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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_LT904878 Salmonella enterica subsp. enterica serovar Typhi strain ty3-193 genome assembly, chromosome: 1 2 crisprs PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,RT,DEDDh,cas3,DinG,c2c9_V-U4 0 3 13 0
NZ_LT904880 Salmonella enterica subsp. enterica serovar Typhi strain ty3-193 genome assembly, plasmid: 3 0 crisprs DEDDh 0 0 1 0
NZ_LT904879 Salmonella enterica subsp. enterica serovar Typhi strain ty3-193 genome assembly, plasmid: 2 1 crisprs csa3 0 2 1 0

Results visualization

1. NZ_LT904879
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LT904879_1 81456-81613 Orphan NA
2 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_LT904879_1 1.1|81476|51|NZ_LT904879|PILER-CR 81476-81526 51 NZ_LT904879 Salmonella enterica subsp. enterica serovar Typhi strain ty3-193 genome assembly, plasmid: 2 81476-81526 0 1.0
NZ_LT904879_1 1.1|81476|51|NZ_LT904879|PILER-CR 81476-81526 51 NZ_KX129784 Escherichia coli strain H226B plasmid pH226B, complete sequence 182983-183033 0 1.0
NZ_LT904879_1 1.1|81476|51|NZ_LT904879|PILER-CR 81476-81526 51 NC_009981 Salmonella enterica subsp. enterica serovar Choleraesuis plasmid pMAK1, complete sequence 180762-180812 0 1.0
NZ_LT904879_1 1.1|81476|51|NZ_LT904879|PILER-CR 81476-81526 51 NZ_CP029645 Salmonella enterica subsp. enterica serovar Typhi strain 311189_217186 plasmid pHCM1, complete sequence 27631-27681 0 1.0
NZ_LT904879_1 1.1|81476|51|NZ_LT904879|PILER-CR 81476-81526 51 NZ_CP029729 Citrobacter sp. CRE-46 strain AR_0157 plasmid unnamed1, complete sequence 96276-96326 0 1.0
NZ_LT904879_1 1.1|81476|51|NZ_LT904879|PILER-CR 81476-81526 51 NZ_CP053721 Escherichia coli strain CP131_Sichuan plasmid pCP131-IncHI1, complete sequence 235796-235846 0 1.0
NZ_LT904879_1 1.1|81476|51|NZ_LT904879|PILER-CR 81476-81526 51 NZ_CP026790 Shigella flexneri 2a strain ATCC 29903 plasmid unnamed2, complete sequence 42635-42685 0 1.0
NZ_LT904879_1 1.1|81476|51|NZ_LT904879|PILER-CR 81476-81526 51 NZ_CP039717 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS000211 plasmid p10-3184.1, complete sequence 152742-152792 0 1.0
NZ_LT904879_1 1.1|81476|51|NZ_LT904879|PILER-CR 81476-81526 51 KP899804 Salmonella enterica strain F8475 plasmid pF8475, complete sequence 142863-142913 0 1.0
NZ_LT904879_1 1.1|81476|51|NZ_LT904879|PILER-CR 81476-81526 51 KP899805 Salmonella enterica strain 109/9 plasmid p109/9, complete sequence 133710-133760 0 1.0
NZ_LT904879_1 1.1|81476|51|NZ_LT904879|PILER-CR 81476-81526 51 KP899806 Salmonella enterica strain B71 plasmid pB71, complete sequence 117174-117224 0 1.0
NZ_LT904879_1 1.1|81476|51|NZ_LT904879|PILER-CR 81476-81526 51 NZ_CP037875 Salmonella enterica subsp. enterica serovar 4,[5],12:i:- strain PNCS015054 plasmid pPNCS015054_S2, complete sequence 192529-192579 0 1.0
NZ_LT904879_1 1.1|81476|51|NZ_LT904879|PILER-CR 81476-81526 51 NZ_CP018652 Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1705 plasmid pSE81-1705-1, complete sequence 11544-11594 0 1.0
NZ_LT904879_1 1.1|81476|51|NZ_LT904879|PILER-CR 81476-81526 51 MN232190 Escherichia coli plasmid pGD27-31, complete sequence 77135-77185 0 1.0
NZ_LT904879_1 1.1|81476|51|NZ_LT904879|PILER-CR 81476-81526 51 NZ_CP044299 Escherichia coli strain P59A plasmid pP59A-CTX-M-55, complete sequence 247816-247866 0 1.0
NZ_LT904879_1 1.1|81476|51|NZ_LT904879|PILER-CR 81476-81526 51 NZ_CP029690 Escherichia coli strain SD134209 plasmid pSD134209-1, complete sequence 175824-175874 0 1.0
NZ_LT904879_1 1.1|81476|51|NZ_LT904879|PILER-CR 81476-81526 51 NC_003384 Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid pHCM1, complete sequence 29608-29658 0 1.0
NZ_LT904879_1 1.1|81476|51|NZ_LT904879|PILER-CR 81476-81526 51 NZ_CP030182 Salmonella enterica strain SA20030575 plasmid pSA20030575.1, complete sequence 195030-195080 0 1.0
NZ_LT904879_1 1.1|81476|51|NZ_LT904879|PILER-CR 81476-81526 51 NZ_CP049354 Escherichia coli strain T28R plasmid pT28R-1, complete sequence 160405-160455 0 1.0
NZ_LT904879_1 1.1|81476|51|NZ_LT904879|PILER-CR 81476-81526 51 NZ_CP023167 Salmonella enterica subsp. enterica serovar Saintpaul strain SGB23 plasmid pSGB23, complete sequence 229056-229106 0 1.0
NZ_LT904879_1 1.1|81476|51|NZ_LT904879|PILER-CR 81476-81526 51 AP020333 Salmonella enterica SESen3709 plasmid pSESen3709_1 DNA, complete genome 1240-1290 0 1.0
NZ_LT904879_1 1.1|81476|51|NZ_LT904879|PILER-CR 81476-81526 51 NZ_CP039559 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014846 plasmid p08-4425.1, complete sequence 150895-150945 0 1.0
NZ_LT904879_1 1.1|81476|51|NZ_LT904879|PILER-CR 81476-81526 51 NZ_CP037911 Escherichia coli strain YSP8-1 plasmid pYSP8-1, complete sequence 222888-222938 0 1.0
NZ_LT904879_1 1.1|81476|51|NZ_LT904879|PILER-CR 81476-81526 51 NZ_CP046717 Escherichia coli strain T16R plasmid pT16R-1, complete sequence 157698-157748 0 1.0
NZ_LT904879_1 1.1|81476|51|NZ_LT904879|PILER-CR 81476-81526 51 MN256758 Escherichia coli strain 4M8F plasmid p4M8F, complete sequence 163625-163675 0 1.0
NZ_LT904879_1 1.1|81476|51|NZ_LT904879|PILER-CR 81476-81526 51 MN256759 Escherichia coli strain 4M9F plasmid p4M9F, complete sequence 139403-139453 0 1.0
NZ_LT904879_1 1.1|81476|51|NZ_LT904879|PILER-CR 81476-81526 51 NZ_CP046007 Escherichia coli strain 1919D62 plasmid p1919D62-1, complete sequence 103197-103247 0 1.0
NZ_LT904879_1 1.1|81476|51|NZ_LT904879|PILER-CR 81476-81526 51 NC_002305 Salmonella typhi plasmid R27, complete sequence 54047-54097 0 1.0
NZ_LT904879_1 1.1|81476|51|NZ_LT904879|PILER-CR 81476-81526 51 NZ_CP046004 Escherichia coli strain 1919D3 plasmid p1919D3-1, complete sequence 156262-156312 0 1.0
NZ_LT904879_1 1.1|81476|51|NZ_LT904879|PILER-CR 81476-81526 51 NZ_CP024236 Escherichia coli O6:H16 strain 2014EL-1346-6 plasmid unnamed4, complete sequence 114948-114998 0 1.0
NZ_LT904879_1 1.1|81476|51|NZ_LT904879|PILER-CR 81476-81526 51 NZ_CP029895 Salmonella enterica subsp. enterica serovar Typhi strain 311189_252186 plasmid pHCM1, complete sequence 27631-27681 0 1.0
NZ_LT904879_1 1.1|81476|51|NZ_LT904879|PILER-CR 81476-81526 51 NZ_CP029877 Salmonella enterica subsp. enterica serovar Typhi strain 311189_224186 plasmid pHCM1, complete sequence 27631-27681 0 1.0
NZ_LT904879_1 1.1|81476|51|NZ_LT904879|PILER-CR 81476-81526 51 NZ_CP033094 Escherichia coli strain CP53 plasmid pCP53-mcr, complete sequence 99282-99332 0 1.0
NZ_LT904879_1 1.1|81476|51|NZ_LT904879|PILER-CR 81476-81526 51 LT905061 Salmonella enterica subsp. enterica serovar Typhi isolate ISP_03_07467_SGB110-sc-1979083 genome assembly, plasmid: 2 190141-190191 0 1.0
NZ_LT904879_1 1.1|81476|51|NZ_LT904879|PILER-CR 81476-81526 51 NZ_CP029926 Salmonella enterica subsp. enterica serovar Typhi strain 311189_218186 plasmid pHCM1, complete sequence 186842-186892 0 1.0
NZ_LT904879_1 1.1|81476|51|NZ_LT904879|PILER-CR 81476-81526 51 NZ_CP029947 Salmonella enterica subsp. enterica serovar Typhi strain 311189_210186 plasmid pHCM1, complete sequence 27631-27681 0 1.0
NZ_LT904879_1 1.1|81476|51|NZ_LT904879|PILER-CR 81476-81526 51 NZ_CP044968 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007098 plasmid pPNCS014881.1, complete sequence 163174-163224 0 1.0
NZ_LT904879_1 1.1|81476|51|NZ_LT904879|PILER-CR 81476-81526 51 NZ_CP044958 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007087 plasmid pPNCS007087.1, complete sequence 95412-95462 0 1.0
NZ_LT904879_1 1.1|81476|51|NZ_LT904879|PILER-CR 81476-81526 51 NZ_CP029943 Salmonella enterica subsp. enterica serovar Typhi strain 311189_212186 plasmid pHCM1, complete sequence 27631-27681 0 1.0
NZ_LT904879_1 1.1|81476|51|NZ_LT904879|PILER-CR 81476-81526 51 NZ_CP029953 Salmonella enterica subsp. enterica serovar Typhi strain 311189_204186 plasmid pHCM1, complete sequence 27631-27681 0 1.0
NZ_LT904879_1 1.1|81476|51|NZ_LT904879|PILER-CR 81476-81526 51 NZ_CP029955 Salmonella enterica subsp. enterica serovar Typhi strain 311189_202186 plasmid pHCM1, complete sequence 27631-27681 0 1.0
NZ_LT904879_1 1.1|81476|51|NZ_LT904879|PILER-CR 81476-81526 51 NZ_CP022495 Salmonella enterica subsp. enterica serovar Derby strain SA20035215 plasmid unnamed1, complete sequence 154888-154938 0 1.0
NZ_LT904879_1 1.1|81476|51|NZ_LT904879|PILER-CR 81476-81526 51 NZ_CP016184 Escherichia coli strain EC2 plasmid pEC2-4, complete sequence 135342-135392 0 1.0
NZ_LT904879_1 1.1|81476|51|NZ_LT904879|PILER-CR 81476-81526 51 NZ_CP016183 Escherichia coli strain EC2_1 plasmid pEC2_1-4, complete sequence 101555-101605 0 1.0
NZ_LT904879_1 1.1|81476|51|NZ_LT904879|PILER-CR 81476-81526 51 NZ_CP029924 Salmonella enterica subsp. enterica serovar Typhi strain 311189_221186 plasmid pHCM1, complete sequence 111577-111627 0 1.0
NZ_LT904879_1 1.1|81476|51|NZ_LT904879|PILER-CR 81476-81526 51 NZ_CP029934 Salmonella enterica subsp. enterica serovar Typhi strain 311189_214186 plasmid pHCM1, complete sequence 27631-27681 0 1.0
NZ_LT904879_1 1.1|81476|51|NZ_LT904879|PILER-CR 81476-81526 51 MN256757 Escherichia coli strain 4M18F plasmid p4M18F, complete sequence 163625-163675 0 1.0
NZ_LT904879_1 1.1|81476|51|NZ_LT904879|PILER-CR 81476-81526 51 NC_013365 Escherichia coli O111:H- str. 11128 plasmid pO111_1, complete sequence 192086-192136 0 1.0
NZ_LT904879_1 1.1|81476|51|NZ_LT904879|PILER-CR 81476-81526 51 NZ_CP041449 Escherichia coli strain YPE10 plasmid pYPE10-190k-tetX4, complete sequence 157699-157749 0 1.0
NZ_LT904879_1 1.1|81476|51|NZ_LT904879|PILER-CR 81476-81526 51 NZ_CP029939 Salmonella enterica subsp. enterica serovar Typhi strain 311189_206186 plasmid pHCM1, complete sequence 27631-27681 0 1.0
NZ_LT904879_1 1.1|81476|51|NZ_LT904879|PILER-CR 81476-81526 51 NZ_CP029957 Salmonella enterica subsp. enterica serovar Typhi strain 311189_201186 plasmid pHCM1, complete sequence 27631-27681 0 1.0
NZ_LT904879_1 1.1|81476|51|NZ_LT904879|PILER-CR 81476-81526 51 NZ_CP029941 Salmonella enterica subsp. enterica serovar Typhi strain 311189_203186 plasmid pHCM1, complete sequence 27631-27681 0 1.0
NZ_LT904879_1 1.1|81476|51|NZ_LT904879|PILER-CR 81476-81526 51 NZ_CP029910 Salmonella enterica subsp. enterica serovar Typhi strain 311189_219186 plasmid pHCM1, complete sequence 27631-27681 0 1.0
NZ_LT904879_1 1.1|81476|51|NZ_LT904879|PILER-CR 81476-81526 51 NZ_CP029887 Salmonella enterica subsp. enterica serovar Typhi strain 311189_220186 plasmid pHCM1, complete sequence 27631-27681 0 1.0
NZ_LT904879_1 1.1|81476|51|NZ_LT904879|PILER-CR 81476-81526 51 NZ_CP029948 Salmonella enterica subsp. enterica serovar Typhi strain 311189_208186 plasmid pHCM1, complete sequence 27631-27681 0 1.0
NZ_LT904879_1 1.1|81476|51|NZ_LT904879|PILER-CR 81476-81526 51 NZ_CP029937 Salmonella enterica subsp. enterica serovar Typhi strain 311189_207186 plasmid pHCM1, complete sequence 27631-27681 0 1.0
NZ_LT904879_1 1.1|81476|51|NZ_LT904879|PILER-CR 81476-81526 51 NZ_CP029879 Salmonella enterica subsp. enterica serovar Typhi strain 311189_223186 plasmid pHCM1, complete sequence 27631-27681 0 1.0
NZ_LT904879_1 1.1|81476|51|NZ_LT904879|PILER-CR 81476-81526 51 NZ_CP018656 Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1706 plasmid pSE81-1706, complete sequence 237889-237939 0 1.0
NZ_LT904879_1 1.1|81476|51|NZ_LT904879|PILER-CR 81476-81526 51 NC_016825 Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12 plasmid unnamed, complete sequence 79517-79567 0 1.0
NZ_LT904879_1 1.1|81476|51|NZ_LT904879|PILER-CR 81476-81526 51 NZ_CP029931 Salmonella enterica subsp. enterica serovar Typhi strain 311189_215186 plasmid pHCM1, complete sequence 27631-27681 0 1.0
NZ_LT904879_1 1.1|81476|51|NZ_LT904879|PILER-CR 81476-81526 51 NZ_CP029935 Salmonella enterica subsp. enterica serovar Typhi strain 311189_213186 plasmid pHCM1, complete sequence 27631-27681 0 1.0
NZ_LT904879_1 1.1|81476|51|NZ_LT904879|PILER-CR 81476-81526 51 NZ_LT985296 Escherichia coli strain 1454 plasmid RCS78_p, complete sequence 106159-106209 0 1.0
NZ_LT904879_1 1.1|81476|51|NZ_LT904879|PILER-CR 81476-81526 51 NZ_MN101858 Escherichia coli strain 2019XSD11-TC2 plasmid p2019XSD11-TC2-284, complete sequence 267735-267785 0 1.0
NZ_LT904879_1 1.1|81476|51|NZ_LT904879|PILER-CR 81476-81526 51 NZ_MN101856 Escherichia coli strain 2019XSD11 plasmid p2019XSD11-190, complete sequence 173816-173866 0 1.0
NZ_LT904879_1 1.1|81476|51|NZ_LT904879|PILER-CR 81476-81526 51 NZ_MH733010 Klebsiella pneumoniae strain KP14812 plasmid pKP14812-MCR-1, complete sequence 95376-95426 0 1.0
NZ_LT904879_1 1.1|81476|51|NZ_LT904879|PILER-CR 81476-81526 51 MT219825 Escherichia coli strain RW7-1 plasmid pRW7-1_235k_tetX, complete sequence 230101-230151 0 1.0
NZ_LT904879_1 1.1|81476|51|NZ_LT904879|PILER-CR 81476-81526 51 NZ_MG904992 Escherichia coli strain 14OD0056 plasmid p14ODMR, complete sequence 20571-20621 0 1.0
NZ_LT904879_1 1.1|81476|51|NZ_LT904879|PILER-CR 81476-81526 51 NZ_MG948335 Escherichia coli strain 3498 plasmid p3498, complete sequence 1141-1191 0 1.0
NZ_LT904879_1 1.1|81476|51|NZ_LT904879|PILER-CR 81476-81526 51 NC_023277 Escherichia coli strain 63743 plasmid pEQ2, complete sequence 259337-259387 0 1.0
NZ_LT904879_1 1.1|81476|51|NZ_LT904879|PILER-CR 81476-81526 51 NC_023289 Escherichia coli strain T23 plasmid pEQ1, complete sequence 210872-210922 0 1.0
NZ_LT904879_1 1.1|81476|51|NZ_LT904879|PILER-CR 81476-81526 51 MT219824 Escherichia coli strain RT18-1 plasmid pRT18-1_294k_tetX, complete sequence 110178-110228 0 1.0
NZ_LT904879_1 1.1|81476|51|NZ_LT904879|PILER-CR 81476-81526 51 MG874042 Salmonella sp. strain Sa4 plasmid pSa4-CIP, complete sequence 111658-111708 0 1.0
NZ_LT904879_1 1.2|81547|47|NZ_LT904879|PILER-CR 81547-81593 47 NZ_CP026790 Shigella flexneri 2a strain ATCC 29903 plasmid unnamed2, complete sequence 42568-42614 0 1.0
NZ_LT904879_1 1.2|81547|47|NZ_LT904879|PILER-CR 81547-81593 47 NZ_CP039717 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS000211 plasmid p10-3184.1, complete sequence 152675-152721 0 1.0
NZ_LT904879_1 1.2|81547|47|NZ_LT904879|PILER-CR 81547-81593 47 KP899804 Salmonella enterica strain F8475 plasmid pF8475, complete sequence 142796-142842 0 1.0
NZ_LT904879_1 1.2|81547|47|NZ_LT904879|PILER-CR 81547-81593 47 KP899805 Salmonella enterica strain 109/9 plasmid p109/9, complete sequence 133643-133689 0 1.0
NZ_LT904879_1 1.2|81547|47|NZ_LT904879|PILER-CR 81547-81593 47 KP899806 Salmonella enterica strain B71 plasmid pB71, complete sequence 117107-117153 0 1.0
NZ_LT904879_1 1.2|81547|47|NZ_LT904879|PILER-CR 81547-81593 47 NZ_CP037875 Salmonella enterica subsp. enterica serovar 4,[5],12:i:- strain PNCS015054 plasmid pPNCS015054_S2, complete sequence 192462-192508 0 1.0
NZ_LT904879_1 1.2|81547|47|NZ_LT904879|PILER-CR 81547-81593 47 NZ_CP018652 Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1705 plasmid pSE81-1705-1, complete sequence 11477-11523 0 1.0
NZ_LT904879_1 1.2|81547|47|NZ_LT904879|PILER-CR 81547-81593 47 NZ_CP039559 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014846 plasmid p08-4425.1, complete sequence 150828-150874 0 1.0
NZ_LT904879_1 1.2|81547|47|NZ_LT904879|PILER-CR 81547-81593 47 MN256758 Escherichia coli strain 4M8F plasmid p4M8F, complete sequence 163558-163604 0 1.0
NZ_LT904879_1 1.2|81547|47|NZ_LT904879|PILER-CR 81547-81593 47 MN256759 Escherichia coli strain 4M9F plasmid p4M9F, complete sequence 139336-139382 0 1.0
NZ_LT904879_1 1.2|81547|47|NZ_LT904879|PILER-CR 81547-81593 47 NZ_CP046007 Escherichia coli strain 1919D62 plasmid p1919D62-1, complete sequence 103130-103176 0 1.0
NZ_LT904879_1 1.2|81547|47|NZ_LT904879|PILER-CR 81547-81593 47 NC_002305 Salmonella typhi plasmid R27, complete sequence 53980-54026 0 1.0
NZ_LT904879_1 1.2|81547|47|NZ_LT904879|PILER-CR 81547-81593 47 LT905061 Salmonella enterica subsp. enterica serovar Typhi isolate ISP_03_07467_SGB110-sc-1979083 genome assembly, plasmid: 2 190074-190120 0 1.0
NZ_LT904879_1 1.2|81547|47|NZ_LT904879|PILER-CR 81547-81593 47 NZ_CP022495 Salmonella enterica subsp. enterica serovar Derby strain SA20035215 plasmid unnamed1, complete sequence 154821-154867 0 1.0
NZ_LT904879_1 1.2|81547|47|NZ_LT904879|PILER-CR 81547-81593 47 NZ_CP016184 Escherichia coli strain EC2 plasmid pEC2-4, complete sequence 135275-135321 0 1.0
NZ_LT904879_1 1.2|81547|47|NZ_LT904879|PILER-CR 81547-81593 47 NZ_CP016183 Escherichia coli strain EC2_1 plasmid pEC2_1-4, complete sequence 101488-101534 0 1.0
NZ_LT904879_1 1.2|81547|47|NZ_LT904879|PILER-CR 81547-81593 47 MN256757 Escherichia coli strain 4M18F plasmid p4M18F, complete sequence 163558-163604 0 1.0
NZ_LT904879_1 1.2|81547|47|NZ_LT904879|PILER-CR 81547-81593 47 NC_016825 Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12 plasmid unnamed, complete sequence 79450-79496 0 1.0
NZ_LT904879_1 1.2|81547|47|NZ_LT904879|PILER-CR 81547-81593 47 MT219825 Escherichia coli strain RW7-1 plasmid pRW7-1_235k_tetX, complete sequence 230034-230080 0 1.0
NZ_LT904879_1 1.2|81547|47|NZ_LT904879|PILER-CR 81547-81593 47 MT219824 Escherichia coli strain RT18-1 plasmid pRT18-1_294k_tetX, complete sequence 110111-110157 0 1.0
NZ_LT904879_1 1.2|81547|47|NZ_LT904879|PILER-CR 81547-81593 47 NZ_LT904879 Salmonella enterica subsp. enterica serovar Typhi strain ty3-193 genome assembly, plasmid: 2 81547-81593 0 1.0
NZ_LT904879_1 1.2|81547|47|NZ_LT904879|PILER-CR 81547-81593 47 NZ_KX129784 Escherichia coli strain H226B plasmid pH226B, complete sequence 183054-183100 0 1.0
NZ_LT904879_1 1.2|81547|47|NZ_LT904879|PILER-CR 81547-81593 47 NC_009981 Salmonella enterica subsp. enterica serovar Choleraesuis plasmid pMAK1, complete sequence 180833-180879 0 1.0
NZ_LT904879_1 1.2|81547|47|NZ_LT904879|PILER-CR 81547-81593 47 NZ_CP029645 Salmonella enterica subsp. enterica serovar Typhi strain 311189_217186 plasmid pHCM1, complete sequence 27702-27748 0 1.0
NZ_LT904879_1 1.2|81547|47|NZ_LT904879|PILER-CR 81547-81593 47 NZ_CP029729 Citrobacter sp. CRE-46 strain AR_0157 plasmid unnamed1, complete sequence 96347-96393 0 1.0
NZ_LT904879_1 1.2|81547|47|NZ_LT904879|PILER-CR 81547-81593 47 NZ_CP053721 Escherichia coli strain CP131_Sichuan plasmid pCP131-IncHI1, complete sequence 235867-235913 0 1.0
NZ_LT904879_1 1.2|81547|47|NZ_LT904879|PILER-CR 81547-81593 47 MN232190 Escherichia coli plasmid pGD27-31, complete sequence 77206-77252 0 1.0
NZ_LT904879_1 1.2|81547|47|NZ_LT904879|PILER-CR 81547-81593 47 NZ_CP044299 Escherichia coli strain P59A plasmid pP59A-CTX-M-55, complete sequence 247887-247933 0 1.0
NZ_LT904879_1 1.2|81547|47|NZ_LT904879|PILER-CR 81547-81593 47 NZ_CP029690 Escherichia coli strain SD134209 plasmid pSD134209-1, complete sequence 175895-175941 0 1.0
NZ_LT904879_1 1.2|81547|47|NZ_LT904879|PILER-CR 81547-81593 47 NC_003384 Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid pHCM1, complete sequence 29679-29725 0 1.0
NZ_LT904879_1 1.2|81547|47|NZ_LT904879|PILER-CR 81547-81593 47 NZ_CP030182 Salmonella enterica strain SA20030575 plasmid pSA20030575.1, complete sequence 195101-195147 0 1.0
NZ_LT904879_1 1.2|81547|47|NZ_LT904879|PILER-CR 81547-81593 47 NZ_CP049354 Escherichia coli strain T28R plasmid pT28R-1, complete sequence 160476-160522 0 1.0
NZ_LT904879_1 1.2|81547|47|NZ_LT904879|PILER-CR 81547-81593 47 NZ_CP023167 Salmonella enterica subsp. enterica serovar Saintpaul strain SGB23 plasmid pSGB23, complete sequence 229127-229173 0 1.0
NZ_LT904879_1 1.2|81547|47|NZ_LT904879|PILER-CR 81547-81593 47 AP020333 Salmonella enterica SESen3709 plasmid pSESen3709_1 DNA, complete genome 1311-1357 0 1.0
NZ_LT904879_1 1.2|81547|47|NZ_LT904879|PILER-CR 81547-81593 47 NZ_CP037911 Escherichia coli strain YSP8-1 plasmid pYSP8-1, complete sequence 222959-223005 0 1.0
NZ_LT904879_1 1.2|81547|47|NZ_LT904879|PILER-CR 81547-81593 47 NZ_CP046717 Escherichia coli strain T16R plasmid pT16R-1, complete sequence 157769-157815 0 1.0
NZ_LT904879_1 1.2|81547|47|NZ_LT904879|PILER-CR 81547-81593 47 NZ_CP046004 Escherichia coli strain 1919D3 plasmid p1919D3-1, complete sequence 156333-156379 0 1.0
NZ_LT904879_1 1.2|81547|47|NZ_LT904879|PILER-CR 81547-81593 47 NZ_CP024236 Escherichia coli O6:H16 strain 2014EL-1346-6 plasmid unnamed4, complete sequence 115019-115065 0 1.0
NZ_LT904879_1 1.2|81547|47|NZ_LT904879|PILER-CR 81547-81593 47 NZ_CP029895 Salmonella enterica subsp. enterica serovar Typhi strain 311189_252186 plasmid pHCM1, complete sequence 27702-27748 0 1.0
NZ_LT904879_1 1.2|81547|47|NZ_LT904879|PILER-CR 81547-81593 47 NZ_CP029877 Salmonella enterica subsp. enterica serovar Typhi strain 311189_224186 plasmid pHCM1, complete sequence 27702-27748 0 1.0
NZ_LT904879_1 1.2|81547|47|NZ_LT904879|PILER-CR 81547-81593 47 NZ_CP033094 Escherichia coli strain CP53 plasmid pCP53-mcr, complete sequence 99353-99399 0 1.0
NZ_LT904879_1 1.2|81547|47|NZ_LT904879|PILER-CR 81547-81593 47 NZ_CP029926 Salmonella enterica subsp. enterica serovar Typhi strain 311189_218186 plasmid pHCM1, complete sequence 186913-186959 0 1.0
NZ_LT904879_1 1.2|81547|47|NZ_LT904879|PILER-CR 81547-81593 47 NZ_CP029947 Salmonella enterica subsp. enterica serovar Typhi strain 311189_210186 plasmid pHCM1, complete sequence 27702-27748 0 1.0
NZ_LT904879_1 1.2|81547|47|NZ_LT904879|PILER-CR 81547-81593 47 NZ_CP044968 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007098 plasmid pPNCS014881.1, complete sequence 163245-163291 0 1.0
NZ_LT904879_1 1.2|81547|47|NZ_LT904879|PILER-CR 81547-81593 47 NZ_CP044958 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007087 plasmid pPNCS007087.1, complete sequence 95483-95529 0 1.0
NZ_LT904879_1 1.2|81547|47|NZ_LT904879|PILER-CR 81547-81593 47 NZ_CP029943 Salmonella enterica subsp. enterica serovar Typhi strain 311189_212186 plasmid pHCM1, complete sequence 27702-27748 0 1.0
NZ_LT904879_1 1.2|81547|47|NZ_LT904879|PILER-CR 81547-81593 47 NZ_CP029953 Salmonella enterica subsp. enterica serovar Typhi strain 311189_204186 plasmid pHCM1, complete sequence 27702-27748 0 1.0
NZ_LT904879_1 1.2|81547|47|NZ_LT904879|PILER-CR 81547-81593 47 NZ_CP029955 Salmonella enterica subsp. enterica serovar Typhi strain 311189_202186 plasmid pHCM1, complete sequence 27702-27748 0 1.0
NZ_LT904879_1 1.2|81547|47|NZ_LT904879|PILER-CR 81547-81593 47 NZ_CP029924 Salmonella enterica subsp. enterica serovar Typhi strain 311189_221186 plasmid pHCM1, complete sequence 111648-111694 0 1.0
NZ_LT904879_1 1.2|81547|47|NZ_LT904879|PILER-CR 81547-81593 47 NZ_CP029934 Salmonella enterica subsp. enterica serovar Typhi strain 311189_214186 plasmid pHCM1, complete sequence 27702-27748 0 1.0
NZ_LT904879_1 1.2|81547|47|NZ_LT904879|PILER-CR 81547-81593 47 NC_013365 Escherichia coli O111:H- str. 11128 plasmid pO111_1, complete sequence 192157-192203 0 1.0
NZ_LT904879_1 1.2|81547|47|NZ_LT904879|PILER-CR 81547-81593 47 NZ_CP041449 Escherichia coli strain YPE10 plasmid pYPE10-190k-tetX4, complete sequence 157770-157816 0 1.0
NZ_LT904879_1 1.2|81547|47|NZ_LT904879|PILER-CR 81547-81593 47 NZ_CP029939 Salmonella enterica subsp. enterica serovar Typhi strain 311189_206186 plasmid pHCM1, complete sequence 27702-27748 0 1.0
NZ_LT904879_1 1.2|81547|47|NZ_LT904879|PILER-CR 81547-81593 47 NZ_CP029957 Salmonella enterica subsp. enterica serovar Typhi strain 311189_201186 plasmid pHCM1, complete sequence 27702-27748 0 1.0
NZ_LT904879_1 1.2|81547|47|NZ_LT904879|PILER-CR 81547-81593 47 NZ_CP029941 Salmonella enterica subsp. enterica serovar Typhi strain 311189_203186 plasmid pHCM1, complete sequence 27702-27748 0 1.0
NZ_LT904879_1 1.2|81547|47|NZ_LT904879|PILER-CR 81547-81593 47 NZ_CP029910 Salmonella enterica subsp. enterica serovar Typhi strain 311189_219186 plasmid pHCM1, complete sequence 27702-27748 0 1.0
NZ_LT904879_1 1.2|81547|47|NZ_LT904879|PILER-CR 81547-81593 47 NZ_CP029887 Salmonella enterica subsp. enterica serovar Typhi strain 311189_220186 plasmid pHCM1, complete sequence 27702-27748 0 1.0
NZ_LT904879_1 1.2|81547|47|NZ_LT904879|PILER-CR 81547-81593 47 NZ_CP029948 Salmonella enterica subsp. enterica serovar Typhi strain 311189_208186 plasmid pHCM1, complete sequence 27702-27748 0 1.0
NZ_LT904879_1 1.2|81547|47|NZ_LT904879|PILER-CR 81547-81593 47 NZ_CP029937 Salmonella enterica subsp. enterica serovar Typhi strain 311189_207186 plasmid pHCM1, complete sequence 27702-27748 0 1.0
NZ_LT904879_1 1.2|81547|47|NZ_LT904879|PILER-CR 81547-81593 47 NZ_CP029879 Salmonella enterica subsp. enterica serovar Typhi strain 311189_223186 plasmid pHCM1, complete sequence 27702-27748 0 1.0
NZ_LT904879_1 1.2|81547|47|NZ_LT904879|PILER-CR 81547-81593 47 NZ_CP018656 Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1706 plasmid pSE81-1706, complete sequence 237960-238006 0 1.0
NZ_LT904879_1 1.2|81547|47|NZ_LT904879|PILER-CR 81547-81593 47 NZ_CP029931 Salmonella enterica subsp. enterica serovar Typhi strain 311189_215186 plasmid pHCM1, complete sequence 27702-27748 0 1.0
NZ_LT904879_1 1.2|81547|47|NZ_LT904879|PILER-CR 81547-81593 47 NZ_CP029935 Salmonella enterica subsp. enterica serovar Typhi strain 311189_213186 plasmid pHCM1, complete sequence 27702-27748 0 1.0
NZ_LT904879_1 1.2|81547|47|NZ_LT904879|PILER-CR 81547-81593 47 NZ_LT985296 Escherichia coli strain 1454 plasmid RCS78_p, complete sequence 106230-106276 0 1.0
NZ_LT904879_1 1.2|81547|47|NZ_LT904879|PILER-CR 81547-81593 47 NZ_MN101858 Escherichia coli strain 2019XSD11-TC2 plasmid p2019XSD11-TC2-284, complete sequence 267806-267852 0 1.0
NZ_LT904879_1 1.2|81547|47|NZ_LT904879|PILER-CR 81547-81593 47 NZ_MN101856 Escherichia coli strain 2019XSD11 plasmid p2019XSD11-190, complete sequence 173887-173933 0 1.0
NZ_LT904879_1 1.2|81547|47|NZ_LT904879|PILER-CR 81547-81593 47 NZ_MH733010 Klebsiella pneumoniae strain KP14812 plasmid pKP14812-MCR-1, complete sequence 95447-95493 0 1.0
NZ_LT904879_1 1.2|81547|47|NZ_LT904879|PILER-CR 81547-81593 47 NZ_MG904992 Escherichia coli strain 14OD0056 plasmid p14ODMR, complete sequence 20642-20688 0 1.0
NZ_LT904879_1 1.2|81547|47|NZ_LT904879|PILER-CR 81547-81593 47 NZ_MG948335 Escherichia coli strain 3498 plasmid p3498, complete sequence 1212-1258 0 1.0
NZ_LT904879_1 1.2|81547|47|NZ_LT904879|PILER-CR 81547-81593 47 NC_023277 Escherichia coli strain 63743 plasmid pEQ2, complete sequence 259408-259454 0 1.0
NZ_LT904879_1 1.2|81547|47|NZ_LT904879|PILER-CR 81547-81593 47 NC_023289 Escherichia coli strain T23 plasmid pEQ1, complete sequence 210943-210989 0 1.0
NZ_LT904879_1 1.2|81547|47|NZ_LT904879|PILER-CR 81547-81593 47 MG874042 Salmonella sp. strain Sa4 plasmid pSa4-CIP, complete sequence 111729-111775 0 1.0

1. spacer 1.1|81476|51|NZ_LT904879|PILER-CR matches to NZ_LT904879 (Salmonella enterica subsp. enterica serovar Typhi strain ty3-193 genome assembly, plasmid: 2) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

2. spacer 1.1|81476|51|NZ_LT904879|PILER-CR matches to NZ_KX129784 (Escherichia coli strain H226B plasmid pH226B, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

3. spacer 1.1|81476|51|NZ_LT904879|PILER-CR matches to NC_009981 (Salmonella enterica subsp. enterica serovar Choleraesuis plasmid pMAK1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

4. spacer 1.1|81476|51|NZ_LT904879|PILER-CR matches to NZ_CP029645 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_217186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

5. spacer 1.1|81476|51|NZ_LT904879|PILER-CR matches to NZ_CP029729 (Citrobacter sp. CRE-46 strain AR_0157 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

6. spacer 1.1|81476|51|NZ_LT904879|PILER-CR matches to NZ_CP053721 (Escherichia coli strain CP131_Sichuan plasmid pCP131-IncHI1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

7. spacer 1.1|81476|51|NZ_LT904879|PILER-CR matches to NZ_CP026790 (Shigella flexneri 2a strain ATCC 29903 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

8. spacer 1.1|81476|51|NZ_LT904879|PILER-CR matches to NZ_CP039717 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS000211 plasmid p10-3184.1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

9. spacer 1.1|81476|51|NZ_LT904879|PILER-CR matches to KP899804 (Salmonella enterica strain F8475 plasmid pF8475, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

10. spacer 1.1|81476|51|NZ_LT904879|PILER-CR matches to KP899805 (Salmonella enterica strain 109/9 plasmid p109/9, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

11. spacer 1.1|81476|51|NZ_LT904879|PILER-CR matches to KP899806 (Salmonella enterica strain B71 plasmid pB71, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

12. spacer 1.1|81476|51|NZ_LT904879|PILER-CR matches to NZ_CP037875 (Salmonella enterica subsp. enterica serovar 4,[5],12:i:- strain PNCS015054 plasmid pPNCS015054_S2, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

13. spacer 1.1|81476|51|NZ_LT904879|PILER-CR matches to NZ_CP018652 (Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1705 plasmid pSE81-1705-1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

14. spacer 1.1|81476|51|NZ_LT904879|PILER-CR matches to MN232190 (Escherichia coli plasmid pGD27-31, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

15. spacer 1.1|81476|51|NZ_LT904879|PILER-CR matches to NZ_CP044299 (Escherichia coli strain P59A plasmid pP59A-CTX-M-55, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

16. spacer 1.1|81476|51|NZ_LT904879|PILER-CR matches to NZ_CP029690 (Escherichia coli strain SD134209 plasmid pSD134209-1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

17. spacer 1.1|81476|51|NZ_LT904879|PILER-CR matches to NC_003384 (Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

18. spacer 1.1|81476|51|NZ_LT904879|PILER-CR matches to NZ_CP030182 (Salmonella enterica strain SA20030575 plasmid pSA20030575.1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

19. spacer 1.1|81476|51|NZ_LT904879|PILER-CR matches to NZ_CP049354 (Escherichia coli strain T28R plasmid pT28R-1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

20. spacer 1.1|81476|51|NZ_LT904879|PILER-CR matches to NZ_CP023167 (Salmonella enterica subsp. enterica serovar Saintpaul strain SGB23 plasmid pSGB23, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

21. spacer 1.1|81476|51|NZ_LT904879|PILER-CR matches to AP020333 (Salmonella enterica SESen3709 plasmid pSESen3709_1 DNA, complete genome) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

22. spacer 1.1|81476|51|NZ_LT904879|PILER-CR matches to NZ_CP039559 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014846 plasmid p08-4425.1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

23. spacer 1.1|81476|51|NZ_LT904879|PILER-CR matches to NZ_CP037911 (Escherichia coli strain YSP8-1 plasmid pYSP8-1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

24. spacer 1.1|81476|51|NZ_LT904879|PILER-CR matches to NZ_CP046717 (Escherichia coli strain T16R plasmid pT16R-1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

25. spacer 1.1|81476|51|NZ_LT904879|PILER-CR matches to MN256758 (Escherichia coli strain 4M8F plasmid p4M8F, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

26. spacer 1.1|81476|51|NZ_LT904879|PILER-CR matches to MN256759 (Escherichia coli strain 4M9F plasmid p4M9F, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

27. spacer 1.1|81476|51|NZ_LT904879|PILER-CR matches to NZ_CP046007 (Escherichia coli strain 1919D62 plasmid p1919D62-1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

28. spacer 1.1|81476|51|NZ_LT904879|PILER-CR matches to NC_002305 (Salmonella typhi plasmid R27, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

29. spacer 1.1|81476|51|NZ_LT904879|PILER-CR matches to NZ_CP046004 (Escherichia coli strain 1919D3 plasmid p1919D3-1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

30. spacer 1.1|81476|51|NZ_LT904879|PILER-CR matches to NZ_CP024236 (Escherichia coli O6:H16 strain 2014EL-1346-6 plasmid unnamed4, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

31. spacer 1.1|81476|51|NZ_LT904879|PILER-CR matches to NZ_CP029895 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_252186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

32. spacer 1.1|81476|51|NZ_LT904879|PILER-CR matches to NZ_CP029877 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_224186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

33. spacer 1.1|81476|51|NZ_LT904879|PILER-CR matches to NZ_CP033094 (Escherichia coli strain CP53 plasmid pCP53-mcr, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

34. spacer 1.1|81476|51|NZ_LT904879|PILER-CR matches to LT905061 (Salmonella enterica subsp. enterica serovar Typhi isolate ISP_03_07467_SGB110-sc-1979083 genome assembly, plasmid: 2) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

35. spacer 1.1|81476|51|NZ_LT904879|PILER-CR matches to NZ_CP029926 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_218186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

36. spacer 1.1|81476|51|NZ_LT904879|PILER-CR matches to NZ_CP029947 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_210186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

37. spacer 1.1|81476|51|NZ_LT904879|PILER-CR matches to NZ_CP044968 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007098 plasmid pPNCS014881.1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

38. spacer 1.1|81476|51|NZ_LT904879|PILER-CR matches to NZ_CP044958 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007087 plasmid pPNCS007087.1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

39. spacer 1.1|81476|51|NZ_LT904879|PILER-CR matches to NZ_CP029943 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_212186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

40. spacer 1.1|81476|51|NZ_LT904879|PILER-CR matches to NZ_CP029953 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_204186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

41. spacer 1.1|81476|51|NZ_LT904879|PILER-CR matches to NZ_CP029955 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_202186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

42. spacer 1.1|81476|51|NZ_LT904879|PILER-CR matches to NZ_CP022495 (Salmonella enterica subsp. enterica serovar Derby strain SA20035215 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

43. spacer 1.1|81476|51|NZ_LT904879|PILER-CR matches to NZ_CP016184 (Escherichia coli strain EC2 plasmid pEC2-4, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

44. spacer 1.1|81476|51|NZ_LT904879|PILER-CR matches to NZ_CP016183 (Escherichia coli strain EC2_1 plasmid pEC2_1-4, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

45. spacer 1.1|81476|51|NZ_LT904879|PILER-CR matches to NZ_CP029924 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_221186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

46. spacer 1.1|81476|51|NZ_LT904879|PILER-CR matches to NZ_CP029934 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_214186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

47. spacer 1.1|81476|51|NZ_LT904879|PILER-CR matches to MN256757 (Escherichia coli strain 4M18F plasmid p4M18F, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

48. spacer 1.1|81476|51|NZ_LT904879|PILER-CR matches to NC_013365 (Escherichia coli O111:H- str. 11128 plasmid pO111_1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

49. spacer 1.1|81476|51|NZ_LT904879|PILER-CR matches to NZ_CP041449 (Escherichia coli strain YPE10 plasmid pYPE10-190k-tetX4, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

50. spacer 1.1|81476|51|NZ_LT904879|PILER-CR matches to NZ_CP029939 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_206186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

51. spacer 1.1|81476|51|NZ_LT904879|PILER-CR matches to NZ_CP029957 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_201186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

52. spacer 1.1|81476|51|NZ_LT904879|PILER-CR matches to NZ_CP029941 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_203186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

53. spacer 1.1|81476|51|NZ_LT904879|PILER-CR matches to NZ_CP029910 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_219186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

54. spacer 1.1|81476|51|NZ_LT904879|PILER-CR matches to NZ_CP029887 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_220186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

55. spacer 1.1|81476|51|NZ_LT904879|PILER-CR matches to NZ_CP029948 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_208186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

56. spacer 1.1|81476|51|NZ_LT904879|PILER-CR matches to NZ_CP029937 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_207186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

57. spacer 1.1|81476|51|NZ_LT904879|PILER-CR matches to NZ_CP029879 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_223186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

58. spacer 1.1|81476|51|NZ_LT904879|PILER-CR matches to NZ_CP018656 (Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1706 plasmid pSE81-1706, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

59. spacer 1.1|81476|51|NZ_LT904879|PILER-CR matches to NC_016825 (Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

60. spacer 1.1|81476|51|NZ_LT904879|PILER-CR matches to NZ_CP029931 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_215186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

61. spacer 1.1|81476|51|NZ_LT904879|PILER-CR matches to NZ_CP029935 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_213186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

62. spacer 1.1|81476|51|NZ_LT904879|PILER-CR matches to NZ_LT985296 (Escherichia coli strain 1454 plasmid RCS78_p, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

63. spacer 1.1|81476|51|NZ_LT904879|PILER-CR matches to NZ_MN101858 (Escherichia coli strain 2019XSD11-TC2 plasmid p2019XSD11-TC2-284, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

64. spacer 1.1|81476|51|NZ_LT904879|PILER-CR matches to NZ_MN101856 (Escherichia coli strain 2019XSD11 plasmid p2019XSD11-190, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

65. spacer 1.1|81476|51|NZ_LT904879|PILER-CR matches to NZ_MH733010 (Klebsiella pneumoniae strain KP14812 plasmid pKP14812-MCR-1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

66. spacer 1.1|81476|51|NZ_LT904879|PILER-CR matches to MT219825 (Escherichia coli strain RW7-1 plasmid pRW7-1_235k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

67. spacer 1.1|81476|51|NZ_LT904879|PILER-CR matches to NZ_MG904992 (Escherichia coli strain 14OD0056 plasmid p14ODMR, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

68. spacer 1.1|81476|51|NZ_LT904879|PILER-CR matches to NZ_MG948335 (Escherichia coli strain 3498 plasmid p3498, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

69. spacer 1.1|81476|51|NZ_LT904879|PILER-CR matches to NC_023277 (Escherichia coli strain 63743 plasmid pEQ2, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

70. spacer 1.1|81476|51|NZ_LT904879|PILER-CR matches to NC_023289 (Escherichia coli strain T23 plasmid pEQ1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

71. spacer 1.1|81476|51|NZ_LT904879|PILER-CR matches to MT219824 (Escherichia coli strain RT18-1 plasmid pRT18-1_294k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

72. spacer 1.1|81476|51|NZ_LT904879|PILER-CR matches to MG874042 (Salmonella sp. strain Sa4 plasmid pSa4-CIP, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

73. spacer 1.2|81547|47|NZ_LT904879|PILER-CR matches to NZ_CP026790 (Shigella flexneri 2a strain ATCC 29903 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

74. spacer 1.2|81547|47|NZ_LT904879|PILER-CR matches to NZ_CP039717 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS000211 plasmid p10-3184.1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

75. spacer 1.2|81547|47|NZ_LT904879|PILER-CR matches to KP899804 (Salmonella enterica strain F8475 plasmid pF8475, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

76. spacer 1.2|81547|47|NZ_LT904879|PILER-CR matches to KP899805 (Salmonella enterica strain 109/9 plasmid p109/9, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

77. spacer 1.2|81547|47|NZ_LT904879|PILER-CR matches to KP899806 (Salmonella enterica strain B71 plasmid pB71, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

78. spacer 1.2|81547|47|NZ_LT904879|PILER-CR matches to NZ_CP037875 (Salmonella enterica subsp. enterica serovar 4,[5],12:i:- strain PNCS015054 plasmid pPNCS015054_S2, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

79. spacer 1.2|81547|47|NZ_LT904879|PILER-CR matches to NZ_CP018652 (Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1705 plasmid pSE81-1705-1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

80. spacer 1.2|81547|47|NZ_LT904879|PILER-CR matches to NZ_CP039559 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014846 plasmid p08-4425.1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

81. spacer 1.2|81547|47|NZ_LT904879|PILER-CR matches to MN256758 (Escherichia coli strain 4M8F plasmid p4M8F, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

82. spacer 1.2|81547|47|NZ_LT904879|PILER-CR matches to MN256759 (Escherichia coli strain 4M9F plasmid p4M9F, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

83. spacer 1.2|81547|47|NZ_LT904879|PILER-CR matches to NZ_CP046007 (Escherichia coli strain 1919D62 plasmid p1919D62-1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

84. spacer 1.2|81547|47|NZ_LT904879|PILER-CR matches to NC_002305 (Salmonella typhi plasmid R27, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

85. spacer 1.2|81547|47|NZ_LT904879|PILER-CR matches to LT905061 (Salmonella enterica subsp. enterica serovar Typhi isolate ISP_03_07467_SGB110-sc-1979083 genome assembly, plasmid: 2) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

86. spacer 1.2|81547|47|NZ_LT904879|PILER-CR matches to NZ_CP022495 (Salmonella enterica subsp. enterica serovar Derby strain SA20035215 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

87. spacer 1.2|81547|47|NZ_LT904879|PILER-CR matches to NZ_CP016184 (Escherichia coli strain EC2 plasmid pEC2-4, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

88. spacer 1.2|81547|47|NZ_LT904879|PILER-CR matches to NZ_CP016183 (Escherichia coli strain EC2_1 plasmid pEC2_1-4, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

89. spacer 1.2|81547|47|NZ_LT904879|PILER-CR matches to MN256757 (Escherichia coli strain 4M18F plasmid p4M18F, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

90. spacer 1.2|81547|47|NZ_LT904879|PILER-CR matches to NC_016825 (Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

91. spacer 1.2|81547|47|NZ_LT904879|PILER-CR matches to MT219825 (Escherichia coli strain RW7-1 plasmid pRW7-1_235k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

92. spacer 1.2|81547|47|NZ_LT904879|PILER-CR matches to MT219824 (Escherichia coli strain RT18-1 plasmid pRT18-1_294k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

93. spacer 1.2|81547|47|NZ_LT904879|PILER-CR matches to NZ_LT904879 (Salmonella enterica subsp. enterica serovar Typhi strain ty3-193 genome assembly, plasmid: 2) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

94. spacer 1.2|81547|47|NZ_LT904879|PILER-CR matches to NZ_KX129784 (Escherichia coli strain H226B plasmid pH226B, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

95. spacer 1.2|81547|47|NZ_LT904879|PILER-CR matches to NC_009981 (Salmonella enterica subsp. enterica serovar Choleraesuis plasmid pMAK1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

96. spacer 1.2|81547|47|NZ_LT904879|PILER-CR matches to NZ_CP029645 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_217186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

97. spacer 1.2|81547|47|NZ_LT904879|PILER-CR matches to NZ_CP029729 (Citrobacter sp. CRE-46 strain AR_0157 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

98. spacer 1.2|81547|47|NZ_LT904879|PILER-CR matches to NZ_CP053721 (Escherichia coli strain CP131_Sichuan plasmid pCP131-IncHI1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

99. spacer 1.2|81547|47|NZ_LT904879|PILER-CR matches to MN232190 (Escherichia coli plasmid pGD27-31, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

100. spacer 1.2|81547|47|NZ_LT904879|PILER-CR matches to NZ_CP044299 (Escherichia coli strain P59A plasmid pP59A-CTX-M-55, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

101. spacer 1.2|81547|47|NZ_LT904879|PILER-CR matches to NZ_CP029690 (Escherichia coli strain SD134209 plasmid pSD134209-1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

102. spacer 1.2|81547|47|NZ_LT904879|PILER-CR matches to NC_003384 (Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

103. spacer 1.2|81547|47|NZ_LT904879|PILER-CR matches to NZ_CP030182 (Salmonella enterica strain SA20030575 plasmid pSA20030575.1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

104. spacer 1.2|81547|47|NZ_LT904879|PILER-CR matches to NZ_CP049354 (Escherichia coli strain T28R plasmid pT28R-1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

105. spacer 1.2|81547|47|NZ_LT904879|PILER-CR matches to NZ_CP023167 (Salmonella enterica subsp. enterica serovar Saintpaul strain SGB23 plasmid pSGB23, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

106. spacer 1.2|81547|47|NZ_LT904879|PILER-CR matches to AP020333 (Salmonella enterica SESen3709 plasmid pSESen3709_1 DNA, complete genome) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

107. spacer 1.2|81547|47|NZ_LT904879|PILER-CR matches to NZ_CP037911 (Escherichia coli strain YSP8-1 plasmid pYSP8-1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

108. spacer 1.2|81547|47|NZ_LT904879|PILER-CR matches to NZ_CP046717 (Escherichia coli strain T16R plasmid pT16R-1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

109. spacer 1.2|81547|47|NZ_LT904879|PILER-CR matches to NZ_CP046004 (Escherichia coli strain 1919D3 plasmid p1919D3-1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

110. spacer 1.2|81547|47|NZ_LT904879|PILER-CR matches to NZ_CP024236 (Escherichia coli O6:H16 strain 2014EL-1346-6 plasmid unnamed4, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

111. spacer 1.2|81547|47|NZ_LT904879|PILER-CR matches to NZ_CP029895 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_252186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

112. spacer 1.2|81547|47|NZ_LT904879|PILER-CR matches to NZ_CP029877 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_224186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

113. spacer 1.2|81547|47|NZ_LT904879|PILER-CR matches to NZ_CP033094 (Escherichia coli strain CP53 plasmid pCP53-mcr, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

114. spacer 1.2|81547|47|NZ_LT904879|PILER-CR matches to NZ_CP029926 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_218186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

115. spacer 1.2|81547|47|NZ_LT904879|PILER-CR matches to NZ_CP029947 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_210186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

116. spacer 1.2|81547|47|NZ_LT904879|PILER-CR matches to NZ_CP044968 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007098 plasmid pPNCS014881.1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

117. spacer 1.2|81547|47|NZ_LT904879|PILER-CR matches to NZ_CP044958 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007087 plasmid pPNCS007087.1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

118. spacer 1.2|81547|47|NZ_LT904879|PILER-CR matches to NZ_CP029943 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_212186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

119. spacer 1.2|81547|47|NZ_LT904879|PILER-CR matches to NZ_CP029953 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_204186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

120. spacer 1.2|81547|47|NZ_LT904879|PILER-CR matches to NZ_CP029955 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_202186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

121. spacer 1.2|81547|47|NZ_LT904879|PILER-CR matches to NZ_CP029924 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_221186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

122. spacer 1.2|81547|47|NZ_LT904879|PILER-CR matches to NZ_CP029934 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_214186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

123. spacer 1.2|81547|47|NZ_LT904879|PILER-CR matches to NC_013365 (Escherichia coli O111:H- str. 11128 plasmid pO111_1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

124. spacer 1.2|81547|47|NZ_LT904879|PILER-CR matches to NZ_CP041449 (Escherichia coli strain YPE10 plasmid pYPE10-190k-tetX4, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

125. spacer 1.2|81547|47|NZ_LT904879|PILER-CR matches to NZ_CP029939 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_206186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

126. spacer 1.2|81547|47|NZ_LT904879|PILER-CR matches to NZ_CP029957 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_201186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

127. spacer 1.2|81547|47|NZ_LT904879|PILER-CR matches to NZ_CP029941 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_203186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

128. spacer 1.2|81547|47|NZ_LT904879|PILER-CR matches to NZ_CP029910 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_219186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

129. spacer 1.2|81547|47|NZ_LT904879|PILER-CR matches to NZ_CP029887 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_220186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

130. spacer 1.2|81547|47|NZ_LT904879|PILER-CR matches to NZ_CP029948 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_208186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

131. spacer 1.2|81547|47|NZ_LT904879|PILER-CR matches to NZ_CP029937 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_207186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

132. spacer 1.2|81547|47|NZ_LT904879|PILER-CR matches to NZ_CP029879 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_223186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

133. spacer 1.2|81547|47|NZ_LT904879|PILER-CR matches to NZ_CP018656 (Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1706 plasmid pSE81-1706, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

134. spacer 1.2|81547|47|NZ_LT904879|PILER-CR matches to NZ_CP029931 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_215186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

135. spacer 1.2|81547|47|NZ_LT904879|PILER-CR matches to NZ_CP029935 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_213186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

136. spacer 1.2|81547|47|NZ_LT904879|PILER-CR matches to NZ_LT985296 (Escherichia coli strain 1454 plasmid RCS78_p, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

137. spacer 1.2|81547|47|NZ_LT904879|PILER-CR matches to NZ_MN101858 (Escherichia coli strain 2019XSD11-TC2 plasmid p2019XSD11-TC2-284, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

138. spacer 1.2|81547|47|NZ_LT904879|PILER-CR matches to NZ_MN101856 (Escherichia coli strain 2019XSD11 plasmid p2019XSD11-190, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

139. spacer 1.2|81547|47|NZ_LT904879|PILER-CR matches to NZ_MH733010 (Klebsiella pneumoniae strain KP14812 plasmid pKP14812-MCR-1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

140. spacer 1.2|81547|47|NZ_LT904879|PILER-CR matches to NZ_MG904992 (Escherichia coli strain 14OD0056 plasmid p14ODMR, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

141. spacer 1.2|81547|47|NZ_LT904879|PILER-CR matches to NZ_MG948335 (Escherichia coli strain 3498 plasmid p3498, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

142. spacer 1.2|81547|47|NZ_LT904879|PILER-CR matches to NC_023277 (Escherichia coli strain 63743 plasmid pEQ2, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

143. spacer 1.2|81547|47|NZ_LT904879|PILER-CR matches to NC_023289 (Escherichia coli strain T23 plasmid pEQ1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

144. spacer 1.2|81547|47|NZ_LT904879|PILER-CR matches to MG874042 (Salmonella sp. strain Sa4 plasmid pSa4-CIP, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 113765 : 149858 31 Escherichia_phage(27.27%) transposase,integrase attL 137449:137463|attR 148088:148102
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_LT904878
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LT904878_1 824815-824915 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LT904878_2 1200011-1200431 TypeI-E I-E
6 spacers
cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_LT904878_2 2.4|1200249|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT 1200249-1200280 32 NZ_KY494864 Pseudomonas aeruginosa strain FFUP_PS_37 plasmid pJB37, complete sequence 453979-454010 5 0.844
NZ_LT904878_2 2.4|1200249|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT 1200249-1200280 32 NZ_KU130294 Pseudomonas putida strain 12969 plasmid p12969-DIM, complete sequence 251896-251927 5 0.844
NZ_LT904878_2 2.4|1200249|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT 1200249-1200280 32 NZ_CP009975 Pseudomonas putida S12 plasmid pTTS12, complete sequence 6517-6548 5 0.844
NZ_LT904878_2 2.4|1200249|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT 1200249-1200280 32 NZ_CP039989 Pseudomonas aeruginosa strain T2436 plasmid pBT2436, complete sequence 238872-238903 5 0.844
NZ_LT904878_2 2.4|1200249|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT 1200249-1200280 32 NZ_MN433457 Pseudomonas aeruginosa strain PAB546 plasmid pNK546-KPC, complete sequence 235351-235382 5 0.844
NZ_LT904878_2 2.4|1200249|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT 1200249-1200280 32 NZ_CP029096 Pseudomonas aeruginosa strain AR439 plasmid unnamed2, complete sequence 378779-378810 5 0.844
NZ_LT904878_2 2.4|1200249|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT 1200249-1200280 32 NZ_CP045003 Pseudomonas aeruginosa strain PAG5 plasmid pPAG5, complete sequence 82539-82570 5 0.844
NZ_LT904878_2 2.4|1200249|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT 1200249-1200280 32 NZ_CP045917 Pseudomonas aeruginosa strain CF39S plasmid pCF39S, complete sequence 224279-224310 5 0.844
NZ_LT904878_2 2.4|1200249|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT 1200249-1200280 32 MF344571 Pseudomonas aeruginosa plasmid pR31014-IMP, complete sequence 221127-221158 5 0.844
NZ_LT904878_2 2.4|1200249|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT 1200249-1200280 32 MF344569 Pseudomonas aeruginosa plasmid p12939-PER, complete sequence 284046-284077 5 0.844
NZ_LT904878_2 2.4|1200249|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT 1200249-1200280 32 MF344570 Pseudomonas aeruginosa plasmid pA681-IMP, complete sequence 219145-219176 5 0.844
NZ_LT904878_2 2.4|1200249|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT 1200249-1200280 32 NZ_CP039294 Pseudomonas aeruginosa strain PABL048 plasmid pPABL048, complete sequence 55495-55526 5 0.844
NZ_LT904878_2 2.4|1200249|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT 1200249-1200280 32 CP027478 Pseudomonas koreensis strain P19E3 plasmid p1, complete sequence 376216-376247 5 0.844
NZ_LT904878_2 2.4|1200249|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT 1200249-1200280 32 NZ_CP015879 Pseudomonas citronellolis strain SJTE-3 plasmid pRBL16, complete sequence 134871-134902 5 0.844
NZ_LT904878_2 2.4|1200249|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT 1200249-1200280 32 NZ_CP016215 Pseudomonas aeruginosa strain PA121617 plasmid pBM413, complete sequence 88841-88872 5 0.844
NZ_LT904878_2 2.2|1200127|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT 1200127-1200158 32 KJ019071 Synechococcus phage ACG-2014g isolate Syn7803US105, complete genome 59609-59640 7 0.781
NZ_LT904878_2 2.2|1200127|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT 1200127-1200158 32 MN694480 Marine virus AFVG_250M133, complete genome 20886-20917 7 0.781
NZ_LT904878_2 2.2|1200127|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT 1200127-1200158 32 MN694671 Marine virus AFVG_250M145, complete genome 23163-23194 7 0.781
NZ_LT904878_2 2.2|1200127|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT 1200127-1200158 32 MN694753 Marine virus AFVG_250M144, complete genome 25459-25490 7 0.781
NZ_LT904878_2 2.2|1200127|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT 1200127-1200158 32 MN694231 Marine virus AFVG_250M143, complete genome 21163-21194 7 0.781
NZ_LT904878_2 2.2|1200127|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT 1200127-1200158 32 MN693981 Marine virus AFVG_250M146, complete genome 18773-18804 7 0.781
NZ_LT904878_2 2.2|1200127|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT 1200127-1200158 32 NZ_CP046723 Pantoea agglomerans strain ASB05 plasmid pASB05p1, complete sequence 559039-559070 8 0.75
NZ_LT904878_2 2.2|1200127|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT 1200127-1200158 32 NZ_CP034470 Pantoea agglomerans strain CFSAN047153 plasmid pCFSAN047153_1, complete sequence 214654-214685 8 0.75
NZ_LT904878_2 2.2|1200127|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT 1200127-1200158 32 NZ_CP034149 Pantoea agglomerans strain L15 plasmid pPagL15_1, complete sequence 578776-578807 8 0.75
NZ_LT904878_2 2.2|1200127|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT 1200127-1200158 32 NZ_CP034475 Pantoea agglomerans strain CFSAN047154 plasmid pCFSAN047154_1, complete sequence 592092-592123 8 0.75
NZ_LT904878_2 2.2|1200127|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT 1200127-1200158 32 MN694115 Marine virus AFVG_250M901, complete genome 49467-49498 8 0.75
NZ_LT904878_2 2.2|1200127|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT 1200127-1200158 32 NZ_CP046630 Streptococcus equinus strain CNU G6 plasmid p1_CNU_G6, complete sequence 66427-66458 9 0.719
NZ_LT904878_2 2.2|1200127|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT 1200127-1200158 32 NZ_CP046920 Streptococcus sp. CNU G2 plasmid p_CNU_G2, complete sequence 70206-70237 9 0.719
NZ_LT904878_2 2.2|1200127|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT 1200127-1200158 32 MN694046 Marine virus AFVG_250M906, complete genome 22321-22352 9 0.719
NZ_LT904878_2 2.2|1200127|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT 1200127-1200158 32 MN693836 Marine virus AFVG_250M487, complete genome 10882-10913 9 0.719
NZ_LT904878_2 2.2|1200127|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT 1200127-1200158 32 MN693891 Marine virus AFVG_250M480, complete genome 21841-21872 9 0.719
NZ_LT904878_2 2.2|1200127|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT 1200127-1200158 32 MK268344 Salmonella phage Munch, complete genome 122526-122557 9 0.719
NZ_LT904878_2 2.2|1200127|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT 1200127-1200158 32 MN694071 Marine virus AFVG_250M483, complete genome 16976-17007 9 0.719
NZ_LT904878_2 2.2|1200127|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT 1200127-1200158 32 MN694294 Marine virus AFVG_250M486, complete genome 8469-8500 9 0.719
NZ_LT904878_2 2.2|1200127|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT 1200127-1200158 32 MN693751 Marine virus AFVG_250M485, complete genome 13096-13127 9 0.719
NZ_LT904878_2 2.2|1200127|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT 1200127-1200158 32 MN694002 Marine virus AFVG_250M481, complete genome 18787-18818 9 0.719
NZ_LT904878_2 2.2|1200127|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT 1200127-1200158 32 MN694650 Marine virus AFVG_250M482, complete genome 20198-20229 9 0.719
NZ_LT904878_2 2.2|1200127|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT 1200127-1200158 32 MN693906 Marine virus AFVG_250M905, complete genome 17506-17537 9 0.719
NZ_LT904878_2 2.2|1200127|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT 1200127-1200158 32 MN694711 Marine virus AFVG_250M484, complete genome 24974-25005 9 0.719
NZ_LT904878_2 2.7|1200066|32|NZ_LT904878|CRT 1200066-1200097 32 KR052482 Sinorhizobium phage phiN3, complete genome 197290-197321 9 0.719

1. spacer 2.4|1200249|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KY494864 (Pseudomonas aeruginosa strain FFUP_PS_37 plasmid pJB37, complete sequence) position: , mismatch: 5, identity: 0.844

gcggtaaaaatcacggtcggcatacatcgtgg	CRISPR spacer
gctcgaaaaatcacgctcgggatacatcgtgg	Protospacer
**   ********** **** ***********

2. spacer 2.4|1200249|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KU130294 (Pseudomonas putida strain 12969 plasmid p12969-DIM, complete sequence) position: , mismatch: 5, identity: 0.844

gcggtaaaaatcacggtcggcatacatcgtgg	CRISPR spacer
gctcgaaaaatcacgctcgggatacatcgtgg	Protospacer
**   ********** **** ***********

3. spacer 2.4|1200249|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009975 (Pseudomonas putida S12 plasmid pTTS12, complete sequence) position: , mismatch: 5, identity: 0.844

gcggtaaaaatcacggtcggcatacatcgtgg	CRISPR spacer
gctcgaaaaatcacgctcgggatacatcgtgg	Protospacer
**   ********** **** ***********

4. spacer 2.4|1200249|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039989 (Pseudomonas aeruginosa strain T2436 plasmid pBT2436, complete sequence) position: , mismatch: 5, identity: 0.844

gcggtaaaaatcacggtcggcatacatcgtgg	CRISPR spacer
gctcgaaaaatcacgctcgggatacatcgtgg	Protospacer
**   ********** **** ***********

5. spacer 2.4|1200249|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MN433457 (Pseudomonas aeruginosa strain PAB546 plasmid pNK546-KPC, complete sequence) position: , mismatch: 5, identity: 0.844

gcggtaaaaatcacggtcggcatacatcgtgg	CRISPR spacer
gctcgaaaaatcacgctcgggatacatcgtgg	Protospacer
**   ********** **** ***********

6. spacer 2.4|1200249|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029096 (Pseudomonas aeruginosa strain AR439 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.844

gcggtaaaaatcacggtcggcatacatcgtgg	CRISPR spacer
gctcgaaaaatcacgctcgggatacatcgtgg	Protospacer
**   ********** **** ***********

7. spacer 2.4|1200249|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045003 (Pseudomonas aeruginosa strain PAG5 plasmid pPAG5, complete sequence) position: , mismatch: 5, identity: 0.844

gcggtaaaaatcacggtcggcatacatcgtgg	CRISPR spacer
gctcgaaaaatcacgctcgggatacatcgtgg	Protospacer
**   ********** **** ***********

8. spacer 2.4|1200249|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045917 (Pseudomonas aeruginosa strain CF39S plasmid pCF39S, complete sequence) position: , mismatch: 5, identity: 0.844

gcggtaaaaatcacggtcggcatacatcgtgg	CRISPR spacer
gctcgaaaaatcacgctcgggatacatcgtgg	Protospacer
**   ********** **** ***********

9. spacer 2.4|1200249|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT matches to MF344571 (Pseudomonas aeruginosa plasmid pR31014-IMP, complete sequence) position: , mismatch: 5, identity: 0.844

gcggtaaaaatcacggtcggcatacatcgtgg	CRISPR spacer
gctcgaaaaatcacgctcgggatacatcgtgg	Protospacer
**   ********** **** ***********

10. spacer 2.4|1200249|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT matches to MF344569 (Pseudomonas aeruginosa plasmid p12939-PER, complete sequence) position: , mismatch: 5, identity: 0.844

gcggtaaaaatcacggtcggcatacatcgtgg	CRISPR spacer
gctcgaaaaatcacgctcgggatacatcgtgg	Protospacer
**   ********** **** ***********

11. spacer 2.4|1200249|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT matches to MF344570 (Pseudomonas aeruginosa plasmid pA681-IMP, complete sequence) position: , mismatch: 5, identity: 0.844

gcggtaaaaatcacggtcggcatacatcgtgg	CRISPR spacer
gctcgaaaaatcacgctcgggatacatcgtgg	Protospacer
**   ********** **** ***********

12. spacer 2.4|1200249|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039294 (Pseudomonas aeruginosa strain PABL048 plasmid pPABL048, complete sequence) position: , mismatch: 5, identity: 0.844

gcggtaaaaatcacggtcggcatacatcgtgg	CRISPR spacer
gctcgaaaaatcacgctcgggatacatcgtgg	Protospacer
**   ********** **** ***********

13. spacer 2.4|1200249|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT matches to CP027478 (Pseudomonas koreensis strain P19E3 plasmid p1, complete sequence) position: , mismatch: 5, identity: 0.844

gcggtaaaaatcacggtcggcatacatcgtgg	CRISPR spacer
gctcgaaaaatcacgctcgggatacatcgtgg	Protospacer
**   ********** **** ***********

14. spacer 2.4|1200249|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015879 (Pseudomonas citronellolis strain SJTE-3 plasmid pRBL16, complete sequence) position: , mismatch: 5, identity: 0.844

gcggtaaaaatcacggtcggcatacatcgtgg	CRISPR spacer
gctcgaaaaatcacgctcgggatacatcgtgg	Protospacer
**   ********** **** ***********

15. spacer 2.4|1200249|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016215 (Pseudomonas aeruginosa strain PA121617 plasmid pBM413, complete sequence) position: , mismatch: 5, identity: 0.844

gcggtaaaaatcacggtcggcatacatcgtgg	CRISPR spacer
gctcgaaaaatcacgctcgggatacatcgtgg	Protospacer
**   ********** **** ***********

16. spacer 2.2|1200127|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT matches to KJ019071 (Synechococcus phage ACG-2014g isolate Syn7803US105, complete genome) position: , mismatch: 7, identity: 0.781

taaaactataaccaacattaatcttttttaat	CRISPR spacer
ctaaactataaccaacattaaccattgtaatt	Protospacer
. *******************.* ** * * *

17. spacer 2.2|1200127|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT matches to MN694480 (Marine virus AFVG_250M133, complete genome) position: , mismatch: 7, identity: 0.781

taaaactataaccaacattaatc----ttttttaat	CRISPR spacer
taaaactacaactaacattaatcgaaattttc----	Protospacer
********.***.**********    ****.    

18. spacer 2.2|1200127|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT matches to MN694671 (Marine virus AFVG_250M145, complete genome) position: , mismatch: 7, identity: 0.781

taaaactataaccaacattaatc----ttttttaat	CRISPR spacer
taaaactacaactaacattaatcgaaattttc----	Protospacer
********.***.**********    ****.    

19. spacer 2.2|1200127|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT matches to MN694753 (Marine virus AFVG_250M144, complete genome) position: , mismatch: 7, identity: 0.781

taaaactataaccaacattaatc----ttttttaat	CRISPR spacer
taaaactacaactaacattaatcgaaattttc----	Protospacer
********.***.**********    ****.    

20. spacer 2.2|1200127|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT matches to MN694231 (Marine virus AFVG_250M143, complete genome) position: , mismatch: 7, identity: 0.781

taaaactataaccaacattaatc----ttttttaat	CRISPR spacer
taaaactacaactaacattaatcgaaattttc----	Protospacer
********.***.**********    ****.    

21. spacer 2.2|1200127|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT matches to MN693981 (Marine virus AFVG_250M146, complete genome) position: , mismatch: 7, identity: 0.781

taaaactataaccaacattaatc----ttttttaat	CRISPR spacer
taaaactacaactaacattaatcgaaattttc----	Protospacer
********.***.**********    ****.    

22. spacer 2.2|1200127|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046723 (Pantoea agglomerans strain ASB05 plasmid pASB05p1, complete sequence) position: , mismatch: 8, identity: 0.75

taaaacta--taaccaacattaatcttttttaat	CRISPR spacer
--acgttgattaaacaacattaatctttcttaat	Protospacer
  * ..*.  *** **************.*****

23. spacer 2.2|1200127|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034470 (Pantoea agglomerans strain CFSAN047153 plasmid pCFSAN047153_1, complete sequence) position: , mismatch: 8, identity: 0.75

taaaacta--taaccaacattaatcttttttaat	CRISPR spacer
--acgttgattaaacaacattaatctttcttaat	Protospacer
  * ..*.  *** **************.*****

24. spacer 2.2|1200127|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034149 (Pantoea agglomerans strain L15 plasmid pPagL15_1, complete sequence) position: , mismatch: 8, identity: 0.75

taaaacta--taaccaacattaatcttttttaat	CRISPR spacer
--acgttgattaaacaacattaatctttcttaat	Protospacer
  * ..*.  *** **************.*****

25. spacer 2.2|1200127|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034475 (Pantoea agglomerans strain CFSAN047154 plasmid pCFSAN047154_1, complete sequence) position: , mismatch: 8, identity: 0.75

taaaacta--taaccaacattaatcttttttaat	CRISPR spacer
--acgttgattaaacaacattaatctttcttaat	Protospacer
  * ..*.  *** **************.*****

26. spacer 2.2|1200127|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT matches to MN694115 (Marine virus AFVG_250M901, complete genome) position: , mismatch: 8, identity: 0.75

taaaactataaccaacattaatcttttttaat	CRISPR spacer
ttacggaagaaccaagattaatattttttaat	Protospacer
* * .  * ****** ****** *********

27. spacer 2.2|1200127|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046630 (Streptococcus equinus strain CNU G6 plasmid p1_CNU_G6, complete sequence) position: , mismatch: 9, identity: 0.719

taaaactataaccaacattaatcttttttaat	CRISPR spacer
agttattataaacaacattaatcatttttctt	Protospacer
 .  *.***** *********** *****  *

28. spacer 2.2|1200127|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046920 (Streptococcus sp. CNU G2 plasmid p_CNU_G2, complete sequence) position: , mismatch: 9, identity: 0.719

taaaactataaccaacattaatcttttttaat	CRISPR spacer
agttattataaacaacattaatcatttttctt	Protospacer
 .  *.***** *********** *****  *

29. spacer 2.2|1200127|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT matches to MN694046 (Marine virus AFVG_250M906, complete genome) position: , mismatch: 9, identity: 0.719

taaaactataaccaacattaatc-----ttttttaat	CRISPR spacer
taaaactacaactaacattaatcgaaaacttc-----	Protospacer
********.***.**********     .**.     

30. spacer 2.2|1200127|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT matches to MN693836 (Marine virus AFVG_250M487, complete genome) position: , mismatch: 9, identity: 0.719

taaaactataaccaacattaatc-----ttttttaat	CRISPR spacer
taaaactacaactaacattaatcgaaaacttc-----	Protospacer
********.***.**********     .**.     

31. spacer 2.2|1200127|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT matches to MN693891 (Marine virus AFVG_250M480, complete genome) position: , mismatch: 9, identity: 0.719

taaaactataaccaacattaatc-----ttttttaat	CRISPR spacer
taaaactacaactaacattaatcgaaaacttc-----	Protospacer
********.***.**********     .**.     

32. spacer 2.2|1200127|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT matches to MK268344 (Salmonella phage Munch, complete genome) position: , mismatch: 9, identity: 0.719

taaaactataaccaacattaatcttttttaat	CRISPR spacer
taaaactaaaaccatcattaatcaatgctgcc	Protospacer
******** ***** ********  * .*. .

33. spacer 2.2|1200127|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT matches to MN694071 (Marine virus AFVG_250M483, complete genome) position: , mismatch: 9, identity: 0.719

taaaactataaccaacattaatc-----ttttttaat	CRISPR spacer
taaaactacaactaacattaatcgaaaacttc-----	Protospacer
********.***.**********     .**.     

34. spacer 2.2|1200127|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT matches to MN694294 (Marine virus AFVG_250M486, complete genome) position: , mismatch: 9, identity: 0.719

taaaactataaccaacattaatc-----ttttttaat	CRISPR spacer
taaaactacaactaacattaatcgaaaacttc-----	Protospacer
********.***.**********     .**.     

35. spacer 2.2|1200127|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT matches to MN693751 (Marine virus AFVG_250M485, complete genome) position: , mismatch: 9, identity: 0.719

taaaactataaccaacattaatc-----ttttttaat	CRISPR spacer
taaaactacaactaacattaatcgaaaacttc-----	Protospacer
********.***.**********     .**.     

36. spacer 2.2|1200127|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT matches to MN694002 (Marine virus AFVG_250M481, complete genome) position: , mismatch: 9, identity: 0.719

taaaactataaccaacattaatc-----ttttttaat	CRISPR spacer
taaaactacaactaacattaatcgaaaacttc-----	Protospacer
********.***.**********     .**.     

37. spacer 2.2|1200127|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT matches to MN694650 (Marine virus AFVG_250M482, complete genome) position: , mismatch: 9, identity: 0.719

taaaactataaccaacattaatc-----ttttttaat	CRISPR spacer
taaaactacaactaacattaatcgaaaacttc-----	Protospacer
********.***.**********     .**.     

38. spacer 2.2|1200127|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT matches to MN693906 (Marine virus AFVG_250M905, complete genome) position: , mismatch: 9, identity: 0.719

taaaactataaccaacattaatc-----ttttttaat	CRISPR spacer
taaaactacaactaacattaatcgaaaacttc-----	Protospacer
********.***.**********     .**.     

39. spacer 2.2|1200127|32|NZ_LT904878|PILER-CR,CRISPRCasFinder,CRT matches to MN694711 (Marine virus AFVG_250M484, complete genome) position: , mismatch: 9, identity: 0.719

taaaactataaccaacattaatc-----ttttttaat	CRISPR spacer
taaaactacaactaacattaatcgaaaacttc-----	Protospacer
********.***.**********     .**.     

40. spacer 2.7|1200066|32|NZ_LT904878|CRT matches to KR052482 (Sinorhizobium phage phiN3, complete genome) position: , mismatch: 9, identity: 0.719

atccccgcggaggttgcgcaaccggtgtttta	CRISPR spacer
ttttttgcgtaggtttcgcaaccggtgttgtt	Protospacer
 *....*** ***** ************* * 

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 991169 : 1034872 47 Acinetobacter_phage(25.0%) tRNA,transposase,bacteriocin,protease NA
DBSCAN-SWA_2 1299712 : 1365703 54 Salmonella_phage(41.18%) tRNA,tail NA
DBSCAN-SWA_3 2052123 : 2059435 7 Dickeya_phage(16.67%) integrase,protease attL 2053374:2053388|attR 2064553:2064567
DBSCAN-SWA_4 2130573 : 2204673 91 Salmonella_phage(75.41%) head,integrase,holin,tail,transposase,protease,terminase attL 2112639:2112658|attR 2183246:2183265
DBSCAN-SWA_5 2650703 : 2724294 85 Burkholderia_virus(39.47%) tRNA,head,integrase,plate,tail,transposase,protease attL 2641033:2641048|attR 2696899:2696914
DBSCAN-SWA_6 2905320 : 2909732 7 Escherichia_phage(50.0%) NA NA
DBSCAN-SWA_7 3113585 : 3120819 8 Morganella_phage(33.33%) NA NA
DBSCAN-SWA_8 3227119 : 3237626 10 Enterobacteria_phage(37.5%) NA NA
DBSCAN-SWA_9 3313517 : 3322688 10 Enterobacteria_phage(66.67%) tRNA NA
DBSCAN-SWA_10 3557197 : 3563228 6 Salmonella_virus(50.0%) NA NA
DBSCAN-SWA_11 4219723 : 4229488 10 Enterobacteria_phage(50.0%) capsid,integrase attL 4216294:4216307|attR 4227697:4227710
DBSCAN-SWA_12 4368451 : 4442987 80 Salmonella_phage(83.33%) head,integrase,plate,tail,portal,lysis,capsid,terminase attL 4398789:4398804|attR 4421792:4421807
DBSCAN-SWA_13 4743625 : 4769894 36 Salmonella_phage(83.87%) head,integrase,plate,tail,portal,lysis,capsid,terminase attL 4738589:4738603|attR 4750755:4750769
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
3. NZ_LT904880
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 106516 129 Salmonella_phage(91.38%) terminase,integrase,tail attL 1451:1474|attR 83237:83260
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage