAVRALARDRGLVGEDAASVTVAGDGAEVCATFRDGVGIEGGRASR
>NZ_CP012159.1|WP_050433124.1|7560506_7569890_+|hybrid-non-ribosomal-peptide-synthetase/type-I-polyketide-synthase
MRIDELMAKLAALGVSLWVDDGKLRFRAPAGTLNPELKAQLGAHKEAILARLAATTEGQEHPLSHGQRALWFLHQSAPQSTAYNVVFAARVRSRLDAGSLRAAAQALSERHPNLRSVFVEEAGQLVQRAAPAGDIAFAEVDASSWTEEALQARLEELARRPFHLERGPLFQVHVFQRGEEHVLLLLVHHIAIDFWSTLVVLDELGMLYEAAGNRAALPPPSAPYAEVVRREDALVRGEEGARCLRYWQDALGEEPLPLDLPLDRPRPPSPSYRGDVHAFAIEPDLTQRLRAVARAQGVTLNTLLLTAFQILLGRSAGTPRVWVGSLTSGRGAADVAGTVGYCVNPVVMTADFSDDPPFSRALERAHESALGAYEHQGYPFPLLVEKLHRSREPGRSPFFQAMFVLQQPHRLPAALPFVLGVGGARMQLGGLDLESIPLRHGAARFDLDLMMVAEGEKLAGYLIHNVDLFDAETARRMMDHLQALLEDATQRPERRISELSLLGAAERNRLLEGFNAPRVIVENEGTFPALFEAQVARTPERVAASCCDETWTYAELDRRSSRIAHQLRALGAGPGARVGIFLERSLQMLAATIGVMKSGAAYVPLDPSFPDERLAFMRQDAELRALITEQTLAARPCVAAEGLPLLLLDKDDARIVEETPQREGMVVPALSDVAYVLYTSGSTGRPKGVQIQHHALTNFLGSMRKEPGIRHDDVLLAVTTLSFDIAGLELYLPLLAGARVDIARREDVSDGARLAARMAEVSATLLQATPSTFRMLLESGWQGQPALTALCGGEALPRDLADRLLARVGTLWNMYGPTETTIWSMVARVEQSGGPIVLGRPIAQTQVYVLDRHLQPVPVGVPGELYLGGAGLALGYLGRPALTAEKFVPDPFSLESGARLYRTGDRVRFLREDAIEFLGRVDHQVKLRGFRMELGEIEAALRQHPAVREAVVVARALQTDDTRLFAYVTVDPIALSTEEIKVEQIAQWQSVWGEIYQKGAAEAPPDPERDTSGWNSSYTGQPIPAPEMTAWVDGTAQDILRLKPRRVLEIGSGSGLVLFRIAPSCEQYLGTDFSAAALELLRQRVEKRGLPQVSLHQRSADDFTGVEPQSFDLVILNSVAQYFPSAQYLRTVLEGAVAAVRPGGAVFIGDVRSLPLLEAFHASIQIFKAPADLSRANLTQRVRKAVTQDEELVLDPAFFHDLRHALPRVSWVDITPRRGRQHNELTRFRYQAVLHVEAPAPTPLGAPTPWSESWTLEAVRRHLTQQTPAAWGLASVRNARLAEEEQALRWIEGGGPDAVSTFRAAAATQRPPALDPADLWQLAAELGYEVRFGWAQHGADGRYDAVFFRDGMERAASPSDPALLEAADPTRALTNSPLLARLTRRLGPELRSFLQERLPEYMVPSTVTPLEALPLTPNGKIDRRALPDPEGLRPELRVAYEAPRTDVEKLVAGVWRDVLQIEKVGLHDSFFDLGGHSLLLTQVRTRLKELLRRDVPITGLFRHPTIATLAHYLTEPSRTSTGPSARASTRRSRRVTNAGAPEGIAIIGMSGRFPGAPDLDIFWQNLRDGIESIAFFSPEELEAMGADPAIVRGPSYVRAASTIEGIDQFDAALFGYSPYEAALMDPQHRLFLECAWEALETAGYSPRTRAGARVGVYAGLAPNSYLPFAHLLGNFPPEALARFVAGSADFLATRVSYKLNLRGPSLTLQAACSTSLVATHLACQALRAGECDTALAGGVSIKVSQVPGYFYQEGGISSPDGHCRAFDARGRGTLFGNGVGVIVLKRLADAIEDGDMIRAVLKGTAVNNDGAAKVGFTAPSIDSQADVIATALELAGVDPETIDYVEAHGTGTPLGDPIEVAALRQVFGARARPCALGSVKSNIGHLDAAAGVASLIKTVLAVEHGQIPPSLHFETPNPELDLAQGPFRVNAALTDWPAGVAPRRAGVSAFGFGGTNAHVVLEEAPSAPPRPAGPERPLHLFTFSAHTPEVLDQLARRVSAHLGAAPPSALGDLCFTANAGRAHLDHRVAIVAGSHEELRERLGAFRRGEPTPGVHHGAVEHGSPPRLAFLFTGQGAQHVGMGLRLYETQPVFREAMDRCDALLRDHLDRPLLSVLYPSGHATARASRSDDDEPPQLIDETAYAQPALFAVGFALATLWRTFGIEPHVVMGHSVGELTAACVAGACSLEDGLRLVAERGRLMQSLPGDGDMAAVFAGEARVAEAIASMASRVSIAAVNGPGETVLSGERAAVRQVLERLAAEGIRARHLRVSHAFHSPRMDSILDPLEAAAAQLSLHAPQIELISNLTGQPLGALSATYVRHHARAPVRFWDGLQALDARGVDVLLEIGPQPTLIGIAERAQPAHAALRLPSLRKGQDDWQVLLNSLGALHARGADVDWDAFDRGYARRRVPLPTYPFERRRHWIDEPDRAAASAPPSIVERVDLPSVELSSTGPVTQRAVGALKLDWLHETVWREHHPSADPTSIRAPARWLLLADEGGVGEALATRLRARGSHVVIARRGAQCSEESPGLWTVAPDRPEDLVELLTRAFPAGSGGPGAVVYLWTLDAPALSGPDATPEAAEPLTCGSLLLLTQTLARHDLGPRLWLVTRGAQPVEAGAPVAAQQAPALGIGWTLALEHRTLWGGAIDLDPRAPDGEIEALCDALCAPGGEDRIALRSTPDRGLRRWFPRLVPRAFDSVPAWRPQRGSTYLVTGGLGGLGLRLARWLVERGARSLVLMGRSAPSPAASEILSTLRERGAHVEIAQGDVARAEDVTCTLSIIAHHASPLGGVFHAAGVLDDGMLVGQDPARFHRVLAPKVQGAWNLHVATRDLPLDSFVLFSSGASLLGSAGQSSYAAANAFLDALAHQRRAEDLPALSVHWGPWAEAGMAASLTQQDLERWADRGVGLIPPAEGLALLGELLGGAPPEVAVLPMDWNKASETFGRTGRLLSELTRAPASRRVAAPVKMRSWLDPLPLDERHDALLTHLQRRIADLLHLDGGTLPEANQGLFGMGLDSMMTLELRSRLELEASQPMPATLLFTYPTIDALTRYLLGELYSAPLVATSIPSPPPASPPPNTPVVATLFSTASSSPDDAQESALHDLSESELAQLLDDELASILGNPSGS
>NZ_CP012159.1|WP_050433123.1|7554871_7560502_+|type-I-polyketide-synthase
MADLSNREAAQGIDIRRVIIAWLSAKLGIAAERMNPRERFSRHGVTSAMAAELMTHLAGVLGQRLPATLLWDHPTVEALARHLEGAEQPRTAMRGQGLRMARSTAPDEPIAIVGLSCRTPGAEDPDALWALLARGGDALTAPPPDRWGAGEANGGGLPPRGGFLRQVEGFDPLSFGISPREAIAMDPQQRLMLELTWEALDDAGQPVDALRGTNAGVFFGAMWSEYGRFSCARSDLIGPHTATGMDSSIISARVSYTFGLAGPSLTVNSACSSSLVAVHLACQSLRRGECAVALAGGVNLMLLPESTMAMARFGGLSPNGRSRAFDAGADGYARGEGAGVVVLKPLSRALADGDPIYCVIRGSAVNNDGFSNGLTAPNPAAQEDVLRAACADAGVSPGSIHYVEAHGTGTALGDPIEAKALGAVLGEGRDELRPLLVGSIKTNIGHLEAAAGIAGLIKVALAMKNGMLPASLHFDEPNPEIPFDALKLRVQRETAPWPFADEAPRAGVSSFGFGGTNAHVILEGWRPAAQILPLSASDPAGLVSHSERLVEQLDGGAPWEGVCLAAARRISKGSSRLAIVAQSGGELAARLRQGAESPPHTKRRLVWVFSGNGGQWAGMGRSLLRTEPLFRAELARWDALFSPAIGGSIVDWLAAGEDDEHLERADVQQPLLFALQAALSALWQSWGIKPDAVLGHSVGEVAAAYVAGALDAASAARVVLNRSRLQQAAAGQGAMAVVDLAPEALEPLLTPTAGAVVVAAINAPSSVVLSGETRALADIIEALESRGVTAQRVRVPVAYHSPQMDPVQTALAQALSGLDPRRAAVPILSTVTGAPIPGESLDATYWARNVREPVRFADAVQRAAADGDAVFLEVGPHPILARSIEQCLSGLQGGPVLGSLRRGEDDRRALLESLAALYSLGAEVRWEAVFGASGKEASLSPTLALDPRDDQAPEGRAELVVLSAPSAEALRALAASTSAKLSGGDAPLLTDVAYTSSIRRAALEHRAAVVARSRAEAAEALDAVSAGETRAGAASGRSAPAGPPGLAFVFSGQGPQHPQMGCALAAQEPVVRAKLDECAALIQQHAGWSLWDELKASEDRSRLGRTDIAQPALFALQVAVAALWRSWGITPSAVVGHSVGEIAAACVSGAIDLDEAMRVVIARGQAMQRAAGSGRMAAVEMNAAALGERLEAFGGKLSIAAYNAPTDTVVAGDPAALASLIASLGDEGVFARDLGVDFAFHTAQMDPHSAALAETLGPVAVRAGTVPLVSSTLGEEIAGADLVADYWARNIREPVRFGAAVEALLAHGIRVFVEVGPHPVLTHALLQVASGAGSAEVRALPSLRRDRDARAVMLGSLGELWVRGYPAALGALFPDGGRTTRLPAMPWQRERCWIDAPRTERLHAAASVDLHTEPPRIEPSRVEPSRVEPLRVETTRATPSSSEAERDALVQYYASLSARSHRWEHLRFGPFRQIPPDYSWVMTWAEPEQHPEDFRRVLGAIEEVWRFLFRGIDFGPMTHALDVGCGYSSDLLRLATENPHLKVHGYNISPDQIEIGRARAAAAGVGDRMTLFHRDSSRDELPGHYDLIIAFQVIHHIQDKAAVLANIGRHLRIGGLAVMAEILSNMSTPIDHPASTAYFTPKEQWAEDLARSGLRVVECVDLSQEVALFLHDDDFESKYAYLAERYDEASLHHLRGPNQLAGLLSRGLAIYALLRVQKEAYLTVDELLRINHAHLGAPTPYARVAGEALVQAEAQTHVEAKAPQGGPDWNAVLSASPGERRSALEDGLRRWVAGLLEIAPTRLAMDQPLRKLGVDSLLALQMRHLLASRFAVDVRTRDLLGGLSLGDVATQIVCALETRAADEDRGEGQSWEEGEI
>NZ_CP012159.1|WP_169796669.1|7553188_7554595_-|cytochrome-P450
MLPSGPTLPGRVQLFWWMFDPTSFMERCTREHGDTFTTRFTSYPPSVYVTDPEVIKQVFVASAEDLSAGQANTGLMGFLFGERSVLSLDGAQHLRSRRLVLPPFHNERLGRYGRLMREITDQHIDRWPIGKSFSVSKAMHELTFDVILRLLFGVHERAFYEPFSKLVAELVRQTTSPLFHGLFAMLPPEWVMSMLTRGPTKVALGPLGERDLSLFMPGGAILQAKREIGALIHAEISLRRASSQRGDDVLSMLLDARDENGEGMSDDELHDQLITLFIAGHDTTANALSWAVHHLLQHREVRGKLDDELSGVKGEGAGWLQEVAELAYLDAFIKETMRLTPVAPVILRILQRPLRFGQYDLPAGSYVCPCVYLTHRRADLWPEPERFLPERFIGRRVSPYEFFPFGGGARRCLGAGFSMYEMKVILARLVARAALRPVGGGEVRPERRGIFLAPSSGVPVVLEGRREA
>NZ_CP012159.1|WP_050433121.1|7551796_7553173_+|cytochrome-P450
MKSSLPPGPRLPGFIQTSLYMSRPLHFLKRWSQQHGDTFTVHMTGSGDFVFITSPEDIRRVFTASIDVIYAGESNSLVRPFVGDSSVVVLDGEAHIRSRRQLLPPFQNERMQTYATIMRDVADASLDRWPVGRPFPLLSKMTEIAMELMLRNIFGLEDPREIATFLERFTSVLDEATSPMRVMASFAGLDLYKLLPFLHVSKLKRQLDDSIYELIARRRAAPRDPTRQDVLTLILESKHEDGQAMTDRELRDALVTLIAAGYETSAIGMTFAVERLLAEPWALAKVHEELDRVLGQETIVAEHLPALEYLDAAIKESLRLRPLVPLISRRTKAPFELSRHTLPAETMLIPALVLTHLREDLYPDPERFDPARFLGTKPDPYAWLPFGGGARRCLGMAFAMYEMRMVLATVLRRASLELASNRPVRMVNRHIMLAPSDGAPVVLKARRPKPQTKNSAAA
>NZ_CP012159.1|WP_050433130.1|7583184_7584891_-|TROVE-domain-containing-protein
MANYLQHFASLFTRQREKALPEQVQNSAGGFVFALDDWSRLDRWLILGADGGTYYASEQALTVDNARAVQACLASDGARTVKRLVEISTSGRAPKNEPALFALAMAAGDAQLETRKAALQALPLVCRTGTDLFHFARAVEGFRRWGRGLRNAVAGWYLDKPAEALAYQAIKYQQRDGWSHRDLLRLSHPVARTPEQAALFRWITQGLDGMAKETAKGGALSPASLPELVRGFEALRASTNRKQVLALIRQHRFTHEMLLTEWKNDPEVWAALLEHMPQTALVRNLGKMTAVGLLVPGSDAARKVAQQLVDKDRLRKARVHPVALLSALKVYEQGHGERAQKRANALSWTPAREIVDALNEAFYLAFQAMEPTGKKHLLALDVSGSMTCGTIAGVPGLTPRVASAAMAMATARLEPAFTAVGFASGQGLSAPFSSKGVEGLRPLGISPKQRLDDVLKAVDGLPFGGTDCALPMIWAQKNKIEVDTFVVYTDNETWAGNVHPFQALRDYRQAMGRPARLIVVGMTATRFTIADPSDPGMLDVVGFDAAAPRVMADFSRADTSAPAGPATN
>NZ_CP012159.1|WP_050433133.1|7589013_7590120_+|hypothetical-protein
MQPSTHAQASLDAPVSPALPSLTTFTPSSADPSSAAALLSGFSPHVPGPRFHLVLPFTVLGVAGGWMAADFFRVGALEHMDAGLRPSLVAIAALASSLLGLLLQPVTRWPGWRATVVATASVLLAGMLAGGFVGVMTWSRYGLGEGAASGFWCGVAFLPGFAAILMAARRLDRARPGSLVHGADRRAVWLAVSAAVAMGTLAALPDWTFIPGMGRPELGVSRWLGVTSVVVIGVLLLSNGVGVIRAHRAAGKLRDMRTCAPNDPSLSWARRQLDLGLGHEAAASVMPSAGIYREHDRIMEVVRGDPARAGQALLGSLGLSAAALACGVACLVATASHSAFAAAAPKRSLSEIPLSGGDVSAAPRSSPR
>NZ_CP012159.1|WP_050433134.1|7590205_7590571_+|hypothetical-protein
MLDSLSDAQKARGGGLLLTGIGVWFLKMGLFDVLREAEMGTASIRTSGKALFVAPAFLLFGLLLVVTGAPGDGTTGIGRHFVRPADRKLTSFGWLLTAVAFAPGLGLYIWLKQRLQELGYE
>NZ_CP012159.1|WP_050433135.1|7590770_7591109_+|hypothetical-protein
MRPRDSRYEQVDPQHRIEYRDPEDFDRIAFAMRALDRLRPKRLTVAVYKAVASIRIEQWSDLRREGASCAIVGIPPQASREHIAYALAELAGVASVPYTVQMLLAEERRPRA
>NZ_CP012159.1|WP_156338894.1|7591178_7591991_-|hypothetical-protein
MMLRRLADDVRLLRHKETLTTQYGDKPPWPLEVQTVKLPAGREALLILGPPEAREPLVLVLEADGGRAWTKEMPLVGVFPGVHEMAILSAAEGGVALAFCDPEGKLAALRHWDADGGIVADYEVVDAGGCAALSAAHWPGHGMVLAVAGEEGARTQIIDRQGGRAWGRAGVFLPWQSMTGAPVSIAPDGDGLVLLQVGALHGTSSSVLLAMRYDGRGSAAWGAPHRVGPAPAQKAARVVATSAGGGVVRVQTGGRSVVISADGNVSPLAR
>NZ_CP012159.1|WP_082362834.1|7591987_7593682_-|MFS-transporter
MNPWREMRGMPRDLWILAAAILVNRIGSMAVPFLSLYLIRHLGHDTAVAGLMLGSYGAGALLGATAAGRLCDRIGPGSILIGSMLASGGLLLAYPLLRTITALAVVTFALAATAEAFRPASLVVVTALAPRDRRKPAYAFARLAANLGMSIGPIVGGVLSELWFPSLFLVEGATSLLTALLVFVSPLRHRSRGVQMDDVPPSLAGGPASRDPILLALLVGVLLTGMIFFQFDSTLPLYLVRHLEMPGYSFGALITVNTLLIVFLELPLNSATAHWRHVWALGLGATLLGGGFGALALADGPFTLALSVAVWTFGEMILTPAATAAIAERAPVGRMGEYMGLHSTTTGLSFMLGPSAGLLVLNHFGPQVLWPCALAVGVMAALIFGTATAKIPRQTSLQADTVALEAGPVEQMPPEVVPSEDAAARGGAETGLVVSPEAAGSSRLGPSTDVASLRQARQPAPCPSSEPAYDPPPCLDQNGTVRGGQRGSLSSPPSVDAAGRERSPRMQPPRGTRRPTPRAMMASVSRGTSPLQGRSLLAARRRSSGPNLPRRMTRRRLRRRKRGG
>NZ_CP012159.1|WP_050433138.1|7593745_7594372_-|ATP-binding-cassette-domain-containing-protein
MSLRIEGLHKRFGGREVLRGVELGIEPGERVALVGTNGVGKSTLLSVVAGLIEPEAGTVVLHGTSLLGRDAPARAGLGYLPEAAAAPPHLSVRELLALVAALKRAPSLEGAVLDRVGARSTLDLRMGSLSLGQRRRACLAAALVGDPTLLVLDEPTNGLDPAGLTMLIALLRERAAQGAMVLVATHDFSFADAIGARHVRLEEGRVQG
>NZ_CP012159.1|WP_050433139.1|7594368_7595634_-|hypothetical-protein
MSAHLLLFRVLTTTAARAAAPSAVPLYLGLLLVLPVLFGPNGLRAETVTRAAQASPALALGLLSMWLLLTAHVARAVVELPEALLLRALPVHRGVFLGITGLHLAVIHAPWGVLWGRGEGGLAGMGALAVAVGLHGLLLARSSRLTELAAAVVLVVVAALPGEASAPLAALVAPLGVMAAWRRAPERTSSARGGGLPHWAPAALAVALLRVARRAEPGVLLRGMVLALLGGLVTPFAIRGHDVEVPAERCALSLQIAGVTLAVGGAGIGAAVLRAEQAQAWLLDALGVSGGLRTRGAAGASGVGGALLGWAHGGLTAFGLGASPTLVVRLVVESTLWGASLGVMAVWHAREALVAGPRRDRVGSIRVLLLSGLTVSLAGWLGEVAIVPIAGLSIALAALSARKAAVLPPPRCARNSGGTAR
>NZ_CP012159.1|WP_050433140.1|7596678_7598811_-|hypothetical-protein
MQPPFAVPLSLPDLAAFSGAELIFSSSYGGSDGATGTSVVVDVQTWPPQVVTHALTGRVFHAARSRRGRWLVHGYRDRDPRFDPDLESPGDSAPPRHTYFLRIYESGADTLPSLECPEPVPPPNWDEALRPLDEVTRSSERAHAYNVDDVAYVGEMPVLLPRFSGIDERHHPYVLRDGAWVEERSVPPYRRPDESGSERCSMRVIQLGDGCDVLLWDGHGLEWDGRRFVTTFEPRMRAPWWQRFTPVPVDQDGFFFLDERSALVEARRGKADLVQHLAGMSIQTMGPGPQGTLLLELTSGGIMLYDPADDALVKVPARCLPPRKGTSFLRWSDAGILVVARELRGSLVLFGVPGEELTALPRKRVSAKARRQTIHVRPACAALSGTRSASRARVSAELTEGISLIADDCAVLAHAQDAPRWRWSGDAEVVALGTGDGRVAVLDGRGTLCELDGQTGKLVPGRESLVTVGPSARSLAASSSGLWAVLEEGGVWLVGLQEPTRLPFEAPLAAAFDGVGRRLLVTGQRGRAALVFPATGVMEALPPLPEEVHAVAWLDGDRWLALGQRGVLDFDAATHAWRLLHPCQAGDGLVRSPDGTCVAMVSSKGSEVFQVEPWKSLSSVTYPDTFQPPPGGTVGTRLRVHGAAFLDEAQLVVGLTGGNGNLVRIGTSAAQCLDRFPGMPCERWLFVCAGSILIANAVPGAWTGDDGQAE
>NZ_CP012159.1|WP_050433141.1|7599069_7599456_+|hypothetical-protein
MGIQPERIATSQDRSIQPYLDRLCRHLRQTHHAAVFRYTESELRALAEAGIARARRHGLTFQPAITFFVTLQFVIAPDFDEHPRIRQILMDERLPPDERIDVLAVSVPEATWREAARARGARGEAAIQ

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Crispr_ID: NZ_CP012159_33

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012159_33

7648697-7648889

Orphan

Consensus_repeat	Method
GACCGCCGACGCACCCAGTTTCGC	CRISPRCasFinder

4 spacers

The CRISPR arrays of NZ_CP012159_33

>merge|NZ_CP012159|33|7648697-7648889|CRISPRCasFinder
AACCGCCGACGCACCCACTTTCGCTCTGAAACTGTGCGTGTCGGCGACCACCGACGCACCCAGTTTCGCGGCGAGAGCCCCTCGGTCGACCGCCGACGCACCCAGTTTCGCAGCGCTCACCGGGTGCGGGCCGCCGACGCACCCAGTTTCGCAGCGCTCACCGGGTGCGGGCCGCCGACGCACCCAGTTTCGC

>NZ_CP012159|33|28|7648697-7648889|CRISPRCasFinder
AACCGCCGACGCACCCACTTTCGC	TCTGAAACTGTGCGTGTCGGC
GACCACCGACGCACCCAGTTTCGC	GGCGAGAGCCCCTCGGTC
GACCGCCGACGCACCCAGTTTCGC	AGCGCTCACCGGGTGCG
GGCCGCCGACGCACCCAGTTTCGC	AGCGCTCACCGGGTGCG
GGCCGCCGACGCACCCAGTTTCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012159.1\|WP_050433180.1\|7661171_7663931_+\|beta-propeller-fold-lactonase-family-protein	unknown	unknown	gnl\|CDD\|225926
NZ_CP012159.1\|WP_050436158.1\|7657056_7658883_+\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|238657
NZ_CP012159.1\|WP_050433174.1\|7638164_7639145_-\|thioester-reductase	unknown	unknown	gnl\|CDD\|225856
NZ_CP012159.1\|WP_082362842.1\|7652947_7656733_+\|ATP-dependent-RNA-helicase-HrpA	unknown	unknown	gnl\|CDD\|273900
NZ_CP012159.1\|WP_050433182.1\|7665124_7665304_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050433173.1\|7635948_7637673_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|223786
NZ_CP012159.1\|WP_050433179.1\|7659571_7660867_+\|PAS-domain-containing-protein	unknown	unknown	gnl\|CDD\|132912
NZ_CP012159.1\|WP_169796674.1\|7631932_7633084_-\|SGNH/GDSL-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|238869
NZ_CP012159.1\|WP_050433181.1\|7663983_7664955_-\|quinone-oxidoreductase	unknown	unknown	gnl\|CDD\|176189
NZ_CP012159.1\|WP_050433171.1\|7633126_7634596_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|129794
NZ_CP012159.1\|WP_169796677.1\|7665398_7666307_-\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|235628
NZ_CP012159.1\|WP_050433168.1\|7629626_7631177_-\|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|224154
NZ_CP012159.1\|WP_063796357.1\|7642517_7646966_-\|type-I-polyketide-synthase	unknown	unknown	gnl\|CDD\|238429
NZ_CP012159.1\|WP_050433178.1\|7650635_7652774_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238084
NZ_CP012159.1\|WP_050433169.1\|7631461_7631905_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050433184.1\|7666432_7667800_-\|zinc-ribbon-domain-containing-protein	unknown	unknown	gnl\|CDD\|372687
NZ_CP012159.1\|WP_082362841.1\|7649162_7650521_-\|sorbosone-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|225044
NZ_CP012159.1\|WP_169796675.1\|7639161_7642521_-\|amino-acid-adenylation-domain-containing-protein	unknown	unknown	gnl\|CDD\|237108
NZ_CP012159.1\|WP_050433172.1\|7634698_7635952_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_169796676.1\|7647426_7648464_+\|VCBS-repeat-containing-protein	unknown	unknown	gnl\|CDD\|379232

Protein	Function_ID	Function_description	E-value
NZ_CP012159.1\|WP_050433180.1\|7661171_7663931_+\|beta-propeller-fold-lactonase-family-protein	gnl\|CDD\|225926	COG3391, COG3391, Uncharacterized conserved protein [Function unknown].	9.55061e-08
NZ_CP012159.1\|WP_050436158.1\|7657056_7658883_+\|TonB-dependent-receptor	gnl\|CDD\|238657	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.	3.16103e-13
NZ_CP012159.1\|WP_050433174.1\|7638164_7639145_-\|thioester-reductase	gnl\|CDD\|225856	COG3319, COG3319, Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism].	2.85044e-19
NZ_CP012159.1\|WP_082362842.1\|7652947_7656733_+\|ATP-dependent-RNA-helicase-HrpA	gnl\|CDD\|273900	TIGR01967, ATP-dependent_RNA_helicase_HrpA, RNA helicase HrpA. This model represents HrpA, one of two related but uncharacterized DEAH-box ATP-dependent helicases in many Proteobacteria and a few high-GC Gram-positive bacteria. HrpA is about 1300 amino acids long, while its paralog HrpB, also uncharacterized, is about 800 amino acids long. Related characterized eukarotic proteins are RNA helicases associated with pre-mRNA processing. The HrpA/B homolog from Borrelia is 500 amino acids shorter but appears to be derived from HrpA rather than HrpB. [Unknown function, Enzymes of unknown specificity].	0
NZ_CP012159.1\|WP_169796677.1\|7665398_7666307_-\|alpha/beta-fold-hydrolase	gnl\|CDD\|235628	PRK05855, PRK05855, SDR family oxidoreductase.	8.86422e-24
NZ_CP012159.1\|WP_050433173.1\|7635948_7637673_-\|AAA-family-ATPase	gnl\|CDD\|223786	COG0714, COG0714, MoxR-like ATPases [General function prediction only].	4.53859e-15
NZ_CP012159.1\|WP_050433179.1\|7659571_7660867_+\|PAS-domain-containing-protein	gnl\|CDD\|132912	cd07041, STAS_RsbR_RsbS_like, Sulphate Transporter and Anti-Sigma factor antagonist domain of the "stressosome" complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation. The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain of proteins related to RsbS and RsbR which are part of the "stressosome" complex that plays an important role in the regulation of the bacterial stress activated alternative sigma factor sigma-B. During stress conditions RsbS and RsbR are phosphorylated which leads to the release of RsbT, an activator of of the RsbU phosphatase, which in turn activates RsbV which leads to the release and activation of sigma factor B. RsbS is a single domain protein (STAS domain), while RsbR-like proteins have a well-conserved C-terminal STATS domain and a variable N-terminal domain. The STAS domain is also found in the C- terminal region of sulphate transporters and anti-anti-sigma factors.	5.78753e-43
NZ_CP012159.1\|WP_169796674.1\|7631932_7633084_-\|SGNH/GDSL-hydrolase-family-protein	gnl\|CDD\|238869	cd01831, Endoglucanase_E_like, Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.	3.67249e-48
NZ_CP012159.1\|WP_050433181.1\|7663983_7664955_-\|quinone-oxidoreductase	gnl\|CDD\|176189	cd05286, QOR2, Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone and 1,4-naphthoquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction.	1.23761e-178
NZ_CP012159.1\|WP_050433171.1\|7633126_7634596_-\|MFS-transporter	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	2.79679e-62
NZ_CP012159.1\|WP_050433168.1\|7629626_7631177_-\|NAD(P)/FAD-dependent-oxidoreductase	gnl\|CDD\|224154	COG1233, COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism].	7.75279e-75
NZ_CP012159.1\|WP_063796357.1\|7642517_7646966_-\|type-I-polyketide-synthase	gnl\|CDD\|238429	cd00833, PKS, polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.	0
NZ_CP012159.1\|WP_050433178.1\|7650635_7652774_+\|hypothetical-protein	gnl\|CDD\|238084	cd00146, PKD, polycystic kidney disease I (PKD) domain; similar to other cell-surface modules, with an IG-like fold; domain probably functions as a ligand binding site in protein-protein or protein-carbohydrate interactions; a single instance of the repeat is presented here. The domain is also found in microbial collagenases and chitinases.	0.00127648
NZ_CP012159.1\|WP_050433184.1\|7666432_7667800_-\|zinc-ribbon-domain-containing-protein	gnl\|CDD\|372687	pfam13717, zinc_ribbon_4, zinc-ribbon domain. This family consists of a single zinc ribbon domain, ie half of a pair as in family DZR, pfam12773.	4.09781e-12
NZ_CP012159.1\|WP_082362841.1\|7649162_7650521_-\|sorbosone-dehydrogenase-family-protein	gnl\|CDD\|225044	COG2133, COG2133, Glucose/sorbosone dehydrogenases [Carbohydrate transport and metabolism].	1.22468e-74
NZ_CP012159.1\|WP_169796675.1\|7639161_7642521_-\|amino-acid-adenylation-domain-containing-protein	gnl\|CDD\|237108	PRK12467, PRK12467, peptide synthase; Provisional.	0
NZ_CP012159.1\|WP_169796676.1\|7647426_7648464_+\|VCBS-repeat-containing-protein	gnl\|CDD\|379232	pfam13517, VCBS, Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella. This domain of about 100 residues is found in multiple (up to 35) copies in long proteins from several species of Vibrio, Colwellia, Bradyrhizobium, and Shewanella (hence the name VCBS) and in smaller copy numbers in proteins from several other bacteria. The large protein size and repeat copy numbers, species distribution, and suggested activities of several member proteins suggests a role for this domain in adhesion (TIGR).	4.55244e-09

>NZ_CP012159.1|WP_169796676.1|7647426_7648464_+|VCBS-repeat-containing-protein
MFSRVDTKLPASNVQSMAVGDLDGDGHMDLVVAHGPVSGDRDPRPTVSALLSQGNGTFVTRFTPFGDRTARRVLLEDLDGDGRVDLVVLGRDADGLGPVQVYLGQGNGTFDGRVDVALVSPGGIAVGDLDGDGKPDLIMSDADGNRLLLAFGQGDGTFERQAAHEGLRGREIALGDVDGDGQLDVLVLGAEVHVLLNRGGVLREATPVAVSPSASAMKLADLNDDGVLDLVVVEPDENALTVFPGLGQGRFGSAQRLSVGAGPRDVAMADVDGDGHLDLISADREADEISVLLGRGDCTFEDRRAFAVGAQPAHVVAADVTGDEKMDIVTANASGSVTVLINALQ
>NZ_CP012159.1|WP_063796357.1|7642517_7646966_-|type-I-polyketide-synthase
MLESSRLPESIEKWLVRRLSELRGLDVSAIDVRVPFSRYGLESIGAAKLVDDLSAALGRRLSPTLTWEHPSIEALARHLSGASTAPAPRVAQALRPQAEEPIAIVGMACRVPGAAEPEAFWGLLSGGVDAVSRAPSERWPPEARHAPVGTTAVDPRQGGFLDHVDGFEPLFFGISPREAAEMDPQQRLVLELSWEALEDAGIPARRLQGSMTGVFVGVAWADYATLQYRSGRVFDQHTVPGFHHSIVANRVSYVFGLEGPSMAVDTACSSSLVAVHLACESLRRGESTLAIAGGVNLNLVEDSAIGVGKLGALSPDGRCFSFDARANGYVRGEGAGVVVLKPLSRALADGDAIHALILGGAVNSDGASNGLTAPNPRAQENVLRLACARAGVAPVEIDYVEAHGTGTPLGDTIEASALGAVLGRGRSPERPLLLGSVKTNIGHLEAAAGIVSLIKVALGLRQRLIPPSLNYAEPNPLVPFEALRLQVVQQLTPWPLRERPARAGVSAFGFGGTNCHLVLEAWAPGGDEEAPSSPEVMSTAAGQALPVVEGAPRQAPPVVFVFSGQGSQWPGMGRALLRDEPVFRTTFAACDRVVQQLMGFSLIDQLLADERSSRLEEAEVACPAIVAFQIALAALWRAWGVEPVAVVGHSSGEIAAAQVASALDLEDAMRVTCMHGRLLARIRGQGALGVVALSWDEAGEAIRAHRGLLSRAIHASPGEVVLAGDPGALDEVFAALEQRRIFCRRIQMDSAPHSPQIDPLRGELLDALRAVHPHPAAIPMFSSVTGAKIEGERLDALHWTKNLGEPVRFAEAIQAMDPSGAVFLEISPHPLVGRAIAANLEASGRTCAVLRSLRRGEVDERAALRSSLEQLMALSQPVSRRAAAQIPGGAGPRFHPGGWHALPEDAEAFDEDDPRILPLSAKSREALVALARAHRRALEGDEASDGALPSLGDVVYTAGVRREHHAHRLAAVGACRDDLRASLDTFLRNEPTASTGRGRALEGPLPVVLVFPGQGSQWLGMGRELLRHEPSFRAAIEVCDRAIHREAGWSLLDELWADAPRSGLDRINIVQPALFALQVALAALWRAWGILPDAVIGHSMGEVAAAHVAGALSLVDATRIICRRSALLRRLSGRGAMALVELGLAQARDALGPHADRIAVAVSNSPRSTALAGEPEALEQVLSTLTQAGVFVRRINVDVASHSPQMDALLPDLRAALAPITPFAVRIPMRSTVTGEECTGSDLDGDYWARNLRAPVLFHQAIARTLARGPALFIEVSPHPVLVPAMEEALQEGPRGGVVVGSLRRGQGARQSLLESLGALYAAGHPVDFSRLYRAGGRVVRLPSYPFQRQRYWFDLDAGRALGVGGQPDVRLRDHIEGAPAAERQRLVEEAIGAHISHVLRLSPEAIDVTEPLRTLGVDSLIAMEVRNRILTELRVELFVSRVLLADGIRQLAREVLDRMQLPEATAVDAATTLRTMEEGEL
>NZ_CP012159.1|WP_169796675.1|7639161_7642521_-|amino-acid-adenylation-domain-containing-protein
MNALGAFAELVRRGAQITADGDRLRYRTAKGVLGDADLRMLKEHKPEILRFLAGRKAVRLSSVQERLWFLSRLDPSGVGYSFAFTYRIRGPLDVQRFGEALQVMLRRHPALGAVFVEIEGTPLQLLGAPPAVETPCIDCRDESLEVATARIRNLLAAPFDLARGPLLRSCLARISPEEHLWTLTMHHLVADGRTFGILVRDLSLALATPALDVPPSDAPRLDYADFVEWERLRADSPERDENLDYWVRQLGGTPDLDLPLDHPRPPVRTHRGGQATIQLPNALLTGLEAFARSEEATRFSVLLAVSFALLRGYSRQEDFAVGSPHANRADAGFEDTAGCFVSTLVLRADLSGDPSFRDLVRRISEMCIDAWDHQDASYERLVSRLAPARDTSRNALFQVFFALQNVFEPLEIPGASAEMLLLDTGLVQFDVELHFFLGGAGKPTGILLYNRDLFEDRTMRLMAERWTRLAEALLEQPDQPLGKISFLSADERQRALDAFGDTRAEYPRATRVEDLFAEQVRRTPDRIAAICAGERVTYAALEARVEALAGAILSLREPGSTLGILLDRSVDMLASLLAIPRAGAAFLPIDPALPPERIAFMLEDSGVQTVLTRSEHLAALPRGVGWVLVDALPASPGADPSASGARSPSAADAAYLLYTSGSTGKPKGVLVSHRSLVNLLHAMAHLPGIAPDDVLCAVTSLSFDIALLELLLPLVRGATVVIAQQHEASDPIALAALLETTGITVMQATPSSWSMLLDAGWTGRPTLRALCGGEPLSRALADRLLDACAEVWNLYGPTETTIWSTRWRVTRGGPVSLGIPIENTRLYLLDMRGALCPPGLPGELWIAGDGLSRGYLNRAGETARRFQDLHDLVGHPEPAYRTGDLVRMLPDGSLVYLGRTDHQLKVRGHRIEPEEIEHTLRAHPGVREAVATQTATGALVAHVLAQGSPRISEPTLREHAARSLPGYMVPQRCLIHDRFPRTPSGKIDRKALSLIPLSPTIQAPPLREPPLDDIEASVADLFTEVLGVTEVGRWDNFFELGGHSLVAARVLYGLQQRHSVQIGLHELFQRATVSGLATRVKELVQRRTNDDFVIGEALARLESMSEEEAAQLFAQLVGQ
>NZ_CP012159.1|WP_050433174.1|7638164_7639145_-|thioester-reductase
MDAADRIKQLSDTKQLLLRKLLENKNIGGEMLLRLEGSNLKILREGSPILFVFPATDGSVSYMRSYLPYVPEGWGVYGCQTPGLDGEQAPLRTIEEIVAHNLRMIRRVQPNGPYYLAGNCMGGLPAYEAARQLQDSGEETALILHLMPNFNRPWKKLPGESSLQMRGFMDYTFIIERILKVQLNLPFDRLATLDEVAQQAAVVEHIKLGGWLAGVDLLAFQERMKTYQASLEAMLTYQPRGGLRGRMVVLAVGEQERNEVELPLDSPYAAPLRVLPPEQTDVIHVDADGGALFDGSEPHISKIGDQLLRILEAVPNSGVRPALLTG
>NZ_CP012159.1|WP_050433173.1|7635948_7637673_-|AAA-family-ATPase
MHALPGGAARYKATLDWLLAWIQAARPTMEGLREVLAQRFDAPGRGAAESCLALLQGAGLLVRRGERLDLTEAAASYCRSLDAAALFERLHEGYLGLLEALALIEHPGAEDTRRRGRLLAALVDVPERSAAQLGVREGWLRSLGLLERAGTRDVLTPLGHHVLATHADEVREILRRTDDLLFEERQTDAEWAEAVALGFEAEERAADEVWPSEARQGAPDVAPSLNIEGRGGGESRGMAMPPRWNAARLELRPEQVLPHLGDLELQRRLVDRICAALASGKHLLLVGPPGTGKTEIARAIGRAAEAAGYCAGVLAATASGDWSSFEAVGGYALQRDGALRFRPGVFLSALEQHAWLVVDELNRADVDRALGELLTVLGGHGTTTPYALEDGRLVSIGPEPERTHQVPPPFRMLATLNTWDRTGLFRLSYAAQRRFAIVHVGVPDDTGYARLLERNAACAGPAPALTSRGVAALTRLFRGAGILGIRPVGPAIALDMVRYLRQRGDLAESLAEAALLFLLPQLEGLDPEPAAEAYRRILAAIEPVTSPEALAEVDGRLIDALSLSFPNSSPRRGR
>NZ_CP012159.1|WP_050433172.1|7634698_7635952_-|hypothetical-protein
MNDAPWEAYLASSFPAYLLPDATRRELTEGAAAQLLERLGGGPDALGLLRATSLAARHADAIEAFCLRALPEFLPRLPLRSTAGPRAWEGRLPGRPDLAATLRQRLAGHPTRFVTRDRVADLGRPEDTVLAATARRLRALLARLDAADLGAALGLSRASACLDALDQALSAPSLTSIPDERPARAHEDAALAAAHPTYALAARLHRALREAEAARDPGTLAQLVAQGALLPLKASTRFELAVLLRLVEALEAALDARSPGRFHLRRTAVQQGRREIAALEASDGATLRLFYNQACLPPGPHERTVRRYLGFQGRLRPDLVLLVEAPGAAPRAVLIEAKLSRDPTYLAQGFQQAWLYRHEYASWLTGWPKVVLVMPAPVPTEPRHDDDVIAVGWDGWVGESLLHGVLTGIVAPTCNRA
>NZ_CP012159.1|WP_050433171.1|7633126_7634596_-|MFS-transporter
MRVTHRPLTTVALALSLFMAALEMTVVSTAMPTVVGELGGIQSYAWVFTAYMLASTVTVPIYGKLSDLYGRKPILLFGIVLFLVGSIASGFSASMNMLIAFRTLQGLGAGAMQPVSLTVVGDLYTKEERARVQGVFSGVWGLAGLLGPLTGGLLVKYLSWHWVFFINVPVGLCTIALLLGFFHERIESRPQKLDFAGAALLSAGVVALLFGVQGTDQSYLWLPVAAALLVAFVFVERKVADPVIPMDLFKIPAIAISAAAGALFSAAMFGATTYVPLYVQGVLGGSPTLAGGMITPMIVGWPLASLVAGRLLLRTGYRPLIVGGLGLAVLGTGLLALLLEPGASILVPEIAMGMFGVGLGFSATALLIAVQTSVGWELRGVATASNMFFRTIGGAVGVGLMGGVLVSHLLRDPTVPLSAANELLGPEHGRGLPPELLATMNGALGAGLSINFWIICAFAVAAFAAGLFFPRVDRSPAASLSVAEGAAPH
>NZ_CP012159.1|WP_169796674.1|7631932_7633084_-|SGNH/GDSL-hydrolase-family-protein
MIGTLAVVALACGSSDEGDSRNSGSGAGSSEGSGAGPGEGGSGAGGVGGGNVSPDVHLIGRFDKTNPTGPRFAWPGSEVQARFKGTGIQARLHDTGSNYLTVVIDDGAPTVLELKGPDSMYTLAKELPDGEHTVLLSKRTESSLGIVQLLDLAPIDGEILPSPPPYDRHIEVVGDSISAGYGNEGNGPDCSFSAATENEHMTYGAIASRALSAGHTTLAISGIGAYRSYDGTTEAQMPVRFLRTLAEDATSLWDFSLQPDVVVVNLGTNDFSAGDPGQPFIDAYTAFAEDLRTRYPDAHILCAVGPMLSDGFPQGEMRLTRVKQHLQTVIDTRQQAGDTRIGFVDLGELDPADGLGCDYHPNLTTHEKMATRLVDAIEAATGW
>NZ_CP012159.1|WP_050433169.1|7631461_7631905_+|hypothetical-protein
MSLLTDEPRTVGAHSIAFEPPCLAIVRLKGRLREEEIRRLREHMNAGASRQPFTLFLLDLSAAGEVTPGARRYIAHGPLKTPYRGMALFHGSFHARLMAKLLIGALNTFTKLRDNPVALFGSEKDARAWLLERHRKLLHAASPPAVV
>NZ_CP012159.1|WP_050433168.1|7629626_7631177_-|NAD(P)/FAD-dependent-oxidoreductase
MDKTTDVLVVGAGHNGLVAALLLAKRGLRVRVLEEKAVIGGATRTERPFAKVPNLAISSASYLVGLVPPELLQITGVDLPLKRRDPHYFLPTTDGRYLLFGSDQEAMRAQFIRFFSEADWRANQAMQAEIAQIRDDIAPTWLSQPYSIEETAERYVRPALRRAFIDLCRKPVRDYLERFDFKSDLIKAMYATTDGFSGLNGTWDSPGTGMNFLVHNMCRLPGADGTWMICEGGMGTIASRFADAARAAGATIETNVGVQRILVENGAAVGVVTSSGDEIRARTVVVNADPFRMRKLVGQDQFPAEYNQRLDAMELDGTTFKVNLALRGLPRFTCLPEDRGQYGPTIHLLPEESGVIQSLTDSFRAVQEGRLPEFPTIEWYIHTTIDPSMRDTEGHHNAALFVQWVPYRLAEGTWAEQETRYAQHLLSICDRFAPGTSDLVADMFILHPQKIEEYIGIHRGHIHHVDNRFGFADRVPHRQPVAGLYSASAGTHPAGSVIGCAGHNAAMCALEDLGRR
>NZ_CP012159.1|WP_082362841.1|7649162_7650521_-|sorbosone-dehydrogenase-family-protein
MNERQAGTHRARRWSAGTLLVSIGVVAACSSGGDDGPKGPSEPELEILTGADAMGDWTTDAPGVKRKITVDDLPEPYHTGFAFSFPAIAPRPEGAWPLVPPNFTVTEYATGFTQPRIVRVAPNGDVFVVDSNAGRVEILRDADGDGVAESRATYTDGLTRPFGLAFFPSGSDAPTHVYIANTGSIIRFPYQVGDTEPRGAAETLVSDIPSGEESVGGGGHWTRDLVFSKDNTRMFVSVGSRTNAADDDTEVRRANILAYSPDGKNEVIYASGIRNPVGLAIEPTTGDLWTAVNERDELGDDLVPDFVTRVREDGFYGWPWYYLGQFQDPRHEDLHPDLREKSIIPDVLVQSHSATLGLTFYTGTQFPADYSGDLFVAAHGSWNRSKRTGYKIIRIPIENGQAVGYYEDFMVGFVIDNNRVWGRPVGVAVAHDGALLVTDDGSGTVWHVAYKK
>NZ_CP012159.1|WP_050433178.1|7650635_7652774_+|hypothetical-protein
MSQRDARFRRRSRVSLAGLLAGAVGACVLGAPSDARAITAFASDCNFDFQDVYNPGDAVCVTGEMDIVPPGKICAEGYLHIVPAGSANPFADVTQGGANYILGCAGAGAFYDEYVWLPPLMPGQYEIVIDQYPFSGAFNPATDYRTGGVAFRVSDAPMVLSVDVGAIKLAAADGLAYAKAIKDLAEYLALVDYLSTIVDWTGSFGLGGGLAAIALDKFCTATKLDCPTSYNSAVITIGNKILEGISESLSLKYLAIIADPPDPNFGAVVGLNGADALALGAPWTPGANREIPRGQIAAAQHLATQVAAYDALVPSVEKLQGARIAGSNLGATLQAEKTKAYAELALSAGEGLLAELDTLASFLESKGTLNSGVDVADLQEKMAALATNGFSAEEVAILRSFGASEADIEQLRVELPQRAIPASVDWAALLGAMRGSFESVRPALVDLAAQAEAIRAENAPYAFRPGPQASINAPASGQVGTAMTLSAAVNHFDPSAALTYGWDTDLDGDFDDGAGSALSFTPVAPGRTVVSLRVRDASGHADIVHTTIEVAPSGSPPEFVEVTPGEMAPFADVDEVVNFSARAEDADGDAVTIRWAVDGVEQATGSTFAFTMPDEEPHRVEVVAADTDPYSPDARAVFVVRAARWQNGSNGSGAGGPGGPSSGSGAGAGAGEGDGSSSGCGCEVPSGAGSAGAPLAALALVTLLAARRRRLG
>NZ_CP012159.1|WP_082362842.1|7652947_7656733_+|ATP-dependent-RNA-helicase-HrpA
MKRTPPPPAAPSRKGPPAPVDETRSPVTFPEELPISARVRDIAEAIASHQVVIVAGETGSGKTTQLPKICLAMGRGLDAHIGVTQPRRIAATSVAARVAKELDVELGREVGYKIRFADRTSRSTYVKFMTDGILLAELQGDPLARAYDTIVLDEAHERSLNIDLLLGLMKRLLPKRPDLRVIISSATLETERFAAFYGNAPVIHVSGRTFPVEVFHRPPRDGEGELSEHVANAVEEITSLDPREDMLIFLPGEREIHEVEGELASRNLRHTVVLPLYGRLSQADQQRVFQSLPERRIVLATNVAETSLTIPGIVYVVDAGLARVNRYSARTGVTQLQIEPISRASADQRKGRAGRVQSGCCFRLYEEQDYLSRSAYTDPEILRVGLAGAILSMKSMGLGAIEEFPFLDPPPRKAVEEGYRVLEELGALDAKGDLTDIGKKLSRLPLDPRIGRMILAGAEENALREILILAAALGAQDPRERPLAAQKQADDAHRKFRDEASDFAGLLKLWHFYQDAQERMTRGQLRKLCRDNFLSHLRLREWSDVHRQLSEIARDMGLRPGTQAASDEAIHRAILPGLLSRIGMWQPEKRVYAGARQTRFVLHPSSGLSRKPPAWMVAAELVETSQLFARMAARIDPVWLEPAAGALCKRSHGDPHWEQRPAQVMAKEQVSLYGLPIVRDRRVHFGPIDPVASRRVFLLHALVRQEYAGRGAYQDHNQGVMEEARRLRDKARRSDLLADEDTLLRFFDARVPEGIYSGKTFEAWRKEAEEKDPRVLHLSLADLLLDEAAELTAESFPDTLELYGASLPLTYRFEPGEDDDGVTVTLPLALLPQVDPAVLEWTIQGWHEEKVTLLLESLPKALRRELGPAREVGRELAAAHPPFKGPMLATLGRAIQDRTGIRVPPDAWDLADLPAHYRFHFRLVDAADKVVGEGRDFRELKERFGSRAREAWGRATAEGFPKEGLTSWSFDALPERIPMNVGGVKLWGYPAVVDTGSAVSLRVTPSRELADEATRSGLRRLLLLGLGSTAAKLEQQLPGGLDKGLLAERVALRASPLARESPHLGPRAQLARRALDEAFKLDASETFPRTRADFQARLAEGRAGIGAALPRLGRLAQEIAAELDKAEGALRSLSARPIARSVLDDVRAQLAHLLPPGMFLSTPTERLVHLPRYLRAIQVRLERLPNGPQKDQSKAEQVLPFWNNWLKHREGLRARGVPPEDLEAFRWMIEELRVSAFAPELKTAVPVSPQRITEQWRALTG
>NZ_CP012159.1|WP_050436158.1|7657056_7658883_+|TonB-dependent-receptor
MIVEGERNPAGSRGLSRREIREMPGVLGDPYRVIEIAPGVTPTVSGFPYFFIRGAPPGNIGYTFDGIQVPLLFHVGGGPSVIPPALVQRVDLHLGPYPARFGRLAGAVVEAEAAPPPYDFRGEASLRLGDLAGHVEGPVRDDLTVFVAGRWSAGVALITALVPSVDLNYGDYQARAIYEPRKGERISVFAFGARDYLAAAINGETPEVLLDSDFHRLDLRYGRDFDSGTIDAAVTLGLDQSRGLGGVERASDWKLGARTRFVRQLGSRAILRGGLDIALDDYDIDKGGAGGSGGLFPEVSTGQLQDAFSELFQSRLDVAVGAWTEATVALSDRSTITPGLRVDYHTSMGDASLAIDPKLVGSFGVGKHLKLIPAIGVASQRPGFLPLPALQIAGIPGGLQRSLQTSFGAEVEVGPLQVGGTLFRQVTFGLTDALGTGRGTELSSERFLARSLGDAYGLEIGARGALRRDILFMVSYTLSRATRERDGVTVPSAFDRTHVLHAALLYDLGRGWRAGVRHVFYTGFPADEVAAGRPLNEHPDRVRPFYRFDLRVSKRWRVGETGYINLILDLQNATLSREVLDVTCDAAGCSPRIFGPITLPALGLEAGF
>NZ_CP012159.1|WP_050433179.1|7659571_7660867_+|PAS-domain-containing-protein
MLTEEPTYDVLKAENEFLRARVVELERALGECEELTEHERRVPYRKIFDALPVSLGVYRRDGLNVAMNASSLELIGGVREDIIGKFNIVSDPSSITAGFVQNFERAAEQGKKITMPPCAYDTTGSSLATVDERVVWTETTYVPIHGDKGVEFLVECNVDVTDRQRTQRALEEKHALIQTLIDNAPMSIFASNLEGQVTLVNRRCAEALRIPPQEILGKTARELLPPEMARTSIAQDLEVIEKQAAIEWEQEQMLADRPGDLILTKFPLRDASNRINGVCGISIDVTERKRAEADNRRLQEEIIRIQEENLRALSTPLIPIADRVVVMPLIGSVNDARAQQVMETLLDGVTRHQATIAILDVTGVPIIDSHAADALLKAAQAVSLLGARIVITGIRPEIARTLVELGADLHGVVVLSTLKSAVAHALRGHIR
>NZ_CP012159.1|WP_050433180.1|7661171_7663931_+|beta-propeller-fold-lactonase-family-protein
MYGLRLRRYLTALVAATPLSALTLAAPADAAPNYTLFESGHVRPLAMSPDGKHLFAVNTPDGRLEVFRITSSGIEHRASVPVGVDPVAVAARTNAEVWVVNHISDSVSIIDVSNPTRARVVRTLLVGDEPRDIVFAGPGRRRAFITTAHRGQNSPIDPQFTTPGVGRADVWVYDAMALGPALKAPPLTIVTLFSDTPRALAVSPDGTKVYAAAFHSGNQTTVVSDLLVPDGGEAMGGVPGPNTNFQGLPQPESSIIVKYDGANWLDILGRSWDDQVKFSLPDKDVFVINAMANPPTQLAGSAGYYTGVGTILYNMAVNPVSGKVYVSNTDALNDTRFEGPGIYAGETLRGHLHESRITVLGTGSVLPRHLNKHIDYDTCCAPLPNSENAKSLALPQEMAVSSNGATLYVAALSSQKIGVFDTAALENDTFVPDESTHIPLSAGGPGGLILDEARQRLYTLTRFDNAISIINTATRTETAHVPLFNPEPAHIVQGRRFLYDAAFSSSHGDSSCASCHVFGDFDSLAWDLGNPDAETITNPGPFLLEDPDDPNYRPLKGPMTTQSLRGMANHGPMHWRGDRTGGNDAPSVQPDSGIFDEKAAFHQFNPAFPELLGRDSEISHGDMDVFAEFALEITYPPNPVRALDNALTPDQQAGRDFYFGPLSDVSHSCEGCHHLDPNGNPGASRPGFFGTEGLSTFEGTPQTMKVAHLRNMYQKVGMFGMAEAPGIEPGDNGFTGDQVRGFGFLHDGMIDTIFRFMHFGFGESPENPEGFPIGPSGTLLRRQVESFLLAFDSNMAPIVGQQATLSATSGADVHARITLLRKRAEAGECNLIVKGRALQKEIGFVYRGGGLFETDRAQAPFVHDLALRLLGQVLSVPLTYTCVPPGSGYRLGVDRDGDGFRDGDELAAGSDPANPASTP
>NZ_CP012159.1|WP_050433181.1|7663983_7664955_-|quinone-oxidoreductase
MFAIRPHQPGGPEILKLEELPTPAPAVGEVLVRIEAAGVNFIDIYHRSGQYPMPQPMPLGLEGAGVVEAVGEGVTEVGVGERVAWAAGPGSYASHVVIPSSKLVPVPEGVDARMAAAAMLQGMTAQYLAKTTWPLRPGDLCLIHAAAGGVGLLLCQMARRAGAFVIGTVSTEEKAALARDAGAHEVIVYTQQDFAEETQRLVGGKGVSVVYDSVGRDTFERSLSCLRRRGMLVLYGQSSGPVGPFDPQLLARHGSLFLTRPTLGDYTATREDLLTRASDVLLGIQKGELTLRIGVTYPLAQAAEAHSALGGRATSGKILLLPD
>NZ_CP012159.1|WP_050433182.1|7665124_7665304_+|hypothetical-protein
MANTSKWNVRLRHEWLSSPLKKKRVKRSQKARIGLLDAENRKATKEERKQASSEQQAAG
>NZ_CP012159.1|WP_169796677.1|7665398_7666307_-|alpha/beta-fold-hydrolase
MWRASHRVDLGDVTLAYEVSDERPPAVSAAARADVEPIAARPLVIAAHGFPDDATTFHAQVPALVAAGYRVVTPTLRGYAPSGVPRSGRYDPVTIARDLLALADRLSPGTPVRFVGHDWGAVAGFALVALAPHRVSHFAALAIPHLRALLPRMVTPAQLRRSWYMGLFQIPGVAEARLRAADLALVDRLWRDWSPGHVASVEELRSVKRGIRERIGPVLGYYRAIPCVLSGPERRLLLAPTTVATLRLHGMDDGCIGVACGRGEERFYEGRFESRQIVNAGHFLQRERPEEVNEALTSFFAC
>NZ_CP012159.1|WP_050433184.1|7666432_7667800_-|zinc-ribbon-domain-containing-protein
MKITCQSCQSKYTVSDEKVQGKTVKIKCRKCGATILVNSSGAVAGTGGGIADPVSAAGVPGDATTYLVNVAEGDQRTLSLPELVSLYQSGAVTADTYVWADGMADWQPLGQVESIVSALSGGTSADVAPAYSTASEPVAAPSAAAAPAYGATSGYGAGPSSGGGVSAEAVAASAPRAARRDPAKPSADLFGAGGRESQRPSDDVATSAPLFSGGGGAGRREENSVLFSLSALTSKSSTVSASPPAKTTARGDDSGLIDLKALAAGAPAPSPAAAIVQDDGGLFQLSAPIGALGAPASAAPSVAPIADTPPKNRGPMFVGVGIAVAGLAIAGAFFAAKGGDPQVQTTGAETPAPVQTTAPTPEPTPEPTPSAIDPGATAAAPTASASASAVAASKPVTSRPASGGSTTKSGSGSGAASKPPTAATPAATAKPPARGNCGCRPDDLMCNMQCSAKGK

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Crispr_ID: NZ_CP012159_34

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012159_34

7770902-7771093

Orphan

Consensus_repeat	Method
GCCGCCGACGCNCCCAGTTTCGC	CRT

4 spacers

The CRISPR arrays of NZ_CP012159_34

>merge|NZ_CP012159|34|7770902-7771093|CRT
GCCGCCGACGTACCCAGTTTCGCGGTGAAACTGGGTGTGTCGACGCCCGCCGACGCCCTCAGTTTCGCAGTGAAACTCCCTCCGTCGGCCGCCGACGCACCCAGTTTCGCCTCAACCACCGGGTAGGTGCGGCCTACGCCCCCAGTTTCGCTCCGGGATTCTGCCCGCGGCCGACGACACCCCCAGTTTCGC

>NZ_CP012159|34|8|7770902-7771093|CRT
GCCGCCGACGTACCCAGTTTCGC	GGTGAAACTGGGTGTGTCGACG
CCCGCCGACGCCCTCAGTTTCGC	AGTGAAACTCCCTCCGTCG
GCCGCCGACGCACCCAGTTTCGC	CTCAACCACCGGGTAGGT
GCGGCCTACGCCCCCAGTTTCGC	TCCGGGATTCTGCCCGCG
GCCGACGACACCCCCAGTTTCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012159.1\|WP_050433266.1\|7782998_7783889_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_156338902.1\|7773633_7774017_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050436167.1\|7771191_7772037_-\|N-acyl-homoserine-lactonase-family-protein	unknown	unknown	gnl\|CDD\|293815
NZ_CP012159.1\|WP_050433257.1\|7764025_7764643_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050436168.1\|7772498_7773410_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176164
NZ_CP012159.1\|WP_050433259.1\|7768772_7769288_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050433261.1\|7774042_7775128_-\|radical-SAM-protein	unknown	unknown	gnl\|CDD\|234672
NZ_CP012159.1\|WP_050433258.1\|7765487_7766546_-\|NAD(P)-dependent-alcohol-dehydrogenase	unknown	unknown	gnl\|CDD\|176186
NZ_CP012159.1\|WP_050433253.1\|7760228_7761173_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176163
NZ_CP012159.1\|WP_050436169.1\|7781732_7782623_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050436165.1\|7764666_7765434_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|180440
NZ_CP012159.1\|WP_156338903.1\|7780749_7781466_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050433264.1\|7779059_7780493_-\|MATE-family-efflux-transporter	unknown	unknown	gnl\|CDD\|240543
NZ_CP012159.1\|WP_082363530.1\|7769395_7770061_-\|molybdenum-cofactor-biosynthesis-protein-MoaE	unknown	unknown	gnl\|CDD\|238385
NZ_CP012159.1\|WP_050433255.1\|7762228_7763044_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197666
NZ_CP012159.1\|WP_050433254.1\|7761275_7762148_+\|aldo/keto-reductase-family-oxidoreductase	unknown	unknown	gnl\|CDD\|236676
NZ_CP012159.1\|WP_050433256.1\|7763142_7763979_+\|NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|223528
NZ_CP012159.1\|WP_082362856.1\|7759434_7760193_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|225117
NZ_CP012159.1\|WP_050433262.1\|7775144_7775396_-\|MoaD/ThiS-family-protein	unknown	unknown	gnl\|CDD\|340452
NZ_CP012159.1\|WP_050433263.1\|7775452_7779025_+\|protein-kinase	unknown	unknown	gnl\|CDD\|270916

Protein	Function_ID	Function_description	E-value
NZ_CP012159.1\|WP_050436167.1\|7771191_7772037_-\|N-acyl-homoserine-lactonase-family-protein	gnl\|CDD\|293815	cd07729, AHL_lactonase_MBL-fold, quorum-quenching N-acyl-homoserine lactonase, MBL-fold metallo-hydrolase domain. Acyl Homoserine Lactones (also known as AHLs) are signal molecules which coordinate gene expression in quorum sensing, in many Gram-negative bacteria. Quorum-quenching N-acyl-homoserine lactonase (also known as AHL lactonase, N-acyl-L-homoserine lactone hydrolase, EC 3.1.1.81) catalyzes the hydrolysis and opening of the homoserine lactone rings of AHLs, a reaction that can block quorum sensing. These enzymes belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions.	3.0291e-78
NZ_CP012159.1\|WP_050433264.1\|7779059_7780493_-\|MATE-family-efflux-transporter	gnl\|CDD\|240543	cd13138, MATE_yoeA_like, Subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins similar to Bacillus subtilis yoeA. The integral membrane proteins from the MATE family are involved in exporting metabolites across the cell membrane and are responsible for multidrug resistance (MDR) in many bacteria and animals. A number of family members are involved in the synthesis of peptidoglycan components in bacteria.	5.57185e-141
NZ_CP012159.1\|WP_050436168.1\|7772498_7773410_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176164	cd08475, PBP2_CrgA_like_6, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding fold. This CD represents the substrate binding domain of an uncharacterized LysR-type transcriptional regulator (LTTR) CrgA-like 6. The LTTRs are acting as both auto-repressors and activators of target promoters, controlling operons involved in a wide variety of cellular processes such as amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to name a few. In contrast to the tetrameric form of other LTTRs, CrgA from Neisseria meningitides assembles into an octameric ring, which can bind up to four 63-bp DNA oligonucleotides. Phylogenetic cluster analysis showed that the CrgA-like regulators form a subclass of the LTTRs that function as octamers. The CrgA is an auto-repressor of its own gene and activates the expression of the mdaB gene which coding for an NADPH-quinone reductase and that its action is increased by MBL (alpha-methylene-gamma-butyrolactone), an inducer of NADPH-quinone oxidoreductase. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	8.41779e-93
NZ_CP012159.1\|WP_050433261.1\|7774042_7775128_-\|radical-SAM-protein	gnl\|CDD\|234672	PRK00164, moaA, GTP 3',8-cyclase MoaA.	1.48036e-105
NZ_CP012159.1\|WP_050433258.1\|7765487_7766546_-\|NAD(P)-dependent-alcohol-dehydrogenase	gnl\|CDD\|176186	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	0
NZ_CP012159.1\|WP_050433253.1\|7760228_7761173_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176163	cd08474, PBP2_CrgA_like_5, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding fold. This CD represents the substrate binding domain of an uncharacterized LysR-type transcriptional regulator (LTTR) CrgA-like 5. The LTTRs are acting as both auto-repressors and activators of target promoters, controlling operons involved in a wide variety of cellular processes such as amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to name a few. In contrast to the tetrameric form of other LTTRs, CrgA from Neisseria meningitides assembles into an octameric ring, which can bind up to four 63-bp DNA oligonucleotides. Phylogenetic cluster analysis showed that the CrgA-like regulators form a subclass of the LTTRs that function as octamers. The CrgA is an auto-repressor of its own gene and activates the expression of the mdaB gene which coding for an NADPH-quinone reductase and that its action is increased by MBL (alpha-methylene-gamma-butyrolactone), an inducer of NADPH-quinone oxidoreductase. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.59646e-90
NZ_CP012159.1\|WP_050436165.1\|7764666_7765434_-\|SDR-family-oxidoreductase	gnl\|CDD\|180440	PRK06172, PRK06172, SDR family oxidoreductase.	1.14263e-88
NZ_CP012159.1\|WP_082363530.1\|7769395_7770061_-\|molybdenum-cofactor-biosynthesis-protein-MoaE	gnl\|CDD\|238385	cd00756, MoaE, MoaE family. Members of this family are involved in biosynthesis of the molybdenum cofactor (Moco), an essential cofactor for a diverse group of redox enzymes. Moco biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea and eukaryotes. Moco contains a tricyclic pyranopterin, termed molybdopterin (MPT), which carries the cis-dithiolene group responsible for molybdenum ligation. This dithiolene group is generated by MPT synthase in the second major step in Moco biosynthesis. MPT synthase is a heterotetramer consisting of two large (MoaE) and two small (MoaD) subunits.	9.87623e-53
NZ_CP012159.1\|WP_050433255.1\|7762228_7763044_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|197666	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein.	4.15851e-17
NZ_CP012159.1\|WP_050433254.1\|7761275_7762148_+\|aldo/keto-reductase-family-oxidoreductase	gnl\|CDD\|236676	PRK10376, PRK10376, putative oxidoreductase; Provisional.	0
NZ_CP012159.1\|WP_050433256.1\|7763142_7763979_+\|NAD(P)-dependent-oxidoreductase	gnl\|CDD\|223528	COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism].	1.0584e-46
NZ_CP012159.1\|WP_082362856.1\|7759434_7760193_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	8.58655e-16
NZ_CP012159.1\|WP_050433262.1\|7775144_7775396_-\|MoaD/ThiS-family-protein	gnl\|CDD\|340452	cd00754, Ubl_MoaD, ubiquitin-like (Ubl) domain found in molybdenum cofactor biosynthesis protein D (MoaD) and similar proteins. MoaD, also termed molybdopterin synthase sulfur carrier subunit, or MPT synthase subunit 1, or MPT synthase small subunit, or molybdopterin-converting factor small subunit, or molybdopterin-converting factor subunit 1, is a conserved small sulfur carrier protein that has beta-grasp ubiquitin-like (Ubl) fold involved in biosynthesis of the molybdenum cofactor (Moco), an essential cofactor of a diverse group of redox enzymes. MoaD is activated in an ATP-dependent manner by sulfurtransferases similar to the activation mechanism of ubiquitin-activating enzyme E1.	1.18727e-28
NZ_CP012159.1\|WP_050433263.1\|7775452_7779025_+\|protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	2.11865e-61

>NZ_CP012159.1|WP_082363530.1|7769395_7770061_-|molybdenum-cofactor-biosynthesis-protein-MoaE
MVLGSVRLLEKSGGRSGHFRREEAEPRPPVTSEVDASTTAVGSDAVAGPAGASRGRIRTEPLRLDEVVAEVAHAGAGGVATFLGVVRDHNDGRAVTLLEYEAYATMAEGELERLLAEIAAEIPGVRIAAAHRVGALQVGDAAVVCAASAPHRGEAFRACRLLIDRLKERLPIWKREHGPDGPYWVGWEDARCSPEGHDHAGHAHHPPHAHGSRGGSAGDKS
>NZ_CP012159.1|WP_050433259.1|7768772_7769288_+|hypothetical-protein
MPIGPETPIVNARPNTVARYLRLDLTETEQSALGDALLARGMNEDDWLDWYDARLCLFDLERGAAPLADIARTVLGRSPVTLVSIDTFVRFDWSAFNGLAALEPVMGTLPGALPSAREWRYFAPDDTRPPYLWASHEASGLQVAGVLDEPLWDAWWSAFDLATSAFPRRTG
>NZ_CP012159.1|WP_050433258.1|7765487_7766546_-|NAD(P)-dependent-alcohol-dehydrogenase
MTVRAFGAHAAIKPLEPIDIVRRAPGPHDVQIEIAFCGVCHSDLHTVRGEWSGTLYPCVPGHEIVGRVSAVGVEVTRFKEGDLVGIGCIVDSCGTCASCTDHLEQYCERGMTGTYNSPTPGAPGHTLGGYSQRIVVKDAYVVKIRHPREQLAAVAPLLCAGITTYSPLRHWKAGPGKKIGVVGIGGLGHMGIKLAHAMGAHTVAFTTSESKREDAKSLGADEVVVSRSASEMGAHANSFDMILNTVAASHDLDAYTRLLERDGALVLVGVPEHAHPSPAVFNLVGKRRSIAGSMIGGIAETQEMLDFCAEKGLVADIELIRIQQVEEAYARMLKSDVKYRFVIDNASLEDRS
>NZ_CP012159.1|WP_050436165.1|7764666_7765434_-|SDR-family-oxidoreductase
MNPTYDFKGQVALVTGAAMGMGLATARAFAQSGASVVLADRDGTLATTEASKIVDEGGVAIGMACDVTDEAQVAAAVDRAVAEYGRLDMAFNNAGIQVPPSDAADEPTENFHRVVAVNQFGVWASMKHELRVMRAQGSGAIVNNSSLGGLVGLPQRAAYHGTKHAVLGMTKSAGVEYAPRGIRINAVCPGTIDTPMVQDMLRGQADAMKEIMKEQSIGRLGRADEVAAAVLWLCSPGASFVMGVGLPVDGGFTAH
>NZ_CP012159.1|WP_050433257.1|7764025_7764643_+|hypothetical-protein
MMTSPADAPPPWPPQITRRPPPPVAGFSSQMRLWSFWTLISVSWAVPAWNEESLVAKLTLGAITLIGLCGGLFGLARAWRERQAYPRLLAAHAEKDRRLVPAWARVDKSVFGAERVATSDGVDRLLGYEMALELTVWLPDTREADHRHALERLTLSCRHDVEPHVASALGTSTWLEIAYDPLERTILPQHLVTPNGAKIPVQPLR
>NZ_CP012159.1|WP_050433256.1|7763142_7763979_+|NAD(P)-dependent-oxidoreductase
MKILVTGATGKVGSRLTRHLAQRGDHVRALVRDPARAATLRGEHGDRIELVQGDLLDADSLTEAVRGVDAVVHCAAFFRGATPEQAHAVNDQGTQYLANAALAASVKRFIFTSTGLVYGGNGGRLANEDAPCAPTSAYPESKLAAERFLLSVDGLDVRVLRLPFVYGDGDPHIEEIVPIMRSFAPTQRMSIAHHADVAQAVARLLDAPSPAHRIYNVVDDEAPDLATLLASVGAPPPDGSNAEHGRAFDVLLDGRRIREDLGFQPKYPRLADAVAAGA
>NZ_CP012159.1|WP_050433255.1|7762228_7763044_-|helix-turn-helix-transcriptional-regulator
MYASGLHQHRFAPSAAVAPAVAALWVNECGFDTAGVSIPRAEPHLVVRFGPSARRGLDFHAIGARQRAHRKVIRSGQRTVMVRLHLGTHGAVFGVPSSVIADRIVPLEDLWGVAATRELGERLFEARQVPEVVAILEEVIARRLPASEAHEAPTQLALDAAARLGTARVNDVAKALGVSERTLRRVFREAVGMSPKEFSQLTRFHRALREARAGLHVDWAGIASATGYYDQAHLIAEFRKIVGVTPRAFLGELRGAASSTTGRERGARSET
>NZ_CP012159.1|WP_050433254.1|7761275_7762148_+|aldo/keto-reductase-family-oxidoreductase
MTDLSHADSYPLASHLVRRLGYGAMQLAGPGVFGPPKDRKAAVAVLREAVAQGVNHIDTSDAYGPHVTNEIVREALHPYRDGLLIATKVGAVRGPTGSWDPAASAADIEQQVHDNLRTLGRDVLDLVNLRSMIRIESPAEGSIEAPLTALAELQRRGLVRHIGLSNVTPTQIAEGRKLTEIACVQNHYNLAHRHDDAIIDQLAAHGIAYVPFFPLGGFTPLQSSALDAVAARLEATPMQVALAWLLHRSPNLLLIPGTSSLTHLAENLASASVRLGAEDLQTLNRLAQHP
>NZ_CP012159.1|WP_050433253.1|7760228_7761173_-|LysR-family-transcriptional-regulator
MDDLADLTAFLAVAREGGFRSAARAAGTSASRMGDAVRRLEERLGVRLLHRTTRSVTPTDAGARLLERISPALGEVRAALDVVNDYRDRPAGRLKLNVPTVASRLVLPRIVPPFLAKYPEICVEIVAEERRVDVVAEGFDAGIRYDESLEKDMVAVPIGPRIQRYAAAASPAYLARRGRPSHPRELLEHDCLGWRLSNGPLHSWEMERDGETIHVEPRGQLITSIGGATEFAVEAAVAGCGIIYLFEEWLRPSIDRGELVPVLQPWWLSFSGPFLYYPGRRYLPTPLRAFVDFIKTTAPSTRPRTRRGDASKRR
>NZ_CP012159.1|WP_082362856.1|7759434_7760193_+|helix-turn-helix-domain-containing-protein
MTTTTTDATPSFSRFIEAVRALGPTDTQYDWLPDGRTTLVFRVLDRGRLGDVCIAGPQTRAHFKNLSGVTRAAAIRFKPGWTVPLVGIPASEVTDRIVPLDDIWGRAGTELYAELLATRDLPQLIQCVSRAFTRRLSQTVEPSSARIARRAARLIEDGEGRVERVAQQLGVTARHLRRAFTENIGVAPKEFARTVRLQRAIRMSANSNDWSRIATDAGYYDQAHLIGDYREFLGVTPTALSKRERGATLEFA
>NZ_CP012159.1|WP_050436167.1|7771191_7772037_-|N-acyl-homoserine-lactonase-family-protein
MAALLVMAMPACGGGEPPPVTPQDGVQAPPSVRVHALDCGRADIQDMSFFGDDGGPRELVAACYLVHHPRGALLWDTGIDDAVARTPGGVVDSGSSIRFRVEMPLRERLSRLQLAPEDVDYVAFSHLHVDHAGNANLFPGATWLLNRRELPWATSSPAPQGIEPALFSSYKAAQIRHLDGETDVFGDGSVTIVPSPGHTPGHQSLLLRLHRAGTFLISGDLTHTHGNWEHRRVPPFNTDQEETLRSMDRLRALAESTGARFVVQHEPDELSVFPPFPGYLD
>NZ_CP012159.1|WP_050436168.1|7772498_7773410_+|LysR-family-transcriptional-regulator
MSDRLRGVVSFVQAAEAGSFALAAQRMGQSRSAVGKAVIRLEEQLGVRLFHRTTRALRLTDDGQAFYERCSRALAELEAAEALLERGRKEPAGRLRVSVPVLFGRRCVAPILVEVAQEYPQIALEVSFTDRCVDLVEEGVELAIRGGPLADSAGLMSRRLGKQVMVVCGSPEYLADRGTPDVLDELALHEGLVYGREGRVVPWRLLDAEGHARELTLPSRIRFDDLEAIAAAAVAGAGLAWLPCWLVADALRAGTLVPVLEGERAFGYDIHAVWPLTQHLPSRVRVAIDALVARVPERLHREG
>NZ_CP012159.1|WP_156338902.1|7773633_7774017_+|hypothetical-protein
MSLNHSILACFFLGSAMFMGCAIGGEPTEDEDDLEVEIVDESEHALPAYDVSFEYFTSKPFASATQTGWRMLTCGGGWMSQGEPSNYVKITRDRCDIPGVGTKSCHYCITVVENDSVAEVCPRIPCN
>NZ_CP012159.1|WP_050433261.1|7774042_7775128_-|radical-SAM-protein
MRTDLLREPPPTPSRPAAPRRSLPVLGQNAARAPLVPRPATPALPPRSVRLSVTDRCDFACTYCRPSRNDGYVEGRLLTSTWRTLLEALRAGGIRRVRLTGGEPLIHPDIVAMVGFIASLGFEDVALTTNASQLTRLARPLRDAGLHRLNISIDTLDPARFSEMTRGGRLAQVLEGIDAALAVGFAPIKLNTVVLRGQNDHELESLLLWAWERRMIPRFLEVMPIAEGARMVKQHLITAAEMRDRLAEHLLPEEAAVEPGLGPAKYIRSRRDPTLRVGFISGTSDTYCDTCDRLRVSSTGVLRPCLATDDGVDASKEAHAGDLNGILARLDEAWRLKPDGTVWKGCTEETAASVSMRAIGG
>NZ_CP012159.1|WP_050433262.1|7775144_7775396_-|MoaD/ThiS-family-protein
MVGAVRVLAFAGVRDVLGKEEVSLPLPAPCTASELLADVCARYPGLVPYQGCLRVAVNGTYADPGDPVRVGDEVALIPPVAGG
>NZ_CP012159.1|WP_050433263.1|7775452_7779025_+|protein-kinase
MSDDAFLPGTILAGRYQVRRELGRGGMGVVYLCRDLVVDERIALKLLCRPGARNRPEDAWWFQEEARALAGLSHPAIVRARDFGALPDGTPFLAMDAVPGRSMHEWLYLAKVNEEPLPWPILWRLVDSVLGALAHAHARGVIHGDLKPSNVLLDMPAGGEPSVHVLDLGLAWLVQDRIDHRLDGSRESAPTVRWGAGTPGWMAPEQIRFAAPHVGAPTDLYSLGCILYACLANREVYEGTNEELLQQHRSAPIPDVPLLPGVPSDVGRFVKRLLAKRPWNRFDFAGDARRVWKRFEASESNSMLTPLPSTLITSGRIPPSRQELLTPDLQEPPDSEEEAPLSVTTSGLLNLRPSPFVARTGERARLMELVAEVVDSPKPVHKFVLLAGDAGVGKSRLSEWLCEEVHERALLVPLRARYRRISAPLDGVVGAVTQHYRLERAERDIVEKVLMNVWEVSSEDEVGKTWVAAAAEWIRPTPPGSNAVGPTGKRFRLDRPELRWLVIRKTLERVGRDRPILLWLDDLHYASPSTFESLMTLHRDAPMLGMLVVATARSEAVETDPAAAARLEESLKAWNGERLDVAPFNAQQMHSLLRETLPLDEAAAEAATARSKGNPLFALQLLHAWAGGGHLALRAGKYYVPRPAMAVQAATTAELWEERLSALPEAMRAGARAAAALGGDMRREVLLVLFEMLGLPAPQSIVAMQRAQLLLATGDRLRWPHALLQEHLLAQLFQQPDASRVFRAASEALSRHPLGTSRRIVRHRAVSLLRAGDVDAAADLIHRHVMDHWKSSRDVSATLRDLAVLDGRPSGEGRPALMGTRLAIHLRYRAEALRLAGRLDEARRDAEEAKRLFEQSGDEENQAHCLRLLGHIASDLGGEAQGRKQVAKALSLFESLGHEQGRTQCEVLLGEIDYLLGDHARARATLASCAARAAVMGDRLGRAQSLLLQSIVEQAAPAPSPDTIRGLLSAARADFDAIGYRLGLAQCELAQAHAEHRLGYLDEARSLVLTARQSFRDLANPRGEAGCERLLSMLALDVDDADLSLEHAESAGRIFERLADPWGLVEARVLLAQIALSRGETDLAREHLIACEGVAVSEAEPKQHRHLTQAWLAAEEGRYHEAAKEIEAARAAFKDSRSGDHTPQLLLRFSRAAWPRPAGSRVAGWLRAMGREQSDGDRASETPAAPDVTT
>NZ_CP012159.1|WP_050433264.1|7779059_7780493_-|MATE-family-efflux-transporter
MRAKAGTDLTTGSIPRHIVTFSLPMIAGGLLHTAYSFINAIWVGQYLGTRALAAVTVSFPVVFTVIGIALGITLASNIVVSQRFGAKRFDELRRVVDASMVLSYGLGIGLTALGELFTPFILRAMDTPPEVFDEAVGYLRIYLLSIPLSFGMIAMRSMLQGMGDSRTPLLFQLASVVLMTVLDPILIFGHFGLPALGLNGTAWATLFAQFVVLIALKVHLHRRRSPIAPSWPRRGHLGAEVGHILRIGIPASIQQSLASLGMVMVTGIVNGFGEISTAAFGAASRIDQIAILPAINFGMAISTLTGQNLGAGHLGRVREIFTWGCIFSGAITLVISAVSVIFPEALLRVFISDPVVIEHGVAYLHIVGSCYIFFSLMFVSNGVINGAGGTMVTTLISLISLWIFRVPVAYVLSRGMNSELGIWYAISLSFIVSMVVSMAYYFAGRWKRAVGEKAAAAEKAKPEPDPAKVFANEVGEA
>NZ_CP012159.1|WP_156338903.1|7780749_7781466_+|hypothetical-protein
MATRATSLSGFVLLAALLAGCESNASIGVIQVAALGASGEPLAGALAAIEEGGLFVPAYVYGAQAGTEPTGEEEIPPTPGYFTTVLPRGPKGIHIFAEGYQVASSEFMLAPKETEVEEVEVRATPMPEGAARPATENAVFSPSSVTPGNTTTLTVDVTAAEEDPISAQVLAIQPGEGLAAAFGPPVPEEEGAEAVPANGTWSATLSAPVERGSYVYYVVAASENRMLAPIITATLIVE
>NZ_CP012159.1|WP_050436169.1|7781732_7782623_+|hypothetical-protein
MRHHILAATAMVGALLAPAIASAANYTLWIHGRSTGGNTQPGSHSYFGHFGSANTAAGVNKRAVNWDGRSRIADQNVHIRNALDCYCTGPNFCYIAAHSAGDAQIGYALAQFGTSSRSNKNATPNASGVCGNSGGTQTGWNIKWIDIASGAGGGSELANLGHWAVSDPLTGDLRTATMRSLYNHNATQGKWFYMFAGAKGTLYSGVLPGQDDEAVAYHSTGGVSQTGSFCNPGDWFCDGTLQTGTGGANKGSTRISLWSNHTVELRDDSEQYGHGAGGSWGGIVGPVRQDMVRYAL
>NZ_CP012159.1|WP_050433266.1|7782998_7783889_+|hypothetical-protein
MRHHLLAATVVSAALLAPGIASAANYSLWVHGRNPGGGTQPGNHSYFGYWGSASTAAGVNKKAVNWDGVGRIADQNYRIRDAFDCYCTGDNWCYIAGHSAGNAQIGYALAQFGTSSRSKKDAKPNASGVCGNAGGTQNGWNIKWVDIASGAAGGSELANLGHWAVSDALTGDLRTATMRALYNHNLTRSIWFYMFAGAKGTAYSGVLPGQDDEAVAYHSTGGVSATGSFCNPGDWFCDGDLLTGTGGAYKGSTLVKLYTNHSVSLRDSNEQYNHYANGAWGGIVGPVRQDMVNYAR

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Crispr_ID: NZ_CP012159_35

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012159_35

7819768-7820446

TypeI

Consensus_repeat	Method
GTCGCCCTCCTCGCCTGAGGGGGGCGTGGGTTGAAAC	PILER-CR
GTCGCCCTCCTCGCCTGAGGGGGGCGTGGGTTGAAAC	CRISPRCasFinder
GTCGCCCTCCTCGCCTGAGGGGGGCGTGGGTTGAAAC	CRT

9 spacers

cas3,cas5,cas8c,cas7

The CRISPR arrays of NZ_CP012159_35

>merge|NZ_CP012159|35|7819768-7820446|PILER-CR,CRISPRCasFinder,CRT
GTCGCCCTCCTCGCCTGAGGGGGGCGTGGGTTGAAACCAAGTGACGCCGTAGTCGTCGTCGTGTCGCGTCAGTCGCCCTCCTCGCCTGAGGGGGGCGTGGGTTGAAACGGCGCCGGCGCTCTGGCGTCCGCGAGAGGTAGGTGTCGCCCTCCTCGCCTGAGGGGGGCGTGGGTTGAAACAACACCGTCTGGTCGACGATGGCGTCGTACAAGGGGTCGCCCTCCTCGCCTGAGGGGGGCGTGGGTTGAAACCACTCACCCGTGTGGATCGTGGTCACGATGGCGGGTCGCCCTCCTCGCCTGAGGGGGGCGTGGGTTGAAACATCAATTGTCAGCGCACGGGACGAGAGGTGACCGTGTCGCCCTCCTCGCCTGAGGGGGGCGTGGGTTGAAACATATCCTCGTACAGCGGCGCATTGGTGAGCGGGACGTCGCCCTCCTCGCCTGAGGGGGGCGTGGGTTGAAACGATGACAAGCCCAGCGACCCCTGGTTTATCCGTGTCGCCCTCCTCGCCTGAGGGGGGCGTGGGTTGAAACGTTTACGACGAGCTAGACCCAGGGGGACACGATGGGTCGCCCTCCTCGCCTGAGGGGGGCGTGGGTTGAAACGTCGACATGTTGGTGTGCAACTGCGACGCCACCCGTCGCCCTCCTCGCCTGAGGGGGGAGTGCAGCGCCTT

>NZ_CP012159|35|8|7819768-7820375|PILER-CR
GTCGCCCTCCTCGCCTGAGGGGGGCGTGGGTTGAAAC	CAAGTGACGCCGTAGTCGTCGTCGTGTCGCGTCA
GTCGCCCTCCTCGCCTGAGGGGGGCGTGGGTTGAAAC	GGCGCCGGCGCTCTGGCGTCCGCGAGAGGTAGGT
GTCGCCCTCCTCGCCTGAGGGGGGCGTGGGTTGAAAC	AACACCGTCTGGTCGACGATGGCGTCGTACAAGGG
GTCGCCCTCCTCGCCTGAGGGGGGCGTGGGTTGAAAC	CACTCACCCGTGTGGATCGTGGTCACGATGGCGG
GTCGCCCTCCTCGCCTGAGGGGGGCGTGGGTTGAAAC	ATCAATTGTCAGCGCACGGGACGAGAGGTGACCGT
GTCGCCCTCCTCGCCTGAGGGGGGCGTGGGTTGAAAC	ATATCCTCGTACAGCGGCGCATTGGTGAGCGGGAC
GTCGCCCTCCTCGCCTGAGGGGGGCGTGGGTTGAAAC	GATGACAAGCCCAGCGACCCCTGGTTTATCCGT
GTCGCCCTCCTCGCCTGAGGGGGGCGTGGGTTGAAAC	GTTTACGACGAGCTAGACCCAGGGGGACACGATGG
GTCGCCCTCCTCGCCTGAGGGGGGCGTGGGTTGAAAC

>NZ_CP012159|35|29|7819768-7820446|CRISPRCasFinder
GTCGCCCTCCTCGCCTGAGGGGGGCGTGGGTTGAAAC	CAAGTGACGCCGTAGTCGTCGTCGTGTCGCGTCA
GTCGCCCTCCTCGCCTGAGGGGGGCGTGGGTTGAAAC	GGCGCCGGCGCTCTGGCGTCCGCGAGAGGTAGGT
GTCGCCCTCCTCGCCTGAGGGGGGCGTGGGTTGAAAC	AACACCGTCTGGTCGACGATGGCGTCGTACAAGGG
GTCGCCCTCCTCGCCTGAGGGGGGCGTGGGTTGAAAC	CACTCACCCGTGTGGATCGTGGTCACGATGGCGG
GTCGCCCTCCTCGCCTGAGGGGGGCGTGGGTTGAAAC	ATCAATTGTCAGCGCACGGGACGAGAGGTGACCGT
GTCGCCCTCCTCGCCTGAGGGGGGCGTGGGTTGAAAC	ATATCCTCGTACAGCGGCGCATTGGTGAGCGGGAC
GTCGCCCTCCTCGCCTGAGGGGGGCGTGGGTTGAAAC	GATGACAAGCCCAGCGACCCCTGGTTTATCCGT
GTCGCCCTCCTCGCCTGAGGGGGGCGTGGGTTGAAAC	GTTTACGACGAGCTAGACCCAGGGGGACACGATGG
GTCGCCCTCCTCGCCTGAGGGGGGCGTGGGTTGAAAC	GTCGACATGTTGGTGTGCAACTGCGACGCCACCC
GTCGCCCTCCTCGCCTGAGGGGGGAGTGCAGCGCCTT

>NZ_CP012159|35|9|7819768-7820446|CRT
GTCGCCCTCCTCGCCTGAGGGGGGCGTGGGTTGAAAC	CAAGTGACGCCGTAGTCGTCGTCGTGTCGCGTCA
GTCGCCCTCCTCGCCTGAGGGGGGCGTGGGTTGAAAC	GGCGCCGGCGCTCTGGCGTCCGCGAGAGGTAGGT
GTCGCCCTCCTCGCCTGAGGGGGGCGTGGGTTGAAAC	AACACCGTCTGGTCGACGATGGCGTCGTACAAGGG
GTCGCCCTCCTCGCCTGAGGGGGGCGTGGGTTGAAAC	CACTCACCCGTGTGGATCGTGGTCACGATGGCGG
GTCGCCCTCCTCGCCTGAGGGGGGCGTGGGTTGAAAC	ATCAATTGTCAGCGCACGGGACGAGAGGTGACCGT
GTCGCCCTCCTCGCCTGAGGGGGGCGTGGGTTGAAAC	ATATCCTCGTACAGCGGCGCATTGGTGAGCGGGAC
GTCGCCCTCCTCGCCTGAGGGGGGCGTGGGTTGAAAC	GATGACAAGCCCAGCGACCCCTGGTTTATCCGT
GTCGCCCTCCTCGCCTGAGGGGGGCGTGGGTTGAAAC	GTTTACGACGAGCTAGACCCAGGGGGACACGATGG
GTCGCCCTCCTCGCCTGAGGGGGGCGTGGGTTGAAAC	GTCGACATGTTGGTGTGCAACTGCGACGCCACCC
GTCGCCCTCCTCGCCTGAGGGGGGAGTGCAGCGCCTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012159.1\|WP_169796683.1\|7815424_7815811_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|373064
NZ_CP012159.1\|WP_050433296.1\|7837236_7837470_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377558
NZ_CP012159.1\|WP_082362866.1\|7832051_7834043_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	cd09642_cas8c_CAS-I-C	gnl\|CDD\|378245
NZ_CP012159.1\|WP_082363531.1\|7816202_7816880_+\|HNH-endonuclease	unknown	unknown	gnl\|CDD\|372235
NZ_CP012159.1\|WP_169796684.1\|7836523_7836994_-\|GFA-family-protein	unknown	unknown	gnl\|CDD\|226314
NZ_CP012159.1\|WP_156339351.1\|7835240_7835813_+\|Dna2/Cas4-domain-containing-protein	unknown	unknown	gnl\|CDD\|366863
NZ_CP012159.1\|WP_156338906.1\|7820795_7820996_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_156338907.1\|7838177_7839806_+\|TIGR04141-family-sporadically-distributed-protein	unknown	unknown	gnl\|CDD\|275009
NZ_CP012159.1\|WP_050433282.1\|7806634_7807405_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_156338905.1\|7817575_7818403_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050433284.1\|7807813_7808431_+\|hydrolase	unknown	unknown	gnl\|CDD\|238494
NZ_CP012159.1\|WP_050433279.1\|7801049_7802519_-\|metallophosphoesterase	unknown	unknown	gnl\|CDD\|277344
NZ_CP012159.1\|WP_050436173.1\|7816929_7817388_+\|SMI1/KNR4-family-protein	unknown	unknown	gnl\|CDD\|379650
NZ_CP012159.1\|WP_050433293.1\|7829008_7831264_+\|CRISPR-associated-endonuclease-Cas3''	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|350688
NZ_CP012159.1\|WP_050433295.1\|7835719_7836376_+\|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09651_cas5_CAS-I-C	gnl\|CDD\|187534
NZ_CP012159.1\|WP_050433294.1\|7834086_7835043_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	cd09689_cas7_CAS-I-C	gnl\|CDD\|377458
NZ_CP012159.1\|WP_082362865.1\|7831395_7832055_+\|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09752_cas5_CAS-I-C	gnl\|CDD\|187534
NZ_CP012159.1\|WP_050433281.1\|7804134_7806501_+\|pyruvate,-phosphate-dikinase	unknown	unknown	gnl\|CDD\|235751
NZ_CP012159.1\|WP_050433280.1\|7802736_7803819_-\|glycoside-hydrolase-family-5-protein	unknown	unknown	gnl\|CDD\|365907
NZ_CP012159.1\|WP_082362861.1\|7808730_7815414_+\|VCBS-repeat-containing-protein	unknown	unknown	gnl\|CDD\|274730

Protein	Function_ID	Function_description	E-value
NZ_CP012159.1\|WP_169796683.1\|7815424_7815811_+\|hypothetical-protein	gnl\|CDD\|373064	pfam14430, Imm1, Immunity protein Imm1. A predicted immunity protein, with an alpha+beta fold and a conserved C-terminal tryptophan residue. The protein is present in a wide range of bacteria in polymorphic toxin systems as an immediate gene neighbor of the toxin gene.	1.33362e-16
NZ_CP012159.1\|WP_050433296.1\|7837236_7837470_+\|hypothetical-protein	gnl\|CDD\|377558	pfam05818, TraT, Enterobacterial TraT complement resistance protein. The traT gene is one of the F factor transfer genes and encodes an outer membrane protein which is involved in interactions between an Escherichia coli and its surroundings.	0.00167212
NZ_CP012159.1\|WP_082363531.1\|7816202_7816880_+\|HNH-endonuclease	gnl\|CDD\|372235	pfam12639, Colicin-DNase, DNase/tRNase domain of colicin-like bacteriocin. Colicin-like bacteriocins are complex structures with an N-terminal beta-barrel translocation domain (pfam09000), a long double-alpha-helical receptor-binding domain (pfam11570) and this C-terminal RNAse/DNase domain with endonuclease activity. Their competitor bacteriocidal action is by a process that involves binding to a surface receptor, entering the cell, and, finally, killing it. The lethal action of colicin E3 is a specific cleavage in the ribosomal decoding A site. The crystal structure of colicin E3 reveals a Y-shaped molecule with the receptor binding domain forming a 100 Angstrom long stalk and the two globular heads of the translocation domain and this catalytic domain comprising the two arms.	7.56687e-20
NZ_CP012159.1\|WP_169796684.1\|7836523_7836994_-\|GFA-family-protein	gnl\|CDD\|226314	COG3791, COG3791, Uncharacterized conserved protein [Function unknown].	1.22382e-27
NZ_CP012159.1\|WP_082362866.1\|7832051_7834043_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl\|CDD\|378245	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1). CRISPR loci appear to be mobile elements with a wide host range. This entry represents proteins that tend to be found near CRISPR repeats. The species range, so far, is exclusively bacterial and mesophilic, although CRISPR loci are particularly common among the archaea and thermophilic bacteria. Clusters of short DNA repeats with nonhomologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins.	4.4035e-156
NZ_CP012159.1\|WP_156338907.1\|7838177_7839806_+\|TIGR04141-family-sporadically-distributed-protein	gnl\|CDD\|275009	TIGR04141, conserved_hypothetical_protein, sporadically distributed protein, TIGR04141 family. This model describes a sporadically distributed conserved hypothetical protein in which complete members average over 500 amino acids in length, although matching sequences frequently are truncated or broken into tandem ORFs. Regular co-clustering with known markers of mobility (integrases, transposases, phage proteins, restriction enzymes, etc.) suggests this family also is part of the mobilome. The function is unknown.	2.22216e-165
NZ_CP012159.1\|WP_156339351.1\|7835240_7835813_+\|Dna2/Cas4-domain-containing-protein	gnl\|CDD\|366863	pfam01930, Cas_Cas4, Domain of unknown function DUF83. This domain has no known function. The domain contains three conserved cysteines at its C-terminus.	1.97418e-05
NZ_CP012159.1\|WP_050433284.1\|7807813_7808431_+\|hydrolase	gnl\|CDD\|238494	cd01012, YcaC_related, YcaC related amidohydrolases; E.coli YcaC is an homooctameric hydrolase with unknown specificity. Despite its weak sequence similarity, it is structurally related to other amidohydrolases and shares conserved active site residues with them. Multimerisation interface seems not to be conserved in all members.	7.4561e-68
NZ_CP012159.1\|WP_050433279.1\|7801049_7802519_-\|metallophosphoesterase	gnl\|CDD\|277344	cd07399, MPP_YvnB, Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	8.70281e-16
NZ_CP012159.1\|WP_050436173.1\|7816929_7817388_+\|SMI1/KNR4-family-protein	gnl\|CDD\|379650	pfam14568, SUKH_6, SMI1-KNR4 cell-wall. Members of this family are related to the SMI1/KNR4-like or SUKH superfamily of proteins.	1.10107e-20
NZ_CP012159.1\|WP_050433293.1\|7829008_7831264_+\|CRISPR-associated-endonuclease-Cas3''	gnl\|CDD\|350688	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3. CRISPR-associated (Cas) 3 is a nuclease-helicase responsible for degradation of dsDNA. The two enzymatic units of Cas3, a histidine-aspartate (HD) nuclease and a Superfamily 2 (SF2) helicase, may be expressed from separate genes as Cas3' (SF2 helicase) and Cas3'' (HD nuclease) or may be fused as a single HD-SF2 polypeptide. The nucleolytic activity of most Cas3 enzymes is transition metal ion-dependent. Cas3 is a member of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	1.00721e-51
NZ_CP012159.1\|WP_050433295.1\|7835719_7836376_+\|type-I-C-CRISPR-associated-protein-Cas5	gnl\|CDD\|187534	cd09752, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex; in subtype I-C this protein might be the endoribonuclease that generates crRNAs; also known as DevS family.	1.36723e-63
NZ_CP012159.1\|WP_050433294.1\|7834086_7835043_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl\|CDD\|377458	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7. CRISPR-associated protein Cas7 is one of the components of the type I-B cascade-like antiviral defense complex. In Haloferax volcanii, Cas5, Cas6 and Cas7 form a small complex that aids the stability of CRISPR-derived RNA.	7.91463e-140
NZ_CP012159.1\|WP_050433281.1\|7804134_7806501_+\|pyruvate,-phosphate-dikinase	gnl\|CDD\|235751	PRK06241, PRK06241, phosphoenolpyruvate synthase; Validated.	3.82481e-109
NZ_CP012159.1\|WP_082362865.1\|7831395_7832055_+\|type-I-C-CRISPR-associated-protein-Cas5	gnl\|CDD\|187534	cd09752, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex; in subtype I-C this protein might be the endoribonuclease that generates crRNAs; also known as DevS family.	2.03194e-87
NZ_CP012159.1\|WP_050433280.1\|7802736_7803819_-\|glycoside-hydrolase-family-5-protein	gnl\|CDD\|365907	pfam00150, Cellulase, Cellulase (glycosyl hydrolase family 5).	1.74073e-67
NZ_CP012159.1\|WP_082362861.1\|7808730_7815414_+\|VCBS-repeat-containing-protein	gnl\|CDD\|274730	TIGR03696, tRNA_nuclease_WapA, RHS repeat-associated core domain. This model represents a conserved unique core sequence shared by large numbers of proteins. It is occasional in the Archaea Methanosarcina barkeri) but common in bacteria and eukaryotes. Most fall into two large classes. One class consists of long proteins in which two classes of repeats are abundant: an FG-GAP repeat (pfam01839) class, and an RHS repeat (pfam05593) or YD repeat (TIGR01643). This class includes secreted bacterial insecticidal toxins and intercellular signalling proteins such as the teneurins in animals. The other class consists of uncharacterized proteins shorter than 400 amino acids, where this core domain of about 75 amino acids tends to occur in the N-terminal half. Over twenty such proteins are found in Pseudomonas putida alone; little sequence similarity or repeat structure is found among these proteins outside the region modeled by this domain.	3.67026e-20

>NZ_CP012159.1|WP_156338905.1|7817575_7818403_-|hypothetical-protein
MLNTTRLEVDRQINVGNALGPILAATRATPLQGATRTRGDAVIASTLALLNVRDVPPRAADQATDTVVAAFHRMLEAREEMLLDTLVPLGPAQREALGQVRLLRTRLFPKGTSFIRLPMEMELKHLTDLRQRLGEPEVDAAVTALGLAAEVLHVLAHVERYGRSLGQDAGGAGRATELASLAWHEAFVRFAAQVVIDYEGNTAMQRELLGPYEGQRLQQRAAARAARRARAAAQGSSTPPLGSSPAKGLERGLEVDEALDEEPPSMTGGATPAAG
>NZ_CP012159.1|WP_050436173.1|7816929_7817388_+|SMI1/KNR4-family-protein
MSGPVVTTELLRQAEARLGLRLPRAYVEILRQKNGGVPARRCFHTDTPTSWASNHIAISSLLGIGFEQGVDGEFGSAYLVQEWGYPDIGLVICDTPSGGHDTVMLDYRKCGAEGEPQVAYIDEDRSILTIAADFASFVQCLVDCSTLLPPSS
>NZ_CP012159.1|WP_082363531.1|7816202_7816880_+|HNH-endonuclease
MDGVRIGMARMLLESAKLGILGGTSRVYVAYTTITAAWNGYKESGLPGALDAVNPASHMVEAGVEASEAAAAEDWEAAGASLFKAGSIGMSILATAVGVGGAITATVGSTAGSAGRAAAAAGRRSGATPVRNAHLANQAHPKTGVPFDRNGYPDFSAFRHPTIGDVRIELSGSRSTDFARANTAAGVTETPAGYTWHHHQDRGLMQLVETNVHKYTGHSGGFSTR
>NZ_CP012159.1|WP_169796683.1|7815424_7815811_+|hypothetical-protein
MFTIEINQHRQHAASLDDVDRILDELHAASASLGPQLVSVEICESGDSLAIGLGLARSVLNYMSGSKEPPYFTSTGELDVDEPIAFRFGGEWSEFPLRNSIPTSIARQVMRDFCVTGKLSRNIQWEQD
>NZ_CP012159.1|WP_082362861.1|7808730_7815414_+|VCBS-repeat-containing-protein
MSMSASRSQPAFPFVSASSPRPRRRPPFPRALLLLIAVLLVGACGDAGGPLLWSSSSQALWEPSPIPPLPPLLCLGPGDGPSPFPPDLTQGTTTAAGTLPGSFSVTSTGEATYTIPVPTLPGRAGIEPSLAITYDSAQGEGLLGIGFHLQGLSSVDRCPRNVAQDGHIAPVRDAEDDALCLDGQRLVPVDPQPGRAPREYRTFPDSFTRVEADFAESEGWPAERGPKRLRAHGKAGLIYEYGGESSGRVLAQGEAVRSWLLTRLSDRDGNTMAVVYRNDLHAKGYTVEHAPQRITYTRHPTVPASRMVEFTYGPLEAADVRVHYARGMELRRSLSLRSIQMFGPGHVLARELRFGYGHGPATGRLRLEAVRECAGDGTCKPPTRFTWHTAGAAGYTQQQTLVEVPLSERGTLMTMDVSGDGLDDLVTSDMVVEAGTEEPITRWSVALNRSQELTPGFFEAAVTGQEQPHFIDAEPPYQPELGTPLDYDHDGRMDLFLHDVHGQSMTWEVLLSNGDGRFTRRDTGVPRPFTMGMTPAGLRSPDASTHLVDVDGDGMVDLLQCYLSAHEQLWYLHRWTAAAGGFAPHGDRVHALSSYPCHAELHAVDVDADGRVDLVMQELILVGSQVRAGWQYVAFSYELSDGSWTRALTGLRLTPPGDRVFFLDVNGDGLPDAVQSSRDDEQLYTSMNIGAGFAAPVPSLATPTLGAARFVRFASVLDHNADGRQDLLLAMSDGGSESLPAWKVLQATGEVGPGTFEIVHPGLPMGIVLQQDELPTPDHPLTPRVTDVNGDGAQDLLYAFNNQVHVFENVLGQEDLLAAVTDGMNAHAPEDAEYLPNVQIRYDHLIDRARTTEGFEDAPGIPSPEQRTYRPLEQSDEEPCRYPVRCVVGHRRVVSGYVLNNGADRPRTFQVAYRNGRHHRLGRGFLGFGTRIVRDLDTGAGTAEFYDNVTFDGAFQAFPFRGQVQRSWRWSPSLPLDAHSAEPASLELLTTRSYAVVIPTQAGTYFTLSLLEGKSRHQGTFSPGSGKTLEEAVRALEGDLASRMSDTLRTVSDFDLYGNILAEQTQTEGVDLDLSVTRSFDNDPLSWRLGELTRETTCSKAGGETQCRVMHRSYDGRGHVRLERVGGEPFDPEMQLDVWFSRDALGNIHSTRSRDGTGQVRASCTSYDALGLMPYAHRNLEGHQSYTRYDPAVGVLRASVDPNGLVSRWAYDGFGRVTLESLPGRMPTVIRRTWTKDGGAAGNAWNLKIRTASVGGQDETVQLDGLGREVRWWWQALDVGEEQAPRMMQEVAFDARGEHLAWRSLPIVDPAPPGSVQVRETWQYDGMGRVLRHVTPWGAATTHEYIGRDEVITAPGQAVTRIASDPLGRPTAVGDPEGGVSRYTYGPFGGLREVTTPAGAVTLTERDAFGRVRRQVSPDRGVSTAHYDGYGQKISSLDAAGRAVTTRYDTLGRIFRQVDEDGVTEFRWDDAQHGVGQLALVVSPDGHRLRYGFDHLGRPATTTLEIGGESFTSRLSYDLSGRLERIEYPSAPGIGSFAIEREYDPHGRLRALKDAGSGAEFWRATAIDAGNRITGERFGGGTATTLRTFDAARERVSRIETQTAGGPVQQLSYLWNDRRKLVERSDGLHANVERFRYDLLDRLTCAQFGLINAALCERPFTYGPDGNLLQKPGVGAYEYDPAQPHAVVRAGSAFYGYDAVGNQTSRPGATIAYTAFDLPKRIALTSGDTVDFAYDGLQQRVRKTTATQEIASFGEVYERVTDVVTGAVEHRYHVRNDERVVTLVRRSVAQGTRTLHVHVDHLGSIDVLTDGVTGSVAERRSYDAFGAPRHPDWGSGQPPSPHELSSLGFTGHEADLDLGLVNMKGRIYDPKLGRFLTPDPLVPRPLFGQSWNSYSYVLNSPLSLVDPSGFQEQPPATEDGCSQGCTIWVFGPPREPKPPAPPKVVEGNLEDAAGTGSTQAPVDVGTSGVRSGWSPQLPATLQTLGRGDAIARRIMDGVRIGMARMLLESAKLGILGGTSRVYVAYTNLTAAWNGYKESGLPGALDAVNPASQMVQAGVEAYEAAAAEDWEAAGASLFKAGSIGMSILATAVGVGGAITATVGSTAGAAGRAAARAPSLPAYAGGKTSGVLRTTAGDTALLSGYKGPSASMPRGTPGMNGRIKSHVEAHAAAVMREQGMKEGTLYINRVPCSGATGCDAMLPRMLPPDAHLRVVGPNGYDQVFVGLPD
>NZ_CP012159.1|WP_050433284.1|7807813_7808431_+|hydrolase
MADLYARLRKEDAAVLLVDHQAGLMSLVRDFHPDEFKNNVLALADLSKYFGLPTILTTSFETGPNGPLFPELIEMFPDAPYIARPGQINAWDNEDFVKAVKATGKKQLIIAGIVTDVCVAFPALSAIKEGFEVFAVVDASGTFNPTVREAAHQRMAAAGVQLMNWFSVACELHRDWRNDIEGLAGVFSRHIPDYRNLITSYSAKK
>NZ_CP012159.1|WP_050433282.1|7806634_7807405_+|hypothetical-protein
MKRLLSTTFALLCLGTAATAAAQTSTQPTLTFHDDWTVEQEGQPSTDTPLRIRYDLDRLAQCRGPSWTITGYMMSNRGPVSSFTVASPWTTGPTAELNLAVSRGGNLELWFQVTDANGCSAWDSDHNWNFHTWVTHDPTVTFSADWSETLTGTLQAGSTLMVDYDIGRLPLCRAYYLNYVAWSVSLNYRFDGGEIFTAPLTTTWGEWNLQYWRQIPAFINIPPGVSQVEMWFSNTDRKACQEYDSDYGQNYIYQVQ
>NZ_CP012159.1|WP_050433281.1|7804134_7806501_+|pyruvate,-phosphate-dikinase
MAPPICFFRDLTTALSPLAGGKGSTLARLSRAGYPIPDGFIVLTRAFDGDALTPTARSRLRPALAFLRANQRDCAFAVRSSAVNEDSAQASFAGALDTVLDVRDDDAVADAIETVRRSRHHERVAAYSQAQGLPAQQDVAVVVQRLVRPQIAGVLFTADPVTGSRDTLVGNYVHGFGEPLVAGEATALAFTLTRPHGDYTGPEALRPHARELHRLGTRLEDELAAPQDIEWALVDDQLTLLQARPITTLRAHDPITGVWNDSLTGDYLWTSTNLGEAVPDVMTPCTWSLLQIFLADTLPILHFRGLTPAGNIGGRPYLNLSVAATLSHAFGISPRRFSALASLVFGRLPPGVEIPLLPIPRWPILRALLPEVVRLQRRVREHHRLLPAFVAEGPARCDDLRARIQDTTRPADLLTLWSDDLLPYFRLCSRMLEAGARHESKQSMALRLALRALVGEADTNALLSNLGAHDSPLESLGPLVSLTQLTRGTIDRARYARRHGHRGPHEFEVSLPRPAEDPRFIDRQLDALRDAPLDVDVLLARQAQAHADAWTRLEQRHPHLAAPLRHRLDRAARGARDRELARSEAVRVFWPLRTFVLRAGELTAHGDDLFFLSIDEILALLRGDLTPLARIPPRRDAHARQSALPPYPPLVRGRFDPFQWAADPRRRNDLFDARGDLTPPPHAITGFPGAAGIVEGHARVLTTHDDAHLLQRGEILVTPVTNIGWTPLFPRAAAIVTDVGAPLSHAAIVARELGIPAVVGCGNATTRLRTGDRIRVNGAQGTVERLDP
>NZ_CP012159.1|WP_050433280.1|7802736_7803819_-|glycoside-hydrolase-family-5-protein
MALLGALAALVTGCGGAEDDGTAPHGNMTTGTTSTSGTSTSSTDPDPETPVDPPVQPEGSVVGRHGWLSVAGNRLEDEHGEAVQLRGMSLFWSQWAQNFYNASIVDTLVDDWKATVVRAALGVEPDGYLVNPDAEKARVKVVVDAAIARGVYVIIDWHDHSASQHTAQARSFFTEMAETYGQTPNVIFEIFNEPDGEPWSEVKAYAEDVLGAIRQTGARNVVVVGTPTWSQDVDVAADNPVVGFDNVAYTLHFYAGTHRQFLRDKATTAMNKGLALFVTEWGTCEASGNGGIDLEESQRWLDFMDTHKLSWANWSLFDKEEAASALRPGASPTGGWEESALTDAGKWVREKIRAGASNAP
>NZ_CP012159.1|WP_050433279.1|7801049_7802519_-|metallophosphoesterase
MKIFKFVALLAGSFALAACVGGEVEQEGVIEEAVEVASEAVSACAEMPAPVHHRVKPNGGASLYTLNANEAANAATNHGFTDDRGIAFYGAASTGTGLSPVYRLYNPTLGNFLWTIDENERDKAKTQYGYTSDEGIRFYASKTSRPCLIPVYRYRSPTLNKHRFATSAADRASLSASGWLDEGVKFYAAPEATVTPPDDDTKFTFVVIPDTQQEIVYAPTRFTHRLDWIVANRASLDVRFVAHSGDMVDWDTPDHIHYVRASDALVKLDTAQIPYAIAIGNHDTAAVCQGGSACPGNVNANLRNTTTFNTYFPTSRFSALSGVYEAGKIDNSYHRFTAGGSSWMVLSLELWARTGAVDWAKTVLAQHPNDNVIVITHSHLNSNGTIMQTNGGYGNNSPQYVFDNLIKQYANVRLVFSGHVGNAAYRLDTGVHGNQIHQFLNCFHDGSTNPTRLVEIDTAANTLSTRVYAPATNTERSDGKHTLSNMNWL
>NZ_CP012159.1|WP_156338906.1|7820795_7820996_+|hypothetical-protein
MPWKRCISGWSGGQLVTSAALNMQRSNPGGGSGLQSSAWSLHSSRFSKVEQAMANLSQEKVACFFT
>NZ_CP012159.1|WP_050433293.1|7829008_7831264_+|CRISPR-associated-endonuclease-Cas3''
MIPHPETDPPAPPAALTRAPLAHLDETGRPHLLVEHLEAVGALAAEFAARFGTADIARCAGQWHDLGKYAADFQGMIRAANGFEAHLEGTPGGRIDHSSAGAVHAVKVLGSVGQAIAFAIAGHHAGLPNAAALKERLQTKMPRYEAAKSGGIDERLLSAALLDFPAWLKEGRPSDRMRRLELWIRMVFSTLCDADFLDTEAFFRADRAALRGDAPAIEVLNGRLRDHLGGLQAGARSSEVNRVRAEVLAACVAAAGRKPGAFSLTVPTGGGKTLASMAFALEHAARHGLDRVVVAIPFTSIIEQTAKVLRDALGDEAVIEHHSALDPEEETPKGRVACENWDAPVVVTTTVQLFESLFAARPSACRKLHRLARSVIVLDEAQTMPVGMLAPILDGLRSLVGEYGASVVVSTATQPALGRAQGLSVGFEAVEEIVPASVRAFERLRRVEVRWPEEEAPTSYAALAQAVASERDVMAIVHLRRDARVLCEALDAVLGHEETLHLSALMCPAHRSEVLAEIKTRKGRGEPVRLVATQLVEAGVDLDFAVVYRALGGVDALAQAAGRCNREGLLEGRGELRVFHAPTAPPKGVPQAALAITRGLLREDPGLDLFAPATQQAYFQQLYGSRNLDAKEIQAAREGLRFKDVAEGFQIIEDEWSAPVVVPYDGRAQACLRELEALGPSRKRLRVLQRYTVTVPRKARERWERLGLAREVAGAVVVLEGAFAAAYDPRRFGLVPERVGAADAGALVIEG
>NZ_CP012159.1|WP_082362865.1|7831395_7832055_+|type-I-C-CRISPR-associated-protein-Cas5
MQSKRFKIRAFGPMACFTRPEMKVERVSYEVMTPSAARGLVEAILWKPAIRWHIHEIAVLNPVKWVSFRRNEVTDRASPRVLDYCADEPSRRAQRNTVALRDVDYVITASFAMTERAGPDDNVVKFEQMFARRLEKGQCFHAPSLGCRELAASVEPAPEAVTPIDAAVDRPLGMMFYDFDYRGGRAARPLFFEARLSGGVLHVPGWEQVLRENAAGGAA
>NZ_CP012159.1|WP_082362866.1|7832051_7834043_+|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MMLRSLYALAQRVEGLIEDPHYEKKRIDFFLHVNDQGDFVSLIPTEEGGRALERMVPRMPKRTVNVAPGFLFDNAKYVLGLGGNEKDPLKAKRNAERNEECAEAFQQVVDEVASALREPGLLAVSHFLARRREQLPKVLKERPASTWTGSEQIAFVRAANGEVVHDLPAVRALWAARREREASEGAVEVRCLVTGAMAPPARMHGSVKRVPGAQTSGAALVSFNAEAFTSQGLVQGENAPVSRAAADGYVTALNYLLEGTPERRFRYGVPVGADAVTVFWTREQHEVVDVFADLFAPTTESAVRLAEAPLRGLSPAELDATPFYAATLSGNAARVVVRDWMETTVAEVKRNVGQYFDDLHLGNAEPVPVGIKALCDCIEAPGGRGLRPDLAARLFRAALRGEPFPRELLSAALHRLRLPPDKQWEARLLRLRCALIKATLLRLPRSGLPALEVSVSLDERSTQVPYLLGRLFAVLERLQGAALGDINATIRDRYFGAASATPALVFPRLLKLSVHHSAKAEGNGGWLERLKSRIMDGLPAERFPRTMLLEDQGLFAVGYYHQRERFFTPRQPTEAQLPAEATGDHGAASATSTESAERAASATSTESAERAASAERAETPATMASSAAPNSTATSGSALTNSALTKASTTAPAAERPSRKRTT
>NZ_CP012159.1|WP_050433294.1|7834086_7835043_+|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MTQLRHRYDFVLLFDVKDGNPNGDPDAGNLPRVDPETGQGLVSDVCLKRKVRNYISLSRAGASGYDIYVKEKAVLSAQQGLAYAALNLKSASTSEGDEAAEAEEPSAKGGKKGKAKPESTSKASDREAVDRARDWMCRHFFDIRTFGAVMGLKENNCGQVRGPVQITFARSIDPILTQEHSITRMAVATQREADAQGGDNRTMGRKNTVPYGLYRAHGFISPQLARQTRFEEPDLDVLWESFRQMFEHDRSAARGMMSLRDLIVFRHESELGNAPAHRLFDRVLVERRDKNLPARDFADYAVRVEEAPSGVTVLRPAA
>NZ_CP012159.1|WP_156339351.1|7835240_7835813_+|Dna2/Cas4-domain-containing-protein
MSEADALVPLSGLQHVVFCERQAALIHGEQRWREDAATAAGRVLHERADLPGGERRRGVWIETRSARHLLERSRGRPPRLRGCGLTWRQGRRVQRQERSTFTPDEETRPERVALAGLGTLVREGRAQGGGARHTGGRTQMARTPAEGGAQGAGNGVRREGCRASRSRSGRSGPWPASRGPRRRSTARATR
>NZ_CP012159.1|WP_050433295.1|7835719_7836376_+|type-I-C-CRISPR-associated-protein-Cas5
MQSKPFKIRAFGPLACFTRPETSVDRESYEVMTPSAARKLFEAILWKPAIRWHVHEIAVLKPVTWVSFRNDEMPGQAAPRGGGDFDGEASRRAQGNTVALRDVDYVITASFVMTDQAKPTDKVAKFERMFAQRMAKGQRHYAPSLGEREFLASVQAAPEEVTPIEAGVDRALGRMFYDVEHRTGHRVRPFFFEARLTGGVLHVPSWEEVLREHAAAGG
>NZ_CP012159.1|WP_169796684.1|7836523_7836994_-|GFA-family-protein
MAAYLGAQPSPQEQCIVIEGGCSCGAIRYRIDGSLQHARACHCSRCRKIFSGASSAYAEVAPGSNFTWLTGADRLTKHGTGDGWGLAFCSVCGSTLCGMAGESVHGVTLGSVDGDPGVQLEMHIFVGSKAPWDHIGGDAPRFDEGPPSDPTSSSAA
>NZ_CP012159.1|WP_050433296.1|7837236_7837470_+|hypothetical-protein
MKNQKSTRKARPSRPPEPPQTKDDQAPEKARQEESELGGAARGAAIGGWVGGAGGAVVGGAFGLIQGALGDEKDSIL
>NZ_CP012159.1|WP_156338907.1|7838177_7839806_+|TIGR04141-family-sporadically-distributed-protein
MPTGGVATGTRAYLPGEAFMPRSSIKTATLPIYLLKERFRSGEAALRRTGMSRDVIPDIGTLYTDSHHPYPPGWLSFFEGTVAPNPKLLNASTGGVLFVEVRGRLFAITFGRGRGLLAKDCWEEGFGLRVTLNSIDAAKIKSIDHKTFEAITRHSRTQTSREGSTEDFGLDIERDLVRAVTGEPKIETLGRRLTGMDSLVVTGKFGLKSVPALLEHTLDRHALDDYKENFGWIDNISEVRDGQRRDELDAKLVARLKRKDVNRLWLSPPDILDWSYVGGFKYKPSEKETHSDLSVADFLESVRDPGALHPGFLRSRRILAVDADGEQFIEEWPVYQCIYCEEDIGSDTYLLSTGKWYRIEKDFANEVNRDIKGLASTRTPLPPYKRTDTDEATYNERVARQSSGALALMDRKIIHHGGKRSSIEFCDLFSSAREIICVKRYEGSSAPLSHLFFQALASAELWRRDAEFRKKVNRLLPRSHKISDSAKVPDATQYPIVFAIVSHQAGPILETLPFFSRLALRNIAKRLALMGYPVSVLKIDRQ

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Crispr_ID: NZ_CP012159_36

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012159_36

7912303-7912486

Orphan

Consensus_repeat	Method
CCGACACCCCCGGCCATCGCGACCGACACC	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP012159_36

>merge|NZ_CP012159|36|7912303-7912486|CRISPRCasFinder
CCGACACCCCCGGCCATCGCGACCGACACCCCCGGCCATCGCGACCGACACCCCCGGCCATCGCAACCGACACCCTCGGCCATCGCGACCGACACCTTTGAGGGTCGTCGCCAACACCCGGAGGGCTCGGGGCCAAGACGGCCGGGGGTCGTCGCCGACACCCCACGAACTCGGGGCTGACACC

>NZ_CP012159|36|30|7912303-7912486|CRISPRCasFinder
CCGACACCCCCGGCCATCGCGACCGACACC	CCCGGCCATCGCGACCGACACCCCCGGCCATCGCAA
CCGACACCCTCGGCCATCGCGACCGACACC	TTTGAGGGTCGTCGCCAACACCCGGAGGGCTCGGGGCCAAGACGGCCGGGGGTCGTCG
CCGACACCCCACGAACTCGGGGCTGACACC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012159.1\|WP_156338917.1\|7909012_7909447_+\|DUF1036-domain-containing-protein	unknown	unknown	gnl\|CDD\|368825
NZ_CP012159.1\|WP_050433332.1\|7900080_7900731_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050433338.1\|7909489_7910716_-\|AgmX/PglI-C-terminal-domain-containing-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050433333.1\|7901192_7902482_+\|serine-hydrolase	unknown	unknown	gnl\|CDD\|365903
NZ_CP012159.1\|WP_156338919.1\|7914715_7916863_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|271322
NZ_CP012159.1\|WP_050433335.1\|7905891_7906749_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050433344.1\|7917650_7919126_-\|VWA-domain-containing-protein	unknown	unknown	gnl\|CDD\|238742
NZ_CP012159.1\|WP_050433334.1\|7902534_7904043_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|283275
NZ_CP012159.1\|WP_169796692.1\|7922123_7926854_-\|protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP012159.1\|WP_050433340.1\|7911191_7911755_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050433346.1\|7920726_7922127_-\|sigma-54-interacting-transcriptional-regulator	unknown	unknown	gnl\|CDD\|226350
NZ_CP012159.1\|WP_050433331.1\|7896854_7899623_-\|beta-propeller-fold-lactonase-family-protein	unknown	unknown	gnl\|CDD\|225926
NZ_CP012159.1\|WP_050433348.1\|7928273_7929038_+\|N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl\|CDD\|119407
NZ_CP012159.1\|WP_082362879.1\|7912860_7914228_-\|CapA-family-protein	unknown	unknown	gnl\|CDD\|378215
NZ_CP012159.1\|WP_050433349.1\|7933183_7933975_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
NZ_CP012159.1\|WP_082362878.1\|7906892_7908476_+\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|236846
NZ_CP012159.1\|WP_050436181.1\|7904135_7905695_-\|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|183775
NZ_CP012159.1\|WP_050433343.1\|7916978_7917608_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_156338920.1\|7927569_7928277_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050433345.1\|7919478_7920573_-\|DUF4325-domain-containing-protein	unknown	unknown	gnl\|CDD\|379507

Protein	Function_ID	Function_description	E-value
NZ_CP012159.1\|WP_156338917.1\|7909012_7909447_+\|DUF1036-domain-containing-protein	gnl\|CDD\|368825	pfam06282, DUF1036, Protein of unknown function (DUF1036). This family consists of several hypothetical bacterial proteins of unknown function.	3.87412e-20
NZ_CP012159.1\|WP_050433345.1\|7919478_7920573_-\|DUF4325-domain-containing-protein	gnl\|CDD\|379507	pfam14213, DUF4325, STAS-like domain of unknown function (DUF4325). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria, archaea, eukaryotes and viruses. Proteins in this family are typically between 99 and 341 amino acids in length. This domain is distantly related to the STAS domain.	5.57597e-09
NZ_CP012159.1\|WP_156338919.1\|7914715_7916863_+\|hypothetical-protein	gnl\|CDD\|271322	cd14952, NHL_PKND_like, NHL repeat domain of the protein kinase PknD. PknD is a mycobacterial transmembrane protein with a cytosolic kinase domain and an extracellular sensor domain that contains NHL repeats. It plays a key role in the development of central nervous system tuberculosis, by mediating the invasion of host brain endothelia. The NHL (NCL-1, HT2A and LIN-41) repeat is found in multiple tandem copies, typically as 6 instances. It is about 40 residues long and resembles the WD repeat and other beta-propeller structures.	8.12453e-06
NZ_CP012159.1\|WP_050433344.1\|7917650_7919126_-\|VWA-domain-containing-protein	gnl\|CDD\|238742	cd01465, vWA_subgroup, VWA subgroup: Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A domains. Not much is known about the function of the VWA domain in these proteins. The members do have a conserved MIDAS motif. The biochemical function however is not known.	6.86836e-33
NZ_CP012159.1\|WP_050433334.1\|7902534_7904043_-\|hypothetical-protein	gnl\|CDD\|283275	pfam05576, Peptidase_S37, PS-10 peptidase S37. These serine proteases have been found in Streptomyces species.	6.45774e-111
NZ_CP012159.1\|WP_169796692.1\|7922123_7926854_-\|protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	2.19561e-86
NZ_CP012159.1\|WP_050433348.1\|7928273_7929038_+\|N-acetylmuramoyl-L-alanine-amidase	gnl\|CDD\|119407	cd02696, MurNAc-LAA, N-acetylmuramoyl-L-alanine amidase or MurNAc-LAA (also known as peptidoglycan aminohydrolase, NAMLA amidase, NAMLAA, Amidase 3, and peptidoglycan amidase; EC 3.5.1.28) is an autolysin that hydrolyzes the amide bond between N-acetylmuramoyl and L-amino acids in certain cell wall glycopeptides. These proteins are Zn-dependent peptidases with highly conserved residues involved in cation co-ordination. MurNAc-LAA in this family is one of several peptidoglycan hydrolases (PGHs) found in bacterial and bacteriophage or prophage genomes that are involved in the degradation of the peptidoglycan. In Escherichia coli, there are five MurNAc-LAAs present: AmiA, AmiB, AmiC and AmiD that are periplasmic, and AmpD that is cytoplasmic. Three of these (AmiA, AmiB and AmiC) belong to this family, the other two (AmiD and AmpD) do not. E. coli AmiA, AmiB and AmiC play an important role in cleaving the septum to release daughter cells after cell division. In general, bacterial MurNAc-LAAs are members of the bacterial autolytic system and carry a signal peptide in their N-termini that allows their transport across the cytoplasmic membrane. However, the bacteriophage MurNAc-LAAs are endolysins since these phage-encoded enzymes break down bacterial peptidoglycan at the terminal stage of the phage reproduction cycle. As opposed to autolysins, almost all endolysins have no signal peptides and their translocation through the cytoplasmic membrane is thought to proceed with the help of phage-encoded holin proteins. The amidase catalytic module is fused to another functional module (cell wall binding module or CWBM) either at the N- or C-terminus, which is responsible for high affinity binding of the protein to the cell wall.	1.39748e-32
NZ_CP012159.1\|WP_050433346.1\|7920726_7922127_-\|sigma-54-interacting-transcriptional-regulator	gnl\|CDD\|226350	COG3829, RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms].	4.88094e-93
NZ_CP012159.1\|WP_050433331.1\|7896854_7899623_-\|beta-propeller-fold-lactonase-family-protein	gnl\|CDD\|225926	COG3391, COG3391, Uncharacterized conserved protein [Function unknown].	3.13285e-07
NZ_CP012159.1\|WP_082362879.1\|7912860_7914228_-\|CapA-family-protein	gnl\|CDD\|378215	pfam09587, PGA_cap, Bacterial capsule synthesis protein PGA_cap. This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein.	1.23903e-80
NZ_CP012159.1\|WP_050433349.1\|7933183_7933975_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	0.00283975
NZ_CP012159.1\|WP_082362878.1\|7906892_7908476_+\|HAMP-domain-containing-protein	gnl\|CDD\|236846	PRK11100, PRK11100, sensory histidine kinase CreC; Provisional.	9.41439e-66
NZ_CP012159.1\|WP_050436181.1\|7904135_7905695_-\|SDR-family-NAD(P)-dependent-oxidoreductase	gnl\|CDD\|183775	PRK12826, PRK12826, SDR family oxidoreductase.	4.76294e-11
NZ_CP012159.1\|WP_050433333.1\|7901192_7902482_+\|serine-hydrolase	gnl\|CDD\|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	1.35578e-55

>NZ_CP012159.1|WP_050433340.1|7911191_7911755_-|hypothetical-protein
MQPDPGEMHIDASSVVLKFVDDADLPRMLKLRDKVDKAMDNILVLTPAQIAQAGLNVDDMDRLRANISDYRKVSMFLAAARQMAENLQQTSFCLGHEIAAQIGEISSQARRRARVSPARGEILNALTHLIDYQVAPAKKGLATKAKAKKSSEQGAGQAAVVAPIAKAAVRAEEVAEQEEAGPASVAS
>NZ_CP012159.1|WP_050433338.1|7909489_7910716_-|AgmX/PglI-C-terminal-domain-containing-protein
MAVMRGINALLAGALLAACGGSEGPLPASTMPQPQGGATSPPLAAGAPQQAARPPKDGPRLQLDGQSLRLDGVVVAPVTALQSDEFEPIEELLGPLRARPRSTVAGGGTEPCVVEVAAEVPFQSVTSVLQTCGMAGHPEALLHVGPGWIQVRTPVIGNPSDPTDPKEMLGAPSRRQLVLHAGRDRLGIQFGDVSPPKAGSMHWQLASVLDRSVTRSPSGTPSEGEVLGTALAEACQGLSRPCLSGMRFTEDRGLRFGDMASVLSIVGGVQGTPGGVPEIVVSFSERLGPVLRTRTARRLRPEVIQGVVRGHFERFRACYEAGLLRDATLTGRVTVLFRIDEGGHVVEASDEPVPAIPGQAAAPAMKDKDQEVVSCVLAEFEKLSFPEQDFGLVTVVYPIVFSPEATSP
>NZ_CP012159.1|WP_156338917.1|7909012_7909447_+|DUF1036-domain-containing-protein
MKHAMLGIASALMLLAWSAAAHADIRICNHAGEKIWVAMAAYQSGRWISSGWYGHENGTCRTLVKGRPTNTRYYFHVQGESGKRWGGPNRFCVEPNDAFTIERAEEISWCEPRPFFCRWTADGPREEIVVTPGYAGLHESRCDI
>NZ_CP012159.1|WP_082362878.1|7906892_7908476_+|HAMP-domain-containing-protein
MPQGACPAATKAHLFEGGALRSVFRELGRIRVRLLVVNVVVLLVPVVGLEFARIHERQLLEALERDMRNQASLVRAFVERDLTDQVDLGDPRHANILTTAAARTRTRIRLIDATGAVLADSHEHGPPEGPEPPPPSLVPRSIRENSGFTRDYNLSRGPKTWPEIPDRPEVRKALEGHPASMTRIRDRHPDVLLFITEPIRNRGRVVGAAYLVRSTQPVLVELHRIRTGLVRVLAVALLITGTATLLLAWSISRPLGRLSRAARRVAEGEPDVSIPVSGGGEIEELGASFARMKDQLDARLRFIQDFAADVAHEFKSPLTSLRGAAELLEEGADDDPEARRRFLRNITLDVERLDRLVSRLLELSRIEASREPMTDIDLPALLQRVVDRASTPDQPVVLHPARISRRLLARATDLEAALLNLAENAVRFSPTGQPVEITVRDHDPTASIHIVVEDHGPGIPPTNLARIFDRFFTTDEARDGTGLGLAIVQSVAQAHGGRVHVESRWTGDVPEGAPTGATFTLELPTQR
>NZ_CP012159.1|WP_050433335.1|7905891_7906749_-|hypothetical-protein
MTLRTILPRSFAKQFVAALSFGALLAACAGDLPAGLTDEDPEEGGGGSPTTTTTTTTTTGGGTGGEGGSEAVREATYSVRLGTPVHEVELQAETDTTVIVTPNGFVGSVTLGVTGLAGGDVGTTWSNATVTLDGSTEVEVTLTLNTFSNSTVGTSLGKVTATSDVGVNDADLTIEILPQITIVIPPNVASRVNTTDSFGAYPTRIKALSNLSADNPINVRFYNQDGVPREIHADNPNQGFAHTGAAIQPGAYDARTRPVNVAGTYNFYMHGIANGESIRGRIVVE
>NZ_CP012159.1|WP_050436181.1|7904135_7905695_-|SDR-family-NAD(P)-dependent-oxidoreductase
MTSEALPAPPTPHEVETCVRVLESLGAQRALLAELDLTFRRRLLMAAGKLSRPERAEQRELAKAFRRREHGQRKAADAALLDATGIRAARREPVFVTPLQMTAPPRVEPAASPPEAPEEALQNERKCYVCKAPFRAVHFFYDAMCGRCGDLNFEKRNQSAPLDGRVALVTGARVKIGYQAAIKLLRAGARVIVSTRFPHDAARRYAEEADFEAWSGRLHIYGLDLRHAPSVELFARHLDQSLDRLDFVLNNACQTVRRPPAYYEHLVSLEQAALEALPEGARPLVAAYDALRSQGGSGGAPARRAAGLLEPAALSQIRTAADGPLAWALSSDTEAPPPDALFPRGRYDADQQQIDLRGVNSWRLTLGEVTTVEMLEVQLVNAVAPFILNARLKPLMLRHRTGDKHIVNVSAMEGQFYRAFKTDKHPHTNMAKAALNMMTRTSAPDYVKDGIHMNSVDTGWVTDEDPAAIAARKVEEHGFHPPLDIVDGAARICDPIFSGLLTGQHLWGQFLKDYAPTDW
>NZ_CP012159.1|WP_050433334.1|7902534_7904043_-|hypothetical-protein
MRIYGRTIFTLVLSSLALVACGGDDDGNPNKSNEGGGGSCGTDCNAGGAGGAGGDGGDGGNGGGGAGPQADILERLSGLHGVEVVEATSSVDGYRYFELSILQPMDHGNPNGQAFQQRIQLHHRDDAAPTVLATTGYMLFGGQYLEEPTALLEANQLYVEHRYFDPSRPSPADWSLLNIEQAAADHHRIVELIRPLYSGAWISTGASKGGMTSVYHRRFYPDDVDGTVAYVAPLSFGLSDARYGEFLAQVGDDPACRQRLKDFQREVLLRRSVMLDRMADLVVQGYSFDTMGIEAAVEAAVIDLPFAFWQYSGASDCGDIPTAAASDDEIWQYLEAVGMVAFYDDSSVLSFEPYYWQAFTELGAPGTDESHIADLLTIDLDAIDSLPSIDAAPVFNPAAMQDIDTWVKGQGQRILFIYGETDPWTAGAFALGGAEDSYLFTARGANHYASISSLEDADRGVALTRLAAWAGVSTPQPLVHGAPRLVSPSPTTLRLFRRALSR
>NZ_CP012159.1|WP_050433333.1|7901192_7902482_+|serine-hydrolase
MRTERTVRRRDLLRWAGPAAAALAVTPAILALPGQQGGHPAPTLAPGLPEYVGMSAARLEDVFARIARRVEDGLFPGATALIARKGMIVGHRAFGTKVRDHETEPVTLDTIFDVQSMTKVLATAIAALVLVDDGDLSLHEPASTWLPEMAVNGKADLTIHDMLRYSAGLPVDNQHLDETNLALVWQRMAETPLDYAPGTQVLYSDVTYRLLGKVIEAAAGMPLDAFVRMAVWGPLGMTNTMFRPAPALRHRIAATGYSERRGYLVRGEVQDEQDFALGGVVGCDGAFSTALDLAVFCQMLLNKGVYGDTRILSRHLARAMVKDQTPQVDEAVANQSPLNDLLVGPKSYGWEIWSPRFSTGGMRLSPKSYGKVGGAGTFMWVDPAREIIGVLLTNHGLPNPFSGKNWNLLLDAVGCTEFYDGIIAAVDVE
>NZ_CP012159.1|WP_050433332.1|7900080_7900731_+|hypothetical-protein
MSRPVRARNLARALGIEEDDLLLWLEESAPIPTGWHPASFVPVDIATRAQHRFAPPPSPPPLPLEPRCAACLDAPTTPGTRPVLAVAGTACAVCDGSVNKRAALALIAAFNDHHVVRLLVVGGGPGTAEELRALLSGHIEIRIVDGESYRNTTQAEAELRWADVVAVWSSTILPHKISKLYTDTREFRDKLVTVPRRGVAALCHLVTDRVNTWPRP
>NZ_CP012159.1|WP_050433331.1|7896854_7899623_-|beta-propeller-fold-lactonase-family-protein
MSSSNPARCAGTIAAVCLAGMAVSVESSASSYTLFESGQVRPLVLSADGKRLFAANTPDGRVEVFHVGPLGLTHLTSIPVGMEPVALALRDERELWVVNHLSDSVSVVQLSATRLGGRVTRTLLVGDEPRDIVFAGPSRRRAFITTAHRGQNNPNDPQLTTPGVGRADVWVFDADNLGASLGGTPLSIVTLFTDTPRALAVSPNGQRVYAAGFHSGNRTTTVFEPLIPDGFGIDGVPGPATNVEGLPAPEVGLILQFDGSNWVDTLGRTWDDLVKFNLPDKDVFVIDAMANPPAQVAGAGGFFTGVGTILYNMAVNPVSGKVYVSNTEALNLDRFEGPGIYAGETLRGHLHESRISVLTPGAGSVTPRHLNKHIDYDTCCAPLPNGENAKSLALPQSMVISPDGSTLYVAALGSSKVGVFSTSQLEGDTFVPSTTNQIQVSGGGPTGLALDQGSQRLYVLTRFDNAISVVNTSTKSEIAHVPMYNPEPSSVTVGRPFLYEASTSSSHGDSSCASCHVYGDFDSLAWDLGNPDAEVFNHPGPFIGDTTNLFTGLPTPEEFHPMKGPMVTQSLRGMANHGAMHWRGDKTGGNDALSVQPNGGSFDEHASFMKFREAYVDLLGRASPITVGEMESFADFILQVKYPPNPIRPLNNTLTVAQQAGSGLFDIRECAVAGCETCHTLDPGSGFFGGTGASTFDFQTQMFKVPHLRNVYQKVGMFGMPEAPGLISQNNGHMGDQVRGTGFLHDGAIDTVYRFMLGLGFSVDFGFAPVPNGFASSPAGDAERRQIEQYMLAFDTDLAPIVGQQITLTSSNDLVAGPRIDLLVARADLGECDLIVKTQFLLRELGYLYIGSGQFAQNRVALPPIGHAALKLLAKLAGRELTYTCVPPGSGVRAALDRDEDGFRDGDELDAFSNPADPSSTP
>NZ_CP012159.1|WP_082362879.1|7912860_7914228_-|CapA-family-protein
MRRCGVALVLCATAALSGCGRDRGTGDTAVAPDAPGSTRKGLPASLAGMAEASFSAPSPDPSMPSPRPAPRPGTFTLLAGGDICLGKGLGKTLLDDPTFDPFEHLTGLLATADVRFANLESQISDQKGETQHPKNPLVFVGPPIGADALGRAGFDLVSLANNHMWDYGERAFYDTLDHLDRVGVAYVGAGRNFTSAYGPVILERNGVRVAIVAVTDIWNQGVIWSHAARDRVAAADLNAIGVTVRALKKRSDIDLVVVSQHGGGEYLDTPLPFTRKFARAAIDAGADAFLGHHPHVFHGVEMRKGKPIFYSLGSFVMRVSREHPDAPLGMVARLALRRGEAPTAEVCPVRNADLKAYPLAVDPQRAATEAAFTERFQRISGNNKPAAALGAFTPEGCAPLIPEPTSGALDETARPPSGRAPVAQEGERAGGKTVSARAAAGVGKLGQGRGRDPSP
>NZ_CP012159.1|WP_156338919.1|7914715_7916863_+|hypothetical-protein
MSYEARPYYLNNVRGMHYSRTSEFLYFINTCGNGRAGVVSRMPLNEPALLTQGNALLGTKHDLNDDGETDLQIMSGGQQHRALHGARIHDLPAINSLAGITKEVLAGINWNQPHGDVLHVASLPPEGKCFAMRILASDAPEIVAGRVYHADDGTRIEWATYLLGGKPVEVTPAYGDMRDLMLSEDENEIFLSGLIESNNDDSFEACVCVVRRANDHATPVYGLKPKTLITSLMDPQQLSGDSETLYVVDETSVWRLDRTSNTKTEIVRELSVGVGLLVEAQGGGVTVYVADRSGALHVLEVPDGSSEPVTVSTEATYQLGGVPGFMSWANEEHTAIYIANRDANSVMRLDLPTGVLSTELPQCPTAPWGVEMVSSQEAFVSCDTEIGILARKIRVFDELCLGIGLVPFQHITASAVNPAVPGPNDGKANTPAGYYFGEYDDLPFGGTLSLMLNHRKAWEAGIRYYRISATPLGTEKTRIITNRFTDLRWSDALLPPCFETVDTTSNQKLFAIRPPEETWYNPHLAAQIATTTADNGHLVLKIEFFDAEGKPSVHGPFERLLLIDNTRYSSRLFLPRIGVDATTPPPNVHPALNCGCLSYTSKDQLVEIDYGAWQPQASGQYTLTVKRGNLLISELTQYGQVTAGEVLHTKKLTSANVPMRVGHLVGNCDIANIVITLSVPSRVIDGFGFINLSAQQSSSFTLVNGPVGHSNWPSP
>NZ_CP012159.1|WP_050433343.1|7916978_7917608_-|hypothetical-protein
MTGVDETARWRARGRRALASAACVGALLLGLSACERASSTCPSGVAHDPPRARALLTQLSTTDEGKTLLQRLPVTTPSLCFGQVPVSAIDDTGTLLLDDRLPDAEAAARLGHLLLHRVEGSPAPRAGEPDCDAAVHRALTAEARAFALELRLRRALGVTSTRYAFEADVWRVTPEAHQQTILTWLVAHPGGGEGVDALGEGYRRRCEGR
>NZ_CP012159.1|WP_050433344.1|7917650_7919126_-|VWA-domain-containing-protein
MRSRLSALWMVALLAGCAAGSSTTPGASSPAGAEKPGAGTDAAAQPVAASTDPVAVVATGEPGRKAHTGPWIGAAGASDFVLPGRQETQLGVWIDVPEALRKARVPASVALVVDVSGSMGGEKIEHAREAARSFISGLADGDQVSLIAFSDTARELVAPVILDATTRRRVLSTVAELTPLGGTNMFDGLRLGGGRAASAPSTHAVRRVVLISDGQANVGPSSPEVLGALAQQGAERGVQVTSLGVGVDYDESTLNALAIHSSGRLYHMTRSDEMPEILSKELALLQGTAATDAFVEIVPAPGVELLGVQGARVERASDGAIRVRLGTMFAGQHREMLVRARLQAPSEGAHALASVRLHFRDPGEGNLERVQEIVARYQVTPDTRLVAAHQNARTQTIAAMMDAGQAAVDAAQQLNTGDFEAADKVLAVAEKKLKDTAAKATSKNEQERALAAAASVSKQRTTTRAAAAAPAPARRATVLEMNGAGMQQMGY
>NZ_CP012159.1|WP_050433345.1|7919478_7920573_-|DUF4325-domain-containing-protein
MTGSTRRKATSPPAGELETFILQQVLEHPDDIARITAEHFGITRQAVSRHLKRLVEEGKLQASGATRSRTYDLAILSEDAFSLDVSPALDEHEVWRARVSSLLRGLPKNVEAICHYGFTEMLNNVVDHSEGRSVTIAVRRTAASVVILIRDDGVGIFRKITKALDLSDERLAVLELSKGKLTTDPRRHSGEGIFFTSRMFDTFYLASGPIRLLCRGSKSMLLDAREPWLPVQDLLALDPREGTDVLLDISTQSERTMESVFDRFSDSLEEDYGFVRTQVPVSLARFGEENLVSRSQAKRLLVRFERFKEVVLDFSGVETVGQAFADEIFRVFPLDHPGVRLSWLNATSQVEKMIRRAIAARGES
>NZ_CP012159.1|WP_050433346.1|7920726_7922127_-|sigma-54-interacting-transcriptional-regulator
MTRKPVPLGTTQEPAREERSARHLERPFLFVVLHGDRPTLGGARYSLWETDLVAIGRGPERAASRVHEGGTRRLEVRLPDAAISKTQARLIRRGGGWAFEDAGSKNGSFINGRRVGNTTLQDGDFIELGNVVLRYRAGLPASPSSASDLDLQGAEIGGFSTLVPQLADDLDALTRIARAPVPVLLLGESGTGKEVLAAGLHAHAGRPGPLVAVNCGALTASLLESQLFGHLKGAFTGAIRDEPGYVRRANGGTLFLDEVGDLPLPAQATLLRVLEEGEVVPIGGTTPIKVDLRVVAATHRPLDKMAIQGEFRVDLLARLSGHRHTLKPLRQRIEDMGLLVGALLQRSKVRGASESGFTVDAAKWLLSHPWPLNIRELSQALGVAAALAEERLIQRAHLSDRGQEEPEPDAEMNRMTPDDPLRGRIMALLEKNRGNVSDVARDLGKSRVQIYRWMQKLSIDIEDYRP
>NZ_CP012159.1|WP_169796692.1|7922123_7926854_-|protein-kinase
MREESSSPPPTAASVTADVARVEATFPPRQSGTSSSVAFERTVASLLAGGFLEHYEIIRKLGEGGMGVVLLARDTRLGRLVAIKLLQNRGRSTTRLLAEARATALCRHENIVVIHDVDEADGGPYMVLEYLEGRTLRDVLSSEDRGPRRALPRGLAIDIVTSVLRALAAAHARGVVHRDLKPENIMILDAGGIKVLDFGLARCGDGLDPSDGGTLAYMAPEQWRGEPIDARTDLWAVGVLLHELLAGEHPLSPLTRERLEQVADLDAPMPRLRDAFPELSALSAIVERCSNKRREARFASADELLTELTPLRGRATSLAEGELPFAGLSAFQEADADRFFGRERDIAALTRRLRRQRLITVVGPSGAGKSSFLRAGVIPALKHSGEDWDVLVLRPGRAPLLALGEALAGVEARAEGGEDGPPVSDELRVEPGLLGARLRAHCRARGPGSHALVFVDQFEELYTQGTAPSERSAFLQCLLGVADDASSPLRVVVAIRSDFLDRMAEDPRFLGEVTQGFFLLPPMGPEALREALLRPVEAAGHHFEDEAMLTGILDELSLARTPLPLLQFSAVELWEARDPESKCLKRASYERLGGVVGSLSTHADTVFSTLSLPDQRLCRAVFTRLVTPERTRAIVSLSELASLDDDPDAVETLVQHLCTARLVLLEVGGHPGAVLVELVHEALIERWPRLARWLDESAADAQLVARLRAATSQWQVGGEAPGLLWRDRAAEEARAWYERRRVDPEVERGLLLGRSEERYLLAMIELQDQARRRRRRAIVGAFAVLGAVSILVLLLALSAQNEARRADAEAARVKERNIELSLQALRGRNATRILAARKHKDDPTLVLALAREVEPDAIPKEWAEIVSEALSSGVTRHEIAGVHGDSAIYAAAISPDGTRILTASHDKTARILAAGDHQHLATLRGHDAYLWFAAWSPDGTRILTASGDSTARIWNADGTGEPLVLRGHEEHVNSALMSPDGQRVVTASGDRTARVYRAADGEQIALLAHGAPVTVARFSPDGLHIVTTSLDGIVRVWDADGKRAPRLLRGHIGEIVGAAWSPDGAHLATAGKDTTVRVWDAFAGTERLTLRGHEDKVMNVVWSRDGKRIASVSKDKTARIWDTEGAVPPVVLRGHKHWVYTADFTPDGRNLLTASLDTTIRLWGLDEIVTPIVLAGHTDNINDIAWSPDGARIATAASDGTARVWRADGGGSPVVLRGPTRHTSAATWSPDGARIVTISSVGKAQVWSLDDLSSPISIGHDDQSLWRVDWSPSGDRIVTASTDGWVRVWASDGAGLQAETRVPTEPDAMVGAWFEPAGDRVVVADGVGTLYLWNVGQAGERTVLTRDAEFESRYWTGAHWSPDGARILASFGGSTARIWDVRDAAPPITLRGHEAKVTFASWSPDGRRILTTSKDRTARLWAADGAAQPVVLHGHGDVVSWASMSPDGERIATASEDTTTRIFRADGSGQPFVLGGSAFAIRHVAWSPDGKTIAQHAEEPFARLWPAVEPFRGPDDVRLWRATSYCIPVPIRRELLQVTEDEAQRDQDACVRRVLEARAAEGSAGGVSARERAARP
>NZ_CP012159.1|WP_156338920.1|7927569_7928277_+|hypothetical-protein
MVLLGRASAPHRCRLLTEVALRHVIQHAITRASTHRFTQRGPVRLHVELALLLGSGFDGDPQLPWAAAALGVPDLDQSYRAEALHRGACAYFEALGRETPGRTGGMLERLAAFAEGARVAGPGRVEDEALRVMAALDAEKATYVGEASLRQLVARASGTCGGLPEASRSASVVMLAGLMFVFGHQCDEDAMHPWIAASLGAEEASRGEVLVGAIRRWAARWRDEEAGFEPPGGNP
>NZ_CP012159.1|WP_050433348.1|7928273_7929038_+|N-acetylmuramoyl-L-alanine-amidase
MSDTRFVPASPTSGEGATEHVHATTQACPDRRVIVIDPGHGGTVDEDGSKANNATSVSKVREKVLTLQYAQSLKQQLASAEVQAIFRSKNYCEVKTILTRETDVNPSGADRVAVATSNKADILLSIHFNGFDDPRARGTETFYKAKQNGHQTNEAEDLALAEAVLEAAVAAIKVFDSKGRSREAKADKDTQHKSIWVLRDPGIGLSGKMCRSAMLEVEFVTNAVADHHLVSGPKATQNRDAVMLAVAKALAKAL
>NZ_CP012159.1|WP_050433349.1|7933183_7933975_-|class-I-SAM-dependent-methyltransferase
MPLPRVHLFEWNDLDGAPEVLRETVIESLSNTLRWGGVLRELVTPFRAFLEETGASDVLDLGAGAAGPARVLAEELQRAGVAPPRFILTDLAPRIEAWEEARAAYPGIIDFEPNPVDATAIPPALGEGRARIIINALHHFRPEIAQAVFADAVRSRAGIFIAEGFGRNPLRFPTMWPAGLPALLLNPWLSRRHRLQKAALTYLTPIVFAASAWDGFVSTLRVYTADELHAMVAPFGEGFRWRHGVFRYAPLGKGVYFYGVPHR

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Crispr_ID: NZ_CP012159_37

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012159_37

8340345-8340485

Orphan

Consensus_repeat	Method
GGGATGCCGTCGCCGTCG	CRT

3 spacers

The CRISPR arrays of NZ_CP012159_37

>merge|NZ_CP012159|37|8340345-8340485|CRT
GGGATGCCGTCGCCGTCGCTGTCCAGGTCGCGGAACGCGGGAATGCCGTCGCCGTCCGGATCCGTCAAGCCCTCGAAGATGTCGGCGATGCCGTCGCCGTCGCTGTCGAGGTCGTCCAGATCAGGGATGCCGTCGCCATCG

>NZ_CP012159|37|10|8340345-8340485|CRT
GGGATGCCGTCGCCGTCG	CTGTCCAGGTCGCGGAACGCG
GGAATGCCGTCGCCGTCC	GGATCCGTCAAGCCCTCGAAGATGTCG
GCGATGCCGTCGCCGTCG	CTGTCGAGGTCGTCCAGATCA
GGGATGCCGTCGCCATCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012159.1\|WP_156338957.1\|8341902_8343198_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP012159.1\|WP_050433614.1\|8346356_8346632_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050433600.1\|8328517_8329255_-\|di-trans,poly-cis-decaprenylcistransferase	unknown	unknown	gnl\|CDD\|259850
NZ_CP012159.1\|WP_156339358.1\|8336058_8337195_+\|SUMF1/EgtB/PvdO-family-nonheme-iron-enzyme	unknown	unknown	gnl\|CDD\|335469
NZ_CP012159.1\|WP_050433601.1\|8329515_8330886_-\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|236846
NZ_CP012159.1\|WP_156338955.1\|8332289_8333237_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|197548
NZ_CP012159.1\|WP_156339359.1\|8348182_8353003_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|223256
NZ_CP012159.1\|WP_050436210.1\|8346634_8347123_-\|SsrA-binding-protein-SmpB	unknown	unknown	gnl\|CDD\|376590
NZ_CP012159.1\|WP_050433608.1\|8337955_8338570_-\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|99749
NZ_CP012159.1\|WP_156338958.1\|8343194_8343887_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050433612.1\|8343954_8344500_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050433613.1\|8344536_8346105_-\|DUF362-domain-containing-protein	unknown	unknown	gnl\|CDD\|377193
NZ_CP012159.1\|WP_050436209.1\|8341264_8341906_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_156338959.1\|8346173_8346329_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050433606.1\|8334487_8335981_+\|sigma-54-dependent-Fis-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225114
NZ_CP012159.1\|WP_050433605.1\|8333366_8334287_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP012159.1\|WP_050433603.1\|8331671_8332256_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050433599.1\|8327800_8328265_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|380015
NZ_CP012159.1\|WP_050433616.1\|8353051_8353690_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|184923
NZ_CP012159.1\|WP_050433602.1\|8330882_8331620_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816

Protein	Function_ID	Function_description	E-value
NZ_CP012159.1\|WP_156338957.1\|8341902_8343198_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	5.68392e-17
NZ_CP012159.1\|WP_050436210.1\|8346634_8347123_-\|SsrA-binding-protein-SmpB	gnl\|CDD\|376590	pfam01668, SmpB, SmpB protein.	3.38725e-64
NZ_CP012159.1\|WP_050433600.1\|8328517_8329255_-\|di-trans,poly-cis-decaprenylcistransferase	gnl\|CDD\|259850	cd00475, Cis_IPPS, Cis (Z)-Isoprenyl Diphosphate Synthases. Cis (Z)-Isoprenyl Diphosphate Synthases (cis-IPPS) catalyze the successive 1'-4 condensation of the isopentenyl diphosphate (IPP) molecule to trans,trans-farnesyl diphosphate (FPP) or to cis,trans-FPP to form long-chain polyprenyl diphosphates. A few can also catalyze the condensation of IPP to trans-geranyl diphosphate to form the short-chain cis,trans- FPP. In prokaryotes, the cis-IPPS, undecaprenyl diphosphate synthase (UPP synthase), catalyzes the formation of the carrier lipid UPP in bacterial cell wall peptidoglycan biosynthesis. Similarly, in eukaryotes, the cis-IPPS, dehydrodolichyl diphosphate (dedol-PP) synthase catalyzes the formation of the polyisoprenoid glycosyl carrier lipid dolichyl monophosphate. cis-IPPS form homodimers and are mechanistically and structurally distinct from trans-IPPS, which lack the DDXXD motifs, yet require Mg2+ for activity.	2.51165e-112
NZ_CP012159.1\|WP_156339358.1\|8336058_8337195_+\|SUMF1/EgtB/PvdO-family-nonheme-iron-enzyme	gnl\|CDD\|335469	pfam03781, FGE-sulfatase, Sulfatase-modifying factor enzyme 1. This domain is found in eukaryotic proteins required for post-translational sulfatase modification (SUMF1). These proteins are associated with the rare disorder multiple sulfatase deficiency (MSD). The protein product of the SUMF1 gene is FGE, formylglycine (FGly),-generating enzyme, which is a sulfatase. Sulfatases are enzymes essential for degradation and remodelling of sulfate esters, and formylglycine (FGly), the key catalytic in the active site, is unique to sulfatases. FGE is localized to the endoplasmic reticulum (ER) and interacts with and modifies the unfolded form of newly synthesized sulfatases. FGE is a single-domain monomer with a surprising paucity of secondary structure that adopts a unique fold which is stabilized by two Ca2+ ions. The effect of all mutations found in MSD patients is explained by the FGE structure, providing a molecular basis for MSD. A redox-active disulfide bond is present in the active site of FGE. An oxidized cysteine residue, possibly cysteine sulfenic acid, has been detected that may allow formulation of a structure-based mechanism for FGly formation from cysteine residues in all sulfatases. In Mycobacteria and Treponema denticola this enzyme functions as an iron(II)-dependent oxidoreductase.	3.63588e-13
NZ_CP012159.1\|WP_050433601.1\|8329515_8330886_-\|HAMP-domain-containing-protein	gnl\|CDD\|236846	PRK11100, PRK11100, sensory histidine kinase CreC; Provisional.	2.83831e-62
NZ_CP012159.1\|WP_156338955.1\|8332289_8333237_+\|hypothetical-protein	gnl\|CDD\|197548	smart00157, PRP, Major prion protein. The prion protein is a major component of scrapie-associated fibrils in Creutzfeldt-Jakob disease, kuru, Gerstmann-Straussler syndrome and bovine spongiform encephalopathy.	2.90275e-05
NZ_CP012159.1\|WP_156339359.1\|8348182_8353003_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|223256	COG0178, UvrA, Excinuclease ATPase subunit [DNA replication, recombination, and repair].	0
NZ_CP012159.1\|WP_050433608.1\|8337955_8338570_-\|Uma2-family-endonuclease	gnl\|CDD\|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	1.04773e-29
NZ_CP012159.1\|WP_050433613.1\|8344536_8346105_-\|DUF362-domain-containing-protein	gnl\|CDD\|377193	pfam04015, DUF362, Domain of unknown function (DUF362). Domain that is sometimes present in iron-sulphur proteins.	1.4178e-41
NZ_CP012159.1\|WP_050433606.1\|8334487_8335981_+\|sigma-54-dependent-Fis-family-transcriptional-regulator	gnl\|CDD\|225114	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms].	0
NZ_CP012159.1\|WP_050433605.1\|8333366_8334287_-\|hypothetical-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	1.06803e-05
NZ_CP012159.1\|WP_050433602.1\|8330882_8331620_-\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	2.18678e-77
NZ_CP012159.1\|WP_050433599.1\|8327800_8328265_-\|hypothetical-protein	gnl\|CDD\|380015	pfam17775, UPF0225, UPF0225 domain. This entry represents an NTF2-like domain found in bacterial proteins.	1.41912e-23
NZ_CP012159.1\|WP_050433616.1\|8353051_8353690_+\|hypothetical-protein	gnl\|CDD\|184923	PRK14959, PRK14959, DNA polymerase III subunits gamma and tau; Provisional.	0.00207083

>NZ_CP012159.1|WP_050433608.1|8337955_8338570_-|Uma2-family-endonuclease
MGRVVFAEFSSARRLSLAEWVGLPEDESGELVDGWLVEEEVPDAIHEVVVAWVIGALRGWLVPQRGLVLGSEAKFAVSGPRGRKPDASAYLPGSKMPPRRGVIGTPPHLMVEVVSPTPRDARRDRVEKLNEYAAFGVRWYWLIDPQNQTLDILELGADGRYVHALAAVDGVVTLVPGAEGMTLDLDALWSEVDQLGPESGEASL
>NZ_CP012159.1|WP_156339358.1|8336058_8337195_+|SUMF1/EgtB/PvdO-family-nonheme-iron-enzyme
MALTVAFTSLAGCNRGGGNAASDPDAAPPWAVPEPPPEPRPGMAWIPPGVLLAGTPPDRIPRIADEEMAGEQVVMRGFYIDLYPWPNEVGAIPTTAITQDQARALCEENGKRLCSELELERACKGPNNATYEYGDVYKAATCGTGQTRNLIPNGFNGACESAFGVHDLHGGVWTWTSSQWQRGSAKPGLVALRGGNGPNGDLVGRCAHGRGIRPDMRRPDIGVRCCAGEQNTFEVVLEVTRGQPLRLLNPMDEQLAAQLAQISTVDQFTVERIWMWHPLGNEELLLGGGCAHTPGQRNQCGIVAARMRFDQPVLLSFVPSDWWTPTLGEFESARELMLYGGDNEGAFRRRMSYEWGRIGLGDKERKLKRKGKREPTFD
>NZ_CP012159.1|WP_050433606.1|8334487_8335981_+|sigma-54-dependent-Fis-family-transcriptional-regulator
MLPEKKQILVVDDEANLRRVLAAQLSRDGYEVHTAEDGEEGIAFLKEHHIDLVLTDLRMPKVDGMDLLRASLRDDPSRPVVMITAYGTVDNAVEALKTGAFDYITKPADQAEVRMVVKKALRTRDLERADATRDLPQAPHIRSESTRFGIIGESQAIQDLYSILERVADTPTTVLIAGESGTGKELVARALHDNSSRRERPFIKVNCAAIPKDLMESELFGYERGAFTGAVGSKPGRFELASGGTLFLDEIGEIPNEMQVKLLRVLQESEFERVGGIKTIRVDVRLVAATNRDLKREIAAGTFREDLFYRLNVVPITLPALRERKSDVPHLAAHFVAKFNARLKKNVEGVEPDALERLTSYEWPGNIRELENVIERAVLFADGQRIRVEDLPEDVRLGRSQTAATGVSLTAAHPVHEGNNGPDSSAGQAPAGAERRGTEGLKEQVKAAMSKLERDLIERALKQTNGNVTHAARLLKISRKGLQLKMKELNLRERDPD
>NZ_CP012159.1|WP_050433605.1|8333366_8334287_-|hypothetical-protein
MRVMRACRVGLGAGVLLATGWALAQEPTMPAADDPICTRTPTEADLEGAKGAHKAAIQFYERADYDRAIRYWNDAYEFDCTAHGVLINIASAYERKGDRAAAVATLETYLTRAPDAPDALTIQERVQNLQAVLKAEQERRTPPPVTTTPPPVVVKPPPPQPEMVRPYGYAPLVLAGAGGAAVAVGAILLPIGLSTISAAEKDCGGGRTNCDPVVADKGNRGRSQVAIGGVVMGAGALAVGGGLAWHFIFNKPVPVYPTQGASGTASSANGGGGSQGSEAAPPPGPSIDIAPSVGYGFGGLSISGSF
>NZ_CP012159.1|WP_156338955.1|8332289_8333237_+|hypothetical-protein
MTHIAPKTLATTPTHLVPSGIMQQPPGYPPPPGGAYGPPGPPPGGGHGPPGGGFGPPGYGHPGGPHGPGGFGHGPPGGGNVPPGGPFGPPGYFPPGAGHPGGHQGPPGGGYGPPPPRKEGTSIAVIALIALIGFGVFGLGGCLVCFYLGASTSPTSTPTASSTTPTVAPTATETSTWITSERPFVKFLAPPRWDKALKDDWGVFTSPDGQAVFAFTTFSRPGESTARLSRAAWALGVTDIQWGSPSTGTIGEEKFSARTGEGTCNFNGPGGYIWYATVNPGSVEQILLIYTVSAKGDRSHKDAALTSVRSLRRRP
>NZ_CP012159.1|WP_050433603.1|8331671_8332256_-|hypothetical-protein
MPLPFGSEAIAHWAASRHLSYVAHPDEGWFRQWEPYVTLTPPGTYYNACTWTAYGGHICIVEPWYAAEGEVPLERTLLGFAVHNGVQRRAAVRFGEHFTTRAIFLEGPPPIPVKIGDPAWDEHAATFASSPEVAAAAFHPRLRRLLAQRGFQGHLELRARGGVVVHLAGAHPHPGGYELLLTAVREIVDAAVAR
>NZ_CP012159.1|WP_050433602.1|8330882_8331620_-|response-regulator-transcription-factor
MAKVLVVEDEPAIAESIAFFLRRDGFGTTVVNTLADAERELPRADLVILDLTLPDGSGFELLSLARRSAAGPAIIVLSSRDSEADRVAALETGADDYVTKPFSPREVVARVRAVLRRAAGHAVATAPSDLPPAPVAAPLALQVDESTRRAHVRGQEVDLTRVEFDLLACMLAAPGRVFTRPQLIDRVWGDGFAITDRTIDSHVKALRKKVVEAGGDAALIETVRGVGYRVTDRPAQDGEGSKGEA
>NZ_CP012159.1|WP_050433601.1|8329515_8330886_-|HAMP-domain-containing-protein
MIRLVITAAAAICLILLVAIFVSRLVRTRTAGMSVRMQIFIALGAVIGAFALGLGVLVIDRIEARARFLAEGSARDEAAVFAAVVAMEIETRGVRLEDVRSVDAGGLDVVLNLALLDPEGRTVRSSGPSPGEPGNVFVTAPVLVRGERVGAVRVVKPTIVVERMVADFAPPILVLSTVLVAAAAVSSLIIGRAIAAPIESLTDFAVRVSEGERRAPPPPAHGREVQRLARAIDTMRRDLEGRPFVETFAADLSHELKNPVAAIRASAEVLEGGALDDREEATRFVGRIQEATARIEAMLGDLLSLARMEARGVEQMEVVDLMSVAEAAADRARERGSAVVVTGAGAIVRGDALWLGRALDNLLDNARMHGDPEAPVRVALTRADSKVLLSVKSRGQIARHIAGRMFRRFVTTRADKGGTGLGLAIVRAIAEAHSGSAECIERGPPDVEVQLSLPAA
>NZ_CP012159.1|WP_050433600.1|8328517_8329255_-|di-trans,poly-cis-decaprenylcistransferase
MAHPNLPRHIAIILDGNGRWASTRGLPRPKGHEEGLKAVRLAVRSCRERGIPNLTLYAFSVANWARPKDEIDGLMRVCLEFAESEREECIRRGVAVQVIGDLDELPTLTRRAVEHMVEATRGGTAMTLALALSYGGRRDMVNAMRTLAARAQAGLVIPEEINEASLRSFLTTSELPDPDLIVRTGGEKRLSDFLLYESAYAELFFSDVLWPDFDESVLDQALAAYGRRQRRYGRTGEQAGRVAVP
>NZ_CP012159.1|WP_050433599.1|8327800_8328265_-|hypothetical-protein
MPKPQLCPCTSGLSYRACCAPFHAGGEPPDPRTLVRSRYAAFALKEAAYLVRTLDAAHPDRALDATLYTRAIKDGQLRYMGLTLLDAEDVDEVGVARVLFLAKIFERGRDRSFVELSDFRHDGTGWRYLAGINVAARELPAGGAGLTIARFRQG
>NZ_CP012159.1|WP_050436209.1|8341264_8341906_+|hypothetical-protein
MRAAVALGRERLGRTRGGRFGLFAAMGVALGQGALLALLQDGTSAAPALDGTLRSAAQWLAWMGAGPLALAAANDRPGADRSEGIEVLAASRGTYPATFHAAQTLAAMQMVALVIAAPVLLLALLGAGLSSTPAGAMRALGLGGGVLAFAVTTGILLGGLASISGRIAGPRGRSLLAAIVLVPWILADLAGNARWSIPGALDAFLSLATGGAS
>NZ_CP012159.1|WP_156338957.1|8341902_8343198_+|ABC-transporter-ATP-binding-protein
MTEPRSPVDDAQPPAMPPEHPVDDTLSTAAPPELPVDDAQPPAAPPEQLVDDAQLPATLPEHPGDDALSTEAPPWGHAVDAQPPVVSPEAPVAPPPIVSLERVVAHDEAGPRGRPRGRLHHTQMALGPGRHAILGSPEDGTLALAQLITGHRRPVSGRVRVEGHDPARHAPTRARLGALLPEPDTWATRSVEAFVEMARRARGEASGSAATILEPFGLGRLLPRRPGSLSFAEARAVELALALSTPSPRLLVLFEPFADIALPADVTRAHLRALGSEGVCVALITSSRADALAEAEQIHVLHRGVMLPPVPTGRGGELVVQVEEPPHGEAGPPGIRTLAAALLDAPSIQALAWERAETSAPSGAPASPQPGPAVRPPHATLRVRSPDLEAASLAILEAASRTGVTLASIHAAPLKLGESRRRHPPQHGGGR
>NZ_CP012159.1|WP_156338958.1|8343194_8343887_+|hypothetical-protein
MSVMEAARTGFALSGRRLLGSRPLVVLGLGLVLTGTSAAIEISASPLGAVDRTLAATFRLLIPLVAFALATDAAGREHLREAAWPAARFGLGRGAVVLGMVAATVVGTAIAGALLAVLAAIAAHTAQAPPLAGDAVTSGVVGALAGAAYAGWFSLGGTLFKRGRGRVAPLLADLLLGGSTGVLGVVLPRGHTTNLIGGAPPLGLSQPASAGLLVAAALLLGLAAALRTRD
>NZ_CP012159.1|WP_050433612.1|8343954_8344500_+|hypothetical-protein
MAELNLDPAASRLTLRTRAAGMLARLAHDLELEAKHLRGHARVEGDTWTAELQIPVESLSVAGTLRGERLDPSALSASDRGEIERRVRDEVLRGTQEVKIQASGRTRTRAEVRIVLQGAETRLSAALDTREGPGGALTVSGSCRLSLRDLKIAEIKGPLGAFKIRDDVEVRFDITLRPTST
>NZ_CP012159.1|WP_050433613.1|8344536_8346105_-|DUF362-domain-containing-protein
MQIVRRPRVIIRRCPTYDVERIRRIVREGMEELDLRPRGRTLIKPNTVASGEFFPHAYTRPEFLEGVVQALRDRDDGQVAELAVGERCGITIPTRMAFEGAGYYPMFKRLALKHYHFEEEPQLEIPLTHEGRLRDYLFTPEPVAKADFFVNCPKFKSHPWTTVTFSIKAYIGIQDDRHRLIDHDHRLNEKIRDLQFILQPELIAIDAITAGEGRMLTPTPVDLGLVILGNNQVAFDTVCCWILGIDPMTVDHIRLSHEAGFGPVDLDQIDVTGDVSLEEAQLKARGFKVGLVRVEKYFEGTNITAYAGPPPETEYTDYCWGGCPGAIEEAIEILRQYDAQCDAKIPRMHVVFGSYAGGIDAKPGEKVVFIGDCTNWKGKLNGKLVQVESLYRDRSLLDPYRARHDDIFAKMVKVTGKLALSRNEPTVRLEGCPVSVAEQVLALVGLSGLRNPYLAPEQMMQFNKAYLMTRGVTAAKRLKGQAYQVHGPCGRGDAAPQGVTTAAIAPPSLGSGTSSAQPPGGE
>NZ_CP012159.1|WP_156338959.1|8346173_8346329_+|hypothetical-protein
MNHALGVVRGVAAQRGIPRKASGIRLGWPRLGAQQALSGAQRALSGAQGRC
>NZ_CP012159.1|WP_050433614.1|8346356_8346632_-|hypothetical-protein
MAQVNWTRGGEADLIKVDDDLVSVRSTRAAAPGTPLDGALTVGSQKPIRLKVARCKREESGSTFVIEGRLIDANREMRTELAGLARPVPPT
>NZ_CP012159.1|WP_050436210.1|8346634_8347123_-|SsrA-binding-protein-SmpB
MGRGTKKEKEAPGEKLIVRNKRATFEYQLGERYEAGMSLIGSEVKMLRAGGADLSDAWCAIHQGEAFLNGANIPELPGAAFGHVAKRPRKLLLHKEEIEDIQRAVDRDGMTVVATRMYFKEGRAKVELALAKGKKAVDKRESLKEKEADREARAAVARARRG
>NZ_CP012159.1|WP_156339359.1|8348182_8353003_+|ATP-binding-cassette-domain-containing-protein
MTTAGRGKGRGATSRGKKKAAASAQGSEALDANGASVNTPSAVSSDGTSGQGLSRVPLVRGLSCPSCARSFDPPRPGLFSYQSPAGACPACRGFGRTIGIDWNKVFPEPHRALDDGAIRPWSGKSTTWERRVLKRFCEREGIPFDRPWSELSEAQQNRVLDGEGSWSGGKFPGVRAWFKWLETRTYKMHVRVLLARYRAYDPCDSCGGKRLSPESLLYQVGGLDLAAWHGLELRDARTRLDALRATTTQGELSRRELSARLTYLERVGLGYLTLDRQARTLSGGEAQRVSLTAALGTSLTGALFVLDEPTVGLHPSDIPPLLGCMRELADSGNAVLVIEHEPLVIEVSDRVVELGPEAGRKGGKVVHDGSPAARPRLPPPAASVPARRSFNETITIVGARANNLRSVTARIPLGCVVAVTGPSGSGKSTLVEEILYRHIARARGYKDVDPPGIYTRVENTAGIRAVTLVDQSPLGRTSRGNPATYSGAWNRIRALFAQQPGAVERKLTPSHFSFNVALGRCEACAGEGSETIEMQFLADVSVTCPSCKGRRFQDIVLEVKLDGRSVADVLALTIDEALEVFSSEGAIQRTLRPLQQLGLGYLGLGQPLSTLSGGEAQRLKVARALADACVGALFLLDEPSAGLHPSEVARLNAALSALVTAGASVIVVDHDLDVIGAADWILDIGPGAGIEGGTLVAEGTPEDVARTDTRTGKALAAWFAQGVRAEGAADREAGVASASRPRRRADAKKQAPDGAVASADAPGAERREGLRRPAHAELPHAIEVTGAREHNLHEVSVSIPHGKLVVVTGPSGSGKSTLSFDVVFAEGQRRFLETLTPYARQFLPTLPRPDVDRVTGVPPSIALEQRTTRSGANSTVATVTEIAHYLRLLYAKVGDAHCPKCDIPIQGRAAEALYDDLRATRGKRTLLAPAVVARKGTYLDVFTAAARAGIQQAIADGVPCSTDVPPKLDKRKEHSIDLVIYEGRLADLDRALFDRALTFGKGSLKIVDAKGDTQLHSTTRTCPRCGQGVPELDPRWFSFNTKQGRCESCEGTGVSGHADDALQTPEPCEACEGSRLAPIPRAVRLAGERYHEAAGRAVGDAASWARTLAFTGDRARIAEAPHRELCRRLDFVTEVGLDYLALDRPAGTLSGGEMQRLRLAAQLGSGLTGALYVLDEPTIGLHPRDTQRLLGNLRKLADTGSTILMVEHDADTIRAADHLVDLGPSGGRSGGRILAAGTPAEVLSSPASPTGRALAAEASLASPARPPRPPAEAHVELIGARAHNLRVDRLHIPVGRMTVVAGVSGSGKSTLVQKVLYPAIRRGLGLEAPEPGPHEALRLPRGLTRALAVDQSPIGRTSRSVPATFLGIWDEIRRLYAATPDAQIRGYDAGRFSFNTAKGGRCPTCEGQGVISHEMAFLPDAVTVCEACGGGRFEPATLDVQYNGRSIGDVLGMTAEEAVELFANHLKIRAPLATMCDLGVGYLHLGQGSHTLSGGEAQRLKLASELTAGLRPKPTLYVLDEPTTGLHLADVARLLDVLDRLVERGDTLVIVEHHPAVIARADHIVELGPEGGSGGGQLVAEGTPREIAKKKTATGKVLKELFGRVG
>NZ_CP012159.1|WP_050433616.1|8353051_8353690_+|hypothetical-protein
MRRAWLFAPLALAWGCAPAMPPTAPAQGSPTGAASGAPAPSATPSGDALSTPSSLPAPHVDLPPTPPTVTGTIGGKPFSPKAALNLGGSDKGRVLIGLTDYATSCDDLVTPVAGNQMLTLQIEWKAGQVAFGADPGNPAIMNPTHILTTSDPGRPKRTVLPAQGSVQLVSAPEKSGSRTRIKLDLATDKDSVKGEIDLQLCWDVTSVDLSAN

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Crispr_ID: NZ_CP012159_38

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012159_38

8802990-8803833

Orphan

Consensus_repeat	Method
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	PILER-CR
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	CRISPRCasFinder
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	CRT
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	PILER-CR
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	CRISPRCasFinder

11 spacers

The CRISPR arrays of NZ_CP012159_38

>merge|NZ_CP012159|38|8802990-8803833|PILER-CR,CRISPRCasFinder,CRT,PILER-CR,CRISPRCasFinder
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAACAGGCTTTGGAGCGCCTGAAGGCGCCCGGCGCTACCCCGCCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAACCGCACCTCGTCCCTGCGCAGGAGTGGCGCCTCGTCCTCCCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAACCACAATGCGCAACGTACCCTCACTGTCGATCTCGATCTGACCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAACGCTACTGGTGTCACCACCCTCCCGTGAAGGTCAGCCACTCCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAACTCGCATCGACCGCGTGGAGGGCTTTCGTCGCAGCCTTGACCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAACCTGGAGGTGCCGCTCCTGGAGGCCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAACGTGAACTGGGGTAGCTGGCCGTTCCAGCGACGCTGCGCCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAACACTTGACGGATGCGATCCCTGATGGGGTCTTCGGCGACCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAACTGCTCAGGCATCTGCGACTGGGAGGTGCTTTCCGCCCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAACTTGTTGTCGAAGTACCCCTGGACCGCAGCCGCCGAGTCCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAACCAAGCGGATACGTGCCGGTGCCGGTTGAGCTGTATTGCCCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC

>NZ_CP012159|38|9|8802990-8803329|PILER-CR
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	AGGCTTTGGAGCGCCTGAAGGCGCCCGGCGCTACCCCG
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	CGCACCTCGTCCCTGCGCAGGAGTGGCGCCTCGTCCTC
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	CACAATGCGCAACGTACCCTCACTGTCGATCTCGATCTGA
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	GCTACTGGTGTCACCACCCTCCCGTGAAGGTCAGCCACT
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAACTCGCATCGACCGCGTGGAGGGCTTTCGTCGCAGCCTTGACCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAACCTGGAGGTGCCGCTCCTGGAGGCCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	GTGAACTGGGGTAGCTGGCCGTTCCAGCGACGCTGCG
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	ACTTGACGGATGCGATCCCTGATGGGGTCTTCGGCGA
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	TGCTCAGGCATCTGCGACTGGGAGGTGCTTTCCGC
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	TTGTTGTCGAAGTACCCCTGGACCGCAGCCGCCGAGT
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	CAAGCGGATACGTGCCGGTGCCGGTTGAGCTGTATTGC


>NZ_CP012159|38|31|8802990-8803406|CRISPRCasFinder
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	AGGCTTTGGAGCGCCTGAAGGCGCCCGGCGCTACCCCG
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	CGCACCTCGTCCCTGCGCAGGAGTGGCGCCTCGTCCTC
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	CACAATGCGCAACGTACCCTCACTGTCGATCTCGATCTGA
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	GCTACTGGTGTCACCACCCTCCCGTGAAGGTCAGCCACT
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	TCGCATCGACCGCGTGGAGGGCTTTCGTCGCAGCCTTGA
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAACCTGGAGGTGCCGCTCCTGGAGGCCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAACGTGAACTGGGGTAGCTGGCCGTTCCAGCGACGCTGCGCCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	ACTTGACGGATGCGATCCCTGATGGGGTCTTCGGCGA
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	TGCTCAGGCATCTGCGACTGGGAGGTGCTTTCCGC
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	TTGTTGTCGAAGTACCCCTGGACCGCAGCCGCCGAGT
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	CAAGCGGATACGTGCCGGTGCCGGTTGAGCTGTATTGC


>NZ_CP012159|38|11|8802990-8803833|CRT
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	AGGCTTTGGAGCGCCTGAAGGCGCCCGGCGCTACCCCG
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	CGCACCTCGTCCCTGCGCAGGAGTGGCGCCTCGTCCTC
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	CACAATGCGCAACGTACCCTCACTGTCGATCTCGATCTGA
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	GCTACTGGTGTCACCACCCTCCCGTGAAGGTCAGCCACT
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	TCGCATCGACCGCGTGGAGGGCTTTCGTCGCAGCCTTGA
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	CTGGAGGTGCCGCTCCTGGAGG
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	GTGAACTGGGGTAGCTGGCCGTTCCAGCGACGCTGCG
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	ACTTGACGGATGCGATCCCTGATGGGGTCTTCGGCGA
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	TGCTCAGGCATCTGCGACTGGGAGGTGCTTTCCGC
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	TTGTTGTCGAAGTACCCCTGGACCGCAGCCGCCGAGT
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	CAAGCGGATACGTGCCGGTGCCGGTTGAGCTGTATTGC
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC

>NZ_CP012159|38|10|8803428-8803833|PILER-CR
	AGGCTTTGGAGCGCCTGAAGGCGCCCGGCGCTACCCCG
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	CGCACCTCGTCCCTGCGCAGGAGTGGCGCCTCGTCCTC
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	CACAATGCGCAACGTACCCTCACTGTCGATCTCGATCTGA
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	GCTACTGGTGTCACCACCCTCCCGTGAAGGTCAGCCACT
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAACTCGCATCGACCGCGTGGAGGGCTTTCGTCGCAGCCTTGACCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAACCTGGAGGTGCCGCTCCTGGAGGCCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	GTGAACTGGGGTAGCTGGCCGTTCCAGCGACGCTGCG
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	ACTTGACGGATGCGATCCCTGATGGGGTCTTCGGCGA
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	TGCTCAGGCATCTGCGACTGGGAGGTGCTTTCCGC
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	TTGTTGTCGAAGTACCCCTGGACCGCAGCCGCCGAGT
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	CAAGCGGATACGTGCCGGTGCCGGTTGAGCTGTATTGC
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC

>NZ_CP012159|38|32|8803502-8803833|CRISPRCasFinder
	AGGCTTTGGAGCGCCTGAAGGCGCCCGGCGCTACCCCG
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	CGCACCTCGTCCCTGCGCAGGAGTGGCGCCTCGTCCTC
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	CACAATGCGCAACGTACCCTCACTGTCGATCTCGATCTGA
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	GCTACTGGTGTCACCACCCTCCCGTGAAGGTCAGCCACT
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	TCGCATCGACCGCGTGGAGGGCTTTCGTCGCAGCCTTGA
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAACCTGGAGGTGCCGCTCCTGGAGGCCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAACGTGAACTGGGGTAGCTGGCCGTTCCAGCGACGCTGCGCCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	ACTTGACGGATGCGATCCCTGATGGGGTCTTCGGCGA
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	TGCTCAGGCATCTGCGACTGGGAGGTGCTTTCCGC
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	TTGTTGTCGAAGTACCCCTGGACCGCAGCCGCCGAGT
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC	CAAGCGGATACGTGCCGGTGCCGGTTGAGCTGTATTGC
CCCGCAGTCCGCTCCCCGCTGATGAGGGGATTGAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012159.1\|WP_050433902.1\|8804643_8805561_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NZ_CP012159.1\|WP_050433894.1\|8792225_8795495_-\|error-prone-DNA-polymerase	unknown	unknown	gnl\|CDD\|235553
NZ_CP012159.1\|WP_050433904.1\|8806218_8807181_-\|PAS-domain-S-box-protein	unknown	unknown	gnl\|CDD\|132912
NZ_CP012159.1\|WP_050433900.1\|8801216_8801918_-\|SMI1/KNR4-family-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_156339008.1\|8800121_8801027_-\|methyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|226591
NZ_CP012159.1\|WP_050433897.1\|8798559_8799276_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_169796722.1\|8805704_8806163_+\|nuclear-transport-factor-2-family-protein	unknown	unknown	gnl\|CDD\|379275
NZ_CP012159.1\|WP_050433907.1\|8809623_8810520_-\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|378964
NZ_CP012159.1\|WP_082363553.1\|8811897_8813073_-\|citrate-synthase	unknown	unknown	gnl\|CDD\|99862
NZ_CP012159.1\|WP_050433905.1\|8807579_8808428_-\|methyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|226591
NZ_CP012159.1\|WP_050433891.1\|8789604_8789961_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|370170
NZ_CP012159.1\|WP_050433895.1\|8795482_8797303_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|176458
NZ_CP012159.1\|WP_050433893.1\|8791014_8791788_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187585
NZ_CP012159.1\|WP_050433892.1\|8790229_8790985_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|235500
NZ_CP012159.1\|WP_082362966.1\|8797313_8798213_-\|recombinase-A	unknown	unknown	gnl\|CDD\|238483
NZ_CP012159.1\|WP_050433908.1\|8810602_8811277_+\|glutathione-S-transferase-family-protein	unknown	unknown	gnl\|CDD\|223698
NZ_CP012159.1\|WP_156339007.1\|8799390_8800035_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050433901.1\|8803971_8804553_+\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|99749
NZ_CP012159.1\|WP_169796723.1\|8808504_8809350_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
NZ_CP012159.1\|WP_050433909.1\|8811318_8811891_+\|methylated-DNA--[protein]-cysteine-S-methyltransferase	unknown	unknown	gnl\|CDD\|376440

Protein	Function_ID	Function_description	E-value
NZ_CP012159.1\|WP_050433902.1\|8804643_8805561_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	9.97164e-36
NZ_CP012159.1\|WP_050433904.1\|8806218_8807181_-\|PAS-domain-S-box-protein	gnl\|CDD\|132912	cd07041, STAS_RsbR_RsbS_like, Sulphate Transporter and Anti-Sigma factor antagonist domain of the "stressosome" complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation. The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain of proteins related to RsbS and RsbR which are part of the "stressosome" complex that plays an important role in the regulation of the bacterial stress activated alternative sigma factor sigma-B. During stress conditions RsbS and RsbR are phosphorylated which leads to the release of RsbT, an activator of of the RsbU phosphatase, which in turn activates RsbV which leads to the release and activation of sigma factor B. RsbS is a single domain protein (STAS domain), while RsbR-like proteins have a well-conserved C-terminal STATS domain and a variable N-terminal domain. The STAS domain is also found in the C- terminal region of sulphate transporters and anti-anti-sigma factors.	9.32891e-46
NZ_CP012159.1\|WP_050433905.1\|8807579_8808428_-\|methyltransferase-domain-containing-protein	gnl\|CDD\|226591	COG4106, Tam, Trans-aconitate methyltransferase [General function prediction only].	8.32188e-22
NZ_CP012159.1\|WP_156339008.1\|8800121_8801027_-\|methyltransferase-domain-containing-protein	gnl\|CDD\|226591	COG4106, Tam, Trans-aconitate methyltransferase [General function prediction only].	6.90828e-27
NZ_CP012159.1\|WP_050433909.1\|8811318_8811891_+\|methylated-DNA--[protein]-cysteine-S-methyltransferase	gnl\|CDD\|376440	pfam01035, DNA_binding_1, 6-O-methylguanine DNA methyltransferase, DNA binding domain. This domain is a 3 helical bundle.	3.98925e-32
NZ_CP012159.1\|WP_169796722.1\|8805704_8806163_+\|nuclear-transport-factor-2-family-protein	gnl\|CDD\|379275	pfam13577, SnoaL_4, SnoaL-like domain. This family contains a large number of proteins that share the SnoaL fold.	7.04427e-16
NZ_CP012159.1\|WP_050433894.1\|8792225_8795495_-\|error-prone-DNA-polymerase	gnl\|CDD\|235553	PRK05672, dnaE2, error-prone DNA polymerase; Validated.	0
NZ_CP012159.1\|WP_082363553.1\|8811897_8813073_-\|citrate-synthase	gnl\|CDD\|99862	cd06109, BsCS-I_like, Bacillus subtilis (Bs) citrate synthase CS-I_like. CS catalyzes the condensation of acetyl coenzyme A (AcCoA) and oxalacetate (OAA) to form citrate and coenzyme A (CoA), the first step in the citric acid cycle (TCA or Krebs cycle). 2MCS catalyzes the condensation of propionyl-coenzyme A (PrCoA) and OAA to form 2-methylcitrate and coenzyme A (CoA) during propionate metabolism. The overall CS reaction is thought to proceed through three partial reactions and involves both closed and open conformational forms of the enzyme: a) the carbanion or equivalent is generated from AcCoA by base abstraction of a proton, b) the nucleophilic attack of this carbanion on OAA to generate citryl-CoA, and c) the hydrolysis of citryl-CoA to produce citrate and CoA. This group contains proteins similar to BsCS-I, one of two CS isozymes in the gram-positive B. subtilis. The majority of CS activity in B. subtilis is provided by the other isozyme, BsCS-II (not included in this group). BsCS-I has a lower catalytic activity than BsCS-II, and has a Glu in place of a key catalytic Asp residue. This change is conserved in other members of this group. For E. coli CS (not included in this group), site directed mutagenesis of the key Asp residue to a Glu converts the enzyme into citryl-CoA lyase which cleaves citryl-CoA to AcCoA and OAA. A null mutation in the gene encoding BsCS-I (citA) had little effect on B. subtilis CS activity or on sporulation. However, disruption of the citA gene in a strain null for the gene encoding BsCS-II resulted in a sporulation deficiency, a characteristic of strains defective in the Krebs cycle. This group contains proteins which functions exclusively as either a CS or a 2MCS, as well as those with relaxed specificity which have dual functions as both a CS and a 2MCS. Many of the gram-negative species represented in this group have a second CS isozyme which is in another group.	6.25275e-143
NZ_CP012159.1\|WP_050433907.1\|8809623_8810520_-\|AraC-family-transcriptional-regulator	gnl\|CDD\|378964	pfam12833, HTH_18, Helix-turn-helix domain.	6.60541e-17
NZ_CP012159.1\|WP_050433891.1\|8789604_8789961_-\|hypothetical-protein	gnl\|CDD\|370170	pfam08881, CVNH, CVNH domain. CyanoVirin-N Homology domains are found in the sugar-binding antiviral protein cyanovirin-N (CVN) as well as filamentous ascomycetes and in the fern Ceratopteris richardii.	0.00424724
NZ_CP012159.1\|WP_050433895.1\|8795482_8797303_-\|hypothetical-protein	gnl\|CDD\|176458	cd03468, PolY_like, DNA Polymerase Y-family. Y-family DNA polymerases are a specialized subset of polymerases that facilitate translesion synthesis (TLS), a process that allows the bypass of a variety of DNA lesions. Unlike replicative polymerases, TLS polymerases lack proofreading activity and have low fidelity and low processivity. They use damaged DNA as templates and insert nucleotides opposite the lesions. The active sites of TLS polymerases are large and flexible to allow the accomodation of distorted bases. Expression of Y-family polymerases is often induced by DNA damage and is believed to be highly regulated. TLS is likely induced by the monoubiquitination of the replication clamp PCNA, which provides a scaffold for TLS polymerases to bind in order to access the lesion. Because of their high error rates, TLS polymerases are potential targets for cancer treatment and prevention.	4.3102e-29
NZ_CP012159.1\|WP_050433893.1\|8791014_8791788_-\|SDR-family-oxidoreductase	gnl\|CDD\|187585	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs. PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	2.67208e-83
NZ_CP012159.1\|WP_050433892.1\|8790229_8790985_-\|SDR-family-oxidoreductase	gnl\|CDD\|235500	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated.	2.68611e-62
NZ_CP012159.1\|WP_082362966.1\|8797313_8798213_-\|recombinase-A	gnl\|CDD\|238483	cd00983, recA, RecA is a bacterial enzyme which has roles in homologous recombination, DNA repair, and the induction of the SOS response. RecA couples ATP hydrolysis to DNA strand exchange.	4.89689e-10
NZ_CP012159.1\|WP_050433908.1\|8810602_8811277_+\|glutathione-S-transferase-family-protein	gnl\|CDD\|223698	COG0625, Gst, Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones].	1.62077e-32
NZ_CP012159.1\|WP_050433901.1\|8803971_8804553_+\|Uma2-family-endonuclease	gnl\|CDD\|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	2.0627e-32
NZ_CP012159.1\|WP_169796723.1\|8808504_8809350_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	8.04809e-21

>NZ_CP012159.1|WP_050433900.1|8801216_8801918_-|SMI1/KNR4-family-protein
MLHYRPRFEALIEDLRRHPCIQVLDAAIPPGLSEERIEALEREAGGKLPAAAHTFFREMNGVTVFWRAPRELPGELWMAYIDQEPQSDYFHPEQTHGILIPPLEEIVAFTQWPREFVVLGDEPARFAGDELAHADLARRIFPFDFHLRRSNEDAAMALVLFDDPERARVVKLISSGCLEPKAATTDFASYLELLVATRGEQRERERFEAWSSEPLTFDAAQLAERGRQYFRVP
>NZ_CP012159.1|WP_156339008.1|8800121_8801027_-|methyltransferase-domain-containing-protein
MSELRMDGRVAVDGRVAVDGRVAVDGRVAAGGWQVAGKSDDKLVEWDASTYHRISDPQFQWGSRVLERLYLRGDEVVVDAGCGSGRLTAALLDRLPQGRVIAVDRSQNMLEEARHNLAAYGDRVSFHVADVQESLHVGPVDVIFSTTVFHWLLDHPRLFRNLFAALRPGGRLHAQCGGAGSMRRVLEPAERLMHEPGYARFFEGWTEPWELAPAELSATRLRDAGFAPVRTYLEQVPTPMPGATALRSFLDKVLLRSHLARLPDDATRAAFVDTVVAKARQADPALVLDYVPLNLEARRPA
>NZ_CP012159.1|WP_156339007.1|8799390_8800035_+|hypothetical-protein
MRRLLISPRSAWLSLAWLPLLLTSGLLSGCLSHASEAGPSDPTHEHAASSSAAQRDVDPQHRRHDTSGTPRVRASAVPASTWTACYRDFQPEGDAPTDLERLATACGAITGLSPITPVHLGAPQSADDPSARLTFRARAGHCYRFFSVGTADVADLDVAVFDADGHIVAADASDDRFPVVPPRGPLCAEDDGTYALEIAVMRGKGSFVMQVWSD
>NZ_CP012159.1|WP_050433897.1|8798559_8799276_+|hypothetical-protein
MASKNHPNDEPLIGNWSLSLDWLDLLILIVIVTAAISAQHALGLDSLRPRYVGLMLAPLVLGALVARRKLLPVRRAPVKKGLTLVGVLSLFLMVPGVIVGAFGAFMWWRGMQEEPPRVDESLVQMEAELRASATPLEVVPVVDGVALPSDHGEPSAGDTEALFAALRDAKTPSTDVLARHKAEVRHQHEEELATRFAERRAENNTRALWCAAISALAIVLGGFLDSRRARHAPTPEGA
>NZ_CP012159.1|WP_082362966.1|8797313_8798213_-|recombinase-A
MFSMPLPATISRDLLRHTLPELEGRAKALPLGLVGINEVLPEGGIPRGGVVEIASPRGLGRATSIALSACASAQAEARLRGGATSDGAWCAWIDVMSTLYAPAVAAAGVDLGRLLVVRPPLESLARVAVRMASSGSFSVLVVDTLGVPGARSVVGRSRGVPVSRGSRQQATRADRERGSAEEGADLGRWLNVVRKLSLAVEGSDATVLLLTDRLAARPMPLPVSMRIEVDRLDEGRLSVRVAKDRQGRVTAPAAVPLRPVASAGGPLTSAGVVMGSAAAGASAGSTAGSSVTAAWPRSA
>NZ_CP012159.1|WP_050433895.1|8795482_8797303_-|hypothetical-protein
MSTARRIAAIVLPQLACELVGQRGAVAPGSKGPLSVILEASVHAVGAEGEGREALPATAVIDVVNEEARRYGVRPGQRVTEASALVAHLAVHRVTFAEIDAALGRVAEVALALGPTAAIQLGTKIEAGDRCAWGKGPYDTVWLDITGAAHLVGGEEALCDELAERLSVLGHRARIAIADGPRIAQALARWGVVSQGMGGAAPGRASSAQGARAEGEGGGSSRWLIAPPGRGADALSPLPVQALPLDAEVASFLVRVGLLKVGDLAKLPRAAAAARLGKAAAEIMALTGGFDPAPLQPFQPPRVLEEEASFEDGVEGAESLLFVLRGMTSRLGARLEARGEATGLLEVMIPYDRSVARLRALDLDRPLADGEDVEALRFAIELPAPLADAADLLRPLKARLEQIALLAPAVGVRLTAVQIVPARRVQLDLSRDRCADPDSLPALLAELSAEIGAERVGVLEVVDAHRPEARSRLVPASLEAAAAGKVVDPEAPDAMALPAPARMLPRAIPLGQVGRGAIVAVDRQIFSVEGMRFVMRLDGVEWWTSTPVSRDYFKAWFSAASPASAGGGGRSGGVGEGRQGALGPAGEAWIYVDRASGEAFLQGWCE
>NZ_CP012159.1|WP_050433894.1|8792225_8795495_-|error-prone-DNA-polymerase
MVRVSASFAELLGRSSFSFLEGASHPDELCERAGEIGLAALALCDRNGLYGSARAHSAAKKLGQRVIVGSELTLEPTLAPSSSEVPKVAEGARGRGAAGPVPSVALLVEEHAGYANLCRLLTAAHAEHEKGDAGIGVEAVAAAAAGLTAVVPLDPAVPMEAWEAVLGPLREGFGERVHVATWRRLDGRDPARAAAARAMAARFGVSVIASARPLYHHPSRKPVADVLACIRRGTTLDQAGTLLAANAEAALRAPGQMAALFRDEPGWVARTVEVAERCRFSLSELRYSFPSDTLCLPGESADEALRRLSLEGCKERYPGETPSSVQAQIEKELLLIQKLGVAPYFLSVQEIVKMARARGVLCQGRGSAANSAVCFVLGVTAVDPARSNLLFERFLSEERNEPPDIDVDFEHERREEVIQDIYARYGRDRAAMVSEVICYRGKSALREVGKAFGLSLDQLDRLSGLSTYHEIDVSEQRVAEAGLDPLDARVRQTVLMAQAIEGFPRHLSIHVGGFVLSSAPLHHVAPIEPARMEGRTVIPWDKDDLDELGFFKIDVLGLGMLTAIRKTLGLLHGRGMAPLGDALAGQGSFEPILALAQIPPEDPEVYEAVCHADTVGVFQIESRAQMAMLPRLKPKTFYDLVIEVAIVRPGPIQGGMVHPYLRRRTGEEAPVSPHACLEPILARTLGVPLFQEQVMQIAMVGAGYTPGEADQLRRDMAAWKKHGRLARHRERLLRGFVAQGISARFGEMLYQQIQGFGEYGFPESHAASFALLVYASAWLKVHHPAAFVCAILNSQPMGFYTPSALVQDAQRHGVEVRSVCVLKSDWDCTLEEAAEAGKPQVDGGEHALGGAQAQPAMRLGLRLIKGLGEAAGRAVVAAREEAPLAGLEDLVRRAGLKKNEIEALAESGALEGLSPSRREALWQARAPRLGGLFEGVPLEAEKPVGLPALAPLEQLSLDYGRVGLSVDDHPMRHLRASLRRRRVRRAEELPQLQHGESVRLAGLVVGRQRPPTASGVTFVTLEDETGTVNVIVQKQLFADSYQVARHAKIMLVAGRVERQGEVIHVLARELERLDLPGGGNVPARSRDFH
>NZ_CP012159.1|WP_050433893.1|8791014_8791788_-|SDR-family-oxidoreductase
MSNAETLHPLRDRVALVTGATRGLGRAVCRRLGALGAVVVAAGRRGADAEALVAELVRDGVQAYALPLDVTRESDRRDAVAFIERTSGRLDVLINNAAVWLESDNAGSATSRSPSETPLGVLRETFETNFFGPFALTQALLPLLRRSPAGRIVNVSSIRGSLTLQADPSSPVYPNKTLAYDTSKTALNAFSLLFAEELRHTRIKVNAVHPGWVRTDMGGPSADLGIEEGADAIVVHALLDDDGPTGGFFFREQRLPW
>NZ_CP012159.1|WP_050433892.1|8790229_8790985_-|SDR-family-oxidoreductase
MTKVLAGKVVLITGGSRGLGAATALAFAGEGADVAISYVASEEKAAKVARDVSALGVRARAFRADQGDPSQSEPLVRAVVEHFGHLDILVNNAAVAVQGKRVDDPDLDVAALDRQWAINVAGVIANIRAAAKVLPEGGRIISVGSGLGTRSLFPGATDYAATKAAVNGYTRGAARDLGPRNITVNVVQAGIMDTDMAASAAHNLPPSVLDMHPIRRIATVEEVAAAIVFLAGPNAGYITGSVLDVSGGVLS
>NZ_CP012159.1|WP_050433891.1|8789604_8789961_-|hypothetical-protein
MADALSPGSCTQTSRDLSFEQVNGSRSLSARRARREGSFSDSALTYYVASRDGVLIPLPGSSYVRMARNIHLEDGEDGVSLLAEGQRPDGSWEPGDFEFQDLVREDIANHDGRRKYGG
>NZ_CP012159.1|WP_050433901.1|8803971_8804553_+|Uma2-family-endonuclease
MGDPAEQRPAPATYADLEAVPAHLVAEILAGVLHTFPRPGPRHASVASRLGIDLGGPFDRGRGGPGGWWILFEPELHLGGDVLVPDLAGWRVERMPDLPDAAFFVLPPDWICEVLSPSTAAHDRYGKLPVYAREGVTWVWLVDPVERALEVHHLGSRGRWEVEMVVRGDVSVRAAPFDAIELDLAALWPRSRG
>NZ_CP012159.1|WP_050433902.1|8804643_8805561_-|LysR-family-transcriptional-regulator
MRLDLRHLHLLVAIDDLGSLHAAARRLHLSASALSLQLRDLEDRLGGQLFERRWRRLHVTPAGRRLTHTARAVLADLARAEAETRLLLAGHTGTLRITTACMQTYHWLPPVLESWSRAHPDTQVSIVGEAGVAPLDALRDGAIDLALVVGDAGDAPSDDRVQFTPLFRDELVALVSPRHPLARRRQVRARDLAAEAYWGAPDSFAPGTPLGDTLAADGVSFTRVTPLAYASGAPLEMVRANLGVTVCPRWFAEPDLARREVVALRIGGGLWLDWSAATARAGGSPHTASFIAEMKRHRPTPSAAG
>NZ_CP012159.1|WP_169796722.1|8805704_8806163_+|nuclear-transport-factor-2-family-protein
MPSTTAVRDTIERFHDAVNQRRADVIATLFAEKGVWEVAPPYGLRFAGRSAIEAGITGTLDATEVLVQSCGPIVVEFVDATHATARTSMQEFGRLRDGTSMHVAGTYHDALERQDDGAWRFVHRRFVAHYADDLPVPGRALFPSALAPASSP
>NZ_CP012159.1|WP_050433904.1|8806218_8807181_-|PAS-domain-S-box-protein
MDDPHKETSAHAGADENVEALQRRVAELEGALAERDRALAGLRLELDGLRAMEREQQLLIAILDQCSDFIGLATPDGHVKYLNDAGQKMMGIDGDEAAQRTIVPDYFHPEDLPFVEANILSELRKGGRWAGDYRFRNMKTGALFPVRYTVFSINDSETGEPIALASVTQDLTEQKRAQAEQTRLTEELIRAQAMALELLSTPLIPISDDVVVMPLIGTVDSRRAQQVMENLMQGVVSLRCHTVILDITGVSTVDSAVADALLRAAKGVSLLGARTVLTGISPQVAQTLVGLGIDLHGIITHGTLQSGIAWATAEKSRRAR
>NZ_CP012159.1|WP_050433905.1|8807579_8808428_-|methyltransferase-domain-containing-protein
MNDQCTTQDTVAFRRHADATEARNFEWDASTYHRISDPQYGWGMRALSRLRLRGDEVVIDAGCGSGRLTAELLERLPRGRVIAVDRSQNMLDEARHTLARFGDRVSFLAADLQTFVAEEPVDVFFSTTALHWVLDQDHLYRNVFASVRPGGRLHAQIGGDGTLRRLQRDTRTLMHRPEYAPCFEGFTDPWDFAAADISAARIRRAGFVDVETATESVPIVYPSAPPMRLFIERVILRHHLERLPDDSARTAFLDTLTEMIAKDDPPYVLDYICLDLCARRPS
>NZ_CP012159.1|WP_169796723.1|8808504_8809350_-|class-I-SAM-dependent-methyltransferase
MSEHPTNGSRTAGQPSTPTHEGPIEWDATAYHRISDPQFRWGMRVLDRLTLRGDEVVMDAGCGSGRLTAKLLERLPRGRVIAVDRSLNMLDEARQTLAPFGDRVTFRAANLQEEPSEEPVDVVFSTATFHWIRDHQRLFHNVFASLRPAGRLHAQCGGAGNLDRMHGRAEALMRHPDYARYFEGWTDPWEFASPQTSTTRLQTAGFEAIETDLEQEPTPFPDAPAMRIFVERVVLRHHLAKLPDDATRNAYLDTLMAQAGEDEPPYVLDYVRLNLKARRPA
>NZ_CP012159.1|WP_050433907.1|8809623_8810520_-|AraC-family-transcriptional-regulator
MSPSTPRSTYGILNPRAGFEHFRLVRHAPSPALAAWIDWIWCVDWDLPAPFEQEVLPHPCVNLVFESAFTKVHGVGTRRSLQRLEGRGWVLGVKFRPGGFYPFSRVPMRALKDRSLALDTALVSPDRAPTPALLDPPEPLESPAAHLERRVRALRGGEGAVSLVEAFFASLHPADEPGLREIMELALRAQQDHTLTRAEDLAKLAGTSLRSLHRAFDRYVGVGPKWVIRRARVHEAAERVAHGEHVAWAALASELGFHDQAHLIRDFKALVGATPAAYAARCREAAAARAPRPDEPPT
>NZ_CP012159.1|WP_050433908.1|8810602_8811277_+|glutathione-S-transferase-family-protein
MITQLIEGPRKRGELVVFHAPNSRSVGTLTLLDELGASYELRAIDLRADEQREPAYTGVNPLGKVPALLHDGVLVTEQVAVTIYLADRFADAGLAPALDDPERGAYLRWIAFQGSSFEPAMVDKAMKRTPAPRGVATYGEVEQVLSTLLGALERGPYLLGERFTAADVLWGISLGWLVSFGLVPKEPAVVAYVERIKSRPSVARVADLDRTLVARFDAAKETAG
>NZ_CP012159.1|WP_050433909.1|8811318_8811891_+|methylated-DNA--[protein]-cysteine-S-methyltransferase
MGARGRKEWVVSTALGPLRLRWSEQGLTGIRLLEEDEQTAGAMAATGATSTTSRPRDAHDEEVPDFVREAAARLAQHVAGEPQDLTGIPLDMRGLPDFHVQIYEAARRVGPGQTTTYGELAKQVGAPGSARAVGQAMAKNPFIVVMPCHRVLAAGQQPGGFSAPGGLVTKERLLRLEGAHMGPQQLTLLR
>NZ_CP012159.1|WP_082363553.1|8811897_8813073_-|citrate-synthase
MNHTNRTELNGAISPSGADVAPKPGPGQPRAGGLDGIVVADTALSEVDGERGHLLLAGHDLETLSAGGDVTFEDLCALLWQGALPRPEGRETLRAALAAGRVEAFARLDHLGDALRAVDAMDALRAAVAHLAGDAAPAAIAGAAATFAAAWARLRAGEAPVAPDPSLRQAEDFLRMVRGAPASDAEARALDTYLVTVSDHGMNASTFTARVVTSTGSDRVSAVVAAIGALKGPLHGGAPGPVLDMLDAVGSAEHADAWIAAELSAGRRIMGMGHRIYRVRDPRAAVLERAIERLSREAHGGAAVRLDLSRAVEKAAERALEVKHPDRPLRANVEFYTAVLLEAVGLPRELFSPTFAVGRIAGWCAHVDEQRRTGRLIRPNSRYVGARPATS

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Crispr_ID: NZ_CP012159_39

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012159_39

9159455-9159544

Orphan

Consensus_repeat	Method
ATCCCGCCATCGTGGCGGGATTCATGGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP012159_39

>merge|NZ_CP012159|39|9159455-9159544|CRISPRCasFinder
ATCCCGCCATCGTGGCGGGATTCATGGCGGGATACGCCCGCGGGCGCGCCTGCCTCTGAGGCATCCCGCCATCGTGGCGAGATTCATGGC

>NZ_CP012159|39|33|9159455-9159544|CRISPRCasFinder
ATCCCGCCATCGTGGCGGGATTCATGGC	GGGATACGCCCGCGGGCGCGCCTGCCTCTGAGGC
ATCCCGCCATCGTGGCGAGATTCATGGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012159.1\|WP_050434129.1\|9144793_9145798_-\|NADP-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|176191
NZ_CP012159.1\|WP_050434132.1\|9147549_9147903_-\|DUF2200-domain-containing-protein	unknown	unknown	gnl\|CDD\|337575
NZ_CP012159.1\|WP_082363010.1\|9174101_9175856_+\|energy-dependent-translational-throttle-protein-EttA	unknown	unknown	gnl\|CDD\|236992
NZ_CP012159.1\|WP_050434140.1\|9161046_9164019_-\|DUF1156-domain-containing-protein	unknown	unknown	gnl\|CDD\|224657
NZ_CP012159.1\|WP_050434144.1\|9169276_9170635_-\|S8-family-peptidase	unknown	unknown	gnl\|CDD\|173793
NZ_CP012159.1\|WP_050434131.1\|9146452_9147118_-\|dihydrofolate-reductase	unknown	unknown	gnl\|CDD\|223340
NZ_CP012159.1\|WP_050434142.1\|9165477_9168915_-\|DUF3883-domain-containing-protein	unknown	unknown	gnl\|CDD\|350769
NZ_CP012159.1\|WP_050434141.1\|9164015_9165485_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|379050
NZ_CP012159.1\|WP_050434146.1\|9172370_9174002_+\|lipopolysaccharide-biosynthesis-protein	unknown	unknown	gnl\|CDD\|225153
NZ_CP012159.1\|WP_050434143.1\|9168911_9169115_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|378935
NZ_CP012159.1\|WP_050434138.1\|9156516_9159414_-\|DUF1156-domain-containing-protein	unknown	unknown	gnl\|CDD\|224657
NZ_CP012159.1\|WP_050434130.1\|9145982_9146417_-\|YciI-family-protein	unknown	unknown	gnl\|CDD\|226318
NZ_CP012159.1\|WP_156339043.1\|9152068_9153094_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050434139.1\|9159550_9161044_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225420
NZ_CP012159.1\|WP_050434134.1\|9150884_9152072_-\|transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP012159.1\|WP_050434137.1\|9155926_9156520_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_156339044.1\|9170853_9171714_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|350180
NZ_CP012159.1\|WP_050434136.1\|9153102_9155913_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|224400
NZ_CP012159.1\|WP_156339042.1\|9148647_9150096_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|350180
NZ_CP012159.1\|WP_050434147.1\|9175995_9177018_+\|endonuclease/exonuclease/phosphatase-family-protein	unknown	unknown	gnl\|CDD\|197318

Protein	Function_ID	Function_description	E-value
NZ_CP012159.1\|WP_050434129.1\|9144793_9145798_-\|NADP-dependent-oxidoreductase	gnl\|CDD\|176191	cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction.	2.67277e-128
NZ_CP012159.1\|WP_050434132.1\|9147549_9147903_-\|DUF2200-domain-containing-protein	gnl\|CDD\|337575	pfam09966, DUF2200, Uncharacterized protein conserved in bacteria (DUF2200). This domain, found in various hypothetical bacterial proteins, has no known function.	4.75071e-75
NZ_CP012159.1\|WP_082363010.1\|9174101_9175856_+\|energy-dependent-translational-throttle-protein-EttA	gnl\|CDD\|236992	PRK11819, PRK11819, putative ABC transporter ATP-binding protein; Reviewed.	0
NZ_CP012159.1\|WP_050434140.1\|9161046_9164019_-\|DUF1156-domain-containing-protein	gnl\|CDD\|224657	COG1743, COG1743, Adenine-specific DNA methylase containing a Zn-ribbon [DNA replication, recombination, and repair].	1.18662e-98
NZ_CP012159.1\|WP_050434144.1\|9169276_9170635_-\|S8-family-peptidase	gnl\|CDD\|173793	cd04847, Peptidases_S8_Subtilisin_like_2, Peptidase S8 family domain in Subtilisin-like proteins. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.	7.54685e-57
NZ_CP012159.1\|WP_050434131.1\|9146452_9147118_-\|dihydrofolate-reductase	gnl\|CDD\|223340	COG0262, FolA, Dihydrofolate reductase [Coenzyme metabolism].	4.63524e-19
NZ_CP012159.1\|WP_050434142.1\|9165477_9168915_-\|DUF3883-domain-containing-protein	gnl\|CDD\|350769	cd18011, DEXDc_RapA, DEXH-box helicase domain of RapA. In bacteria, RapA is an RNA polymerase (RNAP)-associated SWI2/SNF2 (switch/sucrose non-fermentable) protein that mediates RNAP recycling during transcription. The ATPase activity of RapA is stimulated by its interaction with RNAP and inhibited by its N-terminal domain. The conformational changes of RapA and its interaction with RNAP are essential for RNAP recycling. RapA is part of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	4.76507e-67
NZ_CP012159.1\|WP_050434141.1\|9164015_9165485_-\|AAA-family-ATPase	gnl\|CDD\|379050	pfam13175, AAA_15, AAA ATPase domain. This family of domains contain a P-loop motif that is characteristic of the AAA superfamily.	5.8289e-11
NZ_CP012159.1\|WP_050434146.1\|9172370_9174002_+\|lipopolysaccharide-biosynthesis-protein	gnl\|CDD\|225153	COG2244, RfbX, Membrane protein involved in the export of O-antigen and teichoic acid [General function prediction only].	2.24592e-18
NZ_CP012159.1\|WP_050434143.1\|9168911_9169115_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|378935	pfam12728, HTH_17, Helix-turn-helix domain. This domain is a DNA-binding helix-turn-helix domain.	1.39598e-17
NZ_CP012159.1\|WP_050434138.1\|9156516_9159414_-\|DUF1156-domain-containing-protein	gnl\|CDD\|224657	COG1743, COG1743, Adenine-specific DNA methylase containing a Zn-ribbon [DNA replication, recombination, and repair].	5.39311e-109
NZ_CP012159.1\|WP_050434130.1\|9145982_9146417_-\|YciI-family-protein	gnl\|CDD\|226318	COG3795, COG3795, Uncharacterized protein conserved in bacteria [Function unknown].	1.80523e-49
NZ_CP012159.1\|WP_050434139.1\|9159550_9161044_-\|hypothetical-protein	gnl\|CDD\|225420	COG2865, COG2865, Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen [Transcription].	1.44301e-36
NZ_CP012159.1\|WP_050434134.1\|9150884_9152072_-\|transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	5.87615e-11
NZ_CP012159.1\|WP_156339044.1\|9170853_9171714_+\|hypothetical-protein	gnl\|CDD\|350180	cd18793, SF2_C_SNF, C-terminal helicase domain of the SNF family helicases. The Sucrose Non-Fermenting (SNF) family includes chromatin-remodeling factors, such as CHD proteins and SMARCA proteins, recombination proteins Rad54, and many others. They are DEAD-like helicases belonging to superfamily (SF)2, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. Similar to SF1 helicases, SF2 helicases do not form toroidal structures like SF3-6 helicases. Their helicase core consists of two similar protein domains that resemble the fold of the recombination protein RecA. This model describes the C-terminal domain, also called HelicC.	1.13973e-09
NZ_CP012159.1\|WP_050434136.1\|9153102_9155913_-\|ATP-binding-protein	gnl\|CDD\|224400	COG1483, COG1483, Predicted ATPase (AAA+ superfamily) [General function prediction only].	7.86823e-32
NZ_CP012159.1\|WP_156339042.1\|9148647_9150096_-\|hypothetical-protein	gnl\|CDD\|350180	cd18793, SF2_C_SNF, C-terminal helicase domain of the SNF family helicases. The Sucrose Non-Fermenting (SNF) family includes chromatin-remodeling factors, such as CHD proteins and SMARCA proteins, recombination proteins Rad54, and many others. They are DEAD-like helicases belonging to superfamily (SF)2, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. Similar to SF1 helicases, SF2 helicases do not form toroidal structures like SF3-6 helicases. Their helicase core consists of two similar protein domains that resemble the fold of the recombination protein RecA. This model describes the C-terminal domain, also called HelicC.	1.07666e-09
NZ_CP012159.1\|WP_050434147.1\|9175995_9177018_+\|endonuclease/exonuclease/phosphatase-family-protein	gnl\|CDD\|197318	cd09084, EEP-2, Exonuclease-Endonuclease-Phosphatase (EEP) domain superfamily; uncharacterized family 2. This family of uncharacterized proteins belongs to a superfamily that includes the catalytic domain (exonuclease/endonuclease/phosphatase, EEP, domain) of a diverse set of proteins including the ExoIII family of apurinic/apyrimidinic (AP) endonucleases, inositol polyphosphate 5-phosphatases (INPP5), neutral sphingomyelinases (nSMases), deadenylases (such as the vertebrate circadian-clock regulated nocturnin), bacterial cytolethal distending toxin B (CdtB), deoxyribonuclease 1 (DNase1), the endonuclease domain of the non-LTR retrotransposon LINE-1, and related domains. These diverse enzymes share a common catalytic mechanism of cleaving phosphodiester bonds; their substrates range from nucleic acids to phospholipids and perhaps, proteins.	3.7445e-15

>NZ_CP012159.1|WP_050434138.1|9156516_9159414_-|DUF1156-domain-containing-protein
MLATETYPRRLIEVDLPIAQVSEHARNGRSVHHGHITAIHIWWARKPLPSCRAAALAASLIDPLDPACPDAFKAQARDVLGQLYGTPFDGDGEALRRGLLRLVSDFASWQRATDPAFRDAARTLASSAHASLFDGGPSFLADPFCGGGSIPLEGLRLGTTSYASDLNPVATLISKVTLEYVQQFGEQLFSEVTRWGTQIAKQSREELQQFYPVVTGAGAQLPVAYISFRRIQCEGPRCGADVVLTSKFHLSRRGERTIGIKLAGWDGPTPRFEIAEGSLRSFPEPTVRRGAATCLKCGYTIPVERVREQLTARSGGAPSALLVAVALGGASGERSFRAPTHEDHVALAAASKAVAALDRTQGDELPGEPLPPIGTLGFRVQRYGMVRWRDLFTPRQLLTLTTLARLVREAMPDDRTPNGLGVAVRSCLALAVDRLCDYQNTGCSWNPSGSALPHLFTRQALPIIWDYGEANPLASSSGSWSGAVEHVVRGLRNAHVTAGGHGADVGMASASHHPLPTDCAHILITDPPYYDAIPYADLSDFFYVWLRRMLGSDHPELFKTALVPRENEAIVNPVAGKDRDYYRRIMTAALAEARRVTRPDGIGVIIFAHKSTSGWEDLLAAMIDAGWIITASWPIDTENAPRLRARNSAVLGSSIHLVCRPREHRDGRLIVDTVGDWRDILSALPKRIAEWMPRLAREGIVGADAIFACLGPALELFSRYARVEKVSGAIVPLEEYLEQVWATVSREALAMIFDEAETTGLEEDARITAMWLWTLAGPGSSRGSEAGDDEPAGDDENADSEGALAGFSLEYDAARKIAQGLGARLESLDHVVEVKGETARLLAVAERTKYLFGGADAVPAPKRSSKKKQMSLFAELEHAADEQGWGDVGSPKAGATSLDRVHQAMLLFASGRGEALKRFLVQEGVGQGPLFWKLAQSFSALYPSGSDEKRWVDGVLARKKGLGFG
>NZ_CP012159.1|WP_050434137.1|9155926_9156520_-|hypothetical-protein
MSALATKWTSQFFETLGDDRLAADELREASVRSDLARWTSALTSVVVRSFETLGWAAAGKGHRCTVLPVKRNEYLSQDVMAFSTPGEGWRFPLAVCELENSADADLVAYSLWKVLCVRCGLRVVVCYRPDAADGPAFVASLAGEVIEAMPIAERASLAGETLVIVGSRNDAGTFPYGFFQAWKLNSNTGRFERFARQ
>NZ_CP012159.1|WP_050434136.1|9153102_9155913_-|ATP-binding-protein
MAMKPWYKIVTPREDLREGKPLDASEFAVHLDHVRDGRAPAVYQNPAEFFERTFLTKNLSELTAQVVRRLSGVKVETSAIFNLSTQFGGGKTHSLTLLFHLAQNGDASKSWKGVSGILQNAGVTTVPKAATAIFVGTEFDSITGRGGHDGTPLRKTPWGEIAFQLGGEEGFKLVEQHEKELTAPGGDVIERMLPKGKPTLILFDELMNYVSRSRKSGLASQLYTFLHNLSEVARGRDNVVLAVSIPASELEMTAEDQSDFERFKKLLDRLGKAVIMSAEAETSEIIRRRLFEWQGLPKEAIATIEEYEAWLQANKQQLPSWFPVENAREAMKASYPFHPSLLSVFERKWQGLPRFQQTRGVLRLLALWVSKAYAEGYKGAHKDPLISLGTAPLEDPLFRAALFEQLGEARLEPAVTTDIAGKDHAHALRLDTEATPELKKARLHRKVATTILFESNGGQQRGEATLPEVRLAVAEPALDIGNVEQCLEALTDSCYFLAAEKNRYRFSFQPNLNKLLADRRASVSTASIDEVVRKEIQKVFGAGTGLERVYFPKKSNDVPDRALLTLVVLAPENTAPEPATKNLISTMTTESGASSRTFKSALIWIVPEDATTLLEEARKLLAWKDIDADSGELKLDETQQRQLTENTKRAERDLREAVWRAYKNVFLLGDDNSLRKIDLGLVHSSAAGSLVELILARLRQEDIVVEGVSPNFLTRYWPPALPEWSTKSVRDAFYASPKFPRLLKPDAVKDTISRGLDAGTVAYVGKAADGGYEPFVYKRSLGSNDIEIAEDVYLIVRERAEEYVAQKAAPAAPAGATQPVSGGGAAPSGGTANPQPTGILRGVTPTSTTTTATSGTSEPPPSTEIAGFQWTGEISPQKWMNFYTKVLSRFATSGGLKLTVSVDVEPPGGTTVSKVEETKVALRELGLSEDVDLKHR
>NZ_CP012159.1|WP_156339043.1|9152068_9153094_-|hypothetical-protein
MARATNAASQQSVMSVVRWYFDEGRVEGVPFYCDATRIGAFAVEPNELTEGTDAGLFRLFVALAMYQALRDVVIMRQQRSLPRASMRVVADVATVKRSISRHACPTFASVEAFEGGCDVAKNGDDIDCGTCPGAACHVKDATRAFNRMGDMGKLPTSAWLRIWRGGGVKALLDAVRREEQSPTKRAVLLVERFAAVHRVGRKLATMFVSALSTPALAPGLTPWFPEIDGNELVVVDTNVARAVDALCAPGGVKTYDARERWVLEQASRLDLRAFGSDLPAYSPRLLQEALYAFCSKSNRVARGDACAGRGAPCAACAPTLCPFALVVATSRAQHVGEQSTS
>NZ_CP012159.1|WP_050434134.1|9150884_9152072_-|transposase
MSVIDRIKRAAALTLRTVEFGYYHVLLSTVDRVSRLPRNTTVPEAMRLYRENIALKAQLDALEAELAQRTKPAPVPMATRASQVFAYFLTRGDEPFQRYFLSASLSTVKRWATRFRSLFRRRNVGGRPPLDEKVVELIVTLKRENPAWGCRRIREELRRMGIRVSEPTVSRILKENGFSPRPGRKLDFERVRSSAKDALWALDYFAVQTAKGVWLQALLIIDVHTRELIDLRVHDGWDVDSVWTIRMFNEACAREKRSPKAVVHDHGAHFMGQFERQMRVLDIENELTPVGLPSMNCYAERAIGSIRRELLRQIRVADAKELQFFLDEYRRYANTERPHQGIEGRTPEERSQDTPLAELIDLDTVRRRKLERREYAHGLLRGYALAEDVPSAKAA
>NZ_CP012159.1|WP_156339042.1|9148647_9150096_-|hypothetical-protein
MSQSARGLTVEDTADWPRTVRDAYTKLSAGHVSIDLSETGEPFRVPESGVVDDHTRGKMARTAYWYKCLRDGRRRVLDGLPRVNGVELDPDAEHPRILAAVKEIERWTQQREKVLVFGVFLRPLRLLRDVLNVRHALRAVSAGRPIAHAVHSDAALLGIAVRQRERLWDEGALSGRLSMRDVTEMRRALADGHKAYERLRNKVHRRAKQPVASWMGDPSLFGGARRDSALQKALEHHLASFLLEDVLAMRDDAHETLSNNDDVSDERVHELSNIFVEERFRPLLGELDGEDVDEDQAAFRQDALRALLEDDDVRQSFHARLLQGATRWQTRRYLQAAFNRPGASPGVLIAQSQVGREGLNLHESCRVVVQFHAEWNPAVLEQQIGRVDRKGSFWERRARSWLDAGAQGEPPFIEVRQLVFEGTYDAFQWDRVMGRQHHFDASLFGALLPAEAWERVPEVRLRGLREAAPSFQPTLGRVVRST
>NZ_CP012159.1|WP_050434132.1|9147549_9147903_-|DUF2200-domain-containing-protein
MDKKPRIFTTSFGSVYPLYLQKAAKKGRIKEEVDEIITWLTGYTGDQLQRVIDDKVDFEAFFAQAPRMNPNVGLITGVVCGVRVEDVADPLMQKIRYLDKLIDELARGKKMASILRQ
>NZ_CP012159.1|WP_050434131.1|9146452_9147118_-|dihydrofolate-reductase
MSRLRVNAFSISIDGYGAGPDQDLDNPLGVGGNALHTWVLGTRTFQKLHADFAGALIGDQAPRGGVDDDFVARGFENVGAWILGRNMFGPIRGPWTDEAWKGWWGQNPPYHVPVFVLTHHARAPITMEGGTTFHFVTDGIHAALERAKEAASGKDVRVGGGVATIRQYLTAGLIDEMHLAISPVLLGRGEHLLTGIDTVSLGYTCSEHVSTDHATHIVLAK
>NZ_CP012159.1|WP_050434130.1|9145982_9146417_-|YciI-family-protein
MKVMVIVKATEDSEAGNMPSEQLLAEMGKYNEELVKAGVMLAGEGLHPSTKAKRVRFLGDKTTVVDGPFAETKELIAGFWIWQVKSLEEAAEWARRCPGAMPGQESELEIRQIFEAEDFGKEFTPELRAQEERLRDEIERQQKS
>NZ_CP012159.1|WP_050434129.1|9144793_9145798_-|NADP-dependent-oxidoreductase
MRAFLLTRYGGPEVADLRDVTAPEPGPGEVRIDVKAAGLNPVDFKMREGKLRVINSYEFPLVFGCELSGVVASVGEGVTRFRPGDDVFTRVAKEHLGAFAETACVHEDLVAKKPASLDFVHAAAVPLAALTALQALRDELSVTPGMRVFIPGGAGGVGTFAIQIAKHLGATVATTASARGRALVERLGADVVVDYTTQDFTTVLREYDAAFDLIGGDTLLRAFEVVRRGGKIVSIAGLPEPLTATQDLGRGAGLATLFWFASAGIRFRAWRSGVTYRYLFMHPSGKDLEALATLVDAKKLDVIVDRVFPFAEIAEAFAYLEKGRAKGKVVVAIG
>NZ_CP012159.1|WP_050434139.1|9159550_9161044_-|hypothetical-protein
MATKRFDPRKLMELAVDVMVRSTQEPRGDGKASPLVGAVLWNDGVTDTASRSELRDGDHAEFTLLERKHRSDKLDDAVLFSTLEPCAPGARKHPKLSCAERIVLARIKEIWVGVEDPDPTVDRKGIKYLQDSGVKVHIFDRDLQERIRATNRKFIAQAEVRAAAAREGGGKQPASLSEFEGPQRGATLGDLDAAALKEYRATFDKGTRTVAEFHRRLAKQGLLVEQKGKFVPTGFGTLLFGKQPRELLPQAGLLGTITYEDGREEPRDFVGPAIEAPDQAIAWLKDKLPNPITRTSAKRKEVRETFYELLREGIVNALVHRDYAIKGAKCQLIASPHKVVVMSPGAPVEPITMKQLEAFDAPMLSRNPVMHFVFGKMKLAEERGLGLRSMRERASAAGLPLPSYTYKGPYVVLTMYPDAASVTADVSDNKALTELSAAERVGWAWLVTRERATSPEYQEALELPNRTALNHLKRMTELGLLRRVGAGRATYYEVVRP
>NZ_CP012159.1|WP_050434140.1|9161046_9164019_-|DUF1156-domain-containing-protein
MSALNLHSPKRLIEVDLPIRRISEHARREKSIRHGHLSTLHLWWARRPLGACRAVLCASLWPAPTDGDCPPAFITEARRLVHAWATDNAGKSSPESFSRLVRIQKNPEILADAGELQRALLDFIADFANWDNSTDQAYLRTARALTASAHQALSGGSARPVVVDPFAGGGSIPLEALRVGADAFASDLNPIPVLLNRVLLEYVPKFGADLATELRRAASRLRERALADVRDVYPPESEGGVPAAYLWARTARCEGPGCGYLVPLQRSPLISGKAKPRSIVELRPDAKRLTFDCAVVELSASARVPDGTVKRGALCCPACGYTTPADRVRAQFKGRRSGARDAQLLAVVVSDPRTTGRRFRSPTPYDLDAVAIAQGRLNVLPAIDGLPAVPDEPLPYLRSIFNIHLLDATTWGDLFTARQALTLSTLARHCPEACEPIKDMELRQAVQTCVALLVDRCADYWSSLARWVGEFVANTFGRQALGIIWDFAEVYPFSDSSGNFDGALEWIVRVIEREALSQSPTGSAVAASATAHPLPDDSAALVFTDPPYYDAVPYADLSDFFFVWLKRSLRRVHPDLLAPRLTEKRGEIVQLAERNKDYAFKTREYFETEMRKAMADARRVLAPSGLGVVVFAHKTTVGWETQLQAMIDAGWILTASWPIDTERPGRLRANNAAALASSVHLVCRPRENPDGTAREGDVGSWREILAELPVRIHEWMPRLAAEGVVGADAIFACLGPALEVFSRYSHVEKASGERVLLREYLEQVWACVSREALATVLRDSDAGALEPDARVSVMMLWTLGGRGGDDGPPEEVAPDVDGDDEDEAGSKASGTGFVLEYDATRKIAQGLGARLDELQQVVEIKGDKARLLGAIERTGHLFGRTEGVPTAKKAAKKKQMTLFGDLDQAAEAQGWGEVGAPKAATTTLDRVHQAMLLFGSGRGEALKRFIVEEGVGKQPQFWKLAQSLSALYPGGTDEKRWVDGVLARKKGLGF
>NZ_CP012159.1|WP_050434141.1|9164015_9165485_-|AAA-family-ATPase
MADPRNTLQSKFVSNHRHANFGNVLTHLHVHGFRLHSGSNLEFRSPITAFCGPNGTGKTTLLQLAACSYRQGDKGFQLRDFFALGALDPTPFKADAKLTIGTWQADAKTREITLTRRTSRWSDYRRRDEREVLFLGAAEFPPRAEEQGFAFRQAGRLVVATRTPCSSNVTTSVGKVLGTHYDRVERAGVSLKARSGTILAAGRGSLSYSENHMGFGECRVHNLIDRLEAQSSKSLILLEEPEISLHQSAQFRFGEYLVDLALRNGHQILLSTHSEHLLRALPQVSRILIVRDNTSGVRVLPGLASAQVASVLTDGHDKALRVLVEDDVAAAILAEALAKAEPELLKTTAIVIGGYRDEKDQSVGGGKEAITAAMKTLRDSGLRIAAVLDADAKKDSKNFVFKLPGTMPPEKEVFANSAVKALWASTYSLDVDSFLAELVGVDHHGWFDRLADRVTRDRAFLVGEACRAYAASISFDPLVELLREAASKK
>NZ_CP012159.1|WP_050434142.1|9165477_9168915_-|DUF3883-domain-containing-protein
MKLDDLKRGIIVRGPMLPEPVEVLVVTPLGDAVKVVGSGQKTGQTHNRVLHAQQLALLEASPQSEPFDGEPLHFKLGVEAARLGLAYEYDPYFSLSIARVDPLPHQLEAVYDYFLKLPRIRFLLADDPGAGKTIMAGLLLKELKIRGLAKRTLIVAPANLTFQWQRELKDKFREQFDVMRGEVLRTQYGQNPWQEHNQVVTSVSWISRVEDAKESLLRSQWDLVIVDEAHKMSAYSADKKTLAFQIGEALSQRTDHFLLMTATPHKGDPENFRLFLSLLDPDVYGDVKSLEEAMRRHEAPFYLRRLKEALVAFPDPETGEVKKLFTNRDVRTTKFELDGEEFDFYDALTRYVEDQSIKAAAAENVQANILGFQMAMLQRRFASSMYAVRRSLERMRDKRRKILDDPESYRQQQIDRKLPEDFDDLPEDEQAKIMQSAEETVLIVDPIALREEIQRLDKLVELARALEKREVESKLVKLKQVLSEQQIFSDPRMKLLVFTEHKDTLDYLAGDGKDGRPLGKLREWGLTCTQIHGGMPIGDRDTPNTRIYAEREFREDAQVLVATEAAGEGINLQFCWLMINYDIPWNPVRLEQRMGRIHRYGQQKDCLIFNFAAVNTREGRVLEKLLMRLAEIKDELGTDKVFDVVGEMLPSNALEKMFREMYAKRLDVTDISDRIVKDIDPERFKRITGSTLEGLAKKELNLSALVGKSVEAKERRLVPEVIEDFFKTAGPIAGVHPSPVRGKDHVYKVGKVPKTLTTIGERLEPRFGKLGREYQRVVFDKRLLGDDATLEWVTPGHPLFEVVRSDVTDRVDDDLRRGAVLWDLHAKTPYRLDVYAASIKDGRGNTLHKKLFVVRAEVDGTLSLRQPTLFLDLIPSTKGTKAPEVPGLPERDLVEVHLVQNALTPFLAEVQGPRTKENSVVREHIEISLNTLIDKQQIKLGEQLERRVEGQVIPAIEGNIKQAEDHLDELNARLERRRHELEMERHCMIGDVQHLGRAWVLPHPDREAPNIAPMVSDPVIEKIAVQVAIDHERALGWVVESVENENRGYDLLSKRPHPSEPGVFVQARFIEVKGRSGTGEVALTANEYRTAQRLGDDYHLYVVFDCATTPKLNTIQNPAKLGWEPVVKVEHYHVTAKAILEASRG
>NZ_CP012159.1|WP_050434143.1|9168911_9169115_-|helix-turn-helix-domain-containing-protein
MTDEILTLPEVAQLLKVAEKTVYTMAQKGELPAFKVRGQWRFKRVDLDQWIEQQKAASARDDEGGEP
>NZ_CP012159.1|WP_050434144.1|9169276_9170635_-|S8-family-peptidase
MEPAGLGASVGAFEEHGLGVTTAFLFGPLASGQAPAPPLCAVDHVRVLDDKTGTATDPDYFDVLDRIVGHLDKNPGLYSYVNISLGPSLAVDDDEVTLWTAALDKRFAHGKCVATVAAGNDGALDEATGLNRIQPPADGVNVLSVGAADRRGNDWGRAGYSCVGPGRSPGIVKPDGVAFGGSDDEPFGILTPQLRGGHTHGTSFAAPFALRSAASIGAQLGTRLGPLAIRALLIHRAHTEEHHELKHVGWGRFEADPLQLVTCDDDETLVVFQGELPVGEHLRAPVPISNVTLEGDVHLAASLVIAPEVDPEHPGTYTRSGLEVAFRPHSAKFTKPKEGAKPAKHAKTRSFFSPANLYGQSETALREDGHKWEPCLHHEERLRSSSLADPCFDIYYHHRESGMKVVDPQPIPYAFVVSLKAPKVKDLYNRVVRAYAQQLVPLRPQTRIQVRT
>NZ_CP012159.1|WP_156339044.1|9170853_9171714_+|hypothetical-protein
MRRALADSHKAYERLRDKVRRRAKKPVVAWRADPALLGGAPVDRELESALEDHLVSFVLDDFLATTSDSDEVTDERFDALTVEFVEERLRPLLGELGDEDADEEQAVLRQQALRALLEDDDGRQSFHARLLQGATRWETRRYLQAAFNRPGASPWVLIAQSQVGREGLNLHESCRVVVQFHAEWNPAVLEQQIGRVDRKGSLWEQRARKWLEDGAQGEPPFVEVRQLIFEGTYDAFQWDRVMRRQHVFDASLFGSLLPAEAWDRLPEGRLGELLAAAPSFRPPRSK
>NZ_CP012159.1|WP_050434146.1|9172370_9174002_+|lipopolysaccharide-biosynthesis-protein
MPPPPPSATTRPVPRAEPPPPSPSPASSPPPAPSPTTARAAGRGGLAIAVAKVSFILFGFIQQLLLPWLLGVDGYGALSIVLADVSVVNNVIVATGIQGVSRAVASAPPGEVQHAFARALRLHAALAVAVATAFFFAAPHIAAFVKAPHVTLPLQVTSGVILLYGTYAPLVGALNGQRRFIPQAALDIAYGAIRLLAIAAGAILFIRAGHSGVLGATAGFVTAAAIIVPIALLTTGIGKPGHGGTSARDHLAYLLPLAVSQAFLNLLMQTDLNLFRRTVGQAATDLALTGQAADALTGAYRGMQLFSFLPYQLLMSVSFILFPLLAQAHAGGDTDAVRRYTRTGVRIAMLLTGLLCAPIAGLGPHVLRMAFPEEIWTQGGTALRVHALGMGAFAILGIFCAALTSLRRERWTATLTGIAVALVAMGCLYAVPRAPFGPQMLLHSALATGAALTLAALVAAALVRFLVGEVVALAVPLRVVAAVAITIALGTQLPWLGKLLVPLEAALLGAIYLALLTLFGEIGRADLALVKQAFGRRSASRPA
>NZ_CP012159.1|WP_082363010.1|9174101_9175856_+|energy-dependent-translational-throttle-protein-EttA
MGAPGRTRRRAAQHRLRAAKGRRSDVAPQFIFTMQDVRKVHPPNKEVLKGLWLSFYPGAKIGVLGGNGAGKSTLLRIMAGVDKDYLGEAKAAEGTRIGFLQQEPQLEAGKTVRESVDAAVSATRGLLTRFEEIGAKLGEDPPDMEALLEEYAVLQDKIDASNAWEIDRVIERAMDALKLPPPEALVDHLSGGERRRVALCRLLLEKPDILLLDEPTNHLDAESVAWLERFLGDYEGTVVAVTHDRYFLDNVAGWILELDRGQGIPYEGNYSGWLEQKKKRLESEQKQDSARKRTLERELEWVRMAPRARQAKSKARLAAYESLLAEDQKASKGPEITEIHIPAGPRLGNNVIEAKSLRKAFGDRLLIDDLNFALPRGGIVGIIGPNGAGKTTLFRMIMGLEQPDAGELLIGETVQLAYVDQSRDALKATNNVWQEISGGEEKILVGKREVPSRAYVSSFNFAGSDQQKKVGDLSGGERNRVHLAKLLQRGGNVLLLDEPTNDLDVDTLRALEEALLNFAGCAVVISHDRWFLDRIATHILAFEGDAKVVWFQGNYQDYEADLKRRLGAKADEPRKFRYRKLTSG
>NZ_CP012159.1|WP_050434147.1|9175995_9177018_+|endonuclease/exonuclease/phosphatase-family-protein
MLRFSSRRTAGLLLTFALLTAGGCRVEVGGQPAGSTSTATSGDGGAGAMGGGGGDGGSGATGPVVTEPLKVLNWNTQNFFDDQKNSNASAEIVVSTTNYRAQRAAVGAVLRQLDPDVAVLQEVENLRILRELNEDELGGAYPHHALIPSNDIRGINIGTLSKVPIDRTVSHKDDMFTKVGTNGPNYRFARDAVEVHITHAGRHVVLLGVHFISKASQSNEDKREAEAQRARAIADEIAAADPTAAIAVLGDYNDLPESPTVRAVEGSGSGAFENIGMLVPSADRWTYNYQGTLEKVDHQIVNPILRGMLQPDSPRILHSGEVDDASDHAPVMATYTVSAP

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Crispr_ID: NZ_CP012159_40

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012159_40

9308393-9308582

Orphan

Consensus_repeat	Method
CGCCNACGTACCCAGTTTCGCTC	CRT

4 spacers

The CRISPR arrays of NZ_CP012159_40

>merge|NZ_CP012159|40|9308393-9308582|CRT
CGCCGACGTACCCAGTTTCGCTCCTGAACTGCGACCGTCGGGGCGCCAACGTACCCGGTTTCGGCGTCACGTCCGTGGGCAGGCCGCCGACGTACCCAGTTTCGCTCGGAGAGCAGGTCTGGCCACGCCGACGTACCCAGTTTCGCTCGGAGAGTGGGTGTGTCGGGCGCCAACGACCCCAGTTTCGCTC

>NZ_CP012159|40|12|9308393-9308582|CRT
CGCCGACGTACCCAGTTTCGCTC	CTGAACTGCGACCGTCGGGG
CGCCAACGTACCCGGTTTCGGCG	TCACGTCCGTGGGCAGGC
CGCCGACGTACCCAGTTTCGCTC	GGAGAGCAGGTCTGGCCA
CGCCGACGTACCCAGTTTCGCTC	GGAGAGTGGGTGTGTCGGG
CGCCAACGACCCCAGTTTCGCTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012159.1\|WP_050434224.1\|9300260_9301154_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236081
NZ_CP012159.1\|WP_050434228.1\|9304583_9304859_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_082363027.1\|9305011_9306970_-\|aldehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|223944
NZ_CP012159.1\|WP_050434223.1\|9294312_9295521_+\|cytochrome-P450	unknown	unknown	gnl\|CDD\|225035
NZ_CP012159.1\|WP_050434238.1\|9319722_9321198_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_082363571.1\|9312653_9313403_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226755
NZ_CP012159.1\|WP_156339058.1\|9308148_9308319_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_179955494.1\|9318626_9319718_-\|RluA-family-pseudouridine-synthase	unknown	unknown	gnl\|CDD\|223638
NZ_CP012159.1\|WP_050434230.1\|9308888_9310892_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_082363028.1\|9313504_9315844_+\|CapA-family-protein	unknown	unknown	gnl\|CDD\|277327
NZ_CP012159.1\|WP_050434227.1\|9303574_9304171_-\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|99749
NZ_CP012159.1\|WP_050434226.1\|9302557_9303511_+\|Grx4-family-monothiol-glutaredoxin	unknown	unknown	gnl\|CDD\|188046
NZ_CP012159.1\|WP_050436284.1\|9295543_9300205_-\|sigma-54-dependent-Fis-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225114
NZ_CP012159.1\|WP_169796406.1\|9307111_9308035_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|370676
NZ_CP012159.1\|WP_050434232.1\|9311310_9312147_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050434225.1\|9301373_9302561_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|366166
NZ_CP012159.1\|WP_050434231.1\|9311053_9311314_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_169796736.1\|9315851_9316766_+\|M23-family-metallopeptidase	unknown	unknown	gnl\|CDD\|366703
NZ_CP012159.1\|WP_050434233.1\|9312280_9312577_+\|DUF2288-family-protein	unknown	unknown	gnl\|CDD\|370797
NZ_CP012159.1\|WP_050434237.1\|9316784_9318290_-\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|270916

Protein	Function_ID	Function_description	E-value
NZ_CP012159.1\|WP_050434224.1\|9300260_9301154_-\|hypothetical-protein	gnl\|CDD\|236081	PRK07735, PRK07735, NADH-quinone oxidoreductase subunit C.	0.000330873
NZ_CP012159.1\|WP_179955494.1\|9318626_9319718_-\|RluA-family-pseudouridine-synthase	gnl\|CDD\|223638	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis].	3.04351e-62
NZ_CP012159.1\|WP_082363027.1\|9305011_9306970_-\|aldehyde-dehydrogenase	gnl\|CDD\|223944	COG1012, PutA, NAD-dependent aldehyde dehydrogenases [Energy production and conversion].	5.88818e-10
NZ_CP012159.1\|WP_050434223.1\|9294312_9295521_+\|cytochrome-P450	gnl\|CDD\|225035	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism].	3.98458e-93
NZ_CP012159.1\|WP_082363571.1\|9312653_9313403_+\|hypothetical-protein	gnl\|CDD\|226755	COG4305, COG4305, Endoglucanase C-terminal domain/subunit and related proteins [Carbohydrate transport and metabolism].	5.97137e-45
NZ_CP012159.1\|WP_050434233.1\|9312280_9312577_+\|DUF2288-family-protein	gnl\|CDD\|370797	pfam10052, DUF2288, Protein of unknown function (DUF2288). Members of this family of hypothetical bacterial proteins have no known function.	2.07354e-25
NZ_CP012159.1\|WP_082363028.1\|9313504_9315844_+\|CapA-family-protein	gnl\|CDD\|277327	cd07381, MPP_CapA, CapA and related proteins, metallophosphatase domain. CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	9.25658e-52
NZ_CP012159.1\|WP_050434227.1\|9303574_9304171_-\|Uma2-family-endonuclease	gnl\|CDD\|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	2.87175e-36
NZ_CP012159.1\|WP_050434226.1\|9302557_9303511_+\|Grx4-family-monothiol-glutaredoxin	gnl\|CDD\|188046	TIGR00365, TIGR00365, monothiol glutaredoxin, Grx4 family. The gene for the member of this glutaredoxin family in E. coli, originally designated ydhD, is now designated grxD. Its protein, Grx4, is a monothiol glutaredoxin similar to Grx5 of yeast, which is involved in iron-sulfur cluster formation. [Energy metabolism, Electron transport].	7.19681e-55
NZ_CP012159.1\|WP_050436284.1\|9295543_9300205_-\|sigma-54-dependent-Fis-family-transcriptional-regulator	gnl\|CDD\|225114	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms].	2.90397e-122
NZ_CP012159.1\|WP_169796406.1\|9307111_9308035_+\|hypothetical-protein	gnl\|CDD\|370676	pfam09770, PAT1, Topoisomerase II-associated protein PAT1. Members of this family are necessary for accurate chromosome transmission during cell division.	8.68138e-08
NZ_CP012159.1\|WP_169796736.1\|9315851_9316766_+\|M23-family-metallopeptidase	gnl\|CDD\|366703	pfam01551, Peptidase_M23, Peptidase family M23. Members of this family are zinc metallopeptidases with a range of specificities. The peptidase family M23 is included in this family, these are Gly-Gly endopeptidases. Peptidase family M23 are also endopeptidases. This family also includes some bacterial lipoproteins for which no proteolytic activity has been demonstrated. This family also includes leukocyte cell-derived chemotaxin 2 (LECT2) proteins. LECT2 is a liver-specific protein which is thought to be linked to hepatocyte growth although the exact function of this protein is unknown.	3.91435e-24
NZ_CP012159.1\|WP_050434225.1\|9301373_9302561_+\|alpha/beta-hydrolase	gnl\|CDD\|366166	pfam00561, Abhydrolase_1, alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes.	5.38109e-23
NZ_CP012159.1\|WP_050434237.1\|9316784_9318290_-\|serine/threonine-protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	5.79008e-101

>NZ_CP012159.1|WP_156339058.1|9308148_9308319_+|hypothetical-protein
MDLKLGIPVWLLCGILGAWIATTKGRGGCFWFLLCAVLGPIGVIVAAVISRNEPRS
>NZ_CP012159.1|WP_169796406.1|9307111_9308035_+|hypothetical-protein
MPCRWFFAAGVLASVAVSSSVALAQDGEDLPPGYQQSQGYGQRPQGYGQQPPPGYGQQPHGYGQQPHGYGQQPHGYGQQPPPGYGPPPPGYGQPPPGYGYGQPGYGPPPPGYGHHPGYGQPVAGPPPPPPPPKRTCCNWSIRYNPFDLLLGKMTFEGELAVIGPITLGIEPAWIWGAPFSEIVDRSGFSIAGTVGVYVSGTPLRGFWLKGYLGYERFEATATHERDSSATASRSIGSGIAGGMLGSTSVFGRNGGFAISGGIGIGVALADSQRLTVNSDFYGPQSVMFYDKTSKLQLLGSLGIGVAF
>NZ_CP012159.1|WP_082363027.1|9305011_9306970_-|aldehyde-dehydrogenase
MSSPLDPASSLAGVAPVPATPAAAHPSSSAPVASEAPAFPGEGAPPVSSVSEGAPPASSVSEGAADVVSPPETSIADLDRAAETLAGAATAFARMSPGEKATLLRSLIPGTLAVAEAQVAMACRAKGLDPAGPQAGEEWLAGPSLTLSNLRRLAESLEDIQRRGRPRLGRGGVRTRKDGRVEVNLFPVGAQDALLYKGVRVHALLKPGATAASVRAEQAAFYQQRDPEGGVTLLLGAGNVASIPPMDALHALFVEGRVVLLKMSPVNAYLGPFLEKAFAPLVERGFLRVVYGGAEVGAHLAAHPAITHMHITGSAETHDRIVWGPPGPEQARRRAAGEPVFTKPVSSELGNVSPVIVLPHLYDEDELWFQARSIATQVINNASFNCNAAKMLVLPRGFAQRPLLLSMLARAFAAVAPRRAYYPGAHDRHARLTAGRATLGPEVLSAPPEIPLPSGVVRFGEPGADALPWTLVIGLDAADPAEPLFQQEPFCSILSVVELGSSDPVQFLAEATRFCNERLWGTLSASLVVHPLSEEDPAVADAVDRALLALRYGAIAVNQWPAMVYGAVTPPWGGHPSATLADVQSGLGFVHNTQMVAGVEKVILRAPLRGFPRPPYFYDHRRAHLVGARLATWSATPGWGRAWSVAAAAFKG
>NZ_CP012159.1|WP_050434228.1|9304583_9304859_+|hypothetical-protein
MSQATEETKSEIQKGLASLYTLRDEIRVRLHLAGMEVKDVWNKTLEPQLLDAEKFAEEVTETSKEKLDALVTRMKEFQASLGESKDDTQKH
>NZ_CP012159.1|WP_050434227.1|9303574_9304171_-|Uma2-family-endonuclease
MGEPAIKRPGPVTFDDLDAVPPHMVGEIISGTLYMSPRPAPKHALASSNLGAWLVRPFQFGLDGPGGWWILDEPELHLGQDALVPDLAGWCVERMPDLPETAYFPVAPDWVCEVLSPTTAMDDRLDKLPIYAREGVKWVWFVDPIKRAMEIHRLDARNRWETASMLRGDAVVRAAPFDAIELPLSILWKRTAAAGRKG
>NZ_CP012159.1|WP_050434226.1|9302557_9303511_+|Grx4-family-monothiol-glutaredoxin
MTLSESLRAKLTEIIGSDDVVLFMKGSRRMPQCGFSSTVVQILDGHLPKYTTVNVLSDPEIRDGIKQFSNWPTIPQLYVKGEFLGGCDIVREMQASGELAQKLAGVKGTAPAATGPATPPNVKVSDSAAKALKSALEAEGEGQEVHIEIGTGYEYGLYVGPRAPGDVEAKANGITLLFDAGSARRAEGLSIDFIVGEGDGGGFRLESPSEPPRVRQLSPADLKKMQERGDKFELFDVRTPRERATASITGARLLDEETLRHIEGLPKDTLLVFHCHHGGRSQAAAERFLAQGYHQVFNLKGGIDAWSLTVDPSVPRY
>NZ_CP012159.1|WP_050434225.1|9301373_9302561_+|alpha/beta-hydrolase
MILNHAQVEQVVDRDERGKFVKELVVTRLRTTALTHDARRPSTIPPPAMMEDLPPRARGRVRDIPLAMVRKRSMAHGGGSLAPVLLIHGYGQNRYTWHLPSRSFSNYLARAGFDVYNLDLRGHGRSKHLGAPRPSHVTDFVLEDVPAALEEIRRCSGDRPVYLVGHSLGGLVGYAAATVMRDAVAGVCTLGSPYLFAKGSWTLTALGELMLSVDRRVSFGDGALGLKPLGEAMRFARAFIESPLFPLPIRGFAPGSMEPKVLAQHMSLSMDNGSITVLRNMFLDAAAARQHGHRLGSLYGYAERFERLDIPLLIIAGTKDDIAPPASVRPAYDFSRSSDRTYRAFPRGHLDIVMGKDAPLTIWPLVEAWLRGRVRRAAVPDDRYRPDMGRGSSQV
>NZ_CP012159.1|WP_050434224.1|9300260_9301154_-|hypothetical-protein
MLRPLKAGAFALAALLASLSSAGAAWAQQDEPEKAADGAEASDKDAKGDDASGDEAGGKKDEVPSEAPASDNDPYEKPHQAYRFIGMRFRNLIVPQFILNLFADGGRTVNVFTFGPEFSTRKDGLELDFALSYADYSMGDTLFKGKSDDDNAFEIINSSMKMVYFTTDLLYEIPLDKEKGRFSLLVGGGIGLGVVFGDLRRNQATPNDPNNINRDDVSAWRRCPGPGTQFCDDANDHYGDYREASWFNGGSKPVVFPWISLPQISFRYKPVKQLQLRADLGFSISGFYFGASAAYGL
>NZ_CP012159.1|WP_050436284.1|9295543_9300205_-|sigma-54-dependent-Fis-family-transcriptional-regulator
MTGSSGPRLPLRYEPLAALGKGGAGEVWAVRDRISGRTVALKALGEGGDEREVMALVREATALSGVEGLGVPRVLRFGRLPESGRPYLVRELVVGTSLADLLEGKAGEAEARLLDPKVWLAAIADAADQLTRLHRALLLHGDVKPANLIVGPDGRATLVDLGLAAPWRDGGVRPEGLTPRYAAPELLEGAPLTVRVEVFALGVTLKEALISAGERLPGATRRALDAVAARATAENPADRYPSTDELGSALRGAAGLSERPPSGVGEEDGASVWPVLGLDGPSGRLLSRIEGMREGGGLLITGPPGSGRSALLRRIAWSLGVAGRAVAWIEAARVNDLAEALAIELSAQGTGREEGRRRTHGIVLVDDAERLGSEALAWLDTEREAGSKLVLVLGVAPSAGQGLPGRTFEIFPMEPLELQVALSLVQRGIPSLSDAVARHVVERSGGWPGNIRRIVARLAGAPVASIADVDRLLAESAVTGGGERDATGDPSRRPLDEIHDLLDRGHFDEAGEALVAWREDRAPEVVIVRARLLTNVGQSVQALSELASVGEEVDRSGDLELSGSWSLNVARALLRTGDYPATERRAGEVPERLGVAVGDEAEALITERGRRLLCEAAALQGLAQSYSARHEEARSTLERSVVLARRTANPRSLSLALGSLAFALQRSERLGEAKEAYEEALGAAEQAGDAGTMATTRLNLAGIAKSQGDLAAAIRHLEAAVDMGRRSGRVITIRQALLNLANLDLYLGRIAKAKVAIDALVADRGSMPPYQRAQLLALEAEHAARSGDVAGAASLCLSCAEAYEAMGLRVDAAEARLERVLLAVGLPGAEARSVLEEVEAAATALGSSGAHRAALALARGRTAALARDEDRARASYEEALKAATVAGQRDWIWRALAARAELEDESGQPLRARRDREAALETLEEISARLPRDLREVFWNDPRRRELRAAARVALSNAVTLSAAPVGGGGEDRLARVLEINRAIAGEHDLERLLEKVTDHAIALLRAERGFVILRSGYARRGGGASSSSVSTSSVSTSVPPVGADGDLSIHASRDQAGDDPHARFSRSIAERVLLSGEPVVTASARNDARMADYVSVHQLMLQSVACVPIRARSGAVIGALYLETRLRPTASFDGELPTLIALADQVAIAIDTARLVGENRRRAEELSRVNEELVAARAKLEELLGQRTAELVKTRRDLRSARAVLRGHFGYEGLVGTSDAMRRLYALIDRVKDADIPVLITGESGTGKEVVARTLHEKSPRGKKPFLGINCGAIPEHLLESELFGHVRGAFTGADRDRKGLFREATEGTLLLDEIGEMPPKMQAGLLRVLQERVVRPVGGAREERVDTRVIAATHRSLAEMVEAGTFREDLYYRLHVVELRLPSLRERLDDVPLLIDHFLGIFAARHGRERGSVSRAALARLMDYRWPGNVRQLENVLLNAWVLSDRSELDVDDFELPDAPPRSSRSFGSRGGPPPSWGEGQPSSRGGARAGGSAPASSGEAATPLERHRNDERERILAALEECNWNRVKAAQIVGLPRRTFYRRLKEYGIQ
>NZ_CP012159.1|WP_050434223.1|9294312_9295521_+|cytochrome-P450
MELADIRIADPDLYLTGVPHDRFERLRREAPVFWHEEEGGTGFWAITRHADAIQVISDAKRFSSARGGIWLEDYPPDDLRSNRDGLITLDPPRQTRYRGLVSKGFVPRLMQAIEPHAREIVTAMIDRVEERGSGDFVSELAGDLPLRIILQLLGIPLEDRAQVAAWAYQFLLAADKPKEEVEALVRDLVGYAARLAEERRASPRDDMLSVLMEGELDGEKLSSFEFGLFFSLLLSAGTVTTHQLIAQGMLTLLERPETQRRLEEDPSLIPSAVEEMLRFVPSVGYMRRTATCDTEIQGQRIAEGDKVVAWLVSANRDEEVFPDAQTFDVTRSPNEHLSFGRGPHFCLGATLARLEARVAFEEILRRLPGMQLAGPVQRMRSNWLMGLTHLPVRWSPSLRARP
>NZ_CP012159.1|WP_050434230.1|9308888_9310892_+|hypothetical-protein
MLPGLPPRHDRQIQRRFADLPGHPDLPGLAGVKNATGWAAKTLVLVVALAIVALPRAAWAWVEVHVAGDETRLTVEPSGSTRVQHKVTLKINGGPLRAFDVRGVDADAAPEADAYVVPLRDAQRNSLASASPVALEMLPRERPREDGSAPPPVLRVRFDGKGLGRGVYVLFFRYRTDLAQQGALREDGVLTRLSWSGPVWDDGLDTLRLIFQLPAAPTEPRVDEGATTHDDEPGVVPPTTLSTVRRGREFDELELVRPYAPKGEAVRWSVLADTRAFRPAMPVAEAAPTLPQRALDAATTWTPDRQRSLYVVAAVALFALFTALTARKVREVEQACEGAEVKPRPLIPMPILLRAPLAGAALVAGVGLEMTLKSGTLGAALVALATALIAHRTPKLRTGGASGSGATLRGPGRWLPVAEAEAFRSPPRPRGGWLDVSTRAGKGLFAVMVLALAVGVGAVYQHSPYHAQLLAMNVVVLLAIFCTGRLSELPPDPAASPIPLLRDISRRIKRSLKGTEARVVGRIRVPEGTPDADEIRLGLAPRAALPGFVGIEVGVVYAPGAGGAVALPEVLLRVTVGSPCEQAVEKLAASGRSVRGRRPDERVLAFTPRLPTARMTAAIAAALARSVVAREVASKETKPAKRSRKASAETTQGAPVRDAKKAVPVAA
>NZ_CP012159.1|WP_050434231.1|9311053_9311314_+|hypothetical-protein
MVEPGTQCPNPIADSIAARLAVYLGPHTARTAVKTFSLKALGRGPDTLTAADVPRLADALRPVLRTFVGRAQAEVIVERIAKKSGS
>NZ_CP012159.1|WP_050434232.1|9311310_9312147_+|hypothetical-protein
MIFRLLVALPLLLVLLLAGVSTLLPDPSSRATLMMWAQEGGKALGVAGALAAALAFERGDYLRRAWGLQAAYMLLILRDAVLMRLPPGTEILGLSVKAWDGGVVALANMAGVAAAWMMARAWEEAGFEMPAPRSRKILVGGAALVLALVFMGKPLAKDVQALLAGDYAEITAVISSVADMLATSLIAPVLLTVLAMRGGVLAWPWGMFTASMVCWLFFDAASLILGVESRHSGTWEYVARDSFRVLACLYACAAGLAQRAAISPPQLADDGELEPVEG
>NZ_CP012159.1|WP_050434233.1|9312280_9312577_+|DUF2288-family-protein
MREELGRSMGEVLWSDLQAHVQRDAVIVLDEDLDLLDAAIAFATNEVAKVEPWIDSGKIAKPTAEELSRWSSDEAMRFLCVIVAPFVLVRRPRAAAPS
>NZ_CP012159.1|WP_082363571.1|9312653_9313403_+|hypothetical-protein
MCVGLLAACGDDDGDTGSQGATGEGAASAGSGAGSAGSGAGPGGGCALESATHAGEGTYYDADGSGNCSFPPSPGDLLVAAMNQADYEGSAACGACIALDGPDGSVTVRIVDRCPECAPGDVDMSPQAFEQIAPIAAGRVPITWRYVACGLTGAVVYHFKDGSNPWWAGVQVRNHRYPIAELSFRNADGQFVPLGRENYNYFIGENMGEGPFTFRVTDTLGNVIEDEGIPLRDDGESPGTSQFPACPEN
>NZ_CP012159.1|WP_082363028.1|9313504_9315844_+|CapA-family-protein
MPVLPLQRSLCPSQRRLERTRPFVAPVLAALAVASTIAAVPAVASAQYAFNESEANFDLLYAATPIALTGLVLDEAGAPVAGAIVTTVGWGVAESNEGLTATTDASGAFAFPTLSRRSVLLKVERTNYYAEIVPVDLQRPLAEDDADAGDIVLTQKKAGRARLIFGGDTMLGRRFTDANGDGIEGEPGDLIRPTARAEDAIAVTRFIADALGAADYTTVNLETPATAYPEQPHPFKSFSFYSHPETLAGLVAAGVDGVSLGNNHVYDYLDPGLLDTLMETSDAGLDWCGAGMDETEARGSVIYRTVGQGVQIALQGFNQLVNDGTTHPLYSLVARDSPQVKGGALEMSAANVTGFVSAEASERAAIPMLHGGTEYSDYPSATIRTRMIQAAQQGAALVVAHHPHEVQGVGVVTTNRGPRLVLMSLGNLIFDQDVFETFQSYIAVVDIDQSSPGVQTVRKMQLVPIHIEGYVPKLVSGAWLDRAGREVGHLSTTLPVVASGPNPSDGLSGAVVFPSGNRVLVASGAAGYATSEEVTQLNAPLTTGATPTLEYVRMEQADSLARVQTSTAMSCQVGREISLYGDFEDLDVDDVFSEGTMWDQTSARFVQNSVTRSGTGALVLLRQSSNSGNASSWMRNRIKVPGNQALTLRGWVKGNNSGQFQVQVYWYTSSGATVSSPTVFTRGAGTYDWESFSVNLTAPANSASIRAYYRSLPPAAGEGATFVDDVSLVQWESSMPNAASGWNLPTPNAWGFVRCTGGSGNQATISLTHRMYSATSMLP
>NZ_CP012159.1|WP_169796736.1|9315851_9316766_+|M23-family-metallopeptidase
MRWSSPPHWLARWNVGVVAAMAFGTVVAGCGPGDEVVWPVGGDAQRLSSTFGPRLQVGRNMSYDFHRGIDIPAEEGTSVLAIAKGVVKRAGDDPAYSDTMVQVEHCDGADCYYSNYLHLSEACVEVGDEVSAGEVVGHSGIAESGFPHLHFEIREGRSEQAYAVHPLRWLPGLRWAAPTVAILSVDDPGSGRVAVQVEVGTIGVDPALLRVEVTTHDRTSGETLDEKVFDVEEWNRKYTLSDTPKQIDEPELDGIRLEPAAFTQGAPAYGLRIRFSRLNGASRDLGVTVKAIDTYGASSEASLP
>NZ_CP012159.1|WP_050434237.1|9316784_9318290_-|serine/threonine-protein-kinase
MSGPWTSPVPIGTLIAGKYRVDHVLGVGGMGAVVAATHLDLDEVRALKLMHEAESENPIAVERFMREARAAVKLKSEHVAQVYDVGRLDSGVPYIVMEYLEGSDLSRVARKEGALPPSEVAHYMLQACDAMAEAHALGIVHRDLKPANLFLTRRDDGSPCLKVLDFGISKILFQGSQPDLEITGKEVLGSPHYMSPEQMRSTKNADPRSDVWSLGAITYRLVTGRLPFPADSAMELAARILETVPQRPTAIRPEIPAGLEDVILRCLEKDPDKRIQSAHELAAALLPFAPTEALDMLPASRRLRSIAPPRNSIAPPRNSIAPAAADPTLTPLPFPAIPRPPAMPTLVGAASNAAQATWPSLPTPGPGTTTGMSNLGAWGATGSDLVPPPSSTRPRRFLALSAGALVLAAAAVVVLTWSSGTPADSHAASGAVTAPLPAEPVPPALPAAADSAQPPAAGHAGSAASAQRPLTAPAPTTARTASAPATQNVAAKRSPLTPPQR
>NZ_CP012159.1|WP_179955494.1|9318626_9319718_-|RluA-family-pseudouridine-synthase
MKFTITDLEAGSRLDKLLVQLVPGLGRAAAKRLFDEGRVRVVAPERTGRGRVASKGDVAAAGEVIELDLEPDDASGAAIPEPDAPLQVILERHDLVIVDKPAGMPTAPLKPGERGTLANALVGHYPEMANIGFSSREPGLCHRLDTETSGLVLAARTAKAFAALVNALKEARLDKRYLLICQSGDLPEIGAIEIPLAPHPKDRRRVYPCIHPRDVIRYEPRPATTTYRRVALAGLWELVEARAPKAMRHQIRAHFAAIGHPLAGDTLYGGPAAPGLERHALHAEYIAWAGSAEVPAFTARSPLPPDMQAIVGTPDMASDSTAEAAALDDELDDDVDEEDEDDVDEGDEDDDEPSDGADDTGAR
>NZ_CP012159.1|WP_050434238.1|9319722_9321198_-|hypothetical-protein
MRPPGLLNALPTVALALSTLLSPTLALAAPDPAAPAPASQVAPRRPTALLPTTLVEDSAQRVPDPSERGLAELAASLDALLADAAQDLGLTLDLTGRASAGVLPEADLAARARATGRLIIAPSVTDRGGDVEIRLSLADPRSSTLRIRVERTSTDVAPVRAAVMLRDLVADLGASPAAGRPEEGAPPVTSPSSAPMPSAPPAPNRSSGRSVLVANATLYGGLVGYSIQRSSGSQDPRLLYPLLAIGAGVGLGGSLIIAEEWDVGAGDAWFLASGAWWPTLAAHLIYEGRFAARAGDEDDERWAFGLVGSATGIAMATLGLTLRPMSDGGAVLAHSGAGLGLVLGGLAEIATTGNIDATPFTGAGYGAALGWLAAAAAATQVRISPSRVLSVDLGAVLGGLGGAALASPLLFDAPTAGEQRAWVGATTGGVLLGAGLAWFLTRGSTERSSGTSDTEPPSWWRPALPMMGMVGESVIGHRRAPAFGLIWSGTL

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Crispr_ID: NZ_CP012159_41

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012159_41

9600198-9600286

TypeIII-A

Consensus_repeat	Method
GTCGGGGAGGCAGGCGCCGCTCG	CRISPRCasFinder

1 spacers

cas6,csm2gr11,csm3gr7,csm4gr5,csm5gr7

The CRISPR arrays of NZ_CP012159_41

>merge|NZ_CP012159|41|9600198-9600286|CRISPRCasFinder
GTCGGGGAGGCAGGCGCCGCTCGAGGTGCAGTGGGCGTCGGTGGTGCACTGGGTGTCGAGGACGCAGTGGGGGAGGCAGGCGCCGCTCG

>NZ_CP012159|41|34|9600198-9600286|CRISPRCasFinder
GTCGGGGAGGCAGGCGCCGCTCG	AGGTGCAGTGGGCGTCGGTGGTGCACTGGGTGTCGAGGACGCA
GTGGGGGAGGCAGGCGCCGCTCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012159.1\|WP_050434407.1\|9587422_9588373_-\|type-III-A-CRISPR-associated-RAMP-protein-Csm3	csm3gr7	cd09684_csm3gr7_CAS-III-A:CAS-III-D	gnl\|CDD\|187815
NZ_CP012159.1\|WP_169796748.1\|9591268_9592174_-\|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	cas6	mkCas0066_cas6_CAS-I:CAS-III	gnl\|CDD\|187890
NZ_CP012159.1\|WP_050434411.1\|9593019_9593784_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050434418.1\|9614745_9615387_+\|polysaccharide-deacetylase-family-protein	unknown	unknown	gnl\|CDD\|213022
NZ_CP012159.1\|WP_050434413.1\|9595174_9599200_-\|thrombospondin-type-3-repeat-containing-protein	unknown	unknown	gnl\|CDD\|276965
NZ_CP012159.1\|WP_050434417.1\|9614204_9614744_+\|VOC-family-protein	unknown	unknown	gnl\|CDD\|319898
NZ_CP012159.1\|WP_050434415.1\|9607800_9611307_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|276965
NZ_CP012159.1\|WP_082363065.1\|9619487_9620027_+\|RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|224511
NZ_CP012159.1\|WP_050434408.1\|9588369_9589206_-\|type-III-A-CRISPR-associated-protein-Csm2	csm2gr11	pfam03750_csm2gr11_CAS-III-A	gnl\|CDD\|367635
NZ_CP012159.1\|WP_050434422.1\|9618268_9619447_+\|Spy/CpxP-family-protein-refolding-chaperone	unknown	unknown	gnl\|CDD\|197366
NZ_CP012159.1\|WP_082363062.1\|9594590_9595115_-\|SMI1/KNR4-family-protein	unknown	unknown	gnl\|CDD\|378155
NZ_CP012159.1\|WP_050434419.1\|9615383_9616223_+\|fumarylacetoacetate-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|223257
NZ_CP012159.1\|WP_050434406.1\|9586403_9587426_-\|hypothetical-protein	csm4gr5	cd09663_csm4gr5_CAS-III-A	gnl\|CDD\|273866
NZ_CP012159.1\|WP_082363577.1\|9583140_9583581_+\|type-II-3-dehydroquinate-dehydratase	unknown	unknown	gnl\|CDD\|235443
NZ_CP012159.1\|WP_156339083.1\|9611492_9613880_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050434414.1\|9603584_9607550_-\|thrombospondin-type-3-repeat-containing-protein	unknown	unknown	gnl\|CDD\|276965
NZ_CP012159.1\|WP_050434421.1\|9617053_9617695_-\|CAP-domain-containing-protein	unknown	unknown	gnl\|CDD\|349398
NZ_CP012159.1\|WP_156339082.1\|9584235_9586404_-\|hypothetical-protein	csm5gr7	cd09662_csm5gr7_CAS-III-A	gnl\|CDD\|187793
NZ_CP012159.1\|WP_050434409.1\|9589472_9591272_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237537
NZ_CP012159.1\|WP_050434420.1\|9616428_9616893_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP012159.1\|WP_050434407.1\|9587422_9588373_-\|type-III-A-CRISPR-associated-RAMP-protein-Csm3	gnl\|CDD\|187815	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	4.77937e-54
NZ_CP012159.1\|WP_169796748.1\|9591268_9592174_-\|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	gnl\|CDD\|187890	cd09760, Cas6_III, CRISPR/Cas system-associated RAMP superfamily protein Cas6. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6 is an endoribonuclease that generates crRNAs, predicted subunit of Cascade complex.	5.04873e-09
NZ_CP012159.1\|WP_050434418.1\|9614745_9615387_+\|polysaccharide-deacetylase-family-protein	gnl\|CDD\|213022	cd10917, CE4_NodB_like_6s_7s, Catalytic NodB homology domain of rhizobial NodB-like proteins. This family belongs to the large and functionally diverse carbohydrate esterase 4 (CE4) superfamily, whose members show strong sequence similarity with some variability due to their distinct carbohydrate substrates. It includes many rhizobial NodB chitooligosaccharide N-deacetylase (EC 3.5.1.-)-like proteins, mainly from bacteria and eukaryotes, such as chitin deacetylases (EC 3.5.1.41), bacterial peptidoglycan N-acetylglucosamine deacetylases (EC 3.5.1.-), and acetylxylan esterases (EC 3.1.1.72), which catalyze the N- or O-deacetylation of substrates such as acetylated chitin, peptidoglycan, and acetylated xylan. All members of this family contain a catalytic NodB homology domain with the same overall topology and a deformed (beta/alpha)8 barrel fold with 6- or 7 strands. Their catalytic activity is dependent on the presence of a divalent cation, preferably cobalt or zinc, and they employ a conserved His-His-Asp zinc-binding triad closely associated with the conserved catalytic base (aspartic acid) and acid (histidine) to carry out acid/base catalysis. Several family members show diversity both in metal ion specificities and in the residues that coordinate the metal.	3.19043e-40
NZ_CP012159.1\|WP_050434413.1\|9595174_9599200_-\|thrombospondin-type-3-repeat-containing-protein	gnl\|CDD\|276965	sd00038, Kelch, Kelch repeat. Kelch repeats are 44 to 56 amino acids in length and form a four-stranded beta-sheet corresponding to a single blade of five to seven bladed beta propellers. The Kelch superfamily is a large evolutionary conserved protein family whose members are present throughout the cell and extracellularly, and have diverse activities. Kelch repeats are often in combination with other domains, like BTB and BACK or F-box domains.	2.18677e-37
NZ_CP012159.1\|WP_050434417.1\|9614204_9614744_+\|VOC-family-protein	gnl\|CDD\|319898	cd06587, VOC, vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. Glyoxylase I catalyzes the glutathione-dependent inactivation of toxic methylglyoxal, requiring zinc or nickel ions for activity. The antibiotic resistance proteins in this family use a variety of mechanisms to block the function of antibiotics. Bleomycin resistance protein (BLMA) sequesters bleomycin's activity by directly binding to it. Whereas, three types of fosfomycin resistance proteins employ different mechanisms to render fosfomycin inactive by modifying the fosfomycin molecule. Although the proteins in this superfamily are functionally distinct, their structures are similar. The difference among the three dimensional structures of the three types of proteins in this superfamily is interesting from an evolutionary perspective. Both glyoxalase I and BLMA show domain swapping between subunits. However, there is no domain swapping for type 1 extradiol dioxygenases.	8.55693e-15
NZ_CP012159.1\|WP_050434415.1\|9607800_9611307_-\|hypothetical-protein	gnl\|CDD\|276965	sd00038, Kelch, Kelch repeat. Kelch repeats are 44 to 56 amino acids in length and form a four-stranded beta-sheet corresponding to a single blade of five to seven bladed beta propellers. The Kelch superfamily is a large evolutionary conserved protein family whose members are present throughout the cell and extracellularly, and have diverse activities. Kelch repeats are often in combination with other domains, like BTB and BACK or F-box domains.	5.82837e-40
NZ_CP012159.1\|WP_082363065.1\|9619487_9620027_+\|RNA-polymerase-sigma-factor	gnl\|CDD\|224511	COG1595, RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription].	2.62347e-30
NZ_CP012159.1\|WP_050434408.1\|9588369_9589206_-\|type-III-A-CRISPR-associated-protein-Csm2	gnl\|CDD\|367635	pfam03750, Csm2_III-A, Csm2 Type III-A. Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-associated) proteins. This entry represents Csm2 Type III-A, a family of Cas proteins also known as TM1810/Csm2.	5.3832e-11
NZ_CP012159.1\|WP_050434422.1\|9618268_9619447_+\|Spy/CpxP-family-protein-refolding-chaperone	gnl\|CDD\|197366	cd09916, CpxP_like, CpxP component of the bacterial Cpx-two-component system and related proteins. This family summarizes bacterial proteins related to CpxP, a periplasmic protein that forms part of a two-component system which acts as a global modulator of cell-envelope stress in gram-negative bacteria. CpxP aids in combating extracytoplasmic protein-mediated toxicity, and may also be involved in the response to alkaline pH. Functioning as a dimer, it inhibits activation of the kinase CpxA, but also plays a vital role in the quality control system of P pili. It has been suggested that CpxP directly interacts with CpxA via its concave polar surface. Another member of this family, Spy, is also a periplasmic protein that may be involved in the response to stress. The homology between CpxP and Spy suggests similar functions. A characteristic 5-residue sequence motif LTXXQ is found repeated twice in many members of this family.	3.45995e-08
NZ_CP012159.1\|WP_082363062.1\|9594590_9595115_-\|SMI1/KNR4-family-protein	gnl\|CDD\|378155	pfam09346, SMI1_KNR4, SMI1 / KNR4 family (SUKH-1). Proteins in this family are involved in the regulation of 1,3-beta-glucan synthase activity and cell-wall formation. Genome contextual information showed that SMI1 are primary immunity proteins in bacterial toxin systems.	3.80496e-07
NZ_CP012159.1\|WP_050434419.1\|9615383_9616223_+\|fumarylacetoacetate-hydrolase-family-protein	gnl\|CDD\|223257	COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism].	5.78522e-82
NZ_CP012159.1\|WP_050434406.1\|9586403_9587426_-\|hypothetical-protein	gnl\|CDD\|273866	TIGR01903, Hypothetical_protein., CRISPR type III-A/MTUBE-associated RAMP protein Csm4. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. Members of this cas gene family are found in the mtube subtype of CRISPR/cas locus and designated Csm4, for CRISPR/cas Subtype Mtube, protein 4.	1.47982e-13
NZ_CP012159.1\|WP_082363577.1\|9583140_9583581_+\|type-II-3-dehydroquinate-dehydratase	gnl\|CDD\|235443	PRK05395, PRK05395, type II 3-dehydroquinate dehydratase.	2.95803e-86
NZ_CP012159.1\|WP_050434414.1\|9603584_9607550_-\|thrombospondin-type-3-repeat-containing-protein	gnl\|CDD\|276965	sd00038, Kelch, Kelch repeat. Kelch repeats are 44 to 56 amino acids in length and form a four-stranded beta-sheet corresponding to a single blade of five to seven bladed beta propellers. The Kelch superfamily is a large evolutionary conserved protein family whose members are present throughout the cell and extracellularly, and have diverse activities. Kelch repeats are often in combination with other domains, like BTB and BACK or F-box domains.	5.67245e-38
NZ_CP012159.1\|WP_050434421.1\|9617053_9617695_-\|CAP-domain-containing-protein	gnl\|CDD\|349398	cd05379, CAP_bacterial, Bacterial CAP (cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins) domain proteins. Little is known about bacterial and archaeal members of the CAP (cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins) domain family. The wider family of CAP domain containing proteins includes plant pathogenesis-related protein 1 (PR-1), cysteine-rich secretory proteins (CRISPs), and allergen 5 from vespid venom, among others. Studies of eukaryotic proteins show that CAP domains have several functions, including the binding of cholesterol, lipids and heparan sulfate. This group includes Borrelia burgdorferi outer surface protein BB0689, which does not bind to cholesterol, lipids, or heparan sulfate, and whose function is unknown.	1.38017e-38
NZ_CP012159.1\|WP_156339082.1\|9584235_9586404_-\|hypothetical-protein	gnl\|CDD\|187793	cd09662, Csm5_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	6.25742e-14
NZ_CP012159.1\|WP_050434409.1\|9589472_9591272_-\|hypothetical-protein	gnl\|CDD\|237537	PRK13875, PRK13875, conjugal transfer protein TrbL; Provisional.	4.73076e-05

>NZ_CP012159.1|WP_050434413.1|9595174_9599200_-|thrombospondin-type-3-repeat-containing-protein
MGLRVLVTFVVALLLAGGALGVLGCASTDELSGNAADLIRTRFPAHAAEVLGTGTDDPPIPTEAGFALGFPGPNGTWQRIRARLPRDGSEWLELEGSGGFSIRVREVGATGSGEVVDGAVSYRRAGGASFWRAAAGGVEEWLLMGTDADTARAPAREAEVTWQIEGATPRQRDEAVELVDDEGRARLRVTAPRAFGREDQPIGVRLEARGEVIALKVEPTEGPVLVDPLWLLLDGMSMARESHAAALLADGRVLVTGGHDAIGQLLASAELYDPLTGTWTSTGEMTTERQAHTATLLGDGRVLVVAGDRYGFTEQSAELFDPVIGAWTPAGTLSVGRRWHTATLLGNGRVLVVGGERNGGIEATAELYDPATGAWTSTGAMSRARVLHTATLLVDGRVLVAGGYGDSGIDGTAELYDPVTGTFTVTGSLTVMRYAHTTTRLGDGRVLVAGGKSINHDEASAELYDPVTGVWTATDALSVARSYHTATLLGDGRLLAAGGQSSEGSVEVYDPLLGTWSLAPAMNFSRDAHTATRLPNGGILIVGDVDLPMVEVYVPSAPNPWTPTGTPSIRRAYHTATLLGDGRVLVAGGWSNQGYEQSAELYDPVAKLWTLMGTPSIARAYHTATLLGDGRVLVAGGWSNQGYEQSAELFEPATGVWSSTGTLNVARYGHTATLLGGGHVLVAGGWSGHGHEQSAELYDPATGVWSPTGTLSVARAAHTATSLGGGRVLVAGGWSGHGHEQSAELYDPATGVWSPTGTLSVARATHTATSLGGGRVLVAGGWSLSDHEKSAELYDPVMGAWTLTGSLNVARADHTAALLVDGRVLVAGGVGAGGALASAAIYDPVTALWSPEGTLFNGRYQHTATPLNDGTVLVTGGDSNTGVVASAELHGGYPLGAPCAPGLACLSGFCVNGVCCDAACTGPCTACTAAMKGSGADGHCGPIRAGTDPKDACPSDNTPCGDTGLCDGAGACQKRPQGTPCGGTSCAPPNHVQSLQCDGLGTCASALQSCGAYLCASGACRSFCATDPQCSDDAHCMPNGTCLPDKPLGATCILPKECASQACLAGVCALDADDDGIPDALDNCPLVPNTSQVDNDGDGLGDACDPDDDNDGILDAADNCPLVPNPDQADINGDGIGDACDCNNPPKPDGFACDDGNGCTLTDTCQNGVCVGRDPFICTQPDPLACRFAICEPATGSCAHLIKIEGSPCPEGECIAGGCFTGQVPGTSPTGSGGDSSGVGGNAEGGASSTTTSGSTGTGGAPPSNDLRGDASSHLHGNGCAVTSSANGDPSGGMTPWLLAGIAGLAARRRRTSRQAPKLTPRQHRTTTIHAARPRGTASPL
>NZ_CP012159.1|WP_082363062.1|9594590_9595115_-|SMI1/KNR4-family-protein
MGHGNLGVAMPVADEVKAILAEIEALGARVKLDEPSTDAEIVAAEAHLGFDLPEEYKEFLREIGGVSIEARRTWFFYGLPEKADIKALYVKEFDAFRGGEGGGAYYPARFMVVHDEGDFSNAAEGFVWDGDLGHLRATAGGDCIERSEFLVEGYWAFLSDQLEEIRDRIAEEGG
>NZ_CP012159.1|WP_050434411.1|9593019_9593784_-|hypothetical-protein
MVPLFNQLKALERDREDASDLAVDALAEVYGAEDVLENCVRDLDAAAAAVDRQNPSLTVQRTIFPSGYGADIKRDGNAQLNALTPLRVRAQPFAVAHPGIAAALTAIDAAEAAFKAALAARVTADGEAARTFAEELEGRRAVRQQLDSAYGRLRDHYKARPALAERYFLKAGTSRAKKVGSKPVAPSPETTPGREQGAGCEAPQTEAASLSEEASARQVVAAASSEGAAASDGKSARGRLARATRGVTEVASAT
>NZ_CP012159.1|WP_169796748.1|9591268_9592174_-|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6
MRRYVLRAIDEVHLPPFSGSTVRGAVGRALRRLVCATRQPVCDGCPVRAACAYAMLHDGFTPADRPSGSGEHAPPPLWLRDLEDRRKIAPGESVGFSMVAFGPAVASLPYVDEAVRGLGRSGLGRGRGAVALVEAHDEQRDGFGSLVDARVSALEAAVDAGKSLRVSLRSPVSIRLKGKAWEDPERPRPSWAERLLGGAVRRRVALERRWLDLASEEAPRVPRVIEDAAGLKVMEENIEVRRVKRFSASQGARMELHGVVGDMRLGGEGLKAALPWLVAGELLSVGAGTTFGFGRIELEAA
>NZ_CP012159.1|WP_050434409.1|9589472_9591272_-|hypothetical-protein
MTVGEFPVEVLRAQAAAHVEQLRGALEGGGVLVAAELSASPPPFPEGAKVLAWSLSPALARRARTAAGLGPAHVLHATDGRIVLAVPKAAREAVVESLRRDGRAVLDATGDSVAVDVAWRDLPEGALTESGDGSAVAALDALLERDLGQARLRRAEGVAAGFWTPEAPSPEGMRELLEQPELAFAQQGLEQFLRPEADTAEVRAADARAAVDRQRSGAPLAVARLDLDAMGRALRAVAEGKDGLTGLRDRFALLAAIQVARAKVRDVLAQRDAGPESEAPVGAGGAESAVSEGGAGGAAVAGGAGSAAGEGGAGSVAGDAGSAAGDAGGAGSAGGAGSQGVVGGEASPGEASVAGLDIGRTDASLITLPGGDLLLLAPWPEILGVVVAVRDTMVPYLVEVVRALGGDRAARQVDLSAGVAVGAPGAPLATLVELAEMELRRAKGARHTRHGERRKAALSCRGIAVGWDDLRGAVPLGRALGDAIATGQAPKGLLRRLFGLHALWRKSEQALEAGAARTAAEASKRRWLWAFQLGQRSAAVKGGGEVTTIVKRLARLALDNVDDGAPGAPRKTEQDAAAWLGLVAEIAAERARARREERG
>NZ_CP012159.1|WP_050434408.1|9588369_9589206_-|type-III-A-CRISPR-associated-protein-Csm2
MREVFEGNYRRLDQEARRFGERLGSEAARAQLRAVFGAVRRVLSLTGDERGRELAMLRPRLAHAAGRAEGLEPLREALVEATRIVEEQPEVRARFLLDFVEAVLCYATEGRRGQGAPRPPREPKEGQAKGERGERGERAERGERGERREGGERGERGERGERGERREGAEGGERPEGERREGRRRDRRSRDKAAAGAGADAGQSAEAVSAEASQETAGASEAGAFVGGEGSSSGSAASSAAPVAPGGAAGDEGATRENAGGDAPALDQAKSSSEESSS
>NZ_CP012159.1|WP_050434407.1|9587422_9588373_-|type-III-A-CRISPR-associated-RAMP-protein-Csm3
MTWGMLEKVFLRGTITTLTGLRVGGSEQGLDAAALENLVVRHALLDEPYIPGSSLRGRMRCLLERLQGIAGPPAGDGIGFGPADDPVHPLVQLFGMASKDGAGMPSRVMVRDALLTAESRKRLGRLRGVLPMTETKAEAMIDRVTAAATARTVERLPAGAELRFELVLDVRALPERQVAVVSEVHVAEATGAAAEPTAQVPGQALPAAWLLEVQRASRSEENGWGRDEDLRWLLTGLDLIQDDAIGGHGSRGYGRVKIRLDGVTHRTRDDYLQGRPEHALEGLAEELSARVKDINQRGERELQEILASLPAIEASR
>NZ_CP012159.1|WP_050434406.1|9586403_9587426_-|hypothetical-protein
MSFYRAFYLRFLAPVRVSAGGAGEAAAAPDLPSDSLSAALVVAAAELGGERIPPREMDELAREPPWVVSSLLPWVGLGGRPVRFVPRPVDRRFGDPRGTKPSGGRRDERSWADVGYVSVDLLNDPLATPPRSRCGTLAATPREAGDELQQVQWRRVIERGRSTVDRVSGVAAPFHLGELGLGAGAQAGAWVAVRTEREDRMQFVRVLLHYLADCGIGADRARGLGRFEVVHEGALTVEEGEEAGRLRVLLGYASPDRWLESALEEPEARYSVVRRDGRAHGALGGLGVQRKSLRLLAPGAVLPDRGVLVGQTRDVTPEGFTEHRIYRDGRTLAWPLARRA
>NZ_CP012159.1|WP_156339082.1|9584235_9586404_-|hypothetical-protein
MHAQAAEERGGMVEIVWHLEVLTPLHVGSGEGVLIKGIHAASVDGVTFVLDLDRLCAALPREAWDTLASAGFAAVIGEIPLRSVQRYAVRGELQGPAGVARFRPFARDGFGRPYVPGSTLKGAIRTALLGVLVEQAPPARDALRAAAELRDDAPGLSVERKALRVRTGEAVDDLLRHLYVPDVLVPPAAMELVAVKVASMAEEGRWGWKQRGRANAEAPDQEGVAETVVEAVRPGTVLRVPLRVDAARLRPTGLPAPRRPVPPDFSGNRELLLEGLLPAARAHGLRVLEPESGLWSASHVHPPAAEAVGTLLERARGTTSEAVLPVGWGMGWRGATGGLLERLDESLRTTDAGAEDPPVLAAARPTYALGRRGFPVFPKSRRLVDATTPLGWISVRAWEDADAITPLTEGEVPEGVLTGEALEAHRLPERSRHRREGRHALERGAREPGAEAEHASAEPEGTSEATRAEAAAAELGEAGEARAEGGGTTRPPWGQRPPREPRPPREGAPSEGGPREGAPREGGQREGAPARDRSGPPPDRRPREGGPPREGGPPREGGPPREGGPPRDRPAPRGPGGPGGFGSSGGPRGAGGPGGARGPGGFGGPSGSGGPRGQRPGDRRDDRSGPPRKFPTPAAAPAARAGDRVKATLLEEKSKKGKWRAQVESGAIGAIEPAGEPADIAAGQSVELVVKNASILGQDWTFVWPKFAEEQAAAAASKGRKR
>NZ_CP012159.1|WP_082363577.1|9583140_9583581_+|type-II-3-dehydroquinate-dehydratase
MFVLNGPNLNLLGKRQQEIYGSETLADIERLCHDTASRLGLRVDFRQSNAEHVLIDWIHAAREEAAGIVINPAAYTHTSVAIMDALAAYSRPILEVHISNIHKREPFRQHSYVSAVASAVISGCGSQGYALALTRIAHLIEAPAGR
>NZ_CP012159.1|WP_050434414.1|9603584_9607550_-|thrombospondin-type-3-repeat-containing-protein
MKSSIGLRVLVTFLVTLLMVVSVLGCASRDDLGGSAADRIRQRFPAHAAEVLGHPADAAPVSTDTGFALGLPGPRDTSPSVRAQLPRDGSDWIHLEAPGDFHVRVREDGATGAGHLVDATVSYRRNDGASFWRTAADGIEEWLLLDPAPSSAATARETELTWQIDGATLRQRADAIDLLDDVGRPRLQVTAPRAFGEDGRSLPVTLEARGTTIALRVETAGALALVDPLWRPVAAMSIERQAHTATRLANGRVLIVGGHHFGDELASAELYDPATSAWALTSAMNAPRAYHSATPLSNGRVLVIGGLSNGDYPPSAELYNPVGGTWSPVNFPGPGRFRHTATLLPSGNVLVVGGYNGSHLSSVLIYETTTTSWFAEDPITFARSAHTATLLNDGRVLIVGGYGNGGYLASVELFDPSNGTWAQTGSLNIGRYRHTATLLSDGRVLVTGGEGNDGLQVSAELYDPSNGTWTEVGAMDRGRFDHAAVLTADGRVLVTGGSWGGDEEASAELYDPAQDTWTRAPSMVFPRTEHTATLLQSGDILIAGSLAWATAEVYLPAATNSWTPGAPMNVSRSGPSATPLVDGRVLVAGGHGDGGHLSTAELYDPTNGTWTAAGPMSTTRYGHTATRLAAGSVLVTGSVTGDRRGDIYDPTTNVWTPTGSMSLARDAHTATLLSDGRVLVVGGKSGAVVHEGAELYDPMGGTWTTTGAMSTPRSHHTATRLANGRVLVTGGYGTVSFLASAEIYDPGNGSWIPVSPMSIERGSHTATLLNDGRVLVIGGMGHGSDIAQGELFDPGTGTWTPALSVSAMRYGHTAALLSDGRVLVAGGRTSNGLLGDTALFDPANSSWSRVGTLFRGRMESTATLLQDSRVLLAGGHSGGFFLTQTELHGSLQSGLPLGAACASGGTCASGFCADGVCCDTPCTGTCAACTVALKGGGVSGQCGPVRVGTDPGDECPSENTPCGNTGQCDGAGACQKRPQGTSCGTGTCLDINQAQTRACDGLGACVDVPQPCGNYLCDSGACYAHCVIDNQCIVEAHCTSNGTCIFDKPLGAPCRLPKECQSQACLASVCAADADRDDIPDALDNCPDVPNTPQTDTDGDGLGDACDPDDDNDGILDAADNCPLIPNPDQADVNGDGLGDACDCASPAKPNGAPCDDGNPCTLADTCQNGACVGGSPFTCPQPDPLACRFSVCEPAIGTCAHPVKIDGAPCPDGECIAGGCFTGQNPGTSPTGSGGGGEGGSGEGGAPTTTTTTGAGGATPGIGLEGDVYAHLHGNGCSAAGAAGQSRTRHDPTWLIAAIAALAAARRPRGCSAGAQKPRQ
>NZ_CP012159.1|WP_050434415.1|9607800_9611307_-|hypothetical-protein
MKSWIDLRLLVTRLVTLWTMVSAFGCASRDDPGSRVADLIHQHFPAHAAEVLGSGADDLPLTTQAGFTLGLPGPRGTFQRIRARLPREGSDWIHLEAPGGFALRIQEIGAAGPGEILDGAVTYPRENGATFWRAVEGGIEEWLVLAPDPAPSARTSELAWRIEGATLRQRADAVDLLDGEGRARLHVTAPRAFTEAGQPVPISLEARGTTLVLHVETSGERVLVDPLWSPAGSMSAARQGHTATLLGDGRVLAAGGFGSDIEASAELYDPTTATWAPVSPLGTARYRHTATLLASGRVLVAGGHLGGAEASAELYDPATGTWTPTASLSHARYAHTATSLNDGRVLVTGGFFGGAEASAELYDPATGTWTPTSPMTAARAYHTATLLNDGRVLVAGGSGGGMASAELYDPATGAWSPAGPLLTPRHHHTATSLNDGRILVTGGESNDGYETHAELYDPATGTWTPASPLRKARYAHTATLLDDGRVLAAGGWGNGGLDASVELYDPALDTWRDAPTMILPRAEHTATPLPSGDVLFVGSETHPLAEVYTPSGETPWIPTGAMATLRAYATATLLGDGRVLVAGGESDSGFEASAELYALSTGTWTAAAAMTTVRYLHTATPLSNGRVLVAGGWDYSGYKASAELYDPNTDTWIPTSPMTTARGYHRATSLSDGRVLVVGGFGDTGDVAGAELYDPTTGLWVATSAMTAPRAYATATLLDDGRVLVAGGYGDGAVSASAELYDPTTGTWTPTSAMTTERGHHTATPLSDGRVLVVGGHGNAGENASAELYDPTTQTWTPTAPLNVARYGHTATSLVDGQVLVTGGWAGTAYLGSALTYDPTTALWSSAGTMHDKRFFATATLLDDGRVLVAGGYEGTQALSRAELHATALLGDACTPGSGCISGFCVDGICCDTACSGTCTTCAAALKSSGPDGLCGPVRSGTDPVGHCPSDDTPCGNTGTCDGAGACHKPPQGTSCGAATCIAATEAQAPQCDGQGACVDTITSCGIYLCEAGACIETCTADAQCTADAYCTSTGNCHPLEPDGASCTRPEACQSGLCLAGTCVSSMGSGAGGAGGGSAGVGGSAGEGGSSTGEGGSQQGGGPPTTTSSGSNGPGRTSDDGGCSVSRAPGTSPRTAMTPWLLTALALVATQRHRCSRAPVERRKPHAA
>NZ_CP012159.1|WP_156339083.1|9611492_9613880_-|hypothetical-protein
MFRCLPHTHAVRVLPLASLALALSACASEGLSGTSYDPFWSLGDATQALLGDVAVDVSPESSLDAPVYGPAFGAQTFPVAAFNGTTYFVAWTDSRPGGTWGTRVSATGEVLDTAGIRLPFAGPVKIASDGDSFLLVGRGIAPNTGLVAMRISAAGAPLGTTLISSTGTSTGLHIAAGDSEYLVIWGGSGIFRARVAFDGTVLDPGGVLVASANTFAAGVSFDGTDYAIAWNSSSAPPGRLTTLHPDGTVVQQASFAHTPQALTCNAGQCFIAWMHGDLTVKAARVTMGGTVLDASGIDIGTMNWNNGNIAASHDGTTAVITWGSGQTPGNPPMGSSSVLYSRISASGTVLGSPYGTLVRSNARHAAILPSSAGSLLLWSDERHRGRQADLATIYGARLDSAGTLVDATGFVVSTSANSQRYPGIGFDGESFVVAWGDERNVAANQDQDLYAVHVSASGSMLDPAAIQLGTGPDRQTVPAVARDADGTTVAWRNCSFGEVVSCGVQGRHLRPNGTTVMSLGFSMANWTHKPPSLSASPDALISIIHGFVDNMHFMPMGSYYHPHGLTDGPFMPSDFPRHGGANIAGVPVQEYDHFIAWIPSVFGSGPIRASLFHPGFWWFGPMTDVTDASTKAWSLAITRSPDHALVAWHEHMGGVSRIMARRVGFDGTLLDAQPLLVAEHPECPIRDSFANPYEVAAPLNTVDLGASSVVFNGEHYVLGWKACGPTSDDLMGAVIGTHGEILAHFPITSDDAHDEAPTLAVSDAGAVVATYASLRLERPYGAWRVQTRRLDVHEP
>NZ_CP012159.1|WP_050434417.1|9614204_9614744_+|VOC-family-protein
MTTERRPTRLHHTAYVTRDLEKTRAFYEDLIGLPLVATWCESDELFGKVRTYCHCFFGLEDGSALAFFQFANQEDQNLFGPEMPSSPFHHIALNVDRATLERVQKKLADAGYEPPKTYVLEHGYCQSLYVVDPNGMTLELTCDAQEAISDDLVREREKKARSELARWLAGDHTSNNTFR
>NZ_CP012159.1|WP_050434418.1|9614745_9615387_+|polysaccharide-deacetylase-family-protein
MRRVTLSFDNGPDPDVTPRVLERLREREVLAHFYVLGKHVATPAGRSLVERARDEGHVVGNHSYTHVTPLGSDLRPDAVEQEIVRTEALLSPLVPGPKRFRPFGGGGLLGRHLLSGAARDYLVAHGYSCVLWNAVPRDWEDPGWVATALAQTGALEHALVVLHDVPEACLDGLAAFLDALRARGDEFTTDLPPACVPIDGGQIRADLSEIVNA
>NZ_CP012159.1|WP_050434419.1|9615383_9616223_+|fumarylacetoacetate-hydrolase-family-protein
MRIASLQSQHGPFLGVRRGDGYVDANAALPDLPRDLGAVLRAGLLERLTDVEGPLVRDVTYRPLVSDPGKILCLGVNYIDHAKEASLQKPDYPVVFGRFTTSFVGHEVPLVRPRLSTHFDYEAELLVVIGRRGRAIPRERALEHVAGYALLNDGTIRDYQKRTSQWTVGKNFDRTGAMGPDLVTPDELPPGARGLRIRGRLNGETMQEANTTDMVFDVVSAIALLSEAMTLDPGDVIAMGTPGGVGFVREPPVFLKPGDVFEVEVDGVGTLRNSIIDEA
>NZ_CP012159.1|WP_050434420.1|9616428_9616893_-|hypothetical-protein
MNLQHALLAPAISLLLAVTTGCGDDDAIPGGDAPCAAGEISFVGTMGGSSVDASYAYTGAVFSQLGTPSLEVSFNGEGGAAGDLFLTWPSIISDGDQTEVTGTLTWPSPSGATATSHDVAPGSIMTPTEEDKYYFSLDLDGGDHVDGCADMEVF
>NZ_CP012159.1|WP_050434421.1|9617053_9617695_-|CAP-domain-containing-protein
MSRLSAAAFLCALFASGCVAGAEPDEELAEDADLDEPTGAVVDELAADEGARRAEQESDALPSYCNDVLTWNSSYTTFENRVLTLVNQRRAAGAVCGGTPYPAATALALNENLRCAARKHSKDMGTNNFMSHTGSNGSSPWTRMKNAGYNYKNAAENIAAGQSTPETVVNGWMASPDHCKNIMNGALRDLGVGYHNASTSTYKHYWTQAFGSR
>NZ_CP012159.1|WP_050434422.1|9618268_9619447_+|Spy/CpxP-family-protein-refolding-chaperone
MNARGFRSLASVAVLSLASFVAACGSEPNAELENTQAEEQDLGVDEQAAKGSEETAKGPGRGEGRGPKGHFGKGGPGAMFGEVLRELELSDAQREAVKEVMGELRGGAEGKQPRALFAKLAAGVRAGSIDEAALQAELKGSEGEGRREAFVAAVQKLHQTLTPEQRKQLVAKISERAGKHEGRFEGKFDGKRGAMKGGKGRAHAMHGEKGGVERLLHGVTLREGQREQIETALASAGLDAAKFWGEKPDFEAMITARKALLDSFASDGFDAKAALPALGEGKGGPGAHLERMVASLKVVTPLLDDAQRAALADRLERGPMGMKGKRGAHRFEGPGRGGEQRRFEGPPRGGERPAMERARRDGEQRRFEGPRRGAGARGGAPEGLRDGARGER
>NZ_CP012159.1|WP_082363065.1|9619487_9620027_+|RNA-polymerase-sigma-factor
MSVDLRLLAARVTRGDEQAFRQVVDHTRAPLYRLAARLLGNLADAEDVLQEAYVNAYRGLREGRYDGRAKLETYLHRIVVNASTDLLRKRRESPKEVVREPRFDGSVPAEARVALRELDELLKRLAPPERAALVLVAMEGMSAREAGEVLGCSEGAVEQRLVRARTALREHGKEEVRHG

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Crispr_ID: NZ_CP012159_42

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012159_42

9724486-9724769

Orphan

Consensus_repeat	Method
GCCCGCNNCGACGCGGGCNC	CRT

5 spacers

The CRISPR arrays of NZ_CP012159_42

>merge|NZ_CP012159|42|9724486-9724769|CRT
GCCCGCGTCGACGCGGGCCCTGCCGCCTGCACCAGCGCTGGAGCCCCGGTCCTCACCGACAGGGGCGCCTCCGCCCGCACCGATGCGGGCGCCCCTCCGCGCACGGACAGCGGCGCCTCCGCCCGCACCGACGCGGGCGCCCCTCCGCGCACGGACAGCGGCGCCTCCGCCCGCACCGACGCGGGCGCTCCCGGGCGCGGCGGCGTCAGCGCAGGAGCACGCACCGACGCGGGCGCACCGACGCGGGCCGACGTGGGAGGGGCTCCCCGCGACGACGCGGGCCC

>NZ_CP012159|42|13|9724486-9724769|CRT
GCCCGCGTCGACGCGGGCCC	TGCCGCCTGCACCAGCGCTGGAGCCCCGGTCCTCACCGACAGGGGCGCCTCC
GCCCGCACCGATGCGGGCGC	CCCTCCGCGCACGGACAGCGGCGCCTCC
GCCCGCACCGACGCGGGCGC	CCCTCCGCGCACGGACAGCGGCGCCTCC
GCCCGCACCGACGCGGGCGC	TCCCGGGCGCGGCGGCGTCAGCGCAGGA
GCACGCACCGACGCGGGCGC	ACCGACGCGGGCCGACGTGGGAGGGGCT
CCCCGCGACGACGCGGGCCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012159.1\|WP_050434494.1\|9711905_9712205_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050434495.1\|9712420_9714520_-\|S9-family-peptidase	unknown	unknown	gnl\|CDD\|224423
NZ_CP012159.1\|WP_156339096.1\|9722581_9722737_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_156339097.1\|9743344_9743959_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050434509.1\|9741945_9742659_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050434503.1\|9728645_9729254_-\|ferritin-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|153097
NZ_CP012159.1\|WP_050436317.1\|9740568_9741672_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|308585
NZ_CP012159.1\|WP_050434504.1\|9729371_9730841_+\|deoxyribodipyrimidine-photo-lyase	unknown	unknown	gnl\|CDD\|129679
NZ_CP012159.1\|WP_050434500.1\|9721185_9722580_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050434505.1\|9730863_9734115_-\|amino-acid-adenylation-domain-containing-protein	unknown	unknown	gnl\|CDD\|341282
NZ_CP012159.1\|WP_050434497.1\|9715887_9717135_-\|sterol-desaturase-family-protein	unknown	unknown	gnl\|CDD\|225546
NZ_CP012159.1\|WP_050434511.1\|9745116_9745473_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_063796400.1\|9720101_9721193_+\|GTPase-domain-containing-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050434499.1\|9718658_9719873_+\|PepSY-domain-containing-protein	unknown	unknown	gnl\|CDD\|377164
NZ_CP012159.1\|WP_050434508.1\|9739451_9740354_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NZ_CP012159.1\|WP_050434496.1\|9714664_9715798_-\|SUMF1/EgtB/PvdO-family-nonheme-iron-enzyme	unknown	unknown	gnl\|CDD\|237030
NZ_CP012159.1\|WP_050434506.1\|9734610_9737841_-\|amino-acid-adenylation-domain-containing-protein	unknown	unknown	gnl\|CDD\|341282
NZ_CP012159.1\|WP_156339095.1\|9709433_9710537_-\|DUF2169-domain-containing-protein	unknown	unknown	gnl\|CDD\|370755
NZ_CP012159.1\|WP_050434498.1\|9717323_9718517_+\|acyl-CoA-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|173844
NZ_CP012159.1\|WP_050434507.1\|9738867_9739302_+\|nuclear-transport-factor-2-family-protein	unknown	unknown	gnl\|CDD\|378915

Protein	Function_ID	Function_description	E-value
NZ_CP012159.1\|WP_050434495.1\|9712420_9714520_-\|S9-family-peptidase	gnl\|CDD\|224423	COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism].	2.00089e-88
NZ_CP012159.1\|WP_050434507.1\|9738867_9739302_+\|nuclear-transport-factor-2-family-protein	gnl\|CDD\|378915	pfam12680, SnoaL_2, SnoaL-like domain. This family contains a large number of proteins that share the SnoaL fold.	2.96317e-11
NZ_CP012159.1\|WP_050434503.1\|9728645_9729254_-\|ferritin-like-domain-containing-protein	gnl\|CDD\|153097	cd00657, Ferritin_like, Ferritin-like superfamily of diiron-containing four-helix-bundle proteins. Ferritin-like, diiron-carboxylate proteins participate in a range of functions including iron regulation, mono-oxygenation, and reactive radical production. These proteins are characterized by the fact that they catalyze dioxygen-dependent oxidation-hydroxylation reactions within diiron centers; one exception is manganese catalase, which catalyzes peroxide-dependent oxidation-reduction within a dimanganese center. Diiron-carboxylate proteins are further characterized by the presence of duplicate metal ligands, glutamates and histidines (ExxH) and two additional glutamates within a four-helix bundle. Outside of these conserved residues there is little obvious homology. Members include bacterioferritin, ferritin, rubrerythrin, aromatic and alkene monooxygenase hydroxylases (AAMH), ribonucleotide reductase R2 (RNRR2), acyl-ACP-desaturases (Acyl_ACP_Desat), manganese (Mn) catalases, demethoxyubiquinone hydroxylases (DMQH), DNA protecting proteins (DPS), and ubiquinol oxidases (AOX), and the aerobic cyclase system, Fe-containing subunit (ACSF).	2.19061e-08
NZ_CP012159.1\|WP_050436317.1\|9740568_9741672_+\|hypothetical-protein	gnl\|CDD\|308585	pfam03022, MRJP, Major royal jelly protein. Royal jelly is the food of queen bee larvae, and is responsible for the high reproductive ability of the queen. Major royal jelly proteins make up around 90% of larval jelly proteins. This family also the sequence-related yellow protein of drosophila which controls pigmentation of the adult cuticle and larval mouth parts.	1.62731e-13
NZ_CP012159.1\|WP_050434505.1\|9730863_9734115_-\|amino-acid-adenylation-domain-containing-protein	gnl\|CDD\|341282	cd12117, A_NRPS_Srf_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including Bacillus subtilis termination module Surfactin (SrfA-C). The adenylation (A) domain of NRPS recognizes a specific amino acid or hydroxy acid and activates it as an (amino) acyl adenylate by hydrolysis of ATP. The activated acyl moiety then forms a thioester to the enzyme-bound cofactor phosphopantetheine of a peptidyl carrier protein domain. NRPSs are large multifunctional enzymes which synthesize many therapeutically useful peptides in bacteria and fungi via a template-directed, nucleic acid independent nonribosomal mechanism. These natural products include antibiotics, immunosuppressants, plant and animal toxins, and enzyme inhibitors. NRPS has a distinct modular structure in which each module is responsible for the recognition, activation, and, in some cases, modification of a single amino acid residue of the final peptide product. The modules can be subdivided into domains that catalyze specific biochemical reactions. This family includes the adenylation domain of the Bacillus subtilis termination module (Surfactin domain, SrfA-C) which recognizes a specific amino acid building block, which is then activated and transferred to the terminal thiol of the 4'-phosphopantetheine (Ppan) arm of the downstream peptidyl carrier protein (PCP) domain.	0
NZ_CP012159.1\|WP_050434508.1\|9739451_9740354_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	4.83374e-41
NZ_CP012159.1\|WP_050434497.1\|9715887_9717135_-\|sterol-desaturase-family-protein	gnl\|CDD\|225546	COG3000, ERG3, Sterol desaturase [Lipid metabolism].	1.84087e-37
NZ_CP012159.1\|WP_050434504.1\|9729371_9730841_+\|deoxyribodipyrimidine-photo-lyase	gnl\|CDD\|129679	TIGR00591, Deoxyribodipyrimidine_photo-lyase, photolyase PhrII. All proteins in this family for which functions are known are DNA-photolyases used for the direct repair of UV irradiation induced DNA damage. Some repair 6-4 photoproducts while others repair cyclobutane pyrimidine dimers. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair].	2.87775e-80
NZ_CP012159.1\|WP_050434499.1\|9718658_9719873_+\|PepSY-domain-containing-protein	gnl\|CDD\|377164	pfam03929, PepSY_TM, PepSY-associated TM region. The PepSY_TM family is so named because it is an alignment of up to five transmembranes helices found in bacterial species some of which carry a nested PepSY domain, pfam03413.	4.30355e-53
NZ_CP012159.1\|WP_050434496.1\|9714664_9715798_-\|SUMF1/EgtB/PvdO-family-nonheme-iron-enzyme	gnl\|CDD\|237030	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.	2.12285e-06
NZ_CP012159.1\|WP_050434506.1\|9734610_9737841_-\|amino-acid-adenylation-domain-containing-protein	gnl\|CDD\|341282	cd12117, A_NRPS_Srf_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including Bacillus subtilis termination module Surfactin (SrfA-C). The adenylation (A) domain of NRPS recognizes a specific amino acid or hydroxy acid and activates it as an (amino) acyl adenylate by hydrolysis of ATP. The activated acyl moiety then forms a thioester to the enzyme-bound cofactor phosphopantetheine of a peptidyl carrier protein domain. NRPSs are large multifunctional enzymes which synthesize many therapeutically useful peptides in bacteria and fungi via a template-directed, nucleic acid independent nonribosomal mechanism. These natural products include antibiotics, immunosuppressants, plant and animal toxins, and enzyme inhibitors. NRPS has a distinct modular structure in which each module is responsible for the recognition, activation, and, in some cases, modification of a single amino acid residue of the final peptide product. The modules can be subdivided into domains that catalyze specific biochemical reactions. This family includes the adenylation domain of the Bacillus subtilis termination module (Surfactin domain, SrfA-C) which recognizes a specific amino acid building block, which is then activated and transferred to the terminal thiol of the 4'-phosphopantetheine (Ppan) arm of the downstream peptidyl carrier protein (PCP) domain.	0
NZ_CP012159.1\|WP_156339095.1\|9709433_9710537_-\|DUF2169-domain-containing-protein	gnl\|CDD\|370755	pfam09937, DUF2169, Uncharacterized protein conserved in bacteria (DUF2169). This domain, found in various hypothetical prokaryotic proteins, has no known function.	1.64117e-73
NZ_CP012159.1\|WP_050434498.1\|9717323_9718517_+\|acyl-CoA-dehydrogenase-family-protein	gnl\|CDD\|173844	cd01155, ACAD_FadE2, Acyl-CoA dehydrogenases similar to fadE2. FadE2-like Acyl-CoA dehydrogenase (ACAD). Acyl-CoA dehydrogenases (ACAD) catalyze the alpha,beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of ACAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. The ACAD family includes the eukaryotic beta-oxidation, as well as amino acid catabolism enzymes. These enzymes share high sequence similarity, but differ in their substrate specificities. ACAD's are generally homotetramers and have an active site glutamate at a conserved position.	2.14108e-107

>NZ_CP012159.1|WP_156339096.1|9722581_9722737_-|hypothetical-protein
MDIAGDFVRIPMQRRQARSGETCQISRVDRGVVEPRRALLGGAAGARAPAV
>NZ_CP012159.1|WP_050434500.1|9721185_9722580_+|hypothetical-protein
MHSTEDTGQEDYVAPRFRASEGATWIHALHGNVPDHQIDFICCPEAPQGGFTRTHLGHLTRLMRYIEPATGSPFAFAIGNLSRDDTQHEPGHGALALLFGLRVAGETDSAGRQDPPLAHAVVAVDRALTGEALLEATLALYHHVTGLTGESTPENFYRAYARGMAQRPRTVPFLLGDYFAGFRDLPVLEPSTLTRHPSQSIEVRSGRIFLLHDADEPFERVAVMAARLAAWLYRSSLRWTAIVFGGTADIPGGLSIEFVTSPPLALGPKDRVLHFSDLADDASARDLLGVRRVPRRPRATSARRSGRSRSSSSHGRAAARPRRLSDPGAAGPVHPALHRRSPALAVAPTPTSWPRAASEPCCRLHGRVTGDAPFGAQRARPAERQRAPRSGWRNVVLSTQREDASPPRRRVVSSGVWLCTGALCALLFLTGLSVIAARTWTLASLGSPSLWLSLGASNESPEAR
>NZ_CP012159.1|WP_063796400.1|9720101_9721193_+|GTPase-domain-containing-protein
MSFFSIETSSVVILAIAVIGAVLTLHKVRQRRVHDVHVDEAGKLRAEMSLVRRELQLRNADCDRIARHYARLQVELKEKEECLLNLDSDILWHREQLATRLTRVRRTYRVLTMGVKYTGKTSLTLKWANPLVDLGTLKGTKTDRYERTVSITPSDERLVEHVFEIHDWGGEHIVDAQQEMILEEIHGVLLVVDLTGKDGKAADPIRIQAQLRAFQPEALRFFFGPKMLSTCKTVVLFINKSDVLSGTSAEVEKTAMDHYRPLIEALEHYRPQIDLRVFVGSASYGHSTHHLFAHFVERILPRSGYDPQLLQRMKADPDPPRAGTVRPVGMRLTGPGTHGGYVLQTPPGASTLNGRPRMVVSDA
>NZ_CP012159.1|WP_050434499.1|9718658_9719873_+|PepSY-domain-containing-protein
MKLPFRKALFWVHLVAGVVAGLVVALMSFTGVALAFKPQIMAWGAEQTLVAPPPSAGARRLPLEDVLARVRTAVPALRPTAISVYAQPDTPVLVTADKHTSFHVHAYTGEVLGQIAPGWSGFFQVMEEWHRWLGRTGDQRDAGRAITGVSNAAFLVLAVTGLYLWWPRKWTWRSVRQSVWFQRRLVGKARDWNWHNTIGLWTAPVLVVLTATGMVISYKWASNLVYTLTGSEPPQQAPLTIAPPSPAAKPLAMDALLDAAKPLAPPWERLTLRLPEPPKSKGGTPPAEATPEPVRITVREPDPWPRFFSPQLTLDPYTGALLAREEFADYSVGHQVRRWMRFLHTGEALGVGGQLVAALASLGALFLVWTGLALALRRFARWRKRRADDADTSEASLDTPGDAA
>NZ_CP012159.1|WP_050434498.1|9717323_9718517_+|acyl-CoA-dehydrogenase-family-protein
MDFELSPELRALRQDVRAFVDERIIPDEAALVAEDRQRKSDTLRRLQGEARAAGLWTPHLPPSHGGRGLGIMGMCALFREMGRSPVGARVFHCDAPDQGNMDLLLGSATPAQQERWLKPLCEGEITSAFCMTEPAPGAGADPSNLQTRATRDGNGWVIEGHKWYSTGGGDAAFLIVMARTSDDPRAGATMFLVDRKAEGVEHVRDIPVMAEPLLAHREAELKFHGVRVDDDAVLAGVGEGFRLAQQRLVPARLTHCMRWLGLATRALDLCKQYIATRHSFGQVLARHQMIQKMIADSAAAIHAGNLMTLHCAWMLERGQAKEARPYSSMAKNHVANTLLKVLDDAIQMHGGLGYSDDMPFASWYRHARAARIADGPDEIHTMVVARDFLTRGLDLLV
>NZ_CP012159.1|WP_050434497.1|9715887_9717135_-|sterol-desaturase-family-protein
MDALYIALAVPFFLVLIGIELLVNRRQGDLRYTFHDAVGSMSCGIGQQVIGLLIAAVNVSGYALVYEHFRVTTMSPTSPLAWFALLLGVDLGYYVYHRASHRISFFWATHIVHHQSEEYNLSTALRQSWFTGLTSWMFYVPLAVLGFSPVMFVSMLTLNTLYQFWIHTRAVGRIGWLEHVLNTPSHHRVHHGTNPRYIDKNYAGIFIIWDRLFGTFTPEDDEPVYGTVKPLQSFNPLWANVEHFKELLHRSRKTRRLRDKLLVWVMPPEWMPQDLGGPVTVPEVSRETQRKYDVVVPRGLDLYGAVGFASLVAGTTLLLWGAPKLSFAELSWAAAVLVAGTATWGGLVEARAWAVPLEWARLAAAAGFVAWLAHETAHFPVAVAASVAIALGLSVWVGRYLRRAPQEAPALLSPS
>NZ_CP012159.1|WP_050434496.1|9714664_9715798_-|SUMF1/EgtB/PvdO-family-nonheme-iron-enzyme
MRLPLLALVLAPTLTLACSGAAPEPVNNPPPSAKPTPPVAMATPPGTASTPAPLASTDPTAAPTAPTASTPATPPEPEGPSACPANMKLVEGEYCTEVEHTCKQSWFDKSNKKTVCEEFEPKARCVGQKVKKRYCIDTYEWPNVKGERPEVMNRFHQAQMKCAAVGKRMCSESEWTFACEGPEMKPFPYGYVRDAKKCNGDHPWDGPNMKAVAKRDPKELARLWRGVPSGTQPECISDFGVADLPANADEVVSTEQPKNSRRGDFDSVHSGGPWYKGVRNQCRPKIYTHDEDFYYYFLSFRCCGEADGKPTDPRTQRQIEEGWTLQKVERRAGFTLNAIQEKLELKKQGKCDCSERDILCKTMCGTLLGPGAVDATH
>NZ_CP012159.1|WP_050434495.1|9712420_9714520_-|S9-family-peptidase
MRTLRSLTTVLGFTLLTACGGAPTVEPSAAEPPPGTPVATTAPPAAAPMKAPRADAKLIPRSVLFGNPERAAPRVSHDGKHLAFLAPDQGVLNVWVAPIGDLAAAKVVTKDRKRGIRMFFWPYDSQYLAYQQDKDGDENFRVYAVDLKSGETKDITPYDGVRAQIVGLSDRIPGELLVALNDRDKRYHDIYRVNLKSGDRKLVYQNDQFAEIECDDDFKPRLAMKKNAAGGSEFFDLTGKEPKPFVTVAHEDDLTTGVLGYDRAGKILYFLDSRDRDTAALVTLDAKGKATVIAQDPKSDVQGVTRHPKTGKVQAVVSNRERRTWHVVDKAIQAELDALKAVTEGDFDIISRTLDDSKWTVAFTQSNGPVRYYLYDRVKKKADFLFTNQKALESIKLATMTPVVIKARDGLELVSYLSLPPDADPDADGKPTQTLPLVLLVHGGPWARDSWGLNPMHQWLTNRGYAVLSVNYRGSTGFGKKFVNAGDKEWAAKMHDDLLDAVKWAVDGKITTEKEVAIMGGSYGGYATLVGLTYTPDTFACGVDIVGPSNLVTLLESIPPYWVPIQEQFAKRVGDLRTPDGKELLLSRSPLLKADAIKKPLLIGQGANDPRVKQAESDQIVKAMQDKKLPVTYVLYPDEGHGFARPENRLSFNAVAETFLAQCLGGPYQPIGEDFKGSSIQVPEGASVVYGLSEALPKK
>NZ_CP012159.1|WP_050434494.1|9711905_9712205_+|hypothetical-protein
MGYEYVSAAKPDDACIASVQRALSLDPRYEVLSSTETGIALRLVRQPARDRWPEDLDVYFRPVLRVVFHSATRNDRNDFLKSLQSLLAGHGHDDRFEED
>NZ_CP012159.1|WP_156339095.1|9709433_9710537_-|DUF2169-domain-containing-protein
MSPFLIPEPRLRSVTNQTPFALFQCDKMAPGRRFFDTVVLKGTFALAPGELELAEQQRPIALADEPWDLTNAERSSLKHAGEVLLTKPSTDVIVTGTARSPGGEPRKAWDCAVEVRRGGETTLVGRAQALGPRCWRHTGAKGWVLTEPEPTLEVPIRYELAYGGAYVLPPEEGAPAEPTWVVHRPNPSGTGFFDERALDTARAYPAPQWQLRAHPVTSPNGEVPLAGFGPVARPWASRLHHAGTYDEAWIKKTREEVAQGMPSDYAADFDPRFFQCAHPDLIAPSYLEGDEEIVLTGLMPGAEPFTFQLPAVRVLAALIDGQGSRPPWGLPLDTVHLDLDAGTVTLCWRLTLDQALGVRAALFIAGR
>NZ_CP012159.1|WP_050434503.1|9728645_9729254_-|ferritin-like-domain-containing-protein
MSQIERSGRGIDATVTELEVPSAASLNRVGMAVVALLDRLTERLAFERSMTRLYEGLIAKLDKQGSFPDGPAREDLLAIQNEEVRHVGLLHAAIQTLGGDPRAMSAGARLARMTSSGVLQVIVNSRTTLAQGLSAMLMVERADSDGWRLLIELTRALGRHELADSFYLASAEEERHVEIVRRWVSHHALQELYAGLECQKAA
>NZ_CP012159.1|WP_050434504.1|9729371_9730841_+|deoxyribodipyrimidine-photo-lyase
MKRVPESRVRPGNDRPVRQGGDHVLYWMIASRRTRYNFGLQRALDWARELDRPLVVLEALRVGYPWASARLHRFALDGMVDNAHAFARAGVLYHPYVEPSADHGKGLLKALSERAAVVVTDDYPAFFLPRMVASAARKLDVLLEQVDSNGLLPVHSAERVFTTARSFRIHLQKQLAPHLHETPVADPLRRAEALPTLRALPKAITARWPAASAALLDGDEAALAALPIDQSVLPVPTRGGSVAAERALTRFLDEQLDLYVADRNEPDAEATSHLSPYLHWGHLSAHEVLAHLARREHWTADALGKEKSGAREGYWGMSANAEAFLEQLVTWREIGFNMCAMRRDHDQYSSLPGWALDTLKKHAKDPRPKLYTREQLTAAETYDPVWNASQRELLREGRIHNYLRMLWGKKILEWSKTPEEALSVMLELNDRFALDGRDPNSISGIFWVLGRYDRAWGPERPIYGTTRYMTSESAQRKLRMKQYLARYAR
>NZ_CP012159.1|WP_050434505.1|9730863_9734115_-|amino-acid-adenylation-domain-containing-protein
MVLIDEIERLASAPAPDVAVGDEGRRVLAKGGASPATSGRGRAPDVGLHHLAAWNDTRTDYPRDATLPELFEAVVAEAPEAIAVVFEGRTLTYGELDRHATRLAGALQRAGVGLGVPVALFAERSPALLIGLLATLKAGGIHVPLDPRYPVERLRQMTQTLGTKVLLERRGGAVTSWFEGQTIVLDDEGRFEAEKGDVQPLASFRSCAAAPAYVMFTSGSTGRPKGVVVPHRGVVRLVVNTNYTSFDRTDRVMHTANPCFDLSMFEIWGALLHGAQLVILPEGRLLSAGAFVEAVRAADVSVLFLTTALFHHFADTAPEAFQGVQTVLVGGDVLDPKWAHDVLRRAGVKHLVNGYGPTEATGFSTAYRVRDLPEETPAVPIGTPIANSRAYVLDEALQPVPVGVSGELYVAGDGLSQGYWNESQLTASRFVPDPFAVEPGAVMYRTGDGARHRADGTLEFLGRLDRQVKIRGYRIEPAEIEAVLASSSLVKEAVVVVQEDGRGDKRLVAYVVAQTDATTLRAYLAARLPHQAIPSAFVLLPGLPLTPNGKVDRAALPPPGRLETRSPSDELEPPRTPTEQHLAWIWREVLGVDEVFRSDSFFALGGNSLLLARLLLRVQQEQSVHLSAESLFSSATLAEFAQRVDEAVGSHGTPVVTTTVQHLTTDSTLDPSIRPSPDAAPPATQLRHLLLTGATGFMGAFLLRDLLSRTDAQIHCLVRAADTAHGLRRILEMVRRYTSWTPEDVSRIVPIPGDLARARLGLSDEQLAFLTENVDAIYHSGADVNYVNPYFSHRDANIGGTREILRMACAHKLKPVHFVSSTAVYGQIGYYVTTDLLHEDEGLEFSRPYMGTDMGYSQSKWVAEKLVTTARERGLPVNIYRPGFLMGDSVLGNSNTNDFITRLVKGCVQLGCCPDMENHRKIFTAVDFVSAALAEISLDPTARGGVYHLVPSPKDDLSLNGFFDLLIESGYPLERVTYGEWVDRLRRAAETSSDNVLFPLLPLLSEPVYKGLTRWELCVRMPPFDDTNTRRALAGSGISCPPLGKKLMDVYLGWMHRTGYLAPPPQQAAVAAPTPTTEVAASV
>NZ_CP012159.1|WP_050434506.1|9734610_9737841_-|amino-acid-adenylation-domain-containing-protein
MRAYEEIEFTGSNDTMGAGGVALRAATEEGPSRAMSGSGEPLDTRRRRLDAWNDTRTDYPRDATLPELFEATVAASPDAVAIDFEGRTLTYRELDRRASALARRLRGIGVGPGVPVALFAERSPELVIGLLGTLKAGGIHVPLDPNYPEERLLQMAQTVGTRVLLSRGERAVPSWFQGQHVVLDEGRLGAAESEAHTPTLLRAGAEDPAYVMFTSGSTGRPKAVAVSHRAIVRLVVGTRYVSFGPEDRVMHAANPSFDASIFEVWGALLHGARLVILPEGRQLSPGAFEEAVRTAGISVMFLTTSLFHHLADTAPEAFDHLGTLVVGGDALDPRWAHAVLRRGGLKRLVNGYGPTEATTFVTSYVVRDAPEETRALPIGTPISNSRAYVLGEDLQPVSVGDAGELYVAGDGLSHGYWNDSQLTASRFVPDPFAVEQGACMYRTGDGARYRPDGTIEFLGRLDRQVKLRGFRIEPAEIEAVLATCPQVKASVVVVREDCPGDKRLVAYAVAQTNAASLRAHLEARLPPHAVPSAFVLLPALPLTPNGKVDRAALPAPGRAGTPRPVDEQELPRNLTEQFLARLWREVLGVEEVFRSDSFFALGGNSLHVARLLLRIQQERGVQLSAESLFSAPTMASLARLVDEVVRSNAKPMVTTTVQHLTTDGTLDERIRPESDAVAPTSALHHLFLTGTTGFLGAFLLRDLLNRTDARIHCLVRAEDASQGLRRVLDALQRYTGTTPKDASRVVAVPGNLAHPQLGLSAERLAFLTEHVDAIYHCGAEVNYVNPYLAHRDVNVGGTRELLRMACTRKIKTFHHVSSIAVYGQIGYYISTDLLGEDAGLEFSRPHMGTEMGYSQSKWVAEKLVTTARERGLPVNIYRPGFLLGDTVRGAANTNDFMSRLVKGCVQVGSCPDMEHHRKVFTPVDYVSAALTHISLDRSTLGGVYHLVPTPNEDIKLNRFFDLVIGSGYKLERVSYGTWVSRLLRASETASDNALFPLLPLLSEPVHGELTRWELCVRMPPFDDANTRRALSGTGIVCRPLDRALFEVYLSRMHRTGFLAPPTRRVEGTAADVASSA
>NZ_CP012159.1|WP_050434507.1|9738867_9739302_+|nuclear-transport-factor-2-family-protein
MAADQIIARLRSIFDAFTTRGDASHLLECLTEETVYQISIGPGTPVANEYVGKEAITEYFRGLPANVQHISLNIHDYFANDQKGVVTGDETLRIVKDGTVFYTQWATIFTFDGDKITHVMVVENLGALSQAYGVPHAGPPSIAA
>NZ_CP012159.1|WP_050434508.1|9739451_9740354_-|LysR-family-transcriptional-regulator
MRPDWDDLRVFLAVARAGNLSAAARAIGQTQPTLGRRLRALEEVVGTRLFQRSAEGFVLTDEGARILAHVERMEAEALSVDRALAGQEAELSGLVRVSTSEWFGSHVVAPIFARFTQRHPRVTIEIVAETRLLSLARREADLVFRFRRFEESDVVERKATHVAFGVYATSAYLKRAGTPTRGEGEGHALITMNEAFAGLADVTWLRRMLPAAHIAGRSNSRDVQAALCEAGGGIAVLPRTLGDGRRSLRRLDLGEPPPGRDIWAGYHADMRRSPKLRALLDFLGAELAAMAEQLAPTDGP
>NZ_CP012159.1|WP_050436317.1|9740568_9741672_+|hypothetical-protein
MKTLTAILAATSLLVACQPPDASAPSAPTSTPTLTVAATSDAMIWNAVAVADDGRIFVSAPRWTGTRGPSLARLDAQGRPAPYPDAAWNAWKPGDDAAHAFVNINAIHRDTEGGLWVVDTGSPDFGGAPLPGGAKLVRIDLARDAVLRVYPFDERIATPRSYVDDLRFHGRNAYLTDAGQPGLIVLDIDTGDARRVLDGTPFTTASEDRPIVVDGQVLRAPDGKPLRVHADPLEVSPDGQWFYFAPLSGPMWRIETRWLDTPGLDDATLAEHVEPWFDLPAVGGTAMDADGTLYFTDLAQNALRKRTPDGEVETILTDPRLHWVDAPYLDARGVLWMPAPQMDRVALFNGGEARTRWPVELLTLSLR
>NZ_CP012159.1|WP_050434509.1|9741945_9742659_-|hypothetical-protein
MADNYIDYFEVDEYGGGFLTALMRLEGVATLVNVSGLRGLVLGSVQGVNQELKNAGITRSDLRGQRVGVEEATSRGRKELERFHSYLNSLDEAAQFDREAFFKRSKLGALSALKPADVNARLKDAIRGFDVPANVALPDRVARLAKLTEASDDLEAALADKGTSVAVKLKSTASLVQARERFLHVYNQVAKPLVRAELSLLGREREMRDFFPDLRVHEDRPPLGPKPPIAGDAPSAT
>NZ_CP012159.1|WP_156339097.1|9743344_9743959_-|hypothetical-protein
MDLTSVAVEEVRAEAAEVPSPSQRLRLGLQAADRGHAELGGERYTAWSDSSGGSFFSGWATDSDGRDPDSLRIHLQVEFSVWFVDTDLRVCLEASDGNATLQFGKRQCTPWASQYGGWSEVVSDADGRDPDAYRITVETRLAAPGHAIRDFRLGLRGYDGGGAHHAGEARYTPWARRGGGWSRWATDDNGYNPDGFALHLDVKL
>NZ_CP012159.1|WP_050434511.1|9745116_9745473_-|hypothetical-protein
MASTAKKLTRGSGQHSRDLEPEEQPPPAPRLVEGEEALRVAQSLRPEEREDEPESVPEERRGLEERRVDTRLEGLSGMGAVLGEISEDKDQLGHVERQGLRREEQAQIERLLDPDELH

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Crispr_ID: NZ_CP012159_43

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012159_43

9925468-9925931

Orphan

Consensus_repeat	Method
ACGACGGCATCGACAACGATGGCGACGGC	CRISPRCasFinder

5 spacers

The CRISPR arrays of NZ_CP012159_43

>merge|NZ_CP012159|43|9925468-9925931|CRISPRCasFinder
CCGACGGCATCGACAACGACCTCGACGGCCTGACCGACTGCGCCGATCCGGACTGTGCCAGCCCGGCCTGCCTCGAGGTCTGCAACGACGGCATCGACAACGATGGCGACGGCGAGGTCGACTGCTTCGATCTCACCTGCGCCAGAAGCAACTTCTGCCGGGAGATCTGCGACGACGGCATCGACAACGACGGCGACGGCCAGGTCGACTGCGCCGACCTGTATTGCTACCGCAACAACGACTGCCGCGAGACCTGCTGGGACGACACCGCCGACGACAACGACAACGGCCTCTCGGGCTGCTTCGACTTCCAGTGCACCGACTTCGGTGGCTGCTTCGAGATCTGCAACGACGGCATCGACAACGACGGCGACGGCGACACCGACTGCGAGGACATGCGCTGCTGGACCCACGCACGCTGCCAGGAAGACTGCACCGACGGCCGCGACGACAACAACAACGGC

>NZ_CP012159|43|35|9925468-9925931|CRISPRCasFinder
CCGACGGCATCGACAACGACCTCGACGGC	CTGACCGACTGCGCCGATCCGGACTGTGCCAGCCCGGCCTGCCTCGAGGTCTGCA
ACGACGGCATCGACAACGATGGCGACGGC	GAGGTCGACTGCTTCGATCTCACCTGCGCCAGAAGCAACTTCTGCCGGGAGATCTGCG
ACGACGGCATCGACAACGACGGCGACGGC	CAGGTCGACTGCGCCGACCTGTATTGCTACCGCAACAACGACTGCCGCGAGACCTGCTGGG
ACGACACCGCCGACGACAACGACAACGGC	CTCTCGGGCTGCTTCGACTTCCAGTGCACCGACTTCGGTGGCTGCTTCGAGATCTGCA
ACGACGGCATCGACAACGACGGCGACGGC	GACACCGACTGCGAGGACATGCGCTGCTGGACCCACGCACGCTGCCAGGAAGACTGCA
CCGACGGCCGCGACGACAACAACAACGGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012159.1\|WP_050434618.1\|9919231_9920815_+\|VWA-domain-containing-protein	unknown	unknown	gnl\|CDD\|283431
NZ_CP012159.1\|WP_050434624.1\|9928332_9929481_-\|RNA-methyltransferase	unknown	unknown	gnl\|CDD\|236981
NZ_CP012159.1\|WP_050434627.1\|9933124_9935143_-\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP012159.1\|WP_169796766.1\|9930105_9930243_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050434622.1\|9925959_9927069_-\|Rieske-2Fe-2S-domain-containing-protein	unknown	unknown	gnl\|CDD\|239551
NZ_CP012159.1\|WP_050434625.1\|9931217_9932123_-\|DUF4398-and-OmpA-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|143586
NZ_CP012159.1\|WP_050434628.1\|9935340_9935931_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|224584
NZ_CP012159.1\|WP_050434611.1\|9913016_9913478_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050434626.1\|9932151_9932502_-\|DUF4398-domain-containing-protein	unknown	unknown	gnl\|CDD\|379572
NZ_CP012159.1\|WP_169796764.1\|9916047_9917211_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227511
NZ_CP012159.1\|WP_050434617.1\|9917842_9919228_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_156339115.1\|9929935_9930106_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050434614.1\|9915013_9915994_+\|PAS-domain-containing-protein	unknown	unknown	gnl\|CDD\|132912
NZ_CP012159.1\|WP_179955546.1\|9917382_9917838_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050434620.1\|9922011_9925131_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236090
NZ_CP012159.1\|WP_156339114.1\|9914273_9914849_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050434612.1\|9913704_9914262_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050434623.1\|9927088_9928285_-\|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|224983
NZ_CP012159.1\|WP_050434629.1\|9936153_9937314_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340888
NZ_CP012159.1\|WP_050434619.1\|9920849_9921995_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|336785

Protein	Function_ID	Function_description	E-value
NZ_CP012159.1\|WP_050434618.1\|9919231_9920815_+\|VWA-domain-containing-protein	gnl\|CDD\|283431	pfam05762, VWA_CoxE, VWA domain containing CoxE-like protein. This family is annotated by SMART as containing a VWA (von Willebrand factor type A) domain. The exact function of this family is unknown. It is found as part of a CO oxidising (Cox) system operon is several bacteria.	4.39287e-17
NZ_CP012159.1\|WP_050434624.1\|9928332_9929481_-\|RNA-methyltransferase	gnl\|CDD\|236981	PRK11783, rlmL, bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL.	8.75048e-124
NZ_CP012159.1\|WP_050434627.1\|9933124_9935143_-\|serine/threonine-protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	2.42239e-99
NZ_CP012159.1\|WP_050434625.1\|9931217_9932123_-\|DUF4398-and-OmpA-like-domain-containing-protein	gnl\|CDD\|143586	cd07185, OmpA_C-like, Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA. OmpA-like domains (named after the C-terminal domain of Escherichia coli OmpA protein) have been shown to non-covalently associate with peptidoglycan, a network of glycan chains composed of disaccharides, which are crosslinked via short peptide bridges. Well-studied members of this family include the Escherichia coli outer membrane protein OmpA, the Escherichia coli lipoprotein PAL, Neisseria meningitdis RmpM, which interact with the outer membrane, as well as the Escherichia coli motor protein MotB, and the Vibrio flagellar motor proteins PomB and MotY, which interact with the inner membrane.	9.69018e-46
NZ_CP012159.1\|WP_050434628.1\|9935340_9935931_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|224584	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis].	3.63089e-12
NZ_CP012159.1\|WP_050434626.1\|9932151_9932502_-\|DUF4398-domain-containing-protein	gnl\|CDD\|379572	pfam14346, DUF4398, Domain of unknown function (DUF4398). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and archaea. Proteins in this family are typically between 127 and 269 amino acids in length.	0.000230076
NZ_CP012159.1\|WP_050434614.1\|9915013_9915994_+\|PAS-domain-containing-protein	gnl\|CDD\|132912	cd07041, STAS_RsbR_RsbS_like, Sulphate Transporter and Anti-Sigma factor antagonist domain of the "stressosome" complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation. The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain of proteins related to RsbS and RsbR which are part of the "stressosome" complex that plays an important role in the regulation of the bacterial stress activated alternative sigma factor sigma-B. During stress conditions RsbS and RsbR are phosphorylated which leads to the release of RsbT, an activator of of the RsbU phosphatase, which in turn activates RsbV which leads to the release and activation of sigma factor B. RsbS is a single domain protein (STAS domain), while RsbR-like proteins have a well-conserved C-terminal STATS domain and a variable N-terminal domain. The STAS domain is also found in the C- terminal region of sulphate transporters and anti-anti-sigma factors.	5.83064e-38
NZ_CP012159.1\|WP_169796764.1\|9916047_9917211_-\|hypothetical-protein	gnl\|CDD\|227511	COG5184, ATS1, Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell division and chromosome partitioning / Cytoskeleton].	3.50978e-19
NZ_CP012159.1\|WP_050434620.1\|9922011_9925131_+\|hypothetical-protein	gnl\|CDD\|236090	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated.	8.6074e-07
NZ_CP012159.1\|WP_050434622.1\|9925959_9927069_-\|Rieske-2Fe-2S-domain-containing-protein	gnl\|CDD\|239551	cd03469, Rieske_RO_Alpha_N, Rieske non-heme iron oxygenase (RO) family, N-terminal Rieske domain of the oxygenase alpha subunit; The RO family comprise a large class of aromatic ring-hydroxylating dioxygenases found predominantly in microorganisms. These enzymes enable microorganisms to tolerate and even exclusively utilize aromatic compounds for growth. ROs consist of two or three components: reductase, oxygenase, and ferredoxin (in some cases) components. The oxygenase component may contain alpha and beta subunits, with the beta subunit having a purely structural function. Some oxygenase components contain only an alpha subunit. The oxygenase alpha subunit has two domains, an N-terminal Rieske domain with an [2Fe-2S] cluster and a C-terminal catalytic domain with a mononuclear Fe(II) binding site. The Rieske [2Fe-2S] cluster accepts electrons from the reductase or ferredoxin component and transfers them to the mononuclear iron for catalysis. Reduced pyridine nucleotide is used as the initial source of two electrons for dioxygen activation.	1.56496e-26
NZ_CP012159.1\|WP_050434623.1\|9927088_9928285_-\|NAD(P)/FAD-dependent-oxidoreductase	gnl\|CDD\|224983	COG2072, TrkA, Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism].	1.99784e-47
NZ_CP012159.1\|WP_050434629.1\|9936153_9937314_+\|MFS-transporter	gnl\|CDD\|340888	cd17330, MFS_SLC46_TetA_like, Eukaryotic Solute carrier 46 (SLC46) family, Bacterial Tetracycline resistance proteins, and similar proteins of the Major Facilitator Superfamily of transporters. This family is composed of the eukaryotic proteins MFSD9, MFSD10, MFSD14, and SLC46 family proteins, as well as bacterial multidrug resistance (MDR) transporters such as tetracycline resistance protein TetA and multidrug resistance protein MdtG. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. TetA proteins confer resistance to tetracycline while MdtG confers resistance to fosfomycin and deoxycholate. The Solute carrier 46 (SLC46) family is composed of three vertebrate members (SLC46A1, SLC46A2, and SLC46A3), the best-studied of which is SLC46A1, which functions both as an intestinal proton-coupled high-affinity folate transporter involved in the absorption of folates and as an intestinal heme transporter which mediates heme uptake. MFSD10 facilitates the uptake of organic anions such as some non-steroidal anti-inflammatory drugs (NSAIDs) and confers resistance to such NSAIDs. The SLC46/TetA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.41378e-77
NZ_CP012159.1\|WP_050434619.1\|9920849_9921995_+\|AAA-family-ATPase	gnl\|CDD\|336785	pfam07728, AAA_5, AAA domain (dynein-related subfamily). This Pfam entry includes some of the AAA proteins not detected by the pfam00004 model.	3.6302e-44

>NZ_CP012159.1|WP_050434620.1|9922011_9925131_+|hypothetical-protein
MTKRIEQITADPSLTALREQLLAAAAAFTDGAQSVGDLLRAMMDDVERAAAEPLEVFPVKHHSPASALHMSQRLRARPPRVIFMEGCEDLTAALQGLEHCQFPVALQAFAPESTEFPPDWTPLNLVMPLTEFSAEYQAIAFCRQNPSTQLVFVDRSADHVFQWSPRDKAPGTAAGETDGDADTSTEEGEGEEAKDTHNLHGGAVGLRIGAMEPTFDDFLEVLLRNARVKHYSEWWSQYVEGPTLGADYATYRHVLFLVASLLRRAGTRRKDQGENEQRERYMWALMRKWLRDNEVDPRDAIHVCGAIHAVSPIPEFGVHSKIEWTITPRTSTPWLYGIVPSSYAAIEHQFGLPAGELAIARQSWEKGHAALGVEAFRIQPPGKKAAAAGALAKKPTAPPKKAAAAAAATRAATSDDGAATTIDAKAVAKLHELLTRPPAFVEGDDEQLTHWCVDVVRLARKNGYLASTADTIAIHHTAQLLARLRDRPHPSPYDFRDAAITCLEKDRVPGKRNISRICDILLGGDRLGKVGYESLPPLAQDVYDRLSVLGVNLKASTIQRALLDITARPQLLPASDLLWRLHHLGIPVRPIMGERTLGHKPKQESWDISIGKSQHALIQLGYEGGTVEQVLEKRLKAKAFKDGARTVNALEAAEESILYLKSGRLARELGLRAVELLRNETGGADAPEIFQRVRRLVHYYRTLGLPDWIKDFVATGYQHYATLLPEAFTDRGVTPQQLAAMLAFIFTQEALAFSVGCQRSQLLISVKQAAPTDPPKLALLWATQWVLTLKSEDELRGEFTHLLSQPLLLPAFPDYVAGFLLALEFTPRITRLCVELVTRSFAELPENVLVPWLPKLVVALRPLGPGVMGTLVKEAGLAFPRAMNQLSGWQFPWERPSKTSAAAAAPTTASTPSAGSPGVQAVAPAAAPPAPSGPVLSPTETALAGLLRQHPEPLDGLAARLGVAGAWQALGAPGAATDVSAATAAGPEGAIDTSDPNAEPVASVGPHTAAAPPAGAETARILQQHPEPLQALATWIGAS
>NZ_CP012159.1|WP_050434619.1|9920849_9921995_+|AAA-family-ATPase
MATSKVAASSDEKLRLPAEEKYAEELAYLASVDKGQKPFAWRLSPRMIRTFILGATPADKLDRPVAQKFFGDPSLVERAIVTLASDRGLLLIGDPGTGKSWLAELLAAALCGNSTHVVQGTAGTTEDHLKYSWNVAMVIASGQSHDSMIPSPIMTAMVRGEIGRFEELTRCGSDVQDALISILSEKYISIPELRTGNNVVFAKPGFSMIATANSRDRGVNDLSTALKRRFNFVTIPIVTNKKSEKEIVLFRTRELMARNQIQLDVPPTLLDILLQTFADLRETSANSQNEDQKLESSLSTAEQIGVLEDAILHSRFFGTSELGPDTLARSIVGTLVRRVPEDVSIMNKFWHAVVEPSAKKKKDKAWEAFTDGGKAALTSFK
>NZ_CP012159.1|WP_050434618.1|9919231_9920815_+|VWA-domain-containing-protein
MSDDAGDPLVLKARQALYWRLLGGIFDQGEVAPNLEDLARGLADQTDVPTAILDPEMSVDMFVQRFPALKPDFERPLPGFETPTDEDDDGSDGDDEDDAKEATSTDDEDGDDSDDSDDDSSDDDSSDDDDSDAPDDTTSAKPARPGAPQPSPEPRDLHGTVKRTLVTSKLLLNAFGPNTQNPKVSATQYNQWTKDVGWLERCLGLTPGSLRGQARSAGSVGAGAGEATRPPIGDDELRAGLQSIEADMIHRMDLREVLADRALAEKLTPSMALVEQLLWDKDNLSKEALANAKRLIKKYVDELAQVLKLQVRKAITKTRDDSVPPRRIFRNLDLKRTVWKNLTNWDPERRKLYVDRLYYVSTAKKSLPTKLIILVDQSGSMTAAMVQTTILASIFAGLPNVIVHLFAYDTRVIDLTPWVDDPVETLLRTKLGGGTTMRVALDAAEPLIDSPANTAVVVISDYYDWSDFFSVLRRWKESGVRLIPVGSLQSSGYFSVDAGYRERFKELGTPILNGSPKKLIEQIKKLL
>NZ_CP012159.1|WP_050434617.1|9917842_9919228_+|hypothetical-protein
MPLADLATPPAAVLDTEALLDSLDQSFSGGFARLHGEHLDALASLGRAFTGTPLAGALTEALEGIGRSEFVDRHFLVLAAARAALQGAQHDALAAQAGSALGRPVARPEEIPAGTAQAPAPKIEVWLESVRHWLMELALAGFTNLEVSAILPFQATLEQLESEPHLARHAALLGGFLNELLTVFPARGTPNIPLARWADLWSRAMILAARPPEPARTRPATGELRVFAADLRQHENFATLVAFGSLREAKQPPRLVRATVSAFKVDVIQGEELAPLFADAAELLLDGLASSKAIAISDMRLTATGDLLWNFKAAKLGKAFDPLAEASDVLKDAPAARPSLDPADRHPALLEELVYLTGHQVTIKDNALTLTLDGAALPLDSDRLPETDDLSLDDVKGSGAVVGLLRFDGGRWSLQPLLAGGGKKKLRFIGASLGGGRGKKSKLGALATLKERSSKLLRKKS
>NZ_CP012159.1|WP_179955546.1|9917382_9917838_+|hypothetical-protein
MIKPPSLARPRKVEKVPFVELYAGRLQGVVSSGSDIERVYVSFFDGSSGNFNCSTNNNRPCGGLRSSPCKHLQALMGEAVLQFGAPRVIAYLGLGADPASAKGPGDLLRFIKGGPQREEAGMVFSRFLTYLHHVSLPSTTAPIPEMNWFVR
>NZ_CP012159.1|WP_169796764.1|9916047_9917211_-|hypothetical-protein
MANARWPWVGGLVLVTAACGGGDGAVAPGTVPSPSAMASGAPPGQRLADQLTPPPPENHLVDLIAAGGHHTCARLVEGSVWCWGRNDHGQLGWGAPTLNMPTRTLPTLVRGLTGVEELSLGQQHACARSKDGTVRCWGSNENGQLGDGTAEDRYEPVQVKGVVDAIALGAGSTATCAVLTGGSVICWGGLPGQNAVPPAAPVAQSRTAMPVSGLSDIVAVTVGRAHACALGSDGKVSCWGDNAAGQLGDGSVESQAKPVAVKKLAGVARVDAGTTSTCALLRDARVRCWGRLAEQEFGPVPKPLPGGSSVAEIAGSCARGTEGAVSCRRGDGIEVVEEGGAARIAAGEGHACLLTGEGEVRCWGSNASGQLGDGSKLVRTLPTALRW
>NZ_CP012159.1|WP_050434614.1|9915013_9915994_+|PAS-domain-containing-protein
MDTVELDALRAENQELRTRVAELEREFVDARKAQEEHTHLAATLEGILHAVPDLFFQLRSDGTIVRSISRYATDFYVPPEEFLGKRMQEVLPEPLNGAITEVLHDVGTSREMRKLEYALPRKDGSDAWYEARLIPLEQEDVIVVVRDMTAHRHDKEELRLLNAELEERVRERTEELKAETEHRLALKRQIIESQQAALRAISTPLVPIARNVVAVPLIGEIGPERSAQLLETILTGIQARGAAIVLLDVTGVPSIDESAAEAMARVARAVSLLGAELILTGIGPQVAQALVSVGVDLSGIRTTRSLEQGIAQAISRDRTRLSPPRA
>NZ_CP012159.1|WP_156339114.1|9914273_9914849_+|hypothetical-protein
MHIASSSPLLHVVSTRRSPLGSRGALALALGLGVWLAPSGAEADVLPPLRPECPEGSVARQDHTGTHCEPTTCDPDQGCTKGQSCRRVALCIETERYHPLKAGAGEQLRQIARGPCEADGSCARPATCETTPRCVPGAETTGWRSRLGCAAAPGMPGGHGVVLLGGLVAALAVVFRGRASVQGTSSPRRPR
>NZ_CP012159.1|WP_050434612.1|9913704_9914262_+|hypothetical-protein
MKTTSLTAKVAALLSAAVCLPSCAEMGAVQEEILSERGGFTESEVRLASIDEVDYCAAEVLRLRYDAAFDLLRVADARAMLNCCGRRTLKAERLGGPIGGSVEITLRDEPEPGVGRCETECAFDAAVGVLAAPSSPVSVRVVRDVVDAPGGPRVVWQGEIDPAATPQAVVVDNRRAAATCGATSP
>NZ_CP012159.1|WP_050434611.1|9913016_9913478_-|hypothetical-protein
MDNLGEVHRGDVAREGIDCAWQSLGVHVFRVERPNFLFLRNNGDLQIEELEHLCSLCEQLAVTAGPVLCLVDIARLDKLPMTTRKGAVRRPRHHYLRAVGIFGGNTVQRAVVTMATTVARLYRGEAESIPARIFATEGAARMWLDSLPPRPRG
>NZ_CP012159.1|WP_050434622.1|9925959_9927069_-|Rieske-2Fe-2S-domain-containing-protein
MGEIDHWHPVLRSDALRTRPVGVRLAGHEIVLFRAEDGALGALEDRCPHRGMRLSLGRVEGARLVCSYHGWRWSAEGRGESPGTPAMRPCARRYDVAERHGMIWVKRAGVTASFPYLEVDGWFEVGRLSHRAQAPLEVVLDNFTEVEHTPSTHLLLGYPAGRMAEVETRVAMTDEAVHVHNEGPQRKLPRVIQALFGIPDEARFVDSWITRFSPVHCVYDQYWLDPVTGERAGDALRIAVFFNPLGPEETEIVSLAYASVPPWRGLGLGALHLRLTRALVDVEVRRDCAVLAGLADKQPGLVGRALGRFDSALVASRRRIARIYRGEMGGPGSGEGAPVSSRRAPSGSNPLRSVGGPPSGSFRADRRGG
>NZ_CP012159.1|WP_050434623.1|9927088_9928285_-|NAD(P)/FAD-dependent-oxidoreductase
MVEEVGAIVVGAGPSGLAVGACLRERRIPFVLLDQAEAVGASWRRHYDRLHLHTVKQLSGLPGMPWPENAPLYPSRAQMVSYLERYAERFQLGPCLSERVIRALRDGERWVVRTPGKTRRSRALVVATGFNRVPVAPSWPGQVRFGGRILHSAIYRSGASFRGQRVLVVGMGNSGSEIALDLFEHGARPTIAVRGPVHVMPRDYRSVPAQVQAAYVFRHLPLVLSDRLAAMIQRKALGDLSPHGLRVPEEGLATHVQKGGRAPLLDVGTAAMIKQRHIEVVPAPQAFTEAGVVFSDGRALRFDAVVLATGYRAGLSEFLDGAERYTDAGGRPRWQSAPAEAPGLFFVGYCKPRAGTLLDIAREAPQVAEHIAELLGAGRPGPRRARGGEAVGGRVSAV
>NZ_CP012159.1|WP_050434624.1|9928332_9929481_-|RNA-methyltransferase
MDFFATAAKGTEPAIRDELRELRFRGVRADRGGVHFVGPMEEGFRACFELRCAQRVLAELGSFDAPNEDALYEGVGGIDWTRFLDPSRTLAVRAACRSSALTHIQFIAQKTKDAVVDQLRRHHGARPSVDREDPDVLIFVHLVRDRATVYADLGGASLHRRGFRSAAGQAPLKETLAAALLRLSGWDRERPLIDPMCGAGTIAIEGALWARNIAPGLLAAEDDAARQFGFERWGCHDEAAAKYMVELREAARARVRAEGPPVLASDIDAFVVALARGNAEVAGVQIDTRKAKVEDLQPSTPPGHVLVNPPYGERLVGGQALYREMARVFRRLRGHRVAILSGTPGIEYAMAQRLPEPPVPEPRSLSVWNGAIECRLLTYDIP
>NZ_CP012159.1|WP_156339115.1|9929935_9930106_+|hypothetical-protein
MAADAGQRPETLPASRTVEFTYGPLETADVLVLYARGMELRRSLSLRSIHRFGPGR
>NZ_CP012159.1|WP_169796766.1|9930105_9930243_+|hypothetical-protein
MTMDVSGNGLDDVVTSDMVVEAGAEQPLTRWSVGIRGSGVTSHWA
>NZ_CP012159.1|WP_050434625.1|9931217_9932123_-|DUF4398-and-OmpA-like-domain-containing-protein
MMWSRGALVLGILGMFAGGCAAAQPPQELVNARAAYERAQASRAPQLTPVPLHEAKQALDAAEVAFNDDAESQRTRDLAYIAERKAMLAESKGNTAQATAQREQAHRELAQLQGHIQARNLATAQAGMQAAQQNLAAAQGELNRTQAELSTEKKAREEAERRARDAMDKLSVASALAVKDEQRGTVITIPGSVLFTSGKFNLLPAAQQKLDQVAEALKNQSDRKMVVEGHTDSQGSDESNMTLSQNRAQSVRDYLVSRGVPSEMISASGIGETRPIADNNSPEGRANNRRVEIIVKPVEPR
>NZ_CP012159.1|WP_050434626.1|9932151_9932502_-|DUF4398-domain-containing-protein
MKSVSVLTLLIPLAAGCASLPAPTEQLASSEAAVRGAREVGAASVPQASLELRLAEEGIAKAKAAMAEDDNEKAERLLRRAQADAELALSMARETKARNEAAQVMGQVSQLRGQMK
>NZ_CP012159.1|WP_050434627.1|9933124_9935143_-|serine/threonine-protein-kinase
MNHAEILGRTIAGRFTIKRLLGEGGMAAVYVAEREGEPGEVAVKIMNGDLSADRSFVRRFQREAKAAALVKHPGSVVIHEYGTEGRLSYIVMELLVGKDLYQLLERHGVLPQVRAARILAEVCDVLQVAHDLGIIHRDLKPENIMVLPDIRVPIGERVKVLDFGIAKLLDVDETEDAGPVDSADGPPSAITRVGQIVGTPAYMSPEQCGLLPLDTRSDIYTCGVLLYQLLTGRLPFEGETPFHTASMHIHAPVPSPRALNPSIDPRLDALIQKALAKRPAERHQTARHLGASLRRLIPELSEVAIVAGPISMRQVSTRWARDSVSVPPSLEPSPATPMASTPRVAISPAVLAPPPTLATPSLQDTQASSFEPYPEDEESIESARTLVSTAAELGGAPPQVLLNDPLQRASRPSIPGSEDLPTMEHDRHAAPPEAPQRTSHLHAPSDDRPDSHAAQTPMLSWPTASALPGVPTSGNDEEHDVEDRAVTLVRPPMDSASELDPTDAVGKRAVREVKSTLRSAEEFGLKPPERRPEVQIQISAPPPTYPSDRPMSAPTEAFASQAQSPSGLPPQALKTIRINQPAGAGPNPAPPREPLFAGTPQMTPLPRVGGGTLPMPPNATGLPPMVQGFPQSPDRQGPAGGLLSGRIGLLIGFMAGMVITGIVVAVYLFVLR
>NZ_CP012159.1|WP_050434628.1|9935340_9935931_+|GNAT-family-N-acetyltransferase
MHAQVAPAPILLARTEDVRPYAAFTLEHAAESGRDGGVPHALHGPRSSEEVQRLAQERWEKSLTTPRWGRAWLLWSGPPPVRGPGGFHDPGARVVGSVELQGGRLEAELHRCTLGIGMLSAYRGQGHGRRLMETAIAWARDEAGLDHVDLGVFVGNEQAKRLYVSLGFKELTVRPDAFRVDGRSLDDIEMTLALRG
>NZ_CP012159.1|WP_050434629.1|9936153_9937314_+|MFS-transporter
MRSPLLPIFLTIFVDVFGMTMIIPVLPFFAQHLGASEVVTGALLSTYAACQLVSGPILGRISDRVGRKPTLLASQFGTMIGFLVLGSSTSLWMLFLARVISGATAGNLTVAQAYIADVTSPENRTRAFGMVGVAFGTGFLVGPALSGELAERYGYGVPGLVAAGLSLLSIVLTSTLLPARKPLEVPPQEGRLGAFQRMFQRATPRRRLLEFFFFSLSFATLTGGLSFYLQRRFSFTMKNVGHLYAFSGLVGGMVQGGFIGRMAKKMGEHRLALGGFVLMMVGYACLGALFTLPALLAVVAVSSIGSAVVRPALTTLLTKSVGPHEQGAVLGVSQSLSCMALITGPLLANSLIGRGELAAYGIAAAVFAAAGVLLGAQPPPAEITGS

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Crispr_ID: NZ_CP012159_44

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012159_44

11283471-11283811

Orphan

Consensus_repeat	Method
GAGAAGNAGNNNGCCAAGAAGGCNGA	CRT

7 spacers

The CRISPR arrays of NZ_CP012159_44

>merge|NZ_CP012159|44|11283471-11283811|CRT
GAGAAAGCGGCTCCCAGGAAGGCCGAGACGCCGACGCTCGCCAGCGAGAAGGAGCCTGCCAAGAAGGCTGAAGCGCCGAAAGCGCCCGGCGAGAAGGAGCACGCCAAGAAGGCAGAGGCCTCGACCCCTTCGAGCGAGAAGGAGCACGCCAAGAAGGCTGAAGCGCCGAAGGCTCCCAGCGAGAAGGAGCACGCCAAGAAGGCTGAAGCCTCGGCACCTTCCAGCGAGAAGCTGGCTGCCAAGAAGGCTGAGGCCACGACCCCTTCGAGCGAGAAGCAGGTCGCCAAGAAGGCCGAAACCTCGACCCCTTCGAGCGAGAAGCAGGCCGCCAAGAAGGCCGA

>NZ_CP012159|44|14|11283471-11283811|CRT
GAGAAAGCGGCTCCCAGGAAGGCCGA	GACGCCGACGCTCGCCAGC
GAGAAGGAGCCTGCCAAGAAGGCTGA	AGCGCCGAAAGCGCCCGGC
GAGAAGGAGCACGCCAAGAAGGCAGA	GGCCTCGACCCCTTCGAGC
GAGAAGGAGCACGCCAAGAAGGCTGA	AGCGCCGAAGGCTCCCAGC
GAGAAGGAGCACGCCAAGAAGGCTGA	AGCCTCGGCACCTTCCAGC
GAGAAGCTGGCTGCCAAGAAGGCTGA	GGCCACGACCCCTTCGAGC
GAGAAGCAGGTCGCCAAGAAGGCCGA	AACCTCGACCCCTTCGAGC
GAGAAGCAGGCCGCCAAGAAGGCCGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012159.1\|WP_050435544.1\|11287962_11289459_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_063796757.1\|11289504_11290338_-\|DUF1295-domain-containing-protein	unknown	unknown	gnl\|CDD\|284403
NZ_CP012159.1\|WP_050435532.1\|11269118_11269961_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_063796447.1\|11290439_11292590_-\|glycogen-debranching-enzyme-family-protein	unknown	unknown	gnl\|CDD\|283786
NZ_CP012159.1\|WP_050435533.1\|11269976_11271185_+\|methyltransferase	unknown	unknown	gnl\|CDD\|379330
NZ_CP012159.1\|WP_050435535.1\|11273657_11274404_-\|phosphocholine-cytidylyltransferase-family-protein	unknown	unknown	gnl\|CDD\|133014
NZ_CP012159.1\|WP_156339269.1\|11294949_11295447_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237000
NZ_CP012159.1\|WP_050435531.1\|11267157_11269053_+\|carboxypeptidase-regulatory-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|223864
NZ_CP012159.1\|WP_050435542.1\|11284513_11285467_+\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP012159.1\|WP_082363334.1\|11296745_11298023_-\|DUF418-domain-containing-protein	unknown	unknown	gnl\|CDD\|225193
NZ_CP012159.1\|WP_082363333.1\|11292586_11294593_-\|malto-oligosyltrehalose-trehalohydrolase	unknown	unknown	gnl\|CDD\|200464
NZ_CP012159.1\|WP_050435539.1\|11279099_11281967_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|223616
NZ_CP012159.1\|WP_050435536.1\|11274466_11275651_+\|acyl-CoA-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|173841
NZ_CP012159.1\|WP_050435540.1\|11281995_11282268_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|240291
NZ_CP012159.1\|WP_156339270.1\|11295732_11296710_+\|SUMF1/EgtB/PvdO-family-nonheme-iron-enzyme	unknown	unknown	gnl\|CDD\|224182
NZ_CP012159.1\|WP_156339268.1\|11285463_11286924_+\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP012159.1\|WP_050435537.1\|11275698_11276853_+\|acyl-CoA-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|132247
NZ_CP012159.1\|WP_050436424.1\|11286953_11287859_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_050435534.1\|11271185_11272967_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012159.1\|WP_156339384.1\|11277821_11278835_+\|sigma-54-interacting-transcriptional-regulator	unknown	unknown	gnl\|CDD\|226350

Protein	Function_ID	Function_description	E-value
NZ_CP012159.1\|WP_063796757.1\|11289504_11290338_-\|DUF1295-domain-containing-protein	gnl\|CDD\|284403	pfam06966, DUF1295, Protein of unknown function (DUF1295). This family contains a number of bacterial and eukaryotic proteins of unknown function that are approximately 300 residues long.	5.48444e-37
NZ_CP012159.1\|WP_082363333.1\|11292586_11294593_-\|malto-oligosyltrehalose-trehalohydrolase	gnl\|CDD\|200464	cd11325, AmyAc_GTHase, Alpha amylase catalytic domain found in Glycosyltrehalose trehalohydrolase (also called Maltooligosyl trehalose Trehalohydrolase). Glycosyltrehalose trehalohydrolase (GTHase) was discovered as part of a coupled system for the production of trehalose from soluble starch. In the first half of the reaction, glycosyltrehalose synthase (GTSase), an intramolecular glycosyl transferase, converts the glycosidic bond between the last two glucose residues of amylose from an alpha-1,4 bond to an alpha-1,1 bond, making a non-reducing glycosyl trehaloside. In the second half of the reaction, GTHase cleaves the alpha-1,4 glycosidic bond adjacent to the trehalose moiety to release trehalose and malto-oligosaccharide. Like isoamylase and other glycosidases that recognize branched oligosaccharides, GTHase contains an N-terminal extension and does not have the conserved calcium ion present in other alpha amylase family enzymes. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase. Glycosyltrehalose Trehalohydrolase Maltooligosyltrehalose Trehalohydrolase.	0
NZ_CP012159.1\|WP_063796447.1\|11290439_11292590_-\|glycogen-debranching-enzyme-family-protein	gnl\|CDD\|283786	pfam06202, GDE_C, Amylo-alpha-1,6-glucosidase. This family includes human glycogen branching enzyme AGL. This enzyme contains a number of distinct catalytic activities. It has been shown for the yeast homolog GDB1 that mutations in this region disrupt the enzymes Amylo-alpha-1,6-glucosidase (EC:3.2.1.33).	1.11763e-156
NZ_CP012159.1\|WP_050435533.1\|11269976_11271185_+\|methyltransferase	gnl\|CDD\|379330	pfam13679, Methyltransf_32, Methyltransferase domain. This family appears to be a methyltransferase domain.	3.02453e-13
NZ_CP012159.1\|WP_050435535.1\|11273657_11274404_-\|phosphocholine-cytidylyltransferase-family-protein	gnl\|CDD\|133014	cd02523, PC_cytidylyltransferase, Phosphocholine cytidylyltransferases catalyze the synthesis of CDP-choline. This family contains proteins similar to prokaryotic phosphocholine (P-cho) cytidylyltransferases. Phosphocholine (PC) cytidylyltransferases catalyze the transfer of a cytidine monophosphate from CTP to phosphocholine to form CDP-choline. PC is the most abundant phospholipid in eukaryotic membranes and it is also important in prokaryotic membranes. For pathogenic prokaryotes, the cell surface PC facilitates the interaction with host surface and induces attachment and invasion. In addition cell wall PC serves as scaffold for a group of choline-binding proteins that are secreted from the cells. Phosphocholine (PC) cytidylyltransferase is a key enzyme in the prokaryotic choline metabolism pathway. It has been hypothesized to consist of a choline transport system, a choline kinase, CTP:phosphocholine cytidylyltransferase, and a choline phosphotransferase that transfers P-Cho from CDP-Cho to either lipoteichoic acid or lipopolysaccharide.	2.33581e-61
NZ_CP012159.1\|WP_156339269.1\|11294949_11295447_+\|hypothetical-protein	gnl\|CDD\|237000	PRK11855, PRK11855, dihydrolipoamide acetyltransferase; Reviewed.	0.00777027
NZ_CP012159.1\|WP_050435531.1\|11267157_11269053_+\|carboxypeptidase-regulatory-like-domain-containing-protein	gnl\|CDD\|223864	COG0793, Prc, Periplasmic protease [Cell envelope biogenesis, outer membrane].	3.55774e-15
NZ_CP012159.1\|WP_050435542.1\|11284513_11285467_+\|serine/threonine-protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	3.68628e-86
NZ_CP012159.1\|WP_082363334.1\|11296745_11298023_-\|DUF418-domain-containing-protein	gnl\|CDD\|225193	COG2311, COG2311, Predicted membrane protein [Function unknown].	2.40225e-76
NZ_CP012159.1\|WP_050435539.1\|11279099_11281967_+\|AAA-family-ATPase	gnl\|CDD\|223616	COG0542, clpA, ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones].	0
NZ_CP012159.1\|WP_050435536.1\|11274466_11275651_+\|acyl-CoA-dehydrogenase-family-protein	gnl\|CDD\|173841	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26. Putative acyl-CoA dehydrogenases (ACAD). Mitochondrial acyl-CoA dehydrogenases (ACAD) catalyze the alpha, beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of ACAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. The ACD family includes the eukaryotic beta-oxidation, as well as amino acid catabolism enzymes. These enzymes share high sequence similarity, but differ in their substrate specificities. The mitochondrial ACD's are generally homotetramers and have an active site glutamate at a conserved position.	3.15949e-140
NZ_CP012159.1\|WP_050435540.1\|11281995_11282268_-\|hypothetical-protein	gnl\|CDD\|240291	PTZ00146, PTZ00146, fibrillarin; Provisional.	5.46881e-05
NZ_CP012159.1\|WP_156339270.1\|11295732_11296710_+\|SUMF1/EgtB/PvdO-family-nonheme-iron-enzyme	gnl\|CDD\|224182	COG1262, COG1262, Uncharacterized conserved protein [Function unknown].	0.000572928
NZ_CP012159.1\|WP_156339268.1\|11285463_11286924_+\|serine/threonine-protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	2.05982e-87
NZ_CP012159.1\|WP_050435537.1\|11275698_11276853_+\|acyl-CoA-dehydrogenase-family-protein	gnl\|CDD\|132247	TIGR03203, pimD_small, pimeloyl-CoA dehydrogenase, small subunit. Members of this protein family are the PimD proteins of species such as Rhodopseudomonas palustris, Bradyrhizobium japonicum. The pimFABCDE operon encodes proteins for the metabolism of straight chain dicarboxylates of seven to fourteen carbons. Especially relevant is pimeloyl-CoA, basis of the gene symbol, as it is a catabolite of benzoyl-CoA degradation, which occurs in Rhodopseudomonas palustris.	9.13206e-100
NZ_CP012159.1\|WP_156339384.1\|11277821_11278835_+\|sigma-54-interacting-transcriptional-regulator	gnl\|CDD\|226350	COG3829, RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms].	9.69821e-129

>NZ_CP012159.1|WP_050435540.1|11281995_11282268_-|hypothetical-protein
MNRSAIVVMSLLLSLPAACSLIVSPGEVRNPTLGGGGAGGEGAGGEGGAGEGGAGGEGGAGEGGSGGEGGAGEGGAGGAGGEGGEGGAST
>NZ_CP012159.1|WP_050435539.1|11279099_11281967_+|AAA-family-ATPase
MNSPRSHSELVTLRKLAQDLATRRKERLSSVHLLAAIAARGGPGGELLHDRRLDEEAILKACRSVDDEGADPIGRAMSSARDVAKRAAAKEPTALHLLLALLSDRGAGAHRALLQSGIDLARLRTAALQIAHGVVAPRRTSTRALPEGDTEALRPSWRTESPSLGGPGATGMSGNPSVTGLSSGPGMASGPGVAGVSGVTGVTRDGLGRGHASVRRGTGPGARPPNTVGPANRPPNTVGPANRPGGGLSTRPPGAVGPADRPVAVPLFPPPGWRSDAGGQGRGSTPPAPPATTIASPFGVPAAPAIPAAPAAFAGDEVRPAVAAPGQGATQPATGRPALLPPAMAARFALDRASFPVLSALGRNLTLAAAMGELDPVVGREHEIEQVLDVIAKRHANNPCLVGPAGVGKTSVARGVAQRLLEVAEPGAPPQVLVEIVTSELLAGTGARGALAERMASLRSELRETPGSVILFIDEIHELIGGGGIDEAMAELKLALSRGEICLLGATSPEEYRKTIETDPALARRFSVVEVEEPSEEDAFLLLRNVADGLGTHHKLDFTDEAIATAVSWSVRYLPGRALPDKALSILDLAGARTRRRATPVPGKSVEVGPPEVAEVVAAIADMPVERLLETDRERMLGLEQLLADRVVGHDEALGRIARVLRRNAAGIRGRRPIGSFLLLGPTGVGKTETAKAIAEALFHSPDAMTRLDLSEYAEAHAVARLVGAPPGYIGHEAGGQLTEAVRRRPYQVVLLDEIEKAHRDVLEAFLQVLDEGRMTDGRGRRVDFTNTVIVLTSNLGAAEASALRSERTVGFGRKEGGPPPERLGEAMLGAAKAALPPELYNRIDEVLCFGSLSRDEVAEIAKRLLAGLEEQLEERGVRLAVEPAAIEALLEAGGFDAAYGARPMRRTIARLIEAPLADLILRGELEEESTALVDVDEEGQVVVDALSRATAEAG
>NZ_CP012159.1|WP_156339384.1|11277821_11278835_+|sigma-54-interacting-transcriptional-regulator
MMALYALVDRVAASPLSVLLLGETGVGKEVTAEAIHNRSQRAQRPFLRLNCAALSESLLESELFGHEKGAFTGAAQTKPGLLETAEGGTVFLDEVGELPLSTQVKLLRVLEERQVLRVGGLKPRPIEVRFVAATNRDLTLEVERGTFRRDLYFRLNGISLMIPPLRERVGEIPELSRLFLSMTADRLGRPAPRLRHDALALLERHTWPGNVRELRNVVERAAVLCAGSEITPEHLLLDVASASPPPPSVSPGRPAATAAPAAGVPGRPSSSPSTADDAPPATLRGSLEPLERQRILDVLERCGGNQTQAARQLGISRGTLLSRLDAYGVPRPRKPSS
>NZ_CP012159.1|WP_050435537.1|11275698_11276853_+|acyl-CoA-dehydrogenase-family-protein
MDFDLSDEQRQLVETVQSFVKKQSPLSRLRAMREDPIGWSRDTWRQMGELGWLSISLPEAVGGLGGSFVDAALILEQLGATLVPEPMIPTLAAAAAVVRGGSEEQAARVLGPALAGEASLALAIAEAQSRFDVTDVGTRAVRSGSSYKLTGEKVWVLNGHAADHLVVSARTAGDPRDAAGVSLFVVPRDAAGLAVRSVKTMDGHHAAFLRFDGVEVGEEDRLGPEGGARDALSYAVDLGAAAACAEGLGVITTALHMTADYLKTREQFGVKIGSFQALQHRAVDMFVEAELCRSMMILAALKVDDADETERKSAISAAKVQLAWGGKQVTQQAIQLHGGIGVTDEHDIALYFKRMHVLNTVFGDEDTHLARFAQLPSFTAGVLS
>NZ_CP012159.1|WP_050435536.1|11274466_11275651_+|acyl-CoA-dehydrogenase-family-protein
MDLSFSPEHLAFREEVRTFIASAMPPHLKEKAAADSHFEHDEVMEWHKILHQKGWVAPHWPTEVGGAPLDVTSRFILTEELELAGAPGLSPFGLVMVGPLLIQFGTPEQKKRFLPKILSGEEVWCQGYSEPNAGSDLASLKTRAEDDGKGNFIVTGQKTWTTYAQYADWIFCLVRTDGSAKKQAGISFLLIDLKTPGVTVKPFLTSGGTPAFSETFFEGAVVPKENLVGPLNGGWTLAKALLGHERTLIAAVGASTRAIRKVKRIAARTQKDGQPLLDDPLFRAKIARLEIKLRGLQMANYRAIAGAQLGRAPGPEASILKIRGSEIQQQAYELAMEAMGLASLTWFNEPGVVHPEEQWVPSLFNYLRATTIYGGTNEIQKNIIAKLILGLPER
>NZ_CP012159.1|WP_050435535.1|11273657_11274404_-|phosphocholine-cytidylyltransferase-family-protein
MFYNARVKAVILAAGTSTRLRPLTDALPKCLLPVAGVPILRRSVARLIDAGVVDVVLITGFLHDRIREAMDAWFPQLGVTCVVNEAYERTNNAASLLRARAEVEGRAFVLLDGDLVFDAAVMTRVLESPHDDVLALRRAADLGAEEMKVVLAPCGRVQALGKPLDPREAAGEAIGIARLSAPTSAALFRVLHERVIGQGLVHEWYESSFQALIDRGQAFWPVDVGDAFCTEIDTPDDLRAVERVLLEG
>NZ_CP012159.1|WP_050435534.1|11271185_11272967_-|hypothetical-protein
MLDRAGRLLSSPRFPLLAALVALVLTLPALTAGPMMDDHANHHFFHPPAGEEATRPDWDLFRFQDADAAALRDRMDRGMWPWWTSPTFRLAFLRPLAALWHALDYRSAPGAYVWMHAESVLLYGLVALVAGLVYRRFFGAVAAAGLATLLFAVDDAHAMVVAWIANRHALLSALFGFLALALHDRARRDDWKPGVWLAPAGFAVSLLAGEGGTSTLAYLVAHAAFVDRAPLRARLVGLAPCGVVALAWAVTYRALGYGVAGAGFYVDPTGEPLAFLHALATRGPALLAAQLAVPPAEVWGGTLPSAQAWMPLVTLPIVAVVGLALVLGLRHDRMAAFWAVGMLLSLVPACATWPADRLLLFPGLGAFGLIASFLTASRAHLGRAGRGIVRGAVAVFVLLHLVIAVPFLPLRIVATAKVMRGEIERAAASLPEDVFRPDRTVVVVNAPDTLVGHYAMAARGAQKEQLRMPGASRLLAVAVAGRLEVARPDERTLTLTLSEGLLHDWTSLLFRSPKRPFHVGERVQVPGMVAEVTSLMEDQVRPRRVDFTFDRSLEDPSLVWLIWEGTQFVGFVPPAVGASVTLPAIDYAQAIGM
>NZ_CP012159.1|WP_050435533.1|11269976_11271185_+|methyltransferase
MSPTSLARALGVLIPTLDIVVGRVESDVPPAWCEARGFTEFLLSLGDADLARCEVEGLAACIPTLPDAPPRLVDLARETAAAIQVPPLDVTTSHAPLQHQRSVQERKLRQVEALLGAVAPLAARAQRIVDVGAGRGHFTRLASERFDVDAVGLERDAERVTTAAWLGRGTRATFVAFDAFQETLAFARDDLAVGLHACGELGDRLVSAAGAAPCDMVLVSCCLQKIGHPARAPLSQQAREAGLWLPREALGLANLTPRAMGVEASLDAMLAMRERRHALLRLLRARGLSVQVGEEMRGINRRRARDELSDLATRALALRGLPPPTAAEVEEHEAAARIEHARMRRLSLPRTMLSRLVEVTVVLDRAAALTEGGHDVQVATAFDDDVTPRNLVLLARAPRPAP
>NZ_CP012159.1|WP_050435532.1|11269118_11269961_+|hypothetical-protein
MRTALLFFACLLGLTGCAPALSTFQPAHVARKGHVQIQAGTDVSLPTGGVASLVNAAETLATIAERRELGDAEKQTLFDAGATLAVNAPSPVPHIGIAYTVLDGFEISARYSGALRLGLRYQFLEKARHGLDMSVGLGGARYTLAFPVGNVLDILELEDFQRWQFDIPLLLGTSGSWYRLWGGPKAMFTTFGTKLVLTVPETSGSSTAQRSELASFDGTAFYVGGQAGAAIGYKYVFVGFELSMAYLAASTQMQLLGQRAYGVNLDSLVVAPGIALMTEF
>NZ_CP012159.1|WP_050435531.1|11267157_11269053_+|carboxypeptidase-regulatory-like-domain-containing-protein
MSSPSRAKRPVVLVLLVGLVALLLVQFQRSASTPEGTPPQASSHPSSRPRAPRLVAPERRGPLRLPPGEITTDAAKTAGSFSGRVVSSQGVIPIAGATLTFEHQGDALTLRSGADGTFSLEPPEPGVYALALVSAEGFHPFAPAWGESPITLVARPGEAVRGLTITLDPAITYAGVVLTPAGEPAKGADVRILDAPGEAREQRFVTDDQGAFSFTAPEDALLEASHPDHAPGRARLELRAQTSRRLVLRLRPRTEAQAPETIGGRVVDAAGTPVVGATVSARWHQATVTPDGALHPGDTAITDEQGTFLLDGLDPGQYQLTAREGDRMAQPTQVASGTRDATLRLGGTGRIRGVVRARDTGKPVTAFSVVAARHLGPLARSTAAADSFFDASGAYEILDLLPGTYAVTATAAGHAASATATVDVTAGNEVSVDLTLGRGGSLHGVVVEEGNDKPIEGVRVSAEENLGPGAGPVPIISDAITDASGRFSLQGLSEGPRSIVVVASKHHGRIVSGLQIAEGRNLGPITIALTALQEGEEPRVELTGIGAVLAVKDDALVIVGEALPGGGAAAAGLGPGDAIVTIDGVGVVDLGFTGSIERIRGPEGSVTVLTVRRGGAGTPVEMAVRRLRIRS
>NZ_CP012159.1|WP_050435542.1|11284513_11285467_+|serine/threonine-protein-kinase
MAQKKEGRPLQGTRYVLVRKIGEGTTSEVHEAIGPDGEMCALKILRRLHADSPQATARHLQETHALAALAHPHVVPIDDAGVTADGRPFLAMPLLAGETLRARLDGRGPLPPSTAVRVVRELLSALGAVHRLGIVHRDVKPANVFLARNGGRRVTPGRPRRERWASVGSADVGSAILLDFGIAKLRWGAVAATTGAHVLGTPRYLAPEQILGGAVDARTDIYAVGTLLFEAIAGRGPFTEPDTIALMRAHLRQAPASLRAVAGVPAALDQVVARALAKAPARRWESADAMIAALDVAREGLAITRRPTSLVTLGGAP
>NZ_CP012159.1|WP_156339268.1|11285463_11286924_+|serine/threonine-protein-kinase
MSAAACRMSPTGTLRPGQRLPGTRLVVVKPLGQGGMGEVYEVEHVRLGRRFAVKVLHQELRDREDLAARIADEARLLGRIRHPGVVQAFDVGTTSDGRPYFVMELIAGQNLRALLGSRGALAPAEALGLLEQALGALGAVHGQGFVHRDVKLENLIVDARGRLTLIDFGVARRAAGGGPSHTLAGAIVGTPRTMAPEQCSPGAVDARADLYAAGLALYELVTGRGPFDDLRGNSQALRFAHCDRPVPSPSCFTRAGLPDTVEAIILRALEKEPGRRFQTVEEMAAAVAVAQAALEFSPGSRRRLGEVGAGVLGAAALHTGGLGASEGSADDVDAAEVYETAQATAQTEDTDATLPDLPAHPSGRALSRTHAPDPASRVARRLAPSAMSGRRLMTPERRRRGRSSPARALPRRHRAARPIAQKSPWLASPSPALTLGVCAIFLASMALALTLSAPREVDRQRETDGCKVAGRGPFFSPIPRGDPEES
>NZ_CP012159.1|WP_050436424.1|11286953_11287859_+|hypothetical-protein
MAMALLGGAAGCGGSAQKSGAAFSGSADMGSAPVAAEVPMNGAPAPVPAGVPPLEPSSEDVPGRSLGSVEGGVARQRPRPESVDRPGLATQWGETRHSRITTVSFTRAEPTNPFAMTSLFYNDEEGAQAMASAAGFRRLAPQAFTLGGGAVAIGLRGEGGQFLSGFVAGEKTFAMGQQGQRYSIVLRNLTPNRIECVVSVDGLDVLDGQPAAFSKRGYLLDPHSEVEIDGFRQSMDTVAAFRFGSVRGSYANQKHGDTRNVGVIGVALFHERGTTPWNAGELQRRQDANPFPGQFATPPGR
>NZ_CP012159.1|WP_050435544.1|11287962_11289459_+|hypothetical-protein
MRLLPSIALGALLLSCGPAAPPSLTTVQLPDASRATAPPSDAERKLAGADTEKLLHAALCGQRTPCHVLRNRPAGLNEQGMPLSVVSLWTGEQRWSDEDASENEGEEGSAQKGASRDATALPADLRLEQTEREDVTSPGLGGCHRFDYWLVTWRDGAIAAKSPLLRICNDGHGASGVGEDTVTIGDNRFTHTVMGGSAWRWIEVSERRLSPLSERRTASSMWWNIASNVSESRWSWDDFAGGTTWYSPLCKADGSFDRDGDAGDVGPGDRGGREYAFATLPLVEVDPAYTASGWKSAGLGRCALAVDATGKGGFVTHGMPGQASDASLRVVATAPDTLLIEVEDDHLVGPGKNWVTDDHLEIWLSAAIPSASSHCVTPPEELLQWGIRVTDGKVFAGAGKPHPTALRVERAAPQAGESTLRFKVVLPSGQSAVTVVYSDSDDGRKQERLIATSKLVHGKGLTLGTITKLPVTRVTCGVKEGRLTPMEKPEPPISFTEE
>NZ_CP012159.1|WP_063796757.1|11289504_11290338_-|DUF1295-domain-containing-protein
MAAATLCWILQTLTRNYSWVDRLWSIMPPVYAWIFALWVEPGQAPVPRLVLVAGLVTAWGARLTFNFARKGGYRPTEEDYRWPIVRAWLAEHDPTHPLGRELFSLLFITAYQHLLIGLFTIPPMFLVHTLAQQHAVPLGASDILAAVAFLAFLLGETIADQQQWRFHQQKARLSPDERARAGGDLARGFLTAGVFRYARHLNFFCEMGLWWVVGLFPVIAGAPWLHWAWIGPFLLTLLFQGSTWLTELLSARKYPAYRDYQRTTSRLLPLWPGKPLD
>NZ_CP012159.1|WP_063796447.1|11290439_11292590_-|glycogen-debranching-enzyme-family-protein
MTSELPCRRVDLLGDAPGAGADPEHGEDPASAEWLVTNGLGGYASGTLAGLITRRFHGLLIAALPAPHGRTMMLNHLREVAHAPGERGHCGELVSLGAQSEPGAAHPDCGLAKLIEFKLDAGMPVWRYELPQGAILEKRLLMVHGQNTTHITYSLEGNASICLELQPWVNFRPHEGSLERPLDANYSLTIIAARYELTGDDDLPSLRLEFYGQPAGIRIDGKPIRDVHYRIERSRGYDASGDLYTPGLFRLELDPGSEVTLVASTESWEVIHALPPAEARRAEQERRKRLLLATEPALREGLAAELVLAADQFLITPAGRVADAARCRASGDEIRTVIAGYPWFTDWGRDTMISLEGLTLTTGRHKEAGYILRTFGKYVRDGLIPNMFPDNQNAGLYHTADATLWFFHAIDRYLATTGDDETLQILLPTLRDIIARHLAGTRFGIGVDPADGLLRQGQEGYQLTWMDAKVGDLVVTPRRGKAVELNALWYNALCLMGRWAECGGEDDETCDYLAHAERARAAFNARFWYAKGQHLYDVIDGEQGDDAAFRPNQLFAISLPHPILDRARWEPVVRQVKEKLLTPYGLRSLSPDHPDYRPSYFGNLRMRDMAYHQGTVWGWLIGPFVDAWLKVHPHARDEARGFVLALEPHLSEAGVGTISEIFDAEPPFVPRGCVAQAWSVAEALRCLAMTSNSGDGSERQDERTGRLASSSLIPPS
>NZ_CP012159.1|WP_082363333.1|11292586_11294593_-|malto-oligosyltrehalose-trehalohydrolase
MQGAAVSRRLPVGAEPTAGGVSFRVWAPRREVVRVVVSAPGEAPLTVQLDVEGNGYFSKLVQGLGVGTRYAFRLDDDAQLYPDPASRWQPEGPHLPSEVVDPSAFTWRVDAFPGLSLKGQVLYEMHIGTFTPEGTWEAAMQELPALAALGITALEIMPIAEFPGRFGWGYDGVSLFAPYHHYGTPDDVRRFVDQAHALGLGVILDVVFNHLGPDGNYLGQFSADYFSNRYKTDWGAAINFDGERSAAVREFFLANAGYWIDEYRFDGLRIDATQCIFDSSPEHILADVAQRVRAAGGRRATLLIAENEPQDSRIVRAVEAGGFGLDALWNDDFHHSAMAALTGHNGAYYSETRGAPQELVSVAKWGYLYQGQRYAWQKQRRGTASLDLAPAQFVAFLQNHDQVANSARGRRVHALSSPGRVRALTAFTLLIPATPMLFQGQECNSSKPFLYFADHHPELATLVSRGRADFLVQFPTLQDPEAQRRLDEPADPATFHQCKLDPLERERNAEAVSLHRDLLTLRREDPTFSAQRPRGVDGAVLGPEAFVLRFFGERGEDRLLLVNLGLDLRLVPAPEPLLAPPSGRRWGLLWSSEAPRYGGEGTPPVETEAEGWFLPGHAAVVLRPVQVPQVVAGVACVAGVVAKAEHPETEVEASAHAEATNEEKENAR
>NZ_CP012159.1|WP_156339269.1|11294949_11295447_+|hypothetical-protein
MKMKSFTLVALLLGGSLFSLGCSANLQDTGTEGALKAVEAADEQAADEQAADEQAADEQAADEQAADEQAAHAATRGEPITTCGGFTGQPCGGTNECVDDPSDDCDPQNGGSDCGGICVGAMCGGFAGIPCSRDHVCLDDPRDDCDPENGGADCPGTCIFAGDPE
>NZ_CP012159.1|WP_156339270.1|11295732_11296710_+|SUMF1/EgtB/PvdO-family-nonheme-iron-enzyme
MIQASVLTLPSTPAPAPGDGPLGALEGRPDGADPAADTQAQPAEEPSPPAPCPPEMALIGKYCVDRWEGHLVVEGGDPATGQELVHPYSQRPEAGVRYAARSAPDVYPQAFISRVESKAACVASGKRLCSRQEWMQACRGRGTYRYPYAQRGERGKCSTGKPHLLSALFGAKGRGWTYDDFNSPKLALEPGYLAKTAEYEGCASELGVHDMVGNLHEWVSDSVDQHFVDRLAEEIERRSQPWHEGNGVFMGGFFSTTNELGPGCYYTTIAHEPAYHDYSTGFRCCADATLPPEPEKPTAGKGKTSKRPQTAPVEDAVAAAARRGS
>NZ_CP012159.1|WP_082363334.1|11296745_11298023_-|DUF418-domain-containing-protein
MNQESLPSPGAVRAERALAPDETPSAAEPTAPADRLDVLDALRGVALFGILAVNLTYWFRDHPSRSVLDPDLFRGVADRAAEFAVITFFNGKFLTLFAMLFGAGLALQREHALARGGGFHGRALRRLAVLLLFGVAHVGLLWMGDVLHVYALLGPLLLLFLGCTTRTLTFWAALVFALPPILVTCRLVVGGLARAVPPVEELESARQHVEVALQVYGHGGWLEVARYRIHDYVQYLPTLLPAAYAAFGSFLVGVLVWRSGVVQEPARHRASLRRMLIGGLVLGVGVTLLEGTMSQRVPSGWRGLVDLVSAFQPAVYVAQALAYGAGVLLLLQRPGWGARFSWVTAAGRMALSCYLLQSLLCGIIFYGYGFGLYGHLGPAAGLLVVFGIYAVELALSRWWLSRYRFGPLEWLWRTLTYGKRQPMRS

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP012159_28	28.7\|6879980\|18\|NZ_CP012159\|CRT	6879980-6879997	18	NZ_CP012159.1	6880023-6880040	0	1.0
NZ_CP012159_29	29.25\|7097391\|37\|NZ_CP012159\|CRISPRCasFinder,CRT	7097391-7097427	37	NZ_CP012159.1	2474149-2474185	0	1.0
NZ_CP012159_29	29.75\|7097392\|37\|NZ_CP012159\|PILER-CR	7097392-7097428	37	NZ_CP012159.1	2474149-2474185	0	1.0
NZ_CP012159_28	28.5\|6879894\|18\|NZ_CP012159\|CRT	6879894-6879911	18	NZ_CP012159.1	6880023-6880040	1	0.944
NZ_CP012159_28	28.6\|6879937\|18\|NZ_CP012159\|CRT	6879937-6879954	18	NZ_CP012159.1	6880023-6880040	1	0.944
NZ_CP012159_30	30.16\|7110295\|35\|NZ_CP012159\|CRISPRCasFinder,CRT,PILER-CR	7110295-7110329	35	NZ_CP012159.1	4233801-4233835	1	0.971
NZ_CP012159_44	44.3\|11283587\|19\|NZ_CP012159\|CRT	11283587-11283605	19	NZ_CP012159.1	1888861-1888879	1	0.947
NZ_CP012159_44	44.3\|11283587\|19\|NZ_CP012159\|CRT	11283587-11283605	19	NZ_CP012159.1	3362966-3362984	1	0.947
NZ_CP012159_44	44.3\|11283587\|19\|NZ_CP012159\|CRT	11283587-11283605	19	NZ_CP012159.1	5348487-5348505	1	0.947
NZ_CP012159_44	44.6\|11283722\|19\|NZ_CP012159\|CRT	11283722-11283740	19	NZ_CP012159.1	3362966-3362984	1	0.947
NZ_CP012159_44	44.6\|11283722\|19\|NZ_CP012159\|CRT	11283722-11283740	19	NZ_CP012159.1	5025573-5025591	1	0.947
NZ_CP012159_44	44.6\|11283722\|19\|NZ_CP012159\|CRT	11283722-11283740	19	NZ_CP012159.1	5437957-5437975	1	0.947
NZ_CP012159_10	10.5\|3384012\|21\|NZ_CP012159\|CRT	3384012-3384032	21	NZ_CP012159.1	1641040-1641060	2	0.905
NZ_CP012159_34	34.1\|7770925\|22\|NZ_CP012159\|CRT	7770925-7770946	22	NZ_CP012159.1	3650221-3650242	2	0.909

1. spacer 28.7|6879980|18|NZ_CP012159|CRT matches to position: 6880023-6880040, mismatch: 0, identity: 1.0

aggtcagggggaacgctc	CRISPR spacer
aggtcagggggaacgctc	Protospacer
******************

2. spacer 29.25|7097391|37|NZ_CP012159|CRISPRCasFinder,CRT matches to position: 2474149-2474185, mismatch: 0, identity: 1.0

gtcgtgatagcgggtgcagggcgcgctggtttgagcg	CRISPR spacer
gtcgtgatagcgggtgcagggcgcgctggtttgagcg	Protospacer
*************************************

3. spacer 29.75|7097392|37|NZ_CP012159|PILER-CR matches to position: 2474149-2474185, mismatch: 0, identity: 1.0

gtcgtgatagcgggtgcagggcgcgctggtttgagcg	CRISPR spacer
gtcgtgatagcgggtgcagggcgcgctggtttgagcg	Protospacer
*************************************

4. spacer 28.5|6879894|18|NZ_CP012159|CRT matches to position: 6880023-6880040, mismatch: 1, identity: 0.944

aggccagggggaacgctc	CRISPR spacer
aggtcagggggaacgctc	Protospacer
***.**************

5. spacer 28.6|6879937|18|NZ_CP012159|CRT matches to position: 6880023-6880040, mismatch: 1, identity: 0.944

aggccagggggaacgctc	CRISPR spacer
aggtcagggggaacgctc	Protospacer
***.**************

6. spacer 30.16|7110295|35|NZ_CP012159|CRISPRCasFinder,CRT,PILER-CR matches to position: 4233801-4233835, mismatch: 1, identity: 0.971

agcgtctcgagggtggcgtaggcggcggtggcgtc	CRISPR spacer
agtgtctcgagggtggcgtaggcggcggtggcgtc	Protospacer
**.********************************

7. spacer 44.3|11283587|19|NZ_CP012159|CRT matches to position: 1888861-1888879, mismatch: 1, identity: 0.947

ggcctcgaccccttcgagc	CRISPR spacer
ggcctcggccccttcgagc	Protospacer
*******.***********

8. spacer 44.3|11283587|19|NZ_CP012159|CRT matches to position: 3362966-3362984, mismatch: 1, identity: 0.947

ggcctcgaccccttcgagc	CRISPR spacer
ggccgcgaccccttcgagc	Protospacer
**** **************

9. spacer 44.3|11283587|19|NZ_CP012159|CRT matches to position: 5348487-5348505, mismatch: 1, identity: 0.947

ggcctcgaccccttcgagc	CRISPR spacer
ggcctcgaccgcttcgagc	Protospacer
********** ********

10. spacer 44.6|11283722|19|NZ_CP012159|CRT matches to position: 3362966-3362984, mismatch: 1, identity: 0.947

ggccacgaccccttcgagc	CRISPR spacer
ggccgcgaccccttcgagc	Protospacer
****.**************

11. spacer 44.6|11283722|19|NZ_CP012159|CRT matches to position: 5025573-5025591, mismatch: 1, identity: 0.947

ggccacgaccccttcgagc	CRISPR spacer
ggccacgaccccttccagc	Protospacer
*************** ***

12. spacer 44.6|11283722|19|NZ_CP012159|CRT matches to position: 5437957-5437975, mismatch: 1, identity: 0.947

ggccacgaccccttcgagc	CRISPR spacer
ggcgacgaccccttcgagc	Protospacer
*** ***************

13. spacer 10.5|3384012|21|NZ_CP012159|CRT matches to position: 1641040-1641060, mismatch: 2, identity: 0.905

gccagcaccgcgaacgtcggc	CRISPR spacer
gccagcaccgcgaacggccgc	Protospacer
**************** * **

14. spacer 34.1|7770925|22|NZ_CP012159|CRT matches to position: 3650221-3650242, mismatch: 2, identity: 0.909

ggtgaaactgggtgtgtcgacg	CRISPR spacer
ggtgaaactgggtgcgtcggcg	Protospacer
**************.****.**

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP012159_44	44.1\|11283497\|19\|NZ_CP012159\|CRT	11283497-11283515	19	NZ_CP021071	Mesorhizobium sp. WSM1497 plasmid pWSM1497, complete sequence	55873-55891	0	1.0
NZ_CP012159_44	44.2\|11283542\|19\|NZ_CP012159\|CRT	11283542-11283560	19	NZ_CP033222	Parasedimentitalea marina strain W43 plasmid pW43C, complete sequence	63957-63975	0	1.0
NZ_CP012159_10	10.5\|3384012\|21\|NZ_CP012159\|CRT	3384012-3384032	21	NZ_CP043441	Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence	539158-539178	1	0.952
NZ_CP012159_18	18.3\|4793196\|22\|NZ_CP012159\|CRISPRCasFinder	4793196-4793217	22	NZ_CP024423	Paracoccus yeei strain TT13 plasmid pTT13-1, complete sequence	231461-231482	2	0.909
NZ_CP012159_18	18.3\|4793196\|22\|NZ_CP012159\|CRISPRCasFinder	4793196-4793217	22	NZ_CP015597	Mycobacterium sp. YC-RL4 plasmid pMYC1, complete sequence	52522-52543	2	0.909
NZ_CP012159_30	30.6\|7109593\|24\|NZ_CP012159\|CRISPRCasFinder,CRT	7109593-7109616	24	NZ_CP009292	Novosphingobium pentaromativorans US6-1 plasmid pLA3, complete sequence	673338-673361	2	0.917
NZ_CP012159_37	37.3\|8340447\|21\|NZ_CP012159\|CRT	8340447-8340467	21	NZ_CP032685	Rhizobium sp. CCGE531 plasmid pRCCGE531d, complete sequence	636738-636758	2	0.905
NZ_CP012159_37	37.3\|8340447\|21\|NZ_CP012159\|CRT	8340447-8340467	21	NZ_CP032690	Rhizobium sp. CCGE532 plasmid pRCCGE532d, complete sequence	636287-636307	2	0.905
NZ_CP012159_38	38.6\|8803406\|22\|NZ_CP012159\|CRT	8803406-8803427	22	NZ_CP020702	Streptomyces tsukubensis strain NRRL 18488 plasmid pSTS2, complete sequence	4047-4068	2	0.909
NZ_CP012159_30	30.73\|7109384\|24\|NZ_CP012159\|CRT	7109384-7109407	24	CP000662	Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01, complete sequence	601175-601198	3	0.875
NZ_CP012159_30	30.73\|7109384\|24\|NZ_CP012159\|CRT	7109384-7109407	24	NZ_CP031752	Rhodobacter sphaeroides strain EBL0706 plasmid p.A, complete sequence	106924-106947	3	0.875
NZ_CP012159_30	30.73\|7109384\|24\|NZ_CP012159\|CRT	7109384-7109407	24	CP000666	Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA05, complete sequence	6824-6847	3	0.875
NZ_CP012159_6	6.1\|2120910\|25\|NZ_CP012159\|CRISPRCasFinder	2120910-2120934	25	NZ_CP049157	Caballeronia sp. SBC1 plasmid pSBC1_1, complete sequence	1680924-1680948	4	0.84
NZ_CP012159_6	6.1\|2120910\|25\|NZ_CP012159\|CRISPRCasFinder	2120910-2120934	25	NZ_CP049317	Caballeronia sp. SBC2 plasmid pSBC2-1, complete sequence	1954122-1954146	4	0.84
NZ_CP012159_30	30.6\|7109593\|24\|NZ_CP012159\|CRISPRCasFinder,CRT	7109593-7109616	24	MT553342	Microbacterium phage Kelcole, complete genome	58374-58397	4	0.833
NZ_CP012159_30	30.6\|7109593\|24\|NZ_CP012159\|CRISPRCasFinder,CRT	7109593-7109616	24	NC_048068	Microbacterium phage OneinaGillian, complete genome	57312-57335	4	0.833
NZ_CP012159_30	30.6\|7109593\|24\|NZ_CP012159\|CRISPRCasFinder,CRT	7109593-7109616	24	MT310894	Microbacterium phage Tempo, complete genome	58483-58506	4	0.833
NZ_CP012159_30	30.73\|7109384\|24\|NZ_CP012159\|CRT	7109384-7109407	24	NZ_CP009572	Sphingomonas taxi strain ATCC 55669 plasmid STP1, complete sequence	121920-121943	4	0.833
NZ_CP012159_42	42.2\|9724578\|28\|NZ_CP012159\|CRT	9724578-9724605	28	NZ_CP021653	Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence	715637-715664	4	0.857
NZ_CP012159_42	42.2\|9724578\|28\|NZ_CP012159\|CRT	9724578-9724605	28	NZ_CP012940	Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence	1587067-1587094	4	0.857
NZ_CP012159_42	42.2\|9724578\|28\|NZ_CP012159\|CRT	9724578-9724605	28	NZ_CP012944	Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence	1458576-1458603	4	0.857
NZ_CP012159_42	42.2\|9724578\|28\|NZ_CP012159\|CRT	9724578-9724605	28	NZ_CP012688	Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence	715645-715672	4	0.857
NZ_CP012159_42	42.2\|9724578\|28\|NZ_CP012159\|CRT	9724578-9724605	28	NC_017575	Ralstonia solanacearum Po82 megaplasmid, complete sequence	415279-415306	4	0.857
NZ_CP012159_42	42.2\|9724578\|28\|NZ_CP012159\|CRT	9724578-9724605	28	NZ_CP026308	Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence	415275-415302	4	0.857
NZ_CP012159_42	42.2\|9724578\|28\|NZ_CP012159\|CRT	9724578-9724605	28	CP047139	Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence	734037-734064	4	0.857
NZ_CP012159_42	42.2\|9724578\|28\|NZ_CP012159\|CRT	9724578-9724605	28	NZ_CP051295	Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence	1570531-1570558	4	0.857
NZ_CP012159_42	42.2\|9724578\|28\|NZ_CP012159\|CRT	9724578-9724605	28	CP047137	Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence	700257-700284	4	0.857
NZ_CP012159_42	42.3\|9724626\|28\|NZ_CP012159\|CRT	9724626-9724653	28	NZ_CP021653	Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence	715637-715664	4	0.857
NZ_CP012159_42	42.3\|9724626\|28\|NZ_CP012159\|CRT	9724626-9724653	28	NZ_CP012940	Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence	1587067-1587094	4	0.857
NZ_CP012159_42	42.3\|9724626\|28\|NZ_CP012159\|CRT	9724626-9724653	28	NZ_CP012944	Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence	1458576-1458603	4	0.857
NZ_CP012159_42	42.3\|9724626\|28\|NZ_CP012159\|CRT	9724626-9724653	28	NZ_CP012688	Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence	715645-715672	4	0.857
NZ_CP012159_42	42.3\|9724626\|28\|NZ_CP012159\|CRT	9724626-9724653	28	NC_017575	Ralstonia solanacearum Po82 megaplasmid, complete sequence	415279-415306	4	0.857
NZ_CP012159_42	42.3\|9724626\|28\|NZ_CP012159\|CRT	9724626-9724653	28	NZ_CP026308	Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence	415275-415302	4	0.857
NZ_CP012159_42	42.3\|9724626\|28\|NZ_CP012159\|CRT	9724626-9724653	28	CP047139	Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence	734037-734064	4	0.857
NZ_CP012159_42	42.3\|9724626\|28\|NZ_CP012159\|CRT	9724626-9724653	28	NZ_CP051295	Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence	1570531-1570558	4	0.857
NZ_CP012159_42	42.3\|9724626\|28\|NZ_CP012159\|CRT	9724626-9724653	28	CP047137	Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence	700257-700284	4	0.857
NZ_CP012159_12	12.1\|3431033\|25\|NZ_CP012159\|CRISPRCasFinder	3431033-3431057	25	NZ_CP007510	Pseudomonas stutzeri strain 19SMN4 plasmid pLIB119, complete plasmid	91471-91495	5	0.8
NZ_CP012159_30	30.73\|7109384\|24\|NZ_CP012159\|CRT	7109384-7109407	24	NC_007491	Rhodococcus erythropolis PR4 plasmid pREL1, complete sequence	261129-261152	5	0.792
NZ_CP012159_30	30.73\|7109384\|24\|NZ_CP012159\|CRT	7109384-7109407	24	NZ_CP021355	Rhodococcus sp. S2-17 plasmid pRB98, complete sequence	307234-307257	5	0.792
NZ_CP012159_30	30.73\|7109384\|24\|NZ_CP012159\|CRT	7109384-7109407	24	NZ_CP050125	Rhodococcus erythropolis strain KB1 plasmid plas1, complete sequence	46682-46705	5	0.792
NZ_CP012159_37	37.2\|8340402\|27\|NZ_CP012159\|CRT	8340402-8340428	27	NZ_CP040819	Paraoceanicella profunda strain D4M1 plasmid pD4M1A, complete sequence	157222-157248	5	0.815
NZ_CP012159_42	42.4\|9724674\|28\|NZ_CP012159\|CRT	9724674-9724701	28	NZ_CP020539	Sphingobium herbicidovorans strain MH plasmid pMSHV, complete sequence	828146-828173	5	0.821
NZ_CP012159_22	22.1\|5458148\|29\|NZ_CP012159\|PILER-CR	5458148-5458176	29	CP040041	Acinetobacter baumannii strain VB958 plasmid unnamed1, complete sequence	282276-282304	6	0.793
NZ_CP012159_30	30.3\|7109384\|31\|NZ_CP012159\|CRISPRCasFinder	7109384-7109414	31	NZ_CP015008	Aminobacter aminovorans strain KCTC 2477 plasmid pAA03, complete sequence	19749-19779	6	0.806
NZ_CP012159_30	30.15\|7110224\|35\|NZ_CP012159\|CRISPRCasFinder,CRT,PILER-CR	7110224-7110258	35	KJ680225	Uncultured bacterium plasmid PLAsvaD clone PLAsvaD-1, complete sequence	29177-29211	6	0.829
NZ_CP012159_42	42.2\|9724578\|28\|NZ_CP012159\|CRT	9724578-9724605	28	NZ_CP022367	Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence	661802-661829	6	0.786
NZ_CP012159_42	42.2\|9724578\|28\|NZ_CP012159\|CRT	9724578-9724605	28	NZ_CP024423	Paracoccus yeei strain TT13 plasmid pTT13-1, complete sequence	110934-110961	6	0.786
NZ_CP012159_42	42.2\|9724578\|28\|NZ_CP012159\|CRT	9724578-9724605	28	NZ_CP020441	Paracoccus yeei strain FDAARGOS_252 plasmid unnamed1, complete sequence	92696-92723	6	0.786
NZ_CP012159_42	42.2\|9724578\|28\|NZ_CP012159\|CRT	9724578-9724605	28	NC_022599	Micrococcus sp. V7 plasmid pLMV7, complete sequence	16090-16117	6	0.786
NZ_CP012159_42	42.2\|9724578\|28\|NZ_CP012159\|CRT	9724578-9724605	28	NZ_CP016821	Rhodococcus sp. p52 plasmid pDF01, complete sequence	153657-153684	6	0.786
NZ_CP012159_42	42.2\|9724578\|28\|NZ_CP012159\|CRT	9724578-9724605	28	NZ_CP031079	Paracoccus yeei strain CCUG 32053 plasmid pYEE1, complete sequence	72641-72668	6	0.786
NZ_CP012159_42	42.3\|9724626\|28\|NZ_CP012159\|CRT	9724626-9724653	28	NZ_CP022367	Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence	661802-661829	6	0.786
NZ_CP012159_42	42.3\|9724626\|28\|NZ_CP012159\|CRT	9724626-9724653	28	NZ_CP024423	Paracoccus yeei strain TT13 plasmid pTT13-1, complete sequence	110934-110961	6	0.786
NZ_CP012159_42	42.3\|9724626\|28\|NZ_CP012159\|CRT	9724626-9724653	28	NZ_CP020441	Paracoccus yeei strain FDAARGOS_252 plasmid unnamed1, complete sequence	92696-92723	6	0.786
NZ_CP012159_42	42.3\|9724626\|28\|NZ_CP012159\|CRT	9724626-9724653	28	NC_022599	Micrococcus sp. V7 plasmid pLMV7, complete sequence	16090-16117	6	0.786
NZ_CP012159_42	42.3\|9724626\|28\|NZ_CP012159\|CRT	9724626-9724653	28	NZ_CP016821	Rhodococcus sp. p52 plasmid pDF01, complete sequence	153657-153684	6	0.786
NZ_CP012159_42	42.3\|9724626\|28\|NZ_CP012159\|CRT	9724626-9724653	28	NZ_CP031079	Paracoccus yeei strain CCUG 32053 plasmid pYEE1, complete sequence	72641-72668	6	0.786
NZ_CP012159_42	42.4\|9724674\|28\|NZ_CP012159\|CRT	9724674-9724701	28	NZ_CP010326	Pantoea sp. PSNIH1 plasmid pPSP-3a9, complete sequence	190767-190794	6	0.786
NZ_CP012159_42	42.4\|9724674\|28\|NZ_CP012159\|CRT	9724674-9724701	28	NZ_LT853887	Xanthomonas fragariae strain PD5205 plasmid pPD5205-21, complete sequence	801-828	6	0.786
NZ_CP012159_42	42.4\|9724674\|28\|NZ_CP012159\|CRT	9724674-9724701	28	NZ_CP016835	Xanthomonas fragariae isolate Fap29 plasmid pFap29-2, complete sequence	6740-6767	6	0.786
NZ_CP012159_42	42.4\|9724674\|28\|NZ_CP012159\|CRT	9724674-9724701	28	NC_008537	Arthrobacter sp. FB24 plasmid 1, complete sequence	93964-93991	6	0.786
NZ_CP012159_42	42.4\|9724674\|28\|NZ_CP012159\|CRT	9724674-9724701	28	NC_008538	Arthrobacter sp. FB24 plasmid 2, complete sequence	37268-37295	6	0.786
NZ_CP012159_42	42.4\|9724674\|28\|NZ_CP012159\|CRT	9724674-9724701	28	NC_008539	Arthrobacter sp. FB24 plasmid 3, complete sequence	33049-33076	6	0.786
NZ_CP012159_42	42.4\|9724674\|28\|NZ_CP012159\|CRT	9724674-9724701	28	NZ_LT853881	Xanthomonas fragariae strain NBC2815 plasmid pNBC2815-21, complete sequence	801-828	6	0.786
NZ_CP012159_42	42.4\|9724674\|28\|NZ_CP012159\|CRT	9724674-9724701	28	NZ_CP015739	Shinella sp. HZN7 plasmid pShin-03, complete sequence	21269-21296	6	0.786
NZ_CP012159_42	42.4\|9724674\|28\|NZ_CP012159\|CRT	9724674-9724701	28	NZ_CP020952	Rhizobium sp. CIAT894 plasmid pRheCIAT894e, complete sequence	153197-153224	6	0.786
NZ_CP012159_42	42.4\|9724674\|28\|NZ_CP012159\|CRT	9724674-9724701	28	NZ_CP010729	Phaeobacter inhibens strain P88 plasmid pP88_d, complete sequence	39068-39095	6	0.786
NZ_CP012159_42	42.4\|9724674\|28\|NZ_CP012159\|CRT	9724674-9724701	28	NZ_CP013556	Rhizobium phaseoli strain N931 plasmid pRphaN931d, complete sequence	907813-907840	6	0.786
NZ_CP012159_42	42.4\|9724674\|28\|NZ_CP012159\|CRT	9724674-9724701	28	NZ_CP013562	Rhizobium phaseoli strain N841 plasmid pRphaN841e, complete sequence	883170-883197	6	0.786
NZ_CP012159_42	42.4\|9724674\|28\|NZ_CP012159\|CRT	9724674-9724701	28	NZ_CP013567	Rhizobium phaseoli strain N831 plasmid pRphaN831d, complete sequence	907813-907840	6	0.786
NZ_CP012159_42	42.4\|9724674\|28\|NZ_CP012159\|CRT	9724674-9724701	28	NZ_CP035002	Rhizobium acidisoli strain FH23 plasmid pRapFH23d, complete sequence	314566-314593	6	0.786
NZ_CP012159_24	24.1\|5707948\|31\|NZ_CP012159\|CRISPRCasFinder	5707948-5707978	31	CP054927	Streptomyces fulvissimus strain NA06532 plasmid unnamed1, complete sequence	267693-267723	7	0.774
NZ_CP012159_29	29.27\|7097535\|34\|NZ_CP012159\|CRISPRCasFinder,CRT	7097535-7097568	34	NZ_LR134450	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 8, complete sequence	226237-226270	7	0.794
NZ_CP012159_29	29.39\|7098399\|37\|NZ_CP012159\|CRISPRCasFinder,CRT	7098399-7098435	37	NZ_CP022081	Burkholderia cepacia strain FDAARGOS_345 plasmid unnamed1, complete sequence	56311-56347	7	0.811
NZ_CP012159_29	29.39\|7098399\|37\|NZ_CP012159\|CRISPRCasFinder,CRT	7098399-7098435	37	NZ_CP012984	Burkholderia cepacia ATCC 25416 strain UCB 717 plasmid pBC25416	3147-3183	7	0.811
NZ_CP012159_29	29.39\|7098399\|37\|NZ_CP012159\|CRISPRCasFinder,CRT	7098399-7098435	37	NZ_CP012984	Burkholderia cepacia ATCC 25416 strain UCB 717 plasmid pBC25416	207317-207353	7	0.811
NZ_CP012159_29	29.39\|7098399\|37\|NZ_CP012159\|CRISPRCasFinder,CRT	7098399-7098435	37	NZ_CP034556	Burkholderia cepacia ATCC 25416 plasmid unnamed1, complete sequence	106327-106363	7	0.811
NZ_CP012159_29	29.77\|7097536\|34\|NZ_CP012159\|PILER-CR	7097536-7097569	34	NZ_LR134450	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 8, complete sequence	226237-226270	7	0.794
NZ_CP012159_29	29.89\|7098400\|37\|NZ_CP012159\|PILER-CR	7098400-7098436	37	NZ_CP022081	Burkholderia cepacia strain FDAARGOS_345 plasmid unnamed1, complete sequence	56311-56347	7	0.811
NZ_CP012159_29	29.89\|7098400\|37\|NZ_CP012159\|PILER-CR	7098400-7098436	37	NZ_CP012984	Burkholderia cepacia ATCC 25416 strain UCB 717 plasmid pBC25416	3147-3183	7	0.811
NZ_CP012159_29	29.89\|7098400\|37\|NZ_CP012159\|PILER-CR	7098400-7098436	37	NZ_CP012984	Burkholderia cepacia ATCC 25416 strain UCB 717 plasmid pBC25416	207317-207353	7	0.811
NZ_CP012159_29	29.89\|7098400\|37\|NZ_CP012159\|PILER-CR	7098400-7098436	37	NZ_CP034556	Burkholderia cepacia ATCC 25416 plasmid unnamed1, complete sequence	106327-106363	7	0.811
NZ_CP012159_30	30.3\|7109384\|31\|NZ_CP012159\|CRISPRCasFinder	7109384-7109414	31	NZ_CP025986	Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence	1212950-1212980	7	0.774
NZ_CP012159_30	30.9\|7109797\|34\|NZ_CP012159\|CRISPRCasFinder,CRT,PILER-CR	7109797-7109830	34	NC_012586	Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence	1070679-1070712	7	0.794
NZ_CP012159_30	30.55\|7113109\|35\|NZ_CP012159\|CRISPRCasFinder,CRT,PILER-CR	7113109-7113143	35	NZ_CP009293	Novosphingobium pentaromativorans US6-1 plasmid pLA4, complete sequence	292636-292670	7	0.8
NZ_CP012159_31	31.1\|7334061\|31\|NZ_CP012159\|CRISPRCasFinder	7334061-7334091	31	NZ_CP010698	Phaeobacter inhibens strain P24 plasmid pP24_b, complete sequence	1386-1416	7	0.774
NZ_CP012159_42	42.2\|9724578\|28\|NZ_CP012159\|CRT	9724578-9724605	28	NZ_CP032322	Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence	1797942-1797969	7	0.75
NZ_CP012159_42	42.2\|9724578\|28\|NZ_CP012159\|CRT	9724578-9724605	28	NZ_CP013110	Sinorhizobium americanum strain CFNEI 73 plasmid C, complete sequence	1510296-1510323	7	0.75
NZ_CP012159_42	42.2\|9724578\|28\|NZ_CP012159\|CRT	9724578-9724605	28	NZ_CP016451	Sinorhizobium sp. RAC02 plasmid pBSY16_2, complete sequence	110495-110522	7	0.75
NZ_CP012159_42	42.3\|9724626\|28\|NZ_CP012159\|CRT	9724626-9724653	28	NZ_CP032322	Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence	1797942-1797969	7	0.75
NZ_CP012159_42	42.3\|9724626\|28\|NZ_CP012159\|CRT	9724626-9724653	28	NZ_CP013110	Sinorhizobium americanum strain CFNEI 73 plasmid C, complete sequence	1510296-1510323	7	0.75
NZ_CP012159_42	42.3\|9724626\|28\|NZ_CP012159\|CRT	9724626-9724653	28	NZ_CP016451	Sinorhizobium sp. RAC02 plasmid pBSY16_2, complete sequence	110495-110522	7	0.75
NZ_CP012159_42	42.4\|9724674\|28\|NZ_CP012159\|CRT	9724674-9724701	28	NZ_CP048110	Klebsiella michiganensis strain BD177 plasmid unnamed2	182047-182074	7	0.75
NZ_CP012159_42	42.4\|9724674\|28\|NZ_CP012159\|CRT	9724674-9724701	28	NZ_CP007734	Klebsiella pneumoniae subsp. pneumoniae KPNIH27 plasmid pKPN-262, complete sequence	160116-160143	7	0.75
NZ_CP012159_42	42.4\|9724674\|28\|NZ_CP012159\|CRT	9724674-9724701	28	NZ_CP020911	Rhizobium etli strain NXC12 plasmid pRetNXC12e, complete sequence	899800-899827	7	0.75
NZ_CP012159_42	42.4\|9724674\|28\|NZ_CP012159\|CRT	9724674-9724701	28	NZ_CP029833	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed3, complete sequence	309787-309814	7	0.75
NZ_CP012159_29	29.39\|7098399\|37\|NZ_CP012159\|CRISPRCasFinder,CRT	7098399-7098435	37	NC_010553	Burkholderia ambifaria MC40-6 plasmid pBMC401, complete sequence	265989-266025	8	0.784
NZ_CP012159_29	29.39\|7098399\|37\|NZ_CP012159\|CRISPRCasFinder,CRT	7098399-7098435	37	NC_010553	Burkholderia ambifaria MC40-6 plasmid pBMC401, complete sequence	279960-279996	8	0.784
NZ_CP012159_29	29.89\|7098400\|37\|NZ_CP012159\|PILER-CR	7098400-7098436	37	NC_010553	Burkholderia ambifaria MC40-6 plasmid pBMC401, complete sequence	265989-266025	8	0.784
NZ_CP012159_29	29.89\|7098400\|37\|NZ_CP012159\|PILER-CR	7098400-7098436	37	NC_010553	Burkholderia ambifaria MC40-6 plasmid pBMC401, complete sequence	279960-279996	8	0.784
NZ_CP012159_30	30.3\|7109384\|31\|NZ_CP012159\|CRISPRCasFinder	7109384-7109414	31	CP000662	Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01, complete sequence	601175-601205	8	0.742
NZ_CP012159_30	30.3\|7109384\|31\|NZ_CP012159\|CRISPRCasFinder	7109384-7109414	31	CP000666	Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA05, complete sequence	6817-6847	8	0.742
NZ_CP012159_30	30.3\|7109384\|31\|NZ_CP012159\|CRISPRCasFinder	7109384-7109414	31	NZ_CP031752	Rhodobacter sphaeroides strain EBL0706 plasmid p.A, complete sequence	106924-106954	8	0.742
NZ_CP012159_30	30.16\|7110295\|35\|NZ_CP012159\|CRISPRCasFinder,CRT,PILER-CR	7110295-7110329	35	NZ_CP021083	Deinococcus ficus strain CC-FR2-10 plasmid pDFI2, complete sequence	201456-201490	8	0.771
NZ_CP012159_30	30.29\|7111230\|34\|NZ_CP012159\|CRISPRCasFinder,CRT,PILER-CR	7111230-7111263	34	NZ_CP054613	Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence	1090197-1090230	8	0.765
NZ_CP012159_30	30.53\|7112966\|34\|NZ_CP012159\|CRISPRCasFinder,CRT,PILER-CR	7112966-7112999	34	NZ_CP020399	Burkholderia multivorans strain FDAARGOS_246 plasmid unnamed, complete sequence	110523-110556	8	0.765
NZ_CP012159_30	30.67\|7113967\|34\|NZ_CP012159\|CRISPRCasFinder,CRT,PILER-CR	7113967-7114000	34	NZ_CP023549	Rhodobacter sp. CZR27 plasmid unnamed1, complete sequence	531552-531585	8	0.765
NZ_CP012159_42	42.2\|9724578\|28\|NZ_CP012159\|CRT	9724578-9724605	28	NZ_CP043441	Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence	2373793-2373820	8	0.714
NZ_CP012159_42	42.3\|9724626\|28\|NZ_CP012159\|CRT	9724626-9724653	28	NZ_CP043441	Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence	2373793-2373820	8	0.714
NZ_CP012159_15	15.7\|3520688\|35\|NZ_CP012159\|PILER-CR,CRISPRCasFinder,CRT	3520688-3520722	35	NZ_CP031166	Euzebya sp. DY32-46 plasmid pEDY32-46I, complete sequence	418427-418461	9	0.743
NZ_CP012159_17	17.10\|4524714\|37\|NZ_CP012159\|PILER-CR,CRISPRCasFinder,CRT	4524714-4524750	37	NZ_CP029357	Azospirillum sp. CFH 70021 plasmid unnamed2	637017-637053	9	0.757
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	MT553346	Mycobacterium phage Scamp, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	MH536817	Mycobacterium phage Druantia, complete genome	8541-8575	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	MF919496	Mycobacterium phage Cerulean, complete genome	8518-8552	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	JX307703	Mycobacterium phage Sabertooth, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	JQ896627	Mycobacterium phage ICleared, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	MH020249	Mycobacterium phage Skipitt, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	MH697588	Mycobacterium phage Jaykayelowell, complete genome	8539-8573	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	MH479911	Mycobacterium phage Eapen, complete genome	8542-8576	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	KF024733	Mycobacterium phage Medusa, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	MF919509	Mycobacterium phage JetBlade, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	KY204251	Mycobacterium phage Thanksgivukkah, complete genome	8545-8579	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	JF792674	Mycobacterium phage Shaka, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	KY204245	Mycobacterium phage Camperdownii, complete genome	8157-8191	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	MK494088	Mycobacterium phage Mazhar510, complete genome	8541-8575	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	MK494094	Mycobacterium phage DirtyDunning, complete genome	8536-8570	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	MK359340	Mycobacterium phage Phontbonne, complete genome	8484-8518	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	MG944217	Mycobacterium phage Phacado, complete genome	8539-8573	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	MH155875	Mycobacterium phage Pipcraft, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	MT490373	Mycobacterium phage OKaNui, complete genome	8305-8339	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	MK494101	Mycobacterium phage Connomayer, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	MH825710	Mycobacterium phage Ruin, complete genome	8539-8573	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	KT716493	Mycobacterium phage Caelakin, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	MG944224	Mycobacterium phage Wander, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	MK359301	Mycobacterium phage Kingmustik0402, complete genome	8532-8566	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	MK494126	Mycobacterium phage PeterPeter, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	KY083058	Mycobacterium phage Abdiel, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	MT889390	Mycobacterium phage Bartimeaus, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	KX808130	Mycobacterium phage Broseidon, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	MK494097	Mycobacterium phage Lorenzo, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	KY204250	Mycobacterium phage Kratark, complete genome	8535-8569	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	MK359323	Mycobacterium phage Baby16, complete genome	8549-8583	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	KY083060	Mycobacterium phage Bruiser, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	KX557234	Mycobacterium phage Florean, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	KT365397	Mycobacterium phage Maverick, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	JN243856	Mycobacterium phage MeeZee, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	MK494125	Mycobacterium phage Kyee, complete genome	8541-8575	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	MH509443	Mycobacterium phage Avle17, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	KC661271	Mycobacterium phage Dhanush, complete genome	8543-8577	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	MH155879	Mycobacterium phage Relief, complete genome	8541-8575	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	MK359310	Mycobacterium phage Katalie136, complete genome	8549-8583	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	MK279898	Mycobacterium phage Cici, complete genome	8537-8571	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	MK310145	Mycobacterium phage Lemur, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	KY204247	Mycobacterium phage Funston, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	MH230877	Mycobacterium phage NorthStar, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	MK359356	Mycobacterium phage Nebs, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	HM152766	Mycobacterium phage Eagle, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	MH479909	Mycobacterium phage Commander, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	MG099942	Mycobacterium phage Blackmoor, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	MT889386	Mycobacterium phage CentreCat, complete genome	8541-8575	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	KX619651	Mycobacterium phage Roosevelt, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	MK494093	Mycobacterium phage Phighter1804, complete genome	8516-8550	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	KY549155	Mycobacterium phage Tinybot, complete genome	8520-8554	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	KF841476	Mycobacterium phage Melvin, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	KY083062	Mycobacterium phage Millski, complete genome	8543-8577	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	MF919498	Mycobacterium phage Cindaradix, complete genome	8246-8280	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	KX648373	Mycobacterium phage Cocoaberry, complete genome	8544-8578	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	NC_023562	Mycobacterium phage BellusTerra, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	MK279902	Mycobacterium phage Citius, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	KP027198	Mycobacterium phage Gadost, complete genome	8544-8578	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	MN728684	Mycobacterium phage Ohfah, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	MK878905	Mycobacterium phage TygerBlood, complete genome	8542-8576	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	MK359325	Mycobacterium phage Eros, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	NC_024141	Mycobacterium phage Kampy, complete genome	8541-8575	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	NC_028687	Mycobacterium phage Iracema64, complete genome	8517-8551	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	MT889382	Mycobacterium phage TroyPia, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	KY471266	Mycobacterium phage TinaFeyge, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	JN561150	Mycobacterium phage TiroTheta9, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	KX458236	Mycobacterium phage Wilbur, complete genome	8539-8573	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	MT498056	Mycobacterium phage Chaph, complete genome	8549-8583	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	NC_013694	Mycobacterium virus Peaches, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	JN699015	Mycobacterium virus LHTSCC, complete genome	8517-8551	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	KY204246	Mycobacterium phage Clarenza, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	KY083063	Mycobacterium phage Eris, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	MK494115	Mycobacterium phage Bumblebee11, complete genome	8549-8583	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	MT114158	Mycobacterium phage Polymorphads, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	MH727563	Mycobacterium phage Wizard007, complete genome	8542-8576	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	KY204249	Mycobacterium phage KFPoly, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	MH651170	Mycobacterium phage ChampagnePapi, complete genome	8517-8551	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	MT818417	Mycobacterium phage Maxo, complete genome	8541-8575	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	KY083061	Mycobacterium phage Palestino, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	KU867906	Mycobacterium phage Romney, complete genome	8539-8573	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	KY204244	Mycobacterium phage BubbleTrouble, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	NC_023577	Mycobacterium phage Obama12, complete genome	8519-8553	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	MK878895	Mycobacterium phage SheldonCooper, complete genome	8518-8552	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	MT723939	Mycobacterium phage Bombshell, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	MH051247	Mycobacterium phage Annyong, complete genome	8541-8575	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	MG962373	Mycobacterium phage Morrow, complete genome	8543-8577	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	KF954506	Mycobacterium phage Nyxis, complete genome	8486-8520	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	MH399777	Mycobacterium phage Houdini22, complete genome	8544-8578	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	KX817174	Mycobacterium phage LittleB, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	KX550441	Mycobacterium phage LittleGuy, complete genome	8483-8517	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	KU985092	Mycobacterium phage Holli, complete genome	8333-8367	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	KP057620	Mycobacterium phage HamSlice, complete genome	8541-8575	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	KX579975	Mycobacterium phage Mundrea, complete genome	8502-8536	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	MF668278	Mycobacterium phage Morpher26, complete genome	8549-8583	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	MH399785	Mycobacterium phage NotAPhaseMom, complete genome	8544-8578	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	KU985094	Mycobacterium phage Burger, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	KY006473	Mycobacterium phage LeoAvram, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	NC_042339	Mycobacterium virus Arturo, complete genome	8651-8685	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	MT553338	Mycobacterium phage Deano, complete genome	8546-8580	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	KX817175	Mycobacterium phage Albee, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	KY204248	Mycobacterium phage JoongJeon, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	JQ809701	Mycobacterium phage Flux, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.11\|7096397\|35\|NZ_CP012159\|CRISPRCasFinder,CRT	7096397-7096431	35	MH077581	Mycobacterium phage Nemo27, complete genome	8539-8573	9	0.743
NZ_CP012159_29	29.27\|7097535\|34\|NZ_CP012159\|CRISPRCasFinder,CRT	7097535-7097568	34	NZ_CP048048	Clavibacter michiganensis subsp. capsici strain 1106 plasmid pCM2_1106, complete sequence	89133-89166	9	0.735
NZ_CP012159_29	29.27\|7097535\|34\|NZ_CP012159\|CRISPRCasFinder,CRT	7097535-7097568	34	NZ_CP012575	Clavibacter michiganensis subsp. capsici strain PF008 plasmid pCM2, complete sequence	71299-71332	9	0.735
NZ_CP012159_29	29.27\|7097535\|34\|NZ_CP012159\|CRISPRCasFinder,CRT	7097535-7097568	34	CP048046	Clavibacter michiganensis subsp. capsici strain 1207 plasmid pCM2_1207, complete sequence	70817-70850	9	0.735
NZ_CP012159_29	29.27\|7097535\|34\|NZ_CP012159\|CRISPRCasFinder,CRT	7097535-7097568	34	NZ_CP048050	Clavibacter michiganensis subsp. capsici strain 1101 plasmid pCM2_1101, complete sequence	15395-15428	9	0.735
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	MT553346	Mycobacterium phage Scamp, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	MH536817	Mycobacterium phage Druantia, complete genome	8541-8575	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	MF919496	Mycobacterium phage Cerulean, complete genome	8518-8552	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	JX307703	Mycobacterium phage Sabertooth, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	JQ896627	Mycobacterium phage ICleared, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	MH020249	Mycobacterium phage Skipitt, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	MH697588	Mycobacterium phage Jaykayelowell, complete genome	8539-8573	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	MH479911	Mycobacterium phage Eapen, complete genome	8542-8576	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	KF024733	Mycobacterium phage Medusa, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	MF919509	Mycobacterium phage JetBlade, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	KY204251	Mycobacterium phage Thanksgivukkah, complete genome	8545-8579	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	JF792674	Mycobacterium phage Shaka, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	KY204245	Mycobacterium phage Camperdownii, complete genome	8157-8191	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	MK494088	Mycobacterium phage Mazhar510, complete genome	8541-8575	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	MK494094	Mycobacterium phage DirtyDunning, complete genome	8536-8570	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	MK359340	Mycobacterium phage Phontbonne, complete genome	8484-8518	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	MG944217	Mycobacterium phage Phacado, complete genome	8539-8573	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	MH155875	Mycobacterium phage Pipcraft, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	MT490373	Mycobacterium phage OKaNui, complete genome	8305-8339	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	MK494101	Mycobacterium phage Connomayer, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	MH825710	Mycobacterium phage Ruin, complete genome	8539-8573	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	KT716493	Mycobacterium phage Caelakin, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	MG944224	Mycobacterium phage Wander, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	MK359301	Mycobacterium phage Kingmustik0402, complete genome	8532-8566	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	MK494126	Mycobacterium phage PeterPeter, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	KY083058	Mycobacterium phage Abdiel, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	MT889390	Mycobacterium phage Bartimeaus, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	KX808130	Mycobacterium phage Broseidon, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	MK494097	Mycobacterium phage Lorenzo, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	KY204250	Mycobacterium phage Kratark, complete genome	8535-8569	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	MK359323	Mycobacterium phage Baby16, complete genome	8549-8583	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	KY083060	Mycobacterium phage Bruiser, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	KX557234	Mycobacterium phage Florean, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	KT365397	Mycobacterium phage Maverick, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	JN243856	Mycobacterium phage MeeZee, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	MK494125	Mycobacterium phage Kyee, complete genome	8541-8575	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	MH509443	Mycobacterium phage Avle17, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	KC661271	Mycobacterium phage Dhanush, complete genome	8543-8577	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	MH155879	Mycobacterium phage Relief, complete genome	8541-8575	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	MK359310	Mycobacterium phage Katalie136, complete genome	8549-8583	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	MK279898	Mycobacterium phage Cici, complete genome	8537-8571	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	MK310145	Mycobacterium phage Lemur, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	KY204247	Mycobacterium phage Funston, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	MH230877	Mycobacterium phage NorthStar, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	MK359356	Mycobacterium phage Nebs, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	HM152766	Mycobacterium phage Eagle, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	MH479909	Mycobacterium phage Commander, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	MG099942	Mycobacterium phage Blackmoor, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	MT889386	Mycobacterium phage CentreCat, complete genome	8541-8575	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	KX619651	Mycobacterium phage Roosevelt, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	MK494093	Mycobacterium phage Phighter1804, complete genome	8516-8550	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	KY549155	Mycobacterium phage Tinybot, complete genome	8520-8554	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	KF841476	Mycobacterium phage Melvin, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	KY083062	Mycobacterium phage Millski, complete genome	8543-8577	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	MF919498	Mycobacterium phage Cindaradix, complete genome	8246-8280	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	KX648373	Mycobacterium phage Cocoaberry, complete genome	8544-8578	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	NC_023562	Mycobacterium phage BellusTerra, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	MK279902	Mycobacterium phage Citius, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	KP027198	Mycobacterium phage Gadost, complete genome	8544-8578	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	MN728684	Mycobacterium phage Ohfah, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	MK878905	Mycobacterium phage TygerBlood, complete genome	8542-8576	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	MK359325	Mycobacterium phage Eros, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	NC_024141	Mycobacterium phage Kampy, complete genome	8541-8575	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	NC_028687	Mycobacterium phage Iracema64, complete genome	8517-8551	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	MT889382	Mycobacterium phage TroyPia, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	KY471266	Mycobacterium phage TinaFeyge, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	JN561150	Mycobacterium phage TiroTheta9, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	KX458236	Mycobacterium phage Wilbur, complete genome	8539-8573	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	MT498056	Mycobacterium phage Chaph, complete genome	8549-8583	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	NC_013694	Mycobacterium virus Peaches, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	JN699015	Mycobacterium virus LHTSCC, complete genome	8517-8551	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	KY204246	Mycobacterium phage Clarenza, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	KY083063	Mycobacterium phage Eris, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	MK494115	Mycobacterium phage Bumblebee11, complete genome	8549-8583	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	MT114158	Mycobacterium phage Polymorphads, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	MH727563	Mycobacterium phage Wizard007, complete genome	8542-8576	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	KY204249	Mycobacterium phage KFPoly, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	MH651170	Mycobacterium phage ChampagnePapi, complete genome	8517-8551	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	MT818417	Mycobacterium phage Maxo, complete genome	8541-8575	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	KY083061	Mycobacterium phage Palestino, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	KU867906	Mycobacterium phage Romney, complete genome	8539-8573	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	KY204244	Mycobacterium phage BubbleTrouble, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	NC_023577	Mycobacterium phage Obama12, complete genome	8519-8553	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	MK878895	Mycobacterium phage SheldonCooper, complete genome	8518-8552	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	MT723939	Mycobacterium phage Bombshell, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	MH051247	Mycobacterium phage Annyong, complete genome	8541-8575	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	MG962373	Mycobacterium phage Morrow, complete genome	8543-8577	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	KF954506	Mycobacterium phage Nyxis, complete genome	8486-8520	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	MH399777	Mycobacterium phage Houdini22, complete genome	8544-8578	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	KX817174	Mycobacterium phage LittleB, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	KX550441	Mycobacterium phage LittleGuy, complete genome	8483-8517	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	KU985092	Mycobacterium phage Holli, complete genome	8333-8367	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	KP057620	Mycobacterium phage HamSlice, complete genome	8541-8575	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	KX579975	Mycobacterium phage Mundrea, complete genome	8502-8536	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	MF668278	Mycobacterium phage Morpher26, complete genome	8549-8583	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	MH399785	Mycobacterium phage NotAPhaseMom, complete genome	8544-8578	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	KU985094	Mycobacterium phage Burger, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	KY006473	Mycobacterium phage LeoAvram, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	NC_042339	Mycobacterium virus Arturo, complete genome	8651-8685	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	MT553338	Mycobacterium phage Deano, complete genome	8546-8580	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	KX817175	Mycobacterium phage Albee, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	KY204248	Mycobacterium phage JoongJeon, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	JQ809701	Mycobacterium phage Flux, complete genome	8540-8574	9	0.743
NZ_CP012159_29	29.61\|7096398\|35\|NZ_CP012159\|PILER-CR	7096398-7096432	35	MH077581	Mycobacterium phage Nemo27, complete genome	8539-8573	9	0.743
NZ_CP012159_29	29.77\|7097536\|34\|NZ_CP012159\|PILER-CR	7097536-7097569	34	NZ_CP048048	Clavibacter michiganensis subsp. capsici strain 1106 plasmid pCM2_1106, complete sequence	89133-89166	9	0.735
NZ_CP012159_29	29.77\|7097536\|34\|NZ_CP012159\|PILER-CR	7097536-7097569	34	NZ_CP012575	Clavibacter michiganensis subsp. capsici strain PF008 plasmid pCM2, complete sequence	71299-71332	9	0.735
NZ_CP012159_29	29.77\|7097536\|34\|NZ_CP012159\|PILER-CR	7097536-7097569	34	CP048046	Clavibacter michiganensis subsp. capsici strain 1207 plasmid pCM2_1207, complete sequence	70817-70850	9	0.735
NZ_CP012159_29	29.77\|7097536\|34\|NZ_CP012159\|PILER-CR	7097536-7097569	34	NZ_CP048050	Clavibacter michiganensis subsp. capsici strain 1101 plasmid pCM2_1101, complete sequence	15395-15428	9	0.735
NZ_CP012159_30	30.3\|7109384\|31\|NZ_CP012159\|CRISPRCasFinder	7109384-7109414	31	NZ_CP013104	Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence	1871402-1871432	9	0.71
NZ_CP012159_30	30.3\|7109384\|31\|NZ_CP012159\|CRISPRCasFinder	7109384-7109414	31	NZ_CP012748	Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence	155731-155761	9	0.71
NZ_CP012159_30	30.22\|7110723\|37\|NZ_CP012159\|CRISPRCasFinder,CRT,PILER-CR	7110723-7110759	37	NC_021056	Streptomyces sp. PAMC 26508 plasmid pSP01, complete sequence	15346-15382	9	0.757
NZ_CP012159_30	30.44\|7112316\|34\|NZ_CP012159\|CRISPRCasFinder,CRT,PILER-CR	7112316-7112349	34	NC_023498	Mycobacterium phage Validus, complete genome	55502-55535	9	0.735
NZ_CP012159_30	30.75\|7109524\|33\|NZ_CP012159\|PILER-CR	7109524-7109556	33	NC_007765	Rhizobium etli CFN 42 plasmid p42e, complete sequence	195856-195888	9	0.727
NZ_CP012159_30	30.75\|7109524\|33\|NZ_CP012159\|PILER-CR	7109524-7109556	33	NZ_CP020909	Rhizobium etli strain NXC12 plasmid pRetNXC12c, complete sequence	196329-196361	9	0.727
NZ_CP012159_30	30.75\|7109524\|33\|NZ_CP012159\|PILER-CR	7109524-7109556	33	NC_021908	Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1d, complete sequence	195361-195393	9	0.727
NZ_CP012159_31	31.1\|7334061\|31\|NZ_CP012159\|CRISPRCasFinder	7334061-7334091	31	NZ_AP018440	Undibacterium sp. KW1 plasmid pUKW01, complete sequence	15386-15416	9	0.71
NZ_CP012159_35	35.2\|7819876\|34\|NZ_CP012159\|PILER-CR,CRISPRCasFinder,CRT	7819876-7819909	34	NZ_CP032347	Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence	616042-616075	9	0.735
NZ_CP012159_35	35.3\|7819947\|35\|NZ_CP012159\|PILER-CR,CRISPRCasFinder,CRT	7819947-7819981	35	NZ_CP017303	Rhodococcus sp. YL-1 plasmid pYLL1 sequence	281093-281127	9	0.743
NZ_CP012159_39	39.1\|9159483\|34\|NZ_CP012159\|CRISPRCasFinder	9159483-9159516	34	NZ_CP012886	Mycobacterium chimaera strain AH16 plasmid unnamed1, complete sequence	268651-268684	9	0.735
NZ_CP012159_29	29.27\|7097535\|34\|NZ_CP012159\|CRISPRCasFinder,CRT	7097535-7097568	34	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	5860786-5860819	10	0.706
NZ_CP012159_29	29.27\|7097535\|34\|NZ_CP012159\|CRISPRCasFinder,CRT	7097535-7097568	34	NZ_CP030864	Streptomyces globosus strain LZH-48 plasmid unnamed2, complete sequence	515839-515872	10	0.706
NZ_CP012159_29	29.32\|7097896\|37\|NZ_CP012159\|CRISPRCasFinder,CRT	7097896-7097932	37	NZ_CP022775	Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence	1281547-1281583	10	0.73
NZ_CP012159_29	29.32\|7097896\|37\|NZ_CP012159\|CRISPRCasFinder,CRT	7097896-7097932	37	NC_014310	Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence	1336064-1336100	10	0.73
NZ_CP012159_29	29.32\|7097896\|37\|NZ_CP012159\|CRISPRCasFinder,CRT	7097896-7097932	37	NZ_CP022762	Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence	1206502-1206538	10	0.73
NZ_CP012159_29	29.32\|7097896\|37\|NZ_CP012159\|CRISPRCasFinder,CRT	7097896-7097932	37	NZ_CP023017	Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence	1266205-1266241	10	0.73
NZ_CP012159_29	29.32\|7097896\|37\|NZ_CP012159\|CRISPRCasFinder,CRT	7097896-7097932	37	NZ_CP014703	Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence	1205599-1205635	10	0.73
NZ_CP012159_29	29.32\|7097896\|37\|NZ_CP012159\|CRISPRCasFinder,CRT	7097896-7097932	37	NZ_CP022760	Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence	1238528-1238564	10	0.73
NZ_CP012159_29	29.32\|7097896\|37\|NZ_CP012159\|CRISPRCasFinder,CRT	7097896-7097932	37	NZ_CP022789	Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence	1238519-1238555	10	0.73
NZ_CP012159_29	29.32\|7097896\|37\|NZ_CP012159\|CRISPRCasFinder,CRT	7097896-7097932	37	NZ_CP022771	Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence	1206494-1206530	10	0.73
NZ_CP012159_29	29.32\|7097896\|37\|NZ_CP012159\|CRISPRCasFinder,CRT	7097896-7097932	37	NZ_CP022777	Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence	1205850-1205886	10	0.73
NZ_CP012159_29	29.32\|7097896\|37\|NZ_CP012159\|CRISPRCasFinder,CRT	7097896-7097932	37	NZ_CP022799	Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence	1206485-1206521	10	0.73
NZ_CP012159_29	29.32\|7097896\|37\|NZ_CP012159\|CRISPRCasFinder,CRT	7097896-7097932	37	NZ_CP022764	Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence	1281669-1281705	10	0.73
NZ_CP012159_29	29.32\|7097896\|37\|NZ_CP012159\|CRISPRCasFinder,CRT	7097896-7097932	37	NZ_CP022797	Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence	1281652-1281688	10	0.73
NZ_CP012159_29	29.32\|7097896\|37\|NZ_CP012159\|CRISPRCasFinder,CRT	7097896-7097932	37	NZ_CP022758	Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence	1281644-1281680	10	0.73
NZ_CP012159_29	29.77\|7097536\|34\|NZ_CP012159\|PILER-CR	7097536-7097569	34	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	5860786-5860819	10	0.706
NZ_CP012159_29	29.77\|7097536\|34\|NZ_CP012159\|PILER-CR	7097536-7097569	34	NZ_CP030864	Streptomyces globosus strain LZH-48 plasmid unnamed2, complete sequence	515839-515872	10	0.706
NZ_CP012159_29	29.82\|7097897\|37\|NZ_CP012159\|PILER-CR	7097897-7097933	37	NZ_CP022775	Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence	1281547-1281583	10	0.73
NZ_CP012159_29	29.82\|7097897\|37\|NZ_CP012159\|PILER-CR	7097897-7097933	37	NC_014310	Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence	1336064-1336100	10	0.73
NZ_CP012159_29	29.82\|7097897\|37\|NZ_CP012159\|PILER-CR	7097897-7097933	37	NZ_CP022762	Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence	1206502-1206538	10	0.73
NZ_CP012159_29	29.82\|7097897\|37\|NZ_CP012159\|PILER-CR	7097897-7097933	37	NZ_CP023017	Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence	1266205-1266241	10	0.73
NZ_CP012159_29	29.82\|7097897\|37\|NZ_CP012159\|PILER-CR	7097897-7097933	37	NZ_CP014703	Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence	1205599-1205635	10	0.73
NZ_CP012159_29	29.82\|7097897\|37\|NZ_CP012159\|PILER-CR	7097897-7097933	37	NZ_CP022760	Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence	1238528-1238564	10	0.73
NZ_CP012159_29	29.82\|7097897\|37\|NZ_CP012159\|PILER-CR	7097897-7097933	37	NZ_CP022789	Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence	1238519-1238555	10	0.73
NZ_CP012159_29	29.82\|7097897\|37\|NZ_CP012159\|PILER-CR	7097897-7097933	37	NZ_CP022771	Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence	1206494-1206530	10	0.73
NZ_CP012159_29	29.82\|7097897\|37\|NZ_CP012159\|PILER-CR	7097897-7097933	37	NZ_CP022777	Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence	1205850-1205886	10	0.73
NZ_CP012159_29	29.82\|7097897\|37\|NZ_CP012159\|PILER-CR	7097897-7097933	37	NZ_CP022799	Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence	1206485-1206521	10	0.73
NZ_CP012159_29	29.82\|7097897\|37\|NZ_CP012159\|PILER-CR	7097897-7097933	37	NZ_CP022764	Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence	1281669-1281705	10	0.73
NZ_CP012159_29	29.82\|7097897\|37\|NZ_CP012159\|PILER-CR	7097897-7097933	37	NZ_CP022797	Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence	1281652-1281688	10	0.73
NZ_CP012159_29	29.82\|7097897\|37\|NZ_CP012159\|PILER-CR	7097897-7097933	37	NZ_CP022758	Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence	1281644-1281680	10	0.73
NZ_CP012159_30	30.51\|7112821\|37\|NZ_CP012159\|CRISPRCasFinder,CRT,PILER-CR	7112821-7112857	37	MH617365	Microviridae sp. isolate ctbe193, complete genome	1558-1594	10	0.73
NZ_CP012159_30	30.75\|7109524\|33\|NZ_CP012159\|PILER-CR	7109524-7109556	33	NZ_CP017943	Phyllobacterium zundukense strain Tri-48 plasmid unnamed2, complete sequence	488986-489018	10	0.697
NZ_CP012159_30	30.75\|7109524\|33\|NZ_CP012159\|PILER-CR	7109524-7109556	33	NZ_CP038638	Cupriavidus oxalaticus strain X32 plasmid unnamed3, complete sequence	32277-32309	10	0.697
NZ_CP012159_35	35.3\|7819947\|35\|NZ_CP012159\|PILER-CR,CRISPRCasFinder,CRT	7819947-7819981	35	NZ_CP022775	Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence	1972642-1972676	10	0.714
NZ_CP012159_35	35.3\|7819947\|35\|NZ_CP012159\|PILER-CR,CRISPRCasFinder,CRT	7819947-7819981	35	NZ_CP022762	Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence	1868689-1868723	10	0.714
NZ_CP012159_35	35.3\|7819947\|35\|NZ_CP012159\|PILER-CR,CRISPRCasFinder,CRT	7819947-7819981	35	NZ_CP023017	Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence	2019191-2019225	10	0.714
NZ_CP012159_35	35.3\|7819947\|35\|NZ_CP012159\|PILER-CR,CRISPRCasFinder,CRT	7819947-7819981	35	NZ_CP014703	Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence	1867709-1867743	10	0.714
NZ_CP012159_35	35.3\|7819947\|35\|NZ_CP012159\|PILER-CR,CRISPRCasFinder,CRT	7819947-7819981	35	NZ_CP022771	Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence	1868033-1868067	10	0.714
NZ_CP012159_35	35.3\|7819947\|35\|NZ_CP012159\|PILER-CR,CRISPRCasFinder,CRT	7819947-7819981	35	NZ_CP022777	Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence	1868082-1868116	10	0.714
NZ_CP012159_35	35.3\|7819947\|35\|NZ_CP012159\|PILER-CR,CRISPRCasFinder,CRT	7819947-7819981	35	NZ_CP022799	Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence	1868669-1868703	10	0.714
NZ_CP012159_35	35.3\|7819947\|35\|NZ_CP012159\|PILER-CR,CRISPRCasFinder,CRT	7819947-7819981	35	NZ_CP022764	Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence	1972833-1972867	10	0.714
NZ_CP012159_35	35.3\|7819947\|35\|NZ_CP012159\|PILER-CR,CRISPRCasFinder,CRT	7819947-7819981	35	NZ_CP022797	Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence	1972831-1972865	10	0.714
NZ_CP012159_35	35.3\|7819947\|35\|NZ_CP012159\|PILER-CR,CRISPRCasFinder,CRT	7819947-7819981	35	NZ_CP022758	Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence	1972795-1972829	10	0.714
NZ_CP012159_35	35.4\|7820019\|34\|NZ_CP012159\|PILER-CR,CRISPRCasFinder,CRT	7820019-7820052	34	NZ_CP039965	Pseudorhodobacter sp. S12M18 plasmid unnamed1, complete sequence	206143-206176	10	0.706
NZ_CP012159_36	36.1\|7912333\|36\|NZ_CP012159\|CRISPRCasFinder	7912333-7912368	36	NZ_CP020716	Cnuibacter physcomitrellae strain XA(T) plasmid unnamed1, complete sequence	35879-35914	10	0.722
NZ_CP012159_17	17.1\|4524046\|35\|NZ_CP012159\|PILER-CR,CRISPRCasFinder,CRT	4524046-4524080	35	NC_009426	Novosphingobium aromaticivorans DSM 12444 plasmid pNL1, complete sequence	130577-130611	11	0.686
NZ_CP012159_17	17.1\|4524046\|35\|NZ_CP012159\|PILER-CR,CRISPRCasFinder,CRT	4524046-4524080	35	NC_002033	Novosphingobium aromaticivorans plasmid pNL1, complete sequence	73969-74003	11	0.686
NZ_CP012159_29	29.16\|7096753\|37\|NZ_CP012159\|CRISPRCasFinder,CRT	7096753-7096789	37	NZ_CP026091	Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence	808417-808453	11	0.703
NZ_CP012159_29	29.16\|7096753\|37\|NZ_CP012159\|CRISPRCasFinder,CRT	7096753-7096789	37	NC_014309	Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome	1703193-1703229	11	0.703
NZ_CP012159_29	29.16\|7096753\|37\|NZ_CP012159\|CRISPRCasFinder,CRT	7096753-7096789	37	NZ_CP021653	Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence	1621258-1621294	11	0.703
NZ_CP012159_29	29.16\|7096753\|37\|NZ_CP012159\|CRISPRCasFinder,CRT	7096753-7096789	37	NZ_CP026093	Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence	808522-808558	11	0.703
NZ_CP012159_29	29.16\|7096753\|37\|NZ_CP012159\|CRISPRCasFinder,CRT	7096753-7096789	37	NZ_CP021767	Ralstonia solanacearum strain RS 489 plasmid unnamed, complete sequence	1621272-1621308	11	0.703
NZ_CP012159_29	29.16\|7096753\|37\|NZ_CP012159\|CRISPRCasFinder,CRT	7096753-7096789	37	NZ_CP012940	Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence	1380038-1380074	11	0.703
NZ_CP012159_29	29.16\|7096753\|37\|NZ_CP012159\|CRISPRCasFinder,CRT	7096753-7096789	37	NZ_CP012944	Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence	464187-464223	11	0.703
NZ_CP012159_29	29.16\|7096753\|37\|NZ_CP012159\|CRISPRCasFinder,CRT	7096753-7096789	37	NZ_CP012688	Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence	1621256-1621292	11	0.703
NZ_CP012159_29	29.16\|7096753\|37\|NZ_CP012159\|CRISPRCasFinder,CRT	7096753-7096789	37	NC_017575	Ralstonia solanacearum Po82 megaplasmid, complete sequence	808264-808300	11	0.703
NZ_CP012159_29	29.16\|7096753\|37\|NZ_CP012159\|CRISPRCasFinder,CRT	7096753-7096789	37	NZ_CP026308	Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence	808242-808278	11	0.703
NZ_CP012159_29	29.16\|7096753\|37\|NZ_CP012159\|CRISPRCasFinder,CRT	7096753-7096789	37	CP047139	Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence	1527265-1527301	11	0.703
NZ_CP012159_29	29.16\|7096753\|37\|NZ_CP012159\|CRISPRCasFinder,CRT	7096753-7096789	37	NZ_CP051295	Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence	1365608-1365644	11	0.703
NZ_CP012159_29	29.16\|7096753\|37\|NZ_CP012159\|CRISPRCasFinder,CRT	7096753-7096789	37	CP047137	Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence	1470467-1470503	11	0.703
NZ_CP012159_29	29.27\|7097535\|34\|NZ_CP012159\|CRISPRCasFinder,CRT	7097535-7097568	34	NC_013449	Streptomyces sp. W9 plasmid pCQ3, complete sequence	31696-31729	11	0.676
NZ_CP012159_29	29.66\|7096754\|37\|NZ_CP012159\|PILER-CR	7096754-7096790	37	NZ_CP026091	Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence	808417-808453	11	0.703
NZ_CP012159_29	29.66\|7096754\|37\|NZ_CP012159\|PILER-CR	7096754-7096790	37	NC_014309	Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome	1703193-1703229	11	0.703
NZ_CP012159_29	29.66\|7096754\|37\|NZ_CP012159\|PILER-CR	7096754-7096790	37	NZ_CP021653	Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence	1621258-1621294	11	0.703
NZ_CP012159_29	29.66\|7096754\|37\|NZ_CP012159\|PILER-CR	7096754-7096790	37	NZ_CP026093	Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence	808522-808558	11	0.703
NZ_CP012159_29	29.66\|7096754\|37\|NZ_CP012159\|PILER-CR	7096754-7096790	37	NZ_CP021767	Ralstonia solanacearum strain RS 489 plasmid unnamed, complete sequence	1621272-1621308	11	0.703
NZ_CP012159_29	29.66\|7096754\|37\|NZ_CP012159\|PILER-CR	7096754-7096790	37	NZ_CP012940	Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence	1380038-1380074	11	0.703
NZ_CP012159_29	29.66\|7096754\|37\|NZ_CP012159\|PILER-CR	7096754-7096790	37	NZ_CP012944	Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence	464187-464223	11	0.703
NZ_CP012159_29	29.66\|7096754\|37\|NZ_CP012159\|PILER-CR	7096754-7096790	37	NZ_CP012688	Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence	1621256-1621292	11	0.703
NZ_CP012159_29	29.66\|7096754\|37\|NZ_CP012159\|PILER-CR	7096754-7096790	37	NC_017575	Ralstonia solanacearum Po82 megaplasmid, complete sequence	808264-808300	11	0.703
NZ_CP012159_29	29.66\|7096754\|37\|NZ_CP012159\|PILER-CR	7096754-7096790	37	NZ_CP026308	Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence	808242-808278	11	0.703
NZ_CP012159_29	29.66\|7096754\|37\|NZ_CP012159\|PILER-CR	7096754-7096790	37	CP047139	Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence	1527265-1527301	11	0.703
NZ_CP012159_29	29.66\|7096754\|37\|NZ_CP012159\|PILER-CR	7096754-7096790	37	NZ_CP051295	Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence	1365608-1365644	11	0.703
NZ_CP012159_29	29.66\|7096754\|37\|NZ_CP012159\|PILER-CR	7096754-7096790	37	CP047137	Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence	1470467-1470503	11	0.703
NZ_CP012159_29	29.77\|7097536\|34\|NZ_CP012159\|PILER-CR	7097536-7097569	34	NC_013449	Streptomyces sp. W9 plasmid pCQ3, complete sequence	31696-31729	11	0.676
NZ_CP012159_30	30.8\|7109725\|36\|NZ_CP012159\|CRISPRCasFinder,CRT	7109725-7109760	36	CP000662	Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01, complete sequence	652000-652035	11	0.694
NZ_CP012159_30	30.16\|7110295\|35\|NZ_CP012159\|CRISPRCasFinder,CRT,PILER-CR	7110295-7110329	35	NZ_CP025513	Neorhizobium sp. SOG26 plasmid unnamed2, complete sequence	456591-456625	11	0.686
NZ_CP012159_30	30.16\|7110295\|35\|NZ_CP012159\|CRISPRCasFinder,CRT,PILER-CR	7110295-7110329	35	NC_011273	Mycobacterium phage Myrna, complete genome	44911-44945	11	0.686
NZ_CP012159_39	39.1\|9159483\|34\|NZ_CP012159\|CRISPRCasFinder	9159483-9159516	34	NZ_CP050104	Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b2, complete sequence	869602-869635	11	0.676
NZ_CP012159_39	39.1\|9159483\|34\|NZ_CP012159\|CRISPRCasFinder	9159483-9159516	34	NZ_CP025507	Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvA, complete sequence	648402-648435	11	0.676
NZ_CP012159_39	39.1\|9159483\|34\|NZ_CP012159\|CRISPRCasFinder	9159483-9159516	34	NZ_CP050109	Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b2, complete sequence	869602-869635	11	0.676
NZ_CP012159_39	39.1\|9159483\|34\|NZ_CP012159\|CRISPRCasFinder	9159483-9159516	34	NZ_CP050086	Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b7, complete sequence	856567-856600	11	0.676
NZ_CP012159_35	35.1\|7819805\|34\|NZ_CP012159\|PILER-CR,CRISPRCasFinder,CRT	7819805-7819838	34	NC_014459	Mycobacterium virus CrimD, complete genome	450-483	12	0.647
NZ_CP012159_29	29.39\|7098399\|37\|NZ_CP012159\|CRISPRCasFinder,CRT	7098399-7098435	37	NZ_CP013379	Burkholderia pseudomultivorans strain SUB-INT23-BP2 plasmid pINT23, complete sequence	18346-18382	21	0.432
NZ_CP012159_29	29.39\|7098399\|37\|NZ_CP012159\|CRISPRCasFinder,CRT	7098399-7098435	37	NZ_CP023519	Burkholderia cepacia strain FDAARGOS_388 plasmid unnamed1, complete sequence	64698-64734	21	0.432
NZ_CP012159_29	29.39\|7098399\|37\|NZ_CP012159\|CRISPRCasFinder,CRT	7098399-7098435	37	NZ_CP007745	Burkholderia cepacia ATCC 25416 plasmid unnamed, complete sequence	89655-89691	21	0.432
NZ_CP012159_29	29.39\|7098399\|37\|NZ_CP012159\|CRISPRCasFinder,CRT	7098399-7098435	37	NZ_CP028965	Burkholderia sp. IDO3 plasmid p1, complete sequence	63300-63336	21	0.432
NZ_CP012159_29	29.89\|7098400\|37\|NZ_CP012159\|PILER-CR	7098400-7098436	37	NZ_CP013379	Burkholderia pseudomultivorans strain SUB-INT23-BP2 plasmid pINT23, complete sequence	18346-18382	21	0.432
NZ_CP012159_29	29.89\|7098400\|37\|NZ_CP012159\|PILER-CR	7098400-7098436	37	NZ_CP023519	Burkholderia cepacia strain FDAARGOS_388 plasmid unnamed1, complete sequence	64698-64734	21	0.432
NZ_CP012159_29	29.89\|7098400\|37\|NZ_CP012159\|PILER-CR	7098400-7098436	37	NZ_CP007745	Burkholderia cepacia ATCC 25416 plasmid unnamed, complete sequence	89655-89691	21	0.432
NZ_CP012159_29	29.89\|7098400\|37\|NZ_CP012159\|PILER-CR	7098400-7098436	37	NZ_CP028965	Burkholderia sp. IDO3 plasmid p1, complete sequence	63300-63336	21	0.432

1. spacer 44.1|11283497|19|NZ_CP012159|CRT matches to NZ_CP021071 (Mesorhizobium sp. WSM1497 plasmid pWSM1497, complete sequence) position: , mismatch: 0, identity: 1.0

gacgccgacgctcgccagc	CRISPR spacer
gacgccgacgctcgccagc	Protospacer
*******************

2. spacer 44.2|11283542|19|NZ_CP012159|CRT matches to NZ_CP033222 (Parasedimentitalea marina strain W43 plasmid pW43C, complete sequence) position: , mismatch: 0, identity: 1.0

agcgccgaaagcgcccggc	CRISPR spacer
agcgccgaaagcgcccggc	Protospacer
*******************

3. spacer 10.5|3384012|21|NZ_CP012159|CRT matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.952

gccagcaccgcgaacgtcggc	CRISPR spacer
gccagcaccgcgaaggtcggc	Protospacer
************** ******

4. spacer 18.3|4793196|22|NZ_CP012159|CRISPRCasFinder matches to NZ_CP024423 (Paracoccus yeei strain TT13 plasmid pTT13-1, complete sequence) position: , mismatch: 2, identity: 0.909

gccggaactgcccctgtccgag	CRISPR spacer
gccggaactgcccctgtcctcg	Protospacer
*******************  *

5. spacer 18.3|4793196|22|NZ_CP012159|CRISPRCasFinder matches to NZ_CP015597 (Mycobacterium sp. YC-RL4 plasmid pMYC1, complete sequence) position: , mismatch: 2, identity: 0.909

gccggaactgcccctgtccgag	CRISPR spacer
cccggaactgcccctggccgag	Protospacer
 *************** *****

6. spacer 30.6|7109593|24|NZ_CP012159|CRISPRCasFinder,CRT matches to NZ_CP009292 (Novosphingobium pentaromativorans US6-1 plasmid pLA3, complete sequence) position: , mismatch: 2, identity: 0.917

gcgggcccgatgcggaccgactgg	CRISPR spacer
gcgggcccgatgcggaccgcctcg	Protospacer
******************* ** *

7. spacer 37.3|8340447|21|NZ_CP012159|CRT matches to NZ_CP032685 (Rhizobium sp. CCGE531 plasmid pRCCGE531d, complete sequence) position: , mismatch: 2, identity: 0.905

ctgtcgaggtcgtccagatca	CRISPR spacer
gtgtcgaggtcgtccagatcg	Protospacer
 *******************.

8. spacer 37.3|8340447|21|NZ_CP012159|CRT matches to NZ_CP032690 (Rhizobium sp. CCGE532 plasmid pRCCGE532d, complete sequence) position: , mismatch: 2, identity: 0.905

ctgtcgaggtcgtccagatca	CRISPR spacer
gtgtcgaggtcgtccagatcg	Protospacer
 *******************.

9. spacer 38.6|8803406|22|NZ_CP012159|CRT matches to NZ_CP020702 (Streptomyces tsukubensis strain NRRL 18488 plasmid pSTS2, complete sequence) position: , mismatch: 2, identity: 0.909

ctggaggtgccgctcctggagg	CRISPR spacer
atggaggtgctgctcctggagg	Protospacer
 *********.***********

10. spacer 30.73|7109384|24|NZ_CP012159|CRT matches to CP000662 (Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01, complete sequence) position: , mismatch: 3, identity: 0.875

tggctcaagctccagatcgcggtg	CRISPR spacer
gggctcaagctcgagatcgcgctg	Protospacer
 *********** ******** **

11. spacer 30.73|7109384|24|NZ_CP012159|CRT matches to NZ_CP031752 (Rhodobacter sphaeroides strain EBL0706 plasmid p.A, complete sequence) position: , mismatch: 3, identity: 0.875

tggctcaagctccagatcgcggtg	CRISPR spacer
gggctcaagctcgagatcgcgctg	Protospacer
 *********** ******** **

12. spacer 30.73|7109384|24|NZ_CP012159|CRT matches to CP000666 (Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA05, complete sequence) position: , mismatch: 3, identity: 0.875

tggctcaagctccagatcgcggtg	CRISPR spacer
gggctcaagctcgagatcgcgctg	Protospacer
 *********** ******** **

13. spacer 6.1|2120910|25|NZ_CP012159|CRISPRCasFinder matches to NZ_CP049157 (Caballeronia sp. SBC1 plasmid pSBC1_1, complete sequence) position: , mismatch: 4, identity: 0.84

caatcgcgaggctcgtcatgcatgt	CRISPR spacer
gcatggcgaggctggtcatgcatgt	Protospacer
  ** ******** ***********

14. spacer 6.1|2120910|25|NZ_CP012159|CRISPRCasFinder matches to NZ_CP049317 (Caballeronia sp. SBC2 plasmid pSBC2-1, complete sequence) position: , mismatch: 4, identity: 0.84

caatcgcgaggctcgtcatgcatgt	CRISPR spacer
gcatggcgaggctggtcatgcatgt	Protospacer
  ** ******** ***********

15. spacer 30.6|7109593|24|NZ_CP012159|CRISPRCasFinder,CRT matches to MT553342 (Microbacterium phage Kelcole, complete genome) position: , mismatch: 4, identity: 0.833

gcgggcccgatgcggaccgactgg	CRISPR spacer
agcggcccgatgccgaccgactgg	Protospacer
.  ********** **********

16. spacer 30.6|7109593|24|NZ_CP012159|CRISPRCasFinder,CRT matches to NC_048068 (Microbacterium phage OneinaGillian, complete genome) position: , mismatch: 4, identity: 0.833

gcgggcccgatgcggaccgactgg	CRISPR spacer
agcggcccgatgccgaccgactgg	Protospacer
.  ********** **********

17. spacer 30.6|7109593|24|NZ_CP012159|CRISPRCasFinder,CRT matches to MT310894 (Microbacterium phage Tempo, complete genome) position: , mismatch: 4, identity: 0.833

gcgggcccgatgcggaccgactgg	CRISPR spacer
agcggcccgatgccgaccgactgg	Protospacer
.  ********** **********

18. spacer 30.73|7109384|24|NZ_CP012159|CRT matches to NZ_CP009572 (Sphingomonas taxi strain ATCC 55669 plasmid STP1, complete sequence) position: , mismatch: 4, identity: 0.833

tggctcaagctccagatcgcggtg	CRISPR spacer
tggctcaagctccagatcgcctgc	Protospacer
********************

19. spacer 42.2|9724578|28|NZ_CP012159|CRT matches to NZ_CP021653 (Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.857

ccctccgcgcacggacagcggcgcctcc	CRISPR spacer
cgcgccgcgcacggacggcggcacctcc	Protospacer
* * ************.*****.*****

20. spacer 42.2|9724578|28|NZ_CP012159|CRT matches to NZ_CP012940 (Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.857

ccctccgcgcacggacagcggcgcctcc	CRISPR spacer
cgcgccgcgcacggacggcggcacctcc	Protospacer
* * ************.*****.*****

21. spacer 42.2|9724578|28|NZ_CP012159|CRT matches to NZ_CP012944 (Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.857

ccctccgcgcacggacagcggcgcctcc	CRISPR spacer
cgcgccgcgcacggacggcggcacctcc	Protospacer
* * ************.*****.*****

22. spacer 42.2|9724578|28|NZ_CP012159|CRT matches to NZ_CP012688 (Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.857

ccctccgcgcacggacagcggcgcctcc	CRISPR spacer
cgcgccgcgcacggacggcggcacctcc	Protospacer
* * ************.*****.*****

23. spacer 42.2|9724578|28|NZ_CP012159|CRT matches to NC_017575 (Ralstonia solanacearum Po82 megaplasmid, complete sequence) position: , mismatch: 4, identity: 0.857

ccctccgcgcacggacagcggcgcctcc	CRISPR spacer
cgcgccgcgcacggacggcggcacctcc	Protospacer
* * ************.*****.*****

24. spacer 42.2|9724578|28|NZ_CP012159|CRT matches to NZ_CP026308 (Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.857

ccctccgcgcacggacagcggcgcctcc	CRISPR spacer
cgcgccgcgcacggacggcggcacctcc	Protospacer
* * ************.*****.*****

25. spacer 42.2|9724578|28|NZ_CP012159|CRT matches to CP047139 (Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.857

ccctccgcgcacggacagcggcgcctcc	CRISPR spacer
cgcgccgcgcacggacggcggcacctcc	Protospacer
* * ************.*****.*****

26. spacer 42.2|9724578|28|NZ_CP012159|CRT matches to NZ_CP051295 (Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence) position: , mismatch: 4, identity: 0.857

ccctccgcgcacggacagcggcgcctcc	CRISPR spacer
cgcgccgcgcacggacggcggcacctcc	Protospacer
* * ************.*****.*****

27. spacer 42.2|9724578|28|NZ_CP012159|CRT matches to CP047137 (Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.857

ccctccgcgcacggacagcggcgcctcc	CRISPR spacer
cgcgccgcgcacggacggcggcacctcc	Protospacer
* * ************.*****.*****

28. spacer 42.3|9724626|28|NZ_CP012159|CRT matches to NZ_CP021653 (Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.857

ccctccgcgcacggacagcggcgcctcc	CRISPR spacer
cgcgccgcgcacggacggcggcacctcc	Protospacer
* * ************.*****.*****

29. spacer 42.3|9724626|28|NZ_CP012159|CRT matches to NZ_CP012940 (Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.857

ccctccgcgcacggacagcggcgcctcc	CRISPR spacer
cgcgccgcgcacggacggcggcacctcc	Protospacer
* * ************.*****.*****

30. spacer 42.3|9724626|28|NZ_CP012159|CRT matches to NZ_CP012944 (Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.857

ccctccgcgcacggacagcggcgcctcc	CRISPR spacer
cgcgccgcgcacggacggcggcacctcc	Protospacer
* * ************.*****.*****

31. spacer 42.3|9724626|28|NZ_CP012159|CRT matches to NZ_CP012688 (Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.857

ccctccgcgcacggacagcggcgcctcc	CRISPR spacer
cgcgccgcgcacggacggcggcacctcc	Protospacer
* * ************.*****.*****

32. spacer 42.3|9724626|28|NZ_CP012159|CRT matches to NC_017575 (Ralstonia solanacearum Po82 megaplasmid, complete sequence) position: , mismatch: 4, identity: 0.857

ccctccgcgcacggacagcggcgcctcc	CRISPR spacer
cgcgccgcgcacggacggcggcacctcc	Protospacer
* * ************.*****.*****

33. spacer 42.3|9724626|28|NZ_CP012159|CRT matches to NZ_CP026308 (Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.857

ccctccgcgcacggacagcggcgcctcc	CRISPR spacer
cgcgccgcgcacggacggcggcacctcc	Protospacer
* * ************.*****.*****

34. spacer 42.3|9724626|28|NZ_CP012159|CRT matches to CP047139 (Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.857

ccctccgcgcacggacagcggcgcctcc	CRISPR spacer
cgcgccgcgcacggacggcggcacctcc	Protospacer
* * ************.*****.*****

35. spacer 42.3|9724626|28|NZ_CP012159|CRT matches to NZ_CP051295 (Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence) position: , mismatch: 4, identity: 0.857

ccctccgcgcacggacagcggcgcctcc	CRISPR spacer
cgcgccgcgcacggacggcggcacctcc	Protospacer
* * ************.*****.*****

36. spacer 42.3|9724626|28|NZ_CP012159|CRT matches to CP047137 (Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.857

ccctccgcgcacggacagcggcgcctcc	CRISPR spacer
cgcgccgcgcacggacggcggcacctcc	Protospacer
* * ************.*****.*****

37. spacer 12.1|3431033|25|NZ_CP012159|CRISPRCasFinder matches to NZ_CP007510 (Pseudomonas stutzeri strain 19SMN4 plasmid pLIB119, complete plasmid) position: , mismatch: 5, identity: 0.8

cggtcgcagcaacgagacacccaga	CRISPR spacer
cacccgcagcaacgagacacccatg	Protospacer
*. .******************* .

38. spacer 30.73|7109384|24|NZ_CP012159|CRT matches to NC_007491 (Rhodococcus erythropolis PR4 plasmid pREL1, complete sequence) position: , mismatch: 5, identity: 0.792

tggctcaagctccagatcgcggtg	CRISPR spacer
gatctcaagctccagatcgcggga	Protospacer
 . ******************* .

39. spacer 30.73|7109384|24|NZ_CP012159|CRT matches to NZ_CP021355 (Rhodococcus sp. S2-17 plasmid pRB98, complete sequence) position: , mismatch: 5, identity: 0.792

tggctcaagctccagatcgcggtg	CRISPR spacer
gacctcaagctccagatcgcgggc	Protospacer
 . *******************

40. spacer 30.73|7109384|24|NZ_CP012159|CRT matches to NZ_CP050125 (Rhodococcus erythropolis strain KB1 plasmid plas1, complete sequence) position: , mismatch: 5, identity: 0.792

tggctcaagctccagatcgcggtg	CRISPR spacer
gatctcaagctccagatcgcggga	Protospacer
 . ******************* .

41. spacer 37.2|8340402|27|NZ_CP012159|CRT matches to NZ_CP040819 (Paraoceanicella profunda strain D4M1 plasmid pD4M1A, complete sequence) position: , mismatch: 5, identity: 0.815

ggatccgtcaagccctcgaagatgtcg	CRISPR spacer
tccgccgtcacgccctcgaagatgtcg	Protospacer
    ****** ****************

42. spacer 42.4|9724674|28|NZ_CP012159|CRT matches to NZ_CP020539 (Sphingobium herbicidovorans strain MH plasmid pMSHV, complete sequence) position: , mismatch: 5, identity: 0.821

tcccgggcgcggcggcgtcagcgcagga	CRISPR spacer
tggcgcgcgcggcggcgtgagcgcaggt	Protospacer
*  ** ************ ********

43. spacer 22.1|5458148|29|NZ_CP012159|PILER-CR matches to CP040041 (Acinetobacter baumannii strain VB958 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.793

tgaagtgtggccatcacctgagaaatgct	CRISPR spacer
tttagtgtggccataacctgagaaatata	Protospacer
*  *********** ***********..

44. spacer 30.3|7109384|31|NZ_CP012159|CRISPRCasFinder matches to NZ_CP015008 (Aminobacter aminovorans strain KCTC 2477 plasmid pAA03, complete sequence) position: , mismatch: 6, identity: 0.806

--tggctcaagctccagatcgcggtgatgctca	CRISPR spacer
gtcggat--agctccagtttgcggtgatgctca	Protospacer
  .** *  ******** *.*************

45. spacer 30.15|7110224|35|NZ_CP012159|CRISPRCasFinder,CRT,PILER-CR matches to KJ680225 (Uncultured bacterium plasmid PLAsvaD clone PLAsvaD-1, complete sequence) position: , mismatch: 6, identity: 0.829

ttcgcgacgctcacgccaccgtcgcgcgcctggac	CRISPR spacer
tccgagacggtcacgccaccgtcgcgcgccttctc	Protospacer
*.** **** *********************   *

46. spacer 42.2|9724578|28|NZ_CP012159|CRT matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 6, identity: 0.786

ccctccgcgcacggacagcggcgcctcc	CRISPR spacer
ggtgccgcgcagggacggcggcgcctcc	Protospacer
  . ******* ****.***********

47. spacer 42.2|9724578|28|NZ_CP012159|CRT matches to NZ_CP024423 (Paracoccus yeei strain TT13 plasmid pTT13-1, complete sequence) position: , mismatch: 6, identity: 0.786

ccctccgcgcacggacagcggcgcctcc	CRISPR spacer
cgaaccgcgcacgaacagccgcgcctcg	Protospacer
*   *********.***** *******

48. spacer 42.2|9724578|28|NZ_CP012159|CRT matches to NZ_CP020441 (Paracoccus yeei strain FDAARGOS_252 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.786

ccctccgcgcacggacagcggcgcctcc	CRISPR spacer
cgaaccgcgcacgaacagccgcgcctcg	Protospacer
*   *********.***** *******

49. spacer 42.2|9724578|28|NZ_CP012159|CRT matches to NC_022599 (Micrococcus sp. V7 plasmid pLMV7, complete sequence) position: , mismatch: 6, identity: 0.786

ccctccgcgcacggacagcggcgcctcc	CRISPR spacer
tcagccgcgcacggacagccgcgccatc	Protospacer
.*  *************** ***** .*

50. spacer 42.2|9724578|28|NZ_CP012159|CRT matches to NZ_CP016821 (Rhodococcus sp. p52 plasmid pDF01, complete sequence) position: , mismatch: 6, identity: 0.786

ccctccgcgcacggacagcggcgcctcc	CRISPR spacer
caccccgcgcacggtcagcggcgccgga	Protospacer
* *.********** **********

51. spacer 42.2|9724578|28|NZ_CP012159|CRT matches to NZ_CP031079 (Paracoccus yeei strain CCUG 32053 plasmid pYEE1, complete sequence) position: , mismatch: 6, identity: 0.786

ccctccgcgcacggacagcggcgcctcc	CRISPR spacer
cgaaccgcgcacgaacagccgcgcctcg	Protospacer
*   *********.***** *******

52. spacer 42.3|9724626|28|NZ_CP012159|CRT matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 6, identity: 0.786

ccctccgcgcacggacagcggcgcctcc	CRISPR spacer
ggtgccgcgcagggacggcggcgcctcc	Protospacer
  . ******* ****.***********

53. spacer 42.3|9724626|28|NZ_CP012159|CRT matches to NZ_CP024423 (Paracoccus yeei strain TT13 plasmid pTT13-1, complete sequence) position: , mismatch: 6, identity: 0.786

ccctccgcgcacggacagcggcgcctcc	CRISPR spacer
cgaaccgcgcacgaacagccgcgcctcg	Protospacer
*   *********.***** *******

54. spacer 42.3|9724626|28|NZ_CP012159|CRT matches to NZ_CP020441 (Paracoccus yeei strain FDAARGOS_252 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.786

ccctccgcgcacggacagcggcgcctcc	CRISPR spacer
cgaaccgcgcacgaacagccgcgcctcg	Protospacer
*   *********.***** *******

55. spacer 42.3|9724626|28|NZ_CP012159|CRT matches to NC_022599 (Micrococcus sp. V7 plasmid pLMV7, complete sequence) position: , mismatch: 6, identity: 0.786

ccctccgcgcacggacagcggcgcctcc	CRISPR spacer
tcagccgcgcacggacagccgcgccatc	Protospacer
.*  *************** ***** .*

56. spacer 42.3|9724626|28|NZ_CP012159|CRT matches to NZ_CP016821 (Rhodococcus sp. p52 plasmid pDF01, complete sequence) position: , mismatch: 6, identity: 0.786

ccctccgcgcacggacagcggcgcctcc	CRISPR spacer
caccccgcgcacggtcagcggcgccgga	Protospacer
* *.********** **********

57. spacer 42.3|9724626|28|NZ_CP012159|CRT matches to NZ_CP031079 (Paracoccus yeei strain CCUG 32053 plasmid pYEE1, complete sequence) position: , mismatch: 6, identity: 0.786

ccctccgcgcacggacagcggcgcctcc	CRISPR spacer
cgaaccgcgcacgaacagccgcgcctcg	Protospacer
*   *********.***** *******

58. spacer 42.4|9724674|28|NZ_CP012159|CRT matches to NZ_CP010326 (Pantoea sp. PSNIH1 plasmid pPSP-3a9, complete sequence) position: , mismatch: 6, identity: 0.786

tcccgggcgcggcggcgtcagcgcagga	CRISPR spacer
ggcctggcgcagcggcgtcagcgcagtg	Protospacer
  ** *****.*************** .

59. spacer 42.4|9724674|28|NZ_CP012159|CRT matches to NZ_LT853887 (Xanthomonas fragariae strain PD5205 plasmid pPD5205-21, complete sequence) position: , mismatch: 6, identity: 0.786

tcccgg---gcgcggcggcgtcagcgcagga	CRISPR spacer
---cgagctgcgcggcggcgtcagcgaaggc	Protospacer
   **.   ***************** ***

60. spacer 42.4|9724674|28|NZ_CP012159|CRT matches to NZ_CP016835 (Xanthomonas fragariae isolate Fap29 plasmid pFap29-2, complete sequence) position: , mismatch: 6, identity: 0.786

tcccgg---gcgcggcggcgtcagcgcagga	CRISPR spacer
---cgagctgcgcggcggcgtcagcgaaggc	Protospacer
   **.   ***************** ***

61. spacer 42.4|9724674|28|NZ_CP012159|CRT matches to NC_008537 (Arthrobacter sp. FB24 plasmid 1, complete sequence) position: , mismatch: 6, identity: 0.786

tcccgggcgcggcggcgtcagcgcagga	CRISPR spacer
gtccgggagcggcggcgtcagcgaacgc	Protospacer
 .***** *************** * *

62. spacer 42.4|9724674|28|NZ_CP012159|CRT matches to NC_008538 (Arthrobacter sp. FB24 plasmid 2, complete sequence) position: , mismatch: 6, identity: 0.786

tcccgggcgcggcggcgtcagcgcagga	CRISPR spacer
gtccgggagcggcggcgtcagcgaacgc	Protospacer
 .***** *************** * *

63. spacer 42.4|9724674|28|NZ_CP012159|CRT matches to NC_008539 (Arthrobacter sp. FB24 plasmid 3, complete sequence) position: , mismatch: 6, identity: 0.786

tcccgggcgcggcggcgtcagcgcagga	CRISPR spacer
gtccgggagcggcggcgtcagcgaacgc	Protospacer
 .***** *************** * *

64. spacer 42.4|9724674|28|NZ_CP012159|CRT matches to NZ_LT853881 (Xanthomonas fragariae strain NBC2815 plasmid pNBC2815-21, complete sequence) position: , mismatch: 6, identity: 0.786

tcccgg---gcgcggcggcgtcagcgcagga	CRISPR spacer
---cgagctgcgcggcggcgtcagcgaaggc	Protospacer
   **.   ***************** ***

65. spacer 42.4|9724674|28|NZ_CP012159|CRT matches to NZ_CP015739 (Shinella sp. HZN7 plasmid pShin-03, complete sequence) position: , mismatch: 6, identity: 0.786

tcccgggcgcggcggcgtcagcgcagga	CRISPR spacer
ttccgggcgcggcgtcgtcagcgtgcgc	Protospacer
*.************ ********.. *

66. spacer 42.4|9724674|28|NZ_CP012159|CRT matches to NZ_CP020952 (Rhizobium sp. CIAT894 plasmid pRheCIAT894e, complete sequence) position: , mismatch: 6, identity: 0.786

tcccgggcgcggcggcgtcagcgcagga	CRISPR spacer
caccgggcgcggcgccgtcagcggcgaa	Protospacer
. ************ ********  *.*

67. spacer 42.4|9724674|28|NZ_CP012159|CRT matches to NZ_CP010729 (Phaeobacter inhibens strain P88 plasmid pP88_d, complete sequence) position: , mismatch: 6, identity: 0.786

tcccgggcgcggcggcgtcagcgcagga	CRISPR spacer
tgccgggcgcggcggcgtcaccggcgac	Protospacer
* ****************** **  *.

68. spacer 42.4|9724674|28|NZ_CP012159|CRT matches to NZ_CP013556 (Rhizobium phaseoli strain N931 plasmid pRphaN931d, complete sequence) position: , mismatch: 6, identity: 0.786

tcccgggcgcggcggcgtcagcgcagga	CRISPR spacer
caccgggcgcggcgccgtcagcggcgaa	Protospacer
. ************ ********  *.*

69. spacer 42.4|9724674|28|NZ_CP012159|CRT matches to NZ_CP013562 (Rhizobium phaseoli strain N841 plasmid pRphaN841e, complete sequence) position: , mismatch: 6, identity: 0.786

tcccgggcgcggcggcgtcagcgcagga	CRISPR spacer
caccgggcgcggcgccgtcagcggcgaa	Protospacer
. ************ ********  *.*

70. spacer 42.4|9724674|28|NZ_CP012159|CRT matches to NZ_CP013567 (Rhizobium phaseoli strain N831 plasmid pRphaN831d, complete sequence) position: , mismatch: 6, identity: 0.786

tcccgggcgcggcggcgtcagcgcagga	CRISPR spacer
caccgggcgcggcgccgtcagcggcgaa	Protospacer
. ************ ********  *.*

71. spacer 42.4|9724674|28|NZ_CP012159|CRT matches to NZ_CP035002 (Rhizobium acidisoli strain FH23 plasmid pRapFH23d, complete sequence) position: , mismatch: 6, identity: 0.786

tcccgggcgcggcggcgtcagcgcagga	CRISPR spacer
caccgggcgcggcgccgtcagcggcgaa	Protospacer
. ************ ********  *.*

72. spacer 24.1|5707948|31|NZ_CP012159|CRISPRCasFinder matches to CP054927 (Streptomyces fulvissimus strain NA06532 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.774

ggagagagcagtggccgtgggcaggtgccgc	CRISPR spacer
ggagagggcagtggccgtggccaacggcacc	Protospacer
******.************* **.  **  *

73. spacer 29.27|7097535|34|NZ_CP012159|CRISPRCasFinder,CRT matches to NZ_LR134450 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 8, complete sequence) position: , mismatch: 7, identity: 0.794

cagacgcgctcctcgctggcgtcgccgcactccc---	CRISPR spacer
cagacgcgcacctcggtggcgtcgtc---ctcgcggt	Protospacer
********* ***** ********.*   *** *

74. spacer 29.39|7098399|37|NZ_CP012159|CRISPRCasFinder,CRT matches to NZ_CP022081 (Burkholderia cepacia strain FDAARGOS_345 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.811

gcgcgcggcgccgagctgctcgccgt-tgctgtctgtt	CRISPR spacer
gcgctcggcgccgcgctgctcgccgtgtacggcgtgt-	Protospacer
**** ******** ************ *.* *. ***

75. spacer 29.39|7098399|37|NZ_CP012159|CRISPRCasFinder,CRT matches to NZ_CP012984 (Burkholderia cepacia ATCC 25416 strain UCB 717 plasmid pBC25416) position: , mismatch: 7, identity: 0.811

gcgcgcggcgccgagctgctcgccgt-tgctgtctgtt	CRISPR spacer
gcgctcggcgccgcgctgctcgccgtgtacggcgtgt-	Protospacer
**** ******** ************ *.* *. ***

76. spacer 29.39|7098399|37|NZ_CP012159|CRISPRCasFinder,CRT matches to NZ_CP012984 (Burkholderia cepacia ATCC 25416 strain UCB 717 plasmid pBC25416) position: , mismatch: 7, identity: 0.811

gcgcgcggcgccgagctgctcgccgt-tgctgtctgtt	CRISPR spacer
gcgctcggcgccgcgctgctcgccgtgtacggcgtgt-	Protospacer
**** ******** ************ *.* *. ***

77. spacer 29.39|7098399|37|NZ_CP012159|CRISPRCasFinder,CRT matches to NZ_CP034556 (Burkholderia cepacia ATCC 25416 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.811

gcgcgcggcgccgagctgctcgccgt-tgctgtctgtt	CRISPR spacer
gcgctcggcgccgcgctgctcgccgtgtacggcgtgt-	Protospacer
**** ******** ************ *.* *. ***

78. spacer 29.77|7097536|34|NZ_CP012159|PILER-CR matches to NZ_LR134450 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 8, complete sequence) position: , mismatch: 7, identity: 0.794

cagacgcgctcctcgctggcgtcgccgcactccc---	CRISPR spacer
cagacgcgcacctcggtggcgtcgtc---ctcgcggt	Protospacer
********* ***** ********.*   *** *

79. spacer 29.89|7098400|37|NZ_CP012159|PILER-CR matches to NZ_CP022081 (Burkholderia cepacia strain FDAARGOS_345 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.811

gcgcgcggcgccgagctgctcgccgt-tgctgtctgtt	CRISPR spacer
gcgctcggcgccgcgctgctcgccgtgtacggcgtgt-	Protospacer
**** ******** ************ *.* *. ***

80. spacer 29.89|7098400|37|NZ_CP012159|PILER-CR matches to NZ_CP012984 (Burkholderia cepacia ATCC 25416 strain UCB 717 plasmid pBC25416) position: , mismatch: 7, identity: 0.811

gcgcgcggcgccgagctgctcgccgt-tgctgtctgtt	CRISPR spacer
gcgctcggcgccgcgctgctcgccgtgtacggcgtgt-	Protospacer
**** ******** ************ *.* *. ***

81. spacer 29.89|7098400|37|NZ_CP012159|PILER-CR matches to NZ_CP012984 (Burkholderia cepacia ATCC 25416 strain UCB 717 plasmid pBC25416) position: , mismatch: 7, identity: 0.811

gcgcgcggcgccgagctgctcgccgt-tgctgtctgtt	CRISPR spacer
gcgctcggcgccgcgctgctcgccgtgtacggcgtgt-	Protospacer
**** ******** ************ *.* *. ***

82. spacer 29.89|7098400|37|NZ_CP012159|PILER-CR matches to NZ_CP034556 (Burkholderia cepacia ATCC 25416 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.811

gcgcgcggcgccgagctgctcgccgt-tgctgtctgtt	CRISPR spacer
gcgctcggcgccgcgctgctcgccgtgtacggcgtgt-	Protospacer
**** ******** ************ *.* *. ***

83. spacer 30.3|7109384|31|NZ_CP012159|CRISPRCasFinder matches to NZ_CP025986 (Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence) position: , mismatch: 7, identity: 0.774

tggctcaagctccagatcgcggtgatgctca---	CRISPR spacer
tacctcaagcgccagatcgcgctga---tcaagc	Protospacer
*. ******* ********** ***   ***

84. spacer 30.9|7109797|34|NZ_CP012159|CRISPRCasFinder,CRT,PILER-CR matches to NC_012586 (Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence) position: , mismatch: 7, identity: 0.794

tccggatcc--cagcgcggccgttcgtcggcccggt	CRISPR spacer
--aggatctggcagggcggccgttcgtcgggccggc	Protospacer
   *****.  *** *************** ****.

85. spacer 30.55|7113109|35|NZ_CP012159|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009293 (Novosphingobium pentaromativorans US6-1 plasmid pLA4, complete sequence) position: , mismatch: 7, identity: 0.8

tcaggtcgcgcgcgacaccggtcc-ggtcaacatgt	CRISPR spacer
tccggtcgcgcgcgagaccggtccggggcgatatc-	Protospacer
** ************ ******** ** *.*.**

86. spacer 31.1|7334061|31|NZ_CP012159|CRISPRCasFinder matches to NZ_CP010698 (Phaeobacter inhibens strain P24 plasmid pP24_b, complete sequence) position: , mismatch: 7, identity: 0.774

gtgatgcaagcaccccgcattgcgtatcccg	CRISPR spacer
gacttcgaagcaccgcgcattgcgtatccag	Protospacer
*   *  ******* ************** *

87. spacer 42.2|9724578|28|NZ_CP012159|CRT matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.75

ccctccgcgcacggacagcggcgcctcc	CRISPR spacer
ggtgccgcgcagggacggcggcgcctcg	Protospacer
  . ******* ****.**********

88. spacer 42.2|9724578|28|NZ_CP012159|CRT matches to NZ_CP013110 (Sinorhizobium americanum strain CFNEI 73 plasmid C, complete sequence) position: , mismatch: 7, identity: 0.75

ccctccgcgcacggacagcggcgcctcc	CRISPR spacer
gagaccgcgcacgtgcagcggcgcctcg	Protospacer
    ********* .************

89. spacer 42.2|9724578|28|NZ_CP012159|CRT matches to NZ_CP016451 (Sinorhizobium sp. RAC02 plasmid pBSY16_2, complete sequence) position: , mismatch: 7, identity: 0.75

ccctccgcgcacggacagcggcgcctcc	CRISPR spacer
atcggatcgcacggtcagcggcgcctcc	Protospacer
 .*    ******* *************

90. spacer 42.3|9724626|28|NZ_CP012159|CRT matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.75

ccctccgcgcacggacagcggcgcctcc	CRISPR spacer
ggtgccgcgcagggacggcggcgcctcg	Protospacer
  . ******* ****.**********

91. spacer 42.3|9724626|28|NZ_CP012159|CRT matches to NZ_CP013110 (Sinorhizobium americanum strain CFNEI 73 plasmid C, complete sequence) position: , mismatch: 7, identity: 0.75

ccctccgcgcacggacagcggcgcctcc	CRISPR spacer
gagaccgcgcacgtgcagcggcgcctcg	Protospacer
    ********* .************

92. spacer 42.3|9724626|28|NZ_CP012159|CRT matches to NZ_CP016451 (Sinorhizobium sp. RAC02 plasmid pBSY16_2, complete sequence) position: , mismatch: 7, identity: 0.75

ccctccgcgcacggacagcggcgcctcc	CRISPR spacer
atcggatcgcacggtcagcggcgcctcc	Protospacer
 .*    ******* *************

93. spacer 42.4|9724674|28|NZ_CP012159|CRT matches to NZ_CP048110 (Klebsiella michiganensis strain BD177 plasmid unnamed2) position: , mismatch: 7, identity: 0.75

tcccgggcgcggcggcgtcagcgcagga	CRISPR spacer
gggcgggagcggcggcgtcagcgcaccc	Protospacer
   **** *****************

94. spacer 42.4|9724674|28|NZ_CP012159|CRT matches to NZ_CP007734 (Klebsiella pneumoniae subsp. pneumoniae KPNIH27 plasmid pKPN-262, complete sequence) position: , mismatch: 7, identity: 0.75

tcccgggcgcggcggcgtcagcgcagga	CRISPR spacer
tcccggcctcggcggcgtcagcggcaat	Protospacer
****** * **************  ..

95. spacer 42.4|9724674|28|NZ_CP012159|CRT matches to NZ_CP020911 (Rhizobium etli strain NXC12 plasmid pRetNXC12e, complete sequence) position: , mismatch: 7, identity: 0.75

tcccgggcgcggcggcgtcagcgcagga	CRISPR spacer
caccgggcgcggcgccgtcagcggcgag	Protospacer
. ************ ********  *..

96. spacer 42.4|9724674|28|NZ_CP012159|CRT matches to NZ_CP029833 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.75

tcccgggcgcggcggcgtcagcgcagga	CRISPR spacer
cggcttgcgcggcggcgtcagcgcgggc	Protospacer
.  *  ******************.**

97. spacer 29.39|7098399|37|NZ_CP012159|CRISPRCasFinder,CRT matches to NC_010553 (Burkholderia ambifaria MC40-6 plasmid pBMC401, complete sequence) position: , mismatch: 8, identity: 0.784

gcgcgcggcgccgagctgctcgccgt-tgctgtctgtt	CRISPR spacer
gcgctcggcgccgcgctgctcgccgtgtacggcgtat-	Protospacer
**** ******** ************ *.* *. *.*

98. spacer 29.39|7098399|37|NZ_CP012159|CRISPRCasFinder,CRT matches to NC_010553 (Burkholderia ambifaria MC40-6 plasmid pBMC401, complete sequence) position: , mismatch: 8, identity: 0.784

gcgcgcggcgccgagctgctcgccgt-tgctgtctgtt	CRISPR spacer
gcgctcggcgccgcgctgctcgccgtgtacggcgtat-	Protospacer
**** ******** ************ *.* *. *.*

99. spacer 29.89|7098400|37|NZ_CP012159|PILER-CR matches to NC_010553 (Burkholderia ambifaria MC40-6 plasmid pBMC401, complete sequence) position: , mismatch: 8, identity: 0.784

gcgcgcggcgccgagctgctcgccgt-tgctgtctgtt	CRISPR spacer
gcgctcggcgccgcgctgctcgccgtgtacggcgtat-	Protospacer
**** ******** ************ *.* *. *.*

100. spacer 29.89|7098400|37|NZ_CP012159|PILER-CR matches to NC_010553 (Burkholderia ambifaria MC40-6 plasmid pBMC401, complete sequence) position: , mismatch: 8, identity: 0.784

gcgcgcggcgccgagctgctcgccgt-tgctgtctgtt	CRISPR spacer
gcgctcggcgccgcgctgctcgccgtgtacggcgtat-	Protospacer
**** ******** ************ *.* *. *.*

101. spacer 30.3|7109384|31|NZ_CP012159|CRISPRCasFinder matches to CP000662 (Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01, complete sequence) position: , mismatch: 8, identity: 0.742

tggctcaagctccagatcgcggtgatgctca	CRISPR spacer
gggctcaagctcgagatcgcgctgctccggc	Protospacer
 *********** ******** ** * *

102. spacer 30.3|7109384|31|NZ_CP012159|CRISPRCasFinder matches to CP000666 (Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA05, complete sequence) position: , mismatch: 8, identity: 0.742

tggctcaagctccagatcgcggtgatgctca	CRISPR spacer
gggctcaagctcgagatcgcgctgctccggc	Protospacer
 *********** ******** ** * *

103. spacer 30.3|7109384|31|NZ_CP012159|CRISPRCasFinder matches to NZ_CP031752 (Rhodobacter sphaeroides strain EBL0706 plasmid p.A, complete sequence) position: , mismatch: 8, identity: 0.742

tggctcaagctccagatcgcggtgatgctca	CRISPR spacer
gggctcaagctcgagatcgcgctgctccggc	Protospacer
 *********** ******** ** * *

104. spacer 30.16|7110295|35|NZ_CP012159|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021083 (Deinococcus ficus strain CC-FR2-10 plasmid pDFI2, complete sequence) position: , mismatch: 8, identity: 0.771

agcgtc-tcgagggtggcgtaggcggcggtggcgtc	CRISPR spacer
-gcgccggtgagggtggcgagggcggcggtggcgag	Protospacer
 ***.*  .********** .*************

105. spacer 30.29|7111230|34|NZ_CP012159|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054613 (Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence) position: , mismatch: 8, identity: 0.765

cctgcaccgcctccgccagttcaccaa-cgctctt	CRISPR spacer
agcgctccgcctccgcctgttcaccaagcgctgc-	Protospacer
  .** *********** ********* **** .

106. spacer 30.53|7112966|34|NZ_CP012159|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020399 (Burkholderia multivorans strain FDAARGOS_246 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.765

gcgagcgctgcgtccaatccgtgcggcgcctgcc	CRISPR spacer
tccagcgctgcgtccattcggtgcggcgcgggtt	Protospacer
 * ************* ** *********  *..

107. spacer 30.67|7113967|34|NZ_CP012159|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023549 (Rhodobacter sp. CZR27 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.765

ccgaaatggcggactccgcgaacgccgtgctgcc	CRISPR spacer
acgacgttccggccaccgcgaacgccgtgctgct	Protospacer
 *** .*  *** * ******************.

108. spacer 42.2|9724578|28|NZ_CP012159|CRT matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.714

ccctccgcgcacggacagcggcgcctcc	CRISPR spacer
ggaaccgcgcccggacagcggcgccgat	Protospacer
    ****** **************  .

109. spacer 42.3|9724626|28|NZ_CP012159|CRT matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.714

ccctccgcgcacggacagcggcgcctcc	CRISPR spacer
ggaaccgcgcccggacagcggcgccgat	Protospacer
    ****** **************  .

110. spacer 15.7|3520688|35|NZ_CP012159|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031166 (Euzebya sp. DY32-46 plasmid pEDY32-46I, complete sequence) position: , mismatch: 9, identity: 0.743

cagtcgatcggatcgttcgatgacgagggcgacga	CRISPR spacer
cttgcggctggatcggtcgatggcgagggcgacgt	Protospacer
*   **...****** ******.***********

111. spacer 17.10|4524714|37|NZ_CP012159|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029357 (Azospirillum sp. CFH 70021 plasmid unnamed2) position: , mismatch: 9, identity: 0.757

gagggcgtcgagcacgatcaggctgacgatgtagccg-	CRISPR spacer
ctgggcatcgaccacgatcaggctgacg-tccagcttc	Protospacer
  ****.**** **************** * .***.

112. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to MT553346 (Mycobacterium phage Scamp, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

113. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to MH536817 (Mycobacterium phage Druantia, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

114. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to MF919496 (Mycobacterium phage Cerulean, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

115. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to JX307703 (Mycobacterium phage Sabertooth, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

116. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to JQ896627 (Mycobacterium phage ICleared, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

117. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to MH020249 (Mycobacterium phage Skipitt, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

118. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to MH697588 (Mycobacterium phage Jaykayelowell, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

119. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to MH479911 (Mycobacterium phage Eapen, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

120. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to KF024733 (Mycobacterium phage Medusa, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

121. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to MF919509 (Mycobacterium phage JetBlade, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

122. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to KY204251 (Mycobacterium phage Thanksgivukkah, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

123. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to JF792674 (Mycobacterium phage Shaka, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

124. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to KY204245 (Mycobacterium phage Camperdownii, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

125. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to MK494088 (Mycobacterium phage Mazhar510, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

126. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to MK494094 (Mycobacterium phage DirtyDunning, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

127. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to MK359340 (Mycobacterium phage Phontbonne, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

128. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to MG944217 (Mycobacterium phage Phacado, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

129. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to MH155875 (Mycobacterium phage Pipcraft, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

130. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to MT490373 (Mycobacterium phage OKaNui, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttgct	Protospacer
* ******* **** ************ .**.

131. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to MK494101 (Mycobacterium phage Connomayer, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

132. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to MH825710 (Mycobacterium phage Ruin, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

133. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to KT716493 (Mycobacterium phage Caelakin, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

134. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to MG944224 (Mycobacterium phage Wander, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

135. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to MK359301 (Mycobacterium phage Kingmustik0402, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

136. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to MK494126 (Mycobacterium phage PeterPeter, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

137. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to KY083058 (Mycobacterium phage Abdiel, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

138. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to MT889390 (Mycobacterium phage Bartimeaus, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

139. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to KX808130 (Mycobacterium phage Broseidon, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

140. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to MK494097 (Mycobacterium phage Lorenzo, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

141. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to KY204250 (Mycobacterium phage Kratark, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

142. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to MK359323 (Mycobacterium phage Baby16, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

143. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to KY083060 (Mycobacterium phage Bruiser, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

144. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to KX557234 (Mycobacterium phage Florean, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

145. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to KT365397 (Mycobacterium phage Maverick, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

146. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to JN243856 (Mycobacterium phage MeeZee, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

147. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to MK494125 (Mycobacterium phage Kyee, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

148. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to MH509443 (Mycobacterium phage Avle17, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

149. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to KC661271 (Mycobacterium phage Dhanush, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

150. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to MH155879 (Mycobacterium phage Relief, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

151. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to MK359310 (Mycobacterium phage Katalie136, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

152. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to MK279898 (Mycobacterium phage Cici, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

153. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to MK310145 (Mycobacterium phage Lemur, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

154. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to KY204247 (Mycobacterium phage Funston, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

155. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to MH230877 (Mycobacterium phage NorthStar, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

156. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to MK359356 (Mycobacterium phage Nebs, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

157. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to HM152766 (Mycobacterium phage Eagle, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

158. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to MH479909 (Mycobacterium phage Commander, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

159. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to MG099942 (Mycobacterium phage Blackmoor, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

160. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to MT889386 (Mycobacterium phage CentreCat, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

161. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to KX619651 (Mycobacterium phage Roosevelt, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

162. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to MK494093 (Mycobacterium phage Phighter1804, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

163. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to KY549155 (Mycobacterium phage Tinybot, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

164. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to KF841476 (Mycobacterium phage Melvin, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

165. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to KY083062 (Mycobacterium phage Millski, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

166. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to MF919498 (Mycobacterium phage Cindaradix, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

167. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to KX648373 (Mycobacterium phage Cocoaberry, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

168. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to NC_023562 (Mycobacterium phage BellusTerra, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

169. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to MK279902 (Mycobacterium phage Citius, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

170. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to KP027198 (Mycobacterium phage Gadost, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

171. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to MN728684 (Mycobacterium phage Ohfah, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

172. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to MK878905 (Mycobacterium phage TygerBlood, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

173. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to MK359325 (Mycobacterium phage Eros, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

174. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to NC_024141 (Mycobacterium phage Kampy, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

175. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to NC_028687 (Mycobacterium phage Iracema64, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

176. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to MT889382 (Mycobacterium phage TroyPia, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

177. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to KY471266 (Mycobacterium phage TinaFeyge, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

178. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to JN561150 (Mycobacterium phage TiroTheta9, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

179. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to KX458236 (Mycobacterium phage Wilbur, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

180. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to MT498056 (Mycobacterium phage Chaph, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

181. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to NC_013694 (Mycobacterium virus Peaches, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

182. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to JN699015 (Mycobacterium virus LHTSCC, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

183. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to KY204246 (Mycobacterium phage Clarenza, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

184. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to KY083063 (Mycobacterium phage Eris, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

185. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to MK494115 (Mycobacterium phage Bumblebee11, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

186. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to MT114158 (Mycobacterium phage Polymorphads, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

187. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to MH727563 (Mycobacterium phage Wizard007, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

188. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to KY204249 (Mycobacterium phage KFPoly, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

189. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to MH651170 (Mycobacterium phage ChampagnePapi, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

190. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to MT818417 (Mycobacterium phage Maxo, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

191. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to KY083061 (Mycobacterium phage Palestino, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

192. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to KU867906 (Mycobacterium phage Romney, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

193. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to KY204244 (Mycobacterium phage BubbleTrouble, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

194. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to NC_023577 (Mycobacterium phage Obama12, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

195. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to MK878895 (Mycobacterium phage SheldonCooper, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

196. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to MT723939 (Mycobacterium phage Bombshell, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

197. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to MH051247 (Mycobacterium phage Annyong, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

198. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to MG962373 (Mycobacterium phage Morrow, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

199. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to KF954506 (Mycobacterium phage Nyxis, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

200. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to MH399777 (Mycobacterium phage Houdini22, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

201. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to KX817174 (Mycobacterium phage LittleB, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

202. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to KX550441 (Mycobacterium phage LittleGuy, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

203. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to KU985092 (Mycobacterium phage Holli, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

204. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to KP057620 (Mycobacterium phage HamSlice, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

205. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to KX579975 (Mycobacterium phage Mundrea, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

206. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to MF668278 (Mycobacterium phage Morpher26, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

207. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to MH399785 (Mycobacterium phage NotAPhaseMom, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

208. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to KU985094 (Mycobacterium phage Burger, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

209. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to KY006473 (Mycobacterium phage LeoAvram, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

210. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to NC_042339 (Mycobacterium virus Arturo, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

211. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to MT553338 (Mycobacterium phage Deano, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

212. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to KX817175 (Mycobacterium phage Albee, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

213. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to KY204248 (Mycobacterium phage JoongJeon, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

214. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to JQ809701 (Mycobacterium phage Flux, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

215. spacer 29.11|7096397|35|NZ_CP012159|CRISPRCasFinder,CRT matches to MH077581 (Mycobacterium phage Nemo27, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

216. spacer 29.27|7097535|34|NZ_CP012159|CRISPRCasFinder,CRT matches to NZ_CP048048 (Clavibacter michiganensis subsp. capsici strain 1106 plasmid pCM2_1106, complete sequence) position: , mismatch: 9, identity: 0.735

cagacgcgctcctcgctggcgtcgccgcactccc	CRISPR spacer
gcgacgcgctcctcgccggcgacgccgcgatggt	Protospacer
  **************.**** ******. *  .

217. spacer 29.27|7097535|34|NZ_CP012159|CRISPRCasFinder,CRT matches to NZ_CP012575 (Clavibacter michiganensis subsp. capsici strain PF008 plasmid pCM2, complete sequence) position: , mismatch: 9, identity: 0.735

cagacgcgctcctcgctggcgtcgccgcactccc	CRISPR spacer
gcgacgcgctcctcgccggcgacgccgcgatggt	Protospacer
  **************.**** ******. *  .

218. spacer 29.27|7097535|34|NZ_CP012159|CRISPRCasFinder,CRT matches to CP048046 (Clavibacter michiganensis subsp. capsici strain 1207 plasmid pCM2_1207, complete sequence) position: , mismatch: 9, identity: 0.735

cagacgcgctcctcgctggcgtcgccgcactccc	CRISPR spacer
gcgacgcgctcctcgccggcgacgccgcgatggt	Protospacer
  **************.**** ******. *  .

219. spacer 29.27|7097535|34|NZ_CP012159|CRISPRCasFinder,CRT matches to NZ_CP048050 (Clavibacter michiganensis subsp. capsici strain 1101 plasmid pCM2_1101, complete sequence) position: , mismatch: 9, identity: 0.735

cagacgcgctcctcgctggcgtcgccgcactccc	CRISPR spacer
gcgacgcgctcctcgccggcgacgccgcgatggt	Protospacer
  **************.**** ******. *  .

220. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to MT553346 (Mycobacterium phage Scamp, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

221. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to MH536817 (Mycobacterium phage Druantia, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

222. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to MF919496 (Mycobacterium phage Cerulean, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

223. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to JX307703 (Mycobacterium phage Sabertooth, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

224. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to JQ896627 (Mycobacterium phage ICleared, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

225. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to MH020249 (Mycobacterium phage Skipitt, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

226. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to MH697588 (Mycobacterium phage Jaykayelowell, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

227. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to MH479911 (Mycobacterium phage Eapen, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

228. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to KF024733 (Mycobacterium phage Medusa, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

229. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to MF919509 (Mycobacterium phage JetBlade, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

230. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to KY204251 (Mycobacterium phage Thanksgivukkah, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

231. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to JF792674 (Mycobacterium phage Shaka, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

232. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to KY204245 (Mycobacterium phage Camperdownii, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

233. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to MK494088 (Mycobacterium phage Mazhar510, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

234. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to MK494094 (Mycobacterium phage DirtyDunning, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

235. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to MK359340 (Mycobacterium phage Phontbonne, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

236. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to MG944217 (Mycobacterium phage Phacado, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

237. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to MH155875 (Mycobacterium phage Pipcraft, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

238. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to MT490373 (Mycobacterium phage OKaNui, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttgct	Protospacer
* ******* **** ************ .**.

239. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to MK494101 (Mycobacterium phage Connomayer, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

240. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to MH825710 (Mycobacterium phage Ruin, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

241. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to KT716493 (Mycobacterium phage Caelakin, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

242. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to MG944224 (Mycobacterium phage Wander, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

243. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to MK359301 (Mycobacterium phage Kingmustik0402, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

244. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to MK494126 (Mycobacterium phage PeterPeter, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

245. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to KY083058 (Mycobacterium phage Abdiel, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

246. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to MT889390 (Mycobacterium phage Bartimeaus, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

247. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to KX808130 (Mycobacterium phage Broseidon, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

248. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to MK494097 (Mycobacterium phage Lorenzo, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

249. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to KY204250 (Mycobacterium phage Kratark, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

250. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to MK359323 (Mycobacterium phage Baby16, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

251. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to KY083060 (Mycobacterium phage Bruiser, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

252. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to KX557234 (Mycobacterium phage Florean, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

253. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to KT365397 (Mycobacterium phage Maverick, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

254. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to JN243856 (Mycobacterium phage MeeZee, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

255. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to MK494125 (Mycobacterium phage Kyee, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

256. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to MH509443 (Mycobacterium phage Avle17, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

257. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to KC661271 (Mycobacterium phage Dhanush, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

258. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to MH155879 (Mycobacterium phage Relief, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

259. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to MK359310 (Mycobacterium phage Katalie136, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

260. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to MK279898 (Mycobacterium phage Cici, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

261. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to MK310145 (Mycobacterium phage Lemur, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

262. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to KY204247 (Mycobacterium phage Funston, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

263. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to MH230877 (Mycobacterium phage NorthStar, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

264. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to MK359356 (Mycobacterium phage Nebs, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

265. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to HM152766 (Mycobacterium phage Eagle, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

266. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to MH479909 (Mycobacterium phage Commander, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

267. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to MG099942 (Mycobacterium phage Blackmoor, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

268. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to MT889386 (Mycobacterium phage CentreCat, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

269. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to KX619651 (Mycobacterium phage Roosevelt, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

270. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to MK494093 (Mycobacterium phage Phighter1804, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

271. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to KY549155 (Mycobacterium phage Tinybot, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

272. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to KF841476 (Mycobacterium phage Melvin, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

273. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to KY083062 (Mycobacterium phage Millski, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

274. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to MF919498 (Mycobacterium phage Cindaradix, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

275. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to KX648373 (Mycobacterium phage Cocoaberry, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

276. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to NC_023562 (Mycobacterium phage BellusTerra, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

277. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to MK279902 (Mycobacterium phage Citius, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

278. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to KP027198 (Mycobacterium phage Gadost, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

279. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to MN728684 (Mycobacterium phage Ohfah, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

280. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to MK878905 (Mycobacterium phage TygerBlood, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

281. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to MK359325 (Mycobacterium phage Eros, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

282. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to NC_024141 (Mycobacterium phage Kampy, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

283. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to NC_028687 (Mycobacterium phage Iracema64, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

284. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to MT889382 (Mycobacterium phage TroyPia, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

285. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to KY471266 (Mycobacterium phage TinaFeyge, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

286. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to JN561150 (Mycobacterium phage TiroTheta9, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

287. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to KX458236 (Mycobacterium phage Wilbur, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

288. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to MT498056 (Mycobacterium phage Chaph, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

289. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to NC_013694 (Mycobacterium virus Peaches, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

290. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to JN699015 (Mycobacterium virus LHTSCC, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

291. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to KY204246 (Mycobacterium phage Clarenza, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

292. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to KY083063 (Mycobacterium phage Eris, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

293. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to MK494115 (Mycobacterium phage Bumblebee11, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

294. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to MT114158 (Mycobacterium phage Polymorphads, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

295. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to MH727563 (Mycobacterium phage Wizard007, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

296. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to KY204249 (Mycobacterium phage KFPoly, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

297. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to MH651170 (Mycobacterium phage ChampagnePapi, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

298. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to MT818417 (Mycobacterium phage Maxo, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

299. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to KY083061 (Mycobacterium phage Palestino, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

300. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to KU867906 (Mycobacterium phage Romney, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

301. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to KY204244 (Mycobacterium phage BubbleTrouble, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

302. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to NC_023577 (Mycobacterium phage Obama12, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

303. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to MK878895 (Mycobacterium phage SheldonCooper, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

304. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to MT723939 (Mycobacterium phage Bombshell, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

305. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to MH051247 (Mycobacterium phage Annyong, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

306. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to MG962373 (Mycobacterium phage Morrow, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

307. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to KF954506 (Mycobacterium phage Nyxis, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

308. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to MH399777 (Mycobacterium phage Houdini22, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

309. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to KX817174 (Mycobacterium phage LittleB, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

310. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to KX550441 (Mycobacterium phage LittleGuy, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

311. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to KU985092 (Mycobacterium phage Holli, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

312. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to KP057620 (Mycobacterium phage HamSlice, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

313. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to KX579975 (Mycobacterium phage Mundrea, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

314. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to MF668278 (Mycobacterium phage Morpher26, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

315. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to MH399785 (Mycobacterium phage NotAPhaseMom, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

316. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to KU985094 (Mycobacterium phage Burger, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

317. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to KY006473 (Mycobacterium phage LeoAvram, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

318. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to NC_042339 (Mycobacterium virus Arturo, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

319. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to MT553338 (Mycobacterium phage Deano, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

320. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to KX817175 (Mycobacterium phage Albee, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

321. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to KY204248 (Mycobacterium phage JoongJeon, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

322. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to JQ809701 (Mycobacterium phage Flux, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

323. spacer 29.61|7096398|35|NZ_CP012159|PILER-CR matches to MH077581 (Mycobacterium phage Nemo27, complete genome) position: , mismatch: 9, identity: 0.743

agcaccacccctcgccccgtgcggctcgcctccga	CRISPR spacer
atcaccaccgctcggcccgtgcggctcttcttact	Protospacer
* ******* **** ************ .**.

324. spacer 29.77|7097536|34|NZ_CP012159|PILER-CR matches to NZ_CP048048 (Clavibacter michiganensis subsp. capsici strain 1106 plasmid pCM2_1106, complete sequence) position: , mismatch: 9, identity: 0.735

cagacgcgctcctcgctggcgtcgccgcactccc	CRISPR spacer
gcgacgcgctcctcgccggcgacgccgcgatggt	Protospacer
  **************.**** ******. *  .

325. spacer 29.77|7097536|34|NZ_CP012159|PILER-CR matches to NZ_CP012575 (Clavibacter michiganensis subsp. capsici strain PF008 plasmid pCM2, complete sequence) position: , mismatch: 9, identity: 0.735

cagacgcgctcctcgctggcgtcgccgcactccc	CRISPR spacer
gcgacgcgctcctcgccggcgacgccgcgatggt	Protospacer
  **************.**** ******. *  .

326. spacer 29.77|7097536|34|NZ_CP012159|PILER-CR matches to CP048046 (Clavibacter michiganensis subsp. capsici strain 1207 plasmid pCM2_1207, complete sequence) position: , mismatch: 9, identity: 0.735

cagacgcgctcctcgctggcgtcgccgcactccc	CRISPR spacer
gcgacgcgctcctcgccggcgacgccgcgatggt	Protospacer
  **************.**** ******. *  .

327. spacer 29.77|7097536|34|NZ_CP012159|PILER-CR matches to NZ_CP048050 (Clavibacter michiganensis subsp. capsici strain 1101 plasmid pCM2_1101, complete sequence) position: , mismatch: 9, identity: 0.735

cagacgcgctcctcgctggcgtcgccgcactccc	CRISPR spacer
gcgacgcgctcctcgccggcgacgccgcgatggt	Protospacer
  **************.**** ******. *  .

328. spacer 30.3|7109384|31|NZ_CP012159|CRISPRCasFinder matches to NZ_CP013104 (Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.71

tggctcaagctccagatcgcggtgatgctca	CRISPR spacer
cccgtcacgctccagctcgcggtgatggcga	Protospacer
.   *** ******* *********** . *

329. spacer 30.3|7109384|31|NZ_CP012159|CRISPRCasFinder matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.71

tggctcaagctccagatcgcggtgatgctca	CRISPR spacer
cccgtcacgctccagctcgcggtgatggcga	Protospacer
.   *** ******* *********** . *

330. spacer 30.22|7110723|37|NZ_CP012159|CRISPRCasFinder,CRT,PILER-CR matches to NC_021056 (Streptomyces sp. PAMC 26508 plasmid pSP01, complete sequence) position: , mismatch: 9, identity: 0.757

tgccggagcct----gacacccgtccagacgcttccagagc	CRISPR spacer
----gcgggctcggagacacccgtccagacgcctccggagc	Protospacer
    * .* **    *****************.***.****

331. spacer 30.44|7112316|34|NZ_CP012159|CRISPRCasFinder,CRT,PILER-CR matches to NC_023498 (Mycobacterium phage Validus, complete genome) position: , mismatch: 9, identity: 0.735

tccgcagggtgggtgtcacagcgggcgcagtgaa	CRISPR spacer
gccttcttgtcggtgtcgcagcgggcgcagtgga	Protospacer
 ** .   ** ******.**************.*

332. spacer 30.75|7109524|33|NZ_CP012159|PILER-CR matches to NC_007765 (Rhizobium etli CFN 42 plasmid p42e, complete sequence) position: , mismatch: 9, identity: 0.727

accagcaggatcggcctcgtgcagccgctgcat	CRISPR spacer
ctggcccggatcgggctcgagcagccgctgcgt	Protospacer
 . . * ******* **** ***********.*

333. spacer 30.75|7109524|33|NZ_CP012159|PILER-CR matches to NZ_CP020909 (Rhizobium etli strain NXC12 plasmid pRetNXC12c, complete sequence) position: , mismatch: 9, identity: 0.727

accagcaggatcggcctcgtgcagccgctgcat	CRISPR spacer
ctggcccggatcgggctcgagcagccgctgcgt	Protospacer
 . . * ******* **** ***********.*

334. spacer 30.75|7109524|33|NZ_CP012159|PILER-CR matches to NC_021908 (Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1d, complete sequence) position: , mismatch: 9, identity: 0.727

accagcaggatcggcctcgtgcagccgctgcat	CRISPR spacer
ctggcccggatcgggctcgagcagccgctgcgt	Protospacer
 . . * ******* **** ***********.*

335. spacer 31.1|7334061|31|NZ_CP012159|CRISPRCasFinder matches to NZ_AP018440 (Undibacterium sp. KW1 plasmid pUKW01, complete sequence) position: , mismatch: 9, identity: 0.71

gtgatgcaagcaccccgcattgcgtatcccg	CRISPR spacer
gagatgcaagcacctcgcattgcggtctgtt	Protospacer
* ************.*********  .. .

336. spacer 35.2|7819876|34|NZ_CP012159|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032347 (Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence) position: , mismatch: 9, identity: 0.735

ggcgccggcgctctggcgtccgcgagaggtaggt	CRISPR spacer
ggcgccgtcgccctggcgtccgcgctgggcatcg	Protospacer
******* ***.************  .**.*

337. spacer 35.3|7819947|35|NZ_CP012159|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017303 (Rhodococcus sp. YL-1 plasmid pYLL1 sequence) position: , mismatch: 9, identity: 0.743

aacaccg-tctggtcgacgatggcgtcgtacaaggg	CRISPR spacer
-gcgcagacctggtcgacgatgccgtcgaacaagcc	Protospacer
 .*.* * .************* ***** *****

338. spacer 39.1|9159483|34|NZ_CP012159|CRISPRCasFinder matches to NZ_CP012886 (Mycobacterium chimaera strain AH16 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.735

gggatacgcccgcgggcgcgcctgcctctgaggc	CRISPR spacer
ctgacaacgccgctggcgcgcctgcctctgcgga	Protospacer
  **.*   **** **************** **

339. spacer 29.27|7097535|34|NZ_CP012159|CRISPRCasFinder,CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 10, identity: 0.706

cagacgcgctcctcgctggcgtcgccgcactccc	CRISPR spacer
acaccgcgctcatcgcgggcgtcgccgccagcgc	Protospacer
  . ******* **** ***********   * *

340. spacer 29.27|7097535|34|NZ_CP012159|CRISPRCasFinder,CRT matches to NZ_CP030864 (Streptomyces globosus strain LZH-48 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.706

cagacgcgctcctcgctggcgtcgccgcactccc	CRISPR spacer
tctacgcgctcctcgcgggcgtcggcgtcttcgg	Protospacer
.  ************* ******* **. .**

341. spacer 29.32|7097896|37|NZ_CP012159|CRISPRCasFinder,CRT matches to NZ_CP022775 (Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.73

ggattcggggcgcgccgagcggcggcaccacgggacg	CRISPR spacer
aggtcttctgcgcgccgagcggcggcacgacgcgatg	Protospacer
.*.*..   ******************* *** **.*

342. spacer 29.32|7097896|37|NZ_CP012159|CRISPRCasFinder,CRT matches to NC_014310 (Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence) position: , mismatch: 10, identity: 0.73

ggattcggggcgcgccgagcggcggcaccacgggacg	CRISPR spacer
aggtcttctgcgcgccgagcggcggcacgacgcgatg	Protospacer
.*.*..   ******************* *** **.*

343. spacer 29.32|7097896|37|NZ_CP012159|CRISPRCasFinder,CRT matches to NZ_CP022762 (Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.73

ggattcggggcgcgccgagcggcggcaccacgggacg	CRISPR spacer
aggtcttctgcgcgccgagcggcggcacgacgcgatg	Protospacer
.*.*..   ******************* *** **.*

344. spacer 29.32|7097896|37|NZ_CP012159|CRISPRCasFinder,CRT matches to NZ_CP023017 (Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.73

ggattcggggcgcgccgagcggcggcaccacgggacg	CRISPR spacer
aggtcttctgcgcgccgagcggcggcacgacgcgatg	Protospacer
.*.*..   ******************* *** **.*

345. spacer 29.32|7097896|37|NZ_CP012159|CRISPRCasFinder,CRT matches to NZ_CP014703 (Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence) position: , mismatch: 10, identity: 0.73

ggattcggggcgcgccgagcggcggcaccacgggacg	CRISPR spacer
aggtcttctgcgcgccgagcggcggcacgacgcgatg	Protospacer
.*.*..   ******************* *** **.*

346. spacer 29.32|7097896|37|NZ_CP012159|CRISPRCasFinder,CRT matches to NZ_CP022760 (Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.73

ggattcggggcgcgccgagcggcggcaccacgggacg	CRISPR spacer
aggtcttctgcgcgccgagcggcggcacgacgcgatg	Protospacer
.*.*..   ******************* *** **.*

347. spacer 29.32|7097896|37|NZ_CP012159|CRISPRCasFinder,CRT matches to NZ_CP022789 (Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.73

ggattcggggcgcgccgagcggcggcaccacgggacg	CRISPR spacer
aggtcttctgcgcgccgagcggcggcacgacgcgatg	Protospacer
.*.*..   ******************* *** **.*

348. spacer 29.32|7097896|37|NZ_CP012159|CRISPRCasFinder,CRT matches to NZ_CP022771 (Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.73

ggattcggggcgcgccgagcggcggcaccacgggacg	CRISPR spacer
aggtcttctgcgcgccgagcggcggcacgacgcgatg	Protospacer
.*.*..   ******************* *** **.*

349. spacer 29.32|7097896|37|NZ_CP012159|CRISPRCasFinder,CRT matches to NZ_CP022777 (Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.73

ggattcggggcgcgccgagcggcggcaccacgggacg	CRISPR spacer
aggtcttctgcgcgccgagcggcggcacgacgcgatg	Protospacer
.*.*..   ******************* *** **.*

350. spacer 29.32|7097896|37|NZ_CP012159|CRISPRCasFinder,CRT matches to NZ_CP022799 (Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.73

ggattcggggcgcgccgagcggcggcaccacgggacg	CRISPR spacer
aggtcttctgcgcgccgagcggcggcacgacgcgatg	Protospacer
.*.*..   ******************* *** **.*

351. spacer 29.32|7097896|37|NZ_CP012159|CRISPRCasFinder,CRT matches to NZ_CP022764 (Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.73

ggattcggggcgcgccgagcggcggcaccacgggacg	CRISPR spacer
aggtcttctgcgcgccgagcggcggcacgacgcgatg	Protospacer
.*.*..   ******************* *** **.*

352. spacer 29.32|7097896|37|NZ_CP012159|CRISPRCasFinder,CRT matches to NZ_CP022797 (Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.73

ggattcggggcgcgccgagcggcggcaccacgggacg	CRISPR spacer
aggtcttctgcgcgccgagcggcggcacgacgcgatg	Protospacer
.*.*..   ******************* *** **.*

353. spacer 29.32|7097896|37|NZ_CP012159|CRISPRCasFinder,CRT matches to NZ_CP022758 (Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.73

ggattcggggcgcgccgagcggcggcaccacgggacg	CRISPR spacer
aggtcttctgcgcgccgagcggcggcacgacgcgatg	Protospacer
.*.*..   ******************* *** **.*

354. spacer 29.77|7097536|34|NZ_CP012159|PILER-CR matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 10, identity: 0.706

cagacgcgctcctcgctggcgtcgccgcactccc	CRISPR spacer
acaccgcgctcatcgcgggcgtcgccgccagcgc	Protospacer
  . ******* **** ***********   * *

355. spacer 29.77|7097536|34|NZ_CP012159|PILER-CR matches to NZ_CP030864 (Streptomyces globosus strain LZH-48 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.706

cagacgcgctcctcgctggcgtcgccgcactccc	CRISPR spacer
tctacgcgctcctcgcgggcgtcggcgtcttcgg	Protospacer
.  ************* ******* **. .**

356. spacer 29.82|7097897|37|NZ_CP012159|PILER-CR matches to NZ_CP022775 (Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.73

ggattcggggcgcgccgagcggcggcaccacgggacg	CRISPR spacer
aggtcttctgcgcgccgagcggcggcacgacgcgatg	Protospacer
.*.*..   ******************* *** **.*

357. spacer 29.82|7097897|37|NZ_CP012159|PILER-CR matches to NC_014310 (Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence) position: , mismatch: 10, identity: 0.73

ggattcggggcgcgccgagcggcggcaccacgggacg	CRISPR spacer
aggtcttctgcgcgccgagcggcggcacgacgcgatg	Protospacer
.*.*..   ******************* *** **.*

358. spacer 29.82|7097897|37|NZ_CP012159|PILER-CR matches to NZ_CP022762 (Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.73

ggattcggggcgcgccgagcggcggcaccacgggacg	CRISPR spacer
aggtcttctgcgcgccgagcggcggcacgacgcgatg	Protospacer
.*.*..   ******************* *** **.*

359. spacer 29.82|7097897|37|NZ_CP012159|PILER-CR matches to NZ_CP023017 (Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.73

ggattcggggcgcgccgagcggcggcaccacgggacg	CRISPR spacer
aggtcttctgcgcgccgagcggcggcacgacgcgatg	Protospacer
.*.*..   ******************* *** **.*

360. spacer 29.82|7097897|37|NZ_CP012159|PILER-CR matches to NZ_CP014703 (Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence) position: , mismatch: 10, identity: 0.73

ggattcggggcgcgccgagcggcggcaccacgggacg	CRISPR spacer
aggtcttctgcgcgccgagcggcggcacgacgcgatg	Protospacer
.*.*..   ******************* *** **.*

361. spacer 29.82|7097897|37|NZ_CP012159|PILER-CR matches to NZ_CP022760 (Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.73

ggattcggggcgcgccgagcggcggcaccacgggacg	CRISPR spacer
aggtcttctgcgcgccgagcggcggcacgacgcgatg	Protospacer
.*.*..   ******************* *** **.*

362. spacer 29.82|7097897|37|NZ_CP012159|PILER-CR matches to NZ_CP022789 (Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.73

ggattcggggcgcgccgagcggcggcaccacgggacg	CRISPR spacer
aggtcttctgcgcgccgagcggcggcacgacgcgatg	Protospacer
.*.*..   ******************* *** **.*

363. spacer 29.82|7097897|37|NZ_CP012159|PILER-CR matches to NZ_CP022771 (Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.73

ggattcggggcgcgccgagcggcggcaccacgggacg	CRISPR spacer
aggtcttctgcgcgccgagcggcggcacgacgcgatg	Protospacer
.*.*..   ******************* *** **.*

364. spacer 29.82|7097897|37|NZ_CP012159|PILER-CR matches to NZ_CP022777 (Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.73

ggattcggggcgcgccgagcggcggcaccacgggacg	CRISPR spacer
aggtcttctgcgcgccgagcggcggcacgacgcgatg	Protospacer
.*.*..   ******************* *** **.*

365. spacer 29.82|7097897|37|NZ_CP012159|PILER-CR matches to NZ_CP022799 (Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.73

ggattcggggcgcgccgagcggcggcaccacgggacg	CRISPR spacer
aggtcttctgcgcgccgagcggcggcacgacgcgatg	Protospacer
.*.*..   ******************* *** **.*

366. spacer 29.82|7097897|37|NZ_CP012159|PILER-CR matches to NZ_CP022764 (Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.73

ggattcggggcgcgccgagcggcggcaccacgggacg	CRISPR spacer
aggtcttctgcgcgccgagcggcggcacgacgcgatg	Protospacer
.*.*..   ******************* *** **.*

367. spacer 29.82|7097897|37|NZ_CP012159|PILER-CR matches to NZ_CP022797 (Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.73

ggattcggggcgcgccgagcggcggcaccacgggacg	CRISPR spacer
aggtcttctgcgcgccgagcggcggcacgacgcgatg	Protospacer
.*.*..   ******************* *** **.*

368. spacer 29.82|7097897|37|NZ_CP012159|PILER-CR matches to NZ_CP022758 (Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.73

ggattcggggcgcgccgagcggcggcaccacgggacg	CRISPR spacer
aggtcttctgcgcgccgagcggcggcacgacgcgatg	Protospacer
.*.*..   ******************* *** **.*

369. spacer 30.51|7112821|37|NZ_CP012159|CRISPRCasFinder,CRT,PILER-CR matches to MH617365 (Microviridae sp. isolate ctbe193, complete genome) position: , mismatch: 10, identity: 0.73

aggcgaaggtgacgccagtgccagggacggcgtagga	CRISPR spacer
ggagaacgaagacgccagtcccagggacggcgaaggc	Protospacer
.*. .* *. ********* ************ ***

370. spacer 30.75|7109524|33|NZ_CP012159|PILER-CR matches to NZ_CP017943 (Phyllobacterium zundukense strain Tri-48 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.697

accagcaggatcggcctcgtgcagccgctgcat	CRISPR spacer
gacgttgatatctgcctcatgcagccgctgcat	Protospacer
. *. ... *** *****.**************

371. spacer 30.75|7109524|33|NZ_CP012159|PILER-CR matches to NZ_CP038638 (Cupriavidus oxalaticus strain X32 plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.697

accagcaggatcggcctcgtgcagccgctgcat	CRISPR spacer
gcccgcaggatcggcctcgcgcagcaagtcgtc	Protospacer
.** ***************.***** . *   .

372. spacer 35.3|7819947|35|NZ_CP012159|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022775 (Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.714

aacaccgtctggtcgacgatggcgtcgtacaaggg	CRISPR spacer
agcagcgtctggtcgacgatgccgtcgcctgcatg	Protospacer
*.** **************** *****. .. . *

373. spacer 35.3|7819947|35|NZ_CP012159|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022762 (Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.714

aacaccgtctggtcgacgatggcgtcgtacaaggg	CRISPR spacer
agcagcgtctggtcgacgatgccgtcgcctgcatg	Protospacer
*.** **************** *****. .. . *

374. spacer 35.3|7819947|35|NZ_CP012159|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023017 (Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.714

aacaccgtctggtcgacgatggcgtcgtacaaggg	CRISPR spacer
agcagcgtctggtcgacgatgccgtcgcctgcatg	Protospacer
*.** **************** *****. .. . *

375. spacer 35.3|7819947|35|NZ_CP012159|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014703 (Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence) position: , mismatch: 10, identity: 0.714

aacaccgtctggtcgacgatggcgtcgtacaaggg	CRISPR spacer
agcagcgtctggtcgacgatgccgtcgcctgcatg	Protospacer
*.** **************** *****. .. . *

376. spacer 35.3|7819947|35|NZ_CP012159|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022771 (Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.714

aacaccgtctggtcgacgatggcgtcgtacaaggg	CRISPR spacer
agcagcgtctggtcgacgatgccgtcgcctgcatg	Protospacer
*.** **************** *****. .. . *

377. spacer 35.3|7819947|35|NZ_CP012159|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022777 (Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.714

aacaccgtctggtcgacgatggcgtcgtacaaggg	CRISPR spacer
agcagcgtctggtcgacgatgccgtcgcctgcatg	Protospacer
*.** **************** *****. .. . *

378. spacer 35.3|7819947|35|NZ_CP012159|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022799 (Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.714

aacaccgtctggtcgacgatggcgtcgtacaaggg	CRISPR spacer
agcagcgtctggtcgacgatgccgtcgcctgcatg	Protospacer
*.** **************** *****. .. . *

379. spacer 35.3|7819947|35|NZ_CP012159|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022764 (Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.714

aacaccgtctggtcgacgatggcgtcgtacaaggg	CRISPR spacer
agcagcgtctggtcgacgatgccgtcgcctgcatg	Protospacer
*.** **************** *****. .. . *

380. spacer 35.3|7819947|35|NZ_CP012159|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022797 (Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.714

aacaccgtctggtcgacgatggcgtcgtacaaggg	CRISPR spacer
agcagcgtctggtcgacgatgccgtcgcctgcatg	Protospacer
*.** **************** *****. .. . *

381. spacer 35.3|7819947|35|NZ_CP012159|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022758 (Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.714

aacaccgtctggtcgacgatggcgtcgtacaaggg	CRISPR spacer
agcagcgtctggtcgacgatgccgtcgcctgcatg	Protospacer
*.** **************** *****. .. . *

382. spacer 35.4|7820019|34|NZ_CP012159|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039965 (Pseudorhodobacter sp. S12M18 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.706

cactcacccgtgtggatcgtggtcacgatggcgg	CRISPR spacer
ccggtatagctgtggatcgtggtcatgatgccgg	Protospacer
*   .*.   ***************.**** ***

383. spacer 36.1|7912333|36|NZ_CP012159|CRISPRCasFinder matches to NZ_CP020716 (Cnuibacter physcomitrellae strain XA(T) plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.722

cccggccatcgcgaccgacacccccggccatcgcaa	CRISPR spacer
tgcgggcatcgcgaccgacacccgcggcttcatcat	Protospacer
. *** ***************** ****. .  **

384. spacer 17.1|4524046|35|NZ_CP012159|PILER-CR,CRISPRCasFinder,CRT matches to NC_009426 (Novosphingobium aromaticivorans DSM 12444 plasmid pNL1, complete sequence) position: , mismatch: 11, identity: 0.686

acgtgggccgcgcgagctggagacccgctcgagga	CRISPR spacer
catctcgtcgcgcgagcggtagacccgctcgagcg	Protospacer
   .  *.********* * ************* .

385. spacer 17.1|4524046|35|NZ_CP012159|PILER-CR,CRISPRCasFinder,CRT matches to NC_002033 (Novosphingobium aromaticivorans plasmid pNL1, complete sequence) position: , mismatch: 11, identity: 0.686

acgtgggccgcgcgagctggagacccgctcgagga	CRISPR spacer
catctcgtcgcgcgagcggtagacccgctcgagcg	Protospacer
   .  *.********* * ************* .

386. spacer 29.16|7096753|37|NZ_CP012159|CRISPRCasFinder,CRT matches to NZ_CP026091 (Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.703

gcttcccgcccgtgctggggttcaccattaccgtctt	CRISPR spacer
tcttcgcgccggtgctggggttcaccagcatcacgaa	Protospacer
 **** **** **************** .*.*..

387. spacer 29.16|7096753|37|NZ_CP012159|CRISPRCasFinder,CRT matches to NC_014309 (Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome) position: , mismatch: 11, identity: 0.703

gcttcccgcccgtgctggggttcaccattaccgtctt	CRISPR spacer
tcttcgcgccggtgctggggttcaccagcatcacgaa	Protospacer
 **** **** **************** .*.*..

388. spacer 29.16|7096753|37|NZ_CP012159|CRISPRCasFinder,CRT matches to NZ_CP021653 (Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.703

gcttcccgcccgtgctggggttcaccattaccgtctt	CRISPR spacer
tcttcgcgccggtgctggggttcaccagcatcacgaa	Protospacer
 **** **** **************** .*.*..

389. spacer 29.16|7096753|37|NZ_CP012159|CRISPRCasFinder,CRT matches to NZ_CP026093 (Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.703

gcttcccgcccgtgctggggttcaccattaccgtctt	CRISPR spacer
tcttcgcgccggtgctggggttcaccagcatcacgaa	Protospacer
 **** **** **************** .*.*..

390. spacer 29.16|7096753|37|NZ_CP012159|CRISPRCasFinder,CRT matches to NZ_CP021767 (Ralstonia solanacearum strain RS 489 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.703

gcttcccgcccgtgctggggttcaccattaccgtctt	CRISPR spacer
tcttcgcgccggtgctggggttcaccagcatcacgaa	Protospacer
 **** **** **************** .*.*..

391. spacer 29.16|7096753|37|NZ_CP012159|CRISPRCasFinder,CRT matches to NZ_CP012940 (Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.703

gcttcccgcccgtgctggggttcaccattaccgtctt	CRISPR spacer
tcttcgcgccggtgctggggttcaccagcatcacgaa	Protospacer
 **** **** **************** .*.*..

392. spacer 29.16|7096753|37|NZ_CP012159|CRISPRCasFinder,CRT matches to NZ_CP012944 (Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.703

gcttcccgcccgtgctggggttcaccattaccgtctt	CRISPR spacer
tcttcgcgccggtgctggggttcaccagcatcacgaa	Protospacer
 **** **** **************** .*.*..

393. spacer 29.16|7096753|37|NZ_CP012159|CRISPRCasFinder,CRT matches to NZ_CP012688 (Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.703

gcttcccgcccgtgctggggttcaccattaccgtctt	CRISPR spacer
tcttcgcgccggtgctggggttcaccagcatcacgaa	Protospacer
 **** **** **************** .*.*..

394. spacer 29.16|7096753|37|NZ_CP012159|CRISPRCasFinder,CRT matches to NC_017575 (Ralstonia solanacearum Po82 megaplasmid, complete sequence) position: , mismatch: 11, identity: 0.703

gcttcccgcccgtgctggggttcaccattaccgtctt	CRISPR spacer
tcttcgcgccggtgctggggttcaccagcatcacgaa	Protospacer
 **** **** **************** .*.*..

395. spacer 29.16|7096753|37|NZ_CP012159|CRISPRCasFinder,CRT matches to NZ_CP026308 (Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.703

gcttcccgcccgtgctggggttcaccattaccgtctt	CRISPR spacer
tcttcgcgccggtgctggggttcaccagcatcacgaa	Protospacer
 **** **** **************** .*.*..

396. spacer 29.16|7096753|37|NZ_CP012159|CRISPRCasFinder,CRT matches to CP047139 (Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.703

gcttcccgcccgtgctggggttcaccattaccgtctt	CRISPR spacer
tcttcgcgccggtgctggggttcaccagcatcacgaa	Protospacer
 **** **** **************** .*.*..

397. spacer 29.16|7096753|37|NZ_CP012159|CRISPRCasFinder,CRT matches to NZ_CP051295 (Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence) position: , mismatch: 11, identity: 0.703

gcttcccgcccgtgctggggttcaccattaccgtctt	CRISPR spacer
tcttcgcgccggtgctggggttcaccagcatcacgaa	Protospacer
 **** **** **************** .*.*..

398. spacer 29.16|7096753|37|NZ_CP012159|CRISPRCasFinder,CRT matches to CP047137 (Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.703

gcttcccgcccgtgctggggttcaccattaccgtctt	CRISPR spacer
tcttcgcgccggtgctggggttcaccagcatcacgaa	Protospacer
 **** **** **************** .*.*..

399. spacer 29.27|7097535|34|NZ_CP012159|CRISPRCasFinder,CRT matches to NC_013449 (Streptomyces sp. W9 plasmid pCQ3, complete sequence) position: , mismatch: 11, identity: 0.676

cagacgcgctcctcgctggcgtcgccgcactccc	CRISPR spacer
gtcgcgcgctcctcgctggcctcggcgccaccgg	Protospacer
   .**************** *** ***  .*

400. spacer 29.66|7096754|37|NZ_CP012159|PILER-CR matches to NZ_CP026091 (Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.703

gcttcccgcccgtgctggggttcaccattaccgtctt	CRISPR spacer
tcttcgcgccggtgctggggttcaccagcatcacgaa	Protospacer
 **** **** **************** .*.*..

401. spacer 29.66|7096754|37|NZ_CP012159|PILER-CR matches to NC_014309 (Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome) position: , mismatch: 11, identity: 0.703

gcttcccgcccgtgctggggttcaccattaccgtctt	CRISPR spacer
tcttcgcgccggtgctggggttcaccagcatcacgaa	Protospacer
 **** **** **************** .*.*..

402. spacer 29.66|7096754|37|NZ_CP012159|PILER-CR matches to NZ_CP021653 (Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.703

gcttcccgcccgtgctggggttcaccattaccgtctt	CRISPR spacer
tcttcgcgccggtgctggggttcaccagcatcacgaa	Protospacer
 **** **** **************** .*.*..

403. spacer 29.66|7096754|37|NZ_CP012159|PILER-CR matches to NZ_CP026093 (Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.703

gcttcccgcccgtgctggggttcaccattaccgtctt	CRISPR spacer
tcttcgcgccggtgctggggttcaccagcatcacgaa	Protospacer
 **** **** **************** .*.*..

404. spacer 29.66|7096754|37|NZ_CP012159|PILER-CR matches to NZ_CP021767 (Ralstonia solanacearum strain RS 489 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.703

gcttcccgcccgtgctggggttcaccattaccgtctt	CRISPR spacer
tcttcgcgccggtgctggggttcaccagcatcacgaa	Protospacer
 **** **** **************** .*.*..

405. spacer 29.66|7096754|37|NZ_CP012159|PILER-CR matches to NZ_CP012940 (Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.703

gcttcccgcccgtgctggggttcaccattaccgtctt	CRISPR spacer
tcttcgcgccggtgctggggttcaccagcatcacgaa	Protospacer
 **** **** **************** .*.*..

406. spacer 29.66|7096754|37|NZ_CP012159|PILER-CR matches to NZ_CP012944 (Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.703

gcttcccgcccgtgctggggttcaccattaccgtctt	CRISPR spacer
tcttcgcgccggtgctggggttcaccagcatcacgaa	Protospacer
 **** **** **************** .*.*..

407. spacer 29.66|7096754|37|NZ_CP012159|PILER-CR matches to NZ_CP012688 (Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.703

gcttcccgcccgtgctggggttcaccattaccgtctt	CRISPR spacer
tcttcgcgccggtgctggggttcaccagcatcacgaa	Protospacer
 **** **** **************** .*.*..

408. spacer 29.66|7096754|37|NZ_CP012159|PILER-CR matches to NC_017575 (Ralstonia solanacearum Po82 megaplasmid, complete sequence) position: , mismatch: 11, identity: 0.703

gcttcccgcccgtgctggggttcaccattaccgtctt	CRISPR spacer
tcttcgcgccggtgctggggttcaccagcatcacgaa	Protospacer
 **** **** **************** .*.*..

409. spacer 29.66|7096754|37|NZ_CP012159|PILER-CR matches to NZ_CP026308 (Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.703

gcttcccgcccgtgctggggttcaccattaccgtctt	CRISPR spacer
tcttcgcgccggtgctggggttcaccagcatcacgaa	Protospacer
 **** **** **************** .*.*..

410. spacer 29.66|7096754|37|NZ_CP012159|PILER-CR matches to CP047139 (Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.703

gcttcccgcccgtgctggggttcaccattaccgtctt	CRISPR spacer
tcttcgcgccggtgctggggttcaccagcatcacgaa	Protospacer
 **** **** **************** .*.*..

411. spacer 29.66|7096754|37|NZ_CP012159|PILER-CR matches to NZ_CP051295 (Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence) position: , mismatch: 11, identity: 0.703

gcttcccgcccgtgctggggttcaccattaccgtctt	CRISPR spacer
tcttcgcgccggtgctggggttcaccagcatcacgaa	Protospacer
 **** **** **************** .*.*..

412. spacer 29.66|7096754|37|NZ_CP012159|PILER-CR matches to CP047137 (Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.703

gcttcccgcccgtgctggggttcaccattaccgtctt	CRISPR spacer
tcttcgcgccggtgctggggttcaccagcatcacgaa	Protospacer
 **** **** **************** .*.*..

413. spacer 29.77|7097536|34|NZ_CP012159|PILER-CR matches to NC_013449 (Streptomyces sp. W9 plasmid pCQ3, complete sequence) position: , mismatch: 11, identity: 0.676

cagacgcgctcctcgctggcgtcgccgcactccc	CRISPR spacer
gtcgcgcgctcctcgctggcctcggcgccaccgg	Protospacer
   .**************** *** ***  .*

414. spacer 30.8|7109725|36|NZ_CP012159|CRISPRCasFinder,CRT matches to CP000662 (Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01, complete sequence) position: , mismatch: 11, identity: 0.694

cttctcggtggctgcgggcctcgaccgcttcgccgc	CRISPR spacer
tgaggaagtggctgcgggcgtcgaccgcttggcgga	Protospacer
.     .************ ********** ** *

415. spacer 30.16|7110295|35|NZ_CP012159|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025513 (Neorhizobium sp. SOG26 plasmid unnamed2, complete sequence) position: , mismatch: 11, identity: 0.686

agcgtctcgagggtggcgtaggcggcggtggcgtc	CRISPR spacer
gtcgtctcggtggtggcgtaggcggcgatataagg	Protospacer
. *******. ****************.*.  .

416. spacer 30.16|7110295|35|NZ_CP012159|CRISPRCasFinder,CRT,PILER-CR matches to NC_011273 (Mycobacterium phage Myrna, complete genome) position: , mismatch: 11, identity: 0.686

agcgtctcgagggtggcgtaggcggcggtggcgtc	CRISPR spacer
ccgacgacgagggtggcgaaggcggcggcggcatg	Protospacer
   ..  *********** *********.***.*

417. spacer 39.1|9159483|34|NZ_CP012159|CRISPRCasFinder matches to NZ_CP050104 (Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b2, complete sequence) position: , mismatch: 11, identity: 0.676

gggatacgcccgcgggcgcgcctgcctctgaggc	CRISPR spacer
tcttgacgcccgcggccgcggctgcctcttcgaa	Protospacer
     ********** **** ********  *.

418. spacer 39.1|9159483|34|NZ_CP012159|CRISPRCasFinder matches to NZ_CP025507 (Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvA, complete sequence) position: , mismatch: 11, identity: 0.676

gggatacgcccgcgggcgcgcctgcctctgaggc	CRISPR spacer
tcttgacgcccgcggccgcggctgcctcttcgaa	Protospacer
     ********** **** ********  *.

419. spacer 39.1|9159483|34|NZ_CP012159|CRISPRCasFinder matches to NZ_CP050109 (Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b2, complete sequence) position: , mismatch: 11, identity: 0.676

gggatacgcccgcgggcgcgcctgcctctgaggc	CRISPR spacer
tcttgacgcccgcggccgcggctgcctcttcgaa	Protospacer
     ********** **** ********  *.

420. spacer 39.1|9159483|34|NZ_CP012159|CRISPRCasFinder matches to NZ_CP050086 (Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b7, complete sequence) position: , mismatch: 11, identity: 0.676

gggatacgcccgcgggcgcgcctgcctctgaggc	CRISPR spacer
tcttgacgcccgcggccgcggctgcctcttcgaa	Protospacer
     ********** **** ********  *.

421. spacer 35.1|7819805|34|NZ_CP012159|PILER-CR,CRISPRCasFinder,CRT matches to NC_014459 (Mycobacterium virus CrimD, complete genome) position: , mismatch: 12, identity: 0.647

caagtgacgccgtagtcgtcgtcgtgtcgcgtca	CRISPR spacer
tcgtgagcgccgtcgtcgccgtcgtgtcgcgcac	Protospacer
. .  ..****** ****.************.

422. spacer 29.39|7098399|37|NZ_CP012159|CRISPRCasFinder,CRT matches to NZ_CP013379 (Burkholderia pseudomultivorans strain SUB-INT23-BP2 plasmid pINT23, complete sequence) position: , mismatch: 21, identity: 0.432

--------------gcgcgcggcgccgagctgctcgccgttgctgtctgtt	CRISPR spacer
atacgccgtagacggcgagcagcgcggcgccgagcgc--------------	Protospacer
              *** **.**** * **.*  ***

423. spacer 29.39|7098399|37|NZ_CP012159|CRISPRCasFinder,CRT matches to NZ_CP023519 (Burkholderia cepacia strain FDAARGOS_388 plasmid unnamed1, complete sequence) position: , mismatch: 21, identity: 0.432

--------------gcgcgcggcgccgagctgctcgccgttgctgtctgtt	CRISPR spacer
acacgccgtacacggcgagcagcgcggcgccgagcgc--------------	Protospacer
              *** **.**** * **.*  ***

424. spacer 29.39|7098399|37|NZ_CP012159|CRISPRCasFinder,CRT matches to NZ_CP007745 (Burkholderia cepacia ATCC 25416 plasmid unnamed, complete sequence) position: , mismatch: 21, identity: 0.432

--------------gcgcgcggcgccgagctgctcgccgttgctgtctgtt	CRISPR spacer
acacgccgtacacggcgagcagcgcggcgccgagcgc--------------	Protospacer
              *** **.**** * **.*  ***

425. spacer 29.39|7098399|37|NZ_CP012159|CRISPRCasFinder,CRT matches to NZ_CP028965 (Burkholderia sp. IDO3 plasmid p1, complete sequence) position: , mismatch: 21, identity: 0.432

--------------gcgcgcggcgccgagctgctcgccgttgctgtctgtt	CRISPR spacer
acacgccgtagacggcgagcagcgcggcgccgagcgc--------------	Protospacer
              *** **.**** * **.*  ***

426. spacer 29.89|7098400|37|NZ_CP012159|PILER-CR matches to NZ_CP013379 (Burkholderia pseudomultivorans strain SUB-INT23-BP2 plasmid pINT23, complete sequence) position: , mismatch: 21, identity: 0.432

--------------gcgcgcggcgccgagctgctcgccgttgctgtctgtt	CRISPR spacer
atacgccgtagacggcgagcagcgcggcgccgagcgc--------------	Protospacer
              *** **.**** * **.*  ***

427. spacer 29.89|7098400|37|NZ_CP012159|PILER-CR matches to NZ_CP023519 (Burkholderia cepacia strain FDAARGOS_388 plasmid unnamed1, complete sequence) position: , mismatch: 21, identity: 0.432

--------------gcgcgcggcgccgagctgctcgccgttgctgtctgtt	CRISPR spacer
acacgccgtacacggcgagcagcgcggcgccgagcgc--------------	Protospacer
              *** **.**** * **.*  ***

428. spacer 29.89|7098400|37|NZ_CP012159|PILER-CR matches to NZ_CP007745 (Burkholderia cepacia ATCC 25416 plasmid unnamed, complete sequence) position: , mismatch: 21, identity: 0.432

--------------gcgcgcggcgccgagctgctcgccgttgctgtctgtt	CRISPR spacer
acacgccgtacacggcgagcagcgcggcgccgagcgc--------------	Protospacer
              *** **.**** * **.*  ***

429. spacer 29.89|7098400|37|NZ_CP012159|PILER-CR matches to NZ_CP028965 (Burkholderia sp. IDO3 plasmid p1, complete sequence) position: , mismatch: 21, identity: 0.432

--------------gcgcgcggcgccgagctgctcgccgttgctgtctgtt	CRISPR spacer
acacgccgtagacggcgagcagcgcggcgccgagcgc--------------	Protospacer
              *** **.**** * **.*  ***

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP012159

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CRISPR-Cas detection and classification

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Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information