CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP012506	Mycobacterium tuberculosis strain SCAID 187.0 chromosome, complete genome	13 crisprs	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	9	26	2	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP012506_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012506_2

333094-333205

Orphan

Consensus_repeat	Method
CCGCCGTTGCCGCCGTTGCCGATCA	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP012506_2

>merge|NZ_CP012506|2|333094-333205|PILER-CR
CCGCCGTTGCCGCCGTTGCCGATCTGCACGCCGTTACCGCCCGCTCCGCCGTTGCCGCCGGTGCCGGTCACGCTGGCGCCGCCGTCACCGCCGTTGCCGCCGTTGCCGATCA

>NZ_CP012506|2|1|333094-333205|PILER-CR
CCGCCGTTGCCGCCGTTGCCGATCT	GCACGCCGTTACCGCCCGCT
CCGCCGTTGCCGCCGGTGCCGGTCA	CGCTGGCGCCGCCGTCA
CCGCCGTTGCCGCCGTTGCCGATCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012506.2\|WP_003401397.1\|327971_328592_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP012506.2\|WP_003401404.1\|330014_330935_+\|DUF2236-domain-containing-protein	unknown	unknown	gnl\|CDD\|226188
NZ_CP012506.2\|WP_003401478.1\|343993_347986_+\|type-VII-secretion-system-ESX-3-FtsK/SpoIIIE-family-ATPase-EccC3	unknown	unknown	gnl\|CDD\|274858
NZ_CP012506.2\|WP_003902643.1\|337722_339333_+\|PPE-family-protein	unknown	unknown	gnl\|CDD\|227938
NZ_CP012506.2\|WP_003401386.1\|321605_322799_-\|DNA-polymerase-domain-containing-protein	unknown	unknown	gnl\|CDD\|225823
NZ_CP012506.2\|WP_025096313.1\|326799_327975_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|378820
NZ_CP012506.2\|WP_003401392.1\|324533_326729_-\|acyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|173841
NZ_CP012506.2\|WP_003401448.1\|339356_340265_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|225852
NZ_CP012506.2\|WP_011961607.1\|331426_331609_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012506.2\|WP_003899886.1\|329199_329925_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP012506.2\|WP_003401488.1\|348293_349835_+\|type-VII-secretion-system-ESX-3-target-PPE4	unknown	unknown	gnl\|CDD\|227938
NZ_CP012506.2\|WP_003401463.1\|340488_342384_+\|type-VII-secretion-system-ESX-3-AAA-family-ATPase-EccA3	unknown	unknown	gnl\|CDD\|188437
NZ_CP012506.2\|WP_003401399.1\|328688_329270_+\|VOC-family-protein	unknown	unknown	gnl\|CDD\|366361
NZ_CP012506.2\|WP_003401406.1\|330974_331403_-\|type-II-toxin-antitoxin-system-VapC-family-toxin	unknown	unknown	gnl\|CDD\|350245
NZ_CP012506.2\|WP_003899884.1\|322834_324517_+\|acyl-CoA-synthetase	unknown	unknown	gnl\|CDD\|236097
NZ_CP012506.2\|WP_003401503.1\|349883_350177_+\|type-VII-secretion-system-protein-EsxG	unknown	unknown	gnl\|CDD\|274862
NZ_CP012506.2\|WP_003401514.1\|350206_350497_+\|WXG100-family-type-VII-secretion-target	unknown	unknown	gnl\|CDD\|227179
NZ_CP012506.2\|WP_031660215.1\|334774_337432_-\|PE-family-protein	unknown	unknown	gnl\|CDD\|376422
NZ_CP012506.2\|WP_003401485.1\|347982_348291_+\|type-VII-secretion-system-ESX-3-target-PE5	unknown	unknown	gnl\|CDD\|376422
NZ_CP012506.2\|WP_003401472.1\|342380_343997_+\|type-VII-secretion-system-ESX-3-subunit-EccB3	unknown	unknown	gnl\|CDD\|368288

Protein	Function_ID	Function_description	E-value
NZ_CP012506.2\|WP_003401397.1\|327971_328592_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	6.87158e-12
NZ_CP012506.2\|WP_003401404.1\|330014_330935_+\|DUF2236-domain-containing-protein	gnl\|CDD\|226188	COG3662, COG3662, Uncharacterized protein conserved in bacteria [Function unknown].	2.89836e-118
NZ_CP012506.2\|WP_003401478.1\|343993_347986_+\|type-VII-secretion-system-ESX-3-FtsK/SpoIIIE-family-ATPase-EccC3	gnl\|CDD\|274858	TIGR03924, T7SS_EccC_a, type VII secretion protein EccCa. This model represents the N-terminal domain or EccCa subunit of the type VII secretion protein EccC as found in the Actinobacteria. Type VII secretion is defined more broadly as including secretion systems for ESAT-6-like proteins in the Firmicutes as well as in the Actinobacteria, but this family does not show close homologs in the Firmicutes. [Protein fate, Protein and peptide secretion and trafficking].	0
NZ_CP012506.2\|WP_003401386.1\|321605_322799_-\|DNA-polymerase-domain-containing-protein	gnl\|CDD\|225823	COG3285, COG3285, Predicted eukaryotic-type DNA primase [DNA replication, recombination, and repair].	2.78761e-127
NZ_CP012506.2\|WP_003902643.1\|337722_339333_+\|PPE-family-protein	gnl\|CDD\|227938	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion].	1.75244e-73
NZ_CP012506.2\|WP_025096313.1\|326799_327975_-\|alpha/beta-hydrolase	gnl\|CDD\|378820	pfam12146, Hydrolase_4, Serine aminopeptidase, S33. This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. It is found in association with pfam00561. The majority of the members in this family carry the exopeptidase active-site residues of Ser-122, Asp-239 and His-269 as in UniProtKB:Q7ZWC2.	0.0018025
NZ_CP012506.2\|WP_003401392.1\|324533_326729_-\|acyl-CoA-dehydrogenase	gnl\|CDD\|173841	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26. Putative acyl-CoA dehydrogenases (ACAD). Mitochondrial acyl-CoA dehydrogenases (ACAD) catalyze the alpha, beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of ACAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. The ACD family includes the eukaryotic beta-oxidation, as well as amino acid catabolism enzymes. These enzymes share high sequence similarity, but differ in their substrate specificities. The mitochondrial ACD's are generally homotetramers and have an active site glutamate at a conserved position.	1.76306e-158
NZ_CP012506.2\|WP_003401448.1\|339356_340265_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|225852	COG3315, COG3315, O-Methyltransferase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism].	1.10201e-94
NZ_CP012506.2\|WP_003899886.1\|329199_329925_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	7.66172e-07
NZ_CP012506.2\|WP_003401488.1\|348293_349835_+\|type-VII-secretion-system-ESX-3-target-PPE4	gnl\|CDD\|227938	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion].	1.09345e-59
NZ_CP012506.2\|WP_003401463.1\|340488_342384_+\|type-VII-secretion-system-ESX-3-AAA-family-ATPase-EccA3	gnl\|CDD\|188437	TIGR03922, T7SS_EccA, type VII secretion AAA-ATPase EccA. This model represents the AAA family ATPase, EccA, of the actinobacterial flavor of type VII secretion systems. Species such as Mycobacterium tuberculosis have several instances of this system per genome, designated EccA1, EccA2, etc. [Protein fate, Protein and peptide secretion and trafficking].	0
NZ_CP012506.2\|WP_003401399.1\|328688_329270_+\|VOC-family-protein	gnl\|CDD\|366361	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily.	5.1808e-20
NZ_CP012506.2\|WP_003401406.1\|330974_331403_-\|type-II-toxin-antitoxin-system-VapC-family-toxin	gnl\|CDD\|350245	cd18678, PIN_MtVapC25_VapC33-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC25, VapC33, and related proteins. This subfamily includes the Virulence associated protein C (VapC)-like PIN (PilT N terminus) domain of Mycobacterium tuberculosis VapC25, VapC29, VapC33, VapC37, and VapC39 toxins. It belongs to the VapC-like family of the PIN domain nuclease superfamily. VapC is a PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include FitB toxin of the FitAB TA system, eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The structural properties of the PIN domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions; in some members, additional metal coordinating residues can be found while some others lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	2.23805e-60
NZ_CP012506.2\|WP_003899884.1\|322834_324517_+\|acyl-CoA-synthetase	gnl\|CDD\|236097	PRK07788, PRK07788, acyl-CoA synthetase; Validated.	0
NZ_CP012506.2\|WP_003401503.1\|349883_350177_+\|type-VII-secretion-system-protein-EsxG	gnl\|CDD\|274862	TIGR03930, WXG100_ESAT6, WXG100 family type VII secretion target. Members of this protein family include secretion targets for the two main variants of type VII secretion systems (T7SS), one found in the Actinobacteria, one found in the Firmicutes. This model was derived through iteration from pfam06013. The best characterized member of this family is ESAT-6 from Mycobacterium tuberculosis. Members of this family usually are ~100 amino acids in length but occasionally have a long C-terminal extension.	0.00514324
NZ_CP012506.2\|WP_003401514.1\|350206_350497_+\|WXG100-family-type-VII-secretion-target	gnl\|CDD\|227179	COG4842, COG4842, Uncharacterized protein conserved in bacteria [Function unknown].	2.85211e-21
NZ_CP012506.2\|WP_031660215.1\|334774_337432_-\|PE-family-protein	gnl\|CDD\|376422	pfam00934, PE, PE family. This family named after a PE motif near to the amino terminus of the domain. The PE family of proteins all contain an amino-terminal region of about 110 amino acids. The carboxyl terminus of this family are variable and fall into several classes. The largest class of PE proteins is the highly repetitive PGRS class which have a high glycine content. The function of these proteins is uncertain but it has been suggested that they may be related to antigenic variation of Mycobacterium tuberculosis.	1.72556e-32
NZ_CP012506.2\|WP_003401485.1\|347982_348291_+\|type-VII-secretion-system-ESX-3-target-PE5	gnl\|CDD\|376422	pfam00934, PE, PE family. This family named after a PE motif near to the amino terminus of the domain. The PE family of proteins all contain an amino-terminal region of about 110 amino acids. The carboxyl terminus of this family are variable and fall into several classes. The largest class of PE proteins is the highly repetitive PGRS class which have a high glycine content. The function of these proteins is uncertain but it has been suggested that they may be related to antigenic variation of Mycobacterium tuberculosis.	7.41358e-11
NZ_CP012506.2\|WP_003401472.1\|342380_343997_+\|type-VII-secretion-system-ESX-3-subunit-EccB3	gnl\|CDD\|368288	pfam05108, T7SS_ESX1_EccB, Type VII secretion system ESX-1, transport TM domain B. EccB is a family of largely Gram-positive bacterial transmembrane componenets of the type VII secretion system characterized in Mycobacterium tuberculosis, systems ESX1-5. Translocation of virulent peptides through the membranes is thought to be mediated via a complex that includes EccB, EccC, EccD, EccE, and MycP. EccB, EccC, EccD, and EccE form a stable complex in the mycobacterial cell envelope.	0

>NZ_CP012506.2|WP_011961607.1|331426_331609_-|hypothetical-protein
MGAVIEDALRRELAAARTGGARPTVPVFDAGTGPRPGIDLTSNTVLSEVLDEGLELNSRK
>NZ_CP012506.2|WP_003401406.1|330974_331403_-|type-II-toxin-antitoxin-system-VapC-family-toxin
MFLIDVNVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLTTNRRIFEIPSPRADAFAFVEAVNAQPHHLPTSPGPRHLVLLRKLCDEADASGDLIPDAVLGAIAVEHHCAVVSLDRDFARFASVRHIRPPI
>NZ_CP012506.2|WP_003401404.1|330014_330935_+|DUF2236-domain-containing-protein
MAISLVAHQPIPHVERPMADPPRLQLARRRRSAAGPGGNEDSLMGVALLAGPANVIMELAMPGVGYGVLESRVESGRLDRHPIKRARTTFTYVAVAVAGSDDQKAAFRRAVNKVHAQVYSTPESPVSYHAFDPELQLWVAACLYKGGVDVYRTFVGEMDDEEADHHYRAGMAMGTTLQVPPQMWPPDRAAFDRYWRQSLDRVHIDDVVRDYLYPIVALRIRGIALPGPLRRLSEGIALLITTGFLPQRFRDEMRLPWDATKQRRFDALMAVLRTVNRLMPRFVREFPFNLMLWDLDRRMRRGRPLV
>NZ_CP012506.2|WP_003899886.1|329199_329925_-|TetR/AcrR-family-transcriptional-regulator
MTRSDRPYRGVEAAERLATRRRQSLSAGLDLLGSDQHDIAELTIRTICRRAGLSVRYFYESFTDKDEFVGRVFDWVVAELVATTQAAVTAVPAREQTRAGMANIVRTITADARVGRLLFSTQLANAVITRKRAESSALFAMLSGQHAVDTLHAPANDHVKAVAHFAVGGVGQTISAWLAGDVRLDPDQLVDQLAALLDELTDPNLSRPRVAATAAKSGANDPQPPEVAGQPPSSARPARRS
>NZ_CP012506.2|WP_003401399.1|328688_329270_+|VOC-family-protein
MIKPHNTNTEFELGGINHVALVCSDMARTVDFYSNILGMPLIKALDLPGGQGQHFFFDAGNGDCVAFFWFADAPDRVPGLSSPVAIPGIGDITSAVSTMNHLAFHVPAERFDAYRQRLKDKGVRVGPVLNHDDSETQVSAVVHPGVYVRSFYFQDPDGITLEFACWTKEFTTSDAQAVPKTAADRRPPVAADR
>NZ_CP012506.2|WP_003401397.1|327971_328592_-|TetR/AcrR-family-transcriptional-regulator
MPDFPTQRGRRTQAAIDAAARTVVVRNGILATTVADITAEAGRSAASFYNYYDSKEAMVRQWALRFRDDANQRALSVIRHGLSDRERAYEAAAAHWYTYRNRLAEAISVSQLAMVSDDFAQYWSEICQIPISFITETVKRAQAHGYCVGDDPQLMAEAIVAMFNQFCYLQLSGKRSRRGQPDDQACIQTLANIYYRAIYSKEDSSN
>NZ_CP012506.2|WP_025096313.1|326799_327975_-|alpha/beta-hydrolase
MTGRAATPGVIREFVGLPSRTAGRAAAGGHPCQGLYHHSVGRKPKVALIAAHYQIDFSEHYLAEYMAIRGIGFLGWNTRFRGFESSFLLDHALVDIGVGVRWLREVQGVETVVLLGNSGGGSLMAAYQSQAVDPNVTPLDGMRPAAGVTELPAADAYVAAAAHPGRPDVLTAWMDAAVIDENDPVATDPELDLFDERNGPPYSPEFISRYRSAQVKRNHTITDWAESELKRVRAAGFSDRPFSVMRTWADPRMVDPSIEPTKRRPNQCYAGTPVKANRSAHGIAAACTLRGWLGMWSLRVAQTRAAPHLARITCPALVLNAEADTGIFPSDAQQIYDGLASSDKTQVSIDTDHYFTTPGARSEQADTIAKWIASGGAECSHPFRRPSASQR
>NZ_CP012506.2|WP_003401392.1|324533_326729_-|acyl-CoA-dehydrogenase
MSIAITPEHYELADSVRSLVARVAPSEVLHAALESPVENPPPYWQAAAEQGLQGVHLAESVGGQGFGILELAVVLAEFGYGAVPGPFVPSAIASALIAAHDPQAKVLAELATGAAIAAYALDSGLTATRHGDVLVIRGEVRAVPAAAQASVLVLPVAIESRDEWVVLRNDQLEIEAVKSLDPLRPIAHVRANAVDVSDDALLSNLTMTTAHALMSTLLSAEAVGVARWATDTASAYAKIREQFGRPIGQFQAIKHKCAEMIADTERATAAVWDAARALDDAGESSSDVEFAAAVAATLAPATAQRCTQDCIQVHGGIGFTWEHDTNVYYRRALMLAACFGRGSEYPQRVVDTATTAGMRPVDIDLDPSTEKLRAQIRAEVAALKAMPREPRTVAIAEGGWVLPYLPKPWGRAASPVEQIIIAQEFTAGRVKRPQIAIATWIVPSIVAFGTDNQKQRLLPPTFRGDIFWCQLFSEPGAGSDLASLATKATRVDGGWRITGQKIWTTGAQYSQWGALLARTDPSAPKHNGITYFLLDMKSEGVQVKPLRELTGKEFFNTVYLDDVFVPDELVLGEVNRGWEVSRNTLTAERVSIGGSDSTFLPTLGEFVDFVRDYRFEGQFDQVARHRAGQLIAEGHATKLLNLRSTLLTLAGGDPMAPAAISKLLSMRTGQGYAEFAVSSFGTDAVIGDTERLPGKWGEYLLASRATTIYGGTSEVQLNIIAERLLGLPRDP
>NZ_CP012506.2|WP_003899884.1|322834_324517_+|acyl-CoA-synthetase
MPNLTDLPGQAVSKLQKSIGQYVARGTAELHYLRKIIESGAIGLEPPLNYAALAADIRKWGEVGMLPSHNARRAPNRAAVIDEEGTLTFSELDEAAHAVANGLLAKGVRAGDGVAILARNHRWFVIANYGAARVGARIILLNSEFSGPQIKEVSDREGAKVIIYDDEYTKAVSLAQPPLGKLRALGVNPDDDKPSGSSDETLAELIAHSSTAPAPKASRRASIIILTSGTTGTPKGANRNTPPTLAPIGGILSHVPFKAGEVTLLPSPMFHALGYMHAALAMFLGSTLVLRRRFKPALVLEDIEKHKATSMVVVPVMLSRILDQLEKTEPKPDLSSLKIVFVSGSQLGAELATRALGDLGPVIYNMYGSTEVAFATIAGPKDLQFNPSTVGPVVKGVTVKILDENGNEVPQGAVGRIFVGNAFPFEGYTGGGGKQIIDGLLSSGDVGYFDERGLLYVSGRDDEMIVSGGENVFPAEVEDLISGHPDVVEAAAIGVDDKEFGARLRAFVVKKPGADLDEDTIKQYVRDHLARYKVPREVIFLDELPRNPTGKVLKRELRKL
>NZ_CP012506.2|WP_003401386.1|321605_322799_-|DNA-polymerase-domain-containing-protein
MSRMAAPVSLDVHGRQVIVTHPGRVVFPAHNDRKGYTKFDLVRYYLAVAEGAMRGVAGRPMILKRFVKGISAEAVFQKRAPANRPDWVDVAELHYASGRSAAEAVIHDAAGLAWVINLGCVDLNPHPVLAGDLDHPDELRVDLDPMPGVAWQRVVEVALVVREVLEDYGLTAWPKTSGSRGFHVYARIAPCWSFPQVRLAAQTVAREVERRLPDAATSRWWKEEREGVFVDFNQNAKDRTVASAYSVRATPDARVSTPLHWEEVPGCDPAVFTMATVPSRLADIGDPWAGMDDAVGRLDRLLMLAEELGPPQKAQSAKPLIEIARAKTRAEAMAALDIWRDRYPGAAALLRPADVLVDGMRGPSSIWYRIRINLQHVPADQRPPQEELIADYSPWPR
>NZ_CP012506.2|WP_031660215.1|334774_337432_-|PE-family-protein
MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQAYQALSAQAQAFHAQFTQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGTNGAPGTGANGGDGGWLIGNGGAGGSGAAGVNGGAGGNGGAGGLIGNGGAGGAGGVASSGIGGSGGAGGNAMLFGAGGAGGAGGAGGNAGLLFGAAGVGGAGGFTNGSALGGAGGAGGAGGLFATGGVGGSGGAGSSGGAGGAGGAGGLFGAGGTGGHGGFADSSFGGVGGAGGAGGLFGAGGEGGSGGHSLVAGGDGGAGGNAGMLALGAAGGAGGIGGDGGTLTAGGIGGAGGAGGNAGLLFGSGGSGGAGGFGFADGGQGGPGGNAGTVFGSGGAGGNGGVGQGFAGGIGGAGGTPGLIGNGGNGGNGGASAVTGGNGGIGGTGVLIGNGGNGGSGGIGAGKAGVGGVSGLLLGLDGFNAPASTSPLHTLQQNVLNVVNEPFQTLTGRPLIGNGANGTPGTGADGGAGGWLFGNGGNGGSGATGTNGGDGGDGGAGGIFFGTGGTGGAGGVGTTGTGGDGGAGGAAFLMGSGGNGGSGGAGLTAGGDGGDGGNAGSFFGAAGTGGAGASTKAGGTGGTGGNGGLFANGGAGGSGGLGGDAGTGGAGGNGGLFGAGGTGGAGGSLGPGAGGAGGNGGLFGAGGTGGSGGHGTPAAVPGGAGGAGGNAGLFSLGASGGAGGSGGSSLTDGGGIGGVGGAGGLLFGYGGAGGAGGYSNIGAGGAGGAGGNAGMLSGSGGSGGTGGASGAAKGGVGGNGGTAGVFGNGGDGGAGGFGAGTGGNGGVGGNAVLIGNGGNGGNGGKAGGTPGAGGTSGLLIGENGLNGLP
>NZ_CP012506.2|WP_003902643.1|337722_339333_+|PPE-family-protein
MTLWMASPPEVHSALLSSGPGPGSVLSAAGVWSSLSAEYAAVADELIGLLGAVQTGAWQGPSAAAYVAAHAPYLAWLMRASETSAEAAARHETVAAAYTTAVAAMPTLVELAANHTLHGVLVATNFFGINTIPIALNEADYARMWTQAASTMATYQAVAEAAVASAPQTTPAPPILAAEAADDDHDHDHDHGGEPTPLDYLVAEILRIISGGRLIWDPAEGTMNGIPFEDYTDAAQPIWWVVRAIEFSKDFETFVQKLFVNPVEAFQFYFELLLFDYPTHIVQIVEALSQSPQLLAVALGSVISNLGAVTGFAGLSGLAGMQPAAIPALAPVAAAPPTLPAVAMAPTMAAPGAAVASAAAPASAPAASTVASATPAPPPAPGAAGFGYPYAIAPPGIGFGSGMSASASAQRKAPQPDSAAAAAAAAAVRDQARARRRRRVTRRGYGDEFMDMNIDVDPDWGPPPGEDPVTSTVASDRGAGHLGFAGTARREAVADAAGMTTLAGDDFGDGPTTPMVPGSWDPDRDAPGSAEPGDRG
>NZ_CP012506.2|WP_003401448.1|339356_340265_+|class-I-SAM-dependent-methyltransferase
MRTEGDSWDITTSVGSTALFVATARALEAQKSDPLVVDPYAEAFCRAVGGSWADVLDGKLPDHKLKSTDFGEHFVNFQGARTKYFDEYFRRAAAAGARQVVILAAGLDSRAYRLPWPDGTTVFELDRPQVLDFKREVLASHGAQPRALRREIAVDLRDDWPQALRDSGFDAAAPSAWIAEGLLIYLPATAQERLFTGIDALAGRRSHVAVEDGAPMGPDEYAAKVEEERAAIAEGAEEHPFFQLVYNERCAPAAEWFGERGWTAVATLLNDYLEAVGRPVPGPESEAGPMFARNTLVSAARV
>NZ_CP012506.2|WP_003401463.1|340488_342384_+|type-VII-secretion-system-ESX-3-AAA-family-ATPase-EccA3
MAGVGAGDSGGVERDDIGMVAASPVASRVNGKVDADVVGRFATCCRALGIAVYQRKRPPDLAAARSGFAALTRVAHDQCDAWTGLAAAGDQSIGVLEAASRTATTAGVLQRQVELADNALGFLYDTGLYLRFRATGPDDFHLAYAAALASTGGPEEFAKANHVVSGITERRAGWRAARWLAVVINYRAERWSDVVKLLTPMVNDPDLDEAFSHAAKITLGTALARLGMFAPALSYLEEPDGPVAVAAVDGALAKALVLRAHVDEESASEVLQDLYAAHPENEQVEQALSDTSFGIVTTTAGRIEARTDPWDPATEPGAEDFVDPAAHERKAALLHEAELQLAEFIGLDEVKRQVSRLKSSVAMELVRKQRGLTVAQRTHHLVFAGPPGTGKTTIARVVAKIYCGLGLLKRENIREVHRADLIGQHIGETEAKTNAIIDSALDGVLFLDEAYALVATGAKNDFGLVAIDTLLARMENDRDRLVVIIAGYRADLDKFLDTNEGLRSRFTRNIDFPSYTSHELVEIAHKMAEQRDSVFEQSALHDLEALFAKLAAESTPDTNGISRRSLDIAGNGRFVRNIVERSEEEREFRLDHSEHAGSGEFSDEELMTITADDVGRSVEPLLRGLGLSVRA
>NZ_CP012506.2|WP_003401472.1|342380_343997_+|type-VII-secretion-system-ESX-3-subunit-EccB3
MTNQQHDHDFDHDRRSFASRTPVNNNPDKVVYRRGFVTRHQVTGWRFVMRRIAAGIALHDTRMLVDPLRTQSRAVLMGVLIVITGLIGSFVFSLIRPNGQAGSNAVLADRSTAALYVRVGEQLHPVLNLTSARLIVGRPVSPTTVKSTELDQFPRGNLIGIPGAPERMVQNTSTDANWTVCDGLNAPSRGGADGVGVTVIAGPLEDTGARAAALGPGQAVLVDSGAGTWLLWDGKRSPIDLADHAVTSGLGLGADVPAPRIIASGLFNAIPEAPPLTAPIIPDAGNPASFGVPAPIGAVVSSYALKDSGKTISDTVQYYAVLPDGLQQISPVLAAILRNNNSYGLQQPPRLGADEVAKLPVSRVLDTRRYPSEPVSLVDVTRDPVTCAYWSKPVGAATSSLTLLAGSALPVPDAVHTVELVGAGNGGVATRVALAAGTGYFTQTVGGGPDAPGAGSLFWVSDTGVRYGIDNEPQGVAGGGKAVEALGLNPPPVPIPWSVLSLFVPGPTLSRADALLAHDTLVPDSRPARPVSAEGGYR
>NZ_CP012506.2|WP_003401478.1|343993_347986_+|type-VII-secretion-system-ESX-3-FtsK/SpoIIIE-family-ATPase-EccC3
MSRLIFEARRRLAPPSSHQGTIIIEAPPELPRVIPPSLLRRALPYLIGILIVGMIVALVATGMRVISPQTLFFPFVLLLAATALYRGNDKKMRTEEVDAERADYLRYLSVVRDNIRAQAAEQRASALWSHPDPTALASVPGSRRQWERDPHDPDFLVLRAGRHTVPLATTLRVNDTADEIDLEPVSHSALRSLLDTQRSIGDVPTGIDLTKVSRITVLGERAQVRAVLRAWIAQAVTWHDPTVLGVALAARDLEGRDWNWLKWLPHVDIPGRLDALGPARNLSTDPDELIALLGPVLADRPAFTGQPTDALRHLLIVVDDPDYDLGASPLAVGRAGVTVVHCSASAPHREQYSDPEKPILRVAHGAIERWQTGGWQPYIDAADQFSADEAAHLARRLSRWDSNPTHAGLRSAATRGASFTTLLGIEDASRLDVPALWAPRRRDEELRVPIGVTGTGEPLMFDLKDEAEGGMGPHGLMIGMTGSGKSQTLMSILLSLLTTHSAERLIVIYADFKGEAGADSFRDFPQVVAVISNMAEKKSLADRFADTLRGEVARREMLLREAGRKVQGSAFNSVLEYENAIAAGHSLPPIPTLFVVADEFTLMLADHPEYAELFDYVARKGRSFRIHILFASQTLDVGKIKDIDKNTAYRIGLKVASPSVSRQIIGVEDAYHIESGKEHKGVGFLVPAPGATPIRFRSTYVDGIYEPPQTAKAVVVQSVPEPKLFTAAAVEPDPGTVIADTDEQEPADPPRKLIATIGEQLARYGPRAPQLWLPPLDETIPLSAALARAGVGPRQWRWPLGEIDRPFEMRRDPLVFDARSSAGNMVIHGGPKSGKSTALQTFILSAASLHSPHEVSFYCLDYGGGQLRALQDLAHVGSVASALEPERIRRTFGELEQLLLSRQQREVFRDRGANGSTPDDGFGEVFLVIDNLYGFGRDNTDQFNTRNPLLARVTELVNVGLAYGIHVIITTPSWLEVPLAMRDGLGLRLELRLHDARDSNVRVVGALRRPADAVPHDQPGRGLTMAAEHFLFAAPELDAQTNPVAAINARYPGMAAPPVRLLPTNLAPHAVGELYRGPDQLVIGQREEDLAPVILDLAANPLLMVFGDARSGKTTLLRHIIRTVREHSTADRVAFTVLDRRLHLVDEPLFPDNEYTANIDRIIPAMLGLANLIEARRPPAGMSAAELSRWTFAGHTHYLIIDDVDQVPDSPAMTGPYIGQRPWTPLIGLLAQAGDLGLRVIVTGRATGSAHLLMTSPLLRRFNDLQATTLMLAGNPADSGKIRGERFARLPAGRAILLTDSDSPTYVQLINPLVDAAAVSGETQQKGSQS
>NZ_CP012506.2|WP_003401485.1|347982_348291_+|type-VII-secretion-system-ESX-3-target-PE5
MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVEHAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATYGVVGG
>NZ_CP012506.2|WP_003401488.1|348293_349835_+|type-VII-secretion-system-ESX-3-target-PPE4
MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAWQGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIHTVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNPGGGAASTVGAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQDPIGNSIKIIIAFLTNPIQALITYGPLLFALGYQIFFNLVGWPTWGMILSSPFLLPAGLGLGLAAIAFLPIVLAPAVIPPASTPLAAAAVAAGSVWPAVSMAVTGAGTAGAATPAAGAAPSAGAAPAPAAPATASFAYAVGGSGDWGPSLGPTVGGRGGIKAPAATVPAAAAAAATRGQSRARRRRRSELRDYGDEFLDMDSDSGFGPSTGDHGAQASERGAGTLGFAGTATKERRVRAVGLTALAGDEFGNGPRMPMVPGTWEQGSNEPEAPDGSGRGGGDGLPHDSK
>NZ_CP012506.2|WP_003401503.1|349883_350177_+|type-VII-secretion-system-protein-EsxG
MSLLDAHIPQLVASQSAFAAKAGLMRHTIGQAEQAAMSAQAFHQGESSAAFQAAHARFVAAAAKVNTLLDVAQANLGEAAGTYVAADAAAASTYTGF
>NZ_CP012506.2|WP_003401514.1|350206_350497_+|WXG100-family-type-VII-secretion-target
MSQIMYNYPAMLGHAGDMAGYAGTLQSLGAEIAVEQAALQSAWQGDTGITYQAWQAQWNQAMEDLVRAYHAMSSTHEANTMAMMARDTAEAAKWGG

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Crispr_ID: NZ_CP012506_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012506_1

331911-332709

Orphan

Consensus_repeat	Method
CCGCCGGNGCCGCCGGNN	CRT

15 spacers

The CRISPR arrays of NZ_CP012506_1

>merge|NZ_CP012506|1|331911-332709|CRT
CCGCCGGTACCGGCGCCAAACCCGCCGGCAACCCCCGTCACCGCCGTTGCCGAACACCCCGGCGTGGCCACCGTCACCGCCGGTGCCGCCGGTACCGGCGCCTAGAGCGTTGGCACCGCTGCCGCCGGCGCCGCCGGCGCCGGCGGAGCCGAAGAGCAAGCCGCCGTTCCCGCCGGCGCCGCCGGCGCCGCCTTGCTGGATGCTGGTAAGTGCTGCCCCGCCGTGCCCGCCGGCGCCGCCGGCGCCGCCGAAGCCGAAGAGTAAGGCGCCGTTCCCGCCGGTTCCGCCGGCCCCGCCGGCAAGGGAGCTGGCGCCACCGCTGCCGCCGGCGCCACCGGAGGCGCCGAGGGAGAGTAGGCCGGCGTTGCCGCCGTGCCCGCCGCCGCCGGTGGTGATCCCGGACCCTCCCGAGCCGGCGGCGCCGCCGGTGCCGCCGGCTCCGAACAGTCCGCCGTTCCCGCCGTTCCCACCGGCCCCGAAGTTCGTGCCGGCCCCGCCGGTGCCGCCAGTTCCGAACAGTCCGCCGTTCCCGCCGTTCCCGCCGGCTGCGTTGAACCCGCCGGCCCCTCCGGCTCCGCCGTTGGCGAACAGTCCGCCGTTGCCGCCGGCGCCGCCGACGCCGGCCGGGACACCGCCAGCGGCGCCGTGGCCGCCGGTGCCGGCCGCGCCGAAGAGCAAACCGGCGTCGCCGCCGCGCCCGCCGGCCCCGCCGATGCCAGCGACGCCTATGGAGTTCCCACCGTTGCCGCCGGTGCCGCCGGAGCCGATCAGCAAGGAGACCCCACCGGCGCCGCCGGCC

>NZ_CP012506|1|1|331911-332709|CRT
CCGCCGGTACCGGCGCCA	AACCCGCCGGCAACCCCCGTCACCGCCGTTGCCGAACACCCCGGCGTGGCCACCGTCA
CCGCCGGTGCCGCCGGTA	CCGGCGCCTAGAGCGTTGGCACCGCTG
CCGCCGGCGCCGCCGGCG	CCGGCGGAGCCGAAGAGCAAGCCGCCGTTC
CCGCCGGCGCCGCCGGCG	CCGCCTTGCTGGATGCTGGTAAGTGCTGCCCCGCCGTGC
CCGCCGGCGCCGCCGGCG	CCGCCGAAGCCGAAGAGTAAGGCGCCGTTCCCGCCGGTT
CCGCCGGCCCCGCCGGCA	AGGGAGCTGGCGCCACCGCTG
CCGCCGGCGCCACCGGAG	GCGCCGAGGGAGAGTAGGCCGGCGTTGCCGCCGTGC
CCGCCGCCGCCGGTGGTG	ATCCCGGACCCTCCCGAG
CCGGCGGCGCCGCCGGTG	CCGCCGGCTCCGAACAGTCCGCCGTTCCCGCCGTTCCCACCGGCCCCGAAGTTC
GTGCCGGCCCCGCCGGTG	CCGCCAGTTCCGAACAGTCCGCCGTTCCCGCCGTTCCCGCCGGCTGCGTTGAAC
CCGCCGGCCCCTCCGGCT	CCGCCGTTGGCGAACAGTCCGCCGTTG
CCGCCGGCGCCGCCGACG	CCGGCCGGGACACCGCCAGCGGCGCCGTGG
CCGCCGGTGCCGGCCGCG	CCGAAGAGCAAACCGGCGTCGCCGCCGCGCCCGCCGGCC
CCGCCGATGCCAGCGACG	CCTATGGAGTTCCCACCGTTG
CCGCCGGTGCCGCCGGAG	CCGATCAGCAAGGAGACC
CCACCGGCGCCGCCGGCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012506.2\|WP_003401397.1\|327971_328592_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP012506.2\|WP_003401404.1\|330014_330935_+\|DUF2236-domain-containing-protein	unknown	unknown	gnl\|CDD\|226188
NZ_CP012506.2\|WP_003401478.1\|343993_347986_+\|type-VII-secretion-system-ESX-3-FtsK/SpoIIIE-family-ATPase-EccC3	unknown	unknown	gnl\|CDD\|274858
NZ_CP012506.2\|WP_003902643.1\|337722_339333_+\|PPE-family-protein	unknown	unknown	gnl\|CDD\|227938
NZ_CP012506.2\|WP_003401386.1\|321605_322799_-\|DNA-polymerase-domain-containing-protein	unknown	unknown	gnl\|CDD\|225823
NZ_CP012506.2\|WP_025096313.1\|326799_327975_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|378820
NZ_CP012506.2\|WP_003401392.1\|324533_326729_-\|acyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|173841
NZ_CP012506.2\|WP_003401448.1\|339356_340265_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|225852
NZ_CP012506.2\|WP_011961607.1\|331426_331609_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012506.2\|WP_003899886.1\|329199_329925_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP012506.2\|WP_003401488.1\|348293_349835_+\|type-VII-secretion-system-ESX-3-target-PPE4	unknown	unknown	gnl\|CDD\|227938
NZ_CP012506.2\|WP_003401463.1\|340488_342384_+\|type-VII-secretion-system-ESX-3-AAA-family-ATPase-EccA3	unknown	unknown	gnl\|CDD\|188437
NZ_CP012506.2\|WP_003401399.1\|328688_329270_+\|VOC-family-protein	unknown	unknown	gnl\|CDD\|366361
NZ_CP012506.2\|WP_003401406.1\|330974_331403_-\|type-II-toxin-antitoxin-system-VapC-family-toxin	unknown	unknown	gnl\|CDD\|350245
NZ_CP012506.2\|WP_003899884.1\|322834_324517_+\|acyl-CoA-synthetase	unknown	unknown	gnl\|CDD\|236097
NZ_CP012506.2\|WP_003401503.1\|349883_350177_+\|type-VII-secretion-system-protein-EsxG	unknown	unknown	gnl\|CDD\|274862
NZ_CP012506.2\|WP_003401514.1\|350206_350497_+\|WXG100-family-type-VII-secretion-target	unknown	unknown	gnl\|CDD\|227179
NZ_CP012506.2\|WP_031660215.1\|334774_337432_-\|PE-family-protein	unknown	unknown	gnl\|CDD\|376422
NZ_CP012506.2\|WP_003401485.1\|347982_348291_+\|type-VII-secretion-system-ESX-3-target-PE5	unknown	unknown	gnl\|CDD\|376422
NZ_CP012506.2\|WP_003401472.1\|342380_343997_+\|type-VII-secretion-system-ESX-3-subunit-EccB3	unknown	unknown	gnl\|CDD\|368288

Protein	Function_ID	Function_description	E-value
NZ_CP012506.2\|WP_003401397.1\|327971_328592_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	6.87158e-12
NZ_CP012506.2\|WP_003401404.1\|330014_330935_+\|DUF2236-domain-containing-protein	gnl\|CDD\|226188	COG3662, COG3662, Uncharacterized protein conserved in bacteria [Function unknown].	2.89836e-118
NZ_CP012506.2\|WP_003401478.1\|343993_347986_+\|type-VII-secretion-system-ESX-3-FtsK/SpoIIIE-family-ATPase-EccC3	gnl\|CDD\|274858	TIGR03924, T7SS_EccC_a, type VII secretion protein EccCa. This model represents the N-terminal domain or EccCa subunit of the type VII secretion protein EccC as found in the Actinobacteria. Type VII secretion is defined more broadly as including secretion systems for ESAT-6-like proteins in the Firmicutes as well as in the Actinobacteria, but this family does not show close homologs in the Firmicutes. [Protein fate, Protein and peptide secretion and trafficking].	0
NZ_CP012506.2\|WP_003401386.1\|321605_322799_-\|DNA-polymerase-domain-containing-protein	gnl\|CDD\|225823	COG3285, COG3285, Predicted eukaryotic-type DNA primase [DNA replication, recombination, and repair].	2.78761e-127
NZ_CP012506.2\|WP_003902643.1\|337722_339333_+\|PPE-family-protein	gnl\|CDD\|227938	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion].	1.75244e-73
NZ_CP012506.2\|WP_025096313.1\|326799_327975_-\|alpha/beta-hydrolase	gnl\|CDD\|378820	pfam12146, Hydrolase_4, Serine aminopeptidase, S33. This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. It is found in association with pfam00561. The majority of the members in this family carry the exopeptidase active-site residues of Ser-122, Asp-239 and His-269 as in UniProtKB:Q7ZWC2.	0.0018025
NZ_CP012506.2\|WP_003401392.1\|324533_326729_-\|acyl-CoA-dehydrogenase	gnl\|CDD\|173841	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26. Putative acyl-CoA dehydrogenases (ACAD). Mitochondrial acyl-CoA dehydrogenases (ACAD) catalyze the alpha, beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of ACAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. The ACD family includes the eukaryotic beta-oxidation, as well as amino acid catabolism enzymes. These enzymes share high sequence similarity, but differ in their substrate specificities. The mitochondrial ACD's are generally homotetramers and have an active site glutamate at a conserved position.	1.76306e-158
NZ_CP012506.2\|WP_003401448.1\|339356_340265_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|225852	COG3315, COG3315, O-Methyltransferase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism].	1.10201e-94
NZ_CP012506.2\|WP_003899886.1\|329199_329925_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	7.66172e-07
NZ_CP012506.2\|WP_003401488.1\|348293_349835_+\|type-VII-secretion-system-ESX-3-target-PPE4	gnl\|CDD\|227938	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion].	1.09345e-59
NZ_CP012506.2\|WP_003401463.1\|340488_342384_+\|type-VII-secretion-system-ESX-3-AAA-family-ATPase-EccA3	gnl\|CDD\|188437	TIGR03922, T7SS_EccA, type VII secretion AAA-ATPase EccA. This model represents the AAA family ATPase, EccA, of the actinobacterial flavor of type VII secretion systems. Species such as Mycobacterium tuberculosis have several instances of this system per genome, designated EccA1, EccA2, etc. [Protein fate, Protein and peptide secretion and trafficking].	0
NZ_CP012506.2\|WP_003401399.1\|328688_329270_+\|VOC-family-protein	gnl\|CDD\|366361	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily.	5.1808e-20
NZ_CP012506.2\|WP_003401406.1\|330974_331403_-\|type-II-toxin-antitoxin-system-VapC-family-toxin	gnl\|CDD\|350245	cd18678, PIN_MtVapC25_VapC33-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC25, VapC33, and related proteins. This subfamily includes the Virulence associated protein C (VapC)-like PIN (PilT N terminus) domain of Mycobacterium tuberculosis VapC25, VapC29, VapC33, VapC37, and VapC39 toxins. It belongs to the VapC-like family of the PIN domain nuclease superfamily. VapC is a PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include FitB toxin of the FitAB TA system, eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The structural properties of the PIN domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions; in some members, additional metal coordinating residues can be found while some others lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	2.23805e-60
NZ_CP012506.2\|WP_003899884.1\|322834_324517_+\|acyl-CoA-synthetase	gnl\|CDD\|236097	PRK07788, PRK07788, acyl-CoA synthetase; Validated.	0
NZ_CP012506.2\|WP_003401503.1\|349883_350177_+\|type-VII-secretion-system-protein-EsxG	gnl\|CDD\|274862	TIGR03930, WXG100_ESAT6, WXG100 family type VII secretion target. Members of this protein family include secretion targets for the two main variants of type VII secretion systems (T7SS), one found in the Actinobacteria, one found in the Firmicutes. This model was derived through iteration from pfam06013. The best characterized member of this family is ESAT-6 from Mycobacterium tuberculosis. Members of this family usually are ~100 amino acids in length but occasionally have a long C-terminal extension.	0.00514324
NZ_CP012506.2\|WP_003401514.1\|350206_350497_+\|WXG100-family-type-VII-secretion-target	gnl\|CDD\|227179	COG4842, COG4842, Uncharacterized protein conserved in bacteria [Function unknown].	2.85211e-21
NZ_CP012506.2\|WP_031660215.1\|334774_337432_-\|PE-family-protein	gnl\|CDD\|376422	pfam00934, PE, PE family. This family named after a PE motif near to the amino terminus of the domain. The PE family of proteins all contain an amino-terminal region of about 110 amino acids. The carboxyl terminus of this family are variable and fall into several classes. The largest class of PE proteins is the highly repetitive PGRS class which have a high glycine content. The function of these proteins is uncertain but it has been suggested that they may be related to antigenic variation of Mycobacterium tuberculosis.	1.72556e-32
NZ_CP012506.2\|WP_003401485.1\|347982_348291_+\|type-VII-secretion-system-ESX-3-target-PE5	gnl\|CDD\|376422	pfam00934, PE, PE family. This family named after a PE motif near to the amino terminus of the domain. The PE family of proteins all contain an amino-terminal region of about 110 amino acids. The carboxyl terminus of this family are variable and fall into several classes. The largest class of PE proteins is the highly repetitive PGRS class which have a high glycine content. The function of these proteins is uncertain but it has been suggested that they may be related to antigenic variation of Mycobacterium tuberculosis.	7.41358e-11
NZ_CP012506.2\|WP_003401472.1\|342380_343997_+\|type-VII-secretion-system-ESX-3-subunit-EccB3	gnl\|CDD\|368288	pfam05108, T7SS_ESX1_EccB, Type VII secretion system ESX-1, transport TM domain B. EccB is a family of largely Gram-positive bacterial transmembrane componenets of the type VII secretion system characterized in Mycobacterium tuberculosis, systems ESX1-5. Translocation of virulent peptides through the membranes is thought to be mediated via a complex that includes EccB, EccC, EccD, EccE, and MycP. EccB, EccC, EccD, and EccE form a stable complex in the mycobacterial cell envelope.	0

>NZ_CP012506.2|WP_011961607.1|331426_331609_-|hypothetical-protein
MGAVIEDALRRELAAARTGGARPTVPVFDAGTGPRPGIDLTSNTVLSEVLDEGLELNSRK
>NZ_CP012506.2|WP_003401406.1|330974_331403_-|type-II-toxin-antitoxin-system-VapC-family-toxin
MFLIDVNVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLTTNRRIFEIPSPRADAFAFVEAVNAQPHHLPTSPGPRHLVLLRKLCDEADASGDLIPDAVLGAIAVEHHCAVVSLDRDFARFASVRHIRPPI
>NZ_CP012506.2|WP_003401404.1|330014_330935_+|DUF2236-domain-containing-protein
MAISLVAHQPIPHVERPMADPPRLQLARRRRSAAGPGGNEDSLMGVALLAGPANVIMELAMPGVGYGVLESRVESGRLDRHPIKRARTTFTYVAVAVAGSDDQKAAFRRAVNKVHAQVYSTPESPVSYHAFDPELQLWVAACLYKGGVDVYRTFVGEMDDEEADHHYRAGMAMGTTLQVPPQMWPPDRAAFDRYWRQSLDRVHIDDVVRDYLYPIVALRIRGIALPGPLRRLSEGIALLITTGFLPQRFRDEMRLPWDATKQRRFDALMAVLRTVNRLMPRFVREFPFNLMLWDLDRRMRRGRPLV
>NZ_CP012506.2|WP_003899886.1|329199_329925_-|TetR/AcrR-family-transcriptional-regulator
MTRSDRPYRGVEAAERLATRRRQSLSAGLDLLGSDQHDIAELTIRTICRRAGLSVRYFYESFTDKDEFVGRVFDWVVAELVATTQAAVTAVPAREQTRAGMANIVRTITADARVGRLLFSTQLANAVITRKRAESSALFAMLSGQHAVDTLHAPANDHVKAVAHFAVGGVGQTISAWLAGDVRLDPDQLVDQLAALLDELTDPNLSRPRVAATAAKSGANDPQPPEVAGQPPSSARPARRS
>NZ_CP012506.2|WP_003401399.1|328688_329270_+|VOC-family-protein
MIKPHNTNTEFELGGINHVALVCSDMARTVDFYSNILGMPLIKALDLPGGQGQHFFFDAGNGDCVAFFWFADAPDRVPGLSSPVAIPGIGDITSAVSTMNHLAFHVPAERFDAYRQRLKDKGVRVGPVLNHDDSETQVSAVVHPGVYVRSFYFQDPDGITLEFACWTKEFTTSDAQAVPKTAADRRPPVAADR
>NZ_CP012506.2|WP_003401397.1|327971_328592_-|TetR/AcrR-family-transcriptional-regulator
MPDFPTQRGRRTQAAIDAAARTVVVRNGILATTVADITAEAGRSAASFYNYYDSKEAMVRQWALRFRDDANQRALSVIRHGLSDRERAYEAAAAHWYTYRNRLAEAISVSQLAMVSDDFAQYWSEICQIPISFITETVKRAQAHGYCVGDDPQLMAEAIVAMFNQFCYLQLSGKRSRRGQPDDQACIQTLANIYYRAIYSKEDSSN
>NZ_CP012506.2|WP_025096313.1|326799_327975_-|alpha/beta-hydrolase
MTGRAATPGVIREFVGLPSRTAGRAAAGGHPCQGLYHHSVGRKPKVALIAAHYQIDFSEHYLAEYMAIRGIGFLGWNTRFRGFESSFLLDHALVDIGVGVRWLREVQGVETVVLLGNSGGGSLMAAYQSQAVDPNVTPLDGMRPAAGVTELPAADAYVAAAAHPGRPDVLTAWMDAAVIDENDPVATDPELDLFDERNGPPYSPEFISRYRSAQVKRNHTITDWAESELKRVRAAGFSDRPFSVMRTWADPRMVDPSIEPTKRRPNQCYAGTPVKANRSAHGIAAACTLRGWLGMWSLRVAQTRAAPHLARITCPALVLNAEADTGIFPSDAQQIYDGLASSDKTQVSIDTDHYFTTPGARSEQADTIAKWIASGGAECSHPFRRPSASQR
>NZ_CP012506.2|WP_003401392.1|324533_326729_-|acyl-CoA-dehydrogenase
MSIAITPEHYELADSVRSLVARVAPSEVLHAALESPVENPPPYWQAAAEQGLQGVHLAESVGGQGFGILELAVVLAEFGYGAVPGPFVPSAIASALIAAHDPQAKVLAELATGAAIAAYALDSGLTATRHGDVLVIRGEVRAVPAAAQASVLVLPVAIESRDEWVVLRNDQLEIEAVKSLDPLRPIAHVRANAVDVSDDALLSNLTMTTAHALMSTLLSAEAVGVARWATDTASAYAKIREQFGRPIGQFQAIKHKCAEMIADTERATAAVWDAARALDDAGESSSDVEFAAAVAATLAPATAQRCTQDCIQVHGGIGFTWEHDTNVYYRRALMLAACFGRGSEYPQRVVDTATTAGMRPVDIDLDPSTEKLRAQIRAEVAALKAMPREPRTVAIAEGGWVLPYLPKPWGRAASPVEQIIIAQEFTAGRVKRPQIAIATWIVPSIVAFGTDNQKQRLLPPTFRGDIFWCQLFSEPGAGSDLASLATKATRVDGGWRITGQKIWTTGAQYSQWGALLARTDPSAPKHNGITYFLLDMKSEGVQVKPLRELTGKEFFNTVYLDDVFVPDELVLGEVNRGWEVSRNTLTAERVSIGGSDSTFLPTLGEFVDFVRDYRFEGQFDQVARHRAGQLIAEGHATKLLNLRSTLLTLAGGDPMAPAAISKLLSMRTGQGYAEFAVSSFGTDAVIGDTERLPGKWGEYLLASRATTIYGGTSEVQLNIIAERLLGLPRDP
>NZ_CP012506.2|WP_003899884.1|322834_324517_+|acyl-CoA-synthetase
MPNLTDLPGQAVSKLQKSIGQYVARGTAELHYLRKIIESGAIGLEPPLNYAALAADIRKWGEVGMLPSHNARRAPNRAAVIDEEGTLTFSELDEAAHAVANGLLAKGVRAGDGVAILARNHRWFVIANYGAARVGARIILLNSEFSGPQIKEVSDREGAKVIIYDDEYTKAVSLAQPPLGKLRALGVNPDDDKPSGSSDETLAELIAHSSTAPAPKASRRASIIILTSGTTGTPKGANRNTPPTLAPIGGILSHVPFKAGEVTLLPSPMFHALGYMHAALAMFLGSTLVLRRRFKPALVLEDIEKHKATSMVVVPVMLSRILDQLEKTEPKPDLSSLKIVFVSGSQLGAELATRALGDLGPVIYNMYGSTEVAFATIAGPKDLQFNPSTVGPVVKGVTVKILDENGNEVPQGAVGRIFVGNAFPFEGYTGGGGKQIIDGLLSSGDVGYFDERGLLYVSGRDDEMIVSGGENVFPAEVEDLISGHPDVVEAAAIGVDDKEFGARLRAFVVKKPGADLDEDTIKQYVRDHLARYKVPREVIFLDELPRNPTGKVLKRELRKL
>NZ_CP012506.2|WP_003401386.1|321605_322799_-|DNA-polymerase-domain-containing-protein
MSRMAAPVSLDVHGRQVIVTHPGRVVFPAHNDRKGYTKFDLVRYYLAVAEGAMRGVAGRPMILKRFVKGISAEAVFQKRAPANRPDWVDVAELHYASGRSAAEAVIHDAAGLAWVINLGCVDLNPHPVLAGDLDHPDELRVDLDPMPGVAWQRVVEVALVVREVLEDYGLTAWPKTSGSRGFHVYARIAPCWSFPQVRLAAQTVAREVERRLPDAATSRWWKEEREGVFVDFNQNAKDRTVASAYSVRATPDARVSTPLHWEEVPGCDPAVFTMATVPSRLADIGDPWAGMDDAVGRLDRLLMLAEELGPPQKAQSAKPLIEIARAKTRAEAMAALDIWRDRYPGAAALLRPADVLVDGMRGPSSIWYRIRINLQHVPADQRPPQEELIADYSPWPR
>NZ_CP012506.2|WP_031660215.1|334774_337432_-|PE-family-protein
MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQAYQALSAQAQAFHAQFTQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGTNGAPGTGANGGDGGWLIGNGGAGGSGAAGVNGGAGGNGGAGGLIGNGGAGGAGGVASSGIGGSGGAGGNAMLFGAGGAGGAGGAGGNAGLLFGAAGVGGAGGFTNGSALGGAGGAGGAGGLFATGGVGGSGGAGSSGGAGGAGGAGGLFGAGGTGGHGGFADSSFGGVGGAGGAGGLFGAGGEGGSGGHSLVAGGDGGAGGNAGMLALGAAGGAGGIGGDGGTLTAGGIGGAGGAGGNAGLLFGSGGSGGAGGFGFADGGQGGPGGNAGTVFGSGGAGGNGGVGQGFAGGIGGAGGTPGLIGNGGNGGNGGASAVTGGNGGIGGTGVLIGNGGNGGSGGIGAGKAGVGGVSGLLLGLDGFNAPASTSPLHTLQQNVLNVVNEPFQTLTGRPLIGNGANGTPGTGADGGAGGWLFGNGGNGGSGATGTNGGDGGDGGAGGIFFGTGGTGGAGGVGTTGTGGDGGAGGAAFLMGSGGNGGSGGAGLTAGGDGGDGGNAGSFFGAAGTGGAGASTKAGGTGGTGGNGGLFANGGAGGSGGLGGDAGTGGAGGNGGLFGAGGTGGAGGSLGPGAGGAGGNGGLFGAGGTGGSGGHGTPAAVPGGAGGAGGNAGLFSLGASGGAGGSGGSSLTDGGGIGGVGGAGGLLFGYGGAGGAGGYSNIGAGGAGGAGGNAGMLSGSGGSGGTGGASGAAKGGVGGNGGTAGVFGNGGDGGAGGFGAGTGGNGGVGGNAVLIGNGGNGGNGGKAGGTPGAGGTSGLLIGENGLNGLP
>NZ_CP012506.2|WP_003902643.1|337722_339333_+|PPE-family-protein
MTLWMASPPEVHSALLSSGPGPGSVLSAAGVWSSLSAEYAAVADELIGLLGAVQTGAWQGPSAAAYVAAHAPYLAWLMRASETSAEAAARHETVAAAYTTAVAAMPTLVELAANHTLHGVLVATNFFGINTIPIALNEADYARMWTQAASTMATYQAVAEAAVASAPQTTPAPPILAAEAADDDHDHDHDHGGEPTPLDYLVAEILRIISGGRLIWDPAEGTMNGIPFEDYTDAAQPIWWVVRAIEFSKDFETFVQKLFVNPVEAFQFYFELLLFDYPTHIVQIVEALSQSPQLLAVALGSVISNLGAVTGFAGLSGLAGMQPAAIPALAPVAAAPPTLPAVAMAPTMAAPGAAVASAAAPASAPAASTVASATPAPPPAPGAAGFGYPYAIAPPGIGFGSGMSASASAQRKAPQPDSAAAAAAAAAVRDQARARRRRRVTRRGYGDEFMDMNIDVDPDWGPPPGEDPVTSTVASDRGAGHLGFAGTARREAVADAAGMTTLAGDDFGDGPTTPMVPGSWDPDRDAPGSAEPGDRG
>NZ_CP012506.2|WP_003401448.1|339356_340265_+|class-I-SAM-dependent-methyltransferase
MRTEGDSWDITTSVGSTALFVATARALEAQKSDPLVVDPYAEAFCRAVGGSWADVLDGKLPDHKLKSTDFGEHFVNFQGARTKYFDEYFRRAAAAGARQVVILAAGLDSRAYRLPWPDGTTVFELDRPQVLDFKREVLASHGAQPRALRREIAVDLRDDWPQALRDSGFDAAAPSAWIAEGLLIYLPATAQERLFTGIDALAGRRSHVAVEDGAPMGPDEYAAKVEEERAAIAEGAEEHPFFQLVYNERCAPAAEWFGERGWTAVATLLNDYLEAVGRPVPGPESEAGPMFARNTLVSAARV
>NZ_CP012506.2|WP_003401463.1|340488_342384_+|type-VII-secretion-system-ESX-3-AAA-family-ATPase-EccA3
MAGVGAGDSGGVERDDIGMVAASPVASRVNGKVDADVVGRFATCCRALGIAVYQRKRPPDLAAARSGFAALTRVAHDQCDAWTGLAAAGDQSIGVLEAASRTATTAGVLQRQVELADNALGFLYDTGLYLRFRATGPDDFHLAYAAALASTGGPEEFAKANHVVSGITERRAGWRAARWLAVVINYRAERWSDVVKLLTPMVNDPDLDEAFSHAAKITLGTALARLGMFAPALSYLEEPDGPVAVAAVDGALAKALVLRAHVDEESASEVLQDLYAAHPENEQVEQALSDTSFGIVTTTAGRIEARTDPWDPATEPGAEDFVDPAAHERKAALLHEAELQLAEFIGLDEVKRQVSRLKSSVAMELVRKQRGLTVAQRTHHLVFAGPPGTGKTTIARVVAKIYCGLGLLKRENIREVHRADLIGQHIGETEAKTNAIIDSALDGVLFLDEAYALVATGAKNDFGLVAIDTLLARMENDRDRLVVIIAGYRADLDKFLDTNEGLRSRFTRNIDFPSYTSHELVEIAHKMAEQRDSVFEQSALHDLEALFAKLAAESTPDTNGISRRSLDIAGNGRFVRNIVERSEEEREFRLDHSEHAGSGEFSDEELMTITADDVGRSVEPLLRGLGLSVRA
>NZ_CP012506.2|WP_003401472.1|342380_343997_+|type-VII-secretion-system-ESX-3-subunit-EccB3
MTNQQHDHDFDHDRRSFASRTPVNNNPDKVVYRRGFVTRHQVTGWRFVMRRIAAGIALHDTRMLVDPLRTQSRAVLMGVLIVITGLIGSFVFSLIRPNGQAGSNAVLADRSTAALYVRVGEQLHPVLNLTSARLIVGRPVSPTTVKSTELDQFPRGNLIGIPGAPERMVQNTSTDANWTVCDGLNAPSRGGADGVGVTVIAGPLEDTGARAAALGPGQAVLVDSGAGTWLLWDGKRSPIDLADHAVTSGLGLGADVPAPRIIASGLFNAIPEAPPLTAPIIPDAGNPASFGVPAPIGAVVSSYALKDSGKTISDTVQYYAVLPDGLQQISPVLAAILRNNNSYGLQQPPRLGADEVAKLPVSRVLDTRRYPSEPVSLVDVTRDPVTCAYWSKPVGAATSSLTLLAGSALPVPDAVHTVELVGAGNGGVATRVALAAGTGYFTQTVGGGPDAPGAGSLFWVSDTGVRYGIDNEPQGVAGGGKAVEALGLNPPPVPIPWSVLSLFVPGPTLSRADALLAHDTLVPDSRPARPVSAEGGYR
>NZ_CP012506.2|WP_003401478.1|343993_347986_+|type-VII-secretion-system-ESX-3-FtsK/SpoIIIE-family-ATPase-EccC3
MSRLIFEARRRLAPPSSHQGTIIIEAPPELPRVIPPSLLRRALPYLIGILIVGMIVALVATGMRVISPQTLFFPFVLLLAATALYRGNDKKMRTEEVDAERADYLRYLSVVRDNIRAQAAEQRASALWSHPDPTALASVPGSRRQWERDPHDPDFLVLRAGRHTVPLATTLRVNDTADEIDLEPVSHSALRSLLDTQRSIGDVPTGIDLTKVSRITVLGERAQVRAVLRAWIAQAVTWHDPTVLGVALAARDLEGRDWNWLKWLPHVDIPGRLDALGPARNLSTDPDELIALLGPVLADRPAFTGQPTDALRHLLIVVDDPDYDLGASPLAVGRAGVTVVHCSASAPHREQYSDPEKPILRVAHGAIERWQTGGWQPYIDAADQFSADEAAHLARRLSRWDSNPTHAGLRSAATRGASFTTLLGIEDASRLDVPALWAPRRRDEELRVPIGVTGTGEPLMFDLKDEAEGGMGPHGLMIGMTGSGKSQTLMSILLSLLTTHSAERLIVIYADFKGEAGADSFRDFPQVVAVISNMAEKKSLADRFADTLRGEVARREMLLREAGRKVQGSAFNSVLEYENAIAAGHSLPPIPTLFVVADEFTLMLADHPEYAELFDYVARKGRSFRIHILFASQTLDVGKIKDIDKNTAYRIGLKVASPSVSRQIIGVEDAYHIESGKEHKGVGFLVPAPGATPIRFRSTYVDGIYEPPQTAKAVVVQSVPEPKLFTAAAVEPDPGTVIADTDEQEPADPPRKLIATIGEQLARYGPRAPQLWLPPLDETIPLSAALARAGVGPRQWRWPLGEIDRPFEMRRDPLVFDARSSAGNMVIHGGPKSGKSTALQTFILSAASLHSPHEVSFYCLDYGGGQLRALQDLAHVGSVASALEPERIRRTFGELEQLLLSRQQREVFRDRGANGSTPDDGFGEVFLVIDNLYGFGRDNTDQFNTRNPLLARVTELVNVGLAYGIHVIITTPSWLEVPLAMRDGLGLRLELRLHDARDSNVRVVGALRRPADAVPHDQPGRGLTMAAEHFLFAAPELDAQTNPVAAINARYPGMAAPPVRLLPTNLAPHAVGELYRGPDQLVIGQREEDLAPVILDLAANPLLMVFGDARSGKTTLLRHIIRTVREHSTADRVAFTVLDRRLHLVDEPLFPDNEYTANIDRIIPAMLGLANLIEARRPPAGMSAAELSRWTFAGHTHYLIIDDVDQVPDSPAMTGPYIGQRPWTPLIGLLAQAGDLGLRVIVTGRATGSAHLLMTSPLLRRFNDLQATTLMLAGNPADSGKIRGERFARLPAGRAILLTDSDSPTYVQLINPLVDAAAVSGETQQKGSQS
>NZ_CP012506.2|WP_003401485.1|347982_348291_+|type-VII-secretion-system-ESX-3-target-PE5
MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVEHAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATYGVVGG
>NZ_CP012506.2|WP_003401488.1|348293_349835_+|type-VII-secretion-system-ESX-3-target-PPE4
MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAWQGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIHTVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNPGGGAASTVGAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQDPIGNSIKIIIAFLTNPIQALITYGPLLFALGYQIFFNLVGWPTWGMILSSPFLLPAGLGLGLAAIAFLPIVLAPAVIPPASTPLAAAAVAAGSVWPAVSMAVTGAGTAGAATPAAGAAPSAGAAPAPAAPATASFAYAVGGSGDWGPSLGPTVGGRGGIKAPAATVPAAAAAAATRGQSRARRRRRSELRDYGDEFLDMDSDSGFGPSTGDHGAQASERGAGTLGFAGTATKERRVRAVGLTALAGDEFGNGPRMPMVPGTWEQGSNEPEAPDGSGRGGGDGLPHDSK
>NZ_CP012506.2|WP_003401503.1|349883_350177_+|type-VII-secretion-system-protein-EsxG
MSLLDAHIPQLVASQSAFAAKAGLMRHTIGQAEQAAMSAQAFHQGESSAAFQAAHARFVAAAAKVNTLLDVAQANLGEAAGTYVAADAAAASTYTGF
>NZ_CP012506.2|WP_003401514.1|350206_350497_+|WXG100-family-type-VII-secretion-target
MSQIMYNYPAMLGHAGDMAGYAGTLQSLGAEIAVEQAALQSAWQGDTGITYQAWQAQWNQAMEDLVRAYHAMSSTHEANTMAMMARDTAEAAKWGG

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Crispr_ID: NZ_CP012506_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012506_3

336096-337064

Orphan

Consensus_repeat	Method
CCGCCGGCNCCGCCGNNGCCG	CRT

11 spacers

The CRISPR arrays of NZ_CP012506_3

>merge|NZ_CP012506|3|336096-337064|CRT
ACGCCGGTGCCGCCGATCCCGCCGTTGCCGCCGGTCACCGCGCTGGCGCCACCGTTACCGCCGTTGCCGCCGTTACCGATCAGCCCGGGGGTGCCGCCAGCCCCACCGATCCCGCCGGCGAAGCCCTGGCCAACTCCGCCGTTGCCGCCGGCGCCGCCGGAGCCGAAGACCGTGCCGGCGTTGCCCCCGGGGCCGCCTTGCCCGCCGTCGGCGAAGCCGAATCCGCCGGCGCCGCCGGAGCCGCCGGAGCCGAAGAGCAGCCCAGCGTTGCCGCCGGCGCCGCCGGCGCCGCCTATGCCGCCGGCCGTGAGAGTACCGCCGTCCCCACCGATTCCGCCGGCGCCGCCCGCGGCGCCGAGGGCGAGCATGCCGGCATTGCCGCCGGCCCCGCCGTCCCCGCCGGCGACCAGGCTGTGTCCGCCGCTGCCGCCTTCCCCGCCTGCGCCGAACAGCCCGCCGGCCCCGCCGGCCCCGCCGACTCCGCCGAAGCTGCTGTCGGCGAACCCGCCATGCCCGCCGGTGCCGCCGGCGCCGAACAGCCCGCCAGCGCCACCGGCCCCACCGGCCCCGCCGGAGCTGCCGGCCCCACCGGATCCGCCGACCCCGCCGGTGGCGAACAGCCCGCCGGCCCCGCCGGCGCCGCCCGCCCCGCCGAGTGCACTGCCGTTCGTGAATCCGCCGGCCCCGCCGACTCCGGCGGCGCCGAAGAGCAGGCCGGCGTTGCCGCCAGCCCCGCCGGCGCCGCCGGCCCCGCCGGCGCCGAACAGCATGGCGTTGCCGCCGGCTCCGCCGGACCCGCCGATCCCACTGCTGGCGACCCCGCCAGCGCCGCCGGCGCCGCCGTTGCCGATGAGCCCGCCGGCGCCGCCGTTGCCGCCGGCGCCGCCGTTGACGCCGGCCGCGCCGGATCCTCCGGCGCCGCCGTTGCCGATTAACCAGCCGCCGTCCCCGCCATTGGCCCCGGTGCCG

>NZ_CP012506|3|2|336096-337064|CRT
ACGCCGGTGCCGCCGATCCCG	CCGTTGCCGCCGGTCACCGCGCTGGCGCCACCGTTACCGCCGTTGCCGCCGTTACCGATCAGCCCGGGGGTGCCGCCAGCCCCACCGATCCCGCCGGCGAAGCCCTGGCCAACTCCGCCGTTG
CCGCCGGCGCCGCCGGAGCCG	AAGACCGTGCCGGCGTTGCCCCCGGGGCCGCCTTGCCCGCCGTCGGCGAAGCCGAATCCGCCGGCGCCGCCGGAGCCGCCGGAGCCGAAGAGCAGCCCAGCGTTG
CCGCCGGCGCCGCCGGCGCCG	CCTATGCCGCCGGCCGTGAGAGTACCGCCGTCCCCACCGATTCCGCCGGCGCCGCCCGCGGCGCCGAGGGCGAGCATGCCGGCATTG
CCGCCGGCCCCGCCGTCCCCG	CCGGCGACCAGGCTGTGTCCGCCGCTGCCGCCTTCCCCGCCTGCGCCGAACAGCCCGCCGGCCCCGCCGGCC
CCGCCGACTCCGCCGAAGCTG	CTGTCGGCGAACCCGCCATGCCCGCCGGTGCCGCCGGCGCCGAACAGCCCGCCAGCGCCACCGGCC
CCACCGGCCCCGCCGGAGCTG	CCGGCCCCACCGGATCCGCCGACCCCGCCGGTGGCGAACAGC
CCGCCGGCCCCGCCGGCGCCG	CCCGCCCCGCCGAGTGCACTGCCGTTCGTGAAT
CCGCCGGCCCCGCCGACTCCG	GCGGCGCCGAAGAGCAGGCCGGCGTTGCCGCCAGCCCCGCCGGCG
CCGCCGGCCCCGCCGGCGCCG	AACAGCATGGCGTTGCCGCCGGCTCCGCCGGACCCGCCGATCCCACTGCTGGCGACC
CCGCCAGCGCCGCCGGCGCCG	CCGTTGCCGATGAGCCCGCCGGCG
CCGCCGTTGCCGCCGGCGCCG	CCGTTGACGCCGGCCGCGCCGGATCCTCCGGCGCCGCCGTTGCCGATTAACCAGCCGCCGTCC
CCGCCATTGGCCCCGGTGCCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012506.2\|WP_003401397.1\|327971_328592_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP012506.2\|WP_003401404.1\|330014_330935_+\|DUF2236-domain-containing-protein	unknown	unknown	gnl\|CDD\|226188
NZ_CP012506.2\|WP_003401478.1\|343993_347986_+\|type-VII-secretion-system-ESX-3-FtsK/SpoIIIE-family-ATPase-EccC3	unknown	unknown	gnl\|CDD\|274858
NZ_CP012506.2\|WP_025202582.1\|331703_334511_-\|PE-family-protein	unknown	unknown	gnl\|CDD\|376422
NZ_CP012506.2\|WP_003902643.1\|337722_339333_+\|PPE-family-protein	unknown	unknown	gnl\|CDD\|227938
NZ_CP012506.2\|WP_025096313.1\|326799_327975_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|378820
NZ_CP012506.2\|WP_003401392.1\|324533_326729_-\|acyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|173841
NZ_CP012506.2\|WP_003401448.1\|339356_340265_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|225852
NZ_CP012506.2\|WP_011961607.1\|331426_331609_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012506.2\|WP_003899886.1\|329199_329925_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP012506.2\|WP_003401488.1\|348293_349835_+\|type-VII-secretion-system-ESX-3-target-PPE4	unknown	unknown	gnl\|CDD\|227938
NZ_CP012506.2\|WP_003401399.1\|328688_329270_+\|VOC-family-protein	unknown	unknown	gnl\|CDD\|366361
NZ_CP012506.2\|WP_003401406.1\|330974_331403_-\|type-II-toxin-antitoxin-system-VapC-family-toxin	unknown	unknown	gnl\|CDD\|350245
NZ_CP012506.2\|WP_003899884.1\|322834_324517_+\|acyl-CoA-synthetase	unknown	unknown	gnl\|CDD\|236097
NZ_CP012506.2\|WP_003401503.1\|349883_350177_+\|type-VII-secretion-system-protein-EsxG	unknown	unknown	gnl\|CDD\|274862
NZ_CP012506.2\|WP_003401514.1\|350206_350497_+\|WXG100-family-type-VII-secretion-target	unknown	unknown	gnl\|CDD\|227179
NZ_CP012506.2\|WP_003401463.1\|340488_342384_+\|type-VII-secretion-system-ESX-3-AAA-family-ATPase-EccA3	unknown	unknown	gnl\|CDD\|188437
NZ_CP012506.2\|WP_003401485.1\|347982_348291_+\|type-VII-secretion-system-ESX-3-target-PE5	unknown	unknown	gnl\|CDD\|376422
NZ_CP012506.2\|WP_003401472.1\|342380_343997_+\|type-VII-secretion-system-ESX-3-subunit-EccB3	unknown	unknown	gnl\|CDD\|368288
NZ_CP012506.2\|WP_003401521.1\|350507_351395_+\|type-VII-secretion-system-ESX-3-associated-protein-EspG3	unknown	unknown	gnl\|CDD\|379414

Protein	Function_ID	Function_description	E-value
NZ_CP012506.2\|WP_003401397.1\|327971_328592_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	6.87158e-12
NZ_CP012506.2\|WP_003401404.1\|330014_330935_+\|DUF2236-domain-containing-protein	gnl\|CDD\|226188	COG3662, COG3662, Uncharacterized protein conserved in bacteria [Function unknown].	2.89836e-118
NZ_CP012506.2\|WP_003401478.1\|343993_347986_+\|type-VII-secretion-system-ESX-3-FtsK/SpoIIIE-family-ATPase-EccC3	gnl\|CDD\|274858	TIGR03924, T7SS_EccC_a, type VII secretion protein EccCa. This model represents the N-terminal domain or EccCa subunit of the type VII secretion protein EccC as found in the Actinobacteria. Type VII secretion is defined more broadly as including secretion systems for ESAT-6-like proteins in the Firmicutes as well as in the Actinobacteria, but this family does not show close homologs in the Firmicutes. [Protein fate, Protein and peptide secretion and trafficking].	0
NZ_CP012506.2\|WP_025202582.1\|331703_334511_-\|PE-family-protein	gnl\|CDD\|376422	pfam00934, PE, PE family. This family named after a PE motif near to the amino terminus of the domain. The PE family of proteins all contain an amino-terminal region of about 110 amino acids. The carboxyl terminus of this family are variable and fall into several classes. The largest class of PE proteins is the highly repetitive PGRS class which have a high glycine content. The function of these proteins is uncertain but it has been suggested that they may be related to antigenic variation of Mycobacterium tuberculosis.	2.38224e-31
NZ_CP012506.2\|WP_003902643.1\|337722_339333_+\|PPE-family-protein	gnl\|CDD\|227938	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion].	1.75244e-73
NZ_CP012506.2\|WP_025096313.1\|326799_327975_-\|alpha/beta-hydrolase	gnl\|CDD\|378820	pfam12146, Hydrolase_4, Serine aminopeptidase, S33. This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. It is found in association with pfam00561. The majority of the members in this family carry the exopeptidase active-site residues of Ser-122, Asp-239 and His-269 as in UniProtKB:Q7ZWC2.	0.0018025
NZ_CP012506.2\|WP_003401392.1\|324533_326729_-\|acyl-CoA-dehydrogenase	gnl\|CDD\|173841	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26. Putative acyl-CoA dehydrogenases (ACAD). Mitochondrial acyl-CoA dehydrogenases (ACAD) catalyze the alpha, beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of ACAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. The ACD family includes the eukaryotic beta-oxidation, as well as amino acid catabolism enzymes. These enzymes share high sequence similarity, but differ in their substrate specificities. The mitochondrial ACD's are generally homotetramers and have an active site glutamate at a conserved position.	1.76306e-158
NZ_CP012506.2\|WP_003401448.1\|339356_340265_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|225852	COG3315, COG3315, O-Methyltransferase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism].	1.10201e-94
NZ_CP012506.2\|WP_003899886.1\|329199_329925_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	7.66172e-07
NZ_CP012506.2\|WP_003401488.1\|348293_349835_+\|type-VII-secretion-system-ESX-3-target-PPE4	gnl\|CDD\|227938	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion].	1.09345e-59
NZ_CP012506.2\|WP_003401399.1\|328688_329270_+\|VOC-family-protein	gnl\|CDD\|366361	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily.	5.1808e-20
NZ_CP012506.2\|WP_003401406.1\|330974_331403_-\|type-II-toxin-antitoxin-system-VapC-family-toxin	gnl\|CDD\|350245	cd18678, PIN_MtVapC25_VapC33-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC25, VapC33, and related proteins. This subfamily includes the Virulence associated protein C (VapC)-like PIN (PilT N terminus) domain of Mycobacterium tuberculosis VapC25, VapC29, VapC33, VapC37, and VapC39 toxins. It belongs to the VapC-like family of the PIN domain nuclease superfamily. VapC is a PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include FitB toxin of the FitAB TA system, eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The structural properties of the PIN domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions; in some members, additional metal coordinating residues can be found while some others lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	2.23805e-60
NZ_CP012506.2\|WP_003899884.1\|322834_324517_+\|acyl-CoA-synthetase	gnl\|CDD\|236097	PRK07788, PRK07788, acyl-CoA synthetase; Validated.	0
NZ_CP012506.2\|WP_003401503.1\|349883_350177_+\|type-VII-secretion-system-protein-EsxG	gnl\|CDD\|274862	TIGR03930, WXG100_ESAT6, WXG100 family type VII secretion target. Members of this protein family include secretion targets for the two main variants of type VII secretion systems (T7SS), one found in the Actinobacteria, one found in the Firmicutes. This model was derived through iteration from pfam06013. The best characterized member of this family is ESAT-6 from Mycobacterium tuberculosis. Members of this family usually are ~100 amino acids in length but occasionally have a long C-terminal extension.	0.00514324
NZ_CP012506.2\|WP_003401514.1\|350206_350497_+\|WXG100-family-type-VII-secretion-target	gnl\|CDD\|227179	COG4842, COG4842, Uncharacterized protein conserved in bacteria [Function unknown].	2.85211e-21
NZ_CP012506.2\|WP_003401463.1\|340488_342384_+\|type-VII-secretion-system-ESX-3-AAA-family-ATPase-EccA3	gnl\|CDD\|188437	TIGR03922, T7SS_EccA, type VII secretion AAA-ATPase EccA. This model represents the AAA family ATPase, EccA, of the actinobacterial flavor of type VII secretion systems. Species such as Mycobacterium tuberculosis have several instances of this system per genome, designated EccA1, EccA2, etc. [Protein fate, Protein and peptide secretion and trafficking].	0
NZ_CP012506.2\|WP_003401485.1\|347982_348291_+\|type-VII-secretion-system-ESX-3-target-PE5	gnl\|CDD\|376422	pfam00934, PE, PE family. This family named after a PE motif near to the amino terminus of the domain. The PE family of proteins all contain an amino-terminal region of about 110 amino acids. The carboxyl terminus of this family are variable and fall into several classes. The largest class of PE proteins is the highly repetitive PGRS class which have a high glycine content. The function of these proteins is uncertain but it has been suggested that they may be related to antigenic variation of Mycobacterium tuberculosis.	7.41358e-11
NZ_CP012506.2\|WP_003401472.1\|342380_343997_+\|type-VII-secretion-system-ESX-3-subunit-EccB3	gnl\|CDD\|368288	pfam05108, T7SS_ESX1_EccB, Type VII secretion system ESX-1, transport TM domain B. EccB is a family of largely Gram-positive bacterial transmembrane componenets of the type VII secretion system characterized in Mycobacterium tuberculosis, systems ESX1-5. Translocation of virulent peptides through the membranes is thought to be mediated via a complex that includes EccB, EccC, EccD, EccE, and MycP. EccB, EccC, EccD, and EccE form a stable complex in the mycobacterial cell envelope.	0
NZ_CP012506.2\|WP_003401521.1\|350507_351395_+\|type-VII-secretion-system-ESX-3-associated-protein-EspG3	gnl\|CDD\|379414	pfam14011, ESX-1_EspG, EspG family. This family of proteins contains the the EspG1, EspG2 and EspG3 proteins from M. tuberculosis. These proteins are involved in the ESAT-6 secretion system 1 (ESX-1) of Mycobacterium tuberculosis which is important for virulence and intercellular spread. Proteins in this family are typically between 254 and 295 amino acids in length.	1.29098e-54

>NZ_CP012506.2|WP_025202582.1|331703_334511_-|PE-family-protein
MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQAYQALSAQAQAFHAQFTQALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGANGAPGTGADGAPGGWLIGNGGAGGSGAANNAVGGTGGTGGAGGASGLLGSGGAGGAGGVATNTGGIGGAGGTGGNAVLFGAGGASTNTTGGAGGAGGDGGNAGLLFGAAGVGGAGGFALATTASGGAGGAGGAGGMFTDGGVGGVGGKGGFGGAGGAGGNGGLFGAGGTGGAGGTIGAGVAGMGGAGGAGGAGGLFGAGGTGGSGGGGATTGGDGGAGGNAGTLSLGAAGGAGGAGGEGLASAGGDGGAGGDGGNAGMFFGSGGAGGAGGFGRTTGGIGGTGGNAGLLNGSGGAGGAGGAAITGPGGTGGAGGIPGLIGNGGNGGDGGASVTGTGGNGGAGGNGVQIGNGGNGGSGGTGAAAGKAGLGGLGGQLIGLDGSNAPVSTSVHTLQQAALNVVNEPFQTLTGRPLIGNGANGTPGTGAAGGAGGWLFGNGGNGGHGATNTAATATGGAGGAGGILFGTGGNGGTGGIATGAGGIGGAGGAGGVSLLIGSGGTGGNGGNSIGVAGIGGAGGRGGDAGLLFGAAGTGGHGAAGGVPAGVGGAGGNGGLFANGGAGGAGGFNAAGGNGGNGGLFGTGGTGGAGTNFGAGGNGGNGGLFGAGGTGGAAGSGGSGITTGGGGHGGNAGLLSLGASGGAGGSGGASSLAGGAGGTGGNGALLFGFGGAGGAGGHGGAALTSIQQGGAGGAGGNGGLLFGSAGAGGAGGSGANALGAGTGGTGGDGGHAGVFGNGGDGGCRRVWRRYRRQRWCRRQRRADRQRRQRRQRRQSRGHARCRRHRRAAARRERTQRLAIAGRPATTRGVEGISCSPQMMP
>NZ_CP012506.2|WP_011961607.1|331426_331609_-|hypothetical-protein
MGAVIEDALRRELAAARTGGARPTVPVFDAGTGPRPGIDLTSNTVLSEVLDEGLELNSRK
>NZ_CP012506.2|WP_003401406.1|330974_331403_-|type-II-toxin-antitoxin-system-VapC-family-toxin
MFLIDVNVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLTTNRRIFEIPSPRADAFAFVEAVNAQPHHLPTSPGPRHLVLLRKLCDEADASGDLIPDAVLGAIAVEHHCAVVSLDRDFARFASVRHIRPPI
>NZ_CP012506.2|WP_003401404.1|330014_330935_+|DUF2236-domain-containing-protein
MAISLVAHQPIPHVERPMADPPRLQLARRRRSAAGPGGNEDSLMGVALLAGPANVIMELAMPGVGYGVLESRVESGRLDRHPIKRARTTFTYVAVAVAGSDDQKAAFRRAVNKVHAQVYSTPESPVSYHAFDPELQLWVAACLYKGGVDVYRTFVGEMDDEEADHHYRAGMAMGTTLQVPPQMWPPDRAAFDRYWRQSLDRVHIDDVVRDYLYPIVALRIRGIALPGPLRRLSEGIALLITTGFLPQRFRDEMRLPWDATKQRRFDALMAVLRTVNRLMPRFVREFPFNLMLWDLDRRMRRGRPLV
>NZ_CP012506.2|WP_003899886.1|329199_329925_-|TetR/AcrR-family-transcriptional-regulator
MTRSDRPYRGVEAAERLATRRRQSLSAGLDLLGSDQHDIAELTIRTICRRAGLSVRYFYESFTDKDEFVGRVFDWVVAELVATTQAAVTAVPAREQTRAGMANIVRTITADARVGRLLFSTQLANAVITRKRAESSALFAMLSGQHAVDTLHAPANDHVKAVAHFAVGGVGQTISAWLAGDVRLDPDQLVDQLAALLDELTDPNLSRPRVAATAAKSGANDPQPPEVAGQPPSSARPARRS
>NZ_CP012506.2|WP_003401399.1|328688_329270_+|VOC-family-protein
MIKPHNTNTEFELGGINHVALVCSDMARTVDFYSNILGMPLIKALDLPGGQGQHFFFDAGNGDCVAFFWFADAPDRVPGLSSPVAIPGIGDITSAVSTMNHLAFHVPAERFDAYRQRLKDKGVRVGPVLNHDDSETQVSAVVHPGVYVRSFYFQDPDGITLEFACWTKEFTTSDAQAVPKTAADRRPPVAADR
>NZ_CP012506.2|WP_003401397.1|327971_328592_-|TetR/AcrR-family-transcriptional-regulator
MPDFPTQRGRRTQAAIDAAARTVVVRNGILATTVADITAEAGRSAASFYNYYDSKEAMVRQWALRFRDDANQRALSVIRHGLSDRERAYEAAAAHWYTYRNRLAEAISVSQLAMVSDDFAQYWSEICQIPISFITETVKRAQAHGYCVGDDPQLMAEAIVAMFNQFCYLQLSGKRSRRGQPDDQACIQTLANIYYRAIYSKEDSSN
>NZ_CP012506.2|WP_025096313.1|326799_327975_-|alpha/beta-hydrolase
MTGRAATPGVIREFVGLPSRTAGRAAAGGHPCQGLYHHSVGRKPKVALIAAHYQIDFSEHYLAEYMAIRGIGFLGWNTRFRGFESSFLLDHALVDIGVGVRWLREVQGVETVVLLGNSGGGSLMAAYQSQAVDPNVTPLDGMRPAAGVTELPAADAYVAAAAHPGRPDVLTAWMDAAVIDENDPVATDPELDLFDERNGPPYSPEFISRYRSAQVKRNHTITDWAESELKRVRAAGFSDRPFSVMRTWADPRMVDPSIEPTKRRPNQCYAGTPVKANRSAHGIAAACTLRGWLGMWSLRVAQTRAAPHLARITCPALVLNAEADTGIFPSDAQQIYDGLASSDKTQVSIDTDHYFTTPGARSEQADTIAKWIASGGAECSHPFRRPSASQR
>NZ_CP012506.2|WP_003401392.1|324533_326729_-|acyl-CoA-dehydrogenase
MSIAITPEHYELADSVRSLVARVAPSEVLHAALESPVENPPPYWQAAAEQGLQGVHLAESVGGQGFGILELAVVLAEFGYGAVPGPFVPSAIASALIAAHDPQAKVLAELATGAAIAAYALDSGLTATRHGDVLVIRGEVRAVPAAAQASVLVLPVAIESRDEWVVLRNDQLEIEAVKSLDPLRPIAHVRANAVDVSDDALLSNLTMTTAHALMSTLLSAEAVGVARWATDTASAYAKIREQFGRPIGQFQAIKHKCAEMIADTERATAAVWDAARALDDAGESSSDVEFAAAVAATLAPATAQRCTQDCIQVHGGIGFTWEHDTNVYYRRALMLAACFGRGSEYPQRVVDTATTAGMRPVDIDLDPSTEKLRAQIRAEVAALKAMPREPRTVAIAEGGWVLPYLPKPWGRAASPVEQIIIAQEFTAGRVKRPQIAIATWIVPSIVAFGTDNQKQRLLPPTFRGDIFWCQLFSEPGAGSDLASLATKATRVDGGWRITGQKIWTTGAQYSQWGALLARTDPSAPKHNGITYFLLDMKSEGVQVKPLRELTGKEFFNTVYLDDVFVPDELVLGEVNRGWEVSRNTLTAERVSIGGSDSTFLPTLGEFVDFVRDYRFEGQFDQVARHRAGQLIAEGHATKLLNLRSTLLTLAGGDPMAPAAISKLLSMRTGQGYAEFAVSSFGTDAVIGDTERLPGKWGEYLLASRATTIYGGTSEVQLNIIAERLLGLPRDP
>NZ_CP012506.2|WP_003899884.1|322834_324517_+|acyl-CoA-synthetase
MPNLTDLPGQAVSKLQKSIGQYVARGTAELHYLRKIIESGAIGLEPPLNYAALAADIRKWGEVGMLPSHNARRAPNRAAVIDEEGTLTFSELDEAAHAVANGLLAKGVRAGDGVAILARNHRWFVIANYGAARVGARIILLNSEFSGPQIKEVSDREGAKVIIYDDEYTKAVSLAQPPLGKLRALGVNPDDDKPSGSSDETLAELIAHSSTAPAPKASRRASIIILTSGTTGTPKGANRNTPPTLAPIGGILSHVPFKAGEVTLLPSPMFHALGYMHAALAMFLGSTLVLRRRFKPALVLEDIEKHKATSMVVVPVMLSRILDQLEKTEPKPDLSSLKIVFVSGSQLGAELATRALGDLGPVIYNMYGSTEVAFATIAGPKDLQFNPSTVGPVVKGVTVKILDENGNEVPQGAVGRIFVGNAFPFEGYTGGGGKQIIDGLLSSGDVGYFDERGLLYVSGRDDEMIVSGGENVFPAEVEDLISGHPDVVEAAAIGVDDKEFGARLRAFVVKKPGADLDEDTIKQYVRDHLARYKVPREVIFLDELPRNPTGKVLKRELRKL
>NZ_CP012506.2|WP_003902643.1|337722_339333_+|PPE-family-protein
MTLWMASPPEVHSALLSSGPGPGSVLSAAGVWSSLSAEYAAVADELIGLLGAVQTGAWQGPSAAAYVAAHAPYLAWLMRASETSAEAAARHETVAAAYTTAVAAMPTLVELAANHTLHGVLVATNFFGINTIPIALNEADYARMWTQAASTMATYQAVAEAAVASAPQTTPAPPILAAEAADDDHDHDHDHGGEPTPLDYLVAEILRIISGGRLIWDPAEGTMNGIPFEDYTDAAQPIWWVVRAIEFSKDFETFVQKLFVNPVEAFQFYFELLLFDYPTHIVQIVEALSQSPQLLAVALGSVISNLGAVTGFAGLSGLAGMQPAAIPALAPVAAAPPTLPAVAMAPTMAAPGAAVASAAAPASAPAASTVASATPAPPPAPGAAGFGYPYAIAPPGIGFGSGMSASASAQRKAPQPDSAAAAAAAAAVRDQARARRRRRVTRRGYGDEFMDMNIDVDPDWGPPPGEDPVTSTVASDRGAGHLGFAGTARREAVADAAGMTTLAGDDFGDGPTTPMVPGSWDPDRDAPGSAEPGDRG
>NZ_CP012506.2|WP_003401448.1|339356_340265_+|class-I-SAM-dependent-methyltransferase
MRTEGDSWDITTSVGSTALFVATARALEAQKSDPLVVDPYAEAFCRAVGGSWADVLDGKLPDHKLKSTDFGEHFVNFQGARTKYFDEYFRRAAAAGARQVVILAAGLDSRAYRLPWPDGTTVFELDRPQVLDFKREVLASHGAQPRALRREIAVDLRDDWPQALRDSGFDAAAPSAWIAEGLLIYLPATAQERLFTGIDALAGRRSHVAVEDGAPMGPDEYAAKVEEERAAIAEGAEEHPFFQLVYNERCAPAAEWFGERGWTAVATLLNDYLEAVGRPVPGPESEAGPMFARNTLVSAARV
>NZ_CP012506.2|WP_003401463.1|340488_342384_+|type-VII-secretion-system-ESX-3-AAA-family-ATPase-EccA3
MAGVGAGDSGGVERDDIGMVAASPVASRVNGKVDADVVGRFATCCRALGIAVYQRKRPPDLAAARSGFAALTRVAHDQCDAWTGLAAAGDQSIGVLEAASRTATTAGVLQRQVELADNALGFLYDTGLYLRFRATGPDDFHLAYAAALASTGGPEEFAKANHVVSGITERRAGWRAARWLAVVINYRAERWSDVVKLLTPMVNDPDLDEAFSHAAKITLGTALARLGMFAPALSYLEEPDGPVAVAAVDGALAKALVLRAHVDEESASEVLQDLYAAHPENEQVEQALSDTSFGIVTTTAGRIEARTDPWDPATEPGAEDFVDPAAHERKAALLHEAELQLAEFIGLDEVKRQVSRLKSSVAMELVRKQRGLTVAQRTHHLVFAGPPGTGKTTIARVVAKIYCGLGLLKRENIREVHRADLIGQHIGETEAKTNAIIDSALDGVLFLDEAYALVATGAKNDFGLVAIDTLLARMENDRDRLVVIIAGYRADLDKFLDTNEGLRSRFTRNIDFPSYTSHELVEIAHKMAEQRDSVFEQSALHDLEALFAKLAAESTPDTNGISRRSLDIAGNGRFVRNIVERSEEEREFRLDHSEHAGSGEFSDEELMTITADDVGRSVEPLLRGLGLSVRA
>NZ_CP012506.2|WP_003401472.1|342380_343997_+|type-VII-secretion-system-ESX-3-subunit-EccB3
MTNQQHDHDFDHDRRSFASRTPVNNNPDKVVYRRGFVTRHQVTGWRFVMRRIAAGIALHDTRMLVDPLRTQSRAVLMGVLIVITGLIGSFVFSLIRPNGQAGSNAVLADRSTAALYVRVGEQLHPVLNLTSARLIVGRPVSPTTVKSTELDQFPRGNLIGIPGAPERMVQNTSTDANWTVCDGLNAPSRGGADGVGVTVIAGPLEDTGARAAALGPGQAVLVDSGAGTWLLWDGKRSPIDLADHAVTSGLGLGADVPAPRIIASGLFNAIPEAPPLTAPIIPDAGNPASFGVPAPIGAVVSSYALKDSGKTISDTVQYYAVLPDGLQQISPVLAAILRNNNSYGLQQPPRLGADEVAKLPVSRVLDTRRYPSEPVSLVDVTRDPVTCAYWSKPVGAATSSLTLLAGSALPVPDAVHTVELVGAGNGGVATRVALAAGTGYFTQTVGGGPDAPGAGSLFWVSDTGVRYGIDNEPQGVAGGGKAVEALGLNPPPVPIPWSVLSLFVPGPTLSRADALLAHDTLVPDSRPARPVSAEGGYR
>NZ_CP012506.2|WP_003401478.1|343993_347986_+|type-VII-secretion-system-ESX-3-FtsK/SpoIIIE-family-ATPase-EccC3
MSRLIFEARRRLAPPSSHQGTIIIEAPPELPRVIPPSLLRRALPYLIGILIVGMIVALVATGMRVISPQTLFFPFVLLLAATALYRGNDKKMRTEEVDAERADYLRYLSVVRDNIRAQAAEQRASALWSHPDPTALASVPGSRRQWERDPHDPDFLVLRAGRHTVPLATTLRVNDTADEIDLEPVSHSALRSLLDTQRSIGDVPTGIDLTKVSRITVLGERAQVRAVLRAWIAQAVTWHDPTVLGVALAARDLEGRDWNWLKWLPHVDIPGRLDALGPARNLSTDPDELIALLGPVLADRPAFTGQPTDALRHLLIVVDDPDYDLGASPLAVGRAGVTVVHCSASAPHREQYSDPEKPILRVAHGAIERWQTGGWQPYIDAADQFSADEAAHLARRLSRWDSNPTHAGLRSAATRGASFTTLLGIEDASRLDVPALWAPRRRDEELRVPIGVTGTGEPLMFDLKDEAEGGMGPHGLMIGMTGSGKSQTLMSILLSLLTTHSAERLIVIYADFKGEAGADSFRDFPQVVAVISNMAEKKSLADRFADTLRGEVARREMLLREAGRKVQGSAFNSVLEYENAIAAGHSLPPIPTLFVVADEFTLMLADHPEYAELFDYVARKGRSFRIHILFASQTLDVGKIKDIDKNTAYRIGLKVASPSVSRQIIGVEDAYHIESGKEHKGVGFLVPAPGATPIRFRSTYVDGIYEPPQTAKAVVVQSVPEPKLFTAAAVEPDPGTVIADTDEQEPADPPRKLIATIGEQLARYGPRAPQLWLPPLDETIPLSAALARAGVGPRQWRWPLGEIDRPFEMRRDPLVFDARSSAGNMVIHGGPKSGKSTALQTFILSAASLHSPHEVSFYCLDYGGGQLRALQDLAHVGSVASALEPERIRRTFGELEQLLLSRQQREVFRDRGANGSTPDDGFGEVFLVIDNLYGFGRDNTDQFNTRNPLLARVTELVNVGLAYGIHVIITTPSWLEVPLAMRDGLGLRLELRLHDARDSNVRVVGALRRPADAVPHDQPGRGLTMAAEHFLFAAPELDAQTNPVAAINARYPGMAAPPVRLLPTNLAPHAVGELYRGPDQLVIGQREEDLAPVILDLAANPLLMVFGDARSGKTTLLRHIIRTVREHSTADRVAFTVLDRRLHLVDEPLFPDNEYTANIDRIIPAMLGLANLIEARRPPAGMSAAELSRWTFAGHTHYLIIDDVDQVPDSPAMTGPYIGQRPWTPLIGLLAQAGDLGLRVIVTGRATGSAHLLMTSPLLRRFNDLQATTLMLAGNPADSGKIRGERFARLPAGRAILLTDSDSPTYVQLINPLVDAAAVSGETQQKGSQS
>NZ_CP012506.2|WP_003401485.1|347982_348291_+|type-VII-secretion-system-ESX-3-target-PE5
MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVEHAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATYGVVGG
>NZ_CP012506.2|WP_003401488.1|348293_349835_+|type-VII-secretion-system-ESX-3-target-PPE4
MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAWQGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIHTVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNPGGGAASTVGAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQDPIGNSIKIIIAFLTNPIQALITYGPLLFALGYQIFFNLVGWPTWGMILSSPFLLPAGLGLGLAAIAFLPIVLAPAVIPPASTPLAAAAVAAGSVWPAVSMAVTGAGTAGAATPAAGAAPSAGAAPAPAAPATASFAYAVGGSGDWGPSLGPTVGGRGGIKAPAATVPAAAAAAATRGQSRARRRRRSELRDYGDEFLDMDSDSGFGPSTGDHGAQASERGAGTLGFAGTATKERRVRAVGLTALAGDEFGNGPRMPMVPGTWEQGSNEPEAPDGSGRGGGDGLPHDSK
>NZ_CP012506.2|WP_003401503.1|349883_350177_+|type-VII-secretion-system-protein-EsxG
MSLLDAHIPQLVASQSAFAAKAGLMRHTIGQAEQAAMSAQAFHQGESSAAFQAAHARFVAAAAKVNTLLDVAQANLGEAAGTYVAADAAAASTYTGF
>NZ_CP012506.2|WP_003401514.1|350206_350497_+|WXG100-family-type-VII-secretion-target
MSQIMYNYPAMLGHAGDMAGYAGTLQSLGAEIAVEQAALQSAWQGDTGITYQAWQAQWNQAMEDLVRAYHAMSSTHEANTMAMMARDTAEAAKWGG
>NZ_CP012506.2|WP_003401521.1|350507_351395_+|type-VII-secretion-system-ESX-3-associated-protein-EspG3
MDATPNAVELTVDNAWFIAETIGAGTFPWVLAITMPYSDAAQRGAFVDRQRDELTRMGLLSPQGVINPAVADWIKVVCFPDRWLDLRYVGPASADGACELLRGIVALRTGTGKTSNKTGNGVVALRNAQLVTFTAMDIDDPRALVPILGVGLAHRPPARFDEFSLPTRVGARADERLRSGVPLGEVVDYLGIPASARPVVESVFSGPRSYVEIVAGCNRDGRHTTTEVGLSIVDTSAGRVLVSPSRAFDGEWVSTFSPGTPFAIAVAIQTLTACLPDGQWFPGQRVSRDFSTQSS

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Crispr_ID: NZ_CP012506_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012506_4

364822-365520

Orphan

Consensus_repeat	Method
TTCGCGAAGCCGATGTTGTAGCTGCCGGTGTTG	CRISPRCasFinder

10 spacers

The CRISPR arrays of NZ_CP012506_4

>merge|NZ_CP012506|4|364822-365520|CRISPRCasFinder
ACCAAGAAGCCGTTGCTGTAGCTGCCGGTAATGAACGCACCGGTGTCCACATCGCCCGTGTTCGCCACGCCCGTGTTGTAGTCACCGGTGTTGAGGTAGCCCGTGTTGCCACTGCCCGGGTTGAAGCCGCCGGTGTTGAAGCTGCCCGGGTTGAAGCTGCCGGTGTTGAGGTCCCCGGGGTTGAACACGCCCGTGTTGGTGCTGCCCGCGTTGCCGATGCCGGTGTTGAAGCCGCCCGAGTTCGCGAGACCGAAGTTGCCGGTGCCGGTGTTAAAGATGCCGACGTTGCCGGTGCCCGAGTTGAAGAACCCGATGTTTCCGCTGCCGGAGTTGAACAGCCCGATGTTGTTGCTGCCCGAGTTGAGGCTGCCGATCCCGATCTGGCCGTTGCCGGTGAGCCCGACGCCGATGTTGTTGTTACCGGTATTCGCGAAGCCGATGTTGTAGCTGCCGGTGTTGGCAAAGCCCAGGTTGTCGCTGCCGAAGTTCGCGAAGCCGATGTTGTAGCTGCCGGCGTTGCCAAAGCCCAGGTTGTCGTCGCCCAGATTTGCCAACCCGATGTTGTAGCTGCCCAGGTTCGCCAAGCCGATATCGAAGATCCCGGTGTTGGCGATGCCGATGTTGTTACCGCCGATGTTGACCCCGCCGAAGTTGAGGTCGCCGAGGTTGCCGATGCCCAGGTTGGAGTCGCCGGTATTA

>NZ_CP012506|4|1|364822-365520|CRISPRCasFinder
ACCAAGAAGCCGTTGCTGTAGCTGCCGGTAATG	AACGCACCGGTGTCCACATCGCCCGTG
TTCGCCACGCCCGTGTTGTAGTCACCGGTGTTG	AGGTAGCCCGTGTTGCCACTGCCCGGG
TTGAAGCCGCCGGTGTTGAAGCTGCCCGGGTTG	AAGCTGCCGGTGTTGAGGTCCCCGGGGTTGAACACGCCCGTG
TTGGTGCTGCCCGCGTTGCCGATGCCGGTGTTG	AAGCCGCCCGAGTTCGCGAGACCGAAG
TTGCCGGTGCCGGTGTTAAAGATGCCGACGTTG	CCGGTGCCCGAGTTGAAGAACCCGATGTTTCCGCTGCCGGAG
TTGAACAGCCCGATGTTGTTGCTGCCCGAGTTG	AGGCTGCCGATCCCGATCTGGCCGTTGCCGGTG
AGCCCGACGCCGATGTTGTTGTTACCGGTATTC	GCGAAGCCGATGTTGTAGCTGCCGGTG
TTGGCAAAGCCCAGGTTGTCGCTGCCGAAGTTC	GCGAAGCCGATGTTGTAGCTGCCGGCGTTGCCAAAGCCCAGGTTGTCGTCGCCCAGA
TTTGCCAACCCGATGTTGTAGCTGCCCAGGTTC	GCCAAGCCGATATCGAAGATCCCGGTG
TTGGCGATGCCGATGTTGTTACCGCCGATGTTG	ACCCCGCCGAAGTTGAGGTCGCCGAGG
TTGCCGATGCCCAGGTTGGAGTCGCCGGTATTA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012506.2\|WP_003902650.1\|377514_378744_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012506.2\|WP_003401619.1\|381221_381884_-\|DUF3060-domain-containing-protein	unknown	unknown	gnl\|CDD\|371435
NZ_CP012506.2\|WP_003401566.1\|362402_362828_+\|PIN-domain-nuclease	unknown	unknown	gnl\|CDD\|350322
NZ_CP012506.2\|WP_003401594.1\|375455_376172_+\|phosphatase-PAP2-family-protein	unknown	unknown	gnl\|CDD\|239486
NZ_CP012506.2\|WP_003905279.1\|381944_382829_+\|family-16-glycosylhydrolase	unknown	unknown	gnl\|CDD\|225182
NZ_CP012506.2\|WP_003401560.1\|361834_362137_+\|toxin-antitoxin-system-toxin	unknown	unknown	unknown
NZ_CP012506.2\|WP_003401597.1\|376273_376930_+\|L,D-transpeptidase	unknown	unknown	gnl\|CDD\|226309
NZ_CP012506.2\|WP_003401563.1\|362184_362406_+\|type-II-toxin-antitoxin-system-antitoxin-VapB2	unknown	unknown	gnl\|CDD\|222832
NZ_CP012506.2\|WP_003905275.1\|362963_363596_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP012506.2\|WP_003900117.1\|363592_364501_+\|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|187670
NZ_CP012506.2\|WP_003401555.1\|361610_361838_+\|ribbon-helix-helix-protein,-CopG-family	unknown	unknown	gnl\|CDD\|279710
NZ_CP012506.2\|WP_003401540.1\|357303_358107_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226848
NZ_CP012506.2\|WP_003401544.1\|358116_359514_-\|sulfatase	unknown	unknown	gnl\|CDD\|293751
NZ_CP012506.2\|WP_003900119.1\|378898_380761_+\|Hsp70-family-protein	unknown	unknown	gnl\|CDD\|223520
NZ_CP012506.2\|WP_003401538.1\|356529_357315_+\|trans-aconitate-2-methyltransferase	unknown	unknown	gnl\|CDD\|184509
NZ_CP012506.2\|WP_010886074.1\|359692_361468_+\|PE-family-protein	unknown	unknown	gnl\|CDD\|376422
NZ_CP012506.2\|WP_003401589.1\|374915_375398_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012506.2\|WP_003401613.1\|380832_381219_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223403
NZ_CP012506.2\|WP_003401584.1\|374256_374928_+\|5,6-dimethylbenzimidazole-synthase	unknown	unknown	gnl\|CDD\|162875
NZ_CP012506.2\|WP_003401601.1\|376999_377491_-\|nuclear-transport-factor-2-family-protein	unknown	unknown	gnl\|CDD\|379275

Protein	Function_ID	Function_description	E-value
NZ_CP012506.2\|WP_003401566.1\|362402_362828_+\|PIN-domain-nuclease	gnl\|CDD\|350322	cd18755, PIN_MtVapC3_VapC21-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC3, VapC21 and related proteins. This subfamily includes the Virulence associated protein C (VapC)-like PIN (PilT N terminus) domain of Mycobacterium tuberculosis VapC3 and VapC21 toxins. It belongs to the VapC-like family of the PIN domain nuclease superfamily. VapC is a PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include FitB toxin of the FitAB TA system, eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The structural properties of the PIN domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions; in some members, additional metal coordinating residues can be found while some others lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	2.62509e-57
NZ_CP012506.2\|WP_003401594.1\|375455_376172_+\|phosphatase-PAP2-family-protein	gnl\|CDD\|239486	cd03392, PAP2_like_2, PAP2_like_2 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.	2.34145e-31
NZ_CP012506.2\|WP_003905279.1\|381944_382829_+\|family-16-glycosylhydrolase	gnl\|CDD\|225182	COG2273, SKN1, Beta-glucanase/Beta-glucan synthetase [Carbohydrate transport and metabolism].	3.10128e-51
NZ_CP012506.2\|WP_003401544.1\|358116_359514_-\|sulfatase	gnl\|CDD\|293751	cd16027, SGSH, N-sulfoglucosamine sulfohydrolase (SGSH; sulfamidase). N-sulfoglucosamine sulfohydrolase (SGSH) belongs to the sulfatase family and catalyses the cleavage of N-linked sulfate groups from the GAGs heparin sulfate and heparin. The active site is characterized by the amino-acid sequence motif C(X)PSR that is highly conserved among most sulfatases. The cysteine residue is post-translationally converted to a formylglycine (FGly) residue, which is crucial for the catalytic process. Loss of function of SGSH results a disease called mucopolysaccharidosis type IIIA (Sanfilippo A syndrome), a fatal childhood-onset neurodegenerative disease with mild facial, visceral and skeletal abnormalities.	5.75322e-137
NZ_CP012506.2\|WP_003401597.1\|376273_376930_+\|L,D-transpeptidase	gnl\|CDD\|226309	COG3786, COG3786, Uncharacterized protein conserved in bacteria [Function unknown].	4.28441e-100
NZ_CP012506.2\|WP_003401601.1\|376999_377491_-\|nuclear-transport-factor-2-family-protein	gnl\|CDD\|379275	pfam13577, SnoaL_4, SnoaL-like domain. This family contains a large number of proteins that share the SnoaL fold.	1.69655e-31
NZ_CP012506.2\|WP_003905275.1\|362963_363596_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	1.1641e-15
NZ_CP012506.2\|WP_003900117.1\|363592_364501_+\|SDR-family-NAD(P)-dependent-oxidoreductase	gnl\|CDD\|187670	cd09810, LPOR_like_SDR_c_like, light-dependent protochlorophyllide reductase (LPOR)-like, classical (c)-like SDRs. Classical SDR-like subgroup containing LPOR and related proteins. Protochlorophyllide (Pchlide) reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	2.69352e-146
NZ_CP012506.2\|WP_003401563.1\|362184_362406_+\|type-II-toxin-antitoxin-system-antitoxin-VapB2	gnl\|CDD\|222832	PHA01748, PHA01748, hypothetical protein.	0.00852727
NZ_CP012506.2\|WP_003401619.1\|381221_381884_-\|DUF3060-domain-containing-protein	gnl\|CDD\|371435	pfam11259, DUF3060, Protein of unknown function (DUF3060). Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed.	1.8339e-21
NZ_CP012506.2\|WP_003401540.1\|357303_358107_-\|hypothetical-protein	gnl\|CDD\|226848	COG4424, COG4424, Uncharacterized protein conserved in bacteria [Function unknown].	2.12891e-123
NZ_CP012506.2\|WP_003900119.1\|378898_380761_+\|Hsp70-family-protein	gnl\|CDD\|223520	COG0443, DnaK, Molecular chaperone [Posttranslational modification, protein turnover, chaperones].	3.71262e-67
NZ_CP012506.2\|WP_003401538.1\|356529_357315_+\|trans-aconitate-2-methyltransferase	gnl\|CDD\|184509	PRK14103, PRK14103, trans-aconitate 2-methyltransferase; Provisional.	8.03642e-167
NZ_CP012506.2\|WP_010886074.1\|359692_361468_+\|PE-family-protein	gnl\|CDD\|376422	pfam00934, PE, PE family. This family named after a PE motif near to the amino terminus of the domain. The PE family of proteins all contain an amino-terminal region of about 110 amino acids. The carboxyl terminus of this family are variable and fall into several classes. The largest class of PE proteins is the highly repetitive PGRS class which have a high glycine content. The function of these proteins is uncertain but it has been suggested that they may be related to antigenic variation of Mycobacterium tuberculosis.	2.70979e-29
NZ_CP012506.2\|WP_003401555.1\|361610_361838_+\|ribbon-helix-helix-protein,-CopG-family	gnl\|CDD\|279710	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family. The structure of this protein repressor, which is the shortest reported to date and the first isolated from a plasmid, has a homodimeric ribbon-helix-helix arrangement. The helix-turn-helix-like structure is involved in dimerization and not DNA binding as might have been expected.	0.000113886
NZ_CP012506.2\|WP_003401613.1\|380832_381219_+\|hypothetical-protein	gnl\|CDD\|223403	COG0326, HtpG, Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones].	0.00700797
NZ_CP012506.2\|WP_003401584.1\|374256_374928_+\|5,6-dimethylbenzimidazole-synthase	gnl\|CDD\|162875	TIGR02476, BluB, 5,6-dimethylbenzimidazole synthase. A previously published hypothesis that BluB, involved in cobalamin biosynthesis, is EC 1.16.8.1 (cob(II)yrinic acid a,c-diamide reductase) is now contradicted by newer work ascribing a role in 5,6-dimethylbenzimidazole (DMB) biosynthesis. The BluB protein is related to the nitroreductase family (pfam0881). [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin].	6.73571e-73

>NZ_CP012506.2|WP_003900117.1|363592_364501_+|SDR-family-NAD(P)-dependent-oxidoreductase
MNTGTAVITGASSGLGLQCARALLRRDASWHVVLAVRDPARGRAAMEELGEPNRCSVLEVDLASVRSVRSFVETVRTTPLPPIRALVCNAGLQVVSGIAFTDDGVEMTFGVNHLGHFALVTGILDWLARPARIVVVSSGTHDPSKHTGMPDPRYTCAADLAHPPTDQNTPAEGRRRYTTSKLCNVLFTYELDRRLDHGEQGVMVNAFDPGLMPGSGLARDYPPILRLAYRLLSPMLRVLPFVHSTRVSGEHLAALAVDPRFAGVTGQYFAGAKAIRSSAESYDRAKALDLWETSERLLAQVT
>NZ_CP012506.2|WP_003905275.1|362963_363596_+|TetR/AcrR-family-transcriptional-regulator
MGVPAKKKQQQGERSRESILDATERLMATKGYAATSISDIRDACGLAPSSIYWHFGSKEGVLAAMMERGAQRFFAAIPTWDEADGPVEQRSERQLTELVSLQSQHPDFLRLFYLLSMERSQDPAVAAVVRRVRNTAIARFRDSITHLLPSDIPPGKADLVVAELTAFAVALSDGVYFAGHLEPDTTDVERMYRRLRQALEALIPVLLEET
>NZ_CP012506.2|WP_003401566.1|362402_362828_+|PIN-domain-nuclease
MTDQRWLIDKSALVRLTDSPDMEIWSNRIERGLVHITGVTRLEVGFSAECGEIARREFREPPLSAMPVEYLTPRIEDRALEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVDKDFDAIAALTGQKTERLTHRPPSA
>NZ_CP012506.2|WP_003401563.1|362184_362406_+|type-II-toxin-antitoxin-system-antitoxin-VapB2
MSDVLIRDIPDDVLASLDAIAARLGLSRTEYIRRRLAQDAQTARVTVTAADLRRLRGAVAGLGDPELMRQAWR
>NZ_CP012506.2|WP_003401560.1|361834_362137_+|toxin-antitoxin-system-toxin
MIAPGDIAPRRDSEHELYVAVLSNALHRAADTGRVITCPFIPGRVPEDLLAMVVAVEQPNGTLLPELVQWLHVAALGAPLGNAGVAALREAASVVTALLC
>NZ_CP012506.2|WP_003401555.1|361610_361838_+|ribbon-helix-helix-protein,-CopG-family
MTKEKISVTVDAAVLAAIDADARAAGLNRSEMIEQALRNEHLRVALRDYTAKTVPALDIDAYAQRVYQANRAAGS
>NZ_CP012506.2|WP_010886074.1|359692_361468_+|PE-family-protein
MSFVIAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQAYQAASAQAAAFHAQVVRTLTVDAGAYASAEAANAGPNMLAAVNAPAQALLGRPLIGNGANGAPGTGQAGGDGGLLFGNGGNGGSGAPGQAGGAGGAAGFFGNGGNGGDGGAGANGGAGGTAGWFFGFGGNGGAGGIGVAGINGGLGGAGGDGGNAGFFGNGGNGGMGGAGAAGVNAVNPGLATPVTPAANGGNGLNLVGVPGTAGGGADGANGSAIGQAGGAGGDGGNASTSGGIGIAQTGGAGGAGGAGGDGAPGGNGGNGGSVEHTGATGSSASGGNGATGGNGGVGAPGGAGGNGGHVSGGSVNTAGAGGKGGNGGTGGAGGPGGHGGSVLSGPVGDSGNGGAGGDGGAGVSATDIAGTGGRGGNGGHGGLWIGNGGDGGAGGVGGVGGAGAAGAIGGHGGDGGSVNTPIGGSEAGDGGKGGLGGDGGGRGIFGQFGAGGAGGAGGVGGAGGAGGTGGGGGNGGAIFNAGTPGAAGTGGDGGVGGTGAAGGKGGAGGSGGVNGATGADGAKGLDGATGGKGNNGNPG
>NZ_CP012506.2|WP_003401544.1|358116_359514_-|sulfatase
MTSERATGQRENLLIVHWHDLGRYLGVYHHPDVYSPRLDRLAAEGILFTRAHATAPLCTPSRGSLFTGRYPQSNGLVGLAHHGWEYRTGVQTLPQLLSESGWYSALFGMQHETSYPKRLGFDEFDVSNSYCEYVVAKAQDWLHNRVPALDGQRFLLTAGFFETHRPYPHERYRPADSAAVELPDYLPDTPEVRQDVAEFYGSIATADEAVGRLLDTLADTGLDASTWVVFVTDHGPAFPRAKSTLYDAGTGIALIIRPPTRRAMAPRVYDELFSGVDLVPTLLDLLRLEVPADVEGVSHAPALLAPDTENAAVRDHVYTAKTYHDSFDPIRAIRTKEYSYIENYAPRPLLDLPWDIQESPAGMAVAPLVKAPRPQRELYDLRADPTETNNLLAGDDSTQGVAAIAADLAVRLHDWRQRTADVIPSDFAGSRIAERYTETYLRIHRKTPTGRSAIAADRGIDEHCS
>NZ_CP012506.2|WP_003401540.1|357303_358107_-|hypothetical-protein
MSRAVRPYLVLATQRSGSTLLVESLRATGCAGEPQEFFQYLPSTGMAPQPREWFAGVDDDTILQLLDPLDPGTPDTATPVAWREHVRTSGRTPNGVWGGKLMWNQTALLQQRAAQLPDRSGDGLRAAIRDVIGNEPVFVHVHRPDVVSQAVSFWRAVQTQVWRGHPDPKRDSQAVYHAGAIAHIIRNLRDQENGWRAWFAEEGIDPIDIAYPVLWRNLTAIVASVLDAIGQDPKLAPAPMLERQANQRSDEWVDRYRAEAPRLGLPT
>NZ_CP012506.2|WP_003401538.1|356529_357315_+|trans-aconitate-2-methyltransferase
MWDPDVYLAFSGHRNRPFYELVSRVGLERARRVVDLGCGPGHLTRYLARRWPGAVIEALDSSPEMVAAAAERGIDATTGDLRDWKPKPDTDVVVSNAALHWVPEHSDLLVRWVDELAPGSWIAVQIPGNFETPSHAAVRALARREPYAKLMRDIPFRVGAVVQSPAYYAELLMDTGCKVDVWETTYLHQLTGEHPVLDWITGSALVPVRERLSDESWQQFRQELIPLLNDAYPPRADGSTIFPFRRLFMVAEVGGARRSGG
>NZ_CP012506.2|WP_003401584.1|374256_374928_+|5,6-dimethylbenzimidazole-synthase
MFSAPERRAVYRVIAERRDMRRFVPGGVVSEDVLARLLHAAHAAPSVGLMQPWRFIRITDETLKRRIHALVDDERLLTAEALGAREEEFLALKVEGILDCAELLVVALCDRRGSYIFGRRTLPQMDLASVSCAIQNLWLAARSEGLGMGWVSLFDPQRLAALLAMPADAEPVAILCLGPVPEFPDRPALELDGWAYARPLAEFVSENRWSYPSALATDHHHGE
>NZ_CP012506.2|WP_003401589.1|374915_375398_-|hypothetical-protein
MAVIVRKWFGLGRLPADLRCQVEAEGLIYLAEYVAVTRRFTGVIPGLRASHSIASYVGALAFTEQRVLGTLSMVPKLAGRVVDARWDGPQAGAATAEISPTGLQLDLDVADVDPKFSGQLALHFKATIGEDVLSRLPRRSLAFDVPAEYVNLAVGVTYSP
>NZ_CP012506.2|WP_003401594.1|375455_376172_+|phosphatase-PAP2-family-protein
MTRPQALLAVSLAFVATAVYAVMWVGHSQDWGWLHSFDWSLLNAAHDIGIKNPAWVRFWDGVSLILGPVVLRPLGLLAAMVALAKRKIRIALLLLACLPLNAIMTIAAKSVAHRPRPATALVSAHSTSFPSGHALEATASVLALLTVLLPMLHSRFTRHIAITVGALCVLTVGVARVALNVHHPTDVVAGWALGYLYFLVCLCVFRPPSIFGAQRASHALSPPVEVSRQPEPEVDTAR
>NZ_CP012506.2|WP_003401597.1|376273_376930_+|L,D-transpeptidase
MSRLLALLCAAVCTGCVAVVLAPVSLAVVNPWFANSVGNATQVVSVVGTGGSTAKMDVYQRTAAGWQPLKTGITTHIGSAGMAPEAKSGYPATPMGVYSLDSAFGTAPNPGGGLPYTQVGPNHWWSGDDNSPTFNSMQVCQKSQCPFSTADSENLQIPQYKHSVVMGVNKAKVPGKGSAFFFHTTDGGPTAGCVAIDDATLVQIIRWLRPGAVIAIAK
>NZ_CP012506.2|WP_003401601.1|376999_377491_-|nuclear-transport-factor-2-family-protein
MCCNGVVTPGDPADIAAIKQLKYRYLRALDTKHWDDFTDTLAEDVTGDYGSSVGTELHFTNRADLVDYLRQALGPGVITEHRVTHPEITVTGDTATGIWYLQDRVIVAEFNFMLIGAAFYHDQYRRTTDGWRISATGYDRTYEATMSLAGLNFNIRPGRALAD
>NZ_CP012506.2|WP_003902650.1|377514_378744_+|hypothetical-protein
MSQSRYAGLSRSELAVLLPELLLIGQLIDRSGMAWCIQAFGRQEMLQIAIEEWAGASPIYTKRMQKALNFEGDDVPTIFKGLQLDIGAPPQFMDFRFTLHDRWHGEFHLDHCGALLDVDPMGDDYVVGMCHTIEDPTFDATAIATNPRAQVRPIHRPPRKPADRHPHCAWTVIIDESYPEAEGIPALDAVRETKAATWELDNVDASDDGLVDYSGPLVSDLDFGAFSHSALVRMADEVCLQMHLLNLSFAIAVRKRAKADAQLAISVNTRQLIGVAGLGAERIHRAMALPGGIEGALGVLELHPLLNPAGYVLAETSPDRLVVHNSPAHADGAWISLCTPASVQPLQAIATAVDPHLKVRISGTDTDWTAELIEADAPASELPEVLVAKVSRGSVFQFEPRRSLPLTVK
>NZ_CP012506.2|WP_003900119.1|378898_380761_+|Hsp70-family-protein
MYDPLGLSIGTTNLVAAGNGGPPVTRRAVLTLYPHCAPKIGVPSQNPNLIEPGALMSGFVERIGDAVALVSPDGSVHDPDLLLVEALDAMVLTAGADASSSEIAIAVPAHWKPGAVHALRNGLRTHVGFVRSGMAPRLVSDAIAALTAVNSELGLPHGSVVGLLDFGGSATYVTLVETKSDSRTSDFQPVSATARYQDFSGSQIDQALLLRVIDQFGYGDDVDPASTAAVGQLGQLREQCRAAKERLSTDVATELFAELAGCSSSIEMTREQLEDLIQDPLTGFIYAFDDMLARHNASWADLAAVVTVGGGANIPLVTQRLSFHTRRPVLTASQPGCAAAMGALLLANRGGERDSRTRTSIGLATAAAAGTSVIELPAGDVMVIDHEALTDRELAWSQTDFPSEAPARFEGDSYNEGGPCWSMRLNAVEPPKGPAWRRIRVSQLLIGVSAVVAMTAIGGVALTLTAIERRPSPLPTPIVPGLAPMPPGSVVPSSRAPTPPPPPSTVAPLPSAAPAPTTVAPAPPPPTQVVTTTTAPPVTTTPRPSPTTTTTTAPPSTTTTTEPPVTTTSTIPTIPTTTTTVKMTTEWLHVPFLPVPIPVPIPQNPGAGEPQNPFGSLGSG
>NZ_CP012506.2|WP_003401613.1|380832_381219_+|hypothetical-protein
MGDYGPFGFDPDEFDRVIREGSEGLRDAFERIGRFLSSSGAGTGWSAIFEDLSRRSRPAPETAGEAGDGVWAIYTVDADGGARVEQVYATELDALRANKDNTDPKRKVRFLPYGIAVSVLDDPVDEAQ
>NZ_CP012506.2|WP_003401619.1|381221_381884_-|DUF3060-domain-containing-protein
MIVVWEHLCMNPEDDPEARIRELERPLADVARASELGGSQSGGYTYPPGPPPPPYSYGGPFGGPSPRSSSGNRAWWILAAVVVVGVLVLVGGIAAFSAQRLSQGNFVVLSPTPSVSRAVPTPTAQPATTLPPAGASLSVSGVNVNRTIACNDSIVSVSGMSNTVVITGHCTSLTVSGMRNSVTVDSVDTIEAAGFNNEVTYHSGSPKISNAGGSNSVQQG
>NZ_CP012506.2|WP_003905279.1|381944_382829_+|family-16-glycosylhydrolase
MLMPEMDRRRMMMMAGFGALAAALPAPTAWADPSRPAASAGPTPAPAAPAAATGGLLFHDEFDGPAGSVPDPSKWQVSNHRTPIKNPVGFDRPQFFGQYRDSRQNVFLDGNSNLVLRATREGNRYFGGLVHGLWRGGIGTTWEARIKFNCLAPGMWPAWWLSNDDPGRSGEIDLIEWYGNGTWPSGTTVHANPDGTAFETCPIGVDGGWHNWRVTWNPSGMYFWLDYADGIEPYFSVPATGIEDLNEPIREWPFNDPGYTVFPVLNLAVGGSGGGDPATGSYPQEMLVDWVRVF

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Crispr_ID: NZ_CP012506_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012506_5

690391-690467

TypeV-U4

Consensus_repeat	Method
TGAGGTGCGGCGTGAGCGCGGGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP012506_5

>merge|NZ_CP012506|5|690391-690467|CRISPRCasFinder
TGAGGTGCGGCGTGAGCGCGGGTAGCGCGAACGGCAAGCCGAACCGTTGGACCCTGAGGTGCGGCGTGAGCGCGGGT

>NZ_CP012506|5|2|690391-690467|CRISPRCasFinder
TGAGGTGCGGCGTGAGCGCGGGT	AGCGCGAACGGCAAGCCGAACCGTTGGACCC
TGAGGTGCGGCGTGAGCGCGGGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012506.2\|WP_003403137.1\|695519_695933_-\|type-II-toxin-antitoxin-system-VapC-family-toxin	unknown	unknown	gnl\|CDD\|350248
NZ_CP012506.2\|WP_003403128.1\|694033_695269_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|224292
NZ_CP012506.2\|WP_003900178.1\|680249_682637_-\|flippase-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|377103
NZ_CP012506.2\|WP_003905347.1\|684292_685180_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223838
NZ_CP012506.2\|WP_003403104.1\|685185_686400_+\|MCE-family-protein	unknown	unknown	gnl\|CDD\|378749
NZ_CP012506.2\|WP_003403095.1\|683493_684291_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223838
NZ_CP012506.2\|WP_003403052.1\|676753_677440_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378485
NZ_CP012506.2\|WP_003900973.1\|696269_696776_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_CP012506.2\|WP_003403139.1\|695929_696166_-\|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|224913
NZ_CP012506.2\|WP_003403047.1\|676286_676694_+\|PIN-domain-containing-protein	unknown	unknown	gnl\|CDD\|350263
NZ_CP012506.2\|WP_003403122.1\|693204_693597_-\|type-II-toxin-antitoxin-system-VapC-family-toxin	unknown	unknown	gnl\|CDD\|350335
NZ_CP012506.2\|WP_003403125.1\|693593_693851_-\|type-II-toxin-antitoxin-system-Phd/YefM-family-antitoxin	unknown	unknown	gnl\|CDD\|226603
NZ_CP012506.2\|WP_003403148.1\|697403_698165_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP012506.2\|WP_003403107.1\|686396_687428_+\|MCE-family-protein	unknown	unknown	gnl\|CDD\|224380
NZ_CP012506.2\|WP_003900181.1\|687424_688870_+\|virulence-factor-Mce-family-protein	unknown	unknown	gnl\|CDD\|273384
NZ_CP012506.2\|WP_003403164.1\|698221_698533_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377032
NZ_CP012506.2\|WP_003403065.1\|682774_683497_+\|FadR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225097
NZ_CP012506.2\|WP_003403144.1\|696889_697360_-\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|236751
NZ_CP012506.2\|WP_003403055.1\|677593_680227_+\|glycosidase	unknown	unknown	gnl\|CDD\|226067
NZ_CP012506.2\|WP_003905349.1\|691602_693153_+\|MCE-family-protein	unknown	unknown	gnl\|CDD\|224380

Protein	Function_ID	Function_description	E-value
NZ_CP012506.2\|WP_003403137.1\|695519_695933_-\|type-II-toxin-antitoxin-system-VapC-family-toxin	gnl\|CDD\|350248	cd18681, PIN_MtVapC27-VapC40_like, VapC-like PIN domain of Mycobacterium tuberculosis VapC27, and VapC40, and related proteins. This subfamily includes Mycobacterium tuberculosis VapC27 and VapC40. It belongs to the VapC (virulence-associated protein C)-like family of the PIN domain nuclease superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include FitB toxin of the FitAB TA system, eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	9.76945e-42
NZ_CP012506.2\|WP_003403128.1\|694033_695269_-\|ATP-binding-protein	gnl\|CDD\|224292	COG1373, COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only].	1.27416e-77
NZ_CP012506.2\|WP_003900178.1\|680249_682637_-\|flippase-like-domain-containing-protein	gnl\|CDD\|377103	pfam03706, LPG_synthase_TM, Lysylphosphatidylglycerol synthase TM region. LPG_synthase_TM is the N-terminal region of this family of bacterial phosphatidylglycerol lysyltransferases. The function of the family is to add lysyl groups to membrane lipids, and this region is the transmembrane domain of 7xTMs. In order to counteract attack by membrane-damaging external cationic antimicrobial molecules - from host immune systems, bacteriocins, defencins, etc - bacteria modify their anionic membrane phosphatidylglycerol with positively-charged L-lysine; this results in repulsion of the foreign cationic peptides.	2.17737e-22
NZ_CP012506.2\|WP_003905347.1\|684292_685180_+\|ABC-transporter-permease	gnl\|CDD\|223838	COG0767, Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism].	2.44952e-83
NZ_CP012506.2\|WP_003403104.1\|685185_686400_+\|MCE-family-protein	gnl\|CDD\|378749	pfam11887, Mce4_CUP1, Cholesterol uptake porter CUP1 of Mce4, putative. Mce4_CUP1 is a family of putative Mce4 transporters of cholesterol. The domain is found associated with pfam02470. The full TCDB classification for this family in conjunction with PF02470 is TC:3.A.1.27.4.	1.49168e-114
NZ_CP012506.2\|WP_003403095.1\|683493_684291_+\|ABC-transporter-permease	gnl\|CDD\|223838	COG0767, Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism].	9.02403e-82
NZ_CP012506.2\|WP_003403052.1\|676753_677440_-\|hypothetical-protein	gnl\|CDD\|378485	pfam10738, Lpp-LpqN, Probable lipoprotein LpqN. This family is conserved in Mycobacteriaceae and is likely to be a lipoprotein.	5.50369e-72
NZ_CP012506.2\|WP_003900973.1\|696269_696776_-\|sensor-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	1.10494e-27
NZ_CP012506.2\|WP_003403139.1\|695929_696166_-\|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein	gnl\|CDD\|224913	COG2002, AbrB, Regulators of stationary/sporulation gene expression [Transcription].	1.50922e-07
NZ_CP012506.2\|WP_003403047.1\|676286_676694_+\|PIN-domain-containing-protein	gnl\|CDD\|350263	cd18696, PIN_MtVapC26-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC26 and related proteins. Mycobacterium tuberculosis VapC26 cleaves 23S rRNA in the Sarcin-Ricin Loop, it is inhibited by the cognate VapB26 antitoxin. This subfamily belongs to the VapC (virulence-associated protein C)-like nuclease family of the PIN domain-like superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include FitB toxin of the FitAB TA system, eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The PIN domain belongs to a large nuclease superfamily. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	2.4948e-60
NZ_CP012506.2\|WP_003403122.1\|693204_693597_-\|type-II-toxin-antitoxin-system-VapC-family-toxin	gnl\|CDD\|350335	cd18768, PIN_MtVapC4-C5-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC4, VapC5, and related proteins. This subfamily includes the Virulence associated protein C (VapC)-like PIN (PilT N terminus) domain of Mycobacterium tuberculosis VapC4 and VapC5 toxin of the VapBC toxin/antitoxin (TA) system. This family belongs to the PIN_VapC4-5_FitB-like subfamily of the VapC (virulence-associated protein C)-like family of the PIN domain nuclease superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. M. tuberculosis VapC4 interacts with, and cleaves tRNA44Cys-GCA. M. tuberculosis VapC5 has endonucleolytic activity with RNA, this activity is low with dsRNA, and no activity has been demonstrated on dsDNA. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	5.73431e-57
NZ_CP012506.2\|WP_003403125.1\|693593_693851_-\|type-II-toxin-antitoxin-system-Phd/YefM-family-antitoxin	gnl\|CDD\|226603	COG4118, Phd, Antitoxin of toxin-antitoxin stability system [Cell division and chromosome partitioning].	2.38527e-16
NZ_CP012506.2\|WP_003403148.1\|697403_698165_-\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	3.00442e-84
NZ_CP012506.2\|WP_003403107.1\|686396_687428_+\|MCE-family-protein	gnl\|CDD\|224380	COG1463, Ttg2C, ABC-type transport system involved in resistance to organic solvents, periplasmic component [Secondary metabolites biosynthesis, transport, and catabolism].	4.80905e-74
NZ_CP012506.2\|WP_003900181.1\|687424_688870_+\|virulence-factor-Mce-family-protein	gnl\|CDD\|273384	TIGR00996, Mtu_fam_mce, virulence factor Mce family protein. Members of this paralogous family are found as six tandem homologous proteins in the same orientation per cassette, in four separate cassettes in Mycobacterium tuberculosis. The six members of each cassette represent six subfamilies. One subfamily includes the protein mce (mycobacterial cell entry), a virulence protein required for invasion of non-phagocytic cells. [Cellular processes, Pathogenesis].	1.51384e-92
NZ_CP012506.2\|WP_003403164.1\|698221_698533_+\|hypothetical-protein	gnl\|CDD\|377032	pfam03413, PepSY, Peptidase propeptide and YPEB domain. This region is likely to have an protease inhibitory function (personal obs:C Yeats). This model is likely to miss some members of this family as the separation from signal to noise is not clear. The name is derived from Peptidase & Bacillus subtilis YPEB.	0.00241752
NZ_CP012506.2\|WP_003403065.1\|682774_683497_+\|FadR-family-transcriptional-regulator	gnl\|CDD\|225097	COG2186, FadR, Transcriptional regulators [Transcription].	4.76819e-52
NZ_CP012506.2\|WP_003403144.1\|696889_697360_-\|HAMP-domain-containing-protein	gnl\|CDD\|236751	PRK10755, PRK10755, two-component system sensor histidine kinase PmrB.	1.39186e-13
NZ_CP012506.2\|WP_003403055.1\|677593_680227_+\|glycosidase	gnl\|CDD\|226067	COG3537, COG3537, Putative alpha-1,2-mannosidase [Carbohydrate transport and metabolism].	0
NZ_CP012506.2\|WP_003905349.1\|691602_693153_+\|MCE-family-protein	gnl\|CDD\|224380	COG1463, Ttg2C, ABC-type transport system involved in resistance to organic solvents, periplasmic component [Secondary metabolites biosynthesis, transport, and catabolism].	2.23163e-80

>NZ_CP012506.2|WP_003900181.1|687424_688870_+|virulence-factor-Mce-family-protein
MRTLTEFNRGRVGMMGAVVTVLVVGVAQSFTSVPMLFATPTYYAQFADTGGINTGDKVEIAGVNVGLVRSLAIRGNRVLIGFSLPGKTIGMQSRAAIRTDTILGRKNLEIEPRGSEPLKPNGFLPLAQTTTPYQIYDAFVDVTKAATGWDIDAVKRSLNVLSETFDQTAPHLSAALEGVKAFSDTVGRRGEQIEQLLANANRIARVLGDRSEQVNGLLVNAKTLLAAFKQRSQALRILLTNVSEASAQVSGLITDNPNLNHVLAQLRTVSEELVKRKNELADVAVLLGRYTAALTEAVGSGPFFKAMVVNLLPYQILQPWVDAAFKKRGIDPENFWRSAGLPEFRWPDPNGTRFPNGAPPAAPPVREGTPKHPGPAVPPGTPCSYTPAAGALPRPDTPLPCAGATVGPFGGPDFPAPLDVQPSPPNPDGPPPTPGILSAGRPGEPAPAVPGIPMPLPPNAPPGARTQPLEPFPDGTGGSNQ
>NZ_CP012506.2|WP_003403107.1|686396_687428_+|MCE-family-protein
MKTTGTTIKLGIVWLVLSVFTVMIIVVFGQVRFHHTTGYSAVFTHVSGLRAGQFVRAAGVEVGKVAKVTLIDGDKQVLVDFTVDRSLSLDQATTASIRYLNLIGDRYLELGRGHSGQRLAPGATIPLEHTHPALDLDALLGGFRPLFQTLDPDKVNSIASSIITVFQGQGATINDILDQTASLTATLADRDHAIGEVVNNLNTVLATTVKHQTEFDRTVDKLEVLITGLKNRADPLAAAAAHISSAAGTLADLLGADRPLLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVNGLQPGGPVRTVKLFGQPTGRCTPQ
>NZ_CP012506.2|WP_003403104.1|685185_686400_+|MCE-family-protein
MPTLVTRKNRRAWLYVEGVVLLLVGALVLVLVYKQFRGEFTPKTELTMVASRAGLVMEAGSKVTYNGVEIGRVGSISEIERDGRPAAKLVLDVNPRYISLIPVNVVADIEAATLFGNKYVALSAPKIPQQQRISSHDVIDVGSVTTEFNTLFETITSIAEKVDPIELNATLSAVAQALDGLGGKFGESIVNGNQILAQLNPRLPQLGYDVRRLADLGEVYVDASPDLWSFLQNALTTARTLTSQQRDLDAALLAATGAGNTGEDVFARGGPYLARAAADLVPTATLLDTYSPELFCMIRNFHDAAPKVADAVGGNGYSLAAAGTILGAPNPYVYPDNLPRVNAHGGPGGRPGCWQTITRELWPAPYLVMDTGASLAPYNHVELGQPMFTEYVWGRQYGENTINP
>NZ_CP012506.2|WP_003905347.1|684292_685180_+|ABC-transporter-permease
MVESSTASAAAVLRARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYRRETLRLVAEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVETFTGFFAALANTRVAAPIVSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLYALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMITHCYYGYTASGGPVGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDPNFNLTV
>NZ_CP012506.2|WP_003403095.1|683493_684291_+|ABC-transporter-permease
MTTHAVIITYLRDQTQPAVDAIGGFYRTCVLTGKALVRRPFHWREAIEQGWFITSVSLLPTLAVSIPLTVLIIFTLNILLAEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGATAICADLGARTIREEIDAMEVLGIDPIHRLVVPRVVAATIVAALLNGAVITIGLVGGFVFSVFIQHVSAGAYVGTLTLVTGLPEVIISVVKSATFGLIAGLVGCYRGLTTKGGPKGVGTAVNETLVLCVIALFATNVVLTTIGVRFGTGH
>NZ_CP012506.2|WP_003403065.1|682774_683497_+|FadR-family-transcriptional-regulator
MALQPVTRRSVPEEVFEQIATDVLTGEMPPGEALPSERRLAELLGVSRPAVREALKRLSAAGLVEVRQGDVTTVRDFRRHAGLDLLPRLLFRNGELDISVVRSILEARLRNFPKVAELAAERNEPELAELLQDSLRALDTEEDPIVWQRHTLDFWDHVVDSAGSIVDRLMYNAFRAAYEPTLAALTTTMTAAAKRPSDYRKLADAICSGDPTGAKKAAQDLLELANTSLMAVLVSQASRQ
>NZ_CP012506.2|WP_003900178.1|680249_682637_-|flippase-like-domain-containing-protein
MRVDGRDIGVSGNLLQPLTRRTNDIIRAVLAAIYLVAVITSSLITRPQWVALEKSISEIVGVLSPSQSDLVYLGYGLAILALPFVILIGLIVSRQWKLLGAYAAAGLMAVLPLSISSSRIAAPRWHFDLSDRLATLLAQFLDDPRWIAMLAAVLTVSGPWLPARWRHWWWALLLAFVPIHLVVSAIVPARSLLGLAVGWLVGALVVLVVGTPALEVPLDGAIRALAKRGFAVSGLAVVRPAGPGPLVLSAACEQPNAGACSEALIELYGPHQSGGGALRQLWLKLTLRGTETAPLQASMRRAVEHRALMAIAFGDLGMANTTVIAVSPLDRGWTLYAHRPARGIGISECTKTTPTAHVWEALRTLHDQQISHGDLCSAEITVDNGAVLFGGFGEAEYGATDAQLQSDLAQLLVTTSALYDAEAAVTAAIDTFGKQAILAASRRLTKSAVPKRIRESITDPNAVIASTRAEVMRQTGADQIKAETITRFSRGQLIQLVLIGALVYVAYPFISTVPTFFSQLRTANWWWALLGLAVSALTYVGAAAALWACADGLVGFWKLSIMQVANTFAATTTPAGVGGLALSTRFLQKGGLTAVRATAAVALQQSVQVIVHLVLLILFSALAGTSTDLSHFVPNATVLYLIAGVALGIVGTFLFVPKLRRWLATAVRPKLREVTNDLIALAREPKRLALIVLGCAGTTLGAALALWASIEAFGGGTTFVTVTVVTMVGGTLASAAPTPGGVGAVEAALIGGLAAFGVPAALGVPSVLLYRLLTCWLPVFAGWQVMHWLTRHEMI
>NZ_CP012506.2|WP_003403055.1|677593_680227_+|glycosidase
MRARRLRRALAALLAVAGLFVPFIVGVPTAYDGEPVFVAIPVEHVNTLIGTGTGAAIVGEINNFPGASVPFGMVQYSPDTVDNYAGYDYDNPHSTGFSMTHASVGCPAFGDISMLPTTTPLGSQPWSAWEEIAHDDTEVGVPGYYTVRFPGTGVIAELTATTRTGVGRFRYPRNGWPALFHVRSGASLAGNYAATLQIEDNTTITGSATSGGFCGKKNLYTVYFAMKFSQPFSSYGTWDGYAVYPGSHSMNSSYSGGYVGFPAGSVLEVRTALSYVSVDGARANLDAEGGASFDDIRAATSSEWNAALSRIAVAGRGPGDVDTFYTCLYRSLLHPNTFNDVDGRYIGFDGVIHSVASGHTHYANFSDWDTYRSLAPLQGLLFPQRASDMIQSLVTDAEQSGAYPRWALANSATGMMSGDSVVPLIVNLYAFGARDFDLKSALHYMVNAATQGGVGLDGFLERPGIAAYLRLGYGPQTAEFRANGRIAGASVTLEWSVDDFAISRFADSLGDTATAAVFQNRSQYWQNLFNPTTGYISPRSAAGFFPDGPGFVAYPSGFGQDGYDEGNAEQYLWWVPHNVAGLVTALGGRTAVVKRLDRFTKKLNVGPNEPYLWAGNEPGFGVPWLYNYIGQPWKTQRTVDRVRGLFGPTPGGAPGNDDLGALSSWYVWAALGLYPSTPGTTILTVNTPLFDRAVIALPTGKSIQITAPGASGRNRLKYIDGLTIDRQPSNQTFLPESIVRTGGDLTFSLAGTPNKVWGTAASAAPPSFGAGSSAVTVNIARPIIGIVPGATGTVTVDAQRMIDGVDDYTVTPTSYVVGIAAEPLSGQFDDDGAVSASVAITVARSVPSGYYPIYVTTSAGDSARTLIVLVVVAEAVE
>NZ_CP012506.2|WP_003403052.1|676753_677440_-|hypothetical-protein
MKHFTAAVATVALSLALAGCSFNIKTDSAPTTSPTTTSPTTSTTTTSATTSAQAAGPNYTIADYIRDNHIQETPVHHGDPGSPTIDLPVPDDWRLLPESSRAPYGGIVYTQPADPNDPPTIVAILSKLTGDIDPAKVLQFAPGELKNLPGFQGSGDGSAATLGGFSAWQLGGSYSKNGKLRTVAQKTVVIPSQGAVFVLQLNADALDDETMTLMDAANVIDEQTTITP
>NZ_CP012506.2|WP_003403047.1|676286_676694_+|PIN-domain-containing-protein
MIIDTSALLAYFDAAEPDHAAVSECIDSSADALVVSPYVVAELDYLVATRVGVDAELAVLRELAGGAWELANCGAAEIEQAARIVTKYQDQRIGIADAANVVLADRYRTRTILTLDRRHFSALRPIGGGRFTVIP
>NZ_CP012506.2|WP_003905349.1|691602_693153_+|MCE-family-protein
MLTRAIKTQLVLLTVLAVIAVVVLGWYFLRIPSLVGIGRYTLYAELPRSGGLYRTANVTYRGITIGKVTGVEPTERGARATMSIDNGYQIPTDASANVHSVSAVGEQFVDLVSTRTSGPYLRHGQTITTTTVPSQIGPALDAANRGLAVLPKDRVASVLHEASEAVGGLGSSLNRLIEATQAIAHDVRGSLEDIDDIIERSAPIIDSQVNSGNEIARWAANLNTLAAQTAQTDPAVRSILANAAPTADQVNATFSDVRESLPQTLANLEVVIDMLKRYHNGVEQALVFLPQSGAIAQSVTTEFPGQAGLGVGGLALNQPPPCLTGFLPASEWRSPADTSTAPLPKGTYCRIPMDASNVVRGARNNPCVDVPGKRAATPRECRSNEAYVPGGTNPWYGDPNQMLSCPAPAARCDQPVKPGQVIPAPSVNNGISPLPADQLPGTPPPVNDPLQRPGSGTVQCNGQQPNPCVYTPSTFPTTIYDVQSGKVVAPDGVVYSVEASTHAGADGWKVMLAPTG
>NZ_CP012506.2|WP_003403122.1|693204_693597_-|type-II-toxin-antitoxin-system-VapC-family-toxin
MNVRRALADTSVFIGIEATRFDPDRFAGYEWGVSVVTLGELRLGVLQASGPEAAARRLSTYQLAQRFEPLGIDEAVSEAWALLVSKLRAAKLRVPINDSWIAATAVAHGIAILTQDNDYAAMPDVEVITI
>NZ_CP012506.2|WP_003403125.1|693593_693851_-|type-II-toxin-antitoxin-system-Phd/YefM-family-antitoxin
MSATIPARDLRNHTAEVLRRVAAGEEIEVLKDNRPVARIVPLKRRRQWLPAAEVIGELVRLGPDTTNLGEELRETLTQTTDDVRW
>NZ_CP012506.2|WP_003403128.1|694033_695269_-|ATP-binding-protein
MGVVERAIAPSVLAALADTPVVVVNGARQVGKTTLVARLDYPGSSEVVSLDDVANRDAARDDPRAFVSRPVDTLVIDEAQLEPGLFRAIKAEVDRDRRPGRFLLTGSARLLSAPDMADALVGRVEIIELWPFSQGERAGIADGFVDALFTAPRELIHGSDMRRADLVDRIATGGFPDIVARSPSRRRAWFDNYLTTATQSVIREISPIERLAEMPRVLRLCAARTGAELNVSALANDLSIPARTTAGYLALLEAAFLIHRVPAWSTNLSRKVIRRPKLVVSDSGLACHLLGVTGATLDRPGRPLGPLLETFVANEIRKQLTWSTERPSLWHFRDRGGAEVDLVLEHPDGRVCGIEVKATSTPRAEDLRGLRYLAERLDDRFQFGVLLTAAPEATPFGPTLAALPVSTLWAG
>NZ_CP012506.2|WP_003403137.1|695519_695933_-|type-II-toxin-antitoxin-system-VapC-family-toxin
MKPPLAVDTSVAIPLLVRTHTAHAAVVAWWAHREAALCGHALAETYSVLTRLPRDLRLAPMDAARLLTERFAAPLLLSSRTTEHLPRVLAQFEITGGAVYDALVALAAAEHRAELATRDARAKDTYEKIGVHVVVAA
>NZ_CP012506.2|WP_003403139.1|695929_696166_-|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein
MKAVVDAAGRIVVPKPLREALGLQPGSTVEISRYGAGLHLIPTGRTARLEEENGVLVATGETTIDDEVVFGLIDSGRK
>NZ_CP012506.2|WP_003900973.1|696269_696776_-|sensor-histidine-kinase
MPITPLLHESVARFAATGADITTRAEPDLFVSIDPDHLRRILTAVLDNAITHGDGEIAVTAHARDGAVDIGVRDHGPGFADHFLPVAFDRFTRADTARGGRGSGLGLAIVAALTTTHGGHANATNHPDGGAELRITLPTPRPPFHEELPRITSSDTKDPNREHDTSDQ
>NZ_CP012506.2|WP_003403144.1|696889_697360_-|HAMP-domain-containing-protein
MALVLAAAGAVTVVQFRDAAHEADPDGALRGLTDDITADLVRELVTILPIVLVIAAVAAYLLSRAALRPVDRIRAAAQTLTTTPHPDTDAPLPVPPTDDEIAWLATTLNTMLTRLQRALAHEQQFVADASHELRTPLALLTTELELRCAGPDPPTS
>NZ_CP012506.2|WP_003403148.1|697403_698165_-|response-regulator-transcription-factor
MADETTMRAGRGPGRACGRVSGVRILVVEDEPKMTALLARALTEEGHTVDTVADGRHAVAAVDGGDYDAVVLDVMLPGIDGFEVCARLRRQRVWTPVLMLTARGAVTDRIAGLDGGADDYLTKPFNLDELFARLRALSRRGPIPRPPTLEAGDLRLDPSEHRVWRADTEIRLSHKEFTLLEALIRRPGIVHTRAQLLERCWDAAYEARSNIVDVYIRYLRDKIDRPFGVTSLETIRGAGYRLRKDGGRHALPR
>NZ_CP012506.2|WP_003403164.1|698221_698533_+|hypothetical-protein
MNRIVQFGVSAVAAAAIGIGAGSGIAAAFDGEDEVTGPDADRARAAAVQAVPGGTAGEVETETGEGAAAYGVLVTRPDGTRVEVHLDRDFRVLDTEPADGDGG

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Crispr_ID: NZ_CP012506_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012506_6

1570804-1571876

Orphan

Consensus_repeat	Method
CCGCCGTTGCCGCCGGCACCGCCGTCGCCGAT	CRISPRCasFinder

15 spacers

The CRISPR arrays of NZ_CP012506_6

>merge|NZ_CP012506|6|1570804-1571876|CRISPRCasFinder
CCCCCGGTCCCGCCGACGCCGCCGCCCCCGCCGTTGCCGGGGGTGCCATCGTTGCCGGCCCCACCGTTTCCGCCGGCGCCGCCGCCCCCGCCGTTGCCGATTAGGACGGCGGCCCCACCGTTTCCGCCGGTCCCGCCGTTGCCGCCGGTACCGTCCTCGCCGGCGGTGCCGCCCTTTCCGCCGGTCCCGCCGGTCCCGGCGTCGCCGATCAGGCCGGCGGCACCGCCTCGCCCGCCGGTCCCGCCGGCGCCGCCCTTGCCGAACACGCCGAAGCCGTCGCCGCCCTTGCCGCCGGTGCCGCCGGTGCCGCCGGTGCCGTAGAGTTGTCCGCCGTTGCCACCGGCCCCGCCGGCACCACCAATTCCGCCATTGCCGTCGGGCCCCTGGGCGCTGTGCCCGCCGGCCCCGCCGGTGCCGCCGTGGCCAATCAGACCGGCGGACCCGCCGGCTCCGCCAGCACCGCCAAGACCGTTCGGACTGGTGACGGTCCCGCCTGCCCCCCCGGTGCCGCCGTTGCCAATGAGTTGCCCACCAGCGCCGCCGGCTCCACCGGCGCCGCCGCCCTGGCCACGGATATCACCGCCGTTGCCGCCGGCACCGCCGTCGCCGATCAGCCAGGCATTGCCACCGGCCCCGCCGGCGCCGCTAATTGCGCCTTGCCCGCCGTTGCCGCCGGCACCGCCGTTGCCGATGAGCCCGCCGGTACCGCCGGCACCGCCCGCGCCCCCGAAGTTATTCTCCCCGACTTTGCCTCCAACCCCAGTTTGCCCGCCGCGCCCGCCGGCCCCGCCGCTGCCCGACAGGCCGCGGCCGTCGCCGCCGGTGCCGCCGGCCCCGCCGTTGCCTCCTGAGCTGACGCCGGTTCCGCCCTGCCCGCCGTGTCCGCCGGCGCCGCCGTCGCCGTGCAGCCAGCCACCACCGCCACCGGCGCCGCCGATACCCCCCGTGCCGCCGTCGCCGGACTTGCCGCCACCGACCCCCCCTTGCCCGCCGGTGCCGCCGGACCCTCCGCTGCCCCACAATCCGGCGGCGCCGCCGGCACCGCCGGCACCGCCGACACCACCGGGGTCGCC

>NZ_CP012506|6|3|1570804-1571876|CRISPRCasFinder
CCCCCGGTCCCGCCGACGCCGCCGCCCCCGCC	GTTGCCGGGGGTGCCATCGTTGCCGGCC
CCACCGTTTCCGCCGGCGCCGCCGCCCCCGCC	GTTGCCGATTAGGACGGCGGCC
CCACCGTTTCCGCCGGTCCCGCCGTTGCCGCC	GGTACCGTCCTCGCCGGCGGTG
CCGCCCTTTCCGCCGGTCCCGCCGGTCCCGGC	GTCGCCGATCAGGCCGGCGGCA
CCGCCTCGCCCGCCGGTCCCGCCGGCGCCGCC	CTTGCCGAACACGCCGAAGCCGTCG
CCGCCCTTGCCGCCGGTGCCGCCGGTGCCGCC	GGTGCCGTAGAGTTGTCCGCCGTTGCCACCGGCCCCGCCGGCACCACCAATTCCGCCATTGCCGTCGGGCCCCTGG
GCGCTGTGCCCGCCGGCCCCGCCGGTGCCGCC	GTGGCCAATCAGACCGGCGGAC
CCGCCGGCTCCGCCAGCACCGCCAAGACCGTT	CGGACTGGTGACGGTCCCGCCTGCCCCCCCGGTGCCGCCGTTGCCAATGAGTTGC
CCACCAGCGCCGCCGGCTCCACCGGCGCCGCC	GCCCTGGCCACGGATATCACCGCCGTTGCCGCCGGCACCGCCGTCGCCGATCAGC
CAGGCATTGCCACCGGCCCCGCCGGCGCCGCT	AATTGCGCCTTGCCCGCCGTTGCCGCCGGCA
CCGCCGTTGCCGATGAGCCCGCCGGTACCGCC	GGCACCGCCCGCGCCCCCGAAGTTATTCTCCCCGACTTTGCCTCCAACCCCAGTTTGC
CCGCCGCGCCCGCCGGCCCCGCCGCTGCCCGA	CAGGCCGCGGCCGTCGCCGCCGGTGCCGCCGGCCCCGCCGTTGCCTCCTGAGCTGACGCCGGTT
CCGCCCTGCCCGCCGTGTCCGCCGGCGCCGCC	GTCGCCGTGCAGCCAGCCACCACCGCCACCGGCG
CCGCCGATACCCCCCGTGCCGCCGTCGCCGGA	CTTGCCGCCACCGACCCCCCCTTGC
CCGCCGGTGCCGCCGGACCCTCCGCTGCCCCA	CAATCCGGCGGCGCCGCCGGCA
CCGCCGGCACCGCCGACACCACCGGGGTCGCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012506.2\|WP_003407260.1\|1568202_1569588_-\|cytochrome-P450	unknown	unknown	gnl\|CDD\|225035
NZ_CP012506.2\|WP_003900331.1\|1563019_1563646_+\|guanylate-kinase	unknown	unknown	gnl\|CDD\|234719
NZ_CP012506.2\|WP_003898861.1\|1572730_1573132_-\|type-II-toxin-antitoxin-system-VapC-family-toxin	unknown	unknown	gnl\|CDD\|350308
NZ_CP012506.2\|WP_003407264.1\|1569665_1570700_+\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197666
NZ_CP012506.2\|WP_003407225.1\|1560082_1560391_+\|PE-family-protein	unknown	unknown	gnl\|CDD\|376422
NZ_CP012506.2\|WP_003407282.1\|1575548_1576151_+\|lysoplasmalogenase	unknown	unknown	gnl\|CDD\|226237
NZ_CP012506.2\|WP_003407248.1\|1563711_1564044_+\|DNA-directed-RNA-polymerase-subunit-omega	unknown	unknown	gnl\|CDD\|188073
NZ_CP012506.2\|WP_003905554.1\|1574452_1575415_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|369561
NZ_CP012506.2\|WP_003905549.1\|1560387_1562007_+\|PPE-family-protein	unknown	unknown	gnl\|CDD\|227938
NZ_CP012506.2\|WP_003407285.1\|1576231_1578199_+\|primosomal-protein-N'	unknown	unknown	gnl\|CDD\|237844
NZ_CP012506.2\|WP_003407276.1\|1573468_1574428_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|369561
NZ_CP012506.2\|WP_003900336.1\|1580784_1581723_+\|methionyl-tRNA-formyltransferase	unknown	unknown	gnl\|CDD\|234567
NZ_CP012506.2\|WP_003407272.1\|1573128_1573386_-\|CopG-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|279710
NZ_CP012506.2\|WP_003898859.1\|1564059_1565316_+\|bifunctional-phosphopantothenoylcysteine-decarboxylase/phosphopantothenate--cysteine-ligase-CoaBC	unknown	unknown	gnl\|CDD\|235513
NZ_CP012506.2\|WP_003407295.1\|1579209_1579692_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_CP012506.2\|WP_003407240.1\|1562567_1562885_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012506.2\|WP_003407257.1\|1566727_1568206_-\|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|224983
NZ_CP012506.2\|WP_025096405.1\|1565443_1566655_+\|methionine-adenosyltransferase	unknown	unknown	gnl\|CDD\|235374
NZ_CP012506.2\|WP_003407292.1\|1578216_1579041_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
NZ_CP012506.2\|WP_003407297.1\|1579763_1580588_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312

Protein	Function_ID	Function_description	E-value
NZ_CP012506.2\|WP_003407260.1\|1568202_1569588_-\|cytochrome-P450	gnl\|CDD\|225035	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism].	3.46688e-73
NZ_CP012506.2\|WP_003900331.1\|1563019_1563646_+\|guanylate-kinase	gnl\|CDD\|234719	PRK00300, gmk, guanylate kinase; Provisional.	8.01602e-101
NZ_CP012506.2\|WP_003898861.1\|1572730_1573132_-\|type-II-toxin-antitoxin-system-VapC-family-toxin	gnl\|CDD\|350308	cd18741, PIN_VapC4-5_FitB-like, uncharacterized subgroup of the PIN_VapC4-5_FitB-like subfamily of the PIN domain superfamily. The PIN_VapC4-5_FitB-like subfamily includes the Virulence associated protein C (VapC)-like PIN (PilT N terminus) domain of Mycobacterium tuberculosis VapC4 and VapC5 ribonuclease toxins of the VapBC toxin/antitoxin (TA) system, and Neisseria gonorrhoeae FitB toxin of the FitAB TA system. This subfamily belongs to the VapC-like family of the PIN domain nuclease superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	2.0663e-47
NZ_CP012506.2\|WP_003407264.1\|1569665_1570700_+\|AraC-family-transcriptional-regulator	gnl\|CDD\|197666	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein.	1.2925e-21
NZ_CP012506.2\|WP_003407225.1\|1560082_1560391_+\|PE-family-protein	gnl\|CDD\|376422	pfam00934, PE, PE family. This family named after a PE motif near to the amino terminus of the domain. The PE family of proteins all contain an amino-terminal region of about 110 amino acids. The carboxyl terminus of this family are variable and fall into several classes. The largest class of PE proteins is the highly repetitive PGRS class which have a high glycine content. The function of these proteins is uncertain but it has been suggested that they may be related to antigenic variation of Mycobacterium tuberculosis.	6.65327e-12
NZ_CP012506.2\|WP_003407282.1\|1575548_1576151_+\|lysoplasmalogenase	gnl\|CDD\|226237	COG3714, COG3714, Predicted membrane protein [Function unknown].	2.43759e-45
NZ_CP012506.2\|WP_003407248.1\|1563711_1564044_+\|DNA-directed-RNA-polymerase-subunit-omega	gnl\|CDD\|188073	TIGR00690, DNA-directed_RNA_polymerase_subunit_omega, DNA-directed RNA polymerase, omega subunit. This small component of highly purified E. coli RNA polymerase is not required for transcription, but acts in assembly and is present in stochiometric amounts. The trusted cutoff excludes archaeal homologs but captures some organellar sequences. [Transcription, DNA-dependent RNA polymerase].	1.81185e-20
NZ_CP012506.2\|WP_003905554.1\|1574452_1575415_-\|alpha/beta-hydrolase	gnl\|CDD\|369561	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes.	5.61732e-87
NZ_CP012506.2\|WP_003905549.1\|1560387_1562007_+\|PPE-family-protein	gnl\|CDD\|227938	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion].	2.39081e-75
NZ_CP012506.2\|WP_003407285.1\|1576231_1578199_+\|primosomal-protein-N'	gnl\|CDD\|237844	PRK14873, PRK14873, primosomal protein N'.	0
NZ_CP012506.2\|WP_003407276.1\|1573468_1574428_-\|alpha/beta-hydrolase	gnl\|CDD\|369561	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes.	7.78908e-92
NZ_CP012506.2\|WP_003900336.1\|1580784_1581723_+\|methionyl-tRNA-formyltransferase	gnl\|CDD\|234567	PRK00005, fmt, methionyl-tRNA formyltransferase; Reviewed.	5.56225e-154
NZ_CP012506.2\|WP_003407272.1\|1573128_1573386_-\|CopG-family-transcriptional-regulator	gnl\|CDD\|279710	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family. The structure of this protein repressor, which is the shortest reported to date and the first isolated from a plasmid, has a homodimeric ribbon-helix-helix arrangement. The helix-turn-helix-like structure is involved in dimerization and not DNA binding as might have been expected.	7.93081e-06
NZ_CP012506.2\|WP_003898859.1\|1564059_1565316_+\|bifunctional-phosphopantothenoylcysteine-decarboxylase/phosphopantothenate--cysteine-ligase-CoaBC	gnl\|CDD\|235513	PRK05579, PRK05579, bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated.	0
NZ_CP012506.2\|WP_003407295.1\|1579209_1579692_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	3.03006e-24
NZ_CP012506.2\|WP_003407297.1\|1579763_1580588_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	3.66024e-22
NZ_CP012506.2\|WP_003407257.1\|1566727_1568206_-\|NAD(P)/FAD-dependent-oxidoreductase	gnl\|CDD\|224983	COG2072, TrkA, Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism].	7.312e-122
NZ_CP012506.2\|WP_025096405.1\|1565443_1566655_+\|methionine-adenosyltransferase	gnl\|CDD\|235374	PRK05250, PRK05250, S-adenosylmethionine synthetase; Validated.	0
NZ_CP012506.2\|WP_003407292.1\|1578216_1579041_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	7.4474e-23

>NZ_CP012506.2|WP_003407264.1|1569665_1570700_+|AraC-family-transcriptional-regulator
MGHLPPPAEVRHPVYATRVLCEVANERGVPTADVLAGTAIEPADLDDPDAVVGALDEITAVRRLLARLPDDAGIGIDVGSRFALTHFGLFGFAVMSCGTLRELLTIAMRYFALTTMHVDITLFETADDCLVELDASHLPADVRGFFIERDIAGIIATTTSFALPLAAKYADQVSAELAVDAELLRPLLELVPVHDVAFGRAHNRVHFPRAMFDEPLPQADRHTLEMCIAQCDVLMQRNERRRGITALVRSKLFRDSGLFPTFTDVAGELDMHPRTLRRRLAEEGTSFRALLGEARSTVAVDLLRNVGLTVQQVSTRLGYTEVSTFSHAFKRWYGVAPSEYSRRG
>NZ_CP012506.2|WP_003407260.1|1568202_1569588_-|cytochrome-P450
MATATTQRPLKGPAKRMSTWTMTREAITIGFDAGDGFLGRLRGSDITRFRCAGRRFVSISHPDYVDHVLHEARLKYVKSDEYGPIRATAGLNLLTDEGDSWARHRGALNSTFARRHLRGLVGLMIDPIADVTAALVPGAQFDMHQSMVETTLRVVANALFSQDFGPLVQSMHDLATRGLRRAEKLERLGLWGLMPRTVYDTLIWCIYSGVHLPPPLREMQEITLTLDRAINSVIDRRLAEPTNSADLLNVLLSADGGIWPRQRVRDEALTFMLAGHETTANAMSWFWYLMALNPQARDHMLTELDDVLGMRRPTADDLGKLAWTTACLQESQRYFSSVWIIAREAVDDDIIDGHRIRRGTTVVIPIHHIHHDPRWWPDPDRFDPGRFLRCPTDRPRCAYLPFGGGRRICIGQSFALMEMVLMAAIMSQHFTFDLAPGYHVELEATLTLRPKHGVHVIGRRR
>NZ_CP012506.2|WP_003407257.1|1566727_1568206_-|NAD(P)/FAD-dependent-oxidoreductase
MMPDYHALIVGAGFSGIGAAIKLDRAGFSDYLVVEAGDGVGGTWHWNTYPGIAVDIPSFSYQFSFEQSRHWSRTYAPGHELKAYAEHCVDKYGIRSRIRLNTKVLAAEFDDEHSLWRVQTDPGGEITARFLISACGILTVPKLPDIDGVDSFEGVTMHTARWDHTQDLTGKRVGIIGTGASAVQVIPEMAPIVSHLTVFQRTPIWCFPKFDVPLPTAVRWAMRIPGGKAVHRLLSQAFVEATFPIAAHYFAVFPLAKHMESAGRRYLRQQVHDPVVREQLTPRYAVGCKRPGFHNTYLSTFNRDNVRLVTEPIDKITPTAVATTDGASHEIDVLVLATGFKVLDTDSIPTYAVTGTGGASLSRFWDEHRLQAYEGVSVPGYPNFFTVFGPYGYVGSSYFALIETQAHHIIRCLKRARRTGATRIEVTEEANARYFAEVMRRRHRQVFWQDSCRLANSYYFDKNGDVPLRPTTTVEAYWRSRRFDLGDYRISS
>NZ_CP012506.2|WP_025096405.1|1565443_1566655_+|methionine-adenosyltransferase
MSEKGRLFTSESVTEGHPDKICDAISDSVLDALLAADPRSRVAVETLVTTGQVHVVGEVTTSAKEAFADITNTVRARILEIGYDSSDKGFDGATCGVNIGIGAQSPDIAQGVDTAHEARVEGAADPLDSQGAGDQGLMFGYAINATPELMPLPIALAHRLSRRLTEVRKNGVLPYLRPDGKTQVTIAYEDNVPVRLDTVVISTQHAADIDLEKTLDPDIREKVLNTVLDDLAHKTLDASTVRVLVNPTGKFVLGGPMGDAGLTGRKIIVDTYGGWARHGGGAFSGKDPSKVDRSAAYAMRWVAKNVVAAGLAERVEVQVAYAIGKAAPVGLFVETFGTETEDPVKIEKAIGEVFDLRPGAIIRDLNLLRPIYAPTAAYGHFGRTDVELPWEQLDKVDDLKRAI
>NZ_CP012506.2|WP_003898859.1|1564059_1565316_+|bifunctional-phosphopantothenoylcysteine-decarboxylase/phosphopantothenate--cysteine-ligase-CoaBC
MVDHKRIPKQVIVGVSGGIAAYKACTVVRQLTEASHRVRVIPTESALRFVGAATFEALSGEPVCTDVFADVPAVPHVHLGQQADLVVVAPATADLLARAAAGRADDLLTATLLTARCPVLFAPAMHTEMWLHPATVDNVATLRRRGAVVLEPATGRLTGADSGAGRLPEAEEITTLAQLLLERHDALPYDLAGRKLLVTAGGTREPIDPVRFIGNRSSGKQGYAVARVAAQRGADVTLIAGHTAGLVDPAGVEVVHVSSAQQLADAVSKHAPTADVLVMAAAVADFRPAQVATAKIKKGVEGPPTIELLRNDDVLAGVVRARAHGQLPNMRAIVGFAAETGDANGDVLFHARAKLRRKGCDLLVVNAVGEGRAFEVDSNDGWLLASDGTESALQHGSKTLMASRIVDAIVTFLAGCSS
>NZ_CP012506.2|WP_003407248.1|1563711_1564044_+|DNA-directed-RNA-polymerase-subunit-omega
MSISQSDASLAAVPAVDQFDPSSGASGGYDTPLGITNPPIDELLDRVSSKYALVIYAAKRARQINDYYNQLGEGILEYVGPLVEPGLQEKPLSIALREIHADLLEHTEGE
>NZ_CP012506.2|WP_003900331.1|1563019_1563646_+|guanylate-kinase
MSVGEGPDTKPTARGQPAAVGRVVVLSGPSAVGKSTVVRCLRERIPNLHFSVSATTRAPRPGEVDGVDYHFIDPTRFQQLIDQGELLEWAEIHGGLHRSGTLAQPVRAAAATGVPVLIEVDLAGARAIKKTMPEAVTVFLAPPSWQDLQARLIGRGTETADVIQRRLDTARIELAAQGDFDKVVVNRRLESACAELVSLLVGTAPGSP
>NZ_CP012506.2|WP_003407240.1|1562567_1562885_+|hypothetical-protein
MALPQLTDEQRAAALEKAAAARRARAELKDRLKRGGTNLTQVLKDAESDEVLGKMKVSALLEALPKVGKVKAQEIMTELEIAPTRRLRGLGDRQRKALLEKFGSA
>NZ_CP012506.2|WP_003905549.1|1560387_1562007_+|PPE-family-protein
MTEPWIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASDGWQGQAAEAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLAVLVATNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSDELLPDTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYDDYVYPGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLGQYPQLLSAALTGVIAHLGAITGLAGLSGLSAIPSAAIPAVVPELTPVAAAPPMLAVAGVGPAVAAPGMLPASAPAPAAAAGATAAGPTPPATGFGGFPPYLVGGGGPGIGFGSGQSAHAKAAASDSAAAESAAQASARAQARAARRGRSAAKARGHRDEFVTMDMGFDAAAPAPEHQPGARASDCGAGPIGFAGTVRKEAVVKAAGLTTLAGDDFGGGPTMPMMPGTWTHDQGVFDEHR
>NZ_CP012506.2|WP_003407225.1|1560082_1560391_+|PE-family-protein
MTLRVVPESLAGASAAIEAVTARLAAAHAAAAPFIAAVIPPGSDSVSVCNAVEFSVHGSQHVAMAAQGVEELGRSGVGVAESGASYAARDALAAASYLSGGL
>NZ_CP012506.2|WP_003898861.1|1572730_1573132_-|type-II-toxin-antitoxin-system-VapC-family-toxin
MILVDSDVLIAHLRGVVAARDWLVSARKDGPLAISVVSTAELIGGMRTAERREVWRLLASFRVQPATEVIARRAGDMMRRYRRSHNRIGLGDYLIAATADVQDLQLATLNVWHFPMFEQLKPPFAVPGHRPRA
>NZ_CP012506.2|WP_003407272.1|1573128_1573386_-|CopG-family-transcriptional-regulator
MKRTNIYLDEEQTASLDKLAAQEGVSRAELIRLLLNRALTTAGDDLASDLQAINDSFGTLRHLDPPVRRSGGREQHLAQVWRATS
>NZ_CP012506.2|WP_003407276.1|1573468_1574428_-|alpha/beta-hydrolase
MTEPTVARPDIDPVLKMLLDTFPVTFTAADGVEVARARLRQLKTPPELLPELRIEERTVGYDGLTDIPVRVYWPPVVRDNLPVVVYYHGGGWSLGGLDTHDPVARAHAVGAQAIVVSVDYRLAPEHPYPAGIDDSWAALRWVGENAAELGGDPSRIAVAGDSAGGNISAVMAQLARDVGGPPLVFQLLWYPTTMADLSLPSFTENADAPILDRDVIDAFLAWYVPGLDISDHTMLPTTLAPGNADLSGLPPAFIGTAEHDPLRDDGACYAELLTAAGVSVELSNEPTMVHGYVNFALVVPAAAEATGRGLAALKRALHA
>NZ_CP012506.2|WP_003905554.1|1574452_1575415_-|alpha/beta-hydrolase
MPSLDNTADEKPAIDPILLKVLDAVPFRLSIDDGIEAVRQRLRDLPRQPVHPELRVVDLAIDGPAGPIGTRIYWPPTCPDQAEAPVVLYLHGGGFVMGDLDTHDGPCRQHAVGADAIVVSVDYRLAPEHPYPAAIEDAWAATRWVAEHGRQVGADLGRIAVAGDSAGGTIAAVIAQRARDMGGPPIVFQLLWYPSTLWDQSLPSLAENADAPILDVKAIAAFSRWYAGEIDLHNPPAPMAPGRAENLADLPPAYIAVAGYDPLRDDGIRYGELLAAAGVPVEVHNAQTLVHGYVGYAGVVPAATEATNRGLVALRVVLHG
>NZ_CP012506.2|WP_003407282.1|1575548_1576151_+|lysoplasmalogenase
MLQPAFKASMAVLLAAAAVAHPIGRERRWLVPALLLSATGDWLLAIPWWTWAFVFGLGAFLLAHLCFIGALLPLARQAAPSRGRVAAVVAMCVASAGLLVWFWPHLGKDNLTIPVTVYIVALSAMVCTALLARLPTIWTAVGAVCFAASDSMIGIGRFILGNEALAVPIWWSYAAAEILITAGFFFGREVPDNAAAPTDS
>NZ_CP012506.2|WP_003407285.1|1576231_1578199_+|primosomal-protein-N'
MLSVPHLDRDFDYLVPAEHSDDAQPGVRVRVRFHGRLVDGFVLERRSDSDHHGKLGWLDRVVSPEPVLTTEIRRLVDAVAARYAGTRQDVLRLAVPARHARVEREITTAPGRPVVAPVDPSGWAAYGRGRQFLAALADSRAARAVWQALPGELWADRFAEAAAQTVRAGRTVLAIVPDQRDLDTLWQAATALVDEHSVVALSAGLGPEARYRRWLAALRGSARLVIGTRSAVFAPLSELGLVMVWADADDSLAEPRAPYPHAREVAMLRAHQARCAALIGGYARTAEAHALVRSGWAHDVVAPRPEVRARSPRVVALDDSGYDDARDPAARTARLPSIALRAARSALQSGAPVLVQVPRRGYIPSLACGRCRAIARCRSCTGPLSLQGAGSPGAVCRWCGRVDPTLRCVRCGSDVVRAVVVGARRTAEELGRAFPGTAVITSAGDTLVPQLDAGPALVVATPGAEPRAPGGYGAALLLDSWALLGRQDLRAAEDALWRWMTAAALVRPRGAGGVVTVVAESSIPTVQSLIRWDPVGHAEAELAARTEVGLPPSVHIAALDGPAGTVTALLEAARLPDPDRLQADLLGPVDLPPGVRRPAGIPADAPVIRMLLRVCREQGLELAASLRRGIGVLSARQTRQTRSLVRVQIDPLHIG
>NZ_CP012506.2|WP_003407292.1|1578216_1579041_-|class-I-SAM-dependent-methyltransferase
MTVYTPTSERQAPATTHRQMWALGDYAAIAEELLAPLGPILVSTSGIRRGDRVLDVAAGSGNVSIPAAMAGAHVTASDLTPELLRRAQARAAAAGLELGWREANAEALPFSAGEFDAVLSTIGVMFAPRHQRTADELARVCRRGGKISTLNWTPEGFYGKLLSTIRPYRPTLPAGAPHEVWWGSEDYVSGLFRDHVSDIRTRRGSLTVDRFGCPDECRDYFKNFYGPAINAYRSIADSPECVATLDAEITELCREYLCDGVMQWEYLIFTARKC
>NZ_CP012506.2|WP_003407295.1|1579209_1579692_+|MarR-family-transcriptional-regulator
MMPTEYPATAEESVDVITDALLTASRLLVAISAHSIAQVDENITIPQFRTLVILSNHGPINLATLATLLGVQPSATGRMVDRLVGAELIDRLPHPTSRRELLAALTKRGRDVVRQVTEHRRTEIARIVEQMAPAERHGLVRALTAFTEAGGEPDARYEIE
>NZ_CP012506.2|WP_003407297.1|1579763_1580588_-|class-I-SAM-dependent-methyltransferase
MTIDTPAREDQTLAATHRAMWALGDYALMAEEVMAPLGPILVAAAGIGPGVRVLDVAAGSGNISLPAAKTGATVISTDLTPELLQRSQARAAQQGLTLQYQEANAQALPFADDEFDTVISAIGVMFAPDHQAAADELVRVCRPGGTIGVISWTCEGFFGRMLATIRPYRPSVSADLPPSALWGREAYVTGLLGDGVTGLKTARGLLEVKRFDTAQAVHDYFKNNYGPTIEAYAHIGDNAVLAAELDRQLVELAAQYLSDGVMEWEYLLLTAEKR
>NZ_CP012506.2|WP_003900336.1|1580784_1581723_+|methionyl-tRNA-formyltransferase
MRLVFAGTPEPALASLRRLIESPSHDVIAVLTRPDAASGRRGKPQPSPVAREAAERGIPVLRPSRPNSAEFVAELSDLAPECCAVVAYGALLGGPLLAVPPHGWVNLHFSLLPAWRGAAPVQAAIAAGDTITGATTFQIEPSLDSGPIYGVVTEVIQPTDTAGDLLKRLAVSGAALLSTTLDGIADQRLTPRPQPADGVSVAPKITVANARVRWDLPAAVVERRIRAVTPNPGAWTLIGDLRVKLGPVHLDAAHRPSKPLPPGGIHVERTSVWIGTGSEPVRLGQIQPPGKKLMNAADWARGARLDLAARAT

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Crispr_ID: NZ_CP012506_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012506_7

2070992-2071246

Orphan

Consensus_repeat	Method
GCCNCCGTCGCCGCCNNTGCC	CRT

5 spacers

The CRISPR arrays of NZ_CP012506_7

>merge|NZ_CP012506|7|2070992-2071246|CRT
GCCTCCGTTCCCGCCACTGCCACCGCCGGGGGCGAAGACGCCGGTACCGGCGGACCCGGCGCCTCCGGCGCCACCGTTGCCGATCAGCCCGACGGCGTTGCCGCCGTCGCCGCCGTGGCCTCGGAGAAAGCCGTCGGTTTGCACGCTGTTGCCGCCGTCGCCGCCGTTGCCGATCAGCGTCCCGCCGGTGCCGCCGTCGCCGCCGTTGCCATCGAAGAAGCTGAACCCGCCGTTACCGCCGTCGCCGAACATCCC

>NZ_CP012506|7|3|2070992-2071246|CRT
GCCTCCGTTCCCGCCACTGCC	ACCGCCGGGGGCGAAGACGCCGGTACCGGCGGACCCGGC
GCCTCCGGCGCCACCGTTGCC	GATCAGCCCGACGGCGTT
GCCGCCGTCGCCGCCGTGGCC	TCGGAGAAAGCCGTCGGTTTGCACGCTGTT
GCCGCCGTCGCCGCCGTTGCC	GATCAGCGTCCCGCCGGT
GCCGCCGTCGCCGCCGTTGCC	ATCGAAGAAGCTGAACCCGCCGTT
ACCGCCGTCGCCGAACATCCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012506.2\|WP_003409284.1\|2076433_2077885_-\|NADP-dependent-phosphogluconate-dehydrogenase	unknown	unknown	gnl\|CDD\|236453
NZ_CP012506.2\|WP_003900418.1\|2058579_2061405_+\|aminomethyl-transferring-glycine-dehydrogenase	unknown	unknown	gnl\|CDD\|235432
NZ_CP012506.2\|WP_003902187.1\|2079573_2079996_+\|PaaI-family-thioesterase	unknown	unknown	gnl\|CDD\|239527
NZ_CP012506.2\|WP_003409308.1\|2080343_2080658_+\|urease-subunit-beta	unknown	unknown	gnl\|CDD\|106171
NZ_CP012506.2\|WP_003409254.1\|2061631_2062492_-\|haloalkane-dehalogenase	unknown	unknown	gnl\|CDD\|179554
NZ_CP012506.2\|WP_003409298.1\|2077914_2078865_-\|M56-family-metallopeptidase	unknown	unknown	gnl\|CDD\|320685
NZ_CP012506.2\|WP_003409305.1\|2080044_2080347_+\|urease-subunit-gamma	unknown	unknown	gnl\|CDD\|376347
NZ_CP012506.2\|WP_003409244.1\|2057543_2058221_+\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133380
NZ_CP012506.2\|WP_003905667.1\|2067458_2069684_-\|malate-synthase-G	unknown	unknown	gnl\|CDD\|235097
NZ_CP012506.2\|WP_003899049.1\|2080657_2082391_+\|urease-subunit-alpha	unknown	unknown	gnl\|CDD\|237304
NZ_CP012506.2\|WP_003900419.1\|2072383_2073421_-\|HlyC/CorC-family-transporter	unknown	unknown	gnl\|CDD\|224173
NZ_CP012506.2\|WP_003899046.1\|2073420_2074788_-\|HlyC/CorC-family-transporter	unknown	unknown	gnl\|CDD\|224173
NZ_CP012506.2\|WP_003409255.1\|2062532_2063399_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_CP012506.2\|WP_003901265.1\|2065305_2067339_-\|solute-binding-protein	unknown	unknown	gnl\|CDD\|238733
NZ_CP012506.2\|WP_003900420.1\|2074961_2076398_-\|GuaB1-family-IMP-dehydrogenase-related-protein	unknown	unknown	gnl\|CDD\|181127
NZ_CP012506.2\|WP_003409276.1\|2070351_2070615_-\|antitoxin	unknown	unknown	unknown
NZ_CP012506.2\|WP_003409273.1\|2069959_2070355_-\|type-II-toxin-antitoxin-system-VapC-family-toxin	unknown	unknown	gnl\|CDD\|224761
NZ_CP012506.2\|WP_003905666.1\|2063403_2065290_-\|CocE/NonD-family-hydrolase	unknown	unknown	gnl\|CDD\|273375
NZ_CP012506.2\|WP_003409242.1\|2056645_2057140_+\|bifunctional-nuclease-family-protein	unknown	unknown	gnl\|CDD\|376830
NZ_CP012506.2\|WP_003409301.1\|2078879_2079296_-\|transcriptional-repressor-BlaI	unknown	unknown	gnl\|CDD\|226207

Protein	Function_ID	Function_description	E-value
NZ_CP012506.2\|WP_003409284.1\|2076433_2077885_-\|NADP-dependent-phosphogluconate-dehydrogenase	gnl\|CDD\|236453	PRK09287, PRK09287, NADP-dependent phosphogluconate dehydrogenase.	0
NZ_CP012506.2\|WP_003900418.1\|2058579_2061405_+\|aminomethyl-transferring-glycine-dehydrogenase	gnl\|CDD\|235432	PRK05367, PRK05367, aminomethyl-transferring glycine dehydrogenase.	0
NZ_CP012506.2\|WP_003902187.1\|2079573_2079996_+\|PaaI-family-thioesterase	gnl\|CDD\|239527	cd03443, PaaI_thioesterase, PaaI_thioesterase is a tetrameric acyl-CoA thioesterase with a hot dog fold and one of several proteins responsible for phenylacetic acid (PA) degradation in bacteria. Although orthologs of PaaI exist in archaea and eukaryotes, their function has not been determined. Sequence similarity between PaaI, E. coli medium chain acyl-CoA thioesterase II, and human thioesterase III suggests they all belong to the same thioesterase superfamily. The conserved fold present in these thioesterases is referred to as an asymmetric hot dog fold, similar to those of 4-hydroxybenzoyl-CoA thioesterase (4HBT) and the beta-hydroxydecanoyl-ACP dehydratases (FabA/FabZ).	5.29844e-31
NZ_CP012506.2\|WP_003409308.1\|2080343_2080658_+\|urease-subunit-beta	gnl\|CDD\|106171	PRK13202, ureB, urease subunit beta; Reviewed.	3.42156e-64
NZ_CP012506.2\|WP_003409254.1\|2061631_2062492_-\|haloalkane-dehalogenase	gnl\|CDD\|179554	PRK03204, PRK03204, haloalkane dehalogenase; Provisional.	0
NZ_CP012506.2\|WP_003899049.1\|2080657_2082391_+\|urease-subunit-alpha	gnl\|CDD\|237304	PRK13206, ureC, urease subunit alpha; Reviewed.	0
NZ_CP012506.2\|WP_003409305.1\|2080044_2080347_+\|urease-subunit-gamma	gnl\|CDD\|376347	pfam00547, Urease_gamma, Urease, gamma subunit. Urease is a nickel-binding enzyme that catalyzes the hydrolysis of urea to carbon dioxide and ammonia.	1.78898e-65
NZ_CP012506.2\|WP_003409244.1\|2057543_2058221_+\|MerR-family-transcriptional-regulator	gnl\|CDD\|133380	cd01105, HTH_GlnR-like, Helix-Turn-Helix DNA binding domain of GlnR-like transcription regulators. Helix-turn-helix (HTH) transcription regulator GlnR and related proteins, N-terminal domain. The GlnR and TnrA (also known as ScgR) proteins have been shown to regulate expression of glutamine synthetase as well as several genes involved in nitrogen metabolism. These proteins share the N-terminal DNA binding domain with other transcription regulators of the MerR superfamily that promote transcription by reconfiguring the spacer between the -35 and -10 promoter elements. A typical MerR regulator is comprised of two distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their conserved N-terminal domains contain predicted winged HTH motifs that mediate DNA binding, while the dissimilar C-terminal domains bind specific coactivator molecules.	6.61772e-22
NZ_CP012506.2\|WP_003905667.1\|2067458_2069684_-\|malate-synthase-G	gnl\|CDD\|235097	PRK02999, PRK02999, malate synthase G; Provisional.	0
NZ_CP012506.2\|WP_003900419.1\|2072383_2073421_-\|HlyC/CorC-family-transporter	gnl\|CDD\|224173	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only].	1.8319e-96
NZ_CP012506.2\|WP_003409298.1\|2077914_2078865_-\|M56-family-metallopeptidase	gnl\|CDD\|320685	cd07326, M56_BlaR1_MecR1_like, Peptidase M56-like including those in BlaR1 and MecR1, integral membrane metallopeptidase. This family contains peptidase M56, which includes zinc metalloprotease domain in MecR1 as well as BlaR1. MecR1 is a transmembrane beta-lactam sensor/signal transducer protein that regulates the expression of an altered penicillin-binding protein PBP2a, which resists inactivation by beta-lactam antibiotics, in methicillin-resistant Staphylococcus aureus (MRSA). BlaR1 regulates the inducible expression of a class A beta-lactamase that hydrolytically destroys certain ?-lactam antibiotics in MRSA. Both, MecR1 and BlaR1, are transmembrane proteins that consist of four transmembrane helices, a cytoplasmic zinc protease domain, and the soluble C-terminal extracellular sensor domain, and are highly similar in sequence and function. The signal for protein expression is transmitted by site-specific proteolytic cleavage of both the transducer, which auto-activates, and the repressor, which is inactivated, unblocking gene transcription. All members contain the zinc metalloprotease motif (HEXXH). Homologs of this peptidase domain are also found in a number of other bacterial genome sequences, most of which are as yet uncharacterized.	3.1451e-26
NZ_CP012506.2\|WP_003409255.1\|2062532_2063399_+\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	6.65147e-19
NZ_CP012506.2\|WP_003901265.1\|2065305_2067339_-\|solute-binding-protein	gnl\|CDD\|238733	cd01456, vWA_ywmD_type, VWA ywmD type:Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A domains. Not much is known about the function of the members of this subgroup. All members of this subgroup however have a conserved MIDAS motif. .	3.79869e-39
NZ_CP012506.2\|WP_003900420.1\|2074961_2076398_-\|GuaB1-family-IMP-dehydrogenase-related-protein	gnl\|CDD\|181127	PRK07807, PRK07807, GuaB1 family IMP dehydrogenase-related protein.	0
NZ_CP012506.2\|WP_003899046.1\|2073420_2074788_-\|HlyC/CorC-family-transporter	gnl\|CDD\|224173	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only].	8.70643e-128
NZ_CP012506.2\|WP_003409273.1\|2069959_2070355_-\|type-II-toxin-antitoxin-system-VapC-family-toxin	gnl\|CDD\|224761	COG1848, COG1848, Predicted nucleic acid-binding protein, contains PIN domain [General function prediction only].	1.16634e-21
NZ_CP012506.2\|WP_003905666.1\|2063403_2065290_-\|CocE/NonD-family-hydrolase	gnl\|CDD\|273375	TIGR00976, Hypothetical_protein_Rv1835c/MT1883/Mb1866c., putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases. [Unknown function, Enzymes of unknown specificity].	0
NZ_CP012506.2\|WP_003409242.1\|2056645_2057140_+\|bifunctional-nuclease-family-protein	gnl\|CDD\|376830	pfam02577, DNase-RNase, Bifunctional nuclease. This family is a bifunctional nuclease, with both DNase and RNase activity. It forms a wedge-shaped dimer, with each monomer being triangular in shape. A large groove at the thick end of the wedge contains a possible active site.	1.28808e-61
NZ_CP012506.2\|WP_003409301.1\|2078879_2079296_-\|transcriptional-repressor-BlaI	gnl\|CDD\|226207	COG3682, COG3682, Predicted transcriptional regulator [Transcription].	1.25443e-40

>NZ_CP012506.2|WP_003409276.1|2070351_2070615_-|antitoxin
MSKRLQVLLDPDEWEELREIARRHRTTVSEWVRRTLREAREREPRGDLDMKLRSVRAAARHEFPTADVEQMLEEIERGRGAEREGSR
>NZ_CP012506.2|WP_003409273.1|2069959_2070355_-|type-II-toxin-antitoxin-system-VapC-family-toxin
MILVDSNIPMYLVGASHPHKLDAQRLLESALSGGERLVTDAEVLQEICHRYVAIKRREAIQPAFDAIIGVVDEVLPIERTDVEHARDALLRYQTLSARDALHIAVMAHHDITRLMSFDRGFDSYPGIKRLA
>NZ_CP012506.2|WP_003905667.1|2067458_2069684_-|malate-synthase-G
MTDRVSVGNLRIARVLYDFVNNEALPGTDIDPDSFWAGVDKVVADLTPQNQALLNARDELQAQIDKWHRRRVIEPIDMDAYRQFLTEIGYLLPEPDDFTITTSSVDAEITTTAGPQLVVPVLNARFALNAANARWGSLYDALYGTDVIPETDGAEKGPTYNKVRGDKVIAYARKFLDDSVPLSSGSFGDATGFTVQDGQLVVALPDKSTGLANPGQFAGYTGAAESPTSVLLINHGLHIEILIDPESQVGTTDRAGVKDVILESAITTIMDFEDSVAAVDAADKVLGYRNWLGLNKGDLAAAVDKDGTAFLRVLNRDRNYTAPGGGQFTLPGRSLMFVRNVGHLMTNDAIVDTDGSEVFEGIMDALFTGLIAIHGLKASDVNGPLINSRTGSIYIVKPKMHGPAEVAFTCELFSRVEDVLGLPQNTMKIGIMDEERRTTVNLKACIKAAADRVVFINTGFLDRTGDEIHTSMEAGPMVRKGTMKSQPWILAYEDHNVDAGLAAGFSGRAQVGKGMWTMTELMADMVETKIAQPRAGASTAWVPSPTAATLHALHYHQVDVAAVQQGLAGKRRATIEQLLTIPLAKELAWAPDEIREEVDNNCQSILGYVVRWVDQGVGCSKVPDIHDVALMEDRATLRISSQLLANWLRHGVITSADVRASLERMAPLVDRQNAGDVAYRPMAPNFDDSIAFLAAQELILSGAQQPNGYTEPILHRRRREFKARAAEKPAPSDRAGDDAAR
>NZ_CP012506.2|WP_003901265.1|2065305_2067339_-|solute-binding-protein
MGRHSKPDPEDSVDDLSDGHAAEQQHWEDISGSYDYPGVDQPDDGPLSSEGHYSAVGGYSASGSEDYPDIPPRPDWEPTGAEPIAAAPPPLFRFGHRGPGDWQAGHRSADGRRGVSIGVIVALVAVVVMVAGVILWRFFGDALSNRSHTAAARCVGGKDTVAVIADPSIADQVKESADSYNASAGPVGDRCVAVAVTSAGSDAVINGFIGKWPTELGGQPGLWIPSSSISAARLTGAAGSQAISDSRSLVISPVLLAVRPELQQALANQNWAALPGLQTNPNSLSGLDLPAWGSLRLAMPSSGNGDAAYLAGEAVAAASAPAGAPATAGIGAVRTLMGARPKLADDSLTAAMDTLLKPGDVATAPVHAVVTTEQQLFQRGQSLSDAENTLGSWLPPGPAAVADYPTVLLSGAWLSQEQTSAASAFARYLHKPEQLAKLARAGFRVSDVKPPSSPVTSFPALPSTLSVGDDSMRATLADTMVTASAGVAATIMLDQSMPNDEGGNSRLSNVVAALENRIKAMPPSSVVGLWTFDGREGRTEVPAGPLADPVNGQPRPAALTAALGKQYSSGGGAVSFTTLRLIYQEMLANYRVGQANSVLVITAGPHTDQTLDGPGLQDFIRKSADPAKPIAVNIIDFGADPDRATWEAVAQLSGGSYQNLETSASPDLATAVNIFLS
>NZ_CP012506.2|WP_003905666.1|2063403_2065290_-|CocE/NonD-family-hydrolase
MTRRGGSDAAWYSAPDQRSAYPRYRGMRYSSCYVTMRDGVRIAIDLYLPAGLTSAARLPAILHQTRYYRSLQLRWPLRMLLGGKPLQHIAADKRRRRRFVASGYAWVDVDVRGSGASFGARVCEWSSDEIRDGAEIVDWIVRQPWCNGTVAALGNSYDGTSAELLLVNQHPAVRVIAPRFSLFDVYTDIAFPGGIHAAWFTDTWGRYNEALDRNALHEVVGWWAKLPVTGMQPVQEDRDRSLRDGAIAAHRGNYDVHQIAGSLTFRDDVSASDPYRGQPDARLEPIGTPIESGSINLISPHNYWRDVQASGAAIYSYSGWFDGGYAHAAIKRFLTVSTPGSHLILGPWNHTGGWRVDPLRGLSRPDFDHDGELLRFIDHHVKGADTGIGSEPPVHYFTMVENRWKSADTWPPPATTQSYYLSADRQLRPDAPDCDSGADEYVVDQTAGTGERSRWRSQVGIGGHVCYPDRKAQDAKLLTYTSAPLDHPLEVTGHVVVTLFITSTSSDGTFFVYLEDVDPRGRVAYITEGQLRAIHRRLSDGPPPYRQVVPYRTFASGDAWPLVPGEIARLTFDLLPTSYLFQPGHRIRIAIAGADASHFAILPGCAPTVRVYRSRMHASRIDLPVIQP
>NZ_CP012506.2|WP_003409255.1|2062532_2063399_+|alpha/beta-hydrolase
MTSPSVREWRDGGRWLPTAVGKVFVRSGPGDTPTMLLLHGYPSSSFDFRAVIPHLTGQAWVTMDFLGFGLSDKPRPHRYSLLEQAHLVETVVAHTVTGAVVVLAHDMGTSVTTELLARDLDGRLPFDLRRAVLSNGSVILERASLRPIQKVLRSPLGPVAARLVSRGGFTRGFGRIFSPAHPLSAQEAQAQWELLCYNDGNRIPHLLISYLDERIRHAQRWHGAVRDWPKPLGFVWGLDDPVATTNVLNGLRELRPSAAVVELPGLGHYPQVEAPKAYAEAALSLLVD
>NZ_CP012506.2|WP_003409254.1|2061631_2062492_-|haloalkane-dehalogenase
MSIDFTPDPQLYPFESRWFDSSRGRIHYVDEGTGPPILLCHGNPTWSFLYRDIIVALRDRFRCVAPDYLGFGLSERPSGFGYQIDEHARVIGEFVDHLGLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPADTLAMKAFSRVMSSPPVQYAILRRNFFVERLIPAGTEHRPSSAVMAHYRAVQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKPTLLIWGMKDVAFRPKTIIPRLSATFPDHVLVELPNAKHFIQEDAPDRIAAAIIERFG
>NZ_CP012506.2|WP_003900418.1|2058579_2061405_+|aminomethyl-transferring-glycine-dehydrogenase
MSDHSTFADRHIGLDSQAVATMLAVIGVDSLDDLAVKAVPAGILDTLTDTGAAPGLDSLPPAASEAEALAELRALADANTVAVSMIGQGYYDTHTPPVLLRNIIENPAWYTAYTPYQPEISQGRLEALLNFQTLVTDLTGLEIANASMLDEGTAAAEAMTLMHRAARGPVKRVVVDADVFTQTAAVLATRAKPLGIEIVTADLRAGLPDGEFFGVIAQLPGASGRITDWSALVQQAHDRGALVAVGADLLALTLIAPPGEIGADVAFGTTQRFGVPMGFGGPHAGYLAVHAKHARQLPGRLVGVSVDSDGTPAYRLALQTREQHIRRDKATSNICTAQVLLAVLAAMYASYHGAGGLTAIARRVHAHAEAIAGALGDALVHDKYFDTVLARVPGRADEVLARAKANGINLWRVDADHVSVACDEATTDTHVAVVLDAFGVAAAAPAHTDIATRTSEFLTHPAFTQYRTETSMMRYLRALADKDIALDRSMIPLGSCTMKLNAAAEMESITWPEFGRQHPFAPASDTAGLRQLVADLQSWLVLITGYDAVSLQPNAGSQGEYAGLLAIHEYHASRGEPHRDICLIPSSAHGTNAASAALAGMRVVVVDCHDNGDVDLDDLRAKVGEHAERLSALMITYPSTHGVYEHDIAEICAAVHDAGGQVYVDGANLNALVGLARPGKFGGDVSHLNLHKTFCIPHGGGGPGVGPVAVRAHLAPFLPGHPFAPELPKGYPVSSAPYGSASILPITWAYIRMMGAEGLRAASLTAITSANYIARRLDEYYPVLYTGENGMVAHECILDLRGITKLTGITVDDVAKRLADYGFHAPTMSFPVAGTLMVEPTESESLAEVDAFCEAMIGIRAEIDKVGAGEWPVDDNPLRGAPHTAQCLLASDWDHPYTREQAAYPLGTAFRPKVWPAVRRIDGAYGDRNLVCSCPPVEAFA
>NZ_CP012506.2|WP_003409244.1|2057543_2058221_+|MerR-family-transcriptional-regulator
MTQLVTRARSARGSTLGEQPRQDQLDFADHTGTAGDGNDGAAAASGPVQPGLFPDDSVPDELVGYRGPSACQIAGITYRQLDYWARTSLVVPSIRSAAGSGSQRLYSFKDILVLKIVKRLLDTGISLHNIRVAVDHLRQRGVQDLANITLFSDGTTVYECTSAEEVVDLLQGGQGVFGIAVSGAMRELTGVIADFHGERADGGESIAAPEDELASRRKHRDRKIG
>NZ_CP012506.2|WP_003409242.1|2056645_2057140_+|bifunctional-nuclease-family-protein
MGEVRVVGIRVEQPQNQPVLLLREANGDRYLPIWIGQSEAAAIALEQQGVEPPRPLTHDLIRDLIAALGHSLKEVRIVDLQEGTFYADLIFDRNIKVSARPSDSVAIALRVGVPIYVEEAVLAQAGLLIPDESDEEATTAVREDEVEKFKEFLDSVSPDDFKAT
>NZ_CP012506.2|WP_003900419.1|2072383_2073421_-|HlyC/CorC-family-transporter
MDVLSAVLLALLLIGANAFFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAMLTGAQLGVTVSSILLGRVGEPAVVKLLQLSFGLSGVPPALLHTLSLAIVVALHVLLGEMVPKNIALAGPERTAMLLVPPYLVYVRLARPFIAFYNNCANAILRLVGVQPKDELDIAVSTAELSEMIAESLSEGLLDHEEHTRLTRALRIRTRLVADVAVPLVNIRAVQVSAVGSGPTIGGVEQALAQTGYSRFPVVDRGGRFIGYLHIKDVLTLGDNPQTVIDLAVVRPLPRVPQSLPLADALSRMRRINSHLALVTADNGSVVGMVALEDVVEDLVGTMRDGTHR
>NZ_CP012506.2|WP_003899046.1|2073420_2074788_-|HlyC/CorC-family-transporter
MNLTDTVATILAILALTAGTGVFVAAEFSLTALDRSTVEANARGGTSRDRFIQRAHHRLSFQLSGAQLGISITTLATGYLTEPLVAELPHPGLVAVGMSDRVADGLITFFALVIVTSLSMVFGELVPKYLAVARPLRTARSVVAGQVLFSLLLTPAIRLTNGAANWIVRRLGIEPAEELRSARTPQELVSLVRSSARSGALDDATAWLMRRSLQFGALTAEELMTPRSKIVALQTDDTIADLVAAAAASGFSRFPVVEGDLDATVGIVHVKQVFEVPPGDRAHTLLTTVAEPVAVVPSTLDGDAVMAQVRASALQTAMVVDEYGGTAGMVTLEDLIEEIVGDVRDEHDDATPDVVAAGNGWRVSGLLRIDEVASATGYRAPDGPYETIGGLVLRELGHIPVAGETVELTALDQDGLPDDSMRWLATVIQMDGRRIDLLELIKMGGHADPGSGRGR
>NZ_CP012506.2|WP_003900420.1|2074961_2076398_-|GuaB1-family-IMP-dehydrogenase-related-protein
MRFLDGHPPGYDLTYNDVFIVPNRSEVASRFDVDLSTADGSGTTIPVVVANMTAVAGRRMAETVARRGGIVILPQDLPIPAVKQTVAFVKSRDLVLDTPVTLAPDDSVSDAMALIHKRAHGVAVVILEGRPIGLVRESSCLGVDRFTRVRDIAVTDYVTAPAGTEPRKIFDLLEHAPVDVAVLTDADGTLAGVLSRTGAIRAGIYTPATDSAGRLRIGAAVGINGDVGAKARALAEAGVDVLVIDTAHGHQVKTLDAIKAVSALDLGLPLAAGNVVSAEGTRDLLKAGANVVKVGVGPGAMCTTRMMTGVGRPQFSAVLECASAARQLGGHIWADGGIRHPRDVALALAAGASNVMIGSWFAGTYESPGDLMRDRDDQPYKESYGMASKRAVVARTGADNPFDRARKALFEEGISTSRMGLDPDRGGVEDLIDHITSGVRSTCTYVGASNLAELHERAVVGVQSGAGFAEGHPLPAGW
>NZ_CP012506.2|WP_003409284.1|2076433_2077885_-|NADP-dependent-phosphogluconate-dehydrogenase
MSSSESPAGIAQIGVTGLAVMGSNIARNFARHGYTVAVHNRSVAKTDALLKEHSSDGKFVRSETIPEFLAALEKPRRVLIMVKAGEATDAVINELADAMEPGDIIIDGGNALYTDTMRREKAMRERGLHFVGAGISGGEEGALNGPSIMPGGPAESYQSLGPLLEEISAHVDGVPCCTHIGPDGSGHFVKMVHNGIEYSDMQLIGEAYQLMRDGLGLTAPAIADVFTEWNNGDLDSYLVEITAEVLRQTDAKTGKPLVDVIVDRAEQKGTGRWTVKSALDLGVPVTGIAEAVFARALSGSVGQRSAASGLASGKLGEQPADPATFTEDVRQALYASKIVAYAQGFNQIQAGSAEFGWDITPGDLATIWRGGCIIRAKFLNHIKEAFDASPNLASLIVAPYFRGAVESAIDSWRRVVSTAAQLGIPTPGFSSALSYYDALRTARLPAALTQAQRDFFGAHTYGRIDEPGKFHTLWSSDRTEVPV
>NZ_CP012506.2|WP_003409298.1|2077914_2078865_-|M56-family-metallopeptidase
MSALAFTILAVLLAGPTPALLARATWPLRAPRAAMVLWQAIALAAVLSSFSAGIAIASRLLMPGPDGRPTTSFVGAAGRLGWPLWAAYITVFALTVLVGARLAVAVVRVATATRRRRAHHRMVVDLVGVGHNGALAQPCARARDLRVLDVAQPLAYCLPGVRSRVVVSEGTLTALADAEVAAILTHERAHLRARHDLVLEAFTAVHAAFPRLVRSANALGAVQLLVELLADDAAVRAAGRTPLARALVACASGRAPSGALAVGGPSTVLRVRRLSGRGNSAVLSAAAYLAAAAVLVVPTVALAVPWLTQLQRLFIA
>NZ_CP012506.2|WP_003409301.1|2078879_2079296_-|transcriptional-repressor-BlaI
MAKLTRLGDLERAVMDHLWSRTEPQTVRQVHEALSARRDLAYTTVMTVLQRLAKKNLVLQIRDDRAHRYAPVHGRDELVAGLMVDALAQAEDSGSRQAALVHFVERVGADEADALRRALAELEAGHGNRPPAGAATET
>NZ_CP012506.2|WP_003902187.1|2079573_2079996_+|PaaI-family-thioesterase
MQPSPDSPAPLNVTVPFDSELGLQFTELGPDGARAQLDVRPKLLQLTGVVHGGVYCAMIESIASMAAFAWLNSHGEGGSVVGVNNNTDFVRSISSGMVYGTAEPLHRGRRQQLWLVTITDDTDRVVARGQVWLQNLEARP
>NZ_CP012506.2|WP_003409305.1|2080044_2080347_+|urease-subunit-gamma
MRLTPHEQERLLLSYAAELARRRRARGLRLNHPEAIAVIADHILEGARDGRTVAELMASGREVLGRDDVMEGVPEMLAEVQVEATFPDGTKLVTVHQPIA
>NZ_CP012506.2|WP_003409308.1|2080343_2080658_+|urease-subunit-beta
MIPGEIFYGSGDIEMNAAALSRLQMRIINAGDRPVQVGSHVHLPQANRALSFDRATAHGYRLDIPAATAVRFEPGIPQIVGLVPLGGRREVPGLTLNPPGRLDR
>NZ_CP012506.2|WP_003899049.1|2080657_2082391_+|urease-subunit-alpha
MARLSRERYAQLYGPTTGDRIRLADTNLLVEVTEDRCGGPGLAGDEAVFGGGKVLRESMGQGRASRADGAPDTVITGAVIIDYWGIIKADIGIRDGRIVGIGKAGNPDIMTGVHRDLVVGPSTEIISGNRRIVTAGTVDCHVHLICPQIIVEALAAGTTTIIGGGTGPAEGTKATTVTPGEWHLARMLESLDGWPVNFALLGKGNTVNPDALWEQLRGGASGFKLHEDWGSTPAAIDTCLAVADVAGVQVALHSDTLNETGFVEDTIGAIAGRSIHAYHTEGAGGGHAPDIITVAAQPNVLPSSTNPTRPHTVNTLDEHLDMLMVCHHLNPRIPEDLAFAESRIRPSTIAAEDVLHDMGAISMIGSDSQAMGRVGEVVLRTWQTAHVMKARRGALEGDPSGSQAADNNRVRRYIAKYTICPAIAHGMDHLIGSVEVGKLADLVLWEPAFFGVRPHVVLKGGAIAWAAMGDANASIPTPQPVLPRPMFGAAAATAAATSVHFVAPQSIDARLADRLAVNRGLAPVADVRAVGKTDLPLNDALPSIEVDPDTFTVRIDGQVWQPQPAAELPMTQRYFLF

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Crispr_ID: NZ_CP012506_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012506_8

2150825-2150950

Orphan

Consensus_repeat	Method
AACAGTAATAGGCGGAACATTGATCGGCCCCACCAACGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP012506_8

>merge|NZ_CP012506|8|2150825-2150950|CRISPRCasFinder
AACAGTAATAGGCGGAACATTGATCGGCCCCACCAACGCCCGCCCCACCAACGCCCCCGAACTACTCACACCCAAACCGATGGCGGGAACAGTAATAGGCGGAACATTGATCGGCCCCACCAACGC

>NZ_CP012506|8|4|2150825-2150950|CRISPRCasFinder
AACAGTAATAGGCGGAACATTGATCGGCCCCACCAACGC	CCGCCCCACCAACGCCCCCGAACTACTCACACCCAAACCGATGGCGGG
AACAGTAATAGGCGGAACATTGATCGGCCCCACCAACGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012506.2\|WP_003901288.1\|2156620_2157484_+\|acyltransferase-family-protein	unknown	unknown	gnl\|CDD\|153249
NZ_CP012506.2\|WP_003899076.1\|2138917_2139361_-\|transcriptional-repressor	unknown	unknown	gnl\|CDD\|223806
NZ_CP012506.2\|WP_003409584.1\|2143231_2145532_+\|isocitrate-lyase-family-protein	unknown	unknown	gnl\|CDD\|215482
NZ_CP012506.2\|WP_003900434.1\|2161547_2161928_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012506.2\|WP_003409577.1\|2142689_2143097_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012506.2\|WP_003900428.1\|2135207_2135678_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012506.2\|WP_003409568.1\|2140150_2140756_-\|YbhB/YbcL-family-Raf-kinase-inhibitor-like-protein	unknown	unknown	gnl\|CDD\|224793
NZ_CP012506.2\|WP_003409666.1\|2157521_2158793_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|273654
NZ_CP012506.2\|WP_003409574.1\|2141959_2142712_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293840
NZ_CP012506.2\|WP_003902177.1\|2162084_2163947_+\|AMP-binding-protein	unknown	unknown	gnl\|CDD\|171527
NZ_CP012506.2\|WP_003409570.1\|2140855_2141860_-\|zinc-binding-dehydrogenase	unknown	unknown	gnl\|CDD\|176236
NZ_CP012506.2\|WP_003409684.1\|2163954_2164434_-\|MPT63-family-protein	unknown	unknown	gnl\|CDD\|370335
NZ_CP012506.2\|WP_003902179.1\|2152646_2155610_-\|PPE-family-protein	unknown	unknown	gnl\|CDD\|366325
NZ_CP012506.2\|WP_003899082.1\|2156058_2156523_-\|SRPBCC-family-protein	unknown	unknown	gnl\|CDD\|176863
NZ_CP012506.2\|WP_003409566.1\|2139474_2140068_-\|YbhB/YbcL-family-Raf-kinase-inhibitor-like-protein	unknown	unknown	gnl\|CDD\|224793
NZ_CP012506.2\|WP_014585239.1\|2136017_2136482_-\|DUF4262-domain-containing-protein	unknown	unknown	gnl\|CDD\|379457
NZ_CP012506.2\|WP_003905688.1\|2164670_2165444_+\|YqjF-family-protein	unknown	unknown	gnl\|CDD\|225897
NZ_CP012506.2\|WP_003910876.1\|2136657_2138880_-\|catalase/peroxidase-HPI	unknown	unknown	gnl\|CDD\|237891
NZ_CP012506.2\|WP_003409667.1\|2159064_2160180_+\|serine-hydrolase	unknown	unknown	gnl\|CDD\|224594
NZ_CP012506.2\|WP_003900433.1\|2160170_2161511_+\|serine-hydrolase	unknown	unknown	gnl\|CDD\|365903

Protein	Function_ID	Function_description	E-value
NZ_CP012506.2\|WP_003901288.1\|2156620_2157484_+\|acyltransferase-family-protein	gnl\|CDD\|153249	cd07987, LPLAT_MGAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: MGAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this suubgroup are such LPLATs as 2-acylglycerol O-acyltransferase (MGAT), and similar proteins.	4.71059e-64
NZ_CP012506.2\|WP_003899076.1\|2138917_2139361_-\|transcriptional-repressor	gnl\|CDD\|223806	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism].	4.92282e-41
NZ_CP012506.2\|WP_003409584.1\|2143231_2145532_+\|isocitrate-lyase-family-protein	gnl\|CDD\|215482	PLN02892, PLN02892, isocitrate lyase.	2.96208e-144
NZ_CP012506.2\|WP_003409684.1\|2163954_2164434_-\|MPT63-family-protein	gnl\|CDD\|370335	pfam09167, DUF1942, Domain of unknown function (DUF1942). Members of this family of bacterial proteins assume a beta-sandwich structure consisting of two antiparallel beta-sheets similar to an immunoglobulin-like fold, with an additional small, antiparallel beta-sheet. The longer-stranded beta-sheet is made up of four antiparallel beta-strands. The shorter-stranded beta-sheet consists of five beta-strands, four of these beta-strands form an antiparallel beta-sheet. The exact function of this family of proteins is unknown, though a putative role includes involvement in host-bacterial interactions involved in endocytosis or phagocytosis, possibly during bacterial internalisation.	3.87872e-58
NZ_CP012506.2\|WP_003902179.1\|2152646_2155610_-\|PPE-family-protein	gnl\|CDD\|366325	pfam00823, PPE, PPE family. This family named after a PPE motif near to the amino terminus of the domain. The PPE family of proteins all contain an amino-terminal region of about 180 amino acids. The carboxyl terminus of this family are variable, and on the basis of this region fall into at least three groups. The MPTR subgroup has tandem copies of a motif NXGXGNXG. The second subgroup contains a conserved motif at about position 350. The third group are only related in the amino terminal region. The function of these proteins is uncertain but it has been suggested that they may be related to antigenic variation of Mycobacterium tuberculosis.	3.99692e-74
NZ_CP012506.2\|WP_003409568.1\|2140150_2140756_-\|YbhB/YbcL-family-Raf-kinase-inhibitor-like-protein	gnl\|CDD\|224793	COG1881, COG1881, Phospholipid-binding protein [General function prediction only].	1.29998e-51
NZ_CP012506.2\|WP_003409666.1\|2157521_2158793_-\|hypothetical-protein	gnl\|CDD\|273654	TIGR01490, Uncharacterized_protein_Rv3661/MT3761, HAD-superfamily subfamily IB hydrolase, TIGR01490. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled here are all bacterial. The IB subfamily includes the enzyme phosphoserine phosphatase (TIGR00338). Due to this relationship, several of these sequences have been annotated as "phosphoserine phosphatase related proteins," or "Phosphoserine phosphatase-family enzymes." There is presently no evidence that any of the enzymes in this model possess PSPase activity. OMNI\|NTL01ML1250 is annotated as a "possible transferase," however this is due to the C-terminal domain found on this sequence which is homologous to a group of glycerol-phosphate acyltransferases (between trusted and noise to TIGR00530). A subset of these sequences including OMNI\|CC1962, the Caulobacter crescentus CicA protein cluster together and may represent a separate equivalog. [Unknown function, Enzymes of unknown specificity].	4.7592e-11
NZ_CP012506.2\|WP_003409574.1\|2141959_2142712_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293840	cd16282, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain. Members of the MBL-fold metallohydrolase superfamily are mainly hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) for which this fold was named perform only a small fraction of the activities included in this superfamily.Activities carried out by superfamily members include class B beta-lactamases, hydroxyacylglutathione hydrolases, AHL (acyl homoserine lactone) lactonases, persulfide dioxygenases, flavodiiron proteins, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J and ribonuclease Z, cyclic nucleotide phosphodiesterases, insecticide hydrolases, and proteins required for natural transformation competence. Classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, however the diversity of biological roles is reflected in variations in the active site metallo-chemistry.	1.95555e-42
NZ_CP012506.2\|WP_003902177.1\|2162084_2163947_+\|AMP-binding-protein	gnl\|CDD\|171527	PRK12476, PRK12476, putative fatty-acid--CoA ligase; Provisional.	0
NZ_CP012506.2\|WP_003409570.1\|2140855_2141860_-\|zinc-binding-dehydrogenase	gnl\|CDD\|176236	cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	1.67964e-153
NZ_CP012506.2\|WP_003905688.1\|2164670_2165444_+\|YqjF-family-protein	gnl\|CDD\|225897	COG3361, COG3361, Uncharacterized conserved protein [Function unknown].	2.68592e-126
NZ_CP012506.2\|WP_003409566.1\|2139474_2140068_-\|YbhB/YbcL-family-Raf-kinase-inhibitor-like-protein	gnl\|CDD\|224793	COG1881, COG1881, Phospholipid-binding protein [General function prediction only].	4.33831e-50
NZ_CP012506.2\|WP_003899082.1\|2156058_2156523_-\|SRPBCC-family-protein	gnl\|CDD\|176863	cd07821, PYR_PYL_RCAR_like, Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins. The PYR/PYL/RCAR-like family belongs to the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain superfamily of proteins that bind hydrophobic ligands. SRPBCC domains have a deep hydrophobic ligand-binding pocket. PYR/PYL/RCAR plant proteins are receptors involved in signal transduction. They bind abscisic acid (ABA) and mediate its signaling. ABA is a vital plant hormone, which regulates plant growth, development, and response to environmental stresses. Upon binding ABA, these plant proteins interact with a type 2C protein phosphatase (PP2C), such as ABI1 and ABI2, and inhibit their activity. When ABA is bound, a loop (designated the gate/CL2 loop) closes over the ligand binding pocket, resulting in the weakening of the inactive PYL dimer and facilitating type 2C protein phosphatase binding. In the ABA:PYL1:ABI1 complex, the gate blocks substrate access to the phosphatase active site. A conserved Trp from PP2C inserts into PYL to lock the receptor in a closed formation. This group also contains Methylobacterium extorquens AM1 MxaD. The mxaD gene is located within the mxaFJGIR(S)ACKLDEHB cluster which encodes proteins involved in methanol oxidation. MxaD may participate in the periplasmic electron transport chain for oxidation of methanol. Mutants lacking MxaD exhibit a reduced growth on methanol, and a lower rate of respiration with methanol.	1.38133e-21
NZ_CP012506.2\|WP_014585239.1\|2136017_2136482_-\|DUF4262-domain-containing-protein	gnl\|CDD\|379457	pfam14081, DUF4262, Domain of unknown function (DUF4262). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and viruses. Proteins in this family are typically between 147 and 227 amino acids in length. Some members may be incorrectly annotated as the KatG protein.	7.86857e-31
NZ_CP012506.2\|WP_003910876.1\|2136657_2138880_-\|catalase/peroxidase-HPI	gnl\|CDD\|237891	PRK15061, PRK15061, catalase/peroxidase.	0
NZ_CP012506.2\|WP_003409667.1\|2159064_2160180_+\|serine-hydrolase	gnl\|CDD\|224594	COG1680, AmpC, Beta-lactamase class C and other penicillin binding proteins [Defense mechanisms].	8.61879e-60
NZ_CP012506.2\|WP_003900433.1\|2160170_2161511_+\|serine-hydrolase	gnl\|CDD\|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	7.07573e-54

>NZ_CP012506.2|WP_003409584.1|2143231_2145532_+|isocitrate-lyase-family-protein
MAIAETDTEVHTPFEQDFEKDVAATQRYFDSSRFAGIIRLYTARQVVEQRGTIPVDHIVAREAAGAFYERLRELFAARKSITTFGPYSPGQAVSMKRMGIEAIYLGGWATSAKGSSTEDPGPDLASYPLSQVPDDAAVLVRALLTADRNQHYLRLQMSERQRAATPAYDFRPFIIADADTGHGGDPHVRNLIRRFVEVGVPGYHIEDQRPGTKKCGHQGGKVLVPSDEQIKRLNAARFQLDIMRVPGIIVARTDAEAANLIDSRADERDQPFLLGATKLDVPSYKSCFLAMVRRFYELGVKELNGHLLYALGDSEYAAAGGWLERQGIFGLVSDAVNAWREDGQQSIDGIFDQVESRFVAAWEDDAGLMTYGEAVADVLEFGQSEGEPIGMAPEEWRAFAARASLHAARAKAKELGADPPWDCELAKTPEGYYQIRGGIPYAIAKSLAAAPFADILWMETKTADLADARQFAEAIHAEFPDQMLAYNLSPSFNWDTTGMTDEEMRRFPEELGKMGFVFNFITYGGHQIDGVAAEEFATALRQDGMLALARLQRKMRLVESPYRTPQTLVGGPRSDAALAASSGRTATTKAMGKGSTQHQHLVQTEVPRKLLEEWLAMWSGHYQLKDKLRVQLRPQRAGSEVLELGIHGESDDKLANVIFQPIQDRRGRTILLVRDQNTFGAELRQKRLMTLIHLWLVHRFKAQAVHYVTPTDDNLYQTSKMKSHGIFTEVNQEVGEIIVAEVNHPRIAELLTPDRVALRKLITKEA
>NZ_CP012506.2|WP_003409577.1|2142689_2143097_-|hypothetical-protein
MVLSRTSTGRVILVPTQLRFDRWFLPLAVPLGLGPKNSELWVGAGSLHVKMGWAFAADIPLTSITKAEATNARVYAAGVHFGFGRWLVNGSRKGLVALTIDPPEQAKMWKKSMTVRELWVSVTDPDALVTACTAK
>NZ_CP012506.2|WP_003409574.1|2141959_2142712_+|MBL-fold-metallo-hydrolase
MHFDWERLTDSVHRCRLPFCDVTVGLVRGRTGILLVDTGTTLGEATAIAADVKQIAGCQVTHVVLTHKHFDHVLGSSVFDQAEVFCAPEVVEYLRSATDRLREDALSYGADTAEVDRAIAALKPPQHGIYDAAVDLGDRTVTITHPGSGHTTADLVVVAPATGHADGPTVVFTGDLVEESADPDIDADSDLAAWPATLDRVLAIGGPDASYVPGHGKVVDAQFVRRQRAWLRTRASRQPRETPATLPCKR
>NZ_CP012506.2|WP_003409570.1|2140855_2141860_-|zinc-binding-dehydrogenase
MRAVVITKHGDPSVLQVRQRPDPPPPGPGQLRVAVRAAGVNFADHLARVGLYPDAPKLPAVVGYEVAGTVEAVGDGVDPNRVGERVLAGTRFGGYCEIVNVAATDSVVLPDALSFEQGAAVPVNYATAWAALHGYGSLRAGERVLIHAAAGGVGIAAVQFAKAAKAEVHGTASPQKHQKLAEFGVDRAIDYRRDGWWQGLGPYDVVLDALGGTSLRRSYTLLRPGGRLVGYGISNMQHGEKRSMRRVAPHALSMLRGFNLMKQLEESKTVIGLNMLRLWDDRRTLEPWIAPLTKALNDGTILPIVHAIVPFAEAPEAHRILAARENVGKVVLVP
>NZ_CP012506.2|WP_003409568.1|2140150_2140756_-|YbhB/YbcL-family-Raf-kinase-inhibitor-like-protein
MTSTLHRTPLATAGLALVVALGGCGGGGGDSRETPPYVPKATTVDATTPAPAAEPLTIASPMFADGAPIPVQFSCKGANVAPPLTWSSPAGAAELALVVDDPDAVGGLYVHWIVTGIAPGSGSTADGQTPAGGHSVPNSGGRQGYFGPCPPAGTGTHHYRFTLYHLPVALQLPPGATGVQAAQAIAQAASGQARLVGTFEG
>NZ_CP012506.2|WP_003409566.1|2139474_2140068_-|YbhB/YbcL-family-Raf-kinase-inhibitor-like-protein
MAHAFHRFALAILGLALPVALVAYGGNGDSRKAAPLAPKAAALGRSMPETPTGDVLTISSPAFADGAPIPEQYTCKGANIAPPLTWSAPFGGALVVDDPDAPREPYVHWIVIGIAPGAGSTADGETPGGGISLPNSSGQPAYTGPCPPAGTGTHHYRFTLYHLPAVPPLAGLAGTQAARVIAQAATMQARLIGTYEG
>NZ_CP012506.2|WP_003899076.1|2138917_2139361_-|transcriptional-repressor
MSSIPDYAEQLRTADLRVTRPRVAVLEAVNAHPHADTETIFGAVRFALPDVSRQAVYDVLHALTAAGLVRKIQPSGSVARYESRVGDNHHHIVCRSCGVIADVDCAVGEAPCLTASDHNGFLLDEAEVIYWGLCPDCSISDTSRSHP
>NZ_CP012506.2|WP_003910876.1|2136657_2138880_-|catalase/peroxidase-HPI
MPEQHPPITETTTGAASNGCPVVGHMKYPVEGGGNQDWWPNRLNLKVLHQNPAVADPMGAAFDYAAEVATIDVDALTRDIEEVMTTSQPWWPADYGHYGPLFIRMAWHAAGTYRIHDGRGGAGGGMQRFAPLNSWPDNASLDKARRLLWPVKKKYGKKLSWADLIVFAGNCALESMGFKTFGFGFGRVDQWEPDEVYWGKEATWLGDERYSGKRDLENPLAAVQMGLIYVNPEGPNGNPDPMAAAVDIRETFRRMAMNDVETAALIVGGHTFGKTHGAGPADLVGPEPEAAPLEQMGLGWKSSYGTGTGKDAITTGIEVVWTNTPTKWDNSFLEILYGYEWELTKSPAGAWQYTAKDGAGAGTIPDPFGGPGRSPTMLATDLSLRVDPIYERITRRWLEHPEELADEFAKAWYKLIHRDMGPVARYLGPLVPKQTLLWQDPVPAVSHDLVGEAEIASLKSQILASGLTVSQLVSTAWAAASSFRGSDKRGGANGGRIRLQPQVGWEVNDPDGDLRKVIRTLEEIQESFNSAAPGNIKVSFADLVVLGGCAAIEKAAKAAGHNITVPFTPGRTDASQEQTDVESFAVLEPKADGFRNYLGKGNPLPAEYMLLDKANLLTLSAPEMTVLVGGLRVLGANYKRLPLGVFTEASESLTNDFFVNLLDMGITWEPSPADDGTYQGKDGSGKVKWTGSRVDLVFGSNSELRALVEVYGADDAQPKFVQDFVAAWDKVMNLDRFDVR
>NZ_CP012506.2|WP_014585239.1|2136017_2136482_-|DUF4262-domain-containing-protein
MCDHPEATAEEYLDEVYGIMLMHGWAVQHVECERRPFAYTVGLTRRGLPELVVTGLSPRRGQRLLNIAARRALVGDLLTPGMQTTLPAGPLVETVQVTHPDAHLYCAIAIFGDKVTALQLVWADRRGRWPWAADFDEGRGTQPVLGMRATRRSA
>NZ_CP012506.2|WP_003900428.1|2135207_2135678_-|hypothetical-protein
MRLKPAPSPAAAFAVAGLILAGWAGSVGLAGADPEPAPTPKTAIDSDGTYAVGIDIAPGTYSSAGPVGDGTCYWKRMGNPDGALIDNALSKKPQVVTIEPTDKAFKTHGCQPWQNTGSEGAAPAGVPGPEAGAQLQNQLGILNGLLGPTGGRVPQP
>NZ_CP012506.2|WP_003902179.1|2152646_2155610_-|PPE-family-protein
MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGRSSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISLVISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLRLPAGLAAGPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNNLGSGNFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNNIGNGLTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGHGNTGFLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGSINTGAFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFSLPAITLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPSLTIPATTTPANITVGAFNLPQLSIPSVTVPPITIPAGTALGAFNLPTLSIPSVTVPPITIPAGTTVGGFTLPTIHTPLISTPQISIGGFSTPGIATQANSGVINLPTFSLNGITITNLVVFIPNNITALQTNMPGVFPQIGGFANTPPAFINTGTITVGGGQINGVGFSIGAINVTPFTLPNVVIQPWSLGGISVDGFTLPEISTQEFTTPALTISPIGVGALSLPDITTQQFTTPELTIDPITLGGFTLPQLSIPAITTPAFTIDPIALGGFTLPQIMTPEITTPPFAIDPIGLSGFTLPQVNIPEITTPEFTIQPVGLAAFTTPALTIASIHLPSTTMGGFAIPAGPGYFNSSATPSSGFFNAGIGGNSGFGNSGSGLSGWFNTSPVGLLAGSGYQNYGGLISGFSNLGSGISGFANTGTLPFAVTSLVSGLANIGNNLSGLFFQSTTP
>NZ_CP012506.2|WP_003899082.1|2156058_2156523_-|SRPBCC-family-protein
MSGRKFSFEVTKTSSAPAATLFRLVTDGGNWATWAKPIVAQSSWARRGDPAPGGIGAIRKLGMWPVFVQEETVEYEQDRRHVYKLVGARTPVQDYFGEVVLTPNASGGTDLRWSGSFTEKVRGTGPVMRAALGGAVRFFAGQLVKAAEREAVRR
>NZ_CP012506.2|WP_003901288.1|2156620_2157484_+|acyltransferase-family-protein
MFPRWPQQAHNHEVSRADTVSVPRAPTQAEVAAVLRIMTPLRKVIKPKVYGIENVPTERALLVGNHNTLGLVDAPLLAAELWERGRIVRSLGDHAHFKIPGWRDALTRTGVVEGTREITSELMRRGELVMVFPGGAREVNKRKNERYKLVWKNRLGFARLAIQHGYPIVPFASVGAEHGIDIVLDNESPLLAPVQFLAEKLLGTKDGPALVRGVGLTPVPRPERQYYWFGEPIDTTEFMGQQADDNAARRVRARAAAAIEHGIELMLAERAADPNRSLVGRLLRSDA
>NZ_CP012506.2|WP_003409666.1|2157521_2158793_-|hypothetical-protein
MVRLIPSLLAMATVLGGVIGCSAHQPPTPASGCRQLDAFLKWHHGVREFLQSAIDANSRCTGTADGSARKVAIFDWDNTVVKNDIGYATNYYMLQHSLVLQPANQDWHAASRYLTDAAANALSVACGKVVPAGKPLPTGSNALCANEILSLLDGETTTGQPAFVGNNVRRLAGPYAWSNALSAGYTAEELAGFADQAKKQNLAADVGATQQVGTQQVDGYIRVYPQMKDLIGTLQAHGIDTWVVSASPEPIVKVWAGEVGLDDQHVVGVRSVADQSGKLTAHLVGCGGVRDGDDSVMTYLDGKRCWANQVIFGVTGPQAFNQLAADRRQVLAAGDSNSDATFVGDATVVSLVINRNQDDLMCRAYDGLFTRGGKWAINPMFIDPLPQHAPYVCGEAFINPDGSKQPVLRNDGTPIPDQVDSVF
>NZ_CP012506.2|WP_003409667.1|2159064_2160180_+|serine-hydrolase
MDSTVTASIRRMLGLLAATLLLGGCTGQHTTRTAASTTYTPHIKASSQDVLDGAINADEPGCSAAVGVEGKVIWSGVRGIADLASGAKITTDTVFDIASVSKQFTATAILLLVEAGKLTLDDPISQYVPELPDWAQTVTVEQLMHQTSGIPDYVALLAARGYQVSDRTIEAEARQALAAAPELQFKPGTRFDYSNSNYLLLGEIVHRASGQPLPEFLSAEIFQPLGLAMVVDPVGKVPNKAVSYEKGTGGNRSEYRVGNPAWEQIGDGGIQTTPSQLARWADNYRTGSVGGLKLLEAQLAGAVETEPGGGDRYGAGIVSRADGTLDHAGAWAGFVTAFHISSDRRTSVAISCNTDKPDPVAMADALGRLWM
>NZ_CP012506.2|WP_003900433.1|2160170_2161511_+|serine-hydrolase
MDVAGLPRLAAGTQAAIIHGMAQPPSLLTTDNGLPFGVQGACDSRFTGVIRAFAGLYPGRKFGGGALSVYIDGRQVVDVWTGWSDRQGKVPWTADTGAMVFSATKGLAATVIHRLVDRGLLSYDAPVAEYWPEFGANGKSEVTVSDVLRHRSGLAHLKGVDKDEVMDHLLMEQKLAAAPLDRQHGKLAYHAVTYGWLLSGLARAVTGKGMRELFREELARPLNTDGIHLGRPPADSPTKAAQTLLPQAKVPTPLLDFIAPKVAGLSFSGLLGAVYFPGILSLLQDDMPFLDGEVPAVNGVVTARALAKTYGALANDGVIDGTRLLSSQAVRGLTGKSELWPDLNLGLPFTYHQGYQSSPVPGLLEGYGHIGLGGTIGWADPETGSAFGYVHNRLLTLLLFDIGSFAGLAALLNSAVVAARRDDPLEVPHFGAPYSEPRHEQAASGA
>NZ_CP012506.2|WP_003900434.1|2161547_2161928_-|hypothetical-protein
MDPADVINPTSTRDAALARVLAYRQRVRARPLLIRATLAVVGGGLFVVSLPMIVLLPELGIPALLVAFRLLAVEAQWAVRAYAWTDWRFTQLREWFHRQVLVTRAAILVGLFLAAVALVWLLVYEF
>NZ_CP012506.2|WP_003902177.1|2162084_2163947_+|AMP-binding-protein
MNDGSRQELRVRSGLLQIEDCLDADGGIALPAGTTLISLIERNIKYVGDLVAYRYLDHARSAAGCALEVTWTQFGMRLAAIGAHVQRFAGPGDCVAILAPQGIDYVCGFYAAIKAGTVAVPLFAPELPGHAERLDTALRDSEPAVILTTAAAKNAVEGFLNNVPRLRKPTVLVIDQIPDREGELFVPVELDIDAVSHLQYTSGSTRPPVGVEITHRAVGTNLVQMILSIDLLNRNTHGVSWLPLYHDMGLSMIGFPAVYGGHSTLMSPTAFVRRPLRWIQALSEGSRTGRVVTAAPNFAYEWAAQRGLPAQGDDVDLSNVVLIIGSEPVSIDAVTTFNKAFAPYGLPRTAFKPSYGIAEATLLVATIDHAAEPTVVYLDPEQLGAGHATRVAPDAPNAVVHVSCGHVARSLWAVIVDPDTGPEAGAELPDGEIGEVWLQGDNVARGYWGRPEETRMTFGARLQSPLAEGSHADGSAIDDTWLRTGDLGVYLDGELYITGRIADLLTIDGRNHYPQDIEATAAEASPMVRRGYITAFTVPASDGDDRNQRLVIIAERAAGTSRSDPRPALDAIRAAVCNRHGLSVADLSFLPAGAIPRTTSGKLARQACRAQYLSGRLGVH
>NZ_CP012506.2|WP_003409684.1|2163954_2164434_-|MPT63-family-protein
MKLTTMIKTAVAVVAMAAIATFAAPVALAAYPITGKLGSELTMTDTVGQVVLGWKVSDLKSSTAVIPGYPVAGQVWEATATVNAIRGSVTPAVSQFNARTADGINYRVLWQAAGPDTISGATIPQGEQSTGKIYFDVTGPSPTIVAMNNGMEDLLIWEP
>NZ_CP012506.2|WP_003905688.1|2164670_2165444_+|YqjF-family-protein
MTAIPGPSGAEPGESRALAGYPVTPPALPRPVIFDQRWTDLTFIHWPVLPDSVAGSYPPGTRPDVFADGMTYVGLVPFRMSSTKLGTALPIPYVGTFPETNVRLYSIDNAGRHGVLFRSLETARLTVVPLTRIGLGIPYAWSRMRMMRSGKHITYHSVRRWPRRGLRSLLTITIGDLVEPTPLEVWLTARWGAHTRKAGRTWWVPNEHKPWPLRAAEIAELNDELIDASGVQPTGDRLRALFSPGVHARFGRPCVVQ

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Crispr_ID: NZ_CP012506_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012506_9

2153812-2154031

Orphan

Consensus_repeat	Method
GTGCCAGCCGGAATCGTGATCGGCGGAACCGTCACCGACGGAATACTCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP012506_9

>merge|NZ_CP012506|9|2153812-2154031|CRISPRCasFinder
GTGCCAGCCGGAATCGTGATCGGCGGAACCGTCACCGACGGAATACTCAGCGTCGGCAGATTGAACGCACCTAGCGCTGTGCCAGCCGGAATCGTGATCGGCGGAACCGTCACCGACGGAATACTCAACTGAGGCAAGTTAAACGCACCTACCGTGATGTTGGCTGGTGTCGTTGTAGCTGGAATCGTCAACGACGGCACCGTCAACCCCGGCAAATCAA

>NZ_CP012506|9|5|2153812-2154031|CRISPRCasFinder
GTGCCAGCCGGAATCGTGATCGGCGGAACCGTCACCGACGGAATACTCA	GCGTCGGCAGATTGAACGCACCTAGCGCTGTGCCAGCCGGAATCGTGATCGGCGGAACCGTCACCGACGGAATACTCAACTGAGGCAAGTTAAACGCACCTACCGTGATGTTGGCTGGTGTC
GTTGTAGCTGGAATCGTCAACGACGGCACCGTCAACCCCGGCAAATCAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012506.2\|WP_003901288.1\|2156620_2157484_+\|acyltransferase-family-protein	unknown	unknown	gnl\|CDD\|153249
NZ_CP012506.2\|WP_003899076.1\|2138917_2139361_-\|transcriptional-repressor	unknown	unknown	gnl\|CDD\|223806
NZ_CP012506.2\|WP_003409686.1\|2165447_2166215_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|135631
NZ_CP012506.2\|WP_003409584.1\|2143231_2145532_+\|isocitrate-lyase-family-protein	unknown	unknown	gnl\|CDD\|215482
NZ_CP012506.2\|WP_003900434.1\|2161547_2161928_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012506.2\|WP_003409577.1\|2142689_2143097_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012506.2\|WP_003900428.1\|2135207_2135678_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012506.2\|WP_003409568.1\|2140150_2140756_-\|YbhB/YbcL-family-Raf-kinase-inhibitor-like-protein	unknown	unknown	gnl\|CDD\|224793
NZ_CP012506.2\|WP_003409666.1\|2157521_2158793_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|273654
NZ_CP012506.2\|WP_003409574.1\|2141959_2142712_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293840
NZ_CP012506.2\|WP_003902177.1\|2162084_2163947_+\|AMP-binding-protein	unknown	unknown	gnl\|CDD\|171527
NZ_CP012506.2\|WP_003409570.1\|2140855_2141860_-\|zinc-binding-dehydrogenase	unknown	unknown	gnl\|CDD\|176236
NZ_CP012506.2\|WP_003409684.1\|2163954_2164434_-\|MPT63-family-protein	unknown	unknown	gnl\|CDD\|370335
NZ_CP012506.2\|WP_003409566.1\|2139474_2140068_-\|YbhB/YbcL-family-Raf-kinase-inhibitor-like-protein	unknown	unknown	gnl\|CDD\|224793
NZ_CP012506.2\|WP_003899082.1\|2156058_2156523_-\|SRPBCC-family-protein	unknown	unknown	gnl\|CDD\|176863
NZ_CP012506.2\|WP_014585239.1\|2136017_2136482_-\|DUF4262-domain-containing-protein	unknown	unknown	gnl\|CDD\|379457
NZ_CP012506.2\|WP_003905688.1\|2164670_2165444_+\|YqjF-family-protein	unknown	unknown	gnl\|CDD\|225897
NZ_CP012506.2\|WP_003910876.1\|2136657_2138880_-\|catalase/peroxidase-HPI	unknown	unknown	gnl\|CDD\|237891
NZ_CP012506.2\|WP_003409667.1\|2159064_2160180_+\|serine-hydrolase	unknown	unknown	gnl\|CDD\|224594
NZ_CP012506.2\|WP_003900433.1\|2160170_2161511_+\|serine-hydrolase	unknown	unknown	gnl\|CDD\|365903

Protein	Function_ID	Function_description	E-value
NZ_CP012506.2\|WP_003901288.1\|2156620_2157484_+\|acyltransferase-family-protein	gnl\|CDD\|153249	cd07987, LPLAT_MGAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: MGAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this suubgroup are such LPLATs as 2-acylglycerol O-acyltransferase (MGAT), and similar proteins.	4.71059e-64
NZ_CP012506.2\|WP_003899076.1\|2138917_2139361_-\|transcriptional-repressor	gnl\|CDD\|223806	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism].	4.92282e-41
NZ_CP012506.2\|WP_003409584.1\|2143231_2145532_+\|isocitrate-lyase-family-protein	gnl\|CDD\|215482	PLN02892, PLN02892, isocitrate lyase.	2.96208e-144
NZ_CP012506.2\|WP_003409684.1\|2163954_2164434_-\|MPT63-family-protein	gnl\|CDD\|370335	pfam09167, DUF1942, Domain of unknown function (DUF1942). Members of this family of bacterial proteins assume a beta-sandwich structure consisting of two antiparallel beta-sheets similar to an immunoglobulin-like fold, with an additional small, antiparallel beta-sheet. The longer-stranded beta-sheet is made up of four antiparallel beta-strands. The shorter-stranded beta-sheet consists of five beta-strands, four of these beta-strands form an antiparallel beta-sheet. The exact function of this family of proteins is unknown, though a putative role includes involvement in host-bacterial interactions involved in endocytosis or phagocytosis, possibly during bacterial internalisation.	3.87872e-58
NZ_CP012506.2\|WP_003409686.1\|2165447_2166215_-\|SDR-family-oxidoreductase	gnl\|CDD\|135631	PRK05867, PRK05867, SDR family oxidoreductase.	8.21275e-152
NZ_CP012506.2\|WP_003409568.1\|2140150_2140756_-\|YbhB/YbcL-family-Raf-kinase-inhibitor-like-protein	gnl\|CDD\|224793	COG1881, COG1881, Phospholipid-binding protein [General function prediction only].	1.29998e-51
NZ_CP012506.2\|WP_003409666.1\|2157521_2158793_-\|hypothetical-protein	gnl\|CDD\|273654	TIGR01490, Uncharacterized_protein_Rv3661/MT3761, HAD-superfamily subfamily IB hydrolase, TIGR01490. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled here are all bacterial. The IB subfamily includes the enzyme phosphoserine phosphatase (TIGR00338). Due to this relationship, several of these sequences have been annotated as "phosphoserine phosphatase related proteins," or "Phosphoserine phosphatase-family enzymes." There is presently no evidence that any of the enzymes in this model possess PSPase activity. OMNI\|NTL01ML1250 is annotated as a "possible transferase," however this is due to the C-terminal domain found on this sequence which is homologous to a group of glycerol-phosphate acyltransferases (between trusted and noise to TIGR00530). A subset of these sequences including OMNI\|CC1962, the Caulobacter crescentus CicA protein cluster together and may represent a separate equivalog. [Unknown function, Enzymes of unknown specificity].	4.7592e-11
NZ_CP012506.2\|WP_003409574.1\|2141959_2142712_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293840	cd16282, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain. Members of the MBL-fold metallohydrolase superfamily are mainly hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) for which this fold was named perform only a small fraction of the activities included in this superfamily.Activities carried out by superfamily members include class B beta-lactamases, hydroxyacylglutathione hydrolases, AHL (acyl homoserine lactone) lactonases, persulfide dioxygenases, flavodiiron proteins, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J and ribonuclease Z, cyclic nucleotide phosphodiesterases, insecticide hydrolases, and proteins required for natural transformation competence. Classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, however the diversity of biological roles is reflected in variations in the active site metallo-chemistry.	1.95555e-42
NZ_CP012506.2\|WP_003902177.1\|2162084_2163947_+\|AMP-binding-protein	gnl\|CDD\|171527	PRK12476, PRK12476, putative fatty-acid--CoA ligase; Provisional.	0
NZ_CP012506.2\|WP_003409570.1\|2140855_2141860_-\|zinc-binding-dehydrogenase	gnl\|CDD\|176236	cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	1.67964e-153
NZ_CP012506.2\|WP_003905688.1\|2164670_2165444_+\|YqjF-family-protein	gnl\|CDD\|225897	COG3361, COG3361, Uncharacterized conserved protein [Function unknown].	2.68592e-126
NZ_CP012506.2\|WP_003409566.1\|2139474_2140068_-\|YbhB/YbcL-family-Raf-kinase-inhibitor-like-protein	gnl\|CDD\|224793	COG1881, COG1881, Phospholipid-binding protein [General function prediction only].	4.33831e-50
NZ_CP012506.2\|WP_003899082.1\|2156058_2156523_-\|SRPBCC-family-protein	gnl\|CDD\|176863	cd07821, PYR_PYL_RCAR_like, Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins. The PYR/PYL/RCAR-like family belongs to the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain superfamily of proteins that bind hydrophobic ligands. SRPBCC domains have a deep hydrophobic ligand-binding pocket. PYR/PYL/RCAR plant proteins are receptors involved in signal transduction. They bind abscisic acid (ABA) and mediate its signaling. ABA is a vital plant hormone, which regulates plant growth, development, and response to environmental stresses. Upon binding ABA, these plant proteins interact with a type 2C protein phosphatase (PP2C), such as ABI1 and ABI2, and inhibit their activity. When ABA is bound, a loop (designated the gate/CL2 loop) closes over the ligand binding pocket, resulting in the weakening of the inactive PYL dimer and facilitating type 2C protein phosphatase binding. In the ABA:PYL1:ABI1 complex, the gate blocks substrate access to the phosphatase active site. A conserved Trp from PP2C inserts into PYL to lock the receptor in a closed formation. This group also contains Methylobacterium extorquens AM1 MxaD. The mxaD gene is located within the mxaFJGIR(S)ACKLDEHB cluster which encodes proteins involved in methanol oxidation. MxaD may participate in the periplasmic electron transport chain for oxidation of methanol. Mutants lacking MxaD exhibit a reduced growth on methanol, and a lower rate of respiration with methanol.	1.38133e-21
NZ_CP012506.2\|WP_014585239.1\|2136017_2136482_-\|DUF4262-domain-containing-protein	gnl\|CDD\|379457	pfam14081, DUF4262, Domain of unknown function (DUF4262). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and viruses. Proteins in this family are typically between 147 and 227 amino acids in length. Some members may be incorrectly annotated as the KatG protein.	7.86857e-31
NZ_CP012506.2\|WP_003910876.1\|2136657_2138880_-\|catalase/peroxidase-HPI	gnl\|CDD\|237891	PRK15061, PRK15061, catalase/peroxidase.	0
NZ_CP012506.2\|WP_003409667.1\|2159064_2160180_+\|serine-hydrolase	gnl\|CDD\|224594	COG1680, AmpC, Beta-lactamase class C and other penicillin binding proteins [Defense mechanisms].	8.61879e-60
NZ_CP012506.2\|WP_003900433.1\|2160170_2161511_+\|serine-hydrolase	gnl\|CDD\|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	7.07573e-54

>NZ_CP012506.2|WP_003409584.1|2143231_2145532_+|isocitrate-lyase-family-protein
MAIAETDTEVHTPFEQDFEKDVAATQRYFDSSRFAGIIRLYTARQVVEQRGTIPVDHIVAREAAGAFYERLRELFAARKSITTFGPYSPGQAVSMKRMGIEAIYLGGWATSAKGSSTEDPGPDLASYPLSQVPDDAAVLVRALLTADRNQHYLRLQMSERQRAATPAYDFRPFIIADADTGHGGDPHVRNLIRRFVEVGVPGYHIEDQRPGTKKCGHQGGKVLVPSDEQIKRLNAARFQLDIMRVPGIIVARTDAEAANLIDSRADERDQPFLLGATKLDVPSYKSCFLAMVRRFYELGVKELNGHLLYALGDSEYAAAGGWLERQGIFGLVSDAVNAWREDGQQSIDGIFDQVESRFVAAWEDDAGLMTYGEAVADVLEFGQSEGEPIGMAPEEWRAFAARASLHAARAKAKELGADPPWDCELAKTPEGYYQIRGGIPYAIAKSLAAAPFADILWMETKTADLADARQFAEAIHAEFPDQMLAYNLSPSFNWDTTGMTDEEMRRFPEELGKMGFVFNFITYGGHQIDGVAAEEFATALRQDGMLALARLQRKMRLVESPYRTPQTLVGGPRSDAALAASSGRTATTKAMGKGSTQHQHLVQTEVPRKLLEEWLAMWSGHYQLKDKLRVQLRPQRAGSEVLELGIHGESDDKLANVIFQPIQDRRGRTILLVRDQNTFGAELRQKRLMTLIHLWLVHRFKAQAVHYVTPTDDNLYQTSKMKSHGIFTEVNQEVGEIIVAEVNHPRIAELLTPDRVALRKLITKEA
>NZ_CP012506.2|WP_003409577.1|2142689_2143097_-|hypothetical-protein
MVLSRTSTGRVILVPTQLRFDRWFLPLAVPLGLGPKNSELWVGAGSLHVKMGWAFAADIPLTSITKAEATNARVYAAGVHFGFGRWLVNGSRKGLVALTIDPPEQAKMWKKSMTVRELWVSVTDPDALVTACTAK
>NZ_CP012506.2|WP_003409574.1|2141959_2142712_+|MBL-fold-metallo-hydrolase
MHFDWERLTDSVHRCRLPFCDVTVGLVRGRTGILLVDTGTTLGEATAIAADVKQIAGCQVTHVVLTHKHFDHVLGSSVFDQAEVFCAPEVVEYLRSATDRLREDALSYGADTAEVDRAIAALKPPQHGIYDAAVDLGDRTVTITHPGSGHTTADLVVVAPATGHADGPTVVFTGDLVEESADPDIDADSDLAAWPATLDRVLAIGGPDASYVPGHGKVVDAQFVRRQRAWLRTRASRQPRETPATLPCKR
>NZ_CP012506.2|WP_003409570.1|2140855_2141860_-|zinc-binding-dehydrogenase
MRAVVITKHGDPSVLQVRQRPDPPPPGPGQLRVAVRAAGVNFADHLARVGLYPDAPKLPAVVGYEVAGTVEAVGDGVDPNRVGERVLAGTRFGGYCEIVNVAATDSVVLPDALSFEQGAAVPVNYATAWAALHGYGSLRAGERVLIHAAAGGVGIAAVQFAKAAKAEVHGTASPQKHQKLAEFGVDRAIDYRRDGWWQGLGPYDVVLDALGGTSLRRSYTLLRPGGRLVGYGISNMQHGEKRSMRRVAPHALSMLRGFNLMKQLEESKTVIGLNMLRLWDDRRTLEPWIAPLTKALNDGTILPIVHAIVPFAEAPEAHRILAARENVGKVVLVP
>NZ_CP012506.2|WP_003409568.1|2140150_2140756_-|YbhB/YbcL-family-Raf-kinase-inhibitor-like-protein
MTSTLHRTPLATAGLALVVALGGCGGGGGDSRETPPYVPKATTVDATTPAPAAEPLTIASPMFADGAPIPVQFSCKGANVAPPLTWSSPAGAAELALVVDDPDAVGGLYVHWIVTGIAPGSGSTADGQTPAGGHSVPNSGGRQGYFGPCPPAGTGTHHYRFTLYHLPVALQLPPGATGVQAAQAIAQAASGQARLVGTFEG
>NZ_CP012506.2|WP_003409566.1|2139474_2140068_-|YbhB/YbcL-family-Raf-kinase-inhibitor-like-protein
MAHAFHRFALAILGLALPVALVAYGGNGDSRKAAPLAPKAAALGRSMPETPTGDVLTISSPAFADGAPIPEQYTCKGANIAPPLTWSAPFGGALVVDDPDAPREPYVHWIVIGIAPGAGSTADGETPGGGISLPNSSGQPAYTGPCPPAGTGTHHYRFTLYHLPAVPPLAGLAGTQAARVIAQAATMQARLIGTYEG
>NZ_CP012506.2|WP_003899076.1|2138917_2139361_-|transcriptional-repressor
MSSIPDYAEQLRTADLRVTRPRVAVLEAVNAHPHADTETIFGAVRFALPDVSRQAVYDVLHALTAAGLVRKIQPSGSVARYESRVGDNHHHIVCRSCGVIADVDCAVGEAPCLTASDHNGFLLDEAEVIYWGLCPDCSISDTSRSHP
>NZ_CP012506.2|WP_003910876.1|2136657_2138880_-|catalase/peroxidase-HPI
MPEQHPPITETTTGAASNGCPVVGHMKYPVEGGGNQDWWPNRLNLKVLHQNPAVADPMGAAFDYAAEVATIDVDALTRDIEEVMTTSQPWWPADYGHYGPLFIRMAWHAAGTYRIHDGRGGAGGGMQRFAPLNSWPDNASLDKARRLLWPVKKKYGKKLSWADLIVFAGNCALESMGFKTFGFGFGRVDQWEPDEVYWGKEATWLGDERYSGKRDLENPLAAVQMGLIYVNPEGPNGNPDPMAAAVDIRETFRRMAMNDVETAALIVGGHTFGKTHGAGPADLVGPEPEAAPLEQMGLGWKSSYGTGTGKDAITTGIEVVWTNTPTKWDNSFLEILYGYEWELTKSPAGAWQYTAKDGAGAGTIPDPFGGPGRSPTMLATDLSLRVDPIYERITRRWLEHPEELADEFAKAWYKLIHRDMGPVARYLGPLVPKQTLLWQDPVPAVSHDLVGEAEIASLKSQILASGLTVSQLVSTAWAAASSFRGSDKRGGANGGRIRLQPQVGWEVNDPDGDLRKVIRTLEEIQESFNSAAPGNIKVSFADLVVLGGCAAIEKAAKAAGHNITVPFTPGRTDASQEQTDVESFAVLEPKADGFRNYLGKGNPLPAEYMLLDKANLLTLSAPEMTVLVGGLRVLGANYKRLPLGVFTEASESLTNDFFVNLLDMGITWEPSPADDGTYQGKDGSGKVKWTGSRVDLVFGSNSELRALVEVYGADDAQPKFVQDFVAAWDKVMNLDRFDVR
>NZ_CP012506.2|WP_014585239.1|2136017_2136482_-|DUF4262-domain-containing-protein
MCDHPEATAEEYLDEVYGIMLMHGWAVQHVECERRPFAYTVGLTRRGLPELVVTGLSPRRGQRLLNIAARRALVGDLLTPGMQTTLPAGPLVETVQVTHPDAHLYCAIAIFGDKVTALQLVWADRRGRWPWAADFDEGRGTQPVLGMRATRRSA
>NZ_CP012506.2|WP_003900428.1|2135207_2135678_-|hypothetical-protein
MRLKPAPSPAAAFAVAGLILAGWAGSVGLAGADPEPAPTPKTAIDSDGTYAVGIDIAPGTYSSAGPVGDGTCYWKRMGNPDGALIDNALSKKPQVVTIEPTDKAFKTHGCQPWQNTGSEGAAPAGVPGPEAGAQLQNQLGILNGLLGPTGGRVPQP
>NZ_CP012506.2|WP_003899082.1|2156058_2156523_-|SRPBCC-family-protein
MSGRKFSFEVTKTSSAPAATLFRLVTDGGNWATWAKPIVAQSSWARRGDPAPGGIGAIRKLGMWPVFVQEETVEYEQDRRHVYKLVGARTPVQDYFGEVVLTPNASGGTDLRWSGSFTEKVRGTGPVMRAALGGAVRFFAGQLVKAAEREAVRR
>NZ_CP012506.2|WP_003901288.1|2156620_2157484_+|acyltransferase-family-protein
MFPRWPQQAHNHEVSRADTVSVPRAPTQAEVAAVLRIMTPLRKVIKPKVYGIENVPTERALLVGNHNTLGLVDAPLLAAELWERGRIVRSLGDHAHFKIPGWRDALTRTGVVEGTREITSELMRRGELVMVFPGGAREVNKRKNERYKLVWKNRLGFARLAIQHGYPIVPFASVGAEHGIDIVLDNESPLLAPVQFLAEKLLGTKDGPALVRGVGLTPVPRPERQYYWFGEPIDTTEFMGQQADDNAARRVRARAAAAIEHGIELMLAERAADPNRSLVGRLLRSDA
>NZ_CP012506.2|WP_003409666.1|2157521_2158793_-|hypothetical-protein
MVRLIPSLLAMATVLGGVIGCSAHQPPTPASGCRQLDAFLKWHHGVREFLQSAIDANSRCTGTADGSARKVAIFDWDNTVVKNDIGYATNYYMLQHSLVLQPANQDWHAASRYLTDAAANALSVACGKVVPAGKPLPTGSNALCANEILSLLDGETTTGQPAFVGNNVRRLAGPYAWSNALSAGYTAEELAGFADQAKKQNLAADVGATQQVGTQQVDGYIRVYPQMKDLIGTLQAHGIDTWVVSASPEPIVKVWAGEVGLDDQHVVGVRSVADQSGKLTAHLVGCGGVRDGDDSVMTYLDGKRCWANQVIFGVTGPQAFNQLAADRRQVLAAGDSNSDATFVGDATVVSLVINRNQDDLMCRAYDGLFTRGGKWAINPMFIDPLPQHAPYVCGEAFINPDGSKQPVLRNDGTPIPDQVDSVF
>NZ_CP012506.2|WP_003409667.1|2159064_2160180_+|serine-hydrolase
MDSTVTASIRRMLGLLAATLLLGGCTGQHTTRTAASTTYTPHIKASSQDVLDGAINADEPGCSAAVGVEGKVIWSGVRGIADLASGAKITTDTVFDIASVSKQFTATAILLLVEAGKLTLDDPISQYVPELPDWAQTVTVEQLMHQTSGIPDYVALLAARGYQVSDRTIEAEARQALAAAPELQFKPGTRFDYSNSNYLLLGEIVHRASGQPLPEFLSAEIFQPLGLAMVVDPVGKVPNKAVSYEKGTGGNRSEYRVGNPAWEQIGDGGIQTTPSQLARWADNYRTGSVGGLKLLEAQLAGAVETEPGGGDRYGAGIVSRADGTLDHAGAWAGFVTAFHISSDRRTSVAISCNTDKPDPVAMADALGRLWM
>NZ_CP012506.2|WP_003900433.1|2160170_2161511_+|serine-hydrolase
MDVAGLPRLAAGTQAAIIHGMAQPPSLLTTDNGLPFGVQGACDSRFTGVIRAFAGLYPGRKFGGGALSVYIDGRQVVDVWTGWSDRQGKVPWTADTGAMVFSATKGLAATVIHRLVDRGLLSYDAPVAEYWPEFGANGKSEVTVSDVLRHRSGLAHLKGVDKDEVMDHLLMEQKLAAAPLDRQHGKLAYHAVTYGWLLSGLARAVTGKGMRELFREELARPLNTDGIHLGRPPADSPTKAAQTLLPQAKVPTPLLDFIAPKVAGLSFSGLLGAVYFPGILSLLQDDMPFLDGEVPAVNGVVTARALAKTYGALANDGVIDGTRLLSSQAVRGLTGKSELWPDLNLGLPFTYHQGYQSSPVPGLLEGYGHIGLGGTIGWADPETGSAFGYVHNRLLTLLLFDIGSFAGLAALLNSAVVAARRDDPLEVPHFGAPYSEPRHEQAASGA
>NZ_CP012506.2|WP_003900434.1|2161547_2161928_-|hypothetical-protein
MDPADVINPTSTRDAALARVLAYRQRVRARPLLIRATLAVVGGGLFVVSLPMIVLLPELGIPALLVAFRLLAVEAQWAVRAYAWTDWRFTQLREWFHRQVLVTRAAILVGLFLAAVALVWLLVYEF
>NZ_CP012506.2|WP_003902177.1|2162084_2163947_+|AMP-binding-protein
MNDGSRQELRVRSGLLQIEDCLDADGGIALPAGTTLISLIERNIKYVGDLVAYRYLDHARSAAGCALEVTWTQFGMRLAAIGAHVQRFAGPGDCVAILAPQGIDYVCGFYAAIKAGTVAVPLFAPELPGHAERLDTALRDSEPAVILTTAAAKNAVEGFLNNVPRLRKPTVLVIDQIPDREGELFVPVELDIDAVSHLQYTSGSTRPPVGVEITHRAVGTNLVQMILSIDLLNRNTHGVSWLPLYHDMGLSMIGFPAVYGGHSTLMSPTAFVRRPLRWIQALSEGSRTGRVVTAAPNFAYEWAAQRGLPAQGDDVDLSNVVLIIGSEPVSIDAVTTFNKAFAPYGLPRTAFKPSYGIAEATLLVATIDHAAEPTVVYLDPEQLGAGHATRVAPDAPNAVVHVSCGHVARSLWAVIVDPDTGPEAGAELPDGEIGEVWLQGDNVARGYWGRPEETRMTFGARLQSPLAEGSHADGSAIDDTWLRTGDLGVYLDGELYITGRIADLLTIDGRNHYPQDIEATAAEASPMVRRGYITAFTVPASDGDDRNQRLVIIAERAAGTSRSDPRPALDAIRAAVCNRHGLSVADLSFLPAGAIPRTTSGKLARQACRAQYLSGRLGVH
>NZ_CP012506.2|WP_003409684.1|2163954_2164434_-|MPT63-family-protein
MKLTTMIKTAVAVVAMAAIATFAAPVALAAYPITGKLGSELTMTDTVGQVVLGWKVSDLKSSTAVIPGYPVAGQVWEATATVNAIRGSVTPAVSQFNARTADGINYRVLWQAAGPDTISGATIPQGEQSTGKIYFDVTGPSPTIVAMNNGMEDLLIWEP
>NZ_CP012506.2|WP_003905688.1|2164670_2165444_+|YqjF-family-protein
MTAIPGPSGAEPGESRALAGYPVTPPALPRPVIFDQRWTDLTFIHWPVLPDSVAGSYPPGTRPDVFADGMTYVGLVPFRMSSTKLGTALPIPYVGTFPETNVRLYSIDNAGRHGVLFRSLETARLTVVPLTRIGLGIPYAWSRMRMMRSGKHITYHSVRRWPRRGLRSLLTITIGDLVEPTPLEVWLTARWGAHTRKAGRTWWVPNEHKPWPLRAAEIAELNDELIDASGVQPTGDRLRALFSPGVHARFGRPCVVQ
>NZ_CP012506.2|WP_003409686.1|2165447_2166215_-|SDR-family-oxidoreductase
MSVLDLFDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYTEYQPLWEPKIPLGRLGRPEELAGLYLYLASEASSYMTGSDIVIDGGYTCP

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Crispr_ID: NZ_CP012506_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012506_10

3114254-3115401

TypeIII

II-B,III-A

Consensus_repeat	Method
GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC	PILER-CR
GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC	CRISPRCasFinder
NNNNNNNNGTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC	CRT

15 spacers

csm3gr7,csm2gr11,cas10,cas6

The CRISPR arrays of NZ_CP012506_10

>merge|NZ_CP012506|10|3114254-3115401|PILER-CR,CRISPRCasFinder,CRT
GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACTCGGGCACGGCCGAAACACCGCGCGAAGGGCGGTTCAAGTTTCCGTCCCCTCTCGTGGTTTTGGGTCTGACGACTGGGAGGATGTCACTCGGACATAGCTGTCATCGGCGGTGTGTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGAGGACATGGAGCAGTAGCGTGGCTGTGGTGTGGCGGGCGATATGCGTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACTGCTGCACCTCCCGCACCCGGTGCGATTCTGCGTCCAGTTTCCGTCCCCTCTCGGGGTTTTGGGTCCGACGACCCCGATAGTCGCGCTCGTCCATGTCCCACCATGAGGGTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACTACCTGATAGAAGCCGGAAAGCTCCGTGCCGTCAGGTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACAGGGCACTGGACCTGTATGAGGCACAGATGGCGTACTAGTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACCCGGATCGGTTACCCACGCCGATTTACTGGCCATCGTCGGGTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACACTTGCGCGCACAACGCATCCGCCATCCACGGGGCGTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACCTGAAAGGGGGACTGTGGACGAGTTCGCGCTCAAAATGTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACGCGAGAATAAGATTGTCAGGCTGGTGCTGCGTTTCCGTGTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACACTCTCAACCGCGCCACGCTCAAAAAAAGTGTTATTGAGTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACCCGCTGGGGGCAGGCCCAGGTGGGACGGTTCCTCGCGTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACTTCGGGAGCATGCCGCAGCTGCGGATGTGGTGCTGGATTTCGAGTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACACGTTGGAAGCGTTTCGAGCGTACGGACTTTCCGGATGCAGGTTTCCGTCCCCTCTCTGAACCGCCCCGGCATGTCC

>NZ_CP012506|10|2|3114254-3115173|PILER-CR
GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC	TCGGGCACGGCCGAAACACCGCGCGAAGGGCGGTTCAA
GTTTCCGTCCCCTCTCGTGGTTTTGGGTCTGACGAC	TGGGAGGATGTCACTCGGACATAGCTGTCATCGGCGGTGT
GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGAGGAC	ATGGAGCAGTAGCGTGGCTGTGGTGTGGCGGGCGATATGC
GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC	TGCTGCACCTCCCGCACCCGGTGCGATTCTGCGTCCA
GTTTCCGTCCCCTCTCGGGGTTTTGGGTCCGACGAC	CCCGATAGTCGCGCTCGTCCATGTCCCACCATGAGG
GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC	TACCTGATAGAAGCCGGAAAGCTCCGTGCCGTCAG
GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC	AGGGCACTGGACCTGTATGAGGCACAGATGGCGTACTA
GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC	CCGGATCGGTTACCCACGCCGATTTACTGGCCATCGTCGG
GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC	ACTTGCGCGCACAACGCATCCGCCATCCACGGGGC
GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC	CTGAAAGGGGGACTGTGGACGAGTTCGCGCTCAAAAT
GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC	GCGAGAATAAGATTGTCAGGCTGGTGCTGCGTTTCCGT
GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC	ACTCTCAACCGCGCCACGCTCAAAAAAAGTGTTATTGA
GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC

>NZ_CP012506|10|6|3114254-3115324|CRISPRCasFinder
GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC	TCGGGCACGGCCGAAACACCGCGCGAAGGGCGGTTCAA
GTTTCCGTCCCCTCTCGTGGTTTTGGGTCTGACGAC	TGGGAGGATGTCACTCGGACATAGCTGTCATCGGCGGTGT
GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGAGGAC	ATGGAGCAGTAGCGTGGCTGTGGTGTGGCGGGCGATATGC
GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC	TGCTGCACCTCCCGCACCCGGTGCGATTCTGCGTCCA
GTTTCCGTCCCCTCTCGGGGTTTTGGGTCCGACGAC	CCCGATAGTCGCGCTCGTCCATGTCCCACCATGAGG
GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC	TACCTGATAGAAGCCGGAAAGCTCCGTGCCGTCAG
GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC	AGGGCACTGGACCTGTATGAGGCACAGATGGCGTACTA
GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC	CCGGATCGGTTACCCACGCCGATTTACTGGCCATCGTCGG
GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC	ACTTGCGCGCACAACGCATCCGCCATCCACGGGGC
GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC	CTGAAAGGGGGACTGTGGACGAGTTCGCGCTCAAAAT
GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC	GCGAGAATAAGATTGTCAGGCTGGTGCTGCGTTTCCGT
GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC	ACTCTCAACCGCGCCACGCTCAAAAAAAGTGTTATTGA
GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC	CCGCTGGGGGCAGGCCCAGGTGGGACGGTTCCTCGC
GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC	TTCGGGAGCATGCCGCAGCTGCGGATGTGGTGCTGGATTTCGA
GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC

>NZ_CP012506|10|4|3114254-3115401|CRT
GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC	TCGGGCACGGCCGAAACACCGCGCGAAGGGCGGTTCAA
GTTTCCGTCCCCTCTCGTGGTTTTGGGTCTGACGAC	TGGGAGGATGTCACTCGGACATAGCTGTCATCGGCGGTGT
GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGAGGAC	ATGGAGCAGTAGCGTGGCTGTGGTGTGGCGGGCGATATGC
GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC	TGCTGCACCTCCCGCACCCGGTGCGATTCTGCGTCCA
GTTTCCGTCCCCTCTCGGGGTTTTGGGTCCGACGAC	CCCGATAGTCGCGCTCGTCCATGTCCCACCATGAGG
GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC	TACCTGATAGAAGCCGGAAAGCTCCGTGCCGTCAG
GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC	AGGGCACTGGACCTGTATGAGGCACAGATGGCGTACTA
GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC	CCGGATCGGTTACCCACGCCGATTTACTGGCCATCGTCGG
GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC	ACTTGCGCGCACAACGCATCCGCCATCCACGGGGC
GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC	CTGAAAGGGGGACTGTGGACGAGTTCGCGCTCAAAAT
GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC	GCGAGAATAAGATTGTCAGGCTGGTGCTGC
GTTTCCGTGTTTCCGTCCCCTCTCGGGGTTTTGGGT	CTGACGACACTCTCAACCGCGCCACGCTCAAAAAAAGTGTTATTGA
GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC	CCGCTGGGGGCAGGCCCAGGTGGGACGGTTCCTCGC
GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC	TTCGGGAGCATGCCGCAGCTGCGGATGTGGTGCTGGATTTCGA
GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC	ACGTTGGAAGCGTTTCGAGCGTACGGACTTTCCGGATGCAG
GTTTCCGTCCCCTCTCTGAACCGCCCCGGCATGTCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012506.2\|WP_003910939.1\|3124601_3125147_-\|DUF1802-family-protein	unknown	unknown	gnl\|CDD\|226743
NZ_CP012506.2\|WP_003912014.1\|3120583_3121306_-\|CRISPR-associated-endoribonuclease-Cas6	cas6	COG5551_cas6_CAS-III	gnl\|CDD\|227838
NZ_CP012506.2\|WP_003899489.1\|3110114_3110372_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012506.2\|WP_003414296.1\|3117777_3118152_-\|type-III-A-CRISPR-associated-protein-Csm2	csm2gr11	cd09647_csm2gr11_CAS-III-A	gnl\|CDD\|273844
NZ_CP012506.2\|WP_003414184.1\|3108336_3108528_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012506.2\|WP_003917684.1\|3107533_3107788_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012506.2\|WP_003414181.1\|3107935_3108340_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012506.2\|WP_003414198.1\|3111886_3113296_+\|DDE-type-integrase/transposase/recombinase	unknown	unknown	gnl\|CDD\|366234
NZ_CP012506.2\|WP_003414414.1\|3123409_3124297_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|370470
NZ_CP012506.2\|WP_003414489.1\|3125143_3125413_-\|DUF2277-family-protein	unknown	unknown	gnl\|CDD\|227839
NZ_CP012506.2\|WP_003414292.1\|3117057_3117768_-\|type-III-A-CRISPR-associated-RAMP-protein-Csm3	csm3gr7	cd09684_csm3gr7_CAS-III-A:CAS-III-D	gnl\|CDD\|187815
NZ_CP012506.2\|WP_003414190.1\|3110476_3110788_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012506.2\|WP_003900580.1\|3118148_3120587_-\|type-III-A-CRISPR-associated-protein-Cas10/Csm1	cas10	COG1353_cas10_CAS-III	gnl\|CDD\|187811
NZ_CP012506.2\|WP_003414409.1\|3122522_3123407_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225162
NZ_CP012506.2\|WP_003414195.1\|3111207_3111816_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012506.2\|WP_087902221.1\|3115432_3116694_+\|IS3-like-element-IS987-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP012506.2\|WP_003899491.1\|3113292_3114105_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|225806
NZ_CP012506.2\|WP_003911993.1\|3107082_3107358_+\|DUF1778-domain-containing-protein	unknown	unknown	gnl\|CDD\|226860
NZ_CP012506.2\|WP_003899488.1\|3108726_3109881_+\|DDE-type-integrase/transposase/recombinase	unknown	unknown	gnl\|CDD\|366234
NZ_CP012506.2\|WP_014584866.1\|3121705_3122251_-\|DUF1802-family-protein	unknown	unknown	gnl\|CDD\|226743

Protein	Function_ID	Function_description	E-value
NZ_CP012506.2\|WP_003912014.1\|3120583_3121306_-\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|227838	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense mechanisms].	1.14295e-72
NZ_CP012506.2\|WP_003414296.1\|3117777_3118152_-\|type-III-A-CRISPR-associated-protein-Csm2	gnl\|CDD\|273844	TIGR01870, CRISPR_type_III-associated_protein_Csm2, CRISPR type III-A/MTUBE-associated protein Csm2. These proteins are found adjacent to a characteristic short, palidromic repeat cluster termed CRISPR, a probable mobile DNA element. This model represents the C-terminal domain of a minor family of CRISPR-associated protein from the Mtube subtype of CRISPR/Cas locus. The family is designated Csm2, for CRISPR/Cas Subtype Mtube Protein 2.	4.56134e-21
NZ_CP012506.2\|WP_003900580.1\|3118148_3120587_-\|type-III-A-CRISPR-associated-protein-Cas10/Csm1	gnl\|CDD\|187811	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Multidomain protein with permuted HD nuclease domain, palm domain and Zn-ribbon; signature gene for type III; also known as Csm1 family.	0
NZ_CP012506.2\|WP_003911993.1\|3107082_3107358_+\|DUF1778-domain-containing-protein	gnl\|CDD\|226860	COG4453, COG4453, Uncharacterized protein conserved in bacteria [Function unknown].	1.95042e-26
NZ_CP012506.2\|WP_003414409.1\|3122522_3123407_-\|hypothetical-protein	gnl\|CDD\|225162	COG2253, COG2253, Uncharacterized conserved protein [Function unknown].	3.55008e-105
NZ_CP012506.2\|WP_087902221.1\|3115432_3116694_+\|IS3-like-element-IS987-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	4.28492e-102
NZ_CP012506.2\|WP_003414489.1\|3125143_3125413_-\|DUF2277-family-protein	gnl\|CDD\|227839	COG5552, COG5552, Uncharacterized conserved protein [Function unknown].	9.26436e-31
NZ_CP012506.2\|WP_003414292.1\|3117057_3117768_-\|type-III-A-CRISPR-associated-RAMP-protein-Csm3	gnl\|CDD\|187815	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	4.36536e-99
NZ_CP012506.2\|WP_003910939.1\|3124601_3125147_-\|DUF1802-family-protein	gnl\|CDD\|226743	COG4293, COG4293, Uncharacterized protein conserved in bacteria [Function unknown].	1.22881e-84
NZ_CP012506.2\|WP_003414414.1\|3123409_3124297_-\|hypothetical-protein	gnl\|CDD\|370470	pfam09407, AbiEi_1, AbiEi antitoxin C-terminal domain. AbiEi_1 is the cognate antitoxin of the type IV toxin-antitoxin 'innate immunity' bacterial abortive infection (Abi) system that protects bacteria from the spread of a phage infection. The Abi system is activated upon infection with phage to abort the cell thus preventing the spread of phage through viral replication. There are some 20 or more Abis, and they are predominantly plasmid-encoded lactococcal systems. TA, toxin-antitoxin, systems on plasmids function by killing cells that lose the plasmid upon division. AbiE phage resistance systems function as novel Type IV TAs and are widespread in bacteria and archaea. The cognate antitoxin is pfam13338.	2.43998e-38
NZ_CP012506.2\|WP_003899491.1\|3113292_3114105_+\|AAA-family-ATPase	gnl\|CDD\|225806	COG3267, ExeA, Type II secretory pathway, component ExeA (predicted ATPase) [Intracellular trafficking and secretion].	3.94464e-110
NZ_CP012506.2\|WP_003414198.1\|3111886_3113296_+\|DDE-type-integrase/transposase/recombinase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	7.41102e-28
NZ_CP012506.2\|WP_003899488.1\|3108726_3109881_+\|DDE-type-integrase/transposase/recombinase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	1.94329e-16
NZ_CP012506.2\|WP_014584866.1\|3121705_3122251_-\|DUF1802-family-protein	gnl\|CDD\|226743	COG4293, COG4293, Uncharacterized protein conserved in bacteria [Function unknown].	2.51205e-85

>NZ_CP012506.2|WP_003899491.1|3113292_3114105_+|AAA-family-ATPase
MMHKLISYYGFSRMPFGRDLAPGMLHRHSAHNEAVARIGWCIADRRIGVITGEVGAGKTVAVRAALASLDRSRHTIIYLPDPTVGVQGIHHRIVASLGGQPLTHHATLAPQAADALAAEQAERGRTPVVVVEEAHLLGYDQLEALRLLTNHDLDSSSPFACLLIGQPTLRRRMKLGVLAALDQRIGLRYAMPPMTDTNTGSYLRHHLKLAGRDDALFSDDAIGLIHQTSRGYPRAVNNLALQALVAAFAADKAIVDESTTRTAIAEVTAD
>NZ_CP012506.2|WP_003414198.1|3111886_3113296_+|DDE-type-integrase/transposase/recombinase
MAVGDDEEKVRAERARAIGLFRYQLIWEAADAAHSTKQRGKMVRELASREHTDPFGRRVRISRQTIDRWIRGWRAGGFDALVPNPRQCTPRTPAEVLELAVALRRENPQRTAAAIRRILRTQLGWAPDERTLQRNFHRLGLTGATTGSAPAVFGRFEAEHPNALWTGDVLHGIRIDLRKTYLFAFLDDHSRLVPGYRWGHAEDTVRLAAALRPALASRGVPNAVYVDNGSPYVDAWLLRACAKLGVRLVHSTPGRPQGRGKIERFFRTVREQFLVEITGEPDVVGRHYVADLAELNRLFTAWVETVYHRSVHSETGQTPLARWSAGGPIPLPAPETLTEAFLWEEHRRVTKTATVSLHGNRYEIDPALVGRKVELVFDPFDLTRIEVRLAGAPMGRAIPYHIGRHSHPKAKPETPTAPPKPSGIDYAQLIETAHAAELARGVNYTALTGAADQIPGQLDLLTGQEAQPK
>NZ_CP012506.2|WP_003414195.1|3111207_3111816_+|hypothetical-protein
MVTVEADVDQVERRLAAGELSCPSCGGVLAGWGRARSRQLRGPAGPVELCPRRSRCTGCGVTHVLLPVSALLRRADTAAVIVSALAAKATSRVGFRRIATDVARPAETVRGWLRRFAERVEAVRSVFTVWLCAVDADPVMPDAGGGGFVDAVVAIGALAAAIGRRFSLPTVSLAETAVAVSGGRLLAPGWPGEWVQHESTLP
>NZ_CP012506.2|WP_003414190.1|3110476_3110788_+|hypothetical-protein
MTYAARDDTTLPKLLAQMRWVVLVDKRQLAVLLLENEGPVASATDTLDTRGDSDYENQPVDAVERLCRRLADQAVRQWGFMQGLKQKLGPGVDVRMKLVEWNR
>NZ_CP012506.2|WP_003899489.1|3110114_3110372_+|hypothetical-protein
MSNVLDAISTEHRPVIEQELENRNPALFDELRRTEKPTNEQSDAVIDVLSDALMKTFGPDWVPNDYGLKIERAIDAYLETWPIYR
>NZ_CP012506.2|WP_003899488.1|3108726_3109881_+|DDE-type-integrase/transposase/recombinase
MVSTTGMGRSTARRMLTGPGLPEPAEQVDGRRLRARGFSDDARALLEHVWALMGMPCGKYLVVMLELWLPLVAAAGDLDKPFATEAAVAELKAMSAATVDRYLKPARERMRIKGISTTKPSPLLRNSITIHTCSDEAPKVPGVIEADTVAHCGPSLIGEFARTLTMTDLVTGWTENASIRNNAAKWILEGIKECQQRFPFPMTVFDSDCGGEFINHDVAGWLQARDIAQTRSRPYQKNDQAHVESKNNHVVRKHAFYWRYDTGEELELLNRLWPLVSLRCNFFTPTKKPVGYTSTVNGRRKRIYDKPATPWQRLQASGVLDAQQLSTVAARIEGFNPADLTRQINAIQMQLLDLAKTKTEALATARHIDLQSLQPSINRLAKAK
>NZ_CP012506.2|WP_003414184.1|3108336_3108528_+|hypothetical-protein
MKTNPRYGPAFYSVMTVLFLALFVLNVCTHGSTLGLISTGGLAVLMGYIGYRGWSGKRHINRQ
>NZ_CP012506.2|WP_003414181.1|3107935_3108340_+|hypothetical-protein
MGRDNGKILDPVVATTGMGRSTARQMLTGPRLPGPAEQVDGRSLRPRGFSDEARALLEHVWALMGMPCGKYLVVMHDLWLPLLTAAGDLDKPLVTEASVAELKATALPGANRMPHWAAGTLPDGFPARAVRTRT
>NZ_CP012506.2|WP_003917684.1|3107533_3107788_-|hypothetical-protein
MTVELGGAVVDGVDDQGAGAVVPGTGHGSDEGIEEKIATETGALLLPVERQASEDEHWDRVGSGWPRPGRDGTRIRSMLPMASA
>NZ_CP012506.2|WP_003911993.1|3107082_3107358_+|DUF1778-domain-containing-protein
MPETLTGRLNFRLSPEQEQALRHAAALTGQSLSGFVLSAAVDHAHDLLARANRIELSEAAFRRFVAALDEPDEAAPELVRLARRKSRIPPH
>NZ_CP012506.2|WP_087902221.1|3115432_3116694_+|IS3-like-element-IS987-family-transposase
MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVDAGARPGTTTEESAELKRLRRDNAELRRANAILKTASGFLRGRARPASTLITRFIADHQGHREGPDGLRWGVESICTQLTELGVPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGARKVWLTLNREGIEVARCTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPAPNRLWVADLTYVSTWAGFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQEGVLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELIKPGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG
>NZ_CP012506.2|WP_003414292.1|3117057_3117768_-|type-III-A-CRISPR-associated-RAMP-protein-Csm3
MTTSYAKIEITGTLTVLTGLQIGAGDGFSAIGAVDKPVVRDPLSRLPMIPGTSLKGKVRTLLSRQYGADTETFYRKPNEDHAHIRRLFGDTEEYMTGRLVFRDTKLTNKDDLEARGAKTLTEVKFENAINRVTAKANLRQMERVIPGSEFAFSLVYEVSFGTPGEEQKASLPSSDEIIEDFNAIARGLKLLELDYLGGSGTRGYGQVKFSNLKARAAVGALDGSLLEKLNHELAAV
>NZ_CP012506.2|WP_003414296.1|3117777_3118152_-|type-III-A-CRISPR-associated-protein-Csm2
MSVIQDDYVKQAEVIRGLPKKKNGFELTTTQLRVLLSLTAQLFDEAQQSANPTLPRQLKEKVQYLRVRFVYQSGREDAVKTFVRNAKLLEALEGIGDSRDGLLRFCRYMEALAAYKKYLDPKDK
>NZ_CP012506.2|WP_003900580.1|3118148_3120587_-|type-III-A-CRISPR-associated-protein-Cas10/Csm1
MNPQLIEAIIGCLLHDIGKPVQRAALGYPGRHSAIGRAFMKKVWLRDSRNPSQFTDEVDEADIGVSDRRILDAISYHHSSALRTAAENGRLAADAPAYIAYIADNIAAGTDRRKADSDDGHGASTWDPDTPLYSMFNRFGSGTANLAFAPEMLDDRKPINIPSPRRIEFDKDRYAAIVNKLKAILVDLERSDTYLASLLNVLEATLSFVPSSTDASEVVDVSLFDHLKLTGALGACIWHYLQATGQSDFKSALFDKQDTFYNEKAFLLTTFDVSGIQDFIYTIHSSGAAKMLRARSFYLEMLTEHLIDELLARVGLSRANLNYSGGGHAYLLLPNTESARKSVEQFEREANDWLLENFATRLFIATGSVPLAANDLMRRPNESASQASNRALRYSGLYRELSEQLSAKKLARYSADQLRELNSRDHDGQKGDRECSVCHTVNRTVSADDEPKCSLCQALTAASSQIQSESRRFLLISDGATKGLPLPFGATLTFCSRADADKALQQPQTRRRYAKNKFFAGECLGTGLWVGDYVAQMEFGDYVKRASGIARLGVLRLDVDNLGQAFTHGFMEQGNGKFNTISRTAAFSRMLSLFFRQHINYVLARPKLRPITGDDPARPREATIIYSGGDDVFVVGAWDDVIEFGIELRERFHEFTQGKLTVSAGIGMFPDKYPISVMAREVGDLEDAAKSLPGKNGVALFDREFTFGWDELLSKVIEEKYRHIADYFSGNEERGMAFIYKLLELLAERDDRITKARWVYFLTRMRNPTGDTAPFQQFANRLHQWFQDPTDAKQLKTALHLYIYRTRKEESE
>NZ_CP012506.2|WP_003912014.1|3120583_3121306_-|CRISPR-associated-endoribonuclease-Cas6
MATLGPHLHGVLMESIPADYVQTLHTVPVNPYSQYALARSTTSLEWKISTLTNEARQQIVGPINDAAFAGFRLRASGIATQVTSRSLEQNPLSQFARIFYARPETRKFRVEFLTPTAFKQSGEYVFWPDPRLVFQSLAQKYGAIVDGEEPDPGLIAEFGQSVRLSAFRVASAPFAVGAARVPGFTGSATFTVRGVDTFASYIAALLWFGEFSGCGIKASMGMGAIRVQPLAPREKCVPKP
>NZ_CP012506.2|WP_014584866.1|3121705_3122251_-|DUF1802-family-protein
MTPALKEWSAAVHALLDGRQTVLLRKGGIGEKRFEVAAHEFLLFPTVAHSHAERVRPEHRDLLGPAAADSTDECVLLRAAAKVVAALPVNRPEGLDAIEDLHIWTAESVRADRLDFRPKHKLAVLVVCAIPLAEPVRLARRPEYGGCTSWVQLPVTPTLAAPVHDEAALAEVAARVREAVG
>NZ_CP012506.2|WP_003414409.1|3122522_3123407_-|hypothetical-protein
MAGLTRALVARHALGRAEAYDAALLDVAQDHLLYLLSQTVQFGDNRLVFKGGTSLRKCRLGNVGRFSTDLDFSAPDDEVVLEVCELIDGARVGGFEFGVQSTRGDGRHWQLRVRHTELGEPRIVASVEFARRPLALPSELLAFIQLPIHKAYGFGLPTLPVVAEAEACAEKLARYRRVALARDLYDLNHFASRTIDEPLVRRLWVLKVWGDVVDDRRGTRPLRVEDVLAARSEHDFQPDSIGVLTRPVAMAAWEARVRKRFAFLTDLDADEQRWAACDERHRREVENALAVLRS
>NZ_CP012506.2|WP_003414414.1|3123409_3124297_-|hypothetical-protein
MVSPAGADRRIPTWASRVVSGLARDRPVVVTKEDLTQRLTEAGCGRDPDSAIRELRRIGWLVQLPVKGTWAFIPPGEAAISDPYLPLRSWLARDQNAGFMLAGASAAWHLGYLDRQPDGRIPIWLPPAKRLPDGLASYVSVVRIPWNAADTALLAPRPALLVRRRLDLVAWATGLPALGPEALLVQIATRPASFGPWADLVPHLDDLVADCSDERLERLLSGRPTSAWQRASYLLDSGGEPARGQALLAKRHTEVMPVTRFTTAHSRDRGESVWAPEYQLVDELVVPLLRVIGKA
>NZ_CP012506.2|WP_003910939.1|3124601_3125147_-|DUF1802-family-protein
MTPALKEWSAAVHALLDGRQTVLLRKGGIGEKRFEVAAHEFLLFPTVAHSHAERVRPEHRDLLGPAAADSTDECVLLRAAAKVVAALPVNRPEGLDAIEDLHIWTAESVRADRLDFRPKHRLAVLVVCAIPLAEPVRLARRPEYGGCTSWVQLPVTPTLAAPVHDEAALAEVAARVREAVG
>NZ_CP012506.2|WP_003414489.1|3125143_3125413_-|DUF2277-family-protein
MCRNITELRGLQPPATPVEIAAAARQYVRKVSGITHPSAATAEAFEAAVAEVTATTTRLLDALPPRRQPPKTVPPLRRPDVAARLAGSR

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Crispr_ID: NZ_CP012506_11

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012506_11

3659492-3659610

Unclear

Consensus_repeat	Method
GCCCCTGTGAGTCGAGTGAGCGGAACGAAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP012506_11

>merge|NZ_CP012506|11|3659492-3659610|CRISPRCasFinder
GCCCCTGTGAGTCGAGTGAGCGGAACGAACCTGTGAGTCGAGTGAGCGGAACGAACGAAGTGAGTGACGGGAACGAGACGAACAATCCGGCCCCTGTGAGTCGAGTGAGCGGAACGAAC

>NZ_CP012506|11|7|3659492-3659610|CRISPRCasFinder
GCCCCTGTGAGTCGAGTGAGCGGAACGAAC	CTGTGAGTCGAGTGAGCGGAACGAACGAAGTGAGTGACGGGAACGAGACGAACAATCCG
GCCCCTGTGAGTCGAGTGAGCGGAACGAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012506.2\|WP_003900004.1\|3666102_3667452_-\|L-lysine-6-transaminase	unknown	unknown	gnl\|CDD\|236224
NZ_CP012506.2\|WP_003417156.1\|3662014_3663817_+\|acetyl/propionyl/methylcrotonyl-CoA-carboxylase-subunit-alpha	unknown	unknown	gnl\|CDD\|227111
NZ_CP012506.2\|WP_003417165.1\|3665691_3666069_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012506.2\|WP_003901586.1\|3649240_3650425_+\|CoA-transferase	unknown	unknown	gnl\|CDD\|367110
NZ_CP012506.2\|WP_003906045.1\|3659876_3660545_+\|septum-formation-inhibitor-Maf	unknown	unknown	gnl\|CDD\|178901
NZ_CP012506.2\|WP_003417162.1\|3665243_3665657_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012506.2\|WP_025096322.1\|3652712_3653882_-\|acyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|173847
NZ_CP012506.2\|WP_003899999.1\|3657004_3657805_-\|biotin--[acetyl-CoA-carboxylase]-ligase	unknown	unknown	gnl\|CDD\|223417
NZ_CP012506.2\|WP_003417160.1\|3664608_3665046_-\|anti-sigma-regulatory-factor	unknown	unknown	gnl\|CDD\|225083
NZ_CP012506.2\|WP_003899997.1\|3653906_3654431_-\|5-(carboxyamino)imidazole-ribonucleotide-mutase	unknown	unknown	gnl\|CDD\|178534
NZ_CP012506.2\|WP_003417126.1\|3654427_3655717_-\|5-(carboxyamino)imidazole-ribonucleotide-synthase	unknown	unknown	gnl\|CDD\|273473
NZ_CP012506.2\|WP_003417119.1\|3648471_3649140_-\|cation-transporter	unknown	unknown	gnl\|CDD\|223131
NZ_CP012506.2\|WP_003417179.1\|3667502_3667955_-\|Lrp/AsnC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|214628
NZ_CP012506.2\|WP_003417121.1\|3650429_3652724_+\|carbonic-anhydrase	unknown	unknown	gnl\|CDD\|223732
NZ_CP012506.2\|WP_003417152.1\|3661475_3661907_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225077
NZ_CP012506.2\|WP_003417158.1\|3663826_3664612_-\|RNA-polymerase-sigma-factor-SigF	unknown	unknown	gnl\|CDD\|168831
NZ_CP012506.2\|WP_003899998.1\|3655670_3656489_+\|GtrA-family-protein	unknown	unknown	gnl\|CDD\|225155
NZ_CP012506.2\|WP_003417130.1\|3656443_3656962_-\|PH-domain-containing-protein	unknown	unknown	gnl\|CDD\|367615
NZ_CP012506.2\|WP_003906046.1\|3660585_3661479_+\|sulfurtransferase	unknown	unknown	gnl\|CDD\|225450
NZ_CP012506.2\|WP_003899995.1\|3646318_3648475_+\|manganese-exporting-P-type-ATPase-CtpC	unknown	unknown	gnl\|CDD\|225127

Protein	Function_ID	Function_description	E-value
NZ_CP012506.2\|WP_003900004.1\|3666102_3667452_-\|L-lysine-6-transaminase	gnl\|CDD\|236224	PRK08297, PRK08297, L-lysine aminotransferase; Provisional.	0
NZ_CP012506.2\|WP_003417156.1\|3662014_3663817_+\|acetyl/propionyl/methylcrotonyl-CoA-carboxylase-subunit-alpha	gnl\|CDD\|227111	COG4770, COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid metabolism].	0
NZ_CP012506.2\|WP_003901586.1\|3649240_3650425_+\|CoA-transferase	gnl\|CDD\|367110	pfam02515, CoA_transf_3, CoA-transferase family III. CoA-transferases are found in organisms from all lines of descent. Most of these enzymes belong to two well-known enzyme families, but recent work on unusual biochemical pathways of anaerobic bacteria has revealed the existence of a third family of CoA-transferases. The members of this enzyme family differ in sequence and reaction mechanism from CoA-transferases of the other families. Currently known enzymes of the new family are a formyl-CoA: oxalate CoA-transferase, a succinyl-CoA: (R)-benzylsuccinate CoA-transferase, an (E)-cinnamoyl-CoA: (R)-phenyllactate CoA-transferase, and a butyrobetainyl-CoA: (R)-carnitine CoA-transferase. In addition, a large number of proteins of unknown or differently annotated function from Bacteria, Archaea and Eukarya apparently belong to this enzyme family. Properties and reaction mechanisms of the CoA-transferases of family III are described and compared to those of the previously known CoA-transferases.	4.53796e-144
NZ_CP012506.2\|WP_003906045.1\|3659876_3660545_+\|septum-formation-inhibitor-Maf	gnl\|CDD\|178901	PRK00148, PRK00148, Maf-like protein; Reviewed.	1.61599e-101
NZ_CP012506.2\|WP_025096322.1\|3652712_3653882_-\|acyl-CoA-dehydrogenase	gnl\|CDD\|173847	cd01158, SCAD_SBCAD, Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases. Short chain acyl-CoA dehydrogenase (SCAD). SCAD is a mitochondrial beta-oxidation enzyme. It catalyzes the alpha,beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of SCAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. This subgroup also contains the eukaryotic short/branched chain acyl-CoA dehydrogenase(SBCAD), the bacterial butyryl-CoA dehydorgenase(BCAD) and 2-methylbutyryl-CoA dehydrogenase, which is involved in isoleucine catabolism. These enzymes are homotetramers.	0
NZ_CP012506.2\|WP_003899999.1\|3657004_3657805_-\|biotin--[acetyl-CoA-carboxylase]-ligase	gnl\|CDD\|223417	COG0340, BirA, Biotin-(acetyl-CoA carboxylase) ligase [Coenzyme metabolism].	1.95486e-68
NZ_CP012506.2\|WP_003417160.1\|3664608_3665046_-\|anti-sigma-regulatory-factor	gnl\|CDD\|225083	COG2172, RsbW, Anti-sigma regulatory factor (Ser/Thr protein kinase) [Signal transduction mechanisms].	8.06445e-27
NZ_CP012506.2\|WP_003899997.1\|3653906_3654431_-\|5-(carboxyamino)imidazole-ribonucleotide-mutase	gnl\|CDD\|178534	PLN02948, PLN02948, phosphoribosylaminoimidazole carboxylase.	3.89772e-84
NZ_CP012506.2\|WP_003417126.1\|3654427_3655717_-\|5-(carboxyamino)imidazole-ribonucleotide-synthase	gnl\|CDD\|273473	TIGR01161, N5-carboxyaminoimidazole_ribonucleotide_synthase, phosphoribosylaminoimidazole carboxylase, PurK protein. Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. This model represents PurK, N5-carboxyaminoimidazole ribonucleotide synthetase, which hydrolyzes ATP and converts AIR to N5-CAIR. PurE converts N5-CAIR to CAIR. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP. [Purines, pyrimidines, nucleosides, and nucleotides, Purine ribonucleotide biosynthesis].	4.83866e-168
NZ_CP012506.2\|WP_003417119.1\|3648471_3649140_-\|cation-transporter	gnl\|CDD\|223131	COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism].	9.88116e-14
NZ_CP012506.2\|WP_003417179.1\|3667502_3667955_-\|Lrp/AsnC-family-transcriptional-regulator	gnl\|CDD\|214628	smart00344, HTH_ASNC, helix_turn_helix ASNC type. AsnC: an autogenously regulated activator of asparagine synthetase A transcription in Escherichia coli).	2.51557e-39
NZ_CP012506.2\|WP_003417121.1\|3650429_3652724_+\|carbonic-anhydrase	gnl\|CDD\|223732	COG0659, SUL1, Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism].	1.66696e-123
NZ_CP012506.2\|WP_003417152.1\|3661475_3661907_+\|hypothetical-protein	gnl\|CDD\|225077	COG2166, sufE, Cysteine desulfurase SufE subunit [Posttranslational modification, protein turnover, chaperones].	2.70051e-43
NZ_CP012506.2\|WP_003417158.1\|3663826_3664612_-\|RNA-polymerase-sigma-factor-SigF	gnl\|CDD\|168831	PRK07122, PRK07122, RNA polymerase sigma factor SigF; Reviewed.	1.58212e-166
NZ_CP012506.2\|WP_003899998.1\|3655670_3656489_+\|GtrA-family-protein	gnl\|CDD\|225155	COG2246, COG2246, Predicted membrane protein [Function unknown].	5.34469e-32
NZ_CP012506.2\|WP_003417130.1\|3656443_3656962_-\|PH-domain-containing-protein	gnl\|CDD\|367615	pfam03703, bPH_2, Bacterial PH domain. Domain found in uncharacterized family of membrane proteins. 1-3 copies found in each protein, with each copy flanked by transmembrane helices. Members of this family have a PH domain like structure.	1.01198e-16
NZ_CP012506.2\|WP_003906046.1\|3660585_3661479_+\|sulfurtransferase	gnl\|CDD\|225450	COG2897, SseA, Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism].	2.06494e-107
NZ_CP012506.2\|WP_003899995.1\|3646318_3648475_+\|manganese-exporting-P-type-ATPase-CtpC	gnl\|CDD\|225127	COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism].	0

>NZ_CP012506.2|WP_003899999.1|3657004_3657805_-|biotin--[acetyl-CoA-carboxylase]-ligase
MTDRDRLRPPLDERSLRDQLIGAGSGWRQLDVVAQTGSTNADLLARAASGADIDGVVLIAEHQTAGRGRHGRGWAATARAQIILSVGVRVVDVPVQAWGWLSLAAGLAVLDSVAPLIAVPPAETGLKWPNDVLARGGKLAGILAEVAQPFVVLGVGLNVTQAPEEVDPDATSLLDLGVAAPDRNRIASRLLRELEARIIQWRNANPQLAADYRARSLTIGSRVRVELPGGQDVVGIARDIDDQGRLCLDVGGRTVVVSAGDVVHLR
>NZ_CP012506.2|WP_003417130.1|3656443_3656962_-|PH-domain-containing-protein
MSYPENVLAAGEQVVLHRHPHWNRLIWPVVVLVLLTGLAAFGSGFVNSTPWQQIAKNVIHAVIWGIWLVIVGWLTLWPFLSWLTTHFVVTNRRVMFRHGVLTRSGIDIPLARINSVEFRDRIFERIFRTGTLIIESASQDPLEFYNIPRLREVHALLYHEVFDTLGSDESPS
>NZ_CP012506.2|WP_003899998.1|3655670_3656489_+|GtrA-family-protein
MNEVTAGVRELATAIMVSRHLTGVLAGHGSQTVTYHFASILCSSVHSLVVSFADATIARLPGVVQPYAQRHHELIKFAIVGGTTFIIDTAIFYTLKLTVLEPKPVTAKVIAGIVAVIASYVLNREWSFRDRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSYILQLRVPTVSLTMENIADFISAYIIGNLLQMAFRFWAFRRWVFPDEFARNPDKALESALTAGGIAEVFEDVLEGGFEDGNVTLLRAWRNRANRFAQLGDSSEPRVSKTS
>NZ_CP012506.2|WP_003417126.1|3654427_3655717_-|5-(carboxyamino)imidazole-ribonucleotide-synthase
MMAVASSRTPAVTSFIAPLVAMVGGGQLARMTHQAAIALGQNLRVLVTSADDPAAQVTPNVVIGSHTDLAALRRVAAGADVLTFDHEHVPNELLEKLVADGVNVAPSPQALVHAQDKLVMRQRLAAAGVAVPRYAGIKDPDEIDVFAARVDAPIVVKAVRGGYDGRGVRMARDVADARDFARECLADGVAVLVEERVDLRRELSALVARSPFGQGAAWPVVQTVQRDGTCVLVIAPAPALPDDLATAAQRLALQLADELGVVGVLAVELFETTDGALLVNELAMRPHNSGHWTIDGARTSQFEQHLRAVLDYPLGDSDAVVPVTVMANVLGAAQPPAMSVDERLHHLFARMPDARVHLYGKAERPGRKVGHINFLGSDVAQLCERAELAAHWLSHGRWTDGWDPHRASDDAVGVPPACGGRSDEEERRL
>NZ_CP012506.2|WP_003899997.1|3653906_3654431_-|5-(carboxyamino)imidazole-ribonucleotide-mutase
MTPAGERPRVGVIMGSDSDWPVMADAAAALAEFDIPAEVRVVSAHRTPEAMFSYARGAAERGLEVIIAGAGGAAHLPGMVAAATPLPVIGVPVPLGRLDGLDSLLSIVQMPAGVPVATVSIGGAGNAGLLAVRMLGAANPQLRARIVAFQDRLADVVAAKDAELQRLAGKLTRD
>NZ_CP012506.2|WP_025096322.1|3652712_3653882_-|acyl-CoA-dehydrogenase
MVGWAGNPSFDLFKLPEEHDEMRSAIRALAEKEIAPHAAEVDEKARFPEEALVALNSSGFNAVHIPEEYGGQGADSVATCIVIEEVARVDASASLIPAVNKLGTMGLILRSSEELKKQVLPALAAEGAMASYALSEREAGSDAASMRTRAKADGDHWILNGAKCWITNGGKSTWYTVMAVTDPDRGANGISAFMVHKDDEGFTVGPKERKLGIKGSPTTELYFENCRIPGDRIIGEPGTGFKTALATLDHTRPTIGAQAVGIAQGALDAAIAYTKDRKQFGESISTFQAVQFMLADMAMKVEAARLMVYSAAARAERGEPDLGFISAASKCFASDVAMEVTTDAVQLFGGAGYTTDFPVERFMRDAKITQIYEGTNQIQRVVMSRALLR
>NZ_CP012506.2|WP_003417121.1|3650429_3652724_+|carbonic-anhydrase
MTIPRSQHMSTAVNSCTEAPASRSQWMLANLRHDVPASLVVFLVALPLSLGIAIASGAPIIAGVIAAVVGGIVAGAVGGSPVQVSGPAAGLTVVVAELIDELGWPMLCLMTIAAGALQIVFGLSRMARAALAIAPVVVHAMLAGIGITIALQQIHVLLGGTSHSSAWRNIVALPDGILHHELHEVIVGGTVIAILLMWSKLPAKVRIIPGPLVAIAGATVLALLPVLQTERIDLQGNFFDAIGLPKLAEMSPGGQPWSHEISAIALGVLTIALIASVESLLSAVGVDKLHHGPRTDFNREMVGQGSANVVSGLLGGLPITGVIVRSSANVAAGARTRMSTILHGVWILLFASLFTNLVELIPKAALAGLLIVIGAQLVKLAHIKLAWRTGNFVIYAITIVCVVFLNLLEGVAIGLVVAIVFLLVRVVRAPVEVKPVGGEQSKRWRVDIDGTLSFLLLPRLTTVLSKLPEGSEVTLNLNADYIDDSVSEAISDWRRAHETRGGVVAIVETSPAKLHHAHARPPKRHFASDPIGLVPWRSARGKDRGSASVLDRIDEYHRNGAAVLHPHIAGLTDSQDPYELFLTCADSRILPNVITASGPGDLYTVRNLGNLVPTDPDDRSVDAALDFAVNQLGVSSVVVCGHSSCAAMTALLEDDPANTTTPMMRWLENAHDSLVVFRNHHPARRSAESAGYPEADQLSIVNVAVQVERLTRHPILATAVAAADLQVIGIFFDISTARVYEVGPNGIICPDEPADRPVDHESAQ
>NZ_CP012506.2|WP_003901586.1|3649240_3650425_+|CoA-transferase
MPTSNPAKPLDGFRVLDFTQNVAGPLAGQVLVDLGAEVIKVEAPGGEAARQITSVLPGRPPLATYFLPNNRGKKSVTVDLTTEQAKQQMLRLADTADVVLEAFRPGTMEKLGLGPDDLRSRNPNLIYARLTAYGGNGPHGSRPGIDLVVAAEAGMTTGMPTPEGKPQIIPFQLVDNASGHMLAQAVLAALLHRERNGVADVVQVAMYDVAVGLQANQLMMHLNRAASDQPKPEPAPKAKRRKGVGFATQPSDAFRTADGYIVISAYVPKHWQKLCYLIGRPDLVEDQRFAEQRSRSINYAELTAELELALASKTATEWVQLLQANGLMACLAHTWKQVVDTPLFAENDLTLEVGRGADTITVIRTPARYASFRAVVTDPPPTAGEHNAVFLARP
>NZ_CP012506.2|WP_003417119.1|3648471_3649140_-|cation-transporter
METTTEHRDESTLDSPVSVAREAEWQRNVRWARWLAWVSLAVLLTEGAVGLWQGIAVGSVALTGWALGGGSEGLASAMVLWRFTGDRTWSATAEHRAQRGVAVSFWLTAPYLVAESIRHLAGEHRAETSVIGIGLTAIALLLMPVLGWANHRVGERLGSGATAGEGTQNYLCAAQAAAVLLGLAITAVWSNGWWIDPAIGLAIAGIAVWQGIRTWRGHGCGC
>NZ_CP012506.2|WP_003899995.1|3646318_3648475_+|manganese-exporting-P-type-ATPase-CtpC
MTLEVVSDAAGRMRVKVDWVRCDSRRAVAVEEAVAKQNGVRVVHAYPRTGSVVVWYSPRRADRAAVLAAIKGAAHVAAELIPARAPHSAEIRNTDVLRMVIGGVALALLGVRRYVFARPPLLGTTGRTVATGVTIFTGYPFLRGALRSLRSGKAGTDALVSAATVASLILRENVVALTVLWLLNIGEYLQDLTLRRTRRAISELLRGNQDTAWVRLTDPSAGSDAATEIQVPIDTVQIGDEVVVHEHVAIPVDGEVVDGEAIVNQSAITGENLPVSVVVGTRVHAGSVVVRGRVVVRAHAVGNQTTIGRIISRVEEAQLDRAPIQTVGENFSRRFVPTSFIVSAIALLITGDVRRAMTMLLIACPCAVGLSTPTAISAAIGNGARRGILIKGGSHLEQAGRVDAIVFDKTGTLTVGRPVVTNIVAMHKDWEPEQVLAYAASSEIHSRHPLAEAVIRSTEERRISIPPHEECEVLVGLGMRTWADGRTLLLGSPSLLRAEKVRVSKKASEWVDKLRRQAETPLLLAVDGTLVGLISLRDEVRPEAAQVLTKLRANGIRRIVMLTGDHPEIAQVVADELGIDEWRAEVMPEDKLAAVRELQDDGYVVGMVGDGINDAPALAAADIGIAMGLAGTDVAVETADVALANDDLHRLLDVGDLGERAVDVIRQNYGMSIAVNAAGLLIGAGGALSPVLAAILHNASSVAVVANSSRLIRYRLDR
>NZ_CP012506.2|WP_003906045.1|3659876_3660545_+|septum-formation-inhibitor-Maf
MTRLVLGSASPGRLKVLRDAGIEPLVIASHVDEDVVIAALGPDAVPSDVVCVLAAAKAAQVATTLTGTQRIVAADCVVVDCDSMLYIEGRLLGKPASIDEAREQWRSMAGRAGQLYTGHGVIRLQDNKTVYRAAETAITTVYFGTPSASDLEAYLASGESLRVAGGFTLDGLGGWFIDGVQGNPSNVIGLSLPLLRSLVQRCGLSVAALWAGNAGGPAHKQQ
>NZ_CP012506.2|WP_003906046.1|3660585_3661479_+|sulfurtransferase
MPLPADPSPTLSAYAHPERLVTADWLSAHMGAPGLAIVESDEDVLLYDVGHIPGAVKIDWHTDLNDPRVRDYINGEQFAELMDRKGIARDDTVVIYGDKSNWWAAYALWVFTLFGHADVRLLNGGRDLWLAERRETTLDVPTKTCTGYPVVQRNDAPIRAFRDDVLAILGAQPLIDVRSPEEYTGKRTHMPDYPEEGALRAGHIPTAVHIPWGKAADESGRFRSREELERLYDFINPDDQTVVYCRIGERSSHTWFVLTHLLGKADVRNYDGSWTKWGNAVRVPIVAGEEPGVVPVV
>NZ_CP012506.2|WP_003417152.1|3661475_3661907_+|hypothetical-protein
MTAPASLPAPLAEVVSDFAEVQGQDKLRLLLEFANELPALPSHLAESAMEPVPECQSPLFLHVDASDPNRVRLHFSAPAEAPTTRGFASILAAGLDEQPAADILAVPEDFYTELGLAALISPLRLRGMSAMLARIKRRLREAD
>NZ_CP012506.2|WP_003417156.1|3662014_3663817_+|acetyl/propionyl/methylcrotonyl-CoA-carboxylase-subunit-alpha
MASHAGSRIARISKVLVANRGEIAVRVIRAARDAGLPSVAVYAEPDAESPHVRLADEAFALGGQTSAESYLDFAKILDAAAKSGANAIHPGYGFLAENADFAQAVIDAGLIWIGPSPQSIRDLGDKVTARHIAARAQAPLVPGTPDPVKGADEVVAFAEEYGLPIAIKAAHGGGGKGMKVARTIDEIPELYESAVREATAAFGRGECYVERYLDKPRHVEAQVIADQHGNVVVAGTRDCSLQRRYQKLVEEAPAPFLTDFQRKEIHDSAKRICKEAHYHGAGTVEYLVGQDGLISFLEVNTRLQVEHPVTEETAGIDLVLQQFRIANGEKLDITEDPTPRGHAIEFRINGEDAGRNFLPAPGPVTKFHPPSGPGVRVDSGVETGSVIGGQFDSMLAKLIVHGADRAEALARARRALNEFGVEGLATVIPFHRAVVSDPAFIGDANGFSVHTRWIETEWNNTIEPFTDGEPLDEDARPRQKVVVEIDGRRVEVSLPADLALSNGGGCDPVGVIRRKPKPRKRGAHTGAAASGDAVTAPMQGTVVKFAVEEGQEVVAGDLVVVLEAMKMENPVTAHKDGTITGLAVEAGAAITQGTVLAEIK
>NZ_CP012506.2|WP_003417158.1|3663826_3664612_-|RNA-polymerase-sigma-factor-SigF
MTARAAGGSASRANEYADVPEMFRELVGLPAGSPEFQRHRDKIVQRCLPLADHIARRFEGRGEPRDDLIQVARVGLVNAAVRFDVKTGSDFVSFAVPTIMGEVRRHFRDNSWSVKVPRRLKELHLRLGTATADLSQRLGRAPSASELAAELGMDRAEVIEGLLAGSSYHTLSIDSGGGSDDDARAITDTLGDVDAGLDQIENREVLRPLLEALPERERTVLVLRFFDSMTQTQIAERVGISQMHVSRLLAKSLARLRDQLE
>NZ_CP012506.2|WP_003417160.1|3664608_3665046_-|anti-sigma-regulatory-factor
MADSDLPTKGRQRGVRAVELNVAARLENLALLRTLVGAIGTFEDLDFDAVADLRLAVDEVCTRLIRSALPDATLRLVVDPRKDEVVVEASAACDTHDVVAPGSFSWHVLTALADDVQTFHDGRQPDVAGSVFGITLTARRAASSR
>NZ_CP012506.2|WP_003417162.1|3665243_3665657_-|hypothetical-protein
MGQIPPQPVRRVLPLMVVPGNGQKWRNRTETEEAMGDTYRDPVDHLRTTRPLAGESLIDVVHWPGYLLIVAGVVGGVGALAAFGTGHHAEGMTFGVVAIVVTVVGLAWLAFEHRRIRKIADRWYTEHPEVRRQRLAG
>NZ_CP012506.2|WP_003417165.1|3665691_3666069_-|hypothetical-protein
MHEVGGPSRGDRLGRDDSEVHSAIRFAVVAAVVGVGFLIMGALLVSTCSGVDTAACGPPQRILLALGGPLILCAAGLWAFLRTYRVWRAEGTWWGWHGAGWFLLTLMVLTLCIGVPPIAGPVMAP
>NZ_CP012506.2|WP_003900004.1|3666102_3667452_-|L-lysine-6-transaminase
MAAVVKSVALAGRPTTPDRVHEVLGRSMLVDGLDIVLDLTRSGGSYLVDAITGRRYLDMFTFVASSALGMNPPALVDDREFHAELMQAALNKPSNSDVYSVAMARFVETFARVLGDPALPHLFFVEGGALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDAPYMRPGLDEPAMAALEAEALRQARAAFETRPHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGTAWAYQQLDVAPDIVAFGKKTQVCGVMAGRRVDEVADNVFAVPSRLNSTWGGNLTDMVRARRILEVIEAEGLFERAVQHGKYLRARLDELAADFPAVVLDPRGRGLMCAFSLPTTADRDELIRQLWQRAVIVLPAGADTVRFRPPLTVSTAEIDAAIAAVRSALPVVT
>NZ_CP012506.2|WP_003417179.1|3667502_3667955_-|Lrp/AsnC-family-transcriptional-regulator
MNEALDDIDRILVRELAADGRATLSELATRAGLSVSAVQSRVRRLESRGVVQGYSARINPEAVGHLLSAFVAITPLDPSQPDDAPARLEHIEEVESCYSVAGEESYVLLVRVASARALEDLLQRIRTTANVRTRSTIILNTFYSDRQHIP

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Crispr_ID: NZ_CP012506_12

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012506_12

3739929-3740505

Orphan

Consensus_repeat	Method
GCCGCCGTTGCCNCCGNNGCCGCCG	CRT

7 spacers

The CRISPR arrays of NZ_CP012506_12

>merge|NZ_CP012506|12|3739929-3740505|CRT
GCCGCCGTTGCCGCCGGCACCGCCGGCGCCCTGGTTGATGGCCAAGGTCACGTCACCGGCGGCGCCGCCGCCGCCATTACCGGCGGCGCCGCCGTTGCCGCCGGCACCGCCGTTGCCGGCCTTAGCGAACGTGGCGAAGGCGTCACCACCCTTGCCGCCGATGCCGCCGTTGCCGCCGTTGCCGCCCTGTCCGCCATTCGCGCCATTGGCGGACGCGGAGAAGTCTTGGCCGTTGGCTCCGGCGCCCCCGTTGCCGCCCTTGCCGCCGTCCCCGCCCGTGCCGGCCGCCGATCCGCCGTTGCCGCCGATGCCGCCGTTGCCGCCGTTGCCGCCGTTGAGGGCAAGGCCGGTGCCGGCGACGCCATTTCCGCCGGCACCACCCGCACCGCCGTTACCGACCGACCCGCCATGGCCGCCGTTACCACCGGCGCCGCCGTTTTCTCCCGCGACGGTGGGGGTGGCGCCGGCACCTCCGTTGCCACCGTTGCCGCCGCTGGTGGGCGCGGTGCCGTTCGCCCCGGCCGAACCGTTCAGGGCCGGGTTCGCGCTAACACCGCCGGCCCCACCCTTGCCGCCA

>NZ_CP012506|12|5|3739929-3740505|CRT
GCCGCCGTTGCCGCCGGCACCGCCG	GCGCCCTGGTTGATGGCCAAGGTCACGTCACCGGCGGCGCCGCCGCCGCCATTACCGGCGGC
GCCGCCGTTGCCGCCGGCACCGCCG	TTGCCGGCCTTAGCGAACGTGGCGAAGGCGTCACCACCCTTGCCGCCGAT
GCCGCCGTTGCCGCCGTTGCCGCCC	TGTCCGCCATTCGCGCCATTGGCGGACGCGGAGAAGTCTTGGCCGTTGGCTCCGGC
GCCCCCGTTGCCGCCCTTGCCGCCG	TCCCCGCCCGTGCCGGCCGCCGATCCGCCGTTGCCGCCGAT
GCCGCCGTTGCCGCCGTTGCCGCCG	TTGAGGGCAAGGCCGGTGCCGGCGACGCCATTTCCGCCGGCACCACCCGCACCGCCGTTACCGACCGACCCGCCATG
GCCGCCGTTACCACCGGCGCCGCCG	TTTTCTCCCGCGACGGTGGGGGTGGCGCCGGC
ACCTCCGTTGCCACCGTTGCCGCCG	CTGGTGGGCGCGGTGCCGTTCGCCCCGGCCGAACCGTTCAGGGCCGGGTTCGCGCTAAC
ACCGCCGGCCCCACCCTTGCCGCCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012506.2\|WP_003900028.1\|3725642_3726992_+\|bifunctional-o-acetylhomoserine/o-acetylserine-sulfhydrylase	unknown	unknown	gnl\|CDD\|236105
NZ_CP012506.2\|WP_003417435.1\|3721246_3722116_-\|inner-membrane-protein-YhjD	unknown	unknown	gnl\|CDD\|188082
NZ_CP012506.2\|WP_003417741.1\|3768141_3768402_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012506.2\|WP_003900026.1\|3720772_3721213_+\|heavy-metal-responsive-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133398
NZ_CP012506.2\|WP_157132559.1\|3767896_3768115_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366708
NZ_CP012506.2\|WP_031664658.1\|3743120_3752594_-\|PPE-family-protein	unknown	unknown	gnl\|CDD\|366325
NZ_CP012506.2\|WP_003417452.1\|3724130_3725360_-\|NADP-dependent-isocitrate-dehydrogenase	unknown	unknown	gnl\|CDD\|236226
NZ_CP012506.2\|WP_003417421.1\|3719452_3720298_-\|DUF732-domain-containing-protein	unknown	unknown	gnl\|CDD\|368380
NZ_CP012506.2\|WP_009940431.1\|3723431_3724064_+\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|184875
NZ_CP012506.2\|WP_003417461.1\|3728139_3728871_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|369777
NZ_CP012506.2\|WP_003417739.1\|3767627_3767999_-\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223354
NZ_CP012506.2\|WP_003417619.1\|3742607_3742865_-\|DUF3017-domain-containing-protein	unknown	unknown	gnl\|CDD\|378602
NZ_CP012506.2\|WP_003417745.1\|3768516_3768906_+\|DUF732-domain-containing-protein	unknown	unknown	gnl\|CDD\|368380
NZ_CP012506.2\|WP_003417440.1\|3722136_3723147_-\|tryptophan--tRNA-ligase	unknown	unknown	gnl\|CDD\|234866
NZ_CP012506.2\|WP_003417458.1\|3727003_3728143_+\|homoserine-O-acetyltransferase	unknown	unknown	gnl\|CDD\|234678
NZ_CP012506.2\|WP_003911006.1\|3753702_3754443_-\|transposase	unknown	unknown	gnl\|CDD\|376574
NZ_CP012506.2\|WP_025234886.1\|3728879_3736493_-\|PPE-family-protein	unknown	unknown	gnl\|CDD\|366325
NZ_CP012506.2\|WP_049961743.1\|3753219_3753666_+\|transposase	unknown	unknown	gnl\|CDD\|376564
NZ_CP012506.2\|WP_003417738.1\|3766751_3767546_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|369658
NZ_CP012506.2\|WP_009938650.1\|3754737_3755025_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP012506.2\|WP_003900028.1\|3725642_3726992_+\|bifunctional-o-acetylhomoserine/o-acetylserine-sulfhydrylase	gnl\|CDD\|236105	PRK07812, PRK07812, O-acetylhomoserine aminocarboxypropyltransferase; Validated.	0
NZ_CP012506.2\|WP_003417435.1\|3721246_3722116_-\|inner-membrane-protein-YhjD	gnl\|CDD\|188082	TIGR00766, Uncharacterized_protein_Dda3937_02003, inner membrane protein YhjD. This family, including YhjD in E. coli, is a conserved inner membrane protein homologous YihY, which in turn was incorrectly assigned to be ribonuclease BN. This, any suggestion this family is similar to ribonucleases should be removed. [Transcription, Degradation of RNA].	3.67774e-123
NZ_CP012506.2\|WP_003900026.1\|3720772_3721213_+\|heavy-metal-responsive-transcriptional-regulator	gnl\|CDD\|133398	cd04770, HTH_HMRTR, Helix-Turn-Helix DNA binding domain of Heavy Metal Resistance transcription regulators. Helix-turn-helix (HTH) heavy metal resistance transcription regulators (HMRTR): MerR1 (mercury), CueR (copper), CadR (cadmium), PbrR (lead), ZntR (zinc), and other related proteins. These transcription regulators mediate responses to heavy metal stress in eubacteria. They belong to the MerR superfamily of transcription regulators that promote transcription of various stress regulons by reconfiguring the operator sequence located between the -35 and -10 promoter elements. A typical MerR regulator is comprised of two distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their N-terminal domains are homologous and contain a DNA-binding winged HTH motif, while the C-terminal domains are often dissimilar and bind specific coactivator molecules such as metal ions, drugs, and organic substrates.	2.31191e-56
NZ_CP012506.2\|WP_157132559.1\|3767896_3768115_-\|hypothetical-protein	gnl\|CDD\|366708	pfam01565, FAD_binding_4, FAD binding domain. This family consists of various enzymes that use FAD as a co-factor, most of the enzymes are similar to oxygen oxidoreductase. One of the enzymes Vanillyl-alcohol oxidase (VAO) has a solved structure, the alignment includes the FAD binding site, called the PP-loop, between residues 99-110. The FAD molecule is covalently bound in the known structure, however the residue that links to the FAD is not in the alignment. VAO catalyzes the oxidation of a wide variety of substrates, ranging form aromatic amines to 4-alkylphenols. Other members of this family include D-lactate dehydrogenase, this enzyme catalyzes the conversion of D-lactate to pyruvate using FAD as a co-factor; mitomycin radical oxidase, this enzyme oxidizes the reduced form of mitomycins and is involved in mitomycin resistance. This family includes MurB an UDP-N-acetylenolpyruvoylglucosamine reductase enzyme EC:1.1.1.158. This enzyme is involved in the biosynthesis of peptidoglycan.	3.12703e-05
NZ_CP012506.2\|WP_031664658.1\|3743120_3752594_-\|PPE-family-protein	gnl\|CDD\|366325	pfam00823, PPE, PPE family. This family named after a PPE motif near to the amino terminus of the domain. The PPE family of proteins all contain an amino-terminal region of about 180 amino acids. The carboxyl terminus of this family are variable, and on the basis of this region fall into at least three groups. The MPTR subgroup has tandem copies of a motif NXGXGNXG. The second subgroup contains a conserved motif at about position 350. The third group are only related in the amino terminal region. The function of these proteins is uncertain but it has been suggested that they may be related to antigenic variation of Mycobacterium tuberculosis.	1.13673e-78
NZ_CP012506.2\|WP_003417452.1\|3724130_3725360_-\|NADP-dependent-isocitrate-dehydrogenase	gnl\|CDD\|236226	PRK08299, PRK08299, NADP-dependent isocitrate dehydrogenase.	0
NZ_CP012506.2\|WP_003417421.1\|3719452_3720298_-\|DUF732-domain-containing-protein	gnl\|CDD\|368380	pfam05305, DUF732, Protein of unknown function (DUF732). This family consists of several uncharacterized Mycobacterium tuberculosis and leprae proteins of unknown function.	8.32313e-18
NZ_CP012506.2\|WP_009940431.1\|3723431_3724064_+\|alpha/beta-fold-hydrolase	gnl\|CDD\|184875	PRK14875, PRK14875, acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional.	1.23792e-15
NZ_CP012506.2\|WP_003417461.1\|3728139_3728871_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|369777	pfam08241, Methyltransf_11, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	1.03104e-26
NZ_CP012506.2\|WP_003417739.1\|3767627_3767999_-\|FAD-binding-oxidoreductase	gnl\|CDD\|223354	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion].	7.3689e-14
NZ_CP012506.2\|WP_003417619.1\|3742607_3742865_-\|DUF3017-domain-containing-protein	gnl\|CDD\|378602	pfam11222, DUF3017, Protein of unknown function (DUF3017). This bacterial family of proteins with unknown function appear to be restricted to Actinobacteria.	3.92596e-11
NZ_CP012506.2\|WP_003417440.1\|3722136_3723147_-\|tryptophan--tRNA-ligase	gnl\|CDD\|234866	PRK00927, PRK00927, tryptophanyl-tRNA synthetase; Reviewed.	0
NZ_CP012506.2\|WP_003417458.1\|3727003_3728143_+\|homoserine-O-acetyltransferase	gnl\|CDD\|234678	PRK00175, metX, homoserine O-acetyltransferase; Provisional.	0
NZ_CP012506.2\|WP_003911006.1\|3753702_3754443_-\|transposase	gnl\|CDD\|376574	pfam01610, DDE_Tnp_ISL3, Transposase. Transposase proteins are necessary for efficient DNA transposition. Contains transposases for IS204, IS1001, IS1096 and IS1165.	1.74021e-20
NZ_CP012506.2\|WP_025234886.1\|3728879_3736493_-\|PPE-family-protein	gnl\|CDD\|366325	pfam00823, PPE, PPE family. This family named after a PPE motif near to the amino terminus of the domain. The PPE family of proteins all contain an amino-terminal region of about 180 amino acids. The carboxyl terminus of this family are variable, and on the basis of this region fall into at least three groups. The MPTR subgroup has tandem copies of a motif NXGXGNXG. The second subgroup contains a conserved motif at about position 350. The third group are only related in the amino terminal region. The function of these proteins is uncertain but it has been suggested that they may be related to antigenic variation of Mycobacterium tuberculosis.	7.94465e-85
NZ_CP012506.2\|WP_049961743.1\|3753219_3753666_+\|transposase	gnl\|CDD\|376564	pfam01548, DEDD_Tnp_IS110, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family includes an amino-terminal region of the pilin gene inverting protein (PIVML) and of members of the IS111A/IS1328/IS1533 family of transposases. The C-terminus is represented by family pfam02371.	3.45693e-11
NZ_CP012506.2\|WP_003417745.1\|3768516_3768906_+\|DUF732-domain-containing-protein	gnl\|CDD\|368380	pfam05305, DUF732, Protein of unknown function (DUF732). This family consists of several uncharacterized Mycobacterium tuberculosis and leprae proteins of unknown function.	4.49035e-23
NZ_CP012506.2\|WP_003417738.1\|3766751_3767546_-\|hypothetical-protein	gnl\|CDD\|369658	pfam08031, BBE, Berberine and berberine like. This domain is found in the berberine bridge and berberine bridge- like enzymes which are involved in the biosynthesis of numerous isoquinoline alkaloids. They catalyze the transformation of the N-methyl group of (S)-reticuline into the C-8 berberine bridge carbon of (S)-scoulerine.	2.38492e-05

>NZ_CP012506.2|WP_025234886.1|3728879_3736493_-|PPE-family-protein
MSFVVMPPEINSLLIYTGAGPGPLLAAAAAWDELAAELGSAAAAFGSVTSGLVGGIWQGPSSVAMAAAAAPYAGWLSAAAASAESAAGQARAVVGVFEAALAATVDPFVIAANRSRLVSLALSNLFGQNTPAIAAAEFDYELMWAQDVAAMLGYHTGASAAAEALAPFGSPLASLAAAAEPAKSLAVNLGLANVGLFNAGSGNVGSYNVGAGNVGSYNVGGGNIGGNNVGLGNVGWGNFGLGNSGLTPGLMGLGNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFISGNYSNGVLWRGDYQGLLGFSSGANVLPVIPLSLDINGGVGAITIEPIHILPDIPININETLYLGPLVVPPINVPAISLGVGIPNISIGPIKINPITLWPAQNFNQTITLAWPVSSITIPQIQQVALSPSPIPTTLIGPIHINTGFSIPVTFSYSTPALTLFPVGLSIPTGGPLTLTLGVTAGTEAFTIPGFSIPEQPLPLAINVIGHINALSTPAITIDNIPLNLHAIGGVGPVDIVGGNVPASPGFGNSTTAPSSGFFNTGAGGVSGFGNVGAHTSGWFNQSTQAMQVLPGTVSGYFNSGTLMSGIGNVGTQLSGMLSGGALGGNNFGLGNIGFDNVGFGNAGSSNFGLANMGIGNIGLANTGNGNIGIGLSGDNLTGFGGFNSGSENVGLFNSGTGNVGFFNSGTGNLGVFNSGSHNTGFFLTGNNINVLAPFTPGTLFTISEIPIDLQVIGGIGPIHVQPIDIPAFDIQITGGFIGIREFTLPEITIPAIPIHVTGTVGLEGFHVNPAFVLFGQTAMAEITADPVVLPDPFITIDHYGPPLGPPGAKFPSGSFYLSISDLQINGPIIGSYGGPGTIPGPFGATFNLSTSSLALFPAGLTVPDQTPVTVNLTGGLDSITLFPGGLAFPENPVVSLTNFSVGTGGFTVFPQGFTVDRIPVDLHTTLSIGPFPFRWDYIPPTPANGPIPAVPGGFGLTSGLFPFHFTLNGGIGPISIPTTTVVDALNPLLTVTGNLEVGPFTVPDIPIPAINFGLDGNVNVSFNAPATTLLSGLGITGSIDISGIQITNIQTQPAQLFMSVGQTLFLFDFRDGIELNPIVIPGSSIPITMAGLSIPLPTVSESIPLNFSFGSPASTVKSMILHEILPIDVSINLEDAVFIPATVLPAIPLNVDVTIPVGPINIPIITEPGSGNSTTTTSDPFSGLAVPGLGVGLLGLFDGSIANNLISGFNSAVGIVGPNVGLSNLGGGNVGLGNVGDFNLGAGNVGGFNVGGGNIGGNNVGLGNVGFGNVGLANSGLTPGLMGLGNIGFGNAGSYNFGLANMGVGNIGFANTGSGNIGIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFISGNYSNGAFWRGDYQGLLDFSFPVGPLIPQTHLVHLRETVNLGPIHIDPIHVHIPPLLDIDQTIDLGSFTVAPITVAPIALDYHETFDLGPLVIFPPMNIPATVIESFSTAPGGPAPPPFVIPATSNVFISTVDFATGNNVIGPFSGALAPTTIQLGASGPSFSVLNLSIPPIHIPGLTIPSVPLRIDVDGGIPGFTLFPDGLTFPKIPVHVDAFAGIPDFTIFPNGYTIDPIPLQLNLDLTLGPVHILIDLPAVPGFGNTTGAPSSGFFNSGAGGVSGFGNVGAMVSGGWNQAPSALLGGGSGVFNAGTLHSGVLNFGSGMSGLFNTSVLGLGAPALVSGLGSVGQQLSGLLASGTALHQGLVLNFGLADVGLGNVGLGNVGDFNLGAGNVGGFNVGGGNIGGNNVGLGNVGWGNFGLGNSGLTPGLMGLGNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAFWRGDYQGLLGFSYTSTIIPEFTVANIHASGGAGPIIVPSIQFPAIPLDLSATGHIGGFTIPPVSISPITVRIDPVFDLGPITVQDITIPALGLDPATGVTVGPIFSSGSIIDPFSLTLLGFINVNVPAIQTAPSEILPFTVLLSSLGVTHLTPEITIPGFHIPVDPIHVELPLSVTIGPFVSPEITIPQLPLGLALSGATPAFAFPLEITIDRIPVVLDVNALLGPINAGLVIPPVPGFGNTTAVPSSGFFNIGGGGGLSGFHNLGAGMSGVLNAISDPLLGSASGFANFGTQLSGILNRGADISGVYNTGALGLITSALVSGFGNVGQQLAGLIYTGTGP
>NZ_CP012506.2|WP_003417461.1|3728139_3728871_+|class-I-SAM-dependent-methyltransferase
MTCSRRDMSLSFGSAVGAYERGRPSYPPEAIDWLLPAAARRVLDLGAGTGKLTTRLVERGLDVVAVDPIPEMLDVLRAALPQTVALLGTAEEIPLDDNSVDAVLVAQAWHWVDPARAIPEVARVLRPGGRLGLVWNTRDERLGWVRELGEIIGRDGDPVRDRVTLPEPFTTVQRHQVEWTNYLTPQALIDLVASRSYCITSPAQVRTKTLDRVRQLLATHPALANSNGLALPYVTVCVRATLA
>NZ_CP012506.2|WP_003417458.1|3727003_3728143_+|homoserine-O-acetyltransferase
MTISDVPTQTLPAEGEIGLIDVGSLQLESGAVIDDVCIAVQRWGKLSPARDNVVVVLHALTGDSHITGPAGPGHPTPGWWDGVAGPGAPIDTTRWCAVATNVLGGCRGSTGPSSLARDGKPWGSRFPLISIRDQVQADVAALAALGITEVAAVVGGSMGGARALEWVVGYPDRVRAGLLLAVGARATADQIGTQTTQIAAIKADPDWQSGDYHETGRAPDAGLRLARRFAHLTYRGEIELDTRFANHNQGNEDPTAGGRYAVQSYLEHQGDKLLSRFDAGSYVILTEALNSHDVGRGRGGVSAALRACPVPVVVGGITSDRLYPLRLQQELADLLPGCAGLRVVESVYGHDGFLVETEAVGELIRQTLGLADREGACRR
>NZ_CP012506.2|WP_003900028.1|3725642_3726992_+|bifunctional-o-acetylhomoserine/o-acetylserine-sulfhydrylase
MSADSNSTDADPTAHWSFETKQIHAGQHPDPTTNARALPIYATTSYTFDDTAHAAALFGLEIPGNIYTRIGNPTTDVVEQRIAALEGGVAALFLSSGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYSLAKLGIEVSFVDDPDDLDTWQAAVRPNTKAFFAETISNPQIDLLDTPAVSEVAHRNGVPLIVDNTIATPYLIQPLAQGADIVVHSATKYLGGHGAAIAGVIVDGGNFDWTQGRFPGFTTPDPSYHGVVFAELGPPAFALKARVQLLRDYGSAASPFNAFLVAQGLETLSLRIERHVANAQRVAEFLAARDDVLSVNYAGLPSSPWHERAKRLAPKGTGAVLSFELAGGIEAGKAFVNALKLHSHVANIGDVRSLVIHPASTTHAQLSPAEQLATGVSPGLVRLAVGIEGIDDILADLELGFAAARRFSADPQSVAAF
>NZ_CP012506.2|WP_003417452.1|3724130_3725360_-|NADP-dependent-isocitrate-dehydrogenase
MSNAPKIKVSGPVVELDGDEMTRVIWKLIKDMLILPYLDIRLDYYDLGIEHRDATDDQVTIDAAYAIKKHGVGVKCATITPDEARVEEFNLKKMWLSPNGTIRNILGGTIFREPIVISNVPRLVPGWTKPIVIGRHAFGDQYRATNFKVDQPGTVTLTFTPADGSAPIVHEMVSIPEDGGVVLGMYNFKESIRDFARASFSYGLNAKWPVYLSTKNTILKAYDGMFKDEFERVYEEEFKAQFEAAGLTYEHRLIDDMVAACLKWEGGYVWACKNYDGDVQSDTVAQGYGSLGLMTSVLMTADGKTVEAEAAHGTVTRHYRQYQAGKPTSTNPIASIFAWTRGLQHRGKLDGTPEVIDFAHKLESVVIATVESGKMTKDLAILIGPEQDWLNSEEFLDAIADNLEKELAN
>NZ_CP012506.2|WP_009940431.1|3723431_3724064_+|alpha/beta-fold-hydrolase
MLADHVERQLDELGWETSHIVGNSLGGWVAFELERRGRARSVTGIAPAGGWTRWSPVKFEVIAKFIAGAPILAVAHILGQRALRLPFSRLLATLPISATPDGVSERELSGIIDDAAHCPAYFQLLVKALVLPGLQELEHTAVPSHVVLCEQDRVVPPSRFSRHFTDSLPAGHRLTVLDGVGHVPMFEAPGRITELITSFIEECCPHVRAS
>NZ_CP012506.2|WP_003417440.1|3722136_3723147_-|tryptophan--tRNA-ligase
MSTPTGSRRIFSGVQPTSDSLHLGNALGAVAQWVGLQDDHDAFFCVVDLHAITIPQDPEALRRRTLITAAQYLALGIDPGRATIFVQSQVPAHTQLAWVLGCFTGFGQASRMTQFKDKSARQGSEATTVGLFTYPVLQAADVLAYDTELVPVGEDQRQHLELARDVAQRFNSRFPGTLVVPDVLIPKMTAKIYDLQDPTSKMSKSAGTDAGLINLLDDPALSAKKIRSAVTDSERDIRYDPDVKPGVSNLLNIQSAVTGTDIDVLVDGYAGHGYGDLKKDTAEAVVEFVNPIQARVDELTADPAELEAVLAAGAQRAHDVASKTVQRVYDRLGFLL
>NZ_CP012506.2|WP_003417435.1|3721246_3722116_-|inner-membrane-protein-YhjD
MGELAEPGVLDRLRARFGWLDHVVRAFTRFNDRNGSLFAAGLTYYTIFAIFPLLMVGFGVGGFALSRRPELLTTLEERIRTSVSGAVGQQLVDLMNSAIDARASVGVIGLATAAWVGLGWMWHLREALSQMWAHPVAPAGYLRTKLSDLAAMVGTFVVIVATIALTVLGHARPMAAVLRWLEIPQFSVFDEIFRGISVLVSVLVSWVLFTWMIGRLPREPVGLVTAARAGLMAAVGFELFKQVGAIYLQIVLRSPAGAVFGPVLGLMVFAFVTAWLILFATAWAATASA
>NZ_CP012506.2|WP_003900026.1|3720772_3721213_+|heavy-metal-responsive-transcriptional-regulator
MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLALQEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEHDHSTVCWILESDLDEPTAIEVSDIHA
>NZ_CP012506.2|WP_003417421.1|3719452_3720298_-|DUF732-domain-containing-protein
MFTGIASHAGALGAALVVLIGAAILHDGPAAADPNQDDRFLALLEKKEIPAVANVPRVIDAAHKVCRKLDGGMPVNDIVDGLRNDAYNIDPVMRLYPVRLTTTMTRFISAAVEIYCPNHHSKMAFAMANFEPGSNEPTHRVAASTRSAVNSGSDLRASVSDMTIMSPGWREPTGAMLASVLGAVRAGDPLIPNPPPIPVPPPAAQTLIPPPPIVAPPPPRPAPPQQPPPPPPEVEPPAGVPQSGGAAGSGGAGSGGGGGGDGPVEPSPARPMPPGFIRLAP
>NZ_CP012506.2|WP_003417619.1|3742607_3742865_-|DUF3017-domain-containing-protein
MTVRAVLRRTVGAQWPILAGVNFWRRGALLIGIGVGVAAVLRLVLSEERAGLLVVRSKGIDFVTTVTVAAAMVYIASTIDPLGTG
>NZ_CP012506.2|WP_031664658.1|3743120_3752594_-|PPE-family-protein
MNFPVLPPEINSVLMYSGAGSSPLLAAAAAWDGLAEELGSAAVSFGQVTSGLTAGVWQGAAAAAMAAAAAPYAGWLGSVAAQAVAVAGQARAAVAAFEAALAATVDPAAVAVNRMAMRALAMSNLLGQNAAAIAAVEAEYELMWAADVAAMAGYHSGASAAAAALPAFSPPAQALGGGVGAFLNALFAGPAKMLRLNAGLGNVGNYNVGLGNVGIFNLGAANVGAQNLGAANAGSGNFGFGNIGNANFGFGNSGLGLPPGMGNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNVGGFNTGVANVGSYNTGSFNAGNTNTGGFNPGNVNTGWLNTGNTNTGIANSGNVNTGAFISGNFSNGVLWRGDYEGLWGLSGGSTIPAIPIGLELNGGVGPITVLPIQILPTIPLNIHQTFSLGPLVVPDIVIPAFGGGTAIPISVGPITISPITLFPAQNFNTTFPVGPFFGLGVVNISGIEIKDLAGNVTLQLGNLNIDTRINQSFPVTVNWSTPAVTIFPNGISIPNNPLALLASASIGTLGFTIPGFTIPAAPLPLTIDIDGQIDGFSTPPITIDRIPLNLGASVTVGPILINGVNIPATPGFGNTTTAPSSGFFNSGDGGVSGFGNFGAGSSGWWNQAQTEVAGAGSGFANFGSLGSGVLNFGSGVSGLYNTGGLPPGTPAVVSGIGNVGEQLSGLSSAGTALNQSLIINLGLADVGSVNAGFGNVGDFNLGAANIGDLNVGLGNVGGGNVGFGNIGDANFGLGNAGLAAGLAGVGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNSGTGNVGLFNSGTGNFGLFNSGGYNTGIGNGGTGSTGLFNAGNFNTGVANPGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGTVNTGAFITGNDSNGILWRGNFEGLFGLNVGITIPEFPIHWTSTGGIGPIIIPDTTILPPIHLGLTGQANYGFAVPDIPIPAIHIDFDGAADAGFTAPATTLLSALGITGQFRFGPITVSNVQLNPFNVNLKLQFLHDAFPNEFPDPTISVQIQVAIPLTSATLGGLALPLQQTIDAIELPAISFSQSIPIDIPPIDIPASTINGISMSEVVPIDVSVDIPAVTITGTRIDPIPLNFDVLSSAGPINISIIDIPALPGFGNSTELPSSGFFNTGGGGGSGIANFGAGVSGLLNQASSPMVGTLSGLGNAGSLASGVLNSGVDISGMFNVSTLGSAPAVISGFGNLGNHVSGVSIDGLLAMLTSGGSGGSGQPSIIDAAIAELRHLNPLNIVNLGNVGSYNLGFANVGDVNLGAGNLGNLNLGGGNLGGQNLGLGNLGDGNVGFGNLGHGNVGFGNSGLGALPGIGNIGLGNAGSNNVGFGNMGLGNIGFGNTGTNNLGIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGFNTGNVNTGAFNSGSFNNGALWTGDHHGLVGFSYSIEITGSTLVDINETLNLGPVHIDQIDIPGMSLFDIHELVNIGPFRIEPIDVPAVVLDIHETMVIPPIVFLPSMTIGGQTYTIPLDTPPAPAPPPFRLPLLFVNALGDNWIVGASNSTGMSGGFVTAPTQGILIHTGPSSATTGSLALTLPTVTIPTITTSPIPLKIDVSGGLPAFTLFPGGLNIPQNAIPLTIDASGVLDPITIFPGGFTIDPLPLSLALNISVPDSSVPIIIVPPTPGFGNATATPSSGFFNSGAGGVSGFGNFGAGSSGWWNQAHAALAGAGSGVLNVGTLNSGVLNVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQSPIINLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNSGLGAALGIGNIGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGALMSGNFSNGILWRGNYEGLFSYSYSLDVPRITILDAHFTGAFGPVVVPPIPVPAINAHLTGNAAMGAFTIPQIDIPALNPNVTGSVGFGPIAVPSVTIPALTAARAVLDMAASVGATSEIEPFIVWTSSGAIGPTWYSVGRIYNAGDLFVGGNIISGIPTLSTTGPVHAVFNAASQAFNTPALNIHQIPLGFQVPGSIDAITLFPGGLTFPANSLLNLDVFVGTPGATIPAITFPEIPANADGELYVIAGDIPLINIPPTPGIGNTTTVPSSGFFNTGAGGGSGFGNFGANMSGWWNQAHTALAGAGSGIANVGTLHSGVLNLGSGLSGIYNTSTLPLGTPALVSGLGNVGDHLSGLLASNVGQNPITIVNIGLANVGNGNVGLGNIGNLNLGAANIGDVNLGFGNIGDVNLGFGNIGGGNVGFGNIGDANFGFGNSGLAAGLAGMGNIGLGNAGSGNVGWANMGLGNIGFGNTGTNNLGIGLTGDNQSGIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVNAGGFNTGVANAGSYNTGSFNAGDTNTGGFNPGSTNTGWFNTGNANTGVANAGNVNTGALITGNFSNGILWRGNYEGLAGFSFGYPIPLFPAVGADVTGDIGPATIIPPIHIPSIPLGFAAIGHIGPISIPNIAIPSIHLGIDPTFDVGPITVDPITLTIPGLSLDAAVSEIRMTSGSSSGFKVRPSFSFFAVGPDGMPGGEVSILQPFTVAPINLNPTTLHFPGFTIPTGPIHIGLPLSLTIPGFTIPGGTLIPQLPLGLGLSGGTPPFDLPTVVIDRIPVELHASTTIGPVSLPIFGFGGAPGFGNDTTAPSSGFFNTGGGGGSGFSNSGSGMSGVLNAISDPLLGSASGFANFGTQLSGILNRGAGISGVYNTGTLGLVTSAFVSGFMNVGQQLSGLLFAGTGP
>NZ_CP012506.2|WP_049961743.1|3753219_3753666_+|transposase
MDAAITACHHIAIRDDVGARSIRFSVEPTLAGLRTLTDKLSGYDDIDATVEPTSMTWLPLTIAVENAGDTMHMAGARHCARLRGAIVGKSKSDVIDAEVLTRASEVFDLTPLTLPTPAQLALRRSVIRRAGAVIDANRSWRRLMSLAR
>NZ_CP012506.2|WP_003911006.1|3753702_3754443_-|transposase
MAIDPAAAYASAIRTPGLLPNAKLVVDHFHVTTLANDALTAVRRRVTWAFHDRRGRKIDPQWANRRRLLTARERLSDKSFAKMRNRINAVDPRAQILSAWIAKEELRTLLSTVRTGGDPHLARHHLHRFLPGASTRRSPNCSPWPPPLTSHPRSTPSWSPASPTRASVVGEVAEMVGDIDGQCVQVEVPVPERGPAGCGGLDGLGRAGVSATPRVCAAMTAVNVAGRCAGQQADVGPTPQHRCRGR
>NZ_CP012506.2|WP_009938650.1|3754737_3755025_-|hypothetical-protein
MSRRRRRARRAGVVSISVKEYAVTSPKDLPYGEDRIMVRWNKIRWRCREDYCKLGPFTEAITQVPARVRSTLRLRRQMAKAIGDAARSVGRGRPG
>NZ_CP012506.2|WP_003417738.1|3766751_3767546_-|hypothetical-protein
MLASCPARSGAAVADAIKSAVGVQPSGVEHKTLRRMDLVRYLAGGHTTYPPEGFVAGSDVIGTTNPAAAQAIVAAIGTWPPAAGRASALIDSLGGAVGDMDPEGSAFPWCRQSAVVQWYVNTPSDGQVATANKWLSDAHHAVQHFSVGGYVNYLEANAAASQYFGANLSRLTTVRRKYDPDRIMYSGLDFSTRQVAERLLPALGFRVRFGVLVIRCALCTDTVKRLGTLPNLTWSRLKVNVAVTQEQAGVMDLPALPVRRTPRR
>NZ_CP012506.2|WP_003417739.1|3767627_3767999_-|FAD-binding-oxidoreductase
MSAATDLYAVHQALAGESRAIPTGSCPTVGVAGLTLGGGLGADSRHAGLTCDALKSATVVLPGGDAVSASADDHAELFWALRGGGGGNFGVTTSMTFARFPTADCDVVRVDFAPSAAAQVLVG
>NZ_CP012506.2|WP_157132559.1|3767896_3768115_-|hypothetical-protein
MRGGGHSYIGASSANGAMVLDLLGLPGGVHFDSATRNVRCRPRPISMRSIKRWPVRAGRFRPAAARPWVWRV
>NZ_CP012506.2|WP_003417741.1|3768141_3768402_-|hypothetical-protein
MSRQTFLRGAVGAPATSAVFPTILARATPGDGWASLASSIGGQVLLPANGRAFTSGKQIFNSNYSGLNPAAVVTVASQADVRKAVS
>NZ_CP012506.2|WP_003417745.1|3768516_3768906_+|DUF732-domain-containing-protein
MNLRRHQTLTLRLLAASAGILSAAAFAAPAQANPVDDAFIAALNNAGVNYGDPVDAKALGQSVCPILAEPGGSFNTAVASVVARAQGMSQDMAQTFTSIAISMYCPSVMADVASGNLPALPDMPGLPGS

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Crispr_ID: NZ_CP012506_13

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012506_13

4110784-4110872

Orphan

Consensus_repeat	Method
GCTCGGCGACGATGCGGGCCGGATGACGGCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP012506_13

>merge|NZ_CP012506|13|4110784-4110872|CRISPRCasFinder
GCTCGGCGACGATGCGGGCCGGATGACGGCCCGAGGAGGAGCCGAGCAATCGAACCGAGCTCGGCGACGATGCGGGCCGGATGACGGCC

>NZ_CP012506|13|8|4110784-4110872|CRISPRCasFinder
GCTCGGCGACGATGCGGGCCGGATGACGGCC	CGAGGAGGAGCCGAGCAATCGAACCGA
GCTCGGCGACGATGCGGGCCGGATGACGGCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012506.2\|WP_003899626.1\|4101370_4102141_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012506.2\|WP_003419689.1\|4099752_4100616_+\|HAD-IB-family-hydrolase	unknown	unknown	gnl\|CDD\|273654
NZ_CP012506.2\|WP_003899631.1\|4107897_4109853_+\|acetate--CoA-ligase	unknown	unknown	gnl\|CDD\|234677
NZ_CP012506.2\|WP_003906177.1\|4116583_4117258_+\|cAMP-activated-global-transcriptional-regulator-CRP	unknown	unknown	gnl\|CDD\|223736
NZ_CP012506.2\|WP_003419712.1\|4111451_4112435_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_CP012506.2\|WP_003419710.1\|4110932_4111451_+\|phage-holin-family-protein	unknown	unknown	gnl\|CDD\|377816
NZ_CP012506.2\|WP_003902541.1\|4115262_4116000_-\|endonuclease-III	unknown	unknown	gnl\|CDD\|223255
NZ_CP012506.2\|WP_003900733.1\|4102137_4103784_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224048
NZ_CP012506.2\|WP_003419714.1\|4112427_4113621_-\|acid-resistance-serine-protease-MarP	unknown	unknown	gnl\|CDD\|379142
NZ_CP012506.2\|WP_003419733.1\|4118164_4118620_-\|RidA-family-protein	unknown	unknown	gnl\|CDD\|100006
NZ_CP012506.2\|WP_003899635.1\|4116107_4116485_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012506.2\|WP_003901692.1\|4105564_4107190_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|173853
NZ_CP012506.2\|WP_003901693.1\|4107275_4107632_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012506.2\|WP_003899628.1\|4103780_4104644_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224094
NZ_CP012506.2\|WP_003419701.1\|4104636_4105563_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223674
NZ_CP012506.2\|WP_003419718.1\|4113626_4114448_-\|CoA-pyrophosphatase	unknown	unknown	gnl\|CDD\|239518
NZ_CP012506.2\|WP_003419721.1\|4114579_4115263_-\|TlpA-family-protein-disulfide-reductase	unknown	unknown	gnl\|CDD\|239264
NZ_CP012506.2\|WP_153301032.1\|4107731_4107887_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012506.2\|WP_003419731.1\|4117363_4118158_-\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293836
NZ_CP012506.2\|WP_003419708.1\|4109888_4110587_-\|protease	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP012506.2\|WP_003419689.1\|4099752_4100616_+\|HAD-IB-family-hydrolase	gnl\|CDD\|273654	TIGR01490, Uncharacterized_protein_Rv3661/MT3761, HAD-superfamily subfamily IB hydrolase, TIGR01490. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled here are all bacterial. The IB subfamily includes the enzyme phosphoserine phosphatase (TIGR00338). Due to this relationship, several of these sequences have been annotated as "phosphoserine phosphatase related proteins," or "Phosphoserine phosphatase-family enzymes." There is presently no evidence that any of the enzymes in this model possess PSPase activity. OMNI\|NTL01ML1250 is annotated as a "possible transferase," however this is due to the C-terminal domain found on this sequence which is homologous to a group of glycerol-phosphate acyltransferases (between trusted and noise to TIGR00530). A subset of these sequences including OMNI\|CC1962, the Caulobacter crescentus CicA protein cluster together and may represent a separate equivalog. [Unknown function, Enzymes of unknown specificity].	5.37865e-86
NZ_CP012506.2\|WP_003899631.1\|4107897_4109853_+\|acetate--CoA-ligase	gnl\|CDD\|234677	PRK00174, PRK00174, acetyl-CoA synthetase; Provisional.	0
NZ_CP012506.2\|WP_003419712.1\|4111451_4112435_+\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	5.34553e-25
NZ_CP012506.2\|WP_003419710.1\|4110932_4111451_+\|phage-holin-family-protein	gnl\|CDD\|377816	pfam07332, Phage_holin_3_6, Putative Actinobacterial Holin-X, holin superfamily III. Phage_holin_3_6 is a family of small hydrophobic proteins with two or three transmembrane domains of the Hol-X family. Holin proteins are produced by double-stranded DNA bacteriophages that use an endolysin-holin strategy to achieve lysis of their hosts. The endolysins are peptidoglycan-degrading enzymes that are usually accumulated in the cytosol until access to the cell wall substrate is provided by the holin membrane lesion.	8.41555e-32
NZ_CP012506.2\|WP_003902541.1\|4115262_4116000_-\|endonuclease-III	gnl\|CDD\|223255	COG0177, Nth, Predicted EndoIII-related endonuclease [DNA replication, recombination, and repair].	3.2984e-106
NZ_CP012506.2\|WP_003419714.1\|4112427_4113621_-\|acid-resistance-serine-protease-MarP	gnl\|CDD\|379142	pfam13365, Trypsin_2, Trypsin-like peptidase domain. This family includes trypsin-like peptidase domains.	2.19977e-19
NZ_CP012506.2\|WP_003419733.1\|4118164_4118620_-\|RidA-family-protein	gnl\|CDD\|100006	cd02199, YjgF_YER057c_UK114_like_1, This group of proteins belong to a large family of YjgF/YER057c/UK114-like proteins present in bacteria, archaea, and eukaryotes with no definitive function. The conserved domain is similar in structure to chorismate mutase but there is no sequence similarity and no functional connection. Members of this family have been implicated in isoleucine (Yeo7, Ibm1, aldR) and purine (YjgF) biosynthesis, as well as threonine anaerobic degradation (tdcF) and mitochondrial DNA maintenance (Ibm1). This domain homotrimerizes forming a distinct intersubunit cavity that may serve as a small molecule binding site.	7.62827e-68
NZ_CP012506.2\|WP_003906177.1\|4116583_4117258_+\|cAMP-activated-global-transcriptional-regulator-CRP	gnl\|CDD\|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	3.59113e-55
NZ_CP012506.2\|WP_003899628.1\|4103780_4104644_-\|ABC-transporter-permease	gnl\|CDD\|224094	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	2.77559e-81
NZ_CP012506.2\|WP_003419701.1\|4104636_4105563_-\|ABC-transporter-permease	gnl\|CDD\|223674	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	7.57934e-99
NZ_CP012506.2\|WP_003419718.1\|4113626_4114448_-\|CoA-pyrophosphatase	gnl\|CDD\|239518	cd03426, CoAse, Coenzyme A pyrophosphatase (CoAse), a member of the Nudix hydrolase superfamily, functions to catalyze the elimination of oxidized inactive CoA, which can inhibit CoA-utilizing enzymes. The need of CoAses mainly arises under conditions of oxidative stress. CoAse has a conserved Nudix fold and requires a single divalent cation for catalysis. In addition to a signature Nudix motif G[X5]E[X7]REUXEEXGU, where U is Ile, Leu, or Val, CoAse contains an additional motif upstream called the NuCoA motif (LLTXT(SA)X3RX3GX3FPGG) which is postulated to be involved in CoA recognition. CoA plays a central role in lipid metabolism. It is involved in the initial steps of fatty acid sythesis in the cytosol, in the oxidation of fatty acids and the citric acid cycle in the mitochondria, and in the oxidation of long-chain fatty acids in peroxisomes. CoA has the important role of activating fatty acids for further modification into key biological signalling molecules.	1.20605e-47
NZ_CP012506.2\|WP_003419721.1\|4114579_4115263_-\|TlpA-family-protein-disulfide-reductase	gnl\|CDD\|239264	cd02966, TlpA_like_family, TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.	1.72736e-22
NZ_CP012506.2\|WP_003901692.1\|4105564_4107190_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|173853	cd00995, PBP2_NikA_DppA_OppA_like, The substrate-binding domain of an ABC-type nickel/oligopeptide-like import system contains the type 2 periplasmic binding fold. This family represents the periplasmic substrate-binding domain of nickel/dipeptide/oligopeptide transport systems, which function in the import of nickel and peptides, and other closely related proteins. The oligopeptide-binding protein OppA is a periplasmic component of an ATP-binding cassette (ABC) transport system OppABCDEF consisting of five subunits: two homologous integral membrane proteins OppB and OppF that form the translocation pore; two homologous nucleotide-binding domains OppD and OppF that drive the transport process through binding and hydrolysis of ATP; and the substrate-binding protein or receptor OppA that determines the substrate specificity of the transport system. The dipeptide (DppA) and oligopeptide (OppA) binding proteins differ in several ways. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Similar to the ABC-type dipeptide and oligopeptide import systems, nickel transporter is comprised of five subunits NikABCDE: the two pore-forming integral inner membrane proteins NikB and NikC; the two inner membrane-associated proteins with ATPase activity NikD and NikE; and the periplasmic nickel binding NikA, which is the initial nickel receptor that controls the chemotactic response away from nickel. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand binding domains of ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	4.27273e-122
NZ_CP012506.2\|WP_003419731.1\|4117363_4118158_-\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293836	cd16278, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain. Members of the MBL-fold metallohydrolase superfamily are mainly hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) for which this fold was named perform only a small fraction of the activities included in this superfamily.Activities carried out by superfamily members include class B beta-lactamases, hydroxyacylglutathione hydrolases, AHL (acyl homoserine lactone) lactonases, persulfide dioxygenases, flavodiiron proteins, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J and ribonuclease Z, cyclic nucleotide phosphodiesterases, insecticide hydrolases, and proteins required for natural transformation competence. Classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, however the diversity of biological roles is reflected in variations in the active site metallo-chemistry.	3.29322e-75
NZ_CP012506.2\|WP_003900733.1\|4102137_4103784_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224048	COG1123, COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only].	0

>NZ_CP012506.2|WP_003419708.1|4109888_4110587_-|protease
MQTAHRRFAAAFAAVLLAVVCLPANTAAADDKLPLGGGAGIVVNGDTMCTLTTIGHDKNGDLIGFTSAHCGGPGAQIAAEGAENAGPVGIMVAGNDGLDYAVIKFDPAKVTPVAVFNGFAINGIGPDPSFGQIACKQGRTTGNSCGVTWGPGESPGTLVMQVCGGPGDSGAPVTVDNLLVGMIHGAFSDNLPSCITKYIPLHTPAVVMSINADLADINAKNRPGAGFVPVPA
>NZ_CP012506.2|WP_003899631.1|4107897_4109853_+|acetate--CoA-ligase
MSESTPEVSSSYPPPAHFAEHANARAELYREAEEDRLAFWAKQANRLSWTTPFTEVLDWSGAPFAKWFVGGELNVAYNCVDRHVEAGHGDRVAIHWEGEPVGDRRTLTYSDLLAEVSKAANALTDLGLVAGDRVAIYLPLIPEAVIAMLACARLGIMHSVVFGGFTAAALQARIVDAQAKLLITADGQFRRGKPSPLKAAADEALAAIPDCSVEHVLVVRRTGIEMAWSEGRDLWWHHVVGSASPAHTPEPFDSEHPLFLLYTSGTTGKPKGIMHTSGGYLTQCCYTMRTIFDVKPDSDVFWCTADIGWVTGHTYGVYGPLCNGVTEVLYEGTPDTPDRHRHFQIIEKYGVTIYYTAPTLIRMFMKWGREIPDSHDLSSLRLLGSVGEPINPEAWRWYRDVIGGGRTPLVDTWWQTETGSAMISPLPGIAAAKPGSAMTPLPGISAKIVDDHGDPLPPHTEGAQHVTGYLVLDQPWPSMLRGIWGDPARYWHSYWSKFSDKGYYFAGDGARIDPDGAIWVLGRIDDVMNVSGHRISTAEVESALVAHSGVAEAAVVGVTDETTTQAICAFVVLRANYAPHDRTAEELRTEVARVISPIARPRDVHVVPELPKTRSGKIMRRLLRDVAENRELGDTSTLLDPTVFDAIRAAK
>NZ_CP012506.2|WP_153301032.1|4107731_4107887_+|hypothetical-protein
MPAARCKADQRVMCSLQDTGFLGYDCILVSDCTVTTLPSSTSAMPAVSSRG
>NZ_CP012506.2|WP_003901693.1|4107275_4107632_+|hypothetical-protein
MTVSYHATQSAGEPVGRCFGNAHTVVRDPVLATHRDCASQGKTSPDRALLACGILEEDRWCRRCGEEGSPRDTVTRRLTHWCGLHPGVSVDHSCLSRCCRLDCRRRGPAVPQRDPPRR
>NZ_CP012506.2|WP_003901692.1|4105564_4107190_-|ABC-transporter-substrate-binding-protein
MVRRMRAALAALATGLLVLAPVAGCGGGVLSPDVVLVNGGEPPNPLIPTGTNDSNGGRIIDRLFAGLMSYDAVGKPSLEVAQSIESADNVNYRITVKPGWKFTDGSPVTAHSFVDAWNYGALSTNAQLQQHFFSPIEGFDDVAGAPGDKSRTTMSGLRVVNDLEFTVRLKAPTIDFTLRLGHSSFYPLPDSAFRDMAAFGRNPIGNGPYKLADGPAGPAWEHNVRIDLVPNPDYHGNRKPRNKGLRFEFYANLDTAYADLLSGNLDVLDTIPPSALTVYQRDLGDHATSGPAAINQTLDTPLRLPHFGGEEGRLRRLALSAAINRPQICQQIFAGTRSPARDFTARSLPGFDPNLPGNEVLDYDPQRARRLWAQADAISPWSGRYAIAYNADAGHRDWVDAVANSIKNVLGIDAVAAPQPTFAGFRTQITNRAIDSAFRAGWRGDYPSMIEFLAPLFTAGAGSNDVGYINPEFDAALAAAEAAPTLTESHELVNDAQRILFHDMPVVPLWDYISVVGWSSQVSNVTVTWNGLPDYENIVKA
>NZ_CP012506.2|WP_003419701.1|4104636_4105563_-|ABC-transporter-permease
MGWYVARRVAVMVPVFLGATLLIYGMVFLLPGDPVAALAGDRPLTPAVAAQLRSHYHLDDPFLVQYLRYLGGILHGDLGRAYSGLPVSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIAGLRQGGIFDSAVLVTGLVIIAIPIFVLGFLAQFLFGVQLEIAPVTVGERASVGRLLLPGIVLGAMSFAYVVRLTRSAVAANAHADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGADLGALMGGAIVTEGIFNIHGVGGVLYQAVTRQETPTVVSIVTVLVLIYLITNLLVDLLYAALDPRIRYG
>NZ_CP012506.2|WP_003899628.1|4103780_4104644_-|ABC-transporter-permease
MAEHTGFWLDAWRGLRRRPKFVIAAALILLILVVAAFPSLFTAADPTYADPSQSMLAPSAAHWFGTDLQGHDIYSRTVYGARASVTVGLGATLAVFVVGGALGALAGFYGSWIDAVVSRVTDVFLGLPLLLAAIVLMQVMHHRTVWTVIAILALFGWPQVARIARGAVLEVRASDYVLAAKALGLNRFQILLRHALPNAVGPVIAVATVALGIFIVTEATLSYLGVGLPTSVVSWGGDINVAQTRLRSGSPILFYPAGALAITVLAFMMMGDALRDALDPASRAWRA
>NZ_CP012506.2|WP_003900733.1|4102137_4103784_-|ABC-transporter-ATP-binding-protein
MSVPAAPLLSVEGLEVTFGTDAPAVCGVDLAVRSGQTVAVVGESGSGKSTTAAAILGLLPAGGRITAGRVVFDGRDITGADAKRLRSIRGREIGYVPQDPMTNLNPVWKVGFQVTEALRANTDGRAARRRAVELLAEAGLPDPAKQAGRYPHQLSGGMCQRALIAIGLAGRPRLLIADEPTSALDVTVQRQVLDHLQGLTDELGTALLLITHDLALAAQRAEAVVVVRRGVVVESGAAQSILQSPQHEYTRRLVAAAPSLTARSRRPPESRSRATTQAGDILVVSELTKIYRESRGAPWRRVESRAVDGVSFRLPRASTLAIVGESGSGKSTLARMVLGLLQPTSGTVVFDGTYDVGALARDQVLAFRRRVQPVFQNPYSSLDPMYSVFRAIEEPLRVHHVGDRRQRQRAVRELVDQVALPSSILGRRPRELSGGQRQRVAIARALALRPEVLVCDEAVSALDVLVQAQILDLLADLQADLGLTYLFISHDLAVIRQIADDVLVMRAGRVVEHASTEEVFSRPRHEYTRQLLQAIPGAPSAPRKVGNL
>NZ_CP012506.2|WP_003899626.1|4101370_4102141_-|hypothetical-protein
MTVDPLAPLMELPGVAAASDRVRDALSRVHRHRANLRGWPVAAAEASLRAARASSVLDGGPARLHDAGAPTSGKPALSDPVFAGALRVGQALEGGAGPVVGVWRRAPLQALARLHMLAAADQVDDDRLGRPRSDADVGPRLELLADVVTHPTLASAPVVAAVAHGELLTLRPFGCADGVVARAVSRLVTIATGLDPHGLGVPEVIWMRQPAEYHDAARRFAGGTPDGVAGWLLLCCGAMLDGAREALSIAESLSPG
>NZ_CP012506.2|WP_003419689.1|4099752_4100616_+|HAD-IB-family-hydrolase
MTVSDSPAQRQTPPQTPGGTAPRARTAAFFDLDKTIIAKSSTLAFSKPFFAQGLLNRRAVLKSSYAQFIFLLSGADHDQMDRMRTHLTNMCAGWDVAQVRSIVNETLHDIVTPLVFAEAADLIAAHKLCGRDVVVVSASGEEIVGPIARALGATHAMATRMIVEDGKYTGEVAFYCYGEGKAQAIRELAASEGYPLEHCYAYSDSITDLPMLEAVGHASVVNPDRGLRKEASVRGWPVLSFSRPVSLRDRIPAPSAAAIATTAAVGISALAAGAVTYALLRRFAFQP
>NZ_CP012506.2|WP_003419710.1|4110932_4111451_+|phage-holin-family-protein
MSKIDRKNGVPSTLTTIPLADPHAGPAEPSIGDLIKDATTQMSTLVRAEVELARAEITRDVKKGLTGSVFFISSLVVGFYSTFFFFFFVAELLDTWIWRWVAFLLVFAIMVVVTAVLALLGFLKVRRIRGPRQTIASVKETRTALTPGHDKTPVTPKPVTSDRATPVDPSGW
>NZ_CP012506.2|WP_003419712.1|4111451_4112435_+|alpha/beta-hydrolase
MAAPDPSMTRIAGPWRHLDVHANGIRFHVVEAVPSGQPEGPDAATPPMQPALARPLVILLHGFGSFWWSWRHQLCGLTGARVVAVDLRGYGGSDKPPRGYDGWTLAGDTAGLIRALGHPSATLVGHADGGLACWTTALLHSRLVRAIALISSPHPAALRRSTLTRRDQRHALLPTLLRYQLPIWPERLLTRNNAAEIERLVRARGCAKWLASEDFSQAIDHLRQAIQIPAAAHCALEYQRWAVRSQLRSEGRRFIRAMTQQLGMPLLHLRGDADPYVLADPVERTQRYAPHGRYISIAGAGHFSHEEAPEEVNRHLMRFLEQVHQLS
>NZ_CP012506.2|WP_003419714.1|4112427_4113621_-|acid-resistance-serine-protease-MarP
MTPSQWLDIAVLAVAFIAAISGWRAGALGSMLSFGGVLLGATAGVLLAPHIVSQISAPRAKLFAALFLILALVVVGEVAGVVLGRAVRGAIRNRPIRLIDSVIGVGVQLVVVLTAAWLLAMPLTQSKEQPELAAAVKGSRVLARVNEAAPTWLKTVPKRLSALLNTSGLPAVLEPFSRTPVIPVASPDPALVNNPVVAATEPSVVKIRSLAPRCQKVLEGTGFVISPDRVMTNAHVVAGSNNVTVYAGDKPFEATVVSYDPSVDVAILAVPHLPPPPLVFAAEPAKTGADVVVLGYPGGGNFTATPARIREAIRLSGPDIYGDPEPVTRDVYTIRADVEQGDSGGPLIDLNGQVLGVVFGAAVDDAETGFVLTAGEVAGQLAKIGATQPVGTGACVS
>NZ_CP012506.2|WP_003419718.1|4113626_4114448_-|CoA-pyrophosphatase
MSAGGTPLQAGATPTGSRGTVALRPDAGPSWLRPLVDNVGQIPDAYRRRLPADVLAMVTAAGAVSAMTSSRRDHREAAVLVLFSGPEAGPGDGGVPDDADLLLTVRASTLRHHAGQAAFPGGVVDPADDGPVATALREANEETGIDPSRLHPLATMERTFIAPSRFHVVPVLAYSPDPGPVAVVNEAETAIVARVPVRAFINPANRLMVYRRPHTRRWAGPAFLLNQMLVWGFTGQVISAVLDVAGWAQPWDTGDIRELDAAMVLIDDESDPR
>NZ_CP012506.2|WP_003419721.1|4114579_4115263_-|TlpA-family-protein-disulfide-reductase
MPSLPTTPAETAMTTLTGKTRWTIAILAVVAALMAALVAQLHDYSASSTISQRPAPREHRDGDTPEALAWSRQRANLPPCPAAGNGPGAAALRGVVVVCAGDGSAVDVARALAGRRVVINLWAHWCAPCMTELPVMAEYQRRVGPAVLVVTVHQGQNEAAALSRLADLGVRLPTLQDDRRRVAAALRVANVMPATVVLRPDGSVAQTLPRAFGSADEIVAAVGNDAG
>NZ_CP012506.2|WP_003902541.1|4115262_4116000_-|endonuclease-III
MRGRWSAETRLALVRRARRMNRALAQAFPHVYCELDFTTPLELAVATILSAQSTDKRVNLTTPALFARYRTARDYAQADRTELESLIRPTGFYRNKAASLIGLGQALVERFGGEVPATMDKLVTLPGVGRKTANVILGNAFGIPGITVDTHFGRLVRRWRWTTAEDPVKVEQAVGELIERKEWTLLSHRVIFHGRRVCHARRPACGVCVLAKDCPSFGLGPTEPLLAAPLVQGPETDHLLALAGL
>NZ_CP012506.2|WP_003899635.1|4116107_4116485_+|hypothetical-protein
MFTLLVSWLLVACVPGLLMLATLGLGRLERFLARDTVTATDVAEFLEQAEAVDVHTLARNGMPEALDYLHRRQARRITDSPPLGSGAGPRYAGPLFVTDLDSPVEPPRHGQPNPQFRTARHANHV
>NZ_CP012506.2|WP_003906177.1|4116583_4117258_+|cAMP-activated-global-transcriptional-regulator-CRP
MDEILARAGIFQGVEPSAIAALTKQLQPVDFPRGHTVFAEGEPGNRLYIIISGKVKIGRRAPDGRENLLTIMGPSDMFGELSIFDPGPRTSSATTITEVRAVSMDRDALRSWIADRPEISEQLLRVLARRLRRTNNNLADLIFTDVPGRVAKQLLQLAQRFGTQEGGALRVTHDLTQEEIAQLVGASRETVNKALADFAHRGWIRLEGKSVLISDSERLARRAR
>NZ_CP012506.2|WP_003419731.1|4117363_4118158_-|MBL-fold-metallo-hydrolase
MSKTAESLTHPAYGQLRAVTDTASVLLADNPGLLTLDGTNTWVLRGPLSDELVVVDPGPDDDEHLARVAALGRIALVLISHRHGDHTSGIDKLVALTGAPVRAADPQFLRRDGETLTDGEVIDVAGLTITVLATPGHTADSLSFVLDDAVLTADTVLGCGTTVIDKEDGSLADYLESLHRLRGLGRRTVLPGHGPDLLDLEAIASGYLLHRHERLEQIRAALRDLGDDATVREVVEHVYLDVDEKLWNAAEWSVQAQLDYLRTR
>NZ_CP012506.2|WP_003419733.1|4118164_4118620_-|RidA-family-protein
MSAKARLGQLGVTLPQVAAPLAAYVPAVRTGNLVYTAGQLPLEAGKLVRTGKLGADVNPEEGKTLARICALNALAAVDSLVDLDAVTRVVKVVGFVASAPGFHGQPSVINGASDLLAEVFGDSGAHARSAVGVSELPLDAPVEVELIVEVG

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP012506_10	10.17\|3115325\|41\|NZ_CP012506\|CRT	3115325-3115365	41	NZ_CP012506.2	1978719-1978759	0	1.0
NZ_CP012506_11	11.1\|3659522\|59\|NZ_CP012506\|CRISPRCasFinder	3659522-3659580	59	NZ_CP012506.2	3659585-3659643	0	1.0
NZ_CP012506_2	2.2\|333164\|17\|NZ_CP012506\|PILER-CR	333164-333180	17	NZ_CP012506.2	836367-836383	1	0.941
NZ_CP012506_2	2.2\|333164\|17\|NZ_CP012506\|PILER-CR	333164-333180	17	NZ_CP012506.2	1185043-1185059	1	0.941
NZ_CP012506_2	2.2\|333164\|17\|NZ_CP012506\|PILER-CR	333164-333180	17	NZ_CP012506.2	1209043-1209059	1	0.941
NZ_CP012506_2	2.2\|333164\|17\|NZ_CP012506\|PILER-CR	333164-333180	17	NZ_CP012506.2	2419404-2419420	1	0.941
NZ_CP012506_2	2.2\|333164\|17\|NZ_CP012506\|PILER-CR	333164-333180	17	NZ_CP012506.2	2800219-2800235	1	0.941
NZ_CP012506_2	2.2\|333164\|17\|NZ_CP012506\|PILER-CR	333164-333180	17	NZ_CP012506.2	4037053-4037069	1	0.941
NZ_CP012506_7	7.2\|2071073\|18\|NZ_CP012506\|CRT	2071073-2071090	18	NZ_CP012506.2	399405-399422	1	0.944
NZ_CP012506_7	7.2\|2071073\|18\|NZ_CP012506\|CRT	2071073-2071090	18	NZ_CP012506.2	605708-605725	1	0.944
NZ_CP012506_7	7.4\|2071163\|18\|NZ_CP012506\|CRT	2071163-2071180	18	NZ_CP012506.2	3440742-3440759	1	0.944
NZ_CP012506_3	3.10\|336936\|24\|NZ_CP012506\|CRT	336936-336959	24	NZ_CP012506.2	148584-148607	2	0.917
NZ_CP012506_3	3.10\|336936\|24\|NZ_CP012506\|CRT	336936-336959	24	NZ_CP012506.2	1212541-1212564	2	0.917
NZ_CP012506_3	3.10\|336936\|24\|NZ_CP012506\|CRT	336936-336959	24	NZ_CP012506.2	2419916-2419939	2	0.917
NZ_CP012506_3	3.10\|336936\|24\|NZ_CP012506\|CRT	336936-336959	24	NZ_CP012506.2	2689900-2689923	2	0.917
NZ_CP012506_4	4.5\|365110\|42\|NZ_CP012506\|CRISPRCasFinder	365110-365151	42	NZ_CP012506.2	373126-373167	2	0.952
NZ_CP012506_4	4.6\|365185\|33\|NZ_CP012506\|CRISPRCasFinder	365185-365217	33	NZ_CP012506.2	371941-371973	2	0.939
NZ_CP012506_6	6.4\|1571004\|22\|NZ_CP012506\|CRISPRCasFinder	1571004-1571025	22	NZ_CP012506.2	1207588-1207609	2	0.909

1. spacer 10.17|3115325|41|NZ_CP012506|CRT matches to position: 1978719-1978759, mismatch: 0, identity: 1.0

acgttggaagcgtttcgagcgtacggactttccggatgcag	CRISPR spacer
acgttggaagcgtttcgagcgtacggactttccggatgcag	Protospacer
*****************************************

2. spacer 11.1|3659522|59|NZ_CP012506|CRISPRCasFinder matches to position: 3659585-3659643, mismatch: 0, identity: 1.0

ctgtgagtcgagtgagcggaacgaacgaagtgagtgacgggaacgagacgaacaatccg	CRISPR spacer
ctgtgagtcgagtgagcggaacgaacgaagtgagtgacgggaacgagacgaacaatccg	Protospacer
***********************************************************

3. spacer 2.2|333164|17|NZ_CP012506|PILER-CR matches to position: 836367-836383, mismatch: 1, identity: 0.941

cgctggcgccgccgtca	CRISPR spacer
cgccggcgccgccgtca	Protospacer
***.*************

4. spacer 2.2|333164|17|NZ_CP012506|PILER-CR matches to position: 1185043-1185059, mismatch: 1, identity: 0.941

cgctggcgccgccgtca	CRISPR spacer
cgccggcgccgccgtca	Protospacer
***.*************

5. spacer 2.2|333164|17|NZ_CP012506|PILER-CR matches to position: 1209043-1209059, mismatch: 1, identity: 0.941

cgctggcgccgccgtca	CRISPR spacer
cgctggcgccgccgcca	Protospacer
**************.**

6. spacer 2.2|333164|17|NZ_CP012506|PILER-CR matches to position: 2419404-2419420, mismatch: 1, identity: 0.941

cgctggcgccgccgtca	CRISPR spacer
cgccggcgccgccgtca	Protospacer
***.*************

7. spacer 2.2|333164|17|NZ_CP012506|PILER-CR matches to position: 2800219-2800235, mismatch: 1, identity: 0.941

cgctggcgccgccgtca	CRISPR spacer
cgccggcgccgccgtca	Protospacer
***.*************

8. spacer 2.2|333164|17|NZ_CP012506|PILER-CR matches to position: 4037053-4037069, mismatch: 1, identity: 0.941

cgctggcgccgccgtca	CRISPR spacer
cgccggcgccgccgtca	Protospacer
***.*************

9. spacer 7.2|2071073|18|NZ_CP012506|CRT matches to position: 399405-399422, mismatch: 1, identity: 0.944

gatcagcccgacggcgtt	CRISPR spacer
gatcagcccgtcggcgtt	Protospacer
********** *******

10. spacer 7.2|2071073|18|NZ_CP012506|CRT matches to position: 605708-605725, mismatch: 1, identity: 0.944

gatcagcccgacggcgtt	CRISPR spacer
gatcagcccgtcggcgtt	Protospacer
********** *******

11. spacer 7.4|2071163|18|NZ_CP012506|CRT matches to position: 3440742-3440759, mismatch: 1, identity: 0.944

gatcagcgtcccgccggt	CRISPR spacer
gatcagcgtcccgctggt	Protospacer
**************.***

12. spacer 3.10|336936|24|NZ_CP012506|CRT matches to position: 148584-148607, mismatch: 2, identity: 0.917

ccgttgccgatgagcccgccggcg	CRISPR spacer
ccgttgccgatcagcccaccggcg	Protospacer
*********** *****.******

13. spacer 3.10|336936|24|NZ_CP012506|CRT matches to position: 1212541-1212564, mismatch: 2, identity: 0.917

ccgttgccgatgagcccgccggcg	CRISPR spacer
ccgttgccgatcagcccggcggcg	Protospacer
*********** ****** *****

14. spacer 3.10|336936|24|NZ_CP012506|CRT matches to position: 2419916-2419939, mismatch: 2, identity: 0.917

ccgttgccgatgagcccgccggcg	CRISPR spacer
ccgttgccgatcagcccggcggcg	Protospacer
*********** ****** *****

15. spacer 3.10|336936|24|NZ_CP012506|CRT matches to position: 2689900-2689923, mismatch: 2, identity: 0.917

ccgttgccgatgagcccgccggcg	CRISPR spacer
ccgatgccgaagagcccgccggcg	Protospacer
*** ****** *************

16. spacer 4.5|365110|42|NZ_CP012506|CRISPRCasFinder matches to position: 373126-373167, mismatch: 2, identity: 0.952

ccggtgcccgagttgaagaacccgatgtttccgctgccggag	CRISPR spacer
ccggtgcccgagttgaacaacccgacgtttccgctgccggag	Protospacer
***************** *******.****************

17. spacer 4.6|365185|33|NZ_CP012506|CRISPRCasFinder matches to position: 371941-371973, mismatch: 2, identity: 0.939

aggctgccgatcccgatctggccgttgccggtg	CRISPR spacer
aggctgccgaacccgatctggccgctgccggtg	Protospacer
********** *************.********

18. spacer 6.4|1571004|22|NZ_CP012506|CRISPRCasFinder matches to position: 1207588-1207609, mismatch: 2, identity: 0.909

gtcgccgatcaggccggcggca	CRISPR spacer
gttgccgatcagcccggcggca	Protospacer
**.********* *********

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP012506_6	6.4\|1571004\|22\|NZ_CP012506\|CRISPRCasFinder	1571004-1571025	22	NZ_CP016905	Ralstonia solanacearum strain KACC 10709 plasmid unnamed1	1975819-1975840	1	0.955
NZ_CP012506_6	6.4\|1571004\|22\|NZ_CP012506\|CRISPRCasFinder	1571004-1571025	22	NZ_CP022791	Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence	1109892-1109913	1	0.955
NZ_CP012506_6	6.4\|1571004\|22\|NZ_CP012506\|CRISPRCasFinder	1571004-1571025	22	NZ_CP016457	Sphingobium sp. RAC03 plasmid pBSY17_2, complete sequence	87869-87890	1	0.955
NZ_CP012506_6	6.15\|1571823\|22\|NZ_CP012506\|CRISPRCasFinder	1571823-1571844	22	NZ_CP054617	Azospirillum oryzae strain KACC 14407 plasmid unnamed3, complete sequence	362668-362689	1	0.955
NZ_CP012506_6	6.15\|1571823\|22\|NZ_CP012506\|CRISPRCasFinder	1571823-1571844	22	NZ_CP043441	Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence	2289382-2289403	1	0.955
NZ_CP012506_6	6.15\|1571823\|22\|NZ_CP012506\|CRISPRCasFinder	1571823-1571844	22	NZ_CP020899	Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRphaBra5c, complete sequence	81656-81677	1	0.955
NZ_CP012506_6	6.15\|1571823\|22\|NZ_CP012506\|CRISPRCasFinder	1571823-1571844	22	NC_013858	Azospirillum sp. B510 plasmid pAB510d, complete sequence	56160-56181	1	0.955
NZ_CP012506_3	3.10\|336936\|24\|NZ_CP012506\|CRT	336936-336959	24	AWQW01000318	Streptomyces niveus NCIMB 11891 plasmid pSniv4, complete sequence, whole genome shotgun sequence	14614-14637	2	0.917
NZ_CP012506_6	6.2\|1570896\|22\|NZ_CP012506\|CRISPRCasFinder	1570896-1570917	22	NZ_CP032323	Azospirillum brasilense strain MTCC4035 plasmid p2, complete sequence	881140-881161	2	0.909
NZ_CP012506_6	6.2\|1570896\|22\|NZ_CP012506\|CRISPRCasFinder	1570896-1570917	22	NZ_CP007795	Azospirillum brasilense strain Az39 plasmid AbAZ39_p2, complete sequence	225972-225993	2	0.909
NZ_CP012506_6	6.2\|1570896\|22\|NZ_CP012506\|CRISPRCasFinder	1570896-1570917	22	NZ_CP032341	Azospirillum brasilense strain MTCC4038 plasmid p2, complete sequence	451168-451189	2	0.909
NZ_CP012506_6	6.2\|1570896\|22\|NZ_CP012506\|CRISPRCasFinder	1570896-1570917	22	NZ_CP032347	Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence	234992-235013	2	0.909
NZ_CP012506_6	6.2\|1570896\|22\|NZ_CP012506\|CRISPRCasFinder	1570896-1570917	22	NZ_CP012916	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p2, complete sequence	597449-597470	2	0.909
NZ_CP012506_6	6.3\|1570950\|22\|NZ_CP012506\|CRISPRCasFinder	1570950-1570971	22	NZ_CP025510	Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvD, complete sequence	117076-117097	2	0.909
NZ_CP012506_6	6.4\|1571004\|22\|NZ_CP012506\|CRISPRCasFinder	1571004-1571025	22	NZ_CP021032	Rhizobium sp. NXC14 plasmid pRspNXC14b, complete sequence	448838-448859	2	0.909
NZ_CP012506_6	6.4\|1571004\|22\|NZ_CP012506\|CRISPRCasFinder	1571004-1571025	22	NC_007765	Rhizobium etli CFN 42 plasmid p42e, complete sequence	160471-160492	2	0.909
NZ_CP012506_6	6.4\|1571004\|22\|NZ_CP012506\|CRISPRCasFinder	1571004-1571025	22	NZ_CP021028	Rhizobium sp. TAL182 plasmid pRetTAL182d, complete sequence	175264-175285	2	0.909
NZ_CP012506_6	6.4\|1571004\|22\|NZ_CP012506\|CRISPRCasFinder	1571004-1571025	22	NZ_CP013634	Rhizobium sp. N324 plasmid pRspN324d, complete sequence	457593-457614	2	0.909
NZ_CP012506_6	6.4\|1571004\|22\|NZ_CP012506\|CRISPRCasFinder	1571004-1571025	22	NZ_CP013503	Rhizobium esperanzae strain N561 plasmid pRspN561c, complete sequence	166709-166730	2	0.909
NZ_CP012506_6	6.4\|1571004\|22\|NZ_CP012506\|CRISPRCasFinder	1571004-1571025	22	NZ_CP013509	Rhizobium sp. N1341 plasmid pRspN1341d, complete sequence	166709-166730	2	0.909
NZ_CP012506_6	6.4\|1571004\|22\|NZ_CP012506\|CRISPRCasFinder	1571004-1571025	22	NZ_CP013520	Rhizobium sp. N113 plasmid pRspN113c, complete sequence	166709-166730	2	0.909
NZ_CP012506_6	6.4\|1571004\|22\|NZ_CP012506\|CRISPRCasFinder	1571004-1571025	22	NZ_CP013493	Rhizobium sp. N6212 plasmid pRspN6212c, complete sequence	166709-166730	2	0.909
NZ_CP012506_6	6.4\|1571004\|22\|NZ_CP012506\|CRISPRCasFinder	1571004-1571025	22	NZ_CP013516	Rhizobium sp. N1314 plasmid pRspN1314e, complete sequence	164465-164486	2	0.909
NZ_CP012506_6	6.4\|1571004\|22\|NZ_CP012506\|CRISPRCasFinder	1571004-1571025	22	NZ_CP054616	Azospirillum oryzae strain KACC 14407 plasmid unnamed2, complete sequence	97458-97479	2	0.909
NZ_CP012506_6	6.4\|1571004\|22\|NZ_CP012506\|CRISPRCasFinder	1571004-1571025	22	NZ_CP012698	Microbacterium sp. No. 7 plasmid A, complete sequence	53118-53139	2	0.909
NZ_CP012506_6	6.4\|1571004\|22\|NZ_CP012506\|CRISPRCasFinder	1571004-1571025	22	NZ_CP013104	Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence	100830-100851	2	0.909
NZ_CP012506_6	6.4\|1571004\|22\|NZ_CP012506\|CRISPRCasFinder	1571004-1571025	22	NZ_CP032323	Azospirillum brasilense strain MTCC4035 plasmid p2, complete sequence	307854-307875	2	0.909
NZ_CP012506_6	6.4\|1571004\|22\|NZ_CP012506\|CRISPRCasFinder	1571004-1571025	22	NZ_CP032325	Azospirillum brasilense strain MTCC4035 plasmid p4, complete sequence	23841-23862	2	0.909
NZ_CP012506_6	6.4\|1571004\|22\|NZ_CP012506\|CRISPRCasFinder	1571004-1571025	22	NZ_CP022369	Azospirillum sp. TSH58 plasmid TSH58_p05, complete sequence	279961-279982	2	0.909
NZ_CP012506_6	6.4\|1571004\|22\|NZ_CP012506\|CRISPRCasFinder	1571004-1571025	22	NZ_CP007794	Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence	359201-359222	2	0.909
NZ_CP012506_6	6.4\|1571004\|22\|NZ_CP012506\|CRISPRCasFinder	1571004-1571025	22	NC_013855	Azospirillum sp. B510 plasmid pAB510a, complete sequence	606826-606847	2	0.909
NZ_CP012506_6	6.4\|1571004\|22\|NZ_CP012506\|CRISPRCasFinder	1571004-1571025	22	NC_013857	Azospirillum sp. B510 plasmid pAB510c, complete sequence	411558-411579	2	0.909
NZ_CP012506_6	6.4\|1571004\|22\|NZ_CP012506\|CRISPRCasFinder	1571004-1571025	22	NZ_CP054029	Rhizobium sp. JKLM19E plasmid pPR19E02, complete sequence	300111-300132	2	0.909
NZ_CP012506_6	6.4\|1571004\|22\|NZ_CP012506\|CRISPRCasFinder	1571004-1571025	22	NZ_CP032342	Azospirillum brasilense strain MTCC4038 plasmid p3, complete sequence	483830-483851	2	0.909
NZ_CP012506_6	6.4\|1571004\|22\|NZ_CP012506\|CRISPRCasFinder	1571004-1571025	22	NZ_CP024312	Rhizobium sp. NXC24 plasmid pRspNXC24a, complete sequence	68146-68167	2	0.909
NZ_CP012506_6	6.4\|1571004\|22\|NZ_CP012506\|CRISPRCasFinder	1571004-1571025	22	CP042595	Streptomyces albogriseolus strain LBX-2 plasmid pSALBX2, complete sequence	175112-175133	2	0.909
NZ_CP012506_6	6.4\|1571004\|22\|NZ_CP012506\|CRISPRCasFinder	1571004-1571025	22	NZ_CP032349	Azospirillum brasilense strain MTCC4039 plasmid p3, complete sequence	314082-314103	2	0.909
NZ_CP012506_6	6.5\|1571058\|25\|NZ_CP012506\|CRISPRCasFinder	1571058-1571082	25	NZ_CP032342	Azospirillum brasilense strain MTCC4038 plasmid p3, complete sequence	402883-402907	2	0.92
NZ_CP012506_6	6.5\|1571058\|25\|NZ_CP012506\|CRISPRCasFinder	1571058-1571082	25	NZ_CP033321	Azospirillum brasilense strain Cd plasmid p3, complete sequence	416172-416196	2	0.92
NZ_CP012506_6	6.5\|1571058\|25\|NZ_CP012506\|CRISPRCasFinder	1571058-1571082	25	NZ_CP033315	Azospirillum brasilense strain Sp 7 plasmid p3, complete sequence	472935-472959	2	0.92
NZ_CP012506_1	1.11\|332485\|27\|NZ_CP012506\|CRT	332485-332511	27	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	5507414-5507440	3	0.889
NZ_CP012506_1	1.11\|332485\|27\|NZ_CP012506\|CRT	332485-332511	27	NZ_AP022607	Mycobacterium branderi strain JCM 12687 plasmid pJCM12687	756232-756258	3	0.889
NZ_CP012506_3	3.10\|336936\|24\|NZ_CP012506\|CRT	336936-336959	24	NC_003078	Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence	360034-360057	3	0.875
NZ_CP012506_3	3.10\|336936\|24\|NZ_CP012506\|CRT	336936-336959	24	NC_009339	Mycolicibacterium gilvum PYR-GCK plasmid pMFLV01, complete sequence	151456-151479	3	0.875
NZ_CP012506_3	3.10\|336936\|24\|NZ_CP012506\|CRT	336936-336959	24	NZ_CP019586	Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence	361748-361771	3	0.875
NZ_CP012506_3	3.10\|336936\|24\|NZ_CP012506\|CRT	336936-336959	24	NZ_CP015280	Mycobacterium chimaera strain DSM 44623 plasmid unnamed 2, complete sequence	71374-71397	3	0.875
NZ_CP012506_3	3.10\|336936\|24\|NZ_CP012506\|CRT	336936-336959	24	NZ_CP023153	Mycobacterium chimaera strain FLAC0070 plasmid pFLAC0070_2, complete sequence	59010-59033	3	0.875
NZ_CP012506_3	3.10\|336936\|24\|NZ_CP012506\|CRT	336936-336959	24	NZ_CP021799	Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence	427571-427594	3	0.875
NZ_CP012506_3	3.10\|336936\|24\|NZ_CP012506\|CRT	336936-336959	24	NZ_CP021828	Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence	1611953-1611976	3	0.875
NZ_CP012506_3	3.10\|336936\|24\|NZ_CP012506\|CRT	336936-336959	24	NZ_CP019224	Mycobacterium chimaera strain CDC 2015-22-71 plasmid pDHQP20152271_1, complete sequence	6848-6871	3	0.875
NZ_CP012506_3	3.10\|336936\|24\|NZ_CP012506\|CRT	336936-336959	24	NZ_CP021823	Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence	42933-42956	3	0.875
NZ_CP012506_3	3.10\|336936\|24\|NZ_CP012506\|CRT	336936-336959	24	NZ_CP021795	Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence	1261102-1261125	3	0.875
NZ_CP012506_3	3.10\|336936\|24\|NZ_CP012506\|CRT	336936-336959	24	NZ_CP021806	Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence	1313840-1313863	3	0.875
NZ_CP012506_3	3.10\|336936\|24\|NZ_CP012506\|CRT	336936-336959	24	NZ_CP019484	Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence	569757-569780	3	0.875
NZ_CP012506_3	3.10\|336936\|24\|NZ_CP012506\|CRT	336936-336959	24	NZ_CP019487	Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence	357298-357321	3	0.875
NZ_CP012506_3	3.10\|336936\|24\|NZ_CP012506\|CRT	336936-336959	24	NC_020560	Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence	360034-360057	3	0.875
NZ_CP012506_3	3.10\|336936\|24\|NZ_CP012506\|CRT	336936-336959	24	MT188704	Mesorhizobium phage Cp1R7A-A1, complete genome	40680-40703	3	0.875
NZ_CP012506_3	3.10\|336936\|24\|NZ_CP012506\|CRT	336936-336959	24	KR080200	Mycobacterium phage AlanGrant, complete genome	26194-26217	3	0.875
NZ_CP012506_3	3.10\|336936\|24\|NZ_CP012506\|CRT	336936-336959	24	KR080194	Mycobacterium phage Vincenzo, complete genome	26194-26217	3	0.875
NZ_CP012506_3	3.10\|336936\|24\|NZ_CP012506\|CRT	336936-336959	24	NC_019849	Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence	1386530-1386553	3	0.875
NZ_CP012506_3	3.10\|336936\|24\|NZ_CP012506\|CRT	336936-336959	24	NZ_LT703507	Mycobacterium chimaera strain Mycobacterium chimaera MC045 isolate Mycobacterium chimaera plasmid 3	36742-36765	3	0.875
NZ_CP012506_3	3.10\|336936\|24\|NZ_CP012506\|CRT	336936-336959	24	NZ_CP015273	Mycobacterium chimaera strain ZUERICH-1 plasmid unnamed 1, complete sequence	28965-28988	3	0.875
NZ_CP012506_3	3.10\|336936\|24\|NZ_CP012506\|CRT	336936-336959	24	NC_017326	Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence	1347296-1347319	3	0.875
NZ_CP012506_3	3.10\|336936\|24\|NZ_CP012506\|CRT	336936-336959	24	NC_017323	Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence	938156-938179	3	0.875
NZ_CP012506_3	3.10\|336936\|24\|NZ_CP012506\|CRT	336936-336959	24	NZ_CP009146	Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence	1309275-1309298	3	0.875
NZ_CP012506_3	3.10\|336936\|24\|NZ_CP012506\|CRT	336936-336959	24	NC_018701	Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence	1366753-1366776	3	0.875
NZ_CP012506_3	3.10\|336936\|24\|NZ_CP012506\|CRT	336936-336959	24	NZ_CP029333	Mycobacterium avium subsp. hominissuis strain MAC109 plasmid pMAC109a, complete sequence	32147-32170	3	0.875
NZ_CP012506_3	3.10\|336936\|24\|NZ_CP012506\|CRT	336936-336959	24	NZ_CP021802	Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence	1978453-1978476	3	0.875
NZ_CP012506_3	3.10\|336936\|24\|NZ_CP012506\|CRT	336936-336959	24	NC_017957	Tistrella mobilis KA081020-065 plasmid pTM1, complete sequence	364121-364144	3	0.875
NZ_CP012506_3	3.10\|336936\|24\|NZ_CP012506\|CRT	336936-336959	24	NZ_CP021820	Sinorhizobium meliloti strain M162 plasmid psymB, complete sequence	43684-43707	3	0.875
NZ_CP012506_3	3.10\|336936\|24\|NZ_CP012506\|CRT	336936-336959	24	NZ_CP021831	Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence	1554638-1554661	3	0.875
NZ_CP012506_3	3.10\|336936\|24\|NZ_CP012506\|CRT	336936-336959	24	NZ_CP021814	Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence	1274874-1274897	3	0.875
NZ_CP012506_3	3.10\|336936\|24\|NZ_CP012506\|CRT	336936-336959	24	NZ_CP021810	Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence	490650-490673	3	0.875
NZ_CP012506_3	3.10\|336936\|24\|NZ_CP012506\|CRT	336936-336959	24	NZ_CP021218	Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence	1543298-1543321	3	0.875
NZ_CP012506_3	3.10\|336936\|24\|NZ_CP012506\|CRT	336936-336959	24	NC_008703	Mycobacterium sp. KMS plasmid pMKMS01, complete sequence	104903-104926	3	0.875
NZ_CP012506_3	3.10\|336936\|24\|NZ_CP012506\|CRT	336936-336959	24	NZ_CP026527	Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence	1375160-1375183	3	0.875
NZ_CP012506_3	3.10\|336936\|24\|NZ_CP012506\|CRT	336936-336959	24	NZ_CP021083	Deinococcus ficus strain CC-FR2-10 plasmid pDFI2, complete sequence	71148-71171	3	0.875
NZ_CP012506_3	3.10\|336936\|24\|NZ_CP012506\|CRT	336936-336959	24	NZ_CP045964	Mycobacterium chimaera strain AUSMDU00007395 plasmid pAUSMDU00007395_01, complete sequence	20208-20231	3	0.875
NZ_CP012506_3	3.10\|336936\|24\|NZ_CP012506\|CRT	336936-336959	24	NC_022654	Mycobacterium kansasii ATCC 12478 plasmid pMK12478, complete sequence	121555-121578	3	0.875
NZ_CP012506_6	6.4\|1571004\|22\|NZ_CP012506\|CRISPRCasFinder	1571004-1571025	22	NZ_KY349138	Mycolicibacterium sp. CBMA 213 plasmid pCBMA213_2, complete sequence	9264-9285	3	0.864
NZ_CP012506_6	6.4\|1571004\|22\|NZ_CP012506\|CRISPRCasFinder	1571004-1571025	22	NZ_CP021649	Acidovorax sp. T1 plasmid p1-T1, complete sequence	13233-13254	3	0.864
NZ_CP012506_6	6.5\|1571058\|25\|NZ_CP012506\|CRISPRCasFinder	1571058-1571082	25	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	937294-937318	3	0.88
NZ_CP012506_6	6.5\|1571058\|25\|NZ_CP012506\|CRISPRCasFinder	1571058-1571082	25	NZ_CP022999	Rhizobium sp. 11515TR strain 10195 plasmid p11515TR-A, complete sequence	1470762-1470786	3	0.88
NZ_CP012506_6	6.5\|1571058\|25\|NZ_CP012506\|CRISPRCasFinder	1571058-1571082	25	MN586053	Arthrobacter phage BeatusComedenti, complete genome	26689-26713	3	0.88
NZ_CP012506_6	6.5\|1571058\|25\|NZ_CP012506\|CRISPRCasFinder	1571058-1571082	25	NC_031254	Arthrobacter phage Kitkat, complete genome	26809-26833	3	0.88
NZ_CP012506_6	6.5\|1571058\|25\|NZ_CP012506\|CRISPRCasFinder	1571058-1571082	25	NC_031231	Arthrobacter phage KellEzio, complete genome	26691-26715	3	0.88
NZ_CP012506_6	6.5\|1571058\|25\|NZ_CP012506\|CRISPRCasFinder	1571058-1571082	25	NC_021289	Burkholderia insecticola plasmid p1, complete sequence	633177-633201	3	0.88
NZ_CP012506_6	6.5\|1571058\|25\|NZ_CP012506\|CRISPRCasFinder	1571058-1571082	25	NZ_CP030129	Indioceanicola profundi strain SCSIO 08040 plasmid unnamed3, complete sequence	74124-74148	3	0.88
NZ_CP012506_6	6.15\|1571823\|22\|NZ_CP012506\|CRISPRCasFinder	1571823-1571844	22	NC_008270	Rhodococcus jostii RHA1 plasmid pRHL2, complete sequence	380879-380900	3	0.864
NZ_CP012506_7	7.5\|2071202\|24\|NZ_CP012506\|CRT	2071202-2071225	24	NZ_CP049158	Caballeronia sp. SBC1 plasmid pSBC1_2, complete sequence	1555522-1555545	3	0.875
NZ_CP012506_7	7.5\|2071202\|24\|NZ_CP012506\|CRT	2071202-2071225	24	NZ_CP049318	Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence	1560190-1560213	3	0.875
NZ_CP012506_3	3.10\|336936\|24\|NZ_CP012506\|CRT	336936-336959	24	NZ_CP046573	Rhodococcus sp. WAY2 plasmid pRWAY01, complete sequence	866930-866953	4	0.833
NZ_CP012506_4	4.1\|364855\|27\|NZ_CP012506\|CRISPRCasFinder	364855-364881	27	NC_023591	Mycobacterium phage Adler, complete genome	61249-61275	4	0.852
NZ_CP012506_4	4.1\|364855\|27\|NZ_CP012506\|CRISPRCasFinder	364855-364881	27	KF981876	UNVERIFIED: Mycobacterium phage ADLER F1725, complete genome	61247-61273	4	0.852
NZ_CP012506_4	4.7\|365251\|27\|NZ_CP012506\|CRISPRCasFinder	365251-365277	27	NZ_CP022363	Azospirillum sp. TSH58 plasmid TSH58_p03, complete sequence	10066-10092	4	0.852
NZ_CP012506_4	4.10\|365461\|27\|NZ_CP012506\|CRISPRCasFinder	365461-365487	27	NZ_CP030864	Streptomyces globosus strain LZH-48 plasmid unnamed2, complete sequence	460464-460490	4	0.852
NZ_CP012506_4	4.10\|365461\|27\|NZ_CP012506\|CRISPRCasFinder	365461-365487	27	NC_016652	Rhodococcus phage REQ2, complete genome	36035-36061	4	0.852
NZ_CP012506_6	6.1\|1570836\|28\|NZ_CP012506\|CRISPRCasFinder	1570836-1570863	28	NZ_CP027859	Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence	818773-818800	4	0.857
NZ_CP012506_6	6.1\|1570836\|28\|NZ_CP012506\|CRISPRCasFinder	1570836-1570863	28	NZ_CP032054	Streptomyces clavuligerus strain F1D-5 plasmid pSCL1, complete sequence	420542-420569	4	0.857
NZ_CP012506_6	6.1\|1570836\|28\|NZ_CP012506\|CRISPRCasFinder	1570836-1570863	28	NZ_CP016560	Streptomyces clavuligerus strain F613-1 plasmid pSCL4, complete sequence	77799-77826	4	0.857
NZ_CP012506_6	6.5\|1571058\|25\|NZ_CP012506\|CRISPRCasFinder	1571058-1571082	25	NZ_CP021372	Rhizobium sp. ACO-34A plasmid pRACO34Ad, complete sequence	176640-176664	4	0.84
NZ_CP012506_6	6.5\|1571058\|25\|NZ_CP012506\|CRISPRCasFinder	1571058-1571082	25	LR134127	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 7	29428-29452	4	0.84
NZ_CP012506_6	6.5\|1571058\|25\|NZ_CP012506\|CRISPRCasFinder	1571058-1571082	25	LR134127	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 7	38191-38215	4	0.84
NZ_CP012506_6	6.5\|1571058\|25\|NZ_CP012506\|CRISPRCasFinder	1571058-1571082	25	MT553342	Microbacterium phage Kelcole, complete genome	51573-51597	4	0.84
NZ_CP012506_6	6.5\|1571058\|25\|NZ_CP012506\|CRISPRCasFinder	1571058-1571082	25	NC_048068	Microbacterium phage OneinaGillian, complete genome	50894-50918	4	0.84
NZ_CP012506_6	6.5\|1571058\|25\|NZ_CP012506\|CRISPRCasFinder	1571058-1571082	25	MT310894	Microbacterium phage Tempo, complete genome	51697-51721	4	0.84
NZ_CP012506_6	6.5\|1571058\|25\|NZ_CP012506\|CRISPRCasFinder	1571058-1571082	25	NZ_CP047175	Rathayibacter sp. VKM Ac-2760 plasmid unnamed2, complete sequence	42080-42104	4	0.84
NZ_CP012506_6	6.5\|1571058\|25\|NZ_CP012506\|CRISPRCasFinder	1571058-1571082	25	NZ_CP013631	Rhizobium sp. N324 plasmid pRspN324a, complete sequence	67777-67801	4	0.84
NZ_CP012506_6	6.5\|1571058\|25\|NZ_CP012506\|CRISPRCasFinder	1571058-1571082	25	MN034284	Leviviridae sp. isolate H2_Rhizo_Litter_49_scaffold_25938 sequence	624-648	4	0.84
NZ_CP012506_6	6.14\|1571766\|25\|NZ_CP012506\|CRISPRCasFinder	1571766-1571790	25	MN582064	Podoviridae sp. ctka020, complete genome	29274-29298	4	0.84
NZ_CP012506_7	7.5\|2071202\|24\|NZ_CP012506\|CRT	2071202-2071225	24	NZ_CP028348	Novosphingobium sp. THN1 plasmid pTHN, complete sequence	680430-680453	4	0.833
NZ_CP012506_7	7.5\|2071202\|24\|NZ_CP012506\|CRT	2071202-2071225	24	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	5913119-5913142	4	0.833
NZ_CP012506_7	7.5\|2071202\|24\|NZ_CP012506\|CRT	2071202-2071225	24	NZ_CP015007	Aminobacter aminovorans strain KCTC 2477 plasmid pAA02, complete sequence	143186-143209	4	0.833
NZ_CP012506_1	1.2\|332005\|27\|NZ_CP012506\|CRT	332005-332031	27	MN103533	Mycobacterium phage Weirdo19, complete genome	26901-26927	5	0.815
NZ_CP012506_1	1.11\|332485\|27\|NZ_CP012506\|CRT	332485-332511	27	MK415400	Phage apr34_1784, complete genome	5470-5496	5	0.815
NZ_CP012506_1	1.11\|332485\|27\|NZ_CP012506\|CRT	332485-332511	27	NZ_CP031166	Euzebya sp. DY32-46 plasmid pEDY32-46I, complete sequence	161455-161481	5	0.815
NZ_CP012506_1	1.11\|332485\|27\|NZ_CP012506\|CRT	332485-332511	27	NC_011987	Agrobacterium radiobacter K84 plasmid pAtK84c, complete sequence	35634-35660	5	0.815
NZ_CP012506_1	1.12\|332530\|30\|NZ_CP012506\|CRT	332530-332559	30	NC_013858	Azospirillum sp. B510 plasmid pAB510d, complete sequence	201261-201290	5	0.833
NZ_CP012506_1	1.12\|332530\|30\|NZ_CP012506\|CRT	332530-332559	30	KM389325	UNVERIFIED: Pseudomonas phage F_ET2439sp/ET602 clone ctg7180000000169 genomic sequence	195-224	5	0.833
NZ_CP012506_1	1.12\|332530\|30\|NZ_CP012506\|CRT	332530-332559	30	NZ_CP030074	Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence	519541-519570	5	0.833
NZ_CP012506_1	1.12\|332530\|30\|NZ_CP012506\|CRT	332530-332559	30	NZ_CP049701	Bradyrhizobium sp. 1S5 strain 323S2 plasmid pB323S2b, complete sequence	734-763	5	0.833
NZ_CP012506_1	1.12\|332530\|30\|NZ_CP012506\|CRT	332530-332559	30	NZ_CP049701	Bradyrhizobium sp. 1S5 strain 323S2 plasmid pB323S2b, complete sequence	295647-295676	5	0.833
NZ_CP012506_1	1.12\|332530\|30\|NZ_CP012506\|CRT	332530-332559	30	NZ_CP049701	Bradyrhizobium sp. 1S5 strain 323S2 plasmid pB323S2b, complete sequence	416946-416975	5	0.833
NZ_CP012506_4	4.1\|364855\|27\|NZ_CP012506\|CRISPRCasFinder	364855-364881	27	LR794124	Vibrio phage vB_Vc_SrVc9 genome assembly, chromosome: 1	34861-34887	5	0.815
NZ_CP012506_4	4.1\|364855\|27\|NZ_CP012506\|CRISPRCasFinder	364855-364881	27	NC_012662	Vibrio phage VP93, complete genome	35301-35327	5	0.815
NZ_CP012506_4	4.7\|365251\|27\|NZ_CP012506\|CRISPRCasFinder	365251-365277	27	NZ_CP016084	Streptomyces sp. SAT1 plasmid unnamed4, complete sequence	2189-2215	5	0.815
NZ_CP012506_4	4.7\|365251\|27\|NZ_CP012506\|CRISPRCasFinder	365251-365277	27	MN693945	Marine virus AFVG_250M952, complete genome	34909-34935	5	0.815
NZ_CP012506_4	4.10\|365461\|27\|NZ_CP012506\|CRISPRCasFinder	365461-365487	27	NZ_CP020899	Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRphaBra5c, complete sequence	369429-369455	5	0.815
NZ_CP012506_4	4.10\|365461\|27\|NZ_CP012506\|CRISPRCasFinder	365461-365487	27	NZ_CP013525	Rhizobium phaseoli strain R744 plasmid pRphaR744c, complete sequence	338832-338858	5	0.815
NZ_CP012506_4	4.10\|365461\|27\|NZ_CP012506\|CRISPRCasFinder	365461-365487	27	NZ_CP013554	Rhizobium phaseoli strain N931 plasmid pRphaN931b, complete sequence	363377-363403	5	0.815
NZ_CP012506_4	4.10\|365461\|27\|NZ_CP012506\|CRISPRCasFinder	365461-365487	27	NZ_CP015368	Methylobacterium phyllosphaerae strain CBMB27 plasmid CBMB27-p1, complete sequence	104717-104743	5	0.815
NZ_CP012506_4	4.10\|365461\|27\|NZ_CP012506\|CRISPRCasFinder	365461-365487	27	NZ_CP013588	Rhizobium phaseoli strain N161 plasmid pRphaN161c, complete sequence	338543-338569	5	0.815
NZ_CP012506_4	4.10\|365461\|27\|NZ_CP012506\|CRISPRCasFinder	365461-365487	27	NZ_CP013560	Rhizobium phaseoli strain N841 plasmid pRphaN841c, complete sequence	340811-340837	5	0.815
NZ_CP012506_4	4.10\|365461\|27\|NZ_CP012506\|CRISPRCasFinder	365461-365487	27	NZ_CP013577	Rhizobium phaseoli strain N671 plasmid pRphaN671c, complete sequence	342690-342716	5	0.815
NZ_CP012506_4	4.10\|365461\|27\|NZ_CP012506\|CRISPRCasFinder	365461-365487	27	NZ_CP013549	Rhizobium phaseoli strain R611 plasmid pRetR611b, complete sequence	343060-343086	5	0.815
NZ_CP012506_4	4.10\|365461\|27\|NZ_CP012506\|CRISPRCasFinder	365461-365487	27	NZ_CP013529	Rhizobium phaseoli strain R723 plasmid pRphaR723b, complete sequence	355714-355740	5	0.815
NZ_CP012506_4	4.10\|365461\|27\|NZ_CP012506\|CRISPRCasFinder	365461-365487	27	NZ_CP013534	Rhizobium phaseoli strain R650 plasmid pRphaR650b, complete sequence	343060-343086	5	0.815
NZ_CP012506_4	4.10\|365461\|27\|NZ_CP012506\|CRISPRCasFinder	365461-365487	27	NZ_CP013539	Rhizobium phaseoli strain R630 plasmid pRphaR630b, complete sequence	348335-348361	5	0.815
NZ_CP012506_4	4.10\|365461\|27\|NZ_CP012506\|CRISPRCasFinder	365461-365487	27	NZ_CP013545	Rhizobium phaseoli strain R620 plasmid pRphaR620c, complete sequence	343052-343078	5	0.815
NZ_CP012506_4	4.10\|365461\|27\|NZ_CP012506\|CRISPRCasFinder	365461-365487	27	NZ_CP020444	Paracoccus yeei strain FDAARGOS_252 plasmid unnamed4, complete sequence	69464-69490	5	0.815
NZ_CP012506_4	4.10\|365461\|27\|NZ_CP012506\|CRISPRCasFinder	365461-365487	27	NZ_CP013565	Rhizobium phaseoli strain N831 plasmid pRphaN831b, complete sequence	363377-363403	5	0.815
NZ_CP012506_4	4.10\|365461\|27\|NZ_CP012506\|CRISPRCasFinder	365461-365487	27	NZ_CP013582	Rhizobium phaseoli strain N261 plasmid pRphaN261b, complete sequence	355714-355740	5	0.815
NZ_CP012506_4	4.10\|365461\|27\|NZ_CP012506\|CRISPRCasFinder	365461-365487	27	NZ_CP013571	Rhizobium phaseoli strain N771 plasmid pRphaN771c, complete sequence	342690-342716	5	0.815
NZ_CP012506_4	4.10\|365461\|27\|NZ_CP012506\|CRISPRCasFinder	365461-365487	27	NZ_CP044078	Paracoccus yeei strain FDAARGOS_643 plasmid unnamed1, complete sequence	10340-10366	5	0.815
NZ_CP012506_4	4.10\|365461\|27\|NZ_CP012506\|CRISPRCasFinder	365461-365487	27	NZ_CP031081	Paracoccus yeei strain CCUG 32053 plasmid pYEE3, complete sequence	19365-19391	5	0.815
NZ_CP012506_4	4.10\|365461\|27\|NZ_CP012506\|CRISPRCasFinder	365461-365487	27	MN586031	Gordonia phage Gambino, complete genome	3053-3079	5	0.815
NZ_CP012506_4	4.10\|365461\|27\|NZ_CP012506\|CRISPRCasFinder	365461-365487	27	KU998236	Gordonia phage Blueberry, complete genome	3053-3079	5	0.815
NZ_CP012506_4	4.10\|365461\|27\|NZ_CP012506\|CRISPRCasFinder	365461-365487	27	MN062704	Gordonia phage JuJu, complete genome	3063-3089	5	0.815
NZ_CP012506_4	4.10\|365461\|27\|NZ_CP012506\|CRISPRCasFinder	365461-365487	27	MK501729	Gordonia phage Walrus, complete genome	3053-3079	5	0.815
NZ_CP012506_4	4.10\|365461\|27\|NZ_CP012506\|CRISPRCasFinder	365461-365487	27	NC_031226	Gordonia phage BaxterFox, complete genome	2982-3008	5	0.815
NZ_CP012506_4	4.10\|365461\|27\|NZ_CP012506\|CRISPRCasFinder	365461-365487	27	MK967393	Rhodococcus phage Whack, complete genome	3063-3089	5	0.815
NZ_CP012506_4	4.10\|365461\|27\|NZ_CP012506\|CRISPRCasFinder	365461-365487	27	MT723935	Gordonia phage Azula, complete genome	3053-3079	5	0.815
NZ_CP012506_4	4.10\|365461\|27\|NZ_CP012506\|CRISPRCasFinder	365461-365487	27	KU963249	Gordonia phage Yeezy, complete genome	2982-3008	5	0.815
NZ_CP012506_4	4.10\|365461\|27\|NZ_CP012506\|CRISPRCasFinder	365461-365487	27	MH153808	Gordonia phage Petra, complete genome	3053-3079	5	0.815
NZ_CP012506_4	4.10\|365461\|27\|NZ_CP012506\|CRISPRCasFinder	365461-365487	27	MT639650	Gordonia phage Ohgeesy, complete genome	2982-3008	5	0.815
NZ_CP012506_4	4.10\|365461\|27\|NZ_CP012506\|CRISPRCasFinder	365461-365487	27	MH536818	Gordonia phage Frokostdame, complete genome	3055-3081	5	0.815
NZ_CP012506_4	4.10\|365461\|27\|NZ_CP012506\|CRISPRCasFinder	365461-365487	27	KX557275	Gordonia phage CarolAnn, complete genome	3052-3078	5	0.815
NZ_CP012506_6	6.1\|1570836\|28\|NZ_CP012506\|CRISPRCasFinder	1570836-1570863	28	NZ_LN907828	Erwinia gerundensis isolate E_g_EM595 plasmid pEM01, complete sequence	94483-94510	5	0.821
NZ_CP012506_6	6.1\|1570836\|28\|NZ_CP012506\|CRISPRCasFinder	1570836-1570863	28	KU728633	Mycobacterium phage Bipper, complete genome	41992-42019	5	0.821
NZ_CP012506_6	6.1\|1570836\|28\|NZ_CP012506\|CRISPRCasFinder	1570836-1570863	28	MK977701	Mycobacterium phage Cracklewink, complete genome	41985-42012	5	0.821
NZ_CP012506_6	6.1\|1570836\|28\|NZ_CP012506\|CRISPRCasFinder	1570836-1570863	28	NZ_CP016354	Prauserella marina strain DSM 45268 plasmid pPmarDSM45268, complete sequence	100320-100347	5	0.821
NZ_CP012506_6	6.5\|1571058\|25\|NZ_CP012506\|CRISPRCasFinder	1571058-1571082	25	NZ_CP025013	Rhizobium leguminosarum strain Norway plasmid pRLN1, complete sequence	614111-614135	5	0.8
NZ_CP012506_6	6.5\|1571058\|25\|NZ_CP012506\|CRISPRCasFinder	1571058-1571082	25	NZ_CP020331	Martelella mediterranea DSM 17316 strain MACL11 plasmid pMM593, complete sequence	92705-92729	5	0.8
NZ_CP012506_6	6.10\|1571451\|31\|NZ_CP012506\|CRISPRCasFinder	1571451-1571481	31	NC_018746	Pseudomonas putida ND6 plasmid pND6-2, complete sequence	45440-45470	5	0.839
NZ_CP012506_6	6.10\|1571451\|31\|NZ_CP012506\|CRISPRCasFinder	1571451-1571481	31	MN961671	Pseudomonas aeruginosa strain 201330 plasmid p201330-IMP, complete sequence	123562-123592	5	0.839
NZ_CP012506_6	6.10\|1571451\|31\|NZ_CP012506\|CRISPRCasFinder	1571451-1571481	31	MN961672	Pseudomonas aeruginosa strain PA15W plasmid pPA15W-NR, complete sequence	72551-72581	5	0.839
NZ_CP012506_6	6.13\|1571700\|34\|NZ_CP012506\|CRISPRCasFinder	1571700-1571733	34	NC_006362	Nocardia farcinica IFM 10152 plasmid pNF1, complete sequence	89410-89443	5	0.853
NZ_CP012506_1	1.3\|332050\|30\|NZ_CP012506\|CRT	332050-332079	30	NZ_CP018075	Streptomyces venezuelae strain NRRL B-65442 plasmid, complete sequence	57659-57688	6	0.8
NZ_CP012506_1	1.12\|332530\|30\|NZ_CP012506\|CRT	332530-332559	30	CP007644	Rhizobium etli bv. phaseoli str. IE4803 plasmid pRetIE4803c, complete sequence	586980-587009	6	0.8
NZ_CP012506_1	1.12\|332530\|30\|NZ_CP012506\|CRT	332530-332559	30	NC_022995	Burkholderia sp. M701 plasmid pM7012 DNA, complete sequence	453093-453122	6	0.8
NZ_CP012506_1	1.12\|332530\|30\|NZ_CP012506\|CRT	332530-332559	30	NC_003903	Streptomyces coelicolor A3(2) plasmid SCP1, complete sequence	236156-236185	6	0.8
NZ_CP012506_4	4.1\|364855\|27\|NZ_CP012506\|CRISPRCasFinder	364855-364881	27	NZ_CP045917	Pseudomonas aeruginosa strain CF39S plasmid pCF39S, complete sequence	207335-207361	6	0.778
NZ_CP012506_4	4.6\|365185\|33\|NZ_CP012506\|CRISPRCasFinder	365185-365217	33	NZ_CP010410	Xanthomonas sacchari strain R1 plasmid unnamed, complete sequence	435770-435802	6	0.818
NZ_CP012506_4	4.7\|365251\|27\|NZ_CP012506\|CRISPRCasFinder	365251-365277	27	NZ_CP022542	Antarctobacter heliothermus strain SMS3 plasmid pSMS3-2, complete sequence	32942-32968	6	0.778
NZ_CP012506_4	4.9\|365401\|27\|NZ_CP012506\|CRISPRCasFinder	365401-365427	27	NC_009959	Dinoroseobacter shibae DFL 12 = DSM 16493 plasmid pDSHI05, complete sequence	50750-50776	6	0.778
NZ_CP012506_4	4.10\|365461\|27\|NZ_CP012506\|CRISPRCasFinder	365461-365487	27	NZ_CP009112	Rhodococcus opacus strain 1CP plasmid pR1CP1, complete sequence	179708-179734	6	0.778
NZ_CP012506_4	4.10\|365461\|27\|NZ_CP012506\|CRISPRCasFinder	365461-365487	27	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	4846911-4846937	6	0.778
NZ_CP012506_4	4.10\|365461\|27\|NZ_CP012506\|CRISPRCasFinder	365461-365487	27	NZ_AP014705	Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence	78863-78889	6	0.778
NZ_CP012506_4	4.10\|365461\|27\|NZ_CP012506\|CRISPRCasFinder	365461-365487	27	MK494099	Mycobacterium phage Typha, complete genome	33831-33857	6	0.778
NZ_CP012506_5	5.1\|690414\|31\|NZ_CP012506\|CRISPRCasFinder	690414-690444	31	GQ141189	Bifidobacterium phage Bbif-1, complete sequence	38062-38092	6	0.806
NZ_CP012506_6	6.1\|1570836\|28\|NZ_CP012506\|CRISPRCasFinder	1570836-1570863	28	NZ_AP022571	Mycolicibacterium poriferae strain JCM 12603 plasmid pJCM12603, complete sequence	39276-39303	6	0.786
NZ_CP012506_6	6.1\|1570836\|28\|NZ_CP012506\|CRISPRCasFinder	1570836-1570863	28	NC_008703	Mycobacterium sp. KMS plasmid pMKMS01, complete sequence	76834-76861	6	0.786
NZ_CP012506_6	6.1\|1570836\|28\|NZ_CP012506\|CRISPRCasFinder	1570836-1570863	28	NZ_LR594663	Variovorax sp. RA8 plasmid 2	131793-131820	6	0.786
NZ_CP012506_6	6.10\|1571451\|31\|NZ_CP012506\|CRISPRCasFinder	1571451-1571481	31	NZ_LR594669	Variovorax sp. SRS16 plasmid 4	27764-27794	6	0.806
NZ_CP012506_6	6.10\|1571451\|31\|NZ_CP012506\|CRISPRCasFinder	1571451-1571481	31	NZ_LR594673	Variovorax sp. PBL-E5 plasmid 3	438646-438676	6	0.806
NZ_CP012506_6	6.13\|1571700\|34\|NZ_CP012506\|CRISPRCasFinder	1571700-1571733	34	NZ_CP044425	Paracoccus pantotrophus strain DSM 2944 plasmid pPAN2, complete sequence	28989-29022	6	0.824
NZ_CP012506_1	1.3\|332050\|30\|NZ_CP012506\|CRT	332050-332079	30	MK460246	Mycobacterium phage Nibb, complete genome	5349-5378	7	0.767
NZ_CP012506_1	1.12\|332530\|30\|NZ_CP012506\|CRT	332530-332559	30	NZ_CP021767	Ralstonia solanacearum strain RS 489 plasmid unnamed, complete sequence	401811-401840	7	0.767
NZ_CP012506_1	1.12\|332530\|30\|NZ_CP012506\|CRT	332530-332559	30	NZ_AP022611	Mycolicibacterium madagascariense strain JCM 13574 plasmid pJCM13574	191003-191032	7	0.767
NZ_CP012506_1	1.12\|332530\|30\|NZ_CP012506\|CRT	332530-332559	30	NZ_AP022334	Methylosinus sp. C49 isolate Methylosinus sp. C49 plasmid pMSC49b, complete sequence	130127-130156	7	0.767
NZ_CP012506_1	1.12\|332530\|30\|NZ_CP012506\|CRT	332530-332559	30	NZ_CP024582	Roseomonas sp. FDAARGOS_362 plasmid unnamed1, complete sequence	282765-282794	7	0.767
NZ_CP012506_1	1.12\|332530\|30\|NZ_CP012506\|CRT	332530-332559	30	NZ_CP022367	Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence	1675975-1676004	7	0.767
NZ_CP012506_1	1.12\|332530\|30\|NZ_CP012506\|CRT	332530-332559	30	NZ_CP007794	Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence	988804-988833	7	0.767
NZ_CP012506_1	1.12\|332530\|30\|NZ_CP012506\|CRT	332530-332559	30	NZ_AP022622	Mycobacteroides abscessus strain JCM 30620 plasmid pJCM30620_1	1096-1125	7	0.767
NZ_CP012506_1	1.12\|332530\|30\|NZ_CP012506\|CRT	332530-332559	30	NZ_AP022622	Mycobacteroides abscessus strain JCM 30620 plasmid pJCM30620_1	98302-98331	7	0.767
NZ_CP012506_1	1.12\|332530\|30\|NZ_CP012506\|CRT	332530-332559	30	NC_017966	Tistrella mobilis KA081020-065 plasmid pTM2, complete sequence	258318-258347	7	0.767
NZ_CP012506_1	1.12\|332530\|30\|NZ_CP012506\|CRT	332530-332559	30	NZ_CP006368	Aureimonas sp. AU20 plasmid pAU20a, complete sequence	52934-52963	7	0.767
NZ_CP012506_1	1.12\|332530\|30\|NZ_CP012506\|CRT	332530-332559	30	NZ_CP032340	Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence	944807-944836	7	0.767
NZ_CP012506_1	1.12\|332530\|30\|NZ_CP012506\|CRT	332530-332559	30	NZ_CP012915	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence	1187570-1187599	7	0.767
NZ_CP012506_1	1.12\|332530\|30\|NZ_CP012506\|CRT	332530-332559	30	NC_021279	Mycobacteroides abscessus subsp. bolletii 50594 plasmid 2, complete sequence	36879-36908	7	0.767
NZ_CP012506_4	4.4\|365050\|27\|NZ_CP012506\|CRISPRCasFinder	365050-365076	27	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	48081-48107	7	0.741
NZ_CP012506_5	5.1\|690414\|31\|NZ_CP012506\|CRISPRCasFinder	690414-690444	31	MK977708	Mycobacterium phage Fulbright, complete genome	10281-10311	7	0.774
NZ_CP012506_5	5.1\|690414\|31\|NZ_CP012506\|CRISPRCasFinder	690414-690444	31	MG099948	Mycobacterium phage Philonius, complete genome	10281-10311	7	0.774
NZ_CP012506_5	5.1\|690414\|31\|NZ_CP012506\|CRISPRCasFinder	690414-690444	31	MH926055	Mycobacterium phage Chewbacca, complete genome	10281-10311	7	0.774
NZ_CP012506_5	5.1\|690414\|31\|NZ_CP012506\|CRISPRCasFinder	690414-690444	31	MT723932	Mycobacterium phage Schnauzer, complete genome	10281-10311	7	0.774
NZ_CP012506_5	5.1\|690414\|31\|NZ_CP012506\|CRISPRCasFinder	690414-690444	31	KU935726	Mycobacterium phage Xerxes, complete genome	10281-10311	7	0.774
NZ_CP012506_5	5.1\|690414\|31\|NZ_CP012506\|CRISPRCasFinder	690414-690444	31	KU935730	Mycobacterium phage Pipsqueaks, complete genome	10281-10311	7	0.774
NZ_CP012506_5	5.1\|690414\|31\|NZ_CP012506\|CRISPRCasFinder	690414-690444	31	MH316570	Mycobacterium phage Silvafighter, complete genome	10281-10311	7	0.774
NZ_CP012506_5	5.1\|690414\|31\|NZ_CP012506\|CRISPRCasFinder	690414-690444	31	MK524518	Mycobacterium phage Smurph, complete genome	10281-10311	7	0.774
NZ_CP012506_5	5.1\|690414\|31\|NZ_CP012506\|CRISPRCasFinder	690414-690444	31	MK524515	Mycobacterium phage Parmesanjohn, complete genome	10281-10311	7	0.774
NZ_CP012506_5	5.1\|690414\|31\|NZ_CP012506\|CRISPRCasFinder	690414-690444	31	MH697585	Mycobacterium phage Gex, complete genome	10280-10310	7	0.774
NZ_CP012506_5	5.1\|690414\|31\|NZ_CP012506\|CRISPRCasFinder	690414-690444	31	KM588359	Mycobacterium phage Carcharodon, complete genome	10281-10311	7	0.774
NZ_CP012506_5	5.1\|690414\|31\|NZ_CP012506\|CRISPRCasFinder	690414-690444	31	MH697576	Mycobacterium phage Aggie, complete genome	10282-10312	7	0.774
NZ_CP012506_5	5.1\|690414\|31\|NZ_CP012506\|CRISPRCasFinder	690414-690444	31	MH697593	Mycobacterium phage Tapioca, complete genome	10281-10311	7	0.774
NZ_CP012506_5	5.1\|690414\|31\|NZ_CP012506\|CRISPRCasFinder	690414-690444	31	MG099936	Mycobacterium phage Andies, complete genome	10281-10311	7	0.774
NZ_CP012506_5	5.1\|690414\|31\|NZ_CP012506\|CRISPRCasFinder	690414-690444	31	NC_031243	Mycobacterium phage Xeno, complete genome	10281-10311	7	0.774
NZ_CP012506_5	5.1\|690414\|31\|NZ_CP012506\|CRISPRCasFinder	690414-690444	31	JN256079	Mycobacterium phage Charlie, complete genome	10281-10311	7	0.774
NZ_CP012506_6	6.1\|1570836\|28\|NZ_CP012506\|CRISPRCasFinder	1570836-1570863	28	NC_010553	Burkholderia ambifaria MC40-6 plasmid pBMC401, complete sequence	259627-259654	7	0.75
NZ_CP012506_6	6.10\|1571451\|31\|NZ_CP012506\|CRISPRCasFinder	1571451-1571481	31	NZ_CP041045	Paracoccus sp. AK26 plasmid pAK1, complete sequence	281800-281830	7	0.774
NZ_CP012506_6	6.10\|1571451\|31\|NZ_CP012506\|CRISPRCasFinder	1571451-1571481	31	CP017041	Propionibacterium sp. oral taxon 193 strain F0672 plasmid unnamed1, complete sequence	68407-68437	7	0.774
NZ_CP012506_7	7.3\|2071112\|30\|NZ_CP012506\|CRT	2071112-2071141	30	NZ_CP015065	Mesorhizobium ciceri biovar biserrulae strain WSM1284 plasmid pMc1284, complete sequence	52187-52216	7	0.767
NZ_CP012506_7	7.3\|2071112\|30\|NZ_CP012506\|CRT	2071112-2071141	30	NZ_CP015063	Mesorhizobium ciceri strain CC1192 plasmid pMc1192, complete sequence	75140-75169	7	0.767
NZ_CP012506_7	7.3\|2071112\|30\|NZ_CP012506\|CRT	2071112-2071141	30	NC_014918	Mesorhizobium ciceri biovar biserrulae WSM1271 plasmid pMESCI01, complete sequence	376489-376518	7	0.767
NZ_CP012506_12	12.6\|3740365\|32\|NZ_CP012506\|CRT	3740365-3740396	32	NZ_CP021805	Sinorhizobium meliloti strain T073 plasmid psymA, complete sequence	922291-922322	7	0.781
NZ_CP012506_12	12.6\|3740365\|32\|NZ_CP012506\|CRT	3740365-3740396	32	NZ_CP054621	Azospirillum oryzae strain KACC 14407 plasmid unnamed6, complete sequence	68176-68207	7	0.781
NZ_CP012506_1	1.3\|332050\|30\|NZ_CP012506\|CRT	332050-332079	30	NC_008826	Methylibium petroleiphilum PM1 plasmid RPME01, complete sequence	475069-475098	8	0.733
NZ_CP012506_1	1.12\|332530\|30\|NZ_CP012506\|CRT	332530-332559	30	NC_019847	Sinorhizobium meliloti GR4 plasmid pRmeGR4b, complete sequence	101111-101140	8	0.733
NZ_CP012506_1	1.12\|332530\|30\|NZ_CP012506\|CRT	332530-332559	30	NZ_CP039340	Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence	730591-730620	8	0.733
NZ_CP012506_1	1.12\|332530\|30\|NZ_CP012506\|CRT	332530-332559	30	NC_010510	Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, complete sequence	480868-480897	8	0.733
NZ_CP012506_1	1.12\|332530\|30\|NZ_CP012506\|CRT	332530-332559	30	NZ_CP032346	Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence	61392-61421	8	0.733
NZ_CP012506_4	4.6\|365185\|33\|NZ_CP012506\|CRISPRCasFinder	365185-365217	33	NZ_CP017105	Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence	1386736-1386768	8	0.758
NZ_CP012506_4	4.6\|365185\|33\|NZ_CP012506\|CRISPRCasFinder	365185-365217	33	NC_016624	Azospirillum lipoferum 4B plasmid AZO_p5, complete sequence	35126-35158	8	0.758
NZ_CP012506_4	4.6\|365185\|33\|NZ_CP012506\|CRISPRCasFinder	365185-365217	33	NZ_CP039965	Pseudorhodobacter sp. S12M18 plasmid unnamed1, complete sequence	1241611-1241643	8	0.758
NZ_CP012506_4	4.6\|365185\|33\|NZ_CP012506\|CRISPRCasFinder	365185-365217	33	CP007644	Rhizobium etli bv. phaseoli str. IE4803 plasmid pRetIE4803c, complete sequence	275839-275871	8	0.758
NZ_CP012506_4	4.6\|365185\|33\|NZ_CP012506\|CRISPRCasFinder	365185-365217	33	NZ_CP029834	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed4, complete sequence	310597-310629	8	0.758
NZ_CP012506_6	6.10\|1571451\|31\|NZ_CP012506\|CRISPRCasFinder	1571451-1571481	31	NZ_CP017076	Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence	349053-349083	8	0.742
NZ_CP012506_6	6.10\|1571451\|31\|NZ_CP012506\|CRISPRCasFinder	1571451-1571481	31	NZ_CP039899	Agrobacterium tumefaciens strain CFBP5877 plasmid pAtCFBP5877a, complete sequence	336247-336277	8	0.742
NZ_CP012506_6	6.10\|1571451\|31\|NZ_CP012506\|CRISPRCasFinder	1571451-1571481	31	NZ_CP039913	Agrobacterium tumefaciens strain CFBP6625 plasmid pAtCFBP6625b, complete sequence	262996-263026	8	0.742
NZ_CP012506_6	6.10\|1571451\|31\|NZ_CP012506\|CRISPRCasFinder	1571451-1571481	31	NZ_CP039890	Agrobacterium tumefaciens strain CFBP5499 plasmid pAtCFBP5499a, complete sequence	336247-336277	8	0.742
NZ_CP012506_6	6.10\|1571451\|31\|NZ_CP012506\|CRISPRCasFinder	1571451-1571481	31	NZ_CP018001	Rhizobium sp. Y9 plasmid pY9, complete sequence	264529-264559	8	0.742
NZ_CP012506_6	6.10\|1571451\|31\|NZ_CP012506\|CRISPRCasFinder	1571451-1571481	31	NC_022536	Rhizobium sp. IRBG74 plasmid IRBL74_p, complete sequence	458177-458207	8	0.742
NZ_CP012506_6	6.10\|1571451\|31\|NZ_CP012506\|CRISPRCasFinder	1571451-1571481	31	NZ_CP053858	Rhizobium pusense strain 76 plasmid pR76, complete sequence	311056-311086	8	0.742
NZ_CP012506_6	6.10\|1571451\|31\|NZ_CP012506\|CRISPRCasFinder	1571451-1571481	31	NZ_CP018075	Streptomyces venezuelae strain NRRL B-65442 plasmid, complete sequence	88587-88617	8	0.742
NZ_CP012506_6	6.10\|1571451\|31\|NZ_CP012506\|CRISPRCasFinder	1571451-1571481	31	CP036360	Agrobacterium sp. 33MFTa1.1 plasmid p_JBx_073812, complete sequence	284157-284187	8	0.742
NZ_CP012506_6	6.10\|1571451\|31\|NZ_CP012506\|CRISPRCasFinder	1571451-1571481	31	NZ_CP021914	Sagittula sp. P11 plasmid unnamed1, complete sequence	300067-300097	8	0.742
NZ_CP012506_6	6.10\|1571451\|31\|NZ_CP012506\|CRISPRCasFinder	1571451-1571481	31	NZ_AP022319	Burkholderia sp. THE68 plasmid BTHE68_p1, complete sequence	1510497-1510527	8	0.742
NZ_CP012506_7	7.3\|2071112\|30\|NZ_CP012506\|CRT	2071112-2071141	30	NZ_CP017563	Paraburkholderia sprentiae WSM5005 plasmid pl1WSM5005, complete sequence	9194-9223	8	0.733
NZ_CP012506_7	7.3\|2071112\|30\|NZ_CP012506\|CRT	2071112-2071141	30	NZ_CP017563	Paraburkholderia sprentiae WSM5005 plasmid pl1WSM5005, complete sequence	983284-983313	8	0.733
NZ_CP012506_12	12.6\|3740365\|32\|NZ_CP012506\|CRT	3740365-3740396	32	NZ_CP039340	Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence	470080-470111	8	0.75
NZ_CP012506_12	12.6\|3740365\|32\|NZ_CP012506\|CRT	3740365-3740396	32	MG812496	Gordonia phage SallySpecial, complete genome	7676-7707	8	0.75
NZ_CP012506_1	1.13\|332578\|39\|NZ_CP012506\|CRT	332578-332616	39	NZ_CP029832	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed2, complete sequence	24079-24117	9	0.769
NZ_CP012506_4	4.6\|365185\|33\|NZ_CP012506\|CRISPRCasFinder	365185-365217	33	NZ_CP023071	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence	91175-91207	9	0.727
NZ_CP012506_4	4.6\|365185\|33\|NZ_CP012506\|CRISPRCasFinder	365185-365217	33	NZ_CP016287	Rhizobium leguminosarum strain Vaf10 plasmid unnamed1, complete sequence	668963-668995	9	0.727
NZ_CP012506_4	4.6\|365185\|33\|NZ_CP012506\|CRISPRCasFinder	365185-365217	33	NZ_CP022565	Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK01, complete sequence	789706-789738	9	0.727
NZ_CP012506_4	4.6\|365185\|33\|NZ_CP012506\|CRISPRCasFinder	365185-365217	33	NZ_CP048281	Rhizobium leguminosarum bv. viciae 248 plasmid pRle248e, complete sequence	625853-625885	9	0.727
NZ_CP012506_5	5.1\|690414\|31\|NZ_CP012506\|CRISPRCasFinder	690414-690444	31	NZ_CP014964	Geobacter anodireducens strain SD-1 plasmid pSD, complete sequence	13698-13728	9	0.71
NZ_CP012506_5	5.1\|690414\|31\|NZ_CP012506\|CRISPRCasFinder	690414-690444	31	NC_015974	Sphingobium sp. SYK-6 plasmid pSLPG, complete sequence	20960-20990	9	0.71
NZ_CP012506_5	5.1\|690414\|31\|NZ_CP012506\|CRISPRCasFinder	690414-690444	31	NZ_CP005085	Sphingobium sp. TKS plasmid pTK1, complete sequence	15390-15420	9	0.71
NZ_CP012506_6	6.10\|1571451\|31\|NZ_CP012506\|CRISPRCasFinder	1571451-1571481	31	NZ_CP039697	Novosphingobium sp. ABRDHK2 plasmid pABRDHK22, complete sequence	345043-345073	9	0.71
NZ_CP012506_6	6.10\|1571451\|31\|NZ_CP012506\|CRISPRCasFinder	1571451-1571481	31	NZ_CP049244	Rhizobium pseudoryzae strain DSM 19479 plasmid unnamed3, complete sequence	245050-245080	9	0.71
NZ_CP012506_6	6.10\|1571451\|31\|NZ_CP012506\|CRISPRCasFinder	1571451-1571481	31	NC_022049	Paracoccus aminophilus JCM 7686 plasmid pAMI4, complete sequence	194387-194417	9	0.71
NZ_CP012506_6	6.10\|1571451\|31\|NZ_CP012506\|CRISPRCasFinder	1571451-1571481	31	MN234199	Mycobacterium phage Ekdilam, complete genome	24235-24265	9	0.71
NZ_CP012506_6	6.10\|1571451\|31\|NZ_CP012506\|CRISPRCasFinder	1571451-1571481	31	NZ_CP023000	Rhizobium sp. 11515TR strain 10195 plasmid p11515TR-B, complete sequence	1145162-1145192	9	0.71
NZ_CP012506_6	6.10\|1571451\|31\|NZ_CP012506\|CRISPRCasFinder	1571451-1571481	31	NZ_CP015737	Shinella sp. HZN7 plasmid pShin-01, complete sequence	453136-453166	9	0.71
NZ_CP012506_6	6.10\|1571451\|31\|NZ_CP012506\|CRISPRCasFinder	1571451-1571481	31	NZ_CP013740	Streptomyces globisporus C-1027 plasmid pSGL1, complete sequence	2806-2836	9	0.71
NZ_CP012506_6	6.10\|1571451\|31\|NZ_CP012506\|CRISPRCasFinder	1571451-1571481	31	NC_016626	Burkholderia sp. YI23 plasmid byi_1p, complete sequence	1908459-1908489	9	0.71
NZ_CP012506_12	12.6\|3740365\|32\|NZ_CP012506\|CRT	3740365-3740396	32	NC_024970	Streptomyces aureofaciens strain CCM3239 plasmid pSA3239, complete sequence	172271-172302	9	0.719
NZ_CP012506_12	12.6\|3740365\|32\|NZ_CP012506\|CRT	3740365-3740396	32	NZ_KJ396772	Streptomyces lavendulae subsp. lavendulae strain CCM3239 plasmid pSA3239, complete sequence	172271-172302	9	0.719
NZ_CP012506_12	12.6\|3740365\|32\|NZ_CP012506\|CRT	3740365-3740396	32	NZ_CP029831	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed7, complete sequence	326579-326610	9	0.719
NZ_CP012506_12	12.6\|3740365\|32\|NZ_CP012506\|CRT	3740365-3740396	32	NZ_CP024986	Streptomyces lavendulae subsp. lavendulae strain CCM 3239 plasmid pSA3239, complete sequence	68775-68806	9	0.719
NZ_CP012506_12	12.6\|3740365\|32\|NZ_CP012506\|CRT	3740365-3740396	32	NZ_LN868942	Nocardia farcinica strain NCTC11134 plasmid 5, complete sequence	1614-1645	9	0.719
NZ_CP012506_12	12.6\|3740365\|32\|NZ_CP012506\|CRT	3740365-3740396	32	NZ_CP031420	Nocardia farcinica strain W6977 plasmid unnamed2, complete sequence	7035-7066	9	0.719
NZ_CP012506_12	12.6\|3740365\|32\|NZ_CP012506\|CRT	3740365-3740396	32	NZ_CP007130	Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence	113326-113357	9	0.719
NZ_CP012506_12	12.6\|3740365\|32\|NZ_CP012506\|CRT	3740365-3740396	32	NZ_CP024681	Citrobacter freundii strain UMH14 plasmid pUMH14_1, complete sequence	124358-124389	9	0.719
NZ_CP012506_12	12.6\|3740365\|32\|NZ_CP012506\|CRT	3740365-3740396	32	NZ_CP005086	Sphingobium sp. TKS plasmid pTK2, complete sequence	67698-67729	9	0.719
NZ_CP012506_12	12.6\|3740365\|32\|NZ_CP012506\|CRT	3740365-3740396	32	MH271296	Gordonia phage Emperor, complete genome	8733-8764	9	0.719
NZ_CP012506_4	4.6\|365185\|33\|NZ_CP012506\|CRISPRCasFinder	365185-365217	33	NZ_CP013110	Sinorhizobium americanum strain CFNEI 73 plasmid C, complete sequence	91179-91211	10	0.697
NZ_CP012506_4	4.6\|365185\|33\|NZ_CP012506\|CRISPRCasFinder	365185-365217	33	NZ_CP013054	Sinorhizobium americanum CCGM7 plasmid C, complete sequence	90245-90277	10	0.697
NZ_CP012506_4	4.6\|365185\|33\|NZ_CP012506\|CRISPRCasFinder	365185-365217	33	NZ_CP029232	Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence	99166-99198	10	0.697
NZ_CP012506_6	6.10\|1571451\|31\|NZ_CP012506\|CRISPRCasFinder	1571451-1571481	31	NC_017273	Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence	425898-425928	10	0.677
NZ_CP012506_6	6.10\|1571451\|31\|NZ_CP012506\|CRISPRCasFinder	1571451-1571481	31	NZ_CP030864	Streptomyces globosus strain LZH-48 plasmid unnamed2, complete sequence	344090-344120	10	0.677
NZ_CP012506_6	6.10\|1571451\|31\|NZ_CP012506\|CRISPRCasFinder	1571451-1571481	31	NC_008269	Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence	68383-68413	10	0.677
NZ_CP012506_6	6.10\|1571451\|31\|NZ_CP012506\|CRISPRCasFinder	1571451-1571481	31	NC_017590	Thermus thermophilus JL-18 plasmid pTTJL1802, complete sequence	16322-16352	10	0.677
NZ_CP012506_6	6.10\|1571451\|31\|NZ_CP012506\|CRISPRCasFinder	1571451-1571481	31	NZ_AP014581	Burkholderia sp. RPE67 plasmid p3, complete sequence	131907-131937	10	0.677
NZ_CP012506_6	6.13\|1571700\|34\|NZ_CP012506\|CRISPRCasFinder	1571700-1571733	34	NZ_CP054621	Azospirillum oryzae strain KACC 14407 plasmid unnamed6, complete sequence	1081518-1081551	10	0.706
NZ_CP012506_10	10.9\|3114882\|35\|NZ_CP012506\|PILER-CR,CRISPRCasFinder,CRT	3114882-3114916	35	NZ_AP022607	Mycobacterium branderi strain JCM 12687 plasmid pJCM12687	414652-414686	10	0.714
NZ_CP012506_12	12.6\|3740365\|32\|NZ_CP012506\|CRT	3740365-3740396	32	NZ_CP016083	Streptomyces sp. SAT1 plasmid unnamed3, complete sequence	1025-1056	10	0.688
NZ_CP012506_12	12.6\|3740365\|32\|NZ_CP012506\|CRT	3740365-3740396	32	NZ_CP030354	Novosphingobium sp. P6W plasmid pP6W1, complete sequence	89525-89556	10	0.688
NZ_CP012506_12	12.6\|3740365\|32\|NZ_CP012506\|CRT	3740365-3740396	32	NC_013855	Azospirillum sp. B510 plasmid pAB510a, complete sequence	684081-684112	10	0.688
NZ_CP012506_12	12.6\|3740365\|32\|NZ_CP012506\|CRT	3740365-3740396	32	NZ_CP032348	Azospirillum brasilense strain MTCC4039 plasmid p4, complete sequence	399128-399159	10	0.688
NZ_CP012506_12	12.6\|3740365\|32\|NZ_CP012506\|CRT	3740365-3740396	32	NZ_CP023408	Streptomyces fungicidicus strain TXX3120 plasmid p1, complete sequence	301548-301579	11	0.656

1. spacer 6.4|1571004|22|NZ_CP012506|CRISPRCasFinder matches to NZ_CP016905 (Ralstonia solanacearum strain KACC 10709 plasmid unnamed1) position: , mismatch: 1, identity: 0.955

gtcgccgatcaggccggcggca	CRISPR spacer
gtcgccgatcaggccggcggcc	Protospacer
*********************

2. spacer 6.4|1571004|22|NZ_CP012506|CRISPRCasFinder matches to NZ_CP022791 (Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.955

gtcgccgatcaggccggcggca	CRISPR spacer
gtcgccgatcaggccggcggcc	Protospacer
*********************

3. spacer 6.4|1571004|22|NZ_CP012506|CRISPRCasFinder matches to NZ_CP016457 (Sphingobium sp. RAC03 plasmid pBSY17_2, complete sequence) position: , mismatch: 1, identity: 0.955

gtcgccgatcaggccggcggca	CRISPR spacer
gtcgccgatcgggccggcggca	Protospacer
**********.***********

4. spacer 6.15|1571823|22|NZ_CP012506|CRISPRCasFinder matches to NZ_CP054617 (Azospirillum oryzae strain KACC 14407 plasmid unnamed3, complete sequence) position: , mismatch: 1, identity: 0.955

caatccggcggcgccgccggca	CRISPR spacer
caattcggcggcgccgccggca	Protospacer
****.*****************

5. spacer 6.15|1571823|22|NZ_CP012506|CRISPRCasFinder matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.955

caatccggcggcgccgccggca	CRISPR spacer
caattcggcggcgccgccggca	Protospacer
****.*****************

6. spacer 6.15|1571823|22|NZ_CP012506|CRISPRCasFinder matches to NZ_CP020899 (Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRphaBra5c, complete sequence) position: , mismatch: 1, identity: 0.955

caatccggcggcgccgccggca	CRISPR spacer
caattcggcggcgccgccggca	Protospacer
****.*****************

7. spacer 6.15|1571823|22|NZ_CP012506|CRISPRCasFinder matches to NC_013858 (Azospirillum sp. B510 plasmid pAB510d, complete sequence) position: , mismatch: 1, identity: 0.955

caatccggcggcgccgccggca	CRISPR spacer
caattcggcggcgccgccggca	Protospacer
****.*****************

8. spacer 3.10|336936|24|NZ_CP012506|CRT matches to AWQW01000318 (Streptomyces niveus NCIMB 11891 plasmid pSniv4, complete sequence, whole genome shotgun sequence) position: , mismatch: 2, identity: 0.917

ccgttgccgatgagcccgccggcg	CRISPR spacer
ccggtgcggatgagcccgccggcg	Protospacer
*** *** ****************

9. spacer 6.2|1570896|22|NZ_CP012506|CRISPRCasFinder matches to NZ_CP032323 (Azospirillum brasilense strain MTCC4035 plasmid p2, complete sequence) position: , mismatch: 2, identity: 0.909

gttgccgattaggacggcggcc	CRISPR spacer
cttgccgatcaggacggcggcc	Protospacer
 ********.************

10. spacer 6.2|1570896|22|NZ_CP012506|CRISPRCasFinder matches to NZ_CP007795 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p2, complete sequence) position: , mismatch: 2, identity: 0.909

gttgccgattaggacggcggcc	CRISPR spacer
cttgccgatcaggacggcggcc	Protospacer
 ********.************

11. spacer 6.2|1570896|22|NZ_CP012506|CRISPRCasFinder matches to NZ_CP032341 (Azospirillum brasilense strain MTCC4038 plasmid p2, complete sequence) position: , mismatch: 2, identity: 0.909

gttgccgattaggacggcggcc	CRISPR spacer
cttgccgatcaggacggcggcc	Protospacer
 ********.************

12. spacer 6.2|1570896|22|NZ_CP012506|CRISPRCasFinder matches to NZ_CP032347 (Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence) position: , mismatch: 2, identity: 0.909

gttgccgattaggacggcggcc	CRISPR spacer
cttgccgatcaggacggcggcc	Protospacer
 ********.************

13. spacer 6.2|1570896|22|NZ_CP012506|CRISPRCasFinder matches to NZ_CP012916 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p2, complete sequence) position: , mismatch: 2, identity: 0.909

gttgccgattaggacggcggcc	CRISPR spacer
cttgccgatcaggacggcggcc	Protospacer
 ********.************

14. spacer 6.3|1570950|22|NZ_CP012506|CRISPRCasFinder matches to NZ_CP025510 (Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvD, complete sequence) position: , mismatch: 2, identity: 0.909

ggtaccgtcctcgccggcggtg	CRISPR spacer
ggcaccgtcctcgccggcggtt	Protospacer
**.******************

15. spacer 6.4|1571004|22|NZ_CP012506|CRISPRCasFinder matches to NZ_CP021032 (Rhizobium sp. NXC14 plasmid pRspNXC14b, complete sequence) position: , mismatch: 2, identity: 0.909

gtcgccgatcaggccggcggca	CRISPR spacer
atcgccgatcaggccggcggcc	Protospacer
.********************

16. spacer 6.4|1571004|22|NZ_CP012506|CRISPRCasFinder matches to NC_007765 (Rhizobium etli CFN 42 plasmid p42e, complete sequence) position: , mismatch: 2, identity: 0.909

gtcgccgatcaggccggcggca	CRISPR spacer
atcgccgatcaggccggcggcg	Protospacer
.********************.

17. spacer 6.4|1571004|22|NZ_CP012506|CRISPRCasFinder matches to NZ_CP021028 (Rhizobium sp. TAL182 plasmid pRetTAL182d, complete sequence) position: , mismatch: 2, identity: 0.909

gtcgccgatcaggccggcggca	CRISPR spacer
atcgccgatcaggccggcggcg	Protospacer
.********************.

18. spacer 6.4|1571004|22|NZ_CP012506|CRISPRCasFinder matches to NZ_CP013634 (Rhizobium sp. N324 plasmid pRspN324d, complete sequence) position: , mismatch: 2, identity: 0.909

gtcgccgatcaggccggcggca	CRISPR spacer
atcgccgatcaggccggcggcc	Protospacer
.********************

19. spacer 6.4|1571004|22|NZ_CP012506|CRISPRCasFinder matches to NZ_CP013503 (Rhizobium esperanzae strain N561 plasmid pRspN561c, complete sequence) position: , mismatch: 2, identity: 0.909

gtcgccgatcaggccggcggca	CRISPR spacer
atcgccgatcaggccggcggcg	Protospacer
.********************.

20. spacer 6.4|1571004|22|NZ_CP012506|CRISPRCasFinder matches to NZ_CP013509 (Rhizobium sp. N1341 plasmid pRspN1341d, complete sequence) position: , mismatch: 2, identity: 0.909

gtcgccgatcaggccggcggca	CRISPR spacer
atcgccgatcaggccggcggcg	Protospacer
.********************.

21. spacer 6.4|1571004|22|NZ_CP012506|CRISPRCasFinder matches to NZ_CP013520 (Rhizobium sp. N113 plasmid pRspN113c, complete sequence) position: , mismatch: 2, identity: 0.909

gtcgccgatcaggccggcggca	CRISPR spacer
atcgccgatcaggccggcggcg	Protospacer
.********************.

22. spacer 6.4|1571004|22|NZ_CP012506|CRISPRCasFinder matches to NZ_CP013493 (Rhizobium sp. N6212 plasmid pRspN6212c, complete sequence) position: , mismatch: 2, identity: 0.909

gtcgccgatcaggccggcggca	CRISPR spacer
atcgccgatcaggccggcggcg	Protospacer
.********************.

23. spacer 6.4|1571004|22|NZ_CP012506|CRISPRCasFinder matches to NZ_CP013516 (Rhizobium sp. N1314 plasmid pRspN1314e, complete sequence) position: , mismatch: 2, identity: 0.909

gtcgccgatcaggccggcggca	CRISPR spacer
atcgccgatcaggccggcggcg	Protospacer
.********************.

24. spacer 6.4|1571004|22|NZ_CP012506|CRISPRCasFinder matches to NZ_CP054616 (Azospirillum oryzae strain KACC 14407 plasmid unnamed2, complete sequence) position: , mismatch: 2, identity: 0.909

gtcgccgatcaggccggcggca	CRISPR spacer
gtcgccgatcaggccggcgggg	Protospacer
******************** .

25. spacer 6.4|1571004|22|NZ_CP012506|CRISPRCasFinder matches to NZ_CP012698 (Microbacterium sp. No. 7 plasmid A, complete sequence) position: , mismatch: 2, identity: 0.909

gtcgccgatcaggccggcggca	CRISPR spacer
accgccgatcaggccggcggca	Protospacer
..********************

26. spacer 6.4|1571004|22|NZ_CP012506|CRISPRCasFinder matches to NZ_CP013104 (Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence) position: , mismatch: 2, identity: 0.909

gtcgccgatcaggccggcggca	CRISPR spacer
ctcggcgatcaggccggcggca	Protospacer
 *** *****************

27. spacer 6.4|1571004|22|NZ_CP012506|CRISPRCasFinder matches to NZ_CP032323 (Azospirillum brasilense strain MTCC4035 plasmid p2, complete sequence) position: , mismatch: 2, identity: 0.909

gtcgccgatcaggccggcggca	CRISPR spacer
gtcgccgatccggccggcggct	Protospacer
********** **********

28. spacer 6.4|1571004|22|NZ_CP012506|CRISPRCasFinder matches to NZ_CP032325 (Azospirillum brasilense strain MTCC4035 plasmid p4, complete sequence) position: , mismatch: 2, identity: 0.909

gtcgccgatcaggccggcggca	CRISPR spacer
gtcgccgatcaggccgggggcc	Protospacer
***************** ***

29. spacer 6.4|1571004|22|NZ_CP012506|CRISPRCasFinder matches to NZ_CP022369 (Azospirillum sp. TSH58 plasmid TSH58_p05, complete sequence) position: , mismatch: 2, identity: 0.909

gtcgccgatcaggccggcggca	CRISPR spacer
gtcgccgatcaggccgggggcc	Protospacer
***************** ***

30. spacer 6.4|1571004|22|NZ_CP012506|CRISPRCasFinder matches to NZ_CP007794 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence) position: , mismatch: 2, identity: 0.909

gtcgccgatcaggccggcggca	CRISPR spacer
gtcgccgatccggccggcggct	Protospacer
********** **********

31. spacer 6.4|1571004|22|NZ_CP012506|CRISPRCasFinder matches to NC_013855 (Azospirillum sp. B510 plasmid pAB510a, complete sequence) position: , mismatch: 2, identity: 0.909

gtcgccgatcaggccggcggca	CRISPR spacer
gtcgccgatcaggccgggggcg	Protospacer
***************** ***.

32. spacer 6.4|1571004|22|NZ_CP012506|CRISPRCasFinder matches to NC_013857 (Azospirillum sp. B510 plasmid pAB510c, complete sequence) position: , mismatch: 2, identity: 0.909

gtcgccgatcaggccggcggca	CRISPR spacer
ggcgccgatcaggccggcggcc	Protospacer
* *******************

33. spacer 6.4|1571004|22|NZ_CP012506|CRISPRCasFinder matches to NZ_CP054029 (Rhizobium sp. JKLM19E plasmid pPR19E02, complete sequence) position: , mismatch: 2, identity: 0.909

gtcgccgatcaggccggcggca	CRISPR spacer
gtcgccgatcaggcctgcggcg	Protospacer
*************** *****.

34. spacer 6.4|1571004|22|NZ_CP012506|CRISPRCasFinder matches to NZ_CP032342 (Azospirillum brasilense strain MTCC4038 plasmid p3, complete sequence) position: , mismatch: 2, identity: 0.909

gtcgccgatcaggccggcggca	CRISPR spacer
gtcgccgatccggccggcggct	Protospacer
********** **********

35. spacer 6.4|1571004|22|NZ_CP012506|CRISPRCasFinder matches to NZ_CP024312 (Rhizobium sp. NXC24 plasmid pRspNXC24a, complete sequence) position: , mismatch: 2, identity: 0.909

gtcgccgatcaggccggcggca	CRISPR spacer
gtcgccgatcaggccggcgccg	Protospacer
******************* *.

36. spacer 6.4|1571004|22|NZ_CP012506|CRISPRCasFinder matches to CP042595 (Streptomyces albogriseolus strain LBX-2 plasmid pSALBX2, complete sequence) position: , mismatch: 2, identity: 0.909

gtcgccgatcaggccggcggca	CRISPR spacer
gtcgccgagcaggccggcggcc	Protospacer
******** ************

37. spacer 6.4|1571004|22|NZ_CP012506|CRISPRCasFinder matches to NZ_CP032349 (Azospirillum brasilense strain MTCC4039 plasmid p3, complete sequence) position: , mismatch: 2, identity: 0.909

gtcgccgatcaggccggcggca	CRISPR spacer
gtcgccgatcaggccgggggcc	Protospacer
***************** ***

38. spacer 6.5|1571058|25|NZ_CP012506|CRISPRCasFinder matches to NZ_CP032342 (Azospirillum brasilense strain MTCC4038 plasmid p3, complete sequence) position: , mismatch: 2, identity: 0.92

cttgccgaacacgccgaagccgtcg	CRISPR spacer
cttgccgaacccgccgaacccgtcg	Protospacer
********** ******* ******

39. spacer 6.5|1571058|25|NZ_CP012506|CRISPRCasFinder matches to NZ_CP033321 (Azospirillum brasilense strain Cd plasmid p3, complete sequence) position: , mismatch: 2, identity: 0.92

cttgccgaacacgccgaagccgtcg	CRISPR spacer
cttgccgaacccgccgaacccgtcg	Protospacer
********** ******* ******

40. spacer 6.5|1571058|25|NZ_CP012506|CRISPRCasFinder matches to NZ_CP033315 (Azospirillum brasilense strain Sp 7 plasmid p3, complete sequence) position: , mismatch: 2, identity: 0.92

cttgccgaacacgccgaagccgtcg	CRISPR spacer
cttgccgaacccgccgaacccgtcg	Protospacer
********** ******* ******

41. spacer 1.11|332485|27|NZ_CP012506|CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 3, identity: 0.889

ccgccgttggcgaacagtccgccgttg	CRISPR spacer
tcgccgttggcgatcagtccgccgtcg	Protospacer
.************ ***********.*

42. spacer 1.11|332485|27|NZ_CP012506|CRT matches to NZ_AP022607 (Mycobacterium branderi strain JCM 12687 plasmid pJCM12687) position: , mismatch: 3, identity: 0.889

ccgccgttggcgaacagtccgccgttg	CRISPR spacer
tcgccgttggcgatcagtccgccgtcg	Protospacer
.************ ***********.*

43. spacer 3.10|336936|24|NZ_CP012506|CRT matches to NC_003078 (Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence) position: , mismatch: 3, identity: 0.875

ccgttgccgatgagcccgccggcg	CRISPR spacer
ccgttgaggatgagcccgccggcc	Protospacer
******  ***************

44. spacer 3.10|336936|24|NZ_CP012506|CRT matches to NC_009339 (Mycolicibacterium gilvum PYR-GCK plasmid pMFLV01, complete sequence) position: , mismatch: 3, identity: 0.875

ccgttgccgatgagcccgccggcg	CRISPR spacer
gcgttgcggctgagcccgccggcg	Protospacer
 ****** * **************

45. spacer 3.10|336936|24|NZ_CP012506|CRT matches to NZ_CP019586 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence) position: , mismatch: 3, identity: 0.875

ccgttgccgatgagcccgccggcg	CRISPR spacer
ccgttgaggatgagcccgccggcc	Protospacer
******  ***************

46. spacer 3.10|336936|24|NZ_CP012506|CRT matches to NZ_CP015280 (Mycobacterium chimaera strain DSM 44623 plasmid unnamed 2, complete sequence) position: , mismatch: 3, identity: 0.875

ccgttgccgatgagcccgccggcg	CRISPR spacer
ccgtggccgaggagcccgccggcc	Protospacer
**** ***** ************

47. spacer 3.10|336936|24|NZ_CP012506|CRT matches to NZ_CP023153 (Mycobacterium chimaera strain FLAC0070 plasmid pFLAC0070_2, complete sequence) position: , mismatch: 3, identity: 0.875

ccgttgccgatgagcccgccggcg	CRISPR spacer
ccgtggccgaggagcccgccggcc	Protospacer
**** ***** ************

48. spacer 3.10|336936|24|NZ_CP012506|CRT matches to NZ_CP021799 (Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence) position: , mismatch: 3, identity: 0.875

ccgttgccgatgagcccgccggcg	CRISPR spacer
ccgttgaggatgagcccgccggcc	Protospacer
******  ***************

49. spacer 3.10|336936|24|NZ_CP012506|CRT matches to NZ_CP021828 (Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence) position: , mismatch: 3, identity: 0.875

ccgttgccgatgagcccgccggcg	CRISPR spacer
ccgttgaggatgagcccgccggcc	Protospacer
******  ***************

50. spacer 3.10|336936|24|NZ_CP012506|CRT matches to NZ_CP019224 (Mycobacterium chimaera strain CDC 2015-22-71 plasmid pDHQP20152271_1, complete sequence) position: , mismatch: 3, identity: 0.875

ccgttgccgatgagcccgccggcg	CRISPR spacer
ccgtggccgaggagcccgccggcc	Protospacer
**** ***** ************

51. spacer 3.10|336936|24|NZ_CP012506|CRT matches to NZ_CP021823 (Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence) position: , mismatch: 3, identity: 0.875

ccgttgccgatgagcccgccggcg	CRISPR spacer
ccgttgaggatgagcccgccggcc	Protospacer
******  ***************

52. spacer 3.10|336936|24|NZ_CP012506|CRT matches to NZ_CP021795 (Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence) position: , mismatch: 3, identity: 0.875

ccgttgccgatgagcccgccggcg	CRISPR spacer
ccgttgaggatgagcccgccggcc	Protospacer
******  ***************

53. spacer 3.10|336936|24|NZ_CP012506|CRT matches to NZ_CP021806 (Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence) position: , mismatch: 3, identity: 0.875

ccgttgccgatgagcccgccggcg	CRISPR spacer
ccgttgaggatgagcccgccggcc	Protospacer
******  ***************

54. spacer 3.10|336936|24|NZ_CP012506|CRT matches to NZ_CP019484 (Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence) position: , mismatch: 3, identity: 0.875

ccgttgccgatgagcccgccggcg	CRISPR spacer
ccgttgaggatgagcccgccggcc	Protospacer
******  ***************

55. spacer 3.10|336936|24|NZ_CP012506|CRT matches to NZ_CP019487 (Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence) position: , mismatch: 3, identity: 0.875

ccgttgccgatgagcccgccggcg	CRISPR spacer
ccgttgaggatgagcccgccggcc	Protospacer
******  ***************

56. spacer 3.10|336936|24|NZ_CP012506|CRT matches to NC_020560 (Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence) position: , mismatch: 3, identity: 0.875

ccgttgccgatgagcccgccggcg	CRISPR spacer
ccgttgaggatgagcccgccggcc	Protospacer
******  ***************

57. spacer 3.10|336936|24|NZ_CP012506|CRT matches to MT188704 (Mesorhizobium phage Cp1R7A-A1, complete genome) position: , mismatch: 3, identity: 0.875

ccgttgccgatgagcccgccggcg	CRISPR spacer
ccgttgccgatgcgcccgccgaca	Protospacer
************ ********.*.

58. spacer 3.10|336936|24|NZ_CP012506|CRT matches to KR080200 (Mycobacterium phage AlanGrant, complete genome) position: , mismatch: 3, identity: 0.875

ccgttgccgatgagcccgccggcg	CRISPR spacer
tcgttgccgatgaccccgccgccg	Protospacer
.************ ******* **

59. spacer 3.10|336936|24|NZ_CP012506|CRT matches to KR080194 (Mycobacterium phage Vincenzo, complete genome) position: , mismatch: 3, identity: 0.875

ccgttgccgatgagcccgccggcg	CRISPR spacer
tcgttgccgatgaccccgccgccg	Protospacer
.************ ******* **

60. spacer 3.10|336936|24|NZ_CP012506|CRT matches to NC_019849 (Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence) position: , mismatch: 3, identity: 0.875

ccgttgccgatgagcccgccggcg	CRISPR spacer
ccgttgaggatgagcccgccggcc	Protospacer
******  ***************

61. spacer 3.10|336936|24|NZ_CP012506|CRT matches to NZ_LT703507 (Mycobacterium chimaera strain Mycobacterium chimaera MC045 isolate Mycobacterium chimaera plasmid 3) position: , mismatch: 3, identity: 0.875

ccgttgccgatgagcccgccggcg	CRISPR spacer
ccgtggccgaggagcccgccggcc	Protospacer
**** ***** ************

62. spacer 3.10|336936|24|NZ_CP012506|CRT matches to NZ_CP015273 (Mycobacterium chimaera strain ZUERICH-1 plasmid unnamed 1, complete sequence) position: , mismatch: 3, identity: 0.875

ccgttgccgatgagcccgccggcg	CRISPR spacer
ccgtggccgaggagcccgccggcc	Protospacer
**** ***** ************

63. spacer 3.10|336936|24|NZ_CP012506|CRT matches to NC_017326 (Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence) position: , mismatch: 3, identity: 0.875

ccgttgccgatgagcccgccggcg	CRISPR spacer
ccgttgaggatgagcccgccggcc	Protospacer
******  ***************

64. spacer 3.10|336936|24|NZ_CP012506|CRT matches to NC_017323 (Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence) position: , mismatch: 3, identity: 0.875

ccgttgccgatgagcccgccggcg	CRISPR spacer
ccgttgaggatgagcccgccggcc	Protospacer
******  ***************

65. spacer 3.10|336936|24|NZ_CP012506|CRT matches to NZ_CP009146 (Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence) position: , mismatch: 3, identity: 0.875

ccgttgccgatgagcccgccggcg	CRISPR spacer
ccgttgaggatgagcccgccggcc	Protospacer
******  ***************

66. spacer 3.10|336936|24|NZ_CP012506|CRT matches to NC_018701 (Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence) position: , mismatch: 3, identity: 0.875

ccgttgccgatgagcccgccggcg	CRISPR spacer
ccgttgaggatgagcccgccggcc	Protospacer
******  ***************

67. spacer 3.10|336936|24|NZ_CP012506|CRT matches to NZ_CP029333 (Mycobacterium avium subsp. hominissuis strain MAC109 plasmid pMAC109a, complete sequence) position: , mismatch: 3, identity: 0.875

ccgttgccgatgagcccgccggcg	CRISPR spacer
ccgtggccgaggagcccgccggcc	Protospacer
**** ***** ************

68. spacer 3.10|336936|24|NZ_CP012506|CRT matches to NZ_CP021802 (Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence) position: , mismatch: 3, identity: 0.875

ccgttgccgatgagcccgccggcg	CRISPR spacer
ccgttgaggatgagcccgccggcc	Protospacer
******  ***************

69. spacer 3.10|336936|24|NZ_CP012506|CRT matches to NC_017957 (Tistrella mobilis KA081020-065 plasmid pTM1, complete sequence) position: , mismatch: 3, identity: 0.875

ccgttgccgatgagcccgccggcg	CRISPR spacer
ccgatgccgatgatcccgccggcc	Protospacer
*** ********* *********

70. spacer 3.10|336936|24|NZ_CP012506|CRT matches to NZ_CP021820 (Sinorhizobium meliloti strain M162 plasmid psymB, complete sequence) position: , mismatch: 3, identity: 0.875

ccgttgccgatgagcccgccggcg	CRISPR spacer
ccgttgaggatgagcccgccggcc	Protospacer
******  ***************

71. spacer 3.10|336936|24|NZ_CP012506|CRT matches to NZ_CP021831 (Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence) position: , mismatch: 3, identity: 0.875

ccgttgccgatgagcccgccggcg	CRISPR spacer
ccgttgaggatgagcccgccggcc	Protospacer
******  ***************

72. spacer 3.10|336936|24|NZ_CP012506|CRT matches to NZ_CP021814 (Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence) position: , mismatch: 3, identity: 0.875

ccgttgccgatgagcccgccggcg	CRISPR spacer
ccgttgaggatgagcccgccggcc	Protospacer
******  ***************

73. spacer 3.10|336936|24|NZ_CP012506|CRT matches to NZ_CP021810 (Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence) position: , mismatch: 3, identity: 0.875

ccgttgccgatgagcccgccggcg	CRISPR spacer
ccgttgaggatgagcccgccggcc	Protospacer
******  ***************

74. spacer 3.10|336936|24|NZ_CP012506|CRT matches to NZ_CP021218 (Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence) position: , mismatch: 3, identity: 0.875

ccgttgccgatgagcccgccggcg	CRISPR spacer
ccgttgaggatgagcccgccggcc	Protospacer
******  ***************

75. spacer 3.10|336936|24|NZ_CP012506|CRT matches to NC_008703 (Mycobacterium sp. KMS plasmid pMKMS01, complete sequence) position: , mismatch: 3, identity: 0.875

ccgttgccgatgagcccgccggcg	CRISPR spacer
gcgttgcggctgagcccgccggcg	Protospacer
 ****** * **************

76. spacer 3.10|336936|24|NZ_CP012506|CRT matches to NZ_CP026527 (Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence) position: , mismatch: 3, identity: 0.875

ccgttgccgatgagcccgccggcg	CRISPR spacer
ccgttgaggatgagcccgccggcc	Protospacer
******  ***************

77. spacer 3.10|336936|24|NZ_CP012506|CRT matches to NZ_CP021083 (Deinococcus ficus strain CC-FR2-10 plasmid pDFI2, complete sequence) position: , mismatch: 3, identity: 0.875

ccgttgccgatgagcccgccggcg	CRISPR spacer
tcgttgccgatcagcccgcgggcg	Protospacer
.********** ******* ****

78. spacer 3.10|336936|24|NZ_CP012506|CRT matches to NZ_CP045964 (Mycobacterium chimaera strain AUSMDU00007395 plasmid pAUSMDU00007395_01, complete sequence) position: , mismatch: 3, identity: 0.875

ccgttgccgatgagcccgccggcg	CRISPR spacer
ccgtggccgaggagcccgccggcc	Protospacer
**** ***** ************

79. spacer 3.10|336936|24|NZ_CP012506|CRT matches to NC_022654 (Mycobacterium kansasii ATCC 12478 plasmid pMK12478, complete sequence) position: , mismatch: 3, identity: 0.875

ccgttgccgatgagcccgccggcg	CRISPR spacer
ccgtggccgaggagcccgccggcc	Protospacer
**** ***** ************

80. spacer 6.4|1571004|22|NZ_CP012506|CRISPRCasFinder matches to NZ_KY349138 (Mycolicibacterium sp. CBMA 213 plasmid pCBMA213_2, complete sequence) position: , mismatch: 3, identity: 0.864

gtcgccgatcaggccggcggca	CRISPR spacer
gtcgccgatcaggccggcgcgg	Protospacer
*******************  .

81. spacer 6.4|1571004|22|NZ_CP012506|CRISPRCasFinder matches to NZ_CP021649 (Acidovorax sp. T1 plasmid p1-T1, complete sequence) position: , mismatch: 3, identity: 0.864

gtcgccgatcaggccggcggca	CRISPR spacer
ttcgccgatcaggccggcggtg	Protospacer
 *******************..

82. spacer 6.5|1571058|25|NZ_CP012506|CRISPRCasFinder matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 3, identity: 0.88

cttgccgaacacgccgaagccgtcg	CRISPR spacer
ctcgccgaacacgcggaagccgtct	Protospacer
**.*********** *********

83. spacer 6.5|1571058|25|NZ_CP012506|CRISPRCasFinder matches to NZ_CP022999 (Rhizobium sp. 11515TR strain 10195 plasmid p11515TR-A, complete sequence) position: , mismatch: 3, identity: 0.88

cttgccgaacacgccgaagccgtcg	CRISPR spacer
attgtcgaacacgcggaagccgtcg	Protospacer
 ***.********* **********

84. spacer 6.5|1571058|25|NZ_CP012506|CRISPRCasFinder matches to MN586053 (Arthrobacter phage BeatusComedenti, complete genome) position: , mismatch: 3, identity: 0.88

cttgccgaacacgccgaagccgtcg	CRISPR spacer
gttgccgaactcgccgaagccgttg	Protospacer
 ********* ************.*

85. spacer 6.5|1571058|25|NZ_CP012506|CRISPRCasFinder matches to NC_031254 (Arthrobacter phage Kitkat, complete genome) position: , mismatch: 3, identity: 0.88

cttgccgaacacgccgaagccgtcg	CRISPR spacer
gttgccgaactcgccgaagccgttg	Protospacer
 ********* ************.*

86. spacer 6.5|1571058|25|NZ_CP012506|CRISPRCasFinder matches to NC_031231 (Arthrobacter phage KellEzio, complete genome) position: , mismatch: 3, identity: 0.88

cttgccgaacacgccgaagccgtcg	CRISPR spacer
gttgccgaactcgccgaagccgttg	Protospacer
 ********* ************.*

87. spacer 6.5|1571058|25|NZ_CP012506|CRISPRCasFinder matches to NC_021289 (Burkholderia insecticola plasmid p1, complete sequence) position: , mismatch: 3, identity: 0.88

cttgccgaacacgccgaagccgtcg	CRISPR spacer
catgcggaacacgccgaatccgtcg	Protospacer
* *** ************ ******

88. spacer 6.5|1571058|25|NZ_CP012506|CRISPRCasFinder matches to NZ_CP030129 (Indioceanicola profundi strain SCSIO 08040 plasmid unnamed3, complete sequence) position: , mismatch: 3, identity: 0.88

cttgccgaacacgccgaagccgtcg	CRISPR spacer
cttgccgatcacgccgtagccgttg	Protospacer
******** ******* ******.*

89. spacer 6.15|1571823|22|NZ_CP012506|CRISPRCasFinder matches to NC_008270 (Rhodococcus jostii RHA1 plasmid pRHL2, complete sequence) position: , mismatch: 3, identity: 0.864

caatccggcggcgccgccggca	CRISPR spacer
gaatccggcggcgccgccgggc	Protospacer
 *******************

90. spacer 7.5|2071202|24|NZ_CP012506|CRT matches to NZ_CP049158 (Caballeronia sp. SBC1 plasmid pSBC1_2, complete sequence) position: , mismatch: 3, identity: 0.875

atcgaagaagctgaacccgccgtt	CRISPR spacer
cgcgaagaagctgaagccgccgtt	Protospacer
  ************* ********

91. spacer 7.5|2071202|24|NZ_CP012506|CRT matches to NZ_CP049318 (Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence) position: , mismatch: 3, identity: 0.875

atcgaagaagctgaacccgccgtt	CRISPR spacer
cgcgaagaagctgaagccgccgtt	Protospacer
  ************* ********

92. spacer 3.10|336936|24|NZ_CP012506|CRT matches to NZ_CP046573 (Rhodococcus sp. WAY2 plasmid pRWAY01, complete sequence) position: , mismatch: 4, identity: 0.833

ccgttgccgatgagcccgccggcg	CRISPR spacer
gctgcgccgatgagcccgccggcg	Protospacer
 *  .*******************

93. spacer 4.1|364855|27|NZ_CP012506|CRISPRCasFinder matches to NC_023591 (Mycobacterium phage Adler, complete genome) position: , mismatch: 4, identity: 0.852

-aacgcaccggtgtccacatcgcccgtg	CRISPR spacer
cagtgc-ccggtgtccccatcgcccgtg	Protospacer
 *..** ********* ***********

94. spacer 4.1|364855|27|NZ_CP012506|CRISPRCasFinder matches to KF981876 (UNVERIFIED: Mycobacterium phage ADLER F1725, complete genome) position: , mismatch: 4, identity: 0.852

-aacgcaccggtgtccacatcgcccgtg	CRISPR spacer
cagtgc-ccggtgtccccatcgcccgtg	Protospacer
 *..** ********* ***********

95. spacer 4.7|365251|27|NZ_CP012506|CRISPRCasFinder matches to NZ_CP022363 (Azospirillum sp. TSH58 plasmid TSH58_p03, complete sequence) position: , mismatch: 4, identity: 0.852

gcgaagccgatgttgtagctgccggtg	CRISPR spacer
ccgaagccgatgtcgtagcggccggcg	Protospacer
 ************.***** *****.*

96. spacer 4.10|365461|27|NZ_CP012506|CRISPRCasFinder matches to NZ_CP030864 (Streptomyces globosus strain LZH-48 plasmid unnamed2, complete sequence) position: , mismatch: 4, identity: 0.852

accccgccgaagttgaggtcgccgagg	CRISPR spacer
gcgccgccgaaggtgaggtcgccgggg	Protospacer
.* ********* ***********.**

97. spacer 4.10|365461|27|NZ_CP012506|CRISPRCasFinder matches to NC_016652 (Rhodococcus phage REQ2, complete genome) position: , mismatch: 4, identity: 0.852

accccgccgaagttgaggtcgccgagg	CRISPR spacer
acggcgccgaagttgaggccgccgacg	Protospacer
**  **************.****** *

98. spacer 6.1|1570836|28|NZ_CP012506|CRISPRCasFinder matches to NZ_CP027859 (Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence) position: , mismatch: 4, identity: 0.857

gttgccgggggtgccatcgttgccggcc	CRISPR spacer
gccgccgggggtgccctcgttgccgggc	Protospacer
*..************ ********** *

99. spacer 6.1|1570836|28|NZ_CP012506|CRISPRCasFinder matches to NZ_CP032054 (Streptomyces clavuligerus strain F1D-5 plasmid pSCL1, complete sequence) position: , mismatch: 4, identity: 0.857

gttgccgggggtgccatcgttgccggcc	CRISPR spacer
gccgccgggggtgccctcgttgccgggc	Protospacer
*..************ ********** *

100. spacer 6.1|1570836|28|NZ_CP012506|CRISPRCasFinder matches to NZ_CP016560 (Streptomyces clavuligerus strain F613-1 plasmid pSCL4, complete sequence) position: , mismatch: 4, identity: 0.857

gttgccgggggtgccatcgttgccggcc	CRISPR spacer
gccgccgggggtgccctcgttgccgggc	Protospacer
*..************ ********** *

101. spacer 6.5|1571058|25|NZ_CP012506|CRISPRCasFinder matches to NZ_CP021372 (Rhizobium sp. ACO-34A plasmid pRACO34Ad, complete sequence) position: , mismatch: 4, identity: 0.84

cttgccgaacacgccgaagccgtcg	CRISPR spacer
tccgccgaacgcgccgaagccgtcg	Protospacer
...*******.**************

102. spacer 6.5|1571058|25|NZ_CP012506|CRISPRCasFinder matches to LR134127 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 7) position: , mismatch: 4, identity: 0.84

cttgccgaacacgccgaagccgtcg	CRISPR spacer
gctgccgaacacgccgatgccgacg	Protospacer
 .*************** **** **

103. spacer 6.5|1571058|25|NZ_CP012506|CRISPRCasFinder matches to LR134127 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 7) position: , mismatch: 4, identity: 0.84

cttgccgaacacgccgaagccgtcg	CRISPR spacer
gctgccgaacacgccgatgccgacg	Protospacer
 .*************** **** **

104. spacer 6.5|1571058|25|NZ_CP012506|CRISPRCasFinder matches to MT553342 (Microbacterium phage Kelcole, complete genome) position: , mismatch: 4, identity: 0.84

cttgccgaacacgccgaagccgtcg	CRISPR spacer
gatgctgatcacgccgaagccgtcg	Protospacer
  ***.** ****************

105. spacer 6.5|1571058|25|NZ_CP012506|CRISPRCasFinder matches to NC_048068 (Microbacterium phage OneinaGillian, complete genome) position: , mismatch: 4, identity: 0.84

cttgccgaacacgccgaagccgtcg	CRISPR spacer
gatgctgatcacgccgaagccgtcg	Protospacer
  ***.** ****************

106. spacer 6.5|1571058|25|NZ_CP012506|CRISPRCasFinder matches to MT310894 (Microbacterium phage Tempo, complete genome) position: , mismatch: 4, identity: 0.84

cttgccgaacacgccgaagccgtcg	CRISPR spacer
gatgctgatcacgccgaagccgtcg	Protospacer
  ***.** ****************

107. spacer 6.5|1571058|25|NZ_CP012506|CRISPRCasFinder matches to NZ_CP047175 (Rathayibacter sp. VKM Ac-2760 plasmid unnamed2, complete sequence) position: , mismatch: 4, identity: 0.84

cttgccgaacacgccgaagccgtcg	CRISPR spacer
cttgccgaacacgccgatgccctgc	Protospacer
***************** *** *

108. spacer 6.5|1571058|25|NZ_CP012506|CRISPRCasFinder matches to NZ_CP013631 (Rhizobium sp. N324 plasmid pRspN324a, complete sequence) position: , mismatch: 4, identity: 0.84

cttgccgaacacgccgaagccgtcg	CRISPR spacer
aatgccgaattcgccgaagccgtcg	Protospacer
  *******. **************

109. spacer 6.5|1571058|25|NZ_CP012506|CRISPRCasFinder matches to MN034284 (Leviviridae sp. isolate H2_Rhizo_Litter_49_scaffold_25938 sequence) position: , mismatch: 4, identity: 0.84

cttgccgaacacgccgaagccgtcg	CRISPR spacer
cccgtagaacacgccgaagccgtcg	Protospacer
*..*. *******************

110. spacer 6.14|1571766|25|NZ_CP012506|CRISPRCasFinder matches to MN582064 (Podoviridae sp. ctka020, complete genome) position: , mismatch: 4, identity: 0.84

cttgccgccaccgacccccccttgc	CRISPR spacer
ttttccgacaccgacccccccttga	Protospacer
.** *** ****************

111. spacer 7.5|2071202|24|NZ_CP012506|CRT matches to NZ_CP028348 (Novosphingobium sp. THN1 plasmid pTHN, complete sequence) position: , mismatch: 4, identity: 0.833

atcgaagaagctgaacccgccgtt	CRISPR spacer
atcgaagaagctgaacacgcccgc	Protospacer
**************** ****  .

112. spacer 7.5|2071202|24|NZ_CP012506|CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 4, identity: 0.833

atcgaagaagctgaacccgccgtt	CRISPR spacer
gtcgatgaagctgaacccgccgaa	Protospacer
.**** ****************

113. spacer 7.5|2071202|24|NZ_CP012506|CRT matches to NZ_CP015007 (Aminobacter aminovorans strain KCTC 2477 plasmid pAA02, complete sequence) position: , mismatch: 4, identity: 0.833

atcgaagaagctgaacccgccgtt	CRISPR spacer
atcggagaagctgaacccgcccgg	Protospacer
****.****************

114. spacer 1.2|332005|27|NZ_CP012506|CRT matches to MN103533 (Mycobacterium phage Weirdo19, complete genome) position: , mismatch: 5, identity: 0.815

ccggcgcctagagcgttggcaccgctg	CRISPR spacer
ctcgggcctagagcgttggcaccgtgg	Protospacer
*. * *******************. *

115. spacer 1.11|332485|27|NZ_CP012506|CRT matches to MK415400 (Phage apr34_1784, complete genome) position: , mismatch: 5, identity: 0.815

ccgccgttggcgaacagtccgccgttg	CRISPR spacer
ccgccgttggcgaccagtccgcaatca	Protospacer
************* ******** .*..

116. spacer 1.11|332485|27|NZ_CP012506|CRT matches to NZ_CP031166 (Euzebya sp. DY32-46 plasmid pEDY32-46I, complete sequence) position: , mismatch: 5, identity: 0.815

ccgccgttggcgaacagtccgccgttg	CRISPR spacer
gggtcgtcggagaacagtccgccgttg	Protospacer
  *.***.** ****************

117. spacer 1.11|332485|27|NZ_CP012506|CRT matches to NC_011987 (Agrobacterium radiobacter K84 plasmid pAtK84c, complete sequence) position: , mismatch: 5, identity: 0.815

ccgccgttggcgaacagtccgccgttg	CRISPR spacer
gtggcgttgtcgaacagaccgccgttg	Protospacer
 .* ***** ******* *********

118. spacer 1.12|332530|30|NZ_CP012506|CRT matches to NC_013858 (Azospirillum sp. B510 plasmid pAB510d, complete sequence) position: , mismatch: 5, identity: 0.833

ccggccgggacaccgccagcggcgccgtgg	CRISPR spacer
ccggccgggtcaccgccagcggggccagga	Protospacer
********* ************ ***. *.

119. spacer 1.12|332530|30|NZ_CP012506|CRT matches to KM389325 (UNVERIFIED: Pseudomonas phage F_ET2439sp/ET602 clone ctg7180000000169 genomic sequence) position: , mismatch: 5, identity: 0.833

ccggccgggacaccgccagcggcgccgtgg	CRISPR spacer
ccgatccagacaccgccagcggcgccgagg	Protospacer
***..* .******************* **

120. spacer 1.12|332530|30|NZ_CP012506|CRT matches to NZ_CP030074 (Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.833

ccggccgggacaccgccagcggcg-ccgtgg	CRISPR spacer
ccggccgggacaccgcccccggcgagcgcg-	Protospacer
*****************  *****  **.*

121. spacer 1.12|332530|30|NZ_CP012506|CRT matches to NZ_CP049701 (Bradyrhizobium sp. 1S5 strain 323S2 plasmid pB323S2b, complete sequence) position: , mismatch: 5, identity: 0.833

--ccggccgggacaccgccagcggcgccgtgg	CRISPR spacer
gcctggcc--gacagcgccagcggcgccgtgc	Protospacer
  *.****  **** ****************

122. spacer 1.12|332530|30|NZ_CP012506|CRT matches to NZ_CP049701 (Bradyrhizobium sp. 1S5 strain 323S2 plasmid pB323S2b, complete sequence) position: , mismatch: 5, identity: 0.833

--ccggccgggacaccgccagcggcgccgtgg	CRISPR spacer
gcctggcc--gacagcgccagcggcgccgtgc	Protospacer
  *.****  **** ****************

123. spacer 1.12|332530|30|NZ_CP012506|CRT matches to NZ_CP049701 (Bradyrhizobium sp. 1S5 strain 323S2 plasmid pB323S2b, complete sequence) position: , mismatch: 5, identity: 0.833

--ccggccgggacaccgccagcggcgccgtgg	CRISPR spacer
gcctggcc--gacagcgccagcggcgccgtgc	Protospacer
  *.****  **** ****************

124. spacer 4.1|364855|27|NZ_CP012506|CRISPRCasFinder matches to LR794124 (Vibrio phage vB_Vc_SrVc9 genome assembly, chromosome: 1) position: , mismatch: 5, identity: 0.815

aacgcaccggtgtccacatcgcccgtg	CRISPR spacer
aacgcaccgttgtccacatcaccaatc	Protospacer
********* **********.** .*

125. spacer 4.1|364855|27|NZ_CP012506|CRISPRCasFinder matches to NC_012662 (Vibrio phage VP93, complete genome) position: , mismatch: 5, identity: 0.815

aacgcaccggtgtccacatcgcccgtg	CRISPR spacer
aacgcaccgttgtccacatcaccaatc	Protospacer
********* **********.** .*

126. spacer 4.7|365251|27|NZ_CP012506|CRISPRCasFinder matches to NZ_CP016084 (Streptomyces sp. SAT1 plasmid unnamed4, complete sequence) position: , mismatch: 5, identity: 0.815

gcgaagccgatgttgtagctgccggtg	CRISPR spacer
gcgaagccgaagttgtagctgcgctcg	Protospacer
********** ***********   .*

127. spacer 4.7|365251|27|NZ_CP012506|CRISPRCasFinder matches to MN693945 (Marine virus AFVG_250M952, complete genome) position: , mismatch: 5, identity: 0.815

gcgaagccgatgttgtagctgccggtg	CRISPR spacer
atgaagccgatgttgtcgctaccgggg	Protospacer
..************** ***.**** *

128. spacer 4.10|365461|27|NZ_CP012506|CRISPRCasFinder matches to NZ_CP020899 (Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRphaBra5c, complete sequence) position: , mismatch: 5, identity: 0.815

accccgccgaagttgaggtcgccgagg	CRISPR spacer
gcgccgccgatgttgagggcgccgagt	Protospacer
.* ******* ******* *******

129. spacer 4.10|365461|27|NZ_CP012506|CRISPRCasFinder matches to NZ_CP013525 (Rhizobium phaseoli strain R744 plasmid pRphaR744c, complete sequence) position: , mismatch: 5, identity: 0.815

accccgccgaagttgaggtcgccgagg	CRISPR spacer
gcgccgccgatgttgagggcgccgagt	Protospacer
.* ******* ******* *******

130. spacer 4.10|365461|27|NZ_CP012506|CRISPRCasFinder matches to NZ_CP013554 (Rhizobium phaseoli strain N931 plasmid pRphaN931b, complete sequence) position: , mismatch: 5, identity: 0.815

accccgccgaagttgaggtcgccgagg	CRISPR spacer
gcgccgccgatgttgagggcgccgagt	Protospacer
.* ******* ******* *******

131. spacer 4.10|365461|27|NZ_CP012506|CRISPRCasFinder matches to NZ_CP015368 (Methylobacterium phyllosphaerae strain CBMB27 plasmid CBMB27-p1, complete sequence) position: , mismatch: 5, identity: 0.815

accccgccgaagttgaggtcgccgagg	CRISPR spacer
tccccgcggaagttgaggtcgcgggtg	Protospacer
 ****** ************** *. *

132. spacer 4.10|365461|27|NZ_CP012506|CRISPRCasFinder matches to NZ_CP013588 (Rhizobium phaseoli strain N161 plasmid pRphaN161c, complete sequence) position: , mismatch: 5, identity: 0.815

accccgccgaagttgaggtcgccgagg	CRISPR spacer
gcgccgccgatgttgagggcgccgagt	Protospacer
.* ******* ******* *******

133. spacer 4.10|365461|27|NZ_CP012506|CRISPRCasFinder matches to NZ_CP013560 (Rhizobium phaseoli strain N841 plasmid pRphaN841c, complete sequence) position: , mismatch: 5, identity: 0.815

accccgccgaagttgaggtcgccgagg	CRISPR spacer
gcgccgccgatgttgagggcgccgagt	Protospacer
.* ******* ******* *******

134. spacer 4.10|365461|27|NZ_CP012506|CRISPRCasFinder matches to NZ_CP013577 (Rhizobium phaseoli strain N671 plasmid pRphaN671c, complete sequence) position: , mismatch: 5, identity: 0.815

accccgccgaagttgaggtcgccgagg	CRISPR spacer
gcgccgccgatgttgagggcgccgagt	Protospacer
.* ******* ******* *******

135. spacer 4.10|365461|27|NZ_CP012506|CRISPRCasFinder matches to NZ_CP013549 (Rhizobium phaseoli strain R611 plasmid pRetR611b, complete sequence) position: , mismatch: 5, identity: 0.815

accccgccgaagttgaggtcgccgagg	CRISPR spacer
gcgccgccgatgttgagggcgccgagt	Protospacer
.* ******* ******* *******

136. spacer 4.10|365461|27|NZ_CP012506|CRISPRCasFinder matches to NZ_CP013529 (Rhizobium phaseoli strain R723 plasmid pRphaR723b, complete sequence) position: , mismatch: 5, identity: 0.815

accccgccgaagttgaggtcgccgagg	CRISPR spacer
gcgccgccgatgttgagggcgccgagt	Protospacer
.* ******* ******* *******

137. spacer 4.10|365461|27|NZ_CP012506|CRISPRCasFinder matches to NZ_CP013534 (Rhizobium phaseoli strain R650 plasmid pRphaR650b, complete sequence) position: , mismatch: 5, identity: 0.815

accccgccgaagttgaggtcgccgagg	CRISPR spacer
gcgccgccgatgttgagggcgccgagt	Protospacer
.* ******* ******* *******

138. spacer 4.10|365461|27|NZ_CP012506|CRISPRCasFinder matches to NZ_CP013539 (Rhizobium phaseoli strain R630 plasmid pRphaR630b, complete sequence) position: , mismatch: 5, identity: 0.815

accccgccgaagttgaggtcgccgagg	CRISPR spacer
gcgccgccgatgttgagggcgccgagt	Protospacer
.* ******* ******* *******

139. spacer 4.10|365461|27|NZ_CP012506|CRISPRCasFinder matches to NZ_CP013545 (Rhizobium phaseoli strain R620 plasmid pRphaR620c, complete sequence) position: , mismatch: 5, identity: 0.815

accccgccgaagttgaggtcgccgagg	CRISPR spacer
gcgccgccgatgttgagggcgccgagt	Protospacer
.* ******* ******* *******

140. spacer 4.10|365461|27|NZ_CP012506|CRISPRCasFinder matches to NZ_CP020444 (Paracoccus yeei strain FDAARGOS_252 plasmid unnamed4, complete sequence) position: , mismatch: 5, identity: 0.815

accccgccgaagttgaggtcgccgagg	CRISPR spacer
tcaccgccgaagttgaagtggccgagc	Protospacer
 * *************.** ******

141. spacer 4.10|365461|27|NZ_CP012506|CRISPRCasFinder matches to NZ_CP013565 (Rhizobium phaseoli strain N831 plasmid pRphaN831b, complete sequence) position: , mismatch: 5, identity: 0.815

accccgccgaagttgaggtcgccgagg	CRISPR spacer
gcgccgccgatgttgagggcgccgagt	Protospacer
.* ******* ******* *******

142. spacer 4.10|365461|27|NZ_CP012506|CRISPRCasFinder matches to NZ_CP013582 (Rhizobium phaseoli strain N261 plasmid pRphaN261b, complete sequence) position: , mismatch: 5, identity: 0.815

accccgccgaagttgaggtcgccgagg	CRISPR spacer
gcgccgccgatgttgagggcgccgagt	Protospacer
.* ******* ******* *******

143. spacer 4.10|365461|27|NZ_CP012506|CRISPRCasFinder matches to NZ_CP013571 (Rhizobium phaseoli strain N771 plasmid pRphaN771c, complete sequence) position: , mismatch: 5, identity: 0.815

accccgccgaagttgaggtcgccgagg	CRISPR spacer
gcgccgccgatgttgagggcgccgagt	Protospacer
.* ******* ******* *******

144. spacer 4.10|365461|27|NZ_CP012506|CRISPRCasFinder matches to NZ_CP044078 (Paracoccus yeei strain FDAARGOS_643 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.815

accccgccgaagttgaggtcgccgagg	CRISPR spacer
tcaccgccgaagttgaagtggccgagc	Protospacer
 * *************.** ******

145. spacer 4.10|365461|27|NZ_CP012506|CRISPRCasFinder matches to NZ_CP031081 (Paracoccus yeei strain CCUG 32053 plasmid pYEE3, complete sequence) position: , mismatch: 5, identity: 0.815

accccgccgaagttgaggtcgccgagg	CRISPR spacer
tcaccgccgaagttgaagtggccgagc	Protospacer
 * *************.** ******

146. spacer 4.10|365461|27|NZ_CP012506|CRISPRCasFinder matches to MN586031 (Gordonia phage Gambino, complete genome) position: , mismatch: 5, identity: 0.815

accccgccgaagttgaggtcgccgagg	CRISPR spacer
tcgacgccgaagttgatgtcgacgagg	Protospacer
 *  ************ **** *****

147. spacer 4.10|365461|27|NZ_CP012506|CRISPRCasFinder matches to KU998236 (Gordonia phage Blueberry, complete genome) position: , mismatch: 5, identity: 0.815

accccgccgaagttgaggtcgccgagg	CRISPR spacer
tcgacgccgaagttgatgtcgacgagg	Protospacer
 *  ************ **** *****

148. spacer 4.10|365461|27|NZ_CP012506|CRISPRCasFinder matches to MN062704 (Gordonia phage JuJu, complete genome) position: , mismatch: 5, identity: 0.815

accccgccgaagttgaggtcgccgagg	CRISPR spacer
tcgacgccgaagttgatgtcgacgagg	Protospacer
 *  ************ **** *****

149. spacer 4.10|365461|27|NZ_CP012506|CRISPRCasFinder matches to MK501729 (Gordonia phage Walrus, complete genome) position: , mismatch: 5, identity: 0.815

accccgccgaagttgaggtcgccgagg	CRISPR spacer
tcgacgccgaagttgatgtcgacgagg	Protospacer
 *  ************ **** *****

150. spacer 4.10|365461|27|NZ_CP012506|CRISPRCasFinder matches to NC_031226 (Gordonia phage BaxterFox, complete genome) position: , mismatch: 5, identity: 0.815

accccgccgaagttgaggtcgccgagg	CRISPR spacer
tcgacgccgaagttgatgtcgacgagg	Protospacer
 *  ************ **** *****

151. spacer 4.10|365461|27|NZ_CP012506|CRISPRCasFinder matches to MK967393 (Rhodococcus phage Whack, complete genome) position: , mismatch: 5, identity: 0.815

accccgccgaagttgaggtcgccgagg	CRISPR spacer
tccttaccgaagttgaggtcgacgagg	Protospacer
 **...*************** *****

152. spacer 4.10|365461|27|NZ_CP012506|CRISPRCasFinder matches to MT723935 (Gordonia phage Azula, complete genome) position: , mismatch: 5, identity: 0.815

accccgccgaagttgaggtcgccgagg	CRISPR spacer
tcgacgccgaagttgatgtcgacgagg	Protospacer
 *  ************ **** *****

153. spacer 4.10|365461|27|NZ_CP012506|CRISPRCasFinder matches to KU963249 (Gordonia phage Yeezy, complete genome) position: , mismatch: 5, identity: 0.815

accccgccgaagttgaggtcgccgagg	CRISPR spacer
tcgacgccgaagttgatgtcgacgagg	Protospacer
 *  ************ **** *****

154. spacer 4.10|365461|27|NZ_CP012506|CRISPRCasFinder matches to MH153808 (Gordonia phage Petra, complete genome) position: , mismatch: 5, identity: 0.815

accccgccgaagttgaggtcgccgagg	CRISPR spacer
tcgacgccgaagttgatgtcgacgagg	Protospacer
 *  ************ **** *****

155. spacer 4.10|365461|27|NZ_CP012506|CRISPRCasFinder matches to MT639650 (Gordonia phage Ohgeesy, complete genome) position: , mismatch: 5, identity: 0.815

accccgccgaagttgaggtcgccgagg	CRISPR spacer
tcgacgccgaagttgatgtcgacgagg	Protospacer
 *  ************ **** *****

156. spacer 4.10|365461|27|NZ_CP012506|CRISPRCasFinder matches to MH536818 (Gordonia phage Frokostdame, complete genome) position: , mismatch: 5, identity: 0.815

accccgccgaagttgaggtcgccgagg	CRISPR spacer
tcgacgccgaagttgatgtcgacgagg	Protospacer
 *  ************ **** *****

157. spacer 4.10|365461|27|NZ_CP012506|CRISPRCasFinder matches to KX557275 (Gordonia phage CarolAnn, complete genome) position: , mismatch: 5, identity: 0.815

accccgccgaagttgaggtcgccgagg	CRISPR spacer
tcgacgccgaagttgatgtcgacgagg	Protospacer
 *  ************ **** *****

158. spacer 6.1|1570836|28|NZ_CP012506|CRISPRCasFinder matches to NZ_LN907828 (Erwinia gerundensis isolate E_g_EM595 plasmid pEM01, complete sequence) position: , mismatch: 5, identity: 0.821

gttgccgggggtgccatcgttgccggcc	CRISPR spacer
gctgccgtgggtgccatcgttgccgagt	Protospacer
*.***** *****************. .

159. spacer 6.1|1570836|28|NZ_CP012506|CRISPRCasFinder matches to KU728633 (Mycobacterium phage Bipper, complete genome) position: , mismatch: 5, identity: 0.821

gttgccgggggtgccatcgttgccggcc	CRISPR spacer
gcgtccgggggtgccgtcgttgccgtcc	Protospacer
*.  ***********.********* **

160. spacer 6.1|1570836|28|NZ_CP012506|CRISPRCasFinder matches to MK977701 (Mycobacterium phage Cracklewink, complete genome) position: , mismatch: 5, identity: 0.821

gttgccgggggtgccatcgttgccggcc	CRISPR spacer
gcgtccgggggtgccgtcgttgccgtcc	Protospacer
*.  ***********.********* **

161. spacer 6.1|1570836|28|NZ_CP012506|CRISPRCasFinder matches to NZ_CP016354 (Prauserella marina strain DSM 45268 plasmid pPmarDSM45268, complete sequence) position: , mismatch: 5, identity: 0.821

gttgccgggggtgccatcgttgccggcc	CRISPR spacer
gttgccgcgggtgccctcgttgcggacg	Protospacer
******* ******* ******* *.*

162. spacer 6.5|1571058|25|NZ_CP012506|CRISPRCasFinder matches to NZ_CP025013 (Rhizobium leguminosarum strain Norway plasmid pRLN1, complete sequence) position: , mismatch: 5, identity: 0.8

cttgccgaacacgccgaagccgtcg	CRISPR spacer
gccgccgaacacgccgaagccgttt	Protospacer
 ..********************.

163. spacer 6.5|1571058|25|NZ_CP012506|CRISPRCasFinder matches to NZ_CP020331 (Martelella mediterranea DSM 17316 strain MACL11 plasmid pMM593, complete sequence) position: , mismatch: 5, identity: 0.8

cttgccgaacacgccgaagccgtcg	CRISPR spacer
gttgccgaacacgccgacgccgcgc	Protospacer
 **************** ****.

164. spacer 6.10|1571451|31|NZ_CP012506|CRISPRCasFinder matches to NC_018746 (Pseudomonas putida ND6 plasmid pND6-2, complete sequence) position: , mismatch: 5, identity: 0.839

aattg--cgccttgcccgccgttgccgccggca	CRISPR spacer
--ttggccaccttgcacgcccttgccgccggca	Protospacer
  ***  *.****** **** ************

165. spacer 6.10|1571451|31|NZ_CP012506|CRISPRCasFinder matches to MN961671 (Pseudomonas aeruginosa strain 201330 plasmid p201330-IMP, complete sequence) position: , mismatch: 5, identity: 0.839

aattg--cgccttgcccgccgttgccgccggca	CRISPR spacer
--ttggccaccttgcacgcccttgccgccggca	Protospacer
  ***  *.****** **** ************

166. spacer 6.10|1571451|31|NZ_CP012506|CRISPRCasFinder matches to MN961672 (Pseudomonas aeruginosa strain PA15W plasmid pPA15W-NR, complete sequence) position: , mismatch: 5, identity: 0.839

aattg--cgccttgcccgccgttgccgccggca	CRISPR spacer
--ttggccaccttgcacgcccttgccgccggca	Protospacer
  ***  *.****** **** ************

167. spacer 6.13|1571700|34|NZ_CP012506|CRISPRCasFinder matches to NC_006362 (Nocardia farcinica IFM 10152 plasmid pNF1, complete sequence) position: , mismatch: 5, identity: 0.853

gtcgccgtgcagccagccaccaccgcca-ccggcg	CRISPR spacer
ttcgccgtgcagccggccaccacctccagcctgc-	Protospacer
 *************.********* *** ** **

168. spacer 1.3|332050|30|NZ_CP012506|CRT matches to NZ_CP018075 (Streptomyces venezuelae strain NRRL B-65442 plasmid, complete sequence) position: , mismatch: 6, identity: 0.8

ccggcggagccgaagagcaagccgccgttc	CRISPR spacer
tcagcggagccgaagatcacgccgccgagc	Protospacer
.*.************* ** *******  *

169. spacer 1.12|332530|30|NZ_CP012506|CRT matches to CP007644 (Rhizobium etli bv. phaseoli str. IE4803 plasmid pRetIE4803c, complete sequence) position: , mismatch: 6, identity: 0.8

ccggccgggacaccgccagcggcgccgtgg	CRISPR spacer
ccggccgggacaccggcatcggcgaaggcg	Protospacer
*************** ** *****  *  *

170. spacer 1.12|332530|30|NZ_CP012506|CRT matches to NC_022995 (Burkholderia sp. M701 plasmid pM7012 DNA, complete sequence) position: , mismatch: 6, identity: 0.8

ccggccgggacaccgccagcggcgccgtgg----	CRISPR spacer
ccagccgggagaccgccagcggc----tggctct	Protospacer
**.******* ************    ***

171. spacer 1.12|332530|30|NZ_CP012506|CRT matches to NC_003903 (Streptomyces coelicolor A3(2) plasmid SCP1, complete sequence) position: , mismatch: 6, identity: 0.8

--ccggccgggacaccgccagcggcgccgtgg	CRISPR spacer
agatggcc--gacaccaccagcggcgccgtgc	Protospacer
   .****  ******.**************

172. spacer 4.1|364855|27|NZ_CP012506|CRISPRCasFinder matches to NZ_CP045917 (Pseudomonas aeruginosa strain CF39S plasmid pCF39S, complete sequence) position: , mismatch: 6, identity: 0.778

aacgcaccggtgtccacatcgcccgtg	CRISPR spacer
agttcactggtgtccacatcgcccgaa	Protospacer
*.. ***.***************** .

173. spacer 4.6|365185|33|NZ_CP012506|CRISPRCasFinder matches to NZ_CP010410 (Xanthomonas sacchari strain R1 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.818

aggctgccgatcccgatctggccgttgccggtg	CRISPR spacer
agcaggtcgatcacgatctggccgttgccggcg	Protospacer
**   *.***** ******************.*

174. spacer 4.7|365251|27|NZ_CP012506|CRISPRCasFinder matches to NZ_CP022542 (Antarctobacter heliothermus strain SMS3 plasmid pSMS3-2, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaagccgatgttgtagctgccggtg	CRISPR spacer
ggataggcgatgttgtagctgccggaa	Protospacer
* . ** ****************** .

175. spacer 4.9|365401|27|NZ_CP012506|CRISPRCasFinder matches to NC_009959 (Dinoroseobacter shibae DFL 12 = DSM 16493 plasmid pDSHI05, complete sequence) position: , mismatch: 6, identity: 0.778

gccaagccgatatcgaagatcccggtg	CRISPR spacer
accatgccgatatcgacgatcccgtcc	Protospacer
.*** *********** ******* .

176. spacer 4.10|365461|27|NZ_CP012506|CRISPRCasFinder matches to NZ_CP009112 (Rhodococcus opacus strain 1CP plasmid pR1CP1, complete sequence) position: , mismatch: 6, identity: 0.778

accccgccgaagttgaggtcgccgagg	CRISPR spacer
tagacgccgaagtcgaggtcggcgagg	Protospacer
    *********.******* *****

177. spacer 4.10|365461|27|NZ_CP012506|CRISPRCasFinder matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 6, identity: 0.778

accccgccgaagttgaggtcgccgagg	CRISPR spacer
ctcccgccgaagttgagggtgccgaac	Protospacer
 .**************** .*****.

178. spacer 4.10|365461|27|NZ_CP012506|CRISPRCasFinder matches to NZ_AP014705 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence) position: , mismatch: 6, identity: 0.778

accccgccgaagttgaggtcgccgagg	CRISPR spacer
aagaagccgaagttgaggtcgccgtag	Protospacer
*    ******************* .*

179. spacer 4.10|365461|27|NZ_CP012506|CRISPRCasFinder matches to MK494099 (Mycobacterium phage Typha, complete genome) position: , mismatch: 6, identity: 0.778

accccgccgaagttgaggtcgccgagg	CRISPR spacer
cggtcgccgaggtcgaggtcgccgagg	Protospacer
   .******.**.*************

180. spacer 5.1|690414|31|NZ_CP012506|CRISPRCasFinder matches to GQ141189 (Bifidobacterium phage Bbif-1, complete sequence) position: , mismatch: 6, identity: 0.806

agcgcgaacggcaagccgaac----cgttggaccc	CRISPR spacer
agcgcgaacggccagccgaaccatgcgctgg----	Protospacer
************ ********    **.***

181. spacer 6.1|1570836|28|NZ_CP012506|CRISPRCasFinder matches to NZ_AP022571 (Mycolicibacterium poriferae strain JCM 12603 plasmid pJCM12603, complete sequence) position: , mismatch: 6, identity: 0.786

gttgccgggggtgccatcgttgccggcc	CRISPR spacer
ggtgccgggggtggcaccgttgccgcgg	Protospacer
* *********** **.********

182. spacer 6.1|1570836|28|NZ_CP012506|CRISPRCasFinder matches to NC_008703 (Mycobacterium sp. KMS plasmid pMKMS01, complete sequence) position: , mismatch: 6, identity: 0.786

gttgccgggggtgccatcgttgccggcc	CRISPR spacer
ggtgccgggggtggcaccgttgccgcgg	Protospacer
* *********** **.********

183. spacer 6.1|1570836|28|NZ_CP012506|CRISPRCasFinder matches to NZ_LR594663 (Variovorax sp. RA8 plasmid 2) position: , mismatch: 6, identity: 0.786

gttgccgggggtgccatcgttgccggcc	CRISPR spacer
ggtgccggcggtgccatcggtgccgagg	Protospacer
* ****** ********** *****.

184. spacer 6.10|1571451|31|NZ_CP012506|CRISPRCasFinder matches to NZ_LR594669 (Variovorax sp. SRS16 plasmid 4) position: , mismatch: 6, identity: 0.806

aattgcgccttgcccgccgttgccgccggca	CRISPR spacer
ccttgcgccttgcccgccgctgccgcagggc	Protospacer
  *****************.****** **

185. spacer 6.10|1571451|31|NZ_CP012506|CRISPRCasFinder matches to NZ_LR594673 (Variovorax sp. PBL-E5 plasmid 3) position: , mismatch: 6, identity: 0.806

aattgcgccttgcccgccgttgccgccggca	CRISPR spacer
ccttgcgccttgcccgccgctgccgcagggc	Protospacer
  *****************.****** **

186. spacer 6.13|1571700|34|NZ_CP012506|CRISPRCasFinder matches to NZ_CP044425 (Paracoccus pantotrophus strain DSM 2944 plasmid pPAN2, complete sequence) position: , mismatch: 6, identity: 0.824

--gtcgccgtgcagccagccaccaccgccaccggcg	CRISPR spacer
ctgtcgtc--gcagcgcgccaccaccgccaccggca	Protospacer
  ****.*  *****  ******************.

187. spacer 1.3|332050|30|NZ_CP012506|CRT matches to MK460246 (Mycobacterium phage Nibb, complete genome) position: , mismatch: 7, identity: 0.767

ccggcggagccgaagagcaagccgccgttc	CRISPR spacer
ccggcgaagccgaagcgcaagccgaaacgc	Protospacer
******.******** ********  .. *

188. spacer 1.12|332530|30|NZ_CP012506|CRT matches to NZ_CP021767 (Ralstonia solanacearum strain RS 489 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767

ccggccgggacaccgccagcggcgccgtgg	CRISPR spacer
ccggccaggacaccggcagcggcgcgaaca	Protospacer
******.******** ********* .  .

189. spacer 1.12|332530|30|NZ_CP012506|CRT matches to NZ_AP022611 (Mycolicibacterium madagascariense strain JCM 13574 plasmid pJCM13574) position: , mismatch: 7, identity: 0.767

ccggccgggacaccgccagcggcgccgtgg	CRISPR spacer
ttggcccggtcaccgccagcggcgccgcca	Protospacer
..**** ** *****************. .

190. spacer 1.12|332530|30|NZ_CP012506|CRT matches to NZ_AP022334 (Methylosinus sp. C49 isolate Methylosinus sp. C49 plasmid pMSC49b, complete sequence) position: , mismatch: 7, identity: 0.767

ccggccgggacaccgccagcggcgccgtgg	CRISPR spacer
cgggccggaacaccgccagcggcgtgaggc	Protospacer
* ******.***************. . *

191. spacer 1.12|332530|30|NZ_CP012506|CRT matches to NZ_CP024582 (Roseomonas sp. FDAARGOS_362 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

ccggccgggacaccgccagcggcgccgtgg	CRISPR spacer
tcgcctatgactccgccagcggcgccgtgc	Protospacer
.** *.. *** *****************

192. spacer 1.12|332530|30|NZ_CP012506|CRT matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 7, identity: 0.767

ccggccgggacaccgccagcggcgccgtgg	CRISPR spacer
ccggccaggacaccgccagcagcacaccga	Protospacer
******.*************.**.*  .*.

193. spacer 1.12|332530|30|NZ_CP012506|CRT matches to NZ_CP007794 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence) position: , mismatch: 7, identity: 0.767

ccggccgggacaccgccagcggcgccgtgg	CRISPR spacer
ccggccaggacaccgccagcagcacgccga	Protospacer
******.*************.**.*  .*.

194. spacer 1.12|332530|30|NZ_CP012506|CRT matches to NZ_AP022622 (Mycobacteroides abscessus strain JCM 30620 plasmid pJCM30620_1) position: , mismatch: 7, identity: 0.767

ccggccgggacaccgccagcggcgccgtgg	CRISPR spacer
ccatccggcacaccgccagcggcaccggca	Protospacer
**. **** **************.***  .

195. spacer 1.12|332530|30|NZ_CP012506|CRT matches to NZ_AP022622 (Mycobacteroides abscessus strain JCM 30620 plasmid pJCM30620_1) position: , mismatch: 7, identity: 0.767

ccggccgggacaccgccagcggcgccgtgg	CRISPR spacer
ccatccggcacaccgccagcggcaccggca	Protospacer
**. **** **************.***  .

196. spacer 1.12|332530|30|NZ_CP012506|CRT matches to NC_017966 (Tistrella mobilis KA081020-065 plasmid pTM2, complete sequence) position: , mismatch: 7, identity: 0.767

ccggccgggacaccgccagcggcgccgtgg	CRISPR spacer
acggccgggtcatcgccagcggcgaaccgg	Protospacer
 ******** **.***********   .**

197. spacer 1.12|332530|30|NZ_CP012506|CRT matches to NZ_CP006368 (Aureimonas sp. AU20 plasmid pAU20a, complete sequence) position: , mismatch: 7, identity: 0.767

ccggccgggacaccgccagcggcgccgtgg	CRISPR spacer
accgcatcgaccccgccagcggcgccgtga	Protospacer
 * **   *** *****************.

198. spacer 1.12|332530|30|NZ_CP012506|CRT matches to NZ_CP032340 (Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.767

ccggccgggacaccgccagcggcgccgtgg	CRISPR spacer
ccggccaggacaccgccagcagcacgccga	Protospacer
******.*************.**.*  .*.

199. spacer 1.12|332530|30|NZ_CP012506|CRT matches to NZ_CP012915 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence) position: , mismatch: 7, identity: 0.767

ccggccgggacaccgccagcggcgccgtgg	CRISPR spacer
ccggccaggacaccgccagcagcacgccga	Protospacer
******.*************.**.*  .*.

200. spacer 1.12|332530|30|NZ_CP012506|CRT matches to NC_021279 (Mycobacteroides abscessus subsp. bolletii 50594 plasmid 2, complete sequence) position: , mismatch: 7, identity: 0.767

ccggccgggacaccgccagcggcgccgtgg	CRISPR spacer
ccatccggcacaccgccagcggcaccggca	Protospacer
**. **** **************.***  .

201. spacer 4.4|365050|27|NZ_CP012506|CRISPRCasFinder matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 7, identity: 0.741

aagccgcccgagttcgcgagaccgaag	CRISPR spacer
tgaccgcccgagttcgcgagacgttgg	Protospacer
 ..*******************   .*

202. spacer 5.1|690414|31|NZ_CP012506|CRISPRCasFinder matches to MK977708 (Mycobacterium phage Fulbright, complete genome) position: , mismatch: 7, identity: 0.774

agcgcgaacggcaagccgaaccgttggaccc	CRISPR spacer
cgcgcgaacggcatcccgaaccgttgaccgg	Protospacer
 ************  ***********. *

203. spacer 5.1|690414|31|NZ_CP012506|CRISPRCasFinder matches to MG099948 (Mycobacterium phage Philonius, complete genome) position: , mismatch: 7, identity: 0.774

agcgcgaacggcaagccgaaccgttggaccc	CRISPR spacer
cgcgcgaacggcatcccgaaccgttgaccgg	Protospacer
 ************  ***********. *

204. spacer 5.1|690414|31|NZ_CP012506|CRISPRCasFinder matches to MH926055 (Mycobacterium phage Chewbacca, complete genome) position: , mismatch: 7, identity: 0.774

agcgcgaacggcaagccgaaccgttggaccc	CRISPR spacer
cgcgcgaacggcatcccgaaccgttgaccgg	Protospacer
 ************  ***********. *

205. spacer 5.1|690414|31|NZ_CP012506|CRISPRCasFinder matches to MT723932 (Mycobacterium phage Schnauzer, complete genome) position: , mismatch: 7, identity: 0.774

agcgcgaacggcaagccgaaccgttggaccc	CRISPR spacer
cgcgcgaacggcatcccgaaccgttgaccgg	Protospacer
 ************  ***********. *

206. spacer 5.1|690414|31|NZ_CP012506|CRISPRCasFinder matches to KU935726 (Mycobacterium phage Xerxes, complete genome) position: , mismatch: 7, identity: 0.774

agcgcgaacggcaagccgaaccgttggaccc	CRISPR spacer
cgcgcgaacggcatcccgaaccgttgaccgg	Protospacer
 ************  ***********. *

207. spacer 5.1|690414|31|NZ_CP012506|CRISPRCasFinder matches to KU935730 (Mycobacterium phage Pipsqueaks, complete genome) position: , mismatch: 7, identity: 0.774

agcgcgaacggcaagccgaaccgttggaccc	CRISPR spacer
cgcgcgaacggcatcccgaaccgttgaccgg	Protospacer
 ************  ***********. *

208. spacer 5.1|690414|31|NZ_CP012506|CRISPRCasFinder matches to MH316570 (Mycobacterium phage Silvafighter, complete genome) position: , mismatch: 7, identity: 0.774

agcgcgaacggcaagccgaaccgttggaccc	CRISPR spacer
cgcgcgaacggcatcccgaaccgttgaccgg	Protospacer
 ************  ***********. *

209. spacer 5.1|690414|31|NZ_CP012506|CRISPRCasFinder matches to MK524518 (Mycobacterium phage Smurph, complete genome) position: , mismatch: 7, identity: 0.774

agcgcgaacggcaagccgaaccgttggaccc	CRISPR spacer
cgcgcgaacggcatcccgaaccgttgaccgg	Protospacer
 ************  ***********. *

210. spacer 5.1|690414|31|NZ_CP012506|CRISPRCasFinder matches to MK524515 (Mycobacterium phage Parmesanjohn, complete genome) position: , mismatch: 7, identity: 0.774

agcgcgaacggcaagccgaaccgttggaccc	CRISPR spacer
cgcgcgaacggcatcccgaaccgttgaccgg	Protospacer
 ************  ***********. *

211. spacer 5.1|690414|31|NZ_CP012506|CRISPRCasFinder matches to MH697585 (Mycobacterium phage Gex, complete genome) position: , mismatch: 7, identity: 0.774

agcgcgaacggcaagccgaaccgttggaccc	CRISPR spacer
cgcgcgaacggcatcccgaaccgttgaccgg	Protospacer
 ************  ***********. *

212. spacer 5.1|690414|31|NZ_CP012506|CRISPRCasFinder matches to KM588359 (Mycobacterium phage Carcharodon, complete genome) position: , mismatch: 7, identity: 0.774

agcgcgaacggcaagccgaaccgttggaccc	CRISPR spacer
cgcgcgaacggcatcccgaaccgttgaccgg	Protospacer
 ************  ***********. *

213. spacer 5.1|690414|31|NZ_CP012506|CRISPRCasFinder matches to MH697576 (Mycobacterium phage Aggie, complete genome) position: , mismatch: 7, identity: 0.774

agcgcgaacggcaagccgaaccgttggaccc	CRISPR spacer
cgcgcgaacggcatcccgaaccgttgaccgg	Protospacer
 ************  ***********. *

214. spacer 5.1|690414|31|NZ_CP012506|CRISPRCasFinder matches to MH697593 (Mycobacterium phage Tapioca, complete genome) position: , mismatch: 7, identity: 0.774

agcgcgaacggcaagccgaaccgttggaccc	CRISPR spacer
cgcgcgaacggcatcccgaaccgttgaccgg	Protospacer
 ************  ***********. *

215. spacer 5.1|690414|31|NZ_CP012506|CRISPRCasFinder matches to MG099936 (Mycobacterium phage Andies, complete genome) position: , mismatch: 7, identity: 0.774

agcgcgaacggcaagccgaaccgttggaccc	CRISPR spacer
cgcgcgaacggcatcccgaaccgttgaccgg	Protospacer
 ************  ***********. *

216. spacer 5.1|690414|31|NZ_CP012506|CRISPRCasFinder matches to NC_031243 (Mycobacterium phage Xeno, complete genome) position: , mismatch: 7, identity: 0.774

agcgcgaacggcaagccgaaccgttggaccc	CRISPR spacer
cgcgcgaacggcatcccgaaccgttgaccgg	Protospacer
 ************  ***********. *

217. spacer 5.1|690414|31|NZ_CP012506|CRISPRCasFinder matches to JN256079 (Mycobacterium phage Charlie, complete genome) position: , mismatch: 7, identity: 0.774

agcgcgaacggcaagccgaaccgttggaccc	CRISPR spacer
cgcgcgaacggcatcccgaaccgttgaccgg	Protospacer
 ************  ***********. *

218. spacer 6.1|1570836|28|NZ_CP012506|CRISPRCasFinder matches to NC_010553 (Burkholderia ambifaria MC40-6 plasmid pBMC401, complete sequence) position: , mismatch: 7, identity: 0.75

gttgccgggggtgccatcgttgccggcc	CRISPR spacer
agcacccggggtgccgtcgttgccggcg	Protospacer
. ..** ********.***********

219. spacer 6.10|1571451|31|NZ_CP012506|CRISPRCasFinder matches to NZ_CP041045 (Paracoccus sp. AK26 plasmid pAK1, complete sequence) position: , mismatch: 7, identity: 0.774

aattgcgccttgcccgccgttgccgccggca	CRISPR spacer
gttgccgccatgcccgccgctgccgccggcc	Protospacer
. *  **** *********.**********

220. spacer 6.10|1571451|31|NZ_CP012506|CRISPRCasFinder matches to CP017041 (Propionibacterium sp. oral taxon 193 strain F0672 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.774

aattgcgccttgcccgccgttgccgccggca	CRISPR spacer
aacggcgtcttgcccgccgtggccgccaccg	Protospacer
**. ***.************ ******. *.

221. spacer 7.3|2071112|30|NZ_CP012506|CRT matches to NZ_CP015065 (Mesorhizobium ciceri biovar biserrulae strain WSM1284 plasmid pMc1284, complete sequence) position: , mismatch: 7, identity: 0.767

tcggagaaagccgtcggtttgcacgctgtt	CRISPR spacer
ttcggtaaagccgtcggtgtgcacgctgac	Protospacer
*. *. ************ ********* .

222. spacer 7.3|2071112|30|NZ_CP012506|CRT matches to NZ_CP015063 (Mesorhizobium ciceri strain CC1192 plasmid pMc1192, complete sequence) position: , mismatch: 7, identity: 0.767

tcggagaaagccgtcggtttgcacgctgtt	CRISPR spacer
ttcggtaaagccgtcggtgtgcacgctgac	Protospacer
*. *. ************ ********* .

223. spacer 7.3|2071112|30|NZ_CP012506|CRT matches to NC_014918 (Mesorhizobium ciceri biovar biserrulae WSM1271 plasmid pMESCI01, complete sequence) position: , mismatch: 7, identity: 0.767

tcggagaaagccgtcggtttgcacgctgtt	CRISPR spacer
ttcggtaaagccgtcggtgtgcacgctgac	Protospacer
*. *. ************ ********* .

224. spacer 12.6|3740365|32|NZ_CP012506|CRT matches to NZ_CP021805 (Sinorhizobium meliloti strain T073 plasmid psymA, complete sequence) position: , mismatch: 7, identity: 0.781

ttttctcccgcgacggtgggggtggcgccggc	CRISPR spacer
ttgagatccgcgacgatgggtgtggcgccggc	Protospacer
**    .********.**** ***********

225. spacer 12.6|3740365|32|NZ_CP012506|CRT matches to NZ_CP054621 (Azospirillum oryzae strain KACC 14407 plasmid unnamed6, complete sequence) position: , mismatch: 7, identity: 0.781

ttttctcccgcgacggtgggggtggcgccggc	CRISPR spacer
ttcccgcaggcgacggtgcgggcggcgccggc	Protospacer
**..* *  ********* ***.*********

226. spacer 1.3|332050|30|NZ_CP012506|CRT matches to NC_008826 (Methylibium petroleiphilum PM1 plasmid RPME01, complete sequence) position: , mismatch: 8, identity: 0.733

ccggcggagccgaagagcaagccgccgttc	CRISPR spacer
agcacgaagccgaagagaaagccgccgatg	Protospacer
   .**.********** ********* *

227. spacer 1.12|332530|30|NZ_CP012506|CRT matches to NC_019847 (Sinorhizobium meliloti GR4 plasmid pRmeGR4b, complete sequence) position: , mismatch: 8, identity: 0.733

ccggccgggacaccgccagcggcgccgtgg	CRISPR spacer
tcaccctggacaccgcctgcggcgccggac	Protospacer
.*. ** ********** ********* .

228. spacer 1.12|332530|30|NZ_CP012506|CRT matches to NZ_CP039340 (Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence) position: , mismatch: 8, identity: 0.733

ccggccgggacaccgccagcggcgccgtgg	CRISPR spacer
ccggccaggacaccggcagcggcacgaaca	Protospacer
******.******** *******.* .  .

229. spacer 1.12|332530|30|NZ_CP012506|CRT matches to NC_010510 (Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, complete sequence) position: , mismatch: 8, identity: 0.733

ccggccgggacaccgccagcggcgccgtgg	CRISPR spacer
tcgcggtcgacaccgccagcggcgacgtga	Protospacer
.**     **************** ****.

230. spacer 1.12|332530|30|NZ_CP012506|CRT matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.733

ccggccgggacaccgccagcg----gcgccgtgg	CRISPR spacer
agggccgggacaccgcccgcggccagcgct----	Protospacer
  *************** ***    ****.

231. spacer 4.6|365185|33|NZ_CP012506|CRISPRCasFinder matches to NZ_CP017105 (Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence) position: , mismatch: 8, identity: 0.758

aggctgccgatcccgatctggccgttgccggtg	CRISPR spacer
ttggtgtcgatctcgatctggccgttgcccgca	Protospacer
  * **.*****.**************** *..

232. spacer 4.6|365185|33|NZ_CP012506|CRISPRCasFinder matches to NC_016624 (Azospirillum lipoferum 4B plasmid AZO_p5, complete sequence) position: , mismatch: 8, identity: 0.758

aggctgccgatcccgatctggccgttgccggtg	CRISPR spacer
agctggttgatgccgatctggccgctgccggtc	Protospacer
** . *..*** ************.*******

233. spacer 4.6|365185|33|NZ_CP012506|CRISPRCasFinder matches to NZ_CP039965 (Pseudorhodobacter sp. S12M18 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.758

aggctgccgatcccgatctggccgttgccggtg	CRISPR spacer
atgctgccgaccccgatctggtcgttttcgact	Protospacer
* ********.**********.**** .**..

234. spacer 4.6|365185|33|NZ_CP012506|CRISPRCasFinder matches to CP007644 (Rhizobium etli bv. phaseoli str. IE4803 plasmid pRetIE4803c, complete sequence) position: , mismatch: 8, identity: 0.758

aggctgccgatcccgatctggccgttgccggtg	CRISPR spacer
cggctgccgatcccgatcaggacgtcgaccttc	Protospacer
 ***************** ** ***.* *  *

235. spacer 4.6|365185|33|NZ_CP012506|CRISPRCasFinder matches to NZ_CP029834 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed4, complete sequence) position: , mismatch: 8, identity: 0.758

aggctgccgatcccgatctggccgttgccggtg	CRISPR spacer
agctggttgatgccgatctggccgctgccggtc	Protospacer
** . *..*** ************.*******

236. spacer 6.10|1571451|31|NZ_CP012506|CRISPRCasFinder matches to NZ_CP017076 (Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence) position: , mismatch: 8, identity: 0.742

aattgcgccttgcccgccgttgccgccggca	CRISPR spacer
gcgggcgccttgtccgccgctgccgccgggc	Protospacer
.   ********.******.*********

237. spacer 6.10|1571451|31|NZ_CP012506|CRISPRCasFinder matches to NZ_CP039899 (Agrobacterium tumefaciens strain CFBP5877 plasmid pAtCFBP5877a, complete sequence) position: , mismatch: 8, identity: 0.742

aattgcgccttgcccgccgttgccgccggca	CRISPR spacer
ggcagcgcaatgcccgccgttgccgccgcaa	Protospacer
... ****  ******************  *

238. spacer 6.10|1571451|31|NZ_CP012506|CRISPRCasFinder matches to NZ_CP039913 (Agrobacterium tumefaciens strain CFBP6625 plasmid pAtCFBP6625b, complete sequence) position: , mismatch: 8, identity: 0.742

aattgcgccttgcccgccgttgccgccggca	CRISPR spacer
ggcagcgcaatgcccgccgttgccgccgcaa	Protospacer
... ****  ******************  *

239. spacer 6.10|1571451|31|NZ_CP012506|CRISPRCasFinder matches to NZ_CP039890 (Agrobacterium tumefaciens strain CFBP5499 plasmid pAtCFBP5499a, complete sequence) position: , mismatch: 8, identity: 0.742

aattgcgccttgcccgccgttgccgccggca	CRISPR spacer
ggcagcgcaatgcccgccgttgccgccgcaa	Protospacer
... ****  ******************  *

240. spacer 6.10|1571451|31|NZ_CP012506|CRISPRCasFinder matches to NZ_CP018001 (Rhizobium sp. Y9 plasmid pY9, complete sequence) position: , mismatch: 8, identity: 0.742

aattgcgccttgcccgccgttgccgccggca	CRISPR spacer
ggcagcgcaatgcccgccgttgccgccgcaa	Protospacer
... ****  ******************  *

241. spacer 6.10|1571451|31|NZ_CP012506|CRISPRCasFinder matches to NC_022536 (Rhizobium sp. IRBG74 plasmid IRBL74_p, complete sequence) position: , mismatch: 8, identity: 0.742

aattgcgccttgcccgccgttgccgccggca	CRISPR spacer
ggcagcgcaatgcccgccgttgccgccgcaa	Protospacer
... ****  ******************  *

242. spacer 6.10|1571451|31|NZ_CP012506|CRISPRCasFinder matches to NZ_CP053858 (Rhizobium pusense strain 76 plasmid pR76, complete sequence) position: , mismatch: 8, identity: 0.742

aattgcgccttgcccgccgttgccgccggca	CRISPR spacer
ggcagcgcaatgcccgccgttgccgccgcaa	Protospacer
... ****  ******************  *

243. spacer 6.10|1571451|31|NZ_CP012506|CRISPRCasFinder matches to NZ_CP018075 (Streptomyces venezuelae strain NRRL B-65442 plasmid, complete sequence) position: , mismatch: 8, identity: 0.742

aattgcgccttgcccgccgttgccgccggca	CRISPR spacer
gcgagcgccttgcccgccgtggtcgccgccc	Protospacer
.   **************** *.***** *

244. spacer 6.10|1571451|31|NZ_CP012506|CRISPRCasFinder matches to CP036360 (Agrobacterium sp. 33MFTa1.1 plasmid p_JBx_073812, complete sequence) position: , mismatch: 8, identity: 0.742

aattgcgccttgcccgccgttgccgccggca	CRISPR spacer
ggcagcgcaatgcccgccgttgccgccgcaa	Protospacer
... ****  ******************  *

245. spacer 6.10|1571451|31|NZ_CP012506|CRISPRCasFinder matches to NZ_CP021914 (Sagittula sp. P11 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.742

aattgc--gccttgcccgccgttgccgccggca	CRISPR spacer
--ccgctggccttgcccggggttgccgccgggg	Protospacer
  ..**  **********  *********** .

246. spacer 6.10|1571451|31|NZ_CP012506|CRISPRCasFinder matches to NZ_AP022319 (Burkholderia sp. THE68 plasmid BTHE68_p1, complete sequence) position: , mismatch: 8, identity: 0.742

aattgcgccttgcccgccgttgccgccggca	CRISPR spacer
attgccgccctggccgccgttgccgccgatc	Protospacer
* *  ****.** ***************..

247. spacer 7.3|2071112|30|NZ_CP012506|CRT matches to NZ_CP017563 (Paraburkholderia sprentiae WSM5005 plasmid pl1WSM5005, complete sequence) position: , mismatch: 8, identity: 0.733

tcggagaaagccgtcggtttgcacgctgtt	CRISPR spacer
ccgcgagcagccgtcggtttgcgcgctgtc	Protospacer
.** ... **************.******.

248. spacer 7.3|2071112|30|NZ_CP012506|CRT matches to NZ_CP017563 (Paraburkholderia sprentiae WSM5005 plasmid pl1WSM5005, complete sequence) position: , mismatch: 8, identity: 0.733

tcggagaaagccgtcggtttgcacgctgtt	CRISPR spacer
ccgcgagcagccgtcggtttgcgcgctgtc	Protospacer
.** ... **************.******.

249. spacer 12.6|3740365|32|NZ_CP012506|CRT matches to NZ_CP039340 (Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence) position: , mismatch: 8, identity: 0.75

ttttctcccgcgacggtgggggtggcgccggc	CRISPR spacer
agcgcggccgcgtcggtgggggtggcgcccgc	Protospacer
  . *  ***** **************** **

250. spacer 12.6|3740365|32|NZ_CP012506|CRT matches to MG812496 (Gordonia phage SallySpecial, complete genome) position: , mismatch: 8, identity: 0.75

ttttctcccgcgacggtgggggtggcgccggc	CRISPR spacer
cgcaccaccgcggcggtgcgggtggcgccggc	Protospacer
. . *. *****.***** *************

251. spacer 1.13|332578|39|NZ_CP012506|CRT matches to NZ_CP029832 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.769

--ccgaagagcaaaccggcgtcgccgccgcgcccgccggcc	CRISPR spacer
ggccggcgg--aaaccggcgtcgccgcggcggccgccggag	Protospacer
  ***. *.  **************** *** *******

252. spacer 4.6|365185|33|NZ_CP012506|CRISPRCasFinder matches to NZ_CP023071 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence) position: , mismatch: 9, identity: 0.727

aggctgccgatcccgatctggccgttgccggtg	CRISPR spacer
ttgtattcgatcccgatctggccgtcgccggcc	Protospacer
  *.  .******************.*****.

253. spacer 4.6|365185|33|NZ_CP012506|CRISPRCasFinder matches to NZ_CP016287 (Rhizobium leguminosarum strain Vaf10 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.727

aggctgccgatcccgatctggccgttgccggtg	CRISPR spacer
cggctgccgatcccgatcaggacgtctaccttc	Protospacer
 ***************** ** ***.  *  *

254. spacer 4.6|365185|33|NZ_CP012506|CRISPRCasFinder matches to NZ_CP022565 (Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK01, complete sequence) position: , mismatch: 9, identity: 0.727

aggctgccgatcccgatctggccgttgccggtg	CRISPR spacer
cggctgccgatcccgatcaggacgtctaccttc	Protospacer
 ***************** ** ***.  *  *

255. spacer 4.6|365185|33|NZ_CP012506|CRISPRCasFinder matches to NZ_CP048281 (Rhizobium leguminosarum bv. viciae 248 plasmid pRle248e, complete sequence) position: , mismatch: 9, identity: 0.727

aggctgccgatcccgatctggccgttgccggtg	CRISPR spacer
cggctgccgatcccgatcaggacgtctaccttc	Protospacer
 ***************** ** ***.  *  *

256. spacer 5.1|690414|31|NZ_CP012506|CRISPRCasFinder matches to NZ_CP014964 (Geobacter anodireducens strain SD-1 plasmid pSD, complete sequence) position: , mismatch: 9, identity: 0.71

agcgcgaacggcaagccgaaccgttggaccc	CRISPR spacer
ggaacgaacggcaagccgaaatgttggtgga	Protospacer
.* .**************** .*****

257. spacer 5.1|690414|31|NZ_CP012506|CRISPRCasFinder matches to NC_015974 (Sphingobium sp. SYK-6 plasmid pSLPG, complete sequence) position: , mismatch: 9, identity: 0.71

agcgcgaacggcaagccgaaccgttggaccc	CRISPR spacer
taagcgaacggtaagccgaaccgctgaggcg	Protospacer
 . ********.***********.**.. *

258. spacer 5.1|690414|31|NZ_CP012506|CRISPRCasFinder matches to NZ_CP005085 (Sphingobium sp. TKS plasmid pTK1, complete sequence) position: , mismatch: 9, identity: 0.71

agcgcgaacggcaagccgaaccgttggaccc	CRISPR spacer
taagcgaacggtaagccgaaccgctgaggcg	Protospacer
 . ********.***********.**.. *

259. spacer 6.10|1571451|31|NZ_CP012506|CRISPRCasFinder matches to NZ_CP039697 (Novosphingobium sp. ABRDHK2 plasmid pABRDHK22, complete sequence) position: , mismatch: 9, identity: 0.71

aattgcgccttgcccgccgttgccgccggca	CRISPR spacer
ggcctcgccctgcccgccgttgccgcccacg	Protospacer
.... ****.***************** .*.

260. spacer 6.10|1571451|31|NZ_CP012506|CRISPRCasFinder matches to NZ_CP049244 (Rhizobium pseudoryzae strain DSM 19479 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.71

aattgcgccttgcccgccgttgccgccggca	CRISPR spacer
tggcccgccttgccctccattgccgccggac	Protospacer
 . . ********** **.**********

261. spacer 6.10|1571451|31|NZ_CP012506|CRISPRCasFinder matches to NC_022049 (Paracoccus aminophilus JCM 7686 plasmid pAMI4, complete sequence) position: , mismatch: 9, identity: 0.71

aattgcgccttgcccgccgttgccgccggca	CRISPR spacer
atccttgccttgaccgccgttgccgccgctg	Protospacer
* .. .****** *************** ..

262. spacer 6.10|1571451|31|NZ_CP012506|CRISPRCasFinder matches to MN234199 (Mycobacterium phage Ekdilam, complete genome) position: , mismatch: 9, identity: 0.71

aattgcgccttgcccgccgttgccgccggca	CRISPR spacer
accccagccctgcccgccgttgccgccgctc	Protospacer
* ..  ***.****************** .

263. spacer 6.10|1571451|31|NZ_CP012506|CRISPRCasFinder matches to NZ_CP023000 (Rhizobium sp. 11515TR strain 10195 plasmid p11515TR-B, complete sequence) position: , mismatch: 9, identity: 0.71

aattgcgccttgcccgccgttgccgccggca	CRISPR spacer
gcttgcgcctggcccgccgtagccggacacc	Protospacer
. ******** ********* ****   .*

264. spacer 6.10|1571451|31|NZ_CP012506|CRISPRCasFinder matches to NZ_CP015737 (Shinella sp. HZN7 plasmid pShin-01, complete sequence) position: , mismatch: 9, identity: 0.71

aattgcgccttgcccgccgttgccgccggca	CRISPR spacer
accggcaccttgcccgccattgccgccatgt	Protospacer
* . **.***********.********.

265. spacer 6.10|1571451|31|NZ_CP012506|CRISPRCasFinder matches to NZ_CP013740 (Streptomyces globisporus C-1027 plasmid pSGL1, complete sequence) position: , mismatch: 9, identity: 0.71

aattgcgccttgcccgccgttgccgccggca	CRISPR spacer
cgggccgccttgtccgccgtggccgccgacc	Protospacer
 .   *******.******* *******.*

266. spacer 6.10|1571451|31|NZ_CP012506|CRISPRCasFinder matches to NC_016626 (Burkholderia sp. YI23 plasmid byi_1p, complete sequence) position: , mismatch: 9, identity: 0.71

aattgcgccttgcccgccgttgccgccggca	CRISPR spacer
agcgtggccttggccgccgttgccggcggtc	Protospacer
*..   ****** ************ ***.

267. spacer 12.6|3740365|32|NZ_CP012506|CRT matches to NC_024970 (Streptomyces aureofaciens strain CCM3239 plasmid pSA3239, complete sequence) position: , mismatch: 9, identity: 0.719

ttttctcccgcgacggtgggggtggcgccggc	CRISPR spacer
agaccgcccgcgatggagggggtggcgccgag	Protospacer
   .* *******.** *************.

268. spacer 12.6|3740365|32|NZ_CP012506|CRT matches to NZ_KJ396772 (Streptomyces lavendulae subsp. lavendulae strain CCM3239 plasmid pSA3239, complete sequence) position: , mismatch: 9, identity: 0.719

ttttctcccgcgacggtgggggtggcgccggc	CRISPR spacer
agaccgcccgcgatggagggggtggcgccgag	Protospacer
   .* *******.** *************.

269. spacer 12.6|3740365|32|NZ_CP012506|CRT matches to NZ_CP029831 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed7, complete sequence) position: , mismatch: 9, identity: 0.719

ttttctcccgcgacggtgggggtggcgccggc	CRISPR spacer
gcccccggcgtgacggtggaggtggcgccggc	Protospacer
 ...*.  **.********.************

270. spacer 12.6|3740365|32|NZ_CP012506|CRT matches to NZ_CP024986 (Streptomyces lavendulae subsp. lavendulae strain CCM 3239 plasmid pSA3239, complete sequence) position: , mismatch: 9, identity: 0.719

ttttctcccgcgacggtgggggtggcgccggc	CRISPR spacer
agaccgcccgcgatggagggggtggcgccgag	Protospacer
   .* *******.** *************.

271. spacer 12.6|3740365|32|NZ_CP012506|CRT matches to NZ_LN868942 (Nocardia farcinica strain NCTC11134 plasmid 5, complete sequence) position: , mismatch: 9, identity: 0.719

ttttctcccgcgacggtgggggtggcgccggc	CRISPR spacer
cccaccgcggcgacgggggcggtggcgccggc	Protospacer
... *. * ******* ** ************

272. spacer 12.6|3740365|32|NZ_CP012506|CRT matches to NZ_CP031420 (Nocardia farcinica strain W6977 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

ttttctcccgcgacggtgggggtggcgccggc	CRISPR spacer
cccaccgcggcgacgggggcggtggcgccggc	Protospacer
... *. * ******* ** ************

273. spacer 12.6|3740365|32|NZ_CP012506|CRT matches to NZ_CP007130 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence) position: , mismatch: 9, identity: 0.719

ttttctcccgcgacggtgggggtggcgccggc	CRISPR spacer
gtggcggtggcggcggtgggggtggcggcggc	Protospacer
 *  *  . ***.************** ****

274. spacer 12.6|3740365|32|NZ_CP012506|CRT matches to NZ_CP024681 (Citrobacter freundii strain UMH14 plasmid pUMH14_1, complete sequence) position: , mismatch: 9, identity: 0.719

ttttctcccgcgacggtgggggtggcgccggc	CRISPR spacer
tgcgaccgggcgacggtggaggtggcgccagc	Protospacer
* .  .*  **********.*********.**

275. spacer 12.6|3740365|32|NZ_CP012506|CRT matches to NZ_CP005086 (Sphingobium sp. TKS plasmid pTK2, complete sequence) position: , mismatch: 9, identity: 0.719

ttttctcccgcgacggtgggggtggcgccggc	CRISPR spacer
caacattcagcgacggtgggtgtggcggcggc	Protospacer
.  . *.* *********** ****** ****

276. spacer 12.6|3740365|32|NZ_CP012506|CRT matches to MH271296 (Gordonia phage Emperor, complete genome) position: , mismatch: 9, identity: 0.719

ttttctcccgcgacggtgggggtggcgccggc	CRISPR spacer
cgcacgacggcggcggtgcgggtggcgccggc	Protospacer
. . *  * ***.***** *************

277. spacer 4.6|365185|33|NZ_CP012506|CRISPRCasFinder matches to NZ_CP013110 (Sinorhizobium americanum strain CFNEI 73 plasmid C, complete sequence) position: , mismatch: 10, identity: 0.697

aggctgccgatcccgatctggccgttgccggtg	CRISPR spacer
ttgtactcgatgccgatctggccgtcgccggcc	Protospacer
  *.  .**** *************.*****.

278. spacer 4.6|365185|33|NZ_CP012506|CRISPRCasFinder matches to NZ_CP013054 (Sinorhizobium americanum CCGM7 plasmid C, complete sequence) position: , mismatch: 10, identity: 0.697

aggctgccgatcccgatctggccgttgccggtg	CRISPR spacer
ttgtactcgatgccgatctggccgtcgccggcc	Protospacer
  *.  .**** *************.*****.

279. spacer 4.6|365185|33|NZ_CP012506|CRISPRCasFinder matches to NZ_CP029232 (Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence) position: , mismatch: 10, identity: 0.697

aggctgccgatcccgatctggccgttgccggtg	CRISPR spacer
ttgtattcgatgccgatctggccgtcgccggcc	Protospacer
  *.  .**** *************.*****.

280. spacer 6.10|1571451|31|NZ_CP012506|CRISPRCasFinder matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 10, identity: 0.677

aattgcgccttgcccgccgttgccgccggca	CRISPR spacer
gggctcgcctcgcccgccgttcccgccgctc	Protospacer
.. . *****.********** ****** .

281. spacer 6.10|1571451|31|NZ_CP012506|CRISPRCasFinder matches to NZ_CP030864 (Streptomyces globosus strain LZH-48 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.677

aattgcgccttgcccgccgttgccgccggca	CRISPR spacer
ttcctcgccttccccgccgctgccgccgcgg	Protospacer
  .. ****** *******.********  .

282. spacer 6.10|1571451|31|NZ_CP012506|CRISPRCasFinder matches to NC_008269 (Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence) position: , mismatch: 10, identity: 0.677

aattgcgccttgcccgccgttgccgccggca	CRISPR spacer
ggccagaacttccccgctgttgccgccggca	Protospacer
..... . *** *****.*************

283. spacer 6.10|1571451|31|NZ_CP012506|CRISPRCasFinder matches to NC_017590 (Thermus thermophilus JL-18 plasmid pTTJL1802, complete sequence) position: , mismatch: 10, identity: 0.677

aattgcgccttgcccgccgttgccgccggca	CRISPR spacer
gggctcgcctcgcccgccgttcccgccgctc	Protospacer
.. . *****.********** ****** .

284. spacer 6.10|1571451|31|NZ_CP012506|CRISPRCasFinder matches to NZ_AP014581 (Burkholderia sp. RPE67 plasmid p3, complete sequence) position: , mismatch: 10, identity: 0.677

aattgcgccttgcccgccgttgccgccggca	CRISPR spacer
ggcgtggccttggccgccgttgccggcggtc	Protospacer
...   ****** ************ ***.

285. spacer 6.13|1571700|34|NZ_CP012506|CRISPRCasFinder matches to NZ_CP054621 (Azospirillum oryzae strain KACC 14407 plasmid unnamed6, complete sequence) position: , mismatch: 10, identity: 0.706

gtcgccgtgcagccagccaccaccgccaccggcg	CRISPR spacer
ccgatgatgcagccggccaccaccgccaccagca	Protospacer
 . .. .*******.***************.**.

286. spacer 10.9|3114882|35|NZ_CP012506|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022607 (Mycobacterium branderi strain JCM 12687 plasmid pJCM12687) position: , mismatch: 10, identity: 0.714

acttgcgcgcacaacgcatccgccatccacggggc	CRISPR spacer
gtcaccgcgcacaacacattcgccatccacacggt	Protospacer
...  **********.***.**********. **.

287. spacer 12.6|3740365|32|NZ_CP012506|CRT matches to NZ_CP016083 (Streptomyces sp. SAT1 plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.688

ttttctcccgcgacggtgggggtggcgccggc	CRISPR spacer
aggacggccgcggcggtggcggtggcgccgta	Protospacer
    *  *****.****** **********

288. spacer 12.6|3740365|32|NZ_CP012506|CRT matches to NZ_CP030354 (Novosphingobium sp. P6W plasmid pP6W1, complete sequence) position: , mismatch: 10, identity: 0.688

ttttctcccgcgacggtgggggtggcgccggc	CRISPR spacer
ctgctggccgcgacggtgctggtggcgccgat	Protospacer
.* ..  ***********  **********..

289. spacer 12.6|3740365|32|NZ_CP012506|CRT matches to NC_013855 (Azospirillum sp. B510 plasmid pAB510a, complete sequence) position: , mismatch: 10, identity: 0.688

ttttctcccgcgacggtgggggtggcgccggc	CRISPR spacer
tcgcggatcgggatggtgggggtggcgccgga	Protospacer
*. .   .** **.*****************

290. spacer 12.6|3740365|32|NZ_CP012506|CRT matches to NZ_CP032348 (Azospirillum brasilense strain MTCC4039 plasmid p4, complete sequence) position: , mismatch: 10, identity: 0.688

ttttctcccgcgacggtgggggtggcgccggc	CRISPR spacer
gcgagggcggcgacggtgggcgtgtcgccggc	Protospacer
 .     * *********** *** *******

291. spacer 12.6|3740365|32|NZ_CP012506|CRT matches to NZ_CP023408 (Streptomyces fungicidicus strain TXX3120 plasmid p1, complete sequence) position: , mismatch: 11, identity: 0.656

ttttctcccgcgacggtgggggtggcgccggc	CRISPR spacer
cgcagcagcgcgacggtgtcggtggcgccggt	Protospacer
. .  .  **********  ***********.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

2936211 : 2971577

Tupanvirus(11.11%)

protease,transposase,capsid,terminase,tRNA,integrase,head

attL 2965012:2965039|attR 2975994:2976021

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003413486.1\|2936211_2938290_-\|tRNA	threonine--tRNA ligase	A0A2K9L6B6	Tupanvirus	2.5e-104	34.9
WP_003413487.1\|2938398_2938626_+	hypothetical protein	NA	NA	NA	NA
WP_031659639.1\|2938622_2940008_-	PE family protein	NA	NA	NA	NA
WP_003413569.1\|2940352_2940853_+	DUF1990 family protein	NA	NA	NA	NA
WP_003413574.1\|2940869_2941310_-	DoxX family membrane protein	NA	NA	NA	NA
WP_003901437.1\|2941456_2942134_+	transcriptional regulator	NA	NA	NA	NA
WP_003413583.1\|2942118_2942472_-	cupin domain-containing protein	NA	NA	NA	NA
WP_003413586.1\|2942484_2942910_-	hypothetical protein	NA	NA	NA	NA
WP_003901438.1\|2942906_2943581_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_003413589.1\|2943658_2944480_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_003413592.1\|2944615_2945509_+	universal stress protein	NA	NA	NA	NA
WP_003413594.1\|2945511_2946330_-	universal stress protein	NA	NA	NA	NA
WP_003899401.1\|2946344_2947526_-\|protease	site-2 protease family protein	NA	NA	NA	NA
WP_003413598.1\|2947584_2948016_-	CBS domain-containing protein	A0A2I6B2H4	Macacine_betaherpesvirus	1.9e-75	100.0
WP_003899402.1\|2948529_2949771_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_003899403.1\|2950080_2950443_+	hypothetical protein	NA	NA	NA	NA
WP_003902322.1\|2950789_2951914_+	hypothetical protein	NA	NA	NA	NA
WP_003413614.1\|2951915_2952455_+	hypothetical protein	NA	NA	NA	NA
WP_003413616.1\|2952594_2953893_+	RtcB family protein	A2RQD0	Archaeal_BJ1_virus	3.8e-90	43.3
WP_003413619.1\|2953931_2954213_-	DUF1876 domain-containing protein	NA	NA	NA	NA
WP_003413625.1\|2954357_2954843_-	hemerythrin domain-containing protein	NA	NA	NA	NA
WP_003902325.1\|2954869_2955127_-	hypothetical protein	NA	NA	NA	NA
WP_025096392.1\|2955127_2957464_-	PE family protein	NA	NA	NA	NA
WP_003899405.1\|2957492_2957735_+	hypothetical protein	NA	NA	NA	NA
WP_003899406.1\|2957735_2958413_+	membrane protein	NA	NA	NA	NA
WP_003413654.1\|2958608_2959265_+	DedA family protein	NA	NA	NA	NA
WP_003413657.1\|2959427_2959874_+	anti-sigma factor antagonist	NA	NA	NA	NA
WP_003413663.1\|2960048_2960381_-	YnfA family protein	NA	NA	NA	NA
WP_003413665.1\|2960500_2960860_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003413675.1\|2960961_2961420_+	glyoxalase/bleomycin resistance/dioxygenase family protein	NA	NA	NA	NA
WP_003899407.1\|2961555_2961936_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003413686.1\|2961932_2963429_+	ACR3 family arsenite efflux transporter	A0A2H4PQT9	Staphylococcus_phage	5.1e-14	39.7
WP_085972563.1\|2963618_2963855_+	antitoxin MazE family protein	NA	NA	NA	NA
WP_077365235.1\|2963927_2964101_+	hypothetical protein	NA	NA	NA	NA
2965012:2965039	attL	NA	NA	NA	NA
WP_003899409.1\|2965145_2965577_+	hypothetical protein	NA	NA	NA	NA
WP_003900538.1\|2965573_2966572_+\|integrase	tyrosine-type recombinase/integrase	A0A2D1G8E2	Mycobacterium_phage	7.4e-62	47.8
WP_003900539.1\|2966585_2967050_+	ParB N-terminal domain-containing protein	NA	NA	NA	NA
WP_087902221.1\|2967182_2968443_+\|transposase	IS3-like element IS987 family transposase	Q8W6R2	Burkholderia_virus	9.6e-83	59.1
WP_003901443.1\|2968817_2970257_-\|capsid	phage major capsid protein	A0A1B3AYS4	Gordonia_phage	1.4e-66	40.6
WP_003899412.1\|2970264_2970798_-\|head,protease	HK97 family phage prohead protease	A0A2H4JB68	uncultured_Caudovirales_phage	3.1e-06	32.9
WP_003899413.1\|2970950_2971577_-\|terminase	phage terminase small subunit P27 family	V9H0V4	Actinophage	1.6e-17	47.2
2975994:2976021	attR	NA	NA	NA	NA

DBSCAN-SWA_2

3709709 : 3795778

Burkholderia_virus(28.57%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_087902221.1\|3709709_3710971_-\|transposase	IS3-like element IS987 family transposase	Q8W6R2	Burkholderia_virus	9.6e-83	59.1
WP_009937401.1\|3711264_3711426_+\|transposase	transposase	NA	NA	NA	NA
WP_003902445.1\|3711447_3712977_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_003417413.1\|3712909_3713848_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_003902446.1\|3713856_3715224_+	aspartate aminotransferase family protein	A0A1V0SKB7	Klosneuvirus	9.0e-18	25.8
WP_003417415.1\|3715292_3716510_+	D-alanyl-D-alanine carboxypeptidase DacB1	A0A1P8VVG5	Erythrobacter_phage	8.0e-10	27.3
WP_003417416.1\|3716605_3718114_+	sugar porter family MFS transporter	NA	NA	NA	NA
WP_003417418.1\|3718110_3719262_+	N-acetylglucosamine-6-phosphate deacetylase	NA	NA	NA	NA
WP_003417421.1\|3719452_3720298_-	DUF732 domain-containing protein	NA	NA	NA	NA
WP_003900026.1\|3720772_3721213_+	heavy metal-responsive transcriptional regulator	NA	NA	NA	NA
WP_003417435.1\|3721246_3722116_-	inner membrane protein YhjD	NA	NA	NA	NA
WP_003417440.1\|3722136_3723147_-\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA
WP_009940431.1\|3723431_3724064_+	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_003417452.1\|3724130_3725360_-	NADP-dependent isocitrate dehydrogenase	NA	NA	NA	NA
WP_003900028.1\|3725642_3726992_+	bifunctional o-acetylhomoserine/o-acetylserine sulfhydrylase	A0A0B5JD48	Pandoravirus	2.5e-12	26.5
WP_003417458.1\|3727003_3728143_+	homoserine O-acetyltransferase	NA	NA	NA	NA
WP_003417461.1\|3728139_3728871_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_025234886.1\|3728879_3736493_-	PPE family protein	NA	NA	NA	NA
WP_031675263.1\|3736541_3742178_-	PE family protein	NA	NA	NA	NA
WP_003417619.1\|3742607_3742865_-	DUF3017 domain-containing protein	NA	NA	NA	NA
WP_031664658.1\|3743120_3752594_-	PPE family protein	NA	NA	NA	NA
WP_049961743.1\|3753219_3753666_+\|transposase	transposase	NA	NA	NA	NA
WP_003911006.1\|3753702_3754443_-\|transposase	transposase	NA	NA	NA	NA
WP_009938650.1\|3754737_3755025_-	hypothetical protein	NA	NA	NA	NA
WP_003417738.1\|3766751_3767546_-	hypothetical protein	NA	NA	NA	NA
WP_003417739.1\|3767627_3767999_-	FAD-binding oxidoreductase	A0A0B5JBT9	Pandoravirus	3.3e-15	56.4
WP_157132559.1\|3767896_3768115_-	hypothetical protein	NA	NA	NA	NA
WP_003417741.1\|3768141_3768402_-	hypothetical protein	NA	NA	NA	NA
WP_003417745.1\|3768516_3768906_+	DUF732 domain-containing protein	NA	NA	NA	NA
WP_003417749.1\|3768919_3769213_-	DUF3017 domain-containing protein	NA	NA	NA	NA
WP_003417751.1\|3769209_3770055_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	NA	NA	NA	NA
WP_003417757.1\|3770178_3770454_+	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA
WP_003417760.1\|3770450_3770708_+	Txe/YoeB family addiction module toxin	NA	NA	NA	NA
WP_003900033.1\|3770749_3771940_+	NADH:flavin oxidoreductase	NA	NA	NA	NA
WP_003417765.1\|3772056_3772425_+	FHA domain-containing protein	NA	NA	NA	NA
WP_003417767.1\|3772421_3772973_-	pentapeptide repeat protein MfpA	NA	NA	NA	NA
WP_003417769.1\|3772979_3773561_-	ATP/GTP-binding protein	NA	NA	NA	NA
WP_003417772.1\|3773541_3773910_-	DUF742 domain-containing protein	NA	NA	NA	NA
WP_003417776.1\|3773887_3774280_-	hypothetical protein	NA	NA	NA	NA
WP_025096402.1\|3774276_3776907_-	HAMP domain-containing protein	NA	NA	NA	NA
WP_003901617.1\|3777142_3777607_+\|tRNA	tRNA (cytidine(34)-2'-O)-methyltransferase	NA	NA	NA	NA
WP_009938654.1\|3777973_3779749_+	PE family protein	NA	NA	NA	NA
WP_003417881.1\|3779749_3780394_-	nitroreductase family protein	NA	NA	NA	NA
WP_003417882.1\|3780392_3780827_+	TIGR03667 family PPOX class F420-dependent oxidoreductase	NA	NA	NA	NA
WP_003908228.1\|3780915_3784155_-	error-prone DNA polymerase DnaE2	A0A1C9LWS4	Streptomyces_phage	1.6e-118	32.4
WP_003900036.1\|3784346_3785687_+	wax ester/triacylglycerol synthase family O-acyltransferase	NA	NA	NA	NA
WP_003417892.1\|3785728_3786904_+	trehalose-phosphatase	NA	NA	NA	NA
WP_003417895.1\|3786957_3787062_+	PE family protein	NA	NA	NA	NA
WP_003900037.1\|3787140_3787782_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
WP_003417897.1\|3787782_3788031_+	enoyl-CoA hydratase	NA	NA	NA	NA
WP_003417900.1\|3788035_3789463_+	amidase	NA	NA	NA	NA
WP_003417903.1\|3789570_3790224_+	HAD family phosphatase	NA	NA	NA	NA
WP_003417905.1\|3790262_3791768_-	type B diterpene cyclase	NA	NA	NA	NA
WP_003417908.1\|3791772_3792663_-	diterpene synthase	NA	NA	NA	NA
WP_078750126.1\|3792671_3794465_-	1-deoxy-D-xylulose-5-phosphate synthase	NA	NA	NA	NA
WP_144061628.1\|3794516_3795778_-\|transposase	IS3-like element IS987 family transposase	Q8W6R2	Burkholderia_virus	9.6e-83	59.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP012506

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

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Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection