CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
NZ_CP012425	Spiroplasma kunkelii CR2-3x plasmid pSKU76, complete sequence	0 crisprs	NA	0
NZ_CP012423	Spiroplasma kunkelii CR2-3x plasmid pSKU226, complete sequence	0 crisprs	NA	0
NZ_CP012424	Spiroplasma kunkelii CR2-3x plasmid pSKU205, complete sequence	0 crisprs	NA	0
NZ_CP010899	Spiroplasma kunkelii CR2-3x chromosome, complete genome	0 crisprs	cas4	15

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

188774 : 194775

Spiroplasma_phage(90.91%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_083436081.1\|188774_188936_+	DUF2649 family protein	A8RHJ3	Spiroplasma_virus	2.2e-16	83.0
WP_053390472.1\|189135_189474_-	hypothetical protein	Q3ZVF7	Spiroplasma_phage	2.5e-38	76.7
WP_053390473.1\|189819_191223_-	DUF3688 family protein	Q9QTH9	Spiroplasma_phage	7.8e-134	65.9
WP_053390474.1\|191235_191472_-	hypothetical protein	Q9QTI0	Spiroplasma_phage	8.7e-30	92.2
WP_083436082.1\|191487_191907_-	hypothetical protein	Q9QTI1	Spiroplasma_phage	1.1e-30	87.0
WP_053390475.1\|191910_192912_-	hypothetical protein	Q9QTG8	Spiroplasma_phage	8.2e-170	94.9
WP_053390476.1\|192916_193126_-	DUF2649 family protein	Q9QTG9	Spiroplasma_phage	1.0e-10	73.9
WP_053390477.1\|193346_193550_-	hypothetical protein	Q9QTH1	Spiroplasma_phage	1.5e-09	77.5
WP_053390478.1\|193682_193874_-	hypothetical protein	Q9QTH2	Spiroplasma_phage	1.1e-19	84.7
WP_053390479.1\|193873_194101_-	hypothetical protein	Q9QTH4	Spiroplasma_phage	4.6e-28	90.3
WP_053390480.1\|194460_194775_-	hypothetical protein	Q3ZVF6	Spiroplasma_phage	5.0e-49	92.3

DBSCAN-SWA_2

358946 : 370909

Spiroplasma_virus(92.31%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_083436084.1\|358946_359096_+	hypothetical protein	A8RHI0	Spiroplasma_virus	6.1e-13	79.6
WP_053390632.1\|359095_359344_+	hypothetical protein	A8RHI2	Spiroplasma_virus	7.7e-37	97.6
WP_053390633.1\|359670_360006_+	hypothetical protein	A8RHI5	Spiroplasma_virus	7.3e-14	70.1
WP_083436085.1\|359998_360439_+	DUF3627 domain-containing protein	A8RHI7	Spiroplasma_virus	3.5e-72	92.5
WP_015967972.1\|360439_360589_+	hypothetical protein	A8RHI9	Spiroplasma_virus	3.3e-11	100.0
WP_015988088.1\|360591_360795_+	DUF2649 family protein	A8RHJ3	Spiroplasma_virus	1.2e-30	100.0
WP_053390635.1\|361144_362158_+	hypothetical protein	A8RHJ5	Spiroplasma_virus	1.8e-172	92.0
WP_053390636.1\|362150_362555_+	hypothetical protein	A8RHJ8	Spiroplasma_virus	1.8e-38	93.1
WP_053390637.1\|362554_362791_+	hypothetical protein	A8RHK0	Spiroplasma_virus	1.4e-32	97.4
WP_053390638.1\|362802_364917_+	DUF3688 family protein	A8RHK2	Spiroplasma_virus	0.0e+00	87.1
WP_053390639.1\|364928_365345_-	DUF3688 family protein	A8RHK2	Spiroplasma_virus	1.3e-07	42.0
WP_053390640.1\|365462_366551_+\|transposase	IS481 family transposase	A8RHK4	Spiroplasma_virus	1.5e-193	94.5
WP_158500738.1\|366772_366862_+	hypothetical protein	NA	NA	NA	NA
WP_053390641.1\|367095_367332_+	aldo/keto reductase	NA	NA	NA	NA
WP_158500739.1\|367611_367770_+	hypothetical protein	NA	NA	NA	NA
WP_053390642.1\|367845_368112_+	hypothetical protein	NA	NA	NA	NA
WP_053390643.1\|368327_369350_-\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA
WP_053390644.1\|369532_370909_+	phosphopyruvate hydratase	W6LP63	Streptococcus_phage	1.8e-146	60.7

DBSCAN-SWA_3

424414 : 430301

Spiroplasma_virus(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_083436088.1\|424414_424531_+	hypothetical protein	A8RHI0	Spiroplasma_virus	1.9e-06	65.8
WP_053390684.1\|424563_424812_+	hypothetical protein	A8RHI2	Spiroplasma_virus	5.5e-35	91.4
WP_053390685.1\|425265_425592_+	hypothetical protein	A8RHI5	Spiroplasma_virus	5.6e-27	80.2
WP_015967972.1\|426028_426178_+	hypothetical protein	A8RHI9	Spiroplasma_virus	3.3e-11	100.0
WP_053390687.1\|426180_426384_+	DUF2649 family protein	A8RHJ3	Spiroplasma_virus	4.8e-29	97.0
WP_053390688.1\|427752_428130_+	hypothetical protein	A8RHJ8	Spiroplasma_virus	2.7e-41	98.9
WP_053390637.1\|428129_428366_+	hypothetical protein	A8RHK0	Spiroplasma_virus	1.4e-32	97.4
WP_053390690.1\|429212_430301_+\|transposase	IS481 family transposase	A8RHK4	Spiroplasma_virus	3.0e-194	95.0

DBSCAN-SWA_4

489810 : 493160

Spiroplasma_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_015988086.1\|489810_490047_-	hypothetical protein	A8RHK0	Spiroplasma_virus	7.6e-34	100.0
WP_015988083.1\|490046_490424_-	hypothetical protein	A8RHJ8	Spiroplasma_virus	1.2e-41	100.0
WP_053390742.1\|490416_491430_-	hypothetical protein	A8RHJ5	Spiroplasma_virus	1.3e-183	99.7
WP_015988088.1\|491429_491633_-	DUF2649 family protein	A8RHJ3	Spiroplasma_virus	1.2e-30	100.0
WP_015988090.1\|491635_491785_-	hypothetical protein	A8RHI9	Spiroplasma_virus	3.3e-11	100.0
WP_083436093.1\|491785_492226_-	DUF3627 domain-containing protein	A8RHI7	Spiroplasma_virus	5.7e-75	97.9
WP_053390685.1\|492218_492545_-	hypothetical protein	A8RHI5	Spiroplasma_virus	5.6e-27	80.2
WP_053390744.1\|492902_493160_-	hypothetical protein	A8RHI2	Spiroplasma_virus	1.2e-32	88.1

DBSCAN-SWA_5

528922 : 536342

Spiroplasma_virus(88.89%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_083436143.1\|528922_529072_+	hypothetical protein	A8RHI0	Spiroplasma_virus	1.2e-08	69.4
WP_053390783.1\|529071_529320_+	hypothetical protein	A8RHI2	Spiroplasma_virus	5.5e-35	91.4
WP_004027789.1\|530372_530522_+	hypothetical protein	A8RHI9	Spiroplasma_virus	7.4e-11	98.0
WP_053390784.1\|530524_530728_+	DUF2649 family protein	A8RHJ3	Spiroplasma_virus	5.9e-27	92.5
WP_053390786.1\|531080_532094_+	hypothetical protein	A8RHJ5	Spiroplasma_virus	2.1e-173	94.4
WP_053390787.1\|532098_532308_-	hypothetical protein	A8RHK0	Spiroplasma_virus	6.1e-27	97.0
WP_053390788.1\|532307_532694_-	hypothetical protein	A8RHJ8	Spiroplasma_virus	1.4e-37	98.8
WP_053390789.1\|532711_534838_+	DUF3688 family protein	A8RHK2	Spiroplasma_virus	0.0e+00	86.6
WP_053390790.1\|534849_535260_-	lipoprotein	NA	NA	NA	NA
WP_053390791.1\|535400_536342_+\|transposase	IS30 family transposase	Q9MBM9	Staphylococcus_prophage	1.3e-12	26.1

DBSCAN-SWA_6

555109 : 565417

Spiroplasma_phage(37.5%)

tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_053390803.1\|555109_557836_+\|tRNA	isoleucine--tRNA ligase	A0A2K9L260	Tupanvirus	6.9e-70	25.9
WP_053390804.1\|557866_558454_+	signal peptidase II	NA	NA	NA	NA
WP_053390805.1\|558446_559367_+	RluA family pseudouridine synthase	A0A2H4UV25	Bodo_saltans_virus	6.7e-09	29.3
WP_053390806.1\|559373_560759_+\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA
WP_053390807.1\|560746_561247_+	dCMP deaminase family protein	V5LNH9	Emiliania_huxleyi_virus	1.4e-40	53.9
WP_053390808.1\|561588_561768_+	hypothetical protein	A8RHI0	Spiroplasma_virus	4.0e-11	76.1
WP_053390632.1\|561736_561985_+	hypothetical protein	A8RHI2	Spiroplasma_virus	7.7e-37	97.6
WP_053390810.1\|563952_564300_+	hypothetical protein	Q3ZVF0	Spiroplasma_phage	3.2e-20	89.5
WP_158500751.1\|565053_565227_-	hypothetical protein	Q3ZVF3	Spiroplasma_phage	2.1e-17	91.2
WP_053390811.1\|565228_565417_-	hypothetical protein	Q3ZVF4	Spiroplasma_phage	4.7e-18	91.5

DBSCAN-SWA_7

606064 : 623032

Spiroplasma_phage(82.35%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_053390844.1\|606064_606976_+\|tRNA	tRNA pseudouridine(55) synthase TruB	A0A1V0SF38	Hokovirus	5.3e-06	28.4
WP_053390845.1\|606975_607863_+	riboflavin kinase	NA	NA	NA	NA
WP_053390846.1\|607960_608227_+	30S ribosomal protein S15	NA	NA	NA	NA
WP_053390847.1\|608399_608855_+	hypothetical protein	NA	NA	NA	NA
WP_158500753.1\|609488_609665_-	hypothetical protein	NA	NA	NA	NA
WP_053390848.1\|609909_610920_+	hypothetical protein	Q3ZVF7	Spiroplasma_phage	3.9e-143	78.9
WP_053390849.1\|611313_611691_+	hypothetical protein	Q3ZVF6	Spiroplasma_phage	1.8e-13	38.4
WP_053390479.1\|612050_612278_+	hypothetical protein	Q9QTH4	Spiroplasma_phage	4.6e-28	90.3
WP_053390478.1\|612277_612469_+	hypothetical protein	Q9QTH2	Spiroplasma_phage	1.1e-19	84.7
WP_053390477.1\|612601_612805_+	hypothetical protein	Q9QTH1	Spiroplasma_phage	1.5e-09	77.5
WP_053390476.1\|613025_613235_+	DUF2649 family protein	Q9QTG9	Spiroplasma_phage	1.0e-10	73.9
WP_053390850.1\|613239_614241_+	hypothetical protein	Q9QTG8	Spiroplasma_phage	8.2e-170	94.9
WP_083436082.1\|614244_614664_+	hypothetical protein	Q9QTI1	Spiroplasma_phage	1.1e-30	87.0
WP_053390851.1\|614679_614916_+	hypothetical protein	Q9QTI0	Spiroplasma_phage	8.7e-30	92.2
WP_053390852.1\|614928_616332_+	DUF3688 family protein	Q9QTH9	Spiroplasma_phage	2.7e-134	66.2
WP_053390853.1\|616648_617110_+	hypothetical protein	Q3ZVF7	Spiroplasma_phage	5.5e-52	76.1
WP_053390854.1\|617898_618147_+	hypothetical protein	Q9QTI1	Spiroplasma_phage	1.1e-30	91.9
WP_158500754.1\|618700_618847_+	hypothetical protein	NA	NA	NA	NA
WP_053390855.1\|618990_619311_+	hypothetical protein	Q3ZVF7	Spiroplasma_phage	1.0e-41	78.4
WP_053390857.1\|620175_620394_+	hypothetical protein	Q3ZVF6	Spiroplasma_phage	9.8e-28	88.4
WP_158500755.1\|620845_620992_+	hypothetical protein	NA	NA	NA	NA
WP_083436094.1\|621518_621668_+	hypothetical protein	A8RHI0	Spiroplasma_virus	8.2e-10	73.5
WP_053390859.1\|622048_623032_-\|transposase	IS30 family transposase	Q9MBM9	Staphylococcus_prophage	7.9e-24	30.0

DBSCAN-SWA_8

632665 : 637621

Spiroplasma_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_053390480.1\|632665_632980_+	hypothetical protein	Q3ZVF6	Spiroplasma_phage	5.0e-49	92.3
WP_053390479.1\|633339_633567_+	hypothetical protein	Q9QTH4	Spiroplasma_phage	4.6e-28	90.3
WP_053390478.1\|633566_633758_+	hypothetical protein	Q9QTH2	Spiroplasma_phage	1.1e-19	84.7
WP_053390477.1\|633890_634094_+	hypothetical protein	Q9QTH1	Spiroplasma_phage	1.5e-09	77.5
WP_053390476.1\|634314_634524_+	DUF2649 family protein	Q9QTG9	Spiroplasma_phage	1.0e-10	73.9
WP_053390870.1\|634528_635530_+	hypothetical protein	Q9QTG8	Spiroplasma_phage	2.8e-170	95.2
WP_083436082.1\|635533_635953_+	hypothetical protein	Q9QTI1	Spiroplasma_phage	1.1e-30	87.0
WP_053390474.1\|635968_636205_+	hypothetical protein	Q9QTI0	Spiroplasma_phage	8.7e-30	92.2
WP_053390871.1\|636217_637621_+	DUF3688 family protein	Q9QTH9	Spiroplasma_phage	7.8e-134	65.9

DBSCAN-SWA_9

685767 : 690659

Spiroplasma_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_053390920.1\|685767_686208_+	DUF3688 family protein	A8RHK2	Spiroplasma_virus	1.7e-23	89.2
WP_144416757.1\|686223_686370_-	DUF3688 family protein	A8RHK2	Spiroplasma_virus	1.1e-06	62.9
WP_053390921.1\|686425_686680_-	lipoprotein	NA	NA	NA	NA
WP_083436097.1\|687160_687310_+	hypothetical protein	A8RHI0	Spiroplasma_virus	1.1e-09	83.0
WP_053390922.1\|687309_687567_+	hypothetical protein	A8RHI2	Spiroplasma_virus	5.9e-32	86.9
WP_053390685.1\|687924_688251_+	hypothetical protein	A8RHI5	Spiroplasma_virus	5.6e-27	80.2
WP_083436098.1\|688243_688684_+	DUF3627 domain-containing protein	A8RHI7	Spiroplasma_virus	2.2e-74	97.3
WP_015967972.1\|688684_688834_+	hypothetical protein	A8RHI9	Spiroplasma_virus	3.3e-11	100.0
WP_015988088.1\|688836_689040_+	DUF2649 family protein	A8RHJ3	Spiroplasma_virus	1.2e-30	100.0
WP_053390924.1\|689039_690053_+	hypothetical protein	A8RHJ5	Spiroplasma_virus	2.3e-180	98.5
WP_053390909.1\|690422_690659_+	hypothetical protein	A8RHK0	Spiroplasma_virus	5.5e-32	97.4

DBSCAN-SWA_10

820713 : 830102

Spiroplasma_virus(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_053391036.1\|820713_821802_-\|transposase	IS481 family transposase	A8RHK4	Spiroplasma_virus	2.6e-193	94.8
WP_053391038.1\|824210_824447_-	hypothetical protein	A8RHK0	Spiroplasma_virus	1.9e-32	98.7
WP_053391039.1\|824446_824824_-	hypothetical protein	A8RHJ8	Spiroplasma_virus	4.3e-39	98.8
WP_053391040.1\|824816_825830_-	hypothetical protein	A8RHJ5	Spiroplasma_virus	6.2e-173	92.6
WP_053391041.1\|825829_826033_-	DUF2649 family protein	A8RHJ3	Spiroplasma_virus	1.1e-28	95.5
WP_083436100.1\|826185_826626_-	DUF3627 domain-containing protein	A8RHI7	Spiroplasma_virus	2.2e-74	96.6
WP_053391043.1\|826618_826951_-	hypothetical protein	A8RHI5	Spiroplasma_virus	1.0e-31	83.3
WP_083436150.1\|827535_827685_-	hypothetical protein	A8RHI0	Spiroplasma_virus	1.5e-16	98.0
WP_053391044.1\|828704_828908_-	DUF2649 family protein	A8RHJ3	Spiroplasma_virus	7.0e-28	94.0
WP_158500778.1\|828910_829060_-	hypothetical protein	A8RHI9	Spiroplasma_virus	3.1e-09	95.9
WP_083436101.1\|829060_829501_-	DUF3627 domain-containing protein	A8RHI7	Spiroplasma_virus	3.1e-73	96.6
WP_053391046.1\|829493_829685_-	hypothetical protein	NA	NA	NA	NA
WP_083436102.1\|829925_830102_-	hypothetical protein	A8RHI0	Spiroplasma_virus	2.0e-10	80.0

DBSCAN-SWA_11

927228 : 941615

Spiroplasma_virus(93.75%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_053391120.1\|927228_927432_-	DUF2649 family protein	A8RHJ3	Spiroplasma_virus	2.2e-21	76.1
WP_083436093.1\|927584_928025_-	DUF3627 domain-containing protein	A8RHI7	Spiroplasma_virus	5.7e-75	97.9
WP_053391121.1\|928017_928275_-	hypothetical protein	A8RHI5	Spiroplasma_virus	2.9e-10	74.6
WP_053391122.1\|928732_928990_-	hypothetical protein	A8RHI2	Spiroplasma_virus	2.7e-32	86.9
WP_083436143.1\|928989_929139_-	hypothetical protein	A8RHI0	Spiroplasma_virus	1.2e-08	69.4
WP_053391124.1\|929822_930071_-	hypothetical protein	A8RHI2	Spiroplasma_virus	2.7e-34	92.7
WP_083436109.1\|930096_930219_-	hypothetical protein	A8RHI0	Spiroplasma_virus	2.3e-10	80.0
WP_053391125.1\|931273_932236_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_083436152.1\|932662_932812_+	hypothetical protein	A8RHI0	Spiroplasma_virus	6.7e-12	75.5
WP_053391127.1\|932811_933060_+	hypothetical protein	A8RHI2	Spiroplasma_virus	3.2e-35	93.9
WP_144416770.1\|933596_933842_+	hypothetical protein	A8RHI7	Spiroplasma_virus	5.1e-25	93.0
WP_015967964.1\|934156_934393_+	hypothetical protein	A8RHK0	Spiroplasma_virus	8.4e-33	98.7
WP_083436110.1\|934404_934539_+	DUF3688 family protein	A8RHK2	Spiroplasma_virus	3.0e-11	94.9
WP_015988083.1\|935031_935409_+	hypothetical protein	A8RHJ8	Spiroplasma_virus	1.2e-41	100.0
WP_053391129.1\|935408_935645_+	hypothetical protein	A8RHK0	Spiroplasma_virus	7.1e-32	97.4
WP_053391130.1\|935656_937798_+	DUF3688 family protein	A8RHK2	Spiroplasma_virus	0.0e+00	88.1
WP_053391131.1\|937809_938235_-	lipoprotein	NA	NA	NA	NA
WP_053391132.1\|939903_940434_-	hypothetical protein	NA	NA	NA	NA
WP_053391133.1\|940709_941615_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	2.3e-25	33.6

DBSCAN-SWA_12

1037254 : 1046717

Spiroplasma_virus(90.91%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_083436154.1\|1037254_1038124_-	DUF3688 family protein	Q3ZVE7	Spiroplasma_phage	7.4e-66	46.1
WP_053391213.1\|1038436_1038988_-	lipoprotein	NA	NA	NA	NA
WP_053391214.1\|1039213_1039852_-	hypothetical protein	NA	NA	NA	NA
WP_144416777.1\|1040176_1040290_+	hypothetical protein	NA	NA	NA	NA
WP_053391215.1\|1040289_1040547_+	hypothetical protein	A8RHI2	Spiroplasma_virus	2.0e-32	86.9
WP_053391216.1\|1040936_1041263_+	hypothetical protein	A8RHI5	Spiroplasma_virus	5.6e-27	80.2
WP_083436093.1\|1041255_1041696_+	DUF3627 domain-containing protein	A8RHI7	Spiroplasma_virus	5.7e-75	97.9
WP_015967972.1\|1041696_1041846_+	hypothetical protein	A8RHI9	Spiroplasma_virus	3.3e-11	100.0
WP_053391217.1\|1041848_1042052_+	DUF2649 family protein	A8RHJ3	Spiroplasma_virus	2.4e-28	95.5
WP_053391218.1\|1042414_1043428_+	hypothetical protein	A8RHJ5	Spiroplasma_virus	1.3e-175	95.0
WP_053390910.1\|1043420_1043825_+	hypothetical protein	A8RHJ8	Spiroplasma_virus	1.3e-38	94.3
WP_015967964.1\|1043824_1044061_+	hypothetical protein	A8RHK0	Spiroplasma_virus	8.4e-33	98.7
WP_053391219.1\|1044072_1046250_+	DUF3688 family protein	A8RHK2	Spiroplasma_virus	0.0e+00	86.9
WP_053391220.1\|1046279_1046717_-	DUF3688 family protein	A8RHK2	Spiroplasma_virus	1.7e-10	38.2

DBSCAN-SWA_13

1148972 : 1159059

Spiroplasma_virus(69.23%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_053391299.1\|1148972_1150283_-	thymidine phosphorylase	A0A0H3UZD4	Geobacillus_virus	6.9e-108	49.0
WP_053391300.1\|1150302_1151094_-	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
WP_053391301.1\|1151095_1151578_-	dihydrofolate reductase	A0A0N9S8H6	Staphylococcus_phage	1.5e-20	34.9
WP_053391302.1\|1151577_1152447_-	thymidylate synthase	A0A0N9SH48	Staphylococcus_phage	1.6e-92	54.8
WP_158500812.1\|1152789_1152948_+	hypothetical protein	NA	NA	NA	NA
WP_053391303.1\|1153193_1153376_-	hypothetical protein	Q3ZVF0	Spiroplasma_phage	5.9e-10	96.9
WP_083436118.1\|1153756_1153906_+	hypothetical protein	A8RHI0	Spiroplasma_virus	2.0e-11	77.6
WP_053391304.1\|1154329_1155010_-	hypothetical protein	NA	NA	NA	NA
WP_083436150.1\|1155567_1155717_+	hypothetical protein	A8RHI0	Spiroplasma_virus	1.5e-16	98.0
WP_015988085.1\|1155716_1155965_+	hypothetical protein	A8RHI2	Spiroplasma_virus	9.1e-38	100.0
WP_015988084.1\|1156316_1156616_+	hypothetical protein	A8RHI5	Spiroplasma_virus	1.7e-38	100.0
WP_083436119.1\|1156645_1157086_+	DUF3627 domain-containing protein	A8RHI7	Spiroplasma_virus	2.0e-75	99.3
WP_015988090.1\|1157086_1157236_+	hypothetical protein	A8RHI9	Spiroplasma_virus	3.3e-11	100.0
WP_053391305.1\|1157238_1157442_+	DUF2649 family protein	A8RHJ3	Spiroplasma_virus	5.7e-30	98.5
WP_053391039.1\|1158445_1158823_+	hypothetical protein	A8RHJ8	Spiroplasma_virus	4.3e-39	98.8
WP_053391306.1\|1158822_1159059_+	hypothetical protein	A8RHK0	Spiroplasma_virus	5.5e-32	97.4

DBSCAN-SWA_14

1236357 : 1287309

Spiroplasma_virus(56.25%)

head,portal,transposase,tRNA,capsid,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_053391369.1\|1236357_1237338_+\|transposase	IS30 family transposase	Q9MBM9	Staphylococcus_prophage	5.8e-27	32.7
WP_053391370.1\|1237679_1239104_-\|tRNA	proline--tRNA ligase	A0A2K9L3R9	Tupanvirus	6.3e-91	37.8
WP_053391371.1\|1239107_1239794_-	hypothetical protein	NA	NA	NA	NA
WP_053391372.1\|1239855_1241394_-	cardiolipin synthase	NA	NA	NA	NA
WP_053391373.1\|1241726_1241993_-	hypothetical protein	NA	NA	NA	NA
WP_158500822.1\|1242027_1242174_-	hypothetical protein	NA	NA	NA	NA
WP_158500823.1\|1243007_1243169_-	hypothetical protein	NA	NA	NA	NA
WP_053391374.1\|1243169_1243394_-	hypothetical protein	NA	NA	NA	NA
WP_053391375.1\|1243449_1243758_-	hypothetical protein	NA	NA	NA	NA
WP_144416783.1\|1244032_1244245_-	hypothetical protein	NA	NA	NA	NA
WP_053391377.1\|1244560_1244791_-	hypothetical protein	NA	NA	NA	NA
WP_158500824.1\|1244956_1245106_-	hypothetical protein	NA	NA	NA	NA
WP_053391378.1\|1245527_1245752_-	hypothetical protein	NA	NA	NA	NA
WP_158500825.1\|1245827_1245989_-	hypothetical protein	NA	NA	NA	NA
WP_053391379.1\|1246092_1247685_-	TrkH family potassium uptake protein	NA	NA	NA	NA
WP_053391380.1\|1247788_1248490_+	TrkA family potassium uptake protein	NA	NA	NA	NA
WP_053391381.1\|1248499_1249942_-\|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	NA	NA	NA	NA
WP_053391382.1\|1249934_1251410_-\|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	NA	NA	NA	NA
WP_053391383.1\|1251411_1251705_-\|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	NA	NA	NA	NA
WP_053391384.1\|1251706_1253710_-	NAD-dependent DNA ligase LigA	A0A0K2QQN8	Ralstonia_phage	2.8e-100	36.7
WP_053391385.1\|1253721_1255347_-	hypothetical protein	NA	NA	NA	NA
WP_053391386.1\|1255461_1255944_-	PTS glucose transporter subunit IIA	NA	NA	NA	NA
WP_053391387.1\|1256333_1258067_-	phosphoenolpyruvate--protein phosphotransferase	NA	NA	NA	NA
WP_158500826.1\|1258247_1258385_+	hypothetical protein	NA	NA	NA	NA
WP_053391388.1\|1258517_1259093_-\|transposase	IS30 family transposase	NA	NA	NA	NA
WP_053391389.1\|1259093_1259504_-	helix-turn-helix domain containing protein	NA	NA	NA	NA
WP_053391390.1\|1259583_1260039_+	DUF3688 family protein	A8RHK2	Spiroplasma_virus	5.8e-06	91.7
WP_083436125.1\|1260050_1262090_-	DUF3688 family protein	A8RHK2	Spiroplasma_virus	0.0e+00	85.8
WP_015967964.1\|1262217_1262454_+	hypothetical protein	A8RHK0	Spiroplasma_virus	8.4e-33	98.7
WP_083436126.1\|1262465_1262627_+	DUF3688 family protein	A8RHK2	Spiroplasma_virus	4.9e-16	100.0
WP_053391391.1\|1262839_1263853_-	hypothetical protein	A8RHJ5	Spiroplasma_virus	3.7e-170	90.5
WP_053391392.1\|1263852_1264056_-	DUF2649 family protein	A8RHJ3	Spiroplasma_virus	1.7e-29	95.5
WP_158500827.1\|1264058_1264208_-	hypothetical protein	A8RHI9	Spiroplasma_virus	1.7e-10	95.9
WP_083436127.1\|1264208_1264649_-	DUF3627 domain-containing protein	A8RHI7	Spiroplasma_virus	3.7e-74	97.3
WP_053391394.1\|1264671_1264968_-	hypothetical protein	A8RHI5	Spiroplasma_virus	7.3e-26	79.2
WP_144416796.1\|1265510_1265678_-	hypothetical protein	NA	NA	NA	NA
WP_053391395.1\|1268163_1269183_-	ribose-phosphate pyrophosphokinase	V5KSY5	Escherichia_phage	1.6e-16	32.2
WP_004028319.1\|1269318_1269546_+	NifU family protein	NA	NA	NA	NA
WP_053391397.1\|1270780_1272103_-	hypothetical protein	NA	NA	NA	NA
WP_053391398.1\|1272293_1272731_-	hypothetical protein	NA	NA	NA	NA
WP_053391399.1\|1272911_1273409_+	lipoprotein	NA	NA	NA	NA
WP_053391400.1\|1273446_1273659_-	hypothetical protein	NA	NA	NA	NA
WP_053391401.1\|1273639_1273921_-	hypothetical protein	NA	NA	NA	NA
WP_053391402.1\|1273944_1275561_-	hypothetical protein	NA	NA	NA	NA
WP_053391403.1\|1275576_1276179_-	hypothetical protein	NA	NA	NA	NA
WP_053391404.1\|1276340_1276763_-	hypothetical protein	NA	NA	NA	NA
WP_053391405.1\|1276752_1277394_-	DUF4065 domain-containing protein	NA	NA	NA	NA
WP_053391406.1\|1277770_1279222_-	hypothetical protein	NA	NA	NA	NA
WP_053391407.1\|1279239_1280166_-	hypothetical protein	NA	NA	NA	NA
WP_053391408.1\|1280176_1281724_-\|tail	phage tail tape measure protein	NA	NA	NA	NA
WP_053391409.1\|1281911_1282244_-	hypothetical protein	NA	NA	NA	NA
WP_053391410.1\|1282236_1282824_-	hypothetical protein	E3W8G1	Leuconostoc_phage	4.9e-21	37.8
WP_053391411.1\|1282840_1283218_-	hypothetical protein	NA	NA	NA	NA
WP_053391412.1\|1283223_1283622_-	hypothetical protein	NA	NA	NA	NA
WP_053391413.1\|1283633_1283960_-	hypothetical protein	NA	NA	NA	NA
WP_053391414.1\|1283949_1284318_-\|head,tail	phage gp6-like head-tail connector protein	NA	NA	NA	NA
WP_158500828.1\|1284341_1286117_-\|capsid	phage major capsid protein	A0A1W6JQG3	Corynebacterium_phage	1.1e-07	28.4
WP_053391416.1\|1286103_1287309_-\|portal	phage portal protein	J9QE83	Clostridium_phage	1.6e-26	26.1

DBSCAN-SWA_15

1371545 : 1387312

Spiroplasma_virus(83.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_053391491.1\|1371545_1375298_-	DNA-directed RNA polymerase subunit beta'	R4TQM7	Phaeocystis_globosa_virus	1.9e-57	24.9
WP_053391492.1\|1375312_1379221_-	DNA-directed RNA polymerase subunit beta	A0A1B1ISA9	uncultured_Mediterranean_phage	9.4e-52	25.5
WP_083436143.1\|1379646_1379796_+	hypothetical protein	A8RHI0	Spiroplasma_virus	1.2e-08	69.4
WP_053391493.1\|1379795_1380053_+	hypothetical protein	A8RHI2	Spiroplasma_virus	4.1e-33	90.5
WP_053391494.1\|1380442_1380769_+	hypothetical protein	A8RHI5	Spiroplasma_virus	4.3e-27	81.2
WP_083436134.1\|1380761_1381202_+	DUF3627 domain-containing protein	A8RHI7	Spiroplasma_virus	1.3e-74	97.3
WP_015988090.1\|1381202_1381352_+	hypothetical protein	A8RHI9	Spiroplasma_virus	3.3e-11	100.0
WP_053391496.1\|1381354_1381558_+	DUF2649 family protein	A8RHJ3	Spiroplasma_virus	4.5e-27	91.0
WP_053391497.1\|1382925_1383303_+	hypothetical protein	A8RHJ8	Spiroplasma_virus	2.7e-41	98.9
WP_053391498.1\|1383302_1383539_+	hypothetical protein	A8RHK0	Spiroplasma_virus	3.2e-32	97.4
WP_053391499.1\|1385695_1386106_-	DUF3688 family protein	A8RHK2	Spiroplasma_virus	9.6e-08	39.5
WP_053391500.1\|1386223_1387312_+\|transposase	IS481 family transposase	A8RHK4	Spiroplasma_virus	4.7e-195	95.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP010899

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection