CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP011456	Anabaena sp. WA102, complete genome	48 crisprs	c2c9_V-U4,RT,cas14j,cas3,cas10,cmr3gr5,cmr5gr11,csm3gr7,csx1,WYL,csx18,cas1,cas2,cas14k,PD-DExK,2OG_CAS,cas14i,cas8b3,DEDDh,cas10d,csc2gr7,csc1gr5,cas6,cas4,csa3,cmr4gr7,DinG,c2c5_V-U5,Cas9_archaeal	11	24	6	3
NZ_CP011457	Anabaena sp. WA102 plasmid, complete sequence	1 crisprs	DEDDh,RT	0	1	1	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP011456_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011456_1

208745-208888

Orphan

Consensus_repeat	Method
AGATAATACCCAAGCTAATACCCCTCGTAATAATCCTAGTCCTAGAAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP011456_1

>merge|NZ_CP011456|1|208745-208888|CRISPRCasFinder
AGATAATACCCAAGCTAATACCCCTCGTAATAATCCTAGTCCTAGAACTGAATCTAAACCTGTCACATTGTTCCCCAATTTAATTAGTAATATTCCAGATAATACCCAAGCTAATACCTCTCGTAATAATCCTAGTCCTAGAAC

>NZ_CP011456|1|1|208745-208888|CRISPRCasFinder
AGATAATACCCAAGCTAATACCCCTCGTAATAATCCTAGTCCTAGAAC	TGAATCTAAACCTGTCACATTGTTCCCCAATTTAATTAGTAATATTCC
AGATAATACCCAAGCTAATACCTCTCGTAATAATCCTAGTCCTAGAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011456.1\|WP_053537585.1\|213412_214198_+\|HAD-hydrolase-like-protein	unknown	unknown	gnl\|CDD\|223620
NZ_CP011456.1\|WP_053537584.1\|211143_213192_-\|FHA-domain-containing-protein	unknown	unknown	gnl\|CDD\|238017
NZ_CP011456.1\|WP_053537588.1\|216412_217882_-\|D-alanyl-D-alanine-carboxypeptidase/D-alanyl-D-alanine-endopeptidase	unknown	unknown	gnl\|CDD\|224938
NZ_CP011456.1\|WP_053537575.1\|197864_198560_+\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|99749
NZ_CP011456.1\|WP_027403494.1\|199562_199880_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053537574.1\|195163_197599_-\|phenylalanine--tRNA-ligase-subunit-beta	unknown	unknown	gnl\|CDD\|234804
NZ_CP011456.1\|WP_053537589.1\|217883_220688_-\|replicative-DNA-helicase	unknown	unknown	gnl\|CDD\|236093
NZ_CP011456.1\|WP_053537586.1\|214227_214848_-\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP011456.1\|WP_053537590.1\|220974_221433_-\|50S-ribosomal-protein-L9	unknown	unknown	gnl\|CDD\|234659
NZ_CP011456.1\|WP_081424338.1\|201461_201674_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|319862
NZ_CP011456.1\|WP_053541147.1\|198839_199568_+\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|226983
NZ_CP011456.1\|WP_053537591.1\|221653_221944_-\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl\|CDD\|226194
NZ_CP011456.1\|WP_053537580.1\|206610_207417_+\|trypsin-like-peptidase-domain-containing-protein	unknown	unknown	gnl\|CDD\|379142
NZ_CP011456.1\|WP_053541148.1\|206028_206586_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372967
NZ_CP011456.1\|WP_053537579.1\|204272_205808_+\|protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP011456.1\|WP_053537578.1\|202561_203518_+\|NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|223528
NZ_CP011456.1\|WP_053537576.1\|199941_201060_-\|magnesium-chelatase-ATPase-subunit-I	unknown	unknown	gnl\|CDD\|177020
NZ_CP011456.1\|WP_053537587.1\|215074_216250_+\|DNA-double-strand-break-repair-nuclease-NurA	unknown	unknown	gnl\|CDD\|214920
NZ_CP011456.1\|WP_053537582.1\|209515_210079_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053537583.1\|210496_210946_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP011456.1\|WP_053537585.1\|213412_214198_+\|HAD-hydrolase-like-protein	gnl\|CDD\|223620	COG0546, Gph, Predicted phosphatases [General function prediction only].	4.57724e-05
NZ_CP011456.1\|WP_053537584.1\|211143_213192_-\|FHA-domain-containing-protein	gnl\|CDD\|238017	cd00060, FHA, Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins localize to the nucleus, where they participate in establishing or maintaining cell cycle checkpoints, DNA repair, or transcriptional regulation. Members of the FHA family include: Dun1, Rad53, Cds1, Mek1, KAPP(kinase-associated protein phosphatase),and Ki-67 (a human nuclear protein related to cell proliferation).	3.88064e-12
NZ_CP011456.1\|WP_053537588.1\|216412_217882_-\|D-alanyl-D-alanine-carboxypeptidase/D-alanyl-D-alanine-endopeptidase	gnl\|CDD\|224938	COG2027, DacB, D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) [Cell envelope biogenesis, outer membrane].	5.18663e-120
NZ_CP011456.1\|WP_053537575.1\|197864_198560_+\|Uma2-family-endonuclease	gnl\|CDD\|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	2.212e-15
NZ_CP011456.1\|WP_053537574.1\|195163_197599_-\|phenylalanine--tRNA-ligase-subunit-beta	gnl\|CDD\|234804	PRK00629, pheT, phenylalanyl-tRNA synthetase subunit beta; Reviewed.	0
NZ_CP011456.1\|WP_053537589.1\|217883_220688_-\|replicative-DNA-helicase	gnl\|CDD\|236093	PRK07773, PRK07773, replicative DNA helicase; Validated.	1.16771e-148
NZ_CP011456.1\|WP_053537586.1\|214227_214848_-\|tetratricopeptide-repeat-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	1.15044e-19
NZ_CP011456.1\|WP_053537590.1\|220974_221433_-\|50S-ribosomal-protein-L9	gnl\|CDD\|234659	PRK00137, rplI, 50S ribosomal protein L9; Reviewed.	2.40941e-55
NZ_CP011456.1\|WP_081424338.1\|201461_201674_-\|hypothetical-protein	gnl\|CDD\|319862	cd16383, GUN4, porphyrin-binding protein domain GUN4. GUN4 is a porphyrin-binding protein involved in chlorophyll biosynthesis regulation and intracellular signaling, found in aerobic photosynthetic organisms. It has been implicated in retrograde signalling between the chloroplast and nucleus. GUN4 can bind protoporphyrin IX (PIX) and magnesium protoporphyrin IX (MgPIX), substrate and product of the Mg-chelatase, as well as heme and cobalt protoporphyrin IX (CoPIX). It may play a role in protecting plants from reactive oxygen species (ROS)-mediated damage.	7.56682e-29
NZ_CP011456.1\|WP_053541147.1\|198839_199568_+\|Uma2-family-endonuclease	gnl\|CDD\|226983	COG4636, Uma2, Endonuclease, Uma2 family (restriction endonuclease fold) [General function prediction only].	1.34925e-15
NZ_CP011456.1\|WP_053537580.1\|206610_207417_+\|trypsin-like-peptidase-domain-containing-protein	gnl\|CDD\|379142	pfam13365, Trypsin_2, Trypsin-like peptidase domain. This family includes trypsin-like peptidase domains.	8.07088e-16
NZ_CP011456.1\|WP_053541148.1\|206028_206586_+\|hypothetical-protein	gnl\|CDD\|372967	pfam14218, COP23, Circadian oscillating protein COP23. This family includes the circadian oscillating protein COP23 from Cyanothece sp. (strain PCC 8801). The levels of this peripheral membrane protein display a circadian oscillation.	1.37217e-38
NZ_CP011456.1\|WP_053537579.1\|204272_205808_+\|protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	2.68798e-66
NZ_CP011456.1\|WP_053537578.1\|202561_203518_+\|NAD(P)-dependent-oxidoreductase	gnl\|CDD\|223528	COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism].	2.33865e-18
NZ_CP011456.1\|WP_053537576.1\|199941_201060_-\|magnesium-chelatase-ATPase-subunit-I	gnl\|CDD\|177020	CHL00081, chlI, Mg-protoporyphyrin IX chelatase.	0
NZ_CP011456.1\|WP_053537591.1\|221653_221944_-\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl\|CDD\|226194	COG3668, ParE, Plasmid stabilization system protein [General function prediction only].	3.94006e-13
NZ_CP011456.1\|WP_053537587.1\|215074_216250_+\|DNA-double-strand-break-repair-nuclease-NurA	gnl\|CDD\|214920	smart00933, NurA, NurA nuclease. This family includes NurA a nuclease exhibiting both single-stranded endonuclease activity and 5'-3' exonuclease activity on single-stranded and double-stranded DNA from the hyperthermophilic archaeon Sulfolobus acidocaldarius.	5.49057e-46

>NZ_CP011456.1|WP_053537580.1|206610_207417_+|trypsin-like-peptidase-domain-containing-protein
MSWRIGMVAVFAIAGSVLPLAPVSSVPKPPFSMVNLWSGQEQIQLEQEARLITVKILSSPREKRDRSLGSGVLFYQDKLTSTYGVITNNHVLQAGEAPYSIQTPDGKIYRANSVVRKKQLRGNGLDLALLEFVADSEYRIATKSNQQAAIGAWVMSAGFPLKNSQSKSGRFVIKPGKIQLVLDKALEGGYQIGFTNDVEKGMSGGPLLNGAGELVGINGLHANPIWGDPYVFEDGSYPTDAQREQISQYSWGIPLETVKQLLFAKGNS
>NZ_CP011456.1|WP_053541148.1|206028_206586_+|hypothetical-protein
MKNNLSAPLTGLALALSVTLASNQPSQAQSRQFTCGLSDNYPVTVVRHPTRGSVALIVWTNTSQISDTWTPQKRCQEVSDRFQKLQNKGELKILKTGTVNGQYVICGLGTNQRACDKKNVLLTMTKDRDPKQVLEQLLNTRVAASGEAVYLSGDQEGHIKPTINRDGTASVDIDQVINGKSEPIW
>NZ_CP011456.1|WP_053537579.1|204272_205808_+|protein-kinase
MREIQGQLPILAGNKGRYQLLRPLGGGSFGDTFLAIDLNTLNQRRCVVKRLRIESHHSPEIVAGIKKAFEREAQVLEDLGDKSGNIPSLYDYFSLTVTDPQLNTQQEFNYLVQQYIEGEDLSKELEQQGRFSEAKVLTLLNNILPGLDFIHNHNVIHRDIKPSNIVRSNAEDDKFYLIDFGAVKQVIKGDISTTEKSIVFGTISYAPPEQIKKEKVDYSSDLYALAASCVQLLTGEFPDDSRDVNNLWNWQKYPYISEHLGKILRRMLQEDPYYRFQSAREVMEALNKPDDKPPGLSPRTNNGDKTIIIPPPQPQFIKVLLITAIILTAAGVFITLYSDQIQNSQGSIKTIPGKLFTDKQFGIEIKYPQDWKAEKQEYSPLTGGTIAKIFPNTSSLNLEVGLFIRIEDIQKSQTLSEYNQAAIEQIKKSVRNVQILEQKSKKLDDREGYQIVYTGQDQIHNFRFKSMEVWTISDSKVYILTYRAEEKLYDPFLKDVEQTMMRSFHIEPIGL
>NZ_CP011456.1|WP_053537578.1|202561_203518_+|NAD(P)-dependent-oxidoreductase
MTKKRILVTGASGCIGHYISEALIQNTNHELYLLVRNPNKLQVDTTVRPGITILQGDMQEIGKFSNLLKTIDIAVLTATSWGGEGIFDINVFKTLELMNLLNPERCEQVIYFSTASVLNNENKPLKEAGEIGTDYIRSKYDCLHQIEKLAIFPKITTVFPTLVLGGDDKKPYSHLTSGIPEVTNYINFIRFLQADGSFHFIHGKDIATVIQYLIDYPPQQGDPRRFVLGQSSLTANQAIEEVCAYFRKKIYFRIPLSLGLANVIIAVFRIQMAAWDRFCMNYRHFSYANAINPSSFNLPNYCATMTDVLKISSVKAGI
>NZ_CP011456.1|WP_081424338.1|201461_201674_-|hypothetical-protein
MVANREKEGWLNVKSIDSFPCDDLRIIDGLWVKYSNGRFGFSVQKLIVAECGISLLKIILVSQQFQLFFR
>NZ_CP011456.1|WP_053537576.1|199941_201060_-|magnesium-chelatase-ATPase-subunit-I
MTSTAQASASARRAVFPFTAIVGQEEMKLALLLNVIDPKIGGVMIMGDRGTGKSTTIRALADLLPEIPVVANDPFNSDPSDTDLMSDEVRQQVAQGLEIPVTHKKVQMVDLPLGATEDRVCGTIDIEKALSEGVKAFEPGLLAKANRGILYVDEVNLLDDHLVDVLLDSAASGWNTVEREGISIRHPAKFVLVGSGNPEEGELRPQLLDRFGMHAEIRTVKEPALRVQIVEERGEFDQNPPVYLEKHQAPQVALQEKIVNAQNLLPQVNLDYDFRVKISEVCSELDVDGLRGDIVTNRAAKALTAFEGRTEVTVDDIRRVITLCLRHRLRKDPLESIDTGYKVEKVFCRVFGVELPEDSTQKTGAGVKAGAR
>NZ_CP011456.1|WP_027403494.1|199562_199880_-|hypothetical-protein
MRTWNFWLNSLILFIQDHPPRFVELLMLTLAIALLTVSTIVPDKPYIILGLSFVVGASTSILVREAMSPTGNNHTVLTQQRLTQFTALLLLGISIYGFADLIHTL
>NZ_CP011456.1|WP_053541147.1|198839_199568_+|Uma2-family-endonuclease
MSIMLKYSQSNCLPSSKELPDSDDTPVDNELQDLIPGLLKAMLALIWFQRWDWFFGVDMGIYYDPDKPAIVPDGFLSIGIPRLIDEDLRRSYVLWEEQKLPILVLEIVSHTYRGEYSTKKDFYAQELGILYYVVYNSQRKRKQRLEVYKLVNGEYKLLSGNPVFLPEIGLGIGMEKATYQGITREWLYWFDENGKRFLTPEERMQQSEEKHLESERKWLESEEKANKLAKMLKKLGVDPENL
>NZ_CP011456.1|WP_053537575.1|197864_198560_+|Uma2-family-endonuclease
MVQQLSAETTPEIIYPDSDGQPMADNTKQYQWIVKIKENLEILFASRDDVFIAGDLLWYPIEGSVKTCQAPDVMVVFGRPKVDRGSYQQWKENNIPPQVVFEILSPGNRTPKMINKSLFYQRYGVEEYYIYDPDTLELSGFVRYQDAFIAIEDINGWISPRLGIRFQLVLDNLEIYYPDGNKFLTSVEFDQLAKQEYQRAEQERQEKQVVIQQYQELLAKLQEKGIDLDNL
>NZ_CP011456.1|WP_053537574.1|195163_197599_-|phenylalanine--tRNA-ligase-subunit-beta
MRISLNWLKELVEIKLTPEELAETLTMAGFEVEDIEDRRTWANGVVVGKVLERQPHPNADKLSVCTVDIGAAETVNIVCGAANVRADIYVPVATTGTYLPNIDLKIKPAKLRGVPSNGMICSLKELGLPTDIDGIHIFPEENMVVGSDVRPLLGLEDVILDVTATANRADALSMVGIAREVAALTGGKLSIPPIAEVENTKTAKSITLKISETQACPAYIGTVVENIKIAASPEWLQQRLRAAGVRPINNVVDITNYVLLERGQPLHAFDKERLQSVGGGENLIIGVRFAETGETLKTLDGNIRNLSTQNLLITANNQAVALAGVMGGAETEVHEGTQSLVLEAALFDSVAIRRSSRSAGLRSEASGRYERGVNRAELEIACHRALSLISELAAGVIVQQEISDYRPDISTWSHSINLRLDKVNEVLGPIELGLETGELQGSDVEKILTALGCKLAKIDDRNWTVTVPPYRYRDLEREIDLIEEIARLYGYDKFCDTLPEKSEAGYLSLEQELIRRLRAYLRAEGLTELIHYSLVKPGEDKQIILSNPLFAEYSALRTDLISGLITAFQYNIEQGNGALNGFEIGRIFWREEEGLQEAEILAGIIGGDITVGKWSRGGKEEAITWFEAKGILESVFKQLKLTVEFQPENRDSRLHPGRTASLWVKGSRLGTFGQIHPQLRREKDLPEAVYVFQLDLDALLDAWDHDDLLVPKFSSYSTYPASDRDLAFFAPVKVTVSEIEKVINKAGKGLLNSVELFDEYRGEHVPTGQRSLAFRLVYRASDRTLTENEIEPVHNQVRTALVEKFGVNLRS
>NZ_CP011456.1|WP_053537582.1|209515_210079_-|hypothetical-protein
MNHQNFLAFVTSSIFMVGLTLGCRSHATTTTVIPSLQPDANGNFAPNAIQGQNTPLKLAAKVFNVQDSFVLKGFDAVAYFQQGKAIPGNDNFTYKWQNVNWRFSTAENRNLFIKNPEKYAPQYGGFCAWAVSRGYTAPIDPNAWKIVDGKLYLNANLDTQKRWEKDIPGNIQKADQNWPGIAGKIRR
>NZ_CP011456.1|WP_053537583.1|210496_210946_-|hypothetical-protein
MTPTLFGRWQTRIFLLATVGMLVSLLFYKGYLGIASNLVYFWVVFYVGLFGIAWDVLYDFLQKYLWDHDWPGVFQLYAGVIEGVFLALIIANIGLPHIPKSEFDLIRFIQHYGLVWLAVYLSAWVVMRLLFPRWRFRGGEWIGKWPRIS
>NZ_CP011456.1|WP_053537584.1|211143_213192_-|FHA-domain-containing-protein
MQIKLISENKLTEEQEEQVFTLPVAIGRDITQLPAVLNGETVSPVVLLDSNKQISRFHAQITLDNNELYVEDKSANGTQVNGEKLLNQSRTLNSGDRLAIGNHTITVILIRSEDENATVVLENNSTIFNPQSEIIPVSRVRKLPDSQSSIIFNPYTDALEQQTPDAVPSQPAGFPYNLNFWNGEKVSPEAIRRSGILVRETEYVACGGGMGSFVWVDMLRIAGVKPENIKVLSIQDKPYKRYESLLKNCQIPRHKRIRSGSDSCPDNIWGWPGYALRDVWRAFFSGQVGAALGFLWQVFAEPVYADTYTPRGKDVFESMDRESDRIGWGKMLEYGSIRSLRQTEDGRYCIAYSTSNQEDGNHQFLLAKYVHLCTGYPAIKLLEDLEQYRQQYPEETGNKRTVVQGYEPHDHIYQQLEKKGGTIVLRGSGIVASQILERLYEARKIQGNIQVIHLNREPRKGNQFEQAKRHVENDWEFQPFNWPKGTWGGDMRTMLEAADPLRRRELLQGWGGTTTASRKKWRDIIRQGIAQKWYEIRYGVVTKLERNSQGQVITHVVTNKGQKTLTADFVIDCTGLISNPLESPFLKDLILHYDLELNPQGRFHVENNFEVKKLRNNRSRIYGAGIITLGGPYAPVDTFLGLQYAAHRSMEALAAAKAPGVRYIQGIYSLWQWLKWALNQKP
>NZ_CP011456.1|WP_053537585.1|213412_214198_+|HAD-hydrolase-like-protein
MTANSPMILALDFDGVVCDGLIEYFEVAWRTYCQIWSPANDTPPDDLALRFYRLRPVIETGWEMPVLIKALIEGFSDDQILQSWTNITPQILAADNLEAKAVSTKLDHLRDEWIQTDLDGWLSLHRFYPGVIERLKITLKSEIQLYIVTTKEGRFVKELLQQEGVNLPPENIFGKEIKRPKYETLRELIKKANIQSASLWFVEDRLKTLQLVQQQSDLNHVQLFLADWGYNTQSEREAGKNDPRIHLISPSHFTHDFSTWL
>NZ_CP011456.1|WP_053537586.1|214227_214848_-|tetratricopeptide-repeat-protein
MKKWRLTITTLILGTILYSPSVCAKNLANISDFRIKSSLLAQSDLKDAIVYFHQGINRHTFGDIKGAIEEYNKALRLHPNFPEVYYKRGISRYKLGDLKGAIADYNKAISLNANYPGIYNHRGFTRHDLGDLKGAIADFNQALLLNPNFPEAYQNRGVSRNKLGDKKGAITDLKTAANLFQQQKRISNYQEVIDLIKKTENRSPTS
>NZ_CP011456.1|WP_053537587.1|215074_216250_+|DNA-double-strand-break-repair-nuclease-NurA
MLDLTKISRQMQGFSQHLTSEVAASHQRLELAQQYLKKAFECQEQLVKRQEEWRNRIIFANATPIEPLETCITIPVPPKVHTVISTDGSQISPNHHEIAYCYLLNIGRVVLHYGQNLHPILDSLPEVFYRPEDLYISRQWGIRTDEWMGYRRTASEATVLAELACSAKTAAPVLAMTDGSLIYWFLDQLPMDARDMILPPVLEAWQKLQQAQIPLMGYLSASRSTEATNFLRFLACPHPVPDCITHCPNQLEYVPCKKFDTLRDTTIMTTQLQPGQRGPLWRSNARILELYDEQIIYFCYVHVGTEIARIEVPAWVAENSIMFDQALGLMLAQVHKGYGYPVAIAEAHNQAVVRGGDRTRFFALLERQMIKAGIKNVGISNKEARKRGSIA
>NZ_CP011456.1|WP_053537588.1|216412_217882_-|D-alanyl-D-alanine-carboxypeptidase/D-alanyl-D-alanine-endopeptidase
MSKKNYFSLILLFVSINIGSIQKIAKAQTPVPEVTNTKSICPAQLSSAINTIINHPQFSRVRWGILIKPLSSEKILYSQDSQKYFIPASNMKLFTTAAALQQLGADFRIHTSIYDDGNGVLRVVGRGDPSFKNAQLTILSKQLYTQGIRQINQLIADDSYFQGEVVNPSWEWEDIQADYGAPINSFILNENATVLTFLPQTIGEPLKLKWTEPTEAYRWKIENNSVTTEADKPSFVEVNRDLKGQILRIKGQLAINSQPEITGLAVFDPVANFIRQFRQNLSRQGITVKETVIKNLSQNKQEKEIAAVESPPLSELLLETNVNSNNLYAEALLRSLAIKKPEEKNQNTADVGLQVVRETLTQLGVAPAGYVIVDGSGLSRKNLTTPAALVQLLQGIDKSPQAAVFRASLPISGVKGSLKNRFLNTAAAGIVQAKTGSMTGISTLSGYMNAPDYEPLVFSIMVNQSEQPGKVMRTAIDEIVVLLSELKRC
>NZ_CP011456.1|WP_053537589.1|217883_220688_-|replicative-DNA-helicase
MAEELSFQGDGSNRVPPQNIEAEEAILGGILLDPEAIGRVSDRLVPEAFYISAHTTIYQAALRLHTQQKPTDLLSITSWLTDNDQLTQIGGRNKLATLVDRTVSAVNIDALAGLVMEKYLRRQLIKAGNEIVHLGFETETELPIVLDNAEQKVFNVTQQKTQSGLVHIGDTLINTFQDIETRHQGIALPGIPCGFYDLDAMTSGFQRSDLIIVAGRPSMGKCLSYDSEIVLADGQIATIEELYQQRQGSLLTLNDDWKFTFTQPSAFVDDGIKPVFRITTRLGRAIETTITHPFLTIKGWQRLENLQVGNKIAIPRKIDVFGTETIRECEVKLLADSLEKSDTKTVPNIVFKLEKSQLSLFLNRLFATDGWATVLNSGQSQLGYCTVSEKLARQIQHLLLRFGIIAALEKRSVKYNNTRRPAWQLDITDALSIKHFIAEIGIFGKEAALAKVTAAISQKRYQTNRDLIPIEIWEQIAAAKGSETWSSLAKRAGIKSYTNIHVGKRALKRERLWILATALDNLPLQQLANSDVYWDEIISIESVGNKQVYDLTIPETHNFIANDICVHNTAFCLNLAHNIAAGYQLAVAVFSLEMSKEQLVQRLLASEAGIESSYLRSGRISQTQWEPLSRAIDKLSDTPIFIDDTANITVTQMRSQARRLQAEQTKELGLIVIDYLQLMEGSSDNRVQELSRITRSLKGLARELSVPIIALSQLSRGVEARTNKRPMLSDLRESGCLSGDSLVTLADTGLQVPIKELVGKSDFAVWGLNENTMKLERAIVSNAFSTGIKPVFTLTTRLGREIRATGNHKFLTINGWKRLDELNLQQQLIALANSDIYWDELISIELDGEEEVFDLTVDKLHNFIANNIIVHNSIEQDADIVMMLYRDEYYSPDTPDRGIAEVIIAKHRNGPTGTIKLLFDPQFTKFKNLAKPSW
>NZ_CP011456.1|WP_053537590.1|220974_221433_-|50S-ribosomal-protein-L9
MAKRVQLVLTKDVTKLGKLGDLVEVAPGYARNYLIPQSLAARATPGLLKQVERRREKEYQRQLELKQQATEQKTALENIAGLKIAKQVGENEAIFGTVTTQDVADAIQAAANLEIDRRGITIPDISQLGTYKAEIKLHSEVTAVINIEVVSN
>NZ_CP011456.1|WP_053537591.1|221653_221944_-|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MSEIVWTETATNDLNRHYDFIALSNADAAVRAVQAIVSSGGSLQQNPRRGAIVDEIVGLRKLIVAFGKYGFIIHYVILEDDVIILRIYHGRENRPI

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Crispr_ID: NZ_CP011456_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011456_2

542859-542935

Orphan

Consensus_repeat	Method
ATTCCTCAAGTGCAAACACAAGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP011456_2

>merge|NZ_CP011456|2|542859-542935|CRISPRCasFinder
ATTCCTCAAGTGCAAACACAAGTAATAGAGGAAGTAATACCTGAACCAGTGATTATTCCTCAAGTGCAAACCCAAGT

>NZ_CP011456|2|2|542859-542935|CRISPRCasFinder
ATTCCTCAAGTGCAAACACAAGT	AATAGAGGAAGTAATACCTGAACCAGTGATT
ATTCCTCAAGTGCAAACCCAAGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011456.1\|WP_053537787.1\|551164_552832_+\|PfaD-family-polyunsaturated-fatty-acid/polyketide-biosynthesis-protein	unknown	unknown	gnl\|CDD\|240093
NZ_CP011456.1\|WP_053537783.1\|537963_538161_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053537790.1\|555420_556011_+\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|99749
NZ_CP011456.1\|WP_053537789.1\|554544_555336_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223377
NZ_CP011456.1\|WP_053541161.1\|546307_547660_+\|polyketide-synthase	unknown	unknown	gnl\|CDD\|238429
NZ_CP011456.1\|WP_053537781.1\|533176_534181_-\|NAD-dependent-epimerase/dehydratase-family-protein	unknown	unknown	gnl\|CDD\|187539
NZ_CP011456.1\|WP_081424113.1\|557923_559741_-\|N-6-DNA-methylase	unknown	unknown	gnl\|CDD\|280533
NZ_CP011456.1\|WP_053537777.1\|528454_529711_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|340842
NZ_CP011456.1\|WP_053537780.1\|532189_533152_-\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|366154
NZ_CP011456.1\|WP_053537788.1\|552834_554349_+\|NAD-dependent-epimerase/dehydratase-family-protein	unknown	unknown	gnl\|CDD\|225857
NZ_CP011456.1\|WP_039204155.1\|535748_536960_-\|ABC-exporter-membrane-fusion-protein	unknown	unknown	gnl\|CDD\|213754
NZ_CP011456.1\|WP_053537779.1\|531365_531833_-\|DUF2141-domain-containing-protein	unknown	unknown	gnl\|CDD\|227048
NZ_CP011456.1\|WP_053537791.1\|556578_557799_+\|geranylgeranyl-reductase	unknown	unknown	gnl\|CDD\|177713
NZ_CP011456.1\|WP_053537782.1\|534376_535555_-\|FtsX-like-permease-family-protein	unknown	unknown	gnl\|CDD\|130253
NZ_CP011456.1\|WP_053537786.1\|547664_550979_+\|type-I-polyketide-synthase	unknown	unknown	gnl\|CDD\|225858
NZ_CP011456.1\|WP_053537778.1\|530019_531279_-\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|224136
NZ_CP011456.1\|WP_053537775.1\|525296_525938_+\|transcription-antitermination-protein-NusB	unknown	unknown	gnl\|CDD\|182007
NZ_CP011456.1\|WP_053537776.1\|526063_527533_+\|signal-recognition-particle-docking-protein-FtsY	unknown	unknown	gnl\|CDD\|236686
NZ_CP011456.1\|WP_053537785.1\|544360_546091_+\|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|274311
NZ_CP011456.1\|WP_053537792.1\|559889_561134_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|341135

Protein	Function_ID	Function_description	E-value
NZ_CP011456.1\|WP_053537787.1\|551164_552832_+\|PfaD-family-polyunsaturated-fatty-acid/polyketide-biosynthesis-protein	gnl\|CDD\|240093	cd04742, NPD_FabD, 2-Nitropropane dioxygenase (NPD)-like domain, associated with the (acyl-carrier-protein) S-malonyltransferase FabD. NPD is part of the nitroalkaneoxidizing enzyme family, that catalyzes oxidative denitrification of nitroalkanes to their corresponding carbonyl compounds and nitrites. NDPs are members of the NAD(P)H-dependent flavin oxidoreductase family that reduce a range of alternative electron acceptors. Most use FAD/FMN as a cofactor and NAD(P)H as electron donor. Some contain 4Fe-4S cluster to transfer electron from FAD to FMN.	0
NZ_CP011456.1\|WP_053537790.1\|555420_556011_+\|Uma2-family-endonuclease	gnl\|CDD\|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	3.09817e-29
NZ_CP011456.1\|WP_053537789.1\|554544_555336_+\|SDR-family-oxidoreductase	gnl\|CDD\|223377	COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only].	1.35762e-107
NZ_CP011456.1\|WP_053541161.1\|546307_547660_+\|polyketide-synthase	gnl\|CDD\|238429	cd00833, PKS, polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.	1.56127e-135
NZ_CP011456.1\|WP_053537781.1\|533176_534181_-\|NAD-dependent-epimerase/dehydratase-family-protein	gnl\|CDD\|187539	cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs. This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	3.02232e-45
NZ_CP011456.1\|WP_081424113.1\|557923_559741_-\|N-6-DNA-methylase	gnl\|CDD\|280533	pfam02384, N6_Mtase, N-6 DNA Methylase. Restriction-modification (R-M) systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The R-M system is a complex containing three polypeptides: M (this family), S (pfam01420), and R. This family consists of N-6 adenine-specific DNA methylase EC:2.1.1.72 from Type I and Type IC restriction systems. These methylases have the same sequence specificity as their corresponding restriction enzymes.	6.10711e-54
NZ_CP011456.1\|WP_053537777.1\|528454_529711_-\|glycosyltransferase	gnl\|CDD\|340842	cd03814, GT4-like, glycosyltransferase family 4 proteins. This family is most closely related to the GT4 family of glycosyltransferases and includes a sequence annotated as alpha-D-mannose-alpha(1-6)phosphatidyl myo-inositol monomannoside transferase from Bacillus halodurans. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes.	2.65509e-62
NZ_CP011456.1\|WP_053537780.1\|532189_533152_-\|glycosyltransferase-family-2-protein	gnl\|CDD\|366154	pfam00535, Glycos_transf_2, Glycosyl transferase family 2. Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.	1.16513e-32
NZ_CP011456.1\|WP_053537788.1\|552834_554349_+\|NAD-dependent-epimerase/dehydratase-family-protein	gnl\|CDD\|225857	COG3320, COG3320, Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism].	1.19236e-137
NZ_CP011456.1\|WP_039204155.1\|535748_536960_-\|ABC-exporter-membrane-fusion-protein	gnl\|CDD\|213754	TIGR02971, devB-like_secretion_protein, ABC exporter membrane fusion protein, DevB family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. DevB from Anabaena sp. strain PCC 7120 is partially characterized as a membrane fusion protein of the DevBCA ABC exporter, probably a glycolipid exporter, required for heterocyst formation. Most Cyanobacteria have one member only, but Nostoc sp. PCC 7120 has seven members.	3.60326e-112
NZ_CP011456.1\|WP_053537779.1\|531365_531833_-\|DUF2141-domain-containing-protein	gnl\|CDD\|227048	COG4704, COG4704, Uncharacterized protein conserved in bacteria [Function unknown].	1.1838e-50
NZ_CP011456.1\|WP_053537791.1\|556578_557799_+\|geranylgeranyl-reductase	gnl\|CDD\|177713	PLN00093, PLN00093, geranylgeranyl diphosphate reductase; Provisional.	0
NZ_CP011456.1\|WP_053537782.1\|534376_535555_-\|FtsX-like-permease-family-protein	gnl\|CDD\|130253	TIGR01185, membrane_spanning_subunit, DevC protein. This model describes a predicted membrane subunit, DevC, of an ABC transporter known so far from two species of cyanobacteria. Some experimental data from mutational analysis suggest that this protein along with DevA and DevB encoded in the same operon may be involved in the transport/export of glycolipids. [Transport and binding proteins, Other].	2.75732e-140
NZ_CP011456.1\|WP_053537786.1\|547664_550979_+\|type-I-polyketide-synthase	gnl\|CDD\|225858	COG3321, COG3321, Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism].	1.80603e-152
NZ_CP011456.1\|WP_053537778.1\|530019_531279_-\|glycosyltransferase-family-2-protein	gnl\|CDD\|224136	COG1215, COG1215, Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane].	1.20472e-29
NZ_CP011456.1\|WP_053537775.1\|525296_525938_+\|transcription-antitermination-protein-NusB	gnl\|CDD\|182007	PRK09634, nusB, transcription antitermination protein NusB; Provisional.	7.39187e-97
NZ_CP011456.1\|WP_053537776.1\|526063_527533_+\|signal-recognition-particle-docking-protein-FtsY	gnl\|CDD\|236686	PRK10416, PRK10416, signal recognition particle-docking protein FtsY; Provisional.	2.84902e-152
NZ_CP011456.1\|WP_053537785.1\|544360_546091_+\|SDR-family-NAD(P)-dependent-oxidoreductase	gnl\|CDD\|274311	TIGR02813, omega-3_polyunsaturated_fatty_acid_synthase_PfaA, polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.	4.87038e-123
NZ_CP011456.1\|WP_053537792.1\|559889_561134_-\|hypothetical-protein	gnl\|CDD\|341135	cd17246, RMtype1_S_SonII-TRD2-CR2_like, Type I restriction-modification system specificity (S) subunit Target Recognition Domain-ConseRved domain (TRD-CR), similar to Shewanella oneidensis MR-1 S subunit (S.SonII) TRD2-CR2. This model contains Shewanella oneidensis MR-1 S subunit (S.SonII) TRD2-CR2 and similar TRD-CR's. S.SonII recognizes 5'... GTCANNNNNNRTCA ... 3'. The restriction-modification (RM) system S subunit consists of two variable target recognition domains (TRD1 and 2) and two conserved regions (CR1 and CR2) which separate the TRDs. The TRDs each bind to different specific sequences in the DNA. RM systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The host genome is protected from cleavage by methylation of specific nucleotides in the target sites. In type I systems, both restriction and modification activities are present in one enzyme complex composed of one DNA specificity (S) subunit (this family), two modification (M) subunits and two restriction (R) subunits. This model contains both TRD1-CR1 and TRD2-CR2. It may also include TRD-CR-like sequence-recognition domains of various type II restriction enzymes and methyltransferases and type I DNA methyltransferases. S.SonII TRD1-CR1 does not belong to this subfamily.	8.09719e-58

>NZ_CP011456.1|WP_053537783.1|537963_538161_-|hypothetical-protein
MNSEKILKQVFNHLAVANLVRSKTPVYSGIGFVSLGNPTVKNCMDFSISSVNGNQINNLSFIYKC
>NZ_CP011456.1|WP_039204155.1|535748_536960_-|ABC-exporter-membrane-fusion-protein
MAVNKERQLFNLTSLKWRIILATSLTFSTGLVSLYIFHQLKTNSQTQTPAVSSVIKSQSTPVKVAVTALGRLQPQDKITYLSAPNSVNGVRVEKLLVKEGDNVKKGQVLAYLENYARSQAAIQQTFDKLLIARTKLAQVQAGAKTGDINAQKTAITRLNSQLKGDAAAQTATINRIQAEVENAQKESDRYQQLSKAGAVSASVADTKKLVLKTTQQQLKEAEATLKRTQDTLQDQLKEGKFKLNSLKEVRTVDVELAKTEVKSAETAIKQAKADHDLTYITSTIDGTILRIHTKNGEVIGTSGFAEIGNTSKMQVLAEVYQTDIQNVRVGQKAIITSTTFPGKLQGTVREVGWQVDKQGIFSINPNSDADRRVIEVKISIDDSTDSQKISRLTNLQVDVAIQI
>NZ_CP011456.1|WP_053537782.1|534376_535555_-|FtsX-like-permease-family-protein
MNIKIPLGWLQLAQQKLRFVIAVAGIGFIVLLMFIQLGFQDALYSSATALHQRLHGDLFLVSSQYKSLTAIQSFSRTRLYQTLGFDGVDSVSSIYLQFAKLKNPVSGEKYSIYVIGFDPGKSVLDIPEVQQNLDKLKIPDVMLFDRDARPEFGPIAELFNQGNIEQAIEIFPFDAVKGYRVRVGGLFSLGPSFGVDGNLIVSDSTFLRINPNSRPVEKIDMGVIKLKDGADIKRVLANLKANLPKDVQIFTRQEFVAFERQYWSVRTPIGFILNLMLIMASVVGVVIVYQILYSNIATQFIAYATLKAIGYANGYLLNVVFQQAIILALLGYIPGFIVSIGLYDFAMRATKLPIMMTSNNALLVLVSTVLICITSGALAINKLRSADPADSF
>NZ_CP011456.1|WP_053537781.1|533176_534181_-|NAD-dependent-epimerase/dehydratase-family-protein
MNLQNKTLLITGIDEFIGLRAAELAVAQGMKVKGIQSSPVKDQTAQKLGVEIFVGNITDPAICSKACQGVDIVLHNAQFAEEAGDIKHFREINVSGTVNIAKAAKQAGVKTFVHLSTALVYGFDYSDKVTESGVLSGENNAYCQTKIEAEIEVLKLNNAPEFGVIVIRAGDVYGPGSLPWIVRPIQMMRQKLFAYANEGKGVMNHLYVDNLIDAIFLAIEKSVYGEVFNITDGKETSWKEYFIHLASLENLPAPMSLPKEEMKLFLKVRLQGQKLFRKKADILPESVDFMSRPYAYSIAKAESVLNYQAKVDLAEGMRRTHEWLQKTDLQKLMK
>NZ_CP011456.1|WP_053537780.1|532189_533152_-|glycosyltransferase-family-2-protein
MNNSQAKLSIGLPVYNGEKFLEKCLDSLLAQTFSDFELIISDNASTDNTEAICRTYAAQDQRIRYYRNETNIGCACNFNRVFELSHGEYFKWAAYDDLHAPDFIEKCMDVLEKDPTYILCHSHTYFIDEQGEFIQNYDIKLNTNSLKAHQRFHELLTKHLCYQIYGVIRSSSLRQIPPMGGYGNADGILLLRLGMLGKFYEIPEYLFFARIHPQQSLSMFFPDYLSFNQNNPQYSLNMLPNFYDYAVWFDSTNKGKILLPHWRILQEYWVSIHHSQLNWYEQILCHISIAKKLSGTEWLLVKDFLMAAKMLFLRKFSYQT
>NZ_CP011456.1|WP_053537779.1|531365_531833_-|DUF2141-domain-containing-protein
MLKIFQVSNFLLATLLTVNFTDIAYAESTGSLTVVVNGITNKTGEICMRVYNSEKGFPDNAKSEVKSGCTKITGSSIKRVFSGLKPGTYAVAVVDDQNGDRKLNKDFFGIPQEGFGISKNPTVSISTGSPTFNNSSFKVDKNTTINIFLKYSLDP
>NZ_CP011456.1|WP_053537778.1|530019_531279_-|glycosyltransferase-family-2-protein
MPDFMIFLSKSLFGWLVIQTCLTLVFLWYLRSHKPKSLPDEQLPKTAVILCLRGADPFLPNCLRSLLQQNYPEYDLKLIIDSKEDPALKIATETINQLGATNVEISILRAVRHNCSLKCSSLVQAVSDLDNAYPIIAFIDADTVAHPNWLRELVTPLIDDQVGLTTGNRWYLPTGNYWGSLVRYSGNVSTVVQMFLFQIPWGGTLAIKTEVLNRINLLDKWGEVLTDDMLLHKLIKQEKLQIKFIPSLLMLNREESSLRNLLESLKRLIIGSKLYHPRWLAIISEAYSSIIVPNAVIIVIFQLLIEAQWDAAALLFSAYISYTMGLVLLMLLMEFGIHKVLHNQGEKIPKLSPLIILKMLIVIPLTQWVYGLTILSSLWVSTITWRGLTYRIKGRENIRLIEYRPYQWLDQPIDPKASL
>NZ_CP011456.1|WP_053537777.1|528454_529711_-|glycosyltransferase
MKNKPLRIALFTGLYAPFLTGVSVAVHQRVHWLLKQGHEVFLVHPEINNKYPNQVGNRPMSGIEELETFINFSSYSFPTEPLIFYKSLPQPLNHRHWSDTKLLNHFQPDIIVVEEAPQMRGLYSGFLQGYGRSVGVQYAKKTKTPIISIFHTDIIAYIQYYFGNTFFNLVRPLLPLLVKQFSETYDLSLFSSREQLTKYQKLKAQRSEYLPYQGIDCEKFHPRNICYDPIPDDKRPTILFVGRITPEKNVNQLLDIYPLIAAKIPDVHLVIVGSGPLDAEIRRRAEKFPNGVTIWGESHGKELLGWFAKADIFVNPSVTENFCTTTNEALASGTPVVAVVAPSTAEQVISGVNGFLAAPNSPEDFAQKVITILEDPDLKNQLTAQARPSILEFDWSACTQKFENKLYELVNIPRQLDI
>NZ_CP011456.1|WP_053537776.1|526063_527533_+|signal-recognition-particle-docking-protein-FtsY
MAFNWFRRPNNESADTPETQNQEETPAVEATETETTGLDTADLLAFAKAAYKNIQEKQQIEPESPVAVEENTITEEIVETEAEEETAPIEIATNIAEITEDVVSELETANLSFLERAAAEREAKQEKLIASAIETEIPETPTTPIAAEVEIPELVFDDGFKWSAKVLAAQGRKAEDISLEEITWLKKLRQGLDKTRRNILNQLKAIVGQGPLNQAAVNEIESLLLQADVGVEATDYIIAALQKKILAEVTPPEQAIAYLKEILRGMLDAPLQNQDKPSFAPEKDQLTIWLITGVNGAGKTTTIGKISHLAQKSGYKCLIGAADTFRAAAVEQVKVWGNRSGVEVIANPGKNTDPAAVVFDAIAAAQSRETELLLIDTAGRLQNKKNLMDELSKIRKIIDKKAPNARVESLLVLDSTLGQNGLRQAEVFSQAAQLSGVVLTKLDGTGKGGVAIAVVQQLGLPIRFIGAGEGIEDLRPFSSYEFVEALLSG
>NZ_CP011456.1|WP_053537775.1|525296_525938_+|transcription-antitermination-protein-NusB
MQRRKPQQIARELALLSLSQLPINPKKLETLSDEQLVSKLVLGAVRTLTLEVQDTLNNAAGELQRSNDRLLTSETRAADLNTARTMLKEAISYTQIAINQLGTSVDFPELIQLANQDKEVRNYAKAIIITVSENHQAIEEYISHALVDWQVTRLAQIDRDILQIATAEIKFMKVPNSIAINEAVELAKRYSGEDGHRFINGVLRRVSEQKQPV
>NZ_CP011456.1|WP_053537785.1|544360_546091_+|SDR-family-NAD(P)-dependent-oxidoreductase
MTVTVQVSPSSVFVVSGGAKGITAQCTIKLAQHQRCKFILLGRSEITTEPEYVHDCVEDSALKKRIMENLISQGEKPTPMMVQKIFNQINSSREIKKTLAAIEATGGTAEYISVDVTDTVKLQAKLQEVSQKVGQITGIIHGAGNLADKLIEKKTEDDFEKVYTAKVQGLENLLNCVNPQQLQHLVLFSSVTGFYGNIGQSDYAIANEILSKSAHLMKQYNPNCHVVAINWGGWDSGMVTPQLKKAFAERGISIIPVEVGTQMLVNELHPAYQDHPQVVIGSPMKLPPAPLGLELRSYRIRRRMTLAENPFLHDHTIAGSPVLPATCAKSWMVNGCEEIYPGYTYFSCQDFKVLKGITFNSTLAKEHILEIQEVAKVDGDFVEFQTKILSKTPEGRTHYHFSSLIKLVKNMPEAPIYEAMDLREDNIVTDTAKDFYQNGDLSLFHGPAFQKITKVLNISSEKLTAECCWQEITAKEQGQFPVKWHNPYIIDLSTQTLWLWLNYIHKEVCLPGQLTYCEQYLAVPFNVPFYVSCEIIAKTDTGATVNFIIHDRQGKIYSKILGAKAVIWPMKMLNKK
>NZ_CP011456.1|WP_053541161.1|546307_547660_+|polyketide-synthase
MEKIAIIGLSCLFPDANNPEEFWQNLTAQKDSTSSITVADLGIDPAIFYDEKKGKPEKFYFQKGGFIRDFKFDANEYNLPSAFLESLDNTFKWSLYAAKQAIVQSGYLGNQTALAKCGVVLGTLGFPTKASNSLFAPIYQQNIQPAISELLQEKDFRLGGSSISKKVSPYNAMVSGLPAAIVSQAFSLSATHFCIDAACSSSFYAIKLASHYLQSGKTDLMLAGAISCADPLFVRMLFSGIQGYPDNGISRPLDKSSRGLITSEGTGMVMLKRHSDAVRDGDEILATICGNGLSNDGKGKHLLSPNPQGQTLAYQRAYSEAKLNPETIDYLECHATGTLLGDTTECNSIEGFFSPYKAAPLVGSTKTNVGHLLVAAGMVGITKTILSMSHGVIPPTIHVTQPIGSENNVISPQNIVRTPTKWPSQGIKRVALSAFGFGGTNSHIILEQGK
>NZ_CP011456.1|WP_053537786.1|547664_550979_+|type-I-polyketide-synthase
MNIQQHKTAKMAIVGMDAFFGECQELDAFENSIYDGKQHFVTLPESRWHGINEQETLLREYGLEAGKVPQGAYIDNFEVDTLAYKIPPNEVEKINSQQLLLLRVADRALKDAGLSPNSNVAVIIAADTELSVHQLQQRWNLPWQIKDGLNGAEIVLSPEKIHQLEGIVQDSIHNQVELSEYLSHVTNIMASRISSLWNFSGPSFTISAVETAAFKALELAQMLLDTNEVDAVVVGAVDLAGGVENVLLRSQFGKINTGVNTLSFDEKANGWNVGEGAGAVVLKRHDTALANNQRIYAVIDGISIGQSSSMAVDSHTITQVCQQAFQQADIEPTKVNYLEVCASGIPAEDEAEINGILQAYPSVGDGLHCAIGSVKANIGHTFVASGIASLIKTALSIYHRYIPGTPNWSGVKTPQVWEGSPFYVATESRPWFLQKEVKSRISAINSIGCDGSFAHIILSEETQQPERTSKYLESRPLHLLPIAADDQSSLLAALDHLQATIENADSLKNIASQTFVKFQQNSDSKYTLSLTGRNKKELIKEINSAKKGVTNAFANGKDWQTPIGSYFTPKPLGKDGEIAFVYPAAVNTYLGIGRSLFRLFPKVLDDVIIKSLDERAADVEKLVFPRSLSKLSTRQLEILEKKLLDDSLAMFEAEVLFTRLISTIITEDFQIKPKYIFGYSLGETSMMVAQGVWSNFYEVSHTFNSSALFGDRLSGPKNAVREYWGLPKTDIVPENKLWANYVLMASSAQVRECLKNETHVYLTQINTAEEVLIAGEPAACERVIKTLGCNSFPAPFDHVIHCQAMQSESQELEKLYTIPAQKIPGIKFYSAAEYQSIELDSQEIAHNITTGLCQQLDFPRLVNRVYGDGAKIFIEAGAGGICSRWIDKNLANQEHLTVSLNRRGTDDHSSLIKALAKLLSHQVKLNLAPLYNLFSENTQQKKAALRKVTLGGSSMTAAILNAENRQIFANNQKQTISTQPEYKIINSLQTSEKIAPTEIYPKPQPKLQKNTIKTIMENGLELSKKLKFFESTKILKPNINQESGEKISMNDLKKAQYQNLSNNTAKLTKTHTNFLAARQDFSQQMSEIIQLQLACAQNLLKEEK
>NZ_CP011456.1|WP_053537787.1|551164_552832_+|PfaD-family-polyunsaturated-fatty-acid/polyketide-biosynthesis-protein
MTTIETVLSKHDNGLGFFTCNHQNQIWKGSLDCVSFEKSAIKDKLLTSDKPCYIIKIAGKIGATNDGYLSSADNALSGQAELLISLPPLRLQQLGDPSFLAAYGVKYAYMTGAMAGGIASEEMVIALGKEKILSSFGAGGLLPERLETAINTIQEALPSGPYAFNLIHSPNEPAIERRAVDLYLKYGVRTVEASAFLDLTPNIVYYRVAGLRLNAANQIDIRNKVIAKVSRREVATKFLQPAPERILKELLQQGLITELQANLARQVPMADDITVEADSGGHTDNRPLVCLLPSIVALRDEIQGQYNYSVPIRIGVAGGIGTPEAALAGFMMGAAYIMTGSINQSCVESGACEHTKKLLAQAEMADMTMAPAADMFEMGVKLQVLKRGTMFPMRAQKLYELYRTYDSIEQIPSAEKEKLEKQIFRKSLAEVWEGAAAYLSQKNPEKLGKAVNNPKLKMAVIFRWYLGLSSRWSSTGEKGREVDYQIWCGPAMGGFNDWVRGSYLSEYNQRHVVDVADQIMRGTAFLYRSHSLKMQGLQMPTYYSQYQPIPSTLEK
>NZ_CP011456.1|WP_053537788.1|552834_554349_+|NAD-dependent-epimerase/dehydratase-family-protein
MSLKQSCTSESIQSFLVSHLAEVVGVETAEIDVDENLENYGLDSAQAMMIISKLEELLGFKPSPILLWHYPNIAALSQRLSEESSNGSQLQDAGSGTNSPVSFAPPLLDLAAEAVLDPTIQPIGTAVSVTNPKNIFLTGGTGYLGAFIIKELLEVSDATLYCLVRASNLEEGKSKLENNLQQYGIWQDHYSGRIIPIIGDLAQPHLGINGEQFQNLAANIDTIYHSAALLNYVYPYSALKTANVLGTQEVLRLACQTKVKPLHYVSSVAVFESSAYAGKLVKEDDDFHDWEGIFLGYSQTKWVAEKLVKIAGSRGLPITIHRPPLISGDSQTGICNTHDFINLMIKGCLQMGSFPDVDYMLDMSPVDYVSKSVVYLSRQETSVGKAFHLQHPQPASLKSLVDWVRSFGFSLKMIPYEEWQAELINNVTSQDNPLYTLRPFLLERWSDEQITIPDLYLQARRPIISCEATLEALKGSSIVCPPIDSQLLMTYTSYLVQTGFLSLA
>NZ_CP011456.1|WP_053537789.1|554544_555336_+|SDR-family-oxidoreductase
MNIKRQGTVLITGAANGIGYQLARIFAHNHYNLVLVDRLEEKITKIAVDFAEEFGISVKPIIKDLSISTSPEEIFTELQESGIKVDILVNNAGFGTYGLFNETNLKTELEMLQVNLVCLTHLTKLFLKEMVKQGHGKILNVASAAAFQPGPLMAVYFATKAYILSFSEAIANELEGTGVTVTVLCPGSTASAFHERTGMADSKMLKGKNMMDAETVAQMGYDALMRGKTIVIPGFMNKLMSKCVRFIPRKIVTKIVRSMQEDK
>NZ_CP011456.1|WP_053537790.1|555420_556011_+|Uma2-family-endonuclease
MQTQTRYYTPEEYLELEEQAEYKSEYRDGEIIAMTGGTTNHNKIALNFAASLKYGLRKKNYDVYIGDVRLWIPRYRQHTYPDVMIIQGEPIYATENTTTVMNPLLIAEVSSKSTSNYDQSDKFMYYRSIPEFKEYILINQYQYHVMQYVKTNDGKWIFTELESESDILTLQTIDFQIALSEIYEQVNFTQSNENQE
>NZ_CP011456.1|WP_053537791.1|556578_557799_+|geranylgeranyl-reductase
MTLRVAVVGSGPAGSCAAETLAKAGIETYLFERKLDNAKPCGGAIPLCMVSEFDLPPAIIDRRVRKMKMISPSNREVDINLINEEEYIGMCRREVLDGFLRDRAAKLGANLINATVHKVDIPGNNTDPYTIHYVDHTGDGAQGVTKTLKVDLIVGADGANSRVAKDMGAGDYNYAIAFQERIRLPQDKMDYYNDLAEMYVGDDVSTDFYAWVFPKHDHVAVGTGTMHINKARIKQFQTGIRARASEKLAGGEIIKIEAHPIPEHPRPRRVVGRIALVGDAAGYVTKSSGEGIYFAAKSGRMCAEAIVEAANGGARIPTERDLKVYIKRWDKKYGLTYKVLDILQNVFYRSDATREAFVEMCDDMDVQKLTFDSYLYKTVVPANPFTQLKITAKTIGSLIRGNALAP
>NZ_CP011456.1|WP_081424113.1|557923_559741_-|N-6-DNA-methylase
MTTTRKKTNNQKYSSQQSLDSYIYSICDIIRRSNCAGALQYIPELTWILFLRILDEQEQKEAENAEALDINFTPSLESPYRWRDWAATYDESLFKLDEKQRPQGWKRKQITDHTLEVEELDNFRKSGINLSEPFKVWVDLVLIPHLKQLKDHEKATPRQKVISQVLSGVERVRIDTQKNLLDVLDKVHEISNATVNINFIFPLSQVFEGLLLRMGEKGNDGGQFFTPRPIISVMVKVINPKIGETVYDPGLGTGGFLAQSYEHIRSQNGGQITSKDLEILKRKTFYGREKDNLIYPIAIANLVLHGIDEPHIWHGNTLTESETYGGLFTNAPDLHDVILMNPPFGGKESKEAQIGFDYQTSATQALFLQHAFKSLKSNGRCGIVLDEGILFRTNETAFVSTKRNLLENCNLWCIISLPAGTFVAAGGGVKANILFFTKGETTEKIWYYDLSDIKVGKRTPLTESHFDEFFRLLPTQGDSERSWTIDITERKAVAEEKSAPFKQKAAVIEEEIRELKDRLTALKKAKQQDSEIYTELEKTVKEQEKEARELKSQAEAIDNAVYDLKAVNPHVKTEEDNRTPAELLEFIEIKGKEINTILSSLRNKG
>NZ_CP011456.1|WP_053537792.1|559889_561134_-|hypothetical-protein
MKNSTYRLSLFQYVKFYYAIQHFWVKLGDVCESNTGTYNPEINPDNTFKYVDISGVDNISKCIIEVKILLGKDAPSRARKIIHTGDVIISTTRPNLNTVGLVPPELDKQICSTGFCVLRAKDELDQNYLFRFVQTGYFVNNLSSLVKGAMYPAVTDSQVREQLIPLPPLDEQKRIAGILNEKMEAVEKARESAIAQLEAAKELTSAYLRDLFNSPEAQKWEIKRLEEVCNDISDGTHFTPNYLDKGIPFLSVKDIREHGIYFDKCRFISKEQHQELCKRCKPEKGDVLYTKVGTTGIAKAIDTDRDFSIFVSVALLKLSCDIIPEYMEKILNAPICREQAENLTQGAANRNLVIRDIKSIKIPLPPLDEQKHIATTLTEKLTEVEQLCKTIKEQLETINKLPAAFLRQAFNGEL

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Crispr_ID: NZ_CP011456_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011456_3

793411-793562

Orphan

Consensus_repeat	Method
TAAAGAAATGTAAAATCGCCCAAACCCTCTTCACTCTTGCCTCTTGCCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP011456_3

>merge|NZ_CP011456|3|793411-793562|CRISPRCasFinder
TAAAGAAATGTAAAATCGCCCAAACCCTCTTCACTCTTGCCTCTTGCCTCTTGCCTTTTGCCTTTTGCCTTGCCATAACGACAATTTTCAACACCAACCTACTTAAAGAAAAGTAAAATCGCCCAAACCCTCTTCACTCTTGCCTCTTGCCT

>NZ_CP011456|3|3|793411-793562|CRISPRCasFinder
TAAAGAAATGTAAAATCGCCCAAACCCTCTTCACTCTTGCCTCTTGCCT	CTTGCCTTTTGCCTTTTGCCTTGCCATAACGACAATTTTCAACACCAACCTACT
TAAAGAAAAGTAAAATCGCCCAAACCCTCTTCACTCTTGCCTCTTGCCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011456.1\|WP_053537926.1\|786274_787822_-\|protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP011456.1\|WP_053537933.1\|800666_800990_-\|Grx4-family-monothiol-glutaredoxin	unknown	unknown	gnl\|CDD\|188046
NZ_CP011456.1\|WP_053537931.1\|793601_795092_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|129794
NZ_CP011456.1\|WP_053537928.1\|791280_791535_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053537922.1\|780644_780890_+\|membrane-protein-insertion-efficiency-factor-YidD	unknown	unknown	gnl\|CDD\|376620
NZ_CP011456.1\|WP_053537923.1\|781328_783119_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274008
NZ_CP011456.1\|WP_027403339.1\|789395_790157_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP011456.1\|WP_053537925.1\|785404_786124_+\|D-alanyl-D-alanine-dipeptidase	unknown	unknown	gnl\|CDD\|225084
NZ_CP011456.1\|WP_053537936.1\|804053_804515_+\|DUF29-domain-containing-protein	unknown	unknown	gnl\|CDD\|366774
NZ_CP011456.1\|WP_053537927.1\|788235_788979_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224058
NZ_CP011456.1\|WP_053537929.1\|792067_793264_+\|2-isopropylmalate-synthase	unknown	unknown	gnl\|CDD\|183341
NZ_CP011456.1\|WP_053537921.1\|779885_780578_-\|phosphatidate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|223248
NZ_CP011456.1\|WP_039199300.1\|801098_801329_-\|BolA-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223349
NZ_CP011456.1\|WP_053537938.1\|806926_807241_+\|DUF2605-domain-containing-protein	unknown	unknown	gnl\|CDD\|371248
NZ_CP011456.1\|WP_053537937.1\|804595_806416_-\|threonine--tRNA-ligase	unknown	unknown	gnl\|CDD\|237050
NZ_CP011456.1\|WP_053537924.1\|783131_784862_-\|HSP70-family-protein	unknown	unknown	gnl\|CDD\|212671
NZ_CP011456.1\|WP_053537934.1\|801406_801988_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053541172.1\|795477_796251_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053537935.1\|802164_803853_-\|NADH-quinone-oxidoreductase-subunit-M	unknown	unknown	gnl\|CDD\|237137
NZ_CP011456.1\|WP_053537932.1\|796288_800593_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|372468

Protein	Function_ID	Function_description	E-value
NZ_CP011456.1\|WP_053537926.1\|786274_787822_-\|protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	1.35066e-82
NZ_CP011456.1\|WP_053537933.1\|800666_800990_-\|Grx4-family-monothiol-glutaredoxin	gnl\|CDD\|188046	TIGR00365, TIGR00365, monothiol glutaredoxin, Grx4 family. The gene for the member of this glutaredoxin family in E. coli, originally designated ydhD, is now designated grxD. Its protein, Grx4, is a monothiol glutaredoxin similar to Grx5 of yeast, which is involved in iron-sulfur cluster formation. [Energy metabolism, Electron transport].	2.57528e-61
NZ_CP011456.1\|WP_053537931.1\|793601_795092_+\|MFS-transporter	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	3.43616e-62
NZ_CP011456.1\|WP_053537922.1\|780644_780890_+\|membrane-protein-insertion-efficiency-factor-YidD	gnl\|CDD\|376620	pfam01809, Haemolytic, Haemolytic domain. This domain has haemolytic activity. It is found in short (73-103 amino acid) proteins and contains three conserved cysteine residues.	5.42544e-42
NZ_CP011456.1\|WP_053537923.1\|781328_783119_-\|hypothetical-protein	gnl\|CDD\|274008	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins].	6.50923e-08
NZ_CP011456.1\|WP_027403339.1\|789395_790157_-\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	1.19075e-71
NZ_CP011456.1\|WP_053537925.1\|785404_786124_+\|D-alanyl-D-alanine-dipeptidase	gnl\|CDD\|225084	COG2173, DdpX, D-alanyl-D-alanine dipeptidase [Cell envelope biogenesis, outer membrane].	3.25859e-76
NZ_CP011456.1\|WP_053537936.1\|804053_804515_+\|DUF29-domain-containing-protein	gnl\|CDD\|366774	pfam01724, DUF29, Domain of unknown function DUF29. This family consists of various hypothetical proteins from cyanobacteria, none of which are functionally described. The aligned region is approximately 120-140 amino acids long corresponding to almost the entire length of the proteins in the family. Structure 3fcn is a small protein that has a novel all-alpha fold. The N-terminal helical hairpin is likely to function as a dimerization module. This protein is a member of PFam family PF01724. The function of this protein is unknown. One protein sequence contains a fusion of this protein and a DnaB domain, suggesting a possible role in DNA helicase activity (hypothetical). Dali hits have low Z and high rmsd, suggesting probably only topological similarities (not functional relevance) (details derived from TOPSAN). The family has several highly conserved sequence motifs, including YD/ExD, DxxNVxEEIE, and CPY/F/W, as well as conserved tryptophans.	9.87013e-43
NZ_CP011456.1\|WP_053537927.1\|788235_788979_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224058	COG1135, AbcC, ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism].	1.48485e-74
NZ_CP011456.1\|WP_053537929.1\|792067_793264_+\|2-isopropylmalate-synthase	gnl\|CDD\|183341	PRK11858, aksA, trans-homoaconitate synthase; Reviewed.	6.06904e-112
NZ_CP011456.1\|WP_053537921.1\|779885_780578_-\|phosphatidate-cytidylyltransferase	gnl\|CDD\|223248	COG0170, SEC59, Dolichol kinase [Lipid metabolism].	6.18413e-25
NZ_CP011456.1\|WP_039199300.1\|801098_801329_-\|BolA-family-transcriptional-regulator	gnl\|CDD\|223349	COG0271, BolA, Stress-induced morphogen (activity unknown) [Signal transduction mechanisms].	6.20434e-24
NZ_CP011456.1\|WP_053537937.1\|804595_806416_-\|threonine--tRNA-ligase	gnl\|CDD\|237050	PRK12305, thrS, threonyl-tRNA synthetase; Reviewed.	0
NZ_CP011456.1\|WP_053537924.1\|783131_784862_-\|HSP70-family-protein	gnl\|CDD\|212671	cd10229, HSPA12_like_NBD, Nucleotide-binding domain of HSPA12A, HSPA12B and similar proteins. Human HSPA12A (also known as 70-kDa heat shock protein-12A) and HSPA12B (also known as 70-kDa heat shock protein-12B, chromosome 20 open reading frame 60/C20orf60, dJ1009E24.2) belong to the heat shock protein 70 (HSP70) family of chaperones that assist in protein folding and assembly, and can direct incompetent "client" proteins towards degradation. Typically, HSP70s have a nucleotide-binding domain (NBD) and a substrate-binding domain (SBD). The nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. HSP70 chaperone activity is regulated by various co-chaperones: J-domain proteins and nucleotide exchange factors (NEFs). No co-chaperones have yet been identified for HSPA12A or HSPA12B. The gene encoding HSPA12A maps to 10q26.12, a cytogenetic region that might represent a common susceptibility locus for both schizophrenia and bipolar affective disorder; reduced expression of HSPA12A has been shown in the prefrontal cortex of subjects with schizophrenia. HSPA12A is also a candidate gene for forelimb-girdle muscular anomaly, an autosomal recessive disorder of Japanese black cattle. HSPA12A is predominantly expressed in neuronal cells. It may also play a role in the atherosclerotic process. The gene encoding HSPA12B maps to 20p13. HSPA12B is predominantly expressed in endothelial cells, is required for angiogenesis, and may interact with known angiogenesis mediators. It may be important for host defense in microglia-mediated immune response. HSPA12B expression is up-regulated in lipopolysaccharide (LPS)-induced inflammatory response in the spinal cord, and mostly located in active microglia; this induced expression may be regulated by activation of MAPK-p38, ERK1/2 and SAPK/JNK signaling pathways. Overexpression of HSPA12B also protects against LPS-induced cardiac dysfunction and involves the preserved activation of the PI3K/Akt signaling pathway.	8.02259e-127
NZ_CP011456.1\|WP_053537938.1\|806926_807241_+\|DUF2605-domain-containing-protein	gnl\|CDD\|371248	pfam10792, DUF2605, Protein of unknown function (DUF2605). This family is conserved in Cyanobacteria. The function is not known.	1.91089e-50
NZ_CP011456.1\|WP_053537935.1\|802164_803853_-\|NADH-quinone-oxidoreductase-subunit-M	gnl\|CDD\|237137	PRK12561, PRK12561, NAD(P)H-quinone oxidoreductase subunit 4; Provisional.	0
NZ_CP011456.1\|WP_053537932.1\|796288_800593_-\|AAA-family-ATPase	gnl\|CDD\|372468	pfam13087, AAA_12, AAA domain. This family of domains contain a P-loop motif that is characteristic of the AAA superfamily. Many of the proteins in this family are conjugative transfer proteins.	1.51126e-60

>NZ_CP011456.1|WP_053537929.1|792067_793264_+|2-isopropylmalate-synthase
MLQILDSTLREGEQTPGVYFSPDKKMIIAQFLDQIGVDIIEVGNPAVDREIALAITRISQAGLKAKIGAHSLCKIDHVQKALDCGIDFLGIFFSVSKKRLEQDYNIDLDVAIEKIIEVVTFAKEQKHDLLIRYTAEDTVRSPIENVIAAASAAVKAGVNIISIADTTGYSTPFHPQRSMYFYVKTLKEELGNRGLYPQIEVHCHNDKGLALANALDAYRGGADIIDVATMGLGERAGIVDLAELLINLIDMGEKEKKWQLNYLEELYKFVSQHSHIPIPPHQAITGKNAFTHYAGVHVKAVAKNEELYQSLNPQLLGKQSSFALGMQSGYTAVQMALKQIGQGELAENKDLVDKILQEIKVIAKRGTPIDIEAELPKIIEQFSVATHPFGNDICNLSV
>NZ_CP011456.1|WP_053537928.1|791280_791535_+|hypothetical-protein
MLQDTQTIRYYQRLTDAFVELWNRGYRMDDMRMYLDGYLAALRHSNIMEPYWIHRLEEEASRYLYDVSNFAMVQPEPEKQHGYY
>NZ_CP011456.1|WP_027403339.1|789395_790157_-|response-regulator-transcription-factor
MGSVCIEIVEGNPHLRSLLGWHLQQLEYRVHQAASIYQAKEVFISHQPTLVILDADLSDGDGVEFCRWLHRQQQPLILMLSARTNEADIVTGLKAGADDYLSKPFGMQEFLARVEAIIRRNRTPTAPAYLDYGSLQIDLVQRRVRFQGEFIDLTPQEFSLLYVLAQAGGVPLSRSELLRRAWPDAIDNPRTIDTHVLSLRKKVELDPRQPSLIQTIRNVGYRFNMEILNVNVPQTQTKLPRERFTNQIPVLTK
>NZ_CP011456.1|WP_053537927.1|788235_788979_+|ATP-binding-cassette-domain-containing-protein
MLRLESVNFYRRLQHQHQYPILQDISFRVSPGDRLAIVGTSGAGKTSLLRLINRLNEPTSGKIYLQDQEYRQIPVIQLRQQVMLVQQESKLLGMTVGEALAYPLVLRGLPKQKIQEQVSYWQEQLQIPEQWLGRTEVQLAAGQRQLIAIARALVTEPQILLLDEPTSALDTPTSTHLINILTHLNQPRSSAILMVNRQIDLAQAFCTHLLHLQQGQLVVNQPAAEIDWSNLATSLIQAETQTLAEWT
>NZ_CP011456.1|WP_053537926.1|786274_787822_-|protein-kinase
MLAGTILQNGKYTILQEIGRGGFGVTFKAMHHYLNQEVVMKTINERLRQHPDFPKFQRQFQDEARRLAACVHPHIVRVSDFFEEDSLPYMVMEYIRGDTLGAAFILPGIPLPEATAIHYIRQIGAALQVVHDNGLLHRDIKPDNIILRQGTQEVVLIDFGIAREFNNGAKQTHTGLVSEGYAPIEQYLTQAQRTAATDVYGLAATLYALLTAQVPIPALLRDREQMPSPRELQPHLSAAVNQAVSRGMAVEPQFRPTTVAEWLQLLPGNRLAVTSPSLPTQAIPTINLSDLKSEYSPKKATFHPLSTPSKIANIGKKTGIPKGVISISIALVAATAGFSMTQILSKPNLQSSPKPSFAQSTYQPIPPKPVVEISPSSANQKLQNSSFNQSVPLPRVRRKRKNIRVSPEPVPTSNSQETTAENQNSQPTPNSDNTTKKSTPVVTSSPSLMDTLRDSKESQKASPPPENTAPEPPPVVTPPQESQPENSSGVVVPTVETKQNPAPEIQQRKEEKPQL
>NZ_CP011456.1|WP_053537925.1|785404_786124_+|D-alanyl-D-alanine-dipeptidase
MRPYYQIPIIECGEPLVKIPLELFAVESPHPYQKLGANYGGHSPYYLRQSVVENLIQAQNNLQLLCPNWYIQIFDAYRPVAVQQFMVDYSFGEALRERGLTEKELSPQQREDVWKLVYEIWAVPSLDMKTPPPHSTGAAVDITLVNDLGEVVDMGSPIDEMSDRSHPEYYTHSHQEYDANRQLLRDIMLKAGFQRNPREWWHFSFGDQMWAWLYNQSHPETVMTARYGRLNSDTSRNFP
>NZ_CP011456.1|WP_053537924.1|783131_784862_-|HSP70-family-protein
MVLDSKKIKVVAAIDFGTSRSGYAYAFKDDKRVIGRYEWDKQPFPYIKTLTQSLYNSDRKLETWGYAALSRLAELRQAKNAKDYSFFPTFKMALRESCKRTDKGPIATANNGQEFPVINLVADYLHQLGGLLRKELDNATSGELKDHEILWCLTIPAIWKDEEKSFMRRAAIKAGLITGSDDDRERLLLVLEPEAAAIYCQEKDQAELEAGKRFMVIDCGGGTVDITVHEVSPHGGLDEVAEGSGGAYGSTCVDKEFREYLVTKLTAQALMRYEEEDPIGWLELMANWERKKCDFDPTTTATTYFEIPNRLYKILSKEHPQVLEQLADEQEGDDEKVHVSKETMQGFFEPILDGLVRKVKEQFARLDDRGCDILYVVGGFSTSPVLRQRIQKEFGSRIKVVMPSDPGAAIVQGAASFGVNPESIRSRRSHLTYGCQSCQPFDKNHDRNQKSNRQYLEDQGGWHIFNRFRSFVLAGESIGVNEVVTHSFNPVTADQTVINFKFYATRKQNPRYVDESEIEELGELDVDISSTVGTRDRPVEVSMNFGKTEIAVTAIDIKTGKTYNTALRFSSTYSIE
>NZ_CP011456.1|WP_053537923.1|781328_783119_-|hypothetical-protein
MMEFQETNNSQPETKEQVEQFPKEKKIELIDQAKNTLKSMLSMSRTNEKIYNKLLLVYNWLCAIYDGQPDTQFEYSEIKVAYENIQPALNLINRLLDDKEKLRQQLTEKEQDNESLNRENRKLEKICQDWDRDDESLNKELARITAERNNFSPLIGRYQGQIETLQKELNNTISNYHQQIDRKNEEIETLKKENQTIVQNLAELEASKGRLLTQLASVKQNTVTHYDGTSDRPQHHVLTGEYKTLKEQYLDPLANSLFTLMATSNPELKQQRREKVNDIKADISAIVLIGGQAIMRGENTISIELLSGMLNEMLNLFSQKLGIFDIQSQLSQVSELLTKAANLAQGKVQYPVPGKWQEDDFKQTIRELSDHLCQKLHLNFTSLNQDIQTEIQQSINNALIFLQRANLADPPAFLSLESKGAPFRFNYHEAAKGYDDEGKIIKAIYPVYLVNSEAKVKAIVLTETTITTTTTGQRNPDPAHNSIRYETLSPTEPPSNPPASATKLSEISEDEKEKMIAQGMLQGKPETLIKNVKTRWIDNADYSYYGGDKDSDNELLEKLANITNIEVIEQLEDELIIIKYFGSCGNFMVETQITKI
>NZ_CP011456.1|WP_053537922.1|780644_780890_+|membrane-protein-insertion-efficiency-factor-YidD
MEILLIWLIKGYRLFISPLFPPTCRFQPTCSMYAIQAIERFGVFRGGWMAIMRILRCHPFHPGGYDPVPDAKAKSCCEHEE
>NZ_CP011456.1|WP_053537921.1|779885_780578_-|phosphatidate-cytidylyltransferase
MSLETLSPLSLPIATAAAWVGLIICIAWVVSRFTDSEPEIIRKIVHIGTGNVILIAWWLDIPAYVGITAAVFASIITLLSYQFPILPGINSVGRQSLGTFFYAVSIGVLVGVFWHLHQPQYAVLGIMTMAWGDGLAALIGKRFGKHKYIVFGSQKSWEGSLTVTLISYFICVTILLVTQGSIWQTWIVSLIIASIATILEAFSFLGIDNLTVPIGSATCAYLLNQLLSGY
>NZ_CP011456.1|WP_053537931.1|793601_795092_+|MFS-transporter
MLKTQEPEFNCLKTEIKPSAKWWTILSVSIGVFIFSLDVYIVNLALPIMLESLHTTFANSQWVVLSYLLAISIFVLSASKLGDIWSKKKLYIIGMIVFTISSLLCGLAPNIGFLIAFRAIQGVGAAFISGLGTAMIVEAFPVEERGLGLGIRAGVFGLGMMLGPTIGGLLVSIGDWPLIFFINVPIGIIGILIMAYFVPPSIVNGEKQQFDIIGTIVITFILTCFILAITLLEEQNHDLNIILALLFLSMISLAFLIFIEMRTVTPILDWKIFRSLDLSLGLGLRFIGNFVIAGSIFILPFFFKLVKQYPTNKAGFLLAIPPIIIVLTAPMAGTLSDKFGSRIISITGLLLMAIGCFLISTFNAELTIINYIIAIIPYGLGIGMFQSPNNSAIMGAAPQDSLGIASGLLSLSRILGQTISVPLVGAIFSFVTLNNTQLNTNINITNAPVASLVLGTQITFRFITILLVISTIFAIYLWWIKQKRVSMEKLISDISR
>NZ_CP011456.1|WP_053541172.1|795477_796251_-|hypothetical-protein
METENSGLLVLAARLFGYTVTQNFLELTIKESRKFNVLEEFIIRAGMEFNPPPTANDLASILGLDSVFVKSTIANLQSLQTLADTSQITVTAEGSLFYAQGSVPKPPYSMQIYAITDNLAGKIIFQYESLEDVVIKQPDLAEFVNIEVKITPISRLQLADIQDIIQSCHLPLHVPTEGKFVTDFKVKGSTQTIGRNISLFVVFDENLNKLNIEIRSGQEILEAATKKIEELYNDKKISLEELCQLSEETIHLKSNPD
>NZ_CP011456.1|WP_053537932.1|796288_800593_-|AAA-family-ATPase
MNNKTKIEDCGYTFIGSAVDNLVRHFEGQSSLQLYPDFRERRERANELLFDLVGKQPGLFYIRRQGTGKESGEEIWELTIATDQDNFQLPKKLKQLGKTLAFKAAIRQDGHGGFKILSAYLLHELRGNIDGYALPYWLRLSPNHQHHLDIPKPLLAKIKNMPICGNHVPTEDQLKAWKAFLKVEERIAKSRQFCVSFLIANNSSNSRQIALEIKVNSATLNGSEENILGVENFWERVKKAKNQEVNFLDSVPTDKNRRHSRQLGTIEKIDQKHNLIHIRLERELIEYIAKGNYQLPNKGYLFFDAAGDIKQIERKEKALEQLRQGRTQNPYLGNFLFDASQARPIIKRIKLNSKDLLLSSANAGQKAAVEKVLSAEDLVLIQGPPGTGKTTVIAEICYQVALRGGRTLITSQANLAVDNALSRLVHNPVIRAIRKGRAEKVGEEGQPFLEDQVIGTWLQNTATDCENNLSQRHENIKILNQLLLLLPRFTDYFLAEAEINQQQNELKTEKQNLEAAYQNQQLEYHQTLVKKKEIEYLITGLENILKNSTNIDWESSEINNFLPQTKPYTENNQQVEDFRENVRQAIKCIEELGFVRPGFGAFGLAVWLQENITTHLSGFKPGLKNANDVGLAISEVAKLVYIFQQHSLSLEKLETDYQKFNNQNDLQPTIQIWENRKREIDYIIEAVVEWKSTANNNLYQVLKECQQSNLVLTENMVDLPLGLLMFAKTLKLTIVPKNYQISLPDWGVLTKAIAYEIEGNFIDRKGKKHDFSYFLQQSFSQIPIVLSKPDQIQWQTTYQKLQNYQLLNPKQRKLLVENTQVFLIRLEKTYSNSFEWNNVEATLTRITQELLDIILVHARQCVLRVKTEAEQQLQILNQQFQELPQNAISSEQISEAKSQVRKSKEAANLNLAEVIHNLQLLHKQQNIPAPLRIIAEKYLTRQANIWEQPQEFSQQVKFWENRVNEMETLISSLAPFTILATIKDSLNQEFINLQAEADIYQQEIAELQIKIADLEQKLQLQLSASLISERNWWQSIWQTIPDKLKPELSNDNLFDSDSLCSIQNKFKSWKRQLKSEENYLQKYQNFVQDWVAKLRKPSEQDSKDLRGIYLDNANVVGITCVQAANYNFSEEFQSFDVVIIDEVSKCTPPELLIPALKGKKLVMVGDHRQLPPMLDTSTVEEVAKTMGNTREELQFLEESLFKSQFETADKSIKKMLNTQYRMHPMIMGAINQFYHGKLECGILEPDTKRAHNLAGEIIQPDNHLCWVKMPRENEFQEERSGTSFLNTKEIDVIESICHQFEKVWVNKVANGEPRKEIAVITFYGAQLRKIDERLQSEFFPSLQIRTGTVDRFQGMERPVVIVSMVRNNHQGDVGFANKPERVNVAFSRAQELLVIVGCHDLFTAKPGTVGNMYSEVANTVNYHGGFIDVSCFCS
>NZ_CP011456.1|WP_053537933.1|800666_800990_-|Grx4-family-monothiol-glutaredoxin
MTPELKERIDTLVEENKIMVFMKGNKLMPQCGFSNNVVQILNTLGVPFETIDVLADQEIRQGIKEYSNWPTIPQVYINGKFVGGSDILIEMYNKGELQEVVEVALAS
>NZ_CP011456.1|WP_039199300.1|801098_801329_-|BolA-family-transcriptional-regulator
MISPQQVEAMIKAEMPDAQVQVQDLTGGGDHYQVTVVSSQFAGKGLVQQHQLVYSALQEAMSTEAIHALALKTSTP
>NZ_CP011456.1|WP_053537934.1|801406_801988_-|hypothetical-protein
MNAATLIRLTSLSLIVSLGLLSPTYAEGKKVSNPISQAKPKPIDTDKPNTLTPTGTSNNLLSIEGGDRLMKESTEAVSSQNYALAAKKLQEARQVYNQLSSFYQDLNSSFAGIDIRAADAYRKNALTTAQKRDEATYQLALVHRAQNQPELAIPLLVQIIKSQNPTRELGTKAYQQLFELGFVDVPFPRQGKK
>NZ_CP011456.1|WP_053537935.1|802164_803853_-|NADH-quinone-oxidoreductase-subunit-M
MIADHFPWLTAIVLFPLVASLFIPVLPDKDGKLVRWYALGIGIADFIFMCYAFWQHYDASNANFQLVENYVWMPQLGLNWAVSVDGISAPLVLLAGFVTTLAMFSAWQVDRRPKLFYFLMLVLYSAQVGVFVAQDLLLFFIMWEVELIPVYLLVCIWGGQRRRYAATKFLLYTAAASIFILVAALAMGLYGGGNVTFDIAELAQKEYPLTLQLLLYAGLLIAFGVKLAIFPLHTWLPDAHGEASSPVSMILAGVLLKMGGYGLIRLNLDLLADAHVYFAPVLAILGVVNIIYGALNSFAQTNMKRRLAYSSISHMGFVLIGIASFTDLGINGAMLQMISHGLIASVLFFLAGVTYDRSHTMMMAEMGGIGQAMPKVFALFTMGAMASLALPGMSGFVGELSVFVGIATSDVYTSTFCTVTVFLAAVGVILTPIYLLSMLREVFYGSSAALICDINNADLENQEDEGTACFGTDCLLPTETVYSDARPREVFIAACFLVLIIGIGFYPKVAMQMYDAKTVAVNAHVRQSYTIISQTNPHIYASGFLNPQIPATELTPVLGTLK
>NZ_CP011456.1|WP_053537936.1|804053_804515_+|DUF29-domain-containing-protein
MTEIQLAKTGLDNRDQYLWLEETILKLKARDFHGLDVEHLIEEMEILASRDRAEVESRLIVLWVHLLKRIYVNSEYDNRGWEVTIREQRRQLRILLKQSPSLKRYFTAVLDQAWEEALMEVREDYPSFQFPDVWDFSLNVDALLSEKFWDFVG
>NZ_CP011456.1|WP_053537937.1|804595_806416_-|threonine--tRNA-ligase
MSPNQETQAVEKIYLPRTSESETLKKIRHTASHIMAMAVQKLFPKAQVTIGPWIENGFYYDFDSPEPFSDKDLKTIQKEMVKIINRKLPLIREEVSREEAQHRIEAIKEPYKLEILADIKQEPITIYHLGDQWWDLCAGPHLENTSEINPKAIELESVAGAYWRGDEKKAQLQRIYATAWETPEQLAEYKRRKEEALRRDHRKLGKELGLFIFSDLVGPGLPLWTPKGTLLRTILEDFLKKEQLKRGYLPVVTPHIARVDLFKTSGHWQKYKEDMFPLMAEDEEARAIEQGFVMKPMNCPFHIQIYKSELRSYRELPMRLAEFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPEQLDSEFLNVVDLILSVFKSLQLKNFKARLSFRDPASDKYIGGDEVWDKAEGAIRRAVQQLGMEHFEGIGEAAFYGPKLDFIFSDALEREWQLGTVQVDYNLPERFDLEYVAEDGSRKRPVMIHRAPFGSLERLIGILIEEYAGDFPLWLAPVQIRLLPVGDLQLDFTKEVAAKMVALGIRAEVDLSGDRLGKLIRNAEKDKIPVMAVVGAKEVEANSLSIRTRASGELGVITVDEVVNKITEAITNFSNF
>NZ_CP011456.1|WP_053537938.1|806926_807241_+|DUF2605-domain-containing-protein
MRDSNLPSADLLKSVLEPLLEDFQYWFERYSQILENEKIQFMSEQEQLNLLKRVKDAECELNTVRMLFTATEKQVGIDMATVMPWHQLVTECWSVGMRLGQSKE

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Crispr_ID: NZ_CP011456_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011456_4

816128-816237

Orphan

Consensus_repeat	Method
GGGGGAGAAGAGAGGTAGGGGGGG	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP011456_4

>merge|NZ_CP011456|4|816128-816237|CRISPRCasFinder
ACGGGGGGAGAGAGGTGGGGGGGGGAGAAGAGAGGTAGGGGGGGGAGGGGGAGAAGAGAGGTAGGGGGGGAGGGGGAGAAGAGAGGTGGGGGGGAGAGAGGTGGGGGGGG

>NZ_CP011456|4|4|816128-816237|CRISPRCasFinder
ACGGGGGGAGAGAGGTGGGGGGGG	GAGAAGAGAGGTAGGGGGGGGA
GGGGGAGAAGAGAGGTAGGGGGGG	AGGGGGAGAAGAGAGG
TGGGGGGGAGAGAGGTGGGGGGGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011456.1\|WP_027403354.1\|808851_809112_+\|photosystem-I-reaction-center-subunit-PsaK	unknown	unknown	gnl\|CDD\|183899
NZ_CP011456.1\|WP_027403358.1\|812517_813258_+\|cytochrome-C-biogenesis-protein-CcdA	unknown	unknown	gnl\|CDD\|280792
NZ_CP011456.1\|WP_053537943.1\|816831_817929_-\|glycosyl-transferase	unknown	unknown	gnl\|CDD\|273203
NZ_CP011456.1\|WP_027403357.1\|811757_812165_-\|NUDIX-hydrolase	unknown	unknown	gnl\|CDD\|240024
NZ_CP011456.1\|WP_053537941.1\|813261_814650_+\|cytochrome-c-biogenesis-protein	unknown	unknown	gnl\|CDD\|214387
NZ_CP011456.1\|WP_053537946.1\|820843_821767_-\|Rpn-family-recombination-promoting-nuclease/putative-transposase	unknown	unknown	gnl\|CDD\|371375
NZ_CP011456.1\|WP_053537951.1\|826714_828064_+\|3-phosphoshikimate-1-carboxyvinyltransferase	unknown	unknown	gnl\|CDD\|235037
NZ_CP011456.1\|WP_053537947.1\|821904_822930_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223674
NZ_CP011456.1\|WP_027403361.1\|816289_816703_-\|YjbQ-family-protein	unknown	unknown	gnl\|CDD\|223509
NZ_CP011456.1\|WP_053537944.1\|818181_819333_-\|aminotransferase-class-V-fold-PLP-dependent-enzyme	unknown	unknown	gnl\|CDD\|223594
NZ_CP011456.1\|WP_027403352.1\|807488_807809_+\|DUF2973-domain-containing-protein	unknown	unknown	gnl\|CDD\|371413
NZ_CP011456.1\|WP_053537948.1\|823109_824741_-\|peptide-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|173884
NZ_CP011456.1\|WP_053537949.1\|824966_825542_+\|thioredoxin-family-protein	unknown	unknown	gnl\|CDD\|239267
NZ_CP011456.1\|WP_027403360.1\|814699_815344_-\|ATP-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|234971
NZ_CP011456.1\|WP_053537945.1\|819418_820534_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224094
NZ_CP011456.1\|WP_053537939.1\|809843_811187_+\|FHA-domain-containing-protein	unknown	unknown	gnl\|CDD\|270916
NZ_CP011456.1\|WP_053537950.1\|825862_826375_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053537940.1\|811206_811701_+\|ureidoglycolate-hydrolase	unknown	unknown	gnl\|CDD\|377223
NZ_CP011456.1\|WP_053537938.1\|806926_807241_+\|DUF2605-domain-containing-protein	unknown	unknown	gnl\|CDD\|371248
NZ_CP011456.1\|WP_027403353.1\|808187_808622_-\|SufE-family-protein	unknown	unknown	gnl\|CDD\|376883

Protein	Function_ID	Function_description	E-value
NZ_CP011456.1\|WP_027403354.1\|808851_809112_+\|photosystem-I-reaction-center-subunit-PsaK	gnl\|CDD\|183899	PRK13214, PRK13214, photosystem I reaction center subunit X; Reviewed.	1.11419e-34
NZ_CP011456.1\|WP_027403358.1\|812517_813258_+\|cytochrome-C-biogenesis-protein-CcdA	gnl\|CDD\|280792	pfam02683, DsbD, Cytochrome C biogenesis protein transmembrane region. This family consists of the transmembrane (i.e. non-catalytic) region of Cytochrome C biogenesis proteins also known as disulphide interchange proteins. These proteins posses a protein disulphide isomerase like domain that is not found within the aligned region of this family.	2.44885e-46
NZ_CP011456.1\|WP_053537943.1\|816831_817929_-\|glycosyl-transferase	gnl\|CDD\|273203	TIGR00661, conserved_hypothetical_protein, conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases. [Hypothetical proteins, Conserved].	0.000515521
NZ_CP011456.1\|WP_027403357.1\|811757_812165_-\|NUDIX-hydrolase	gnl\|CDD\|240024	cd04666, Nudix_Hydrolase_9, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which functions as a metal binding and catalytic site. Substrates of nudix hydrolases include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance & "house-cleaning" enzymes. Substrate specificity is used to define families within the superfamily. Differences in substrate specificity are determined by the N-terminal extension or by residues in variable loop regions. Mechanistically, substrate hydrolysis occurs by a nucleophilic substitution reaction, with variation in the numbers and roles of divalent cations required.	7.70541e-48
NZ_CP011456.1\|WP_053537941.1\|813261_814650_+\|cytochrome-c-biogenesis-protein	gnl\|CDD\|214387	CHL00177, ccs1, c-type cytochrome biogenensis protein; Validated.	2.24517e-170
NZ_CP011456.1\|WP_053537946.1\|820843_821767_-\|Rpn-family-recombination-promoting-nuclease/putative-transposase	gnl\|CDD\|371375	pfam11103, DUF2887, Protein of unknown function (DUF2887). This bacterial family of proteins has no known function. These proteins may be distantly related to the PD(D/E)XK superfamily.	2.46133e-113
NZ_CP011456.1\|WP_053537951.1\|826714_828064_+\|3-phosphoshikimate-1-carboxyvinyltransferase	gnl\|CDD\|235037	PRK02427, PRK02427, 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional.	0
NZ_CP011456.1\|WP_053537947.1\|821904_822930_-\|ABC-transporter-permease	gnl\|CDD\|223674	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	8.55628e-114
NZ_CP011456.1\|WP_027403361.1\|816289_816703_-\|YjbQ-family-protein	gnl\|CDD\|223509	COG0432, COG0432, Uncharacterized conserved protein [Function unknown].	2.58777e-59
NZ_CP011456.1\|WP_053537944.1\|818181_819333_-\|aminotransferase-class-V-fold-PLP-dependent-enzyme	gnl\|CDD\|223594	COG0520, csdA, Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones].	8.51985e-107
NZ_CP011456.1\|WP_027403352.1\|807488_807809_+\|DUF2973-domain-containing-protein	gnl\|CDD\|371413	pfam11189, DUF2973, Protein of unknown function (DUF2973). Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently they have no known function.	2.71315e-35
NZ_CP011456.1\|WP_053537948.1\|823109_824741_-\|peptide-ABC-transporter-substrate-binding-protein	gnl\|CDD\|173884	cd08519, PBP2_NikA_DppA_OppA_like_20, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold. This CD represents the substrate-binding domain of an uncharacterized ATP-binding cassette (ABC) type nickel/dipeptide/oligopeptide-like transporter. The oligopeptide-binding protein OppA and the dipeptide-binding protein DppA show significant sequence similarity to NikA, the initial nickel receptor. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	0
NZ_CP011456.1\|WP_053537949.1\|824966_825542_+\|thioredoxin-family-protein	gnl\|CDD\|239267	cd02969, PRX_like1, Peroxiredoxin (PRX)-like 1 family; hypothetical proteins that show sequence similarity to PRXs. Members of this group contain a conserved cysteine that aligns to the first cysteine in the CXXC motif of TRX. This does not correspond to the peroxidatic cysteine found in PRXs, which aligns to the second cysteine in the CXXC motif of TRX. In addition, these proteins do not contain the other two conserved residues of the catalytic triad of PRX. PRXs confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF.	1.54859e-87
NZ_CP011456.1\|WP_027403360.1\|814699_815344_-\|ATP-phosphoribosyltransferase	gnl\|CDD\|234971	PRK01686, hisG, ATP phosphoribosyltransferase catalytic subunit; Reviewed.	5.3366e-116
NZ_CP011456.1\|WP_053537945.1\|819418_820534_+\|ABC-transporter-permease	gnl\|CDD\|224094	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	5.21361e-84
NZ_CP011456.1\|WP_053537939.1\|809843_811187_+\|FHA-domain-containing-protein	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	7.00131e-70
NZ_CP011456.1\|WP_053537940.1\|811206_811701_+\|ureidoglycolate-hydrolase	gnl\|CDD\|377223	pfam04115, Ureidogly_lyase, Ureidoglycolate lyase. Ureidoglycolate lyase (EC:4.3.2.3) is one of the enzymes that acts upon ureidoglycolate, an intermediate of purine catabolism, releasing urea. The enzyme has in the past been wrongly assigned to EC:3.5.3.19, enzymes which release ammonia from ureidoglycolate.	2.26566e-06
NZ_CP011456.1\|WP_053537938.1\|806926_807241_+\|DUF2605-domain-containing-protein	gnl\|CDD\|371248	pfam10792, DUF2605, Protein of unknown function (DUF2605). This family is conserved in Cyanobacteria. The function is not known.	1.91089e-50
NZ_CP011456.1\|WP_027403353.1\|808187_808622_-\|SufE-family-protein	gnl\|CDD\|376883	pfam02657, SufE, Fe-S metabolism associated domain. This family consists of the SufE-related proteins. These have been implicated in Fe-S metabolism and export).	4.07823e-59

>NZ_CP011456.1|WP_027403360.1|814699_815344_-|ATP-phosphoribosyltransferase
MLTVAIPKGELLKPSLRILQSVGLDFSAFLESGNRQLQIPDASGQAKALLVRAQDVPVYVEYGQAQLGIVGYDVLREKQPQVAQLVDLKFGYCRMSVAVKATSSYKSPLDLPAHGRVASKYVNCAREYFQGLDLPIEIVPLYGSVELGPITGMSEAIVDIVSTGKTLKENGLIEIATLYESTARLIVHPLSYRLNTGNLDQLIEQMRLGLLTAV
>NZ_CP011456.1|WP_053537941.1|813261_814650_+|cytochrome-c-biogenesis-protein
MTSDQTTSTELSWWLIPGRFIRRQILPVLTDLRLAIILLLVIALFSVSGTVIEQGQLPDFYQSNYPEHPALFGFLSWKVIQVVGLDHVYRTWWFLSLLVLFGTSLTACTFTRQLPALKAAQKWKYYEEPRNFTKLALSAELEGVCLSSIPSILQQKSYRIFQGTNQKKDDILYARKGIVGRIGPIIVHIGIVAILLGGIWGAMTGFMAQEMITSGDTFQVKNIVDAGAWSSKDVLKDWSVRVNRFWIDYTPTGGIDQFYSDMSVLNNDGQEVNHEKIYVNKPLRYHGVVFYQTDWGISNVRVRLNKSPIFQLPMVQLDTKGRGRIWGTWIPTKPDLSEGVSLLAKDLQGMVLIYDAQGKLINTVRAGMSTPVNGVNLQILDIMGSTGLQIKFDPGIPIVYTGFGLLMLGVVMSYFSHSQIWALQKGETLYIGGKTNRAQVAFEQEVLAILDQLSAVNNVKKS
>NZ_CP011456.1|WP_027403358.1|812517_813258_+|cytochrome-C-biogenesis-protein-CcdA
MLETLETRIYELEQFANTLVANQLTHLSFVSIGIIFLAGLLTSLTPCMLSMLPITIGYIGGYEAKSRLQAAAQSTWFALGLATTLAGMGILAGLVGKVYGQIGIGLPIIVSIIAIIMGLNLLEALPIQFPSLNETNWISQDLPAGVRSYLIGLTFGLVASPCSTPVLASLLGWVANTQDLVLGAVLLLSYTAGYVTPLILAGTFTAAIKNLLELRRWSGWINPVSGGLLVGFGVFSLLSRIPIGSF
>NZ_CP011456.1|WP_027403357.1|811757_812165_-|NUDIX-hydrolase
MTRKANKVLQQSGVIPYRIIDGKVEVLLITTRSRQGWVIPKGGLCKGMSPHDSAAKEAWEEAGVVGRVTTEELGNYKYRKRGNTYQVNLFLLPVEIILEDWPEATARERKWLEVNQAAELVKETSLKKIIQNSWI
>NZ_CP011456.1|WP_053537940.1|811206_811701_+|ureidoglycolate-hydrolase
MSALSTIQELPCQLITPENFQPYGQVIYASKDGKNFDQEDAQLNLQNGIPRFYIMRLQKKGRKFHQITRHIKCTQCLGSLEGKDWLMAVCPPDNETNEPLLSKLAAFRIPGNCFIKLSVGTWHAGPYFDHEFVDFYNLELSDTNVVDHFTHNFLKSHNLAFEMI
>NZ_CP011456.1|WP_053537939.1|809843_811187_+|FHA-domain-containing-protein
MPSKITLTITQGKLSRKQYVFESRSTCIVGRNDDCNLQIADKVDMTISRYHCLLDINPPDIRVRDLGSLNGTFVNGKKIGQRQRQQPAQEAVKLSFPEYNLQDGDEIKLGDILFKISVQVEDQLNQIPDLPVPEENEQRNFLTVAEKLINLSQSGHASLQSISGYSLTKSLGKGDFAEVFAAKDIQTKKSIALKIMLPAVANQKNGIEMFLRETENIKILQHPNIVQLLDYGFVENTFFFTMEYFPGGNVWDFMQRSGWRLPIDIAVDITLQVLDGLIYAHEVEIPYIKSVDGIMTKDKGLVHQNLKPNNIFISKINDKIVVKIGDYGLSKAFDLAGLSGQTLTGTKMGTPAFMPRQQVLNFKDELPEIDIWATAACLYNMLTGYFPRNFTGDPWLSVLQNSPVPILQRHHGIPQKLAKVIDLALREQPQIYFQTAAEFKQALLDCS
>NZ_CP011456.1|WP_027403354.1|808851_809112_+|photosystem-I-reaction-center-subunit-PsaK
MLTSNLLATVTTSLEWSPNIGIIMIIANIFAIAVGKFTIEHPNAKPELPAPQLFGGFGLPAVLATASFGHILGAGIILGLHSIGKI
>NZ_CP011456.1|WP_027403353.1|808187_808622_-|SufE-family-protein
MSSTLDSLPPALNKIVHRFQRATEPKRRYEQLIWYAQKLQEFPEDGKIPENKVPGCVSQVYVTASLEDDKVIFQGDSDSQLTKGLLALLIEGLNGSTPTEIVQLTPDFIQETGLNVSLTPSRANGFYNIFKTMQKKALECKLEN
>NZ_CP011456.1|WP_027403352.1|807488_807809_+|DUF2973-domain-containing-protein
MLHLLYILAFTVLAFIAVGNLIRNLIMFSFDRERTYSANQSSQGGFGYYAGRKQYVSHPELLDSAGNMIKEPLLVMRSINIEDAREQLDALYESSPSQKSDRSEGA
>NZ_CP011456.1|WP_053537938.1|806926_807241_+|DUF2605-domain-containing-protein
MRDSNLPSADLLKSVLEPLLEDFQYWFERYSQILENEKIQFMSEQEQLNLLKRVKDAECELNTVRMLFTATEKQVGIDMATVMPWHQLVTECWSVGMRLGQSKE
>NZ_CP011456.1|WP_027403361.1|816289_816703_-|YjbQ-family-protein
MTHYQKLLRVSTNGKSFHNITAKIEAIVAESGIETGLCSLFLRHTSASLVIQENADPDVLLDLANFMTKIVPEGNHYIHDAEGPDDMPGHIRTVLTHTSEQIPINRGHLVLGTWQGIYVWEHRQQNNVRELVVHISG
>NZ_CP011456.1|WP_053537943.1|816831_817929_-|glycosyl-transferase
MKRPTIYIAITNHGFGHATRTASIANTIQKLYPEALLILVTTAPRWLLESYIEGDFILRQRAFDLGVIQADSLTMDKPATLAKLREIQKNHKSLIASEVNFIRQNRVDLILADIPFLAAGFAEATNIPCWMISNFGWDFIYRDWGEEFTEMADWISDWYRKCDRLFRLPFHEPMSAFTNITDVGLTGGSPHFNIDELRNNWGITTSLEKTILMTFGGLGLQEIPYTNTSRFPDWQFITFDASAPDLPNLIKITNHQYRPVDFMPICGRIISKPGYGTFSEATRLEIPVVTIPRHDFAEAAFMLAGIANYNHHQILTTPEFFQGDWDFLDQSPQAPKQPNIIAKDGNETIAKAVIDYLETNIAVCT
>NZ_CP011456.1|WP_053537944.1|818181_819333_-|aminotransferase-class-V-fold-PLP-dependent-enzyme
MNNLHHHRSQFPALSNKLYFNYGGQGPMPQRAMDAITQSQAHIQSIGPFGSEAYSWIAPQIQASREAIASILNVPSDTITLTGNVTVGCNIALWGIDWQPGDHLLLSDCEHPGVIATAQEIARRFAVEVTTCPLMATLNEGNPISIIAENLRPKTRLVVLSHVLWNTGQVLPIDKIVEICKSNNSLLLIDAAQSVGVLPLDLTALGVDFYAFTGHKWLCGPAGVGGLYVRPQARENLHPTFIGLNGVVTNNQAQPTGWQPDGRRYEVSTLPTSLYVGLKEAITIHEQWGTAQERYEQICKNSNYLWQKLNSLPNVKCLKNSPPESGLISFQLTNQPSSKLVQSLESENILTRTIASPNCIRVSVHYLTLESEIDQLIAAIKGD
>NZ_CP011456.1|WP_053537945.1|819418_820534_+|ABC-transporter-permease
MNWWQRLNKNPLARTGAIVLLCFYLAVIGADFIAPYNPYDSQTNGSLLPPTQIHWVSQSGQFIGPHVYPTTQGDTNLETGERKIIIDQTKPSPLRLFVAGPKYQLFNLTISLPPKWQEVTIIPGISLNWHLFGVIGDAKLNILGTDEQGRDQFSRLLHGGRISMFIGIFGIIITYPLALLIGGISGYFGGIIDSIIMRLAEVLMTFPSIYLLVALSGILSPKLTSTQRFLLIILITSVISWAGLARIIRGQVLSIKELEFVQAAKVMGGNPIYIIVRHVLPQTATYIIISATLTIPSFIGAEAVLSLIGLGIQQPDPSWGNMLSLASNASILVLQPWLILPPAILIIITVLSFNVLGDGLRDALDPRSLQR
>NZ_CP011456.1|WP_053537946.1|820843_821767_-|Rpn-family-recombination-promoting-nuclease/putative-transposase
MKTDTIFYQLFQTLPSILFELIGKPATEAEAYQFTSVEIKELAFRFDGLFIPDSEIPEQPIYFVEVQFQPKADFYWRLFTEIFVYLNQYQPKNDFHAVAIFAKRSLDPGVPMQYRGLLMSQQITFIYLDELEVTTDNSIGLGMVQLVVEKEETAIDHTRQLIQKSRQQLADASKRQKVLELLETILVYKLSNLTRQEIEAMFTLDELKQTRYFREVAEEAKVQGKLEGKLEGKLEGKLEGKLEGKLEGKLETVPLLLQLGLTVEQIAANLAVDIEAVRKVAETSVNETPSDSEGTGNGQQGTGKTHV
>NZ_CP011456.1|WP_053537947.1|821904_822930_-|ABC-transporter-permease
MSRSKALQYYIFSRLLFAPLQLLTIITIVFILLRATPGDPADAILGGRAPESAKEELRKQLGLDLPIWLQYLNYLGNLLRFDLGTSLTSRGQNIGEIIGQYFPATVELAFASMAVALIVGVLVGTISASRPGTAFDIGGRLFGIITYALPMFWAGMLLQLVFSVQLGWFPNSNRFPPNLPAPTNITGLYTIDSLLAGNLSQFFISLHHLALPSLTLGILLSGIFERIVRVNLKQTLKADYVEAARARGIPENKILVSHALKNALIPVITVLGLTFASLLGGAILTEVTFSWPGLANRLYQAIADRDYPTVQGVLVFFGAIVVSASILIDILNAYVDPRIRY
>NZ_CP011456.1|WP_053537948.1|823109_824741_-|peptide-ABC-transporter-substrate-binding-protein
MKQWGRMTKLLSLFCLCLLLVVSCTPKQQTNTPQSSAVNTTAGDGRITVGTTEKPRTLDPADAYELGSLSLVFNMSDRLYTYEPGSTEIKPQLATALPKVSADGLTYTIPIRQGVLFHDDTPFNAKAMEFSLQRFIENKGKPSFLLSDTVASVKATGEYELTIKLKKPFAAFPSLLAFSGVCAVSPKSYEIGAGKFKPNIFVGTGAYKLAKYGTDSLKFDVFDKYWGTKPENKGVNVQIQTSPVNLFNAFKTGAIDVAYLSLQPDQIQSLEASAKKGDWQAISAQGSVVTYMTLNRNQKPLDKVEVRQAIASLIDRKLLNDRVLLSQADPLYSMIPTTFNVSQPLFQDKYGDGKFEEAKKSLVAAGFSKENPAKVQIWYPASSMTRSLVAQTLKSLADTKMDGILQFEVKTVEGATFYKEISKGLYPSTLTNWYPDFLDPDNYVQPFLACEKGSVAKGCETGGSQTQGSFYYSEAMNKLIDQQRKEQNPETRKKIFADIQTQVLTDVPYIPLWQNKDFVFAQKGVANVNLDPTQNLIYKTIKK
>NZ_CP011456.1|WP_053537949.1|824966_825542_+|thioredoxin-family-protein
MVLTASTMLPLGTKAPDFHLPEVVSRKIISLDNFADKKPLLIMFICRHCPFVKHIQQELARLDQDYSNSDLGIIAISANDAQNYPNDAPESLKEMCIELGFDFTFCYDETQATAQAYTAACTPDFFLFDGDRKLVYRGQLDDSRPSNNQPVTGKDLRSAITAVLNNQPVTSEQKPSIGCNIKWKVGNEPNY
>NZ_CP011456.1|WP_053537950.1|825862_826375_-|hypothetical-protein
MLTHHRKPVCLSMISTDLPIWSVVDTAGTLIQKDTDKFHLLLTAPPLISCEVGSYLNPEDTIYPTKNNFSPPSSPRILWLEISSRRLIMTMQGNAQVSYRHFWELGVYGISRFWLPNESLQPHQPIRLRNFTKSFTLSGHPFPENLRLEYELWTGKIQLGRYILNLEIQH
>NZ_CP011456.1|WP_053537951.1|826714_828064_+|3-phosphoshikimate-1-carboxyvinyltransferase
MSAIVINLETQANSSDHLIIQRPAAGLSLQGRIRVPGDKSISHRALMLGAIAEGETQIQGLLLGEDPRSTAACFRALGAEISELNTELVKVKGIGLGNFQEPVDVLDAGNSGTTMRLMLGLLASHPGRFFTVTGDSSLRSRPMSRVVKPLQQMGAQIWGRKGNTLAPLAIQGQALQPIHYHSPIASAQVKSCILLAGLNTEGQTTVTEPALSRDHSERMLRAYGAELSIDPDTNSVTITGGSKLYGQTVIVPGDISSAAFWLVAGAIVPGSDLVVENVGVNPTRTGILEALALMGADIQLENQREVAGEPVADIRVRSGGLKSCTIAGDIIPRLIDEIPILAVAAAFAEGTTIIRDAEELRVKESDRITVMAQQLNKMGAKISELPDGMEITGGTPLVGAEVDSHTDHRIAMSLAIAALNAIGTTTIHRAEAAAISYPNFTNTLREICQ

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Crispr_ID: NZ_CP011456_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011456_5

886058-886971

TypeIII

Consensus_repeat	Method
GTTTCCAT-------------TAATTCCACTTCCTATAAAAGAAGCGAT	PILER-CR
GTTTCCATTAATTCCACTTCCTATAAAAGAAGCGAT	CRISPRCasFinder
GTTTCCATTAATTCCACTTCCTATAAAAGAAGCGAT	CRT

12 spacers

WYL,csx1,csm3gr7,cmr5gr11,cmr3gr5,cas10,csx18,cas1,cas2

The CRISPR arrays of NZ_CP011456_5

>merge|NZ_CP011456|5|886058-886971|PILER-CR,CRISPRCasFinder,CRT
GTTTCCATTAATTCCACTTCCTATAAAAGAAGCGATTCCCGAAGAAATCGAACGCCTCTTGACCAATGTAGAAAAGTTTCCATTAATTCCACTTCCTATAAAAGAAGCGATTGCAGAGTACGGAAATGTTGGGTCAAACATCAATATGTTTCCATTAATTCCACTTCCTATAAAAGAAGCGATCTATTTAGGCGTTAGCCTTGTACCCTTCAATTAGGTTTCCATTAATTCCACTTCCTATAAAAGAAGCGATGTATTGGTAAGCACGCATTAGCTAAAAGAGTTCTGTTTCCATTAATTCCACTTCCTATAAAAGAAGCGATTTAGGTTTAGCTAACATTAAGGGATTGGGTGTAAAGTTTCCATTAATTCCACTTCCTATAAAAGAAGCGATAAAGAAGAACCAAAGCACAGATAGTGGCACTTTGTCAAGTTTCCATTAATTCCACTTCCTATAAAAGAAGCGATTTACAAACTATGCAAATATGCCTGAGTCTGTAGCTAGAGTTTCCATTAATTCCACTTCCTATAAAAGAAGCGATCTTATAGCCTGACTTCTGTTAGTTCTCTTGAGGTTCTGGGTTTCCATTAATTCCACTTCCTATAAAAGAAGCGATCTATTTAAAGTTAATTCTCCTAGTGCGTCAATTCCACGTTTCCATTAATTCCACTTCCTATAAAAGAAGCGATGCAGCGAGTGGTCTAGCGAGACTCAGGAAAAGGAAGAGTTTCCATTAATTCCACTTCCTATAAAAGAAGCGATTAATGCAGCAGCAGGCAGTGGGAAGATTGGTATTACTCGTTTCCATTAATTCCACTTCCTATAAAAGAAGCGATTCTCTAGTCCATTCGATATTCGACATTACGCCCTCCAATTTGTTTCCATTAATTCCACTTCCTATAAAAGAAGCGAT

>NZ_CP011456|5|1|886058-886971|PILER-CR
GTTTCCATTAATTCCACTTCCTATAAAAGAAGCGAT	TCCCGAAGAAATCGAACGCCTCTTGACCAATGTAGAAAA
GTTTCCATTAATTCCACTTCCTATAAAAGAAGCGAT	TGCAGAGTACGGAAATGTTGGGTCAAACATCAATAT
GTTTCCATTAATTCCACTTCCTATAAAAGAAGCGAT	CTATTTAGGCGTTAGCCTTGTACCCTTCAATTAG
GTTTCCATTAATTCCACTTCCTATAAAAGAAGCGAT	GTATTGGTAAGCACGCATTAGCTAAAAGAGTTCT
GTTTCCATTAATTCCACTTCCTATAAAAGAAGCGAT	TTAGGTTTAGCTAACATTAAGGGATTGGGTGTAAA
GTTTCCATTAATTCCACTTCCTATAAAAGAAGCGAT	AAAGAAGAACCAAAGCACAGATAGTGGCACTTTGTCAA
GTTTCCATTAATTCCACTTCCTATAAAAGAAGCGAT	TTACAAACTATGCAAATATGCCTGAGTCTGTAGCTAGA
GTTTCCATTAATTCCACTTCCTATAAAAGAAGCGAT	CTTATAGCCTGACTTCTGTTAGTTCTCTTGAGGTTCTGG
GTTTCCATTAATTCCACTTCCTATAAAAGAAGCGAT	CTATTTAAAGTTAATTCTCCTAGTGCGTCAATTCCAC
GTTTCCATTAATTCCACTTCCTATAAAAGAAGCGAT	GCAGCGAGTGGTCTAGCGAGACTCAGGAAAAGGAAGA
GTTTCCATTAATTCCACTTCCTATAAAAGAAGCGAT	TAATGCAGCAGCAGGCAGTGGGAAGATTGGTATTACTC
GTTTCCATTAATTCCACTTCCTATAAAAGAAGCGAT	TCTCTAGTCCATTCGATATTCGACATTACGCCCTCCAATTT
GTTTCCATTAATTCCACTTCCTATAAAAGAAGCGAT

>NZ_CP011456|5|5|886058-886971|CRISPRCasFinder
GTTTCCATTAATTCCACTTCCTATAAAAGAAGCGAT	TCCCGAAGAAATCGAACGCCTCTTGACCAATGTAGAAAA
GTTTCCATTAATTCCACTTCCTATAAAAGAAGCGAT	TGCAGAGTACGGAAATGTTGGGTCAAACATCAATAT
GTTTCCATTAATTCCACTTCCTATAAAAGAAGCGAT	CTATTTAGGCGTTAGCCTTGTACCCTTCAATTAG
GTTTCCATTAATTCCACTTCCTATAAAAGAAGCGAT	GTATTGGTAAGCACGCATTAGCTAAAAGAGTTCT
GTTTCCATTAATTCCACTTCCTATAAAAGAAGCGAT	TTAGGTTTAGCTAACATTAAGGGATTGGGTGTAAA
GTTTCCATTAATTCCACTTCCTATAAAAGAAGCGAT	AAAGAAGAACCAAAGCACAGATAGTGGCACTTTGTCAA
GTTTCCATTAATTCCACTTCCTATAAAAGAAGCGAT	TTACAAACTATGCAAATATGCCTGAGTCTGTAGCTAGA
GTTTCCATTAATTCCACTTCCTATAAAAGAAGCGAT	CTTATAGCCTGACTTCTGTTAGTTCTCTTGAGGTTCTGG
GTTTCCATTAATTCCACTTCCTATAAAAGAAGCGAT	CTATTTAAAGTTAATTCTCCTAGTGCGTCAATTCCAC
GTTTCCATTAATTCCACTTCCTATAAAAGAAGCGAT	GCAGCGAGTGGTCTAGCGAGACTCAGGAAAAGGAAGA
GTTTCCATTAATTCCACTTCCTATAAAAGAAGCGAT	TAATGCAGCAGCAGGCAGTGGGAAGATTGGTATTACTC
GTTTCCATTAATTCCACTTCCTATAAAAGAAGCGAT	TCTCTAGTCCATTCGATATTCGACATTACGCCCTCCAATTT
GTTTCCATTAATTCCACTTCCTATAAAAGAAGCGAT

>NZ_CP011456|5|1|886058-886971|CRT
GTTTCCATTAATTCCACTTCCTATAAAAGAAGCGAT	TCCCGAAGAAATCGAACGCCTCTTGACCAATGTAGAAAA
GTTTCCATTAATTCCACTTCCTATAAAAGAAGCGAT	TGCAGAGTACGGAAATGTTGGGTCAAACATCAATAT
GTTTCCATTAATTCCACTTCCTATAAAAGAAGCGAT	CTATTTAGGCGTTAGCCTTGTACCCTTCAATTAG
GTTTCCATTAATTCCACTTCCTATAAAAGAAGCGAT	GTATTGGTAAGCACGCATTAGCTAAAAGAGTTCT
GTTTCCATTAATTCCACTTCCTATAAAAGAAGCGAT	TTAGGTTTAGCTAACATTAAGGGATTGGGTGTAAA
GTTTCCATTAATTCCACTTCCTATAAAAGAAGCGAT	AAAGAAGAACCAAAGCACAGATAGTGGCACTTTGTCAA
GTTTCCATTAATTCCACTTCCTATAAAAGAAGCGAT	TTACAAACTATGCAAATATGCCTGAGTCTGTAGCTAGA
GTTTCCATTAATTCCACTTCCTATAAAAGAAGCGAT	CTTATAGCCTGACTTCTGTTAGTTCTCTTGAGGTTCTGG
GTTTCCATTAATTCCACTTCCTATAAAAGAAGCGAT	CTATTTAAAGTTAATTCTCCTAGTGCGTCAATTCCAC
GTTTCCATTAATTCCACTTCCTATAAAAGAAGCGAT	GCAGCGAGTGGTCTAGCGAGACTCAGGAAAAGGAAGA
GTTTCCATTAATTCCACTTCCTATAAAAGAAGCGAT	TAATGCAGCAGCAGGCAGTGGGAAGATTGGTATTACTC
GTTTCCATTAATTCCACTTCCTATAAAAGAAGCGAT	TCTCTAGTCCATTCGATATTCGACATTACGCCCTCCAATTT
GTTTCCATTAATTCCACTTCCTATAAAAGAAGCGAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011456.1\|WP_053537989.1\|874387_877285_+\|type-III-B-CRISPR-associated-protein-Cas10/Cmr2	cas10	cd09679_cas10_CAS-III	gnl\|CDD\|378863
NZ_CP011456.1\|WP_027402694.1\|873640_873919_-\|PipX-family-protein	unknown	unknown	gnl\|CDD\|371872
NZ_CP011456.1\|WP_053537996.1\|889293_891210_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|375989
NZ_CP011456.1\|WP_053537990.1\|878686_879127_+\|hypothetical-protein	cmr5gr11	cls000022_cmr5gr11_CAS-III-B	unknown
NZ_CP011456.1\|WP_053537994.1\|885133_885706_+\|transposase	unknown	unknown	gnl\|CDD\|224854
NZ_CP011456.1\|WP_081424131.1\|877543_878674_+\|CRISPR-associated-protein	cmr3gr5	pfam09700_cmr3gr5_CAS-III-B	gnl\|CDD\|187879
NZ_CP011456.1\|WP_053537992.1\|880981_882691_+\|hypothetical-protein	csx1	mkCas0109_csx1_CAS-III	unknown
NZ_CP011456.1\|WP_053537988.1\|872954_873644_-\|YggS-family-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|223402
NZ_CP011456.1\|WP_053537998.1\|893359_895003_-\|PfaD-family-polyunsaturated-fatty-acid/polyketide-biosynthesis-protein	unknown	unknown	gnl\|CDD\|240093
NZ_CP011456.1\|WP_027402676.1\|906514_906844_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053537999.1\|895241_897893_-\|type-I-polyketide-synthase	unknown	unknown	gnl\|CDD\|225858
NZ_CP011456.1\|WP_039203185.1\|888550_888829_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP011456.1\|WP_053537987.1\|871985_872588_-\|cell-division-protein-SepF	unknown	unknown	gnl\|CDD\|224712
NZ_CP011456.1\|WP_053538000.1\|898153_905062_-\|type-I-polyketide-synthase	unknown	unknown	gnl\|CDD\|274311
NZ_CP011456.1\|WP_027402681.1\|891293_891599_-\|acyl-carrier-protein	unknown	unknown	gnl\|CDD\|376348
NZ_CP011456.1\|WP_081424132.1\|879086_880997_+\|hypothetical-protein	csm3gr7	pfam03787_csm3gr7_CAS-III-A:CAS-III-D	gnl\|CDD\|213662
NZ_CP011456.1\|WP_053537997.1\|891599_892928_-\|alcohol-acetyltransferase	unknown	unknown	gnl\|CDD\|181765
NZ_CP011456.1\|WP_039203187.1\|887264_887519_+\|hypothetical-protein	csx18	cls000006_csx18_CAS-I:CAS-III	unknown
NZ_CP011456.1\|WP_053537995.1\|887558_888551_+\|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|376633
NZ_CP011456.1\|WP_053537993.1\|882939_885015_+\|WYL-domain-containing-protein	WYL	pfam13280_WYL_CAS-I:CAS-III	gnl\|CDD\|379324

Protein	Function_ID	Function_description	E-value
NZ_CP011456.1\|WP_053537989.1\|874387_877285_+\|type-III-B-CRISPR-associated-protein-Cas10/Cmr2	gnl\|CDD\|378863	pfam12469, DUF3692, CRISPR-associated protein. This domain family is found in bacteria and archaea, and is typically between 101 and 138 amino acids in length. The proteins in this family are frequently annotated as CRISPR-associated proteins however there is little accompanying literature to confirm this.	2.22173e-37
NZ_CP011456.1\|WP_027402694.1\|873640_873919_-\|PipX-family-protein	gnl\|CDD\|371872	pfam12058, DUF3539, Protein of unknown function (DUF3539). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 90 amino acids in length. This protein has a conserved NHP sequence motif.	3.32805e-50
NZ_CP011456.1\|WP_053537999.1\|895241_897893_-\|type-I-polyketide-synthase	gnl\|CDD\|225858	COG3321, COG3321, Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism].	1.71497e-86
NZ_CP011456.1\|WP_053537994.1\|885133_885706_+\|transposase	gnl\|CDD\|224854	COG1943, COG1943, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	3.43129e-13
NZ_CP011456.1\|WP_081424131.1\|877543_878674_+\|CRISPR-associated-protein	gnl\|CDD\|187879	cd09748, Cmr3_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; This protein is a subunit of Cmr complex.	2.38135e-33
NZ_CP011456.1\|WP_053537988.1\|872954_873644_-\|YggS-family-pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|223402	COG0325, COG0325, Predicted enzyme with a TIM-barrel fold [General function prediction only].	1.22756e-92
NZ_CP011456.1\|WP_053537998.1\|893359_895003_-\|PfaD-family-polyunsaturated-fatty-acid/polyketide-biosynthesis-protein	gnl\|CDD\|240093	cd04742, NPD_FabD, 2-Nitropropane dioxygenase (NPD)-like domain, associated with the (acyl-carrier-protein) S-malonyltransferase FabD. NPD is part of the nitroalkaneoxidizing enzyme family, that catalyzes oxidative denitrification of nitroalkanes to their corresponding carbonyl compounds and nitrites. NDPs are members of the NAD(P)H-dependent flavin oxidoreductase family that reduce a range of alternative electron acceptors. Most use FAD/FMN as a cofactor and NAD(P)H as electron donor. Some contain 4Fe-4S cluster to transfer electron from FAD to FMN.	0
NZ_CP011456.1\|WP_039203185.1\|888550_888829_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	2.70192e-32
NZ_CP011456.1\|WP_053537996.1\|889293_891210_-\|hypothetical-protein	gnl\|CDD\|375989	pfam18563, TubC_N, TubC N-terminal docking domain. This is the N-terminal docking domain found in TubC proteins from the tubulysin polyketide synthase and nonribosomal polypeptide synthetase (PKS-NRPS) system, which binds to C-terminal docking domain of TubB.	2.09461e-12
NZ_CP011456.1\|WP_053538000.1\|898153_905062_-\|type-I-polyketide-synthase	gnl\|CDD\|274311	TIGR02813, omega-3_polyunsaturated_fatty_acid_synthase_PfaA, polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.	0
NZ_CP011456.1\|WP_027402681.1\|891293_891599_-\|acyl-carrier-protein	gnl\|CDD\|376348	pfam00550, PP-binding, Phosphopantetheine attachment site. A 4'-phosphopantetheine prosthetic group is attached through a serine. This prosthetic group acts as a a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups. This domain forms a four helix bundle. This family includes members not included in Prosite. The inclusion of these members is supported by sequence analysis and functional evidence. The related domain of the anguibactin system regulator AngR has the attachment serine replaced by an alanine.	3.56694e-10
NZ_CP011456.1\|WP_081424132.1\|879086_880997_+\|hypothetical-protein	gnl\|CDD\|213662	TIGR01898, repair_system, CRISPR type III-B/RAMP module RAMP protein Cmr6. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This family, represented by TM1791 of Thermotoga maritima, is designated Cmr6 [sic], for CRISPR/Cas Ramp Module protein 6. This family is both closely related to and frequently encoded next to the TM1792 family of Cas proteins described by TIGR01867. The two proteins are fused in an example from Methanopyrus kandleri.	7.92605e-18
NZ_CP011456.1\|WP_053537997.1\|891599_892928_-\|alcohol-acetyltransferase	gnl\|CDD\|181765	PRK09294, PRK09294, phthiocerol/phthiodiolone dimycocerosyl transferase.	7.44162e-11
NZ_CP011456.1\|WP_053537987.1\|871985_872588_-\|cell-division-protein-SepF	gnl\|CDD\|224712	COG1799, COG1799, Uncharacterized protein conserved in bacteria [Function unknown].	3.10261e-51
NZ_CP011456.1\|WP_053537995.1\|887558_888551_+\|CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	1.65691e-105
NZ_CP011456.1\|WP_053537993.1\|882939_885015_+\|WYL-domain-containing-protein	gnl\|CDD\|379324	pfam13671, AAA_33, AAA domain. This family of domains contain only a P-loop motif, that is characteristic of the AAA superfamily. Many of the proteins in this family are just short fragments so there is no Walker B motif.	2.46353e-17

>NZ_CP011456.1|WP_053537994.1|885133_885706_+|transposase
MPQRKTPWQSGNFYHIYNRGNNRQDIFFERENYIYFLRLLKEHLIKNVVDIVAYCLMPNHYHLLVYLRDETLSDAMKSLSLAYTKAINKRFNRSGVLFQGRFQSIHIQETEYLVNLSRYIHLNPVKAGIVNHPGEWEFSSYLEYAGLRPGTLPNIEYIKTQIESESIYQQFLLDHNLPNSTDFKKLLLDD
>NZ_CP011456.1|WP_053537993.1|882939_885015_+|WYL-domain-containing-protein
MSTPPICHILIGVPGSGKSTFATELAKLGNYRIVSTDVIRQELYGDTTIQGDWIDIEAAVISQITAALAQNNAVVYDATNAKRAWRLDLLEKLKLVVASPVLWMGWYLKTPLLTCKGWNQQRTRQVPDVVIESMHQWLQDFPPMAAEGFAAVKEVDVTSPKFNFHQISTQIQQLSRTLINRTNRNSQITFHAYSKLLDFERLMYLISLIINYPGIGNLQATHPSLLASILGKIPQFTSSLEEITACISQLYGNIYADEIAIASNLLWLQQNSLIGVNSISSPSHLPISPGAVSLTASVAVVTHPYSDLPAFQRLLQTIRFILHHPFLSNSGQGSLKTLLSALQEYEIIDGNTLDSVRKDIEKVLKPYKILHNFSMRDGYFAGTAILSALELTQVFQVLQSQAQSLNDPIALEIYETFATRMAQSRLGVSDIYPVRAIANRSMIDPEYLPAESLARNLQQVEEAIAKGQLLELNRFSGGGKFTLDEEGFFLGFPLQIVFSNTAWYLGYECVSGKYNGLFRFERLDRLFIGQIQTKVRSRQEQESALKKLQKLSQGSAGIFLGYNPQDQQQFLSVNKKERSLVCITIELWFNDELFRFVAEGTKRFPPQQMKMSLPITGKRLTLPKSIFCLDKTENKNYPHRFQVILPQWSLDDVELLRWILGFKGGVKVIKPKSLVNKLKQIGEDIVNVYRY
>NZ_CP011456.1|WP_053537992.1|880981_882691_+|hypothetical-protein
MEFYLENISGTNMTILIANIGNSDLSIKVDEYYFPVGFDRNEPNIDYSGLTPDDKVAWDERKTFIEQTVCHELGLDKFSFREFTKRLKIAYIQDNNKWHQRIRPGRIWGVIKEARDRFQIKNAYIFITNQPPGVGYDTDSIHLFELLQYWFNIEFTKDIKLHPILITENISAINQDGLLHEYYKFFGSLDKNEQILISIKGGTYQMQTALRVQAMSSEIQNQIFLDPILSIKDVLAGEPSRCQQISYWRYNRTQKYQIIKQLLERWDFDGSSQILKEWIETLEQLSKSGVTDIADSKAAIESVVKSLDMAVCYFNLDSLGARRVINSSEALGIFKQISVKYNKSLNLYTQCCIYWELNQVANFLSRLGSFCEENLHYLIIKLDGLKYFDKINYAHDWYLDKRKVEPRLWQYFEQNENKNNSSWANWNFQHKPKYRLPGRFSKWNFVNALIQHRDKVKEKASWEKITTSLDNLDYWIEKRNNLIHSAEGISKENMSKILKEDKENCDNEQEFVACKPEEIIAEITIIIDQTYKLLNLTESKFVNLDKTNYYIYSEVKNWVIDKLMTDGLS
>NZ_CP011456.1|WP_081424132.1|879086_880997_+|hypothetical-protein
MSSQHITKILLRDNTLGELLMTDSYHSWEKPKLKQPRNKISAGNTDGDGNIINNLSQPSPWLDHPDLPDKLSHNNASFVEYLRWMRVKSGDGTIDGGTILELFQEFKNNDVSKSLSRLTSRTKKLSHEWFEVTCPWRIRVGGTKGPESMLLPAFDALGMPYIPSSTLKGVARAIAMQDPNFTEEQIKHIFGDINPNSSMGLVIFLDAYPLPGEDKQGGLSPDMANSIWKWDRTTPPEYNTNPNVFISLKKSTFVIGLRQGNDCYEEIFNQVIVWLKRGLGYGIGSRVNTGYGSLDVKDEKPKRRLRILAVIFKLKGQLIHGGQKFTAWRPKDDGGWKPPGKALAEVRPTAFRSTMRYWFRALALGVLSNNQEIRDLELEIFGDIEPKPHTGLFRSEITNGRNQENTKKNENYSLAEGELILHHSSQTISLLENKKQALEQLLQNLTWLMFHLGGVGQGSRRPCYSRQNRSNPPWWRGASLTVISKDDFWKIPNNLNELKLIFRLRLQGFYTALQQFREKEEINYHHPRSILTPTPQTWAEVVDSNCRIVCVTGSTEKNKLFALAKLHEIEYQGRRYHRHLCGSTAKPSPVWIAEVGNFQVVTIFGVNEDSDNPRKQYLDKLQEQAGSNYSEIWNFI
>NZ_CP011456.1|WP_053537990.1|878686_879127_+|hypothetical-protein
MLTYDPRTISTHVYQSLSNLQQDTINQAAQKEQKSQAVELYTYIATWGLLRLKAEEFALSQNSKKDVVKCFFQILGKIAFPEKPDHFLERQGLNNLTKRGDSESFNASEYLGLTGLALQIAREFAFWAEAVYPDVQPTHNQDTTAG
>NZ_CP011456.1|WP_081424131.1|877543_878674_+|CRISPR-associated-protein
MYWYSIEPLDVLLFREAKPFSPSEGSWAKGQFPPLPITVFQSLRSALEQYQQKNRDLEFLGSFLLDQDDNLWLPTPKDLLAVSKRRINEEAGGDDLDEKTNDWHRIERLQPIEEKVRKYIPFDSDELKPMVTPSIKPDEFICGRPQPWIKADALIQYLQGETLTNSKDFHEDPWSVQILPHIRMQSGTRQVRDEEGYFTEVAIRLRSGWRLVAAISAKLEQMVVRLGGEGHRALISSLPDFQPWRNLATYEQPKDGSNFAYLLTPGIAEKQPALYGVYPINWQENLSGCVSDRPLLWGGVSTIQRKEQDKEFALLPQRAFVPPGTVYLFPWGTNVAMNDKGDTASATFKSLLQQQTSWQLGGQESLGRGFVELWSN
>NZ_CP011456.1|WP_053537989.1|874387_877285_+|type-III-B-CRISPR-associated-protein-Cas10/Cmr2
MNVYHRKLYALLQESTNAIQPPAILEKLQCLQSHKENLQDWWCCLGKQASDISSSSDQVNLNTHDKSGNSVFHLRHPISAQSKTVTAPDQSAMVKISQIVQQTDDVEKVFWWFWRFYPEMLANNAPEALLIPSNRVLPDSPVHSYKSTVSALVGAMFPSDWRSESEKPEHPYPYPYLLLFTFSPVQEFIKSSRKFLDFWAGSYLLHYLSAKLCWYVAEKYGPDAVITPSLWSQEIIDAFIVKKYPDMKGEFKHTSNRTDPVNLFNQSQSTSLSTAGFPNVITVLVPGKEAAKELGKELNEQLAKEWQAIAHPIRSNIKTKVIEWLTQPNNLKSLEAEATDADLRDLQKWQQHGCWEWNKLWDAQINNTWESYWTAVPLGNPEQALEISKNQDGFNIDWIEATEAIAPSRHDNPTPTEAEKQAYQSLNVGTWWANVQSRLGKLIQSVKNTRRWSLPVSPGERSTLSGQFSAVHPNLLYNEQFREGGGLSSGSMGLFWRLMSLVYPGLFNGSEKLNAIELTKRMAWGYGGVAESLGIQVNCKDEEIDHEKLIRFPNLSSIAAARFAHDHPSKVNGYWDYLDKLIQQEFLPKQHHKFDYRTRRRPFHIYKTDEKINPDNRDGQDYNGVMFSSKWLSEDMGLQDKEEIKTLRSLVEQAHKQSGFSDGSPSDWWVIVLADGDNMGKYVSGAKLENYDKYIVEDAVDKNNLNNENWLKLLDTKKRMGPATHVGLNRALLDFSNRLVPYLTEKRFCGKVIYSGGDDVMAVLPLEDLPEYLLSLRAAWCGGNDPYNEFKNEGGYWIPQSNIPGISNRPHFTMGAGATMSIGVVIAHKSVPLPTVLENIWEAEKERAKKLPDKDGLCFRVIYGGGNTLEAVMKGELLESWYGLVNSPSEELSPLLLRLAEELPRRAAVTENCQLFGKAANVIMNRRDESKKLDNFPSIVTWLNKWEDWVKRLEKEKQALASLLW
>NZ_CP011456.1|WP_027402694.1|873640_873919_-|PipX-family-protein
MNPENSETYINHPTWGLLYRICMVDENQDLFTTLYAQRLFFLVTTELKVLKFQPIGRTEARMMLENRLRTLRRSGNSQEYEQLQGVFQRTFQ
>NZ_CP011456.1|WP_053537988.1|872954_873644_-|YggS-family-pyridoxal-phosphate-dependent-enzyme
MSSLISDRSAHIRQRLTHIHASLPSTVRLIAVTKRVSTELMREAYTAGIRDFAESRIQEAASKQAELQDLADITWHLIGHLQTNKARKALELFSWIHSVDNLPLAQRLNILAAELGVNPKVCLQVKILPDANKSGWMVPELLADLAALNQCQNLQIQGLMTIPPQGLADAEILTVFNTTYELAQTIQSQNWPNITMQQLSMGMSGDYQLAVQAGATMVRLGTILFGERA
>NZ_CP011456.1|WP_053537987.1|871985_872588_-|cell-division-protein-SepF
MSNIFSKLRDFVGLNEQVEYEYYEEEADTTNNYQNIYQQENPQPAPQETTPPNRRWRENQPNSTEEVAATVSKPMSNVIGMPGAINGISEVLVLEPRTFEEMPQAIQALRERKSVVLNLTIMDPDQAQRAVDFVAGGTYALDGHQERIGESIFLFTPSCVQVSTQGGLIHEVPINQARPARPAATAATTAWGNEPTRMAQ
>NZ_CP011456.1|WP_039203187.1|887264_887519_+|hypothetical-protein
MYISNRAALVRNLAVAFLNGTITLIILLIAPLGLAAVIINTILVTIATFANATAGDRVVRFLQPSQIKTMIAEIMSQQSQITKD
>NZ_CP011456.1|WP_053537995.1|887558_888551_+|CRISPR-associated-endonuclease-Cas1
MRTLYVSRQGCYISLKGETLIIKQGEIVHGEVQLPLLEQILIFGKSQITTQAIRTCLWRDIPIAYLSRMGYCYGRLMPIERGYRRLSRYQQELTAIDKLIAARTIIQAKLKNSRTFLQRQQRRNPSQTAEITIKSLEVLAQKAGEAETIERLMGLEGAGAAQYFNAFGECLNNPDFVFLARSRRPPGNPVNAMLSFGYQILWNHLLTLIELQGLDPYYACLHQGTERHAALTSDLIEEFRAPIIDSLVLWLVNTKIMNIDNDFEYHDSGCYLNNSGRPKYIKYFLQRLEEEVQNSEGEKQPRWDLMTQQIKAFKDFVYQPSKLYKPYQIR
>NZ_CP011456.1|WP_039203185.1|888550_888829_+|CRISPR-associated-endonuclease-Cas2
MLLYVIVYDITCDKRRKKVSDLLEGYGQRVQYSVFECILNQTKYSELQKRLRKQIKSSEDSIRFYPLSKHTFNQIETWGEPPVTELPGSTII
>NZ_CP011456.1|WP_053537996.1|889293_891210_-|hypothetical-protein
MEPGVLFSKFLFLNTGDFVMNAAEILAKLTQQGVLFWSENSKLNIRSPKGVITPEIQIEIAKYKEDILALIQEMNVTNDYVHEPLMQGISLQTIGKLIGGFSGESPTGYQIPVINPQFMAENLKVTFRPLPDYYDNQVIVRFRQQLIFYLQKHGVKVIPWKEATTELKHTIKIPVINWHKSLKMQSVRADIDAVIDVERPNSWLRKLGIFVAETWYKLSYTWLKEKQKMSVVQIAKLSSWAEDHAAKYVEDPTNTQVIILTDIDDEFVNPLTPYPEKIRIGINTLVKTFSEIVIGVSHEKFSILNMNLSDSNFAPHEVENFALKSLIPKVFVPITPLLISRFEIGEYNPHLSSYAGKLIKLGQDLASTGLFPAGFKLDEVVKRKSHRDIVNVIVNGRTGVSYGFVAYAEPPHYVGKPEITIDEWDNLLPVAGFSSYELRQNEQGRRYIKLNINAENRFKQIPDIWLVSSRSGANKTDLSIDTDILRIGLQDKLHLQLPLGSNAQKADIKPSYDIYVMLAISLAAALYTPELIANGAPIVHFHGYPDVDWFQEKEYCVGMNNPSVPCGTYESGVFNFLGIADLGDQIISDVNLISLVEPDHGTNFIANDLEYLVNRLKAGCVTGQIELGGKNFPSLKNR
>NZ_CP011456.1|WP_027402681.1|891293_891599_-|acyl-carrier-protein
MNNNISNSLSENQDNATKIQAWLVSEISSLLGVNPEEINIREPLDSYGLDSAQTIVIASKAEKFLGFKLSLIHLWYYPTIEELSLRLSEELENSQSEIIQI
>NZ_CP011456.1|WP_053537997.1|891599_892928_-|alcohol-acetyltransferase
MAINRKLGQLEETMEILNQRAKTWNVVTISRIRGNIQETVLRQSLNIIQYRHPALNSHIINSRNSYYYQSKGTGKLPLQVVNIRESQEWEAIVNAEMNQVIDSSKYLLRVVLVKILNQQNINYLITTTHHAITDGLSSVQLHSEILTYCQKITEGKSLPIVTTLERLPPIEKLLPTWTNSFKSKLGRVALLLNIALQKYWNQPKALRVEKYVPISQRRCEIIHRQLSEESTRQFIQQCRQENTTVQSALCAALMLTVSKQLAKNHEDNIPVSCLSYLDLRRRLQPEISTENMTVLAASLMKFYRITNNTSFWELARKVKHNLNEKIHQGEIFQMIYLAKYLINFSLLFPNQVSPTVSVSNLGKVNIPHNYGELELEEISFVGSHALYAGMFIVHAATFQEKMTLNFVFSQPSLNQQTMERLVDHCIDSIMKVSSRYLIPVGT
>NZ_CP011456.1|WP_053537998.1|893359_895003_-|PfaD-family-polyunsaturated-fatty-acid/polyketide-biosynthesis-protein
MLKQHQQLKFSPSMNNNYQGWQGDLNTVSFDAKNIKNKLMNLDSPCYILNKEGQIGISNEGSLSYSANGKTQKLEMLLTVPPIGFHQLGDPAFLEFYSVKYAYMTGAMAQGIASEEMVITLGKANILSSFGAGGLSPTRIEAAIHKIQQALHNKSYAFNLLHSPSEPAIERRLIDLYLQHQVRIIEASAFLDLSDNIVYYRAAGLSLNSANEIEIKNKIIAKVSRREVATKFLQPAPTKILTQLVEQGLITELQANLAAKIPMADDITVEADSGGHTDNRPLVCLLPSILELRDEIQGKYDYEKPVRIGVAGGISTPQSALAALMMGAAYIATGSINQSCVEAGTSEYTKKLLAEAEMTDVMMAPAADMFEMGVKLQVLKRGTLFPLRAQKLWELYRNYNSFAEIPPDEIEKLEKQILRKTISEIWQETSTYLSQRNPEKLSKAANNPKLKMALIFRWYLGLSSRWSNTGEKGREIDYQIWCGPAMGSFNNWVRGSYLADINNRRVVNVADEIMTGAAYLYRIQNLKIQGLQMPEEYSQYHPQSSLG
>NZ_CP011456.1|WP_053537999.1|895241_897893_-|type-I-polyketide-synthase
MKSIAQNQKLAIVGMDCFVSNSPTLNKFERLIYESKQNLVTSENYQQTPLSRELINSALEDAKIQPETKIALIIISPTENSAKLANYISAELAFFAEENSLLSALDVSQKLLTTQQVEAVLIVGIDKSYPIEINEGVYTFSYDEKAENVIKTAGAAAVVLQLHETAKQQNHCIYAIMDGFSVVKHSPNHPETITQACQNAFQIADVQAADIGYLEVVARGTANADIAEIQGLISAYHTGGENLSCGLGSVKANIGNTQASSGIFSLIKTALCLYHRYIPGVPQWSNPKQPEIWRGSPFYVAVESKPWFLEPGATKRVAAVNMMEENNIYGHLILSEEISQVERSSQYLAEMPYYLFPIAADDRSSLLTQITALQQSFTNGSSISQLANDYFQKYQQYKQSTYALAILSRHPEELKREIERAIQGVKIAFATGKDWQTPLGSYFTVNPQGKKGHVAFVYPGSFTSYIGLGRNIFRLFPQLHNDVVIKSVYNRVANIEKILYPRSINKLLRRQLESIEQTLIDDPVSMLESEVGIAGLMTAILKNYFQIQSPYSFGYSLGETSMMLAQGVWTSFKSTSDYLNSSPLFKTRLSGPKNAVRQHWGLPLIHEGKREEFWSNYILICSYSLVQEVLKNESRVYTVLINTPEEVIIAGETKACERVIQTLKCDAFPTSINHVIHCEPMHSEYDELVKVNTLPIQTNSKTIFYSAAEYAPMKIDSHLIGKNIAKALCHQLDFPRLVNRAYNDNVRIFIEVGVGSNCSRWISEILKDKGHLAVSLNRRGVDDHTSIIKALAKLFSHRIELDLSPLYSLPNIKFAEDTSLLDYQHKMTPIPNYQSLNKNNARMAKAHNFLLQSRQTSLQQLSLFLQQQLDLYKKMVIQAKKEQ
>NZ_CP011456.1|WP_053538000.1|898153_905062_-|type-I-polyketide-synthase
MAISQFETAFTQLKDEISNCEKSVLKMIKVKKNMPETTNMKNEINAKLRTTDVAIVGMASIFPQAKSLQEYWENIVQKVDCITDVPASRWHIDDYYDPDPKTPDKTYCKRGGFLPDIDFNPMEFGLPPNILEVTDISQLLGLVVAKEALEDAGYGASRQFNHERTGVVLGVAIGRQLAVPLGARLQDPLWKKVLKNSGLSDEDSQKIIEKLKSGYVQWEENAFPGMLANVISGRIANRLDLGGMNCVVDAACASSLGALRMAVSELVEHRADMMITGGVDTDNSIFAYMCFSKTPAVSPGEKVRPFDADADGMLLGEGVGMLVLKRLEDAQRDGDRIYAVIKGVGSSSDGKYKSIYAPRAEGQIIALNRAYTDAGVSPASIGLIEAHGTGTMVGDPTEFTSITSVFGENNPKKQHIALGTVKSQIGHTKAAAGAASLIKAALALHHKVLPPTINVSTPHPKLNIENSPFYLNTETRPWVSHPTQPRRAGVSAFGFGGTNYHVVLEEYEHEHHHPYRLHHTPQSLLLFAPTPSELLSRCQQIQQQLQNENKEKYYQQLITDSQTAKIPVNYARVGFVADDLGQAGELLQIVIEGLRNKPEAKSWEHPQGVYYRQKGTDTTAKVVALFSGQGSQYLEMGRELVMNFPCLRQTYTHMDSLLCEDGLQPLSSVVFPQPVFDETKKQIQLATLQKTEYAQPAIGVFSAGLYKILQQAGFKPDFVAGHSFGELTALWVAGVLNEEDYLFLVKARGQAMAAPANPNFDTGGMLAVKGDIHQITEVIKKFPQVAVANKNSQHQVVLAGKKEEIIQVQDILKNQGLTTFLLGVSAAFHTPLVSHAQKPFAQAVEKVNFNEAQIPVYTNVTGSRYPQEPHAIQKILKEQLLNQVLFQQEIENIYAAGGYYFVEFGPKSVLTNLVKEILSDKPHIAIAVNPSHTKNSDKTLRQAIVQLQVAGLYLQNLDPYQVATKIPEVPAKKVLNVRLNSTNITERTQKAFAKALENGHHVGVVSPQPTIDNKPPTAFNENHQPQGNNKPPTSFNENHQPQGNNDHPTSLNGKLEQVEIQPDNQGKVIHNLEKIITEFSQQQRDIIHVHEQSLHNQTEYTKTFSQLMQQQYLLLGNNQTTEHQSQTQQLAISNSEQNMMRFHDHQGDTLRIHEQYLKYQHEYTQNYFQLLQKHLHLLTSENKVINFVNHPQIQQDLENDQKPDLLNQNISEPLPLCASAPLREEKTFVNHPQIQQDLENDQKPDLLNQNISEPLPLCASAPLREEKTIPNIDKATLSQTLLNVVSDKTGYPVEMLELSMDMEADLGIDSIKRVEILGGLLELHPDLPKPNPEELGQLRTLEQIAEYMQTLVPDILNQQVEISTAIISKEVLVEVPQPELIPATPVVEEQQQEGEIFQDLSDILLTVVSDKTGYPVEMLELSMDMEADLGIDSIKRVEILGGLLELYPDLPKPNPEEIGELRTLGEIATYMQQQAQRIPNLLTEEIVEDITITSVPNIRRSIAKLQQLPTPDSLEFSLSENHIALITDDGSSTTEKLAESLIAKGWKTVVLSFPGVESNVNAGINRVVLTDWNEDSLQQQLKQIADNYGTVAAFIHLHPATSLDIDKSILRHVFLIAKYLKEPLNAAAKFGRSCFISVARLDGEFGLGESHNFSAISGGLFGLSKSINQEWENVFCRSLDLNPDLDSETSVKNILAEIYDANLLIQEVGYSNKGRVTLIADFSPLPTTNSAREITKDQVFLVSGGAKGITAQCVIKIAQQYQCKFILLGRSTTEVEPVWAENCENEAELKQRILENFQAQGEKPTPIMVQKKYQIISSQREIQNTLKAIVEAGGEAEYLSVDITDTVLLESKLADVIERFGAITGIIHGAGNLADKRIEKKSIQDFENVYAAKVKGLENLLRCVPASQLQYLVLFSSVVGFYGNAGQSDYAIANEILNKSAHLIKHNYPNCHVMAINWGPWESGMVSSELKKAFAARGIEVIPVETGTQILVDELTTANQGTVQLVIGSPLIYVPATLSNDLKTYRIKRRLTLTENPFLQDHVIAGRPVLPATCGLLWMTNACEQLYPGFTAFSSPNFKVLKGIVFGEDFASEYILELQELAKHENQEIEFAAKISSQTPDGKIRYHFSTNLILKREIPTPPSYVNLNFNQDENFLKTNQELYQVNASSLFHGFTFQGVKSVLNTSPSQITIECCLPEPTTQQQGQFPVQTFNPYIADVQIHSLWIWTQHFHQVGCLPSEIKHFEQFAKVPFGETFYVTCEVQSKTESSVVTDVITYNRQGQVYNRMIGAKGTILPRQIAKD
>NZ_CP011456.1|WP_027402676.1|906514_906844_+|hypothetical-protein
MRLSELDPLIPLNELREDLLKLPKGYSFHEDELVDFLSRRRWPESNRRIDRTTFWRWRNDNAIEHQKIFSRLDLLKLCQICDHYRVDGTRSEYLAIMRKKKEKEVVLNK

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Crispr_ID: NZ_CP011456_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011456_6

957056-957166

TypeV

Consensus_repeat	Method
CCTGCGCCCAGAATTCAGAAGGAATCAACAAGATATTTC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP011456_6

>merge|NZ_CP011456|6|957056-957166|CRISPRCasFinder
CCTGCGCCCAGAATTCAGAAGGAATCAACAAGATATTTCATCATCGTATCCCTTCTCCGTAGGGGCGCAGGGCCTGCGCCCAGAATTCAGAAGGAATCAACAAGATATTTC

>NZ_CP011456|6|6|957056-957166|CRISPRCasFinder
CCTGCGCCCAGAATTCAGAAGGAATCAACAAGATATTTC	ATCATCGTATCCCTTCTCCGTAGGGGCGCAGGG
CCTGCGCCCAGAATTCAGAAGGAATCAACAAGATATTTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011456.1\|WP_081424134.1\|945173_947555_-\|penicillin-binding-protein-1A	unknown	unknown	gnl\|CDD\|273955
NZ_CP011456.1\|WP_027404849.1\|964736_966425_+\|potassium-channel-protein	unknown	unknown	gnl\|CDD\|367001
NZ_CP011456.1\|WP_053538024.1\|949277_951788_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP011456.1\|WP_027402642.1\|957491_958568_+\|heat-inducible-transcriptional-repressor-HrcA	unknown	unknown	gnl\|CDD\|234621
NZ_CP011456.1\|WP_053538035.1\|970332_970854_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|379646
NZ_CP011456.1\|WP_053538023.1\|944552_944747_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053538028.1\|958581_959247_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_039202515.1\|959263_959605_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_027402645.1\|953455_954208_-\|serine-O-acetyltransferase	unknown	unknown	gnl\|CDD\|223975
NZ_CP011456.1\|WP_053538030.1\|961993_962824_+\|inositol-monophosphatase	unknown	unknown	gnl\|CDD\|238821
NZ_CP011456.1\|WP_053538027.1\|956675_957035_+\|rhodanese-related-sulfurtransferase	unknown	unknown	gnl\|CDD\|238786
NZ_CP011456.1\|WP_053538025.1\|952013_952310_+\|DnaJ-domain-containing-protein	unknown	unknown	gnl\|CDD\|274090
NZ_CP011456.1\|WP_053538022.1\|943888_944311_+\|TerB-family-tellurite-resistance-protein	unknown	unknown	gnl\|CDD\|143581
NZ_CP011456.1\|WP_053538032.1\|967195_967912_+\|6-phosphogluconolactonase	unknown	unknown	gnl\|CDD\|273494
NZ_CP011456.1\|WP_053538031.1\|962956_963913_+\|alcohol-dehydrogenase-catalytic-domain-containing-protein	unknown	unknown	gnl\|CDD\|176204
NZ_CP011456.1\|WP_053538034.1\|969199_970096_+\|acetylglutamate-kinase	unknown	unknown	gnl\|CDD\|239783
NZ_CP011456.1\|WP_053538033.1\|968074_969055_+\|FHA-domain-containing-protein	unknown	unknown	gnl\|CDD\|224630
NZ_CP011456.1\|WP_081424135.1\|954926_956645_-\|DUF3352-domain-containing-protein	unknown	unknown	gnl\|CDD\|371750
NZ_CP011456.1\|WP_053538026.1\|952462_953221_+\|nucleotide-exchange-factor-GrpE	unknown	unknown	gnl\|CDD\|271355
NZ_CP011456.1\|WP_053537527.1\|947924_948944_+\|transposase	unknown	unknown	gnl\|CDD\|376573

Protein	Function_ID	Function_description	E-value
NZ_CP011456.1\|WP_081424134.1\|945173_947555_-\|penicillin-binding-protein-1A	gnl\|CDD\|273955	TIGR02074, Includes:_Penicillin-insensitive_transglycosylase, penicillin-binding protein, 1A family. Bacterial that synthesize a cell wall of peptidoglycan (murein) generally have several transglycosylases and transpeptidases for the task. This family consists of bifunctional transglycosylase/transpeptidase penicillin-binding proteins (PBP). In the Proteobacteria, this family includes PBP 1A but not the paralogous PBP 1B (TIGR02071). This family also includes related proteins, often designated PBP 1A, from other bacterial lineages. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan].	0
NZ_CP011456.1\|WP_027404849.1\|964736_966425_+\|potassium-channel-protein	gnl\|CDD\|367001	pfam02254, TrkA_N, TrkA-N domain. This domain is found in a wide variety of proteins. These protein include potassium channels, phosphoesterases, and various other transporters. This domain binds to NAD.	3.88832e-19
NZ_CP011456.1\|WP_053538024.1\|949277_951788_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	9.84749e-07
NZ_CP011456.1\|WP_027402642.1\|957491_958568_+\|heat-inducible-transcriptional-repressor-HrcA	gnl\|CDD\|234621	PRK00082, hrcA, heat-inducible transcription repressor; Provisional.	7.22785e-127
NZ_CP011456.1\|WP_053538032.1\|967195_967912_+\|6-phosphogluconolactonase	gnl\|CDD\|273494	TIGR01198, 6-phosphogluconolactonase_6PGL., 6-phosphogluconolactonase. This enzyme of the pentose phosphate pathway is often found as a part of a multifunctional protein with [Energy metabolism, Pentose phosphate pathway].	5.79041e-100
NZ_CP011456.1\|WP_027402645.1\|953455_954208_-\|serine-O-acetyltransferase	gnl\|CDD\|223975	COG1045, CysE, Serine acetyltransferase [Amino acid transport and metabolism].	2.08984e-100
NZ_CP011456.1\|WP_053538030.1\|961993_962824_+\|inositol-monophosphatase	gnl\|CDD\|238821	cd01643, Bacterial_IMPase_like_2, Bacterial family of Mg++ dependent phosphatases, related to inositol monophosphatases. These enzymes may dephosphorylate inositol monophosphate or similar substrates.	1.0421e-105
NZ_CP011456.1\|WP_053538027.1\|956675_957035_+\|rhodanese-related-sulfurtransferase	gnl\|CDD\|238786	cd01528, RHOD_2, Member of the Rhodanese Homology Domain superfamily, subgroup 2. Subgroup 2 includes uncharacterized putative rhodanese-related domains.	1.16818e-40
NZ_CP011456.1\|WP_053538025.1\|952013_952310_+\|DnaJ-domain-containing-protein	gnl\|CDD\|274090	TIGR02349, Chaperone_protein_DnaJ, chaperone protein DnaJ. This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.	1.76782e-07
NZ_CP011456.1\|WP_053538022.1\|943888_944311_+\|TerB-family-tellurite-resistance-protein	gnl\|CDD\|143581	cd07177, terB_like, tellurium resistance terB-like protein. This family consists of tellurium resistance terB proteins, N-terminal domain of heat shock DnaJ-like proteins, N-terminal domain of Mo-dependent nitrogenase-like proteins, C-terminal domain of ABC transporter ATP-binding proteins, C-terminal domain of serine/threonine protein kinase, and many hypothetical bacterial proteins. The function of this family is unknown.	6.32307e-11
NZ_CP011456.1\|WP_053538035.1\|970332_970854_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|379646	pfam14559, TPR_19, Tetratricopeptide repeat.	0.000139143
NZ_CP011456.1\|WP_053538031.1\|962956_963913_+\|alcohol-dehydrogenase-catalytic-domain-containing-protein	gnl\|CDD\|176204	cd08242, MDR_like, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	1.64738e-180
NZ_CP011456.1\|WP_053538034.1\|969199_970096_+\|acetylglutamate-kinase	gnl\|CDD\|239783	cd04250, AAK_NAGK-C, AAK_NAGK-C: N-Acetyl-L-glutamate kinase - cyclic (NAGK-C) catalyzes the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of arginine biosynthesis found in some bacteria and photosynthetic organisms using the non-acetylated, cyclic route of ornithine biosynthesis. In this pathway, glutamate is first N-acetylated and then phosphorylated by NAGK to give phosphoryl NAG, which is converted to NAG-ornithine. There are two variants of this pathway. In one, typified by the pathway in Thermotoga maritima and Pseudomonas aeruginosa, the acetyl group is recycled by reversible transacetylation from acetylornithine to glutamate. The phosphorylation of NAG by NAGK is feedback inhibited by arginine. In photosynthetic organisms, NAGK is the target of the nitrogen-signaling protein PII. Hexameric formation of NAGK domains appears to be essential to both arginine inhibition and NAGK-PII complex formation. NAGK-C are members of the Amino Acid Kinase Superfamily (AAK).	2.43327e-169
NZ_CP011456.1\|WP_053538033.1\|968074_969055_+\|FHA-domain-containing-protein	gnl\|CDD\|224630	COG1716, COG1716, FOG: FHA domain [Signal transduction mechanisms].	6.52558e-20
NZ_CP011456.1\|WP_081424135.1\|954926_956645_-\|DUF3352-domain-containing-protein	gnl\|CDD\|371750	pfam11832, DUF3352, Protein of unknown function (DUF3352). This family of proteins are functionally uncharacterized. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 538 to 575 amino acids in length.	4.04072e-149
NZ_CP011456.1\|WP_053538026.1\|952462_953221_+\|nucleotide-exchange-factor-GrpE	gnl\|CDD\|271355	cd00446, GrpE, nucleotide exchange factor GrpE. GrpE is the adenine nucleotide exchange factor of DnaK (Hsp70)-type ATPases. In bacteria, the DnaK-DnaJ-GrpE (KJE) chaperone system functions at the fulcrum of protein homeostasis. GrpE participates actively in response to heat shock by preventing aggregation of stress-denatured proteins; unfolded proteins initially bind to DnaJ, the J-domain ATPase-activating protein (Hsp40 family), whereupon DnaK hydrolyzes its bound ATP, resulting in a stable complex. The GrpE dimer binds to the ATPase domain of Hsp70 catalyzing the dissociation of ADP, which enables rebinding of ATP, one step in the Hsp70 reaction cycle in protein folding. In eukaryotes, only the mitochondrial Hsp70, not the cytosolic form, is GrpE dependent. Over-expression of Hsp70 molecular chaperones is important in suppressing toxicity of aberrantly folded proteins that occur in Alzheimer's disease (AD), Parkinson's disease (PD), amyotrophic lateral sclerosis, as well as several polyQ-diseases such as Huntington's disease and ataxias.	8.15719e-20
NZ_CP011456.1\|WP_053537527.1\|947924_948944_+\|transposase	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	5.60416e-21

>NZ_CP011456.1|WP_053538027.1|956675_957035_+|rhodanese-related-sulfurtransferase
MTNTSFDQPFSEITVEELAKRLENHEEPLQLIDVREPQEIAISRLDGFVNLPLSEYEQWNQQVPVRFDVHAETLVLCHHGMRSAQMCQWLVTQGFTNVKNITGGISAYSILVDPSVPQY
>NZ_CP011456.1|WP_081424135.1|954926_956645_-|DUF3352-domain-containing-protein
MFAEKLENIKNVNSQHLTKNIKLGFLIAGIITLILVCLAKFSWFSEKSPVSLVVRNSQPAAAIFVSKSSPAMVSLLINPDGLQKIAPKGEFSQLKNRLLAKSNIDYQDDIKPWLGDEITLAVTTIDIDRDPENGLQTGYLMALATAKPGKSRDFLELLFSKRAFSGTNLGIERYKGVKVIYDNTEYSSGVNIQNPISNIQNNLAGAVVNNFVLLANHPQVIKEAINNLQAPDLNLISSLEYQKATQKISKNAVAITFLNLPEVGKWQGLELAESTYNSQILSFVLNSQGLLTESTFFTNSQILPSYLPLSQPVGALQYIPESTALAIAGTNLSKLDNSDVAKLWKQLTASIYGSSKDGTARLLQPLATIQDHWNLNFSADIFNWVTGEYALALLPNSENTTLNWLFVSEKTPGLAAGITHLNNIASRSGFNVSSLTLDQQKISAWTKITATSKNNTSINVDTKVKGVHTTLDNYEIFSSDLKTLKTVLSQKQKSLLENPQFQNSIATIPQPNQGYIYLDWENSQDILKRQLPLLKLAEVLGKPLFDNLKSLTVSSYSSEPGTLKGGVFWQLH
>NZ_CP011456.1|WP_027402645.1|953455_954208_-|serine-O-acetyltransferase
MFSRLRADFRIIFERDPAARNWLEVLFCYPGLQALVFHRFAHWLRRLGLPFFPRLISHIARFLTGVEIHPGATIGKGVFIDHGMGVVIGETAIIGNYALIYQGVTLGGTGKESGKRHPTLGENVVVGAGAKVLGNIEIGDNVRIGAGSVVLRDVPSSCTVVGVPGRIIYRSGVRVAPLEHSNLPDSEAQVIRTLVDRIEALEEQIQALQTPAKTPVLVGKFLPEDELPKEHNFCNIRDKQIQEFFDGAGI
>NZ_CP011456.1|WP_053538026.1|952462_953221_+|nucleotide-exchange-factor-GrpE
MTTDKEALFANFLDYLQSEQLPPEYLGEPPSSAHAFDPYQMVSEWTALRHEVKQQGKLLHSTQDALVQALAVIRTEQEQMPIRLEEIQKQASGKFEQQQEKLLKDLLGIVDALDQACTYWQEELEALSTTSNSKPLIKKGFWEKLLDWINGNYTEFSEPEKLPMSESLTEIFTSNQQGVELIRRSLLEILKQRRIVPIVAQGKPFDSQTMYAVGRKSRADVAENTVIQEVIRGYLWGDRVLREAQVIVATQK
>NZ_CP011456.1|WP_053538025.1|952013_952310_+|DnaJ-domain-containing-protein
MADYYERLGISPGATSAQIKAAYHAKLREFPAHTYPEEFKAIRGAYEALRKGETSQSEEFLKLRPLEAELNPEILKQLREKALAQLEVSLDDLIRATF
>NZ_CP011456.1|WP_053538024.1|949277_951788_+|tetratricopeptide-repeat-protein
MAKHQSKQHSQPQVSSTETKVAENSFQKQLQELLNQKKYRQALEEIKKNQRLHPNIEFTPPESEIWLLRGQQEFQKQDFKQAEKSFARALEFGLVGEVHYWQAKCLLELKQLDAALKLLRNAFEAGTLPKDYSISYLKLLFLKGDTATVEQLIQEQSKRFSANQLHWVRGVLALKNGQPETALTSFQKIKRAVTDGDLPIAWIVYTQQVIGNWDAAASLLGLKSLSYGQPKYLEHPILERLAIFQHGRTEQKPFQFINSRTTVDKNSQQALAILRMLQLIDQGNHHDAAHLLLKMERRSPRFPELESLRPLLLTLAGQQALNQGEPSCAELFWQPLLTEQPFNPQLAINLLEVFDANDHDQERSRLLTRFLKWLEQEAKRNPQEWPAQRLKLTQAHLHCWMADAYIAIDRDRAALGSVQQAERICPTSPEVRGRKGLIEAGGENYDEAIALLTQALENGCRYGEVYQTLLHCWKKLDNKQAFNEARRKFGKHFGDLNLEPEVETLPWIDALSTLSYPLFSRFVETEDPTDPPIRACQIFVNAVQSPPNSGGRVSLDQKAAAQVWDNLLQRLAGEEQISVLQAIALSIQLFAKREKGIAALISQYQQKLINLSIEYPEARVANLIILAVKENGSKKLEIPVRSYLDTMPQPGNAVANIQLQARRFGEIKTLVPFLDEALRREPQNPLLLLARATTYHVDHPNYEQLKQQGFELARRLQDAKALQAFREEQAFVNDRETQSAMPDADEFDNLDMSDMNDLLEGMIKKLFGNKMSPAEFERMLPELKKMMLNNMPDFSDDDDEDEEDEEDGIDLDFIFRNSSPSKKRKGRKKAGFQELL
>NZ_CP011456.1|WP_053537527.1|947924_948944_+|transposase
MRLKNFPEVVKTILKPLPKKDYPVLDTFSFVSVWLQYVMDKSIVSMRDLFQRLNNQGIDLKISNFSKASKKRDTQVFLEIITELNNQLRKKKGKEETQALFPIDSTIITLTSKLLWSQGYHQVKLFCGLDSLTSEVGGMVIHFGQGHDHKYGQETVEAIPSKGVGIMDRGFASSERISELKQQKNKAFVLRIKNNVTLEMLENGNCKVGKDEREVEIRVVAFCDIETKSEFRLATNLLNEGEEQVSNQEIMEIYIQRWQIELLWKFLKMHLKLDRLMTKNENGIRIQIMCCLIAYLILQLIEIPQEFGKTLLDKLRYLQSYMCQEISYVHWFRKLIWIR
>NZ_CP011456.1|WP_081424134.1|945173_947555_-|penicillin-binding-protein-1A
MPLSNHQQNHKSTNEKLLPKMQVNAKQLITQVTTVSSGILTRIASSDKPFYRRFWFWAGLGVSSGIIAFHYTILEIDKNLPDQSALRALVREQTLTIKAADGSVLQQQGEATREQLKIEQIPDTLKKAFIASEDRRFNQHNGFDLQGIARAVINNLRSQNVVEGGSTITQQVARILFLKPEKTFWRKLKEVRLSQKIERELTKDQILERYLNLVYLGSGAYGVGDAAWVYFSKSVDQLTLSEMATLAGLAPAPNVYAPDKNPKTATERRNLVLQRMLEDGIITPAQKQAATEEALIVNSSLPKRLQVDFPYFTTYVHKELPKYVAADVLASGGLIVETTLNPTSQKAAEAAVGKILKNEGRWQNFKQAAMVAIEPGSGEIQAMVGGKDFGKNQFNRVTQAQRQPGSTFKGFVYATAIATGKSPYDSYLDEPLSIDGYEPKNSHNKFSGWLNIRDALTKSINTIAVKVIIEIGFEPTIKLAHDMGIKSELKPNYSLALGSNEVNLLELTNAYGTFANQGNYVESHGIRRILNREGDVIWSAKYKPKQVLDADSSAIMTWMLRNVVTDGTGAAAQLDDRQVAGKTGTTDESRDLWFIGYIPQLVAGVWLGNDDNTPTYGNSGSAAYAWHEFMAEALKGMPVEKFPRRPNLENRKGTIKAQPLKPRKLIYKSVDDNNQKSDEDNTDNSDSSTRRRRRSRRTYNQSDDSSNSEENRPRRRRRYSQENNDTSYSTRRRRRRSQESNGDSPSQSPRSRRSRSQESAPSRSSSENKSPGGSSSSQPSWRERLKPDSSGNN
>NZ_CP011456.1|WP_053538023.1|944552_944747_-|hypothetical-protein
MSYLLLQVQVPDTGNHFPLAFTLVYVVGFVAAITIGSIAWYNSKRPPGWENKERPDIIPKVEKE
>NZ_CP011456.1|WP_053538022.1|943888_944311_+|TerB-family-tellurite-resistance-protein
MVNHSHVKNLVKILIGAAWIDGKIQPEERQYLREIAQVKGLANDPEIKPWLYELVPVKPNECYQWVKEYLGDRPTQEDYEDLIEAISGLIYSDGDVAVEEARLLSQLEELSKSSESHPSIHITLLKQIKKLYRRWVDVQN
>NZ_CP011456.1|WP_027402642.1|957491_958568_+|heat-inducible-transcriptional-repressor-HrcA
MQVHLTNRQQNILYATVRHYITTAEPVGSKALIEGFDLGVSSATIRSVMGVLEKSGLLYQPHTSAGRIPSDSGYRIYVDQLIKPSETLAKEVETVLQKHLHWEDCSLEALLQGAAQILATLSGCITLITMPQPTTAKLRHLQLVQIESERIMLIVVTDSYETHSKVMDLFLHNPESKPEAEVIDHQLQIVSNFLNTHLRGQSLLEIGYLDWSKLDQEFRVYGELLKSSLVELTHRALAPTTTQIMVRGIGEVLRQPEFSQVQQVQTIMQLLEEEQDQLWHLICEEAEMHDMNKSKVTVRIGTENPLEPIRTCTLISAIYRRGSVPVGSVGVLGPTRLDYESAIAVVAAAADYLSEAFS
>NZ_CP011456.1|WP_053538028.1|958581_959247_+|hypothetical-protein
MLRKITFGLLWLGFVSYAFFFAPPEQPDTFELIKNLSTGNWQGINPLIISLFNIMGIWPFIYSAVVFFDGRGQKIPAWPFASGAFALGAFALLPYLALRQPNQKFIGEKNLFLKILDSRILGILLTIGAAVLFASGLQGDWGDFVQQWQSSRFIHVMSLDFVMLSLLFPTLLGDDMARRGGKDNQLFWLFVMPLFGALIYLCVRPPVEIENKIGVEKPIII
>NZ_CP011456.1|WP_039202515.1|959263_959605_-|hypothetical-protein
MRFLMRIAGFGLLILGIYLVGKNIFFTTNVYPYWWRGIAADISVLALTLGVLMLVFFSESMKNLGWIAISVGIMAVFISSRAILSPTSLWQFFLSLICITSGYKMFTTGYSPF
>NZ_CP011456.1|WP_053538030.1|961993_962824_+|inositol-monophosphatase
MNDFWNTILDFAETTTTRVGKQLMQDFGKVQASQKSDGSLVTKSDKWADQEIRDAIVSTFSGYGILSEESDSEELLQAGQTFPNTEWCWVIDPLDGTTNFTRGIPIWSISLGLLYRGTPIFGYVYVPPLNQVFHGFWAGSSGLTTPTGAFLNNHPIHTSKDAPSKNHFFNLCSRSTDIIQPGFPCKIRMLGVASYNFLSVATGAVLGGIEATPKVWDIAGAWVIVQAAGGTWVSLNSESFPLSPGIDYSDRSFPTMVVSNSDIVPIFTPFLENVKF
>NZ_CP011456.1|WP_053538031.1|962956_963913_+|alcohol-dehydrogenase-catalytic-domain-containing-protein
MKGLWLENNQLELRTNIPIPEPPPGEALVRVLRAGICNTDLELIKGYYPYTGIIGHEFVGIVEQAPKQLINQRVVGEINAACGNCRFCRRGQPTHCENRTVLGIVNRNGAFAEYLSLPIENLHLVPENVSTAAATFTEPIAAALEIQQQIQISKDDRVLVVGDGKLGQLIAQTLALTGCELLVVGRHEDKLINLAGKGIKTGLADSLTDRYFDISVDCTGNPEGFNIARRALRPRGTLILKSTYAGNLSLDASSLVVDEITLIGSRCGPFVPALELLATGKVDVQYLIDSSYPLSQGLEAFEKAKTKGVLKVLLEMSS
>NZ_CP011456.1|WP_027404849.1|964736_966425_+|potassium-channel-protein
MKPRIIVCGLGRTGYKIFRLLRQQGALVVGIHRKPVSGEPAANIIVGELHAASTLQAAGITEAHTLVIATSDDALNLSIMMQARVLNPQIRIINRFYNTNLGERLDQTLSNHLSMSVVGLAAPVFTFAALGNKAIGQIKLLEQIWPIQEEYIHENHPWKGRKISDLWEDPTRMLIYYVAVEGKLNLVSAVLLEQQLRVGDRLIIGTQPRIRPQRKSLVRKLVKVFANIREFQKHAQSVVGMAIALFVIILISTFTYFASKHSISFIDALYFAVGMITGAGGNDKVVENAPDSIKLFTIVIMLIGAAVIGIWYAMLTDFILGSRLKQFLDAARIPQHHHYIVCGLSGIGIRIVQQLHLSGHEVVVIETDANNRYVTTARGMSIPVILADASFRATLQASNINTATAVLAVTNNDATNLEIALKAKSLAPKIPVIVNYADPDFAGIAQQVFDFEAVFSPAELAAPAFAAAALGGRIIGNGIIADNLWVAFATTITPIHPFCDEWVKDVAKFADFVPLYVEINHETVQGWDLLETILAPGDVLYLTMPANRLNQLWREEGKGIGV
>NZ_CP011456.1|WP_053538032.1|967195_967912_+|6-phosphogluconolactonase
MNKTVEVHSSVSALVQRALELILSKAETAIGERGQFTIALSGGSTPKPLYEAIANQKLPWDKIHVFWGDERYVPADHPDSNELMARRAWLDQVALPKANIHAIPTLSANPEVDAAKYNQHLQTFFNSASGEFPALDVVLLGMGDDAHTASLFPYTEALKVSDRLVTVGNKDDNLRITFTYPFINAARSVIFMAAGANKRPALAQVFAPVADDFAYPSRLIRPQGELYWLLDAAAGLEL
>NZ_CP011456.1|WP_053538033.1|968074_969055_+|FHA-domain-containing-protein
MIVCPNCNHPNPDGAVQCEACYTPLPATASCPNCGATVQSDAAFCGQCGYNLHFGATLAVASTGAVNPVPAPVVAPDLMMQLLQPDVLEVAPRSNPTVSAPVAPEPEVYIPPVLTPTPAPMAVVQEQAVYVPSVPAPVAPEPEVYIPPVLTPPPAPVAPEPEVYIPSVLTPEPVAMDTVPGSEPYIPPAYVPQIDPISIPEVAPVAPSGKVANTQLQQIVARLFHVQANQEIELPQNLSVVHIGKPNDRVPPDIDVSGFPNSEIVSRIHADIRIEGDACYIEDAGSSNGTYINNLPLLPGNRHRLRPGDRISLGKGDLVTFLFQLS
>NZ_CP011456.1|WP_053538034.1|969199_970096_+|acetylglutamate-kinase
MINDTEYIRQAEANRVEILSEALPYIQQFAGRTVVVKYGGAAMKDSSLKDKVIRDVVFLSCVGLRPILVHGGGPEINSWLGKLGIEAQFKNGLRVTDAPTMDVVEMVLVGRVNKEIVALINQAGGMAVGLCGKDGNLITARPQGDEGIGFVGEVSNVNIKILETLASNGYIPVVSSVAADETGQAYNINADTVAGEIAAALGAEKLILLTDTRGILRDYKDPSTLIPKVDIREARQLIADGIVSGGMIPKVNCCVRSLAQGVKASHIIDGRIPHALLLEVFTDVGIGTMILGSHQSRQ
>NZ_CP011456.1|WP_053538035.1|970332_970854_+|tetratricopeptide-repeat-protein
MTTENLELAKSCFQIGTTAFENGQYRESVESLEKASTLLGKNTRFAGEVEIWLVNAYEAAGRSEEAINLCQQLSRHPHYEIRQQAKRLVYILKAPKLNRPKEWMTEIPDFGIVSDNKSKILVTSQSQKSTSKPKPVEREYIDLSTVNTKDNNFVWVGLISVGLTIFYLVWLSF

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Crispr_ID: NZ_CP011456_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011456_7

968501-968587

Orphan

Consensus_repeat	Method
GAAGTTTATATTCCGCCTGTATTGACTCCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP011456_7

>merge|NZ_CP011456|7|968501-968587|CRISPRCasFinder
GAAGTTTATATTCCGCCTGTATTGACTCCTCCACCTGCACCTGTAGCACCTGAACCGGAAGTTTATATTCCGTCTGTATTGACTCCT

>NZ_CP011456|7|7|968501-968587|CRISPRCasFinder
GAAGTTTATATTCCGCCTGTATTGACTCCT	CCACCTGCACCTGTAGCACCTGAACCG
GAAGTTTATATTCCGTCTGTATTGACTCCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011456.1\|WP_027404849.1\|964736_966425_+\|potassium-channel-protein	unknown	unknown	gnl\|CDD\|367001
NZ_CP011456.1\|WP_053538038.1\|972389_972605_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053541180.1\|976364_976553_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_027402642.1\|957491_958568_+\|heat-inducible-transcriptional-repressor-HrcA	unknown	unknown	gnl\|CDD\|234621
NZ_CP011456.1\|WP_053538028.1\|958581_959247_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_052150075.1\|971804_972179_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_039202515.1\|959263_959605_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_027402645.1\|953455_954208_-\|serine-O-acetyltransferase	unknown	unknown	gnl\|CDD\|223975
NZ_CP011456.1\|WP_053538030.1\|961993_962824_+\|inositol-monophosphatase	unknown	unknown	gnl\|CDD\|238821
NZ_CP011456.1\|WP_053538027.1\|956675_957035_+\|rhodanese-related-sulfurtransferase	unknown	unknown	gnl\|CDD\|238786
NZ_CP011456.1\|WP_053538032.1\|967195_967912_+\|6-phosphogluconolactonase	unknown	unknown	gnl\|CDD\|273494
NZ_CP011456.1\|WP_053538035.1\|970332_970854_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|379646
NZ_CP011456.1\|WP_053538031.1\|962956_963913_+\|alcohol-dehydrogenase-catalytic-domain-containing-protein	unknown	unknown	gnl\|CDD\|176204
NZ_CP011456.1\|WP_053538036.1\|970875_971691_+\|DUF3153-domain-containing-protein	unknown	unknown	gnl\|CDD\|371485
NZ_CP011456.1\|WP_053538034.1\|969199_970096_+\|acetylglutamate-kinase	unknown	unknown	gnl\|CDD\|239783
NZ_CP011456.1\|WP_053538037.1\|972175_972382_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053538040.1\|973680_976311_+\|bifunctional-aconitate-hydratase-2/2-methylisocitrate-dehydratase	unknown	unknown	gnl\|CDD\|236424
NZ_CP011456.1\|WP_053538039.1\|972604_973483_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|365803
NZ_CP011456.1\|WP_081424135.1\|954926_956645_-\|DUF3352-domain-containing-protein	unknown	unknown	gnl\|CDD\|371750
NZ_CP011456.1\|WP_053538041.1\|976552_976801_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP011456.1\|WP_027404849.1\|964736_966425_+\|potassium-channel-protein	gnl\|CDD\|367001	pfam02254, TrkA_N, TrkA-N domain. This domain is found in a wide variety of proteins. These protein include potassium channels, phosphoesterases, and various other transporters. This domain binds to NAD.	3.88832e-19
NZ_CP011456.1\|WP_027402642.1\|957491_958568_+\|heat-inducible-transcriptional-repressor-HrcA	gnl\|CDD\|234621	PRK00082, hrcA, heat-inducible transcription repressor; Provisional.	7.22785e-127
NZ_CP011456.1\|WP_027402645.1\|953455_954208_-\|serine-O-acetyltransferase	gnl\|CDD\|223975	COG1045, CysE, Serine acetyltransferase [Amino acid transport and metabolism].	2.08984e-100
NZ_CP011456.1\|WP_053538030.1\|961993_962824_+\|inositol-monophosphatase	gnl\|CDD\|238821	cd01643, Bacterial_IMPase_like_2, Bacterial family of Mg++ dependent phosphatases, related to inositol monophosphatases. These enzymes may dephosphorylate inositol monophosphate or similar substrates.	1.0421e-105
NZ_CP011456.1\|WP_053538027.1\|956675_957035_+\|rhodanese-related-sulfurtransferase	gnl\|CDD\|238786	cd01528, RHOD_2, Member of the Rhodanese Homology Domain superfamily, subgroup 2. Subgroup 2 includes uncharacterized putative rhodanese-related domains.	1.16818e-40
NZ_CP011456.1\|WP_053538032.1\|967195_967912_+\|6-phosphogluconolactonase	gnl\|CDD\|273494	TIGR01198, 6-phosphogluconolactonase_6PGL., 6-phosphogluconolactonase. This enzyme of the pentose phosphate pathway is often found as a part of a multifunctional protein with [Energy metabolism, Pentose phosphate pathway].	5.79041e-100
NZ_CP011456.1\|WP_053538035.1\|970332_970854_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|379646	pfam14559, TPR_19, Tetratricopeptide repeat.	0.000139143
NZ_CP011456.1\|WP_053538031.1\|962956_963913_+\|alcohol-dehydrogenase-catalytic-domain-containing-protein	gnl\|CDD\|176204	cd08242, MDR_like, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	1.64738e-180
NZ_CP011456.1\|WP_053538036.1\|970875_971691_+\|DUF3153-domain-containing-protein	gnl\|CDD\|371485	pfam11353, DUF3153, Protein of unknown function (DUF3153). This family of proteins with unknown function appear to be restricted to Cyanobacteria. Some members are annotated as membrane proteins however this cannot be confirmed.	3.99743e-31
NZ_CP011456.1\|WP_053538034.1\|969199_970096_+\|acetylglutamate-kinase	gnl\|CDD\|239783	cd04250, AAK_NAGK-C, AAK_NAGK-C: N-Acetyl-L-glutamate kinase - cyclic (NAGK-C) catalyzes the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of arginine biosynthesis found in some bacteria and photosynthetic organisms using the non-acetylated, cyclic route of ornithine biosynthesis. In this pathway, glutamate is first N-acetylated and then phosphorylated by NAGK to give phosphoryl NAG, which is converted to NAG-ornithine. There are two variants of this pathway. In one, typified by the pathway in Thermotoga maritima and Pseudomonas aeruginosa, the acetyl group is recycled by reversible transacetylation from acetylornithine to glutamate. The phosphorylation of NAG by NAGK is feedback inhibited by arginine. In photosynthetic organisms, NAGK is the target of the nitrogen-signaling protein PII. Hexameric formation of NAGK domains appears to be essential to both arginine inhibition and NAGK-PII complex formation. NAGK-C are members of the Amino Acid Kinase Superfamily (AAK).	2.43327e-169
NZ_CP011456.1\|WP_053538040.1\|973680_976311_+\|bifunctional-aconitate-hydratase-2/2-methylisocitrate-dehydratase	gnl\|CDD\|236424	PRK09238, PRK09238, bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Validated.	0
NZ_CP011456.1\|WP_053538039.1\|972604_973483_-\|AAA-family-ATPase	gnl\|CDD\|365803	pfam00004, AAA, ATPase family associated with various cellular activities (AAA). AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes.	7.80695e-22
NZ_CP011456.1\|WP_081424135.1\|954926_956645_-\|DUF3352-domain-containing-protein	gnl\|CDD\|371750	pfam11832, DUF3352, Protein of unknown function (DUF3352). This family of proteins are functionally uncharacterized. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 538 to 575 amino acids in length.	4.04072e-149

>NZ_CP011456.1|WP_053538032.1|967195_967912_+|6-phosphogluconolactonase
MNKTVEVHSSVSALVQRALELILSKAETAIGERGQFTIALSGGSTPKPLYEAIANQKLPWDKIHVFWGDERYVPADHPDSNELMARRAWLDQVALPKANIHAIPTLSANPEVDAAKYNQHLQTFFNSASGEFPALDVVLLGMGDDAHTASLFPYTEALKVSDRLVTVGNKDDNLRITFTYPFINAARSVIFMAAGANKRPALAQVFAPVADDFAYPSRLIRPQGELYWLLDAAAGLEL
>NZ_CP011456.1|WP_027404849.1|964736_966425_+|potassium-channel-protein
MKPRIIVCGLGRTGYKIFRLLRQQGALVVGIHRKPVSGEPAANIIVGELHAASTLQAAGITEAHTLVIATSDDALNLSIMMQARVLNPQIRIINRFYNTNLGERLDQTLSNHLSMSVVGLAAPVFTFAALGNKAIGQIKLLEQIWPIQEEYIHENHPWKGRKISDLWEDPTRMLIYYVAVEGKLNLVSAVLLEQQLRVGDRLIIGTQPRIRPQRKSLVRKLVKVFANIREFQKHAQSVVGMAIALFVIILISTFTYFASKHSISFIDALYFAVGMITGAGGNDKVVENAPDSIKLFTIVIMLIGAAVIGIWYAMLTDFILGSRLKQFLDAARIPQHHHYIVCGLSGIGIRIVQQLHLSGHEVVVIETDANNRYVTTARGMSIPVILADASFRATLQASNINTATAVLAVTNNDATNLEIALKAKSLAPKIPVIVNYADPDFAGIAQQVFDFEAVFSPAELAAPAFAAAALGGRIIGNGIIADNLWVAFATTITPIHPFCDEWVKDVAKFADFVPLYVEINHETVQGWDLLETILAPGDVLYLTMPANRLNQLWREEGKGIGV
>NZ_CP011456.1|WP_053538031.1|962956_963913_+|alcohol-dehydrogenase-catalytic-domain-containing-protein
MKGLWLENNQLELRTNIPIPEPPPGEALVRVLRAGICNTDLELIKGYYPYTGIIGHEFVGIVEQAPKQLINQRVVGEINAACGNCRFCRRGQPTHCENRTVLGIVNRNGAFAEYLSLPIENLHLVPENVSTAAATFTEPIAAALEIQQQIQISKDDRVLVVGDGKLGQLIAQTLALTGCELLVVGRHEDKLINLAGKGIKTGLADSLTDRYFDISVDCTGNPEGFNIARRALRPRGTLILKSTYAGNLSLDASSLVVDEITLIGSRCGPFVPALELLATGKVDVQYLIDSSYPLSQGLEAFEKAKTKGVLKVLLEMSS
>NZ_CP011456.1|WP_053538030.1|961993_962824_+|inositol-monophosphatase
MNDFWNTILDFAETTTTRVGKQLMQDFGKVQASQKSDGSLVTKSDKWADQEIRDAIVSTFSGYGILSEESDSEELLQAGQTFPNTEWCWVIDPLDGTTNFTRGIPIWSISLGLLYRGTPIFGYVYVPPLNQVFHGFWAGSSGLTTPTGAFLNNHPIHTSKDAPSKNHFFNLCSRSTDIIQPGFPCKIRMLGVASYNFLSVATGAVLGGIEATPKVWDIAGAWVIVQAAGGTWVSLNSESFPLSPGIDYSDRSFPTMVVSNSDIVPIFTPFLENVKF
>NZ_CP011456.1|WP_039202515.1|959263_959605_-|hypothetical-protein
MRFLMRIAGFGLLILGIYLVGKNIFFTTNVYPYWWRGIAADISVLALTLGVLMLVFFSESMKNLGWIAISVGIMAVFISSRAILSPTSLWQFFLSLICITSGYKMFTTGYSPF
>NZ_CP011456.1|WP_053538028.1|958581_959247_+|hypothetical-protein
MLRKITFGLLWLGFVSYAFFFAPPEQPDTFELIKNLSTGNWQGINPLIISLFNIMGIWPFIYSAVVFFDGRGQKIPAWPFASGAFALGAFALLPYLALRQPNQKFIGEKNLFLKILDSRILGILLTIGAAVLFASGLQGDWGDFVQQWQSSRFIHVMSLDFVMLSLLFPTLLGDDMARRGGKDNQLFWLFVMPLFGALIYLCVRPPVEIENKIGVEKPIII
>NZ_CP011456.1|WP_027402642.1|957491_958568_+|heat-inducible-transcriptional-repressor-HrcA
MQVHLTNRQQNILYATVRHYITTAEPVGSKALIEGFDLGVSSATIRSVMGVLEKSGLLYQPHTSAGRIPSDSGYRIYVDQLIKPSETLAKEVETVLQKHLHWEDCSLEALLQGAAQILATLSGCITLITMPQPTTAKLRHLQLVQIESERIMLIVVTDSYETHSKVMDLFLHNPESKPEAEVIDHQLQIVSNFLNTHLRGQSLLEIGYLDWSKLDQEFRVYGELLKSSLVELTHRALAPTTTQIMVRGIGEVLRQPEFSQVQQVQTIMQLLEEEQDQLWHLICEEAEMHDMNKSKVTVRIGTENPLEPIRTCTLISAIYRRGSVPVGSVGVLGPTRLDYESAIAVVAAAADYLSEAFS
>NZ_CP011456.1|WP_053538027.1|956675_957035_+|rhodanese-related-sulfurtransferase
MTNTSFDQPFSEITVEELAKRLENHEEPLQLIDVREPQEIAISRLDGFVNLPLSEYEQWNQQVPVRFDVHAETLVLCHHGMRSAQMCQWLVTQGFTNVKNITGGISAYSILVDPSVPQY
>NZ_CP011456.1|WP_081424135.1|954926_956645_-|DUF3352-domain-containing-protein
MFAEKLENIKNVNSQHLTKNIKLGFLIAGIITLILVCLAKFSWFSEKSPVSLVVRNSQPAAAIFVSKSSPAMVSLLINPDGLQKIAPKGEFSQLKNRLLAKSNIDYQDDIKPWLGDEITLAVTTIDIDRDPENGLQTGYLMALATAKPGKSRDFLELLFSKRAFSGTNLGIERYKGVKVIYDNTEYSSGVNIQNPISNIQNNLAGAVVNNFVLLANHPQVIKEAINNLQAPDLNLISSLEYQKATQKISKNAVAITFLNLPEVGKWQGLELAESTYNSQILSFVLNSQGLLTESTFFTNSQILPSYLPLSQPVGALQYIPESTALAIAGTNLSKLDNSDVAKLWKQLTASIYGSSKDGTARLLQPLATIQDHWNLNFSADIFNWVTGEYALALLPNSENTTLNWLFVSEKTPGLAAGITHLNNIASRSGFNVSSLTLDQQKISAWTKITATSKNNTSINVDTKVKGVHTTLDNYEIFSSDLKTLKTVLSQKQKSLLENPQFQNSIATIPQPNQGYIYLDWENSQDILKRQLPLLKLAEVLGKPLFDNLKSLTVSSYSSEPGTLKGGVFWQLH
>NZ_CP011456.1|WP_027402645.1|953455_954208_-|serine-O-acetyltransferase
MFSRLRADFRIIFERDPAARNWLEVLFCYPGLQALVFHRFAHWLRRLGLPFFPRLISHIARFLTGVEIHPGATIGKGVFIDHGMGVVIGETAIIGNYALIYQGVTLGGTGKESGKRHPTLGENVVVGAGAKVLGNIEIGDNVRIGAGSVVLRDVPSSCTVVGVPGRIIYRSGVRVAPLEHSNLPDSEAQVIRTLVDRIEALEEQIQALQTPAKTPVLVGKFLPEDELPKEHNFCNIRDKQIQEFFDGAGI
>NZ_CP011456.1|WP_053538034.1|969199_970096_+|acetylglutamate-kinase
MINDTEYIRQAEANRVEILSEALPYIQQFAGRTVVVKYGGAAMKDSSLKDKVIRDVVFLSCVGLRPILVHGGGPEINSWLGKLGIEAQFKNGLRVTDAPTMDVVEMVLVGRVNKEIVALINQAGGMAVGLCGKDGNLITARPQGDEGIGFVGEVSNVNIKILETLASNGYIPVVSSVAADETGQAYNINADTVAGEIAAALGAEKLILLTDTRGILRDYKDPSTLIPKVDIREARQLIADGIVSGGMIPKVNCCVRSLAQGVKASHIIDGRIPHALLLEVFTDVGIGTMILGSHQSRQ
>NZ_CP011456.1|WP_053538035.1|970332_970854_+|tetratricopeptide-repeat-protein
MTTENLELAKSCFQIGTTAFENGQYRESVESLEKASTLLGKNTRFAGEVEIWLVNAYEAAGRSEEAINLCQQLSRHPHYEIRQQAKRLVYILKAPKLNRPKEWMTEIPDFGIVSDNKSKILVTSQSQKSTSKPKPVEREYIDLSTVNTKDNNFVWVGLISVGLTIFYLVWLSF
>NZ_CP011456.1|WP_053538036.1|970875_971691_+|DUF3153-domain-containing-protein
MNVLTFIKIISHSMKSVFFSINKIRKITKIKPIVLMVILSSLLLSGCVKYDLGVNFNSTNNGELVQHIQLSEKITIFSGDYLSEWLKTLENRARTLAGSTERVSASEIIVKIPFTSAKELQEKFTGFFNTRTSEDRDGSELANITSTLVAEDRNFFLFSRNHLVYDLDLRSLAMLTTKGDSSLVNLDFSLQTPWGIKNIENDENAIQPEKHGNQLIWKLKAGDINHVEVVFWLPNFLGIGTLLIIGFVWLGLYLRYTLLPSPGIQLTAEEL
>NZ_CP011456.1|WP_052150075.1|971804_972179_-|hypothetical-protein
MMLDITFYGKNGVSPATIEFSNKFYETLIKSDFAEIGKVRELEIVIDEEKSKIEAIDLEKGTITNRQRLIDFLKESIVQESLNMLEKLGDSPSKQEYKETTSTLRIFQEILKCLKNREYCYLTY
>NZ_CP011456.1|WP_053538037.1|972175_972382_-|hypothetical-protein
MPYIEVKSRKIIDSTLAKKIITKGDIIAVLTTGHITKQAKVAFDQADIAWAEYIEERQFLESEAQEVE
>NZ_CP011456.1|WP_053538038.1|972389_972605_-|hypothetical-protein
MSDKTDEDKKIERLIIHKNLIGWLINKLQKEGIECQRTTGDDPDGDILLLNSEDVPRVKEIVRQIQKDYNS
>NZ_CP011456.1|WP_053538039.1|972604_973483_-|AAA-family-ATPase
MSNGLKQLTSAEIEQRINHQKLFGIDDLFEYLFKFCKICLTADESQIDDFSHYDLTPSVLLYGVPNTGKTTLCYSLFYKLKQEVTNEINFYSLDVGRMLDPSLGQSSRNLEDIFDDLKSKCKNGSSVFLLLDELDTFCMSRSRTQEHDAIRRAMTTFMLELDQLHPSKDNKLLIFGITNVPELIDTAVFRRFSLKKEMQPKLDLYSFEKYLKDLGSTIKYFPSVEIINKLYNFYQERNLTAGDVKTFYKEIYIDYLCQRMEESLIQKKVLELFEKGFSTWEHLLTAKKELLR
>NZ_CP011456.1|WP_053538040.1|973680_976311_+|bifunctional-aconitate-hydratase-2/2-methylisocitrate-dehydratase
MLQEYRQQVAERAQLGIPPLPLDAVQTSALCELLKNPPTGEEELLLNLLRDRIPPGVDQAAYVKAGFLTAIAKKEITSPLVSPVDAVELLGTMIGGYNVQSLIDLLQVSSTSVSTASETPLVMGGEGREQIAAYAANALSKIMLVYDAFHDVLELSKTNPYAKQVINSWAEAEWFTSRPTLPEFITVTVFKVPGETNTDDLSPATHATTRPDIPLHALAMLETRQPGSLETIAELKKKGHPVAYVGDVVGTGSSRKSAINSVLWHLGNDIPFVPNKRAGGYILGSAIAPIFFNTAEDAGALPIQCDVSKMETGDVITIYPYKGTILNAAGEVISTFSLKPDTILDEVRAGGRIPLLIGRTLTDKTRQALGLKPSDLFIRPQSPTDTGKGFTLAQKMVGKAAGLPGVRPGTSCEPIMTTVGSQDTTGPMTRDELKELACLGFSADLVMQSFCHTAAYPKPVDIKTHQELPDFISSRGGVALRPGDGIIHSWLNRMLLPDTVGTGGDSHTRFPLGISFPAGSGLVAFAGALGVMPLDMPESVLVRFTGELQPGITLRDVVNAIPYVAMQKGLLTVEKQNKKNVFSGKILEIEGLPNLKVEQAFELTDASAERSCAGCTIKLSEETIAEYLRSNIALLTNMVARGYSDARTIMRRVAKMQEWLDHPVLLSADPDAEYAEIIEIDLSQITEPIVAAPNDPDNVKLLSAVANDPVQEVFVGSCMTNIGHYRATAKVLEGAGEVKARLWIAPPTRMDEHQLKVEGVYDVFVGANARTEIPGCSLCMGNQARVDDNTTVFSTSTRNFNNRMGKGAQVYLGSAELAAVCALLGRLPNVQEYLDIVAERIHPFADDLYRYLNFDQIVGFENEGRVISKEEQAALV
>NZ_CP011456.1|WP_053541180.1|976364_976553_+|hypothetical-protein
MGKSHFKKAISSLESRIAEHKEKIRLELEKDFPDPGLINHWEKEIIAFEQGIKQALKRLGKN
>NZ_CP011456.1|WP_053538041.1|976552_976801_+|hypothetical-protein
MTLAKLKITSENSTLNQLLMELQEECQNVISLVNQLQLSELSDRQKGKILSELLVASIHLHSHCDEDWQNLISDELETLADD

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Crispr_ID: NZ_CP011456_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011456_8

1269408-1269496

Orphan

Consensus_repeat	Method
GGCGACCCCGCCAACCAAGGCAACTTTGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP011456_8

>merge|NZ_CP011456|8|1269408-1269496|CRISPRCasFinder
GGCGACCCCGCCAACCAAGGCAACTTTGGTAATGTTCGTCCCGCCAGTGAAGACCCATACGGCGACCCCGCCGACCAAGGCAACTTTGG

>NZ_CP011456|8|8|1269408-1269496|CRISPRCasFinder
GGCGACCCCGCCAACCAAGGCAACTTTGG	TAATGTTCGTCCCGCCAGTGAAGACCCATAC
GGCGACCCCGCCGACCAAGGCAACTTTGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011456.1\|WP_053538255.1\|1261986_1262451_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379228
NZ_CP011456.1\|WP_053538266.1\|1273685_1274888_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|223541
NZ_CP011456.1\|WP_053538257.1\|1265066_1265429_+\|aspartyl-protease	unknown	unknown	gnl\|CDD\|227837
NZ_CP011456.1\|WP_053538259.1\|1266948_1267956_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237537
NZ_CP011456.1\|WP_053538256.1\|1262416_1263325_-\|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_CP011456.1\|WP_081424154.1\|1276929_1278618_+\|IS1634-family-transposase	unknown	unknown	gnl\|CDD\|379471
NZ_CP011456.1\|WP_027401856.1\|1269658_1269874_-\|NAD(P)H-quinone-oxidoreductase-subunit-O	unknown	unknown	gnl\|CDD\|371791
NZ_CP011456.1\|WP_053541195.1\|1263314_1263899_-\|L-threonylcarbamoyladenylate-synthase	unknown	unknown	gnl\|CDD\|223088
NZ_CP011456.1\|WP_027401848.1\|1263981_1264299_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|176108
NZ_CP011456.1\|WP_053538268.1\|1278976_1279348_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053538258.1\|1265628_1266930_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053538264.1\|1271479_1271692_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_039204224.1\|1264752_1265070_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_081424153.1\|1271777_1272998_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|213815
NZ_CP011456.1\|WP_081424155.1\|1278769_1278958_+\|C4-dicarboxylate-ABC-transporter	unknown	unknown	unknown
NZ_CP011456.1\|WP_053538263.1\|1270743_1271001_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_039204234.1\|1268766_1269252_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053538269.1\|1279852_1280419_+\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|368559
NZ_CP011456.1\|WP_053538260.1\|1268058_1268364_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053538267.1\|1274968_1276267_+\|tyrosine-transporter	unknown	unknown	gnl\|CDD\|367404

Protein	Function_ID	Function_description	E-value
NZ_CP011456.1\|WP_053538255.1\|1261986_1262451_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379228	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	3.21382e-15
NZ_CP011456.1\|WP_053538266.1\|1273685_1274888_+\|AAA-family-ATPase	gnl\|CDD\|223541	COG0465, HflB, ATP-dependent Zn proteases [Posttranslational modification, protein turnover, chaperones].	8.93381e-28
NZ_CP011456.1\|WP_053538257.1\|1265066_1265429_+\|aspartyl-protease	gnl\|CDD\|227837	COG5550, COG5550, Predicted aspartyl protease [Posttranslational modification, protein turnover, chaperones].	3.30178e-17
NZ_CP011456.1\|WP_053538259.1\|1266948_1267956_-\|hypothetical-protein	gnl\|CDD\|237537	PRK13875, PRK13875, conjugal transfer protein TrbL; Provisional.	8.71515e-06
NZ_CP011456.1\|WP_053538256.1\|1262416_1263325_-\|HAMP-domain-containing-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	2.03263e-22
NZ_CP011456.1\|WP_027401856.1\|1269658_1269874_-\|NAD(P)H-quinone-oxidoreductase-subunit-O	gnl\|CDD\|371791	pfam11910, NdhO, Cyanobacterial and plant NDH-1 subunit O. The proton-pumping NADH:ubiquinone oxidoreductase catalyzes the electron transfer from NADH to ubiquinone linked with proton translocation across the membrane. It is the largest, most complex and least understood of the respiratory chain enzymes and is referred to as Complex I. The subunit composition of the enzyme varies between groups of organisms. Complex I originating from mammalian mitochondria contains 45 different proteins, whereas in bacteria, the corresponding complex NDH-1 consists of 14 different polypeptides. homologs of these 14 proteins are found among subunits of the mitochondrial complex I, and therefore bacterial NDH-1 might be considered a model proton-pumping NADH dehydrogenase with a minimal set of subunits. Escherichia coli NDH-1 readily disintegrates into 3 subcomplexes: a water-soluble NADH dehydrogenase fragment (NuoE, -F, and -G),the connecting fragment (NuoB, -C, -D, and -I), and the membrane fragment (NuoA, -H, -J, -K, -L, -M, -N). In cyanobacteria and their descendants, the chloroplasts of green plants, the subunit composition of NDH-1 remains obscure. The genes for eleven subunits NdhA-NdhK, homologous to the NuoA-NuoD and NuoH-NuoN of the E. coli complex, have been found in the genome of Synechocystis sp. PCC 6803 which has a family of 6 ndhD genes and a family of 3 ndhF genes. Two reported multisubunit complexes, NDH-1L and NDH-1M, represent distinct NDH-1 complexes in the thylakoid membrane of Synechocystis 6803 -cyanobacterium. NDH-1L was shown to be essential for photoheterotrophic cell growth, whereas expression of NDH-1M was a prerequisite for CO2 uptake and played an important role in growth of cells at low CO2. Here we report the subunit composition of these two complexes. Fifteen proteins were discovered in NDH-1L including NdhL, a new component of the membrane fragment, and Ssl1690 (designated as NdhO), a novel peripheral subunit. The three nuclear-encoded subunits NdhM,NdhN and NdhO are vital for the functional integrity of the plastidial complex.	2.39064e-39
NZ_CP011456.1\|WP_053541195.1\|1263314_1263899_-\|L-threonylcarbamoyladenylate-synthase	gnl\|CDD\|223088	COG0009, SUA5, Putative translation factor (SUA5) [Translation, ribosomal structure and biogenesis].	6.141e-57
NZ_CP011456.1\|WP_027401848.1\|1263981_1264299_+\|hypothetical-protein	gnl\|CDD\|176108	cd08416, PBP2_MdcR, The C-terminal substrate-binding domian of LysR-type transcriptional regulator MdcR, which involved in the malonate catabolism contains the type 2 periplasmic binding fold. This family includes the C-terminal substrate binding domain of LysR-type transcriptional regulator (LTTR) MdcR that controls the expression of the malonate decarboxylase (mdc) genes. Like other members of the LTTRs, MdcR is a positive regulatory protein for its target promoter and composed of two functional domains joined by a linker helix involved in oligomerization: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal substrate-binding domain, which is structurally homologous to the type 2 periplasmic binding proteins (PBP2). The PBP2 are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the substrate- binding domains from ionotropic glutamate receptors, LysR-like transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	0.00746044
NZ_CP011456.1\|WP_053538269.1\|1279852_1280419_+\|Uma2-family-endonuclease	gnl\|CDD\|368559	pfam05685, Uma2, Putative restriction endonuclease. This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. A small number of member proteins also contain pfam02861 domains that are involved in protein interactions. Solutions of several structures for members of this family show that it is likely to be acting as an endonuclease.	2.71865e-28
NZ_CP011456.1\|WP_081424154.1\|1276929_1278618_+\|IS1634-family-transposase	gnl\|CDD\|379471	pfam14104, DUF4277, Domain of unknown function (DUF4277). This presumed domain is functionally uncharacterized. This domain family is found in bacteria and archaea, and is approximately 110 amino acids in length. There is a conserved NGLGF sequence motif.	5.73651e-52
NZ_CP011456.1\|WP_081424153.1\|1271777_1272998_-\|glycosyltransferase	gnl\|CDD\|213815	TIGR03469, HpnB, hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.	1.14178e-30
NZ_CP011456.1\|WP_053538267.1\|1274968_1276267_+\|tyrosine-transporter	gnl\|CDD\|367404	pfam03222, Trp_Tyr_perm, Tryptophan/tyrosine permease family.	4.42727e-63

>NZ_CP011456.1|WP_039204234.1|1268766_1269252_+|hypothetical-protein
MKTIYKERKLGLRVQAILMSTLLSVLLLTGCGGGSRNASVPPPVDDTAGRNMSDRSLVNQPEAKKGLSTGQKVALLGGAAALYYLYNKQKNAQGTGAKGKYYLSKNGRVYYRDEQNRAHWVTPPPDGIRVPESEAQKYSEFQGYNGRTTGRDLTQLPEATQ
>NZ_CP011456.1|WP_053538260.1|1268058_1268364_-|hypothetical-protein
MNTQAKNLQVLYAKTRLLLALWDLGGSQQKVARGKLNDKMKLKNKNIPGYPEILQELEQEGAIALSKKGSSTSYTLTSPIGLDVLGAGLRSEDNLYKLVSM
>NZ_CP011456.1|WP_053538259.1|1266948_1267956_-|hypothetical-protein
MKEFGLTLEQTRIMFSYQYHLVLADVEYENNFETKALKRQWLSQWKESTELFLQGQINQENHSNSSSNLITDFELLKQLVTAIKTDAGNKLTLHIMFLEVVIFKPYYNLGNTNDDKYKNIKISDEYKLINKLQVFARSLDLDSDVVRRFKSNYNEAIQGIKGGLNPWLVGVLGAVALAITAAFFTPVIAGLLAPILAPGLSGAAAVSAVLAALGGGAIAAGGLGMAGGFAVIVGGGAILGAGAGVGVGALFAQSPDAALTQAAKLEVVMKEIVLIQKDIRLAQEIIKEQRQAIRSLEDERDDLILNKEQNKQKIENLEKAIEYLKNALHRNQDLL
>NZ_CP011456.1|WP_053538258.1|1265628_1266930_-|hypothetical-protein
MSSILNWDNEFLEMSQRIRDIHSSFATINQTQKQETEKLTQLQNDVINLAKDIGVSEDIIRHILDTNLQPSKSQRQLIWEDEIFLNNNFLIIDDRVKEEVFRNPEFLPPLSNLDYAIVGISGLVANILDFLVVKIPKDINYLGKYKQEGSNFTKWLKTLGIDEEGELNPFLKWCEDTCKVSYDQSINQNIKGFNPKTHRLLSLGHDPLFGLIFGTLDIINGNMTAFDINGNLHILKTFDMSLEDKAFAPLIWLGHIISDMSTKMGVPIPGWAFLQLMQFGFYGSDTKTIADISRWMYLNGYDLRHFITMSVPVTVIEIIVRGYHYLSCLDSAEQLQYSLHTSIANRELYQIKSNLKLHKMLFLAHAISASGNALKIFTYAGNPLAINLPQWLFFAKESLTILQAVTRDTTPEKIVRNRDKINDAWDEIKNINI
>NZ_CP011456.1|WP_053538257.1|1265066_1265429_+|aspartyl-protease
MIEGKFGEKKQLFFEIELVANDGLSLPVDALFDSGFTGFMAINTQDLDGLNWDYVDKEILRTAQGEITFERYLGKVILDNQEYEIPVYAGDELTEILLGSEWLEFLPLVVNFQAGILTLG
>NZ_CP011456.1|WP_039204224.1|1264752_1265070_+|hypothetical-protein
MTQLTPKQPARRGRIFPELTLSPEELARRKAENEAEYQRYRTIFERVRPELIKEHYGWYIAIELNSGDYLIDQDKEIAHQKARDKYPNADHCVFCLNESGATGRI
>NZ_CP011456.1|WP_027401848.1|1263981_1264299_+|hypothetical-protein
MTQLTPKQPARRGRIFPELTLSPEELAKRKAEDEQFYQRCWAIFQRLLPELMKEHYNSYIAVEPDSGDYFIDQDMEVASKKSREKHPNVIHFLFRINETGVTGRI
>NZ_CP011456.1|WP_053541195.1|1263314_1263899_-|L-threonylcarbamoyladenylate-synthase
MNLSLSVLIEAAKAGKLISFPTDTVPALATIPVQAELIYAAKQRSFDKPLILMAAKAEDLWDYVQGSQREYQIWQKIVNQYWPGALTLVLPASDKIPTVMNPLEPTTIGIRVPNHPVAQIILAQTGPMATTSANLSGQPALETKAAIEAQFPEVLTLESTEYQGLGIPSTVAKWTGNNWQILRQGSIKLDNYEF
>NZ_CP011456.1|WP_053538256.1|1262416_1263325_-|HAMP-domain-containing-histidine-kinase
MNFSNWLYLGAGIGLGIGFCKLFLQSSKSASVTVENAPQQPENPLLAELEQTQLAYYQAREMSQFQGGFLARIGHELRSPLGSMMGLHQLILADLCENPQEEREFIGQAYEKSLKLLKIIDEILNVSKIESGRNKLDIQAFQLSEFLQEVYELTYLLAVNRNYPFILSPSDPEIQILTDYHWLKQVLINLINTTIANMEEGNIYLSGNLQSPGNFANIWLDVPTDTVITNESLHLMKSELQTTQENIDLSPGMKLSLNQRLVELMGGKLEILPFPTNQEETSQLTRLQISIPTGTLANKSPH
>NZ_CP011456.1|WP_053538255.1|1261986_1262451_+|GNAT-family-N-acetyltransferase
MKYSQIQFSQSLADIDLFQLQELFNLAAFWAKGRSIKDWGIALANSEPVISIWDRELLIGFARATSDGIYRATIWDVVIHPDYQGNGLGSKLVETVLSHPRMQKVERVYLMTTHQREFYEKIGFRVNNTTTMVLNNQSNFDAFVSEEICLQESL
>NZ_CP011456.1|WP_027401856.1|1269658_1269874_-|NAD(P)H-quinone-oxidoreductase-subunit-O
MAIKKGNMVRAIREKLENSLEAQASDSRLPSYLFETQGEIVDIKGDYALVKFGQVPTPNIWLKLSQLEEFA
>NZ_CP011456.1|WP_053538263.1|1270743_1271001_-|hypothetical-protein
MKTSITINPAYEEIINFLAAGITSQSLVKFQVSETVKERVSDLIFREKTDGISPEEKSELDHYLILEHLLRLAKARAYDFINEKA
>NZ_CP011456.1|WP_053538264.1|1271479_1271692_-|hypothetical-protein
MVLRDFQLKKYPKISCGAGILRQAQYKSCPLIIKDGQDAHPTKLGNLFFGVPLKNTGYFDTLRSKDAEIL
>NZ_CP011456.1|WP_081424153.1|1271777_1272998_-|glycosyltransferase
MARRFKVASLYKKSGLKLLNIIPLLLLLVQVPATAILLSRLLKGPRRDPALTPQQPTPEILGSVSVVVPTLNEALRIGPLLAGLTRQSYEVREVIVVDSRSQDGTPDLVKAAAATDPRFRVMTDDPLPSGWVGRPWALHNGFLFSSEGSEWFLGMDADIQPDAGLVASLVQTAIAKGYDLVSLSPQFILKYPGECWLQPALLMTLLYRFDPTGIYTEQPERVMANGQCFLCRRSVLKAVDGYSSAKGSFCDDVTLARNIAAKGFKVGFLDGAKVLRVRMYEGAWETWNEWGRSLDLKDAASPAQIWGDLWVLSAVQGLPILILLGYLSLPSLVLSLPALLLLGLNIFLVVIRFALLLAIAPSYDRKDATGGWLFWLSPLADPLAVLRIFLSAFHTPKQWRGRKYGD
>NZ_CP011456.1|WP_053538266.1|1273685_1274888_+|AAA-family-ATPase
MDFDYFRTNESNNTNKNFQHLLSSGWRPFHRDFDWEYFGKILFHDTQELTQKSINLASYYADALARKEYAWWANILNLASDYTRGEFQKYWNYITPDMLTPEQRHKDFLTTETPLVQFVSRNSIPIDYVLNLLQEITVLRVLKLLERPDVITQYYSERDFYFPVEKFVNWERLDVVNTVYAYWSEHDIWLQIEAYERGRRNYTLMAKNIKPLINKATYDLAVMLSGYQSRVGKVHSQYSLPTFPQDIQDFTDIVQQTILDQNQLAVVVHGAPGTGKTAWTQSVAKEILVPLGYVIFILDHDAITNFVPPTYLEKICIIINEADNLAQDRASEVAQYNNKTEHILALLDGTLYQSIIDESGIQMQQKLVILMTCNTTERLDPAMLRKGRVDLICEFTKKFV
>NZ_CP011456.1|WP_053538267.1|1274968_1276267_+|tyrosine-transporter
MNKKEQTVTRLFSHLKFDNHKFQHQPGSVLGNTALIVGTTIGAGIIGLPAVTLPSGIIPSTILLITVWLYTLTSGLLIAELTLNVMRFEGISHIGLLAIIEKILGKPGARIAGIAYVFNHYALLVAYMTEGGKILTTTVDKVWELEHISPQWVGTVSFFLVFGSLMYWGKDRLIERINGIFIIILLITFLGLLILGGMQFQNSQLLVQNWQSIGNAIAIIYVAMFFHSIIPLVVTQLEGDINKIRQSMIIGSLIPLFMFLAWNAVILGCMTPDILSHNFANESVFDPLQILRTGQLGEWFAVLLSIFSEFAIVTSFIGITYGLADFFQDISIITKSEISRLPLYSLVLLPPLSLGTFNPNIFFHALEYTGAFSVSILGGIMPALMSWKQSQTPEFANGNYQTLVPGGKITLIFIMVGALFLICRQILVIYQF
>NZ_CP011456.1|WP_081424154.1|1276929_1278618_+|IS1634-family-transposase
MTTEILEATVVKLKPQEIEIQNIDHLGIVAGIIDSIGIVEIINELIGIEKDEKVNAGQVVKAMIINGLGFVSKPLYMFPKYFETIACEHLIGAGVKPEYLNDDKLGRVMDKLFIKGLDTIFFIIAVKAAKKFGVSLSTSHLDSSSMHVHGQYNTSLPEVIFENQKVGDNQELEELAVKSPKEITITYGYSRDHRPDLKQFIIEMICSGDGDIPIFLKLASGNQTDSSCFGQIAVEYQKQLEVNSLIVADSALYTESNLKMMSDLQWLCRVPLTIKAAKSLISTIPESEFIDSTIPGYKLASKTENYAEIEQRWLVVQSQERRESDLRKLTQKIIKAESKAVQDLKKLSQEEFACEADAIKALSKLSKQFKYHQINVSIVTQIKSKTKDSPQEICYQISATVSQDESKINTELLSAGRFIIATNVLDSKELSDDSMLSEYKAQQSCERGFGFLKDPLFFADSIFLKSPERIESLGMIMGLCLLVYTLAQRQIRNALKESKSTIKNQLGKATNRPTLRWIFQCFQCIHLVTINQEEYISNWNQDRDFILRLLPDDCLRYYQLVT
>NZ_CP011456.1|WP_081424155.1|1278769_1278958_+|C4-dicarboxylate-ABC-transporter
MLTSPGGVHSYCSLLRMGFDAIFGDLLFLKCLFSLYMSVFMLTLIFHLRNFPLEQFGVRNVG
>NZ_CP011456.1|WP_053538268.1|1278976_1279348_-|hypothetical-protein
MEVESWFLAEYNHFLKIDPGLTPEQIQSIFGFNPQTDDMEQRPHPADDLKQIYNYAGKGYNKSEKQINRLASNLDYEFLYMYLANSVPSLGEFVRYIDKLALLIKGMNFSLTQRRKDALRFEF
>NZ_CP011456.1|WP_053538269.1|1279852_1280419_+|Uma2-family-endonuclease
MLQVKHQFQSFEEYLSYDDGTDKLYELFNGELIEMPPESGINVQIANRLFLIFALLIGIDRVRGHGLELEVRGEPRNRYPDLTIIREEHIQQLANRNTIRLSMLPPLLVVEVVSPGELQRDRDFIAKRLQYQDCGIPEYWIIDPQTQSILVLELINKIYHEIGIFSGDDLVLSPQFNSLNLKGSQIFA

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Crispr_ID: NZ_CP011456_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011456_9

1527540-1527657

Orphan

Consensus_repeat	Method
TTTGTCTGAATCAGGATGTACAGGATTTGAGGATTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP011456_9

>merge|NZ_CP011456|9|1527540-1527657|CRISPRCasFinder
TTTGTCTGAATCAGGATGTACAGGATTTGAGGATTTACAGGATTTAATTAAATACTTTATCCTGTTTATCCTTTAATCCTTTTTTGTCTGAATCAGGATGTCCAGGATTTGAGGATTT

>NZ_CP011456|9|9|1527540-1527657|CRISPRCasFinder
TTTGTCTGAATCAGGATGTACAGGATTTGAGGATTT	ACAGGATTTAATTAAATACTTTATCCTGTTTATCCTTTAATCCTTT
TTTGTCTGAATCAGGATGTCCAGGATTTGAGGATTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011456.1\|WP_053538434.1\|1536509_1538033_+\|glycosyltransferase-family-39-protein	unknown	unknown	gnl\|CDD\|224720
NZ_CP011456.1\|WP_053537530.1\|1528975_1530175_-\|IS4-family-transposase	unknown	unknown	gnl\|CDD\|376573
NZ_CP011456.1\|WP_027402068.1\|1533075_1534020_-\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|133030
NZ_CP011456.1\|WP_081424165.1\|1538040_1538388_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053538424.1\|1513515_1514745_-\|elongation-factor-Tu	unknown	unknown	gnl\|CDD\|177010
NZ_CP011456.1\|WP_053538432.1\|1531275_1532214_-\|polysaccharide-deacetylase-family-protein	unknown	unknown	gnl\|CDD\|213022
NZ_CP011456.1\|WP_027402060.1\|1519089_1519506_-\|cupin-domain-containing-protein	unknown	unknown	gnl\|CDD\|307270
NZ_CP011456.1\|WP_027402058.1\|1517024_1517495_-\|30S-ribosomal-protein-S7	unknown	unknown	gnl\|CDD\|235398
NZ_CP011456.1\|WP_015078104.1\|1517876_1518260_-\|30S-ribosomal-protein-S12	unknown	unknown	gnl\|CDD\|235355
NZ_CP011456.1\|WP_015113498.1\|1513033_1513351_-\|30S-ribosomal-protein-S10	unknown	unknown	gnl\|CDD\|179076
NZ_CP011456.1\|WP_053538429.1\|1522853_1527539_+\|glutamate-synthase-large-subunit	unknown	unknown	gnl\|CDD\|236968
NZ_CP011456.1\|WP_053538427.1\|1518573_1518900_-\|iron-sulfur-cluster-assembly-accessory-protein	unknown	unknown	gnl\|CDD\|223393
NZ_CP011456.1\|WP_053538428.1\|1519864_1521718_-\|phosphodiester-glycosidase-family-protein	unknown	unknown	gnl\|CDD\|378342
NZ_CP011456.1\|WP_053538435.1\|1538843_1539563_+\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|226983
NZ_CP011456.1\|WP_027402067.1\|1532570_1532945_-\|EamA-family-transporter	unknown	unknown	gnl\|CDD\|185011
NZ_CP011456.1\|WP_053538425.1\|1514767_1516846_-\|elongation-factor-G	unknown	unknown	gnl\|CDD\|234569
NZ_CP011456.1\|WP_053538433.1\|1534067_1536506_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224720
NZ_CP011456.1\|WP_039201961.1\|1539665_1540448_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226218
NZ_CP011456.1\|WP_053538426.1\|1518311_1518602_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053538430.1\|1528644_1528995_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP011456.1\|WP_053538434.1\|1536509_1538033_+\|glycosyltransferase-family-39-protein	gnl\|CDD\|224720	COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane].	3.26627e-67
NZ_CP011456.1\|WP_053537530.1\|1528975_1530175_-\|IS4-family-transposase	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	3.11832e-09
NZ_CP011456.1\|WP_027402068.1\|1533075_1534020_-\|glycosyltransferase-family-2-protein	gnl\|CDD\|133030	cd04187, DPM1_like_bac, Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.	5.52032e-94
NZ_CP011456.1\|WP_053538424.1\|1513515_1514745_-\|elongation-factor-Tu	gnl\|CDD\|177010	CHL00071, tufA, elongation factor Tu.	0
NZ_CP011456.1\|WP_027402060.1\|1519089_1519506_-\|cupin-domain-containing-protein	gnl\|CDD\|307270	pfam01050, MannoseP_isomer, Mannose-6-phosphate isomerase. All of the members of this Pfam entry belong to family 2 of the mannose-6-phosphate isomerases. The type II phosphomannose isomerases are bifunctional enzymes. This Pfam entry covers the isomerase domain. The guanosine diphospho-D-mannose pyrophosphorylase domain is in another Pfam entry, see pfam00483.	1.41195e-62
NZ_CP011456.1\|WP_053538432.1\|1531275_1532214_-\|polysaccharide-deacetylase-family-protein	gnl\|CDD\|213022	cd10917, CE4_NodB_like_6s_7s, Catalytic NodB homology domain of rhizobial NodB-like proteins. This family belongs to the large and functionally diverse carbohydrate esterase 4 (CE4) superfamily, whose members show strong sequence similarity with some variability due to their distinct carbohydrate substrates. It includes many rhizobial NodB chitooligosaccharide N-deacetylase (EC 3.5.1.-)-like proteins, mainly from bacteria and eukaryotes, such as chitin deacetylases (EC 3.5.1.41), bacterial peptidoglycan N-acetylglucosamine deacetylases (EC 3.5.1.-), and acetylxylan esterases (EC 3.1.1.72), which catalyze the N- or O-deacetylation of substrates such as acetylated chitin, peptidoglycan, and acetylated xylan. All members of this family contain a catalytic NodB homology domain with the same overall topology and a deformed (beta/alpha)8 barrel fold with 6- or 7 strands. Their catalytic activity is dependent on the presence of a divalent cation, preferably cobalt or zinc, and they employ a conserved His-His-Asp zinc-binding triad closely associated with the conserved catalytic base (aspartic acid) and acid (histidine) to carry out acid/base catalysis. Several family members show diversity both in metal ion specificities and in the residues that coordinate the metal.	4.0802e-76
NZ_CP011456.1\|WP_027402058.1\|1517024_1517495_-\|30S-ribosomal-protein-S7	gnl\|CDD\|235398	PRK05302, PRK05302, 30S ribosomal protein S7; Validated.	5.96261e-95
NZ_CP011456.1\|WP_015078104.1\|1517876_1518260_-\|30S-ribosomal-protein-S12	gnl\|CDD\|235355	PRK05163, rpsL, 30S ribosomal protein S12; Validated.	7.73694e-88
NZ_CP011456.1\|WP_015113498.1\|1513033_1513351_-\|30S-ribosomal-protein-S10	gnl\|CDD\|179076	PRK00596, rpsJ, 30S ribosomal protein S10; Reviewed.	4.44006e-64
NZ_CP011456.1\|WP_053538429.1\|1522853_1527539_+\|glutamate-synthase-large-subunit	gnl\|CDD\|236968	PRK11750, gltB, glutamate synthase subunit alpha; Provisional.	0
NZ_CP011456.1\|WP_053538427.1\|1518573_1518900_-\|iron-sulfur-cluster-assembly-accessory-protein	gnl\|CDD\|223393	COG0316, sufA, Fe-S cluster assembly scaffold protein [Posttranslational modification, protein turnover, chaperones].	7.8399e-42
NZ_CP011456.1\|WP_053538428.1\|1519864_1521718_-\|phosphodiester-glycosidase-family-protein	gnl\|CDD\|378342	pfam09992, NAGPA, Phosphodiester glycosidase. This is a family conserved from bacteria to humans. The structure of a member from Bacteroides has been crystallized and modelled onto the luminal region of the human member of the family, the transmembrane glycoprotein N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase. There is some conservation of potentially functional residues, implying that in the bacterial members this family acts in some way as a phosphodiester glycosidase. The human protein is also present, so the eukaryotic members are likely to be catalyzing the second step in the formation of the mannose 6-phosphate targeting signal on lysosomal enzyme oligosaccharides.	2.41747e-28
NZ_CP011456.1\|WP_027402067.1\|1532570_1532945_-\|EamA-family-transporter	gnl\|CDD\|185011	PRK15051, PRK15051, 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional.	8.89875e-05
NZ_CP011456.1\|WP_053538425.1\|1514767_1516846_-\|elongation-factor-G	gnl\|CDD\|234569	PRK00007, PRK00007, elongation factor G; Reviewed.	0
NZ_CP011456.1\|WP_053538433.1\|1534067_1536506_+\|hypothetical-protein	gnl\|CDD\|224720	COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane].	5.41034e-28
NZ_CP011456.1\|WP_039201961.1\|1539665_1540448_-\|ABC-transporter-permease	gnl\|CDD\|226218	COG3694, COG3694, ABC-type uncharacterized transport system, permease component [General function prediction only].	3.51888e-95
NZ_CP011456.1\|WP_053538435.1\|1538843_1539563_+\|Uma2-family-endonuclease	gnl\|CDD\|226983	COG4636, Uma2, Endonuclease, Uma2 family (restriction endonuclease fold) [General function prediction only].	1.48292e-18

>NZ_CP011456.1|WP_053538429.1|1522853_1527539_+|glutamate-synthase-large-subunit
MNHQPSNQGQQITVSDTNFPDTYPGQKWLVEERDACGVGFITHRQNIASHEILDQALTALTCLEHRGGCSADQDSGDGAGILTAIPWELLAQDKNHGIDFAKLSNMAVGMIFFPQDATAAKAAKAAFAQIAAEERLTILGWRVVPVRPEVLGMQAKENQPQIEQVIISCADKSGDELERELYIARRRIMQAGRKISEDFYVCSLSSRTIVYKGMVRSAVLGDFYEDLKNPAFKVAFAVYHRRFSTNTMPKWPLAQPMRLLGHNGEINTLLGNINWMMAREATLSHPIWEDRFDELKPMVNIDNSDSATLDNVLELLVRSGRSPLEGLMMMVPEAYKNQPSLAEYPEIVDFYEYYSGLQEAWDGPALLVFSDGKKVGATLDRNGLRPARYVITKDDYIVVASEAGVVDFPEENILEKGRLGPGQMIAVDLNTQEILKNWEIKQRIAKQHPYGEWLQQYRQELSKLVKGKSVVNGNGNGNGHLSTNNEQLTTDKIDSQVLLQQQIAFGYTIEDVEMVIHPMASTGAEATFCMGDDIPLAVLSEKSHLLYDYFKQRFAQVTNPAIDPLREKLVMSLTVELGEKGNLLEPKPEYARRLKLESPVLTQTELETIKLSGFATAELSTLFPIATGPDGLKTAVESLQKQAAESVRAGAKILILSDRTGTGIAAEYTYIPPLLAIGAVHHHLIREGLRMKTSLIVDTAQCWSTHHFACLLGYGAGAVCPYMALDTVTAWWHEPKTQQFMTRGKIATLTLNQAVENYRKAIESGLLKILSKMGISLLSSYQAAQIFEAIGIGGDLLALGFRGTTSRIGGLSVSELAQEVLSFHSKAFPELTAKKLENLGFVQYRPGGEYHMNSPELAKSLHKAVNGKQYDHYEVYKQHLHNRPVTALRDLLDFHSERSPIPLEEVESVNDIVKRFCTGGMSLGALSREAHETLAIAMNRIGGRSNSGEGGEDPVRYNVLNDVDTAGKSPTLPHLNGLKNGDTAASAIRQIASGRFGVTPQYLATAQQLEIKIAQGAKPGEGGQLPGPKVSPYIAMLRRSKPGVTLISPPPHHDIYSIEDLAQLIFDLHQINPKAQVSVKLVAEIGIGTIAAGVAKANADIIQISGHDGGTGASPLSSIKHAGSPWELGLTEVHRVLMENSLRDRVILRVDGGLKSGWDVLVGALMGAEEFGFGSIAMIAEGCIMARICHTNNCPVGIASQKEEMRKRFTGIPEHVVNFFYFIAEEVRSLLAKLGYRSLSEVIGRADLLTVRSEVRLNKTQALNLDCLTKLPDAKVNRSWLVHEKVHSNGPVLDDQLLADADIQAAIQNQGEVSKTVTVVNTDRTVGARLTGAIAHKYGDNGFTGQINLNFQGSVGQSFGAFNLDGVILNLVGEANDYVGKGMNGGEIIIKPPANATYNPAENVIVGNTCLYGATGGVLFANGLAGERFAVRNSKGTAVIEGAGDHCCEYMTGGVIVVLGKAGRNVGAGMTGGLAYFLDEVGNFPDFVNHAIVKVQRVVSEAGAKQLYELIQTHAQKTGSPKAQEIIANWEVYLPKFWQLVPPSESDSPEAKVAEKQLSSV
>NZ_CP011456.1|WP_053538428.1|1519864_1521718_-|phosphodiester-glycosidase-family-protein
MILKILNSVLPLLSTALCLTATYGAFAQDTPSLLTPVPTSVSAGNQIILNGRILPGAWLQPTATTIKGQTYLSDGAVKQLIGIDLLNSSNPGKQPVQWFSGLTNPLIFNTNLSGGYRYLDITQLAQTAKWQIQANGNTLVISTPPSQLKNIRLGKQPKGDRVVLDLDIATPWQIRQELPVKKVVDPDEIISKSTTPPNREWTLTLDGIADPTLIQRYNSQPTTPPISVSIIQKVEVVNNQTILRLSIPFGQSLQVSTIPQPNRLVIDIQPDAMVEKTIAWAQGLQWRQQLVTLGTDRFPVVWLDINPRSVGLSIKPIITNPQTLTGTAPLIQTAQNYLAVAAVNGGYFNRNNKLPLGAIRRDNQWISGPILNRGAIAWNNNGQFYFGRLTLTEALITNNNQRLPISLLNTGYVQRGIARYTPVWGNTYTPLADNETIVVVENNQVSNQLAGGKSGITTIPIPENGYLLIFRNQTPQLPIGTKVSLTSTTTTPEFSRYPHIIGAGPLLVQNRQIVLDGPAETFSPAFMTSQAVRSSICTTSTGNLMIAAVHSRAGGGGPTLAEQAKLMQTMGCINALNLDGGSSTSLYLGGQLLDRSPSTAARVHNGIGIFISPKVPK
>NZ_CP011456.1|WP_027402060.1|1519089_1519506_-|cupin-domain-containing-protein
MAKLSETAPNTLTLQPTINARSIAAGELRPWGSFTVLEEGRGYKIKRIEVKPGHRLSLQMHHHRSEHWIVVSGTAKVVCGDKEILLSNNQSTYVPQCTTHRLENPGVIPLVLIEVQNGEYLGEDDIIRYQDDYARSEK
>NZ_CP011456.1|WP_053538427.1|1518573_1518900_-|iron-sulfur-cluster-assembly-accessory-protein
MIHFSPTAINEIGRLKSKQPSDTLFRLRVKSGGCADLFYDLAFDTTVQSQDQVLELHDIRVIIDPESINYINELSIDYSEDLMGGGFRFHNPQATSTCSCGNSFSISH
>NZ_CP011456.1|WP_053538426.1|1518311_1518602_-|hypothetical-protein
MVILSLLVISHWSLVISHWSLVIGHWSVVSCQLSVVIGHWSLGKFFLPPLLPLLPQLPQLPQLPQLPLLPLLPQLPLFPIPYSLPKMIDRKSKKKI
>NZ_CP011456.1|WP_015078104.1|1517876_1518260_-|30S-ribosomal-protein-S12
MPTIQQLIRSERELARQKTKSPALKQCPQRRGVCTRVYTTTPKKPNSALRKVARVRLTSGFEVTAYIPGIGHNLQEHSVVMIRGGRVKDLPGVRYHIIRGTLDTAGVKDRKQGRSKYGTKLPKAGKK
>NZ_CP011456.1|WP_027402058.1|1517024_1517495_-|30S-ribosomal-protein-S7
MSRRGVSQRRAVPPDSVYNSRLISMMMRRIMRHGKKSIAARIVYDALKTIEERTGGSPLETFEKAVRNATPLVEVKARRVGGATYQVPMEVRTDRGTTLALRWLVQYSRQRPGRTMAGRLANELMDAANETGSAIRKREETHRMAEANKAFAHYRY
>NZ_CP011456.1|WP_053538425.1|1514767_1516846_-|elongation-factor-G
MARTNPLEKVRNIGIAAHIDAGKTTTTERILFYSGIIHKIGEVHEGTAVTDWMEQERERGITITAAAISTSWNDHQINIIDTPGHVDFTIEVERSMRVLDGVIAVFCSVGGVQPQSETVWRQADRYKVPRIAFINKMDRTGANFYRVHDQMVDRLRANAIAIQLPIGSETEFKGIIDLVKMCAYMYTNDQGTDIQTIEIPAELAEKAAQYRTKLVEAVSETDDTLMNKYFDGEELTEAEIRTALRKGTIAGTIVPVLCGSAFKNKGVQLMLDAVIDYLPSPLEVPPIQGTLLNGDPVERHADDEEPLSALAFKIMADPYGRLTFVRVYSGVLKKGSYVLNVSKNKKERISRLVLMKADDRQDVDELRAGDLGAALGLKDTLTGDTLCDEGSPVILESLFIPEPVISVAVEPKTKNDMDKLSKALQSLSEEDPTFRVRVDPETNQTVIAGMGELHLEILVDRMLREFKVEANVGAPQVAYRETIRKAVEKIDGKFIRQSGGKGQYGHVVINLEPGEPGTGFVFVSKIVGGIVPKEYIGPAEQGMKECCESGILAGYPLIDVKATLIHGSYHDVDSSEMAFKIAGSMAIKEAATKASPVILEPIMKVEVEVPEDYIGNVIGDLISRRGQIESQSTEQGLAKVVSKVPLATMFGYATDIRSKTQGRGIFTMEFSTYEEVPRSVAEGIISKSKGNA
>NZ_CP011456.1|WP_053538424.1|1513515_1514745_-|elongation-factor-Tu
MARAKFERNKPHVNIGTVGHVDHGKTTLTAAITMTLAANGQAVGKGYDQIDNAPEEKARGITINTAHVEYETTARHYAHVDCPGHADYVKNMITGAAQMDGGILVVAATDGPMPQTREHILLAKQVGVPSLVVFLNKQDMMDDEELMELVELELRELLTAYDFPGDDIPIIKGSGLKALEAMTANPKTQRGENEWVDKIYELMDAVDASIPTPERAVDKPFLMAVEDVFTITGRGTVATGRIERGKVKVGDTVELIGIRDTRSTAVTGIEMFKKSLDEGMAGDNAGVLLRGMKKEDIERGMVIAKPGSITPHTQFEGEVYVLTEKEGGRKTPFFSGYRPQFYVRTTDVTGTIKAFTDSDGNDVEMVMPGDNIKVTVELINAIAIEQGMRFAIREGGRTIGAGVVAKILK
>NZ_CP011456.1|WP_015113498.1|1513033_1513351_-|30S-ribosomal-protein-S10
MATLQQQKIRIRLKAFDRRLLDTSCEKIVDTANRTNATAIGPIPLPTKRKIYCVLRSPHVDKDSREHFETRTHRRIIDIYQPSSKTIDALMKLDLPSGVDIEVKL
>NZ_CP011456.1|WP_053538430.1|1528644_1528995_+|hypothetical-protein
MPHLRSFYVVHPDDWLLQEFSLGIQNRSKESIRQWILRELLETYNYPTGWLENQISLVDSESLELEVEDFFGIRLLTTNGEPFFWISISEENELEKAENRLVSILTGDKAAKELVS
>NZ_CP011456.1|WP_053537530.1|1528975_1530175_-|IS4-family-transposase
MLPQSYQTIFRKHLSEQQYLTLEILLLLIQAHRQVKLSKLASLFPQPIKYESRKRNLQRFLGIGKLCVKLLWFPLIKYWIRQSLTPKQLNREQRRYFHKKQYQKYGYWMVALDRTQWKGRNIFMVTLVWGTHALPLYWETLNHVGNSNLQTQKRLIKTAIKLLKKCRIVVLADREFHSPKLAKWLDEQGVYFALRQKKNLYFQEKPEQEYQVLKNQGFKPGMSRFYEKVKCGKGDELGLFNIAVYWKRKYRNSGPKEPWYILTNLPTLQQTLCLYRCRWGIEQFFKDCKTGGYNLEDTKVNETRFLALVLLIVIAYSLATMHGQRMKKLGIETYAGRIQQHQDKYPRQSDFSFALYGQLWIYGMELWADLALNLINLKPHKRLFFQRGFQALSLMKQAL
>NZ_CP011456.1|WP_053538432.1|1531275_1532214_-|polysaccharide-deacetylase-family-protein
MENNKSFFGKQGILIAILGLTGTLSIALMILFKAKISDAQSQGVIVKNKDIAANVKTQQRLEEFKTEMLTTWQQEAQAKGVSTDVPSNFQGIVISEAKLPPGNKVIALTFDDGPWPSSTAKVLDILKKNNIKGTFFVVGQNVKNYPDLTKRVVTDGHIIANHTWHHWYHHMNAQTAAYEVANTTDIIYKTTGIKTSLFRPPGGNMRNGVAAYAKSNKYAVIMWSSDSMDYSRPGVPRLINNIFREAKPGGIVLMHDGGGDRSHTVKALPEIISRFRKQGYEFVTVPELLEMQDQYPQLVAHNKTKSQKAKKP
>NZ_CP011456.1|WP_027402067.1|1532570_1532945_-|EamA-family-transporter
MSIPEFSLLLISVLISVAGQFFLKMGAIKLGKVHIGNIINLILNMITIPEVLLGLTCYGIGAVTYILLLTRINLSVAAPAVSIGYIFSVLLGYFVLKEPISLTRVFGLGLIVTGVILVIWKKST
>NZ_CP011456.1|WP_027402068.1|1533075_1534020_-|glycosyltransferase-family-2-protein
MNQPIYSLVIPIYNEEENIMEMYRRLHDVMEQLDGDVELILIDDGSRDRSLSMMRELHHRDHRVHYLSLARNFGHQIAVTAGLNFVQGKCIIVMDADLQDPPELILTMIEKWHQEYQVVYAQRISRQKEGWLKRLTAYLFYRLLRRLAKVDIPVDTGDFCLMDRQVVDILNSMPERNRYVRGLRAWVGFRQTSVLFERNPRFAGDVKYTFGKSLSLAIDGIISFSTVPLRLATYLGIISATIAMIMIVLVLYWRIFAPVSHLIGYTLITISMFFLGSVQLVCIGILGEYIGRIYEEVKGRPLYTLKESGGFTKN
>NZ_CP011456.1|WP_053538433.1|1534067_1536506_+|hypothetical-protein
MNYSSYLKINKDYIILLTIWLIGLMIDRTWFFLDESIPAYDQSAHLTGALHHYRIFQNLNILSGDWWLSLWQLTPSYRAPFVYICTVPFLVLFGKGHDQASLVNLVYTAVIILSVYHLGNYLFQNRKIGITASIFCLLFPIMGIIRTDYLLDYGLTAIVIATFTVLTIWKDSYSGFLSWILTLLLGIGIGLIMLSKPTGFIFILIPSICTLIIFISKRKFIKLIQTGLSLILAWLIAGSWYSVNWLTIITSALNANHVGIGEGDPSATTIAGWLYYPQAIPETVGFPILFVSIGIFLIYLFKRRVTQNVLPDNLSKSALTWLFISLISSYIICSLGTNKDIRFILPCFPVISLILAYFFNLIDNIWFNKLRLATFVLSGIILLNNLFPLPLIQAWGGKHLPNDESKKYPLAELMEKINQTTPYLRTTLGVIPVSTPQVNEFTLDYFGTLADFRIYGRKLTMKLSQVNQDLQYLSWYVTKDNEPDEPGEKGETKRKLKSLVESDPELKLQNDWVLPHGDKLRLYHRKNPHVVVEKLNVDNKPLALEKVIIANEVITNQNNSVTYEITGSWDELQNGLLLLKWQNGQSAWYHDHAIALGNLYCGIKCHPQGNFRVIENLATFIPQELPLGKYQLSALYLDKINGKITPLNIPNIIVNVTDTGKLEKTPPLDLVSRMSQLAVDLQQGKLDNIFVQIDNFNQYDPTQDYLKQIEFAANYYLENEPNNLNWRYTLVLSQLLQRKAPELIQNLTELTKYDRHNPYTWLYLAFVYLYDFQPKQAEKQLIIAEKLKPDIPELKTLKTVTNIMKFLPLIHL
>NZ_CP011456.1|WP_053538434.1|1536509_1538033_+|glycosyltransferase-family-39-protein
MSHKQWFLGLLVASLILSLIGLGNLPLRDWDEGTYAIVAREIYRTGNWIYPTIQGDPFLLKPPLMQWFIAVCYHIGGVQEFTTRFPGAFLTALGVPLLYLIGRLAFIKNLPALFSALVYLTLLPVVRHGRLAMLDGMTVSFFLLLLFCILKARHDRKYAVGIGFCLGLITLTKGMLVVVLAVIAGLFIIANKQLAILKNPFLWIGMLLGNLPAIAWYFAQWQHYGNIFLEVHFQSQAFDRLGKAVEGNTGPIWYYLLEVIKYGFPWLLFLPGGLYLSWKNRHTAWGCLTLIGTIVYFAIVSLMSTKLPWYIMPIYPFLALAIGANLSYIWQEEKFKTRFLTGFFAFLVIVGLAGCIYFSIFDKQPLLIVMSVVLAMTMGMTSWFVNQHNRQFIPVLFAGMYLVLGMLMSSQSWIWELNEKFPVLPVAALIRDNVPPGTQIYTSFPDSRPSLDFYSDCKIIPISMADLKDKFADKSYLLLGQDTLQKINLNQIKVMGEANGFKLVAIN
>NZ_CP011456.1|WP_081424165.1|1538040_1538388_+|hypothetical-protein
MYTQVIESPHPNPPLVKGRELIFPVSPQSIGGIKGGNLTCVYQYYCQFSKICLKPKKIVTISIGFQGFGNSIGVHDAFISNWTKIFTVIASEEKQSQPLRLLHFTSFHIANTTLR
>NZ_CP011456.1|WP_053538435.1|1538843_1539563_+|Uma2-family-endonuclease
MSTENNLAIVDWEPHHPPADLIFHDGEVLESNRHRIAMNVLIRSLQQLWSDRNDYFTGGNMFIYYSSSQIRNREFRGPDFFAVLNVDGSNPRQGWVVWEENGRYPDVIVELMSRSTSGIDKGIKKDLYEQTFHTSDYFVYDPFDANSLQGWHLDHEQQYQPLRPNENGWLWCRRLGLWLGTWEGTIDRETAIWVRFYDVAGNLVLLPEEAAKSREEEAQAKAARLAARLRELGENPDML
>NZ_CP011456.1|WP_039201961.1|1539665_1540448_-|ABC-transporter-permease
MPRYLKVLRLFWSAAISAEMEYRINFIIYAISSLGNLVGGIFSLFLFYRTGYTFSGWSWESALVVLGIFTLLQGFAATFLAPNLNRIVRHVQEGTLDFVLLKPIRSQFWLSLHTISPWGIPDLIFGLLIIVYAGTKLNLGIDKYLLSIFPLTCGLVILYSLWFILGATSIWFVKIYNITEVLRGFLEAGRYPITGYPAAYRFFFTFIVPVAFLTTVPAQTMLGQIQLTWLLGAGLLALILFFISTQFWRFALRFYTSASS

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Crispr_ID: NZ_CP011456_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011456_10

1701802-1701953

Orphan

Consensus_repeat	Method
CAGCAAGAAGCAGACAGATTGCAACG	CRISPRCasFinder

2 spacers

PD-DExK

The CRISPR arrays of NZ_CP011456_10

>merge|NZ_CP011456|10|1701802-1701953|CRISPRCasFinder
CAGCGAGAAGCGGAAGCATTGCAACTTCAGCAACGAGCAAAAGAATTATCACAATTACGATTCCAGCAAGAAGCAGACAGATTGCAACGCCAACGAGAGGCAGAAGCAGCCGAACAACTAAGATTGCAGCAAGAAGCAGAAAGATTGCAACG

>NZ_CP011456|10|10|1701802-1701953|CRISPRCasFinder
CAGCGAGAAGCGGAAGCATTGCAACT	TCAGCAACGAGCAAAAGAATTATCACAATTACGATTC
CAGCAAGAAGCAGACAGATTGCAACG	CCAACGAGAGGCAGAAGCAGCCGAACAACTAAGATTG
CAGCAAGAAGCAGAAAGATTGCAACG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011456.1\|WP_053538545.1\|1710338_1711961_+\|TonB-family-protein	unknown	unknown	gnl\|CDD\|367555
NZ_CP011456.1\|WP_053538546.1\|1712059_1712623_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053538533.1\|1694958_1695537_+\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|368559
NZ_CP011456.1\|WP_053538534.1\|1695707_1697051_-\|TRAP-transporter-large-permease-subunit	unknown	unknown	gnl\|CDD\|227010
NZ_CP011456.1\|WP_053538544.1\|1709793_1710132_+\|c-type-cytochrome	unknown	unknown	gnl\|CDD\|184253
NZ_CP011456.1\|WP_053538532.1\|1694383_1694827_+\|cell-division-protein	unknown	unknown	gnl\|CDD\|182138
NZ_CP011456.1\|WP_053538542.1\|1707640_1708810_+\|RpoD/SigA-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|274382
NZ_CP011456.1\|WP_053538547.1\|1712680_1713784_-\|fatty-acid-desaturase	unknown	unknown	gnl\|CDD\|225779
NZ_CP011456.1\|WP_053538549.1\|1714962_1715964_-\|ketoacyl-ACP-synthase-III	unknown	unknown	gnl\|CDD\|236475
NZ_CP011456.1\|WP_053538536.1\|1697945_1698752_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|99749
NZ_CP011456.1\|WP_053538541.1\|1704065_1706534_-\|primosomal-protein-N'	unknown	unknown	gnl\|CDD\|235514
NZ_CP011456.1\|WP_053538530.1\|1691199_1691826_+\|hypothetical-protein	PD-DExK	mkCas0061_PD-DExK_CAS-I:CAS-III	unknown
NZ_CP011456.1\|WP_053538537.1\|1699014_1700154_+\|TRAP-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270400
NZ_CP011456.1\|WP_027402219.1\|1694147_1694390_+\|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|225215
NZ_CP011456.1\|WP_053538531.1\|1691958_1693773_-\|aspartate--tRNA-ligase	unknown	unknown	gnl\|CDD\|234775
NZ_CP011456.1\|WP_053538543.1\|1709049_1709535_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP011456.1\|WP_053538540.1\|1703080_1703962_+\|DUF4351-domain-containing-protein	unknown	unknown	gnl\|CDD\|316753
NZ_CP011456.1\|WP_053538535.1\|1697059_1697683_-\|TRAP-transporter-small-permease-subunit	unknown	unknown	gnl\|CDD\|227011
NZ_CP011456.1\|WP_053538548.1\|1713940_1714822_-\|ACP-S-malonyltransferase	unknown	unknown	gnl\|CDD\|272922
NZ_CP011456.1\|WP_053538538.1\|1700321_1700717_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP011456.1\|WP_053538533.1\|1694958_1695537_+\|Uma2-family-endonuclease	gnl\|CDD\|368559	pfam05685, Uma2, Putative restriction endonuclease. This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. A small number of member proteins also contain pfam02861 domains that are involved in protein interactions. Solutions of several structures for members of this family show that it is likely to be acting as an endonuclease.	4.41819e-47
NZ_CP011456.1\|WP_053538534.1\|1695707_1697051_-\|TRAP-transporter-large-permease-subunit	gnl\|CDD\|227010	COG4664, FcbT3, TRAP-type mannitol/chloroaromatic compound transport system, large permease component [Secondary metabolites biosynthesis, transport, and catabolism].	5.68523e-165
NZ_CP011456.1\|WP_053538544.1\|1709793_1710132_+\|c-type-cytochrome	gnl\|CDD\|184253	PRK13697, PRK13697, cytochrome c6; Provisional.	7.08159e-57
NZ_CP011456.1\|WP_053538532.1\|1694383_1694827_+\|cell-division-protein	gnl\|CDD\|182138	PRK09907, PRK09907, endoribonuclease MazF.	2.31406e-30
NZ_CP011456.1\|WP_053538535.1\|1697059_1697683_-\|TRAP-transporter-small-permease-subunit	gnl\|CDD\|227011	COG4665, FcbT2, TRAP-type mannitol/chloroaromatic compound transport system, small permease component [Secondary metabolites biosynthesis, transport, and catabolism].	6.91081e-49
NZ_CP011456.1\|WP_053538547.1\|1712680_1713784_-\|fatty-acid-desaturase	gnl\|CDD\|225779	COG3239, DesA, Fatty acid desaturase [Lipid metabolism].	1.15181e-31
NZ_CP011456.1\|WP_053538549.1\|1714962_1715964_-\|ketoacyl-ACP-synthase-III	gnl\|CDD\|236475	PRK09352, PRK09352, beta-ketoacyl-ACP synthase 3.	5.47322e-179
NZ_CP011456.1\|WP_053538536.1\|1697945_1698752_-\|hypothetical-protein	gnl\|CDD\|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	1.22734e-15
NZ_CP011456.1\|WP_053538541.1\|1704065_1706534_-\|primosomal-protein-N'	gnl\|CDD\|235514	PRK05580, PRK05580, primosome assembly protein PriA; Validated.	0
NZ_CP011456.1\|WP_053538537.1\|1699014_1700154_+\|TRAP-transporter-substrate-binding-protein	gnl\|CDD\|270400	cd13682, PBP2_TRAP_alpha-ketoacid, Substrate-binding component of an alpha-keto acid binding Tripartite ATP-independent Periplasmic transporter and related proteins; contains the type 2 periplasmic-binding protein fold. This subgroup includes TRAP transporters that bind to ketoacids such as pyruvate and alpha-ketobutyrate, xylulose, and other unknown ligands. TRAP transporters are a large family of solute transporters ubiquitously found in bacteria and archaea. They are comprised of a periplasmic substrate-binding protein (SBP; often called the P subunit) and two unequally sized integral membrane components: a large transmembrane subunit involved in the translocation process (the M subunit) and a smaller membrane of unknown function (the Q subunit). The driving force of TRAP transporters is provided by electrochemical ion gradients (either protons or sodium ions) across the cytoplasmic membrane, rather than ATP hydrolysis. This substrate-binding domain belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	0
NZ_CP011456.1\|WP_027402219.1\|1694147_1694390_+\|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein	gnl\|CDD\|225215	COG2336, MazE, Growth regulator [Signal transduction mechanisms].	6.43467e-28
NZ_CP011456.1\|WP_053538531.1\|1691958_1693773_-\|aspartate--tRNA-ligase	gnl\|CDD\|234775	PRK00476, aspS, aspartyl-tRNA synthetase; Validated.	0
NZ_CP011456.1\|WP_053538543.1\|1709049_1709535_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	8.24451e-19
NZ_CP011456.1\|WP_053538540.1\|1703080_1703962_+\|DUF4351-domain-containing-protein	gnl\|CDD\|316753	pfam14261, DUF4351, Domain of unknown function (DUF4351). This domain is found in bacteria, and is approximately 60 amino acids in length.	3.54207e-21
NZ_CP011456.1\|WP_053538542.1\|1707640_1708810_+\|RpoD/SigA-family-RNA-polymerase-sigma-factor	gnl\|CDD\|274382	TIGR02997, RNA_polymerase_sigma_subunit_sigma70/sigma32, RNA polymerase sigma factor, cyanobacterial RpoD-like family. This family includes a number of closely related sigma-70 (TIGR02937) factors in the cyanobacteria. All appear most closely related to the essential sigma-70 factor RpoD, and some score above trusted to the RpoD C-terminal domain model (TIGR02393).	9.67254e-158
NZ_CP011456.1\|WP_053538548.1\|1713940_1714822_-\|ACP-S-malonyltransferase	gnl\|CDD\|272922	TIGR00128, Malonyl_CoA-acyl_carrier_protein_transacylase, malonyl CoA-acyl carrier protein transacylase. This enzyme of fatty acid biosynthesis transfers the malonyl moeity from coenzyme A to acyl-carrier protein. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension. [Fatty acid and phospholipid metabolism, Biosynthesis].	2.36371e-103
NZ_CP011456.1\|WP_053538545.1\|1710338_1711961_+\|TonB-family-protein	gnl\|CDD\|367555	pfam03544, TonB_C, Gram-negative bacterial TonB protein C-terminal. The TonB_C domain is the well-characterized C-terminal region of the TonB receptor molecule. This protein is bound to an inner membrane-bound protein ExbB via a globular domain and has a flexible middle region that is likely to help in positioning the C-terminal domain into the iron-transporter barrel in the outer membrane. TonB_C interacts with the N-terminal TonB box of the outer membrane transporter that binds the Fe3+-siderophore complex. The barrel of the transporter, consisting of 22 beta-sheets and an inside plug, binds the iron complex in the barrel entrance.	1.03859e-15

>NZ_CP011456.1|WP_053538538.1|1700321_1700717_+|hypothetical-protein
MTDNRTIQFTFAIDDPELDDERRLKIASKLLRELRDSDEVEKVDRAEDFNPEAGSKPGFATLIGVLTAQVSMKNIKTFLSFLGDRLKDQSLEITVKVGDKEVSIKAKSRQELLESEKIAKDLLAAMGGDNG
>NZ_CP011456.1|WP_053538537.1|1699014_1700154_+|TRAP-transporter-substrate-binding-protein
MKRRAIVNRLSQSAIAATGVAIVGGCQKAQNQAATGQTDTSNLPTVKWQMATSWPLSLETIFGGAQVLAERVKFLTNGKFIIEPRAAGEIAPGLEVLNVVSQGAVQAGHTAAYYYIGKSPALGFGTSVPFGLNAQQQNAWLYEGGGLTKLREIYASKFNVIQFPAGNTGTQMGGWFRNEVKTLNDLKGLKMRIPGLGGQVMAKLGVTVQTLPGGEIFQALQTGAIDAAEWVGPYDDEKLGLNKVAKFYYYPGWWEPGPTLEVQVNLDEWKKLPAQYQAALETAAYQSNTTMLARYDARNGEALERLLKTGTQVRAYSQEILEAAEKASFALYDEFAAKDADFKAVYEQWKPFRDRMYAWNNLNEGSLTRYAYGKLKAGS
>NZ_CP011456.1|WP_053538536.1|1697945_1698752_-|hypothetical-protein
MLETVLAEPSIKLPPTQAELPCDDGIPMETQRHKLQMDILIDTIQPWLDQRTDGYVGGNMFVYYSLAQLKNQDFRGPDFFAVLGVPKTERLSWVVWEEGKPPDVVIELLSETTANNDKNQKKLIYQNQMRVSEYFWYDPFNPNDFAGFDLNSGAYQQIALNEKNQLVSKVLNLALVRWEGNYRGVDATWLRWATLDGELFPTSQEMVIITQQRADEIEQIAEQEKQRAEQAELQLRQVAIKLLQNGMSIEQVAQLTNLDILEVEQLMN
>NZ_CP011456.1|WP_053538535.1|1697059_1697683_-|TRAP-transporter-small-permease-subunit
MRHSKRFAFISKLLKFSQFIDNGADKLGWLSNWLVLLTIGVGFFNVVARYMGRFIGVQLSSNALLELQWYLFSLTFLFGFVYILRHGENVRVDFLYTNMSEKKRALVDFVGTVLFLIPFCLLGIWVTINPVLQSWGRLSDGSWGTWEISSDANGLPRAPIKTMVPIALLLLLLQSISQAIKYLAVLLGYQQVAEQIRLETSENINIE
>NZ_CP011456.1|WP_053538534.1|1695707_1697051_-|TRAP-transporter-large-permease-subunit
MGFEWLAVLMFVGFFFILMSGFPVAFSFAGTAIVFGLIGTAVGAFNPARLLLLPNSWFGTMSNFTLLAIPFFVFLGAVLEKSGLAEELLETIGIILSRVRGGLALAVVLVGTVLAATTGVVAATVIVMGMLSLPLMLRYGYDKKLASGVIIASGTLAQLIPPSLVLVILSDQIGVSVGDLFLGALIPGLMLSTSYILYILGLAFFQPEKVPLIPDDVVIPQGTQLIKQIFKAVVPPIILIFAVLGSIFFGVATPTEAGAVGAVGASILAAFNKRLTPQLIRDAAHSTAVITALVVMILFCSSMFSLVFDALGGKTLITNLLVGLPGGYWGFLIVSNIVIFILGAFLEFIEICFIAMPLFVPAAQALHIDMVWFGVVMAVNLQTAFISPPVGFSLFYLQSVAPKEVSTLDIHKSAIPFIVLQFIVLLIVIAFPQTVRWLIDISATTGV
>NZ_CP011456.1|WP_053538533.1|1694958_1695537_+|Uma2-family-endonuclease
MTAVTLQIPQSLKFTDDEFVEIVAANKDLRLELSHQGELTIMSPTGGETGNRNFEMCFDLGYWNRQNNLGKAFDSSTGFKLPNGATRSPDVSWIKIERWNVLTPEQRKKFLPLCPDFVIELVSESDDLADTQAKMQEFIANGLRLGWLINPKTKQVEIYRQNQEIEVLQSPISLSGEDVLPGFILDLQPIFL
>NZ_CP011456.1|WP_053538532.1|1694383_1694827_+|cell-division-protein
MVVNSYFPNRGDIVKLEFGNTQRFTADSIKRAFSLQASGMSFDDIAKTLNNELQQLGREQIGYRPVLVISPIKYNRMASLVLVCPINSNPKGLSFEVPLVEGMKTKGVVLADQIKTLDWRARKVKFVESVTQDLIEEVQAKLETLIL
>NZ_CP011456.1|WP_027402219.1|1694147_1694390_+|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein
MTTVVAKWGNSLAIRIPRSVAEQAQVTEGIAINFSVEGNRIVITPQKRKKYTLDELLEGMTPDKFHPEFETGNAVGNEDW
>NZ_CP011456.1|WP_053538531.1|1691958_1693773_-|aspartate--tRNA-ligase
MRTHYCGELRKEHIGETVTFYGWVDRRRDHGGVIFLDLRDRSGIVQIVSDPQRTPDSYEQANTLRNEYVVAITGRVTQRPPESLNPRLPTGEVEIYADKIELLNAVRKQLPFQVSTADTETVREDLRLKYRYLDLRRERMAQNMQLRHQVIKAMRRYLEDLEGFIEIETPILTRSTPEGARDYILPSRVNEGEWFALPQSPQLFKQLLMVSGMDRYYQIARCFRDEDLRADRQPEFTQLDMEMSFMSEDEIIELNEKLVCHIFKTVKGIDLPRPFPRLPYAEAMNRYGSDKPDTRYGLELVDVSDILKDSGFKVFREAISNGGIVKILPIPNGNDAISNVRIKPGGDIFREAAEAGAKGLAYIRVRENGEIDTIGAIKDNLTPEQKQEILTRTGAKAGHLLLFAAADRSTVNKTLDRIRQFVAKEFKLIEKDKINFLWVTEFPMFEWNAGENRLEALHHPFTAPHPDDINDLKTARAQAYDLVLNGFEVGGGSLRIYQREVQEQVFAAIGLSTEEAQSKFGFLLEAFEYGTPPHGGIAYGVDRLVMLLSGEESIRDVIAFPKTQQARCLLTDAPANVDAKQLKELHVASTFKPPLKYQDIMDKL
>NZ_CP011456.1|WP_053538530.1|1691199_1691826_+|hypothetical-protein
MNKSHRPPILKPNETYTFRKYFELRFAPADILQELGVNLTRGTINFPINNDKFTRLVNLKERLEEAIQRVSLTSEAARREVLIAPILLEVAHITESKINIEYPIEINQFLRGDLDYYLQSQHQVLVVEAKHADLTRGFTQLAVELIALDQWIEGDEPILYGAVTTGEIWQFGSFQRENKLITQDLMLYRVPTDLEILMQILVGTLTQN
>NZ_CP011456.1|WP_053538540.1|1703080_1703962_+|DUF4351-domain-containing-protein
MTRFIHDQFAKDYLEELLKPFGEVQAASQVAGEIREIDVLFTPFPNQTTNVELLGLLGKLATTPAIFEPFRNPAGTEEICDCLLKSLEVRGALRRAAKREQTNKTKIQIPKLWILTPTASRNIISGFSETTKPDSLPGIYYLAKSLHAAIVVIHQLPQTQETLWLRLLGRGTVQKRAIDELAALPLNQPYVKITLELLYNLQKNLKINQSSQTEDQELIMRLAPLYQQDRELAKQEGEQRLIIRLLNRRVGEIDSLLIQKVQQLSVEKLEELGEALLDFTSVTDLETWLKNYQ
>NZ_CP011456.1|WP_053538541.1|1704065_1706534_-|primosomal-protein-N'
MYSISVNSSVITVSEPGGLYQSQTKLSQWVEVLVDCPGCSDLFTYKIPEQLEIKPGDILSVPFGATQVGAIAIRLLTQPNLDIPLEKIREVEDVVSEGFFPAGYWILLNRVAAYYYTPLIQVIRVALPPGLLGRSQRRLRLTPLGRENLSIYISPTAQQVITLLQKTPTADYSYHYIQQKVKAAYRGIRELIRLGLAENYLEPPRLTQPKLQKAVTLLDNHDDDLTTRQKEIVEVLRRQGGEMWQSELLQLCATSTSTLKALVDKGYIVIEDREILRQEQGPTVAGDWAKSLTPAQNNALETINSLTGFTQVLLHGVTGSGKTEVYLQAISPLLAQGKSALVLVPEIGLTPQLTDRFRARFGNKVHVYHSALSDGERYDTWRQMLTGEPQIIIGTRSAIFAPLPNLGLIILDEEHDSSFKQDSPIPTYHARTVAQWRAELEHCPLILGSATPSLESWVSRNHQYLSLPERINSRPLPPVEIVDMRQELKEGNRSIFSRKLQNALQQLEERQQQGILFIHRRGHSTFVSCRSCGYVLECPHCDVSLAYHHVEAGAPELLRCHYCNYGRLHPPHCPECSSPYLKFFGSGTQRVAQELTKQFPNLKIIRFDSDTTTKKGSHRELLTRFANGEAHLLVGTQMLTKGLDLPQVTLVGVVAADGLLHLSDYRANERTFQTLTQVAGRAGRGDDPGRVIVQTYTPEHPIIEAVQKHDYQSFCDAELAQRQALNYPPYGRLILLRLSSLDPIQVQNTAQIIATFLNDKEGFEILGPAPASILRVANRYRWQILLKFAPDALPNLPDWPEVRSLIHSSVSLTIDVDPINIM
>NZ_CP011456.1|WP_053538542.1|1707640_1708810_+|RpoD/SigA-family-RNA-polymerase-sigma-factor
MYQTKQPSLKETMNLAELGTMEILENITDHEEPTIESLDQVVYEDTAIVENLESEERNGDDMAAARPSGYNKTENDDAVGAFFKEMARYPLLKPDEEVELARRVRFLEEVKELQAALELELGAHPSKVQVASQLEITEKQLESRLYQGRVAKRKMIRSNLRLVVSIAKRYLNRGVPFLDLIQEGAMGLNRASEKFDPDKGYKFSTYAYWWIRQAITRAIANDARTIRLPIHIVEKLNKLKKAQRELKQKLSRNPTEAEMAESLEITVHQLRQLQQLRRQALSLNHRVGKEEDTELMDLLEDEDNQSPEAKMNENMMRQEIWEVLGDVLTPREKDVISLRYGLTSSEPCTLEEVGNMFNLSRERVRQIQSKAMRKLRRPHIAKRLKGWLV
>NZ_CP011456.1|WP_053538543.1|1709049_1709535_+|GNAT-family-N-acetyltransferase
MTNLIIRFAQPSDSHTLFALIQGLAKYEKLSDAVIGNAEALKDHLFGSPKYVYAILAESQGQAVGFAIFFHNYSTFLTKPGLYLEDIFVLPEYRRQGIGKALLAKVAQIALERDCGRLEWSVLDWNVSAQAFYRNMGADILDDWRICRVTEKDIPQLANQK
>NZ_CP011456.1|WP_053538544.1|1709793_1710132_+|c-type-cytochrome
MKNIVSVLLIGIAIFTFAFSSPALAADAASGAALFKANCAQCHVGGGNLVNRAKTLKKEALEKYGMYSAEKIIAQVTKGQGAMPAFGNKLKVDQIENVAAYVLEQADNGWKK
>NZ_CP011456.1|WP_053538545.1|1710338_1711961_+|TonB-family-protein
MSLSGITIEQREKEAEALKTFLIFSFIGSLALHTGLLALAINKFFFKVPEVTNEPIEVTILETLPQKIIQPPVEIKSLAKINSGGGNEGGEVSIPTKTTISKIKSSVAPVSTQPQPKTTNNLISKQSPILTPPKSAIIPNSLKNNSIENTTPEPTIATIPTETKPIQKLDETSNTLASTEPQAETKPTEIPLLKSEIQPNISSNNIPSNSTTSIPVSQNRNILNNLGNHRWRNILGKDSGNGVGNNSGNGVGNSSGNGVGNSSGNGVGNSSGNGVGNTAKPENTPVATAPNPPTENSSKLNRADCLQCQIKYPERARRRGAEGNPEVAIDTDNKGNVTRVRLIRSSGDSELDEAAQKAAQEWKLTPTEAGREGVRASVNFAIKGSQRHRKLQERQIEKQREAINKKPEQEAAASTSIESRQRNRRKTNVIITDIPSENITRQRQESAPSKSKPVSLPRQSIEPEQPKQTEESPARRRSVQPVKSDTSSQSDEGRTERIQKSQRRLTEVLRRRQKSADSPPAESPAPLEPATTSPTESKSQ
>NZ_CP011456.1|WP_053538546.1|1712059_1712623_+|hypothetical-protein
MTPEDIAGTLTELFSAEVVKSIAPGSWQVETADFRLLVLLSEDNTWLRILLPIMPLQEAAAFMTQFLEANFDDTQETRYAVYDDVIWGVFQHNSGTLTNGDFANAIARLISLYQAGVHDVFNNLVETRIREIIKAAKQQGQSLEATMQNLDRFYAEGLLGDIDQNAQGREQVLAAWQRQLERLWMEM
>NZ_CP011456.1|WP_053538547.1|1712680_1713784_-|fatty-acid-desaturase
MNTLEQKAWMTQAEYAKNLRPLLPTEAFLPDINKLWILLINLAIMILGWGIANHLDDWNWYFLWLYLPLALVMANSVIVLLFSTHNFLHSRTVTNPWLRQIISLLGFTMLWMPPTLWKAVHNREHHNKTNSLEDPDRNYLDNQPKNWGKWIQNAFVPSSEVNPILLFIGMSHAWGVHTFRNLTSVLLFNNGKSKYPVVAFTVSGKEQRAIAVELLMIIAIHATILSYLEFHPIKLLLSYFLPIWIGYAGLIFYIYTNHMLCRMTNVNDPLINSLSIRVPKLFDVLHLNFSYHTEHHIFPGINSDYAPMVQELLQTYYPERFNLLNAGKAWELMMETPRHYKNDHTFTDWSGNKFVNCPILGINLSDL
>NZ_CP011456.1|WP_053538548.1|1713940_1714822_-|ACP-S-malonyltransferase
MTKTAWVFPGQGSQALGMGIDLLTLPSAKEKFIQAEEILGWSVIDICQSDIDTLSRTLYTQPSLYVIESIIADILREKGQQPDVVTGHSLGEYIALYVAGVFEWSAGLHLVKRRAELMDSAAGGMMAALMNFDREELEKVISATPDVVLANDNSPLQVVISGTPDAVQTVISQVKAKRAIPLKVSGAFHSHLMKAAAMEFQEVLDSVIFQSANVPVSSNVDPIPAVAAETLKQRLSQQMTGSVRWREICLQLVEDGIEKVVEIGPGNVLTGLVKRTAPSLILQNIRNAAELPE
>NZ_CP011456.1|WP_053538549.1|1714962_1715964_-|ketoacyl-ACP-synthase-III
MQNFFNGGIAITGSGSAVPATCLHNQELTQLVETSDEWIASRTGIRQRRLALPPDSLTSLATAASRQAITAAGITAADIDLILLATSTPDDLFGSACRVQGELGATKAVAFDLTAACSGFVFGLVTAAQYLRTGVYQNVLLIGADILSRWVDWQDRRSCVLFGDGAGAVVLQANKSDRLLGFCLKSDGSQNNCLNLAYNASSTELAPDIHVSTGKYHPITMNGKEVYRFAVQKVPEVIDKALFAANLKVENIDWLVLHQANQRIINSVAERLEIPKHKIISNVADYGNTSAASIPLALDEAVRAGKIKPNDIIATSGFGAGLSWGAAIFQWGR

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP011456_11

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011456_11

1894174-1894273

Orphan

Consensus_repeat	Method
AGGTTAAATTGATAAAGTGCGAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP011456_11

>merge|NZ_CP011456|11|1894174-1894273|CRISPRCasFinder
AGGTTAAATTGATAAAGTGCGATAGCGAAGCGCTCCGTAGGAATCGCTTGTTGGGTGGTGTTAGTGCGATCGTTTGTAGGTTAGATTGATAAAGTGCGAT

>NZ_CP011456|11|11|1894174-1894273|CRISPRCasFinder
AGGTTAAATTGATAAAGTGCGAT	AGCGAAGCGCTCCGTAGGAATCGCTTGTTGGGTGGTGTTAGTGCGATCGTTTGT
AGGTTAGATTGATAAAGTGCGAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011456.1\|WP_053538660.1\|1898458_1899325_-\|DUF2382-domain-containing-protein	unknown	unknown	gnl\|CDD\|226379
NZ_CP011456.1\|WP_053541227.1\|1901242_1902736_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053538657.1\|1895608_1896244_+\|DUF4276-family-protein	unknown	unknown	gnl\|CDD\|379470
NZ_CP011456.1\|WP_027402408.1\|1891717_1892014_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_015080100.1\|1890061_1890298_+\|DUF433-domain-containing-protein	unknown	unknown	gnl\|CDD\|225291
NZ_CP011456.1\|WP_053538654.1\|1889497_1889851_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|226653
NZ_CP011456.1\|WP_053538661.1\|1902746_1904132_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|349760
NZ_CP011456.1\|WP_053538653.1\|1888832_1889321_+\|DUF3368-domain-containing-protein	unknown	unknown	gnl\|CDD\|225269
NZ_CP011456.1\|WP_053538658.1\|1896751_1897102_+\|DUF5615-family-PIN-like-protein	unknown	unknown	gnl\|CDD\|226981
NZ_CP011456.1\|WP_015080101.1\|1897426_1897648_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053538655.1\|1892444_1893494_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|379114
NZ_CP011456.1\|WP_053538651.1\|1887902_1888145_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053541226.1\|1893499_1894006_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|173001
NZ_CP011456.1\|WP_053538659.1\|1897647_1898058_+\|type-II-toxin-antitoxin-system-VapC-family-toxin	unknown	unknown	gnl\|CDD\|350312
NZ_CP011456.1\|WP_053538656.1\|1894406_1895615_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|226984
NZ_CP011456.1\|WP_015080100.1\|1896518_1896755_+\|DUF433-domain-containing-protein	unknown	unknown	gnl\|CDD\|225291
NZ_CP011456.1\|WP_027402409.1\|1890294_1890645_+\|DUF5615-family-PIN-like-protein	unknown	unknown	gnl\|CDD\|226981
NZ_CP011456.1\|WP_039203471.1\|1899794_1900784_+\|PRC-barrel-domain-containing-protein	unknown	unknown	gnl\|CDD\|368352
NZ_CP011456.1\|WP_015080096.1\|1891305_1891710_-\|type-II-toxin-antitoxin-system-VapC-family-toxin	unknown	unknown	gnl\|CDD\|350311
NZ_CP011456.1\|WP_053538652.1\|1888584_1888836_+\|UPF0175-family-protein	unknown	unknown	gnl\|CDD\|225440

Protein	Function_ID	Function_description	E-value
NZ_CP011456.1\|WP_039203471.1\|1899794_1900784_+\|PRC-barrel-domain-containing-protein	gnl\|CDD\|368352	pfam05239, PRC, PRC-barrel domain. The PRC-barrel is an all beta barrel domain found in photosystem reaction centre subunit H of the purple bacteria and RNA metabolism proteins of the RimM group. PRC-barrels are approximately 80 residues long, and found widely represented in bacteria, archaea and plants. This domain is also present at the carboxyl terminus of the pan-bacterial protein RimM, which is involved in ribosomal maturation and processing of 16S rRNA. A family of small proteins conserved in all known euryarchaea are composed entirely of a single stand-alone copy of the domain.	0.00198383
NZ_CP011456.1\|WP_053538652.1\|1888584_1888836_+\|UPF0175-family-protein	gnl\|CDD\|225440	COG2886, COG2886, Uncharacterized small protein [Function unknown].	3.68175e-20
NZ_CP011456.1\|WP_015080100.1\|1890061_1890298_+\|DUF433-domain-containing-protein	gnl\|CDD\|225291	COG2442, COG2442, Uncharacterized conserved protein [Function unknown].	4.27106e-24
NZ_CP011456.1\|WP_053538654.1\|1889497_1889851_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|226653	COG4190, COG4190, Predicted transcriptional regulator [Transcription].	5.85367e-14
NZ_CP011456.1\|WP_053538661.1\|1902746_1904132_-\|AAA-family-ATPase	gnl\|CDD\|349760	cd02042, ParAB_family, partition proteins ParAB family. ParA and ParB of Caulobacter crescentus belong to a conserved family of bacterial proteins implicated in chromosome segregation. ParB binds to DNA sequences adjacent to the origin of replication and localizes to opposite cell poles shortly following the initiation of DNA replication. ParB regulates the ParA ATPase activity by promoting nucleotide exchange in a fashion reminiscent of the exchange factors of eukaryotic G proteins. ADP-bound ParA binds single-stranded DNA, whereas the ATP-bound form dissociates ParB from its DNA binding sites. Increasing the fraction of ParA-ADP in the cell inhibits cell division, suggesting that this simple nucleotide switch may regulate cytokinesis. ParA shares sequence similarity to a conserved and widespread family of ATPases which includes the repA protein of the repABC operon in Rhizobium etli symbiotic plasmid. This operon is involved in the plasmid replication and partition.	8.19282e-10
NZ_CP011456.1\|WP_053538655.1\|1892444_1893494_+\|AAA-family-ATPase	gnl\|CDD\|379114	pfam13304, AAA_21, AAA domain, putative AbiEii toxin, Type IV TA system. Several members are annotated as being of the abortive phage resistance system, in which case the family would be acting as the toxin for a type IV toxin-antitoxin resistance system.	1.28152e-15
NZ_CP011456.1\|WP_053538653.1\|1888832_1889321_+\|DUF3368-domain-containing-protein	gnl\|CDD\|225269	COG2405, COG2405, Predicted nucleic acid-binding protein, contains PIN domain [General function prediction only].	2.60469e-45
NZ_CP011456.1\|WP_027402409.1\|1890294_1890645_+\|DUF5615-family-PIN-like-protein	gnl\|CDD\|226981	COG4634, COG4634, Uncharacterized protein conserved in bacteria [Function unknown].	6.06663e-30
NZ_CP011456.1\|WP_053538657.1\|1895608_1896244_+\|DUF4276-family-protein	gnl\|CDD\|379470	pfam14103, DUF4276, Domain of unknown function (DUF4276). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and archaea. Proteins in this family are typically between 190 and 224 amino acids in length. There is a single completely conserved residue E that may be functionally important.	2.93903e-34
NZ_CP011456.1\|WP_053538660.1\|1898458_1899325_-\|DUF2382-domain-containing-protein	gnl\|CDD\|226379	COG3861, COG3861, Uncharacterized protein conserved in bacteria [Function unknown].	3.9747e-33
NZ_CP011456.1\|WP_053541226.1\|1893499_1894006_+\|hypothetical-protein	gnl\|CDD\|173001	PRK14535, cysS, cysteinyl-tRNA synthetase; Provisional.	1.85019e-17
NZ_CP011456.1\|WP_053538659.1\|1897647_1898058_+\|type-II-toxin-antitoxin-system-VapC-family-toxin	gnl\|CDD\|350312	cd18745, PIN_VapC4-5_FitB-like, uncharacterized subgroup of the PIN_VapC4-5_FitB-like subfamily of the PIN domain superfamily. The PIN_VapC4-5_FitB-like subfamily includes the Virulence associated protein C (VapC)-like PIN (PilT N terminus) domain of Mycobacterium tuberculosis VapC4 and VapC5 ribonuclease toxins of the VapBC toxin/antitoxin (TA) system, and Neisseria gonorrhoeae FitB toxin of the FitAB TA system. This subfamily belongs to the VapC-like family of the PIN domain nuclease superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	1.77946e-58
NZ_CP011456.1\|WP_053538656.1\|1894406_1895615_+\|AAA-family-ATPase	gnl\|CDD\|226984	COG4637, COG4637, Predicted ATPase [General function prediction only].	1.16821e-41
NZ_CP011456.1\|WP_053538658.1\|1896751_1897102_+\|DUF5615-family-PIN-like-protein	gnl\|CDD\|226981	COG4634, COG4634, Uncharacterized protein conserved in bacteria [Function unknown].	5.219e-29
NZ_CP011456.1\|WP_015080100.1\|1896518_1896755_+\|DUF433-domain-containing-protein	gnl\|CDD\|225291	COG2442, COG2442, Uncharacterized conserved protein [Function unknown].	4.27106e-24
NZ_CP011456.1\|WP_015080096.1\|1891305_1891710_-\|type-II-toxin-antitoxin-system-VapC-family-toxin	gnl\|CDD\|350311	cd18744, PIN_VapC4-5_FitB-like, uncharacterized subgroup of the PIN_VapC4-5_FitB-like subfamily of the PIN domain superfamily. The PIN_VapC4-5_FitB-like subfamily includes the Virulence associated protein C (VapC)-like PIN (PilT N terminus) domain of Mycobacterium tuberculosis VapC4 and VapC5 ribonuclease toxins of the VapBC toxin/antitoxin (TA) system, and Neisseria gonorrhoeae FitB toxin of the FitAB TA system. This subfamily belongs to the VapC-like family of the PIN domain nuclease superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	3.19532e-51

>NZ_CP011456.1|WP_053541226.1|1893499_1894006_+|hypothetical-protein
MNIQVDSLIFTFPDSWKVCKYDEWAFYRHQFSKMSPGIKAVDLLAIESQVIWLIEAKDYRQHPRTKTIDLADEVVQKVLYTLAAMLPAKIHASDISESNFAGEILKGQQLRVVLHLEQPVKTSKLFPRAIDPSKVQLKLRSLIKPIDPHPKVVESNQMQGLKWTVTEL
>NZ_CP011456.1|WP_053538655.1|1892444_1893494_+|AAA-family-ATPase
MLNNLNIKNFTVFPSANLQFSKHLNVIVGENGSGKTHLLKVAYSALATSWEESRKPTSSTPTKALMQTRLADKLINVFRPESLGRLARRKQGRERCDIKLLFEDKKFNFEFSFSTNSKTEVLIEQVPKGWLDTSPAYIPTRELLSIFPNFISVYEGHYLEFEETWRDTCILLGYPLQRGTKEKRIQELLAPLETSMGGSIELDKNGRFYLKNERGRFEMPLIAEGQRKLAMLARLIATGVLMDKGFLFWDEPEANLNPLLIKQVAQSIVSLSKIGIQVFIATHSLFLLRELEILMTDQQNIELNSRFFGLHFSDDGVVVNQGDTIDEIGDITTLDEELAQSDRFISSGV
>NZ_CP011456.1|WP_027402408.1|1891717_1892014_-|hypothetical-protein
MLSTDMKQESIIKRIENVVAILMEERPLFKEDLNYTKMVQDLVKVFKENFSLEEFSQISEESLKKRCSGIMALHLLAKIGEDFTPEQMAIFDDAVKRK
>NZ_CP011456.1|WP_015080096.1|1891305_1891710_-|type-II-toxin-antitoxin-system-VapC-family-toxin
MNYLLDTNIVSLALKQNSQILHKITISESKEEKIFISCITYFEIRRGFLAVDAPKQRARFEEFCQEYPIIFLDDLAILEKAAQIHANLRLRGVPIQTEDVLIAATAILKDLIVVSNDSDLARVEGLSLENWVEL
>NZ_CP011456.1|WP_027402409.1|1890294_1890645_+|DUF5615-family-PIN-like-protein
MKFLIDAQLPMRIANLLDNLGYDVIHTKNLPLKNATPDSEINKLSILEQRIVITKDKDFLDSFLIKQEPYKLLLITTGNISNKQIEQLFLQNITQIIELFLTYDFLEMTRDSLIIH
>NZ_CP011456.1|WP_015080100.1|1890061_1890298_+|DUF433-domain-containing-protein
MNNLLLNRITINHDICHGKPCIRGLRYPVEMILELLSSGMNIDDILEDYDDLEYEDILAVLSFATRLTQVKSILQLVS
>NZ_CP011456.1|WP_053538654.1|1889497_1889851_+|MarR-family-transcriptional-regulator
MKAIIEVAKGGSAIRAARQQIKDSEIGKPVNFRLSFESAKSLFSELTPARLDLLDTLSKTGPCSIYALAKTAERNYSNVHTDVNRLEELGLIERTEEDKISVPFESVEIFMPLAKAA
>NZ_CP011456.1|WP_053538653.1|1888832_1889321_+|DUF3368-domain-containing-protein
MIVVSDTSALSNLALVDHLGLLKAIYHQVIIPDVVASELVAASNPTISAILQLDWIQSQFLNNFQLANQLQQERGLDAGEANAIALALELQADDLLIDERLGRQEALRLGIPIIGILGILLVAKQRSLIPQVQPVMDALINRAGFRISPQLYQRILSLSQEP
>NZ_CP011456.1|WP_053538652.1|1888584_1888836_+|UPF0175-family-protein
MQITLNLPDSLSKTETFNQSEWLQEIAIALFQQQRISLSRASKIAGIDIMNFQKLLADRNICVHYDVEDFEEDVQHLRSRGWL
>NZ_CP011456.1|WP_053538651.1|1887902_1888145_+|hypothetical-protein
MHSMRVRFLRSASLSLIGKNGLLQIQLPETTEGTELDIILVYESASPTKTTTKLSDFYGCIQDETFIRHPQPEQAERELF
>NZ_CP011456.1|WP_053538656.1|1894406_1895615_+|AAA-family-ATPase
MEGKRFIHKIKLQNFLSYGSEGEEIELQPLNVLIGANTSGKSNLIEAIGILKATPTDLPVPFRKSGGINEFLWKGNKDTPIAEIKITVDYPQKSESLLLDYTLSFTTYDQKFDLVDEFIEPETAKEGFQFYYLNNYNGFRSFTVRDKDPLSGQERRSEQLLELHSIKSDQSVLSEIKDPSRYPEISYLSTEFSKISLYRSWQMGRDSELRKAQKADLPQHPLLEDGSNFGLFIKDLQYKGLSRKLIEYLKKFYETAEDLDVRIYGGTVQLFIREEDVIQPISATRLSDGTLRYLFLMALLLDPTPPPLICIEEPELGLHPDILPTIAELLIEASQRTQLIVTTHSDALVSALSEYPESVVVCERDNTGTHLRRLKPDKLKDWLENYTLGDLWRMGEIGGNRW
>NZ_CP011456.1|WP_053538657.1|1895608_1896244_+|DUF4276-family-protein
MVKEIRIYIEGGGDSKNQRSSLRKGFSKFFLKLVKEATTKNIKWNIIMCGTRNNAFRDFKNALKSHPDAFNVLLVDAEAPVNKKSPWEHLKFRDNWDKPTEVDDDNCHLMVQTMEAWFIADFATLKKFYGQGFKENAIPKNANVETIAKDNLEPTLKTATGRTTKGEYHKIKHASELLESLDVTQVRQASPYCDRLFNTLKSRIGYLQDES
>NZ_CP011456.1|WP_015080100.1|1896518_1896755_+|DUF433-domain-containing-protein
MNNLLLNRITINHDICHGKPCIRGLRYPVEMILELLSSGMNIDDILEDYDDLEYEDILAVLSFATRLTQVKSILQLVS
>NZ_CP011456.1|WP_053538658.1|1896751_1897102_+|DUF5615-family-PIN-like-protein
MKFLIDAQLPMRIANLLDNLGYDVIHTKNLPLKNATPDSEINKLSILEQRIVITKDKDFLDSFLIKQEPYKLLLITTGNISNKQIEQLFLQNITPIIELFLTYDFLEMTRDSLIIH
>NZ_CP011456.1|WP_015080101.1|1897426_1897648_+|hypothetical-protein
MQSMRVRSLIGKNGLLQIQLPETTEGTELDIILVYESASPTKTTTKLSDFYGCIQDETFIRHPQPEQAERELF
>NZ_CP011456.1|WP_053538659.1|1897647_1898058_+|type-II-toxin-antitoxin-system-VapC-family-toxin
MIYLLDTNACIIYLKGKNFHLKQKLDNIPLSEIAVCSVVKGELFYGSIRSANPERNLTLQQGFLSQFVSLPFDDQSALIFGEIRAQLAANGTPIGAYDLQIAAIALANNLILVTHNTKEFSRIPQLQLEDWEIDIL
>NZ_CP011456.1|WP_053538660.1|1898458_1899325_-|DUF2382-domain-containing-protein
MALYKIEDFTADSNYDSPGLDGSEVEKIKHFDVYSDIDDDKVGTIKYILVDDSGRLRYLVVDTGFWFFGRQVLLPIGRSRIDYDKRRVYANKLTKQQVENLPDFKDLQEIDYDYEERVRGVYRRPRGQAPLESSTPLESPIAVDSPLVSHERTIVTPAVPVERNTYRYEEEPNLYNVNEQDHQNLKLYEERLVANKSRVKTGEVTVSKQSYTEMVTVSVPVQRERIVIEHTDAETGVKTVSLTEADLGEGGVKIKKIVEQDTVEAEDTIRREELDVTRNDQRVTERRN
>NZ_CP011456.1|WP_039203471.1|1899794_1900784_+|PRC-barrel-domain-containing-protein
MTSEQIVRRSDILNTQVITRDNGKRLGIVSQIWVDVDQREVVAISLRDSLISISSLPRNMYLNSINQIGDVILVDNEDVIEDVEVEILSNLMNWEVITETGEVLGKVRGFKFNGETGKIYSIVIASLGLPQIPDQFLSTYELSIDEVVSTGPSRLIVFEGAEERVNQLTVGVLERLGIGKAPWERDAEEEFGYSAPRTVAPSNQLPSGVPLQPPRPKVRIPEPIAQEEEWTEDYVEEERPQRQVMKARSYESIQYEEDEEDNWSDATVRDSYQEAPRAEAKPAKKTYADQYDDYDDDLDGDAWDDAPKPVNIPKKVKERQVEYEEEGGY
>NZ_CP011456.1|WP_053541227.1|1901242_1902736_-|hypothetical-protein
MSEINKHKLLELIANIAPGKGIAEHESNDHETFLKNFLPIADYRHALEPNILLILGGRGVGKTELFRLLAIPSGRAALVESLGIRSLPTLSKTTWVAGFCKDKKQFPAPESVESQMDKATNIEWRGFWIGLILGVLLQQEDFKFKDFLLEQLETAIVNILRDDLSLLSIWQPIVNQNLEKLNSVLDKLDQKLIETDDWLFVTYDELDRLVVSYTALASPIRQLLALWLDRWRRWDRIRPKIFLRTDLFREDFLNFPDASKLQGHQVRLEWKTSWLYQLLVKRLANAGSEMTEYLQNIPELITENKTGLGWSVTSNEKLFEELIERMIGKYMGVNAKKGITYCWIPNHLQDADGRIAPRSFLKLFVLAAELRIQQHSTVEQNMVLLQPSDLQGALIDTSKARIEELAQEEYPWLESLKTSLAELVVPIEKDKFLEAVESTNWSEKPEKQPPVINPEEILKYLLQLGIVESRSDGRINMPEIYMYGFKVKRKGGVKRPK
>NZ_CP011456.1|WP_053538661.1|1902746_1904132_-|AAA-family-ATPase
MISFSETFDKVRECFEEQSIVDALIPKLESVTIIRDVNGKIRIFLESLDNNPIEESETTELNTLLSTQLGKYYGNDIWLPRRNNDAYQSLIKTIKDERVFASWDNGSSPRWYILERHIAKQAWIDNNVGEQPWTEAVVYQKYKPAIISFFSFKGGVGRTSSLVATALTLARNGHRVAIVDLDLEAPGLATIFSPDNPDNPNNPNNPGVIDYLLEKKIQEQDWKLRTHLISINERILLDDNGESIQLLPAGTVDKNYLEKLARLDFQNLVNGELESTMVSMLKELESAVRPLDFILMDARAGFHDIGGLAIAKLSHAAVIFGTQSRQSWAGLTHVIRHLASPGVDERLPLILVHSMAPATGIPGRETELTEFREQAYDLFRENYYSEDEDVPDANNREEPFFPLVVPYQESLRGDIALFSRNSTPEESTRLSKLAEIMTNSPYKEIAEKLCNLFGREFQKNN

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP011456_12

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011456_12

1896264-1896377

Orphan

Consensus_repeat	Method
GTGCGATAGCGAAGCGCGACCTAGGAATCGCTC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP011456_12

>merge|NZ_CP011456|12|1896264-1896377|CRISPRCasFinder
GTGCGATAGCGAAGCGCGACCTAGGAATCGCTCATAGGTTAGATTGATAAAGTGCGATTGCTTGTTGGGTGGTGTTAGGAAGTGCGATAGCGAAGCGCGACCTAGGAATCGCTC

>NZ_CP011456|12|12|1896264-1896377|CRISPRCasFinder
GTGCGATAGCGAAGCGCGACCTAGGAATCGCTC	ATAGGTTAGATTGATAAAGTGCGATTGCTTGTTGGGTGGTGTTAGGAA
GTGCGATAGCGAAGCGCGACCTAGGAATCGCTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011456.1\|WP_027402408.1\|1891717_1892014_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_039203471.1\|1899794_1900784_+\|PRC-barrel-domain-containing-protein	unknown	unknown	gnl\|CDD\|368352
NZ_CP011456.1\|WP_053541227.1\|1901242_1902736_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053538657.1\|1895608_1896244_+\|DUF4276-family-protein	unknown	unknown	gnl\|CDD\|379470
NZ_CP011456.1\|WP_053538656.1\|1894406_1895615_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|226984
NZ_CP011456.1\|WP_015080100.1\|1890061_1890298_+\|DUF433-domain-containing-protein	unknown	unknown	gnl\|CDD\|225291
NZ_CP011456.1\|WP_053538654.1\|1889497_1889851_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|226653
NZ_CP011456.1\|WP_053538661.1\|1902746_1904132_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|349760
NZ_CP011456.1\|WP_053538655.1\|1892444_1893494_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|379114
NZ_CP011456.1\|WP_053538653.1\|1888832_1889321_+\|DUF3368-domain-containing-protein	unknown	unknown	gnl\|CDD\|225269
NZ_CP011456.1\|WP_053538658.1\|1896751_1897102_+\|DUF5615-family-PIN-like-protein	unknown	unknown	gnl\|CDD\|226981
NZ_CP011456.1\|WP_015080101.1\|1897426_1897648_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053538662.1\|1904138_1904570_-\|HEPN-domain-containing-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_015080100.1\|1896518_1896755_+\|DUF433-domain-containing-protein	unknown	unknown	gnl\|CDD\|225291
NZ_CP011456.1\|WP_053538660.1\|1898458_1899325_-\|DUF2382-domain-containing-protein	unknown	unknown	gnl\|CDD\|226379
NZ_CP011456.1\|WP_053541226.1\|1893499_1894006_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|173001
NZ_CP011456.1\|WP_053538659.1\|1897647_1898058_+\|type-II-toxin-antitoxin-system-VapC-family-toxin	unknown	unknown	gnl\|CDD\|350312
NZ_CP011456.1\|WP_053538663.1\|1905282_1906470_-\|alanine-racemase	unknown	unknown	gnl\|CDD\|234600
NZ_CP011456.1\|WP_027402409.1\|1890294_1890645_+\|DUF5615-family-PIN-like-protein	unknown	unknown	gnl\|CDD\|226981
NZ_CP011456.1\|WP_015080096.1\|1891305_1891710_-\|type-II-toxin-antitoxin-system-VapC-family-toxin	unknown	unknown	gnl\|CDD\|350311

Protein	Function_ID	Function_description	E-value
NZ_CP011456.1\|WP_039203471.1\|1899794_1900784_+\|PRC-barrel-domain-containing-protein	gnl\|CDD\|368352	pfam05239, PRC, PRC-barrel domain. The PRC-barrel is an all beta barrel domain found in photosystem reaction centre subunit H of the purple bacteria and RNA metabolism proteins of the RimM group. PRC-barrels are approximately 80 residues long, and found widely represented in bacteria, archaea and plants. This domain is also present at the carboxyl terminus of the pan-bacterial protein RimM, which is involved in ribosomal maturation and processing of 16S rRNA. A family of small proteins conserved in all known euryarchaea are composed entirely of a single stand-alone copy of the domain.	0.00198383
NZ_CP011456.1\|WP_053538656.1\|1894406_1895615_+\|AAA-family-ATPase	gnl\|CDD\|226984	COG4637, COG4637, Predicted ATPase [General function prediction only].	1.16821e-41
NZ_CP011456.1\|WP_015080100.1\|1890061_1890298_+\|DUF433-domain-containing-protein	gnl\|CDD\|225291	COG2442, COG2442, Uncharacterized conserved protein [Function unknown].	4.27106e-24
NZ_CP011456.1\|WP_053538654.1\|1889497_1889851_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|226653	COG4190, COG4190, Predicted transcriptional regulator [Transcription].	5.85367e-14
NZ_CP011456.1\|WP_053538661.1\|1902746_1904132_-\|AAA-family-ATPase	gnl\|CDD\|349760	cd02042, ParAB_family, partition proteins ParAB family. ParA and ParB of Caulobacter crescentus belong to a conserved family of bacterial proteins implicated in chromosome segregation. ParB binds to DNA sequences adjacent to the origin of replication and localizes to opposite cell poles shortly following the initiation of DNA replication. ParB regulates the ParA ATPase activity by promoting nucleotide exchange in a fashion reminiscent of the exchange factors of eukaryotic G proteins. ADP-bound ParA binds single-stranded DNA, whereas the ATP-bound form dissociates ParB from its DNA binding sites. Increasing the fraction of ParA-ADP in the cell inhibits cell division, suggesting that this simple nucleotide switch may regulate cytokinesis. ParA shares sequence similarity to a conserved and widespread family of ATPases which includes the repA protein of the repABC operon in Rhizobium etli symbiotic plasmid. This operon is involved in the plasmid replication and partition.	8.19282e-10
NZ_CP011456.1\|WP_053538655.1\|1892444_1893494_+\|AAA-family-ATPase	gnl\|CDD\|379114	pfam13304, AAA_21, AAA domain, putative AbiEii toxin, Type IV TA system. Several members are annotated as being of the abortive phage resistance system, in which case the family would be acting as the toxin for a type IV toxin-antitoxin resistance system.	1.28152e-15
NZ_CP011456.1\|WP_015080096.1\|1891305_1891710_-\|type-II-toxin-antitoxin-system-VapC-family-toxin	gnl\|CDD\|350311	cd18744, PIN_VapC4-5_FitB-like, uncharacterized subgroup of the PIN_VapC4-5_FitB-like subfamily of the PIN domain superfamily. The PIN_VapC4-5_FitB-like subfamily includes the Virulence associated protein C (VapC)-like PIN (PilT N terminus) domain of Mycobacterium tuberculosis VapC4 and VapC5 ribonuclease toxins of the VapBC toxin/antitoxin (TA) system, and Neisseria gonorrhoeae FitB toxin of the FitAB TA system. This subfamily belongs to the VapC-like family of the PIN domain nuclease superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	3.19532e-51
NZ_CP011456.1\|WP_053538658.1\|1896751_1897102_+\|DUF5615-family-PIN-like-protein	gnl\|CDD\|226981	COG4634, COG4634, Uncharacterized protein conserved in bacteria [Function unknown].	5.219e-29
NZ_CP011456.1\|WP_053538653.1\|1888832_1889321_+\|DUF3368-domain-containing-protein	gnl\|CDD\|225269	COG2405, COG2405, Predicted nucleic acid-binding protein, contains PIN domain [General function prediction only].	2.60469e-45
NZ_CP011456.1\|WP_015080100.1\|1896518_1896755_+\|DUF433-domain-containing-protein	gnl\|CDD\|225291	COG2442, COG2442, Uncharacterized conserved protein [Function unknown].	4.27106e-24
NZ_CP011456.1\|WP_053538660.1\|1898458_1899325_-\|DUF2382-domain-containing-protein	gnl\|CDD\|226379	COG3861, COG3861, Uncharacterized protein conserved in bacteria [Function unknown].	3.9747e-33
NZ_CP011456.1\|WP_053541226.1\|1893499_1894006_+\|hypothetical-protein	gnl\|CDD\|173001	PRK14535, cysS, cysteinyl-tRNA synthetase; Provisional.	1.85019e-17
NZ_CP011456.1\|WP_053538659.1\|1897647_1898058_+\|type-II-toxin-antitoxin-system-VapC-family-toxin	gnl\|CDD\|350312	cd18745, PIN_VapC4-5_FitB-like, uncharacterized subgroup of the PIN_VapC4-5_FitB-like subfamily of the PIN domain superfamily. The PIN_VapC4-5_FitB-like subfamily includes the Virulence associated protein C (VapC)-like PIN (PilT N terminus) domain of Mycobacterium tuberculosis VapC4 and VapC5 ribonuclease toxins of the VapBC toxin/antitoxin (TA) system, and Neisseria gonorrhoeae FitB toxin of the FitAB TA system. This subfamily belongs to the VapC-like family of the PIN domain nuclease superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	1.77946e-58
NZ_CP011456.1\|WP_053538663.1\|1905282_1906470_-\|alanine-racemase	gnl\|CDD\|234600	PRK00053, alr, alanine racemase; Reviewed.	0
NZ_CP011456.1\|WP_053538657.1\|1895608_1896244_+\|DUF4276-family-protein	gnl\|CDD\|379470	pfam14103, DUF4276, Domain of unknown function (DUF4276). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and archaea. Proteins in this family are typically between 190 and 224 amino acids in length. There is a single completely conserved residue E that may be functionally important.	2.93903e-34
NZ_CP011456.1\|WP_027402409.1\|1890294_1890645_+\|DUF5615-family-PIN-like-protein	gnl\|CDD\|226981	COG4634, COG4634, Uncharacterized protein conserved in bacteria [Function unknown].	6.06663e-30

>NZ_CP011456.1|WP_053538657.1|1895608_1896244_+|DUF4276-family-protein
MVKEIRIYIEGGGDSKNQRSSLRKGFSKFFLKLVKEATTKNIKWNIIMCGTRNNAFRDFKNALKSHPDAFNVLLVDAEAPVNKKSPWEHLKFRDNWDKPTEVDDDNCHLMVQTMEAWFIADFATLKKFYGQGFKENAIPKNANVETIAKDNLEPTLKTATGRTTKGEYHKIKHASELLESLDVTQVRQASPYCDRLFNTLKSRIGYLQDES
>NZ_CP011456.1|WP_053538656.1|1894406_1895615_+|AAA-family-ATPase
MEGKRFIHKIKLQNFLSYGSEGEEIELQPLNVLIGANTSGKSNLIEAIGILKATPTDLPVPFRKSGGINEFLWKGNKDTPIAEIKITVDYPQKSESLLLDYTLSFTTYDQKFDLVDEFIEPETAKEGFQFYYLNNYNGFRSFTVRDKDPLSGQERRSEQLLELHSIKSDQSVLSEIKDPSRYPEISYLSTEFSKISLYRSWQMGRDSELRKAQKADLPQHPLLEDGSNFGLFIKDLQYKGLSRKLIEYLKKFYETAEDLDVRIYGGTVQLFIREEDVIQPISATRLSDGTLRYLFLMALLLDPTPPPLICIEEPELGLHPDILPTIAELLIEASQRTQLIVTTHSDALVSALSEYPESVVVCERDNTGTHLRRLKPDKLKDWLENYTLGDLWRMGEIGGNRW
>NZ_CP011456.1|WP_053541226.1|1893499_1894006_+|hypothetical-protein
MNIQVDSLIFTFPDSWKVCKYDEWAFYRHQFSKMSPGIKAVDLLAIESQVIWLIEAKDYRQHPRTKTIDLADEVVQKVLYTLAAMLPAKIHASDISESNFAGEILKGQQLRVVLHLEQPVKTSKLFPRAIDPSKVQLKLRSLIKPIDPHPKVVESNQMQGLKWTVTEL
>NZ_CP011456.1|WP_053538655.1|1892444_1893494_+|AAA-family-ATPase
MLNNLNIKNFTVFPSANLQFSKHLNVIVGENGSGKTHLLKVAYSALATSWEESRKPTSSTPTKALMQTRLADKLINVFRPESLGRLARRKQGRERCDIKLLFEDKKFNFEFSFSTNSKTEVLIEQVPKGWLDTSPAYIPTRELLSIFPNFISVYEGHYLEFEETWRDTCILLGYPLQRGTKEKRIQELLAPLETSMGGSIELDKNGRFYLKNERGRFEMPLIAEGQRKLAMLARLIATGVLMDKGFLFWDEPEANLNPLLIKQVAQSIVSLSKIGIQVFIATHSLFLLRELEILMTDQQNIELNSRFFGLHFSDDGVVVNQGDTIDEIGDITTLDEELAQSDRFISSGV
>NZ_CP011456.1|WP_027402408.1|1891717_1892014_-|hypothetical-protein
MLSTDMKQESIIKRIENVVAILMEERPLFKEDLNYTKMVQDLVKVFKENFSLEEFSQISEESLKKRCSGIMALHLLAKIGEDFTPEQMAIFDDAVKRK
>NZ_CP011456.1|WP_015080096.1|1891305_1891710_-|type-II-toxin-antitoxin-system-VapC-family-toxin
MNYLLDTNIVSLALKQNSQILHKITISESKEEKIFISCITYFEIRRGFLAVDAPKQRARFEEFCQEYPIIFLDDLAILEKAAQIHANLRLRGVPIQTEDVLIAATAILKDLIVVSNDSDLARVEGLSLENWVEL
>NZ_CP011456.1|WP_027402409.1|1890294_1890645_+|DUF5615-family-PIN-like-protein
MKFLIDAQLPMRIANLLDNLGYDVIHTKNLPLKNATPDSEINKLSILEQRIVITKDKDFLDSFLIKQEPYKLLLITTGNISNKQIEQLFLQNITQIIELFLTYDFLEMTRDSLIIH
>NZ_CP011456.1|WP_015080100.1|1890061_1890298_+|DUF433-domain-containing-protein
MNNLLLNRITINHDICHGKPCIRGLRYPVEMILELLSSGMNIDDILEDYDDLEYEDILAVLSFATRLTQVKSILQLVS
>NZ_CP011456.1|WP_053538654.1|1889497_1889851_+|MarR-family-transcriptional-regulator
MKAIIEVAKGGSAIRAARQQIKDSEIGKPVNFRLSFESAKSLFSELTPARLDLLDTLSKTGPCSIYALAKTAERNYSNVHTDVNRLEELGLIERTEEDKISVPFESVEIFMPLAKAA
>NZ_CP011456.1|WP_053538653.1|1888832_1889321_+|DUF3368-domain-containing-protein
MIVVSDTSALSNLALVDHLGLLKAIYHQVIIPDVVASELVAASNPTISAILQLDWIQSQFLNNFQLANQLQQERGLDAGEANAIALALELQADDLLIDERLGRQEALRLGIPIIGILGILLVAKQRSLIPQVQPVMDALINRAGFRISPQLYQRILSLSQEP
>NZ_CP011456.1|WP_015080100.1|1896518_1896755_+|DUF433-domain-containing-protein
MNNLLLNRITINHDICHGKPCIRGLRYPVEMILELLSSGMNIDDILEDYDDLEYEDILAVLSFATRLTQVKSILQLVS
>NZ_CP011456.1|WP_053538658.1|1896751_1897102_+|DUF5615-family-PIN-like-protein
MKFLIDAQLPMRIANLLDNLGYDVIHTKNLPLKNATPDSEINKLSILEQRIVITKDKDFLDSFLIKQEPYKLLLITTGNISNKQIEQLFLQNITPIIELFLTYDFLEMTRDSLIIH
>NZ_CP011456.1|WP_015080101.1|1897426_1897648_+|hypothetical-protein
MQSMRVRSLIGKNGLLQIQLPETTEGTELDIILVYESASPTKTTTKLSDFYGCIQDETFIRHPQPEQAERELF
>NZ_CP011456.1|WP_053538659.1|1897647_1898058_+|type-II-toxin-antitoxin-system-VapC-family-toxin
MIYLLDTNACIIYLKGKNFHLKQKLDNIPLSEIAVCSVVKGELFYGSIRSANPERNLTLQQGFLSQFVSLPFDDQSALIFGEIRAQLAANGTPIGAYDLQIAAIALANNLILVTHNTKEFSRIPQLQLEDWEIDIL
>NZ_CP011456.1|WP_053538660.1|1898458_1899325_-|DUF2382-domain-containing-protein
MALYKIEDFTADSNYDSPGLDGSEVEKIKHFDVYSDIDDDKVGTIKYILVDDSGRLRYLVVDTGFWFFGRQVLLPIGRSRIDYDKRRVYANKLTKQQVENLPDFKDLQEIDYDYEERVRGVYRRPRGQAPLESSTPLESPIAVDSPLVSHERTIVTPAVPVERNTYRYEEEPNLYNVNEQDHQNLKLYEERLVANKSRVKTGEVTVSKQSYTEMVTVSVPVQRERIVIEHTDAETGVKTVSLTEADLGEGGVKIKKIVEQDTVEAEDTIRREELDVTRNDQRVTERRN
>NZ_CP011456.1|WP_039203471.1|1899794_1900784_+|PRC-barrel-domain-containing-protein
MTSEQIVRRSDILNTQVITRDNGKRLGIVSQIWVDVDQREVVAISLRDSLISISSLPRNMYLNSINQIGDVILVDNEDVIEDVEVEILSNLMNWEVITETGEVLGKVRGFKFNGETGKIYSIVIASLGLPQIPDQFLSTYELSIDEVVSTGPSRLIVFEGAEERVNQLTVGVLERLGIGKAPWERDAEEEFGYSAPRTVAPSNQLPSGVPLQPPRPKVRIPEPIAQEEEWTEDYVEEERPQRQVMKARSYESIQYEEDEEDNWSDATVRDSYQEAPRAEAKPAKKTYADQYDDYDDDLDGDAWDDAPKPVNIPKKVKERQVEYEEEGGY
>NZ_CP011456.1|WP_053541227.1|1901242_1902736_-|hypothetical-protein
MSEINKHKLLELIANIAPGKGIAEHESNDHETFLKNFLPIADYRHALEPNILLILGGRGVGKTELFRLLAIPSGRAALVESLGIRSLPTLSKTTWVAGFCKDKKQFPAPESVESQMDKATNIEWRGFWIGLILGVLLQQEDFKFKDFLLEQLETAIVNILRDDLSLLSIWQPIVNQNLEKLNSVLDKLDQKLIETDDWLFVTYDELDRLVVSYTALASPIRQLLALWLDRWRRWDRIRPKIFLRTDLFREDFLNFPDASKLQGHQVRLEWKTSWLYQLLVKRLANAGSEMTEYLQNIPELITENKTGLGWSVTSNEKLFEELIERMIGKYMGVNAKKGITYCWIPNHLQDADGRIAPRSFLKLFVLAAELRIQQHSTVEQNMVLLQPSDLQGALIDTSKARIEELAQEEYPWLESLKTSLAELVVPIEKDKFLEAVESTNWSEKPEKQPPVINPEEILKYLLQLGIVESRSDGRINMPEIYMYGFKVKRKGGVKRPK
>NZ_CP011456.1|WP_053538661.1|1902746_1904132_-|AAA-family-ATPase
MISFSETFDKVRECFEEQSIVDALIPKLESVTIIRDVNGKIRIFLESLDNNPIEESETTELNTLLSTQLGKYYGNDIWLPRRNNDAYQSLIKTIKDERVFASWDNGSSPRWYILERHIAKQAWIDNNVGEQPWTEAVVYQKYKPAIISFFSFKGGVGRTSSLVATALTLARNGHRVAIVDLDLEAPGLATIFSPDNPDNPNNPNNPGVIDYLLEKKIQEQDWKLRTHLISINERILLDDNGESIQLLPAGTVDKNYLEKLARLDFQNLVNGELESTMVSMLKELESAVRPLDFILMDARAGFHDIGGLAIAKLSHAAVIFGTQSRQSWAGLTHVIRHLASPGVDERLPLILVHSMAPATGIPGRETELTEFREQAYDLFRENYYSEDEDVPDANNREEPFFPLVVPYQESLRGDIALFSRNSTPEESTRLSKLAEIMTNSPYKEIAEKLCNLFGREFQKNN
>NZ_CP011456.1|WP_053538662.1|1904138_1904570_-|HEPN-domain-containing-protein
MQDSFSNSAGRHLQDAQILLGEQRWDNAVYLAGYVVECCFKVLVEQNFKHDQDAAKKYNHNLAELDGRLMERLRVIYPVLDKQLPTSRIVDTVLAEKHPDRRYFKSGHWTEAQATTAVQRAEEIYREIISKLVLDGSILSKDI
>NZ_CP011456.1|WP_053538663.1|1905282_1906470_-|alanine-racemase
MLSRKQTPIFANNQECDAYAWFSQRAWVEIDLGALSHNVKQLVKFLSPCTKLMAVVKADAYGHGAVTVARTALEAGASWLGVATVPEGIQLREDGIKAPILILGATNTPEQIQAIAHWQLQPTLCSPKQALEFSNTLETINHNSSLSVHIKLDTGMSRLGTNWQQAADFVQLVQGLPHLNIASIYSHLATADSLDTTVMKEQHRRFAEATAHIKAKGIKIPSLHLANSAATLTNPELHYDMVRVGLAIYGLYPATHLQNQIKLQPVLQLKARVTQVKTIAAGTGVSYGHHFIASKEMRLAVVGIGYADGVPRSLSNQMQVLIRGQRIPQVGAITMDQIMLDVSSIPDLQEGEIVTLLGEQGKEQISADDWANCLNTISWEILCGFKHRLPRVAVM

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Crispr_ID: NZ_CP011456_13

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011456_13

2071045-2071157

Orphan

Consensus_repeat	Method
AGGAAAAATACATCCTGTTCATCCTTAAATCCTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP011456_13

>merge|NZ_CP011456|13|2071045-2071157|CRISPRCasFinder
AGGAAAAATACATCCTGTTCATCCTTAAATCCTGGACATCCTGATTCAGACATGATCAAGATTTTTCCGAGTCGAGAACAGGAAAAATACATCTTGTTCATCCTTAAATCCTG

>NZ_CP011456|13|13|2071045-2071157|CRISPRCasFinder
AGGAAAAATACATCCTGTTCATCCTTAAATCCTG	GACATCCTGATTCAGACATGATCAAGATTTTTCCGAGTCGAGAAC
AGGAAAAATACATCTTGTTCATCCTTAAATCCTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011456.1\|WP_053538788.1\|2078063_2081537_+\|transcription-repair-coupling-factor	unknown	unknown	gnl\|CDD\|224118
NZ_CP011456.1\|WP_053538789.1\|2081644_2082922_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|379114
NZ_CP011456.1\|WP_053538782.1\|2067179_2068577_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|379050
NZ_CP011456.1\|WP_053538783.1\|2068910_2069840_-\|TIGR04168-family-protein	unknown	unknown	gnl\|CDD\|275026
NZ_CP011456.1\|WP_053538781.1\|2066620_2067214_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053538777.1\|2061235_2061499_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237171
NZ_CP011456.1\|WP_053538776.1\|2059764_2060247_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|376811
NZ_CP011456.1\|WP_053538790.1\|2082928_2083678_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053541234.1\|2075415_2076138_-\|cyclase-family-protein	unknown	unknown	gnl\|CDD\|224790
NZ_CP011456.1\|WP_027401350.1\|2061927_2062791_+\|cyanophycinase	unknown	unknown	gnl\|CDD\|226693
NZ_CP011456.1\|WP_081424192.1\|2076476_2077784_-\|HlyC/CorC-family-transporter	unknown	unknown	gnl\|CDD\|224173
NZ_CP011456.1\|WP_015083627.1\|2074488_2074683_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053538780.1\|2066234_2066483_-\|plasmid-stability-protein	unknown	unknown	gnl\|CDD\|172484
NZ_CP011456.1\|WP_053538791.1\|2083958_2084516_+\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|99749
NZ_CP011456.1\|WP_053538785.1\|2071201_2072092_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053538792.1\|2084573_2088407_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053538779.1\|2065809_2066238_-\|type-II-toxin-antitoxin-system-VapC-family-toxin	unknown	unknown	gnl\|CDD\|350298
NZ_CP011456.1\|WP_081424191.1\|2062969_2065666_+\|cyanophycin-synthetase	unknown	unknown	gnl\|CDD\|273950
NZ_CP011456.1\|WP_053538786.1\|2072424_2073558_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238866
NZ_CP011456.1\|WP_053538784.1\|2069990_2070956_+\|quinolinate-synthase-NadA	unknown	unknown	gnl\|CDD\|236489

Protein	Function_ID	Function_description	E-value
NZ_CP011456.1\|WP_053538788.1\|2078063_2081537_+\|transcription-repair-coupling-factor	gnl\|CDD\|224118	COG1197, Mfd, Transcription-repair coupling factor (superfamily II helicase) [DNA replication, recombination, and repair / Transcription].	0
NZ_CP011456.1\|WP_053538789.1\|2081644_2082922_+\|AAA-family-ATPase	gnl\|CDD\|379114	pfam13304, AAA_21, AAA domain, putative AbiEii toxin, Type IV TA system. Several members are annotated as being of the abortive phage resistance system, in which case the family would be acting as the toxin for a type IV toxin-antitoxin resistance system.	2.6428e-18
NZ_CP011456.1\|WP_053538782.1\|2067179_2068577_-\|AAA-family-ATPase	gnl\|CDD\|379050	pfam13175, AAA_15, AAA ATPase domain. This family of domains contain a P-loop motif that is characteristic of the AAA superfamily.	1.25289e-15
NZ_CP011456.1\|WP_053538783.1\|2068910_2069840_-\|TIGR04168-family-protein	gnl\|CDD\|275026	TIGR04168, Ser/Thr_protein_phosphatase_family_protein, TIGR04168 family protein. Members of this uncharacterized protein family are restricted, in 49 of 50 genomes, to organisms with a family TIGR04167 radical SAM protein, which occasionally is a selenoprotein.	1.81261e-169
NZ_CP011456.1\|WP_081424192.1\|2076476_2077784_-\|HlyC/CorC-family-transporter	gnl\|CDD\|224173	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only].	7.37477e-158
NZ_CP011456.1\|WP_053538777.1\|2061235_2061499_-\|hypothetical-protein	gnl\|CDD\|237171	PRK12678, PRK12678, transcription termination factor Rho; Provisional.	0.00626785
NZ_CP011456.1\|WP_053538776.1\|2059764_2060247_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|376811	pfam02542, YgbB, YgbB family. The ygbB protein is a putative enzyme of deoxy-xylulose pathway (terpenoid biosynthesis).	4.55765e-98
NZ_CP011456.1\|WP_053541234.1\|2075415_2076138_-\|cyclase-family-protein	gnl\|CDD\|224790	COG1878, COG1878, Kynurenine formamidase [Amino acid transport and metabolism].	9.62641e-69
NZ_CP011456.1\|WP_027401350.1\|2061927_2062791_+\|cyanophycinase	gnl\|CDD\|226693	COG4242, CphB, Cyanophycinase and related exopeptidases [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism].	1.62161e-153
NZ_CP011456.1\|WP_053538780.1\|2066234_2066483_-\|plasmid-stability-protein	gnl\|CDD\|172484	PRK13982, PRK13982, bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional.	2.04469e-10
NZ_CP011456.1\|WP_053538791.1\|2083958_2084516_+\|Uma2-family-endonuclease	gnl\|CDD\|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	6.26796e-34
NZ_CP011456.1\|WP_053538779.1\|2065809_2066238_-\|type-II-toxin-antitoxin-system-VapC-family-toxin	gnl\|CDD\|350298	cd18731, PIN_NgFitB-like, VapC-like PIN domain of Neisseria gonorrhoeae FitB and related proteins. This subfamily includes the Virulence associated protein C (VapC)-like PIN (PilT N terminus) domain of Neisseria gonorrhoeae FitB toxin of the FitAB toxin/antitoxin (TA) system. This subfamily belongs to the VapC-like family of the PIN domain nuclease superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. In N. gonorrhoeae, FitA and FitB form a heterodimer: FitA is the DNA binding subunit and FitB contains a ribonuclease activity that is blocked by the presence of FitA. A tetramer of FitAB heterodimers binds DNA from the fitAB upstream promoter region with high affinity. This results in both sequestration of FitAB and repression of fitAB transcription. It is thought that FitAB release from the DNA and subsequent dissociation both slows N. gonorrhoeae replication and transcytosis by an as yet undefined mechanism. The toxin M. tuberculosis VapC is a structural homolog of N. gonorrhoeae FitB, but their antitoxin partners, VapB and FitA, respectively, differ structurally. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	1.00123e-77
NZ_CP011456.1\|WP_081424191.1\|2062969_2065666_+\|cyanophycin-synthetase	gnl\|CDD\|273950	TIGR02068, Cyanophycin_synthetase, cyanophycin synthetase. Cyanophycin is an insoluble storage polymer for carbon, nitrogen, and energy, found in most Cyanobacteria. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine. The polymer is made by this enzyme, cyanophycin synthetase, and degraded by cyanophycinase. Heterologously expressed cyanophycin synthetase in E. coli produces a closely related, water-soluble polymer with some Arg replaced by Lys. It is unclear whether enzymes that produce soluble cyanophycin-like polymers in vivo in non-Cyanobacterial species should be designated as cyanophycin synthetase itself or as a related enzyme. This model makes the designation as cyanophycin synthetase. Cyanophycin synthesis is analogous to polyhydroxyalkanoic acid (PHA) biosynthesis, except that PHA polymers lack nitrogen and may be made under nitrogen-limiting conditions. [Cellular processes, Biosynthesis of natural products].	0
NZ_CP011456.1\|WP_053538786.1\|2072424_2073558_-\|hypothetical-protein	gnl\|CDD\|238866	cd01828, sialate_O-acetylesterase_like2, sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.	3.71796e-62
NZ_CP011456.1\|WP_053538784.1\|2069990_2070956_+\|quinolinate-synthase-NadA	gnl\|CDD\|236489	PRK09375, PRK09375, quinolinate synthase NadA.	0

>NZ_CP011456.1|WP_053538784.1|2069990_2070956_+|quinolinate-synthase-NadA
MFTTTLTQPKSGILPLDLFAAIADLKTELNAVILAHYYQDPDIQDIADFIGDSLQLAKAAANTKADVIVFAGVHFMAETAKILNPDKLVLLPDINAGCSLADSCPPQEFAAFKASHPDHLVISYINCSAEIKAMSDIICTSSNAVKIVQQIPQEQPIIFAPDRNLGRYVRSQTGREMLLWQGSCIVHETFSEKKLVQLKITHPHAEAIAHPECETSVLRHASYIGSTAALLNYCQTSPSQEFIVATEPGIIHQMQKLAPDKHFIPAPPQSDCNCNECPFMRLNTLEKLYLAMKNRTPEITLPEEIRIAALRPMQRMLEMSR
>NZ_CP011456.1|WP_053538783.1|2068910_2069840_-|TIGR04168-family-protein
MTSQKNQSKPIKIAVIGDVHDQWEVEDGIALQHLGVDLALFVGDFGNESVEVVKAIASLDLPKAAVMGNHDAWYSATEWGRKKCPYDRTKEDWVQEQLDLLGSAQVGYGKLDFPQWNLTVVGGRPFTWGGPEWRFAQMCQERYGVSSLEESADKIVKVVKSVTYDHIIFLGHNGPSGLGDRAEDPCGKDWHPIGGDFGDPDLAEAISQSLNLKKTVSLVAFGHMHRTLRHTKKLQRKAVFRSPEGTIYLNAATVPRIIQQDGMKLRNFSLVSLEDGLVTKASLVWVDQDYHIATEEVFYNSSVSVVPIL
>NZ_CP011456.1|WP_053538782.1|2067179_2068577_-|AAA-family-ATPase
MKIEIANLGFIQKAEIDLKPLTVFIGGNGTGKTWTAYTLASILGEYGRERYLQAYLDKKTQQRYPIIDNAIEEFLQEGNVRINLIDFAEEFLETYINDVSALAYTWINKFLATERVDFKKMKVNFDLLDAKQEIFNNIKNHISTLPFYFSSQNISKNTLYKLKELGEPSIYFYIVSISEGSILKKLPGKVFERILIQEIFTIINEAFYSFIYIFPTERTGVLPFFSSAIKIQDYEDDFDDENGINIPRILSSPVKHLQSKLQEIYRKPFSDREEEIQIHPQISEYIGLAEILENDILGGKVNIDNSDFDQEILYQPSENIKLEMTVSSSMVKELAPLVLYLRHLALPNELLIIDEPEMNLHPAAQVEITEFLAMLVQAGLKVLITTHSPYIVDHLSNLMKAAKYEDKESLKERFYLERTEAFIPQEEVSVYLFEDGTAKNILHEDGRIDWGTFGNVSDDISHIFP
>NZ_CP011456.1|WP_053538781.1|2066620_2067214_-|hypothetical-protein
MFQMTFPIFFHNHSYNLKFRSDFKMPFDHLLLSCCLLPGKTSHKEDGVEVSLQPASGETVLFFHIDEKSNPNCKFRKLLELDKEGMKICDLIVFYAKDNERIICFVELKGKDINTAKEQVINTYTYFNKFLKKTDSSLSFTAKTYILSKSSVPQELDKYKKELKDKFDEGNYDISKNSDLGDFLRGAKYQPKGKRKK
>NZ_CP011456.1|WP_053538780.1|2066234_2066483_-|plasmid-stability-protein
MTNITISNIDDDIKYQLQKRAEKHGRSLEEEVREILRLVLIENTKHPLNLATLIEQRFANLGDLELPEIAREPIRTVSIFEE
>NZ_CP011456.1|WP_053538779.1|2065809_2066238_-|type-II-toxin-antitoxin-system-VapC-family-toxin
MIILDTNVISELMKTQKSEIVREWVAEKPLMSMFTTTITQAEILYGIALLPEGKRRKELSQAAQLMFSEDFAGRVLAFDQNAAVAFAHIASQRRQNGTPISQADAQIAAICYTHKATIATRNVSDFEGCGISIINPWKYESV
>NZ_CP011456.1|WP_081424191.1|2062969_2065666_+|cyanophycin-synthetase
MRILKIQTLRGPNYWSIRRHKLIVMRLDLDKLAETPSNEIPGFYEGLVEALPSLEGHYCSPGCRGGFLMRVREGTMMGHIVEHVALELQELAGMHVGFGRTRETVTPGIYQVVIEYLNEEAGRYAARAAVRLCQSIIDRGRYPKAELEQDVQDLKDFWRDASLGPSTEAIIKEAEKKGIPWMPLPARFLIQLGYGIHQKRIQATMTNNTGILGVELAGDKEATKRILDANGVPVPRGTVINFFDDLEEAIEYVGGYPIVIKPLDGNHGRGITIDIRNWEDAEAAYEMARQVSRSVIVERYYVGRDHRVLVVNGKVVAVAERIPAHVVGNGKSTITELIEETNLDPKRGDGHDNVLTKIELDRTSYQLLDRQGYTINSVPPQGAICYLRATANLSTGGSAVDRTDEIHPENRWLAQRIVRIIGLDVAGIDIVTSDISRPLRELDGVIVEVNAAPGFRMHVAPSIGIPRNVAGAVMDMLFPNEQSSRIPILSVTGTNGKTTTTRLLAHIYKQTGKVVGYTTTDGTYIGDFLVESGDNTGPQSAHVILQDPTVEVAVLESARGGILRSGLGFENANVGVVLNVSADHLGIGDIDTIEQLAHLKSVVAEAVFPDGYAVLNADDYRVAAMAEKTKANIAYFTMNPDSDLVRKHIQQGGVAAVYEHGYLSIVKGDWTHRIERAENIPLTMGARAPFMIANALAASLAAFVQDVTIEQIRAGLRGFRASVSQTPGRMNLFNLGKYHALVDYAHNAASYEALGSFVRNWTTGQRIGVIGGPGDRRDEDFVTLGRLSADIFDYIIVKEDDDTRGRPRGSASDLIVEGITQVKPNYRFESILDETTAINKALDMAADGSLVVVLPESVNRAIKLIKMRGVQEEIQPQQSINNDSQNGIASSSVVNTLI
>NZ_CP011456.1|WP_027401350.1|2061927_2062791_+|cyanophycinase
MPQLEVKSLEMRTPQATKTAVLVIGGAEDKVHGREILRTFFVRAGGNKAYITIIPSASREPAIIAGRYVRIFEEMGAEKVEILDIREREQCENPEIKASLEACSGVFLTGGDQLRLCGVLSDTPAMEIIRQRVRAGQLTLAGTSAGAAVMGHHMIAGGGSGETPNRSLVDMATGLGFIPEVVVDQHFHNRNRMGRLVSAIAAHPDRLGIGIDEDTCAVFERDGWLQVMGKGSVTIVDPTELTHTNEPNVSANQPLTVHNLRLHILSYGDRFHLYQRTVLPAVHRISS
>NZ_CP011456.1|WP_053538777.1|2061235_2061499_-|hypothetical-protein
MTYKKGKREQGTGNREQGTGNREQGTGNREQGTGNREQGTGNREQGTGNREQGRNFMLYSSISSSKLRTPNSELRTPESMLGYQLWY
>NZ_CP011456.1|WP_053538776.1|2059764_2060247_-|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MNIRIGNGYDIHRLVSDRNLILGGIHIPHELGLLGHSDADVLTHAIMDAMLGALSLGDIGHYFPPTDPQWAGADSLVLLHQVHQLIREQGWKIGNIDSVVVAERPKLKPHISKMRDKLTAVLEVEPNQIGIKATTNEKLGPTGREEGICAYAVVLLVSGD
>NZ_CP011456.1|WP_053538785.1|2071201_2072092_-|hypothetical-protein
MVDRINDIAWQAHQGSVAAIIQVLNERLVVSGVRTRAVFATGILQLLCEAATVEQLEQSVLVPKIQEILDSLAPRHIRRVNINSRIVREEQLLWLEEINRDTDGQLLWSREITVYQPNLLKRLIPELTEVYTKSRKPILTKPQSLLKNRSQGKISVKTLFVWVAGLSSIILLAWLLDFRLSNPLKKLLPLVGSQSSQTVNQRPPESSNRPVRRSFSIPLDDPFAASVRLANQATVTGKTAITSTQWLELAATWQRASDLMGQVAPSHSRYQEAQIRTKLYKKFSEAAQKEAQKSRY
>NZ_CP011456.1|WP_053538786.1|2072424_2073558_-|hypothetical-protein
MSEPYLLAASLLTGLVIPISTPPQITNLPKDSLSLLDLAEGFQVYEGKRNSPRQIAVPEFSNQIEKSSPANKSLVKTDKSLPEFSRQTPTTVEQSSVIRKNLPTLEILLSEFRQHGLSIPVKSSFNLNSPTTPTKSPISGSQLYQQRLASLISGQIYTRTDNDENLALSGESNKADKLTYQDWKSLLALEAKAMAKGQGANRLSILVGDSLSLWFPKDKLPTGKLWLNQGISGDTSEGVSKRLSAFSGTRPDVIYVMTGINDLRKGATDKSILVNSSRIIHSLRQSHSSSQIIVQSILPVRSQKIPNSRIRHINAQLAIIAQKQGANYLNIHNWFTDIDGNLRPELTTDGLHLSLAGYQVWQFALEQIEYRVAQIYN
>NZ_CP011456.1|WP_015083627.1|2074488_2074683_+|hypothetical-protein
MARASTAIGVSPIIKEIVQKQAHSTRLTLKEVILMGMLAIDKLDDQNCQELADQVHQMQVNGEI
>NZ_CP011456.1|WP_053541234.1|2075415_2076138_-|cyclase-family-protein
MSKNPQPLSNISYSRVIHLSHLIDQDIPKWTGDPPVEFTSVAEIPDDGYYLRGFSLGEHSGTHINAPNSFYANGASIDQYPASCLILPAIVINICEQAAVNPDYALTVSDIQTWETEFGEIPTGSLVILYTGWQEKWLNHQAFFNQDKDGKMHFPGFSYDATEFLITHRQITGVGIDTHGVDSGQNTNFTINRLLLERSLIVLENLTNLDQLPPHSITLIIGILRLRGGSGSPAAIMALF
>NZ_CP011456.1|WP_081424192.1|2076476_2077784_-|HlyC/CorC-family-transporter
MSSFTFEILTILVLIFANGVFSMSEMAVVSARKVRLQQLANQGDINAKAALKLAESPNHFLSIVQVGITLINILNGVFGGATIAKRLEDYIKLIPILANYSNAIAFGIVVLLITYFSLIVGELVPKRLALNNPEKIAASVAIPMRALAKIASPIVYLLSASTDLVLRILGITPSAEPQVTEEEIKILIEQGTEAGTFEEAEQDMVERVFRLGDRPVTSFMTPRPDIVWLDLEDPPEENRQKMAESGYSRYPICQEGLDNVLGIIPVTDLLARSLRNEPLDLTLGLRQPVFVPESTRGLKVLELFKQTVTHMALVVDEYGVIQGLVTLNDIMSEIVGDVPTEPGQEEPEAVQREDGSWLVDGMLGIEEFLELFDLEELEHEERGNYQTLGGFVITHLGRIPAAADHFEWDGMRFEVMDMDGNRVDKVLVVPKVMAN
>NZ_CP011456.1|WP_053538788.1|2078063_2081537_+|transcription-repair-coupling-factor
MSFSSIVRALARSPLTAELITKLNKQQELRLNGISRLPKGLVASALANYEDQDLCVVCATLEEAGRVFAQMEAMGWKTVHFYPTSEASPYEPFDPENELSWGQMQVLADLVNGRSSVVSGQLPKQRTAIIATVGALQPHLPPPDAFKSFCVTLEKGMEFDLDGFGEKITILGYERVPLVETEGQWSRRGDIVDVFPVSSELPVRLEWFGDEIEQIREFDPATQRSALDKVEKVTLTPTSFAPIINTALTENVETFHEPSLQELGTLEGSRRFLGLAFAKPASLLDYLAENTLVAIDEPEQCYAHSDRWVENANSQWSVVSGQLSVGLPKIHRNFDECIGEISNFRKLYLSELSEENNGLNLASRPLPVTPHQFAKLGETIRNERERNFAVWIISAQPSRSVSLLQEHDCPAQFIPNPRDYQAIDKLQINHIPIALKYSGLAELEGFILPSFRLVIVTDREFYGQHSLANFGYVRKRRQATSKQVDPNKLRQGDYVVHRSHGIGKFVKLESLTINDETRDYLVVQYADGLLRVAADQVSSLSRFRTSGDKAPELHKMTGKAWENTKNKVRKAIKKLAVDLLKLYAARSQQQGFSYPADMPWQEEMEDSFPYQPTTDQLKAVQDVKRDMESERPMDRLVCGDVGFGKTEVAIRAIFKAVTAGKQVALLAPTTILTQQHYHTIKERFAPYPVNVGLLNRFRSAEEKRNIQKRLATGELDIVVGTHQLLGKGVQFKDLGLLVIDEEQRFGVNQKEKIKSLKTQVDVLTLSATPIPRTLYMSLSGIREMSLITTPPPTRRPIQTHLAPLNSDIVRSAIRQELDRGGQVFYVVPRVEGIEETTTKLREMVPGGRFAIAHGQMDESELESTMLTFGNNDADILVCTTIIESGLDIPRVNTILIEDAHRFGLSQLYQLRGRVGRAGIQAHAWLFYPKQRELSDAARQRLRAIQEFTQLGSGYQLAMRDMEIRGVGNLLGAEQSGQMDVIGFDLYMEMLEEAIREIRGQEIPKVEDTQIDLNLTAFIPATYIPDLDQKMSAYRAVATVKSKYELKQIAAEWTDRYGTIPVPASQLLRVMELKQLAKNLGFSRIKPENKQHIVLETPMEEPAWNLLAENLTPTMKARFVYSPGKVTARGLGVFKADQQLQTLIDTFVKMQGAISETA
>NZ_CP011456.1|WP_053538789.1|2081644_2082922_+|AAA-family-ATPase
MFKQVTLENFRTHKLTTIELYPVTLLIGNNNSGKTNFLAGIQHFCNLVRRGNFNNEIDQTINANKDLYPHKHRLAKDEEPMSFSILWNNIIGGINYKIETYEIDPFSDAFGCKETIIITLANNETPKEVNSVYDQSGFILELRKKIQLDQDLNRIEKRLCELFFLDFDNIFSYHFQPTFLKQKDNQDIDQKHDFEISAIPVYLRDRLIPIYLKETGSNFQSLLRYVKEKEERIFSSFIAKMRTVDTSFIGVRYDPNRSSLIWEFDLGRKGIIEEFMPDLVSDGFMKIAVISLLTSLKKPPALIMLEEIENGINPGNIQQLMNWIWQATSPSQDGFAKTQFILTSHSPSVLREFNQHPDHVYTVRLDKRSRQSDVRNLNTALDTLVGIGAIKDDEVEYETEENTGKQLIKIPKYQLAELWYTGTIG
>NZ_CP011456.1|WP_053538790.1|2082928_2083678_+|hypothetical-protein
MNTINVGIVGDGLTDYKVFGKIVECILLEEISENVKFDIIPLIRKNIFDHVQKYKNACRKNPEGYYLPNKIAVELRDSICGTIIQAFEEFKDNVDISYSDILLITTDTEHILKDKNQYFDTWAISLSHILREAIEKFYAFQARNEYPRKYLPIIMPLTTFPSIEVLVAAARGELNKNYGKNPREWKVLLYKTEYPQDEEIEKQALDYITPESIDYIFNDLPEARFFIQTLSLGLKRCFLNSKSNCEKYI
>NZ_CP011456.1|WP_053538791.1|2083958_2084516_+|Uma2-family-endonuclease
MVLQLLRHQFTVKQFHQMAESGILSENERLELIRGEMIDMSPIGTRHSGCVLFLSNLLALLLGGLALINVQNPVELDETSEPQPDIALLKPRADFYRTAHPQPEDIFLLIEVADTTIKYDREVKIPLYAEANIPEVWLIDVNQEVIEVYRNPLQGVYQDIQKLVKNQTLSILAFPDVSINVTEIF
>NZ_CP011456.1|WP_053538792.1|2084573_2088407_+|hypothetical-protein
MTSPFEPSQKIPIKLPSNHPDLLLGLDDLLELGLISDDQVKQIARQYLTCTVVFTPQTASEPEEIFTPSTPPRKPLIATLPPITKPPTKPSFVNSMLQSFGEELSVRWLLFLGIFLVVLSSGVLAASQWERFPAVGQYGVLFAYTLSFCGFTFWAGKQSNLRLTAQTLLIVTLLLVPINFWAMDSFSLWQNPLNLVVMGIASLTLTFITNQLCQNRNIINNFPSGKLPLINIIGLSYLHWGWKLSNFPLIAVYLAMIGTTTITVYNQLTQPQENTNIETPQWGISLYFTFLIYALLTLLTRAIFIAGVNITQLGLAIGICGGLVIWLSEKNSSTNPSILWEELGRSLLLLGWLVSVITEPAQAIIVSILSLWVFSRRLQKYNLQKDFLAIFLIGLQTIWLGWRLIPNELKTLLISTATHLTNSQNHPWVLLSIALFPYVILMLWLTDKLHNQENQDLADFGEQLTLGLGICLTIISLVNPILRTINFLLSTITLATFIQRRAAFSPPLIYLTHGMGVLTLISSINWFLPSLNQEIWAGILLAIMIAEWGFSLGEGITRRSAWYIGLVLAAISFSLLWVNAESYWHGNWQNQNSLGVIWLITPLALTGLAIRNTEPNRTTNRFLSVFAVGISQLLTLPLPGIRLIGLGVGIAVMLVHTRYSRNQIYAGIIIGFGLSFLTALLGEGVFGLIQLKISGWFVVTALTILSLWLWRGVLLRKGTELAIIYAAASDKWAIALCTIELSALTLHSSLIYQSIIKTEYIYVITTAIILASIIYRSWGQSKESAFYGIGWCLELLTAEILGFGEHSIIRIAIANIILGLTTQLFGEWWRRKHQLQTLPNSFHILPLIYGAFSVILRLNTFANFTGFCSLGVALILIGVGRRREAFKPLLYFGIIGLSISAYELLFYQMSLSKGEALGDGLIAMSALGTSIMYAYRILTPWLISYLGFNSQELKNIAHLHWVWSSILFLFAMTLPIQINSSIVLGTGLFLVRYAIWQGKENSQETNQEIWVYLGLIEVGIIGIYLQNLPIGRLIFEQLLPWNGAISCLFAYFLYILPWQRLGWSKTPWQRTAYILPLIIVGTTGLTTYPITLIIVAAYYIFLANAATQIRFTYISLILIDWALFTWFNDLNFRDSLWYVIPIGLSLLYIAQIDEQLKLSTTKPLRHSLRMLGSGLICGWTILFYQNLPFIPGVFSLITIFAGLGLKVRAFLYVGTGTFLITSIYQLVIFSLSYSFLKWIVGLLVGILLIYIAANFETRRTQITALLRNISDEFANWD

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Crispr_ID: NZ_CP011456_14

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011456_14

2347015-2347100

Orphan

Consensus_repeat	Method
TAATACGAGTCCTAGTGTGGGGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP011456_14

>merge|NZ_CP011456|14|2347015-2347100|CRISPRCasFinder
TAATACGAGTCCTAGTGTGGGGACTGGTGGGAGCATGAGTGGTGGTGGCACTACTGGCTCTGGTAATACAAGTCCTAGTGTGGGGA

>NZ_CP011456|14|14|2347015-2347100|CRISPRCasFinder
TAATACGAGTCCTAGTGTGGGGA	CTGGTGGGAGCATGAGTGGTGGTGGCACTACTGGCTCTGG
TAATACAAGTCCTAGTGTGGGGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011456.1\|WP_053538931.1\|2344330_2345212_+\|tRNA-pseudouridine(55)-synthase-TruB	unknown	unknown	gnl\|CDD\|179469
NZ_CP011456.1\|WP_053538935.1\|2351555_2352707_+\|alanine--glyoxylate-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|223153
NZ_CP011456.1\|WP_053541244.1\|2354994_2355708_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP011456.1\|WP_027400959.1\|2336023_2336251_+\|ferredoxin-family-protein	unknown	unknown	gnl\|CDD\|224069
NZ_CP011456.1\|WP_053538929.1\|2341234_2342152_+\|DMT-family-transporter	unknown	unknown	gnl\|CDD\|225510
NZ_CP011456.1\|WP_053538930.1\|2342402_2344160_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|226651
NZ_CP011456.1\|WP_053538934.1\|2348271_2349702_+\|dihydrolipoyl-dehydrogenase	unknown	unknown	gnl\|CDD\|235798
NZ_CP011456.1\|WP_053538926.1\|2337174_2337843_+\|DUF2301-domain-containing-membrane-protein	unknown	unknown	gnl\|CDD\|370802
NZ_CP011456.1\|WP_053538937.1\|2353686_2354214_-\|DUF192-domain-containing-protein	unknown	unknown	gnl\|CDD\|376876
NZ_CP011456.1\|WP_053538924.1\|2334700_2335912_+\|ATP-phosphoribosyltransferase-regulatory-subunit	unknown	unknown	gnl\|CDD\|237043
NZ_CP011456.1\|WP_053538940.1\|2358207_2361252_+\|N-6-DNA-methylase	unknown	unknown	gnl\|CDD\|369456
NZ_CP011456.1\|WP_053538928.1\|2339339_2340914_-\|class-A-beta-lactamase	unknown	unknown	gnl\|CDD\|379138
NZ_CP011456.1\|WP_053538927.1\|2338076_2339195_+\|DNA-protecting-protein-DprA	unknown	unknown	gnl\|CDD\|223829
NZ_CP011456.1\|WP_053538932.1\|2345535_2346597_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053538941.1\|2361254_2361632_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053538936.1\|2352799_2353027_-\|DUF2949-domain-containing-protein	unknown	unknown	gnl\|CDD\|371402
NZ_CP011456.1\|WP_039202207.1\|2349871_2350753_+\|indole-3-glycerol-phosphate-synthase-TrpC	unknown	unknown	gnl\|CDD\|234710
NZ_CP011456.1\|WP_039202208.1\|2351142_2351388_+\|DUF5340-domain-containing-protein	unknown	unknown	gnl\|CDD\|375096
NZ_CP011456.1\|WP_053538939.1\|2356825_2358082_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223834
NZ_CP011456.1\|WP_053538925.1\|2336371_2337100_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|223487

Protein	Function_ID	Function_description	E-value
NZ_CP011456.1\|WP_039202207.1\|2349871_2350753_+\|indole-3-glycerol-phosphate-synthase-TrpC	gnl\|CDD\|234710	PRK00278, trpC, indole-3-glycerol phosphate synthase TrpC.	2.98328e-143
NZ_CP011456.1\|WP_053538939.1\|2356825_2358082_+\|hypothetical-protein	gnl\|CDD\|223834	COG0763, LpxB, Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane].	3.08569e-12
NZ_CP011456.1\|WP_053541244.1\|2354994_2355708_-\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	3.13493e-73
NZ_CP011456.1\|WP_053538931.1\|2344330_2345212_+\|tRNA-pseudouridine(55)-synthase-TruB	gnl\|CDD\|179469	PRK02755, truB, tRNA pseudouridine synthase B; Provisional.	5.25037e-174
NZ_CP011456.1\|WP_053538929.1\|2341234_2342152_+\|DMT-family-transporter	gnl\|CDD\|225510	COG2962, RarD, Predicted permeases [General function prediction only].	7.33326e-06
NZ_CP011456.1\|WP_027400959.1\|2336023_2336251_+\|ferredoxin-family-protein	gnl\|CDD\|224069	COG1146, COG1146, Ferredoxin [Energy production and conversion].	2.15784e-09
NZ_CP011456.1\|WP_053538934.1\|2348271_2349702_+\|dihydrolipoyl-dehydrogenase	gnl\|CDD\|235798	PRK06416, PRK06416, dihydrolipoamide dehydrogenase; Reviewed.	0
NZ_CP011456.1\|WP_053538926.1\|2337174_2337843_+\|DUF2301-domain-containing-membrane-protein	gnl\|CDD\|370802	pfam10063, DUF2301, Uncharacterized integral membrane protein (DUF2301). This domain, found in various hypothetical bacterial proteins, has no known function.	3.65283e-75
NZ_CP011456.1\|WP_053538930.1\|2342402_2344160_+\|alpha/beta-hydrolase	gnl\|CDD\|226651	COG4188, COG4188, Predicted dienelactone hydrolase [General function prediction only].	9.24626e-75
NZ_CP011456.1\|WP_053538924.1\|2334700_2335912_+\|ATP-phosphoribosyltransferase-regulatory-subunit	gnl\|CDD\|237043	PRK12292, hisZ, ATP phosphoribosyltransferase regulatory subunit; Provisional.	3.48984e-143
NZ_CP011456.1\|WP_053538940.1\|2358207_2361252_+\|N-6-DNA-methylase	gnl\|CDD\|369456	pfam07669, Eco57I, Eco57I restriction-modification methylase. homologs of the Escherichia coli Eco57I restriction-modification methylase are found in several phylogenetically diverse bacteria. The structure of TaqI has been solved.	4.14499e-21
NZ_CP011456.1\|WP_053538928.1\|2339339_2340914_-\|class-A-beta-lactamase	gnl\|CDD\|379138	pfam13354, Beta-lactamase2, Beta-lactamase enzyme family. This family is closely related to Beta-lactamase, pfam00144, the serine beta-lactamase-like superfamily, which contains the distantly related pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	2.27312e-72
NZ_CP011456.1\|WP_053538927.1\|2338076_2339195_+\|DNA-protecting-protein-DprA	gnl\|CDD\|223829	COG0758, Smf, Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake [DNA replication, recombination, and repair / Intracellular trafficking and secretion].	2.16396e-133
NZ_CP011456.1\|WP_053538937.1\|2353686_2354214_-\|DUF192-domain-containing-protein	gnl\|CDD\|376876	pfam02643, DUF192, Uncharacterized ACR, COG1430. Two structures have been solved for members of this large (>500 members) family of bacterial proteins present mostly in environmental bacteria and metagenomes (distant homologs are also present in several Plasmodium species). TOPSAN analysis for Structure 3pjy shows that there is much similarity with the other solved structure, Structure 3m7a, solved for UniProt:Q2GA55 (Saro_0823), a homolog of Thermotoga maritima TM1668, UniProt:Q9X1Z6., The homolog in Caulobacter crescentus (CC1388), UniProt:Q9A8G6, is associated with CspD, a cold shock protein (CC1387), UniProt:Q9A8G7. However, the genomic context of UniProt:Q2GA55 is most conserved with a putative xylose isomerase, suggesting a possible role in extracellular sugar processing. Saro_0821, UniProt:Q2GA57, is annotated as an AMP-dependent synthetase and ligase. Structure 3m7a structure corresponds to the C-terminal (27-165) fragment of the YP_496102 (Saro_0823) protein and it is structurally unique, as the best hits from Dali have a Z-score of 3.8 (1nt0, 2j1t, 3kq4) and it is thus a likely candidate for a new fold. Interestingly, many of the top Dali hits are involved in sugar metabolism. There are no obvious active site-like cavities on the protein surface of 3m7a (http://www.topsan.org/Proteins/JCSG/).	1.32465e-46
NZ_CP011456.1\|WP_053538936.1\|2352799_2353027_-\|DUF2949-domain-containing-protein	gnl\|CDD\|371402	pfam11165, DUF2949, Protein of unknown function (DUF2949). This family of proteins with unknown function appear to be restricted to Cyanobacteria.	1.67962e-27
NZ_CP011456.1\|WP_053538935.1\|2351555_2352707_+\|alanine--glyoxylate-aminotransferase-family-protein	gnl\|CDD\|223153	COG0075, COG0075, Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism].	1.71407e-160
NZ_CP011456.1\|WP_039202208.1\|2351142_2351388_+\|DUF5340-domain-containing-protein	gnl\|CDD\|375096	pfam17275, DUF5340, Family of unknown function (DUF5340). This family of unknown function can be found in Cyanobacteria.	3.44912e-38
NZ_CP011456.1\|WP_053538925.1\|2336371_2337100_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|223487	COG0410, LivF, ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism].	3.43711e-119

>NZ_CP011456.1|WP_053538932.1|2345535_2346597_+|hypothetical-protein
MRKTKFLCMLLRPNWLKFIGTTLLSYIWAITALSVTPASATNEITPKTHSSKELITDQAQLKTNLPDLQDVLAKNVESGRKIEPLLYQKQSWITAQTDTSAPNDKRQLNTDKLRQYLLVDPLVKVIPLKRTYSPSLTFATPSAFGATWGDVFLGASAATTGKARTQPDGSISMGFGLGDARKLVGLELGYNIGSIKNFGYNGTFDLKANRIVYAKGNTQIAAAAGWKSFAQHVKGESVRPSSAYGVVTSYSLLKPNDTVNKMPISFSIGAGGGDFRTGDANTGVFAGVGVQVHPQIGVGMGWSGVGFNVGASFVPISTIPLTINAVGADLTDTSLGGTVFVLSIGYGFNFLPK
>NZ_CP011456.1|WP_053538931.1|2344330_2345212_+|tRNA-pseudouridine(55)-synthase-TruB
MQGFLNLNKPLDWTSHDCVAKVRKLLKMKRVGHAGTLDPKATGVLPIALGKATRLLQYLPGEKAYQATVRLGIQTTTDDLEGEIITSAPCPGLDLENIKTSLSQFIGKIEQIPPSYSAIQVDGKRLYDLARKGEIVEVPVRTVEIAQIQVLDWRDGDFPELDIAISCGAGTYIRAIARDLGTILNTGGTLSALIRTQSSSFQLPTSLSFTDLATEIENSTFQPISADTPLQHLKAVNLAPESAKKWCQGQKIPLNLVIDDFVRVYETETNFLGIGKLAHDLLVPQMVFFEYPN
>NZ_CP011456.1|WP_053538930.1|2342402_2344160_+|alpha/beta-hydrolase
MNMFGNWGSTLIKNSLILILSILLPTFGISNPVMAAEQIHASYSALEISIPISALESYAKYGIINADLAGYYQYIPTNKLQELRKILVQPLKISPAVTSQFLDTQQGKFILQRLAGLIKPKSDYSKFTSWSLRTALIAAAAEPEGLNLLNLLRKYPQNNIKIDVASSLKVAGELEKMINDTETTISALIQASKLEADQISYPNFSQLPRFSNPVILSTKKQIIKFFDVVRNRHLTTEIYIPNSQNPVPVIVISHGLGLDSSNFRYLADHLVKHGFAVVIPNHPSSDAKQLKSLINGNSNQVTHPNEFKDRPLDIKYILDQLESDSQFQQRLNLQQVGVFGQSLGGYTALALAGAKINFSQLQADCHPDKLRNTWNMSLLLQCRALELPNQSGQDYNLQDTRIKAAIAVNPITSSIFGQAGLSQIHTPVMIVGSSEDTVAPTLYEQIVPFSWIIHPEKYLVMLLGGTHFSTIGNSNPDSTQMALPTDMVGDASQAHDYMNALSLPFFQTYIAGKPEYLPYLNAAYAQSISSQSLGLNLVQSLDHLKLAPILGNLQDSKPVKKKLAHTIVHFGFWLLGIGVSLLHLI
>NZ_CP011456.1|WP_053538929.1|2341234_2342152_+|DMT-family-transporter
MHQSSGRWRLGLSLSLVTVFLWGVLPLALTVTLQELDVYTVIWFRFLTSFLLLAIYLLFQQQLPTLEQLRATSWQLLVVATIFLAANYFLFMQGLALTAPANAEVIIQLSSVLLSFGGLVIFNERYTLYQWLGVAVLTLGFALFFHAQLVNLITAKGEYLLGSGLIVFGAIAWAIYALSQKQLLQSLSSAKIMLIIYGGCALLFTPLAKTHTIFTLDTFYFSTLIFCALNTLVAYGAFAESLVHWQASRVGAVLALAPIITLISGWLMSVITPNIISPENISLVGVIGAFFVVIGSISIALCEPN
>NZ_CP011456.1|WP_053538928.1|2339339_2340914_-|class-A-beta-lactamase
MSETSDKLIPISQRQPVQRRRRKRPVPKTGQKKVINQQPVSSPRETATLARPNNHSSPVPISSGGRKPASRKMMPPGVKPVPTVKKNTQISPSANVRLKTVRMEKPRIESRGSRKTRLKPMARTVLYALRLLIVGVGIGAIVGTLLSILDPANRLGSVALVSQTTTSQKTSQTPNTSLYLSQEITSLKNSLQTLTTANADLMPGVFLLDLDNGGYVDINSNASFAAASTIKIPILIAFFQDVDAGKIRLDEILTLQKEMIVGGSGNMQYQTPDSKYTALDVATKMITISDNTATNMLVAKLGGQEALNGRFRSWGLTTTMIRNPLPDLEGTNTTSPRELGNLISMVNQGNVVGMRSRDLMLNIMSRTERDNLLPAGLGKGANAYHKTGDIGTMLADAGLIDVPTGKRYIAAIMVKRPNNDPRAAKLISSISSAAYEHFSQTTVTPSNPINNQPVTQPITQPATQPATQPITSPISNYQPPVQPFVQQPVQQPIMNPAMPNGMVNNMPMGSYPPPVMTPQYYPPQ
>NZ_CP011456.1|WP_053538927.1|2338076_2339195_+|DNA-protecting-protein-DprA
MSNTEERKYWLAWSQISGIGPILLQRLQQHFGNLENAWKATPSELRKVEGLGFQTLEKVVQQKSRLNPEQLLTQHQQANPLFWTPADPEYPQLLREIPSPPPLLYYRGEVDLQENSGQKPLVGIVGTRQPTEYGIKWTRQISTALAKNGFTIVSGMAEGIDTESHAAAMKAGGRTIAVVGTGVDVIYPHKNQGLYKQILTSGIVISEYPAKTTPNRTHFPRRNRIIAGLSRAVLVIEAPIKSGALITATYANEFCRDVYALPGRIDDQPSQGCLKLISQGAGLINQELSQLLTMLGAIPQIDIEIPIVKSPPLPDLAPELQQVIDTLTIDTLSFDFIIQKTGMNAALVSSSLLQLELMGLVTQLPGMRYQKC
>NZ_CP011456.1|WP_053538926.1|2337174_2337843_+|DUF2301-domain-containing-membrane-protein
MTTQTISSPAVYQGQFGEFTITQSDRQSVIIYRTGLMIAALCFAIGSGLVLFYPQPAAMPAASFAIASLTPLYTCFSIALGVSLLTIHIYMAFLHRILQLFWIIGSICAFIFGHGDSQAFAITIYNQPLTILGIGFTFAALTGIFFKEGFCFHRLETKILTPLVPLLLLGHLTGILSTPAEQVLLATWAILFLIFAIRKVIQAIPPDIGDKSVFDYLKNRRC
>NZ_CP011456.1|WP_053538925.1|2336371_2337100_+|ABC-transporter-ATP-binding-protein
MTNNYLLNVENVHAGYIKDVDILQGVNFHIAPGELVTVIGPNGAGKSTLVKTIFGLLTPHTGTITFKDQNLIGLKSNQIVAKGMSYVPQIANVFPSLTIDENLEMGAFVRDVPLKPLKDKIYTMFPRLSDRRRQRAGTLSGGERQMLAMGKALMLEPSLLLLDEPSAALSPILVTQVFEQIKQIKKSGTAIVLVEQNARKALEMADRGYVLESGRDAISGPGRELLNNPKVGELYLGAGKGH
>NZ_CP011456.1|WP_027400959.1|2336023_2336251_+|ferredoxin-family-protein
MPHTIVTDVCEGVADCVSACPVACIHPGPGKNVKGTDWYWIDFATCIDCGICLQVCPVENAILAEERPELQKIVN
>NZ_CP011456.1|WP_053538924.1|2334700_2335912_+|ATP-phosphoribosyltransferase-regulatory-subunit
MVYQPAAGARDLLPLDVAQKRWIEDRLEQVFQRWGYHRIITSTLERMDTLMAGEAIQRQMVIQLQNSQNEELGLRPELTASIARTVVTRMADATYPQRLYYNANVFRRNWEGRHNRQQEYYQAGVELLGAEGLLANGEVLLLVADCLTALDLKDWRLILGEAGITRSLLNAFPPEIRNQVRRAIANLDRVTIDTLPLEEELRQRAKIMLDLRGDSKDVLQKVSSLHLEPDQHEAINNLRSLVELLDGKFPLILDLSLIQTIDYYTGLVFEVVSETNSQAQILGSGGRYDQLLGLYHPQKENIPGIGFELNIDDLYQILLSNQQLPQDIPASNWLVVPETPGAEAAAFAYADKLRNSTNLVRVEIDLGGRDTAGIRQYASDRSITQIAWIKADGSHTIEPGIIP
>NZ_CP011456.1|WP_053538934.1|2348271_2349702_+|dihydrolipoyl-dehydrogenase
MSPGFDYDLVIIGAGVGGHGAALHAISCGLKTAIIEAGDMGGTCVNRGCIPSKALLAASGKVRELRNAHHLKSLGIQIGNVEFERQAIADHANNLVAKIQGDLTNSLKRLGVEIIRGWGKVSGTQKVTITTDKGEKTITAQDIILSPGSVPFVPPGIEVDGKTVFTSDQGVKLETLPKWVAIIGSGYIGLEFSDVYSALGCEITLIEALSELMPGFDRDIAKLAERVLINPRDIETKVGIYAKKIIPGSPVIIELADFETKEDLEVLEVDACLVATGRVPATQNLGLDSVGVALDRRNFIPVNDNMAVLSDGEVIPHLWAIGDATGKMMLAHAASAQGVIAVENMMGRHKTVDYRSIPAAAFTHPEVSYVGLTETAAHALGLTEGFEVATSKSYFKGNSKALAENDTDGMTKVIYRKDTGEVLGVHIFGPHASDLIHEAAAAIASRQSIQTLAYLVHAHPTLSEVLDEAYKRALVS
>NZ_CP011456.1|WP_039202207.1|2349871_2350753_+|indole-3-glycerol-phosphate-synthase-TrpC
MQIRRRSPSTVINISILQYRSAIEGAAPNNILEEIVWQKETEVEQMRERLPLRELQTQALSAPPTRDFVAALRQGKTHPALIAEVKKASPSKGVFREDFNPVAIAQSYQKGGASCLSVLTDVKFFQGSFENLSLVRSAVDLPLLCKDFIIYPYQMYWARIHGADAVLLIAAILNDQDLQYFIKIAHNLKMATLIEVHNLEELDRVLALDGVSLIGINNRNLEDFSVDLQTTCQLLTARGEQLQAKNILVVSESGLHHPEDLSIVKKAGASAVLIGESLVKQPDPQLAIANLFA
>NZ_CP011456.1|WP_039202208.1|2351142_2351388_+|DUF5340-domain-containing-protein
MEPIPLPSPIHYELILQLLERQTMTSLGQNEDLRNQVNQLIVTLRKAASQQKRLEESFQSSSLIIDHRWSINHFGDKVDCS
>NZ_CP011456.1|WP_053538935.1|2351555_2352707_+|alanine--glyoxylate-aminotransferase-family-protein
MDDKLMLMIPGPTPVPEAALLALAKHPIGHRSGEFSSMMAEVTENLKWLHQTSSDVLMLNVSGTGAVEAGMINFLSPGDRILVGSNGKFGERWVEVGQAFGLNVEAITAEWGQPLDPAQFAAKLQADTNKEIKAVIITHSETSTGVINDLEAINRHVKEHGEALIIVDAVTSLGAYNVPVDAWGLDVVASGSQKGYMIPPGLGFVSVSPKAWEAYKTAKLPKYYLDLGKYRKATAKNTTPFTPPVNLMVALHTTLGMMKKEGLESIFTRHERQKNATRAAMKALNLSLFAADECASPAITAVATPGIETDKIRSLMKKRFDIALAGGQDHLSNKIFRIGHLGFVCDRDILSCIASLEVVLPQVGHENFTPGAGIAAAAKVFAQ
>NZ_CP011456.1|WP_053538936.1|2352799_2353027_-|DUF2949-domain-containing-protein
MIINSTQVGEIQMTPSRYSRLINFLQEDLAISAASLAVALRSRDQDPGSLTMTLWQYGLITLEQLEQIYDWLETA
>NZ_CP011456.1|WP_053538937.1|2353686_2354214_-|DUF192-domain-containing-protein
MISWLSLCSILLSILLMGCSLPTTAKSPAVTPESSTQTSVNAGQNLPISAEATLPRNIKIQLEVARTQEQQQMGLMYRKDLPDNRGMLFLFPNAQPVQFWMKNVPVALDMVFLRQGVVQYIQTSAPPCDIEPCPTYGPNVLIDQVIELRSERAKELGLKKGDQIKIDFLVPGAIP
>NZ_CP011456.1|WP_053541244.1|2354994_2355708_-|response-regulator-transcription-factor
MIATHNPAVFVLVVEPDETLANQLAGDLQEAGYDAIVTHDAANGLKYCSGASSNQTHRQPALIVVDRMLVGESGLSLCKNLRNIGNRSPILVLMARDTVDDRIACLDAGADDYILKPYRSEDFLKLIRLYLKPDVDTTEQLRFGDLILDIGTRRAIYNSKVIDLTMKEFELLKFLMEHPREVLTREQILENVWGYDFMGESNVIEVYIRYLRLKIEEEGQKRLIQTIRGVGYVLRDS
>NZ_CP011456.1|WP_053538939.1|2356825_2358082_+|hypothetical-protein
MTTPVDILILSNGPGEVTTWVRPVVKALREELGHDVSQLRISVILSPCPHASGKETDIALGYPEVDRVQAPEYFWQFLLWGKTAQNWEWRNQGVVIFLGGDQIFPVIIGKKLGYKTVVYAEWEARWHNFIDKFAIMKAQVAKNVSAKYADKFTVVGDLMLEAAKNEITPKIANLQSKVELIGILPGSKSAKLTQGVPLMLAIAEYIYRQNPKTKFFIPVAPTLDLPTLANFANPETNSFTKAFGFQGASLSGNFLVTPTGLIVELKQENPVYDLLSQCSICLTTVGANTAELGALAVPMIVLLPTQQLDAMRSWDGLPGVLANLPGVGSGFAKLINWWVLRRKGLFAWPNIWAQAEIVPELVGKLQPEEVGEMILDLLANPEKLEAIRDKLRSVRGEGGAAQKLAILVKEELLETSKK
>NZ_CP011456.1|WP_053538940.1|2358207_2361252_+|N-6-DNA-methylase
MKAPDSIVQLVEHFHSSIELYRAGGINETQTRIEFINPLFAALGWDIGNERQISDIYKDVVHEDSLKISDANKAKAPDYSFRVGGVRKFFVEAKKPAVNVGQNMSAAFQVRRYGWSAKLALSILTDFEEFAVYDCRIMPNKNDSASVARIKHFNYTEYIDKWAEIYNLFSKEAVLNGSLERFAETKVKSGITVDQKFLQEIEVWRENLAANIVWRNPQIQQRELNFAVQMTINRIVFLRICEDRGIEPYQQLYNLLKFENFYQELGRLFINADYRYNSGLFHFQDEKGRENPDDFTLNLTIDDSILTLIIRKLYPPESPYEFSVIPVEILGQVYEQFLGKVIQISASRQAVIEDKPEVRKAGGVYYTPSYIVDYIIKQTIGKVLENKKPEKIQDMTILDPACGSGSFLIVAYQFILDWYLEQYLQNPKKYKNKFYQISDHQWRLSASERKQILLTHIYGVDIDQQAVETTKLSLLLKVLEGESGETITRQLQLFKERALPDLDHNIQCGNSLIDGEFYQHTQLNCLDEDTAYRVNIFDWELAFSAIMKRGGFDVVIGNPPYIRIQALKEWAALEVEFYKKQYVSASKGNYDIYVIFVEKGLELLRKDGYLGFILPHKFFNAQYGESIRKLISEGKYLNKIVHFGDQQVFPKVSTYTCLLFLKKSQQSDLEMEKVIDLMDWKIHNNGQTGIINHLLVSSSEWNFTLGEDAKIFTKLQQIKSTLEDVTERIFQGIKTSADKIYIVEELSREDNLIQVFSKQKQTAYWLESKLLHPLIKGGDSKRYYLSKTNKLIIFPYMLKNNGSMELISMNIFEKEYPSTWNYLLDNRNYLESRENSKMLGENWYGYSRFQALNVMALPKIFTPDIATGSSFTWDKTGEIFFTGGVAGGYGILVKSNYSWEYILGLLNSKVLEFYLKKSSTSMRGGYYSFESRFIRNLPIKVIDNSQIPEKKKHDLIVNLVQQMLSLHEKINEVNTPPAKKMIQQQIQATDRHINQLVYELYELTDAEITMIEGT
>NZ_CP011456.1|WP_053538941.1|2361254_2361632_-|hypothetical-protein
MFDILPFRFELDTVAIAGACLWALALYVSFSQTRQWVTTQLNRWFNFAERFLYTSQSEFEKTRKARESQNSFYASLFSIFPFLIFGSLSNWVLDISLGNSWGISMGILTCIGAGVYELGRGQGEE

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Crispr_ID: NZ_CP011456_15

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011456_15

2575815-2575899

Orphan

Consensus_repeat	Method
TAAAGTATCAATAAATAATCCTGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP011456_15

>merge|NZ_CP011456|15|2575815-2575899|CRISPRCasFinder
TAAAGTATCAATAAATAATCCTGTACATCCTTTAATCCTGAGCATCCTGATTCTGACAAAATAAATTATCAATAAATAATCCTGT

>NZ_CP011456|15|15|2575815-2575899|CRISPRCasFinder
TAAAGTATCAATAAATAATCCTGT	ACATCCTTTAATCCTGAGCATCCTGATTCTGACAAAA
TAAATTATCAATAAATAATCCTGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011456.1\|WP_053541258.1\|2575442_2575673_-\|type-II-toxin-antitoxin-system-HicB-family-antitoxin	unknown	unknown	gnl\|CDD\|224514
NZ_CP011456.1\|WP_053539066.1\|2577938_2578145_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053539068.1\|2579156_2579597_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_027400758.1\|2576776_2577196_+\|fatty-acid-synthase	unknown	unknown	gnl\|CDD\|370136
NZ_CP011456.1\|WP_053539059.1\|2563935_2564868_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_CP011456.1\|WP_053539064.1\|2573780_2574968_+\|FtsW/RodA/SpoVE-family-cell-cycle-protein	unknown	unknown	gnl\|CDD\|223843
NZ_CP011456.1\|WP_053539060.1\|2567640_2568522_-\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293801
NZ_CP011456.1\|WP_053539065.1\|2577183_2577519_+\|XisI-protein	unknown	unknown	gnl\|CDD\|341357
NZ_CP011456.1\|WP_053539063.1\|2572580_2573690_+\|glutamate-5-kinase	unknown	unknown	gnl\|CDD\|235460
NZ_CP011456.1\|WP_027400770.1\|2568855_2569653_-\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
NZ_CP011456.1\|WP_053539061.1\|2570107_2571100_+\|phenylalanine--tRNA-ligase-subunit-alpha	unknown	unknown	gnl\|CDD\|234780
NZ_CP011456.1\|WP_027400762.1\|2584495_2584726_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053539070.1\|2581511_2582693_+\|FtsX-like-permease-family-protein	unknown	unknown	gnl\|CDD\|182528
NZ_CP011456.1\|WP_081424204.1\|2569677_2569965_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053539071.1\|2582760_2584260_+\|TolC-family-protein	unknown	unknown	gnl\|CDD\|224455
NZ_CP011456.1\|WP_053539067.1\|2578667_2579054_+\|DUF4879-domain-containing-protein	unknown	unknown	gnl\|CDD\|374441
NZ_CP011456.1\|WP_053539069.1\|2579730_2581254_+\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|130902
NZ_CP011456.1\|WP_015080227.1\|2577581_2577890_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|172484
NZ_CP011456.1\|WP_081424203.1\|2566107_2566227_-\|transposase	unknown	unknown	gnl\|CDD\|284650
NZ_CP011456.1\|WP_053539062.1\|2571330_2571894_-\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|226983

Protein	Function_ID	Function_description	E-value
NZ_CP011456.1\|WP_053541258.1\|2575442_2575673_-\|type-II-toxin-antitoxin-system-HicB-family-antitoxin	gnl\|CDD\|224514	COG1598, COG1598, Predicted nuclease of the RNAse H fold, HicB family [General function prediction only].	4.16755e-07
NZ_CP011456.1\|WP_027400758.1\|2576776_2577196_+\|fatty-acid-synthase	gnl\|CDD\|370136	pfam08814, XisH, XisH protein. The fdxN element, along with two other DNA elements, is excised from the chromosome during heterocyst differentiation in cyanobacteria. The xisH as well as the xisF and xisI genes are required.	1.21412e-61
NZ_CP011456.1\|WP_053539059.1\|2563935_2564868_+\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	1.01331e-12
NZ_CP011456.1\|WP_053539064.1\|2573780_2574968_+\|FtsW/RodA/SpoVE-family-cell-cycle-protein	gnl\|CDD\|223843	COG0772, FtsW, Bacterial cell division membrane protein [Cell division and chromosome partitioning].	1.60333e-97
NZ_CP011456.1\|WP_053539060.1\|2567640_2568522_-\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293801	cd07715, TaR3-like_MBL-fold, MBL-fold metallo-hydrolase domain of Myxococcus xanthus TaR3 and related proteins; MBL-fold metallo-hydrolase domain. Myxococcus xanthus Tar3 may function as an ammonium regulator/effector protein involved in biosynthesis of the antibiotic TA. Some are members of this subgroup are annotated as ribonucleases. Members of this subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions.	2.65634e-115
NZ_CP011456.1\|WP_053539065.1\|2577183_2577519_+\|XisI-protein	gnl\|CDD\|341357	cd16382, XisI-like, XisI is FdxN element excision controlling factor protein. This family contains XisI proteins, also known as FdxN element excision controlling factors, and similar proteins. FdxN element is excised from the chromosome during heterocyst differentiation in cyanobacteria. This is accomplished by the large serine recombinase XisF (fdxN element site-specific recombinase). The xisH as well as the xisF and xisI genes are required. XisI may function as recombination directionality factor (RDF), and needs XisH which may function as an endonuclease.	8.34263e-49
NZ_CP011456.1\|WP_053539063.1\|2572580_2573690_+\|glutamate-5-kinase	gnl\|CDD\|235460	PRK05429, PRK05429, gamma-glutamyl kinase; Provisional.	0
NZ_CP011456.1\|WP_027400770.1\|2568855_2569653_-\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	6.56969e-134
NZ_CP011456.1\|WP_053539061.1\|2570107_2571100_+\|phenylalanine--tRNA-ligase-subunit-alpha	gnl\|CDD\|234780	PRK00488, pheS, phenylalanyl-tRNA synthetase subunit alpha; Validated.	0
NZ_CP011456.1\|WP_053539070.1\|2581511_2582693_+\|FtsX-like-permease-family-protein	gnl\|CDD\|182528	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB.	3.68448e-36
NZ_CP011456.1\|WP_053539067.1\|2578667_2579054_+\|DUF4879-domain-containing-protein	gnl\|CDD\|374441	pfam16219, DUF4879, Domain of unknown function (DUF4879). family of short proteins of bacterial proteins of phage origin, exemplified by protein SPBc2p013 from Bacillus phage SPBc2, found in various Bacillus and Pseudomonas species. Structure show unexpected structural similarity to greek key beta barrels from the E-set domain, especially to domains involved in carbohydrate and protein- protein binding. However functional consequences of this similarity are not confirmed.	1.31857e-16
NZ_CP011456.1\|WP_053539071.1\|2582760_2584260_+\|TolC-family-protein	gnl\|CDD\|224455	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion].	9.45194e-21
NZ_CP011456.1\|WP_053539069.1\|2579730_2581254_+\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|130902	TIGR01843, Hemolysin_secretion_protein_D_plasmid, type I secretion membrane fusion protein, HlyD family. Type I secretion is an ABC transport process that exports proteins, without cleavage of any signal sequence, from the cytosol to extracellular medium across both inner and outer membranes. The secretion signal is found in the C-terminus of the transported protein. This model represents the adaptor protein between the ATP-binding cassette (ABC) protein of the inner membrane and the outer membrane protein, and is called the membrane fusion protein. This model selects a subfamily closely related to HlyD; it is defined narrowly and excludes, for example, colicin V secretion protein CvaA and multidrug efflux proteins. [Protein fate, Protein and peptide secretion and trafficking].	4.43785e-22
NZ_CP011456.1\|WP_015080227.1\|2577581_2577890_-\|hypothetical-protein	gnl\|CDD\|172484	PRK13982, PRK13982, bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional.	0.00325888
NZ_CP011456.1\|WP_081424203.1\|2566107_2566227_-\|transposase	gnl\|CDD\|284650	pfam07282, OrfB_Zn_ribbon, Putative transposase DNA-binding domain. This putative domain is found at the C-terminus of a large number of transposase proteins. This domain contains four conserved cysteines suggestive of a zinc binding domain. Given the need for transposases to bind DNA as well as the large number of DNA-binding zinc fingers we hypothesize this domain is DNA-binding.	5.2164e-07
NZ_CP011456.1\|WP_053539062.1\|2571330_2571894_-\|Uma2-family-endonuclease	gnl\|CDD\|226983	COG4636, Uma2, Endonuclease, Uma2 family (restriction endonuclease fold) [General function prediction only].	3.42487e-28

>NZ_CP011456.1|WP_053541258.1|2575442_2575673_-|type-II-toxin-antitoxin-system-HicB-family-antitoxin
MNKKSITAIIHTGDDFGYVAECVEISVVTQGDTLDEVVKNCTDAFFLHLEGENPQDFGLIEHPTIRFIFELQPIYG
>NZ_CP011456.1|WP_053539064.1|2573780_2574968_+|FtsW/RodA/SpoVE-family-cell-cycle-protein
MNLLRLIPIFDNSVSSWGLEARLLRWLTLTWMFIGLIILFSASYPVADARHGDGLYYFKRQILWAIASLIIFNIIVNLPLRKILGVSHWFLIFFLMLIFLTLIPGLGKKAFDAARWIAIGPIPIQPSELIKPFLVLQSATLFGQWEKRPWGIRLSWLGVFGLVLLGILAQPNLSTTALCGMTIWFIALAAGIPYKYLGGTAFGGLLLALLSISIKEYQRKRIMSFMNPWGDATGDGYQLVQSLLAVGSGQTWGSGFGLSQQKLFYLPIQDTDFIFAIFSEEFGFIGGILLLLMLAIFATLGLIIALKSKNLTSKLVAIGVVVVMIGQSLLHIGVTTGALPTTGLPLPMFSYGGNSMVASLVSSALLIRVAREGSEAEVVPLRRTPSEPRTRRRFF
>NZ_CP011456.1|WP_053539063.1|2572580_2573690_+|glutamate-5-kinase
MTKTIVVKIGTSSLTQPETGQLALSSIATLAETLCDLRRQGHRVILVSSGAVGVGCARLGLTERPKTIALKQAVAAVGQGRLMRIYDDLFSILQQPIAQVLLTRADLVQRSRYLNANNTFQELLGLGVIPIVNENDTVAVEELKFGDNDTLSALVASLVEADWLFLLTDVDRLYSADPRSVPDAKPISLVSSMQELTDLQIQTGGQGSQWGTGGMMTKISAARIAIAAGIRTVITQGQFPRNIEKIIQGELIGTHFAPQPEPTSARKRWIAYGLIPGGKLYLDEGAIAAVVKAGKSLLAAGIKAVEGEFDNQEAVQLCDSNGDEIARGLVNYNSEELQKICGRHSREIPSILGYEGADTVIHRDNLVLI
>NZ_CP011456.1|WP_053539062.1|2571330_2571894_-|Uma2-family-endonuclease
MTIATERQITLENFLKLPETKPASEFIKGEILQKPMPQGEHSLIQTTFIEVVNGLTRSQKIAIAFSELRCTFGGSTIVPDIAVFRWERIPTTESGKIANRFEIHPDWVIEILSPEQPQKKVLTKLLHCSRHGTELGWLLNPEEESVLAVFPGQKIEIYEGDDKLPILENINLELTVKEIFGWLSFDS
>NZ_CP011456.1|WP_053539061.1|2570107_2571100_+|phenylalanine--tRNA-ligase-subunit-alpha
MTSNLEDQLLALRQEGETAIASADSLERLEELRVNYLGKKGQLGALLRSMGQMSAEERPKIGAIANTVKEAIQNSLDQQRTTLESAQIQAQLEAETIDVTMPGIYRPQGRIHPLNGIIDQTLDIFVGMGYTVAQGSEMETDYYNFEALNTPPDHPARDMQDTFYLPDGNLLRTHTSSVQIRYMEKEEPPIRVVAPGRVYRRDDVDATHSAVFHQIELLAIDEGLTFTDLKGTVKIFLQSIFGDLPIRFRASYFPFTEPSAEVDLQWKGRWLEVMGCGMVDPNVLKSVGYDPEVYSGFAAGFGVERFAMVLHQIDDIRRLYNSDLRFLQQF
>NZ_CP011456.1|WP_081424204.1|2569677_2569965_-|hypothetical-protein
MPIAYCLLPIAYCLLPIAYCLLPIAYCLLPIAYCLLPIAYCLLPIAYCLLPIAYCLLPIAYCLLPIAYCLLPIAYCLLPIAYCLLPIAYCLLPSS
>NZ_CP011456.1|WP_027400770.1|2568855_2569653_-|5'/3'-nucleotidase-SurE
MKLLVSNDDGISALGIRTLANTLAAAGHEVTVVCPDRERSATGHGLTLLQPIRAEIVESVFHPHIKAWACDGTPSDCVKLGLWALLDSPPDLVLSGINQGANLGTEILYSGTVSAAMEGVIEGIPSIAFSLTSHTHKDFQTAAKFAEILVAKIAAQPLPELMLLNVNVPPLSWEEIAGVTFTRQGVRRYVDVFDKRTDPRGKTYYWLTGEVIEDVEPPIELNLPTHIPLDVHAIQKKYISITPLQYNLTYGHGLNQLSGWEFEFP
>NZ_CP011456.1|WP_053539060.1|2567640_2568522_-|MBL-fold-metallo-hydrolase
MSRIENQFNVQFWGVRGSIPSPGLDTVRYGGNTPCVSMQVGGKRLIFDAGTGLHILGKSLLSQMPVEGHLFFTHSHWDHIQGFPFFTPAFISGNKFDIYGAIAPDGSTIEQQLNDQMLHPNFPVPLQVMQSNLTFHNVQIGQPINIDDIIIETADLNHPGKAVGYRVNWRGSAAVYITDTEHYPDHLDENVLWLARNADVLIYDSTYSDEEYSNPKSPKIGWGHSTWQEAIKVAKAANVKTLVIYHHDPDHNDDYLDRVGEDACASFPGAIMAKEGLVIPVNKEFYPQNGWIV
>NZ_CP011456.1|WP_081424203.1|2566107_2566227_-|transposase
MPLKSRVYVCPDCGHTEYRDLNAAKNIDRWFVDIFIPVA
>NZ_CP011456.1|WP_053539059.1|2563935_2564868_+|alpha/beta-hydrolase
MMSSATINNGTALPTQYYSWQNYRCAYEIHQPINSPATGIPLLLIHPIGVGLSRQFWQRFCREWYDKNHQNYIYNPDLLGCGESDMPALAHTPINWAKQLQYFLQTVIKQPVIIVVQGALLPVAIELVKLEKDLIAGLVLSDPTSRPVITKNAPKWQQNLLWSIFTSPIGNAFFRYARTRKFLHSFSSEKLFALSENVDDEWLNTLMADAKNMNGRYAVFAFLARFWQRDYSHDIASIPHRTLLVVGEKARGISKESKPETPDERLTYYLNCLPQGQGVKIIGKNVMPYEYTQAFVEVVSPFIASISSSI
>NZ_CP011456.1|WP_027400758.1|2576776_2577196_+|fatty-acid-synthase
MPQYDLYHNQVKNALTKDGWVITDDPFILEYKGLRLYADLGAEKLFAAQKMQQKIVIEIKVFNSPSLITELEKTLGQYNIYVSLIKRINPERKLYLAIPEAAYQDFFLKPAIQDILSDQQQINYIIFDPIQEVIVQWIS
>NZ_CP011456.1|WP_053539065.1|2577183_2577519_+|XisI-protein
MDKLEKYRRIIISIVGNHAKYKPSHGKIEALCICDQESDNYLLMDTGWDKTGRVHAVVFHLRIIDGKICIEWDGTERGITAELLELGVEKDDIILGFIRPEYRQFTDFSVA
>NZ_CP011456.1|WP_015080227.1|2577581_2577890_-|hypothetical-protein
MKIILDNLEPNLVENLRYQAEQHGRTLETELKLILTQAVTKNPQENFQEQTLIPLEILAAQVKESLDNTGYNSHEQIIDLIQDVKKEMAEEHLLKAHHHNEL
>NZ_CP011456.1|WP_053539066.1|2577938_2578145_-|hypothetical-protein
MLVALLKNINFGLTYQQPKKATPTLMKLSDYSTKWKHPSKLRKWKKPKEEMLIHKNGLALLNPYRVDI
>NZ_CP011456.1|WP_053539067.1|2578667_2579054_+|DUF4879-domain-containing-protein
MFLKRHNNPIIVTILGLSTIGISVAGMEQAISAPAPALSQVKVIGVNRVPQLCVQTQEVGYGTNQIAQFNGNRLTERSSAPTLGAGRVVTGWTRVWCYQGSFTSGTFTFQATSINFPRNTLSTRLYIR
>NZ_CP011456.1|WP_053539068.1|2579156_2579597_+|hypothetical-protein
MKHSNKLFSVMIGLILSTTAAKAQAGVVTQVVVKNQLKQPVSLVPSSVSQILGTGSPPNKIIPGATQAFTVISPFSNIASIHFSYTTGTQGCRFGTSLTTTPTLFGGQIPKWTKNGSPTGSNVTCDAKITSVNSTNYSYTVEFTLR
>NZ_CP011456.1|WP_053539069.1|2579730_2581254_+|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit
MKNFKFKPGFKWLTISASLTSVFLGCWLIFAIFTQSKIQNIPVRIVTAIQDKVEDKITGESGILKLDNQRNIKSSITGTVEQVLVKIGDKVKKDQILIRLRDTETQIKLQEFASDLKEKNLQLVDKQSSLKRAESKLLETQQEYRNIQSTHGNDINKKKDEKIREFQKRKLEVTRKQQALTVKITDLKEAKIKLQENKQLFAKGFISETELKEQEKKVIQAETDLSNAKDELSLSNLDLDQQKLELQSFWQDVRNNKSEPQQKLKEAKSKVDQTVQELNQAKLALNQIMREIEKLKIQRQKIAEELRKTVITSPIDGVILNLQAKLGDVIEPKGDVLVIGNPAQQIVELKLSPLDATKVKIRQQAEISIIGFQSQKLTGKVQQISLLAGDTQNNNQGADNVKITAIVRLDQVNKNIVSGTPVTVALIIAQRNNVTVIPSEAIQENESETFVWIKDQQSKAFKRIIKPGLQGLDNIEIKSGLKPGDEILIPTLENPLNEGDHVVIKMQ
>NZ_CP011456.1|WP_053539070.1|2581511_2582693_+|FtsX-like-permease-family-protein
MNINDLLSLTSSSLRSNPLRSFLSSLGVFMGVFAVSGTLQVSDIGKIYLKTQLQKMESPQISIQAPYNSVTSQQKKYQSEDLEWLKTKLSGWKYIAPVQNSGSDAIFLGTQKINVESQAVTPDFLPISGRKLIAGKFFTVNDLQQTRSVVVIDRLLAQKLFKGKNSLGKMIYFQNKSYYIQGVIQTRKSNTWGEEQGLILIPLSVYQSLKSSPFFDKITITPKNPENIEQLQNQAINTLKKRFPNVDIYASSNVEEVKSLEKVLNGVTIILLLIGSISLFVGGVGIANITIASVVERTPEIGLRRAIGATQKNILIQFLLEATFISMTGGILAIVTVQGITTITVTLLNLPYQISYETPLVSLSSAIMVGIISSFLPALRASKLDPVEALRSQ
>NZ_CP011456.1|WP_053539071.1|2582760_2584260_+|TolC-family-protein
MNRFLLPISSLLLIFLFPGLGKSQNIANPPSLPKSNSDLQLLLNNSSQELPLKLADSVYLALQNNRDLKIAYLQRILDQKQLAETESQFNPTFTPQLSLNLNNNQTGSNINNNTTALLGANFNLKIPTGGNLSLTWQGQNLLSRTSSLDTSSNTNTLSQSVNLNFSQPLLKAFGTQLNTLSIQRAKLTENANILNIKNTTSQAITNTIVSYRSLLLAQERLKIEQLSFANAKKDLDRLQALFEFGRIPKNDLVERQADIAQQEVNLLNTQSSLEQAISELTKTIDLPITKKLIAMEKPDPPTSLNLPAFTEMLELAKANNTGYLAAVNAVENAKFGIRESKNQQQLDLKLNVSYGFNSASNTQDTNNLSSSLVLNREFGNLSQDNAVVKSEISLQNANYTLAKTQDNLNEELKNKTRNVKDTFKQIELAQQARKLAASKVINAKERMRLSSNISMTDIINFEKSLVDAQNQELNAIINHLNSITQLEQFLGITLSKWVK
>NZ_CP011456.1|WP_027400762.1|2584495_2584726_-|hypothetical-protein
MNTVEIRQQIQEYVDKLSPERLLVAVDFLAYLADRQDNDATEELLKIQGFKEDFAKAKENVKEGKVISVEQLKRKY

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Crispr_ID: NZ_CP011456_16

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011456_16

2584899-2584990

Orphan

Consensus_repeat	Method
ATAAATAATCCTGTACATCCTTTAATCCTGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP011456_16

>merge|NZ_CP011456|16|2584899-2584990|CRISPRCasFinder
ATAAATAATCCTGTACATCCTTTAATCCTGAGCATCCTGATTCTGACAAAATAAAGTATCAATAAATAATCCTGTACATCCTTTAATCCTGA

>NZ_CP011456|16|16|2584899-2584990|CRISPRCasFinder
ATAAATAATCCTGTACATCCTTTAATCCTGA	GCATCCTGATTCTGACAAAATAAAGTATCA
ATAAATAATCCTGTACATCCTTTAATCCTGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011456.1\|WP_053539074.1\|2588891_2589743_-\|site-specific-DNA-methyltransferase	unknown	unknown	gnl\|CDD\|334588
NZ_CP011456.1\|WP_053539066.1\|2577938_2578145_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053539070.1\|2581511_2582693_+\|FtsX-like-permease-family-protein	unknown	unknown	gnl\|CDD\|182528
NZ_CP011456.1\|WP_027400758.1\|2576776_2577196_+\|fatty-acid-synthase	unknown	unknown	gnl\|CDD\|370136
NZ_CP011456.1\|WP_015080216.1\|2594139_2595018_-\|Rpn-family-recombination-promoting-nuclease/putative-transposase	unknown	unknown	gnl\|CDD\|371375
NZ_CP011456.1\|WP_053539075.1\|2590042_2591716_+\|bifunctional-3,4-dihydroxy-2-butanone-4-phosphate-synthase-RibB/GTP-cyclohydrolase-II-RibA	unknown	unknown	gnl\|CDD\|236465
NZ_CP011456.1\|WP_052149937.1\|2592050_2593394_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|379114
NZ_CP011456.1\|WP_053539073.1\|2588039_2588870_+\|ScaI-family-restriction-endonuclease	unknown	unknown	gnl\|CDD\|370567
NZ_CP011456.1\|WP_015080221.1\|2587817_2588039_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP011456.1\|WP_053539076.1\|2593368_2594004_+\|RloB-domain-containing-protein	unknown	unknown	gnl\|CDD\|379341
NZ_CP011456.1\|WP_053539068.1\|2579156_2579597_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053539065.1\|2577183_2577519_+\|XisI-protein	unknown	unknown	gnl\|CDD\|341357
NZ_CP011456.1\|WP_027400762.1\|2584495_2584726_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_015080223.1\|2585178_2586468_+\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NZ_CP011456.1\|WP_053539067.1\|2578667_2579054_+\|DUF4879-domain-containing-protein	unknown	unknown	gnl\|CDD\|374441
NZ_CP011456.1\|WP_053539077.1\|2595123_2595981_-\|N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl\|CDD\|133475
NZ_CP011456.1\|WP_053539071.1\|2582760_2584260_+\|TolC-family-protein	unknown	unknown	gnl\|CDD\|224455
NZ_CP011456.1\|WP_053539069.1\|2579730_2581254_+\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|130902
NZ_CP011456.1\|WP_053539072.1\|2586548_2587607_-\|N-acetyl-gamma-glutamyl-phosphate-reductase	unknown	unknown	gnl\|CDD\|234761
NZ_CP011456.1\|WP_015080227.1\|2577581_2577890_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|172484

Protein	Function_ID	Function_description	E-value
NZ_CP011456.1\|WP_015080223.1\|2585178_2586468_+\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NZ_CP011456.1\|WP_053539074.1\|2588891_2589743_-\|site-specific-DNA-methyltransferase	gnl\|CDD\|334588	pfam01555, N6_N4_Mtase, DNA methylase. Members of this family are DNA methylases. The family contains both N-4 cytosine-specific DNA methylases and N-6 Adenine-specific DNA methylases.	9.37398e-61
NZ_CP011456.1\|WP_027400758.1\|2576776_2577196_+\|fatty-acid-synthase	gnl\|CDD\|370136	pfam08814, XisH, XisH protein. The fdxN element, along with two other DNA elements, is excised from the chromosome during heterocyst differentiation in cyanobacteria. The xisH as well as the xisF and xisI genes are required.	1.21412e-61
NZ_CP011456.1\|WP_015080216.1\|2594139_2595018_-\|Rpn-family-recombination-promoting-nuclease/putative-transposase	gnl\|CDD\|371375	pfam11103, DUF2887, Protein of unknown function (DUF2887). This bacterial family of proteins has no known function. These proteins may be distantly related to the PD(D/E)XK superfamily.	5.01347e-103
NZ_CP011456.1\|WP_053539075.1\|2590042_2591716_+\|bifunctional-3,4-dihydroxy-2-butanone-4-phosphate-synthase-RibB/GTP-cyclohydrolase-II-RibA	gnl\|CDD\|236465	PRK09319, PRK09319, bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase RibB/GTP cyclohydrolase II RibA.	0
NZ_CP011456.1\|WP_052149937.1\|2592050_2593394_+\|ATP-binding-protein	gnl\|CDD\|379114	pfam13304, AAA_21, AAA domain, putative AbiEii toxin, Type IV TA system. Several members are annotated as being of the abortive phage resistance system, in which case the family would be acting as the toxin for a type IV toxin-antitoxin resistance system.	7.37605e-35
NZ_CP011456.1\|WP_053539077.1\|2595123_2595981_-\|N-acetylmuramoyl-L-alanine-amidase	gnl\|CDD\|133475	cd06583, PGRP, Peptidoglycan recognition proteins (PGRPs) are pattern recognition receptors that bind, and in certain cases, hydrolyze peptidoglycans (PGNs) of bacterial cell walls. PGRPs have been divided into three classes: short PGRPs (PGRP-S), that are small (20 kDa) extracellular proteins; intermediate PGRPs (PGRP-I) that are 40-45 kDa and are predicted to be transmembrane proteins; and long PGRPs (PGRP-L), up to 90 kDa, which may be either intracellular or transmembrane. Several structures of PGRPs are known in insects and mammals, some bound with substrates like Muramyl Tripeptide (MTP) or Tracheal Cytotoxin (TCT). The substrate binding site is conserved in PGRP-LCx, PGRP-LE, and PGRP-Ialpha proteins. This family includes Zn-dependent N-Acetylmuramoyl-L-alanine Amidase, EC:3.5.1.28. This enzyme cleaves the amide bond between N-acetylmuramoyl and L-amino acids, preferentially D-lactyl-L-Ala, in bacterial cell walls. The structure for the bacteriophage T7 lysozyme shows that two of the conserved histidines and a cysteine are zinc binding residues. Site-directed mutagenesis of T7 lysozyme indicates that two conserved residues, a Tyr and a Lys, are important for amidase activity.	2.36526e-17
NZ_CP011456.1\|WP_015080221.1\|2587817_2588039_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	2.05609e-14
NZ_CP011456.1\|WP_053539076.1\|2593368_2594004_+\|RloB-domain-containing-protein	gnl\|CDD\|379341	pfam13707, RloB, RloB-like protein. This family includes the RloB protein that is found within a bacterial restriction modification operon. This family includes the AbiLii protein that is found as part of a plasmid encoded phage abortive infection mechanism. Deletion within abiLii abolished the phage resistance. The family includes some proteins annotated as CRISPR Csm2 proteins.	9.79099e-33
NZ_CP011456.1\|WP_053539073.1\|2588039_2588870_+\|ScaI-family-restriction-endonuclease	gnl\|CDD\|370567	pfam09569, RE_ScaI, ScaI restriction endonuclease. This family includes the ScaI (recognizes and cleaves AGT^ACT) restriction endonuclease.	9.62275e-68
NZ_CP011456.1\|WP_053539065.1\|2577183_2577519_+\|XisI-protein	gnl\|CDD\|341357	cd16382, XisI-like, XisI is FdxN element excision controlling factor protein. This family contains XisI proteins, also known as FdxN element excision controlling factors, and similar proteins. FdxN element is excised from the chromosome during heterocyst differentiation in cyanobacteria. This is accomplished by the large serine recombinase XisF (fdxN element site-specific recombinase). The xisH as well as the xisF and xisI genes are required. XisI may function as recombination directionality factor (RDF), and needs XisH which may function as an endonuclease.	8.34263e-49
NZ_CP011456.1\|WP_053539070.1\|2581511_2582693_+\|FtsX-like-permease-family-protein	gnl\|CDD\|182528	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB.	3.68448e-36
NZ_CP011456.1\|WP_053539067.1\|2578667_2579054_+\|DUF4879-domain-containing-protein	gnl\|CDD\|374441	pfam16219, DUF4879, Domain of unknown function (DUF4879). family of short proteins of bacterial proteins of phage origin, exemplified by protein SPBc2p013 from Bacillus phage SPBc2, found in various Bacillus and Pseudomonas species. Structure show unexpected structural similarity to greek key beta barrels from the E-set domain, especially to domains involved in carbohydrate and protein- protein binding. However functional consequences of this similarity are not confirmed.	1.31857e-16
NZ_CP011456.1\|WP_053539071.1\|2582760_2584260_+\|TolC-family-protein	gnl\|CDD\|224455	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion].	9.45194e-21
NZ_CP011456.1\|WP_053539069.1\|2579730_2581254_+\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|130902	TIGR01843, Hemolysin_secretion_protein_D_plasmid, type I secretion membrane fusion protein, HlyD family. Type I secretion is an ABC transport process that exports proteins, without cleavage of any signal sequence, from the cytosol to extracellular medium across both inner and outer membranes. The secretion signal is found in the C-terminus of the transported protein. This model represents the adaptor protein between the ATP-binding cassette (ABC) protein of the inner membrane and the outer membrane protein, and is called the membrane fusion protein. This model selects a subfamily closely related to HlyD; it is defined narrowly and excludes, for example, colicin V secretion protein CvaA and multidrug efflux proteins. [Protein fate, Protein and peptide secretion and trafficking].	4.43785e-22
NZ_CP011456.1\|WP_053539072.1\|2586548_2587607_-\|N-acetyl-gamma-glutamyl-phosphate-reductase	gnl\|CDD\|234761	PRK00436, argC, N-acetyl-gamma-glutamyl-phosphate reductase; Validated.	0
NZ_CP011456.1\|WP_015080227.1\|2577581_2577890_-\|hypothetical-protein	gnl\|CDD\|172484	PRK13982, PRK13982, bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional.	0.00325888

>NZ_CP011456.1|WP_027400762.1|2584495_2584726_-|hypothetical-protein
MNTVEIRQQIQEYVDKLSPERLLVAVDFLAYLADRQDNDATEELLKIQGFKEDFAKAKENVKEGKVISVEQLKRKY
>NZ_CP011456.1|WP_053539071.1|2582760_2584260_+|TolC-family-protein
MNRFLLPISSLLLIFLFPGLGKSQNIANPPSLPKSNSDLQLLLNNSSQELPLKLADSVYLALQNNRDLKIAYLQRILDQKQLAETESQFNPTFTPQLSLNLNNNQTGSNINNNTTALLGANFNLKIPTGGNLSLTWQGQNLLSRTSSLDTSSNTNTLSQSVNLNFSQPLLKAFGTQLNTLSIQRAKLTENANILNIKNTTSQAITNTIVSYRSLLLAQERLKIEQLSFANAKKDLDRLQALFEFGRIPKNDLVERQADIAQQEVNLLNTQSSLEQAISELTKTIDLPITKKLIAMEKPDPPTSLNLPAFTEMLELAKANNTGYLAAVNAVENAKFGIRESKNQQQLDLKLNVSYGFNSASNTQDTNNLSSSLVLNREFGNLSQDNAVVKSEISLQNANYTLAKTQDNLNEELKNKTRNVKDTFKQIELAQQARKLAASKVINAKERMRLSSNISMTDIINFEKSLVDAQNQELNAIINHLNSITQLEQFLGITLSKWVK
>NZ_CP011456.1|WP_053539070.1|2581511_2582693_+|FtsX-like-permease-family-protein
MNINDLLSLTSSSLRSNPLRSFLSSLGVFMGVFAVSGTLQVSDIGKIYLKTQLQKMESPQISIQAPYNSVTSQQKKYQSEDLEWLKTKLSGWKYIAPVQNSGSDAIFLGTQKINVESQAVTPDFLPISGRKLIAGKFFTVNDLQQTRSVVVIDRLLAQKLFKGKNSLGKMIYFQNKSYYIQGVIQTRKSNTWGEEQGLILIPLSVYQSLKSSPFFDKITITPKNPENIEQLQNQAINTLKKRFPNVDIYASSNVEEVKSLEKVLNGVTIILLLIGSISLFVGGVGIANITIASVVERTPEIGLRRAIGATQKNILIQFLLEATFISMTGGILAIVTVQGITTITVTLLNLPYQISYETPLVSLSSAIMVGIISSFLPALRASKLDPVEALRSQ
>NZ_CP011456.1|WP_053539069.1|2579730_2581254_+|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit
MKNFKFKPGFKWLTISASLTSVFLGCWLIFAIFTQSKIQNIPVRIVTAIQDKVEDKITGESGILKLDNQRNIKSSITGTVEQVLVKIGDKVKKDQILIRLRDTETQIKLQEFASDLKEKNLQLVDKQSSLKRAESKLLETQQEYRNIQSTHGNDINKKKDEKIREFQKRKLEVTRKQQALTVKITDLKEAKIKLQENKQLFAKGFISETELKEQEKKVIQAETDLSNAKDELSLSNLDLDQQKLELQSFWQDVRNNKSEPQQKLKEAKSKVDQTVQELNQAKLALNQIMREIEKLKIQRQKIAEELRKTVITSPIDGVILNLQAKLGDVIEPKGDVLVIGNPAQQIVELKLSPLDATKVKIRQQAEISIIGFQSQKLTGKVQQISLLAGDTQNNNQGADNVKITAIVRLDQVNKNIVSGTPVTVALIIAQRNNVTVIPSEAIQENESETFVWIKDQQSKAFKRIIKPGLQGLDNIEIKSGLKPGDEILIPTLENPLNEGDHVVIKMQ
>NZ_CP011456.1|WP_053539068.1|2579156_2579597_+|hypothetical-protein
MKHSNKLFSVMIGLILSTTAAKAQAGVVTQVVVKNQLKQPVSLVPSSVSQILGTGSPPNKIIPGATQAFTVISPFSNIASIHFSYTTGTQGCRFGTSLTTTPTLFGGQIPKWTKNGSPTGSNVTCDAKITSVNSTNYSYTVEFTLR
>NZ_CP011456.1|WP_053539067.1|2578667_2579054_+|DUF4879-domain-containing-protein
MFLKRHNNPIIVTILGLSTIGISVAGMEQAISAPAPALSQVKVIGVNRVPQLCVQTQEVGYGTNQIAQFNGNRLTERSSAPTLGAGRVVTGWTRVWCYQGSFTSGTFTFQATSINFPRNTLSTRLYIR
>NZ_CP011456.1|WP_053539066.1|2577938_2578145_-|hypothetical-protein
MLVALLKNINFGLTYQQPKKATPTLMKLSDYSTKWKHPSKLRKWKKPKEEMLIHKNGLALLNPYRVDI
>NZ_CP011456.1|WP_015080227.1|2577581_2577890_-|hypothetical-protein
MKIILDNLEPNLVENLRYQAEQHGRTLETELKLILTQAVTKNPQENFQEQTLIPLEILAAQVKESLDNTGYNSHEQIIDLIQDVKKEMAEEHLLKAHHHNEL
>NZ_CP011456.1|WP_053539065.1|2577183_2577519_+|XisI-protein
MDKLEKYRRIIISIVGNHAKYKPSHGKIEALCICDQESDNYLLMDTGWDKTGRVHAVVFHLRIIDGKICIEWDGTERGITAELLELGVEKDDIILGFIRPEYRQFTDFSVA
>NZ_CP011456.1|WP_027400758.1|2576776_2577196_+|fatty-acid-synthase
MPQYDLYHNQVKNALTKDGWVITDDPFILEYKGLRLYADLGAEKLFAAQKMQQKIVIEIKVFNSPSLITELEKTLGQYNIYVSLIKRINPERKLYLAIPEAAYQDFFLKPAIQDILSDQQQINYIIFDPIQEVIVQWIS
>NZ_CP011456.1|WP_015080223.1|2585178_2586468_+|phosphopyruvate-hydratase
MTKFLDTAIEAIVSREILDSRGRPTLEAEVHLAGGAVGLAQVPSGASTGTFEAHELRDGDKSRYGGKGVLTAVKNANEILAPKLLGLDVLNQELLDRTMIATDGSANKSNLGANAILGISLAAAKAGAAALDIPLYRYLGGPLANLLPVPLMNVINGGAHASNNVDFQEFMIVPIGAPSFKEALRWGAEVFATLSKVLDDKGLLTGVGDEGGFAPNLESNQVALELLVAAIKQAGYKPGEEVALALDVAASEFYKNGQYVYDGKPHSPVEFIDYLGQLVDQYPIVSIEDGLHEEDWQSWQLLTQKIGSKVQLVGDDLFVTNATRLQKGIEQKAANSILIKLNQIGSLTETLETIDLATRNGFRSVISHRSGETEDTTIADLAVATRAGQIKTGSLCRSERVAKYNRLLRIEHELGDRAVYAGTVGLGPK
>NZ_CP011456.1|WP_053539072.1|2586548_2587607_-|N-acetyl-gamma-glutamyl-phosphate-reductase
MGNLRRVPVGIVGASGYGGVQLVRLLMDHPEVEIVYLGGESSTGKSFADLYPHFANIVNLPIEAVEPEVIASRCEVVFLSLPNGLACQIAPQLIEKGCKVLDLSADYRFGDLKTYTDWYGTERSDRSTAATAVYGLPELYRDRIAESNLIGCPGCYPTASLLALSPLLKQGLIVPETAIIDAKSGTSGGGRQAKVNLLLAEADNSLGAYNVGRHRHTPEIEQICSELAGHEVKIQFTPHLIPMVRGILATVYATMRDPGLVRDDLITIYNAFYRNSPWVKICNSGTYPQTKWACGSNSCYIGIEVDPRTGRVIVMSAIDNLIKGQAGQAIQCMNLMLGWDETLGLPKVGFYP
>NZ_CP011456.1|WP_015080221.1|2587817_2588039_+|helix-turn-helix-transcriptional-regulator
MTENSQLQKFGEYIRTIRKAQNLSQEQLAELSGLHRNYIGGVERGERNIALLNIIRIAQALGISPSELLKGLD
>NZ_CP011456.1|WP_053539073.1|2588039_2588870_+|ScaI-family-restriction-endonuclease
MVFPYASIPVEKWADKTKELIEEHPLKPNVIREVALKSWQLLWQTKIGEEDTYLSLAEIDPPAIMVGYFFEKLFAKELQKRYPEEWRGTQCKDEKDIVYLKDTRYSIEIKTSGQLGTKIFGNRSYGQKAKDENNEELAKKEKSGYYITANFYQQSLTLLRFGWIDHEDWNAQKSATGQASGLDQKVYEHKLFTISGEYILDSPVNLLCKVGDVIANEMNKEGIKIIQELSDYQGNNQTVKKAKVQEKYHNILKLNSGIEKFALGKNIINSVWWWLT
>NZ_CP011456.1|WP_053539074.1|2588891_2589743_-|site-specific-DNA-methyltransferase
MNLTDISKLLGKPYFQASNCLIYNLDCLEAMTILPDESINLTVTSPPYNIGKEYENLLPLDDYINWCEQWIKEVYRLTLCDGAFWLNLGYLSIKNRAKAIPISYLLWDKIPFYLIQEIVWNYGAGVAGSKFFSPRNEKFLWYVKNSEAYTFNLDDIRDPNVKYPNQKKNGKIRVNPLGKNPTDVWEFPKVTSGQNRSSKERTPHPAQFPSAVIQRIIQASSNQNQIILDPFLGSGTTAMVALDLNRLVIGFEIRQDYCDIAANRIETFLKEQSCQVEQMSLFL
>NZ_CP011456.1|WP_053539075.1|2590042_2591716_+|bifunctional-3,4-dihydroxy-2-butanone-4-phosphate-synthase-RibB/GTP-cyclohydrolase-II-RibA
MSQSNITQTFKFDSIDAALADLKAGRVIVVVDDENRENEGDLICAAQFATPDMINFMAVEARGLICLAMTGDRLDELDLPLMVSTLTDTNQTAFTVSIDAGPHLGVSTGISAEDRARTIQVALNPGTKPEELRRPGHIFPLRARPGGVLKRAGHTEAAVDLSRLAGLYPAGVICEIQNPDGSMARLNQLVEYAKNHHLKIISIADLISYRLQNDRLIYREIITKLPSQFGQFDIYGYRHTLDNTEHVAIVKGDPANFRDEAVMVRMHSECLTGDALGSLRCDCRMQLQAALKMIENAGQGVVVYLRQEGRGIGLVNKLKAYSLQDMGLDTVEANERLGFPADLRDYGMGAQILMDLGIKKIRLITNNPRKIAGVKGYGLDVVDRVPLLIESNDFNSYYLATKAKKLGHMLLQTYLVTVAIHWQDEPESVTGRYERLEKIRYLSKNQHLLLQEEARPLGIALFDQPSLTVHLGFDQANIAESNWYQQKGHPYLQAICQILDEIATLPYIQKMEFLIATGSDPLSNLQVQLDRQTFSDGVLPSSLRDNLQTQHIYSFSK
>NZ_CP011456.1|WP_052149937.1|2592050_2593394_+|ATP-binding-protein
MLVEFSVENYRSIQEKQTLSMVAAEDATMLESNTFPIPNNNDLRLVTSAAIYGPNASGKSNLLKAMQVLKNLVIKSASRMQTGDKLPVEPFRLNSESAKKPSSFEIIFIRDDIRYEYGVSLNRERIFEEWLIAYPNEVQQNWFSREYLPDNPELKVDEGYKWSFGKGLKGEKKRIQRFVRSNSLFISHAAQNNHPQLTEVFDFFENEINMFSLTERQLREFNFSIRMCEEDNKFREQIVNLLSEADIGISDIRFESEPMDDNIKLVAQNLFSEEFEVRKNANNLLEIDFMKVITIHKMNDSNSEIELEMSDESAGTKRLFNIAGYLLWVLEYGEVLIIDELDRSLHPLLSKALIKMFNNPEINKNNAQLIFTTHDTTLLDDETFRPDQIWFTEKDNSMTKLYSLFDFRPREHESLQKGYLLGRYGAIPFINGFKGGSEKHEKGKIDK
>NZ_CP011456.1|WP_053539076.1|2593368_2594004_+|RloB-domain-containing-protein
MRKGKSTNNLKRSSENKNPRGYFLIVVEGEQTEYNYFESLKRELKLSTTDVKIVPAYGGDPLEIVTTAYDLSQQKQYDQVFCIFDDDNKPDKYKQALSTAKKYNVESITSIPCFEFWFLLHCCYTTSPFSSYKELRPKLESEMRKEGILQKGETYNKSDRLLYEKLKPNQEKAIIHAIKLENNHPNEDGCTKPSTRVHILIDKLQKQKNFE
>NZ_CP011456.1|WP_015080216.1|2594139_2595018_-|Rpn-family-recombination-promoting-nuclease/putative-transposase
MRRDSIFYKLFQQSPTLLFELLTNPPINADAYRFDSVAVKEPKFEIDGVFLPPENEGAGIVYFCEVQFQKDEQLYERVFAESSLYFYRNRVRFSDWQAVIIYPSRNTEQRDIYPHRTLLKGEQVHRVYLNELGDIRQLPLWVALMVLTTVEEEQAPAAARDLLIRTREEDPQPSSRAIIEMITTIMVYKFEKLSRMEVESMLGITLKETRVYQEIKEEGREEGREEGREEGREEATVNVIIRLLTKRFGKISEEMRSSISSLPLPVLEDLSEALLDFTSFADIQTWLKGRVN
>NZ_CP011456.1|WP_053539077.1|2595123_2595981_-|N-acetylmuramoyl-L-alanine-amidase
MKFRAWATRVILIFLMLATLILAVFIGGARQKHNQTIASTSEVTTWNQYSPGQLQSAVTKPENKQKLRPSPTKMNKINPLYITTRDFANYRPKFAQVKVDPSNYGDRYTADINGVPFNNQAIIVLHETTNSTSSAINFFQTRHDDESVQASYHAIITLEGKVIYLVPPEKRAFGAGNSVFKGANGVETVQTNPNLPPSVNNFAYHVSLETPTDAWGKSNIESHSGYTEAQYNSLAWLIAQSQVPDERITTHRAVDVGNGKVDPLSFDGEKFINKLHSFRQLQTFN

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Crispr_ID: NZ_CP011456_17

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011456_17

2608069-2608195

Orphan

Consensus_repeat	Method
CAGGATTAAAGGATGTACAGGATGGTAATTTTTAGATGGTTTGTTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP011456_17

>merge|NZ_CP011456|17|2608069-2608195|CRISPRCasFinder
CAGGATTAAAGGATGTACAGGATGGTAATTTTTAGATGGTTTGTTGGTGATGAAAGTTGTATTTGTCTGAATCAGGATAACCAGGATTAAAGGATGTACAGGATGGTAATTTTTAGATGGTTTGTTG

>NZ_CP011456|17|17|2608069-2608195|CRISPRCasFinder
CAGGATTAAAGGATGTACAGGATGGTAATTTTTAGATGGTTTGTTG	GTGATGAAAGTTGTATTTGTCTGAATCAGGATAAC
CAGGATTAAAGGATGTACAGGATGGTAATTTTTAGATGGTTTGTTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011456.1\|WP_053539082.1\|2599885_2600257_+\|STAS-domain-containing-protein	unknown	unknown	gnl\|CDD\|132914
NZ_CP011456.1\|WP_027400746.1\|2597100_2597487_+\|DUF1257-domain-containing-protein	unknown	unknown	gnl\|CDD\|177092
NZ_CP011456.1\|WP_053537527.1\|2608284_2609304_+\|transposase	unknown	unknown	gnl\|CDD\|376573
NZ_CP011456.1\|WP_053539086.1\|2617073_2617601_-\|single-stranded-DNA-binding-protein	unknown	unknown	gnl\|CDD\|223702
NZ_CP011456.1\|WP_053538738.1\|2612629_2613964_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053539077.1\|2595123_2595981_-\|N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl\|CDD\|133475
NZ_CP011456.1\|WP_081424205.1\|2601036_2601240_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053537530.1\|2611020_2612220_+\|IS4-family-transposase	unknown	unknown	gnl\|CDD\|376573
NZ_CP011456.1\|WP_053539080.1\|2597486_2597942_+\|ferredoxin	unknown	unknown	gnl\|CDD\|379145
NZ_CP011456.1\|WP_081424206.1\|2620382_2621564_-\|FtsX-like-permease-family-protein	unknown	unknown	gnl\|CDD\|130253
NZ_CP011456.1\|WP_053539084.1\|2606485_2607976_+\|amidophosphoribosyltransferase	unknown	unknown	gnl\|CDD\|235998
NZ_CP011456.1\|WP_053539081.1\|2598565_2599612_+\|oxygen-dependent-coproporphyrinogen-oxidase	unknown	unknown	gnl\|CDD\|235413
NZ_CP011456.1\|WP_053539087.1\|2617861_2618962_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|379114
NZ_CP011456.1\|WP_053539085.1\|2614592_2615792_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|224481
NZ_CP011456.1\|WP_027400742.1\|2600368_2601040_+\|photosystem-II-biogenesis-protein-Psp29	unknown	unknown	gnl\|CDD\|371440
NZ_CP011456.1\|WP_053539079.1\|2596851_2597061_+\|DUF2997-domain-containing-protein	unknown	unknown	gnl\|CDD\|314207
NZ_CP011456.1\|WP_053541259.1\|2618958_2619510_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_081424359.1\|2602716_2606271_+\|phosphoribosylformylglycinamidine-synthase-subunit-PurL	unknown	unknown	gnl\|CDD\|234921
NZ_CP011456.1\|WP_053539088.1\|2619590_2620340_-\|DevA-family-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|274374
NZ_CP011456.1\|WP_015078484.1\|2616147_2617026_+\|NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|224995

Protein	Function_ID	Function_description	E-value
NZ_CP011456.1\|WP_053539082.1\|2599885_2600257_+\|STAS-domain-containing-protein	gnl\|CDD\|132914	cd07043, STAS_anti-anti-sigma_factors, Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation. Anti-anti-sigma factors play an important role in the regulation of several sigma factors and their corresponding anti-sigma factors. Upon dephosphorylation they bind the anti-sigma factor and induce the release of the sigma factor from the anti-sigma factor. In a feedback mechanism the anti-anti-sigma factor can be inactivated via phosphorylation by the anti-sigma factor. Well studied examples from Bacillus subtilis are SpoIIAA (regulating sigmaF and sigmaC which play an important role in sporulation) and RsbV (regulating sigmaB involved in the general stress response). The STAS domain is also found in the C- terminal region of sulphate transporters and stressosomes.	8.05835e-27
NZ_CP011456.1\|WP_027400746.1\|2597100_2597487_+\|DUF1257-domain-containing-protein	gnl\|CDD\|177092	CHL00193, ycf35, Ycf35; Provisional.	4.81947e-61
NZ_CP011456.1\|WP_053537527.1\|2608284_2609304_+\|transposase	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	5.60416e-21
NZ_CP011456.1\|WP_053539086.1\|2617073_2617601_-\|single-stranded-DNA-binding-protein	gnl\|CDD\|223702	COG0629, Ssb, Single-stranded DNA-binding protein [DNA replication, recombination, and repair].	1.23859e-22
NZ_CP011456.1\|WP_053539077.1\|2595123_2595981_-\|N-acetylmuramoyl-L-alanine-amidase	gnl\|CDD\|133475	cd06583, PGRP, Peptidoglycan recognition proteins (PGRPs) are pattern recognition receptors that bind, and in certain cases, hydrolyze peptidoglycans (PGNs) of bacterial cell walls. PGRPs have been divided into three classes: short PGRPs (PGRP-S), that are small (20 kDa) extracellular proteins; intermediate PGRPs (PGRP-I) that are 40-45 kDa and are predicted to be transmembrane proteins; and long PGRPs (PGRP-L), up to 90 kDa, which may be either intracellular or transmembrane. Several structures of PGRPs are known in insects and mammals, some bound with substrates like Muramyl Tripeptide (MTP) or Tracheal Cytotoxin (TCT). The substrate binding site is conserved in PGRP-LCx, PGRP-LE, and PGRP-Ialpha proteins. This family includes Zn-dependent N-Acetylmuramoyl-L-alanine Amidase, EC:3.5.1.28. This enzyme cleaves the amide bond between N-acetylmuramoyl and L-amino acids, preferentially D-lactyl-L-Ala, in bacterial cell walls. The structure for the bacteriophage T7 lysozyme shows that two of the conserved histidines and a cysteine are zinc binding residues. Site-directed mutagenesis of T7 lysozyme indicates that two conserved residues, a Tyr and a Lys, are important for amidase activity.	2.36526e-17
NZ_CP011456.1\|WP_053537530.1\|2611020_2612220_+\|IS4-family-transposase	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	3.11832e-09
NZ_CP011456.1\|WP_053539080.1\|2597486_2597942_+\|ferredoxin	gnl\|CDD\|379145	pfam13370, Fer4_13, 4Fe-4S single cluster domain of Ferredoxin I. Fer4_13 is a ferredoxin I from sulfate-reducing bacteria. Chemical sequence analysis suggests that this characteristic [4Fe-4S] cluster sulfur environment is widely distributed among ferredoxins.	7.21589e-18
NZ_CP011456.1\|WP_081424206.1\|2620382_2621564_-\|FtsX-like-permease-family-protein	gnl\|CDD\|130253	TIGR01185, membrane_spanning_subunit, DevC protein. This model describes a predicted membrane subunit, DevC, of an ABC transporter known so far from two species of cyanobacteria. Some experimental data from mutational analysis suggest that this protein along with DevA and DevB encoded in the same operon may be involved in the transport/export of glycolipids. [Transport and binding proteins, Other].	1.10148e-149
NZ_CP011456.1\|WP_053539084.1\|2606485_2607976_+\|amidophosphoribosyltransferase	gnl\|CDD\|235998	PRK07349, PRK07349, amidophosphoribosyltransferase; Provisional.	0
NZ_CP011456.1\|WP_053539081.1\|2598565_2599612_+\|oxygen-dependent-coproporphyrinogen-oxidase	gnl\|CDD\|235413	PRK05330, PRK05330, oxygen-dependent coproporphyrinogen oxidase.	0
NZ_CP011456.1\|WP_053539087.1\|2617861_2618962_+\|ATP-binding-protein	gnl\|CDD\|379114	pfam13304, AAA_21, AAA domain, putative AbiEii toxin, Type IV TA system. Several members are annotated as being of the abortive phage resistance system, in which case the family would be acting as the toxin for a type IV toxin-antitoxin resistance system.	5.70475e-19
NZ_CP011456.1\|WP_053539085.1\|2614592_2615792_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|224481	COG1565, COG1565, Uncharacterized conserved protein [Function unknown].	2.36237e-131
NZ_CP011456.1\|WP_027400742.1\|2600368_2601040_+\|photosystem-II-biogenesis-protein-Psp29	gnl\|CDD\|371440	pfam11264, ThylakoidFormat, Thylakoid formation protein. THF1 is localized to the outer plastid membrane and the stroma. THF1 has a role in sugar signalling. THF1 is also thought to have a role in chloroplast and leaf development. THF1 has been shown to play a crucial role in vesicle-mediated thylakoid membrane biogenesis.	4.29032e-121
NZ_CP011456.1\|WP_053539079.1\|2596851_2597061_+\|DUF2997-domain-containing-protein	gnl\|CDD\|314207	pfam11211, DUF2997, Protein of unknown function (DUF2997). This family of proteins has no known function.	7.10156e-20
NZ_CP011456.1\|WP_081424359.1\|2602716_2606271_+\|phosphoribosylformylglycinamidine-synthase-subunit-PurL	gnl\|CDD\|234921	PRK01213, PRK01213, phosphoribosylformylglycinamidine synthase subunit PurL.	0
NZ_CP011456.1\|WP_053539088.1\|2619590_2620340_-\|DevA-family-ABC-transporter-ATP-binding-protein	gnl\|CDD\|274374	TIGR02982, heterocyst_DevA, ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.	2.83861e-142
NZ_CP011456.1\|WP_015078484.1\|2616147_2617026_+\|NAD(P)-dependent-oxidoreductase	gnl\|CDD\|224995	COG2084, MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism].	5.32875e-79

>NZ_CP011456.1|WP_053539084.1|2606485_2607976_+|amidophosphoribosyltransferase
MIPMNSDEYPQIANNPINSHEERPDKPEEACGVFGIYAPEQDVAKLTYFGLYALQHRGQESAGIATFEGTRVHQHKDMGLVSQVFNETILDQLPGNLAVGHNRYSTTGSSRKVNAQPAVVETRLGLLALAHNGNLVNTVKLREELLKDKFNLITTTDSEMIAYAIAQEVNAGADWVTGATSAFHRCEGAFSLTVATPVGVMGVRDPNGIRPLVIGTLDSDPVRYVLASETCGLDIIGAEYLRDVQPGELVWITETGLESFQWHQQSERKLCIFEMIYFARPDSLMHNETLYSYRMRLGRKMAAEAPVEADLVFGVPDSGIPAAIGFSQASGIAYGEGLIKNRYVGRTFIQPTQAMRESGIKMKLNPLKDVLFGKRVVIIDDSIVRGTTSRKLVQALRDAGVAEVHMRISSPPVTHPCFYGIDTDTQDQLIAATKSVEEIAKQLQVDSLAYLSWEGMLETTREDTNSFCSACFTGDYPVAIPEKMKRSKLILEKALV
>NZ_CP011456.1|WP_081424359.1|2602716_2606271_+|phosphoribosylformylglycinamidine-synthase-subunit-PurL
MESHNHPSAVEPFQGAATGVGGILRDIFTMGARPIALLNSLRFGDLNDPKTQRLFTGVVAGISHYGNCLVSGETFIWKDQEGVHFDTIGNFVESRLPANVHTLEIDDANAVTTLSLDPDQHTVSWQRVRRIFKRCTQNLMTIRTALGRKLIVTPDHPMVICAEGQWDVSPAQSLKVGDQIPIITALPELEPGENQNAPLDLIAGLNPEDASGKDVYVQLPENWQVTEVVRTALRLIEPSATNRHHYLSTGRLPLSHFLALELLLNVSRSDISLFRRGKANYMPAVIQPNELFARLIGYFLSEGCVSQNGNTYKIIFTFAHHETEYVEDVIAGLKQLGLRPCVEKRASTIAVYATSWLLGHFLKNVWQCGTQASNKAFPACIFQWSQNLQREALKGLLRGDGSMTTKTNGNHAKISFGTTSHQLFEQTVILLQSQGVMPYIYQRPAGEGEIEGRKHIHKPLWQLEVSNFAGLKELATVFSQQRNAELAVALNRYNGSKYSFPRFTQSAADVAVVKIKSIECQAVDECDVYDVEVDHTHLFVTSSGIVTHNCVGVPTVGGEVYFDPAYSVNPLVNVMALGLMETSEIVKSGASGFGNPVLYVGSTTGRDGMGGASFASAELTDESMDNRPAVQVGDPFVEKSLIEACLEAFKTGAVVAAQDMGAAGITCSTSEMAAKGGVGIDFDLDKIPVRESGMIPYEYLLSESQERMLFVAEKGREQELIDIFHRWGLQAVVAGTVIEEPIVRIWFEGKIAAEIPADALAENTPLYERELLTEPPEYARKAWQWTSDDLPVCNAAGIEIAGSLETWNQILLTLLDTPSIASKSWVYRQYDHQVQNNTVLLPGGADAAVIRIRPLETPQNPKSKIQNLKSGVAATVDCNSRYVYLDPYEGAKAVVAEAARNLSCVGAEPIAVTDNLNFGSPEKPIGYWQLASACRGLSEGCRELGTPVTGGNVSLYNETFDAEGNPQPIYPTPVVGMVGLIPDLTKICGQGWQNAGDIIYLLGLPIQSKIQNPKSKMELGASEYLATIHHTIAGKPPRIDFDLERLVQKACRDGIRAGWVNSAHDSAEGGLAVAIAESCLSGNLGAEINFPISANHDSRFDEVLFGEGGARILVSVSGENQEKWESYLHRTLPENWQKLGTVTNSGNLEILTADNHKLLQVSLEDMSDRYSLSISKRLAIYTNT
>NZ_CP011456.1|WP_081424205.1|2601036_2601240_-|hypothetical-protein
MIRISSRTKLNSLVERGNREQGTGNREQGTGNREQGTGNRKINCVINSVPLLIPFPIYLLVRDGADS
>NZ_CP011456.1|WP_027400742.1|2600368_2601040_+|photosystem-II-biogenesis-protein-Psp29
MNNVRTVSDTKRTFYTLHTRPINTIYRRVVEELMVEMHLLSVNVDFSYNAIYALGVVTTFDSFMDGYQPEQDKESIFRAICQAVEQDPQRYRQDASRLQALAVSLPVKDLIAGLSRANSLDQDGDLQQQLEAVATNSNFKYSRLFGVGLFALLVQSDHELMKDDKQKSEALKAIANGLNISEDKLIKDLELYSSNLEKMAQALIVMADILTADRKKRDALKSA
>NZ_CP011456.1|WP_053539082.1|2599885_2600257_+|STAS-domain-containing-protein
MINIDQKTCTTEDGHTIMVLTPAGRLDITTAWQFRLKLQECISKHSPHVVVNLGQVNFIDSSGLTSLLAGMREADKISGSFRICNLHSEAKLVFEVTMMDTVFEIFDTEEQVLKTSPRILASQ
>NZ_CP011456.1|WP_053539081.1|2598565_2599612_+|oxygen-dependent-coproporphyrinogen-oxidase
MLTNSQTPTITKESSDLLPGVNAQARVSQFMQNLQDEITQGLEKLDGLGKFQEDSWQRPEGGGGRSRVLRDGAIFEQAGVNFSEVWGSHLPPSILAQRPEATGHGFYATGTSLVLHPRNPYVPTVHLNYRYFEAGPVWWFGGGADLTPYYPFAEDAQHFHNTFKQACDQHHPEYYPVFKRWCDEYFYLKHRDETRGIGGLFLDYQDGQGSIYRGPDPNGEAAIYSNQVGELPSRSWEDIFALVQDCAGAFLPAYVPIVERRHGMEYGDRQRNFQLYRRGRYVEFNLVYDRGTIFGLQTNGRTESILMSLPPLVRWEYGYKPEPNTPEAQLYETFLKPQDWINWKPSQE
>NZ_CP011456.1|WP_053539080.1|2597486_2597942_+|ferredoxin
MSNLQPSPQAEEYNRSGLEPELGSFLRDVPERSGLEPELGGLVRQKGVYVDEITCIGCKHCAHVARNTFFIEEDYGRSRVIRQDGDIEEVVQEAIDTCPVDCIHWVDYTELKNLEEDRKYQVIPVVGYPVEHGVAITEKRRKKQKLKKSNP
>NZ_CP011456.1|WP_027400746.1|2597100_2597487_+|DUF1257-domain-containing-protein
MSHFSQIKTQIRNLESLKDALSDLGIDWKPGPCEVRGYRGQTHAAEVTIEQQNGYDIGFRWNGQEYELVADLQYWQQNLSVDGFVRQVTQRYAYQTIVKETTKVGFQVAEQQQQEDGSIRLVVQRWSA
>NZ_CP011456.1|WP_053539079.1|2596851_2597061_+|DUF2997-domain-containing-protein
METLEFIIYPDGRVQEKVTGIIGASCAEVTAAIEAQLGRVLSNEPTSEFFATNPQQNSVANTQTAHSEW
>NZ_CP011456.1|WP_053539077.1|2595123_2595981_-|N-acetylmuramoyl-L-alanine-amidase
MKFRAWATRVILIFLMLATLILAVFIGGARQKHNQTIASTSEVTTWNQYSPGQLQSAVTKPENKQKLRPSPTKMNKINPLYITTRDFANYRPKFAQVKVDPSNYGDRYTADINGVPFNNQAIIVLHETTNSTSSAINFFQTRHDDESVQASYHAIITLEGKVIYLVPPEKRAFGAGNSVFKGANGVETVQTNPNLPPSVNNFAYHVSLETPTDAWGKSNIESHSGYTEAQYNSLAWLIAQSQVPDERITTHRAVDVGNGKVDPLSFDGEKFINKLHSFRQLQTFN
>NZ_CP011456.1|WP_053537527.1|2608284_2609304_+|transposase
MRLKNFPEVVKTILKPLPKKDYPVLDTFSFVSVWLQYVMDKSIVSMRDLFQRLNNQGIDLKISNFSKASKKRDTQVFLEIITELNNQLRKKKGKEETQALFPIDSTIITLTSKLLWSQGYHQVKLFCGLDSLTSEVGGMVIHFGQGHDHKYGQETVEAIPSKGVGIMDRGFASSERISELKQQKNKAFVLRIKNNVTLEMLENGNCKVGKDEREVEIRVVAFCDIETKSEFRLATNLLNEGEEQVSNQEIMEIYIQRWQIELLWKFLKMHLKLDRLMTKNENGIRIQIMCCLIAYLILQLIEIPQEFGKTLLDKLRYLQSYMCQEISYVHWFRKLIWIR
>NZ_CP011456.1|WP_053537530.1|2611020_2612220_+|IS4-family-transposase
MLPQSYQTIFRKHLSEQQYLTLEILLLLIQAHRQVKLSKLASLFPQPIKYESRKRNLQRFLGIGKLCVKLLWFPLIKYWIRQSLTPKQLNREQRRYFHKKQYQKYGYWMVALDRTQWKGRNIFMVTLVWGTHALPLYWETLNHVGNSNLQTQKRLIKTAIKLLKKCRIVVLADREFHSPKLAKWLDEQGVYFALRQKKNLYFQEKPEQEYQVLKNQGFKPGMSRFYEKVKCGKGDELGLFNIAVYWKRKYRNSGPKEPWYILTNLPTLQQTLCLYRCRWGIEQFFKDCKTGGYNLEDTKVNETRFLALVLLIVIAYSLATMHGQRMKKLGIETYAGRIQQHQDKYPRQSDFSFALYGQLWIYGMELWADLALNLINLKPHKRLFFQRGFQALSLMKQAL
>NZ_CP011456.1|WP_053538738.1|2612629_2613964_-|hypothetical-protein
MTPKTATLEIPELMQFLRQQLHDLPDERKPGNNTKYQVEDAVMAAFSIFFTQSASFLEHQRLMKSNKGKDNAESLFSIKKIPCDNQIRNLLDPVPAATIFMTFQEVYEWLNKNGVLKKFVYLDEEILIALDGTEYFSSKKISCPHCNCRNHRNGTTTYFHGCVTPIVVSPNQKQVINLEPEFIKKQDGHQKQDCENAAVKRWLNKNHQNKYGYAATLLGDDLYSHQPICELALKQGYNFIFVCLEASHKTVYEWLDFLEKSGEVATVETKQWDGRKNLIYRYRYASRVPLKDEDSSLEVNWCEVTVINEKTQKIIYQNNWITNHKITENNVEKIVKAARSRWKVENEGNNILKNHGYNLEHNFGHGENHLCELLLSLNLLAFLFHTVLDLVNYTYQKVRELLVTRTSFFNDMRSLLKFIWFKDWSDFFSFILREYVPFKKINSG
>NZ_CP011456.1|WP_053539085.1|2614592_2615792_+|class-I-SAM-dependent-methyltransferase
MDSHSPLCQAIAHRIITSPQKRITFAQYMDMVLYHPEHGYYSSDAIKIGFRGSDFFTSASLGADFGELLAKQFYQMWEILDQPIHFDLVEMGAGQCILASHILNYIQQEYPDFFGAVKYIIVEKSQSLKQEQQQRLQDFAVDWCNLEEIPSKSINGCFFSNELVDAFPVHQFILAAGELREIYVTLAELNREISEIQIIRDPLFIEVIGEPSTPQLGEYFKLVGIDLSQNTYENGYRSEINLAALNWLGIVADCLERGYVLTIDYGYPAHRYYNPRRSQGTLQCYYQHRHHDNPYINIGQQDITAHVDFTALSSWGERCGLKNMGWTQQGLFLMALGIGERLAALSSQQQPISQLLQRREGLHQLINPGGLGNFGVLVQSQGLTEQEASQPLQGLVVPE
>NZ_CP011456.1|WP_015078484.1|2616147_2617026_+|NAD(P)-dependent-oxidoreductase
MKVAFLGTGLMGLPMAQRLLATDIELIAYNRTPEKLEPLRKAGAQIVTKPREAIRAADCIVLMLSNAAAIYHVLLTDTSWHTLSGRSIIQMGTINPLESQEIRDTVVAAGGEYIEAPVLGSIPEAQTGKLIVMVGGEEEQYQRHLKLLQHFGENPVYIGAVGSASNLTLALNQLIASLTTSFALSLAYIQLQGIDVDLFMQVLRESKLYAPTFDQNLRRMLDGNYNNANLPTKQLIKEIDLFISEAKSLGLNLNSIEGVRQILHATMKMSYPEDDYSSVFPAIREWGEVSGG
>NZ_CP011456.1|WP_053539086.1|2617073_2617601_-|single-stranded-DNA-binding-protein
MNSCILMAEIYDNPQLRHTPDGLEVTEMIVHVAGAKPDDPTHPLKVVGWGNLAKEIHQSYHQGDRVIIEGRLGMNTIDRPEGFKEKRAELTVQKIHAIGQGTYTSSPPAATRTTPAYETPVAPPTYSPTNYESNYPTSAPMPQVTAPQPTYQPAPVQSPSPVGVTPEPDPDDIPF
>NZ_CP011456.1|WP_053539087.1|2617861_2618962_+|ATP-binding-protein
MLKRIYIDNFRCLVNFELNVDSINLFLGGNGAGKSTVFDVLRKIQTFVRGDDKVEKIFKSSDCTRWQNSQIQRFELEIDGNDGSYKYELGIHCKKGKIEYERLLFNNRHLLIHEDKKTQFYKDDHSLSSEFVLSLPHSFLSLLNPEIDNTKLVWFKESLEKIIIIQIVPGQIIDSSKQEETKLNYYTDNFVSWYRYISQDQGKTAELMRVLQDILSGFVSFKFEKYGEDSRILKLRFSSEKEKKIIDYRLSELSDGQKVLMALYTLLYCTESEDYTLCIDEPENFLALPEIQPWLLQLYDFCDEGKLQALLISHHPECINYLLASPIGYWFERQSNAPVRVRKISNEEADDSGLKISELIARGWLK
>NZ_CP011456.1|WP_053541259.1|2618958_2619510_+|hypothetical-protein
MSQRRVQIVILCEDKQQEVFAIHFLKKRGFTLDRNFRTEICPKGAGEQFVREKYAKEVVEYRRRRNRRSGMLIVLIDADKKTVEERLKQLNDALIENSQQLRQPNEAIAVFVPKRNIETWIHYLQGTNVDEETEYTKLKKQSDCKPYVEKLVNQCSQGNLDEKTPPSLKAACGELQRILPLIE
>NZ_CP011456.1|WP_053539088.1|2619590_2620340_-|DevA-family-ABC-transporter-ATP-binding-protein
MSLEVTTIASEVISSSETVISVSNLNHYFGKGALQKQVLVDINLEIKAGEIVIMTGPSGSGKTTLLSLMGGLRSAQNGSLQILGQEMSGAKKGQLTKLRRQIGYIFQAHNLMSFLTAKENVRMSLELHEHHLNGDINAKATAMLEHVGLGERVNYYPENLSGGQKQRVAIARALVSHPKIVLADEPTASLDKQSGRDVVELMQMLAKEQNCTILLVTHDNRILDIADRIIYMEDGQLKSDGIDMGVKVN
>NZ_CP011456.1|WP_081424206.1|2620382_2621564_-|FtsX-like-permease-family-protein
MINKMFRKTPLAWRQLMKEKTRLLVAVAGIAFADILIFIQMGFESALFDSAIQPHRNLQADLVVTNPQFQTLFSVKSFSRERLYQALSYNGVKSVSSIYISTGQWRNPQTKIDRSILVWGVDPSAPGLKFPELQAKKDNLKQLNQVIFDEAGRPEYGEIGSIFRATGKFNAELSGKNVSVKGLFQNGASFAADGNVVTSDSTFLQLFPTRKADQIEVGLITLQPDADLEKVKAQLQIGLNPDPKNPFVEVGTPETFAQKEKTYWANGTGIGFIFSLGVIVGFIVGIVIVYQVLYSDVSDHLPEYATLKAMGYTDNYLLRVLLQEALFLAALGYLPAFFLSFGLYQVTFAATLLPIYMKVDRAINVFFLTVIMCTVSGAIAMRKLRSADPADIF

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Crispr_ID: NZ_CP011456_18

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011456_18

2612249-2612365

Orphan

Consensus_repeat	Method
AGGATTAAAGGATGTACAGGATGGTAACTTTTAGAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP011456_18

>merge|NZ_CP011456|18|2612249-2612365|CRISPRCasFinder
AGGATTAAAGGATGTACAGGATGGTAACTTTTAGATAGTTTGTTGGTGATGAAAGTTGTATTTGTCTGAATCAGGATAACCAGGATTAAAGGATGTACAGGATGGTAATTTTTAGAT

>NZ_CP011456|18|18|2612249-2612365|CRISPRCasFinder
AGGATTAAAGGATGTACAGGATGGTAACTTTTAGAT	AGTTTGTTGGTGATGAAAGTTGTATTTGTCTGAATCAGGATAACC
AGGATTAAAGGATGTACAGGATGGTAATTTTTAGAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011456.1\|WP_053539082.1\|2599885_2600257_+\|STAS-domain-containing-protein	unknown	unknown	gnl\|CDD\|132914
NZ_CP011456.1\|WP_027400746.1\|2597100_2597487_+\|DUF1257-domain-containing-protein	unknown	unknown	gnl\|CDD\|177092
NZ_CP011456.1\|WP_053537527.1\|2608284_2609304_+\|transposase	unknown	unknown	gnl\|CDD\|376573
NZ_CP011456.1\|WP_053539086.1\|2617073_2617601_-\|single-stranded-DNA-binding-protein	unknown	unknown	gnl\|CDD\|223702
NZ_CP011456.1\|WP_053539087.1\|2617861_2618962_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|379114
NZ_CP011456.1\|WP_053538738.1\|2612629_2613964_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053537530.1\|2611020_2612220_+\|IS4-family-transposase	unknown	unknown	gnl\|CDD\|376573
NZ_CP011456.1\|WP_053539090.1\|2622934_2623528_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP011456.1\|WP_053539080.1\|2597486_2597942_+\|ferredoxin	unknown	unknown	gnl\|CDD\|379145
NZ_CP011456.1\|WP_081424206.1\|2620382_2621564_-\|FtsX-like-permease-family-protein	unknown	unknown	gnl\|CDD\|130253
NZ_CP011456.1\|WP_053539084.1\|2606485_2607976_+\|amidophosphoribosyltransferase	unknown	unknown	gnl\|CDD\|235998
NZ_CP011456.1\|WP_081424359.1\|2602716_2606271_+\|phosphoribosylformylglycinamidine-synthase-subunit-PurL	unknown	unknown	gnl\|CDD\|234921
NZ_CP011456.1\|WP_053539085.1\|2614592_2615792_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|224481
NZ_CP011456.1\|WP_027400742.1\|2600368_2601040_+\|photosystem-II-biogenesis-protein-Psp29	unknown	unknown	gnl\|CDD\|371440
NZ_CP011456.1\|WP_053539081.1\|2598565_2599612_+\|oxygen-dependent-coproporphyrinogen-oxidase	unknown	unknown	gnl\|CDD\|235413
NZ_CP011456.1\|WP_053539089.1\|2621597_2622887_-\|ABC-exporter-membrane-fusion-protein	unknown	unknown	gnl\|CDD\|213754
NZ_CP011456.1\|WP_053541259.1\|2618958_2619510_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_081424205.1\|2601036_2601240_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053539088.1\|2619590_2620340_-\|DevA-family-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|274374
NZ_CP011456.1\|WP_015078484.1\|2616147_2617026_+\|NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|224995

Protein	Function_ID	Function_description	E-value
NZ_CP011456.1\|WP_053539082.1\|2599885_2600257_+\|STAS-domain-containing-protein	gnl\|CDD\|132914	cd07043, STAS_anti-anti-sigma_factors, Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation. Anti-anti-sigma factors play an important role in the regulation of several sigma factors and their corresponding anti-sigma factors. Upon dephosphorylation they bind the anti-sigma factor and induce the release of the sigma factor from the anti-sigma factor. In a feedback mechanism the anti-anti-sigma factor can be inactivated via phosphorylation by the anti-sigma factor. Well studied examples from Bacillus subtilis are SpoIIAA (regulating sigmaF and sigmaC which play an important role in sporulation) and RsbV (regulating sigmaB involved in the general stress response). The STAS domain is also found in the C- terminal region of sulphate transporters and stressosomes.	8.05835e-27
NZ_CP011456.1\|WP_027400746.1\|2597100_2597487_+\|DUF1257-domain-containing-protein	gnl\|CDD\|177092	CHL00193, ycf35, Ycf35; Provisional.	4.81947e-61
NZ_CP011456.1\|WP_053537527.1\|2608284_2609304_+\|transposase	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	5.60416e-21
NZ_CP011456.1\|WP_053539086.1\|2617073_2617601_-\|single-stranded-DNA-binding-protein	gnl\|CDD\|223702	COG0629, Ssb, Single-stranded DNA-binding protein [DNA replication, recombination, and repair].	1.23859e-22
NZ_CP011456.1\|WP_053537530.1\|2611020_2612220_+\|IS4-family-transposase	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	3.11832e-09
NZ_CP011456.1\|WP_053539090.1\|2622934_2623528_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	4.11971e-18
NZ_CP011456.1\|WP_053539080.1\|2597486_2597942_+\|ferredoxin	gnl\|CDD\|379145	pfam13370, Fer4_13, 4Fe-4S single cluster domain of Ferredoxin I. Fer4_13 is a ferredoxin I from sulfate-reducing bacteria. Chemical sequence analysis suggests that this characteristic [4Fe-4S] cluster sulfur environment is widely distributed among ferredoxins.	7.21589e-18
NZ_CP011456.1\|WP_081424206.1\|2620382_2621564_-\|FtsX-like-permease-family-protein	gnl\|CDD\|130253	TIGR01185, membrane_spanning_subunit, DevC protein. This model describes a predicted membrane subunit, DevC, of an ABC transporter known so far from two species of cyanobacteria. Some experimental data from mutational analysis suggest that this protein along with DevA and DevB encoded in the same operon may be involved in the transport/export of glycolipids. [Transport and binding proteins, Other].	1.10148e-149
NZ_CP011456.1\|WP_053539084.1\|2606485_2607976_+\|amidophosphoribosyltransferase	gnl\|CDD\|235998	PRK07349, PRK07349, amidophosphoribosyltransferase; Provisional.	0
NZ_CP011456.1\|WP_053539087.1\|2617861_2618962_+\|ATP-binding-protein	gnl\|CDD\|379114	pfam13304, AAA_21, AAA domain, putative AbiEii toxin, Type IV TA system. Several members are annotated as being of the abortive phage resistance system, in which case the family would be acting as the toxin for a type IV toxin-antitoxin resistance system.	5.70475e-19
NZ_CP011456.1\|WP_053539085.1\|2614592_2615792_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|224481	COG1565, COG1565, Uncharacterized conserved protein [Function unknown].	2.36237e-131
NZ_CP011456.1\|WP_027400742.1\|2600368_2601040_+\|photosystem-II-biogenesis-protein-Psp29	gnl\|CDD\|371440	pfam11264, ThylakoidFormat, Thylakoid formation protein. THF1 is localized to the outer plastid membrane and the stroma. THF1 has a role in sugar signalling. THF1 is also thought to have a role in chloroplast and leaf development. THF1 has been shown to play a crucial role in vesicle-mediated thylakoid membrane biogenesis.	4.29032e-121
NZ_CP011456.1\|WP_053539081.1\|2598565_2599612_+\|oxygen-dependent-coproporphyrinogen-oxidase	gnl\|CDD\|235413	PRK05330, PRK05330, oxygen-dependent coproporphyrinogen oxidase.	0
NZ_CP011456.1\|WP_053539089.1\|2621597_2622887_-\|ABC-exporter-membrane-fusion-protein	gnl\|CDD\|213754	TIGR02971, devB-like_secretion_protein, ABC exporter membrane fusion protein, DevB family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. DevB from Anabaena sp. strain PCC 7120 is partially characterized as a membrane fusion protein of the DevBCA ABC exporter, probably a glycolipid exporter, required for heterocyst formation. Most Cyanobacteria have one member only, but Nostoc sp. PCC 7120 has seven members.	1.58972e-95
NZ_CP011456.1\|WP_081424359.1\|2602716_2606271_+\|phosphoribosylformylglycinamidine-synthase-subunit-PurL	gnl\|CDD\|234921	PRK01213, PRK01213, phosphoribosylformylglycinamidine synthase subunit PurL.	0
NZ_CP011456.1\|WP_053539088.1\|2619590_2620340_-\|DevA-family-ABC-transporter-ATP-binding-protein	gnl\|CDD\|274374	TIGR02982, heterocyst_DevA, ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.	2.83861e-142
NZ_CP011456.1\|WP_015078484.1\|2616147_2617026_+\|NAD(P)-dependent-oxidoreductase	gnl\|CDD\|224995	COG2084, MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism].	5.32875e-79

>NZ_CP011456.1|WP_053537530.1|2611020_2612220_+|IS4-family-transposase
MLPQSYQTIFRKHLSEQQYLTLEILLLLIQAHRQVKLSKLASLFPQPIKYESRKRNLQRFLGIGKLCVKLLWFPLIKYWIRQSLTPKQLNREQRRYFHKKQYQKYGYWMVALDRTQWKGRNIFMVTLVWGTHALPLYWETLNHVGNSNLQTQKRLIKTAIKLLKKCRIVVLADREFHSPKLAKWLDEQGVYFALRQKKNLYFQEKPEQEYQVLKNQGFKPGMSRFYEKVKCGKGDELGLFNIAVYWKRKYRNSGPKEPWYILTNLPTLQQTLCLYRCRWGIEQFFKDCKTGGYNLEDTKVNETRFLALVLLIVIAYSLATMHGQRMKKLGIETYAGRIQQHQDKYPRQSDFSFALYGQLWIYGMELWADLALNLINLKPHKRLFFQRGFQALSLMKQAL
>NZ_CP011456.1|WP_053537527.1|2608284_2609304_+|transposase
MRLKNFPEVVKTILKPLPKKDYPVLDTFSFVSVWLQYVMDKSIVSMRDLFQRLNNQGIDLKISNFSKASKKRDTQVFLEIITELNNQLRKKKGKEETQALFPIDSTIITLTSKLLWSQGYHQVKLFCGLDSLTSEVGGMVIHFGQGHDHKYGQETVEAIPSKGVGIMDRGFASSERISELKQQKNKAFVLRIKNNVTLEMLENGNCKVGKDEREVEIRVVAFCDIETKSEFRLATNLLNEGEEQVSNQEIMEIYIQRWQIELLWKFLKMHLKLDRLMTKNENGIRIQIMCCLIAYLILQLIEIPQEFGKTLLDKLRYLQSYMCQEISYVHWFRKLIWIR
>NZ_CP011456.1|WP_053539084.1|2606485_2607976_+|amidophosphoribosyltransferase
MIPMNSDEYPQIANNPINSHEERPDKPEEACGVFGIYAPEQDVAKLTYFGLYALQHRGQESAGIATFEGTRVHQHKDMGLVSQVFNETILDQLPGNLAVGHNRYSTTGSSRKVNAQPAVVETRLGLLALAHNGNLVNTVKLREELLKDKFNLITTTDSEMIAYAIAQEVNAGADWVTGATSAFHRCEGAFSLTVATPVGVMGVRDPNGIRPLVIGTLDSDPVRYVLASETCGLDIIGAEYLRDVQPGELVWITETGLESFQWHQQSERKLCIFEMIYFARPDSLMHNETLYSYRMRLGRKMAAEAPVEADLVFGVPDSGIPAAIGFSQASGIAYGEGLIKNRYVGRTFIQPTQAMRESGIKMKLNPLKDVLFGKRVVIIDDSIVRGTTSRKLVQALRDAGVAEVHMRISSPPVTHPCFYGIDTDTQDQLIAATKSVEEIAKQLQVDSLAYLSWEGMLETTREDTNSFCSACFTGDYPVAIPEKMKRSKLILEKALV
>NZ_CP011456.1|WP_081424359.1|2602716_2606271_+|phosphoribosylformylglycinamidine-synthase-subunit-PurL
MESHNHPSAVEPFQGAATGVGGILRDIFTMGARPIALLNSLRFGDLNDPKTQRLFTGVVAGISHYGNCLVSGETFIWKDQEGVHFDTIGNFVESRLPANVHTLEIDDANAVTTLSLDPDQHTVSWQRVRRIFKRCTQNLMTIRTALGRKLIVTPDHPMVICAEGQWDVSPAQSLKVGDQIPIITALPELEPGENQNAPLDLIAGLNPEDASGKDVYVQLPENWQVTEVVRTALRLIEPSATNRHHYLSTGRLPLSHFLALELLLNVSRSDISLFRRGKANYMPAVIQPNELFARLIGYFLSEGCVSQNGNTYKIIFTFAHHETEYVEDVIAGLKQLGLRPCVEKRASTIAVYATSWLLGHFLKNVWQCGTQASNKAFPACIFQWSQNLQREALKGLLRGDGSMTTKTNGNHAKISFGTTSHQLFEQTVILLQSQGVMPYIYQRPAGEGEIEGRKHIHKPLWQLEVSNFAGLKELATVFSQQRNAELAVALNRYNGSKYSFPRFTQSAADVAVVKIKSIECQAVDECDVYDVEVDHTHLFVTSSGIVTHNCVGVPTVGGEVYFDPAYSVNPLVNVMALGLMETSEIVKSGASGFGNPVLYVGSTTGRDGMGGASFASAELTDESMDNRPAVQVGDPFVEKSLIEACLEAFKTGAVVAAQDMGAAGITCSTSEMAAKGGVGIDFDLDKIPVRESGMIPYEYLLSESQERMLFVAEKGREQELIDIFHRWGLQAVVAGTVIEEPIVRIWFEGKIAAEIPADALAENTPLYERELLTEPPEYARKAWQWTSDDLPVCNAAGIEIAGSLETWNQILLTLLDTPSIASKSWVYRQYDHQVQNNTVLLPGGADAAVIRIRPLETPQNPKSKIQNLKSGVAATVDCNSRYVYLDPYEGAKAVVAEAARNLSCVGAEPIAVTDNLNFGSPEKPIGYWQLASACRGLSEGCRELGTPVTGGNVSLYNETFDAEGNPQPIYPTPVVGMVGLIPDLTKICGQGWQNAGDIIYLLGLPIQSKIQNPKSKMELGASEYLATIHHTIAGKPPRIDFDLERLVQKACRDGIRAGWVNSAHDSAEGGLAVAIAESCLSGNLGAEINFPISANHDSRFDEVLFGEGGARILVSVSGENQEKWESYLHRTLPENWQKLGTVTNSGNLEILTADNHKLLQVSLEDMSDRYSLSISKRLAIYTNT
>NZ_CP011456.1|WP_081424205.1|2601036_2601240_-|hypothetical-protein
MIRISSRTKLNSLVERGNREQGTGNREQGTGNREQGTGNRKINCVINSVPLLIPFPIYLLVRDGADS
>NZ_CP011456.1|WP_027400742.1|2600368_2601040_+|photosystem-II-biogenesis-protein-Psp29
MNNVRTVSDTKRTFYTLHTRPINTIYRRVVEELMVEMHLLSVNVDFSYNAIYALGVVTTFDSFMDGYQPEQDKESIFRAICQAVEQDPQRYRQDASRLQALAVSLPVKDLIAGLSRANSLDQDGDLQQQLEAVATNSNFKYSRLFGVGLFALLVQSDHELMKDDKQKSEALKAIANGLNISEDKLIKDLELYSSNLEKMAQALIVMADILTADRKKRDALKSA
>NZ_CP011456.1|WP_053539082.1|2599885_2600257_+|STAS-domain-containing-protein
MINIDQKTCTTEDGHTIMVLTPAGRLDITTAWQFRLKLQECISKHSPHVVVNLGQVNFIDSSGLTSLLAGMREADKISGSFRICNLHSEAKLVFEVTMMDTVFEIFDTEEQVLKTSPRILASQ
>NZ_CP011456.1|WP_053539081.1|2598565_2599612_+|oxygen-dependent-coproporphyrinogen-oxidase
MLTNSQTPTITKESSDLLPGVNAQARVSQFMQNLQDEITQGLEKLDGLGKFQEDSWQRPEGGGGRSRVLRDGAIFEQAGVNFSEVWGSHLPPSILAQRPEATGHGFYATGTSLVLHPRNPYVPTVHLNYRYFEAGPVWWFGGGADLTPYYPFAEDAQHFHNTFKQACDQHHPEYYPVFKRWCDEYFYLKHRDETRGIGGLFLDYQDGQGSIYRGPDPNGEAAIYSNQVGELPSRSWEDIFALVQDCAGAFLPAYVPIVERRHGMEYGDRQRNFQLYRRGRYVEFNLVYDRGTIFGLQTNGRTESILMSLPPLVRWEYGYKPEPNTPEAQLYETFLKPQDWINWKPSQE
>NZ_CP011456.1|WP_053539080.1|2597486_2597942_+|ferredoxin
MSNLQPSPQAEEYNRSGLEPELGSFLRDVPERSGLEPELGGLVRQKGVYVDEITCIGCKHCAHVARNTFFIEEDYGRSRVIRQDGDIEEVVQEAIDTCPVDCIHWVDYTELKNLEEDRKYQVIPVVGYPVEHGVAITEKRRKKQKLKKSNP
>NZ_CP011456.1|WP_027400746.1|2597100_2597487_+|DUF1257-domain-containing-protein
MSHFSQIKTQIRNLESLKDALSDLGIDWKPGPCEVRGYRGQTHAAEVTIEQQNGYDIGFRWNGQEYELVADLQYWQQNLSVDGFVRQVTQRYAYQTIVKETTKVGFQVAEQQQQEDGSIRLVVQRWSA
>NZ_CP011456.1|WP_053538738.1|2612629_2613964_-|hypothetical-protein
MTPKTATLEIPELMQFLRQQLHDLPDERKPGNNTKYQVEDAVMAAFSIFFTQSASFLEHQRLMKSNKGKDNAESLFSIKKIPCDNQIRNLLDPVPAATIFMTFQEVYEWLNKNGVLKKFVYLDEEILIALDGTEYFSSKKISCPHCNCRNHRNGTTTYFHGCVTPIVVSPNQKQVINLEPEFIKKQDGHQKQDCENAAVKRWLNKNHQNKYGYAATLLGDDLYSHQPICELALKQGYNFIFVCLEASHKTVYEWLDFLEKSGEVATVETKQWDGRKNLIYRYRYASRVPLKDEDSSLEVNWCEVTVINEKTQKIIYQNNWITNHKITENNVEKIVKAARSRWKVENEGNNILKNHGYNLEHNFGHGENHLCELLLSLNLLAFLFHTVLDLVNYTYQKVRELLVTRTSFFNDMRSLLKFIWFKDWSDFFSFILREYVPFKKINSG
>NZ_CP011456.1|WP_053539085.1|2614592_2615792_+|class-I-SAM-dependent-methyltransferase
MDSHSPLCQAIAHRIITSPQKRITFAQYMDMVLYHPEHGYYSSDAIKIGFRGSDFFTSASLGADFGELLAKQFYQMWEILDQPIHFDLVEMGAGQCILASHILNYIQQEYPDFFGAVKYIIVEKSQSLKQEQQQRLQDFAVDWCNLEEIPSKSINGCFFSNELVDAFPVHQFILAAGELREIYVTLAELNREISEIQIIRDPLFIEVIGEPSTPQLGEYFKLVGIDLSQNTYENGYRSEINLAALNWLGIVADCLERGYVLTIDYGYPAHRYYNPRRSQGTLQCYYQHRHHDNPYINIGQQDITAHVDFTALSSWGERCGLKNMGWTQQGLFLMALGIGERLAALSSQQQPISQLLQRREGLHQLINPGGLGNFGVLVQSQGLTEQEASQPLQGLVVPE
>NZ_CP011456.1|WP_015078484.1|2616147_2617026_+|NAD(P)-dependent-oxidoreductase
MKVAFLGTGLMGLPMAQRLLATDIELIAYNRTPEKLEPLRKAGAQIVTKPREAIRAADCIVLMLSNAAAIYHVLLTDTSWHTLSGRSIIQMGTINPLESQEIRDTVVAAGGEYIEAPVLGSIPEAQTGKLIVMVGGEEEQYQRHLKLLQHFGENPVYIGAVGSASNLTLALNQLIASLTTSFALSLAYIQLQGIDVDLFMQVLRESKLYAPTFDQNLRRMLDGNYNNANLPTKQLIKEIDLFISEAKSLGLNLNSIEGVRQILHATMKMSYPEDDYSSVFPAIREWGEVSGG
>NZ_CP011456.1|WP_053539086.1|2617073_2617601_-|single-stranded-DNA-binding-protein
MNSCILMAEIYDNPQLRHTPDGLEVTEMIVHVAGAKPDDPTHPLKVVGWGNLAKEIHQSYHQGDRVIIEGRLGMNTIDRPEGFKEKRAELTVQKIHAIGQGTYTSSPPAATRTTPAYETPVAPPTYSPTNYESNYPTSAPMPQVTAPQPTYQPAPVQSPSPVGVTPEPDPDDIPF
>NZ_CP011456.1|WP_053539087.1|2617861_2618962_+|ATP-binding-protein
MLKRIYIDNFRCLVNFELNVDSINLFLGGNGAGKSTVFDVLRKIQTFVRGDDKVEKIFKSSDCTRWQNSQIQRFELEIDGNDGSYKYELGIHCKKGKIEYERLLFNNRHLLIHEDKKTQFYKDDHSLSSEFVLSLPHSFLSLLNPEIDNTKLVWFKESLEKIIIIQIVPGQIIDSSKQEETKLNYYTDNFVSWYRYISQDQGKTAELMRVLQDILSGFVSFKFEKYGEDSRILKLRFSSEKEKKIIDYRLSELSDGQKVLMALYTLLYCTESEDYTLCIDEPENFLALPEIQPWLLQLYDFCDEGKLQALLISHHPECINYLLASPIGYWFERQSNAPVRVRKISNEEADDSGLKISELIARGWLK
>NZ_CP011456.1|WP_053541259.1|2618958_2619510_+|hypothetical-protein
MSQRRVQIVILCEDKQQEVFAIHFLKKRGFTLDRNFRTEICPKGAGEQFVREKYAKEVVEYRRRRNRRSGMLIVLIDADKKTVEERLKQLNDALIENSQQLRQPNEAIAVFVPKRNIETWIHYLQGTNVDEETEYTKLKKQSDCKPYVEKLVNQCSQGNLDEKTPPSLKAACGELQRILPLIE
>NZ_CP011456.1|WP_053539088.1|2619590_2620340_-|DevA-family-ABC-transporter-ATP-binding-protein
MSLEVTTIASEVISSSETVISVSNLNHYFGKGALQKQVLVDINLEIKAGEIVIMTGPSGSGKTTLLSLMGGLRSAQNGSLQILGQEMSGAKKGQLTKLRRQIGYIFQAHNLMSFLTAKENVRMSLELHEHHLNGDINAKATAMLEHVGLGERVNYYPENLSGGQKQRVAIARALVSHPKIVLADEPTASLDKQSGRDVVELMQMLAKEQNCTILLVTHDNRILDIADRIIYMEDGQLKSDGIDMGVKVN
>NZ_CP011456.1|WP_081424206.1|2620382_2621564_-|FtsX-like-permease-family-protein
MINKMFRKTPLAWRQLMKEKTRLLVAVAGIAFADILIFIQMGFESALFDSAIQPHRNLQADLVVTNPQFQTLFSVKSFSRERLYQALSYNGVKSVSSIYISTGQWRNPQTKIDRSILVWGVDPSAPGLKFPELQAKKDNLKQLNQVIFDEAGRPEYGEIGSIFRATGKFNAELSGKNVSVKGLFQNGASFAADGNVVTSDSTFLQLFPTRKADQIEVGLITLQPDADLEKVKAQLQIGLNPDPKNPFVEVGTPETFAQKEKTYWANGTGIGFIFSLGVIVGFIVGIVIVYQVLYSDVSDHLPEYATLKAMGYTDNYLLRVLLQEALFLAALGYLPAFFLSFGLYQVTFAATLLPIYMKVDRAINVFFLTVIMCTVSGAIAMRKLRSADPADIF
>NZ_CP011456.1|WP_053539089.1|2621597_2622887_-|ABC-exporter-membrane-fusion-protein
MSYKQLFKPKNQGLIALIIAATAITGGIAIYGISNFGKMEKSSVTESKPIVPIPQIVTALGRLEPKTEIIKLSAPLALDGDRISELLVKEGDNVKIGQVIAILQSRDLLKKSVIQSQQQVKVAKAKLAQIKAGAKSGEIQEQSAIVERIKAQYAGDKQSQQENIARISAQWEGDRIAQTATINKLTAELKNAESEYKRYEKLFSEGAISNSVIDGKRLNVETAKQTLSESQAILNRINTTANKQLAEAKVALNRINATSNKQINESQGKLNSIAEVRPVDVQLAQTEIESAIANLNRAKTELEAAYIRAPMTGQIIKIHTRVGEKIGDEGIADFAQTNAMMAVAEVYQTDISKIKLGQKAIITSQGFTGELQGTVQQIGLQVKRQNIFGDQPGENLDSRIVEVKILLNPEDSKKVSGLTNLQVQTAIKL
>NZ_CP011456.1|WP_053539090.1|2622934_2623528_-|TetR/AcrR-family-transcriptional-regulator
MPKIVNHEQYRKELLNKCFDLFAEKGYAAITMRQISASLKVSTGTLYHYFPNKQALFEQLVEEISQQDIITALTEFGGKNNLLELMAALGQYLVKNEDYLIKWTYLWVDFCQHQDSKIMLSNSTVFKRANQRCQQVACDLLGVPDVVLASFVLSFVNGVVLEKLWGNENIDFSEQCQLLGEMIVAYLRQKTDFKVSS

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Crispr_ID: NZ_CP011456_19

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011456_19

2750375-2750471

Orphan

Consensus_repeat	Method
AGCGTGGCGTTAGCCATACTCCCGAATGGGCGCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP011456_19

>merge|NZ_CP011456|19|2750375-2750471|CRISPRCasFinder
AGCGTGGCGTTAGCCATACTCCCGAATGGGCGCAGTCCCTGCGCCCCTACCTCCTGATAGCGTAGCGTGGCGTTAGCCATACTCCTGAATGGGCGCA

>NZ_CP011456|19|19|2750375-2750471|CRISPRCasFinder
AGCGTGGCGTTAGCCATACTCCCGAATGGGCGCA	GTCCCTGCGCCCCTACCTCCTGATAGCGT
AGCGTGGCGTTAGCCATACTCCTGAATGGGCGCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011456.1\|WP_053539171.1\|2743229_2743538_+\|HigA-family-addiction-module-antidote-protein	unknown	unknown	gnl\|CDD\|274228
NZ_CP011456.1\|WP_053539170.1\|2742500_2743052_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_081424363.1\|2759566_2761018_+\|precorrin-3B-synthase	unknown	unknown	gnl\|CDD\|236573
NZ_CP011456.1\|WP_053539183.1\|2757879_2759235_+\|bifunctional-UDP-N-acetylglucosamine-diphosphorylase/glucosamine-1-phosphate-N-acetyltransferase-GlmU	unknown	unknown	gnl\|CDD\|184646
NZ_CP011456.1\|WP_053539173.1\|2744304_2744616_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053539176.1\|2749532_2750129_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP011456.1\|WP_053539167.1\|2739337_2741086_+\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP011456.1\|WP_053539179.1\|2752847_2753834_-\|DNA-(cytosine-5-)-methyltransferase	unknown	unknown	gnl\|CDD\|273211
NZ_CP011456.1\|WP_053539181.1\|2755959_2756775_-\|sulfurtransferase	unknown	unknown	gnl\|CDD\|225450
NZ_CP011456.1\|WP_081424362.1\|2744080_2744248_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|369567
NZ_CP011456.1\|WP_053541268.1\|2751014_2751521_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053539182.1\|2756886_2757810_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|368438
NZ_CP011456.1\|WP_053539180.1\|2754406_2755786_-\|glutathione-disulfide-reductase	unknown	unknown	gnl\|CDD\|235701
NZ_CP011456.1\|WP_053539169.1\|2741955_2742504_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053539174.1\|2745263_2746985_+\|precorrin-3B-C(17)-methyltransferase	unknown	unknown	gnl\|CDD\|381173
NZ_CP011456.1\|WP_039202415.1\|2761025_2761652_+\|precorrin-8X-methylmutase	unknown	unknown	gnl\|CDD\|181352
NZ_CP011456.1\|WP_053539178.1\|2751541_2752675_-\|histidinol-phosphate-transaminase	unknown	unknown	gnl\|CDD\|235053
NZ_CP011456.1\|WP_081424212.1\|2747595_2748777_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|369339
NZ_CP011456.1\|WP_053541269.1\|2754111_2754324_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053539168.1\|2741085_2741841_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP011456.1\|WP_053539171.1\|2743229_2743538_+\|HigA-family-addiction-module-antidote-protein	gnl\|CDD\|274228	TIGR02607, Virulence-associated_protein_I, addiction module antidote protein, HigA family. Members of this family form a distinct clade within the larger family HTH_3 of helix-turn-helix proteins, described by pfam01381. Members of this clade are strictly bacterial and nearly always shorter than 110 amino acids. This family includes the characterized member HigA, without which the killer protein HigB cannot be cloned. The hig (host inhibition of growth) system is noted to be unusual in that killer protein is uncoded by the upstream member of the gene pair. [Regulatory functions, DNA interactions, Regulatory functions, Protein interactions, Mobile and extrachromosomal element functions, Other].	2.57894e-22
NZ_CP011456.1\|WP_081424363.1\|2759566_2761018_+\|precorrin-3B-synthase	gnl\|CDD\|236573	PRK09567, nirA, NirA family protein.	3.91258e-145
NZ_CP011456.1\|WP_053539176.1\|2749532_2750129_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	5.55217e-15
NZ_CP011456.1\|WP_053539167.1\|2739337_2741086_+\|serine/threonine-protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	4.37834e-50
NZ_CP011456.1\|WP_053539179.1\|2752847_2753834_-\|DNA-(cytosine-5-)-methyltransferase	gnl\|CDD\|273211	TIGR00675, Modification_methylase, DNA-methyltransferase (dcm). All proteins in this family for which functions are known are DNA-cytosine methyltransferases. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair].	4.34877e-105
NZ_CP011456.1\|WP_053539181.1\|2755959_2756775_-\|sulfurtransferase	gnl\|CDD\|225450	COG2897, SseA, Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism].	5.92981e-101
NZ_CP011456.1\|WP_081424362.1\|2744080_2744248_+\|hypothetical-protein	gnl\|CDD\|369567	pfam07878, RHH_5, CopG-like RHH_1 or ribbon-helix-helix domain, RHH_5. This family contains bacterial proteins that form a ribbon-helix-helix fold. This fold occurs in many examples of bacterial antitoxins.	0.00125859
NZ_CP011456.1\|WP_053539183.1\|2757879_2759235_+\|bifunctional-UDP-N-acetylglucosamine-diphosphorylase/glucosamine-1-phosphate-N-acetyltransferase-GlmU	gnl\|CDD\|184646	PRK14360, glmU, bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU.	0
NZ_CP011456.1\|WP_053539182.1\|2756886_2757810_+\|hypothetical-protein	gnl\|CDD\|368438	pfam05430, Methyltransf_30, S-adenosyl-L-methionine-dependent methyltransferase. This family is a S-adenosyl-L-methionine (SAM)-dependent methyltransferase. It is often found in association with pfam01266, where it is responsible for catalyzing the transfer of a methyl group from S-adenosyl-L-methionine to 5-aminomethyl-2-thiouridine to form 5-methylaminomethyl-2-thiouridine.	4.42473e-40
NZ_CP011456.1\|WP_053539180.1\|2754406_2755786_-\|glutathione-disulfide-reductase	gnl\|CDD\|235701	PRK06116, PRK06116, glutathione reductase; Validated.	0
NZ_CP011456.1\|WP_053539174.1\|2745263_2746985_+\|precorrin-3B-C(17)-methyltransferase	gnl\|CDD\|381173	cd11646, Precorrin_3B_C17_MT, Precorrin-3B C(17)-methyltransferase (also named CobJ or CbiH). Precorrin-3B C(17)-methyltransferase participates in the pathway toward the biosynthesis of cobalamin (vitamin B12). There are two distinct cobalamin biosynthetic pathways. The aerobic pathway requires oxygen, and cobalt is inserted late in the pathway; the anaerobic pathway does not require oxygen, and cobalt insertion is the first committed step towards cobalamin synthesis. This model includes CobJ of the aerobic pathway and CbiH of the anaerobic pathway, both as stand-alone enzymes and when CobJ or CbiH form part of bifunctional enzymes, such as in Mycobacterium tuberculosis CobIJ where CobJ fuses with a precorrin-2 C(20)-methyltransferase domain, or Bacillus megaterium CbiH60, where CbiH is fused to a nitrite and sulfite reductase-like domain. In the aerobic pathway, once CobG has generated precorrin-3b, CobJ catalyzes the methylation of precorrin-3b at C-17 to form precorrin-4 (the extruded methylated C-20 fragment is left attached as an acyl group at C-1). In the corresponding anaerobic pathway, CbiH carries out this ring contraction, using cobalt-precorrin-3b as a substrate to generate a tetramethylated delta-lactone.	3.28305e-130
NZ_CP011456.1\|WP_039202415.1\|2761025_2761652_+\|precorrin-8X-methylmutase	gnl\|CDD\|181352	PRK08285, cobH, precorrin-8X methylmutase; Reviewed.	9.58111e-135
NZ_CP011456.1\|WP_053539178.1\|2751541_2752675_-\|histidinol-phosphate-transaminase	gnl\|CDD\|235053	PRK02610, PRK02610, histidinol-phosphate transaminase.	0
NZ_CP011456.1\|WP_081424212.1\|2747595_2748777_-\|hypothetical-protein	gnl\|CDD\|369339	pfam07382, HC2, Histone H1-like nucleoprotein HC2. This family contains the bacterial histone H1-like nucleoprotein HC2 (approximately 200 residues long), which seems to be found mostly in Chlamydia. HC2 functions in DNA condensation, although it has been suggested that it also has other roles.	0.000153901

>NZ_CP011456.1|WP_053539176.1|2749532_2750129_+|GNAT-family-N-acetyltransferase
MKSWFFNPTQPPVNRETATLTIGKLQIRVATPDDLISIAQIVAESFHSQEGLWSWAFPLFRIGIYEDLRHRINSPTPHHICLVAVDTATENQKIMGTIEMSVRGNYPWIGVNPGFPYISNLAVDPGCRRLGVGSSLLIRCEQISQEWGFQDLYLHVLEHNHHARQLYFKLAYRVHKVESPWDALFLNRSREILLHKRI
>NZ_CP011456.1|WP_081424212.1|2747595_2748777_-|hypothetical-protein
MMPTLINNHLSDSSITSQPLRRHSDPPWLWTVVCIGSVSIHLLVFWLMRSSNEFQAWFPRSNQSSIPIDIIEIASEPKSTIKHQSTTPKIKPQSSFSSSPKSPPTTPNNQNDGEIISKIHLTEQDKTQKPEVRKIEVRKIEVKKPEVRKIEVKKPEVRKIEVEKPEVRKIEVEKPEPEKTEVEKSRVRQQFYPTNPIPEATPEATPIIPDSELPWNRRQEVKLGKGTLLRQDIPTDSPTPTAEPSVNPNREPEASPTTNGGGAIATVSPLLKEEVSELIQQKQLITDALPDVLAEYKGSTEKDLEASILPSDEDLKPANILASLVIDKNGKFQQAIIITIEPAALRSQANIYEQALNQIFAQESFLAAYNQDGSKPDLSNLYIRLKIKSINSP
>NZ_CP011456.1|WP_053539174.1|2745263_2746985_+|precorrin-3B-C(17)-methyltransferase
MNIRVCPAVVVLSQNSVTVGRRITSVLAGAKLYGLVNRTHDVDISFTNFGETLRELFAAGTPIIGICAAGILIRTIAPLLTDKGQEPPVLAVAEDGSAVVPLLGGLSGVNDLARQVGSALNIQPAITTTGDIRFHTALLSPPAGYHLANPEHGKKFIADLLAGGKVKLQGIAPWLSESNLPIDENGELIIQITENLGNSDPNCLVYHPGKIAIALLAEGNALTKPEPDTITQIHQILAESNLAPAAVAGIFAPLQLANNSQLHSIATTLGVPTRFLPTNELTELVLAATGADSRIVSSPFSQIAVAISTQIINPDTIGQPQGKLAIIGTGPGASQWMSPQVKEILAAATDLVGYKTYINLIGHLADGKRVHESDNRVEAERAYQALDLAASGKYVAVVSSGDPGIYAMAAAVFEVLEQYHKPEWQTIDIQVAPGISAMQAAAATIGAPLGHDFCVISLSDILKPWEIIAQRITAAAKSDFVIAFYNPVSKERTWQLAAAKKILMEHRKPDTPVVLGRNLGRKGEEVQVTTLKELEPALADMRTVIIIGSSHTRQIQQDHNIWVYTSRRYNSQE
>NZ_CP011456.1|WP_053539173.1|2744304_2744616_+|hypothetical-protein
MNTPPVDRLDRIEAILERVAVQQETTAVNLTELIYKVDDFMGTATSVLGRNAILNDVVVGLNETVGRLDTNLATLQSNFAENQKSTNAALERLEAILIKLMDS
>NZ_CP011456.1|WP_081424362.1|2744080_2744248_+|hypothetical-protein
MGQTKKAKITFTCSYELREELESIASSEDRTLSNLVERLVTRAVQIYKPEDQKAS
>NZ_CP011456.1|WP_053539171.1|2743229_2743538_+|HigA-family-addiction-module-antidote-protein
MENNLLHNPHAGEILKYEFLEELDISENTLAVNLGLTYPTIQGIITGKLKMTADIDLRLCRYFRLSDGYFLRLQNAYEIMEAKRNLGEILNQIIPYSLMVTD
>NZ_CP011456.1|WP_053539170.1|2742500_2743052_+|hypothetical-protein
MTSSYIVLEGNKNQEILEKLLPKNLIQDVKIVVGESQYEVRSLASSLIATRHIPVILILDANTDNESQVFEKRDLVNYLLRRAAAKTPFQVSLAIPEIEIIFLQNKPLIEKIAQREFNDLEWQLAQSKPKEFLETVLGKEQSISEKIFSNINDEEIKILQQHSLIQEIIEFLSSLIPSFVAIN
>NZ_CP011456.1|WP_053539169.1|2741955_2742504_+|hypothetical-protein
MTTNAEYKARITSYKWDDLIKLWSEIESGNTPNWDAGKALEYLVLRAFQLNNAEVTWPYSVYLDGEEIEQIDGVVYADGLSCIIECKDTAKPVKIEPIAKLRNQLLRRPAATIGSIFSRSGFTEASETLAGFVAPQTILLWGGEEIKYSLENECIRRALIKKYRICVEQGLANYNIKTEVLS
>NZ_CP011456.1|WP_053539168.1|2741085_2741841_+|hypothetical-protein
MKFTVKGLITLFVTGSALFLTPMRSDAQVNMKSLAEVADSCQKDVPSKKYYQQMLFNVDRWNNEYFRFPNLEVCIESRYHYSLILDKFPELASTGEILPGYPSSVAIGKLARIHGYPHQLLDCLVTQDASSQECSTTKNSISTGYKIRNADPYYYHDLQYIVYVCPSCIVAHDEVSGSGEIILKSFIEWFLKLDKPQRREVFSLLENADKAGRLRWLLYEESQKAVKEYQETRARVRQQEQERRKRELLGN
>NZ_CP011456.1|WP_053539167.1|2739337_2741086_+|serine/threonine-protein-kinase
MSYCINPHCPKPIDLANANNPICRNCGSQLLLQNRYRVLKQLGQGGFGNTFEIDDGGKTKVLKVLTENNPKAVELFQQEAKVLSQLNSVGIPKVEADGYFTVLPKNISIPLHCLVMEKIEGVNLEQWMEFRNYQTISEKEALNWLKQIVEILALVHAQKYFHRDIKPQNIMLRPSGQLVLIDFGAVRQITTTILAGNSHTRIISQGYSPPEQQNGYSVQQSDFFALGRTFIFLLTGKEPQDKAIYDPLTNELHWRKYAVNISPLLADLIDNLIAPTANQRPENTRVILQRLQKIEKALNQPYIFGNTTNIQSKNSSLPTVSVSPGKPVQPAAQPNLKNRKKWKWLIGLGVGYFAIAALNQPNNKNIVGTEEKIPVVSPSISNSSPVIPFSESTPKAKTQIQPSPVNVISSEDLQAEQAKREEIEKREAALKAEGERKEAIEKQRKLESAAKAEQERVEAIRKEQAAKEAQEKLEAVIRERENQAAILAQQKEQAALREKQRQQAAIQTEKAKQALRRKPPKTILVTPKKRQLPAKPQKARKKQENTPRSHDNVVDVTKPWENTHPIPKASDELEQVIREGNQ
>NZ_CP011456.1|WP_053541268.1|2751014_2751521_+|hypothetical-protein
MSNYHIQNSVINQIIMPDGNGQFNGSNLLTLIHGGKVFMVNSRRRNGLILFKEYHAEFAGPGAAIGGDHDSDCQGILPIGNLSLLTPESHEHRQKAYLLRRQWIRLIKQITESPIAKERVQKILDQFEVFFPSEIVACIPDEAFAMLVGVLTQTVTIVRRVGIDTKNK
>NZ_CP011456.1|WP_053539178.1|2751541_2752675_-|histidinol-phosphate-transaminase
MLKFIRSDLSQLNAYKAHPGSDSAEPVAIQFDRLDTNESPLDLPPEIKEKLAWTYQQIIETNRYPDGGHETLKNAISQYVNESANLENSTFTAANISVGNGSDELIRSLLIATCLGGEGSILVANPTFSMYGILAQTLGIPVVTVGRNHSNFETDLTAAKSAISQTQNPPIRVVFVVHPNSPTANSLTAAELEWLKSLPEEILVVIDEAYFEFSQTTLAGELLQRPNWVILRTFSKAFRLAAMRVGYCIAHPEAIAILEKVRLPYNLPSFSIAAALMALENRQLLLESIPQTLSERTKMITALSAHPTLEITPSSTNFIYLRIKTDDSQLSTTVLTNLNQKLRNQGTLIRLLPNGLRITIGTPAENTRTLERIQALL
>NZ_CP011456.1|WP_053539179.1|2752847_2753834_-|DNA-(cytosine-5-)-methyltransferase
MIKFIDLFSGTGGFRLAIEKICHNYKIDSQCVFSSDIDINAQKIYSENFGETPIGDITKIDENDIPDHDILLGGFPCQPFSICGELKGFEDTRGTLFFDIARIIKNKQPSAFILENVKQLQGHQQGQTLKIIINTLQELGYYTDYKILNALNFGLPQKRERILIVGLKNQNHYHNFNWPLIKMPMQPLSEILEKSVSEFYYASEKIRQNRLQKVKTEQKYEQPTIWHENKSGNISIHPYSCALRAGASYNYLLVNGERRLTEREMLRLQGFPESYKIVGSYQTMRKLTGNAIAIPCVATVIDSVINAILVNLNVKKISHSHTLYGNEV
>NZ_CP011456.1|WP_053541269.1|2754111_2754324_+|hypothetical-protein
MIIPNFISMTKTELRAYIIAHPNDKAAFHTFIDRFASETPSEIFDIPKSNHELQQVENLIKEKLAETKYQ
>NZ_CP011456.1|WP_053539180.1|2754406_2755786_-|glutathione-disulfide-reductase
MTFDYDLFVIGAGSGGLAASKRAASYGAKVAIAEYDLVGGTCVIRGCVPKKLMVYGSHFPAQFQEAAGYGWTVGDVKFDWEHFITSIDKEVNRLSALHISFLEKAGVELISGRATFIDPHTVEVNGKQYTAAKILIAVGGRPVKPEIPGIEHAITSNEIFHLKTQPKHIAIIGSGYIGSEFACIMRGLGSEVTQIIRKEQILNGFDQDICTSIQEGMSNHGIRIVANTEVTAIEKVDAGLKLTLSGDNQEPIIADVFLIATGRSPNIEGLGLENAQLDCVPSSEEEPGYSTSNAIAVNEYSQTCQPHIYAVGDVTDRLNLTPVAIGEGRAFADTEFGNNRREFSHETVATAVFTTPEAATVGLTEAQARDKFGDDNIKIYRTSFRPMYYTLAGKQEKTMMKLIVDTSTDKILGAHMVGDSAAEIIQGVAIAVKMGATKADFDATVGIHPSAAEEFVTMR
>NZ_CP011456.1|WP_053539181.1|2755959_2756775_-|sulfurtransferase
MNNQFIVSPEWLFENLNNSQVVIVDCRFSLADSQLGKQQYQTNHIPGSYYLDLNQDLSSPVQEHGGRHPLPNITELAEKLSAIGVNSQKTLVVAYDDSRLAFASRLWWLLRYLGHEQVAVLDGGFDRWQKAGYAITDVIPTAERGTFIPQLQADKVVDFTYVKNHQDSQSVVLIDSREGERYRGEKEPIDKIAGHIPGAVNYPWQEVTDASGCVIPQLEQSQRWQNIDTNKEILVYCGSGVTACVNLLSLAIAGIPTAKLYAGSWSDWISY
>NZ_CP011456.1|WP_053539182.1|2756886_2757810_+|hypothetical-protein
MFTPQQTQDGSFTFFSTEFNEAFHSHYGAKQESLLKFAIPTRLPILAETGFVRLLDICYGLGYNTAAALQTIWQVNPRCHVELIGLELNPIVPQAAINHQLFNGWDDKYIKILTQIAFEHQIHIDYLQATLLIGDARNLILQVHESGFQADAIFLDPFSPPQCPQLWTLEFIQKVSECLQENGLLATYSCAAAVRTALLAAGLVVSSTPPIGRRTPGTIAGHPQHEEESTISYLPPLSQTEAEHLLTRAAIPYRDPNLSDTAAMILNRRQEEIQVSTLESSSQWRKRWLRSSTPQEILPEQSTVSND
>NZ_CP011456.1|WP_053539183.1|2757879_2759235_+|bifunctional-UDP-N-acetylglucosamine-diphosphorylase/glucosamine-1-phosphate-N-acetyltransferase-GlmU
MVVVAILAAGKGTRMKSNLPKVLHCLGGRSLVERVIESAEPLSPARKLVIVGYQSTEVKTAMDSIYGVEFVEQAVQLGTGHAIQQLLPHLEGYTGDLLILNGDVPLLRTETLKNLLQTHQENQNSCTILTAQLANPQGYGRVFRNSEGIVQKIVEDKDCTPNQRENDRVNAGIYCFHWPDLAKILPDLQANNSQKEYYLTDAVTQVGKVMAVDVKDNQEILGINDRLQLATANDILQKRIKEKWLLAGVTLIDPASITIDETVELQPDVILEPQTHLRGRTVIQAGSRIGPGSLIENSELGENVTVLYSVITDSVIQSQTRIGPYAHLRGHAEVGVGCRIGNFVELKNAQLGDRTNVAHLSYLGDTTTGTQVNVGAGTITANYDGVKKHRTTIGDRSKIGSNTVLVAPITVGNDVYIAAGSTVTEDVPDDSLVIARSRQVVKPDWKMKTDS
>NZ_CP011456.1|WP_081424363.1|2759566_2761018_+|precorrin-3B-synthase
MQIPFTACPGLFYNTAAQDGLLYRLRIPGGIINYNQFQAIADIADNYGSGYIDITNRANIQIREIKNSINVEVLKKLQALGLASTNAKIDHIRNIMTNPTAGIDGEELLDTRPLVKAWEKYITAHSQLSELSAKFSVCFDGGGKVAVKYQPNDIILAAEIINRNVYLRLYLSYGEKGQPAQDTGILFKPEETTTALAALAQTYLKHIDTRNRRKLRLREIINKITVKEYLHQIQENLNSDILNFTKTPLCASAPLREKTHIGIYPQRQTGLYYIGIVLPLGRLETSQIRGLANIAKRYGDDNIRLTPWQNLLLTDIPQNQISEVDQQIANLGLNSSPTNIKSFLVACSGKKGCAAAATETKDDAINLAKYLENLMILDSPVNIHFSGCSKSCAQHTQADITLLGIITETAKATFPAYQVYVLGHLLYEYVTIAKIPILIQEMLAVYQKQRLSLHETFGQFIDRHSHQLNQLFSQTTPNLTFTT
>NZ_CP011456.1|WP_039202415.1|2761025_2761652_+|precorrin-8X-methylmutase
MFDYIRDGSEIYRNSFEIIRSESNLERFPEDVAKVAVRMIHACGMTDIVKDLEYSSTAVASGKKALIAGAPILCDSYMVAEGVTKKRLPKNNKVLCTLNDPEVPQLAKRLRNTRSAAALEFWRFHIEGAIVVIGNAPTALFRLLEMLDEGVPRPALILGFPVGFVGAAESKAALAADSRNVPFLTLHGRRGGSAIAAAAVNALASEEE

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Crispr_ID: NZ_CP011456_20

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011456_20

2752792-2752885

Orphan

Consensus_repeat	Method
TTCATTCCCATACAGAGTATGGGAATGAGAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP011456_20

>merge|NZ_CP011456|20|2752792-2752885|CRISPRCasFinder
TTCATTCCCATACAGAGTATGGGAATGAGAAAACGAGAAAATGAAGGCAGAGCTTTCTAGACTTCATTCCCATACAGAGTATGGGAATGAGAAA

>NZ_CP011456|20|20|2752792-2752885|CRISPRCasFinder
TTCATTCCCATACAGAGTATGGGAATGAGAAA	ACGAGAAAATGAAGGCAGAGCTTTCTAGAC
TTCATTCCCATACAGAGTATGGGAATGAGAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011456.1\|WP_053539177.1\|2750307_2750517_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053539171.1\|2743229_2743538_+\|HigA-family-addiction-module-antidote-protein	unknown	unknown	gnl\|CDD\|274228
NZ_CP011456.1\|WP_081424363.1\|2759566_2761018_+\|precorrin-3B-synthase	unknown	unknown	gnl\|CDD\|236573
NZ_CP011456.1\|WP_053539173.1\|2744304_2744616_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053539174.1\|2745263_2746985_+\|precorrin-3B-C(17)-methyltransferase	unknown	unknown	gnl\|CDD\|381173
NZ_CP011456.1\|WP_053539176.1\|2749532_2750129_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP011456.1\|WP_053539182.1\|2756886_2757810_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|368438
NZ_CP011456.1\|WP_053539181.1\|2755959_2756775_-\|sulfurtransferase	unknown	unknown	gnl\|CDD\|225450
NZ_CP011456.1\|WP_081424362.1\|2744080_2744248_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|369567
NZ_CP011456.1\|WP_053541268.1\|2751014_2751521_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053539183.1\|2757879_2759235_+\|bifunctional-UDP-N-acetylglucosamine-diphosphorylase/glucosamine-1-phosphate-N-acetyltransferase-GlmU	unknown	unknown	gnl\|CDD\|184646
NZ_CP011456.1\|WP_053539180.1\|2754406_2755786_-\|glutathione-disulfide-reductase	unknown	unknown	gnl\|CDD\|235701
NZ_CP011456.1\|WP_053539187.1\|2763082_2763340_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053541269.1\|2754111_2754324_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053539170.1\|2742500_2743052_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_039202415.1\|2761025_2761652_+\|precorrin-8X-methylmutase	unknown	unknown	gnl\|CDD\|181352
NZ_CP011456.1\|WP_053539178.1\|2751541_2752675_-\|histidinol-phosphate-transaminase	unknown	unknown	gnl\|CDD\|235053
NZ_CP011456.1\|WP_081424212.1\|2747595_2748777_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|369339
NZ_CP011456.1\|WP_053539186.1\|2762441_2763062_-\|(2Fe-2S)-ferredoxin-domain-containing-protein	unknown	unknown	gnl\|CDD\|239278
NZ_CP011456.1\|WP_053539185.1\|2761651_2762359_+\|precorrin-2-C(20)-methyltransferase	unknown	unknown	gnl\|CDD\|180341

Protein	Function_ID	Function_description	E-value
NZ_CP011456.1\|WP_053539171.1\|2743229_2743538_+\|HigA-family-addiction-module-antidote-protein	gnl\|CDD\|274228	TIGR02607, Virulence-associated_protein_I, addiction module antidote protein, HigA family. Members of this family form a distinct clade within the larger family HTH_3 of helix-turn-helix proteins, described by pfam01381. Members of this clade are strictly bacterial and nearly always shorter than 110 amino acids. This family includes the characterized member HigA, without which the killer protein HigB cannot be cloned. The hig (host inhibition of growth) system is noted to be unusual in that killer protein is uncoded by the upstream member of the gene pair. [Regulatory functions, DNA interactions, Regulatory functions, Protein interactions, Mobile and extrachromosomal element functions, Other].	2.57894e-22
NZ_CP011456.1\|WP_053539186.1\|2762441_2763062_-\|(2Fe-2S)-ferredoxin-domain-containing-protein	gnl\|CDD\|239278	cd02980, TRX_Fd_family, Thioredoxin (TRX)-like [2Fe-2S] Ferredoxin (Fd) family; composed of [2Fe-2S] Fds with a TRX fold (TRX-like Fds) and proteins containing domains similar to TRX-like Fd including formate dehydrogenases, NAD-reducing hydrogenases and the subunit E of NADH:ubiquinone oxidoreductase (NuoE). TRX-like Fds are soluble low-potential electron carriers containing a single [2Fe-2S] cluster. The exact role of TRX-like Fd is still unclear. It has been suggested that it may be involved in nitrogen fixation. Its homologous domains in large redox enzymes (such as Nuo and hydrogenases) function as electron carriers.	2.40163e-19
NZ_CP011456.1\|WP_053539176.1\|2749532_2750129_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	5.55217e-15
NZ_CP011456.1\|WP_053539181.1\|2755959_2756775_-\|sulfurtransferase	gnl\|CDD\|225450	COG2897, SseA, Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism].	5.92981e-101
NZ_CP011456.1\|WP_081424363.1\|2759566_2761018_+\|precorrin-3B-synthase	gnl\|CDD\|236573	PRK09567, nirA, NirA family protein.	3.91258e-145
NZ_CP011456.1\|WP_081424362.1\|2744080_2744248_+\|hypothetical-protein	gnl\|CDD\|369567	pfam07878, RHH_5, CopG-like RHH_1 or ribbon-helix-helix domain, RHH_5. This family contains bacterial proteins that form a ribbon-helix-helix fold. This fold occurs in many examples of bacterial antitoxins.	0.00125859
NZ_CP011456.1\|WP_053539183.1\|2757879_2759235_+\|bifunctional-UDP-N-acetylglucosamine-diphosphorylase/glucosamine-1-phosphate-N-acetyltransferase-GlmU	gnl\|CDD\|184646	PRK14360, glmU, bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU.	0
NZ_CP011456.1\|WP_053539182.1\|2756886_2757810_+\|hypothetical-protein	gnl\|CDD\|368438	pfam05430, Methyltransf_30, S-adenosyl-L-methionine-dependent methyltransferase. This family is a S-adenosyl-L-methionine (SAM)-dependent methyltransferase. It is often found in association with pfam01266, where it is responsible for catalyzing the transfer of a methyl group from S-adenosyl-L-methionine to 5-aminomethyl-2-thiouridine to form 5-methylaminomethyl-2-thiouridine.	4.42473e-40
NZ_CP011456.1\|WP_053539180.1\|2754406_2755786_-\|glutathione-disulfide-reductase	gnl\|CDD\|235701	PRK06116, PRK06116, glutathione reductase; Validated.	0
NZ_CP011456.1\|WP_053539174.1\|2745263_2746985_+\|precorrin-3B-C(17)-methyltransferase	gnl\|CDD\|381173	cd11646, Precorrin_3B_C17_MT, Precorrin-3B C(17)-methyltransferase (also named CobJ or CbiH). Precorrin-3B C(17)-methyltransferase participates in the pathway toward the biosynthesis of cobalamin (vitamin B12). There are two distinct cobalamin biosynthetic pathways. The aerobic pathway requires oxygen, and cobalt is inserted late in the pathway; the anaerobic pathway does not require oxygen, and cobalt insertion is the first committed step towards cobalamin synthesis. This model includes CobJ of the aerobic pathway and CbiH of the anaerobic pathway, both as stand-alone enzymes and when CobJ or CbiH form part of bifunctional enzymes, such as in Mycobacterium tuberculosis CobIJ where CobJ fuses with a precorrin-2 C(20)-methyltransferase domain, or Bacillus megaterium CbiH60, where CbiH is fused to a nitrite and sulfite reductase-like domain. In the aerobic pathway, once CobG has generated precorrin-3b, CobJ catalyzes the methylation of precorrin-3b at C-17 to form precorrin-4 (the extruded methylated C-20 fragment is left attached as an acyl group at C-1). In the corresponding anaerobic pathway, CbiH carries out this ring contraction, using cobalt-precorrin-3b as a substrate to generate a tetramethylated delta-lactone.	3.28305e-130
NZ_CP011456.1\|WP_039202415.1\|2761025_2761652_+\|precorrin-8X-methylmutase	gnl\|CDD\|181352	PRK08285, cobH, precorrin-8X methylmutase; Reviewed.	9.58111e-135
NZ_CP011456.1\|WP_053539178.1\|2751541_2752675_-\|histidinol-phosphate-transaminase	gnl\|CDD\|235053	PRK02610, PRK02610, histidinol-phosphate transaminase.	0
NZ_CP011456.1\|WP_081424212.1\|2747595_2748777_-\|hypothetical-protein	gnl\|CDD\|369339	pfam07382, HC2, Histone H1-like nucleoprotein HC2. This family contains the bacterial histone H1-like nucleoprotein HC2 (approximately 200 residues long), which seems to be found mostly in Chlamydia. HC2 functions in DNA condensation, although it has been suggested that it also has other roles.	0.000153901
NZ_CP011456.1\|WP_053539185.1\|2761651_2762359_+\|precorrin-2-C(20)-methyltransferase	gnl\|CDD\|180341	PRK05990, PRK05990, precorrin-2 C(20)-methyltransferase; Reviewed.	5.84618e-99

>NZ_CP011456.1|WP_053539178.1|2751541_2752675_-|histidinol-phosphate-transaminase
MLKFIRSDLSQLNAYKAHPGSDSAEPVAIQFDRLDTNESPLDLPPEIKEKLAWTYQQIIETNRYPDGGHETLKNAISQYVNESANLENSTFTAANISVGNGSDELIRSLLIATCLGGEGSILVANPTFSMYGILAQTLGIPVVTVGRNHSNFETDLTAAKSAISQTQNPPIRVVFVVHPNSPTANSLTAAELEWLKSLPEEILVVIDEAYFEFSQTTLAGELLQRPNWVILRTFSKAFRLAAMRVGYCIAHPEAIAILEKVRLPYNLPSFSIAAALMALENRQLLLESIPQTLSERTKMITALSAHPTLEITPSSTNFIYLRIKTDDSQLSTTVLTNLNQKLRNQGTLIRLLPNGLRITIGTPAENTRTLERIQALL
>NZ_CP011456.1|WP_053541268.1|2751014_2751521_+|hypothetical-protein
MSNYHIQNSVINQIIMPDGNGQFNGSNLLTLIHGGKVFMVNSRRRNGLILFKEYHAEFAGPGAAIGGDHDSDCQGILPIGNLSLLTPESHEHRQKAYLLRRQWIRLIKQITESPIAKERVQKILDQFEVFFPSEIVACIPDEAFAMLVGVLTQTVTIVRRVGIDTKNK
>NZ_CP011456.1|WP_053539177.1|2750307_2750517_-|hypothetical-protein
MANATLRYQEVGAHGLRPFRSMANATLRYQEVGAQGLRPFGSMANATLRYQEDLEEVISNIKSGKLSDF
>NZ_CP011456.1|WP_053539176.1|2749532_2750129_+|GNAT-family-N-acetyltransferase
MKSWFFNPTQPPVNRETATLTIGKLQIRVATPDDLISIAQIVAESFHSQEGLWSWAFPLFRIGIYEDLRHRINSPTPHHICLVAVDTATENQKIMGTIEMSVRGNYPWIGVNPGFPYISNLAVDPGCRRLGVGSSLLIRCEQISQEWGFQDLYLHVLEHNHHARQLYFKLAYRVHKVESPWDALFLNRSREILLHKRI
>NZ_CP011456.1|WP_081424212.1|2747595_2748777_-|hypothetical-protein
MMPTLINNHLSDSSITSQPLRRHSDPPWLWTVVCIGSVSIHLLVFWLMRSSNEFQAWFPRSNQSSIPIDIIEIASEPKSTIKHQSTTPKIKPQSSFSSSPKSPPTTPNNQNDGEIISKIHLTEQDKTQKPEVRKIEVRKIEVKKPEVRKIEVKKPEVRKIEVEKPEVRKIEVEKPEPEKTEVEKSRVRQQFYPTNPIPEATPEATPIIPDSELPWNRRQEVKLGKGTLLRQDIPTDSPTPTAEPSVNPNREPEASPTTNGGGAIATVSPLLKEEVSELIQQKQLITDALPDVLAEYKGSTEKDLEASILPSDEDLKPANILASLVIDKNGKFQQAIIITIEPAALRSQANIYEQALNQIFAQESFLAAYNQDGSKPDLSNLYIRLKIKSINSP
>NZ_CP011456.1|WP_053539174.1|2745263_2746985_+|precorrin-3B-C(17)-methyltransferase
MNIRVCPAVVVLSQNSVTVGRRITSVLAGAKLYGLVNRTHDVDISFTNFGETLRELFAAGTPIIGICAAGILIRTIAPLLTDKGQEPPVLAVAEDGSAVVPLLGGLSGVNDLARQVGSALNIQPAITTTGDIRFHTALLSPPAGYHLANPEHGKKFIADLLAGGKVKLQGIAPWLSESNLPIDENGELIIQITENLGNSDPNCLVYHPGKIAIALLAEGNALTKPEPDTITQIHQILAESNLAPAAVAGIFAPLQLANNSQLHSIATTLGVPTRFLPTNELTELVLAATGADSRIVSSPFSQIAVAISTQIINPDTIGQPQGKLAIIGTGPGASQWMSPQVKEILAAATDLVGYKTYINLIGHLADGKRVHESDNRVEAERAYQALDLAASGKYVAVVSSGDPGIYAMAAAVFEVLEQYHKPEWQTIDIQVAPGISAMQAAAATIGAPLGHDFCVISLSDILKPWEIIAQRITAAAKSDFVIAFYNPVSKERTWQLAAAKKILMEHRKPDTPVVLGRNLGRKGEEVQVTTLKELEPALADMRTVIIIGSSHTRQIQQDHNIWVYTSRRYNSQE
>NZ_CP011456.1|WP_053539173.1|2744304_2744616_+|hypothetical-protein
MNTPPVDRLDRIEAILERVAVQQETTAVNLTELIYKVDDFMGTATSVLGRNAILNDVVVGLNETVGRLDTNLATLQSNFAENQKSTNAALERLEAILIKLMDS
>NZ_CP011456.1|WP_081424362.1|2744080_2744248_+|hypothetical-protein
MGQTKKAKITFTCSYELREELESIASSEDRTLSNLVERLVTRAVQIYKPEDQKAS
>NZ_CP011456.1|WP_053539171.1|2743229_2743538_+|HigA-family-addiction-module-antidote-protein
MENNLLHNPHAGEILKYEFLEELDISENTLAVNLGLTYPTIQGIITGKLKMTADIDLRLCRYFRLSDGYFLRLQNAYEIMEAKRNLGEILNQIIPYSLMVTD
>NZ_CP011456.1|WP_053539170.1|2742500_2743052_+|hypothetical-protein
MTSSYIVLEGNKNQEILEKLLPKNLIQDVKIVVGESQYEVRSLASSLIATRHIPVILILDANTDNESQVFEKRDLVNYLLRRAAAKTPFQVSLAIPEIEIIFLQNKPLIEKIAQREFNDLEWQLAQSKPKEFLETVLGKEQSISEKIFSNINDEEIKILQQHSLIQEIIEFLSSLIPSFVAIN
>NZ_CP011456.1|WP_053541269.1|2754111_2754324_+|hypothetical-protein
MIIPNFISMTKTELRAYIIAHPNDKAAFHTFIDRFASETPSEIFDIPKSNHELQQVENLIKEKLAETKYQ
>NZ_CP011456.1|WP_053539180.1|2754406_2755786_-|glutathione-disulfide-reductase
MTFDYDLFVIGAGSGGLAASKRAASYGAKVAIAEYDLVGGTCVIRGCVPKKLMVYGSHFPAQFQEAAGYGWTVGDVKFDWEHFITSIDKEVNRLSALHISFLEKAGVELISGRATFIDPHTVEVNGKQYTAAKILIAVGGRPVKPEIPGIEHAITSNEIFHLKTQPKHIAIIGSGYIGSEFACIMRGLGSEVTQIIRKEQILNGFDQDICTSIQEGMSNHGIRIVANTEVTAIEKVDAGLKLTLSGDNQEPIIADVFLIATGRSPNIEGLGLENAQLDCVPSSEEEPGYSTSNAIAVNEYSQTCQPHIYAVGDVTDRLNLTPVAIGEGRAFADTEFGNNRREFSHETVATAVFTTPEAATVGLTEAQARDKFGDDNIKIYRTSFRPMYYTLAGKQEKTMMKLIVDTSTDKILGAHMVGDSAAEIIQGVAIAVKMGATKADFDATVGIHPSAAEEFVTMR
>NZ_CP011456.1|WP_053539181.1|2755959_2756775_-|sulfurtransferase
MNNQFIVSPEWLFENLNNSQVVIVDCRFSLADSQLGKQQYQTNHIPGSYYLDLNQDLSSPVQEHGGRHPLPNITELAEKLSAIGVNSQKTLVVAYDDSRLAFASRLWWLLRYLGHEQVAVLDGGFDRWQKAGYAITDVIPTAERGTFIPQLQADKVVDFTYVKNHQDSQSVVLIDSREGERYRGEKEPIDKIAGHIPGAVNYPWQEVTDASGCVIPQLEQSQRWQNIDTNKEILVYCGSGVTACVNLLSLAIAGIPTAKLYAGSWSDWISY
>NZ_CP011456.1|WP_053539182.1|2756886_2757810_+|hypothetical-protein
MFTPQQTQDGSFTFFSTEFNEAFHSHYGAKQESLLKFAIPTRLPILAETGFVRLLDICYGLGYNTAAALQTIWQVNPRCHVELIGLELNPIVPQAAINHQLFNGWDDKYIKILTQIAFEHQIHIDYLQATLLIGDARNLILQVHESGFQADAIFLDPFSPPQCPQLWTLEFIQKVSECLQENGLLATYSCAAAVRTALLAAGLVVSSTPPIGRRTPGTIAGHPQHEEESTISYLPPLSQTEAEHLLTRAAIPYRDPNLSDTAAMILNRRQEEIQVSTLESSSQWRKRWLRSSTPQEILPEQSTVSND
>NZ_CP011456.1|WP_053539183.1|2757879_2759235_+|bifunctional-UDP-N-acetylglucosamine-diphosphorylase/glucosamine-1-phosphate-N-acetyltransferase-GlmU
MVVVAILAAGKGTRMKSNLPKVLHCLGGRSLVERVIESAEPLSPARKLVIVGYQSTEVKTAMDSIYGVEFVEQAVQLGTGHAIQQLLPHLEGYTGDLLILNGDVPLLRTETLKNLLQTHQENQNSCTILTAQLANPQGYGRVFRNSEGIVQKIVEDKDCTPNQRENDRVNAGIYCFHWPDLAKILPDLQANNSQKEYYLTDAVTQVGKVMAVDVKDNQEILGINDRLQLATANDILQKRIKEKWLLAGVTLIDPASITIDETVELQPDVILEPQTHLRGRTVIQAGSRIGPGSLIENSELGENVTVLYSVITDSVIQSQTRIGPYAHLRGHAEVGVGCRIGNFVELKNAQLGDRTNVAHLSYLGDTTTGTQVNVGAGTITANYDGVKKHRTTIGDRSKIGSNTVLVAPITVGNDVYIAAGSTVTEDVPDDSLVIARSRQVVKPDWKMKTDS
>NZ_CP011456.1|WP_081424363.1|2759566_2761018_+|precorrin-3B-synthase
MQIPFTACPGLFYNTAAQDGLLYRLRIPGGIINYNQFQAIADIADNYGSGYIDITNRANIQIREIKNSINVEVLKKLQALGLASTNAKIDHIRNIMTNPTAGIDGEELLDTRPLVKAWEKYITAHSQLSELSAKFSVCFDGGGKVAVKYQPNDIILAAEIINRNVYLRLYLSYGEKGQPAQDTGILFKPEETTTALAALAQTYLKHIDTRNRRKLRLREIINKITVKEYLHQIQENLNSDILNFTKTPLCASAPLREKTHIGIYPQRQTGLYYIGIVLPLGRLETSQIRGLANIAKRYGDDNIRLTPWQNLLLTDIPQNQISEVDQQIANLGLNSSPTNIKSFLVACSGKKGCAAAATETKDDAINLAKYLENLMILDSPVNIHFSGCSKSCAQHTQADITLLGIITETAKATFPAYQVYVLGHLLYEYVTIAKIPILIQEMLAVYQKQRLSLHETFGQFIDRHSHQLNQLFSQTTPNLTFTT
>NZ_CP011456.1|WP_039202415.1|2761025_2761652_+|precorrin-8X-methylmutase
MFDYIRDGSEIYRNSFEIIRSESNLERFPEDVAKVAVRMIHACGMTDIVKDLEYSSTAVASGKKALIAGAPILCDSYMVAEGVTKKRLPKNNKVLCTLNDPEVPQLAKRLRNTRSAAALEFWRFHIEGAIVVIGNAPTALFRLLEMLDEGVPRPALILGFPVGFVGAAESKAALAADSRNVPFLTLHGRRGGSAIAAAAVNALASEEE
>NZ_CP011456.1|WP_053539185.1|2761651_2762359_+|precorrin-2-C(20)-methyltransferase
MTNPGGRLYGIGVGPGDPELITLKALRLLRSAPVIAYQSATNKESIARKIVSPYLDHSQIEVAFHLPRALEPEKAKSIYDQETQPIADHLAAGRDVVVICEGDPFFYGSFMYLFTRLADKYKTEVVPGVSSLMACPVALGLPFTYYNDVLTVLPAPLPREALISQLLATDAAAIMKLGRHFLKVRDILHELGLASRARYIERATTTQQRILPLDEVDPLDVPYFSMIIIPTKNKL
>NZ_CP011456.1|WP_053539186.1|2762441_2763062_-|(2Fe-2S)-ferredoxin-domain-containing-protein
MNISTNSAVTEFCFEGRFLDFVIKDGYKLRGLLLGTSEGEFYIKLAKHLRSAFDLRLAKGTWLQVVGTKQYNPKKDQVTLVAERVMAASSDMGIVAAQNQIKTKPAKTQTILVCQKSDCMKRGGKALCQALESELINSGLENSVTIKGTGCMKNCKSGPNLVMPDKTRYSKIQAVQVPALIDKHFSDKSQDKAKNMPENIHTLVKV
>NZ_CP011456.1|WP_053539187.1|2763082_2763340_-|hypothetical-protein
MKSFSSDTDRKHVIDINWADRWQVYQRLQELDIICVCQTNQPLTVEINNPAAAIQLWSVIQQFTASRQDLIGNLENCWRCRYQKF

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Crispr_ID: NZ_CP011456_21

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011456_21

2784578-2784662

Orphan

Consensus_repeat	Method
ATGTCCAGGATTAAAGGATGAACA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP011456_21

>merge|NZ_CP011456|21|2784578-2784662|CRISPRCasFinder
ATATCCAGGATTAAAGGATGAACATTGTCAGAAATGGCTAACGCCACGCTACGCGAACAGGATGTCCAGGATTAAAGGATGAACA

>NZ_CP011456|21|21|2784578-2784662|CRISPRCasFinder
ATATCCAGGATTAAAGGATGAACA	TTGTCAGAAATGGCTAACGCCACGCTACGCGAACAGG
ATGTCCAGGATTAAAGGATGAACA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011456.1\|WP_039202423.1\|2777110_2777431_+\|glutaredoxin-3	unknown	unknown	gnl\|CDD\|274017
NZ_CP011456.1\|WP_081424213.1\|2778140_2778932_+\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	unknown	unknown	gnl\|CDD\|153251
NZ_CP011456.1\|WP_027404948.1\|2777548_2778028_+\|tRNA-adenosine(34)-deaminase-TadA	unknown	unknown	gnl\|CDD\|223663
NZ_CP011456.1\|WP_027404938.1\|2787870_2788338_-\|DUF29-domain-containing-protein	unknown	unknown	gnl\|CDD\|366774
NZ_CP011456.1\|WP_053539200.1\|2783474_2784476_-\|CHAD-domain-containing-protein	unknown	unknown	gnl\|CDD\|227894
NZ_CP011456.1\|WP_053541271.1\|2782053_2782611_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|341491
NZ_CP011456.1\|WP_039204811.1\|2788427_2789189_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213222
NZ_CP011456.1\|WP_027404943.1\|2784741_2785146_-\|4Fe-4S-dicluster-domain-containing-protein	unknown	unknown	gnl\|CDD\|197998
NZ_CP011456.1\|WP_053539201.1\|2785206_2785773_+\|thioredoxin-fold-domain-containing-protein	unknown	unknown	gnl\|CDD\|239248
NZ_CP011456.1\|WP_053539196.1\|2775745_2776849_-\|amino-acid-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270410
NZ_CP011456.1\|WP_053539204.1\|2790179_2791802_+\|radical-SAM-protein	unknown	unknown	gnl\|CDD\|188475
NZ_CP011456.1\|WP_053539199.1\|2782607_2783381_+\|DNA-binding-protein	unknown	unknown	gnl\|CDD\|370129
NZ_CP011456.1\|WP_053539206.1\|2793697_2794498_+\|PhzF-family-phenazine-biosynthesis-protein	unknown	unknown	gnl\|CDD\|223461
NZ_CP011456.1\|WP_027404936.1\|2789908_2790163_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226580
NZ_CP011456.1\|WP_053539203.1\|2786566_2787802_+\|LL-diaminopimelate-aminotransferase	unknown	unknown	gnl\|CDD\|181053
NZ_CP011456.1\|WP_053541270.1\|2773557_2774703_-\|amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223836
NZ_CP011456.1\|WP_053539202.1\|2786072_2786447_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376187
NZ_CP011456.1\|WP_053539198.1\|2779200_2781309_-\|S8-family-serine-peptidase	unknown	unknown	gnl\|CDD\|173822
NZ_CP011456.1\|WP_053539205.1\|2791801_2792626_+\|DUF2887-domain-containing-protein	unknown	unknown	gnl\|CDD\|371375
NZ_CP011456.1\|WP_053539195.1\|2774780_2775707_-\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|226960

Protein	Function_ID	Function_description	E-value
NZ_CP011456.1\|WP_039202423.1\|2777110_2777431_+\|glutaredoxin-3	gnl\|CDD\|274017	TIGR02181, GRX_bact, Glutaredoxin, GrxC family. Glutaredoxins are thioltransferases (disulfide reductases) which utilize glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system. Glutaredoxins utilize the CXXC motif common to thioredoxins and are involved in multiple cellular processes including protection from redox stress, reduction of critical enzymes such as ribonucleotide reductase and the generation of reduced sulfur for iron sulfur cluster formation. Glutaredoxins are capable of reduction of mixed disulfides of glutathione as well as the formation of glutathione mixed disulfides. This family of glutaredoxins includes the E. coli protein GrxC (Grx3) which appears to have a secondary role in reducing ribonucleotide reductase (in the absence of GrxA) possibly indicating a role in the reduction of other protein disulfides. [Energy metabolism, Electron transport].	4.06998e-43
NZ_CP011456.1\|WP_081424213.1\|2778140_2778932_+\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	gnl\|CDD\|153251	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), Tafazzin (product of Barth syndrome gene), and similar proteins.	4.04756e-34
NZ_CP011456.1\|WP_027404948.1\|2777548_2778028_+\|tRNA-adenosine(34)-deaminase-TadA	gnl\|CDD\|223663	COG0590, CumB, Cytosine/adenosine deaminases [Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis].	1.94143e-69
NZ_CP011456.1\|WP_027404938.1\|2787870_2788338_-\|DUF29-domain-containing-protein	gnl\|CDD\|366774	pfam01724, DUF29, Domain of unknown function DUF29. This family consists of various hypothetical proteins from cyanobacteria, none of which are functionally described. The aligned region is approximately 120-140 amino acids long corresponding to almost the entire length of the proteins in the family. Structure 3fcn is a small protein that has a novel all-alpha fold. The N-terminal helical hairpin is likely to function as a dimerization module. This protein is a member of PFam family PF01724. The function of this protein is unknown. One protein sequence contains a fusion of this protein and a DnaB domain, suggesting a possible role in DNA helicase activity (hypothetical). Dali hits have low Z and high rmsd, suggesting probably only topological similarities (not functional relevance) (details derived from TOPSAN). The family has several highly conserved sequence motifs, including YD/ExD, DxxNVxEEIE, and CPY/F/W, as well as conserved tryptophans.	6.58211e-58
NZ_CP011456.1\|WP_053539200.1\|2783474_2784476_-\|CHAD-domain-containing-protein	gnl\|CDD\|227894	COG5607, COG5607, Uncharacterized conserved protein [Function unknown].	3.17773e-66
NZ_CP011456.1\|WP_053541271.1\|2782053_2782611_+\|hypothetical-protein	gnl\|CDD\|341491	cd17792, CtkA, serine/threonine-protein kinase CtkA and similar proteins. The Helicobacter pylori serine/threonine-protein kinase CtkA (proinflammatory kinase), encoded by the jhp940 gene, has been shown to be secreted by the bacterium and to induce cytokines in gastric epithelial cells. It may play a role in chronic gastric inflammation. CtkA autophosphorylates itself at a threonine residue near the N-terminus and it translocates into cultured human cells. It also enhances phosphorylation of the NF-kappaB p65 subunit at Ser276 in human epithelial cancer cells; phosphorylation at this position is known to activate the transcriptional activity of NF-kappaB.	3.38295e-12
NZ_CP011456.1\|WP_039204811.1\|2788427_2789189_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213222	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.	1.9139e-115
NZ_CP011456.1\|WP_027404943.1\|2784741_2785146_-\|4Fe-4S-dicluster-domain-containing-protein	gnl\|CDD\|197998	smart00930, NIL, This domain is found at the C-terminus of ABC transporter proteins involved in D-methionine transport as well as a number of ferredoxin-like proteins. This domain is likely to act as a substrate binding domain. The domain has been named after a conserved sequence in some members of the family.	5.60682e-21
NZ_CP011456.1\|WP_053539201.1\|2785206_2785773_+\|thioredoxin-fold-domain-containing-protein	gnl\|CDD\|239248	cd02950, TxlA, TRX-like protein A (TxlA) family; TxlA was originally isolated from the cyanobacterium Synechococcus. It is found only in oxygenic photosynthetic organisms. TRX is a small enzyme that participate in redox reactions, via the reversible oxidation of an active site dithiol present in a CXXC motif. Disruption of the txlA gene suggests that the protein is involved in the redox regulation of the structure and function of photosynthetic apparatus. The plant homolog (designated as HCF164) is localized in the chloroplast and is involved in the assembly of the cytochrome b6f complex, which takes a central position in photosynthetic electron transport.	1.11735e-79
NZ_CP011456.1\|WP_053539196.1\|2775745_2776849_-\|amino-acid-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270410	cd13692, PBP2_BztA, Substrate bindng domain of ABC glutamate/glutamine/aspartate/asparagine transporter; the type 2 periplasmic binding protein fold. BztA is the periplamic-binding protein component of ABC transporter specific for carboxylic amino acids, glutamine and asparagine. The BZtA domain belongs to the type 2 periplasmic binding protein fold superfamily (PBP2), whose many members are involved in chemotaxis and uptake of nutrients and other small molecules from the extracellular space as a primary receptor. The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two receptor cytoplasmically-located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	2.60259e-129
NZ_CP011456.1\|WP_053539204.1\|2790179_2791802_+\|radical-SAM-protein	gnl\|CDD\|188475	TIGR03960, radical_SAM_domain_protein, radical SAM family uncharacterized protein. This model describes a radical SAM protein, or protein region, regularly found paired with or fused to a region described by TIGR03936. PSI-BLAST analysis of TIGR03936 suggests a relationship to the tRNA pseudouridine synthase TruA, suggesting that this system may act in RNA modification. [Unknown function, Enzymes of unknown specificity].	1.19836e-92
NZ_CP011456.1\|WP_053539199.1\|2782607_2783381_+\|DNA-binding-protein	gnl\|CDD\|370129	pfam08797, HIRAN, HIRAN domain. The HIRAN domain (HIP116, Rad5p N-terminal) is found in the N-terminal regions of the SWI2/SNF2 proteins typified by HIP116 and Rad5p. The HIRAN domain is found as a standalone protein in several bacteria and prophages, or fused to other catalytic domains, such as a nuclease of the restriction endonuclease fold and TDP1-like DNA phosphoesterases, in the eukaryotes. It has been predicted that this domain functions as a DNA-binding domain that probably recognizes features associated with damaged DNA or stalled replication forks.	9.68339e-05
NZ_CP011456.1\|WP_053539206.1\|2793697_2794498_+\|PhzF-family-phenazine-biosynthesis-protein	gnl\|CDD\|223461	COG0384, COG0384, Predicted epimerase, PhzC/PhzF homolog [General function prediction only].	4.61893e-90
NZ_CP011456.1\|WP_027404936.1\|2789908_2790163_+\|hypothetical-protein	gnl\|CDD\|226580	COG4095, COG4095, Uncharacterized conserved protein [Function unknown].	1.47942e-18
NZ_CP011456.1\|WP_053539203.1\|2786566_2787802_+\|LL-diaminopimelate-aminotransferase	gnl\|CDD\|181053	PRK07590, PRK07590, L,L-diaminopimelate aminotransferase; Validated.	0
NZ_CP011456.1\|WP_053541270.1\|2773557_2774703_-\|amino-acid-ABC-transporter-permease	gnl\|CDD\|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	1.41547e-62
NZ_CP011456.1\|WP_053539202.1\|2786072_2786447_-\|hypothetical-protein	gnl\|CDD\|376187	pfam18765, Polbeta, Polymerase beta, Nucleotidyltransferase. A member of the nucleotidyltransferase fold found in polymorphic toxins (NTox45) and polyvalent proteins.	3.05483e-07
NZ_CP011456.1\|WP_053539198.1\|2779200_2781309_-\|S8-family-serine-peptidase	gnl\|CDD\|173822	cd07498, Peptidases_S8_15, Peptidase S8 family domain, uncharacterized subfamily 15. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.	9.71975e-84
NZ_CP011456.1\|WP_053539205.1\|2791801_2792626_+\|DUF2887-domain-containing-protein	gnl\|CDD\|371375	pfam11103, DUF2887, Protein of unknown function (DUF2887). This bacterial family of proteins has no known function. These proteins may be distantly related to the PD(D/E)XK superfamily.	7.08704e-94
NZ_CP011456.1\|WP_053539195.1\|2774780_2775707_-\|ABC-transporter-permease-subunit	gnl\|CDD\|226960	COG4597, BatB, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	8.24488e-71

>NZ_CP011456.1|WP_053539200.1|2783474_2784476_-|CHAD-domain-containing-protein
MKIPSETSIKTLGETAHQAIENHLTKTIRWEKAVKRDEDPEPLHQMRVGMRRLRTAVSRFERYLFLPKSVSDKNIGKFARILGSLRDLDVLAEILEKNYKPHLLEKEQKSLETAFTELHKQREIAVSHVQNIFKDEVYKSFKNEAENWLKNPSYRSFSSVPIYHILPDLLSPEVSEFCLHPGWLIGTKIVKSEIVVQTKWTPNQLEEHLKTEGKTLHDLRKQAKRLRYQMELFTELYGESFTAHIHDIKNIQEILGMIQDNMVLHEWLENIFKSELDTQLRGLTTLLAANRYQLWQEWQPLQQRYLQADIRYNLHLVVLQPTLVNLKQALADS
>NZ_CP011456.1|WP_053539199.1|2782607_2783381_+|DNA-binding-protein
MKTPQTLFLAWQDTHSRSWFTIGRLTYDGTKYKFVYTQSVKEAQNTCGFEPLYSFPDLEKVYTSIHLFPIFSNRLMSRSRPDYANFLQWLNISELEDDPLAILARSGGQRETDSLAVFPCPEADEKGEYQLHFFAHGLRHLPKCAIERINHFVSTEKLWLAHEFQNPHDPKALTLNTEDHHIVGYCPRYLRSEVFDLIWKDPSSVRLEVERVNLPPTPLQFRLLCHITTLCKDDFRPFSSPEYQPLVIDNIITASGY
>NZ_CP011456.1|WP_053541271.1|2782053_2782611_+|hypothetical-protein
MDIVLKVLEADHINLPIGWTAPSGIQKAVEVFVGYLMLDAWIGNGDRHHHNWGLVRSKLTPNITETIHLAPTYDHASSLGRELYDEKRQKCSVDSYINKCKSAFYSSAEDKKPLKTLDVFYRSALRYPQSAMIWLEHLERISKADTLLILNRIPQKRISNIAVEFAQKILELNQNRLLNLKELLE
>NZ_CP011456.1|WP_053539198.1|2779200_2781309_-|S8-family-serine-peptidase
MSDNINPANFPESDVANNSQSLTLQRGGEELMLEKTLYRFTIRPNVNFPHEKLTQIPGSVWRRSIPQAKLELYTVFPNQLDAVMSQLRADENVDFVSHVYTLENNPGTFVYLSDQITIQFATWVDNTKINTITSTLNLVQDQPVVGIPNTFVFLVSKQSTQNPVKITNYLQTLPEVLAAEPNILIQQEPHYKPKDSLYSQQWYLNHNSSNQLVAGSHISVEQAWDTTRGVRSIVVAVVDDSFDLKHPDFQGTGKIIAPRDLKENDFLPLPGEKETSHGTACAGLAVAEENGSGIVGVAPGCAMMPIRTTGFLDDQSIEDIFDWAVEKGASVISCSWGASAVYFPLSIRQKAAINRAATNGRKGKGCVIVFAAGNANRPINGTVNEQNWPKNIVQGKTNWLSGFAVHPDVMTVSASTSLNKKAAYSNWGGNVSVCAPSNNAPPGMWFQETGFVYTQPAIVSSLFGLGVFTTDQIGAAGYDAGNFTKNFGGTSSSTPIVAGVAALVLSANPDLTAQQVKRILQDTADKIVDNNPDLQLGVSGGTYDSNGHSQWFGYGKVNAAKAVRLAQQMGVVAKITNKQIQVKNSQVVNIPDNNRQGIKSTIAINEAVNVTDIQVTVNITHDFLGDLEVYLIAPNNQRILLQSRTLGRRNQLQNTYTVRSHPALKQLLSLPAKGNWQLQVIDYATLDVGKLNNWELVIGFGK
>NZ_CP011456.1|WP_081424213.1|2778140_2778932_+|1-acyl-sn-glycerol-3-phosphate-acyltransferase
MIKSYFASTNRHSQTRNTPVNPHLDSPRQPSVLQNTSRVSPLLIRVAYFLGHYIVLPSFFGHIKVTGRENIPTSGPVILAPTHRSRWDSLVLPYATGRCVTGRDMRFMVTSNECQGLQGWFVLRMGGFPVNIERPAIATLRHTVELMQQGEMLVIYPEGGIHRDGQLHPLKPGIARLAVTAESTYPGLDIKVIPVGIHYSEPYPNWGTDVNIHIGEPIKAADYMNGNLKLEAKRLTADLTHKLKQLSHQEVKISDRIFIEIHN
>NZ_CP011456.1|WP_027404948.1|2777548_2778028_+|tRNA-adenosine(34)-deaminase-TadA
MLEHPEYLKHRKWMNHALELARVAGDAGEVPVGAVIVDMNNQLVAVGENRKERDQDPTAHAEIMAIRAASQVLQSWRLHQCTLYVTLEPCPMCAGAIVHARLGKLIYGVDDTKTGAIRTVINIPDHPASNHRVKVVGGILESECREQLQSWFVTQRQQK
>NZ_CP011456.1|WP_039202423.1|2777110_2777431_+|glutaredoxin-3
MLNFLNSLLGRHPEQIKANVEIYTWQTCPYCIRAKMLLSWKGVNFTEYKIDGDETARTIMAERADGRRSVPQIFINNQHIGGCDDLYQLDAKAQLDPLLFQVASNG
>NZ_CP011456.1|WP_053539196.1|2775745_2776849_-|amino-acid-ABC-transporter-substrate-binding-protein
MKFSKLSVILQGIGMPLAIAPLIIILSACNDQPQNNPNTQNPDSTPQGQVTRVLWNRIKSRGQLVCGVSGELPGFSFVGTDGKYSGIDVDICRAVAAAVFDNPDAVEYRNLNTKERFTALQTGEVDILSRNTSWTFSRATSQGLDFAPVVFYDGQAVMVRKNSNIKSIKDLKDKAICVQTGTTTEQNLADQMRKRGITYKPVVFEDVNITFATYAEGRCDAVTTDRSALVSRRTTLPKPEDNIILDDVLSSEPLAPAVAKGDTKWSDIVTWTVYALVKAEELGINSQNLAEFANSKDPDIKRFLGTEGNLGEGIGLTKDFAAKIIKHVGNYGEIYDRNLGAKTKLNLPRGQNQISTKGGLLYSPPFR
>NZ_CP011456.1|WP_053539195.1|2774780_2775707_-|ABC-transporter-permease-subunit
MTNSKPPFWRDNRFWQNAIQLIFVFLAVVIVFIFWGNVSRNLQQLGIQFGFNFLKQQASFDIGETLINYKPTDAYNYALLVGLVNSLRIAIMGIFLTTIVGITAGIARLSDNWLVRNITVIYVEVFRNTPLLLQLLFWYFAVFLSFPKAENKISFLGFANFSQNGIELPWFTLSPEFSSLLLGLTFYTGAFIAEIVRGGIQSVPTGQLEAAKSLGLNPGLAMRLVIFPQALRVIIPPLTSQYLNLTKNSSLAIAIGYPDIYFVASTTFNQTGKAVEVMLLIMITYLTLSLIISLTMNLFNRSVQIKER
>NZ_CP011456.1|WP_053541270.1|2773557_2774703_-|amino-acid-ABC-transporter-permease
MIKLSWLRKNLFNNWYNSLLTVVCFIFLFWLVQGFAIWLITKAQWQVIQVNLHLFLVGRFPQSLYWRIWVVLGISTTLTAITASAFTKKAIFTNRNSLIAVVMMGTLWFIFPIPLTSRLWLLLITGLIVVGLIIGQKSTKIITPWLSLTWLLSCPLIIWLIGGGLGLQPVSTNLWNGLLLTLLMAIISIVLSFPIGVFLALGRTSNLPVVRWFSILYIEIVRGLPLIGILFLAQVMLPLFLPADLRLDRLLRGTTGLILFSAAYMAENVRGGLQAIPRGQIEAGKALGLNTPLLLILVILPQALRAVIPAIVGQFIGLFKDTSLLSLVGLVELTGMARSILAQPQFLGRYAEVYLFIGLIYWVFCYSMSLAAKNLEKQLTS
>NZ_CP011456.1|WP_027404943.1|2784741_2785146_-|4Fe-4S-dicluster-domain-containing-protein
MKKRVTLTFPKRAIQMPVTYRLAKDFNVAANIIRAQVAPNQIGKLVVELLGDIDQLDAAIEWMRSQHIHVSLGLGEIVIDEDVCVHCGLCTGVCPTEALAINPETYKLTFVRSRCIVCEQCIPTCPVQAISTNL
>NZ_CP011456.1|WP_053539201.1|2785206_2785773_+|thioredoxin-fold-domain-containing-protein
MSTQAPVNSSNRIKNFLIAIVAIALGVALFLGLKTDSTSVSLAELGKTAIPLEVAVSNGKPSLVEFYADWCTVCQKMTPDMAKLREKYNNNLNFVMLNVDNTKWLPEMLKYRVDGIPHFVFLGKQGETIAETIGDIPRTIMASNLEALITGSTLPHIQGNGKTSQFSARVATDSNQDDPRSHGSQVVN
>NZ_CP011456.1|WP_053539202.1|2786072_2786447_-|hypothetical-protein
MSLINEATKQRIIQEVLEARKNRPQFLVAMQERQKQGLKIARQCAKILKERFGAEKVVLFGSLLDHQQMSWRSDIDLAVWGLPEKDYFKAWAAIDEGHTFEIDLVEVQNARPYIVKAIYQGIEL
>NZ_CP011456.1|WP_053539203.1|2786566_2787802_+|LL-diaminopimelate-aminotransferase
MATINDNYLKLKAGYLFPEIARRVNAFAQANPDAKIIRLGIGDVTEPLPEACRTAMIKAVEDMGDRSSFKGYGPEQGYAWLREKIATHDFQARGAAIEADEIFISDGSKCDSGNILDIFGKNNIIAVTDPVYPVYVDTNVMAGNTGDANEKGEYGGLVYLPVTAENNFTAEIPSQKVDLIYLCFPNNPTGATATKEHLQAWVNYAKANGSIIFFDAAYEAFITDPTLPHSIFEIEGARDCAIEFRSFSKNAGFTGTRCALTVVPKNLTAKAADGTNVELWKLWNRRQSTKFNGVSYIIQRGAEAVYSEAGQTQIKALVNFYLDNAKIIREELTNAGLNVYGGVNAPYVWVQTPHGLSSWEFFDKLLETVNVVGTPGSGFGAAGEGYFRISAFNSRENVEEAMKRITAKFKV
>NZ_CP011456.1|WP_027404938.1|2787870_2788338_-|DUF29-domain-containing-protein
MSNTLYDSDLQLWIEQTIQQLQNHEFESLDIQHLIEELVDLGKSEKNTLRSNLKILLAHLLKLKIQHDAPDSMKGSWYSSVVEHRQRVLDNLADTPSLKSFLVEAIEKAYPDARKLAIKEAKFAKFGVRIPEESEYPITFPFSIEQILNEDFYGL
>NZ_CP011456.1|WP_039204811.1|2788427_2789189_-|ABC-transporter-ATP-binding-protein
MDDTLTITNANIPHAPELAIIRLEDIFKIYGIGEIEVKALNNVNLVITQGEYCSIMGPSGSGKSTAMNIIGCLDRPSSGNYYLDNLNVAQMNDTELAHIRNRKLGFVFQQFHLLNQLTALENVMLPMVYAGVKPGERKDRATSALIKVGLEKRLNNKPTQLSGGQQQRVAIARAIVNNPVVLLADEPTGALDSHTTQEVLDLFSELNSSGITVVIVTHESEVARQTKRIVWFRDGEVVHSHLTPHELHEVVTS
>NZ_CP011456.1|WP_027404936.1|2789908_2790163_+|hypothetical-protein
MDFITILGLVAGALTTIAFLPQMFQIWRTKSAKDVSYVMLIVFMSGLFLWLVYGIILGALPVILANGVTLCFNLIILWLKIKYR
>NZ_CP011456.1|WP_053539204.1|2790179_2791802_+|radical-SAM-protein
MTSSVFDCERLLFTPATPKHDAIPVIFAFPNEYTVGITSLGYQVVWATLAMRDDLQVSRLFTDIREQLPRHPELLGFSMSWELDYVNIFNLLESLEIPIRADSRNQNYPLVFGGGPVLTANPEPYAEFFDVILLGDGENLLGDFIDTYKKVRNADRETQLKTLAQVPGIYIPSLYVIEYVTPDGEIKSINPISAEIPPIIQKQTYRGNTLSASTVVTEKAAWENIYMVEVVRSCPEMCRFCLASYLTLPFRTASLENSLIPGIERGLKVTSRLGLLGASVTQHPEFTELLDYIGQPKYDDVRLSVASVRTNTVTVKLAETLAKRDTRSLTIAVESGSEKVRKIVNKKLHNDEIIQAAINAKAGGLSSLKLYGMVGIPGEEAEDVDATVKMMEGIRKAAPGLRLTLGCSTFVPKSHTPFQWFGVNKQAEKRLQLLQKQIKPQGMEFRPESYNWSIIQALLSRGDRRLSPLLELTRDFGDSLGSYKRAFKQLKGQIPDLDFYVHSNWSTEQILPWNHLHGPLPQSTLIKHLAEATNLELNHK
>NZ_CP011456.1|WP_053539205.1|2791801_2792626_+|DUF2887-domain-containing-protein
MHTDTIFYQIFLTFHTLLFELLGQPTENAEGYQFTSVEVKEKAFRFDGIFMPDSEEKPIYFVEVQFQNKPEFYWELITEINIYLNQYKPEQDWQAVALFAKRSLDVEKLTNYQQELVNSGRIKRIYLDEIASGSIGMGLIELIVSKENQSQELVKNLMTRTKTEVSNDSERQGIIELLESVLMSKFSQLSRQEIEAMFLVSDIKQTRVYQEAKEEGEKNLLLRQLSKRFGKLGDAYIKSINSLTIAQLEDLGEALLDFGDINDLEQWLKSHTES
>NZ_CP011456.1|WP_053539206.1|2793697_2794498_+|PhzF-family-phenazine-biosynthesis-protein
MNQIITQVDAFTNTPFKGNPAAVCVLDSPQSEAWMQNIAQEMNLSETAFLVKQDDGFNLRWFTPTVEVPLCGHATLASAHVLWSQGHLLPNQEARFYTKSGILIAKLENDWIQLDFPVNLSQSAESPPELSQVLGVTCKSVVQNSLGYLVEVESEQLVREMQPNFQQMKTLTKADIIVTSIADSGSEYDFVSRFFAPMLGIDEDPVTGAAHCCLAPFWRDKLGKDEFLAYQASNRGGVVKMYYPGANRVFLSGQAVIVMQGQLTLG

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Crispr_ID: NZ_CP011456_22

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011456_22

2961651-2961781

Orphan

Consensus_repeat	Method
TCTATAAATTACCATCCTGTACATCCTTTAATCCTGGATATCCTGATTC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP011456_22

>merge|NZ_CP011456|22|2961651-2961781|CRISPRCasFinder
TCTATAAATTACCATCCTGTACATCCTTTAATCCTGGATATCCTGATTCAGACAAATGCAATTTTCATCACCAAACAAACCATCTATAAATTACCATCCTGTAAATCCTTTAATCCTGGATATCCTGATTC

>NZ_CP011456|22|22|2961651-2961781|CRISPRCasFinder
TCTATAAATTACCATCCTGTACATCCTTTAATCCTGGATATCCTGATTC	AGACAAATGCAATTTTCATCACCAAACAAACCA
TCTATAAATTACCATCCTGTAAATCCTTTAATCCTGGATATCCTGATTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011456.1\|WP_027403866.1\|2955036_2955264_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053539302.1\|2950428_2951403_-\|DUF362-domain-containing-protein	unknown	unknown	gnl\|CDD\|224917
NZ_CP011456.1\|WP_053539306.1\|2963543_2964806_+\|organoarsenical-effux-MFS-transporter-ArsJ	unknown	unknown	gnl\|CDD\|340883
NZ_CP011456.1\|WP_081424365.1\|2959209_2960643_-\|DUF697-domain-containing-protein	unknown	unknown	gnl\|CDD\|368297
NZ_CP011456.1\|WP_053539310.1\|2969886_2970093_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|177775
NZ_CP011456.1\|WP_053539305.1\|2954777_2955062_-\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl\|CDD\|224937
NZ_CP011456.1\|WP_053539303.1\|2951630_2952380_-\|M50-family-metallopeptidase	unknown	unknown	gnl\|CDD\|315961
NZ_CP011456.1\|WP_053539311.1\|2970724_2971270_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053539301.1\|2948959_2950012_-\|permease	unknown	unknown	gnl\|CDD\|223773
NZ_CP011456.1\|WP_053539307.1\|2965032_2966109_+\|ACR3-family-arsenite-efflux-transporter	unknown	unknown	gnl\|CDD\|213563
NZ_CP011456.1\|WP_053539308.1\|2966145_2966934_+\|Nif3-like-dinuclear-metal-center-hexameric-protein	unknown	unknown	gnl\|CDD\|376614
NZ_CP011456.1\|WP_053539300.1\|2948011_2948776_-\|TIGR03943-family-protein	unknown	unknown	gnl\|CDD\|274870
NZ_CP011456.1\|WP_027403870.1\|2957446_2958079_+\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|368559
NZ_CP011456.1\|WP_053541282.1\|2962415_2963432_+\|ArsJ-associated-glyceraldehyde-3-phosphate-dehydrogenase	unknown	unknown	gnl\|CDD\|169599
NZ_CP011456.1\|WP_053539304.1\|2952930_2954100_-\|formate-dependent-phosphoribosylglycinamide-formyltransferase	unknown	unknown	gnl\|CDD\|236454
NZ_CP011456.1\|WP_027403878.1\|2967682_2967994_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053541283.1\|2971739_2972159_-\|thioredoxin-family-protein	unknown	unknown	gnl\|CDD\|239245
NZ_CP011456.1\|WP_053539312.1\|2972885_2973482_-\|urease-accessory-protein-UreG	unknown	unknown	gnl\|CDD\|349776
NZ_CP011456.1\|WP_027403863.1\|2952473_2952770_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053539309.1\|2968132_2969785_-\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|224157

Protein	Function_ID	Function_description	E-value
NZ_CP011456.1\|WP_053539302.1\|2950428_2951403_-\|DUF362-domain-containing-protein	gnl\|CDD\|224917	COG2006, COG2006, Uncharacterized conserved protein [Function unknown].	1.85974e-133
NZ_CP011456.1\|WP_053539306.1\|2963543_2964806_+\|organoarsenical-effux-MFS-transporter-ArsJ	gnl\|CDD\|340883	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters. This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.29719e-11
NZ_CP011456.1\|WP_081424365.1\|2959209_2960643_-\|DUF697-domain-containing-protein	gnl\|CDD\|368297	pfam05128, DUF697, Domain of unknown function (DUF697). Family of bacterial hypothetical proteins that is sometimes associated with GTPase domains.	1.62458e-42
NZ_CP011456.1\|WP_053539305.1\|2954777_2955062_-\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl\|CDD\|224937	COG2026, RelE, Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning].	9.12397e-14
NZ_CP011456.1\|WP_053539303.1\|2951630_2952380_-\|M50-family-metallopeptidase	gnl\|CDD\|315961	pfam13398, Peptidase_M50B, Peptidase M50B-like. This is a family of bacterial and plant peptidases in the same family as MEROPS:M50B.	2.58988e-45
NZ_CP011456.1\|WP_053539312.1\|2972885_2973482_-\|urease-accessory-protein-UreG	gnl\|CDD\|349776	cd05540, UreG, urease accessory protein UreG. UreG is one of the four accessory proteins of urease. Urease is an enzyme which catalyzes the decomposition of urea to form ammonia and carbon dioxide. Bacterial urease is a trimer of three subunits which are encoded by genes ureA, ureB, and ureC. Up to four accessory proteins (ureD, ureE, ureF, and ureG) are required for urease catalytical function. UreG may play an important role in nickel incorporation of the urease metallocenter. UreG is a member of the Fer4_NifH superfamily which contains an ATP-binding domain. Proteins in this superfamily use the energy from hydrolysis of NTP to transfer electron or ion.	3.85312e-131
NZ_CP011456.1\|WP_053539301.1\|2948959_2950012_-\|permease	gnl\|CDD\|223773	COG0701, COG0701, Predicted permeases [General function prediction only].	1.07023e-72
NZ_CP011456.1\|WP_053539307.1\|2965032_2966109_+\|ACR3-family-arsenite-efflux-transporter	gnl\|CDD\|213563	TIGR00832, Uncharacterized_transporter_slr0944, arsenical-resistance protein. The Arsenical Resistance-3 (ACR3) Family (TC 2.A.59) The first protein of the ACR3 family functionally characterized was the ACR3 protein of Saccharomyces cerevisiae. It is present in the yeast plasma membrane and pumps arsenite out of the cell in response to the pmf. Similar proteins are found in bacteria, often as part of a four gene operon with an regulatory protein ArsR, a protein of unknown function ArsH, and an arsenate reductase that converts arsenate to arsenite to facilitate transport. [Cellular processes, Detoxification, Transport and binding proteins, Anions].	1.30743e-148
NZ_CP011456.1\|WP_053539308.1\|2966145_2966934_+\|Nif3-like-dinuclear-metal-center-hexameric-protein	gnl\|CDD\|376614	pfam01784, NIF3, NIF3 (NGG1p interacting factor 3). This family contains several NIF3 (NGG1p interacting factor 3) protein homologs. NIF3 interacts with the yeast transcriptional coactivator NGG1p which is part of the ADA complex, the exact function of this interaction is unknown.	2.69384e-87
NZ_CP011456.1\|WP_053539300.1\|2948011_2948776_-\|TIGR03943-family-protein	gnl\|CDD\|274870	TIGR03943, TIGR03943, TIGR03943 family protein. Members of this occur in gene pairs with members of pfam03773. The N-terminal region contains several predicted transmembrane helix regions while the few invariant residues (G, CxxD, and W) occur in the C-terminal region.	4.41045e-88
NZ_CP011456.1\|WP_027403870.1\|2957446_2958079_+\|Uma2-family-endonuclease	gnl\|CDD\|368559	pfam05685, Uma2, Putative restriction endonuclease. This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. A small number of member proteins also contain pfam02861 domains that are involved in protein interactions. Solutions of several structures for members of this family show that it is likely to be acting as an endonuclease.	4.8192e-14
NZ_CP011456.1\|WP_053541282.1\|2962415_2963432_+\|ArsJ-associated-glyceraldehyde-3-phosphate-dehydrogenase	gnl\|CDD\|169599	PRK08955, PRK08955, glyceraldehyde-3-phosphate dehydrogenase; Validated.	0
NZ_CP011456.1\|WP_053539304.1\|2952930_2954100_-\|formate-dependent-phosphoribosylglycinamide-formyltransferase	gnl\|CDD\|236454	PRK09288, purT, formate-dependent phosphoribosylglycinamide formyltransferase.	0
NZ_CP011456.1\|WP_053539310.1\|2969886_2970093_-\|hypothetical-protein	gnl\|CDD\|177775	PLN00180, PLN00180, NDF6 (NDH-dependent flow 6); Provisional.	0.000821283
NZ_CP011456.1\|WP_053541283.1\|2971739_2972159_-\|thioredoxin-family-protein	gnl\|CDD\|239245	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox state of target proteins via the reversible oxidation of an active site dithiol, present in a CXXC motif, partially exposed at the protein's surface. TRX reduces protein disulfide bonds, resulting in a disulfide bond at its active site. Oxidized TRX is converted to the active form by TRX reductase, using reducing equivalents derived from either NADPH or ferredoxins. By altering their redox state, TRX regulates the functions of at least 30 target proteins, some of which are enzymes and transcription factors. It also plays an important role in the defense against oxidative stress by directly reducing hydrogen peroxide and certain radicals, and by serving as a reductant for peroxiredoxins. At least two major types of functional TRXs have been reported in most organisms; in eukaryotes, they are located in the cytoplasm and the mitochondria. Higher plants contain more types (at least 20 TRX genes have been detected in the genome of Arabidopsis thaliana), two of which (types f amd m) are located in the same compartment, the chloroplast. Also included in the alignment are TRX-like domains which show sequence homology to TRX but do not contain the redox active CXXC motif. Group II proteins, in addition to either a redox active TRX or a TRX-like domain, also contain additional domains, which may or may not possess homology to known proteins.	6.11811e-19
NZ_CP011456.1\|WP_053539309.1\|2968132_2969785_-\|MBL-fold-metallo-hydrolase	gnl\|CDD\|224157	COG1236, YSH1, Predicted exonuclease of the beta-lactamase fold involved in RNA processing [Translation, ribosomal structure and biogenesis].	1.78978e-83

>NZ_CP011456.1|WP_081424365.1|2959209_2960643_-|DUF697-domain-containing-protein
MKLQRPILVGGLGLSFSLWMLDSWHNSIVQVGEFGLLSALAVGGGLWLLKKNQPQLGEQLNDIVAARTVVEQAIAQTEVIINQLSQEAANHPHLAILREKLAKLPLELNRKEIFIAVTGGKSVGKSTVIKVLKTSPSLPGLSLHFSETAPLFSVVGENSDVVTLSEMQKSDFVLFLTNGDLTDSEFQVLQQLKAVKQPSLLVFNKQDQYQPDQRATVFQSLKQRIGANVVGTAASPVPVKVRKHQEDGSFQEWMEQPTPDIQQLTQQIGEVVGQQREQLVCNTTNHRVLLLKAEAKNCLNGVRRDQATPFVEQYQWIAAAAAFANPVPALDILATAAITAQMVIDLGNIYQQKISLEQAQQVAGTMGSLMLKLGLVELSTRAVTGIMKTNVATFVAGGMVEGVSAAYLTRVAGLSLVEYFEQQEIALESGSALNLDKLHQVLQTVFQQNQKMAVLEAFVKQGVKRLLPEAKPVEVVA
>NZ_CP011456.1|WP_027403870.1|2957446_2958079_+|Uma2-family-endonuclease
MLLELKRIHVPPGQRVILENVTWKELETIIEELGEHRAARIAYDRGRLEIMSPLPEHEDDKEIISDLVKALLEELNIEFRCLGSTTFKNQFMAQGIEPDQCFYIKNEAVIRGKKRLDLTIDPPPDLALEIDITSRTHLNIYQGLKVPEVWRFENGILRINILQDGVYVESKSSLNFPDLPLIEVIPQYLEKSRTIGRNATLKAFRSWVNS
>NZ_CP011456.1|WP_027403866.1|2955036_2955264_-|hypothetical-protein
MNTLELREQIQEYVEQLSPEKLLVAVDFLAYLATREDDATQELLEIVGFKENFDHARENVKQGKVITVDQLKRKY
>NZ_CP011456.1|WP_053539305.1|2954777_2955062_-|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MTNLNENINYTVVISIDAGEFFESASAILQRKLDRCFDRLKINPRNHPNIKSLKGELSGYYRYRVGDYRVIYEVNDDLKMVTVVFIAHRSKVYE
>NZ_CP011456.1|WP_053539304.1|2952930_2954100_-|formate-dependent-phosphoribosylglycinamide-formyltransferase
MIKKLKLPQKLMLLGSGELGKEFVIAAQRLGNYIIAVDRYADAPAMQVADCAEVISMLSADDLEAVVNKHQPDFIIPEIEAIRTEKLQEFEQRGITVIPTAAATNYTMNRDRIRELAHQELGIRTAKYGYAVTLEELITISEKIGFPNVVKPVMSSSGKGQSVVNDRSEVEKAWNYAISNSRGDSQKVIVEEFINFEIEITLLTIKQWDAPTIFCSPIGHRQERGDYQESWQPAAISEDKILASQEIAKKVTDALGGAGIFGVEFFITKDEVIFSELSPRPHDTGMVTLISQNLNEFELHLRAILGLPIPHIEQLGFSASAVILASEKSDSITFTGVAEALAEKDVDIKLFGKPTAHPYRRMGVALAKGGDIQEAREKAVKAASQVKIN
>NZ_CP011456.1|WP_027403863.1|2952473_2952770_-|hypothetical-protein
MRARIENNVLFIHHEDVPEFKKGGSVVRNSYFWALRSIAGRARRYHDWEYESEVWFALERMLLSFTESGYLGYKETMLEFPLSQGEIPSVLRNAATWE
>NZ_CP011456.1|WP_053539303.1|2951630_2952380_-|M50-family-metallopeptidase
MREPSKNSKPLFTQETPTEVEQMGLTWLVAAAIVTAIMWQIPIGNYILYPFSILATWFHEMGHGLMALMLGGQFQKLEIFGNGSGVAHYTLSNTWGYLGIGLVAAAGPMGPPIAGASLILASGSWKTTSLSLKILGGFLLLSTLIWVRSWFGFVAIPLLGLMILGIALKTPLWVQGFAIQFLGVQACVSTYHQLDYLFSYTAGPLRLSDTGQMQRYLFLPYWFWGLLMAIASLIILVQSLRVVYSTNQQ
>NZ_CP011456.1|WP_053539302.1|2950428_2951403_-|DUF362-domain-containing-protein
MSTQKPSVSLIRAKSYEQEALKESLETLLEPLGGMAAFVKPGNRVLLKPNLLTGSRPTKECTTRPELVRAVAEMVIAVGGNPFLGDSPAFGSAKGVAIANGLLPILEELKLPLVEFHGKRYQTVNDNFNHLLLSKEAMEADVIINLPKVKSHMQLTLTLGVKNLFGCVPGKMKAWWHMESGKDADKFGEMLVETARAINPTLTILDGIIGHEGNGPSGGEPRNLEILAASSNVFALDRAMLEVLQVAPAQVPTVAASQRLGICPELSDIHFPNLSPDLLQITDWQLPEKLMPIDFAMPRVIKSTFRHLYIRFIKEPMSAYRVSR
>NZ_CP011456.1|WP_053539301.1|2948959_2950012_-|permease
MNQLNNGFTIFLSLLVEAMPFLLLGVFLSSLLLLFVDESKLVEKMPKNPLLGALFGSMIGFLFPVCECGNVPVARRLLMQGVPTPVAIGFLLAAPTINPIVIWSTWTAFRDQPEIVVLRVVFSLAIATIIGFIFSFQPDLVPFLQPAIARYLKFNPPAPPKTTRRGQQSQLQPQTNTPNLLQSGTYILGGRTGASQRIDNNYSEVAAISNLSKPLSEKLRSLLDNIVQELRELGGVMVLGSAIAAATQVLAPRDLILSLGAGPISSILAMLVLAAVVSICSTVDAFFALSFASTFTSGSLLAFLVFGPMIDIKGIGLMLSIFKPKALIYLFFLAGQLTLLFTLFLNLHVI
>NZ_CP011456.1|WP_053539300.1|2948011_2948776_-|TIGR03943-family-protein
MLNSQTKAPNKLIPWLDVLAITAWGILMLKYWLTGKLYLLIHPDFFWLVVVAGIALLIIGFSKGLQLWKNRHRPQISNPGHINLFPPGWGSFLLLTTAILGLMITPRVFASQTALDRGVTESTGASRAQPQAFRATVRPEERSLVDWVRTLNVYPEPDSYTGQKAKVQGFVIHQPNVSEEYIFLARFVLSCCAADAYPVGLPVQISGTRQQYPPDTWLEIEGQMTTQTVAEKRQLTIKANSIKKIPQPQNPYSY
>NZ_CP011456.1|WP_053541282.1|2962415_2963432_+|ArsJ-associated-glyceraldehyde-3-phosphate-dehydrogenase
MTIKVGINGFGRMGRLSVRAAWDWPEIEFVHINETKGGTEAAAHLLKFDSVHGRWTPEVEAVENQVVIDGKSLSFTEYSQPGEVPWEDFGVDIVLECSGKFRTPATLDPYFKRGVQKVIVAAPVKQEALNIVMGVNDHLYEPDKHHLLTAASCTTNCLAPVVKVIHEGLGIKHGVITTIHDNTNTQTIVDAPHKDLRRARATSMSLIPTSTGSATAIGLIYPELNGKLNGLAVRVPLLNASLTDCVFEVVRPTTIAEVNDLLKTASAQEPLIGILGYEERPLVSIDYKDDPRSAIIDALSTMVINETQVKILAWYDNEWGYVNRMTELARKVALSLQK
>NZ_CP011456.1|WP_053539306.1|2963543_2964806_+|organoarsenical-effux-MFS-transporter-ArsJ
MASTTASNSNFKNYILVTLAYWGFTLTDGALRMLVLLYFNKIGYTPIQIASLFLFYEVFGIVTNFLGGWIGSQFGLKVTLYTGIGLQVFSLIMLSFLNPGWAQWLSVLYVMVAQAFSGIAKDLTKMSSKSAIRLVVPQDAQSSLFKWVAVLTGSKNALKGVGFFLGSALLSSVGFINSLWIMAGGLALIMFSGLMLPKAMGKIKKKVKFSQLFSKSAEINILSAARFFLFGSRDVWFVVALPVFLRGTLGWSFYQVGGFLACWVIGYGIIQFLAPTLMQRFGSGRPPQSQTIRFWTFTLTAVPGAIALALQLGLPANIVIIAGLLVFGVVFAFNSAVHSYLVLAFTDDDKVALNVGFYYMANSGGRLVGTVLSGLVYQIFGLVGCLWTSMFFVFAAGLVSLKLPNPQPSKSIAWKAGDGE
>NZ_CP011456.1|WP_053539307.1|2965032_2966109_+|ACR3-family-arsenite-efflux-transporter
MEYVTKQPTIKRLSFLDRFLTLWIFLAMATGVGLGYFFPTIEVFINHFQIGTTNIPIAIGLILMMYPPLAKVKYEELGDVFRNKKILGLSLSLTWIIAPIVMFTLAILFLRDKPEYMTGLIMVGIAPCIAMVIVWSDLAKGDTEYTAGLVAFNSIFQILFYSVYAWFFLTILPPLFGVQGTIVNISIREIANSVFIYLGIPFLAGFMTRLILVKAKGKQWYNQEFIPKISPITLIALLFTIMVMFSLKGNLIVQIPLDVVRIAIPLIIYFLFMFLSAFYLAWKIKADYAKAASVAFTAAGNNFELAIAVAISVFGIKSGVAFAAVIGPLVEVPVLISLVNVSFWIKKHFFRLSPPVGL
>NZ_CP011456.1|WP_053539308.1|2966145_2966934_+|Nif3-like-dinuclear-metal-center-hexameric-protein
MKVTDLITWFEEWANPAWCESWDNCGWQVEPGVLSTEARVLVCLTPTLAVMQEAIALHANLIFAHHPLIFHPPKSFRTGDALTEMVRLAFTHNIGIYTAHTNFDQVADGTADVLAQLLELQEVSPIVPTQAGLGYGRVGNIKPTLTLQELINNIQSQLNPPHLIFSPMADLQQQISRVAVLGGSGAGYISAVVKTNAQVYLTSDCKFHQFQESRDRGIILIDAGHYATERPACDRLVQKFQALNLDWVQLSQKDEDFRQFLT
>NZ_CP011456.1|WP_027403878.1|2967682_2967994_+|hypothetical-protein
MLHRKIYQLCCDGREVCVFLRDQQRWIERARIIDIEGDLVTLRYETDEEDEVCSWEEMVRLESIGSVTQKLASVQRGNIDPLTTEECPEAERIPNPYTDLNPD
>NZ_CP011456.1|WP_053539309.1|2968132_2969785_-|MBL-fold-metallo-hydrolase
MMNNISIDAGTTANELECFPYSVQHQDEGVCLLVRMGPHRIMLDFGLTNISPVAQEMTQSAHHGIPADLVLISHAHPDHARGLLTLHQAFPLLPIYASEVTTKLLPLNWPDEELPGILSFCQALPLRSPVEIRENLIVELFPAGHLPGAVAILLTYHTPNRDYKLLYTGDFFLSNSRLVEGLRLDELRGLNLDVLLIEGSYGTSRHTHRRNQENQLAERIHRAISSSGTEKNNSVILPTPALGLGQELLMLLRSHHHFTGRDLDIWVDGAVAAGCDAYLELLPHLPAAVQNFARHQPLFWDERVKPRVRRLKPENLATLGTSPCIVLTDSSADLRKYCQYNTGNWLILLPEKIDLPVNPEYLAPTKFESYLLAQHSDRPGTTQLIHNLRPQHVIFVHGSPSYLADLTCLEELQNRYHVHSPAAGTLVELPIGETFLQPAAPETNYEGELTELGTVITITLPDTVTADPRWRQFADTGLIEARWQGEDLVLRGLSPRELVNPNHLRPNSGDVACCGSCRHQRGQRCWNPAAPLYNFKVTLDGYCPAFERLT
>NZ_CP011456.1|WP_053539310.1|2969886_2970093_-|hypothetical-protein
MVKISSDFAQMQKHDIKIKKSEVKGIKLMDIKLILVGLTVIFTVSCLFFGTKNGFYDSDNYHGNGSAH
>NZ_CP011456.1|WP_053539311.1|2970724_2971270_-|hypothetical-protein
MYNYKQAILSLFLVVSCTVISSCDSSNTADNPTPETIPNSKINPKKLQKSPTPTVEPYSNNKAISGKTTHVTVYTSDAQCQELIPQKADVSAAEPMNEAIGKIFKEQSTADFSVSGYRVNVKNGVAIVDIRISPDSKRQVSSLSSCEQFALFSSVRKTLISNSQWKIKDVRFTERGEDIIL
>NZ_CP011456.1|WP_053541283.1|2971739_2972159_-|thioredoxin-family-protein
MTHAQRQAFLKTSRLGKLLGVAHLLPESDVQPTILSISEKTFTKNVLESPIPVLVNFTAPWSEFCKIIHPLLLQFQIQCSDRIKLVEINADQNFKLSNTYRLKSLPTLLLIENGIVKQRLEEFRSQEDLRLALKSIQIS
>NZ_CP011456.1|WP_053539312.1|2972885_2973482_-|urease-accessory-protein-UreG
MTALRVGVAGPVGSGKTALVDALCKGLREKYQLAVVTNDIYTQEDAQFLVRSQALSSDRILGVETGGCPHTAIREDASMNLAAIEQLEEKFTNLDLVFLESGGDNLAATFSPELVDLTIYVIDVAAGDKIPRKGGPGITKSDLLVINKTDLAPYVGADLNVMERDAKKMRGDKPFIFTNLKTQAGLGDVIQFVNAAIC

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Crispr_ID: NZ_CP011456_23

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011456_23

2981038-2981451

Orphan

Consensus_repeat	Method
CGTNTCAGTNCCNGTGTC	CRT

8 spacers

The CRISPR arrays of NZ_CP011456_23

>merge|NZ_CP011456|23|2981038-2981451|CRT
CGTGTCAGTGCCAGTGTCAGTGCCAGTGTCAGTTCCGGTATCAGTGCCAGTGTCGGTTCCCGTATCAGTTCCCGTGTCGGTTCCCGTATCAGTGCCAGTGTCAGTTCCCGTATCAGTGCCAGTGTCAGTTCCCGTGTCAGTGCCAGTGTCAGTTCCCGTGTCAGTTCCCGTATCAGTGCCAGTGTCGGTTCCCGTATCAGTGCCAGTGTCGGTTCCCGTATCAGTTCCCGTATCAGTGCCAGCGTCGGTTCCCGTATCAGTGCCAGCGTCAGTTCCCGTGTCGGTTCCCGTGTCAGTTCCCGTGTCGGTTCCCGTGTCAGTTCCCGTGTCGGTTCCCGTATCAGTGCCAGTGTCGGTTCCCGTATCAGTTCCCGTATCAGTGCCAGCGTCGGTTCCCGTGTCGGTTCCCGTGTC

>NZ_CP011456|23|2|2981038-2981451|CRT
CGTGTCAGTGCCAGTGTC	AGTGCCAGTGTCAGTTCC
GGTATCAGTGCCAGTGTC	GGTTCCCGTATCAGTTCCCGTGTCGGTTCC
CGTATCAGTGCCAGTGTC	AGTTCCCGTATCAGTGCCAGTGTCAGTTCC
CGTGTCAGTGCCAGTGTC	AGTTCCCGTGTCAGTTCC
CGTATCAGTGCCAGTGTC	GGTTCCCGTATCAGTGCCAGTGTCGGTTCCCGTATCAGTTCC
CGTATCAGTGCCAGCGTC	GGTTCCCGTATCAGTGCCAGCGTCAGTTCCCGTGTCGGTTCC
CGTGTCAGTTCCCGTGTC	GGTTCCCGTGTCAGTTCC
CGTGTCGGTTCCCGTATC	AGTGCCAGTGTCGGTTCCCGTATCAGTTCCCGTATCAGTGCCAGCGTCGGTTCC
CGTGTCGGTTCCCGTGTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011456.1\|WP_027403903.1\|3003890_3004370_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|259872
NZ_CP011456.1\|WP_053539315.1\|2975467_2978254_-\|efflux-RND-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|223911
NZ_CP011456.1\|WP_053539324.1\|3000426_3001518_+\|calcium/proton-exchanger	unknown	unknown	gnl\|CDD\|273043
NZ_CP011456.1\|WP_053541283.1\|2971739_2972159_-\|thioredoxin-family-protein	unknown	unknown	gnl\|CDD\|239245
NZ_CP011456.1\|WP_053539320.1\|2986021_2987929_+\|squalene--hopene-cyclase	unknown	unknown	gnl\|CDD\|273661
NZ_CP011456.1\|WP_053539322.1\|2996282_2997041_+\|DUF1868-domain-containing-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_027403890.1\|2974729_2975116_-\|DUF2267-domain-containing-protein	unknown	unknown	gnl\|CDD\|378360
NZ_CP011456.1\|WP_053539313.1\|2973487_2974174_-\|urease-accessory-protein-UreF	unknown	unknown	gnl\|CDD\|223900
NZ_CP011456.1\|WP_053539323.1\|2997327_2999979_-\|DUF3536-domain-containing-protein	unknown	unknown	gnl\|CDD\|212109
NZ_CP011456.1\|WP_053539312.1\|2972885_2973482_-\|urease-accessory-protein-UreG	unknown	unknown	gnl\|CDD\|349776
NZ_CP011456.1\|WP_053539311.1\|2970724_2971270_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053539316.1\|2978405_2978732_-\|XisI-protein	unknown	unknown	gnl\|CDD\|370165
NZ_CP011456.1\|WP_053539319.1\|2984698_2985868_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|213815
NZ_CP011456.1\|WP_053539321.1\|2995167_2996154_-\|DNA-polymerase-III-subunit-delta	unknown	unknown	gnl\|CDD\|180982
NZ_CP011456.1\|WP_053541284.1\|2978719_2979136_-\|fatty-acid-oxidation-protein-subunit-alpha	unknown	unknown	gnl\|CDD\|370136
NZ_CP011456.1\|WP_053541285.1\|3002363_3002900_+\|peptidoglycan-binding-protein	unknown	unknown	gnl\|CDD\|366659
NZ_CP011456.1\|WP_053539317.1\|2979217_2979895_+\|phosphorylase	unknown	unknown	gnl\|CDD\|274594
NZ_CP011456.1\|WP_053539325.1\|3002944_3003772_-\|type-I-methionyl-aminopeptidase	unknown	unknown	gnl\|CDD\|237252
NZ_CP011456.1\|WP_053539314.1\|2974151_2974592_-\|urease-accessory-protein-UreE	unknown	unknown	gnl\|CDD\|237322
NZ_CP011456.1\|WP_053539326.1\|3004627_3007459_-\|insulinase-family-protein	unknown	unknown	gnl\|CDD\|223685

Protein	Function_ID	Function_description	E-value
NZ_CP011456.1\|WP_027403903.1\|3003890_3004370_-\|hypothetical-protein	gnl\|CDD\|259872	cd04210, Cupredoxin_like_1, Uncharacterized Cupredoxin-like subfamily. Cupredoxins contain type I copper centers and are involved in inter-molecular electron transfer reactions. Cupredoxins are blue copper proteins because they have an intense blue color due to the presence of a mononuclear type 1 (T1) copper site. Structurally, the cupredoxin-like fold consists of a beta-sandwich with 7 strands in 2 beta-sheets, which is arranged in a Greek-key beta-barrel. Some of these proteins have lost the ability to bind copper. Majority of family members contain multiple cupredoxin domain repeats; ceruloplasmin and coagulation factors V/VIII have six repeats; Laccase, ascorbate oxidase, and spore coat protein A, and multicopper oxidase CueO contain three repeats; and nitrite reductase has two repeats. Others are mono-domain cupredoxins, such as plastocyanin, pseudoazurin, plantacyanin, azurin, rusticyanin, stellacyanin, quinol oxidase and the periplasmic domain of cytochrome c oxidase subunit II.	9.989e-70
NZ_CP011456.1\|WP_053539315.1\|2975467_2978254_-\|efflux-RND-transporter-permease-subunit	gnl\|CDD\|223911	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms].	3.93269e-176
NZ_CP011456.1\|WP_053539324.1\|3000426_3001518_+\|calcium/proton-exchanger	gnl\|CDD\|273043	TIGR00378, cax, calcium/proton exchanger (cax). [Transport and binding proteins, Cations and iron carrying compounds].	5.13703e-133
NZ_CP011456.1\|WP_053541283.1\|2971739_2972159_-\|thioredoxin-family-protein	gnl\|CDD\|239245	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox state of target proteins via the reversible oxidation of an active site dithiol, present in a CXXC motif, partially exposed at the protein's surface. TRX reduces protein disulfide bonds, resulting in a disulfide bond at its active site. Oxidized TRX is converted to the active form by TRX reductase, using reducing equivalents derived from either NADPH or ferredoxins. By altering their redox state, TRX regulates the functions of at least 30 target proteins, some of which are enzymes and transcription factors. It also plays an important role in the defense against oxidative stress by directly reducing hydrogen peroxide and certain radicals, and by serving as a reductant for peroxiredoxins. At least two major types of functional TRXs have been reported in most organisms; in eukaryotes, they are located in the cytoplasm and the mitochondria. Higher plants contain more types (at least 20 TRX genes have been detected in the genome of Arabidopsis thaliana), two of which (types f amd m) are located in the same compartment, the chloroplast. Also included in the alignment are TRX-like domains which show sequence homology to TRX but do not contain the redox active CXXC motif. Group II proteins, in addition to either a redox active TRX or a TRX-like domain, also contain additional domains, which may or may not possess homology to known proteins.	6.11811e-19
NZ_CP011456.1\|WP_053541284.1\|2978719_2979136_-\|fatty-acid-oxidation-protein-subunit-alpha	gnl\|CDD\|370136	pfam08814, XisH, XisH protein. The fdxN element, along with two other DNA elements, is excised from the chromosome during heterocyst differentiation in cyanobacteria. The xisH as well as the xisF and xisI genes are required.	2.79227e-78
NZ_CP011456.1\|WP_027403890.1\|2974729_2975116_-\|DUF2267-domain-containing-protein	gnl\|CDD\|378360	pfam10025, DUF2267, Uncharacterized conserved protein (DUF2267). This domain, found in various hypothetical bacterial proteins, has no known function.	1.36704e-30
NZ_CP011456.1\|WP_053539323.1\|2997327_2999979_-\|DUF3536-domain-containing-protein	gnl\|CDD\|212109	cd10797, GH57N_APU_like_1, N-terminal putative catalytic domain of mainly uncharacterized prokaryotic proteins similar to archaeal thermoactive amylopullulanases; glycoside hydrolase family 57 (GH57). This subfamily of mainly uncharacterized bacterial proteins, shows high sequence homology to GH57 archaeal thermoactive amylopullulanases (APU, E.C 3.2.1.1/41). Thermoactive APUs are type II pullulanases with both pullulanolytic and amylolytic activities. They have an acid pH optimum and the presence of Ca2+ might increase their activity, thermostability, and substrate affinity.	0
NZ_CP011456.1\|WP_053539312.1\|2972885_2973482_-\|urease-accessory-protein-UreG	gnl\|CDD\|349776	cd05540, UreG, urease accessory protein UreG. UreG is one of the four accessory proteins of urease. Urease is an enzyme which catalyzes the decomposition of urea to form ammonia and carbon dioxide. Bacterial urease is a trimer of three subunits which are encoded by genes ureA, ureB, and ureC. Up to four accessory proteins (ureD, ureE, ureF, and ureG) are required for urease catalytical function. UreG may play an important role in nickel incorporation of the urease metallocenter. UreG is a member of the Fer4_NifH superfamily which contains an ATP-binding domain. Proteins in this superfamily use the energy from hydrolysis of NTP to transfer electron or ion.	3.85312e-131
NZ_CP011456.1\|WP_053539313.1\|2973487_2974174_-\|urease-accessory-protein-UreF	gnl\|CDD\|223900	COG0830, UreF, Urease accessory protein UreF [Posttranslational modification, protein turnover, chaperones].	3.76444e-75
NZ_CP011456.1\|WP_053539316.1\|2978405_2978732_-\|XisI-protein	gnl\|CDD\|370165	pfam08869, XisI, XisI protein. The fdxN element, along with two other DNA elements, is excised from the chromosome during heterocyst differentiation in cyanobacteria. The xisH as well as the xisF and xisI genes are required.	1.76394e-55
NZ_CP011456.1\|WP_053539319.1\|2984698_2985868_-\|glycosyltransferase	gnl\|CDD\|213815	TIGR03469, HpnB, hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.	0
NZ_CP011456.1\|WP_053539321.1\|2995167_2996154_-\|DNA-polymerase-III-subunit-delta	gnl\|CDD\|180982	PRK07452, PRK07452, DNA polymerase III subunit delta; Validated.	0
NZ_CP011456.1\|WP_053539320.1\|2986021_2987929_+\|squalene--hopene-cyclase	gnl\|CDD\|273661	TIGR01507, squalene-hopene_cyclase, squalene-hopene cyclase. SHC is an essential prokaryotic gene in hopanoid (triterpenoid) biosynthesis. Squalene hopene cyclase, an integral membrane protein, directly cyclizes squalene into hopanoid products. [Fatty acid and phospholipid metabolism, Other].	0
NZ_CP011456.1\|WP_053541285.1\|3002363_3002900_+\|peptidoglycan-binding-protein	gnl\|CDD\|366659	pfam01471, PG_binding_1, Putative peptidoglycan binding domain. This domain is composed of three alpha helices. This domain is found at the N or C-terminus of a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. This family is found N-terminal to the catalytic domain of matrixins. The domain is found to bind peptidoglycan experimentally.	3.39879e-17
NZ_CP011456.1\|WP_053539317.1\|2979217_2979895_+\|phosphorylase	gnl\|CDD\|274594	TIGR03468, HpnG, hopanoid-associated phosphorylase. The sequences in this family are members of the pfam01048 family of phosphorylases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. This gene is adjacent to the genes PhnA-E and squalene-hopene cyclase (which would be HpnF) in Zymomonas mobilis and their association with hopene biosynthesis has been noted in the literature. Extending the gene symbol sequence, we suggest the symbol HpnG for the product of this gene. Hopanoids are known to be components of the plasma membrane and to have polar sugar head groups in Z. mobilis and other species.	3.99641e-15
NZ_CP011456.1\|WP_053539325.1\|3002944_3003772_-\|type-I-methionyl-aminopeptidase	gnl\|CDD\|237252	PRK12896, PRK12896, methionine aminopeptidase; Reviewed.	5.26919e-168
NZ_CP011456.1\|WP_053539314.1\|2974151_2974592_-\|urease-accessory-protein-UreE	gnl\|CDD\|237322	PRK13261, ureE, urease accessory protein UreE; Provisional.	1.23048e-46
NZ_CP011456.1\|WP_053539326.1\|3004627_3007459_-\|insulinase-family-protein	gnl\|CDD\|223685	COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only].	6.2546e-83

>NZ_CP011456.1|WP_053539317.1|2979217_2979895_+|phosphorylase
MSTLILVPQGAEYQAVCRGLRRVPNSQTKVLAIPMGIEPVRKYLQQFTHNQANRMLMMGLCGSLSQKYQIGDIVLYQNCLYQGNLQEGDNSFTADIHNKLGDHVSLVKGLTSDRLLYKATQKRELHEQSGADVVDMEGYAFLEFFQQPSDAVSPPVQVAILRVVSDDAHHDIPNITSAIGADGSLQPLPLAWELIRQPPAATRLITGSLKGLKALTTVTQLLFTA
>NZ_CP011456.1|WP_053541284.1|2978719_2979136_-|fatty-acid-oxidation-protein-subunit-alpha
MSAKDIFHESVRKALEKEQWLITDDPLKFKFGDVNFQVDLAAQKLLGAEKAGEKIAVEIKSFLNPSAITDFYAALGQFLSYRLALETIEPNRILYLAIPLDAYEIFFQLEFTQIALQRYQVPLVVYEPRKEVIFKWIK
>NZ_CP011456.1|WP_053539316.1|2978405_2978732_-|XisI-protein
MDKIAKYREYIQTLLTNYAKDDDEEELQLIFDTQRDHYQWMNVGWQELHRVYRSVMHFDIKDGKIWLQQNLTDQNPAEELVKMGVPKEDIVLGLHPPYKRPYTDYGVA
>NZ_CP011456.1|WP_053539315.1|2975467_2978254_-|efflux-RND-transporter-permease-subunit
MVQTNTQSTRESFNISKLAIKFSWLTVCFWIGIAVAGILAFSSLKYALFPDITFPVVVVNAQAPLTSALDTEEQLTKPLEASLKSLAGLEDIRSSTYPGQTAVISSFVVGTNLETATKKISQIVNQLNLPKNATKKIIPLNLNESAAVSYAIESTAGKIDNLQQIAKAKIVPAIAKLPGVLKVSLLGDGNTRSQERRGAGPAPVSPISQEEERRRNVLLPSSGTLVRFNGKQALAFQVIKKGNANTLEVVSRVEKEVQQLRLSLKDVTLTLAATQAEYIHNATHSTIDALIEAIVLSVVVIFPFLWNWQATLISALAIPVSLLGTFIVMAIYGFNLETITLLALALVIGSIVDDAIVDVENIMRHIEEGKTPREAALIATNEIGLTVTAATLTAVAVFLPIGLMGGVIGQFFKPFGITVSAAMLTSLLVARTLSPVLAIYWLKAKSSSSPQKQSKIWLEFDQAYRNLLAWSLQHRLIVVGLAVGSLIAGLALIPLIPKGFIPKLDRGEFNIVYTAPLPNLPGNLGQAGQGGRQQPGGQPGQAGQKDKLENSSLSAAALAASSSSIPIPNPLNDSLDVAKKLEEVVRKSPAVATVFTTVGSREGEPNKGTLYIKLKTDSEVKTAEVQDQLRAALPKLAGVTTSVEDIQFVDTGGQKPLQIALQGNDLQALTTAAKAVKARIEKISGFADITITGASDQQDPILQIERLNNQRVAYIGANLGQNLTLGDATDKVVAEAKAVIPAGVSLNLGGDSARQNEVFGSFGTTLGLSALCIIVVLIWLFKSWVDPIVIGLSLPLAIVGALLALLFTKSDFGMISLIGFVFLLGITNKNAILIVDYINQLRDSGLERTEAILKAGPVRLRPIMMTTAATILGMVPIALGLGAGSELRSPMAVSIAGGLVSSTILSLFVVPVFYAILDDWFPRKKIKQ
>NZ_CP011456.1|WP_027403890.1|2974729_2975116_-|DUF2267-domain-containing-protein
MEYTEFITHVQSLAQSEFREEAEVATRATFESIKKIIPSDEREELAAQIPQELREYLYGGETEPIQSLNLQEFIKCISDKEKVEPTIAAIHVRAVFAVVQLAVSPENFRKFYNYFSHDYEELFTISLA
>NZ_CP011456.1|WP_053539314.1|2974151_2974592_-|urease-accessory-protein-UreE
MLTFTQRQPPNDDTIVTFTLSLTAEERTRSRHKFTLANGKEVFLRLARGTVLNDGDILINENESMNMRIIAKPEPVLTALAEIPLLLRAAYHLGNRHVSVEITPTYLRLSPDTVLAAMLTQLGLEIKEEVVPFQPELGAYGNHSHT
>NZ_CP011456.1|WP_053539313.1|2973487_2974174_-|urease-accessory-protein-UreF
MEITLTHSHFLAILQLASPALPVGAYGYSEGLEMLVENGTITNIENLQDWLKSELIYGSIRLDAAVMTRGFHAIQSGDRSALKRWNLWLSAARDTEELRAASWQMGRSLMQLLGKLEPDILPVVNAVGYPSNYAIAFAIACAHWDINIQTALLAYLHSWANNLITAGIKLIPLGQTAGQELLLGLQPLLITTVGEILRMEDDDLGCCSWGLSLASMQHETQYTRLFRS
>NZ_CP011456.1|WP_053539312.1|2972885_2973482_-|urease-accessory-protein-UreG
MTALRVGVAGPVGSGKTALVDALCKGLREKYQLAVVTNDIYTQEDAQFLVRSQALSSDRILGVETGGCPHTAIREDASMNLAAIEQLEEKFTNLDLVFLESGGDNLAATFSPELVDLTIYVIDVAAGDKIPRKGGPGITKSDLLVINKTDLAPYVGADLNVMERDAKKMRGDKPFIFTNLKTQAGLGDVIQFVNAAIC
>NZ_CP011456.1|WP_053541283.1|2971739_2972159_-|thioredoxin-family-protein
MTHAQRQAFLKTSRLGKLLGVAHLLPESDVQPTILSISEKTFTKNVLESPIPVLVNFTAPWSEFCKIIHPLLLQFQIQCSDRIKLVEINADQNFKLSNTYRLKSLPTLLLIENGIVKQRLEEFRSQEDLRLALKSIQIS
>NZ_CP011456.1|WP_053539311.1|2970724_2971270_-|hypothetical-protein
MYNYKQAILSLFLVVSCTVISSCDSSNTADNPTPETIPNSKINPKKLQKSPTPTVEPYSNNKAISGKTTHVTVYTSDAQCQELIPQKADVSAAEPMNEAIGKIFKEQSTADFSVSGYRVNVKNGVAIVDIRISPDSKRQVSSLSSCEQFALFSSVRKTLISNSQWKIKDVRFTERGEDIIL
>NZ_CP011456.1|WP_053539319.1|2984698_2985868_-|glycosyltransferase
MATIIFSLTLLSLVIWIFLLLFWGQFWRVNHQLEANKDKDIDNNILPTVCVIIPARNEADVIPVSLRSLLLQDYPGKFTIFLVDDQSSDGTANFAQGVAHALDKTPQLQIISSPPLPPGWTGKLWAMEQGVQTASQLKPDYFLLTDADIEHHPSNLRRLVAKAEAQKLDLVSIMVRLRCQSFWEQLLIPAFVFFFQKLYPFSWVNNPKKAIAAAAGGCILIQKEALNRIGGLQVIRQALIDDCSLAKAVKSTKGKIWLGLSTLTRSLRPYDSLKTIWDMVARSAYTQLNYSPFLLLGSLLGMILVYIVPPIGIILGLVFGNWIITLTSVIGYLLMTFAYFPITRFYKCSPAFAFSLPIIAFMYTCMTLDSALQHWQGLGGAWKGRVYAK
>NZ_CP011456.1|WP_053539320.1|2986021_2987929_+|squalene--hopene-cyclase
MQTQDRIKVKQVVDAIAASQKHLLSIQNPDGYWWAELESNVTITSEAVLLHKIWGTEKTRPLHKVENYLRSQQREHGGWELFYGDGGDLNTTVEAYMALRLLGVPATDTALLKAKSLILAKGGISKTRIFTKLHLALIGCYNWRGLPSLPPWVMLLPDNFFFNIYELSSWARSSTVPLLIVFDRKPIFNIDQPINLDELYAECIENVVWQLPKNGDWSDIFNILDDGFKLAESINFVPFRNEGIKAAEKWILERQEVTGDWGGIIPAMLNSLLALKCLDYDANDPVIERGLKAVDNFAIETENSYCVQPCVSPVWDTAWAIRALIDSGFAPNDPAIVKAGEWLIEKQILDYGDWNVKNKQGKPGAWAFEFENRFYPDVDDSAVVVMALHQAKLPNEELKKQAIDRALNWIATMQCKPGGWAAFDLNNDQEWLNSVPYGDLKAMIDPNTADVTARVLEMLGACNLSIQPDNLEKSLDYLLKEQEIEGCWFGRWGVNYIYGTSGVLSALALINPLKYARDINQGAAWLVKVQNSDGGWGETCFSYNDPSLKGKGDSTASQTAWALIGLIAAGEATGKLALDSIEKGINYLLETQKSDGTWDEIYFTGTGFPCHFYLKYHLYQQYFPLMALGRYQAIR
>NZ_CP011456.1|WP_053539321.1|2995167_2996154_-|DNA-polymerase-III-subunit-delta
MPIYVYWGEDDFAMEKAVVTLRDRILDPLWTSFNYTSFPPDQPDPIIQALNQAMTPPFGAGGRFVWLINTTLGQNCPDHILAELQRTLKVIPPDSTLLLTSRNKPDERLKSTKLLKQFATISEFSLIPPWKTELLVQSVQQVAQTIGLKISPLVAELLAESVGNDTRLLYNELEKLRLYTEGSGKPLDVNTVSELVRNTTQNTLQLATAIRTGDTPKALGILGDLSNAAEPGLRIVATLIGQFRTWLLVKMMMDSGERNPQAIAQGAEISNPKRIYFLQQEVKSLPLQQLISALPLLLELEVSLKQGASETSTLQTKVIELCQICRRT
>NZ_CP011456.1|WP_053539322.1|2996282_2997041_+|DUF1868-domain-containing-protein
MTLPEAYKTQIQHIQESSKFRVHAGVREATPFPGYTLITPPAQEDANNAAFYSKIQAYQQQLLKLPIASDLIVPVPPASFHVTVADLIWDSAFHHACAKNPQFAEDLNSQLAERFQEYQKLMTKGSPISWQMLGLIVMPRAVGMCLVPKDKRSYEEIIQFRRIIYQNRTLMGLGIEQHYHFTAHVTLGYFGEIPPELNRVNLTTMFCEFNQSLPLDTPDFLIDQVELRKFDNMTHYYRQPDWPSVNFKSMGV
>NZ_CP011456.1|WP_053539323.1|2997327_2999979_-|DUF3536-domain-containing-protein
MTLAAEIPSSYDSILPLDQEAKSSPEHDPLKTAQGVYVTVHGHFYQPPRENPYLDAIERQPSASPFHDWNERIHWECYRPNAFARVFNDRGEVVKIVNNYEYMSFNIGPTLMSWLERHDMEVYQRILEADAKSCDRLNGHGNAIAQVYNHIILPLANERDKHTQIRWGKEDFRSRFGREPEGMWLAETAVDYATLEALVAEGIKFIILAPSQAQRCRLIPTGDDSGSQWHEVGGNQIDPTRPYRCYLDSDESAKTSTAYIDIFFYDGPISRDMGFSDVVYNSHHFAGRIGAAIRGDHRQSQLISVATDGETFGHHKKGTEKTLAYAFIGEFPRHGWTVTNFAHYLSLNPPSWEVKLKSVTAWSCAHGVDRWQDDCGCGGEGGVWHQKWRRPLRNALNWLRDQLIDVYEEYGNPLFRDPWQARDEYIYVMGDRTPANIHRFLSHHQTRKLQAAEQVEALRLLEMQRHSLLMFTSCGWFFEEISRPEGTQILRYASRALELAGDVAGVQLEKGFLKRLGLAPSNVEEFKHGAEIYRQLVLTAQIDFKQVASHYAITSLFNHHKNTLPQQQTDKHHHIPHQRVYCYNAHELDYHKQSLGPLTMAVGHLQLVSDITWESENLVFAVLHLGGWDFHCCIQQFAGRRNYSQIKEKLFTSLQQASIAHVILVMTQLFGDDTFSLQTLFAEERHRIMRLLSQDTLARLDQLYTQAYRDNYGVIMAFHRDELEVPRELQVAAEIALGYRCLTTLKSLEQDITELQLSWNLIGELEAIATEAEHLRCQLNIPDGNQILEQLIVRLLWQLLYTANSKIDADIQRLERLIDVGYKLHLGINLNHSQELYWSCLHSQILPRITSLDSEAETMQCRQLLKLGQKLAVDVSPYLDKLP
>NZ_CP011456.1|WP_053539324.1|3000426_3001518_+|calcium/proton-exchanger
MSIKNIIFSILLLFIPISLAAHFLEWGDLIVFITAALAILPLAAWMGTATEEITVVVGPGIGGFLNATFGNATELIIALVALNAGLIDVVKASITGSIISNLLLVMGLSMLLGGIRYKEQTFESVVARVNASSMNLAVIAILLPTAMNYTSIGISEATVQNLSLAVAIVLILVYGLTLLFSMKTHAYLYEVGIAEIEEDEVTHEKPNVWLWSGVLLVCTLLVAWESELLVDSLEVATSKLGLSALFTGVILVPIIGNAAEHATAVTVAMKNKMDLAMSVAVGSSMQIALFVAPVLVIAGWIVGQPMDLDFNPFELVAVAVSVLIANSISSDGKSNWLEGTLLLAAYTVLGFAFYFHPVTNGMG
>NZ_CP011456.1|WP_053541285.1|3002363_3002900_+|peptidoglycan-binding-protein
MMGVLNPKPLNVPHFLSQKIFPRENGMGLTNDQSNKLAVYHQITPPEFTQIGITSPNHLSILSFRRHKIFEQITQKQMPLSSFKIADAGNIPITKKRGIPVSTRYPRTQNQPMPVISFGSSGISVRALQKLLIANGYGIPIDGVFGPVTETAVRAFQNRRRLSTDGVVGQKTWWELTM
>NZ_CP011456.1|WP_053539325.1|3002944_3003772_-|type-I-methionyl-aminopeptidase
MNIFTNLLSQPAQPKPEKQQRRGIEIKSAREIEIMRQSAKIVATVLKEISELVQPGMTTADLDAYAEKRIREMDATPSFKGYHGFPASICSSINHEVVHGIPSHKKVIRAGDVLKVDTGAYYQGFHGDSCITIAVGSVTSEAARLIKIAEESLYKGIEQVKAGVHLTEIAGAIEDHVKANGFTVVEQFTGHGVGRNLHEEPAVFNYRTREIPNVKLRSGMTLAIEPILNAGSKNTRILADRWTAVTVDNALSAQFEHTVLVTDSGYEILTDRTHL
>NZ_CP011456.1|WP_027403903.1|3003890_3004370_-|hypothetical-protein
MSNFLIQVYYNLPRIICIFSLLISLVIMGVSPATAENLSNNLLKQPAIEITVNLGNSSNELKFEPNHLELISGKRYNLKLSNPSSQKHYFTAKDFADAIWTQKVEAGNVEIKGNIHELELKPGAEAEWVFVPMKPGKYTLRCTIAGHTEAGMKGEIIIK
>NZ_CP011456.1|WP_053539326.1|3004627_3007459_-|insulinase-family-protein
MSFFSIAQRHRFSLFILGIWVIAAFIFHQDAAFSGDKADFSPRLHNFDSEKSHKTLVAKETPNLAITANVRKTVLDNGLTVLTKEVHNAPVVTVQVWYKFGSGQEASGVNGIAHQLEHLMFKGTSNRPIQFGRLFTALGSDSNAFTSYDQTAYYNTAERDKLTALLTLEADRMKNSLIDPQQLASEKRVVISELQGYENSPAYRLNRAVMMSVFPDHPYRLPIGGTKADVEKFTVAQVREYYQKFYSPDNAVLVIAGDFDTSQTLKKVETVFGKIPKRQYSPHKLIIPSPAATPTPVIKLQEPGGNPLLQIIYPLPRINQPDIPALEVMDYILTAGKNSYLYQELVESGLAHDVSANVASLRAGGWYEILVTSVGTQNLTKLDAAVIKALDKLVKISVTKEQVERAKTQLTASVILNNRDITNQAMQLGNDQITTDNYQYTENHLVNIRKVQVSDVINVINKYLQPEARKVGFFEPTKQVATIQSSSYSTPTQENFGTDIAVVPAEVQQYLPPLDILTKAEKRQIPQQLQFANGLRILLLPDKTTPTVTLSGNIKAGTEFESDNQGGLASLVAVNLMNGTKNQDMRTIAKGLEAKGANLNFEAYREGVQIKGSSLAVDLPILLGTLTDVIRNSTFPEKEFVLARQQALTSLDSDLDDADKVANRTFVQSIYPKKHPLHTFPTAESISKIQRRDVIAFKAQHYRPDTTVLAIVGDFDVNKVRSLIQAKLGDWQVQGKPPTVKYPNVGMPKNMINVNPVVPGKPQAITYMGYTGINRQDKRFYAAMILNQILGGDTLSSRLGVEVRDRQGLTYGIYSNFITGKNVGTFLIEMQTSPEDAPKAISSTRNLLKQVHQQGVTPIEVETAKRNLISNYNISLANPEQLSQKMVMNEVYGLNQEELRSYISKIEQVSLNQVNQAARELLHPDKIVVVTAGPPILAHKKIK

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Crispr_ID: NZ_CP011456_24

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011456_24

3000069-3000157

Orphan

Consensus_repeat	Method
TTCAGAAGTATGGCTAACGCCACGCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP011456_24

>merge|NZ_CP011456|24|3000069-3000157|CRISPRCasFinder
TTCAGAAGTATGGCTAACGCCACGCTACGCTACCATGAGGTAGGGGCGCAGGGCCTGCGCCCATTCAGGAGTATGGCTAACGCCACGCT

>NZ_CP011456|24|23|3000069-3000157|CRISPRCasFinder
TTCAGAAGTATGGCTAACGCCACGCT	ACGCTACCATGAGGTAGGGGCGCAGGGCCTGCGCCCA
TTCAGGAGTATGGCTAACGCCACGCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011456.1\|WP_053539315.1\|2975467_2978254_-\|efflux-RND-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|223911
NZ_CP011456.1\|WP_053539325.1\|3002944_3003772_-\|type-I-methionyl-aminopeptidase	unknown	unknown	gnl\|CDD\|237252
NZ_CP011456.1\|WP_053539320.1\|2986021_2987929_+\|squalene--hopene-cyclase	unknown	unknown	gnl\|CDD\|273661
NZ_CP011456.1\|WP_053539316.1\|2978405_2978732_-\|XisI-protein	unknown	unknown	gnl\|CDD\|370165
NZ_CP011456.1\|WP_053539323.1\|2997327_2999979_-\|DUF3536-domain-containing-protein	unknown	unknown	gnl\|CDD\|212109
NZ_CP011456.1\|WP_053539328.1\|3009172_3009676_+\|gamma-carbonic-anhydrase-family-protein	unknown	unknown	gnl\|CDD\|100051
NZ_CP011456.1\|WP_053539324.1\|3000426_3001518_+\|calcium/proton-exchanger	unknown	unknown	gnl\|CDD\|273043
NZ_CP011456.1\|WP_053539327.1\|3007859_3008288_-\|glyoxalase/bleomycin-resistance/dioxygenase-family-protein	unknown	unknown	gnl\|CDD\|366361
NZ_CP011456.1\|WP_027403906.1\|3008417_3008933_-\|TIGR02652-family-protein	unknown	unknown	gnl\|CDD\|370602
NZ_CP011456.1\|WP_053539330.1\|3010103_3011405_+\|bifunctional-folylpolyglutamate-synthase/dihydrofolate-synthase	unknown	unknown	gnl\|CDD\|223362
NZ_CP011456.1\|WP_053539322.1\|2996282_2997041_+\|DUF1868-domain-containing-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053539319.1\|2984698_2985868_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|213815
NZ_CP011456.1\|WP_053539321.1\|2995167_2996154_-\|DNA-polymerase-III-subunit-delta	unknown	unknown	gnl\|CDD\|180982
NZ_CP011456.1\|WP_053541284.1\|2978719_2979136_-\|fatty-acid-oxidation-protein-subunit-alpha	unknown	unknown	gnl\|CDD\|370136
NZ_CP011456.1\|WP_053541285.1\|3002363_3002900_+\|peptidoglycan-binding-protein	unknown	unknown	gnl\|CDD\|366659
NZ_CP011456.1\|WP_053539317.1\|2979217_2979895_+\|phosphorylase	unknown	unknown	gnl\|CDD\|274594
NZ_CP011456.1\|WP_027403903.1\|3003890_3004370_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|259872
NZ_CP011456.1\|WP_053539318.1\|2979987_2983521_-\|DUF4114-domain-containing-protein	unknown	unknown	gnl\|CDD\|379190
NZ_CP011456.1\|WP_053539326.1\|3004627_3007459_-\|insulinase-family-protein	unknown	unknown	gnl\|CDD\|223685
NZ_CP011456.1\|WP_053539329.1\|3009906_3010032_+\|photosystem-II-protein-Y	unknown	unknown	gnl\|CDD\|368833

Protein	Function_ID	Function_description	E-value
NZ_CP011456.1\|WP_053539315.1\|2975467_2978254_-\|efflux-RND-transporter-permease-subunit	gnl\|CDD\|223911	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms].	3.93269e-176
NZ_CP011456.1\|WP_053539325.1\|3002944_3003772_-\|type-I-methionyl-aminopeptidase	gnl\|CDD\|237252	PRK12896, PRK12896, methionine aminopeptidase; Reviewed.	5.26919e-168
NZ_CP011456.1\|WP_053539320.1\|2986021_2987929_+\|squalene--hopene-cyclase	gnl\|CDD\|273661	TIGR01507, squalene-hopene_cyclase, squalene-hopene cyclase. SHC is an essential prokaryotic gene in hopanoid (triterpenoid) biosynthesis. Squalene hopene cyclase, an integral membrane protein, directly cyclizes squalene into hopanoid products. [Fatty acid and phospholipid metabolism, Other].	0
NZ_CP011456.1\|WP_053539327.1\|3007859_3008288_-\|glyoxalase/bleomycin-resistance/dioxygenase-family-protein	gnl\|CDD\|366361	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily.	3.15233e-05
NZ_CP011456.1\|WP_053539318.1\|2979987_2983521_-\|DUF4114-domain-containing-protein	gnl\|CDD\|379190	pfam13448, DUF4114, Domain of unknown function (DUF4114). This is a repeated domain that is found towards the C-terminal of many different types of bacterial proteins. There are highly conserved glutamate and aspartate residues suggesting that this domain might carry enzymic activity.	6.65256e-10
NZ_CP011456.1\|WP_053539328.1\|3009172_3009676_+\|gamma-carbonic-anhydrase-family-protein	gnl\|CDD\|100051	cd04645, LbH_gamma_CA_like, Gamma carbonic anhydrase-like: This family is composed of gamma carbonic anhydrase (CA), Ferripyochelin Binding Protein (FBP), E. coli paaY protein, and similar proteins. CAs are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism, involving the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide, followed by the regeneration of the active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. They are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionary distinct groups - alpha, beta and gamma carbonic anhydrases - which show no significant sequence identity or structural similarity. Gamma CAs are trimeric enzymes with left-handed parallel beta helix (LbH) structural domain.	7.55428e-71
NZ_CP011456.1\|WP_053539324.1\|3000426_3001518_+\|calcium/proton-exchanger	gnl\|CDD\|273043	TIGR00378, cax, calcium/proton exchanger (cax). [Transport and binding proteins, Cations and iron carrying compounds].	5.13703e-133
NZ_CP011456.1\|WP_053539329.1\|3009906_3010032_+\|photosystem-II-protein-Y	gnl\|CDD\|368833	pfam06298, PsbY, Photosystem II protein Y (PsbY). This family consists of several bacterial and plant photosystem II protein Y (PsbY) sequences. PsbY is a manganese-binding protein that has an L-arginine metabolising enzyme activity.	6.33922e-10
NZ_CP011456.1\|WP_027403906.1\|3008417_3008933_-\|TIGR02652-family-protein	gnl\|CDD\|370602	pfam09654, DUF2396, Protein of unknown function (DUF2396). These conserved hypothetical proteins have so far been found only in the Cyanobacteria. They are about 170 amino acids long and contain a CxxCx(14)CxxH motif near the N-terminus.	2.49588e-114
NZ_CP011456.1\|WP_053539330.1\|3010103_3011405_+\|bifunctional-folylpolyglutamate-synthase/dihydrofolate-synthase	gnl\|CDD\|223362	COG0285, FolC, Folylpolyglutamate synthase [Coenzyme metabolism].	8.80266e-162
NZ_CP011456.1\|WP_053539316.1\|2978405_2978732_-\|XisI-protein	gnl\|CDD\|370165	pfam08869, XisI, XisI protein. The fdxN element, along with two other DNA elements, is excised from the chromosome during heterocyst differentiation in cyanobacteria. The xisH as well as the xisF and xisI genes are required.	1.76394e-55
NZ_CP011456.1\|WP_053539319.1\|2984698_2985868_-\|glycosyltransferase	gnl\|CDD\|213815	TIGR03469, HpnB, hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.	0
NZ_CP011456.1\|WP_053539321.1\|2995167_2996154_-\|DNA-polymerase-III-subunit-delta	gnl\|CDD\|180982	PRK07452, PRK07452, DNA polymerase III subunit delta; Validated.	0
NZ_CP011456.1\|WP_053541284.1\|2978719_2979136_-\|fatty-acid-oxidation-protein-subunit-alpha	gnl\|CDD\|370136	pfam08814, XisH, XisH protein. The fdxN element, along with two other DNA elements, is excised from the chromosome during heterocyst differentiation in cyanobacteria. The xisH as well as the xisF and xisI genes are required.	2.79227e-78
NZ_CP011456.1\|WP_053541285.1\|3002363_3002900_+\|peptidoglycan-binding-protein	gnl\|CDD\|366659	pfam01471, PG_binding_1, Putative peptidoglycan binding domain. This domain is composed of three alpha helices. This domain is found at the N or C-terminus of a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. This family is found N-terminal to the catalytic domain of matrixins. The domain is found to bind peptidoglycan experimentally.	3.39879e-17
NZ_CP011456.1\|WP_053539317.1\|2979217_2979895_+\|phosphorylase	gnl\|CDD\|274594	TIGR03468, HpnG, hopanoid-associated phosphorylase. The sequences in this family are members of the pfam01048 family of phosphorylases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. This gene is adjacent to the genes PhnA-E and squalene-hopene cyclase (which would be HpnF) in Zymomonas mobilis and their association with hopene biosynthesis has been noted in the literature. Extending the gene symbol sequence, we suggest the symbol HpnG for the product of this gene. Hopanoids are known to be components of the plasma membrane and to have polar sugar head groups in Z. mobilis and other species.	3.99641e-15
NZ_CP011456.1\|WP_027403903.1\|3003890_3004370_-\|hypothetical-protein	gnl\|CDD\|259872	cd04210, Cupredoxin_like_1, Uncharacterized Cupredoxin-like subfamily. Cupredoxins contain type I copper centers and are involved in inter-molecular electron transfer reactions. Cupredoxins are blue copper proteins because they have an intense blue color due to the presence of a mononuclear type 1 (T1) copper site. Structurally, the cupredoxin-like fold consists of a beta-sandwich with 7 strands in 2 beta-sheets, which is arranged in a Greek-key beta-barrel. Some of these proteins have lost the ability to bind copper. Majority of family members contain multiple cupredoxin domain repeats; ceruloplasmin and coagulation factors V/VIII have six repeats; Laccase, ascorbate oxidase, and spore coat protein A, and multicopper oxidase CueO contain three repeats; and nitrite reductase has two repeats. Others are mono-domain cupredoxins, such as plastocyanin, pseudoazurin, plantacyanin, azurin, rusticyanin, stellacyanin, quinol oxidase and the periplasmic domain of cytochrome c oxidase subunit II.	9.989e-70
NZ_CP011456.1\|WP_053539323.1\|2997327_2999979_-\|DUF3536-domain-containing-protein	gnl\|CDD\|212109	cd10797, GH57N_APU_like_1, N-terminal putative catalytic domain of mainly uncharacterized prokaryotic proteins similar to archaeal thermoactive amylopullulanases; glycoside hydrolase family 57 (GH57). This subfamily of mainly uncharacterized bacterial proteins, shows high sequence homology to GH57 archaeal thermoactive amylopullulanases (APU, E.C 3.2.1.1/41). Thermoactive APUs are type II pullulanases with both pullulanolytic and amylolytic activities. They have an acid pH optimum and the presence of Ca2+ might increase their activity, thermostability, and substrate affinity.	0
NZ_CP011456.1\|WP_053539326.1\|3004627_3007459_-\|insulinase-family-protein	gnl\|CDD\|223685	COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only].	6.2546e-83

>NZ_CP011456.1|WP_053539323.1|2997327_2999979_-|DUF3536-domain-containing-protein
MTLAAEIPSSYDSILPLDQEAKSSPEHDPLKTAQGVYVTVHGHFYQPPRENPYLDAIERQPSASPFHDWNERIHWECYRPNAFARVFNDRGEVVKIVNNYEYMSFNIGPTLMSWLERHDMEVYQRILEADAKSCDRLNGHGNAIAQVYNHIILPLANERDKHTQIRWGKEDFRSRFGREPEGMWLAETAVDYATLEALVAEGIKFIILAPSQAQRCRLIPTGDDSGSQWHEVGGNQIDPTRPYRCYLDSDESAKTSTAYIDIFFYDGPISRDMGFSDVVYNSHHFAGRIGAAIRGDHRQSQLISVATDGETFGHHKKGTEKTLAYAFIGEFPRHGWTVTNFAHYLSLNPPSWEVKLKSVTAWSCAHGVDRWQDDCGCGGEGGVWHQKWRRPLRNALNWLRDQLIDVYEEYGNPLFRDPWQARDEYIYVMGDRTPANIHRFLSHHQTRKLQAAEQVEALRLLEMQRHSLLMFTSCGWFFEEISRPEGTQILRYASRALELAGDVAGVQLEKGFLKRLGLAPSNVEEFKHGAEIYRQLVLTAQIDFKQVASHYAITSLFNHHKNTLPQQQTDKHHHIPHQRVYCYNAHELDYHKQSLGPLTMAVGHLQLVSDITWESENLVFAVLHLGGWDFHCCIQQFAGRRNYSQIKEKLFTSLQQASIAHVILVMTQLFGDDTFSLQTLFAEERHRIMRLLSQDTLARLDQLYTQAYRDNYGVIMAFHRDELEVPRELQVAAEIALGYRCLTTLKSLEQDITELQLSWNLIGELEAIATEAEHLRCQLNIPDGNQILEQLIVRLLWQLLYTANSKIDADIQRLERLIDVGYKLHLGINLNHSQELYWSCLHSQILPRITSLDSEAETMQCRQLLKLGQKLAVDVSPYLDKLP
>NZ_CP011456.1|WP_053539322.1|2996282_2997041_+|DUF1868-domain-containing-protein
MTLPEAYKTQIQHIQESSKFRVHAGVREATPFPGYTLITPPAQEDANNAAFYSKIQAYQQQLLKLPIASDLIVPVPPASFHVTVADLIWDSAFHHACAKNPQFAEDLNSQLAERFQEYQKLMTKGSPISWQMLGLIVMPRAVGMCLVPKDKRSYEEIIQFRRIIYQNRTLMGLGIEQHYHFTAHVTLGYFGEIPPELNRVNLTTMFCEFNQSLPLDTPDFLIDQVELRKFDNMTHYYRQPDWPSVNFKSMGV
>NZ_CP011456.1|WP_053539321.1|2995167_2996154_-|DNA-polymerase-III-subunit-delta
MPIYVYWGEDDFAMEKAVVTLRDRILDPLWTSFNYTSFPPDQPDPIIQALNQAMTPPFGAGGRFVWLINTTLGQNCPDHILAELQRTLKVIPPDSTLLLTSRNKPDERLKSTKLLKQFATISEFSLIPPWKTELLVQSVQQVAQTIGLKISPLVAELLAESVGNDTRLLYNELEKLRLYTEGSGKPLDVNTVSELVRNTTQNTLQLATAIRTGDTPKALGILGDLSNAAEPGLRIVATLIGQFRTWLLVKMMMDSGERNPQAIAQGAEISNPKRIYFLQQEVKSLPLQQLISALPLLLELEVSLKQGASETSTLQTKVIELCQICRRT
>NZ_CP011456.1|WP_053539320.1|2986021_2987929_+|squalene--hopene-cyclase
MQTQDRIKVKQVVDAIAASQKHLLSIQNPDGYWWAELESNVTITSEAVLLHKIWGTEKTRPLHKVENYLRSQQREHGGWELFYGDGGDLNTTVEAYMALRLLGVPATDTALLKAKSLILAKGGISKTRIFTKLHLALIGCYNWRGLPSLPPWVMLLPDNFFFNIYELSSWARSSTVPLLIVFDRKPIFNIDQPINLDELYAECIENVVWQLPKNGDWSDIFNILDDGFKLAESINFVPFRNEGIKAAEKWILERQEVTGDWGGIIPAMLNSLLALKCLDYDANDPVIERGLKAVDNFAIETENSYCVQPCVSPVWDTAWAIRALIDSGFAPNDPAIVKAGEWLIEKQILDYGDWNVKNKQGKPGAWAFEFENRFYPDVDDSAVVVMALHQAKLPNEELKKQAIDRALNWIATMQCKPGGWAAFDLNNDQEWLNSVPYGDLKAMIDPNTADVTARVLEMLGACNLSIQPDNLEKSLDYLLKEQEIEGCWFGRWGVNYIYGTSGVLSALALINPLKYARDINQGAAWLVKVQNSDGGWGETCFSYNDPSLKGKGDSTASQTAWALIGLIAAGEATGKLALDSIEKGINYLLETQKSDGTWDEIYFTGTGFPCHFYLKYHLYQQYFPLMALGRYQAIR
>NZ_CP011456.1|WP_053539319.1|2984698_2985868_-|glycosyltransferase
MATIIFSLTLLSLVIWIFLLLFWGQFWRVNHQLEANKDKDIDNNILPTVCVIIPARNEADVIPVSLRSLLLQDYPGKFTIFLVDDQSSDGTANFAQGVAHALDKTPQLQIISSPPLPPGWTGKLWAMEQGVQTASQLKPDYFLLTDADIEHHPSNLRRLVAKAEAQKLDLVSIMVRLRCQSFWEQLLIPAFVFFFQKLYPFSWVNNPKKAIAAAAGGCILIQKEALNRIGGLQVIRQALIDDCSLAKAVKSTKGKIWLGLSTLTRSLRPYDSLKTIWDMVARSAYTQLNYSPFLLLGSLLGMILVYIVPPIGIILGLVFGNWIITLTSVIGYLLMTFAYFPITRFYKCSPAFAFSLPIIAFMYTCMTLDSALQHWQGLGGAWKGRVYAK
>NZ_CP011456.1|WP_053539318.1|2979987_2983521_-|DUF4114-domain-containing-protein
MEPLTTTEDSSNPSIEPYPIATTTEDSSNPSIEPYPIATTTEDSSNPSIEPYPIATTTEDSSNPSIEPYPIATTTEDSSNPSIEPYPIATTTEDSSNPSIEPDPIATTTGVSSNPSTEPDPNPIATTTGVSSNPSTEPDPNPIATTTGVSSNPSIITSENSPVEEIPFEAALPDSNSSSDNEEVFLIGIDPVTGETIVIDPVSGEIIPTSTPISNNNGFTIKGVSSDEFGYSVGAVDINGDGIEDIVIGSPSSDPNNKSNAGKTYVVFGERDSLNRTIDVSSLDNTKGFVINGAKAGDKSGYSVRNIGDINGDGVDDLAIGAPGANGNSLGSAYVIFGSNDPNYFNSPIELSNLGSKGFNIQGSGFSSNAGWSVSAAGDINGDGIKELLIGATNPGDNGSGTIGESYAIFGKENFDSTLNLDDPNFGLDDGLIIYSYNPDNPSDDNNSLGYSVSDAGDINGDGIDDLIIGAPYANPNGNNSGSSYVIYGRSNDNPFTDDINIANLSSSDGFVINGQDADQSGLSVSKAGDINGDRIGDLIIGAKGKGYVVFGKQDFGSSINLSDLNGSNGFTINGISTLDNSDWYVSGAGNINDDDIDDIIIGAKNANNNVGQVYVIYGTEEDFAPTFELSSLESPDSQNGFIIDGASIGDKLGSSISNGDFDGDGVNDLIIGAPGSGKVYVRLGTGTDTDTGTDTGTDAGTDTGTDTGTDTGTDTGTDTGTDTGTDTGTDTGTDTGTDAGTDTGTDAGTDTGTDTGTDTGTDTGTDTGTDTGTDTGTDTGTDTGTDTGTDTGTDTGTDTGTDTGTDTGTDTGTDTGTDTGTDTGTDTETVNVNDFLSLISDNVFNIKDNDGKVTLEVKLTGFNFNGFYEIGVFTVDDASGKIDGIVPGEPGYAEKALAKGQIIFSTITNLPAGFDLTSLGRLLEFNSNDNLRFYLVKDGSTDSVLNKNTPIGNVLFANPSTVKITDLGSNSFSLNWEDGSGNPSGFDDLQVQIQANDKSMPLGTALQSKPQGESLDLRGITSAVTADFTVYREASYNNFVGFYRVTDGNGGIDTSGDGIADILPGQDGYVQAALNGRVSDVSLNVNNGGTAGFNTTLQGGAMYVPFLVANGTLDALLDRNPNNNPDIYFAFLGANSDGVDHVRMLGDNTFGFEDLRGGGDKDFNDVIVKVNLAPVV
>NZ_CP011456.1|WP_053539317.1|2979217_2979895_+|phosphorylase
MSTLILVPQGAEYQAVCRGLRRVPNSQTKVLAIPMGIEPVRKYLQQFTHNQANRMLMMGLCGSLSQKYQIGDIVLYQNCLYQGNLQEGDNSFTADIHNKLGDHVSLVKGLTSDRLLYKATQKRELHEQSGADVVDMEGYAFLEFFQQPSDAVSPPVQVAILRVVSDDAHHDIPNITSAIGADGSLQPLPLAWELIRQPPAATRLITGSLKGLKALTTVTQLLFTA
>NZ_CP011456.1|WP_053541284.1|2978719_2979136_-|fatty-acid-oxidation-protein-subunit-alpha
MSAKDIFHESVRKALEKEQWLITDDPLKFKFGDVNFQVDLAAQKLLGAEKAGEKIAVEIKSFLNPSAITDFYAALGQFLSYRLALETIEPNRILYLAIPLDAYEIFFQLEFTQIALQRYQVPLVVYEPRKEVIFKWIK
>NZ_CP011456.1|WP_053539316.1|2978405_2978732_-|XisI-protein
MDKIAKYREYIQTLLTNYAKDDDEEELQLIFDTQRDHYQWMNVGWQELHRVYRSVMHFDIKDGKIWLQQNLTDQNPAEELVKMGVPKEDIVLGLHPPYKRPYTDYGVA
>NZ_CP011456.1|WP_053539315.1|2975467_2978254_-|efflux-RND-transporter-permease-subunit
MVQTNTQSTRESFNISKLAIKFSWLTVCFWIGIAVAGILAFSSLKYALFPDITFPVVVVNAQAPLTSALDTEEQLTKPLEASLKSLAGLEDIRSSTYPGQTAVISSFVVGTNLETATKKISQIVNQLNLPKNATKKIIPLNLNESAAVSYAIESTAGKIDNLQQIAKAKIVPAIAKLPGVLKVSLLGDGNTRSQERRGAGPAPVSPISQEEERRRNVLLPSSGTLVRFNGKQALAFQVIKKGNANTLEVVSRVEKEVQQLRLSLKDVTLTLAATQAEYIHNATHSTIDALIEAIVLSVVVIFPFLWNWQATLISALAIPVSLLGTFIVMAIYGFNLETITLLALALVIGSIVDDAIVDVENIMRHIEEGKTPREAALIATNEIGLTVTAATLTAVAVFLPIGLMGGVIGQFFKPFGITVSAAMLTSLLVARTLSPVLAIYWLKAKSSSSPQKQSKIWLEFDQAYRNLLAWSLQHRLIVVGLAVGSLIAGLALIPLIPKGFIPKLDRGEFNIVYTAPLPNLPGNLGQAGQGGRQQPGGQPGQAGQKDKLENSSLSAAALAASSSSIPIPNPLNDSLDVAKKLEEVVRKSPAVATVFTTVGSREGEPNKGTLYIKLKTDSEVKTAEVQDQLRAALPKLAGVTTSVEDIQFVDTGGQKPLQIALQGNDLQALTTAAKAVKARIEKISGFADITITGASDQQDPILQIERLNNQRVAYIGANLGQNLTLGDATDKVVAEAKAVIPAGVSLNLGGDSARQNEVFGSFGTTLGLSALCIIVVLIWLFKSWVDPIVIGLSLPLAIVGALLALLFTKSDFGMISLIGFVFLLGITNKNAILIVDYINQLRDSGLERTEAILKAGPVRLRPIMMTTAATILGMVPIALGLGAGSELRSPMAVSIAGGLVSSTILSLFVVPVFYAILDDWFPRKKIKQ
>NZ_CP011456.1|WP_053539324.1|3000426_3001518_+|calcium/proton-exchanger
MSIKNIIFSILLLFIPISLAAHFLEWGDLIVFITAALAILPLAAWMGTATEEITVVVGPGIGGFLNATFGNATELIIALVALNAGLIDVVKASITGSIISNLLLVMGLSMLLGGIRYKEQTFESVVARVNASSMNLAVIAILLPTAMNYTSIGISEATVQNLSLAVAIVLILVYGLTLLFSMKTHAYLYEVGIAEIEEDEVTHEKPNVWLWSGVLLVCTLLVAWESELLVDSLEVATSKLGLSALFTGVILVPIIGNAAEHATAVTVAMKNKMDLAMSVAVGSSMQIALFVAPVLVIAGWIVGQPMDLDFNPFELVAVAVSVLIANSISSDGKSNWLEGTLLLAAYTVLGFAFYFHPVTNGMG
>NZ_CP011456.1|WP_053541285.1|3002363_3002900_+|peptidoglycan-binding-protein
MMGVLNPKPLNVPHFLSQKIFPRENGMGLTNDQSNKLAVYHQITPPEFTQIGITSPNHLSILSFRRHKIFEQITQKQMPLSSFKIADAGNIPITKKRGIPVSTRYPRTQNQPMPVISFGSSGISVRALQKLLIANGYGIPIDGVFGPVTETAVRAFQNRRRLSTDGVVGQKTWWELTM
>NZ_CP011456.1|WP_053539325.1|3002944_3003772_-|type-I-methionyl-aminopeptidase
MNIFTNLLSQPAQPKPEKQQRRGIEIKSAREIEIMRQSAKIVATVLKEISELVQPGMTTADLDAYAEKRIREMDATPSFKGYHGFPASICSSINHEVVHGIPSHKKVIRAGDVLKVDTGAYYQGFHGDSCITIAVGSVTSEAARLIKIAEESLYKGIEQVKAGVHLTEIAGAIEDHVKANGFTVVEQFTGHGVGRNLHEEPAVFNYRTREIPNVKLRSGMTLAIEPILNAGSKNTRILADRWTAVTVDNALSAQFEHTVLVTDSGYEILTDRTHL
>NZ_CP011456.1|WP_027403903.1|3003890_3004370_-|hypothetical-protein
MSNFLIQVYYNLPRIICIFSLLISLVIMGVSPATAENLSNNLLKQPAIEITVNLGNSSNELKFEPNHLELISGKRYNLKLSNPSSQKHYFTAKDFADAIWTQKVEAGNVEIKGNIHELELKPGAEAEWVFVPMKPGKYTLRCTIAGHTEAGMKGEIIIK
>NZ_CP011456.1|WP_053539326.1|3004627_3007459_-|insulinase-family-protein
MSFFSIAQRHRFSLFILGIWVIAAFIFHQDAAFSGDKADFSPRLHNFDSEKSHKTLVAKETPNLAITANVRKTVLDNGLTVLTKEVHNAPVVTVQVWYKFGSGQEASGVNGIAHQLEHLMFKGTSNRPIQFGRLFTALGSDSNAFTSYDQTAYYNTAERDKLTALLTLEADRMKNSLIDPQQLASEKRVVISELQGYENSPAYRLNRAVMMSVFPDHPYRLPIGGTKADVEKFTVAQVREYYQKFYSPDNAVLVIAGDFDTSQTLKKVETVFGKIPKRQYSPHKLIIPSPAATPTPVIKLQEPGGNPLLQIIYPLPRINQPDIPALEVMDYILTAGKNSYLYQELVESGLAHDVSANVASLRAGGWYEILVTSVGTQNLTKLDAAVIKALDKLVKISVTKEQVERAKTQLTASVILNNRDITNQAMQLGNDQITTDNYQYTENHLVNIRKVQVSDVINVINKYLQPEARKVGFFEPTKQVATIQSSSYSTPTQENFGTDIAVVPAEVQQYLPPLDILTKAEKRQIPQQLQFANGLRILLLPDKTTPTVTLSGNIKAGTEFESDNQGGLASLVAVNLMNGTKNQDMRTIAKGLEAKGANLNFEAYREGVQIKGSSLAVDLPILLGTLTDVIRNSTFPEKEFVLARQQALTSLDSDLDDADKVANRTFVQSIYPKKHPLHTFPTAESISKIQRRDVIAFKAQHYRPDTTVLAIVGDFDVNKVRSLIQAKLGDWQVQGKPPTVKYPNVGMPKNMINVNPVVPGKPQAITYMGYTGINRQDKRFYAAMILNQILGGDTLSSRLGVEVRDRQGLTYGIYSNFITGKNVGTFLIEMQTSPEDAPKAISSTRNLLKQVHQQGVTPIEVETAKRNLISNYNISLANPEQLSQKMVMNEVYGLNQEELRSYISKIEQVSLNQVNQAARELLHPDKIVVVTAGPPILAHKKIK
>NZ_CP011456.1|WP_053539327.1|3007859_3008288_-|glyoxalase/bleomycin-resistance/dioxygenase-family-protein
MHHASIRTANIHLAIAFYEQLGFKVGDRFTTGYTLACWMEGLGTRIELIQIPQPKPAPDAFNDEHYVGYYHLAFDVTQITSDLPTWLESLRIRLATIEYLPPLKILLEPTQQQIGDNILEVAFIADFDGLPLEFLRFLHKST
>NZ_CP011456.1|WP_027403906.1|3008417_3008933_-|TIGR02652-family-protein
MINPGFQYPIFGPEIQCPHCRQTISALTLTDTYLCPRHGAFEAEPKTGELVHLQSGRHWRRWDGEWYRQHTHPDGIRFEIHEALDKLYTQGYRATRIIVANRYQELMSGYLERSTPWRSGQGEVATGARLYGLPVEFSPDSAAEPCWEVINFDLDKEPGVPVRYPYFRLFE
>NZ_CP011456.1|WP_053539328.1|3009172_3009676_+|gamma-carbonic-anhydrase-family-protein
MSISSVWKSPEFSQAAFVAANAIIIGSVTIAAKASIWYGSVVRGDVERIEIGECTNIQDGAILHGDPGVPTILEDHVTVGHRAVVHSAHIERGCLIGIGAIVLNGVRVGTGSIIGAGAVVTKNVPPGSLVMGIPGKVVRQLTDTEITELIEHAEKYHQLALLHAANG
>NZ_CP011456.1|WP_053539329.1|3009906_3010032_+|photosystem-II-protein-Y
MDLDNRVLIVLAPVAIAAGWAAFNIGAAAIRQIQNFLSKEA
>NZ_CP011456.1|WP_053539330.1|3010103_3011405_+|bifunctional-folylpolyglutamate-synthase/dihydrofolate-synthase
MNVDSLLQPFQHFGVNLGLSRIVNLLATLGNPHHQVPIIHVAGTNGKGSVCAYLSAVLTEAGYKTGRYTSPHLIDWTERICINEYPIDSNNLCELILQVQAAINPEEESPTQFEVITAAAWLYFAQQKVDIAVIEVGLGGRLDATNVCNNPLVTVITSISREHWQQLGPTVAHIAREKAGIIKPGCPVVVGSLPEAAENVVKSRILELECPIFTPQPSDQINQNWAEYQKISSPETIKYPLPLQGKIQLHNSALALAALEILQTQNWQISEKAMINGMAKTKWPGRMQWTTWKSHKLLIDGAHNPASATVLRDYVDTLNIKNITWVMGMLATKDHGEIFQELLKAGDKLYLVPVPDSNSADLTALTKLATSICPDLKFCHIYQDVFSALETAFSATDNQVVLCGSLYLIGHFLASLSDSALSDKINHPENPDL

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Crispr_ID: NZ_CP011456_25

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011456_25

3007681-3007804

Orphan

Consensus_repeat	Method
GAGTATGGCTAACGCCACGCTGCGCTATCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP011456_25

>merge|NZ_CP011456|25|3007681-3007804|CRISPRCasFinder
GAGTATGGCTAACGCCACGCTGCGCTATCAAGAGTATGGCTAACGCCACGCTGCGCTATCAAGAGGTAGGGGCGCAGGGCTTGCGCCCATTCAGGAGTATGGCTAACGCCACGCTGCGTTATCA

>NZ_CP011456|25|24|3007681-3007804|CRISPRCasFinder
GAGTATGGCTAACGCCACGCTGCGCTATCA	AGAGTATGGCTAACGCCACGCTGCGCTATCAAGAGGTAGGGGCGCAGGGCTTGCGCCCATTCAG
GAGTATGGCTAACGCCACGCTGCGTTATCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011456.1\|WP_081424366.1\|3012998_3013220_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053539325.1\|3002944_3003772_-\|type-I-methionyl-aminopeptidase	unknown	unknown	gnl\|CDD\|237252
NZ_CP011456.1\|WP_053539329.1\|3009906_3010032_+\|photosystem-II-protein-Y	unknown	unknown	gnl\|CDD\|368833
NZ_CP011456.1\|WP_053539327.1\|3007859_3008288_-\|glyoxalase/bleomycin-resistance/dioxygenase-family-protein	unknown	unknown	gnl\|CDD\|366361
NZ_CP011456.1\|WP_039201367.1\|3014508_3015309_+\|fimbrial-protein	unknown	unknown	gnl\|CDD\|225707
NZ_CP011456.1\|WP_053539326.1\|3004627_3007459_-\|insulinase-family-protein	unknown	unknown	gnl\|CDD\|223685
NZ_CP011456.1\|WP_053539328.1\|3009172_3009676_+\|gamma-carbonic-anhydrase-family-protein	unknown	unknown	gnl\|CDD\|100051
NZ_CP011456.1\|WP_053539324.1\|3000426_3001518_+\|calcium/proton-exchanger	unknown	unknown	gnl\|CDD\|273043
NZ_CP011456.1\|WP_053539332.1\|3015305_3016067_+\|pilus-assembly-protein-PilO	unknown	unknown	unknown
NZ_CP011456.1\|WP_053539330.1\|3010103_3011405_+\|bifunctional-folylpolyglutamate-synthase/dihydrofolate-synthase	unknown	unknown	gnl\|CDD\|223362
NZ_CP011456.1\|WP_053539322.1\|2996282_2997041_+\|DUF1868-domain-containing-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053539319.1\|2984698_2985868_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|213815
NZ_CP011456.1\|WP_053539321.1\|2995167_2996154_-\|DNA-polymerase-III-subunit-delta	unknown	unknown	gnl\|CDD\|180982
NZ_CP011456.1\|WP_053539331.1\|3013397_3014504_+\|pilus-assembly-protein-PilM	unknown	unknown	gnl\|CDD\|227306
NZ_CP011456.1\|WP_053539320.1\|2986021_2987929_+\|squalene--hopene-cyclase	unknown	unknown	gnl\|CDD\|273661
NZ_CP011456.1\|WP_053541285.1\|3002363_3002900_+\|peptidoglycan-binding-protein	unknown	unknown	gnl\|CDD\|366659
NZ_CP011456.1\|WP_027403903.1\|3003890_3004370_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|259872
NZ_CP011456.1\|WP_039201368.1\|3011630_3012929_-\|sugar-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270303
NZ_CP011456.1\|WP_053539323.1\|2997327_2999979_-\|DUF3536-domain-containing-protein	unknown	unknown	gnl\|CDD\|212109
NZ_CP011456.1\|WP_027403906.1\|3008417_3008933_-\|TIGR02652-family-protein	unknown	unknown	gnl\|CDD\|370602

Protein	Function_ID	Function_description	E-value
NZ_CP011456.1\|WP_053539325.1\|3002944_3003772_-\|type-I-methionyl-aminopeptidase	gnl\|CDD\|237252	PRK12896, PRK12896, methionine aminopeptidase; Reviewed.	5.26919e-168
NZ_CP011456.1\|WP_053539329.1\|3009906_3010032_+\|photosystem-II-protein-Y	gnl\|CDD\|368833	pfam06298, PsbY, Photosystem II protein Y (PsbY). This family consists of several bacterial and plant photosystem II protein Y (PsbY) sequences. PsbY is a manganese-binding protein that has an L-arginine metabolising enzyme activity.	6.33922e-10
NZ_CP011456.1\|WP_053539327.1\|3007859_3008288_-\|glyoxalase/bleomycin-resistance/dioxygenase-family-protein	gnl\|CDD\|366361	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily.	3.15233e-05
NZ_CP011456.1\|WP_053539326.1\|3004627_3007459_-\|insulinase-family-protein	gnl\|CDD\|223685	COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only].	6.2546e-83
NZ_CP011456.1\|WP_053539328.1\|3009172_3009676_+\|gamma-carbonic-anhydrase-family-protein	gnl\|CDD\|100051	cd04645, LbH_gamma_CA_like, Gamma carbonic anhydrase-like: This family is composed of gamma carbonic anhydrase (CA), Ferripyochelin Binding Protein (FBP), E. coli paaY protein, and similar proteins. CAs are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism, involving the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide, followed by the regeneration of the active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. They are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionary distinct groups - alpha, beta and gamma carbonic anhydrases - which show no significant sequence identity or structural similarity. Gamma CAs are trimeric enzymes with left-handed parallel beta helix (LbH) structural domain.	7.55428e-71
NZ_CP011456.1\|WP_053539324.1\|3000426_3001518_+\|calcium/proton-exchanger	gnl\|CDD\|273043	TIGR00378, cax, calcium/proton exchanger (cax). [Transport and binding proteins, Cations and iron carrying compounds].	5.13703e-133
NZ_CP011456.1\|WP_053539330.1\|3010103_3011405_+\|bifunctional-folylpolyglutamate-synthase/dihydrofolate-synthase	gnl\|CDD\|223362	COG0285, FolC, Folylpolyglutamate synthase [Coenzyme metabolism].	8.80266e-162
NZ_CP011456.1\|WP_027403903.1\|3003890_3004370_-\|hypothetical-protein	gnl\|CDD\|259872	cd04210, Cupredoxin_like_1, Uncharacterized Cupredoxin-like subfamily. Cupredoxins contain type I copper centers and are involved in inter-molecular electron transfer reactions. Cupredoxins are blue copper proteins because they have an intense blue color due to the presence of a mononuclear type 1 (T1) copper site. Structurally, the cupredoxin-like fold consists of a beta-sandwich with 7 strands in 2 beta-sheets, which is arranged in a Greek-key beta-barrel. Some of these proteins have lost the ability to bind copper. Majority of family members contain multiple cupredoxin domain repeats; ceruloplasmin and coagulation factors V/VIII have six repeats; Laccase, ascorbate oxidase, and spore coat protein A, and multicopper oxidase CueO contain three repeats; and nitrite reductase has two repeats. Others are mono-domain cupredoxins, such as plastocyanin, pseudoazurin, plantacyanin, azurin, rusticyanin, stellacyanin, quinol oxidase and the periplasmic domain of cytochrome c oxidase subunit II.	9.989e-70
NZ_CP011456.1\|WP_053539319.1\|2984698_2985868_-\|glycosyltransferase	gnl\|CDD\|213815	TIGR03469, HpnB, hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.	0
NZ_CP011456.1\|WP_039201367.1\|3014508_3015309_+\|fimbrial-protein	gnl\|CDD\|225707	COG3166, PilN, Tfp pilus assembly protein PilN [Cell motility and secretion / Intracellular trafficking and secretion].	1.32356e-21
NZ_CP011456.1\|WP_053539331.1\|3013397_3014504_+\|pilus-assembly-protein-PilM	gnl\|CDD\|227306	COG4972, PilM, Tfp pilus assembly protein, ATPase PilM [Cell motility and secretion / Intracellular trafficking and secretion].	3.27008e-133
NZ_CP011456.1\|WP_053539320.1\|2986021_2987929_+\|squalene--hopene-cyclase	gnl\|CDD\|273661	TIGR01507, squalene-hopene_cyclase, squalene-hopene cyclase. SHC is an essential prokaryotic gene in hopanoid (triterpenoid) biosynthesis. Squalene hopene cyclase, an integral membrane protein, directly cyclizes squalene into hopanoid products. [Fatty acid and phospholipid metabolism, Other].	0
NZ_CP011456.1\|WP_053541285.1\|3002363_3002900_+\|peptidoglycan-binding-protein	gnl\|CDD\|366659	pfam01471, PG_binding_1, Putative peptidoglycan binding domain. This domain is composed of three alpha helices. This domain is found at the N or C-terminus of a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. This family is found N-terminal to the catalytic domain of matrixins. The domain is found to bind peptidoglycan experimentally.	3.39879e-17
NZ_CP011456.1\|WP_053539321.1\|2995167_2996154_-\|DNA-polymerase-III-subunit-delta	gnl\|CDD\|180982	PRK07452, PRK07452, DNA polymerase III subunit delta; Validated.	0
NZ_CP011456.1\|WP_039201368.1\|3011630_3012929_-\|sugar-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270303	cd13585, PBP2_TMBP_like, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold. This family includes the periplasmic trehalose/maltose-binding component of an ABC transport system and related proteins from archaea and bacteria. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.88602e-77
NZ_CP011456.1\|WP_053539323.1\|2997327_2999979_-\|DUF3536-domain-containing-protein	gnl\|CDD\|212109	cd10797, GH57N_APU_like_1, N-terminal putative catalytic domain of mainly uncharacterized prokaryotic proteins similar to archaeal thermoactive amylopullulanases; glycoside hydrolase family 57 (GH57). This subfamily of mainly uncharacterized bacterial proteins, shows high sequence homology to GH57 archaeal thermoactive amylopullulanases (APU, E.C 3.2.1.1/41). Thermoactive APUs are type II pullulanases with both pullulanolytic and amylolytic activities. They have an acid pH optimum and the presence of Ca2+ might increase their activity, thermostability, and substrate affinity.	0
NZ_CP011456.1\|WP_027403906.1\|3008417_3008933_-\|TIGR02652-family-protein	gnl\|CDD\|370602	pfam09654, DUF2396, Protein of unknown function (DUF2396). These conserved hypothetical proteins have so far been found only in the Cyanobacteria. They are about 170 amino acids long and contain a CxxCx(14)CxxH motif near the N-terminus.	2.49588e-114

>NZ_CP011456.1|WP_053539326.1|3004627_3007459_-|insulinase-family-protein
MSFFSIAQRHRFSLFILGIWVIAAFIFHQDAAFSGDKADFSPRLHNFDSEKSHKTLVAKETPNLAITANVRKTVLDNGLTVLTKEVHNAPVVTVQVWYKFGSGQEASGVNGIAHQLEHLMFKGTSNRPIQFGRLFTALGSDSNAFTSYDQTAYYNTAERDKLTALLTLEADRMKNSLIDPQQLASEKRVVISELQGYENSPAYRLNRAVMMSVFPDHPYRLPIGGTKADVEKFTVAQVREYYQKFYSPDNAVLVIAGDFDTSQTLKKVETVFGKIPKRQYSPHKLIIPSPAATPTPVIKLQEPGGNPLLQIIYPLPRINQPDIPALEVMDYILTAGKNSYLYQELVESGLAHDVSANVASLRAGGWYEILVTSVGTQNLTKLDAAVIKALDKLVKISVTKEQVERAKTQLTASVILNNRDITNQAMQLGNDQITTDNYQYTENHLVNIRKVQVSDVINVINKYLQPEARKVGFFEPTKQVATIQSSSYSTPTQENFGTDIAVVPAEVQQYLPPLDILTKAEKRQIPQQLQFANGLRILLLPDKTTPTVTLSGNIKAGTEFESDNQGGLASLVAVNLMNGTKNQDMRTIAKGLEAKGANLNFEAYREGVQIKGSSLAVDLPILLGTLTDVIRNSTFPEKEFVLARQQALTSLDSDLDDADKVANRTFVQSIYPKKHPLHTFPTAESISKIQRRDVIAFKAQHYRPDTTVLAIVGDFDVNKVRSLIQAKLGDWQVQGKPPTVKYPNVGMPKNMINVNPVVPGKPQAITYMGYTGINRQDKRFYAAMILNQILGGDTLSSRLGVEVRDRQGLTYGIYSNFITGKNVGTFLIEMQTSPEDAPKAISSTRNLLKQVHQQGVTPIEVETAKRNLISNYNISLANPEQLSQKMVMNEVYGLNQEELRSYISKIEQVSLNQVNQAARELLHPDKIVVVTAGPPILAHKKIK
>NZ_CP011456.1|WP_027403903.1|3003890_3004370_-|hypothetical-protein
MSNFLIQVYYNLPRIICIFSLLISLVIMGVSPATAENLSNNLLKQPAIEITVNLGNSSNELKFEPNHLELISGKRYNLKLSNPSSQKHYFTAKDFADAIWTQKVEAGNVEIKGNIHELELKPGAEAEWVFVPMKPGKYTLRCTIAGHTEAGMKGEIIIK
>NZ_CP011456.1|WP_053539325.1|3002944_3003772_-|type-I-methionyl-aminopeptidase
MNIFTNLLSQPAQPKPEKQQRRGIEIKSAREIEIMRQSAKIVATVLKEISELVQPGMTTADLDAYAEKRIREMDATPSFKGYHGFPASICSSINHEVVHGIPSHKKVIRAGDVLKVDTGAYYQGFHGDSCITIAVGSVTSEAARLIKIAEESLYKGIEQVKAGVHLTEIAGAIEDHVKANGFTVVEQFTGHGVGRNLHEEPAVFNYRTREIPNVKLRSGMTLAIEPILNAGSKNTRILADRWTAVTVDNALSAQFEHTVLVTDSGYEILTDRTHL
>NZ_CP011456.1|WP_053541285.1|3002363_3002900_+|peptidoglycan-binding-protein
MMGVLNPKPLNVPHFLSQKIFPRENGMGLTNDQSNKLAVYHQITPPEFTQIGITSPNHLSILSFRRHKIFEQITQKQMPLSSFKIADAGNIPITKKRGIPVSTRYPRTQNQPMPVISFGSSGISVRALQKLLIANGYGIPIDGVFGPVTETAVRAFQNRRRLSTDGVVGQKTWWELTM
>NZ_CP011456.1|WP_053539324.1|3000426_3001518_+|calcium/proton-exchanger
MSIKNIIFSILLLFIPISLAAHFLEWGDLIVFITAALAILPLAAWMGTATEEITVVVGPGIGGFLNATFGNATELIIALVALNAGLIDVVKASITGSIISNLLLVMGLSMLLGGIRYKEQTFESVVARVNASSMNLAVIAILLPTAMNYTSIGISEATVQNLSLAVAIVLILVYGLTLLFSMKTHAYLYEVGIAEIEEDEVTHEKPNVWLWSGVLLVCTLLVAWESELLVDSLEVATSKLGLSALFTGVILVPIIGNAAEHATAVTVAMKNKMDLAMSVAVGSSMQIALFVAPVLVIAGWIVGQPMDLDFNPFELVAVAVSVLIANSISSDGKSNWLEGTLLLAAYTVLGFAFYFHPVTNGMG
>NZ_CP011456.1|WP_053539323.1|2997327_2999979_-|DUF3536-domain-containing-protein
MTLAAEIPSSYDSILPLDQEAKSSPEHDPLKTAQGVYVTVHGHFYQPPRENPYLDAIERQPSASPFHDWNERIHWECYRPNAFARVFNDRGEVVKIVNNYEYMSFNIGPTLMSWLERHDMEVYQRILEADAKSCDRLNGHGNAIAQVYNHIILPLANERDKHTQIRWGKEDFRSRFGREPEGMWLAETAVDYATLEALVAEGIKFIILAPSQAQRCRLIPTGDDSGSQWHEVGGNQIDPTRPYRCYLDSDESAKTSTAYIDIFFYDGPISRDMGFSDVVYNSHHFAGRIGAAIRGDHRQSQLISVATDGETFGHHKKGTEKTLAYAFIGEFPRHGWTVTNFAHYLSLNPPSWEVKLKSVTAWSCAHGVDRWQDDCGCGGEGGVWHQKWRRPLRNALNWLRDQLIDVYEEYGNPLFRDPWQARDEYIYVMGDRTPANIHRFLSHHQTRKLQAAEQVEALRLLEMQRHSLLMFTSCGWFFEEISRPEGTQILRYASRALELAGDVAGVQLEKGFLKRLGLAPSNVEEFKHGAEIYRQLVLTAQIDFKQVASHYAITSLFNHHKNTLPQQQTDKHHHIPHQRVYCYNAHELDYHKQSLGPLTMAVGHLQLVSDITWESENLVFAVLHLGGWDFHCCIQQFAGRRNYSQIKEKLFTSLQQASIAHVILVMTQLFGDDTFSLQTLFAEERHRIMRLLSQDTLARLDQLYTQAYRDNYGVIMAFHRDELEVPRELQVAAEIALGYRCLTTLKSLEQDITELQLSWNLIGELEAIATEAEHLRCQLNIPDGNQILEQLIVRLLWQLLYTANSKIDADIQRLERLIDVGYKLHLGINLNHSQELYWSCLHSQILPRITSLDSEAETMQCRQLLKLGQKLAVDVSPYLDKLP
>NZ_CP011456.1|WP_053539322.1|2996282_2997041_+|DUF1868-domain-containing-protein
MTLPEAYKTQIQHIQESSKFRVHAGVREATPFPGYTLITPPAQEDANNAAFYSKIQAYQQQLLKLPIASDLIVPVPPASFHVTVADLIWDSAFHHACAKNPQFAEDLNSQLAERFQEYQKLMTKGSPISWQMLGLIVMPRAVGMCLVPKDKRSYEEIIQFRRIIYQNRTLMGLGIEQHYHFTAHVTLGYFGEIPPELNRVNLTTMFCEFNQSLPLDTPDFLIDQVELRKFDNMTHYYRQPDWPSVNFKSMGV
>NZ_CP011456.1|WP_053539321.1|2995167_2996154_-|DNA-polymerase-III-subunit-delta
MPIYVYWGEDDFAMEKAVVTLRDRILDPLWTSFNYTSFPPDQPDPIIQALNQAMTPPFGAGGRFVWLINTTLGQNCPDHILAELQRTLKVIPPDSTLLLTSRNKPDERLKSTKLLKQFATISEFSLIPPWKTELLVQSVQQVAQTIGLKISPLVAELLAESVGNDTRLLYNELEKLRLYTEGSGKPLDVNTVSELVRNTTQNTLQLATAIRTGDTPKALGILGDLSNAAEPGLRIVATLIGQFRTWLLVKMMMDSGERNPQAIAQGAEISNPKRIYFLQQEVKSLPLQQLISALPLLLELEVSLKQGASETSTLQTKVIELCQICRRT
>NZ_CP011456.1|WP_053539320.1|2986021_2987929_+|squalene--hopene-cyclase
MQTQDRIKVKQVVDAIAASQKHLLSIQNPDGYWWAELESNVTITSEAVLLHKIWGTEKTRPLHKVENYLRSQQREHGGWELFYGDGGDLNTTVEAYMALRLLGVPATDTALLKAKSLILAKGGISKTRIFTKLHLALIGCYNWRGLPSLPPWVMLLPDNFFFNIYELSSWARSSTVPLLIVFDRKPIFNIDQPINLDELYAECIENVVWQLPKNGDWSDIFNILDDGFKLAESINFVPFRNEGIKAAEKWILERQEVTGDWGGIIPAMLNSLLALKCLDYDANDPVIERGLKAVDNFAIETENSYCVQPCVSPVWDTAWAIRALIDSGFAPNDPAIVKAGEWLIEKQILDYGDWNVKNKQGKPGAWAFEFENRFYPDVDDSAVVVMALHQAKLPNEELKKQAIDRALNWIATMQCKPGGWAAFDLNNDQEWLNSVPYGDLKAMIDPNTADVTARVLEMLGACNLSIQPDNLEKSLDYLLKEQEIEGCWFGRWGVNYIYGTSGVLSALALINPLKYARDINQGAAWLVKVQNSDGGWGETCFSYNDPSLKGKGDSTASQTAWALIGLIAAGEATGKLALDSIEKGINYLLETQKSDGTWDEIYFTGTGFPCHFYLKYHLYQQYFPLMALGRYQAIR
>NZ_CP011456.1|WP_053539319.1|2984698_2985868_-|glycosyltransferase
MATIIFSLTLLSLVIWIFLLLFWGQFWRVNHQLEANKDKDIDNNILPTVCVIIPARNEADVIPVSLRSLLLQDYPGKFTIFLVDDQSSDGTANFAQGVAHALDKTPQLQIISSPPLPPGWTGKLWAMEQGVQTASQLKPDYFLLTDADIEHHPSNLRRLVAKAEAQKLDLVSIMVRLRCQSFWEQLLIPAFVFFFQKLYPFSWVNNPKKAIAAAAGGCILIQKEALNRIGGLQVIRQALIDDCSLAKAVKSTKGKIWLGLSTLTRSLRPYDSLKTIWDMVARSAYTQLNYSPFLLLGSLLGMILVYIVPPIGIILGLVFGNWIITLTSVIGYLLMTFAYFPITRFYKCSPAFAFSLPIIAFMYTCMTLDSALQHWQGLGGAWKGRVYAK
>NZ_CP011456.1|WP_053539327.1|3007859_3008288_-|glyoxalase/bleomycin-resistance/dioxygenase-family-protein
MHHASIRTANIHLAIAFYEQLGFKVGDRFTTGYTLACWMEGLGTRIELIQIPQPKPAPDAFNDEHYVGYYHLAFDVTQITSDLPTWLESLRIRLATIEYLPPLKILLEPTQQQIGDNILEVAFIADFDGLPLEFLRFLHKST
>NZ_CP011456.1|WP_027403906.1|3008417_3008933_-|TIGR02652-family-protein
MINPGFQYPIFGPEIQCPHCRQTISALTLTDTYLCPRHGAFEAEPKTGELVHLQSGRHWRRWDGEWYRQHTHPDGIRFEIHEALDKLYTQGYRATRIIVANRYQELMSGYLERSTPWRSGQGEVATGARLYGLPVEFSPDSAAEPCWEVINFDLDKEPGVPVRYPYFRLFE
>NZ_CP011456.1|WP_053539328.1|3009172_3009676_+|gamma-carbonic-anhydrase-family-protein
MSISSVWKSPEFSQAAFVAANAIIIGSVTIAAKASIWYGSVVRGDVERIEIGECTNIQDGAILHGDPGVPTILEDHVTVGHRAVVHSAHIERGCLIGIGAIVLNGVRVGTGSIIGAGAVVTKNVPPGSLVMGIPGKVVRQLTDTEITELIEHAEKYHQLALLHAANG
>NZ_CP011456.1|WP_053539329.1|3009906_3010032_+|photosystem-II-protein-Y
MDLDNRVLIVLAPVAIAAGWAAFNIGAAAIRQIQNFLSKEA
>NZ_CP011456.1|WP_053539330.1|3010103_3011405_+|bifunctional-folylpolyglutamate-synthase/dihydrofolate-synthase
MNVDSLLQPFQHFGVNLGLSRIVNLLATLGNPHHQVPIIHVAGTNGKGSVCAYLSAVLTEAGYKTGRYTSPHLIDWTERICINEYPIDSNNLCELILQVQAAINPEEESPTQFEVITAAAWLYFAQQKVDIAVIEVGLGGRLDATNVCNNPLVTVITSISREHWQQLGPTVAHIAREKAGIIKPGCPVVVGSLPEAAENVVKSRILELECPIFTPQPSDQINQNWAEYQKISSPETIKYPLPLQGKIQLHNSALALAALEILQTQNWQISEKAMINGMAKTKWPGRMQWTTWKSHKLLIDGAHNPASATVLRDYVDTLNIKNITWVMGMLATKDHGEIFQELLKAGDKLYLVPVPDSNSADLTALTKLATSICPDLKFCHIYQDVFSALETAFSATDNQVVLCGSLYLIGHFLASLSDSALSDKINHPENPDL
>NZ_CP011456.1|WP_039201368.1|3011630_3012929_-|sugar-ABC-transporter-substrate-binding-protein
MIRLQKFKQLFCLALLGLFTSWIVSCSTSNVNNNPKPAAAGVATIEFWTMQLQPQFTDYFQGLIKTFESQNPSIKVKWVDIPWSAMENKILTAVSAKTPPDVVNLNPDFASQLAGKNAWLDLDAKVPSQVRSTYLPNIWQASSLNGKSFGIPWYLTTRLTIYNTDLLKQGGMTKPPATYAELGQAAQQIKDKTGKYAIFATFVPQDSGEVLESLVQMGVTLVNAEGKAGFNTPQGKAAFQYWVDLYKKGLLPKESLTQGHRHAIDLYQSGETAFLASGPEFLKTIANNAPKVAQASAIAPQITGDTGKKNVAVMNIVIPRDSKYPDQAVKFALFVTNDENQLAFAKAANVLPSTVKALSDTYFQEVPANATSAEKGRVISAAQLKQAEVLTPKLKDSKLLQKSIYENLQAAMLGQKTVDKAVEDAAQQWDNR
>NZ_CP011456.1|WP_081424366.1|3012998_3013220_-|hypothetical-protein
MLVVSCQLSDKNFYPLPITHYPLPITHYPLPITHYPLPITHYPLPITHYPLPITHYPLPITHYPLPITHYPLP
>NZ_CP011456.1|WP_053539331.1|3013397_3014504_+|pilus-assembly-protein-PilM
MVKAFTSFFGKSNRGIGIELAPERVNVVQLRKQRQNLKIESLTTVPVPEGIFTDGQITDSPGMSEIIQQAIAQSKIKATRVATCIPGRDAIVRLIPVPSELDDQELREMVLNHEACLYLPYDRQEADVDYQKLGYFIDEDGIEKVQVLLVATRKNVTQTYLNTFEQAGLTVDILEINSFALIRTIRDQLRLFGPEEAAVLVDIEFDSTEIAIIINGVPQFSRTVPIGTYQLQAALSRAVNLPTSRDMDILESMTIPTTSADSVNTGVTGSNPGMVSMLRILGELADELRRSIDFYLNQSENLEVAQILLAGPGGGLPQIDEFFTQRLSLPTTQIDPITSLSLEVDAEKYPLIKRPGLGIILGLGMRGV
>NZ_CP011456.1|WP_039201367.1|3014508_3015309_+|fimbrial-protein
MYSLDINFLKDRPEYQKQIATKVEKSPIQLGNLIPVYIGVGVGLVFPALIFIGLSILEGKTAEVTQEIAKLEEEGKSLDSKIANISKIKAESAGIRTQNKALVTVFDQIRPWSAMLQDLRDRIPNKVQIETIKQIAPPLPGKDAVAATTPNNTNTAGFLEISGFAISYPLVNDFALSIGQSKFFNKEETRIITAELIDAPAITGFLPPKTDKSDLKIKPIQVVKYTIKTGLSNVPASDLIQELEKKGTVGLVDRLRNIKKVGVIAQ
>NZ_CP011456.1|WP_053539332.1|3015305_3016067_+|pilus-assembly-protein-PilO
MTFSDDLNFPNQGTEIQNSGPVVFGVTLTPTIIGGLVGFLGVAGAGYMLFNIALPVWDTYQQLQTKQDQLQTEVNQKKTQAQQIGKIEADLVEAKQQQQQILALFADEKSLDTLLLDTSRLIDSSNSKAFGNAIRAKLKRFVPTSEKPVLVEDGSFGVEVNNKLKHSIITVDMEGDFEQTQSIIRNIERLQPLLLVKNYDSRLSTPEMSEDKDNPVQIGIGKLTTTFALEALMPLTPEEITDLAAKTAATPKK

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Crispr_ID: NZ_CP011456_26

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011456_26

3030745-3030824

Orphan

Consensus_repeat	Method
TGTTCCCTGCGATGCACTGAGCTTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP011456_26

>merge|NZ_CP011456|26|3030745-3030824|CRISPRCasFinder
TGTTCCCTGCGATGCACTGAGCTTGCGATGCCCTGAGCCTGTCGAAGGGTCGAAGTGTTCTCTGCGATGCACTGAGCTTG

>NZ_CP011456|26|25|3030745-3030824|CRISPRCasFinder
TGTTCCCTGCGATGCACTGAGCTTG	CGATGCCCTGAGCCTGTCGAAGGGTCGAAG
TGTTCTCTGCGATGCACTGAGCTTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011456.1\|WP_081424367.1\|3031909_3032608_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|309968
NZ_CP011456.1\|WP_053539351.1\|3038309_3039191_+\|beta-carotene-hydroxylase	unknown	unknown	gnl\|CDD\|239591
NZ_CP011456.1\|WP_053539346.1\|3034491_3034977_-\|DUF3368-domain-containing-protein	unknown	unknown	gnl\|CDD\|225269
NZ_CP011456.1\|WP_053539340.1\|3025258_3026659_+\|metal-dependent-phosphohydrolase	unknown	unknown	gnl\|CDD\|226701
NZ_CP011456.1\|WP_053539336.1\|3021894_3022305_+\|AbrB-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|372980
NZ_CP011456.1\|WP_053539343.1\|3028313_3029201_+\|dTDP-4-dehydrorhamnose-reductase	unknown	unknown	gnl\|CDD\|367904
NZ_CP011456.1\|WP_081424219.1\|3032723_3034391_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372995
NZ_CP011456.1\|WP_053539342.1\|3027775_3028321_+\|dTDP-4-dehydrorhamnose-3,5-epimerase	unknown	unknown	gnl\|CDD\|376414
NZ_CP011456.1\|WP_053539341.1\|3026655_3027309_+\|pentapeptide-repeat-containing-protein	unknown	unknown	gnl\|CDD\|224276
NZ_CP011456.1\|WP_053539349.1\|3035637_3035967_+\|type-II-toxin-antitoxin-system-PemK/MazF-family-toxin	unknown	unknown	gnl\|CDD\|367091
NZ_CP011456.1\|WP_053539339.1\|3023515_3025090_+\|B12-binding-domain-containing-radical-SAM-protein	unknown	unknown	gnl\|CDD\|223963
NZ_CP011456.1\|WP_053539350.1\|3036114_3037884_-\|pyruvate-kinase	unknown	unknown	gnl\|CDD\|235784
NZ_CP011456.1\|WP_053541286.1\|3039239_3040106_+\|fructosamine-kinase-family-protein	unknown	unknown	gnl\|CDD\|367711
NZ_CP011456.1\|WP_072033569.1\|3030912_3031605_-\|DUF3800-domain-containing-protein	unknown	unknown	gnl\|CDD\|378919
NZ_CP011456.1\|WP_053539344.1\|3029197_3030274_+\|glucose-1-phosphate-thymidylyltransferase	unknown	unknown	gnl\|CDD\|273500
NZ_CP011456.1\|WP_039200160.1\|3021041_3021485_-\|Rrf2-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224870
NZ_CP011456.1\|WP_053539348.1\|3035389_3035650_+\|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|225215
NZ_CP011456.1\|WP_053539337.1\|3022540_3022936_-\|DUF1830-domain-containing-protein	unknown	unknown	gnl\|CDD\|370162
NZ_CP011456.1\|WP_053539347.1\|3034982_3035234_-\|UPF0175-family-protein	unknown	unknown	gnl\|CDD\|377095
NZ_CP011456.1\|WP_053539338.1\|3023289_3023499_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP011456.1\|WP_081424367.1\|3031909_3032608_+\|hypothetical-protein	gnl\|CDD\|309968	pfam05057, DUF676, Putative serine esterase (DUF676). This family of proteins are probably serine esterase type enzymes with an alpha/beta hydrolase fold.	0.00243409
NZ_CP011456.1\|WP_053539351.1\|3038309_3039191_+\|beta-carotene-hydroxylase	gnl\|CDD\|239591	cd03514, CrtR_beta-carotene-hydroxylase, Beta-carotene hydroxylase (CrtR), the carotenoid zeaxanthin biosynthetic enzyme catalyzes the addition of hydroxyl groups to the beta-ionone rings of beta-carotene to form zeaxanthin and is found in bacteria and red algae. Carotenoids are important natural pigments; zeaxanthin and lutein are the only dietary carotenoids that accumulate in the macular region of the retina and lens. It is proposed that these carotenoids protect ocular tissues against photooxidative damage. CrtR does not show overall amino acid sequence similarity to the beta-carotene hydroxylases similar to CrtZ, an astaxanthin biosynthetic beta-carotene hydroxylase. However, CrtR does show sequence similarity to the green alga, Haematococcus pluvialis, beta-carotene ketolase (CrtW), which converts beta-carotene to canthaxanthin. Sequences of the CrtR_beta-carotene-hydroxylase domain family, as well as, the CrtW_beta-carotene-ketolase domain family appear to be structurally related to membrane fatty acid desaturases and alkane hydroxylases. They all share in common extensive hydrophobic regions that would be capable of spanning the membrane bilayer at least twice. Comparison of these sequences also reveals three regions of conserved histidine cluster motifs that contain eight histidine residues: HXXXH, HXXHH, and HXXHH. These histidine residues are reported to be catalytically essential and proposed to be the ligands for the iron atoms contained within homologs, stearoyl CoA desaturase and alkane hydroxylase.	1.72824e-92
NZ_CP011456.1\|WP_053539346.1\|3034491_3034977_-\|DUF3368-domain-containing-protein	gnl\|CDD\|225269	COG2405, COG2405, Predicted nucleic acid-binding protein, contains PIN domain [General function prediction only].	5.23156e-39
NZ_CP011456.1\|WP_053539340.1\|3025258_3026659_+\|metal-dependent-phosphohydrolase	gnl\|CDD\|226701	COG4250, COG4250, Predicted sensor protein/domain [Signal transduction mechanisms].	2.90484e-67
NZ_CP011456.1\|WP_053539336.1\|3021894_3022305_+\|AbrB-family-transcriptional-regulator	gnl\|CDD\|372980	pfam14250, AbrB-like, AbrB-like transcriptional regulator. This family of DNA-binding proteins is likely to act as a transcriptional regulator. This family does not include E.coli AbrB, which belongs to pfam05145.	8.38239e-41
NZ_CP011456.1\|WP_053539343.1\|3028313_3029201_+\|dTDP-4-dehydrorhamnose-reductase	gnl\|CDD\|367904	pfam04321, RmlD_sub_bind, RmlD substrate binding domain. L-rhamnose is a saccharide required for the virulence of some bacteria. Its precursor, dTDP-L-rhamnose, is synthesized by four different enzymes the final one of which is RmlD. The RmlD substrate binding domain is responsible for binding a sugar nucleotide.	1.52134e-138
NZ_CP011456.1\|WP_081424219.1\|3032723_3034391_-\|hypothetical-protein	gnl\|CDD\|372995	pfam14279, HNH_5, HNH endonuclease. This domain is related to other HNH domain families such as pfam01844. Suggesting that these proteins have a nucleic acid cleaving function.	9.64657e-07
NZ_CP011456.1\|WP_053539342.1\|3027775_3028321_+\|dTDP-4-dehydrorhamnose-3,5-epimerase	gnl\|CDD\|376414	pfam00908, dTDP_sugar_isom, dTDP-4-dehydrorhamnose 3,5-epimerase. This family catalyze the isomerisation of dTDP-4-dehydro-6-deoxy -D-glucose with dTDP-4-dehydro-6-deoxy-L-mannose. The EC number of this enzyme is 5.1.3.13.	4.54987e-109
NZ_CP011456.1\|WP_053539341.1\|3026655_3027309_+\|pentapeptide-repeat-containing-protein	gnl\|CDD\|224276	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown].	2.85374e-34
NZ_CP011456.1\|WP_053539349.1\|3035637_3035967_+\|type-II-toxin-antitoxin-system-PemK/MazF-family-toxin	gnl\|CDD\|367091	pfam02452, PemK_toxin, PemK-like, MazF-like toxin of type II toxin-antitoxin system. PemK is a growth inhibitor in E. coli known to bind to the promoter region of the Pem operon, auto-regulating synthesis. This family represents the toxin molecule of a typical bacterial toxin-antitoxin system pairing. The family includes a number of different toxins, such as MazF, Kid, PemK, ChpA, ChpB and ChpAK.	1.85439e-32
NZ_CP011456.1\|WP_053539339.1\|3023515_3025090_+\|B12-binding-domain-containing-radical-SAM-protein	gnl\|CDD\|223963	COG1032, COG1032, Fe-S oxidoreductase [Energy production and conversion].	3.74228e-55
NZ_CP011456.1\|WP_053539350.1\|3036114_3037884_-\|pyruvate-kinase	gnl\|CDD\|235784	PRK06354, PRK06354, pyruvate kinase; Provisional.	0
NZ_CP011456.1\|WP_072033569.1\|3030912_3031605_-\|DUF3800-domain-containing-protein	gnl\|CDD\|378919	pfam12686, DUF3800, Protein of unknown function (DUF3800). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria, archaea, eukaryotes and viruses. Proteins in this family are typically between 215 and 302 amino acids in length. There is a DE motif at the N-terminus and a QXXD motif at the C-terminus that may be functionally important.	2.35041e-05
NZ_CP011456.1\|WP_053539344.1\|3029197_3030274_+\|glucose-1-phosphate-thymidylyltransferase	gnl\|CDD\|273500	TIGR01208, rmlA_long, glucose-1-phosphate thymidylylransferase, long form. The family of known and putative glucose-1-phosphate thymidyltransferase (also called dTDP-glucose synthase) shows a deep split into a short form (see TIGR01207) and a long form described by this model. The homotetrameric short form is found in numerous bacterial species that incorporate dTDP-L-rhamnose, which it helps synthesize, into the cell wall. It is subject to feedback inhibition. This form, in contrast, is found in many species for which it serves as a sugar-activating enzyme for antibiotic biosynthesis and or other, unknown pathways, and in which dTDP-L-rhamnose is not necessarily produced. Alternate name: dTDP-D-glucose synthase.	4.32704e-177
NZ_CP011456.1\|WP_039200160.1\|3021041_3021485_-\|Rrf2-family-transcriptional-regulator	gnl\|CDD\|224870	COG1959, COG1959, Predicted transcriptional regulator [Transcription].	5.51527e-45
NZ_CP011456.1\|WP_053539348.1\|3035389_3035650_+\|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein	gnl\|CDD\|225215	COG2336, MazE, Growth regulator [Signal transduction mechanisms].	4.53003e-08
NZ_CP011456.1\|WP_053539337.1\|3022540_3022936_-\|DUF1830-domain-containing-protein	gnl\|CDD\|370162	pfam08865, DUF1830, Domain of unknown function (DUF1830). This family of short proteins is functionally uncharacterized.	1.29834e-41
NZ_CP011456.1\|WP_053539347.1\|3034982_3035234_-\|UPF0175-family-protein	gnl\|CDD\|377095	pfam03683, UPF0175, Uncharacterized protein family (UPF0175). This family contains small proteins of unknown function.	4.22882e-16
NZ_CP011456.1\|WP_053541286.1\|3039239_3040106_+\|fructosamine-kinase-family-protein	gnl\|CDD\|367711	pfam03881, Fructosamin_kin, Fructosamine kinase. This family includes eukaryotic fructosamine-3-kinase enzymes. The family also includes bacterial members that have not been characterized but probably have a similar or identical function.	4.07987e-155

>NZ_CP011456.1|WP_053539344.1|3029197_3030274_+|glucose-1-phosphate-thymidylyltransferase
MKALILSGGKGTRLRPLTYTGAKQLVPVANKPILWYGIEEMATSGITDIGIIISPETGEEVKSKTGNGEKFGVNITYILQEKPAGLAQAVQVARPFLKDSPFAMYLGDNLIQQGDLSSFLDKFTQQQPDALILLREVTNPSAFGVAKVDEKGRVLQLIEKPKIPPSNLALVGVYFFSPVIHEAISLIKPSARGELEITDAIQCLIDQEKEVLACNLDGWWLDTGKKDDLLEANRLILDTYLTKSILSDIDSTTQITGRVEIGVGSKITNCTIRGPVIIGNNCYLENCFIGPYSSIADNSTLIETDLEHSVVLEGAKITGIQQRIIDSLIGQRAQLSIAPRRPKALRFLIGDDSQIELT
>NZ_CP011456.1|WP_053539343.1|3028313_3029201_+|dTDP-4-dehydrorhamnose-reductase
MNKSILLIGSNGQVGTELQHTLSSNYKVITVARPQIDLTQPENLRQIIRETQPEIIINAAAYTAVDKAESEPEIAHIINTIAPQVIAEESQKLGNFLIHISTDYVFDGNSNYPYQENKITNPLSVYGQTKLAGEIAIQNICPQHIILRTAWVYGTYGKSNFVKTMLRLGIERPEVRVVADQIGSPTWARNIALAITQIIPQLTLETAGIYHYTNSGVASWYDFAIAIFEEAEKLGFPLTIKNIIPITTPEYPTPAKRPAYSVLACEKISKVLGTYSPHWRQGLRLMLKELQEKSL
>NZ_CP011456.1|WP_053539342.1|3027775_3028321_+|dTDP-4-dehydrorhamnose-3,5-epimerase
MNIISTSIPDILLLEPQVFQDSRGFFLESYNQKTFTEKLGITANFVQDNHSKSEYNVLRGLHYQIIQPQGKLVRAIVGKIFDVAVDMRKNSPTFGQWVGYELSAENKRQLWIPAGFAHGFLVLSETAEVLYKATDYYTPAGDRAILWNDPDLAIDWPLKTPPILSAKDSNARTFKNAEVYE
>NZ_CP011456.1|WP_053539341.1|3026655_3027309_+|pentapeptide-repeat-containing-protein
MNIETIRLGQNKQLPGVNLEDEDLSHLDLRKINLTGAKLVGTDFTGSKLEGGHFEGANLMGANLQETDLRANLMGANLMQANLTSADLRGSNLRGSNLMGAILNDASLAGAFLSGANLHGVNLQSVDLRCADLRGANLTGANLKGADLSGADLQGAVLIEANLEEADLRAANLAGADLTGANLLCAELDAVKLNGANLDRVCLRGTVLEASTAARRN
>NZ_CP011456.1|WP_053539340.1|3025258_3026659_+|metal-dependent-phosphohydrolase
MLQGSILQQLEASHRHSARPIHFGVYYKNTLVSLCHALEDHILTKDNDPFVITAFQQGKWYLEEAQRYADIAKHSREIVIMATADSGFAEHPTGQLPNIDLVGLAADDPVAQEWHLIILAPDYTAMVICQELSEADYGKDGLPTCDLERKFYGLWTFEPELVEETAELAIAHIQDYHPELALKLSQYKQAIHPAICPGEEVATVVSRVVDYLKTGQGNLPVLTASHQKFLDRNLVSNEIQAFLRMAQLIDLADSRNPVAASEVASVVETMGQLLDLPAWQIKRLRLAALLHRLDQLQKAESLISPTHITTAYQEQSPSCPLACPLVPGAQALRIMPRLRAIAQIITHQSEWWNGTGEPAGLAGDDIPLESRILSLIAEFQLQVNQYKYSSKGEAEIFTQALDQCRKQQSTRFDPKLVDTLGLLVMGLQQGLDLPIMTPKVSSGLWLLDSRWDADSKSSEQISVYSK
>NZ_CP011456.1|WP_053539339.1|3023515_3025090_+|B12-binding-domain-containing-radical-SAM-protein
MNATKILYVRLPCNPIFPIGVVYLSDHVHKLFPHAEQRIFDLGTIPPLDYTSALDRCIDEFQPTLLVFSWRDIQIYAPVGGRGGNPLQNAFEFYYAKNPFIKLRGALGGLRIFIAYYVELWRNLGLVKRGLKRAQKYQSQARVVLGGGAVSVFYEQLGKSLPPGTIISVGEGETLLTKLLKGEDFQDERCYVVGENKPRQRLIHEQPTPLEKTVCNYDYIETIWPEFNYYLQEQDFYIGVQTKRGCPHNCCYCVYTVVEGKQVRINPSDEVVAEIRELYNRGIRNFWFTDAQFIPARKFIDDAVELLQKIVDSGMSDIHWAAYIRADNLTPQLCELMVKTGMNYFEIGITSGSQELVRKMRMGYNLRTVLQNCRDLKSAGFNDVVSVNYSFNVIDERPETIRQTIAYHRELERIFGADKVEPAIFFIGLQPHTHLEEYAFKEGILKPGYDPMSLMPWTAKKLLWNPEPLGSFFGEVCLQAWRQNPNDFGREVMNILEAKLGCADLEDALSAPIEKPEKQLASVS
>NZ_CP011456.1|WP_053539338.1|3023289_3023499_-|hypothetical-protein
MLAVVEKKTRGIVNLLLTGLALSLTFQLFCAMQKLLPLVIKVNVKTALHKICLLYIDGIYERNFHIHLP
>NZ_CP011456.1|WP_053539337.1|3022540_3022936_-|DUF1830-domain-containing-protein
MAQILDPLPPEHSGKILCCYVNATSKIQVARISNIPNWYFERVVFPGQRLVFEVPPEGQMEVHTGMMASAIISDTIPCDRLIIHEPSYDERQDNLSPEINSSSSNPIKSEINKKIVDTTKSLQPVKLASID
>NZ_CP011456.1|WP_053539336.1|3021894_3022305_+|AbrB-family-transcriptional-regulator
MPKQKKIEPLVGEELLKKVKELEAISKDDKAKQCGYYTITKNGIERVNMMKFLNALIDAEGIQLDSSPSANGRGGRSASYRISVQQNGNLLIGAAYTKQMNLQPGDEFVITLGKKHIRLRQVDLESTEDAEVEATA
>NZ_CP011456.1|WP_039200160.1|3021041_3021485_-|Rrf2-family-transcriptional-regulator
MKLTTRGHYSVKALLDLSLRPKYGPESVRAIAKRQNIPAPYLEKLLIEMRRAGLVTSIRGSDGGYKLAKKPALISIGQILEAVGENITNLPLNNPTPTQTADWVTSSLWNRLNQKLKEALYNITLADLYYDARSWQASQGEETNFVV
>NZ_CP011456.1|WP_072033569.1|3030912_3031605_-|DUF3800-domain-containing-protein
MYLLYADESGTTHDQNQQYFVLAGFCIFERQGYWISDQLDKIAARFDPADPLSVELHGSPMLSGRGKWRSYSKSDREKAIEDILQVFLQSHPSNRLFASVIKKTLVSPKDPVEVAFEQLASRFDRYLIRLHKHDNTQRGIIIFDKSTYETTIQSLATDFRTIGYSWGVIRNFSEVPLFLDSKASRLIQLADIIAYAIFRNFEKGDSRFFSIIQQRFDSEGGIVHGLHILQ
>NZ_CP011456.1|WP_081424367.1|3031909_3032608_+|hypothetical-protein
MSYRSRRKELISNFLGDFLIYQNPKRGQLIRKRIFEEFNQFIQDHPKETQIHFIAHSLGSLILWDILFSDVISHDDSVLQFRDKLHKLDLVSITTLGSPLLFLKEMLDIDFSIVNSIIDKSSSKNSGNSYKLRWVNIIHSSDLIAYPLKAAIENEISSDLLFCDQYVWQDANGTELTLRNIGQSDMAMVIAAEDAHSSYFYDNLDGAITARIISYNLLGETNKLLQRCITPK
>NZ_CP011456.1|WP_081424219.1|3032723_3034391_-|hypothetical-protein
MNLCYLCGREMFDKKYYLENEEKFTENPALKHDEHIIQNSLAGKLKSNNILCETCGSKLNESVDKNFGDLFALIITEQLRKKNIHKERRNNSPTLEGYCFDKEKQKIIKVHIKDFKASPIKPFPKFDEENKIIKIYGNLSSVKSYKDKVISDLKNQGKDINSYKIQCITDISSDNDFFYLPFPEGNDNFNEILALLNHGMISSNLERIFDGLNRQSILYLCNSEIFRKGLNKIATGFAYDHGVKRSDLVRTLDITEGNEKIIDSDNIIPFFSQGMFDIFLDLHRSELENYYPTHTLILFTQKYTNNKKSLYCYIDLFSTFQYYVILNDNYEGEDIYEVYYQTVLKQEITKIDIRKVRPKHLNIIIEDFGIDRSKYQGSSVNDLYDFIEEEYKKLNPEYQINLYDELENIANKLIISYSVSQEIQLPMPNLPQEKVIQSFRNFQDLDVISFLSEIKHFLDKDNYIFRRCFYKSDENDEVEILSTPDEMIVTLNLQKSHALAQEYGNMKFQQLQNFANSIPKEDILHTLLLKMLYHQPISKVIEKNPDQVDIDVDNF
>NZ_CP011456.1|WP_053539346.1|3034491_3034977_-|DUF3368-domain-containing-protein
MTVICNATPLINFAAINRLDILKEVFGQVIIPQAVYDETTVSGFLWSQFILQAVVSGWLQVRTVSNIDPIISPELDDGEREAIALALETGVHKILLDERDARKVAQSIGLRLIGTLGILLLAKEKHIISEIKPLLDGMIDVAQYWVNQNLYEQVLRQAGEL
>NZ_CP011456.1|WP_053539347.1|3034982_3035234_-|UPF0175-family-protein
MSKFASSINLQLSPDSLSQGESGIRQELALQLYAQNIFTFGQARRLANLSVWEFQQLLGERKIERHYNEVDLLEDVKSIQEGF
>NZ_CP011456.1|WP_053539348.1|3035389_3035650_+|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein
MGTAIKTRIVKIGNSQGLRIPKTLLEQSGINSEVEIEVQGNHLIIRPVEQVRKGWEKAFIEMAEKGDDILLDDINTTEWDKDEWQW
>NZ_CP011456.1|WP_053539349.1|3035637_3035967_+|type-II-toxin-antitoxin-system-PemK/MazF-family-toxin
MAMVVNRFDVFLVNLDPTISSEIKKTRPCLIISPNEINHHISTVIVAPMTTKGQPYPTRVTCQFQGKEGQIVLDQIRTVDKTRLIKLLGQITTEEQKAVLDILAEIFAE
>NZ_CP011456.1|WP_053539350.1|3036114_3037884_-|pyruvate-kinase
MTQLRDSQRRTKIVATIGPATSSPEMLKGIIEAGATTLRLNFSHGTHADHQRSIRLIRQTAFELNRPVAILQDLQGPKIRLGRFETGSIILAKGDRFTLTNRLIEGTQEISCVTYDYLAEEVPVGSSILLDDGKVEMVVEEINREKGDLHCRVTVPGKLSNNKGVNFPGVYLSIKAMTDKDREDLMFGLDQGVDWVALSFVRNPQDIIEIKELISSTGKNVPVVAKIEKHEAIEQMEAVLSLCDGVMVARGDLGVELPAEDVPVLQKRLIATANRLGIPIITATQMLDSMVSNPRPTRAEVSDVANAILDGTDAVMLSNETAVGSFPIEAVATMARIAERIEQEETLNTNSRLSRDKRRSIPNAISQAVGQIAENLGAAAIMTLTQTGATARNVSKFRPKTPILAITPHVNVARQLQMVWGVRPLLVLELPSTGQTFQAAINVAQEKNLLTEGDLVVMTAGTLQGVSGSTDLIKVEIVTAVLGQGIGLGQGSVSGRARVVHNAMDASNFNPGDILVASRTGVDFVEAIRKAGGIITEEESLTSHAAVIGLRLGVPVIVGVNDATQVIKDGAILTLDIQRGLIYSGVVGT
>NZ_CP011456.1|WP_053539351.1|3038309_3039191_+|beta-carotene-hydroxylase
MITSEAQKPLTIPPKELLSPPGDFNPTLLMFLVVVMMLVLSNFGYWLWEWPHWLCFSVNTLALHCSGTVIHDACHQSAHRNRIVNAMLGHCSALILAFAFPVFTRVHLQHHGNVNHPQDDPDHYVSTGGPLFLIAVRFLYHEVFFFQRRLWRNYELLEWFISRLIIITIVYISVQYHFLGYILNFWFIPAFLVGITLGLFFDYLPHRPFVERNRWKNARVYPGKVLNILILGQNYHLIHHLWPSIPWYNYQPAYYLMKPLLDEKGSPQTSGLLQKQDFLEFVYDIFIGIHLHH
>NZ_CP011456.1|WP_053541286.1|3039239_3040106_+|fructosamine-kinase-family-protein
MWTEIDTHISQVTGEKFVSQQHLSISGGCINQGFAISDRQLTYFVKLNQASQVSMFAAEMLGLQQMSTTGTIRVPGPICWGTTGNSSYIVLEWLEMTTGNHKSWQEMGRKLAAMHKTTSNQGFGWDINNTIGSTPQINNFSNSWIEFYIQHRLGYQFKLAKKRGGSFPLAEKLLAAIPELLANYQLQPALVHGDLWGGNAGFTVEGEPVIFDPATYFGDREVDVAMTELFGGFPPTFYQGYEEIYPLHTGYETRKTLYNLYHVLNHFNLFGGSYSSQANRMIEKILKV

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Crispr_ID: NZ_CP011456_27

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011456_27

3089675-3089783

Orphan

Consensus_repeat	Method
ACAATCCTGTACATCCTAAAATCCTGGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP011456_27

>merge|NZ_CP011456|27|3089675-3089783|CRISPRCasFinder
ACAATCCTGTACATCCTAAAATCCTGGAAATCCTGATTCAGACAATTACAATTTCAGCATCCCACCAACAACTTACAAATCACAATCCTGTAAATCCTAAAATCCTGGA

>NZ_CP011456|27|26|3089675-3089783|CRISPRCasFinder
ACAATCCTGTACATCCTAAAATCCTGGA	AATCCTGATTCAGACAATTACAATTTCAGCATCCCACCAACAACTTACAAATC
ACAATCCTGTAAATCCTAAAATCCTGGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011456.1\|WP_053539381.1\|3090826_3093697_-\|aminomethyl-transferring-glycine-dehydrogenase	unknown	unknown	gnl\|CDD\|235432
NZ_CP011456.1\|WP_039205159.1\|3078320_3078716_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053539374.1\|3080497_3081499_-\|apocytochrome-f	unknown	unknown	gnl\|CDD\|179460
NZ_CP011456.1\|WP_053539375.1\|3082461_3082770_+\|DUF3067-family-protein	unknown	unknown	gnl\|CDD\|371443
NZ_CP011456.1\|WP_053539383.1\|3094997_3095630_-\|DUF938-domain-containing-protein	unknown	unknown	gnl\|CDD\|253548
NZ_CP011456.1\|WP_027401612.1\|3081605_3082145_-\|cytochrome-b6-f-complex-iron-sulfur-subunit	unknown	unknown	gnl\|CDD\|237392
NZ_CP011456.1\|WP_053539379.1\|3088001_3088349_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl\|CDD\|368240
NZ_CP011456.1\|WP_039200762.1\|3100848_3101352_-\|DUF4112-domain-containing-protein	unknown	unknown	gnl\|CDD\|379180
NZ_CP011456.1\|WP_081424368.1\|3090107_3090677_+\|RNA-polymerase-subunit-sigma-24	unknown	unknown	unknown
NZ_CP011456.1\|WP_053539385.1\|3097620_3098682_+\|D-alanine--D-alanine-ligase	unknown	unknown	gnl\|CDD\|234993
NZ_CP011456.1\|WP_053539377.1\|3085823_3087074_+\|DUF4912-domain-containing-protein	unknown	unknown	gnl\|CDD\|225867
NZ_CP011456.1\|WP_039200763.1\|3099893_3100829_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_CP011456.1\|WP_053539384.1\|3095746_3097156_+\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	unknown	unknown	gnl\|CDD\|153251
NZ_CP011456.1\|WP_053539376.1\|3083050_3085339_+\|DUF4101-domain-containing-protein	unknown	unknown	gnl\|CDD\|372576
NZ_CP011456.1\|WP_053539382.1\|3093882_3094770_-\|rhodanese-related-sulfurtransferase	unknown	unknown	gnl\|CDD\|223982
NZ_CP011456.1\|WP_053539380.1\|3088799_3089195_+\|GxxExxY-protein	unknown	unknown	gnl\|CDD\|275083
NZ_CP011456.1\|WP_039200761.1\|3102114_3102576_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053539373.1\|3078828_3080055_-\|molybdopterin-molybdotransferase-MoeA	unknown	unknown	gnl\|CDD\|238452
NZ_CP011456.1\|WP_053539386.1\|3098878_3099394_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053539378.1\|3087750_3088005_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP011456.1\|WP_053539381.1\|3090826_3093697_-\|aminomethyl-transferring-glycine-dehydrogenase	gnl\|CDD\|235432	PRK05367, PRK05367, aminomethyl-transferring glycine dehydrogenase.	0
NZ_CP011456.1\|WP_053539384.1\|3095746_3097156_+\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	gnl\|CDD\|153251	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), Tafazzin (product of Barth syndrome gene), and similar proteins.	2.41084e-06
NZ_CP011456.1\|WP_053539374.1\|3080497_3081499_-\|apocytochrome-f	gnl\|CDD\|179460	PRK02693, PRK02693, apocytochrome f; Reviewed.	0
NZ_CP011456.1\|WP_053539375.1\|3082461_3082770_+\|DUF3067-family-protein	gnl\|CDD\|371443	pfam11267, DUF3067, Domain of unknown function (DUF3067). This family of proteins found in plants and cyanobacteria has no known function. The structure of this domain has been solved by NMR for the alr2454 protein. The structure was determined to be a novel fold composed of four alpha helices and a sheet of three anti-parallel beta-strands.	2.23881e-54
NZ_CP011456.1\|WP_027401612.1\|3081605_3082145_-\|cytochrome-b6-f-complex-iron-sulfur-subunit	gnl\|CDD\|237392	PRK13474, PRK13474, cytochrome b6-f complex iron-sulfur subunit; Provisional.	1.11816e-127
NZ_CP011456.1\|WP_053539379.1\|3088001_3088349_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl\|CDD\|368240	pfam05016, ParE_toxin, ParE toxin of type II toxin-antitoxin system, parDE. ParE is the toxin family of a type II toxin-antitoxin family. It is toxic towards DNA gyrase, but is neutralized by the antitoxin ParD. The family also encompasses RelE/ParE described in.	0.00176769
NZ_CP011456.1\|WP_039200762.1\|3100848_3101352_-\|DUF4112-domain-containing-protein	gnl\|CDD\|379180	pfam13430, DUF4112, Domain of unknown function (DUF4112). This family has several highly conserved GD sequence-motifs of unknown function. The family is found in bacteria, archaea and fungi.	8.20313e-38
NZ_CP011456.1\|WP_053539383.1\|3094997_3095630_-\|DUF938-domain-containing-protein	gnl\|CDD\|253548	pfam06080, DUF938, Protein of unknown function (DUF938). This family consists of several hypothetical proteins from both prokaryotes and eukaryotes. The function of this family is unknown.	1.32034e-94
NZ_CP011456.1\|WP_053539385.1\|3097620_3098682_+\|D-alanine--D-alanine-ligase	gnl\|CDD\|234993	PRK01966, ddl, D-alanine--D-alanine ligase.	0
NZ_CP011456.1\|WP_053539377.1\|3085823_3087074_+\|DUF4912-domain-containing-protein	gnl\|CDD\|225867	COG3330, COG3330, Uncharacterized protein conserved in bacteria [Function unknown].	4.86957e-92
NZ_CP011456.1\|WP_039200763.1\|3099893_3100829_-\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	3.48984e-33
NZ_CP011456.1\|WP_053539376.1\|3083050_3085339_+\|DUF4101-domain-containing-protein	gnl\|CDD\|372576	pfam13355, DUF4101, Protein of unknown function (DUF4101). This is a family of uncharacterized proteins, and is sometimes found in combination with pfam00226.	4.82908e-38
NZ_CP011456.1\|WP_053539382.1\|3093882_3094770_-\|rhodanese-related-sulfurtransferase	gnl\|CDD\|223982	COG1054, COG1054, Predicted sulfurtransferase [General function prediction only].	2.09091e-151
NZ_CP011456.1\|WP_053539380.1\|3088799_3089195_+\|GxxExxY-protein	gnl\|CDD\|275083	TIGR04256, conserved_hypothetical_protein, GxxExxY protein. Members of this protein family average about 130 residues in length and include an almost perfectly conserved motif GxxExxY. Members occur in a wide range of prokaryotes, including Proteobacteria, Perrucomicrobia, Cyanobacteria, Bacteriodetes, Archaea, etc.	1.0671e-50
NZ_CP011456.1\|WP_053539373.1\|3078828_3080055_-\|molybdopterin-molybdotransferase-MoeA	gnl\|CDD\|238452	cd00887, MoeA, MoeA family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF), an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea and eukaryotes. MoCF contains a tricyclic pyranopterin, termed molybdopterin (MPT). MoeA, together with MoaB, is responsible for the metal incorporation into MPT, the third step in MoCF biosynthesis. The plant homolog Cnx1 is a MoeA-MogA fusion protein. The mammalian homolog gephyrin is a MogA-MoeA fusion protein, that plays a critical role in postsynaptic anchoring of inhibitory glycine receptors and major GABAa receptor subtypes.	1.27655e-164

>NZ_CP011456.1|WP_053539380.1|3088799_3089195_+|GxxExxY-protein
MNTSNTQNLKLDEITYIINGCAMKIHRTLGNGFQEVIYQRCMEIELKKSGLGFGREVEQVIYYEGVEVGTRRADFIVENQVVVELKAVISLEDVHLAQAKNYLVAYNFPVGLLINFGGLKLEYKKVFNPRY
>NZ_CP011456.1|WP_053539379.1|3088001_3088349_+|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MKYYIDISSIAEAEADKAFLQMSQITSSEKASQWYAGLLQLIESLSQMPKRCSLARENDYFSQEIRQIIYGKGRNAYRIIFTIIEGEEISTVRVLHIRHAAQQTIGEVPDEFAQE
>NZ_CP011456.1|WP_053539378.1|3087750_3088005_+|hypothetical-protein
MAIAISLTPELEARLREKATQQGKDISLVAAELLKNILDWELEDSQVAIQGIQQGLDDFEAGRFRSFDDFANEQRRKYNLPREV
>NZ_CP011456.1|WP_053539377.1|3085823_3087074_+|DUF4912-domain-containing-protein
MAKERPPLEEMTLRQLRKVASEYCISRYSRMRKSQLLASIEDVQHSKFSLSSSPNLEAQETVEAAKFELGQEDRTGGSLADVDEALADLPAGYGDSRIVLLPRDPQWAYTYWDIPNDHKEALRRQGGQTLALRIYDVTDVDLDYQSPHSIQEYPADELAREWYLPIPVSDRDYVIDVGYRTADGGWLVLARSARVHIPPVYPADWIEDVFITVDFEEDLRGKTFYELVPPSKKLPTATATAAAGGGNPIYEQIFGLAESAEAQRVAGSIFGSMQHVPGSAAPEQALSSYVFPSGVGMWAIPTVSGLTMSGVGMSGFSASAVPARPRKFWLVADAELIVYGATEPDATVTIGGRPIKLNSDGTFRFQMSFQDGLIDYPILAVAADGEQTRSIHMKFERETPSRNTNTKDEAVLEWMV
>NZ_CP011456.1|WP_053539376.1|3083050_3085339_+|DUF4101-domain-containing-protein
MRIPLDYYRILGLPLAANEEQLRQAYSDRIVQLPRREYSTTSISSRKKLIEEAYMVLLNTDERKAYDQLYLAHVYTPSKTADTGSQENLVDTNSKDQDAQSLSIEITPERFIGSLLILQELGEYELVLKLGRPYLVNKPSPISLKTGHRTTQAETPENPDLPDIILTVSLACLELGREEWQQGHYENAAISLETGEELLAREGLFPSVRAEMTADLYKLRPYRILELLALPQTQIPKRRQGLELLQSILEDRGGIDGTGNDQSGLNIDDFLRFIQQIRHYLTVSEQHKLFELESKRPSAVATYLAVYSLIARGFAQRQPALIRQAKQLLMQLGKRQDVHLEQSLCALLMGQTEEATRVLELSQEYEALAFIREKSQDSPDLLPGLCLYSEQWLQQEVFPHFRDLAKQQASLKDYFADRQVQAYLESLPNDAQITNEWAVINHQSFPQPDIHHSRHHNNNTTQTPQHHQPVNPELPETHPRPQPESSQGSIPRWNHPSTDGNEGNQISQIPLTAANPNRRTHPVNDHPTAVTNQQPPKRRRRKPTANTLPQRFIQSQANFLSSLDPKTRLVWLVFFSLGGVLIFSLLVSTTFGLVKNIFFPSPSLKGEQLAIQLNQPPINIPDPNSEPEATNNEELTKETAKEVIETWLSAKTSALGQNHDIDGLKEILTGAVLSQWQSVAQQEQEDQRHRQYKHNVEIVTVSNKGTDKDYVSVDAQVQEVTKFYQNSQQQKSSSENLRVRYDLVRKEGKWLIQKMSVIQNFL
>NZ_CP011456.1|WP_053539375.1|3082461_3082770_+|DUF3067-family-protein
MTGKELRQLLIDKWGQPYDVQFRRTQGKIFLQIMWKYFGQASFPMSEIDYQDHLDSIANYLNALGGIQQVQTFILETKERPRLGKAVSIPLDLGERASEWIV
>NZ_CP011456.1|WP_027401612.1|3081605_3082145_-|cytochrome-b6-f-complex-iron-sulfur-subunit
MAQFSEITDVPDMGRRQFMNLLTFGTVTGVALGALYPVINYFIPPASGGAGGGTVAKNELGNDVSVSKFLDSHNVGDRTLVQGLKGDPTYIVVESKEAIADYGINAICTHLGCVVPWNVAENKFKCPCHGSQYDATGKVIRGPAPKSLALAHANVEDDKILLTPWTETDFRTGDAAWWA
>NZ_CP011456.1|WP_053539374.1|3080497_3081499_-|apocytochrome-f
MRNALTPARLTRTAKAMVNTLLIAIATVTFLFTSDIAVPQTAAAYPFWAQQTAPATPREATGRIVCANCHLAAKPTEVEIPQSVLPDTVFKAVVKIPYDTTVQQVGADGSKVGLNVGAVLMLPEGFKIAPEDRIPEEMKAEVGDMTFTPYNDTTDNVVIVGPLPGEEYQEIVFPILSPNPATDKNIHFGKYSVHVGGNRGRGQVYPTGEKSNNNLFNASAAGTISKIAQTEDEDGNVKNLISITTATGDVVTDTVPVGPELIVTQGQAVAIGDALTNNPNVGGFGQRDAEIVLQDSSRVTWLVAFICLVMMAQIMLVLKKKQVEKVQAAEMNF
>NZ_CP011456.1|WP_053539373.1|3078828_3080055_-|molybdopterin-molybdotransferase-MoeA
MLSVKDAETIIFNHVQPLNQEHDLEVVDLLTAFHRILATPVISSLDFPHWDNSAMDGFAVRYEDVQNSTSENPTILEVVEEIPAGYQPQNTIQPGQAARIFTGAIIPKGADTVVMQEKTNLEKNWVSIFSAPQPQEFVRHQGDFYQAGKELLPAGIPLNAAEIAILAAAQLAEISVFRRLRVAIFSSGDELVTPEQTLKPGQIVDSNQYALVALVRELGAEVLMLGIVKDNQTALTETINYAINHADIVLSSGGVSVGDYDYIDNILASLGAEIHFRAVQMRPGKPLTFATFPNSLYFGLPGNPVSALVTFWRFVKPTIKKLSGINRGWESKFIKVKSHCELKSNGKMETYIWGNLKLNDGIYEFKQTSGNLNSGNLINLSQTNALAILPVGKTLISPGEETLVLRIG
>NZ_CP011456.1|WP_039205159.1|3078320_3078716_+|hypothetical-protein
MTTLKLKNHQIWQDLTEILENLDTNSLVQKHLEQCCYTINGYWDEQDKYYESITLPHPIEAKLVSSFVGITQDNRFLKLKFSLMNFLENIGELVLIYNENLELIDENWLLDIDSPMLPLNQNNLIIRFISF
>NZ_CP011456.1|WP_081424368.1|3090107_3090677_+|RNA-polymerase-subunit-sigma-24
MIILNSFVSPAFAGCNPDIGLSNGKTVVEAVAETGAAVSAAVSAATGLSVAATSGAGIASGLAAAGGIVGGGMAAGPAVLAGGPAYAGAKILNATLFKEESGLSEKECNARSAARTATNIGAAVGVTGAGAVTVVAGASGAAIMSTLAGIGGVVGGGAIAGTAIVAAAPVVAAGAIGYGIYKLFGGGKE
>NZ_CP011456.1|WP_053539381.1|3090826_3093697_-|aminomethyl-transferring-glycine-dehydrogenase
MVANPPRTQPHTSQKLGNFAQRHIAPKPDDVQQMLDLLGLSSLDDLIDKTVPQAIRFHQTLNLPAAQSEYAALAKLKQIADKNQVYRSFIGMGYYDCITPTVIQRNILENPGWYTAYTPYQPEIAQGRLEALLNFQTMIIDLTGLEIANASLLDEGTAAAEAMSMSYGVCKNKSHNYFVSSECHPQTIDVLQTRAKPLGINIIIGDHQTFDFSETIFGAVLQYPATDGTIYDYRNFITKSHAQGALVTIAADPLSLTLLTPPGELGADIAVGSTQRFGIPLGFGGPHAAYFATKEEYKRLVPGRIVGVSKDIHGKPAYRLALQTREQHIRRDKATSNICTAQVLLAVMASMYAVYHGPDGLRAIAQNIHELTATLAAGLQKLGYKISSENFFDTLRVELGNTKLEAILDAANERNINLRIFDNSTVGISLDETTTEADLIDLWQVFALKDQLPFTVEELPISHSQLSRQSKYLTHPVFNRYHSETELLRYLHQLESKDLSLTTSMIPLGSCTMKLNATSEMIPVTWAEFGKIHPFAPISQTRGYQILFQQLEAWLGEITGFAGISLQPNAGSQGEYAGLLVIHEYHQSRGEGHRNVCLIPQSAHGTNPASAVMCGMKVVGVACDDHGNIDVEDLKAKAEKHSHELSALMVTYPSTHGVFEEAIQEICAVIHSHGGQVYMDGANMNAQVGICRPGDFGADVCHLNLHKTFCIPHGGGGPGMGPIGVASHLVPFLPGHSVVRMGGDLGAVSAAPWGSASILVISWMYIIMMGADGLTEATKIAILNANYMAKKLESYYPVLYQGKNGLVAHECILDLRSLKKSAQIEIDDVAKRLMDYGFHAPTVSWPVAGTIMVEPTESESKQELDRFCDALIAIREEVAAIESGKMDIHDNVLKNAPHTAESLIIGEWNHPYSREQAAYPAPWNKEYKFWPSVGRIDAAFGDRNFVCSCLPMEAYS
>NZ_CP011456.1|WP_053539382.1|3093882_3094770_-|rhodanese-related-sulfurtransferase
MNQENQTVVAALYKFVNLPDCRELQVALLSLCQSQGIKGTILLAQEGINGTIAGSRQQIDTVLAFLRNDSRFADLEHKESYTEIPPFERLKIRLKPEIVTLGLPEVNPAEKVGTYVKPEDWNDLISNPEVTVIDTRNDYEVTIGTFKGAENPQTQIFRDFPEYVQKHLDPKKHKKVAMFCTGGIRCEKASSYLLSQGFEEIYHLKGGILKYLEEVPQTESLWEGECFIFDERITVSHNLETGNQELCFACGYPVSEKDKTSPEYEKSISCPHCFHTLTPEKRKRLQQKWKHYQTK
>NZ_CP011456.1|WP_053539383.1|3094997_3095630_-|DUF938-domain-containing-protein
MNTPADQRRFAPATQRNREPILELLLQILPQHGTILEIASGTGEHATFFSYHLAPRQWLPSDPNPELRASISAWTEFFPCKAMQPPLDLDASSPIWPVEKEIIPQPPISAIVNINMIHISPWSSCLGLMAGAGRILPPGGILYLYGPYKQNGEHTAPSNADFDESLQAQNPDWGVRNLEDVVKAAEAQNLILHQTYPMPANNLSLVFKHN
>NZ_CP011456.1|WP_053539384.1|3095746_3097156_+|1-acyl-sn-glycerol-3-phosphate-acyltransferase
MPKSIHSTQPPLKFIPQRHNPFVVKVVSWFLPLILRVRTRPWLPAGIVNIEAKNAEVLAKLYHEFQAGKVRFLIAFRHPEVEDPLSMLYLLSRIVPQAAREKGISLKYPVHSHFMYERGMTLWAGKWLGWLFSRLGGVPIRRGKRVDRNAIQMARELFANAEMPIAIAPEGGTNGHSSIVSPLEPGVAQLGFWCVEDLKKANREEQVFIIPIGIKYSYVNPPWQKIDWLLSKLEADSGLPGTELSTNGKEREGILYQRVLRLAEYLISEMEEFYRRFYHQDFPEIISSEVPINELLTTRLHRLMDTALKITEKYFNIQPQGNFIDRCRRLEDAGWNYIYRDDIADIPSLPPFKRGLADWVAEEADLKMQHMRIAESFVAVTADYILEKPTPERFAETLLLMFDMLSRIQNSTLPGRPRLGWKQAMIFVGEPINVNTRWENCQGNKQALRKGVSELTQDLQVMLEGLIQD
>NZ_CP011456.1|WP_053539385.1|3097620_3098682_+|D-alanine--D-alanine-ligase
MTKLRVGLLFGGRSGEHEVSIISAGAIAHALTLEENAKEYEVLPFYIQKNGSWQAGVTAQQVLTSGVPHEIPSITPNLWQFPPETQEVDLWFPVLHGPNGEDGTIQGLLTLMQVPFVGSGVLGSAIGMDKIAMKMAFAQAGLPQVKYIAVSREQVWSNACVFPKLCDEIEATLGYPCFVKPANLGSSVGIAKVRSRQELETALDNAATHDRRIIVEAGVVAREVECAVLGNENPKASVVGEITFNSDFYDYETKYTPGKADLFIPANLPDTVAQQIQDMALQAFAAVDAAGLSRVDFFYVEATGELFINEINTFPGFTSTSMYPQLWANTGIPFAQLVHQLIQLAIARHSPIN
>NZ_CP011456.1|WP_053539386.1|3098878_3099394_+|hypothetical-protein
MIYVINVMDNEQELKEKRNTGRILVNLLKKYPGIWFLSLLIIPIGFVIIAYNQLIYIGYVPQVKQAETPYIPVQSTISTFSDTSNPLPLWLIIAVIFCCSSGSLVIFYLLQNSKESTRTSQRHRNSQKMPSRKRYKPTNSKNLLIISPPEKIYPLHANTEFVKDRQDSRFL
>NZ_CP011456.1|WP_039200763.1|3099893_3100829_-|alpha/beta-hydrolase
MKDWWQDNFPQGRQNLIINDSQGYPIQIAYGEKGNGRPLILLHGLGSWSYNWRHSIEPLSRYFRVICCDFKCFGFSEKPVSRREETGHQIIELKRIIQALCDEPPIIVAESIGALISLGLAGKSPDLIGRLVVINAPIFTETLPHWSMGLLAQTPIEIIHAIDDLRLAYWFAPLVREVMGAERRKVLYNPSLLTEEDIYWITYPFIEIPGTLVKVAEELQIAAQEIENLRKNQPSMLKNIQNNLKNIECPTLVLWGDQDSWFPVSHGEKLHQHLPNSRLQILQNCYHDASTGSADVVNAAILEFLKETDFC
>NZ_CP011456.1|WP_039200762.1|3100848_3101352_-|DUF4112-domain-containing-protein
MPNSSEPFVITPDGYAPRLKRLRQFSGLLDNIITIPGTQIGVGLDPIIGLLPIGGDALGLIFSFYIIMEAAQLGVPVATLGRMVMNVIVDSLVGAIPMLGDLFDFAWRANNYNIILLEAALKSPHQNQKADNSFILIFSIGLFLLAIVLISIPVILIRILWQIFTGS
>NZ_CP011456.1|WP_039200761.1|3102114_3102576_+|hypothetical-protein
MTQDLTQKWLTEIQSLTQQMTKFQRERDEAWESSQKWRQLYNTEAEQRRVDAKMHQEAMVSIKAEVQKFSVVNGETGTDMTTAIQQEISQFNSIEELQTQLLEVIQERDCLLQALKLEQENHAQTRKSLTTALGDAIDSLARLRAGSKNTGGD

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Crispr_ID: NZ_CP011456_28

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011456_28

3372592-3372699

Orphan

Consensus_repeat	Method
AAATCCTCAAATCCTGGACATCCTGATT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP011456_28

>merge|NZ_CP011456|28|3372592-3372699|CRISPRCasFinder
AAATCCTCAAATCCTGGACATCCTGATTCAGACAAAAAAATCCTTCAAGAATAACCAACCATCATCAAATAACATCCTGTAAATTCTCAAATCCTGGACATCCTGATT

>NZ_CP011456|28|27|3372592-3372699|CRISPRCasFinder
AAATCCTCAAATCCTGGACATCCTGATT	CAGACAAAAAAATCCTTCAAGAATAACCAACCATCATCAAATAACATCCTGT
AAATTCTCAAATCCTGGACATCCTGATT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011456.1\|WP_053539555.1\|3372727_3373858_-\|CO2-hydration-protein	unknown	unknown	gnl\|CDD\|370890
NZ_CP011456.1\|WP_053539560.1\|3381482_3382292_+\|transferase	unknown	unknown	gnl\|CDD\|100051
NZ_CP011456.1\|WP_015080435.1\|3378776_3379121_+\|carbon-dioxide-concentrating-mechanism-protein-CcmK	unknown	unknown	gnl\|CDD\|132897
NZ_CP011456.1\|WP_053539557.1\|3375459_3375873_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_027400629.1\|3366058_3366340_+\|type-II-toxin-antitoxin-system-mRNA-interferase-toxin,-RelE/StbE-family	unknown	unknown	gnl\|CDD\|225583
NZ_CP011456.1\|WP_015080436.1\|3379127_3379433_+\|EutN/CcmL-family-microcompartment-protein	unknown	unknown	gnl\|CDD\|226942
NZ_CP011456.1\|WP_053539558.1\|3375861_3377718_-\|NAD(P)H-quinone-oxidoreductase-subunit-F	unknown	unknown	gnl\|CDD\|236008
NZ_CP011456.1\|WP_081424231.1\|3379371_3379623_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053539550.1\|3366342_3366651_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053539551.1\|3367650_3368208_+\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|226983
NZ_CP011456.1\|WP_053539556.1\|3373935_3375432_-\|NADH-quinone-oxidoreductase-subunit-M	unknown	unknown	gnl\|CDD\|235810
NZ_CP011456.1\|WP_053539559.1\|3379663_3381319_+\|cytochrome-C-biogenesis-protein-CcmM	unknown	unknown	gnl\|CDD\|100039
NZ_CP011456.1\|WP_039201895.1\|3368425_3368680_+\|type-II-toxin-antitoxin-system-prevent-host-death-family-antitoxin	unknown	unknown	gnl\|CDD\|171099
NZ_CP011456.1\|WP_081424230.1\|3368893_3369337_-\|polysaccharide-deacetylase-family-protein	unknown	unknown	gnl\|CDD\|213022
NZ_CP011456.1\|WP_028091145.1\|3366740_3366944_+\|type-II-toxin-antitoxin-system-HicB-family-antitoxin	unknown	unknown	gnl\|CDD\|224514
NZ_CP011456.1\|WP_053539553.1\|3369438_3370260_+\|Na+-transporting-NADH:ubiquinone-oxidoreductase,-subunit-NqrB	unknown	unknown	gnl\|CDD\|224718
NZ_CP011456.1\|WP_081424229.1\|3366940_3367102_+\|type-II-toxin-antitoxin-system-HicA-family-toxin	unknown	unknown	gnl\|CDD\|377942
NZ_CP011456.1\|WP_027401081.1\|3378374_3378683_+\|carbon-dioxide-concentrating-mechanism-protein-CcmK	unknown	unknown	gnl\|CDD\|132897
NZ_CP011456.1\|WP_053539552.1\|3368672_3368927_+\|Txe/YoeB-family-addiction-module-toxin	unknown	unknown	gnl\|CDD\|284238
NZ_CP011456.1\|WP_053539554.1\|3370290_3371664_+\|DUF2330-domain-containing-protein	unknown	unknown	gnl\|CDD\|226836

Protein	Function_ID	Function_description	E-value
NZ_CP011456.1\|WP_053539555.1\|3372727_3373858_-\|CO2-hydration-protein	gnl\|CDD\|370890	pfam10216, ChpXY, CO2 hydration protein (ChpXY). This small family of proteins includes paralogues ChpX and ChpY in Synechococcus sp. PCC7942 and other cyanobacteria, associated with distinct NAD(P)H dehydrogenase complexes. These proteins collectively enable light-dependent CO2 hydration and CO2 uptake; loss of both blocks growth at low CO2 concentrations.	0
NZ_CP011456.1\|WP_053539560.1\|3381482_3382292_+\|transferase	gnl\|CDD\|100051	cd04645, LbH_gamma_CA_like, Gamma carbonic anhydrase-like: This family is composed of gamma carbonic anhydrase (CA), Ferripyochelin Binding Protein (FBP), E. coli paaY protein, and similar proteins. CAs are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism, involving the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide, followed by the regeneration of the active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. They are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionary distinct groups - alpha, beta and gamma carbonic anhydrases - which show no significant sequence identity or structural similarity. Gamma CAs are trimeric enzymes with left-handed parallel beta helix (LbH) structural domain.	6.50468e-08
NZ_CP011456.1\|WP_015080435.1\|3378776_3379121_+\|carbon-dioxide-concentrating-mechanism-protein-CcmK	gnl\|CDD\|132897	cd07057, BMC_CcmK, Carbon dioxide concentrating mechanism (CcmK); Bacterial Micro-Compartment (BMC) domain. CcmK1-4 and CcmL proteins found in Synechocystis sp. strain PCC 6803 make up the beta carboxysome shell. These CcmK proteins have been shown to form hexameric units, while the CcmL proteins have been shown to form pentameric units. Together these proteins further assemble into the flat facets of the polyhedral carboxysome shell. The structures suggest that the central pores and the gaps between hexamers limit the transport of metabolites into and out of the the carboxysome.	6.69477e-46
NZ_CP011456.1\|WP_027400629.1\|3366058_3366340_+\|type-II-toxin-antitoxin-system-mRNA-interferase-toxin,-RelE/StbE-family	gnl\|CDD\|225583	COG3041, COG3041, Uncharacterized protein conserved in bacteria [Function unknown].	4.35534e-17
NZ_CP011456.1\|WP_015080436.1\|3379127_3379433_+\|EutN/CcmL-family-microcompartment-protein	gnl\|CDD\|226942	COG4576, CcmL, Carbon dioxide concentrating mechanism/carboxysome shell protein [Secondary metabolites biosynthesis, transport, and catabolism / Energy production and conversion].	3.27672e-40
NZ_CP011456.1\|WP_053539558.1\|3375861_3377718_-\|NAD(P)H-quinone-oxidoreductase-subunit-F	gnl\|CDD\|236008	PRK07390, PRK07390, NAD(P)H-quinone oxidoreductase subunit F; Validated.	0
NZ_CP011456.1\|WP_053539554.1\|3370290_3371664_+\|DUF2330-domain-containing-protein	gnl\|CDD\|226836	COG4402, COG4402, Uncharacterized protein conserved in bacteria [Function unknown].	0
NZ_CP011456.1\|WP_053539551.1\|3367650_3368208_+\|Uma2-family-endonuclease	gnl\|CDD\|226983	COG4636, Uma2, Endonuclease, Uma2 family (restriction endonuclease fold) [General function prediction only].	8.20094e-27
NZ_CP011456.1\|WP_053539559.1\|3379663_3381319_+\|cytochrome-C-biogenesis-protein-CcmM	gnl\|CDD\|100039	cd00710, LbH_gamma_CA, Gamma carbonic anhydrases (CA): Carbonic anhydrases are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism, involving the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide, followed by the regeneration of the active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. They are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three distinct groups of carbonic anhydrases - alpha, beta and gamma - which show no significant sequence identity or structural similarity. Gamma CAs are homotrimeric enzymes, with each subunit containing a left-handed parallel beta helix (LbH) structural domain.	1.12097e-85
NZ_CP011456.1\|WP_039201895.1\|3368425_3368680_+\|type-II-toxin-antitoxin-system-prevent-host-death-family-antitoxin	gnl\|CDD\|171099	PRK11409, PRK11409, YoeB-YefM toxin-antitoxin system antitoxin YefM.	2.01588e-19
NZ_CP011456.1\|WP_081424230.1\|3368893_3369337_-\|polysaccharide-deacetylase-family-protein	gnl\|CDD\|213022	cd10917, CE4_NodB_like_6s_7s, Catalytic NodB homology domain of rhizobial NodB-like proteins. This family belongs to the large and functionally diverse carbohydrate esterase 4 (CE4) superfamily, whose members show strong sequence similarity with some variability due to their distinct carbohydrate substrates. It includes many rhizobial NodB chitooligosaccharide N-deacetylase (EC 3.5.1.-)-like proteins, mainly from bacteria and eukaryotes, such as chitin deacetylases (EC 3.5.1.41), bacterial peptidoglycan N-acetylglucosamine deacetylases (EC 3.5.1.-), and acetylxylan esterases (EC 3.1.1.72), which catalyze the N- or O-deacetylation of substrates such as acetylated chitin, peptidoglycan, and acetylated xylan. All members of this family contain a catalytic NodB homology domain with the same overall topology and a deformed (beta/alpha)8 barrel fold with 6- or 7 strands. Their catalytic activity is dependent on the presence of a divalent cation, preferably cobalt or zinc, and they employ a conserved His-His-Asp zinc-binding triad closely associated with the conserved catalytic base (aspartic acid) and acid (histidine) to carry out acid/base catalysis. Several family members show diversity both in metal ion specificities and in the residues that coordinate the metal.	3.24976e-40
NZ_CP011456.1\|WP_028091145.1\|3366740_3366944_+\|type-II-toxin-antitoxin-system-HicB-family-antitoxin	gnl\|CDD\|224514	COG1598, COG1598, Predicted nuclease of the RNAse H fold, HicB family [General function prediction only].	5.8888e-12
NZ_CP011456.1\|WP_053539553.1\|3369438_3370260_+\|Na+-transporting-NADH:ubiquinone-oxidoreductase,-subunit-NqrB	gnl\|CDD\|224718	COG1805, NqrB, Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrB [Energy production and conversion].	3.03919e-60
NZ_CP011456.1\|WP_053539556.1\|3373935_3375432_-\|NADH-quinone-oxidoreductase-subunit-M	gnl\|CDD\|235810	PRK06473, PRK06473, NADH-quinone oxidoreductase subunit M.	0
NZ_CP011456.1\|WP_027401081.1\|3378374_3378683_+\|carbon-dioxide-concentrating-mechanism-protein-CcmK	gnl\|CDD\|132897	cd07057, BMC_CcmK, Carbon dioxide concentrating mechanism (CcmK); Bacterial Micro-Compartment (BMC) domain. CcmK1-4 and CcmL proteins found in Synechocystis sp. strain PCC 6803 make up the beta carboxysome shell. These CcmK proteins have been shown to form hexameric units, while the CcmL proteins have been shown to form pentameric units. Together these proteins further assemble into the flat facets of the polyhedral carboxysome shell. The structures suggest that the central pores and the gaps between hexamers limit the transport of metabolites into and out of the the carboxysome.	8.52927e-43
NZ_CP011456.1\|WP_053539552.1\|3368672_3368927_+\|Txe/YoeB-family-addiction-module-toxin	gnl\|CDD\|284238	pfam06769, YoeB_toxin, YoeB-like toxin of bacterial type II toxin-antitoxin system. YoeB_toxin is a family of bacterial toxins that forms one component of the type II toxin-antitoxin system in E. coli whose antitoxin is represented by YefM, found in pfam02604. The plasmid encoded Axe-Txe proteins in Enterococcus faecium act as an antitoxin-toxin pair. When the plasmid is lost, the antitoxin is degraded relatively quickly by host enzymes. This allows the toxin to interact with its intracellular target, thus killing the cell or impeding cell growth. These toxins are highly potent protein synthesis inhibitors, specifically blocking the initiation of translation. In the case of YoeB, it binds to the 50 S ribosomal subunit in 70 S ribosomes and interacts with the A site leading to mRNA cleavage at this site. As a result, the 3'-end portion of the mRNA is released from ribosomes, and translation initiation is effectively inhibited.	2.02076e-40
NZ_CP011456.1\|WP_081424229.1\|3366940_3367102_+\|type-II-toxin-antitoxin-system-HicA-family-toxin	gnl\|CDD\|377942	pfam07927, HicA_toxin, HicA toxin of bacterial toxin-antitoxin,. HicA_toxin is a bacterial family of toxins that act as mRNA interferases. The antitoxin that neutralizes this is family HicB, pfam15919.	2.52146e-05

>NZ_CP011456.1|WP_053539554.1|3370290_3371664_+|DUF2330-domain-containing-protein
MQLLRLFMPLISALLAVLCFVPTAWAFCGFYVAKADTKLYNQASQVILARDGNRTVLTMANDFQGDVKDFAVVIPVPTVLKKEQVHVAQAKIIERLDAFSAPRLVEYFDSDPCAQDNIMTDMPAPQAAARMRGAENSMKKDSSLGVTVEAKFNVGEYDIVILSAKESGGLEIWLNRNGYKIPKGAKELLKPYIRSSMKFFVAKVNLDKFAELGYQLLRPLQISYESLKFMLPIRLGMINATKEQDLIVYILSPQGQAEITNYRTVKVPSDVNIPIFVKNEFGDFYKSMFQTSYTKEDKKVGFLEYAWDMSSCDPCSAEPLNNEELKQAGVFWLDNNSSDRPVSPRFRSRFPSSSVFITRLHVRYTRNKFPEDLMFQATSQRDSFQGRYILQHPFTGNLECSAGRQYKSSLNQRFEKEAQTLARLTNWNIQNIRQKMQLSVGNISTSWWDNFLAWFGL
>NZ_CP011456.1|WP_053539553.1|3369438_3370260_+|Na+-transporting-NADH:ubiquinone-oxidoreductase,-subunit-NqrB
MTLCKDIRDYQILFLSLFLILGIATRDWTLHPEFIGVAIASCIITQIICSLLTKSEKTIPVINIRSPLITSLGLSLLLRADHWSTMALAGFAAIASKFIFQFGEKHFFNPANFGIIAVLTLTNDAWVSPGQWGEEWWYALLFVGTGGMILQRIGRWDTTAAFLGAYSLLAAIRNMWLGWTWDVYFHHLMSGSLLLFSLFMVTDPRSIPNAPMSRILWAISIALLTFILRNFFFIPTAVFWALFALAPLTIFLDRFWVTPRFSWWQQPELSAEK
>NZ_CP011456.1|WP_081424230.1|3368893_3369337_-|polysaccharide-deacetylase-family-protein
MEFAPLFPLVYRLLQPTFPHCLWCGNSNSKTIALTFDDGPHPQYTPEVLSVLKRYNITASFFWLGNCVNRFPETAKTVSTQGHWIGLHGYEHDSFPLLSSTQLKQSLEKTQVAIYNACNLTPEQVRDVRPPNGFFTPQTLQYEIIVR
>NZ_CP011456.1|WP_053539552.1|3368672_3368927_+|Txe/YoeB-family-addiction-module-toxin
MRKLAWGSKAWKDYLYWQSQDKKTLKRINQLIQDTLSDPFEGIGKPEPLKENLSGFWSRRIDETNRLIYAIDDDYLTIISYCNV
>NZ_CP011456.1|WP_039201895.1|3368425_3368680_+|type-II-toxin-antitoxin-system-prevent-host-death-family-antitoxin
MNIVNFSEARNNFKSVLDTVANDKNCTVIVRRDAEDAVVMSKSYYDSLMETVYLLKSPANAQHLEEAIAEYKAGKTQEHDLIDA
>NZ_CP011456.1|WP_053539551.1|3367650_3368208_+|Uma2-family-endonuclease
MTIAAIKPTTIEEFLQLPETEPASEFIHGQIKQKPMPQGEHSQLQINLCETINQITKPQKIAKAFPELRCVFGGLAIVPDIAVFRWERIPRLPSGRIANRFEIHPDWAIEILSPDQRYKQVLAKLLHCAEYGTELGWLLDPEDESILVVDSDRRVRELKNSDHLPVITGVELDITVQEVFSWLIF
>NZ_CP011456.1|WP_081424229.1|3366940_3367102_+|type-II-toxin-antitoxin-system-HicA-family-toxin
MKSISGKKLCKIVENKGWILKKITGSHHIYEKPDESKIIGSSVIFMENLVQNH
>NZ_CP011456.1|WP_028091145.1|3366740_3366944_+|type-II-toxin-antitoxin-system-HicB-family-antitoxin
MKIKAIIYPAQEGGYWAEVPALPGCITEGDTMEELINNLQDAIQGWLEVANEIQKPDPISQVIEIAV
>NZ_CP011456.1|WP_053539550.1|3366342_3366651_+|hypothetical-protein
MIIGLERSLFGVWRAIAKRCCKQFAFWGMEGDSEALLQAVRFLGYGRAIAKRCCKQFAFWGVGGDSEALLQAVRFLGYGRAIAKRCCKQFAFWGVGGRSSQC
>NZ_CP011456.1|WP_027400629.1|3366058_3366340_+|type-II-toxin-antitoxin-system-mRNA-interferase-toxin,-RelE/StbE-family
MSFVLLRSSAFIRSARKILKKQPEITENFQSILELLSTDPFHPRLKTHKLKGDLQDSWACSAGYDLRIIFTFVEHEESQAILLESVGTHDEVY
>NZ_CP011456.1|WP_053539555.1|3372727_3373858_-|CO2-hydration-protein
MITTKNSPTYNPLAEYIQRLQTGQVLLKDSPENVLEVVGILKSYGVVLDAYSKNLIYIAEHQFLVFFPFFKYFDGDISVAKLFRHLWHDRINFEYAEYCMKTMMWHGGGGLDAYLDTQEFHDRAKAVIAAKFKYNPLIWGVNELFPEFLIEQLRVSAYYTGLGQFWRVMADMFLNLSDRYDNGEIKTIPQVVEHIKLALVADAMKPITYSVKIGDKVYDLIPQSVGLTFLADTAIPYVEAVFFRGTPFLGTVSLNAQAYQVPPDLSRFQYGALYADPLPIGGAGIPPTLLMQDMRHYLPEYLHNIYRRSLRGEDDLRVQICMSFQKSMFCVTSAAILGLLPYPLDSQDPSEQKHNQVYLEKWMSRLENSRLLEVNK
>NZ_CP011456.1|WP_053539556.1|3373935_3375432_-|NADH-quinone-oxidoreductase-subunit-M
MLSTLILLPLIGAAFIGFYPFTISGKLSRIIAFVFSVIIFLWSIFLGIQFNPGEIGQQFAESLPWIDAIGLNYNLGIDGLSLPLLILNGLLTCIAIYSSDESQQRPRFYYSLILLLSAGVIGAFLAQDLLLFFLFYELELIPLYLLIAIWGGEKRGYAATKFLIYTAFSGIVILASFLGMVWLSGSPSFGLATLNAQSLPLATQILLLAGILVGFGIKIPLVPFHTWLPDAHVEASTPISVLLAGILLKLGTYGLLRFGMNLLPDAWAYAAPWLATWAVVSVLFGASCAIAQTDMKKMVAYSSIGHMGYVLLAAAASTPLSVLGAVMQMISHGLISAMLFLLVGVVYKKAGSRDLNVIRGLLNPERGLPVIGSLMIFAVMASAGIPGMVGFISEFIVFRGSFAIFPVQTLLAMLGNGLTAVYFLILLNRAFFGRLSAAVTNLPRVYWSDRIPAIILAVAIVIFGIQPNWLVYYTQATITTMVKTNNHHLVANREPLDS
>NZ_CP011456.1|WP_053539557.1|3375459_3375873_+|hypothetical-protein
MGEVGEVGEVGEVGEVGEVGEVGEVGEVGEVGEVGEVGEVGEVGEVGEVGEVGEVGEVGEVGEVGEVGEVGEVGEVGEVGEVGEVGEVGEVGEVGEEYYQLPITHYQLPITNYQLPITNYQLPITHYQLPITHYLKR
>NZ_CP011456.1|WP_053539558.1|3375861_3377718_-|NAD(P)H-quinone-oxidoreductase-subunit-F
MNEFLFLTSCFVPLYSLLGAILTLPWSIGIIQRTGPRPAAYLNLLTTILGFVHSFLVFKDIWNREQENLVITWFQAADFQLSFALEISVVSVGATVLITGLSLLAQIYALGYMEKDWSLARFFGLVGFFEAALSGLAISDSLFLSYALLEVLTLSTYLLVGFWYAQPLVVTAARDAFLTKRVGDLLLLMAVVTLSTLAGSLNFSDLYEWAQTADLNPVTSTLLCLGLIAGPAGKCAQFPLHLWLDEAMEGPNPASVMRNSLVVAGGAYFLYKVQPLLYLSPIALNTLVVVGVMTAVGATLVSLAQIDIKRSLSHSTSAYMGLVFLAVGLEQGGVALMLLLSHAIAKALLFMSSGSVIYTTQTQDLTEMGGLWSKMPATTTAFIVGSAGMVTLLPLGSFWAMLAWADGLVKISPWVIVVLILVNGLTALNLTRVFRLVFWGQPQPKTRRAPEVAWPMALPMVTLTILTLLLPLMLQQWYLLPSWESLDWYVVGSLVASTIAGVTIGATIYLHKAWSRSRILIWRLIQDLLGYDFYIDRIYRLTIVSAVALLSRISAWSDRFLVDGLVNLVGFAAIFSGQSLKYSISGQSQGYMLTILVFISILGFLISLSLGLFEKLPF
>NZ_CP011456.1|WP_027401081.1|3378374_3378683_+|carbon-dioxide-concentrating-mechanism-protein-CcmK
MPIAVGMIETKGFPAVVEAADAMVKAARVTLVGYEKIGSARVTVIVRGDVSEVQASVAAGIEAAKRVNGGEVVSTHIIARPHENLEYVLPIRYTEAVEQFRA
>NZ_CP011456.1|WP_015080435.1|3378776_3379121_+|carbon-dioxide-concentrating-mechanism-protein-CcmK
MSIAVGMVETLGFPAVVEAADAMVKAARVTLVGYEKIGSGRVTVIVRGDVSEVQASVGAGVESVKRVNGGQVLSTHIIARPHENLEYVLPIRYTEDVEQFREGVNTIRPFGRRP
>NZ_CP011456.1|WP_015080436.1|3379127_3379433_+|EutN/CcmL-family-microcompartment-protein
MQIARVRGTVTSTQKDPSLRGVKLLMLQLIDENGNLLPVYEVAADNSVGAGVDEWVLVSRGSAARQLSGNEQRPLDAAVVAIIDTIYVEDRVIYSKKDQYR
>NZ_CP011456.1|WP_081424231.1|3379371_3379623_-|hypothetical-protein
MVIGQWSLVIGHWSLVIGHWSLVIGHWSVAYFHQLLPLTSYLLPLTSYLLPLASCLLPLASVLTIYTGLSCCKLHDLQRKWCL
>NZ_CP011456.1|WP_053539559.1|3379663_3381319_+|cytochrome-C-biogenesis-protein-CcmM
MVVRSTAAPPTPWSRSLAEPKINETAFVHSSCNLIGDVNIGANVIVAPGTSIRADEGTPFCVSENTNIQDGVVIHGLEQGRVVGDDGKKYSVWVGKSASITHMALIHGPAYVGDSCFIGFRSTVFNARVGAGCIVMMHALIQDVEIPPGKYVASGSIITTQQQADRLPDVQAQDQEFAHHVVGINQALRAGYHCAADSKCIAPIRDELNLSGAKSYTSIEVEELERSSDVVSYSLGAETVDQLRYLLEQGFKIGTEHVDQRRFRTGSWQSCQAIETRSLGEAVAAVESCLRDHSGEYVRLFGIDSNRRRVLETIVQRPEGVVAGTSSFKAPAAASAGSYNGNGNGNGVGSAKLSAETVDQIRQLLAGGFKIGTEHVDERRFRTGSWNSCEPIQSNSAQAVVAALEECIETHQGEYVRLIGIDTKAKRRVLEAIIQRPNGQVASSGSAKSFTSTSSATATATATSTRLTAEIVGQLRQLLSSGAKIAVEHVDQRRFRTGTWTVAGQIQATSEREAIAALEGYVSEYPGEYVRLVGTDPKAKRRVLEAIIQRP
>NZ_CP011456.1|WP_053539560.1|3381482_3382292_+|transferase
MSVSLLRLGDRFDAHIHGDVIIHPSAVIAPGVILQAATNSTIVIGAGVCLGMGSILQVSEGILEIEAGANLGAGFLMVGEGKIGANACIGAATTVFNCSVAPGQVIPSGSILGDTSRQIVEPSAVQPESTNSQPEKPEELAEQLESPHSQPEKPEEQEKVFSSTQLSVAAFLEFKHQSTPVSPPSPTPKSQSPPESETAVASDSTPVETPLPESTETTSENLEPSESDLEAHNIFGTQIYGQGSINRLLSTLFPHRQSLGNENSHNSSG

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Crispr_ID: NZ_CP011456_29

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011456_29

3381874-3381950

Orphan

Consensus_repeat	Method
ATTCTCAACCAGAGAAACCAGAGGAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP011456_29

>merge|NZ_CP011456|29|3381874-3381950|CRISPRCasFinder
ATTCTCAACCAGAGAAACCAGAGGAATTAGCCGAACAACTTGAATCTCCTCATTCTCAACCAGAGAAACCAGAGGAA

>NZ_CP011456|29|28|3381874-3381950|CRISPRCasFinder
ATTCTCAACCAGAGAAACCAGAGGAA	TTAGCCGAACAACTTGAATCTCCTC
ATTCTCAACCAGAGAAACCAGAGGAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011456.1\|WP_053539555.1\|3372727_3373858_-\|CO2-hydration-protein	unknown	unknown	gnl\|CDD\|370890
NZ_CP011456.1\|WP_027401081.1\|3378374_3378683_+\|carbon-dioxide-concentrating-mechanism-protein-CcmK	unknown	unknown	gnl\|CDD\|132897
NZ_CP011456.1\|WP_053539561.1\|3382392_3383181_+\|BMC-domain-containing-protein	unknown	unknown	gnl\|CDD\|226943
NZ_CP011456.1\|WP_015080435.1\|3378776_3379121_+\|carbon-dioxide-concentrating-mechanism-protein-CcmK	unknown	unknown	gnl\|CDD\|132897
NZ_CP011456.1\|WP_053539566.1\|3389970_3390813_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227078
NZ_CP011456.1\|WP_053539568.1\|3394545_3394806_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053539564.1\|3388285_3389227_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176111
NZ_CP011456.1\|WP_053539565.1\|3389321_3389750_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053539558.1\|3375861_3377718_-\|NAD(P)H-quinone-oxidoreductase-subunit-F	unknown	unknown	gnl\|CDD\|236008
NZ_CP011456.1\|WP_081424231.1\|3379371_3379623_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053539557.1\|3375459_3375873_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_081424373.1\|3387873_3388149_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053539562.1\|3383267_3387479_-\|DEAD/DEAH-box-helicase	unknown	unknown	gnl\|CDD\|223627
NZ_CP011456.1\|WP_053541295.1\|3390794_3392090_+\|O-antigen-ligase-family-protein	unknown	unknown	gnl\|CDD\|225844
NZ_CP011456.1\|WP_053539559.1\|3379663_3381319_+\|cytochrome-C-biogenesis-protein-CcmM	unknown	unknown	gnl\|CDD\|100039
NZ_CP011456.1\|WP_081424374.1\|3392295_3392961_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053539556.1\|3373935_3375432_-\|NADH-quinone-oxidoreductase-subunit-M	unknown	unknown	gnl\|CDD\|235810
NZ_CP011456.1\|WP_053539567.1\|3392964_3394308_-\|protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP011456.1\|WP_015080436.1\|3379127_3379433_+\|EutN/CcmL-family-microcompartment-protein	unknown	unknown	gnl\|CDD\|226942
NZ_CP011456.1\|WP_053539554.1\|3370290_3371664_+\|DUF2330-domain-containing-protein	unknown	unknown	gnl\|CDD\|226836

Protein	Function_ID	Function_description	E-value
NZ_CP011456.1\|WP_053539562.1\|3383267_3387479_-\|DEAD/DEAH-box-helicase	gnl\|CDD\|223627	COG0553, HepA, Superfamily II DNA/RNA helicases, SNF2 family [Transcription / DNA replication, recombination, and repair].	1.11607e-113
NZ_CP011456.1\|WP_053539561.1\|3382392_3383181_+\|BMC-domain-containing-protein	gnl\|CDD\|226943	COG4577, CcmK, Carbon dioxide concentrating mechanism/carboxysome shell protein [Secondary metabolites biosynthesis, transport, and catabolism / Energy production and conversion].	1.48653e-45
NZ_CP011456.1\|WP_015080435.1\|3378776_3379121_+\|carbon-dioxide-concentrating-mechanism-protein-CcmK	gnl\|CDD\|132897	cd07057, BMC_CcmK, Carbon dioxide concentrating mechanism (CcmK); Bacterial Micro-Compartment (BMC) domain. CcmK1-4 and CcmL proteins found in Synechocystis sp. strain PCC 6803 make up the beta carboxysome shell. These CcmK proteins have been shown to form hexameric units, while the CcmL proteins have been shown to form pentameric units. Together these proteins further assemble into the flat facets of the polyhedral carboxysome shell. The structures suggest that the central pores and the gaps between hexamers limit the transport of metabolites into and out of the the carboxysome.	6.69477e-46
NZ_CP011456.1\|WP_053539566.1\|3389970_3390813_+\|hypothetical-protein	gnl\|CDD\|227078	COG4735, COG4735, Uncharacterized protein conserved in bacteria [Function unknown].	5.16532e-84
NZ_CP011456.1\|WP_053539564.1\|3388285_3389227_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176111	cd08419, PBP2_CbbR_RubisCO_like, The C-terminal substrate binding of LysR-type transcriptional regulator (CbbR) of RubisCO operon, which is involved in the carbon dioxide fixation, contains the type 2 periplasmic binding fold. CbbR, a LysR-type transcriptional regulator, is required to activate expression of RubisCO, one of two unique enzymes in the Calvin-Benson-Bassham (CBB) cycle pathway. All plants, cyanobacteria, and many autotrophic bacteria use the CBB cycle to fix carbon dioxide. Thus, this cycle plays an essential role in assimilating CO2 into organic carbon on earth. The key CBB cycle enzyme is ribulose 1,5-bisphosphate carboxylase/oxygenase (RubisCO), which catalyzes the actual CO2 fixation reaction. The CO2 concentration affects the expression of RubisCO genes. It has also shown that NADPH enhances the DNA-binding ability of the CbbR. RubisCO is composed of eight large (CbbL) and eight small subunits (CbbS). The topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	2.02491e-112
NZ_CP011456.1\|WP_053539567.1\|3392964_3394308_-\|protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	1.63599e-70
NZ_CP011456.1\|WP_053539558.1\|3375861_3377718_-\|NAD(P)H-quinone-oxidoreductase-subunit-F	gnl\|CDD\|236008	PRK07390, PRK07390, NAD(P)H-quinone oxidoreductase subunit F; Validated.	0
NZ_CP011456.1\|WP_053539555.1\|3372727_3373858_-\|CO2-hydration-protein	gnl\|CDD\|370890	pfam10216, ChpXY, CO2 hydration protein (ChpXY). This small family of proteins includes paralogues ChpX and ChpY in Synechococcus sp. PCC7942 and other cyanobacteria, associated with distinct NAD(P)H dehydrogenase complexes. These proteins collectively enable light-dependent CO2 hydration and CO2 uptake; loss of both blocks growth at low CO2 concentrations.	0
NZ_CP011456.1\|WP_053541295.1\|3390794_3392090_+\|O-antigen-ligase-family-protein	gnl\|CDD\|225844	COG3307, RfaL, Lipid A core - O-antigen ligase and related enzymes [Cell envelope biogenesis, outer membrane].	1.30468e-11
NZ_CP011456.1\|WP_053539559.1\|3379663_3381319_+\|cytochrome-C-biogenesis-protein-CcmM	gnl\|CDD\|100039	cd00710, LbH_gamma_CA, Gamma carbonic anhydrases (CA): Carbonic anhydrases are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism, involving the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide, followed by the regeneration of the active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. They are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three distinct groups of carbonic anhydrases - alpha, beta and gamma - which show no significant sequence identity or structural similarity. Gamma CAs are homotrimeric enzymes, with each subunit containing a left-handed parallel beta helix (LbH) structural domain.	1.12097e-85
NZ_CP011456.1\|WP_053539556.1\|3373935_3375432_-\|NADH-quinone-oxidoreductase-subunit-M	gnl\|CDD\|235810	PRK06473, PRK06473, NADH-quinone oxidoreductase subunit M.	0
NZ_CP011456.1\|WP_027401081.1\|3378374_3378683_+\|carbon-dioxide-concentrating-mechanism-protein-CcmK	gnl\|CDD\|132897	cd07057, BMC_CcmK, Carbon dioxide concentrating mechanism (CcmK); Bacterial Micro-Compartment (BMC) domain. CcmK1-4 and CcmL proteins found in Synechocystis sp. strain PCC 6803 make up the beta carboxysome shell. These CcmK proteins have been shown to form hexameric units, while the CcmL proteins have been shown to form pentameric units. Together these proteins further assemble into the flat facets of the polyhedral carboxysome shell. The structures suggest that the central pores and the gaps between hexamers limit the transport of metabolites into and out of the the carboxysome.	8.52927e-43
NZ_CP011456.1\|WP_015080436.1\|3379127_3379433_+\|EutN/CcmL-family-microcompartment-protein	gnl\|CDD\|226942	COG4576, CcmL, Carbon dioxide concentrating mechanism/carboxysome shell protein [Secondary metabolites biosynthesis, transport, and catabolism / Energy production and conversion].	3.27672e-40
NZ_CP011456.1\|WP_053539554.1\|3370290_3371664_+\|DUF2330-domain-containing-protein	gnl\|CDD\|226836	COG4402, COG4402, Uncharacterized protein conserved in bacteria [Function unknown].	0

>NZ_CP011456.1|WP_053539559.1|3379663_3381319_+|cytochrome-C-biogenesis-protein-CcmM
MVVRSTAAPPTPWSRSLAEPKINETAFVHSSCNLIGDVNIGANVIVAPGTSIRADEGTPFCVSENTNIQDGVVIHGLEQGRVVGDDGKKYSVWVGKSASITHMALIHGPAYVGDSCFIGFRSTVFNARVGAGCIVMMHALIQDVEIPPGKYVASGSIITTQQQADRLPDVQAQDQEFAHHVVGINQALRAGYHCAADSKCIAPIRDELNLSGAKSYTSIEVEELERSSDVVSYSLGAETVDQLRYLLEQGFKIGTEHVDQRRFRTGSWQSCQAIETRSLGEAVAAVESCLRDHSGEYVRLFGIDSNRRRVLETIVQRPEGVVAGTSSFKAPAAASAGSYNGNGNGNGVGSAKLSAETVDQIRQLLAGGFKIGTEHVDERRFRTGSWNSCEPIQSNSAQAVVAALEECIETHQGEYVRLIGIDTKAKRRVLEAIIQRPNGQVASSGSAKSFTSTSSATATATATSTRLTAEIVGQLRQLLSSGAKIAVEHVDQRRFRTGTWTVAGQIQATSEREAIAALEGYVSEYPGEYVRLVGTDPKAKRRVLEAIIQRP
>NZ_CP011456.1|WP_081424231.1|3379371_3379623_-|hypothetical-protein
MVIGQWSLVIGHWSLVIGHWSLVIGHWSVAYFHQLLPLTSYLLPLTSYLLPLASCLLPLASVLTIYTGLSCCKLHDLQRKWCL
>NZ_CP011456.1|WP_015080436.1|3379127_3379433_+|EutN/CcmL-family-microcompartment-protein
MQIARVRGTVTSTQKDPSLRGVKLLMLQLIDENGNLLPVYEVAADNSVGAGVDEWVLVSRGSAARQLSGNEQRPLDAAVVAIIDTIYVEDRVIYSKKDQYR
>NZ_CP011456.1|WP_015080435.1|3378776_3379121_+|carbon-dioxide-concentrating-mechanism-protein-CcmK
MSIAVGMVETLGFPAVVEAADAMVKAARVTLVGYEKIGSGRVTVIVRGDVSEVQASVGAGVESVKRVNGGQVLSTHIIARPHENLEYVLPIRYTEDVEQFREGVNTIRPFGRRP
>NZ_CP011456.1|WP_027401081.1|3378374_3378683_+|carbon-dioxide-concentrating-mechanism-protein-CcmK
MPIAVGMIETKGFPAVVEAADAMVKAARVTLVGYEKIGSARVTVIVRGDVSEVQASVAAGIEAAKRVNGGEVVSTHIIARPHENLEYVLPIRYTEAVEQFRA
>NZ_CP011456.1|WP_053539558.1|3375861_3377718_-|NAD(P)H-quinone-oxidoreductase-subunit-F
MNEFLFLTSCFVPLYSLLGAILTLPWSIGIIQRTGPRPAAYLNLLTTILGFVHSFLVFKDIWNREQENLVITWFQAADFQLSFALEISVVSVGATVLITGLSLLAQIYALGYMEKDWSLARFFGLVGFFEAALSGLAISDSLFLSYALLEVLTLSTYLLVGFWYAQPLVVTAARDAFLTKRVGDLLLLMAVVTLSTLAGSLNFSDLYEWAQTADLNPVTSTLLCLGLIAGPAGKCAQFPLHLWLDEAMEGPNPASVMRNSLVVAGGAYFLYKVQPLLYLSPIALNTLVVVGVMTAVGATLVSLAQIDIKRSLSHSTSAYMGLVFLAVGLEQGGVALMLLLSHAIAKALLFMSSGSVIYTTQTQDLTEMGGLWSKMPATTTAFIVGSAGMVTLLPLGSFWAMLAWADGLVKISPWVIVVLILVNGLTALNLTRVFRLVFWGQPQPKTRRAPEVAWPMALPMVTLTILTLLLPLMLQQWYLLPSWESLDWYVVGSLVASTIAGVTIGATIYLHKAWSRSRILIWRLIQDLLGYDFYIDRIYRLTIVSAVALLSRISAWSDRFLVDGLVNLVGFAAIFSGQSLKYSISGQSQGYMLTILVFISILGFLISLSLGLFEKLPF
>NZ_CP011456.1|WP_053539557.1|3375459_3375873_+|hypothetical-protein
MGEVGEVGEVGEVGEVGEVGEVGEVGEVGEVGEVGEVGEVGEVGEVGEVGEVGEVGEVGEVGEVGEVGEVGEVGEVGEVGEVGEVGEVGEVGEVGEEYYQLPITHYQLPITNYQLPITNYQLPITHYQLPITHYLKR
>NZ_CP011456.1|WP_053539556.1|3373935_3375432_-|NADH-quinone-oxidoreductase-subunit-M
MLSTLILLPLIGAAFIGFYPFTISGKLSRIIAFVFSVIIFLWSIFLGIQFNPGEIGQQFAESLPWIDAIGLNYNLGIDGLSLPLLILNGLLTCIAIYSSDESQQRPRFYYSLILLLSAGVIGAFLAQDLLLFFLFYELELIPLYLLIAIWGGEKRGYAATKFLIYTAFSGIVILASFLGMVWLSGSPSFGLATLNAQSLPLATQILLLAGILVGFGIKIPLVPFHTWLPDAHVEASTPISVLLAGILLKLGTYGLLRFGMNLLPDAWAYAAPWLATWAVVSVLFGASCAIAQTDMKKMVAYSSIGHMGYVLLAAAASTPLSVLGAVMQMISHGLISAMLFLLVGVVYKKAGSRDLNVIRGLLNPERGLPVIGSLMIFAVMASAGIPGMVGFISEFIVFRGSFAIFPVQTLLAMLGNGLTAVYFLILLNRAFFGRLSAAVTNLPRVYWSDRIPAIILAVAIVIFGIQPNWLVYYTQATITTMVKTNNHHLVANREPLDS
>NZ_CP011456.1|WP_053539555.1|3372727_3373858_-|CO2-hydration-protein
MITTKNSPTYNPLAEYIQRLQTGQVLLKDSPENVLEVVGILKSYGVVLDAYSKNLIYIAEHQFLVFFPFFKYFDGDISVAKLFRHLWHDRINFEYAEYCMKTMMWHGGGGLDAYLDTQEFHDRAKAVIAAKFKYNPLIWGVNELFPEFLIEQLRVSAYYTGLGQFWRVMADMFLNLSDRYDNGEIKTIPQVVEHIKLALVADAMKPITYSVKIGDKVYDLIPQSVGLTFLADTAIPYVEAVFFRGTPFLGTVSLNAQAYQVPPDLSRFQYGALYADPLPIGGAGIPPTLLMQDMRHYLPEYLHNIYRRSLRGEDDLRVQICMSFQKSMFCVTSAAILGLLPYPLDSQDPSEQKHNQVYLEKWMSRLENSRLLEVNK
>NZ_CP011456.1|WP_053539554.1|3370290_3371664_+|DUF2330-domain-containing-protein
MQLLRLFMPLISALLAVLCFVPTAWAFCGFYVAKADTKLYNQASQVILARDGNRTVLTMANDFQGDVKDFAVVIPVPTVLKKEQVHVAQAKIIERLDAFSAPRLVEYFDSDPCAQDNIMTDMPAPQAAARMRGAENSMKKDSSLGVTVEAKFNVGEYDIVILSAKESGGLEIWLNRNGYKIPKGAKELLKPYIRSSMKFFVAKVNLDKFAELGYQLLRPLQISYESLKFMLPIRLGMINATKEQDLIVYILSPQGQAEITNYRTVKVPSDVNIPIFVKNEFGDFYKSMFQTSYTKEDKKVGFLEYAWDMSSCDPCSAEPLNNEELKQAGVFWLDNNSSDRPVSPRFRSRFPSSSVFITRLHVRYTRNKFPEDLMFQATSQRDSFQGRYILQHPFTGNLECSAGRQYKSSLNQRFEKEAQTLARLTNWNIQNIRQKMQLSVGNISTSWWDNFLAWFGL
>NZ_CP011456.1|WP_053539561.1|3382392_3383181_+|BMC-domain-containing-protein
METYNQSALSNIHAPRRRDSLKDTALGLVSTLSFPAIVGTADMMLKSAGVHLVGYEKIGSGHCTAIVRGGIADVRLAVEAGVQTAEQFGQLVSSLVIARPYPNLDIILPINRLTRFMGDGGGYSRLSNQAIGLVETRGFPAMVGACDAMLKAADVQLASYEKIGAGLCTAIIRGSVANVAVAVEAGMFEAERIGELNAVMVIPRPLDELEETLPVASCWMEERQPVNIPINIKDKITDVEAVELPDLAKLPVRVKEEIWNDE
>NZ_CP011456.1|WP_053539562.1|3383267_3387479_-|DEAD/DEAH-box-helicase
MSDFNANSTQLRTQLAKKYFDLSPAIQKIIQLFSIIYAPIDKSSFLSCLSQTAALDEKNRPWTATTLNYQIEKLVIALLLVKENKSGPECHPLLTEIATRHAVETGKFDILVKAVEEKLPVSNHWNKNSRMFRSLRQCIREIRIGLYRQDLNFINKQIEDYQNYSNHTEKIVIKNIFEQICNNPFDENWFKTLPQELYERGISSILFNSALKLADCEDAFMMLDEECCESEKYASDYLNLVLTEQFLLRGDTEEAQDSLERISEKYQHNTATYWGWLNFLRGENEQAIKYYTDALKAIKKATGKRSIYFNTMGGLFFILALLKDGSAERLKEAEEYATLMSRESDHWLTFVYVRLKMVLQVQRGDITQKELVVSAYIASVEEKNSLNTLFCSLCLYWMDAESAKKRLPDLLEPLYRRSLASGHHWLTMETAELLSRLKPSSNYKQQAAALREDSGIQTIVDVIQPQADWEMCLNALANLQKQPQKPGKPESELRLAWFITFHFVQCSLQPKEQKVNAKGEWSKGRPIALKRLSSGLAEFDYVTPQDMRVCGCIEAYSEGYYGKVDYMFNEKAILALIGHPTVFWEDTPNIRVEIVKGEPELLVKKEKQGRLTLEFSPKLPESQNILHIKETPTRIKVIEIKAEHRRIAEIIGKDNKLNVPAIAEKQVLAAINAVSGIVTVHSDIGGGLENAEEVPAQTLPHIHLLPANSGLKITLLSRPFTQGGPYFRPGAGGETVIAEIEGKRLQTKRNLSEEKQLAKAVIAACPTLTRIEEQDGEWTIEEAEDCLELLLELQTLGNSVVMAWPEGEKLRVSHNADLKDFNLSIQRQQDWFAATGELKLNDDLVLDMQQLLALLEKTPSRFIPLGDGQFLALTQAFRKRLDELRMFSEKHGKGMRFHPLATLGLEDFVDEVGKLKADKHWKEHIQKLKEVKDLQPELPSTFQAELRDYQMDGFCWLARLAHWGVGACLADQMGLGKTVQALAVILRNAHAGPTLIIAPTSVCMNWVSEAQKFAPTLNIMQFSGANRQKLLDGLQPLDMLVCSYGLLQQEEVSQMLAQVQWQTIVLDEAQSIKNMATKRSQAAMNLKANFKLLTTGTPIENHLGELWNLFRFINPGLLGSFESFNQRFANPIERYQDKQARNKLKKLIQPFLLRRTKNQVLEELPSRTEILLHVELSKEEKAFYEALRRQAISKLTESNADAGQKHLQVLAEIMKLRRACCNPSLVMPDTELSSSKLQLFGEVLGELLENRHKALVFSQFVDHLHIIRNYLVKEGIKYQYLDGSTPMAERKRSVDAFQSGDGDVFLISLKAGGTGLNLTAADYVIHTDPWWNPAVEDQASDRAHRIGQQRPVTIYRLVAKDTIEDKIVELHHHKRDLADSLLEGTDMSGKISTEALLQLIHEG
>NZ_CP011456.1|WP_081424373.1|3387873_3388149_-|hypothetical-protein
MRLARVAPSSQPENDGWREAGVGGGWGGWGGWGVGEVGGVGEVGGVGEVGGVGEVGGVGEVGGVGEVGGVGEVGGVGEGRTEVFSDHYPSK
>NZ_CP011456.1|WP_053539564.1|3388285_3389227_+|LysR-family-transcriptional-regulator
MNQATLHQLKVFEAAARHGSFTRAAEELFLTQPTISMQIKQLTKSVGLPLFEQVGKRLYLTEAGRELFATCRQIFETMDKFQMTIANLKGLKQGQLRLAVITTAKYIIPRLLGPFCQLYPGIDISLQVTNHELILDRMMGNLDDLYIMSQIPDHFDVNFQPFLENPLVVFAPANHPLAKEKNIPIERLGEEPFIMREPGSGTRSAVQGLFEEHGVKVKVKLELGSNEAIKQAIAGGLGISVLSRHTLLTDVAEFSILDVQHFPIKRTWYMVYPAGKQLSIIAHTYYQYLLDAAKKITEQGGLILDHNAVATHL
>NZ_CP011456.1|WP_053539565.1|3389321_3389750_+|hypothetical-protein
MQVQGIAISLVLGLSLPIVADVSVQSQAVANLAFPEGEFFDVQGQPRNWHLTLWQAKGQYYYKNLNLKTGKKLCLIGAKASGTQARPVFTWTNAKYKYRVSWQIVQPELVRLEVIDPSGKAILNQFLVREPGEFEDPNARKC
>NZ_CP011456.1|WP_053539566.1|3389970_3390813_+|hypothetical-protein
MEELRAVLELATEEELQDLTAILFSRKFNPLDYVHTPEPIAVQSQDHQAWLDTIEDRFRFLAADGITVLRGRTDQVTYRQALIQVCKYLKIHYYQDLTTIDLEAEIFLHLLGKVWKKLPKQEKQQLTINVQRQLVESKLKQPLPLSLQRDPLGLIFKGGSALAVTSVIQPFVLQQIARQFAIHFATYQVAKEAAITGTGLATKQFQNYVALQMSRRGMTMSAARYGAVRGAFALVGPVMWAWFFADLGWRAIATNYGRIIPTVFTLAQIRLTRTECWEIA
>NZ_CP011456.1|WP_053541295.1|3390794_3392090_+|O-antigen-ligase-family-protein
MLGNSLNKSFYHPNPRLQTPWHWLQFGLISFPLSPFLGGISIVVASLLTWRKQYHIISDRPIHKGFAILSILLLITTGFASGKLDAVLGLFNFIPFFFFFTGLTPLIQTPAQLRQIAWIMVFGSIPVLIIGFGQLFLGWNFQFQFLWIVFDWIVAPEKSLSGRMTANFMHPNTLAAYLVTIFILGLGLWLENYHKLKQNNPLIIFLTITVCTNFIALILTNSRNGWGITIFACLAYALYKGWRLIVAAVFTITSLCFFAAFAPAPIAQFFRLFVPYGIWARLNDDMFPNRPVGLMRKTQWDFAWNLTQQHPLTGSGLRSFGRLYKTQMQIDVNHPHNLFLMLSAETGLITTLLFCGLLIWILITASQTLWKSKSIAPENRLIFFSYLLTFSGWILFNTVDVTTFDIRLNTLSWVFLAALSGVMYQYQSRHK
>NZ_CP011456.1|WP_081424374.1|3392295_3392961_+|hypothetical-protein
MYRNRCFPQVFVFIFMITSLFACSVTENSTSANAKNPQRSQLSQNSLPQSISQAVLRDASRVSGLKISDLKITQVTSTIFSNPCIFQFGEVCTKEYNPIPGWTIIVQVKEQSWIYHVNKSGSQILLDPKISNNQLPKKITNGVLSDASKRSGLAISSLKVTQSTQKTFSNSCVFNFGEVCAQIFDPIKGWEVIVKVKNQFWTYHVDITGTRIVLDPQITKI
>NZ_CP011456.1|WP_053539567.1|3392964_3394308_-|protein-kinase
MPSTVTLTITTGKLSGKQYIFDSRSTCIIGRGEDCNLQIADNIDMTVSRYHCLLDINPPEMRIRDLGSLNGTIVNGKKIGQRKAGESPEEAKKIVFTEYDLVNNDQVAVGDIIFDIGVETELEKQKTPYIPVAEENNRPNFFEIIKNLLNLANQGNQNLQKISNYQIIKSLGEGGFGEVFLAEHIPTKKRVALKLMLPKVAAKELGVKMFLRETENTKYLQHPHVVQMLDYGYVENTFFFTMEYCAGGDVWNLMEKSGGQLPVSIAVDITLQVLDGLIYTHNVEVPCVKLADGRLGKGKGLVHRDLKPNNIFITKVNGKMVAKIGDYGLSKAFDLAGLSGHTFTGAKMGTPAFMCRQQLLDLKNSLPEVDVWASAACLYNMLTGYFPRDFVGDSWNCVLRNDAVLIRQRDSSIPEKLAEVIDLALIEKPKIHFQTAAEFKVALLECV
>NZ_CP011456.1|WP_053539568.1|3394545_3394806_+|hypothetical-protein
MVISAWGVDSVLSFGYPYVRGGKVCAHIYRVFIYQDNYFPNKSQKQRNKKIKFVLITKIPKRYLVSQDEDAITVDIELGKMGKISR

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Crispr_ID: NZ_CP011456_30

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011456_30

3467074-3467469

Orphan

I-D,II-B

Consensus_repeat	Method
GTTTCAATCCCTAATAGGGAGTAAATGAAATTGCAAT	PILER-CR
GTTTCAATCCCTAATAGGGAGTAAATGAAATTGCAAT	CRISPRCasFinder
GTTTCAATCCCTAATAGGGAGTAA	CRT

5 spacers

The CRISPR arrays of NZ_CP011456_30

>merge|NZ_CP011456|30|3467074-3467469|PILER-CR,CRISPRCasFinder,CRT
GTTTCAATCCCTAATAGGGAGTAAATGAAATTGCAATGATCCAGAACCAACAGAAGCAGTAGAAGGCCACCGTTTCAATCCCTAATAGGGAGTAAATGAAATTGCAATTAAGATTATAATCATCTAAATCACTATTATTTAAAAGTTTCAATCCCTAATAGGGAGTAAATGAAATTGCAATTTGGGCGATCGCTAGTGGGATGCGATCGCTCTGTTTCAATCCCTAATAGGGAGTAAGTGAAATTGCAATGAGAATATAAAATTCAGGTCGATTATAAGACATGGGGGTTTCAATCCCTAATAGGGAGTAAGTGAAATTGCAATTTTCTAGTGTTTCTGCACTTATTCCAAATTCAATCGTTTCAATCCCTAATAGGGAGTAAGTGAAATTGAATG

>NZ_CP011456|30|2|3467074-3467397|PILER-CR
GTTTCAATCCCTAATAGGGAGTAAATGAAATTGCAAT	GATCCAGAACCAACAGAAGCAGTAGAAGGCCACC
GTTTCAATCCCTAATAGGGAGTAAATGAAATTGCAAT	TAAGATTATAATCATCTAAATCACTATTATTTAAAA
GTTTCAATCCCTAATAGGGAGTAAATGAAATTGCAAT	TTGGGCGATCGCTAGTGGGATGCGATCGCTCT
GTTTCAATCCCTAATAGGGAGTAAGTGAAATTGCAAT	GAGAATATAAAATTCAGGTCGATTATAAGACATGGGG
GTTTCAATCCCTAATAGGGAGTAAGTGAAATTGCAAT

>NZ_CP011456|30|29|3467074-3467469|CRISPRCasFinder
GTTTCAATCCCTAATAGGGAGTAAATGAAATTGCAAT	GATCCAGAACCAACAGAAGCAGTAGAAGGCCACC
GTTTCAATCCCTAATAGGGAGTAAATGAAATTGCAAT	TAAGATTATAATCATCTAAATCACTATTATTTAAAA
GTTTCAATCCCTAATAGGGAGTAAATGAAATTGCAAT	TTGGGCGATCGCTAGTGGGATGCGATCGCTCT
GTTTCAATCCCTAATAGGGAGTAAGTGAAATTGCAAT	GAGAATATAAAATTCAGGTCGATTATAAGACATGGGG
GTTTCAATCCCTAATAGGGAGTAAGTGAAATTGCAAT	TTTCTAGTGTTTCTGCACTTATTCCAAATTCAATC
GTTTCAATCCCTAATAGGGAGTAAGTGAAATTGAATG

>NZ_CP011456|30|3|3467074-3467456|CRT
GTTTCAATCCCTAATAGGGAGTAA	ATGAAATTGCAATGATCCAGAACCAACAGAAGCAGTAGAAGGCCACC
GTTTCAATCCCTAATAGGGAGTAA	ATGAAATTGCAATTAAGATTATAATCATCTAAATCACTATTATTTAAAA
GTTTCAATCCCTAATAGGGAGTAA	ATGAAATTGCAATTTGGGCGATCGCTAGTGGGATGCGATCGCTCT
GTTTCAATCCCTAATAGGGAGTAA	GTGAAATTGCAATGAGAATATAAAATTCAGGTCGATTATAAGACATGGGG
GTTTCAATCCCTAATAGGGAGTAA	GTGAAATTGCAATTTTCTAGTGTTTCTGCACTTATTCCAAATTCAATC
GTTTCAATCCCTAATAGGGAGTAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011456.1\|WP_081424234.1\|3472072_3473047_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|99749
NZ_CP011456.1\|WP_053539606.1\|3466122_3466446_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053539612.1\|3474482_3475838_+\|UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D--alanine-ligase	unknown	unknown	gnl\|CDD\|223841
NZ_CP011456.1\|WP_081424233.1\|3450826_3451012_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|143636
NZ_CP011456.1\|WP_053539601.1\|3453027_3453609_-\|pyridoxamine-5'-phosphate-oxidase	unknown	unknown	gnl\|CDD\|274927
NZ_CP011456.1\|WP_053541299.1\|3461701_3462319_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053539609.1\|3469516_3471988_-\|N-6-DNA-methylase	unknown	unknown	gnl\|CDD\|377679
NZ_CP011456.1\|WP_053539600.1\|3451017_3452883_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|315987
NZ_CP011456.1\|WP_053539611.1\|3473447_3474260_+\|Rpn-family-recombination-promoting-nuclease/putative-transposase	unknown	unknown	gnl\|CDD\|371375
NZ_CP011456.1\|WP_053539602.1\|3453922_3454300_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053539610.1\|3473104_3473362_+\|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|224913
NZ_CP011456.1\|WP_053539604.1\|3457631_3458462_-\|DUF3598-family-protein	unknown	unknown	gnl\|CDD\|371960
NZ_CP011456.1\|WP_053539608.1\|3467747_3469274_-\|ferredoxin:protochlorophyllide-reductase-(ATP-dependent)-subunit-B	unknown	unknown	gnl\|CDD\|214355
NZ_CP011456.1\|WP_053539605.1\|3462885_3465753_+\|pyruvate-phosphate-dikinase-PEP/pyruvate-binding-protein	unknown	unknown	gnl\|CDD\|235751
NZ_CP011456.1\|WP_053539614.1\|3476487_3476817_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_027401649.1\|3475827_3476013_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053539603.1\|3454315_3454672_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053539613.1\|3476172_3476379_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_027401774.1\|3458788_3459007_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_027401651.1\|3477158_3477560_-\|fasciclin-domain-containing-protein	unknown	unknown	gnl\|CDD\|225214

Protein	Function_ID	Function_description	E-value
NZ_CP011456.1\|WP_081424234.1\|3472072_3473047_+\|hypothetical-protein	gnl\|CDD\|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	5.53232e-23
NZ_CP011456.1\|WP_053539600.1\|3451017_3452883_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|315987	pfam13424, TPR_12, Tetratricopeptide repeat.	1.814e-06
NZ_CP011456.1\|WP_081424233.1\|3450826_3451012_+\|hypothetical-protein	gnl\|CDD\|143636	cd07302, CHD, cyclase homology domain. Catalytic domains of the mononucleotidyl cyclases (MNC's), also called cyclase homology domains (CHDs), are part of the class III nucleotidyl cyclases. This class includes eukaryotic and prokaryotic adenylate cyclases (AC's) and guanylate cyclases (GC's). They seem to share a common catalytic mechanism in their requirement for two magnesium ions to bind the polyphosphate moiety of the nucleotide.	7.4662e-06
NZ_CP011456.1\|WP_053539601.1\|3453027_3453609_-\|pyridoxamine-5'-phosphate-oxidase	gnl\|CDD\|274927	TIGR04026, hypothetical_protein, PPOX class probable FMN-dependent enzyme, alr4036 family. Members of the PPOX family (see pfam01243) may contain either FMN or F420 as cofactor. This subfamily described here is widespread in Cyanobacteria and plants, and is named for alr4036 from Nostoc sp. PCC 7120. The family consists mostly of proteins from species that lack the capability to synthesize F420, so it is probable that all members bind FMN rather than F420. [Unknown function, Enzymes of unknown specificity].	4.40663e-88
NZ_CP011456.1\|WP_053539609.1\|3469516_3471988_-\|N-6-DNA-methylase	gnl\|CDD\|377679	pfam06616, BsuBI_PstI_RE, BsuBI/PstI restriction endonuclease C-terminus. This family represents the C-terminus of bacterial enzymes similar to type II restriction endonucleases BsuBI and PstI (EC:3.1.21.4). The enzymes of the BsuBI restriction/modification (R/M) system recognize the target sequence 5'CTGCAG and are functionally identical with those of the PstI R/M system.	9.21494e-84
NZ_CP011456.1\|WP_053539612.1\|3474482_3475838_+\|UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D--alanine-ligase	gnl\|CDD\|223841	COG0770, MurF, UDP-N-acetylmuramyl pentapeptide synthase [Cell envelope biogenesis, outer membrane].	1.46371e-164
NZ_CP011456.1\|WP_053539611.1\|3473447_3474260_+\|Rpn-family-recombination-promoting-nuclease/putative-transposase	gnl\|CDD\|371375	pfam11103, DUF2887, Protein of unknown function (DUF2887). This bacterial family of proteins has no known function. These proteins may be distantly related to the PD(D/E)XK superfamily.	4.8813e-110
NZ_CP011456.1\|WP_053539610.1\|3473104_3473362_+\|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein	gnl\|CDD\|224913	COG2002, AbrB, Regulators of stationary/sporulation gene expression [Transcription].	4.59405e-09
NZ_CP011456.1\|WP_053539604.1\|3457631_3458462_-\|DUF3598-family-protein	gnl\|CDD\|371960	pfam12204, DUF3598, Domain of unknown function (DUF3598). This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 230 and 398 amino acids in length. These proteins are formed entirely from B sheets which form a barrel structure similar to those seen in the lipocalin superfamily.	1.89995e-129
NZ_CP011456.1\|WP_053539608.1\|3467747_3469274_-\|ferredoxin:protochlorophyllide-reductase-(ATP-dependent)-subunit-B	gnl\|CDD\|214355	CHL00076, chlB, photochlorophyllide reductase subunit B.	0
NZ_CP011456.1\|WP_053539605.1\|3462885_3465753_+\|pyruvate-phosphate-dikinase-PEP/pyruvate-binding-protein	gnl\|CDD\|235751	PRK06241, PRK06241, phosphoenolpyruvate synthase; Validated.	7.47248e-88
NZ_CP011456.1\|WP_027401651.1\|3477158_3477560_-\|fasciclin-domain-containing-protein	gnl\|CDD\|225214	COG2335, COG2335, Secreted and surface protein containing fasciclin-like repeats [Cell envelope biogenesis, outer membrane].	1.9477e-55

>NZ_CP011456.1|WP_053539606.1|3466122_3466446_+|hypothetical-protein
MNTQLVESITQIILSLSPEERQLLESKINNVKLSSPLANSTQQDISDLEQKLKNFETKYQMSSGDFYQEFQAGKLGDEIDFFEWSVFYEMWTNAQNTIQINTNLIAS
>NZ_CP011456.1|WP_053539605.1|3462885_3465753_+|pyruvate-phosphate-dikinase-PEP/pyruvate-binding-protein
MINLFGIVIILIVCPLLGAIPLISWITYALSGKQLAKVGTGNISVAAAFYHGGKLAGSICVVSEALKGVGVVTIAQYCFPSQPVWELIALIALVIGRYVATKGAGITNVSWGLLAHDPMVAAFVSLLAAMGFLITRSKETIKLGVLVIFPLFVGIIHSQDILRIIAAATLSGLIYWIYSQIPDDMNLPVEEAALESQPMMEYLNNQERIITLDDDLDGEVVGAKAATLSQIKRWGYAVPKGWVLPAGEDPTVLIDFLQPSPLSPLVVRSSAIGEDSQQASAAGQYETILNVISKVELRQAIAQVKASYDHPSAVEYRHRSSSEDRAMGVLIQQQVQSVFSGVAFSRDPISQQGEAVVIEAVSGSPTQIVSGKVTPEQYRVVVADNEKLSCLQFEGHGKVPEALIKQVAYLARRLEKRYLGIPQDIEWSYDGQNLWVLQTRPITTLLPLWTRKIAAEVIPGVIHPLTWSINSPLTCGVWGEIFSIVLGDRSNRLDFTTTATLHYSRAYFNASLLGEIFLKMGLPPESLEFLTRGASMSKPALDSTLANLPGLTKLLKREIDLDKDFKLDYRQVFIPGLTQLSNVVIEELSLDQLLGRIDLILDLLHRGTYYSILAPLSAAIRQAVLGAKVEEIDNSVTPEVASLRAMRLLAADARQILIAGNYEFKPEQVFAQLAETAAGSRILAEFNELIEDYGYLSEVGTDISVPTWRENPQIVRQLFIQLLQAPEAPNLDDSRSEQTNLVQRRVDLKGRVTEVYSRLLAELRWTFLALEQMWLQSGVLTQQGDIFFLKLEEIRRLGINPDVAFRNHIWELIANRRSQFIQDSQIPQIPPVVYGYNPPHPIKPVIDSSDNILLGIPASQGQIQGRVKVLRTLQEAHNIDKNTILVVPYTDSGWAPILVQAGGLIAEAGGKLSHGAIIAREYGIPAVMDVRGATYLLQDGQQVQIDGYKGTVEIL
>NZ_CP011456.1|WP_053541299.1|3461701_3462319_+|hypothetical-protein
MKANLISNSASDFINSLSCAATAYRAGNQLPSAEIMVNALLEAEKTAKLQKLNYPFESLNGKWRLCFATGTKKVRNRGGIILGKGWYVPRFTKIHICLNPLETKTLGTGEIANQVQLGGILFKLTGPIKYLGKKNLLAFDFIKMQISLFDWMFVNQNISASKGEIKDFNEQAIAKLAFFAFFLVTEDMIAARGRGGGLALWIREN
>NZ_CP011456.1|WP_027401774.1|3458788_3459007_+|hypothetical-protein
MFITELSPLFRELAQHPVSFLGGFVSGVLRLNLTEDPVKSWLNKKGCGNSSSNLSTEVQNGKANGPQQITID
>NZ_CP011456.1|WP_053539604.1|3457631_3458462_-|DUF3598-family-protein
MTSNWENFLKNLGEWRGSFTKISPNGEILDSTASILNLEADDNNQAVIFRLRRFDSYDYDSPPIQDYQQEYRSLGRQNIFFATGAFSKGTLQLAPFSEFGAEYGFIDDDRRSRLVQLYDQQGNFINLTLIREFRSFTDAYERPQLTVEQLIGNWQGKAHTVYSDLRPSATYTTYLEIKEIGDGYLEQKLSFQSQIITAKARIEGNKIISEMEGIPRQILLLPDGTSSNVPLQLQLRKPFFVEAGWLVRENERQRLIRSYSDKGEWISSTHVIESKI
>NZ_CP011456.1|WP_053539603.1|3454315_3454672_+|hypothetical-protein
MAEKIKLMADYECYPLWWAGSDKVGDIDPETMPLSGETVSRLEKWADIYDAKLNWEDPNSSGFPTLEAKAAFEQEGISLWKQLQKELAPNYEVIYFSEQLRQVVNNINELASLLAISA
>NZ_CP011456.1|WP_053539602.1|3453922_3454300_+|hypothetical-protein
MNSAEKLVLISELVKLGIKHTSEKIVKIAKQADGKIVFLEEGNSDAGLQHILEKHSLEFADQGIKQNQIPDTIIAALTEGKMIRYQGRKKTRMIYEVNFNGKTHYIALTVSDNGYIVGANPRTYP
>NZ_CP011456.1|WP_053539601.1|3453027_3453609_-|pyridoxamine-5'-phosphate-oxidase
MSLAPWRSLITRALHQNRSLVYARYVQLATVRENGFPANRTVVFRGFLDNTNQLKFITDIRSAKAEQISKQSAGEICWYFPNTREQFRITGELILISADSHPHLQPARIKMWQELSDAARLQFAWPIPGDMRVQTPEAFTPPAPDNIQPLENFCLLLLEPVKVDHLELRGEPQNRWIYHRHEQQEWLTEAINP
>NZ_CP011456.1|WP_053539600.1|3451017_3452883_+|tetratricopeptide-repeat-protein
MSDPLPLREHYLALINDIIETTLKGKISSVEQVYQMLLKGITSGTGEVFELVLSDRLNTIQSQVDSETDELKKAKATRSLRAAKTIQTQWQRWQEQNKATEAISLSMREITTATADERLTALLRATDPNQKYPLNLSQLQQLAKSLQQFAGANQDFQQIADGINRGIASWQRIQANLLNWMYERKNSLGFGGVPGENSPWASWAKVVNSEVPQAFFQILAKEQSALEFAQQQQQISLSNWVELTIVLQFLQRGLINWFDSYGALRYQQAYDIQAGPKLSISTFLTFAVIWSQLASGFQNQAAIYSNGASQIMLQILRTFAQRPYFPLYGGIFASFSGSYLRDALDYLDAPLRSAEGTQEKARILTLLGYSQRGLGRYDRSLDFHQQAVEIARTAGDKTCEIANLNHLSRTYVQQENYGEAINYSQRALIFSRQTGDKTGEANALVNLGYSEVMQAKQTEISESEVYESAINYLEQGLKLAEKLNDLQSQALCFSSLGIAYLVTAQYPSAIKYLENAFKIAQISGDLYLQGRNLAYLAEANYLMANYEKAVYSGSLGMYLLEQIASDEWRKPAALLTIIRGQITTDKFQLLLQQNRPNMIAIIGVDGYDYIPSLLVKYQEDI
>NZ_CP011456.1|WP_081424233.1|3450826_3451012_+|hypothetical-protein
MHTARYMAVASLSNYRSDHALAIANMALDMQKSVLKFNQKNPIPNLPTCNSYNENCCDVLY
>NZ_CP011456.1|WP_053539608.1|3467747_3469274_-|ferredoxin:protochlorophyllide-reductase-(ATP-dependent)-subunit-B
MKLAYWMYSGPAHIGTLRIASSFKNVHAIMHAPLGDDYFNVMRSMLSRERNFTPVTTSVVDRNVLARGSQEKVVDNITRKDAEEHPDLIVLTPTCTSSILQEDLHNFVERAQLEAKGDVMLADVNHYRYNELQAADRTLQQIVQYYIEKARKRGELPTEKTVKPSVNIIGVSTLGFHNNHDVTELKRLMTDLGIQVNTVIPEGASVHELKTMPQAWFNLIPYRELGLTTAKYLEEQFGTPYVDITPMGVVETAKCIRKIQQVINAQGAEVNYEDFINEQTLHVSQAAWFSRSIDCQNLTGKKAVVFGDNTHAAALTKILSREMGIHVVWAGTYCKYDADWFREQVSEYCDEVLITDDHGEIGDAIARVEPSAIFGTQMERHVGKRLDIPCGVIAAPIHVQNFPIGYKPFMGYEGTNQITDLIYNSFTLGMEDHLLEIFGGHDTKEVITKGISAESGLNWTKDGQAELNKIPGFVRGKVKRNTEKFARERGFKDISAEVLYAAKESVGA
>NZ_CP011456.1|WP_053539609.1|3469516_3471988_-|N-6-DNA-methylase
MTTFLTDSTDINRFNLSAKLNPKQRSELGQFMTPATVARLMAGQFNNLSGHINLLDPGAGFGSLTAAFVERLLTNSNQVESCFITAYEVEASFIPSLQECLNHCCQALKNRGIKADYCLQNESFIGSITENNLPLFNTYTQNFTHAIMNPPYKKINSKSIEKKILSKLGIETVNLYSAFVWLSILQLSINGEIVAITPRSFCNGSYFRPFRQAFLEKMVLQNIHIFESRSLAFAEDNVLQENIIFHATKTEIKPKFIEISINSEQELDSFSEMRLVPYNQVIEKNDPEMFIHVLTNSLEDALKVQMDKFPSTLEELSLEISTGPVVDFRLKSSLRNSLDDQTVPLIYPESIKPGKVLFPPTKPKKSIAIEKNQETQKWLIPSGCYIVVKRFSAKEEKRRIVAAVSYPIDSSALGIENHLNYYHAKGKGMNLDLAKGLTAFLNSTLFDQYFRLFSGNTQVNATDLRKIKYPCKNDLIKLGTQIHESAFDQDQIDQLVHQNLSIMSEAINTIHASKRIQEALTILEEISAPKEQQNERSALCLLALADIRPETSWDQATTPKRRITEMMDWFRDFYGKQYAPNTRETVRRQTMHQFVQMGLVVENPDQPDRPINSPKWCYQLQQQALSLIQSYGSDQWEESRRNYTISVKNLLQDRTRNISTIPVSLPNGQAIYLSSGGQNNLIKDILENFCPRFTPGGLVLYVGDAGDKFIINETQKFREIGIDLDPHGKMPDVVIYYQQQDWLILIEAVTSHGPVNLKRHNELRKLFQSSNKGLVFMTAFPSRKDMTRYLAEISWETEVWVADQADHLIHFNGERFLGPYENR
>NZ_CP011456.1|WP_081424234.1|3472072_3473047_+|hypothetical-protein
MVKIPFLASTIPPLTNGDKLTRYEFERRYNTTSKPKKAELIEGIVYIMPAALRFRSHGQPHGRILTWIGNYEVLTPGVALGVEPTVRLDLDNEPQPDAILIIIPEAGGQTRISEDDYIEGAPELVVEIAASSAAIDLHGKKQAYRRNGVKEYIILDAIPRCYPLIHPDLMFTRVFGDSIESVVNEERRLFYVALTRAVETLFIITESTNSSPFLDELNRRTEISILNWSDYQTFIGVGTVQYITVKVGNQIGKGSNGTYTISHLLKAEGYEWNKTKKVWYRTYPAEGFSIPEYFNNVNWISQAVGIEVRFYDDAENELAFYHID
>NZ_CP011456.1|WP_053539610.1|3473104_3473362_+|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein
MEITKLSTQGQITIPQVLRDQYHWQDGQELIIINLGDGILLKPKKTFPETTLDDAAGCLNYQGKAKTIEEMEQAVAQGIEELGHQ
>NZ_CP011456.1|WP_053539611.1|3473447_3474260_+|Rpn-family-recombination-promoting-nuclease/putative-transposase
MKTDSIFYRLFQEIPSIFFELIGNSPQLAELYQFSSVEVKQTALRIDGVFLPNQNTDNPIYFLEVQFQSDKDLYHRLFSEIFLYIRQNNPKNHWSAVVIYPTRSIDTQDIQHYQEFFTSQRVRVIYLDELAETTSLPIGIATIKLIIANQDNSITQARELITRTKQEINSQLQQQQLLQIIETILIYKFPRMNREEIEAMFGLSELKQTRFYQEAKEEGKEEGERKAKLDAVPGLIALGLTREQIAQVLNLSLEEISQIIQQQNINTKDK
>NZ_CP011456.1|WP_053539612.1|3474482_3475838_+|UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D--alanine-ligase
MSVSITISQLLEVLIAEPVNVSVSTLTQLAIGIQTDTRILQPGEVFLALRGEKFDGHDFVPTAIAQGAIVAIVDRHYENPGFPVLRVKDTLKAYQQIAKWWRESFAIPVIGITGSVGKTTTKELISAVLATKGKVHKTYGNFNNEIGVPKTLLEMGRENNFAVIEMAMRGRGQIAELTEIVKPTIGVITNVGTAHIELLGSEEAIAEAKCELLATMPNDSIAILNYDNPLLMETAAKFWQGKVISYGFSGGDIQGELTDNETVEVAGMRLPLPLPGRHNATNFLAALAVAKVLEIDWQLLQSGIMVNMPTGRSQRFTLPNDVVILDETYNAAPEAMLAALQLLADTPGKRKIAVLGAMKELGERSPELHRKVGEMVKNLHLDGLLVLVDGQDAEIIANSADNISCECFTNHADLVTRLKTFMQTGDRLLFKAAHSVGLDRVVNQLRAEFTN
>NZ_CP011456.1|WP_027401649.1|3475827_3476013_-|hypothetical-protein
MAISNYFFLTKRLFILIFCYMVEMFHATSLEKSYFFGVLYLSEKPDLIKFVLSEIPGIFNW
>NZ_CP011456.1|WP_053539613.1|3476172_3476379_+|hypothetical-protein
MANIQISALLPVGYDLFNDAASFMNELATDEVQNVIGGGYSGYHSWGGNSWGGNSWGGYNHHHCGSCC
>NZ_CP011456.1|WP_053539614.1|3476487_3476817_-|hypothetical-protein
MLDFHTLTEFSRNHCIGICGFLVPANVLTTLLTIILAFLNRPMSQVWASVTLACTFAAIMMLHVYTWFMIGVVMLPTYVLLSLAVTCLLTNLLVIIWRRNPLQLFSLGK
>NZ_CP011456.1|WP_027401651.1|3477158_3477560_-|fasciclin-domain-containing-protein
MADIVDIAVSNDAFKTLVAAVSAAGLVETLKSPGPFTVFAPTDDAFAKLPPGTITTLLQNIPQLARILTYHVVPGKLTKDDLAKLGTVNSVEGSPIKINCEDGFEVKNATVLAADIIADNGVIHVIDTVILMG

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Crispr_ID: NZ_CP011456_31

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011456_31

3594235-3595798

TypeI-D

I-D,II-B

Consensus_repeat	Method
GTTTCAATCCCTAATAGGGAGTAAATGAAATTGCAAT	PILER-CR
ATTGCAATTTCATTTACTCCCTATTAGGGATTGAAAC	CRISPRCasFinder
ATTGCAATTTCATTTACTCCCTATTAGGGATTGAAAC	CRT

21 spacers

cas2,cas1,cas4,cas6,cas3,csc1gr5,csc2gr7,cas10d

The CRISPR arrays of NZ_CP011456_31

>merge|NZ_CP011456|31|3594235-3595798|PILER-CR,CRISPRCasFinder,CRT
ATTGCAATTTCATTTACTCCCTATTAGGGATTGAAACTGGAGCAGCTACGCTAGTTTTAAAGATGATATTCATTGCAATTTCATTTACTCCCTATTAGGGATTGAAACGTCATTACTTCGCCCAGCACAGAAACGGGTATATCTAATTGCAATTTCATTTACTCCCTATTAGGGATTGAAACATTTATTGTGATTACAGCATTTGAAAGTTGAGTATTATTGCAATTTCATTTACTCCCTATTAGGGATTGAAACCTTAAAATACCACCTGTATAATATTTATTGCCCTTACATTGCAATTTCATTTACTCCCTATTAGGGATTGAAACATAAAAAAAGATGGTATTTATTACCGGAAAAAATTGCAATTTCATTTACTCCCTATTAGGGATTGAAACATATTAGGATTAGTACCACCGCTTATTTTATACAATTGCAATTTCATTTACTCCCTATTAGGGATTGAAACCTTTTTGAAGATTAAGTTTAGGATGCAAAGTTTTATTGCAATTTCATTTACTCCCTATTAGGGATTGAAACAACTTTGCTCAAAAGTGGGAACGACGAACCAATGATCATATTGCAATTTCATTTACTCCCTATTAGGGATTGAAACATACACACAATACACCTATGACGACTACAACTGAAATTGCAATTTCATTTACTCCCTATTAGGGATTGAAACACGTAAGGGCTTTTTTTATATATATCAACAATTGTATTGCAATTTCATTTACTCCCTATTAGGGATTGAAACGAACCATTGAACCATTGGGGTGGCGATATTAATGATTGCAATTTCATTTACTCCCTATTAGGGATTGAAACGTCAGGAGCGGCATTTGTTAGTTTTGCCCTGGCGGGGTATTGCAATTTCATTTACTCCCTATTAGGGATTGAAACTTCCTCAAATTTGGCCGCGGTGAGTGCTGTGGAATTATTGCAATTTCATTTACTCCCTATTAGGGATTGAAACTTCATCGGGAATAATAATATTGTGGGTGTACAAGATTGCAATTTCATTTACTCCCTATTAGGGATTGAAACTGGTAAACGCACTTTGTATATGGGTGAACCGACACCGGATTGCAATTTCATTTACTCCCTATTAGGGATTGAAACAAAAAGGGCTAGGGATGAGATCGTCAAGTCCTATGAGATTGCAATTTCACTTACTCCCTATTAGGGATTGAAACCTAATCCACCTTCGCGCCAGGAGAAATAAAGGGTAAATTGCAATTTCACTTACTCCCTATTAGGGATTGAAACAATGACGAGACACGACCTCGCACTCAACAGGAACAGGATTGCAATTTCACTTACTCCCTATTAGGGATTGAAACCATTGTGGAGAAATATTGAGTCATGGGGATGCTCGAATTGCAATTTCACTTACTCCCTATTAGGGATTGAAACACGGGAGCAATTGACTCTACGCCTGATATCTCAAATTGCAATTTCACTTACTCCCTATTAGGGATTGAAACCTAATGGTGTTCCCACACTTGCAGGGACGTGGACTGGATTGCAATTTCATTTACTCCCTATTAGGGATTGAAAC

>NZ_CP011456|31|3|3594235-3595798|PILER-CR
ATTGCAATTTCATTTACTCCCTATTAGGGATTGAAAC	TGGAGCAGCTACGCTAGTTTTAAAGATGATATTC
ATTGCAATTTCATTTACTCCCTATTAGGGATTGAAAC	GTCATTACTTCGCCCAGCACAGAAACGGGTATATCTA
ATTGCAATTTCATTTACTCCCTATTAGGGATTGAAAC	ATTTATTGTGATTACAGCATTTGAAAGTTGAGTATT
ATTGCAATTTCATTTACTCCCTATTAGGGATTGAAAC	CTTAAAATACCACCTGTATAATATTTATTGCCCTTAC
ATTGCAATTTCATTTACTCCCTATTAGGGATTGAAAC	ATAAAAAAAGATGGTATTTATTACCGGAAAAA
ATTGCAATTTCATTTACTCCCTATTAGGGATTGAAAC	ATATTAGGATTAGTACCACCGCTTATTTTATACA
ATTGCAATTTCATTTACTCCCTATTAGGGATTGAAAC	CTTTTTGAAGATTAAGTTTAGGATGCAAAGTTTT
ATTGCAATTTCATTTACTCCCTATTAGGGATTGAAAC	AACTTTGCTCAAAAGTGGGAACGACGAACCAATGATCAT
ATTGCAATTTCATTTACTCCCTATTAGGGATTGAAAC	ATACACACAATACACCTATGACGACTACAACTGAA
ATTGCAATTTCATTTACTCCCTATTAGGGATTGAAAC	ACGTAAGGGCTTTTTTTATATATATCAACAATTGT
ATTGCAATTTCATTTACTCCCTATTAGGGATTGAAAC	GAACCATTGAACCATTGGGGTGGCGATATTAATG
ATTGCAATTTCATTTACTCCCTATTAGGGATTGAAAC	GTCAGGAGCGGCATTTGTTAGTTTTGCCCTGGCGGGGT
ATTGCAATTTCATTTACTCCCTATTAGGGATTGAAAC	TTCCTCAAATTTGGCCGCGGTGAGTGCTGTGGAATT
ATTGCAATTTCATTTACTCCCTATTAGGGATTGAAAC	TTCATCGGGAATAATAATATTGTGGGTGTACAAG
ATTGCAATTTCATTTACTCCCTATTAGGGATTGAAAC	TGGTAAACGCACTTTGTATATGGGTGAACCGACACCGG
ATTGCAATTTCATTTACTCCCTATTAGGGATTGAAAC	AAAAAGGGCTAGGGATGAGATCGTCAAGTCCTATGAG
ATTGCAATTTCACTTACTCCCTATTAGGGATTGAAAC	CTAATCCACCTTCGCGCCAGGAGAAATAAAGGGTAA
ATTGCAATTTCACTTACTCCCTATTAGGGATTGAAAC	AATGACGAGACACGACCTCGCACTCAACAGGAACAGG
ATTGCAATTTCACTTACTCCCTATTAGGGATTGAAAC	CATTGTGGAGAAATATTGAGTCATGGGGATGCTCGA
ATTGCAATTTCACTTACTCCCTATTAGGGATTGAAAC	ACGGGAGCAATTGACTCTACGCCTGATATCTCAA
ATTGCAATTTCACTTACTCCCTATTAGGGATTGAAAC	CTAATGGTGTTCCCACACTTGCAGGGACGTGGACTGG
ATTGCAATTTCATTTACTCCCTATTAGGGATTGAAAC

>NZ_CP011456|31|30|3594235-3595798|CRISPRCasFinder
ATTGCAATTTCATTTACTCCCTATTAGGGATTGAAAC	TGGAGCAGCTACGCTAGTTTTAAAGATGATATTC
ATTGCAATTTCATTTACTCCCTATTAGGGATTGAAAC	GTCATTACTTCGCCCAGCACAGAAACGGGTATATCTA
ATTGCAATTTCATTTACTCCCTATTAGGGATTGAAAC	ATTTATTGTGATTACAGCATTTGAAAGTTGAGTATT
ATTGCAATTTCATTTACTCCCTATTAGGGATTGAAAC	CTTAAAATACCACCTGTATAATATTTATTGCCCTTAC
ATTGCAATTTCATTTACTCCCTATTAGGGATTGAAAC	ATAAAAAAAGATGGTATTTATTACCGGAAAAA
ATTGCAATTTCATTTACTCCCTATTAGGGATTGAAAC	ATATTAGGATTAGTACCACCGCTTATTTTATACA
ATTGCAATTTCATTTACTCCCTATTAGGGATTGAAAC	CTTTTTGAAGATTAAGTTTAGGATGCAAAGTTTT
ATTGCAATTTCATTTACTCCCTATTAGGGATTGAAAC	AACTTTGCTCAAAAGTGGGAACGACGAACCAATGATCAT
ATTGCAATTTCATTTACTCCCTATTAGGGATTGAAAC	ATACACACAATACACCTATGACGACTACAACTGAA
ATTGCAATTTCATTTACTCCCTATTAGGGATTGAAAC	ACGTAAGGGCTTTTTTTATATATATCAACAATTGT
ATTGCAATTTCATTTACTCCCTATTAGGGATTGAAAC	GAACCATTGAACCATTGGGGTGGCGATATTAATG
ATTGCAATTTCATTTACTCCCTATTAGGGATTGAAAC	GTCAGGAGCGGCATTTGTTAGTTTTGCCCTGGCGGGGT
ATTGCAATTTCATTTACTCCCTATTAGGGATTGAAAC	TTCCTCAAATTTGGCCGCGGTGAGTGCTGTGGAATT
ATTGCAATTTCATTTACTCCCTATTAGGGATTGAAAC	TTCATCGGGAATAATAATATTGTGGGTGTACAAG
ATTGCAATTTCATTTACTCCCTATTAGGGATTGAAAC	TGGTAAACGCACTTTGTATATGGGTGAACCGACACCGG
ATTGCAATTTCATTTACTCCCTATTAGGGATTGAAAC	AAAAAGGGCTAGGGATGAGATCGTCAAGTCCTATGAG
ATTGCAATTTCACTTACTCCCTATTAGGGATTGAAAC	CTAATCCACCTTCGCGCCAGGAGAAATAAAGGGTAA
ATTGCAATTTCACTTACTCCCTATTAGGGATTGAAAC	AATGACGAGACACGACCTCGCACTCAACAGGAACAGG
ATTGCAATTTCACTTACTCCCTATTAGGGATTGAAAC	CATTGTGGAGAAATATTGAGTCATGGGGATGCTCGA
ATTGCAATTTCACTTACTCCCTATTAGGGATTGAAAC	ACGGGAGCAATTGACTCTACGCCTGATATCTCAA
ATTGCAATTTCACTTACTCCCTATTAGGGATTGAAAC	CTAATGGTGTTCCCACACTTGCAGGGACGTGGACTGG
ATTGCAATTTCATTTACTCCCTATTAGGGATTGAAAC

>NZ_CP011456|31|4|3594235-3595798|CRT
ATTGCAATTTCATTTACTCCCTATTAGGGATTGAAAC	TGGAGCAGCTACGCTAGTTTTAAAGATGATATTC
ATTGCAATTTCATTTACTCCCTATTAGGGATTGAAAC	GTCATTACTTCGCCCAGCACAGAAACGGGTATATCTA
ATTGCAATTTCATTTACTCCCTATTAGGGATTGAAAC	ATTTATTGTGATTACAGCATTTGAAAGTTGAGTATT
ATTGCAATTTCATTTACTCCCTATTAGGGATTGAAAC	CTTAAAATACCACCTGTATAATATTTATTGCCCTTAC
ATTGCAATTTCATTTACTCCCTATTAGGGATTGAAAC	ATAAAAAAAGATGGTATTTATTACCGGAAAAA
ATTGCAATTTCATTTACTCCCTATTAGGGATTGAAAC	ATATTAGGATTAGTACCACCGCTTATTTTATACA
ATTGCAATTTCATTTACTCCCTATTAGGGATTGAAAC	CTTTTTGAAGATTAAGTTTAGGATGCAAAGTTTT
ATTGCAATTTCATTTACTCCCTATTAGGGATTGAAAC	AACTTTGCTCAAAAGTGGGAACGACGAACCAATGATCAT
ATTGCAATTTCATTTACTCCCTATTAGGGATTGAAAC	ATACACACAATACACCTATGACGACTACAACTGAA
ATTGCAATTTCATTTACTCCCTATTAGGGATTGAAAC	ACGTAAGGGCTTTTTTTATATATATCAACAATTGT
ATTGCAATTTCATTTACTCCCTATTAGGGATTGAAAC	GAACCATTGAACCATTGGGGTGGCGATATTAATG
ATTGCAATTTCATTTACTCCCTATTAGGGATTGAAAC	GTCAGGAGCGGCATTTGTTAGTTTTGCCCTGGCGGGGT
ATTGCAATTTCATTTACTCCCTATTAGGGATTGAAAC	TTCCTCAAATTTGGCCGCGGTGAGTGCTGTGGAATT
ATTGCAATTTCATTTACTCCCTATTAGGGATTGAAAC	TTCATCGGGAATAATAATATTGTGGGTGTACAAG
ATTGCAATTTCATTTACTCCCTATTAGGGATTGAAAC	TGGTAAACGCACTTTGTATATGGGTGAACCGACACCGG
ATTGCAATTTCATTTACTCCCTATTAGGGATTGAAAC	AAAAAGGGCTAGGGATGAGATCGTCAAGTCCTATGAG
ATTGCAATTTCACTTACTCCCTATTAGGGATTGAAAC	CTAATCCACCTTCGCGCCAGGAGAAATAAAGGGTAA
ATTGCAATTTCACTTACTCCCTATTAGGGATTGAAAC	AATGACGAGACACGACCTCGCACTCAACAGGAACAGG
ATTGCAATTTCACTTACTCCCTATTAGGGATTGAAAC	CATTGTGGAGAAATATTGAGTCATGGGGATGCTCGA
ATTGCAATTTCACTTACTCCCTATTAGGGATTGAAAC	ACGGGAGCAATTGACTCTACGCCTGATATCTCAA
ATTGCAATTTCACTTACTCCCTATTAGGGATTGAAAC	CTAATGGTGTTCCCACACTTGCAGGGACGTGGACTGG
ATTGCAATTTCATTTACTCCCTATTAGGGATTGAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011456.1\|WP_053539704.1\|3607946_3608291_+\|calcium-binding-protein	unknown	unknown	gnl\|CDD\|366048
NZ_CP011456.1\|WP_053539692.1\|3583212_3583656_+\|DUF86-domain-containing-protein	unknown	unknown	gnl\|CDD\|366864
NZ_CP011456.1\|WP_053539708.1\|3610711_3611902_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053539703.1\|3606765_3607101_-\|thioredoxin	unknown	unknown	gnl\|CDD\|365862
NZ_CP011456.1\|WP_081424240.1\|3598569_3598749_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_081424239.1\|3591951_3592605_+\|CRISPR-associated-protein-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	gnl\|CDD\|187768
NZ_CP011456.1\|WP_053539702.1\|3605505_3606690_-\|LL-diaminopimelate-aminotransferase	unknown	unknown	gnl\|CDD\|180947
NZ_CP011456.1\|WP_053539695.1\|3587435_3588194_+\|type-I-D-CRISPR-associated-protein-Cas5/Csc1	csc1gr5	cd09711_csc1gr5_CAS-I-D	gnl\|CDD\|274458
NZ_CP011456.1\|WP_053539697.1\|3590489_3591308_+\|CRISPR-associated-endoribonuclease-Cas6	cas6	COG5551_cas6_CAS-III	gnl\|CDD\|227838
NZ_CP011456.1\|WP_053539705.1\|3608335_3608530_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053539701.1\|3604511_3605378_+\|carboxylating-nicotinate-nucleotide-diphosphorylase	unknown	unknown	gnl\|CDD\|236017
NZ_CP011456.1\|WP_081424238.1\|3591583_3591907_+\|four-helix-bundle-protein	unknown	unknown	gnl\|CDD\|319869
NZ_CP011456.1\|WP_053539698.1\|3592709_3593714_+\|type-I-D-CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|274976
NZ_CP011456.1\|WP_053539694.1\|3586406_3587432_+\|type-I-D-CRISPR-associated-protein-Cas7/Csc2	csc2gr7	cd09709_csc2gr7_CAS-I-D	gnl\|CDD\|375747
NZ_CP011456.1\|WP_053539699.1\|3593734_3594007_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP011456.1\|WP_053539706.1\|3608878_3609670_-\|PspA/IM30-family-protein	unknown	unknown	gnl\|CDD\|224755
NZ_CP011456.1\|WP_053539696.1\|3588186_3590466_+\|type-I-D-CRISPR-associated-helicase-Cas3'	cas3	cd09710_cas3_CAS-I-D	gnl\|CDD\|187841
NZ_CP011456.1\|WP_053539707.1\|3609835_3610546_-\|PspA/IM30-family-protein	unknown	unknown	gnl\|CDD\|224755
NZ_CP011456.1\|WP_053539700.1\|3596810_3598046_+\|glycosyltransferase-family-4-protein	unknown	unknown	gnl\|CDD\|340831
NZ_CP011456.1\|WP_053539693.1\|3583648_3586378_+\|CRISPR-associated-protein-Csc3	cas10d	mkCas0201_cas10d_CAS-I-D	gnl\|CDD\|187843

Protein	Function_ID	Function_description	E-value
NZ_CP011456.1\|WP_053539704.1\|3607946_3608291_+\|calcium-binding-protein	gnl\|CDD\|366048	pfam00353, HemolysinCabind, Haemolysin-type calcium-binding repeat (2 copies).	8.23315e-09
NZ_CP011456.1\|WP_053539692.1\|3583212_3583656_+\|DUF86-domain-containing-protein	gnl\|CDD\|366864	pfam01934, DUF86, Protein of unknown function DUF86. The function of members of this family is unknown.	1.38557e-19
NZ_CP011456.1\|WP_053539703.1\|3606765_3607101_-\|thioredoxin	gnl\|CDD\|365862	pfam00085, Thioredoxin, Thioredoxin. Thioredoxins are small enzymes that participate in redox reactions, via the reversible oxidation of an active centre disulfide bond. Some members with only the active site are not separated from the noise.	4.85749e-38
NZ_CP011456.1\|WP_081424239.1\|3591951_3592605_+\|CRISPR-associated-protein-Cas4	gnl\|CDD\|187768	cd09637, Cas4_I-A_I-B_I-C_I-D_II-B, CRISPR/Cas system-associated protein Cas4. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas4 is RecB-like nuclease with three-cysteine C-terminal cluster.	1.59373e-56
NZ_CP011456.1\|WP_053539702.1\|3605505_3606690_-\|LL-diaminopimelate-aminotransferase	gnl\|CDD\|180947	PRK07366, PRK07366, LL-diaminopimelate aminotransferase.	0
NZ_CP011456.1\|WP_053539695.1\|3587435_3588194_+\|type-I-D-CRISPR-associated-protein-Cas5/Csc1	gnl\|CDD\|274458	TIGR03159, cas_Csc1, CRISPR type I-D/CYANO-associated protein Csc1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This protein family is a CRISPR-associated (Cas) family strictly associated with the Cyano subtype of CRISPR/Cas locus, found in several species of Cyanobacteria and several archaeal species. This family is designated Csc1 for CRISPR/Cas Subtype Cyano protein 1, as it is often the first gene upstream of the core cas genes, cas3-cas4-cas1-cas2.	2.60915e-83
NZ_CP011456.1\|WP_053539697.1\|3590489_3591308_+\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|227838	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense mechanisms].	6.75208e-45
NZ_CP011456.1\|WP_053539701.1\|3604511_3605378_+\|carboxylating-nicotinate-nucleotide-diphosphorylase	gnl\|CDD\|236017	PRK07428, PRK07428, carboxylating nicotinate-nucleotide diphosphorylase.	0
NZ_CP011456.1\|WP_081424238.1\|3591583_3591907_+\|four-helix-bundle-protein	gnl\|CDD\|319869	cd16377, 23S_rRNA_IVP_like, 23S rRNA-intervening sequence protein and similar proteins. A family of functionally uncharacterized bacterial proteins, some of which are encoded by an atypically large intervening sequence present within some 23S rRNA genes. The distantly related bAvd protein, which also forms a homopentamer of four-helix bundles, has been suggested to interact with nucleic acids and a reverse transcriptase.	1.5074e-43
NZ_CP011456.1\|WP_053539698.1\|3592709_3593714_+\|type-I-D-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274976	TIGR04093, hypothetical_protein_L8106_25395, CRISPR-associated endonuclease Cas1, subtype CYANO. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes a clade of Cas1 limited to the CYANO subtype of CRISPR/Cas system and most often the type found there.	4.08792e-151
NZ_CP011456.1\|WP_053539694.1\|3586406_3587432_+\|type-I-D-CRISPR-associated-protein-Cas7/Csc2	gnl\|CDD\|375747	pfam18320, Csc2, Csc2 Crispr. The Csc2 Crispr family of proteins forms a core RNA recognition motif-like domain, flanked by three peripheral insertion domains: a lid domain, a Zinc-binding domain and a helical domain. The CRISPR-Cas system is possibly a mechanism of defence against invading pathogens and plasmids that functions analogously to the RNA interference (RNAi) systems in eukaryotes.	3.37425e-165
NZ_CP011456.1\|WP_053539699.1\|3593734_3594007_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	4.09582e-37
NZ_CP011456.1\|WP_053539706.1\|3608878_3609670_-\|PspA/IM30-family-protein	gnl\|CDD\|224755	COG1842, PspA, Phage shock protein A (IM30), suppresses sigma54-dependent transcription [Transcription / Signal transduction mechanisms].	6.90526e-58
NZ_CP011456.1\|WP_053539696.1\|3588186_3590466_+\|type-I-D-CRISPR-associated-helicase-Cas3'	gnl\|CDD\|187841	cd09710, Cas3_I-D, CRISPR/Cas system-associated protein Cas3; Distinct diverged subfamily of Cas3 helicase domain. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Diverged DNA helicase Cas3'; signature gene for Type I and subtype I-D.	9.65511e-142
NZ_CP011456.1\|WP_053539707.1\|3609835_3610546_-\|PspA/IM30-family-protein	gnl\|CDD\|224755	COG1842, PspA, Phage shock protein A (IM30), suppresses sigma54-dependent transcription [Transcription / Signal transduction mechanisms].	5.58659e-47
NZ_CP011456.1\|WP_053539700.1\|3596810_3598046_+\|glycosyltransferase-family-4-protein	gnl\|CDD\|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	2.88717e-42
NZ_CP011456.1\|WP_053539693.1\|3583648_3586378_+\|CRISPR-associated-protein-Csc3	gnl\|CDD\|187843	cd09712, Cas10d_I-D, CRISPR/Cas system-associated protein Cas10d. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins, some contain Zn-finger domain. Fused to N-terminal HD domain; signature gene for I-D subtype; also known as Csc3 family.	6.02945e-06

>NZ_CP011456.1|WP_053539699.1|3593734_3594007_+|CRISPR-associated-endonuclease-Cas2
MNVVVSYDISEDKRRTKIHSILKSYGQWVQYSIFECELTDTQYAKLRSRLNKLIKPETDSIRFYFLCACCFGKIERIGGEQPRDQTIFFA
>NZ_CP011456.1|WP_053539698.1|3592709_3593714_+|type-I-D-CRISPR-associated-endonuclease-Cas1
MGTLYIVQDDAFIGKVDERINVKYEKKILQDVPFIHLEGVVVLGRATISPAVVDELMQRHIPLSFINKIGHYLGRLEPEMTGNIFIRKAQWQAAGETPQSIHLVQGFVRGKLKNYRQTLMRYQREFNDIDLSKSIPRIEQVIAAINSTESINSLRGLEGSGSAAYFGCFDSLIRNSQFSFTKRVRRPATDPVNSLLSFGYSLLRHDLQSAVNIVGFDPYLGYLHFDRYNRPSLALDLMEEFRPLVVDAVVLSILNKQLLTPADFVTEPLSGAVSLTPEGRKTFLTLYEKKKISEFKHPVMGRKCSYREAFELQARLLAKYLMGTIDKYPPLVLK
>NZ_CP011456.1|WP_081424239.1|3591951_3592605_+|CRISPR-associated-protein-Cas4
MFQNEMTNSLPTFTCNLSPVTSDDDYVNIASLNQYSYCPHRCWLIHCAGEFIDNQYTIEGTSLHERVHTVGEQNREETWQIRAIYLKSEQYKLIGKSDLIEFENGGFYPIEYKRGRRGEWDNDELQVCAQALCLEEMTGKNINTGYIYYAQTHQRKLVEITPELRGSTIATIEAIQTLLFTGAMPKAVKTKRCDGCSLYSRCLPQLADKVGRYQEAN
>NZ_CP011456.1|WP_081424238.1|3591583_3591907_+|four-helix-bundle-protein
MTQIGVLYQLASAFPNTEIYRLTSQITRAAASVPANIAEGHARGTTKNDFAHFLSIAKGSLMETETFLMLAVRLNYLTSEQANPTLSLIIEISKMLTSLRSKILNTP
>NZ_CP011456.1|WP_053539697.1|3590489_3591308_+|CRISPR-associated-endoribonuclease-Cas6
MPHSLILNIIPQSPIYPNFLTGRHYHALFLNLVSSVDRKLGDYLHESNADKAFTLSPLQIKSKHKNPFNTLQYAYQNSIPAGTSCWWRISLLNDNLFNQLTPLWLNINPKQPWHLGSANLYITSIQGTPQSNQPWANACNYHQLYQQASEEERNLNFIFSTPVAFRQGAFDNVLPTRESVFNSLLNRWHKYSGIELTNISFESIYASAFNINTEVISNYDNKFIGCLGEISYRILGNAETTTIKQINALADFALYAGIGRKTTMGMGMVRRR
>NZ_CP011456.1|WP_053539696.1|3588186_3590466_+|type-I-D-CRISPR-associated-helicase-Cas3'
MSNQKLVIRLENRSISACASPDELSFMGGKPLQHQIDVFEKSKDADIILNLAPTGTGKTKAGLTVLLHQPTKSAVYIAPTNALIEQQTEAAQKFVKDANLPHVVKSASAKDIKSWPSDKVGNRPGEKLYNVLRNPATVFSDVGANTPILLVTNPDIFYYATFFAYNRLDKGNIASGFYTKFSTVIFDEFHLYDAKQLVGMLFYLAYSHVFKFFQHGRKVVLLTATPEPACELALENLKQAGVRIARIDGEVNNNNLVPSQTTVNLELRPKPDKNEKWIAELAAEVIQRFQENPHENGAVILDSLDNINRLSDLLQNQGFGDYVGRITGPAPKKDRHRAMQCQIILATSTVDVGFNFERTPEPTRQNLDWLIFSARDRSAFWQRIGRVGRVLGKSETNIDSDAIAYLPADAWEQDITSLDTAGGRAALKEMLDNLTCLDKPFLAAYWRSEAFLEIARPLLELEELLENLTGAELISQLFETLRSVLGGNRTWKDYRYRMNVLRGAENIAKKPLKELKKDWKYIKGGQAFVKRFIKVTSPEEWDDLEAGRTTIEEYEKLFKEDEEVLENLKEFAEIFSTSYAPLFSFRSSLFESLPIRDPHGFLLDESEETRLDPFHLLRYYEFIQNGDYIELTHRANETYQLNFRLRYYDSRQQFVNTELNKLTAFKNCQIIRGAGGAIRPTPLIQALNKYLLPGVIICPITNAAAIFQLNRQGITSYPITIVCNDVGKEYRFFAGLSGILTMAMKFKQLRLPDDEVFIA
>NZ_CP011456.1|WP_053539695.1|3587435_3588194_+|type-I-D-CRISPR-associated-protein-Cas5/Csc1
MSTIPFSQAKLIELNCLEPVFFASRELSDTYYTEGLLGNYALTYALGWVNSPYRLQGQATGRPTYKEDFQAIAQSCYILPASPIGRVTFRFERFNALSDAYWYTMTNNRVATAREDLPLQRQGTKPSSFRASNFPQTGRLRMIERGNKFQTLVFGNQQLPDYIRVGKFASKVKVNVLKEFPITLLPEGEYKSQFYLNVADLPRQIEVFAFDLISIPPAPILKNLHFRGAAWQIGEMIVPAGLHYCGRENRNE
>NZ_CP011456.1|WP_053539694.1|3586406_3587432_+|type-I-D-CRISPR-associated-protein-Cas7/Csc2
MSIQKLSPVLATTYENFPKGRFITLIVLRTTHSETIFRTEGSGESMCNEFVQAGVNNDNIIQRLVMTKRKQVAPERRYGREHLRAHELLYTNVKDGSICSLNTNAPCEMCVDCFLYGFAAGGGGAQKSRIWTEDAFSILSATDVVGDRTINAIYENGTMRDEKGNPSTALNTSEYIKPGVHFLDVVTLKDVTADELRYIIGNILFTSRYGAVSSRVGRMENQILGIFGSITELPSSLELVQATYDVLGEPLEHPLNINRVITATKQVITNWQDRRGVSVQLSDEELATLITDVETHWSEAGRDTFLKRLSQSYEPFRQVAPEKNKGKGKGKNKNTQVEVEN
>NZ_CP011456.1|WP_053539693.1|3583648_3586378_+|CRISPR-associated-protein-Csc3
MIKRGRLLNRPPKSLEEIYFSEIRPQLYENHAHHHQYGVRTGTTLAEHLDSACQFILTVSRIAEVAEDKRPLLLAATAVHDLNKLDPQERKVKTLARDKDFLKEQLEKACVLSFVVTDNDLELVRKLIERHSGHSVSDGARFLPEDPNIERWAAMLVAADLFDLGIPDAQRFRKIETELTVAFGRKCNLFRVRLSEDKGYITSLLLGACEEVLQKYGFHPIAIFPDSELFEGGNLPNVDLTKEIATVWQSKIDQVFGNNIEKLVRATKDGIKVTHQAIQQNVDEVLVNIQALLEKKKAGYKSDKVAESVTKWGEDAGEEALEKAAELGLLPVSNAEEFAISEGLKAAYLSYREAGLNPKEVWDKISHHAGISEHQRLALEPFNGQYGRPLFAAKAAINGIEGINESLKESFQLRNNSTETSEEMEVSEEIILAVHRMVNLPFANQLIGINELDAYVEANPRQRCSLGATSSEIDELISANMPPGTKVQAFSNRLPGGISAEPKRQADSIAALAYQLMTVGANFPKVSKQEPLYLHLSLPKGSAPELLRIWRELLKQLAATNTEGGTVTVDQLQLYRDHKLEFKANKVVGAALPKRPDFIHTSVIIPLVWGDVNTSLALLKSLRLGLEISLSLDIGFPFTLSSNMEVDLFDDVYGRVEGIPAALQPLLRNGQYERFKNEKTQEDRNTLSAEEILERLRCLGELAISVASIQKSDDCLYDLARTCDRPIELYFVLLRWILREQDEPNLSIIWSRICQPLNTLMESLMPNENSLLTKYLKEAAQIAAEANLKGSSFKRTAQTEPFTAFITAVKNQKPHLDLEVMFAALTEQYYIRLDRINREYHVGVKKLEQVKHYYNVLRNLYEKVYSARPEKLLSDQKTLEAAYLFFLEEARKQLKNKSEDDSDETNTTV
>NZ_CP011456.1|WP_053539692.1|3583212_3583656_+|DUF86-domain-containing-protein
MNNIDSEIVLSRLRLITKYYNTLVEFNSLSLDEFLGDFRQQLIVERLLQLMTQAAIDINDHILSKLKSGKSYTNFEAFIELGKYQILTPELAKQIAPSSGLRNRLVHEYDDIDPNQVFMAISFALQQYPLYVRQINSYLITLEEEND
>NZ_CP011456.1|WP_053539700.1|3596810_3598046_+|glycosyltransferase-family-4-protein
MENISQLGSQVRHKTAYPDILVISRIFRPDEAVIGEYVYNRCLQDPDRVIVLAGSCAGDKKFDKSQQFPVYRWFNFPACCDHWLGNIIQSGFNIIAAFLLAIKLYFRYHYRYIEWCHGYDFPALLLLSYILPIRFFIYLHGNDLLSVTSNPLWRWLLKLTLNRADGIVCNSSYIRNFLRNTFRLDTPTHVINPVVRSERFGNPTSLSHIDDLRNRIRQIYNIPETAIVILSVGNLVKYKNFNRVIDNIPVLLNFGVDVHCIICGEGSCEIQLKSQAERLRIDQRVHFAGYVPERDLAGYYAACDIFAMLNSDNYEDQTIDNFGMVYLEAGYFGKPVIASRLGSVLDAVHHEENGLLVNPDSGYEVLQTFNRLCQDSQLREKLGRQGRELAKRKTYHRWLYSPESCSSCLLN
>NZ_CP011456.1|WP_081424240.1|3598569_3598749_-|hypothetical-protein
MTTRVPMSSNLKMRIAAHEQLHQEACRPEISRSNRGRKKSTTVLSVGQEADTVPSGQCG
>NZ_CP011456.1|WP_053539701.1|3604511_3605378_+|carboxylating-nicotinate-nucleotide-diphosphorylase
MKSSVAVLPPFLVLDQLLQSWLLEDIGRGDRTTQSLLSQHPTRGEAKWIAKAPGIIAGLPIAARVFQLLNNQVDFVNVTDEGTPCEPGQVIAEINGSLDTLLMGERVALNLVMRLSGIASLTNIYVEKIADLPAQLVDTRKTTPGLRILEKYATALGGAMNHRMGLDDAVMIKDNHIVAAGGIGEAITRIRSHVPYPLTIEVETENLAQVREALQYRADIIMLDNMPLSMMSEAVLLIRNEDDRVKIEASGNVTLETVRAVAETGVDYISTSAPITQSKWLDLSMRMV
>NZ_CP011456.1|WP_053539702.1|3605505_3606690_-|LL-diaminopimelate-aminotransferase
MQFATRLQPLKSNVFADMDTAKSIALAAGRELIDLSLGSSDLPTENHVIEAIAQSLHDPTTHGYLLFRGTQNFRQAAAQWYEQKFGIPVDPETEVLPLIGSQEGTAHLPLAVLNPGDFALLLDPGYPSHAGGVYLASGQIYPMPIKAENNFLPVFSDIPVTILAQSRLMVLSYPHNPTSAIAPLSFFQEAVAFCQQHNIVLVHDFPYVDLVFAEETQNLKSLVPSILQADPEKSVSIEFFTLSKSYNMGGFRIGYAIGNPQLIQALKQIKATVDFNQYIGILNGAIAALTGPQDGVKSAVDIFRQRRDTFIKALHRIGWNVPTPEATMYIWAKLPTQWSRNSIEFCTELVKKTGVAASPGVGFGQFGEGYVRFALVQKPETLKTAVERISQFLY
>NZ_CP011456.1|WP_053539703.1|3606765_3607101_-|thioredoxin
MNKGVITITDAEFETEVLKAEQPVLVYFWASWCGPCQLMSPVINLAANKYSDRLKIVKMETDPNPLTVKQYQVEGLPALRLVRGEQLLVSIEGVIGKDKLLSFLEDHLNNN
>NZ_CP011456.1|WP_053539704.1|3607946_3608291_+|calcium-binding-protein
MLQTPRDVLEKRMHKYVFGVNLITTGLGNDVIYCGASGDFIDGGAGNNVIFAGEGNNRILTGKGNDTIYAGAGNDTIYSGKGVQSTQLRLTTSDKLPDALTQAQPSPIQTPLRV
>NZ_CP011456.1|WP_053539705.1|3608335_3608530_+|hypothetical-protein
MQTAITSTGLKNGQSDFGAANGATVTLLTPNVNTISDRGVILGTADEVRQPNPLATNWNLYLRG
>NZ_CP011456.1|WP_053539706.1|3608878_3609670_-|PspA/IM30-family-protein
MGLFDRLKRVVGANLNDLVSKAEDPEKMLEQALLEMQEDMVKLRQGVAQAIAAQKRTEKQYNEGQNEINKWQRNAQLALQKGDENLARQALERKKTYTDTATALKTSLDQQTVQVEGLKKNLIQLESKISEAKTKKEMLKARITAAKAQEQLQGMVSGMNTSSAMSAFERMEEKVLMQEARAQSGAELASADLDHQFAQLESGSDVDDELAAMKASLAPAPEPKLLTPEQPSPSTPVQPTSTARPAQPVDAELEALRKQLDNL
>NZ_CP011456.1|WP_053539707.1|3609835_3610546_-|PspA/IM30-family-protein
MEVINRILRVIRANFNSLVSNAEDPEKILETAFMEMQENLVQLRQGVAQAIATQKRTERQAAAGESQAAEWYRRAQLALQQGNDSLAREALTKRKFYQETATTLTSQIQQQKDVVAKLKQDMRTLELKLAEVKTKKDMYIARARSAEASYRLQEMLTGTSAISSLGALERMEEKVLQIEAQSEVASTLGGDDLEKKFASLDSHHDIDTELAAMKTYILNQEENPQPDHNLPKTPEP
>NZ_CP011456.1|WP_053539708.1|3610711_3611902_-|hypothetical-protein
MNQNPLIDSTKSPQTPGLNPTLTMALASLEIQLDQELTRYRRTRKNTKSQTARSVESYTNYQTTTLSKEIQLPAVPPVAIPSENSFLTNETETINFPQEFANSDIEETPTPPNLEKSTSSIVPTKIPSSDNPTLLTTNDPPQQPNDYLESSEALLRSLTAVAPQNQTPNSPKSRDSVLSPLGIGSMLLLLLASLTLGYVVFNPKNLPKLNFSSVLNNNSSKTGENTQNTEIIENNSQLTSEPKITPIAKYPNLATQEFRQVRDPKDVVDLTPKVKPTPQIISTPVAIKPPITPISPLPRLSPLSNTLSKSTPLAKPTATFSPLSEDVKPSANGYYYIIADNQGDKALTAAKQVVPDAYLSPNKKFIYLGALKTKDEIKRRLQQLEAKGIKGRLQQP

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Crispr_ID: NZ_CP011456_32

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011456_32

3733826-3734804

TypeI-D

Consensus_repeat	Method
GTTTCCA--------------CATATCTAATCCCCGCAAGGGGACTGAAAC	PILER-CR
GTTTCCACATATCTAATCCCCGCAAGGGGACTGAAAC	CRISPRCasFinder
GTTTCCACATATCTAATCCCCGCAAGGGGACTGAAAC	CRT

13 spacers

cas2,cas1,cas4,cas6,csc1gr5,csc2gr7,cas10d,cas3,WYL

The CRISPR arrays of NZ_CP011456_32

>merge|NZ_CP011456|32|3733826-3734804|PILER-CR,CRISPRCasFinder,CRT
GTTTCCACATATCTAATCCCCGCAAGGGGACTGAAACATTAATGTAGATAATCTTCTCAAGGAGTTAGATAAACGTTTCCACATATCTAATCCCCGCAAGGGGACTGAAACCAATGAAGTTAATCTTCACACTTTCCAGTGCCGAACCAAGTTTCCACATATCTAATCCCCGCAAGGGGACTGAAACTGGGCTGGGGTGAAGTGGGAGGATGATCCGAAAGCGGGTTTCCACATATCTAATCCCCGCAAGGGGACTGAAACAATACTTCTTTGGGTGAAACTTGGGATGATCAGCAGGTTTCCACATATCTAATCCCCGCAAGGGGACTGAAACAGCAATTTGGCTATGGGAACTGATGCCTATGATGGGTTTCCACATATCTAATCCCCGCAAGGGGACTGAAACTTTCAGGAAAATGTGATTGTTGCATCACCAGATATGAGTTTCCACATATCTAATCCCCGCAAGGGGACTGAAACATCTTTGGTGGAGCTAGTCACAATGTCGTAACCGAACGTTTCCACATATCTAATCCCCGCAAGGGGACTGAAACTTACCTCTAGTGAAGTAACTGCTTCTGCGCTTGCGTTTCCACATATCTAATCCCCGCAAGGGGACTGAAACACTACGGGTACATCAGCAGTAAGCGGCACTTTTGTAGTTTCCACATATCTAATCCCCGCAAGGGGACTGAAACAGTTAGCCATCTTAGCTCTGATTGCACTGGGTATTCTTGTTTCCACATATCTAATCCCCGCAAGGGGACTGAAACTACCCTGGATAATATCTATCCACGATCTCAGTTTGCGTTTCCACATAATTAATCCCCGTAAGGGGACTGAAACTTATCAGTTTTTCTACTGCGAGGATCACCAATTTGGTTTCCACATAATTAATCCCGGCAAGGGGACTGAAACAGCGATCGCTATTTACATCTCCAAGTTTCTTATTACTTAATCCCCACAAGGGGACTAAAAG

>NZ_CP011456|32|4|3733826-3734598|PILER-CR
GTTTCCACATATCTAATCCCCGCAAGGGGACTGAAAC	ATTAATGTAGATAATCTTCTCAAGGAGTTAGATAAAC
GTTTCCACATATCTAATCCCCGCAAGGGGACTGAAAC	CAATGAAGTTAATCTTCACACTTTCCAGTGCCGAACCAA
GTTTCCACATATCTAATCCCCGCAAGGGGACTGAAAC	TGGGCTGGGGTGAAGTGGGAGGATGATCCGAAAGCGG
GTTTCCACATATCTAATCCCCGCAAGGGGACTGAAAC	AATACTTCTTTGGGTGAAACTTGGGATGATCAGCAG
GTTTCCACATATCTAATCCCCGCAAGGGGACTGAAAC	AGCAATTTGGCTATGGGAACTGATGCCTATGATGG
GTTTCCACATATCTAATCCCCGCAAGGGGACTGAAAC	TTTCAGGAAAATGTGATTGTTGCATCACCAGATATGA
GTTTCCACATATCTAATCCCCGCAAGGGGACTGAAAC	ATCTTTGGTGGAGCTAGTCACAATGTCGTAACCGAAC
GTTTCCACATATCTAATCCCCGCAAGGGGACTGAAAC	TTACCTCTAGTGAAGTAACTGCTTCTGCGCTTGC
GTTTCCACATATCTAATCCCCGCAAGGGGACTGAAAC	ACTACGGGTACATCAGCAGTAAGCGGCACTTTTGTA
GTTTCCACATATCTAATCCCCGCAAGGGGACTGAAAC	AGTTAGCCATCTTAGCTCTGATTGCACTGGGTATTCTT
GTTTCCACATATCTAATCCCCGCAAGGGGACTGAAAC

>NZ_CP011456|32|31|3733826-3734804|CRISPRCasFinder
GTTTCCACATATCTAATCCCCGCAAGGGGACTGAAAC	ATTAATGTAGATAATCTTCTCAAGGAGTTAGATAAAC
GTTTCCACATATCTAATCCCCGCAAGGGGACTGAAAC	CAATGAAGTTAATCTTCACACTTTCCAGTGCCGAACCAA
GTTTCCACATATCTAATCCCCGCAAGGGGACTGAAAC	TGGGCTGGGGTGAAGTGGGAGGATGATCCGAAAGCGG
GTTTCCACATATCTAATCCCCGCAAGGGGACTGAAAC	AATACTTCTTTGGGTGAAACTTGGGATGATCAGCAG
GTTTCCACATATCTAATCCCCGCAAGGGGACTGAAAC	AGCAATTTGGCTATGGGAACTGATGCCTATGATGG
GTTTCCACATATCTAATCCCCGCAAGGGGACTGAAAC	TTTCAGGAAAATGTGATTGTTGCATCACCAGATATGA
GTTTCCACATATCTAATCCCCGCAAGGGGACTGAAAC	ATCTTTGGTGGAGCTAGTCACAATGTCGTAACCGAAC
GTTTCCACATATCTAATCCCCGCAAGGGGACTGAAAC	TTACCTCTAGTGAAGTAACTGCTTCTGCGCTTGC
GTTTCCACATATCTAATCCCCGCAAGGGGACTGAAAC	ACTACGGGTACATCAGCAGTAAGCGGCACTTTTGTA
GTTTCCACATATCTAATCCCCGCAAGGGGACTGAAAC	AGTTAGCCATCTTAGCTCTGATTGCACTGGGTATTCTT
GTTTCCACATATCTAATCCCCGCAAGGGGACTGAAAC	TACCCTGGATAATATCTATCCACGATCTCAGTTTGC
GTTTCCACATAATTAATCCCCGTAAGGGGACTGAAAC	TTATCAGTTTTTCTACTGCGAGGATCACCAATTTG
GTTTCCACATAATTAATCCCGGCAAGGGGACTGAAAC	AGCGATCGCTATTTACATCTCCAA
GTTTCTTATTACTTAATCCCCACAAGGGGACTAAAAG

>NZ_CP011456|32|5|3733826-3734804|CRT
GTTTCCACATATCTAATCCCCGCAAGGGGACTGAAAC	ATTAATGTAGATAATCTTCTCAAGGAGTTAGATAAAC
GTTTCCACATATCTAATCCCCGCAAGGGGACTGAAAC	CAATGAAGTTAATCTTCACACTTTCCAGTGCCGAACCAA
GTTTCCACATATCTAATCCCCGCAAGGGGACTGAAAC	TGGGCTGGGGTGAAGTGGGAGGATGATCCGAAAGCGG
GTTTCCACATATCTAATCCCCGCAAGGGGACTGAAAC	AATACTTCTTTGGGTGAAACTTGGGATGATCAGCAG
GTTTCCACATATCTAATCCCCGCAAGGGGACTGAAAC	AGCAATTTGGCTATGGGAACTGATGCCTATGATGG
GTTTCCACATATCTAATCCCCGCAAGGGGACTGAAAC	TTTCAGGAAAATGTGATTGTTGCATCACCAGATATGA
GTTTCCACATATCTAATCCCCGCAAGGGGACTGAAAC	ATCTTTGGTGGAGCTAGTCACAATGTCGTAACCGAAC
GTTTCCACATATCTAATCCCCGCAAGGGGACTGAAAC	TTACCTCTAGTGAAGTAACTGCTTCTGCGCTTGC
GTTTCCACATATCTAATCCCCGCAAGGGGACTGAAAC	ACTACGGGTACATCAGCAGTAAGCGGCACTTTTGTA
GTTTCCACATATCTAATCCCCGCAAGGGGACTGAAAC	AGTTAGCCATCTTAGCTCTGATTGCACTGGGTATTCTT
GTTTCCACATATCTAATCCCCGCAAGGGGACTGAAAC	TACCCTGGATAATATCTATCCACGATCTCAGTTTGC
GTTTCCACATAATTAATCCCCGTAAGGGGACTGAAAC	TTATCAGTTTTTCTACTGCGAGGATCACCAATTTG
GTTTCCACATAATTAATCCCGGCAAGGGGACTGAAAC	AGCGATCGCTATTTACATCTCCAA
GTTTCTTATTACTTAATCCCCACAAGGGGACTAAAAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011456.1\|WP_053539791.1\|3722906_3723854_-\|WYL-domain-containing-protein	WYL	pfam13280_WYL_CAS-I:CAS-III	gnl\|CDD\|379100
NZ_CP011456.1\|WP_053539806.1\|3743551_3744052_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053539803.1\|3739703_3740276_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053541309.1\|3736545_3736734_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053539793.1\|3726028_3728968_+\|type-I-D-CRISPR-associated-protein-Cas10d/Csc3	cas10d	cd09712_cas10d_CAS-I-D	gnl\|CDD\|187843
NZ_CP011456.1\|WP_053539798.1\|3732347_3733325_+\|type-I-D-CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|274976
NZ_CP011456.1\|WP_053539800.1\|3734846_3735986_+\|CRISPR-associated-endoribonuclease-Cas6	cas6	COG5551_cas6_CAS-III	gnl\|CDD\|227838
NZ_CP011456.1\|WP_053539794.1\|3728980_3730000_+\|type-I-D-CRISPR-associated-protein-Cas7/Csc2	csc2gr7	cd09709_csc2gr7_CAS-I-D	gnl\|CDD\|375747
NZ_CP011456.1\|WP_081424381.1\|3730814_3731582_+\|CRISPR-associated-endoribonuclease-Cas6	cas6	pfam10040_cas6_CAS-III:CAS-IV	gnl\|CDD\|273848
NZ_CP011456.1\|WP_053539790.1\|3720154_3721588_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053541310.1\|3737977_3738364_+\|nuclease	unknown	unknown	gnl\|CDD\|369598
NZ_CP011456.1\|WP_053539801.1\|3735989_3736448_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053539805.1\|3742511_3743465_+\|nucleotidyl-transferase-AbiEii/AbiGii-toxin-family-protein	unknown	unknown	gnl\|CDD\|378065
NZ_CP011456.1\|WP_053539804.1\|3740666_3741629_-\|tyrosine-type-recombinase/integrase	unknown	unknown	gnl\|CDD\|274042
NZ_CP011456.1\|WP_053539792.1\|3723904_3726025_+\|type-I-D-CRISPR-associated-helicase-Cas3'	cas3	cd09710_cas3_CAS-I-D	gnl\|CDD\|187841
NZ_CP011456.1\|WP_039204260.1\|3740285_3740627_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053539795.1\|3730087_3730810_+\|type-I-D-CRISPR-associated-protein-Cas5/Csc1	csc1gr5	cd09711_csc1gr5_CAS-I-D	gnl\|CDD\|274458
NZ_CP011456.1\|WP_053539802.1\|3738360_3739203_-\|DNA/RNA-non-specific-endonuclease	unknown	unknown	gnl\|CDD\|224777
NZ_CP011456.1\|WP_053539797.1\|3731759_3732344_+\|CRISPR-associated-protein-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	gnl\|CDD\|273040
NZ_CP011456.1\|WP_053539799.1\|3733321_3733615_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856

Protein	Function_ID	Function_description	E-value
NZ_CP011456.1\|WP_053539791.1\|3722906_3723854_-\|WYL-domain-containing-protein	gnl\|CDD\|379100	pfam13280, WYL, WYL domain. WYL is a Sm-like SH3 beta-barrel fold containing domain. It is a member of the WYL-like superfamily, named for three conserved amino acids found in a subset of the superfamily. However, these residues are not strongly conserved throughout the family. Rather, the conservation pattern includes four basic residues and a position often occupied by a cysteine, which are predicted to line a ligand-binding groove typical of the Sm-like SH3 beta-barrels. A WYL domain protein (sll7009) is a negative regulator of the I-D CRISPR-Cas system in Synechocystis sp. It is predicted to be a ligand-sensing domain that could bind negatively charged ligands, such as nucleotides or nucleic acid fragments, to regulate CRISPR-Cas and other defense systems such as the abortive infection AbiG system.	7.19868e-15
NZ_CP011456.1\|WP_053539793.1\|3726028_3728968_+\|type-I-D-CRISPR-associated-protein-Cas10d/Csc3	gnl\|CDD\|187843	cd09712, Cas10d_I-D, CRISPR/Cas system-associated protein Cas10d. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins, some contain Zn-finger domain. Fused to N-terminal HD domain; signature gene for I-D subtype; also known as Csc3 family.	0
NZ_CP011456.1\|WP_053539798.1\|3732347_3733325_+\|type-I-D-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274976	TIGR04093, hypothetical_protein_L8106_25395, CRISPR-associated endonuclease Cas1, subtype CYANO. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes a clade of Cas1 limited to the CYANO subtype of CRISPR/Cas system and most often the type found there.	1.97746e-151
NZ_CP011456.1\|WP_053539800.1\|3734846_3735986_+\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|227838	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense mechanisms].	6.49378e-54
NZ_CP011456.1\|WP_053539794.1\|3728980_3730000_+\|type-I-D-CRISPR-associated-protein-Cas7/Csc2	gnl\|CDD\|375747	pfam18320, Csc2, Csc2 Crispr. The Csc2 Crispr family of proteins forms a core RNA recognition motif-like domain, flanked by three peripheral insertion domains: a lid domain, a Zinc-binding domain and a helical domain. The CRISPR-Cas system is possibly a mechanism of defence against invading pathogens and plasmids that functions analogously to the RNA interference (RNAi) systems in eukaryotes.	2.29886e-173
NZ_CP011456.1\|WP_081424381.1\|3730814_3731582_+\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|273848	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This broadly distributed, highly divergent Cas family is now characterized as an endoribonuclease that generates guide RNAs for host defense against phage and other invaders. The family contains a C-terminal motif GXGXXXXXGXG, where the each X between two Gly is hydrophobic and the spacer XXXXX contains (usually) one Arg or Lys. The seed alignment for the current version of this model has gappy columns removed. Members of this protein family are found associated with several different CRISPR/cas system subtypes, and consequently we designate this family Cas6.	6.94573e-17
NZ_CP011456.1\|WP_053541310.1\|3737977_3738364_+\|nuclease	gnl\|CDD\|369598	pfam07924, NuiA, Nuclease A inhibitor-like protein. This family consists of protein sequences that are similar to the nuclease A inhibitor expressed by bacteria of the genus Anabaena ((NuiA). This sequence is organized to form an alpha-beta-alpha sandwich fold, which is similar to the PR-1-like fold. NuiA interacts with nuclease A by means of residues located at one end of the molecule, including residues making up the loop between helices III and IV and the loop between strands C and D. The mechanism of inhibition of nuclease A by NuiA is as yet incompletely understood.	4.3076e-56
NZ_CP011456.1\|WP_053539805.1\|3742511_3743465_+\|nucleotidyl-transferase-AbiEii/AbiGii-toxin-family-protein	gnl\|CDD\|378065	pfam08843, AbiEii, Nucleotidyl transferase AbiEii toxin, Type IV TA system. This family was recently identified as belonging to the nucleotidyltransferase superfamily. AbiEii is the cognate toxin of the type IV toxin-antitoxin 'innate immunity' bacterial abortive infection (Abi) system that protects bacteria from the spread of a phage infection. The Abi system is activated upon infection with phage to abort the cell thus preventing the spread of phage through viral replication. There are some 20 or more Abis, and they are predominantly plasmid-encoded lactococcal systems. TA, toxin-antitoxin, systems on plasmids function by killing cells that lose the plasmid upon division. AbiE phage resistance systems function as novel Type IV TAs and are widespread in bacteria and archaea. The cognate antitoxin is pfam13338.	4.22132e-13
NZ_CP011456.1\|WP_053539804.1\|3740666_3741629_-\|tyrosine-type-recombinase/integrase	gnl\|CDD\|274042	TIGR02224, Tyrosine_recombinase_XerC, tyrosine recombinase XerC. The phage integrase family describes a number of recombinases with tyrosine active sites that transiently bind covalently to DNA. Many are associated with mobile DNA elements, including phage, transposons, and phase variation loci. This model represents XerC, one of two closely related chromosomal proteins along with XerD (TIGR02225). XerC and XerD are site-specific recombinases which help resolve chromosome dimers to monomers for cell division after DNA replication. In species with a large chromosome and homologs of XerC on other replicons, the chomosomal copy was preferred for building this model. This model does not detect all XerC, as some apparent XerC examples score in the gray zone between trusted (450) and noise (410) cutoffs, along with some XerD examples. XerC and XerD interact with cell division protein FtsK. [DNA metabolism, DNA replication, recombination, and repair].	1.64027e-29
NZ_CP011456.1\|WP_053539792.1\|3723904_3726025_+\|type-I-D-CRISPR-associated-helicase-Cas3'	gnl\|CDD\|187841	cd09710, Cas3_I-D, CRISPR/Cas system-associated protein Cas3; Distinct diverged subfamily of Cas3 helicase domain. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Diverged DNA helicase Cas3'; signature gene for Type I and subtype I-D.	4.06015e-60
NZ_CP011456.1\|WP_053539795.1\|3730087_3730810_+\|type-I-D-CRISPR-associated-protein-Cas5/Csc1	gnl\|CDD\|274458	TIGR03159, cas_Csc1, CRISPR type I-D/CYANO-associated protein Csc1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This protein family is a CRISPR-associated (Cas) family strictly associated with the Cyano subtype of CRISPR/Cas locus, found in several species of Cyanobacteria and several archaeal species. This family is designated Csc1 for CRISPR/Cas Subtype Cyano protein 1, as it is often the first gene upstream of the core cas genes, cas3-cas4-cas1-cas2.	2.07033e-64
NZ_CP011456.1\|WP_053539802.1\|3738360_3739203_-\|DNA/RNA-non-specific-endonuclease	gnl\|CDD\|224777	COG1864, NUC1, DNA/RNA endonuclease G, NUC1 [Nucleotide transport and metabolism].	2.42673e-83
NZ_CP011456.1\|WP_053539797.1\|3731759_3732344_+\|CRISPR-associated-protein-Cas4	gnl\|CDD\|273040	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4. This model represents a family of proteins associated with CRISPR repeats in a wide set of prokaryotic genomes. This scope of this model has been broadened since it was first built to describe an archaeal subset only. The function of the protein is undefined. Distantly related proteins, excluded from this model, include ORFs from Mycobacteriophage D29 and Sulfolobus islandicus filamentous virus and a region of the Schizosaccharomyces pombe DNA replication helicase Dna2p.	1.71727e-34
NZ_CP011456.1\|WP_053539799.1\|3733321_3733615_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	2.23984e-28

>NZ_CP011456.1|WP_053539799.1|3733321_3733615_+|CRISPR-associated-endonuclease-Cas2
MTTLFYLIIYDLPDNKAANKRRTRLHKMLSGYGKWTQYSVFECFLTAVQFAQLQAKIEKLIKSDEDSIRMYVLDAGSVKRTITYGSEIPRQEQAIII
>NZ_CP011456.1|WP_053539798.1|3732347_3733325_+|type-I-D-CRISPR-associated-endonuclease-Cas1
MTTLYIIQPDAVLSKDYEAFQVALKQEDGSWKKQKVAAQTVDEVILMGNPQVTGDAFVYALELGMPVHYLSSFGKYLGSALPKSSRNGQLRLAQYAVYHDPVRRLELVKAIVTAKIHNQYNVLYRHNEKDNPLKERKVLVKTQQNIDQVRGVEGLAAKEYFACWQRMIGKQWTFNGRNRRPPTDPVNSLLSFAYALLQGQVMAGVHVAGLDPYIGYLHEVHHGQPAMVLDLMEEFRALIADNLVLSLLHKHEIKPKDFNESLGAYRLKDNARKTFLKAFDQKMNDEFKHPVFDYRCTYRRAIELQARLLSRHLQEGVPYKPLSLR
>NZ_CP011456.1|WP_053539797.1|3731759_3732344_+|CRISPR-associated-protein-Cas4
MNEDYLPLAYLNAWEYCPRRFYLEYVLGEMADNEHIILGRHVHRNINEEGTFQEGETLIHQQQWVWSERLKVSGIIDAVEEYDGQLVPVEYKKGKMAQHLNDHFQVCAAALCLEERTGRTITYGEIFYHANRRRQTVAFTPQLRQMTEQAIALAHVASQNKMPAPIDHPKKCQSCSLQGICLPFEVKQLQRQEY
>NZ_CP011456.1|WP_081424381.1|3730814_3731582_+|CRISPR-associated-endoribonuclease-Cas6
MTLQSLVIQLGAASESTIPTTLGRAIHAQVMQWLSLGDAQIATAVHDSQESPLSLSGLIGYRRKQGIQLGDDFVVRISLLDSNLIQPLLQGIESSHNKSIYLGKCPFVIRSIYSLPGTHPLVDSSDYTILANTSVSSDITLQFLSPTSFKQNQNIQPFPLPDLVFNSLLRRWNRFAPAELQFPQVEWQGLVSAFELKTHALKMEAGAEIGTVGWIKYRFPNPEEARIATILANFAVFSGVGRKTAMGMGQVKIKN
>NZ_CP011456.1|WP_053539795.1|3730087_3730810_+|type-I-D-CRISPR-associated-protein-Cas5/Csc1
MIFYQCDLTLHDNVFFASREMGILYETEKYLHNWALSFAFFETAYIPRPYRLKGINAQKPSYLDSSQEQNLLHLNEAGIYVFPALPITWSYQVNTFKAAQVSYYGKSAQFGGEGAKRNYPVNYGRAKELAVGSHYKTYIIAHETIKIPRWIRLGKWSSKIRIEKREITDIKEKSGQYITKHPLNPLDLSSSTKLLLYNRIVMPPASLVSQAQLTGDYYELPDKTCLPVGVAYGASTVVSS
>NZ_CP011456.1|WP_053539794.1|3728980_3730000_+|type-I-D-CRISPR-associated-protein-Cas7/Csc2
MNLTTLKSEFHPAFPRLASGKYIHFIMLRHSQSFSVFQTDGVLNTARTQAGLDPKNQQSMSRLVMFKRKQVSPERLVGRELLRSLNFINSEDKKAENFCRYGSEQFCGKCPDCIIYGFAVGDSGSERSKLYSDSAFSLTPYEDSHKSLTFNALSETGTMMLDYDDPKRTDNNKVRSSINELDHVLPEVTFPTVETLRDPTFEGFLYVLGNLMRTRRYGAQESRTGTMSNHIIGIVLCDGEIFSNLHLTQALYDALKPDINAPIVDIIAKAAEVTTNLLNQEPVRKTQVIMGSQLTDLLGETLAIYQNETALQNTLTTLYQQTKTYAETYGAVAKKGKGK
>NZ_CP011456.1|WP_053539793.1|3726028_3728968_+|type-I-D-CRISPR-associated-protein-Cas10d/Csc3
MPTLLQTLLIETLSEDTDPILRLFIDTILPAMEREFGLIPAMGGSEIVHYQNLVKQGDKYAQENAKRWANKPDQSLLVHVLNGLLTAWNLSVHLPQNLQLNPVEKKLLCLGLTLHDYNKYVRGQGEEQPPPKAHEIDDIINLCRDLGTKLNFQEFWEEWSKYLLEIAFLAQNTQFSVDSNPVISNWENDQREFTIDDRRLNDVLRHLLAFGDVAVHISDPAEIVTSTKGDRLRDHLYWLNIPKKLVYHRLRDCRGLITNQIHNAVVNFARQLGWEEILCFAQGVIYLAPSDSDIPDLTEIQTAVWENLIYGDEENNQKGLAAYFQSGDVGFVRDGKGVKIAPQTLELFSSGDLIRLLPEVVQVKVANAKVPATPKRLDKLTLNDTERTFLLKGADIRADRLAELIILTQRKFFEGSQDYITWILTTLELQNQITLEQTQVQFGGVNYGWYQVAAHYIADHATLDEQQIREYLQELSNKLATWATENALLKETANPTHEAFIKYLGQYLEICPNHQASEFENELAAYSNAKVTNQPICSLSSGESQAEEQLDTVVLFKPQQYSNKNALGGGRIKRGISKIWALEMLLRQAIWAAPPGKLEEQQPVFLYIFPAYVYSPQVARAVKALVQEFKRVNLWEVRKHWLDAGMHHDGLQNLPWREESEAGRFSRNYSTKDLPFMAMTYTTTRGKTVTDAWVEPIYLTLALPLLLGVKVVATSSPDPLYASDQEFSESAILDGAAGFWQLFGTPQNLRIQDLSPALNRLLIAYSLHLDNRSKKPDARWQALNGTVRDLVTDVLNIFAIANEGFRNTKKEPGTEDVKRIWNYAQTWVKGDPNMEDKMDLIKRLVTEYRQFYQVNVSESSHAILLPISKALEIILKVPEDITKEDLILEVAGQLYDALERQRVYKPYLVDKSTDYKTRKEQELTAIHQFTSTCVNDLFLGLYKGDRALLQENRNRIKSGVEFAYRWLALQSKNTEKPES
>NZ_CP011456.1|WP_053539792.1|3723904_3726025_+|type-I-D-CRISPR-associated-helicase-Cas3'
MKVSLLPQYSKLNPGVGTCPLQCIQTCKVKQQAPNFGEGDHCPLSSHQAETYAAITNSDADIIFNKSATGDGKSLAAYLASLLNNWLRVIGLYPTIELVTDQERQIYGYFEQFNPQGIDGVDSLYGAKLAQLVEQGEKSNKFKELLFIFKQKYVILTNPDIFHLVTHFRYHNPAYNRAELPIILARNLDLYIADEFHIFGVHQEAAILNSLLLIRHNRPKRRPMKFLFTSATPKPDFIKKLKQSGFKVKEIAGDYVSQPTSGYRQICQAVNLEFIPLEQDSDSLTWLTQQAPNIRNILQIEGRGRGLIILNSVALVSRTVRELQKLIPDIIVCEVSGRIDRQERSVTHTALKDADKPVLVVGTSAVDVGVDFRIHLLIFEASDSATIIQRLGRLGRHAGFSDYQAFVLLSSRTPWIKSRLEKELTNSEYDRLQFREIIEEVFNPTKDFEQYRNYWGALQAQGMLFSMSNKKQGVMQPLQDKIAEDLRLVYGEQLDKKRGHWYALSNDKTGVGKAVQEELLRFRGGSDLQAAVWDQGRFYTYDLLKLLPWAEVEIVDRDDFLKAAKQANHPHTEFPDKYIQVYLKIQRWSDTRFPVGLECDRLNDELKQCTLSFIDKLSITGHPQTEVSRCLRNRKLLAFLVQVNRSQANSHWEITRNLYLSHTFGLYRLKDADGQFHACAFNQDALLLEAIKWKIKPCERSKPYIF
>NZ_CP011456.1|WP_053539791.1|3722906_3723854_-|WYL-domain-containing-protein
MSSKNDNNSNQLGFMLELLKLLAEKPCKKAELEILLSDRGFEAGDLSQKIARAIGKLRDCGFEIKAAPNRPYELVTSVFPVILSEEQRQALAMASELLASLGFSAEAGHIHRIGNFQKPKSPGLRTDFHPPTDYSEDKINEVVRQLQQRFQQKRRFVVWYRSRKGKETFWDLDKSELRLHNGVLYLFALVPDFRSSHLETRPNAEQNITLRVDRITRVGGVSQTPWTYSKFPTLDITYRLTGDLASYRPRRPHETVISSLETTEYVDILTQEDCIFWFRQRMLQYGASARVLNPDWVAKGVKDALKKAYDNYCVE
>NZ_CP011456.1|WP_053539790.1|3720154_3721588_-|hypothetical-protein
MGLRSRYWQLVKIDAAGRRQIQEITPAKAFFLDMFPTATVNDDLPDVEINKKLLQLSQNIPADRCLLAERCLLCFISWQIEQVCLQLEAKFGTVHGFKCVDLLLCVLDDDGKLKPVGDYQSFSRQILQSFDPEKSNLTTWTNTRVKQNHRLNQFLLECGVYLVSDWAILNDTKPKQLQRIFTEFYSFTAGEILQAQQLLESYHDIYRTARLEQRGKKREDSLEQPPKRRGGKCTIPTIQQLQAIATLLQSKIGQNLSSEIVMAQLQKLAEQLRQYRIHVRGGSLLAESLDVVAGDGYGEGIAGYTNTTEVVNDGDEQTEFLQLYRSQFMASLQQALAIVTQRRVEQLQRKKGDKAKKFLFALQLFHCQNLSMTEIAAKVGLRAQDAVTRFLKLKDFRADVRQELLIMLCNSVMELAKNYSHPDSLQTLEGKIQLALNEQINHVIEAAEIQAQTAKTLTPETSIFNQRLCCYLDDIIN
>NZ_CP011456.1|WP_053539800.1|3734846_3735986_+|CRISPR-associated-endoribonuclease-Cas6
MSELATSSNRKNPSKNTPLIWADDTELVSLVFDLEVTDSTALYSQYTIGLHAWFLDQVRQINPTLSAYLHDGESEKPFSISALEGQLLPTGKQLQLQSNQIYRWQINAISQPVVQFLSQWLIQPPTTLKLRDACLQVKQISIVNPPTTYNKLLQSSINHKNINLSFISPTSFRRKGHHFPLPVPFNLFHSYLRRWNDFSGMPIEQDGFLEWIDENVIIHKHRLESVKVAAGKRGSVTGFTGAISLGLTKTALNNIEFTQLFYALVQLAPYCGTGHKTTFGLGQTCLDWVNPESNISSTAITNLLPERIEELTTIFTAQRKRIGGERTEKIATTWATILARREMGESLQIIAEDLEIPYTTAKTYVKLARRMLKDMQSNV
>NZ_CP011456.1|WP_053539801.1|3735989_3736448_-|hypothetical-protein
MHKQIKKIVFLVTSTSIMNLSLPQVSIAAPKGFKTPSGNMFCELIEGSDTNTNSLRCEIASSLKPKPPQPYPGYCEFDWGRGFLLPATSKPEILCISDTIADPNKSVLGYGKTWNNGGFKCVSQKTGLTCTNSNNIGFFLSRQKWRVLGISK
>NZ_CP011456.1|WP_053541309.1|3736545_3736734_-|hypothetical-protein
MFTKIDSVTIINNVTLLVFYTEAHCWQFRLISAGGEVFGERKLYYTPEAAEKAGREWIFQGS
>NZ_CP011456.1|WP_053541310.1|3737977_3738364_+|nuclease
MTNITNILKQATDGLLMTSESEYPFEVFAWESAVLNEATVLKKTGHSQETPVKLVEIDDFFRNSVTAEDWHEDEEKATVKKFQNLVNLLKTNLIDLQVYKIGNREIDVYITGNTPDGIAGVSTKVIET
>NZ_CP011456.1|WP_053539802.1|3738360_3739203_-|DNA/RNA-non-specific-endonuclease
MIKFIKVLKVRFLISFAIGLLICSPAQAQTLELEPELLARNIPSVHLLLGNPSQATTNINNPDNDLMIKPQYVLSYNRSNGTPNWVSWQLNKSWFGDAPRQDNFRPDNTLPEGWERIKPTAYNGSGYDRGHITPSADRTRSIEDNTATFLMSNMMPQTPDNNRNTWGNLEDYSRELVSQGKELYIIAGPVGSKGKLKNLVTIPQSTWKIVVVLDPDAGLKGITANTRVIAVNIPNDEQLDNNWKVFRTSVDTLEKLTGYDFLSNVSPNIQRVIESKVDDL
>NZ_CP011456.1|WP_053539803.1|3739703_3740276_+|hypothetical-protein
MNNKTLPSEMIRVPTVLIPVVRQLAKIHRDGHTTALLQGLQELIAQFDSSVKLEATSELQQVEEKLGELETHLCQQDQQVATKLEVLGKQLEKIEKAIASLAGGIASGRYSGGNSRQRYSGYQYQQQPVEITSFANENLAQRLGVTPQSLITERESKSEQEFISWSRNRDPSSLGWKFQVSDGLYYPVKQ
>NZ_CP011456.1|WP_039204260.1|3740285_3740627_-|hypothetical-protein
MAKGFGVKPEKQLGYILQLIPEVKAYAVRFNYNDFHEKTGEEFIGVTSMLHEAQVWKKKEQAKQSIEKYSDFLLEKVEAGSQVRVDIKQLKRSSDGKLTDELVESLLFLPEKN
>NZ_CP011456.1|WP_053539804.1|3740666_3741629_-|tyrosine-type-recombinase/integrase
MNESPEIGEITVVNSLALTAPTPLTEHPAAVYLSNLSAGSRPAMEQSLNAIAKILTSNECDALTLNWAELRYKHTALLRCILMERYAPATANKMLSALRRVLKEALRLELMDARDFARAVDIANIKLSKELKGRFLSETEINALMQTCFDDPTPIGYRDAALIAILRGAGLRRGESVKLMLSDFHSGSVKVRSGKGGKDRTVYLPDGVLPIIEDWLEIRGREAGALICHINKAGAVTLRQLTPQAVLFILEKRGAEAGVTNFSAHDFRRTFISELLDSTDIVTVQKLAGHASPELTSRYDRRGEEVQQRAVQAINVPKRK
>NZ_CP011456.1|WP_053539805.1|3742511_3743465_+|nucleotidyl-transferase-AbiEii/AbiGii-toxin-family-protein
MLIRLQIKTPEKLPFLEKLCWQRENIENLTPLEMLRIYERGWHYRGVLGNLSHTEALFVQQLAQYYHSWLGAKMFEREFHQKILIVLNQLKANFLLECGAYFGGGTLVSLNHGEYRLSKDIDFLCSTGTGYRLLRQKIAENQYNALFNTQNNLKLPGEIKADQYGVRFAIVVDETLIKFEIIMEGRIELGEADYPSWSPVPCLNQIDSFAEKLLANSDRWNDSSVESRDLIDLAMQRLNSPIPQAAIEKAELAYPVIEPLKKAIAFFQNHPNYRDKCFTALRIAEPSKIIDGIDLMAADFNLNKTPRTFSESQQDWE
>NZ_CP011456.1|WP_053539806.1|3743551_3744052_-|hypothetical-protein
MARKSKDFKDLMKQKQSSQDKQKNLEALRKKMVEGGFGELAANIPIEPKGAPKMSEILQQFVAPYLDNVHTSKRRKSLFSLAVIAWNAAVMPESQQKTTLDTFLEQQLSNQDTETQQAITQMIDELIARKHQHFSDNKYFILDFQITETGQRYDISVASTLWENPQ

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Crispr_ID: NZ_CP011456_33

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011456_33

3826837-3826951

TypeV

Consensus_repeat	Method
AAATCCTGATTCAGACAATTAATCACCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP011456_33

>merge|NZ_CP011456|33|3826837-3826951|CRISPRCasFinder
AAATCCTGATTCAGACAATTAATCACCGTCAAATTAGCAACCTCATCTGCAAACAGATCCCTCATCCTGTAAATCCTGAAATCCTGTAAATCCTGATTCAGACAATTAATCACCG

>NZ_CP011456|33|32|3826837-3826951|CRISPRCasFinder
AAATCCTGATTCAGACAATTAATCACCG	TCAAATTAGCAACCTCATCTGCAAACAGATCCCTCATCCTGTAAATCCTGAAATCCTGT
AAATCCTGATTCAGACAATTAATCACCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011456.1\|WP_053539863.1\|3828704_3829247_-\|DUF3172-domain-containing-protein	unknown	unknown	gnl\|CDD\|371494
NZ_CP011456.1\|WP_027401799.1\|3835828_3836035_+\|type-II-toxin-antitoxin-system-HicB-family-antitoxin	unknown	unknown	gnl\|CDD\|224514
NZ_CP011456.1\|WP_053539859.1\|3822913_3823954_-\|3-deoxy-7-phosphoheptulonate-synthase	unknown	unknown	gnl\|CDD\|237376
NZ_CP011456.1\|WP_052149955.1\|3827091_3827766_+\|AMIN-domain-containing-protein	unknown	unknown	gnl\|CDD\|378705
NZ_CP011456.1\|WP_081424384.1\|3820612_3821494_+\|septum-site-determining-protein-MinC	unknown	unknown	gnl\|CDD\|179052
NZ_CP011456.1\|WP_053539857.1\|3818676_3820005_+\|four-carbon-acid-sugar-kinase-family-protein	unknown	unknown	gnl\|CDD\|225930
NZ_CP011456.1\|WP_053539865.1\|3830676_3831735_-\|fatty-acid-desaturase	unknown	unknown	gnl\|CDD\|215323
NZ_CP011456.1\|WP_053539856.1\|3814673_3816647_+\|SUMF1/EgtB/PvdO-family-nonheme-iron-enzyme	unknown	unknown	gnl\|CDD\|224182
NZ_CP011456.1\|WP_053539869.1\|3834574_3835774_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223966
NZ_CP011456.1\|WP_081424256.1\|3819969_3820245_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053539864.1\|3829409_3830486_-\|fatty-acid-desaturase	unknown	unknown	gnl\|CDD\|215275
NZ_CP011456.1\|WP_027404040.1\|3822547_3822853_+\|cell-division-topological-specificity-factor-MinE	unknown	unknown	gnl\|CDD\|184441
NZ_CP011456.1\|WP_053539868.1\|3834142_3834520_+\|GxxExxY-protein	unknown	unknown	gnl\|CDD\|372581
NZ_CP011456.1\|WP_053539854.1\|3811553_3812417_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|369035
NZ_CP011456.1\|WP_053539866.1\|3831965_3832781_-\|acyl-CoA-desaturase	unknown	unknown	gnl\|CDD\|224316
NZ_CP011456.1\|WP_053539862.1\|3827860_3828589_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376437
NZ_CP011456.1\|WP_053539860.1\|3824274_3825609_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053539855.1\|3812483_3813818_-\|S41-family-peptidase	unknown	unknown	gnl\|CDD\|223864
NZ_CP011456.1\|WP_053539858.1\|3821703_3822510_+\|septum-site-determining-protein-MinD	unknown	unknown	gnl\|CDD\|131023
NZ_CP011456.1\|WP_053539867.1\|3832867_3834100_+\|methionine-gamma-lyase-family-protein	unknown	unknown	gnl\|CDD\|311036

Protein	Function_ID	Function_description	E-value
NZ_CP011456.1\|WP_053539863.1\|3828704_3829247_-\|DUF3172-domain-containing-protein	gnl\|CDD\|371494	pfam11371, DUF3172, Protein of unknown function (DUF3172). This family of proteins has no known function.	1.14976e-88
NZ_CP011456.1\|WP_027401799.1\|3835828_3836035_+\|type-II-toxin-antitoxin-system-HicB-family-antitoxin	gnl\|CDD\|224514	COG1598, COG1598, Predicted nuclease of the RNAse H fold, HicB family [General function prediction only].	1.54459e-06
NZ_CP011456.1\|WP_053539859.1\|3822913_3823954_-\|3-deoxy-7-phosphoheptulonate-synthase	gnl\|CDD\|237376	PRK13396, PRK13396, 3-deoxy-7-phosphoheptulonate synthase; Provisional.	0
NZ_CP011456.1\|WP_052149955.1\|3827091_3827766_+\|AMIN-domain-containing-protein	gnl\|CDD\|378705	pfam11741, AMIN, AMIN domain. This N-terminal domain of various bacterial protein families is crucial for the targetting of periplasmic or extracellular proteins to specific regions of the bacterial envelope. AMIN is derived from the N-terminal domain of AmiC, an N-acetylmuramoyl-l-alanine amidase of Escherichia coli which localizes to the septal ring during division and plays a key role in the separation of daughter cells. The AMIN domain is present in several protein families besides amidases suggesting that AMIN may represent a general targetting determinant involved in the localization of periplasmic protein complexes.	5.4527e-16
NZ_CP011456.1\|WP_081424384.1\|3820612_3821494_+\|septum-site-determining-protein-MinC	gnl\|CDD\|179052	PRK00513, minC, septum formation inhibitor; Reviewed.	3.28285e-89
NZ_CP011456.1\|WP_053539857.1\|3818676_3820005_+\|four-carbon-acid-sugar-kinase-family-protein	gnl\|CDD\|225930	COG3395, COG3395, Uncharacterized protein conserved in bacteria [Function unknown].	1.12582e-109
NZ_CP011456.1\|WP_053539856.1\|3814673_3816647_+\|SUMF1/EgtB/PvdO-family-nonheme-iron-enzyme	gnl\|CDD\|224182	COG1262, COG1262, Uncharacterized conserved protein [Function unknown].	6.02655e-82
NZ_CP011456.1\|WP_053539869.1\|3834574_3835774_-\|hypothetical-protein	gnl\|CDD\|223966	COG1035, FrhB, Coenzyme F420-reducing hydrogenase, beta subunit [Energy production and conversion].	1.2663e-96
NZ_CP011456.1\|WP_053539867.1\|3832867_3834100_+\|methionine-gamma-lyase-family-protein	gnl\|CDD\|311036	pfam06838, Met_gamma_lyase, Methionine gamma-lyase. This is a putative pyridoxal 5'-phosphate-dependent methionine gamma-lyase enzyme involved in methionine catabolism.	0
NZ_CP011456.1\|WP_053539864.1\|3829409_3830486_-\|fatty-acid-desaturase	gnl\|CDD\|215275	PLN02498, PLN02498, omega-3 fatty acid desaturase.	3.29705e-137
NZ_CP011456.1\|WP_027404040.1\|3822547_3822853_+\|cell-division-topological-specificity-factor-MinE	gnl\|CDD\|184441	PRK13988, PRK13988, cell division topological specificity factor MinE; Provisional.	1.33599e-37
NZ_CP011456.1\|WP_053539868.1\|3834142_3834520_+\|GxxExxY-protein	gnl\|CDD\|372581	pfam13366, PDDEXK_3, PD-(D/E)XK nuclease superfamily. Members of this family belong to the PD-(D/E)XK nuclease superfamily.	2.97674e-54
NZ_CP011456.1\|WP_053539854.1\|3811553_3812417_+\|hypothetical-protein	gnl\|CDD\|369035	pfam06682, SARAF, SOCE-associated regulatory factor of calcium homoeostasis. SARAF is as family of eukaryotic proteins embedded in the ER. SARAF is SOCE-associated regulatory factor, where SOCE is store operated calcium entry. ie a mechanism governing calcium homoeostasis in the cell and the mitochondria. SOCE involves the enabling of Ca2+ release-activated Ca2+ (CRAC) channels. SARAF is a single pass ER membrane protein whose systolic-facing domain is responsible for activity and whose luminary-facing domain carries out a regulatory function in conjunction with another membrane protein STIM, an ER single pass membrane protein that detects changes in ER Ca2+ levels through its EF-hand, conserved Ca2+ binding domain. STIM is the major target for SARAF regulation, and thus SARAF negatively regulates the SOCE entry of calcium into cells protecting them from overfilling.	3.1329e-05
NZ_CP011456.1\|WP_053539866.1\|3831965_3832781_-\|acyl-CoA-desaturase	gnl\|CDD\|224316	COG1398, OLE1, Fatty-acid desaturase [Lipid metabolism].	7.8094e-113
NZ_CP011456.1\|WP_053539862.1\|3827860_3828589_+\|hypothetical-protein	gnl\|CDD\|376437	pfam01027, Bax1-I, Inhibitor of apoptosis-promoting Bax1. Programmed cell-death involves a set of Bcl-2 family proteins, some of which inhibit apoptosis (Bcl-2 and Bcl-XL) and some of which promote it (Bax and Bak). Human Bax inhibitor, BI-1, is an evolutionarily conserved integral membrane protein containing multiple membrane-spanning segments predominantly localized to intracellular membranes. It has 6-7 membrane-spanning domains. The C termini of the mammalian BI-1 proteins are comprised of basic amino acids resembling some nuclear targeting sequences, but otherwise the predicted proteins lack motifs that suggest a function. As plant BI-1 appears to localize predominantly to the ER, we hypothesized that plant BI-1 could also regulate cell death triggered by ER stress. BI-1 appears to exert its effect through an interaction with calmodulin. The budding yeast member of this family has been found unexpectedly to encode a BH3 domain-containing protein (Ybh3p) that regulates the mitochondrial pathway of apoptosis in a phylogenetically conserved manner. Examination of the crystal structure of a bacterial member of this family shows that these proteins mediate a calcium leak across the membrane that is pH-dependent. Calcium homoeostasis balances passive calcium leak with active calcium uptake. The structure exists in a pore-closed and pore-open conformation, at pHs of 8 and 6 respectively, and the pore can be opened by intracrystalline transition; together these findings suggest that pH controls the conformational transition.	1.53809e-23
NZ_CP011456.1\|WP_053539865.1\|3830676_3831735_-\|fatty-acid-desaturase	gnl\|CDD\|215323	PLN02598, PLN02598, omega-6 fatty acid desaturase.	2.18735e-156
NZ_CP011456.1\|WP_053539855.1\|3812483_3813818_-\|S41-family-peptidase	gnl\|CDD\|223864	COG0793, Prc, Periplasmic protease [Cell envelope biogenesis, outer membrane].	2.37072e-135
NZ_CP011456.1\|WP_053539858.1\|3821703_3822510_+\|septum-site-determining-protein-MinD	gnl\|CDD\|131023	TIGR01968, Septum_site-determining_protein_MinD, septum site-determining protein MinD. This model describes the bacterial and chloroplast form of MinD, a multifunctional cell division protein that guides correct placement of the septum. The homologous archaeal MinD proteins, with many archaeal genomes having two or more forms, are described by a separate model. [Cellular processes, Cell division].	3.07387e-143

>NZ_CP011456.1|WP_053539860.1|3824274_3825609_-|hypothetical-protein
MTPKTATLEIPELMQFLRQQLHDLPDERKPGNNTKYQVEDAVMAAFSIFFTQSASFLEHQRLMKSNKGKDNAESLFSIKKIPCDNQIRNLLDPVPAATIFMTFQEVYEWLNKNGVLKKFVYLDEEILIALDGTEYFSSKKISCPHCNCRNHRNGTTTYFHGCVTPIVVSPNQKQVINLEPEFIKKQDGHQKQDCENAAVKRWLNKNHQNKYGYAATLLGDDLYSHQPICELALKQGYNFIFVCLEASHKTVYEWLDFLEKSGEVATVETKQWDGRKNLIYRYRYASRVPLKDEDSSLEVNWCEVTVINEKTQKIIYQNNWITNHKITENNVEKIVKAARSRWKVENEGNNVLKNHGYNLEHNFGHGENHLCELLLSLNLLAFLFHTVLDLVNYTYQKVRELLVTRTSFFNDMRSLLKFIWFKDWSDFFSFILREYVPFKKINSG
>NZ_CP011456.1|WP_053539859.1|3822913_3823954_-|3-deoxy-7-phosphoheptulonate-synthase
MIIVMKVGSPQEEINRITTELSGWGLTPEKIIGQHKVVIALVGETADLDPPRIQELSQWIEKVLRVEVPYKRASRQFRHGQASEVVVNTPQGDVVFGEHHPLVVVAGPCSVENEEMIVETALRVKAAGAKFLRGGAYKPRTSPYAFQGHGESALELLATARKVSGLGIITEVMDTEDLEKIGEVADVIQVGARNMQNFSMLKKVGAQPKPVLLKRGMAATIEDWLMAAEYILAAGNANVILCERGIRTFDRQYTRNTLDLSVVPVLRKLTHLPIMIDPSHGVGWSEFVPAMAMAAIAAGTDSLMIEVHPNPAKALSDGPQSLTPDLFDKLMSELAVIGQVMGRWSN
>NZ_CP011456.1|WP_027404040.1|3822547_3822853_+|cell-division-topological-specificity-factor-MinE
MILEILEKFFVRSPDNSRDDVKRRLQVVISHDRADLDPQTLEKMRREILEIVCRYVEIETDGLEFCLESSQRTTALIANLPIRRIKESLDETVLESSDILL
>NZ_CP011456.1|WP_053539858.1|3821703_3822510_+|septum-site-determining-protein-MinD
MTRIIVITSGKGGVGKTTVSANLGMALAKIGKQVALIDADFGLRNLDLLLGLENRIVYTAVEVLARECRLEQALVRDKRQPNLVLLPATQHRNKESVTPDQMKLLVNALAQKYQYVMIDCPAGIEMGFKNATAPAKEALIVTTPEISAVRDADRVVGLLEAQGVKKINLIVNRIRPAMVQANDMMSVEDVQELLAIPIIGIIPDDERVIVSTNRGEPLVLSDTSSLAATAFENIARRLEGETVEFLELDSSNNNIFSRLRKMLWSKIV
>NZ_CP011456.1|WP_081424384.1|3820612_3821494_+|septum-site-determining-protein-MinC
MAYLKGNSAAENPEFNIPNEGETGAILANLPNTDLELIEQKVDHNIQVQLKTEGERLLLILPTELQVPASEFNWGEIWQQMKQRLNAGDRLRKPNTFLHLVAKDRLLDNRQLQDLAETLNTYQIQLKSVATSRRQTAIAACTLGYSVEQIQLQTSLTSDIQLTPSALADALYLQMTVRSGVEIRHPGTVIILGDINPSGIVIADGDILIWGRLRGVAHAGAGGNRESLIMALQMEATQLRIADAVARSPEKTLTGFFPEVAHITPEGIRIVKADDFSRSQLSSRMQLITQNLI
>NZ_CP011456.1|WP_081424256.1|3819969_3820245_-|hypothetical-protein
MVIGKTLAPCLLPLASCLLPLAPCLLPLASCLLPLASCLLPLASCLLPLASCLLPLASCLLPLASCLLPLASCLLPLAPCLFPISYQSLIN
>NZ_CP011456.1|WP_053539857.1|3818676_3820005_+|four-carbon-acid-sugar-kinase-family-protein
MNNQPKIIVLDDDPTGSQTVHSCLLLMRWDVETLRLGLKDDAPIFFILTNTRSLTPEAAASVTREVCHNLKLALAAEKIADFLVVSRSDSTLRGHYPIETDVIAEELGPFDAHFLVPAFFEGGRITRDSIHYLIIDDVPTPVHETEFARDSVFGYNYSYLPKYVEEKTKGRIKEDNVTRFSLADIRASSLESLLQLENNQCAVVDGENQEDLNTFAVDVLTAASRGKRFLFRSAASILTALAALPPQPIAAENMAKYVRGGKPGVIIVGSHVKKTTQQLESLLKVEGTVGIEVNVGRLLENGVNESAKLLIEIIENVKVVHGAGKTPVVYTSRQELAFKDVKTRLDFGNTVSALLMDIVQGLPSDLGFLISKGGITSNDVLSTGLALTSARLLGQILAGCSMVITPSDHPLFPNLPVVLFPGNVGNTDALGLVYQRLIGNRE
>NZ_CP011456.1|WP_053539856.1|3814673_3816647_+|SUMF1/EgtB/PvdO-family-nonheme-iron-enzyme
MSLCINPSCSKPQNPDNLLFCETCGSGLLLQNRYRVVVRLGGGGFGDTFEINEVRTNKTKVLKVLTNNSQKAIEAFKQEAEVLSQLNHPSIPKVEPGAYFEHYSRNSKTPIHCFVMEKIEGENLHEYMKKNSLRPINQTTAIEWLKDLLIILEQVHNKNFFHRDIKPSNVMLRAGDTQLVLIDFGTVREVTNTVMIQQGGVTGFNSPGYTPSEQLTGNAVMQSDFFALGRTFVYLLTGKEPLDQEMYDSYHATLNWRNYAPQISKMLADLLDEMMQTLYKDRPQNTQEILQRIAKIEKALQPPPPKPQLQPQPIKYQPKPISQKQKNTTRRDFIQTVSLVVGGAVIAVVGQNLFSGNKNQTSTPKITTSPNTPNPTPEPTPKITTPPLQTFSFEVVTTDATGSITNRRNASAKYFTEDLGNGVLLEMVEIPGGTFMMGSPANEAERGSDENPQHQVTVPSFCMGKYELTQAQYQAIVGNNPAKFKGDNRPVENVSWDDAVAFCQKLSQRTGKKYRLPSEAEWEYACRAGTTTPFYFGESITPELVNCDGNYPYASAPEGQYRQQTTDVGTFPPNAFGLYDMHGNVWEWCQDDYQENYINAPTDGGASTVLSATSRLLRGGSWLNRAGDCRSAHRHGDLRDYRYGRCGFRVVSSFRTL
>NZ_CP011456.1|WP_053539855.1|3812483_3813818_-|S41-family-peptidase
MNQSAKRYSPLQAALIGGAIATTATISVFGQAWTRCVHAALQDSPKALVDQVWQLVNREYVDGKFNQQDWQAVRQSLLSKDYTSKDEAYVAIREALQKLGDPYTRFMNPKQYESLTNQTSGEVSGIGIRMQVNEKTKRLTVIEAIENSPALKAGLKSGDEILAIDGKSTLKMTVEDASKLIRGQIGTSVSLDLERPNNKFNVKLTRATIEVPTVRYTLKQESGRRVGYIRLQEFSSHAADQMRVAIRTLKAQKVDSYVLDLRGNPGGLLNASIEIARMWLDDGHIVKTVDRKGSSSQTKANQTAITKLPLAILVDGNSASASEILTGALKDNKRAVVVGSQTFGKALVQSVHELGDGSGLAVTIAHYYTPNGTDINHKGIAPDIKLDLTQTQERQLASNPNLIGTNSDPQYTRAIAVLSNGKLAQSVTNQNPQSISVNAKDLKF
>NZ_CP011456.1|WP_053539854.1|3811553_3812417_+|hypothetical-protein
MMISILRKFTIVCLALTLCLTTVACGGGNDANSSSKNVSQTATPTKLNDGQYEVQQGTYNDANGEYTLFLLNNNPPSFATEKLQMARLTDDEIKAGKKTYLKVENSQPILYMTEDFKLEYVHNVTETRNNPQTGQPETVIVRQQSSFWAPFAGALVGNVAGQAISSMLFRPQYYVPPVYQPGGIMNGYGGYGSNYDSAVSSYRSRYNEPPAAVRNRTAFRTTGNIRNSSSGTANRTSTGRASGSGFGGSTLRPSGNSSSTRRNSGSSFGSGGRSSSRRSSGFGSRRR
>NZ_CP011456.1|WP_052149955.1|3827091_3827766_+|AMIN-domain-containing-protein
MKTRTNQILLSIRVSLFGLIAFTPSISIAQPIAQLNNWEFHPKSQQLKISLSATATPQYFQLMQPPRIVLDLPNTKLGKVLTQKEYSGAIQRIRISQLNANITRIVLDLAPGTQLQTNQIQLQPLSRQKPTRWVLNPHITFSPANSLLTTPSTSLPPSTNLTTNSQQPLITVPPLNSQNPSPIINSPLPPAMLPTPEENKNSSPNNPKEIPIIEFGQPLPSQKF
>NZ_CP011456.1|WP_053539862.1|3827860_3828589_+|hypothetical-protein
MSNTSNFREAFREAKTHGLVGPNVIANALPYVGGGLVLTALGTYGGLGIIRTNPGLFFPTFIGAVILELILFFVAQNVASKGNKALALPLLGIYSLLSGYTLSGLVFVALRTQGVGIQGIGIAALSCGITFIAARKIGSNLSEADGMALTKTVSLGIVALLVVCLLQFAFALFGVYTPSWLEIGISGIGVFLFAGASVVDFYILPRTYRNDEYLPAALSMYLTYINLFVFILRLLIAINGRD
>NZ_CP011456.1|WP_053539863.1|3828704_3829247_-|DUF3172-domain-containing-protein
MRRKSANNRPTNPSKPSMFQSPMFNFVTIAIFGAVLILGIGIGIAFSSTTTLSSSNVASREFIDTRAPNPEICVQYGSSAMVMDARLFVTLNPFNVFVAQPNIRPGCVIRQNNWAILENKKLVTSDQVRECKNRLNTFGFTGDLNSEKPDIRCIYQNESAQNFFLSQPGAVGSPQDTERF
>NZ_CP011456.1|WP_053539864.1|3829409_3830486_-|fatty-acid-desaturase
MQLDTIQFNQDPSSQSGEGKEKLPFTLQDLKAAIPAECFQPSVTKSLYYFFRDVLIVGLLYAVANYLDSWYFWPIFWVMQGTMFWALFVVGHDCGHQSFSKHKWLNDLVGHITHTFILVPYHGWRISHRTHHKNTGSLENDESWYPVSESEYDEMPLAQRIGRFYLFLLAYPVYLFKRSPGKEGSHFSPSSPLFKPSEKWDIITSTTLWISMVAVLGLFTYQYGWMWLLKYYAGPYIVFIIWLDLVTFLHHTEPGIPWYRGEEWTFLKGAISSVDRDYGIFNHIHHDIGTHVAHHIFLNMPHYNLLKATEAIKPIMGEYFHESKEPVWKSLWNSAIGCHFVPDTGSKVYYTSKSQNAK
>NZ_CP011456.1|WP_053539865.1|3830676_3831735_-|fatty-acid-desaturase
MTTSIIKSQEITVSTDLGKDQIKLKHIIKSLPKECFQKNSRKAWTTVILSLSMAALGYYFIAISPWFLLPLAWIFTGTALTGFFVIGHDCGHRSFANRRWVNDLVGHFFMMFLIYPFHSWRIKHNHHHKHTNKLDEDNAWHPIRTEVFAGWSKNRQSAFELFMRQRLWWVGSIGHWAVVHFDWRNFQKKDQASVKLSVAVVVAFAAIVFPSLIITTGVWGFIKFWFIPWIVYHFWMSTFTIVHHTLPDVPFSTADKWNEALAQLFGTIHCDYPQWVEVLCHDINVHVPHHISTAIPSYNLRLAYSSIKENWGPYLHDEYKFSWNLMKEITNQCQLYKTDIGYTTFDAYRAAK
>NZ_CP011456.1|WP_053539866.1|3831965_3832781_-|acyl-CoA-desaturase
MTIATSKPHINWVNTLFFVALHVGALFALVPSNFSWQAVGVALLLYWVTGGLGITLGYHRLVTHRSFQTPKWLEYVLVIFGTLSCEGGPIEWVGTHRIHHLHSDTESDPHDSNQGFWWSHMGWMIHFAPAHDQVPRFTKDIIDDPVYQFLQKYFIFLQIALGLVLYFLGGWPMVVWGIFVRIIWVYHCTWLVNSATHKFGYRSYDSGDRSTNCWWVAILVFGEGWHNNHHAFQYSARHGLEWWEIDMTWMTIQLLQLLGLATNVKLAEKKA
>NZ_CP011456.1|WP_053539867.1|3832867_3834100_+|methionine-gamma-lyase-family-protein
MNSFEQLREAEQALLEIFSGIDAQVKHNLKRVLDAFRHHRVGAHHFAGVSGYGHDDLGRETLDKVFAQVMGAESAVVRVQFVSGTHAIACALYGVLRPGDEMLAVVGSPYDTLEEVIGLRGQGQGSLIDFGIKYRQLELTDQGKIDWQNLSTSITDNTKLVLIQRSCGYSWRPSLSIADIEKIVYIVKQQNPHTVCFVDNCYGEFIETQEPTHIGADLIAGSLIKNPGGTVVSAGGYIAGRADLVEAAACRLTAPGIGSEGGATFDQNRLLFQGLFLAPQMVGEAMKGTYLTGYVFDKLGYPVNPPPLAPRGDVIQAIKLGSAKKLIAFCKAIQQYSPIGSYLEPIPDDMPGYESQVVMAGGTFIEGSTLELSADGPLREPYVVYCQGGTHWTHVSIALQAAIEAVINIE
>NZ_CP011456.1|WP_053539868.1|3834142_3834520_+|GxxExxY-protein
MNENEMAKEVVDAAYKIHTRLGPGLLESVYQSVLEYELGKRGLAVKAEQPIPVVYEDVHLEIGFRADLIVENKVIIELKSVETVHPVHKKQLLTYLRLADKRLGLLINFGSFLIKDGISRIANNL
>NZ_CP011456.1|WP_053539869.1|3834574_3835774_-|hypothetical-protein
MTSIDSSKHKRAKALKPGSVRPAKELCSECGLCDTYYIHYVKEACAFITQRIDELETTTHNRPRNLENENELYFGVHQEMMSARKQQPIEGAQWTGIVSSIAIEMLNRGLVEGVVCVQNTKEDRFQPMPIIARTAEQILAAKVNKPTLSPNLSVLEEIEKSGMKRLLVIGVGCQIQALRAVEKKLGLEKLYVLGTPCVDNVTRAGLQKFLETTSRSPETVVSYEFMQDFRVHFKHEDGSEETVPFFGLKTNVLKDIFAPSCMSCFDYVNSLADIVVGYMGAPYQWQWIVVRNDTGKEMLELVKDQLHTQPVMSQGNRKPAVQQSIPAYDQAVTLPMWAAKLMGVVIDKIGPKGLEYARFSIDSHFARNYLYVKRNHGEKLEAHVPEFAKRIVEQYKLPE
>NZ_CP011456.1|WP_027401799.1|3835828_3836035_+|type-II-toxin-antitoxin-system-HicB-family-antitoxin
MNLKIEIEQEEDGRFIAEVIDFPGVLAYGNTRQEAVAKVQALALRVLADKLEHGEVKPDLFSVSFAAA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP011456_34

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011456_34

3931428-3931504

Orphan

Consensus_repeat	Method
ATTAATACTACTGGTAATAAACA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP011456_34

>merge|NZ_CP011456|34|3931428-3931504|CRISPRCasFinder
ATTAATACTACTGGTAATAAACAGCTAAGAGAAGCCCAAGCTGTATTGAATAGGATTAATACTACTGGTAATAAGCA

>NZ_CP011456|34|33|3931428-3931504|CRISPRCasFinder
ATTAATACTACTGGTAATAAACA	GCTAAGAGAAGCCCAAGCTGTATTGAATAGG
ATTAATACTACTGGTAATAAGCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011456.1\|WP_053539927.1\|3934336_3935095_+\|thioesterase	unknown	unknown	gnl\|CDD\|225749
NZ_CP011456.1\|WP_053539934.1\|3943836_3945030_-\|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|224172
NZ_CP011456.1\|WP_027404050.1\|3910027_3910297_-\|30S-ribosomal-protein-S15	unknown	unknown	gnl\|CDD\|180170
NZ_CP011456.1\|WP_053539929.1\|3936090_3936870_-\|transposase	unknown	unknown	gnl\|CDD\|379016
NZ_CP011456.1\|WP_027404055.1\|3941290_3942103_-\|carbon-nitrogen-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|143596
NZ_CP011456.1\|WP_053539917.1\|3910451_3910862_-\|YggT-family-protein	unknown	unknown	gnl\|CDD\|376765
NZ_CP011456.1\|WP_053539931.1\|3938257_3940468_-\|polysaccharide-biosynthesis-tyrosine-autokinase	unknown	unknown	gnl\|CDD\|349772
NZ_CP011456.1\|WP_053539921.1\|3916143_3917082_+\|NAD-dependent-epimerase/dehydratase-family-protein	unknown	unknown	gnl\|CDD\|187540
NZ_CP011456.1\|WP_053539928.1\|3935544_3935913_+\|2TM-domain-containing-protein	unknown	unknown	gnl\|CDD\|379083
NZ_CP011456.1\|WP_053539922.1\|3917888_3919541_+\|polyketide-synthase	unknown	unknown	gnl\|CDD\|238429
NZ_CP011456.1\|WP_053539923.1\|3919645_3923593_+\|acyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|187658
NZ_CP011456.1\|WP_053539919.1\|3911920_3913174_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053539930.1\|3936987_3938133_-\|SpoIID/LytB-domain-containing-protein	unknown	unknown	gnl\|CDD\|225259
NZ_CP011456.1\|WP_053539926.1\|3933339_3934065_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|274374
NZ_CP011456.1\|WP_053539920.1\|3914044_3914953_+\|IS982-family-transposase	unknown	unknown	gnl\|CDD\|372648
NZ_CP011456.1\|WP_053539933.1\|3943064_3943718_-\|HAD-family-hydrolase	unknown	unknown	gnl\|CDD\|274056
NZ_CP011456.1\|WP_081424261.1\|3915649_3915967_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP011456.1\|WP_053541323.1\|3932137_3933313_+\|FtsX-like-permease-family-protein	unknown	unknown	gnl\|CDD\|130253
NZ_CP011456.1\|WP_053539918.1\|3911316_3911793_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053539924.1\|3923592_3930105_+\|non-ribosomal-peptide-synthase	unknown	unknown	gnl\|CDD\|237108

Protein	Function_ID	Function_description	E-value
NZ_CP011456.1\|WP_053539931.1\|3938257_3940468_-\|polysaccharide-biosynthesis-tyrosine-autokinase	gnl\|CDD\|349772	cd05387, BY-kinase, bacterial tyrosine-kinase. Bacterial tyrosine (BY)-kinases catalyze the autophosphorylation on a C-terminal tyrosine cluster and also phosphorylate endogenous protein substrates by using ATP as phosphoryl donor. Besides their capacity to function as tyrosine kinase, most of these proteins are also involved in the production and transport of exopolysaccharides. BY-kinases are involved in a number of physiological processes ranging from stress resistance to pathogenicity.	4.65352e-43
NZ_CP011456.1\|WP_053539934.1\|3943836_3945030_-\|NAD(P)/FAD-dependent-oxidoreductase	gnl\|CDD\|224172	COG1252, Ndh, NADH dehydrogenase, FAD-containing subunit [Energy production and conversion].	4.05917e-132
NZ_CP011456.1\|WP_027404050.1\|3910027_3910297_-\|30S-ribosomal-protein-S15	gnl\|CDD\|180170	PRK05626, rpsO, 30S ribosomal protein S15; Reviewed.	1.00904e-45
NZ_CP011456.1\|WP_053539929.1\|3936090_3936870_-\|transposase	gnl\|CDD\|379016	pfam13005, zf-IS66, zinc-finger binding domain of transposase IS66. This is a zinc-finger region of the N-terminus of the insertion element IS66 transposase.	1.82999e-09
NZ_CP011456.1\|WP_053539917.1\|3910451_3910862_-\|YggT-family-protein	gnl\|CDD\|376765	pfam02325, YGGT, YGGT family. This family consists of a repeat found in conserved hypothetical integral membrane proteins. The function of this region and the proteins which possess it is unknown.	7.96924e-06
NZ_CP011456.1\|WP_053539926.1\|3933339_3934065_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|274374	TIGR02982, heterocyst_DevA, ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.	4.23022e-120
NZ_CP011456.1\|WP_053541323.1\|3932137_3933313_+\|FtsX-like-permease-family-protein	gnl\|CDD\|130253	TIGR01185, membrane_spanning_subunit, DevC protein. This model describes a predicted membrane subunit, DevC, of an ABC transporter known so far from two species of cyanobacteria. Some experimental data from mutational analysis suggest that this protein along with DevA and DevB encoded in the same operon may be involved in the transport/export of glycolipids. [Transport and binding proteins, Other].	2.23746e-154
NZ_CP011456.1\|WP_053539928.1\|3935544_3935913_+\|2TM-domain-containing-protein	gnl\|CDD\|379083	pfam13239, 2TM, 2TM domain. This short region contains two transmembrane alpha helices that are found associated with a wide range of other domains. This domain may be involved in cell lysis or peptidoglycan turnover.	9.56017e-18
NZ_CP011456.1\|WP_053539922.1\|3917888_3919541_+\|polyketide-synthase	gnl\|CDD\|238429	cd00833, PKS, polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.	0
NZ_CP011456.1\|WP_053539923.1\|3919645_3923593_+\|acyltransferase-domain-containing-protein	gnl\|CDD\|187658	cd08955, KR_2_FAS_SDR_x, beta-ketoacyl reductase (KR) domain of fatty acid synthase (FAS), subgroup 2, complex (x). Ketoreductase, a module of the multidomain polyketide synthase, has 2 subdomains, each corresponding to a short-chain dehydrogenases/reductase (SDR) family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerizes but is composed of 2 subdomains, each resembling an SDR monomer. In some instances, as in porcine FAS, an enoyl reductase (a Rossman fold NAD binding domain of the MDR family) module is inserted between the sub-domains. The active site resembles that of typical SDRs, except that the usual positions of the catalytic asparagine and tyrosine are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular polyketide synthases are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) fatty acid synthase. In some instances, such as porcine FAS , an enoyl reductase module is inserted between the sub-domains. Fatty acid synthesis occurs via the stepwise elongation of a chain (which is attached to acyl carrier protein, ACP) with 2-carbon units. Eukaryotic systems consists of large, multifunctional synthases (type I) while bacterial, type II systems, use single function proteins. Fungal fatty acid synthesis uses dodecamer of 6 alpha and 6 beta subunits. In mammalian type FAS cycles, ketoacyl synthase forms acetoacetyl-ACP which is reduced by the NADP-dependent beta-ketoacyl reductase (KR), forming beta-hydroxyacyl-ACP, which is in turn dehydrated by dehydratase to a beta-enoyl intermediate, which is reduced by NADP-dependent beta-enoyl reductase (ER). Polyketide syntheses also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes the KR domain of the Lyngbya majuscule Jam J, -K, and #L which are encoded on the jam gene cluster and are involved in the synthesis of the Jamaicamides (neurotoxins); Lyngbya majuscule Jam P belongs to a different KR_FAS_SDR_x subfamily. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	1.55563e-147
NZ_CP011456.1\|WP_053539930.1\|3936987_3938133_-\|SpoIID/LytB-domain-containing-protein	gnl\|CDD\|225259	COG2385, SpoIID, Sporulation protein and related proteins [Cell division and chromosome partitioning].	1.439e-121
NZ_CP011456.1\|WP_053539927.1\|3934336_3935095_+\|thioesterase	gnl\|CDD\|225749	COG3208, GrsT, Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism].	9.69245e-98
NZ_CP011456.1\|WP_053539920.1\|3914044_3914953_+\|IS982-family-transposase	gnl\|CDD\|372648	pfam13612, DDE_Tnp_1_3, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contains three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	2.24271e-91
NZ_CP011456.1\|WP_053539933.1\|3943064_3943718_-\|HAD-family-hydrolase	gnl\|CDD\|274056	TIGR02252, Rhythmically_expressed_gene_2_protein, REG-2-like, HAD superfamily (subfamily IA) hydrolase. This family of proteins includes uncharacterized sequences from eukaryotes, cyanobacteria and Leptospira as well as the DREG-2 protein from Drosophila melanogaster which has been identified as a rhythmically (diurnally) regulated gene. This family is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called 'capping domain', or the absence of such a domain. This family is a member of subfamily 1A in which the cap domain consists of a predicted alpha helical bundle found in between the first and second catalytic motifs. A distinctive feature of this family is a conserved tandem pair of tryptophan residues in the cap domain. The most divergent sequences included within the scope of this model are from plants and have "FW" at this position instead. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.	8.52962e-86
NZ_CP011456.1\|WP_081424261.1\|3915649_3915967_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	7.5834e-12
NZ_CP011456.1\|WP_053539921.1\|3916143_3917082_+\|NAD-dependent-epimerase/dehydratase-family-protein	gnl\|CDD\|187540	cd05229, SDR_a3, atypical (a) SDRs, subgroup 3. These atypical SDR family members of unknown function have a glycine-rich NAD(P)-binding motif consensus that is very similar to the extended SDRs, GXXGXXG. Generally, this group has poor conservation of the active site tetrad, However, individual sequences do contain matches to the YXXXK active site motif, and generally Tyr or Asn in place of the upstream Ser found in most SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	9.42715e-113
NZ_CP011456.1\|WP_027404055.1\|3941290_3942103_-\|carbon-nitrogen-hydrolase-family-protein	gnl\|CDD\|143596	cd07572, nit, Nit1, Nit 2, and related proteins, and the Nit1-like domain of NitFhit (class 10 nitrilases). This subgroup includes mammalian Nit1 and Nit2, the Nit1-like domain of the invertebrate NitFhit, and various uncharacterized bacterial and archaeal Nit-like proteins. Nit1 and Nit2 are candidate tumor suppressor proteins. In NitFhit, the Nit1-like domain is encoded as a fusion protein with the non-homologous tumor suppressor, fragile histidine triad (Fhit). Mammalian Nit1 and Fhit may affect distinct signal pathways, and both may participate in DNA damage-induced apoptosis. Nit1 is a negative regulator in T cells. Overexpression of Nit2 in HeLa cells leads to a suppression of cell growth through cell cycle arrest in G2. These Nit proteins and the Nit1-like domain of NitFhit belong to a larger nitrilase superfamily comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. This superfamily has been classified in the literature based on global and structure based sequence analysis into thirteen different enzyme classes (referred to as 1-13), this subgroup corresponds to class 10.	7.85137e-144
NZ_CP011456.1\|WP_053539924.1\|3923592_3930105_+\|non-ribosomal-peptide-synthase	gnl\|CDD\|237108	PRK12467, PRK12467, peptide synthase; Provisional.	0

>NZ_CP011456.1|WP_053539924.1|3923592_3930105_+|non-ribosomal-peptide-synthase
MVHTQIKKGKVIMDKITERLLQFSPENRALILKRLRNKIEDNANKSIPVVIRESNILPLSFSQEHQWFIEQFNPNSPLYNLPNIVRMKGHLNIDALEKSFTEIVNRHEVLRATFTLLDGQPVQMFSPPQSLTLPILDLSHLNEEDREYQFKQLASEDSRRSFNLSTGPLYRASLLQLSDEEHILLINFHHIVFDAWSSGVLVREFTALYNAFNNGQPSPLPKLPIQYIDFAQWQQQQLQGSLMEKQISYWKKKLAGDLPILELPADRSRPSVQTFHGAVYSLTLPKSLSELIVGISRQQEVTLFMAFLAAFKVLLHRYTGQEDIIVGSPTSGRNNPQTHDLIGFFVNTLALRTNFSKQQTFSELLAQVREVALSAFSHQDLPIGKVVEALQPERSSSHSPLFQVMFTYQNTPMPDLDFSGMTVTLEQNAGDTAKFDLSLDVFENVEGFVCVFEYNTDLYNVDRITRLAGHFQKLLEGIVANPEQKVSELPLLTNAEYQQIFTKWNFTEISYPQECIHQLFETQVEKTPDNKAIAYQEQYLTYQELNQRSNQLAHYLQKLKIGPDVLVGICLERSVDLVVATLGVLKAGGAYVPLDVNYPQDRLAYMIDDTQVPVLLTYKYLSDKLPHNNVNAIYLDTEWPLIAQENAENLHIEGTTSANLAYVIYTSGSTGNPKGTMVQHGSLVNAYRGWEQTYALRSATTCHLQMASFSFDVFTGDWTRALCSGAKLLLCPSDLLLNPEGLYNLIVQEKVDCAEFVPAVFRNLIKYLEKTQQSLDFMKVLAIGSDSWYVREYKHFLQFCGSQTRLINSYGLTETTIDSSYFEDSVDDLSLEEMVPIGRPFPNTNIYLLDRNQQPVPIGVPGEIYIGGAGIARGYLNQPKLTTARFITNFFNQKSSLCIYRTGDLARYRTDGNIEMMGRIDNQVKIRGFRIELGEIETVLCENEGIHQSVVIVRQDLSGDKRLVAYVVPTANITVSALDLRNFLKGKLPDYMIPAAFIILETLPLSPSGKINRRALPAPDWSSNDFKETYVAPRTAIEEVLVEIWQQALGINRIGIQDDFFNLGGHSLLAMQIISNVRESFEVQIPLQKLFQASTVVNFASVIAEHQGKQQEFSNYPDAIAIPEEWYEPFPLTDIQEAYWVGRNELFEMGNVSTHSYDELEFKNLDVENLHLAWQRLIKRHGMLRAIVLPDGQQKIWRDVPDYKIEVLDLSGKAPDEIESQIETIRQQMSHQIFKTHQWPLFELRATLLDQQVARLHLSTDALTFDAWSFILIIKELSQLLDDPKAFLPPINLSFRDYVLAEQSIKFTEDYQRSLAYWQTQIVTLPPAPELPLAKNPSSLNEPHFSRLHSTLEKETWTKLRTKATRYGLTPTGLLLTAFSEVLALWSKNPQFTLNLTFFNRLPLHPEVNDIVGEFTSLTLLALDYSVRDSFLDRARRTQEKLWNDLEHRHVSGIQVLRELNRRQGGVTRAKMPIVFTSALTLPIPDIESSPIALRPVYGITQTSQVWLDHQVWEESGTLIFNWDVVEEIFPEGLLQDMFTAYCELLHRLANEDAIWQEPTLYLLPPAQFQQQLQVNATEEKMCANLLHTLFTSQASLQPKEVAIVTPQNRLTYEEVYRQANRIGRRLRQLGARPNTLVAVVMQKGWEQVVAVLGILQSGAAYLPIDPEQPQERIWYLIEQGQVQLVLTQSWLNTFLEWPQDVQRLCVDNNDFINISDQPLNTVQGANDLAYVIFTSGSTGLPKGVMINHRGAVNTIVDINKRFQVTNKDRVFAISALNFDLSVYDIFGILAAGGTVVIPDASSRRDPSHWLPLMIQEKVSLWNSVPALMGMLTEYTQSQGKYLPESLRLVMMSGDWIPLSLPNEIKELSTDVKVISLGGATEASIWSILYPIEIVDTNWSSIPYGKPMANQKFYVLNDVLEPCPVWVSGHLYIGGVGLAMGYWRDEEKTHASFIVHPKTGLRLYRTGDLGRYLPDGNIEFLGRQDFQVKIQGYRIELGEIEKALVQHSKIQDGIVTTVGETKGNKKLVAYILHQNEDAFDERELRNFLREKLPEYMIPSLFTVLKEFPLTSNGKVDRKALANSTSINFQIEKHFVPPQTSIEKKLATIWSEMLQVDSVGIEDNFFELGGDSILSIRLILHIREVFQVELPLNKLFETPNIANLAGYIEGF
>NZ_CP011456.1|WP_053539923.1|3919645_3923593_+|acyltransferase-domain-containing-protein
MAIGNQAIPKNQQVVFVFSGMGPQWWAMGRQLLMAEPIFRQTIEECDTILQYYADWSLLTELTRDEEHSRIEETQIAQPTNFAIQVALAALWRSWGIEPSAIVGHSAGEPAAAYVAGALSLKDALKVVFHRSRLQQQTAGLGKMAAIGLSYEEAQQLLVGYEDRLSIAAINSPTSVTLSGNEADLETISKVLEDRKVFFRLLRVNVAYHSSTMNPLKEELLEVLQDIEPQTPIIPLWSTVTGQKVDRPELNEMYWWQNMRQPVFFAASMNKLAEAGYDLFLEISPHPVLAGSISECFISQNRKATVLTSIRRKEAERQIMLTSLAALYTQGCKVSWQSFYAYGQHVYLPLYTWQRERYWHESPASEQLRLGKQIHPLLGQALELPYPSWKLDLNKRYLAYLDDHRIQNAVVYPGAAYVEMGLAVAKRFFGEGIYSVDNIEFKKALFLPEKDLLTVQLTLDPKDASFSVYTRQTHSQNDWTLHAQAKLHLRQFVTKCINIHEIRNRCSKEVSKPDLYHKLGEVGFQYGPQFQRIEQIWLGATEALGQIHMPDLMEINSQDYELHPIILDSCFHVLIAIASLGDINQHNSSVYLPISIQSVRVYNRPRPNMWAHARVIEQGDKILTGEIQLFDEKGNLLAEVLGFQAQSIESAGKGLSQNLDSWLYELEWQPKPRVNDENTPQNSFKEQPGSWFIFADQGGVAQRLVTQLRERGENCIIVVPGESYQALEPGHYSINPSYPDEFQNLLQDAIDNSNLPCRGLIHLWSLDTVASETMTVDALESEQLLGCGTILHLIQALVQSGWRNHHKLWVVTRGTQPVADSEIVSLAPASLWGLSRVASYQEHTNIWGGIIDLDPVHSDDEISMLLAEVWNPDNEDQIAFRNQQRYCVRLVSTQKPTSVFPSQFRPDSSYLITGGLGDLGILVARWLVERGARHLILVGRDKFPSRQMWNQLEADSRLAVRISVVRELEAMGASVHLAAVDVANEAEVAEFLDTYQQENWPPIRGVIHSAGLVRDELLLNMELKNFNSVLRPKALGAWVLHRLFENVSLDFFVLFSSVASVVGTMGQGNYAAGNSFMDSLVHYRRSKGLPALSINWGPWGEVGMASRLDLTDYYAQRGIGIIRPKDGIEILSRLLNYDLPQVTVVPANWALVANMYPTGTTVRIISDLLAEAQEKSTTQGDTTVISEGHFIQQIFAVEASQQTSLLETHIQELISQVLRIDLSRLNLEQSLNALGLDSMMAIELKQRIEISVGASIAVVDLLKGSNIREIVTILMPQIQEYQKLASQEDIGKLLSDLEQLSPEEAERLFAEIQQQ
>NZ_CP011456.1|WP_053539922.1|3917888_3919541_+|polyketide-synthase
MVLSSNCNEVNLSDSNSDSSNSNPTTSYQIAIVGIGCRFPGGANSPEDFWRVLCDETDAITDVPSDRWDIRSFYDPDPTKPGKTSTYRGGFIENIYDFDAQFFGISPREAALLDPQQRLLLEVCWEAFEDAGIIPEYLAGSNTGVFMGGFTLDYKILQFSESNYHLMDSHTATGSMMTLLANRLSYMFDLRGPSIALDTACSSSLVAVHLACQSILNGECDLALAGGVNVMIKPNYTIAESKAGMLSPDGRSKAYDSLANGYVRGEGAGIVVLKPLSKAVEDGDPIYAVIRGTAVNQDGHSSGITVPRRESQEALLWEAYRRAGVLPAQVQYVEAHGTGTPVGDPLEANALGTVLSTERPDGQECYIASVKTNIGHTEAAAGVAGLIKASLVLKHHKIPAHLHFQKANPDIDFPSLKLKIPTSLVPFPETDGFAIAGVNSFGFGGTNAHAVLQEAPITQIGIPGEENLDPNWGYLLPLSARSPQALQDLARAYRKLLTDGVFTNNTSLHNFCYTASLRRTHHQYRLGVVGKSYTDMADLLAAFLQRFPII
>NZ_CP011456.1|WP_053539921.1|3916143_3917082_+|NAD-dependent-epimerase/dehydratase-family-protein
MLGKELHIVFGTGPLGTAVLKELHSQGKRVISVNRKGFADVPNGVEVVKGDATDANSVRSICQGAIAVYNCANPPYTEWVEKFPPIMNGIIDGIAGTETKIVFADNLYMYGSVSGKIVENLPYRATGSKGLIRAQMSMNLMESHKKGKVRATIGRASNFFGPGVLSSSMGERVFASALLDKPAEVLGNIDVPHTYTFINDFAKSLVILGEHEKALGEVWHIPNAETLTTRQFINLIFKEVGKTPKFSVAPKWFFKILATFDPMIRELEEVMYEFDEPFIVEHTKYEKAFGAKPTPHSKAITQTLSWYRQRLA
>NZ_CP011456.1|WP_081424261.1|3915649_3915967_+|helix-turn-helix-transcriptional-regulator
MLKKPLLVKKTEIGGLIREFRLLTGLTQEQFGAYLGVTYATINRWENGRSKPSPMAMDKIEQKLREVGEQGKVLRFFCSFYGKPGSKSLEAILCEHFIENTGIIV
>NZ_CP011456.1|WP_053539920.1|3914044_3914953_+|IS982-family-transposase
MELEQLFCAIDDFCLDFEAKLNSELISSQSQKRKRKSRLCLSEVMTIIVHFHQSSYRNFQDYYQKSILTNYHRYFPSLVSYNRFVELMPDALLPLICYLNSRKGQCSGISFIDSMGIPICHNKRAKRNKVFRGLSGWGKSSVDWYFGFKLHLIINEQGELLAFQVTPGNVDDRKPVPTLAQNLWGRLFGDKGYISKSLFQELLENDVKLITPFKKNMKNKLVELWEKLMLRKRALIETVNDQLWLRHAGYQNISQVVHSRHRSIYNFMVNIIAGLIAYTWQDKKPSLKLDKHEVTSLPALLI
>NZ_CP011456.1|WP_053539919.1|3911920_3913174_+|hypothetical-protein
MTPNPAIMRSVEQLGYRVTVGDVATQIGLNIAEVNQSLLALAADAGGHLQVAESGDVVYQFPRNFRDILRNKYLQIRLQEWWKKVWSVLFYLIRISFGILLVASILLITVTIIIIMTASSDRDDDNRSSSRSNNFFFFPDLFWYFSPNYGDTRQERRRERGEGSEMNFFEAVFSFLFGDGDPNASLEERRWEEIGAVISNNQGAVVAEQIAPYLDDVGEKYQQEYEDYMLPVLVRFNGMPQVSSDGQIVYYFPELQVRASKKQRRSISEYLHEFSWKFSAASSGQILLSASLGGVNFVGALILGNLLRNGTIAAQIGGLVAFVQGIYGLLLAYGTGFIAIPLIRYFWIKRRNDQISTRNLQRQERARLLAGADASLRKKIAFAREFATEKVIGKEDAVYSTDTDLLEQEFQNKQIGD
>NZ_CP011456.1|WP_053539918.1|3911316_3911793_-|hypothetical-protein
MVQYSLAQSPELILTVPGKDSAKARDKAMDQLMELMEAGELPTELEEGFGPQQLIEVKEPTTDTSSREDEITQAVQILSNLASLKLKVQESRTEALEIRQAIDVLFSDKSVTEEEITHLKEGFKVLKNFAQANLRYQEARGKAEQARQVLDQALKSPE
>NZ_CP011456.1|WP_053539917.1|3910451_3910862_-|YggT-family-protein
MNRNPHERSNSARRQELRSEEETFRLQQEEGRLESSKRRSIFAWIINSIYLLVGMLEILLMLRFFLRFSGANTQNTFAQFIYNLSDPFIAPFSTLLISPVAGGGANVFDINVLIAIIVYALLGWLALWLVKFLYGR
>NZ_CP011456.1|WP_027404050.1|3910027_3910297_-|30S-ribosomal-protein-S15
MALTQQRKQELISGYQVHETDTGSADVQIAMLTDRINRLSQHLQANKKDHSSRRGLLKMIGQRKRLLAYIQAGSQEKYKALITRLGIRG
>NZ_CP011456.1|WP_053541323.1|3932137_3933313_+|FtsX-like-permease-family-protein
MKGKNFSIALSQLKYEKVRLLVALSGIIFAVVMMFMQLGFSDALFDSSVLLHKSMQADVFLLHSKSSALVALKSFSKYYLYQLLEFPEVKSVSPIHLGYANWKNPWNNDNRSIFVLGIDPSNNVLDLPGIQENLTNITYPDGVLFDMSSRPEFGAVVTSFNAGETILSELQGSLLKVEKVVKVVGLFRLGASFAANGHLLTSNSNFVNILTNKSAASIEIGTIQLNPNANLKQSISEIRSRLPSDVLAFTKDEFINFEKDYWKRNTAVGFIFSLSTMMAFIVGSVIVYQVLYTDVSEHLPGYAILKAMGYTDISLLWIIIQESLILSILGYIPGFLIAMISYQQTKSATLLPIGMTVDRGITLLLVTILMCLISGLIAVRKLRDADPADIF
>NZ_CP011456.1|WP_053539926.1|3933339_3934065_+|ATP-binding-cassette-domain-containing-protein
MLLQEPVVSIKNLQHYLGKGSLRKRVLSDINFDIHRGEFIILTGPSGSGKTTLLTLIGALRTIQSGSLKVFEHELYQTSNYQLVKVRRKIGYIFQSNNLLPFLTAVQNVQTSIFLHKEISKAEAYDRAVDILESVGLGKHLNSFPRNLSGGQQQRVAIARSLAASPKLILADEPTAALDKKTGRDVIELMLSLTKQINCTILLITHDSRILDVAERIIYMEDGNLINTNVSLNESIITLNE
>NZ_CP011456.1|WP_053539927.1|3934336_3935095_+|thioesterase
MINSQETNKWIRHRKNNLQARMRIFCFPYAGGSALSFRTWADNLPHFIEVFPIEMPGRGVRLSEPPFHQISPLVEEISYAIHPYLDIPFAFFGHSLGALISFELARFVRKTYALNPVHLFVSGRGAPQVIEHNKIHHLSDAEFLEALRRFNGTPKKVLESAELMQLLLPTLRADLMINESYTYTVEPPLDCPITVFGGLQDPLVNRDDMEAWKEHTLSSFSLHLLPGDHFFINTAQYFLLQLINKTVTAGVK
>NZ_CP011456.1|WP_053539928.1|3935544_3935913_+|2TM-domain-containing-protein
MTYHSEEVQQILKIALTHKQEREFSREQLIEIASELDISTEALQSAEQEWSIQRAETQRQHMLNTRQRQEFKSHLTNFIAVNIFLVLLNLVISPLYFWAIFPLLGWGLSLFFHGWKVYRNRS
>NZ_CP011456.1|WP_053539929.1|3936090_3936870_-|transposase
MEKISLICHIYKTEIPETDWEQTPTSVKGRMEEMEQWIQELEEKLNRTSKNSSSPPSADPLNTQKKPVKKKSGKKRGGQLGHKGFAKFLYPESDCEEVINYKPESCSSCGGQLEGEDANPYRHQQVEIPPIKPIVIEHRLHQLECGECGKSTRAKLPEEVDPNHYGTRVVALVAVLSGLYRHSQRTVKTAMAEIFDIRLSLGTINKLRMEASNSVEKAVEEAKTYIQNAAVVGADETRFSQKNTDGYNSKNSQAWLWLS
>NZ_CP011456.1|WP_053539930.1|3936987_3938133_-|SpoIID/LytB-domain-containing-protein
MKFQLLLGNLFSEIKGRHWWIGILIWFVLLAPAQASVILRVAIEREVKQVKVGASTTAIVKDSSGKTLGELPGMSAFAAQAVPGGVALDRWQSGLFWIEPTKKGYVYIGDRWFRGRTLVVPTANGLTAVNWVDLEEYLYSVIGGEMDTSWPQEALKAQAIAARTYALYERERQRRNPLYDLGDSPDRWQIYKGVSSESPKTYSAADTTAGKVLTYNNQIILSVFHACSGGHTENVEDVWTSKEPYLRAVPDFDQNIKECNWVKTFTPGEISTRISGVGNVKDMIIETLSPFKSVKSLKIIGDKGTKILQGEEVRTALRIKSTRFIVNKDVNGGFVLQGLGFGHGLGMSQWGAYELAKRGANHLQILGYYYKGVALTPIQAK
>NZ_CP011456.1|WP_053539931.1|3938257_3940468_-|polysaccharide-biosynthesis-tyrosine-autokinase
MIVATNVITLKKLLTSSTHRVIDIKKIVPIALYHRWLILGISCAVMSVTSLIAVTTKPTYQSYMQILVSYNSDKSLPNSKIEKITEDLRKPQLSSIDYSSQVKLMLSSKLLQKTVNLLHADYPQMTIEDIYNNSKIDEVSSLGLTQLPVDTGVNQNFTQVFLLSFIDKDPLRTKRVLQALEKVYQDYNTDQKNQRINQALAFVNNHIPQLQKDVLKAEKKLEKFRQQNSLIDPVLQSQILLQSLADIQKQRQTTRAQLQDVQIRHNSLEQAIESSSQNNINMNDSPESSQNQALISEFKQTEQALTQARFLYTEKHPIIQQLKQKQQIISTLLQQQGQNKTITINSKSKLSKQIIPKVENDLTQLKMNALGLIAHDRDLAESEQEIRSLLNTYPSLITEYKRLVANIEIYRKTLQQLTQAQNSLGVKIAQEGFNWQILEEPALGIHIGNLRWLLIFGGILMGPILGLAAALIWEKFNNAIFYTQDLQNLTNIQLLGSVPRLGKRQNSWTNQLKSIVRDKSKNVDISHPGIIKNLPNHKTLDIIYQNIQMLNNSLPLKSLMLTSALPGEGKTTLALGLGSSAARMHQRVLIIDANLRSPSLHKTLGLTNDWGLSLLLVDDINTSFNTYIQPIHPAIDVLTAGPIPEDVVNLLSSERMQELMDLFELNYDLVLIDAPSVLDTVDGRIVASLCNGIVMVGRIGKVTPHKLMEATEILSKLNLIGIVGNEVYDSPQILTP
>NZ_CP011456.1|WP_027404055.1|3941290_3942103_-|carbon-nitrogen-hydrolase-family-protein
MKSYLAAAIQMTSVPDLQKNLAQAEELIDLAVRQGAELVGLPENFSFMGEEKDKLAQGNAIAQATETFLQKMAQRFQVTILGGGFPIPVDSSGKVYNTALLINANGQELARYQKVHLFDVNVPDGNTYQESSTVMAGLELPPVYASPELGKIGLSICYDVRFPELYRHLSNQGADILFVPAAFTAFTGKDHWQVLLQSRAIENTCYVIAPAQTGTNYDRRQTHGHAMIIDPWGVILADAGEKPGVAIAEIKPTRLEQVRRQMPSLQHRVF
>NZ_CP011456.1|WP_053539933.1|3943064_3943718_-|HAD-family-hydrolase
MKKPKVIFVDAVGTLFGIKGSVGEIYRQIAQEFGVEVSAQILDQNFVKSFKASPPPIFLDADIRDIPQREYDWWRIIALNTFEGAGVLQEFTDFTAFFTELYIHFGTPEPWYVYPDVTLALMNWRRLGVELGVLSNFDSRLYLVLQGLRLREYFSSVTISTQVRAAKPDPEIFKIALNKHKCSAEEAWHIGDSITDDYYGAKSAGIRGVWINRNPTV
>NZ_CP011456.1|WP_053539934.1|3943836_3945030_-|NAD(P)/FAD-dependent-oxidoreductase
MTQATTKICILGGGFGGLYTALRLSQLPWESTPKPEIILVDQSDRFVFSPLLYELLTRELQTWEIAPPYSELLQGTGIQFHQAAVSTIDINKQTVQLQDKSELNYDRLVLALGGETPLDLVPGAATHAYPFRTITDAYKLEERLRILEAAKPEKIRVAIVGAGYSGVELACKLADRIGEKGRFRLIELSDQILRTSPEFNREAAKKALDSKGVFIDLETKVAAIDQNSISLEYKNQVDTIPVDVVIWTVGTKVSPVVTALPLKQNQRGQITTTPQLQAIEHPEIFALGDLADCLDADGKQVPATAQVAFQQADYTAWNIWATITNRPLLPFRYQPLGEMMALGIDNATLTGLGVQLDGSFAYLARRLAYLYRLPTLNHQLKVGFNWLVSPIIEAISK

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Crispr_ID: NZ_CP011456_35

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011456_35

3991781-3991889

Orphan

Consensus_repeat	Method
GTAACAATAAAAATCTAGTTCCCTCCCCTTTATAAGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP011456_35

>merge|NZ_CP011456|35|3991781-3991889|CRISPRCasFinder
GTAACAATAAAAATCTAGTTCCCTCCCCTTTATAAGGTTTTATCAATTTCAGGATTAACCCAACAATCATCAGTAACAATAAAAATCTAGTTCCCTCCCCTTTATAAGG

>NZ_CP011456|35|34|3991781-3991889|CRISPRCasFinder
GTAACAATAAAAATCTAGTTCCCTCCCCTTTATAAGG	TTTTATCAATTTCAGGATTAACCCAACAATCATCA
GTAACAATAAAAATCTAGTTCCCTCCCCTTTATAAGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011456.1\|WP_053539965.1\|3994969_3995746_+\|phage-Gp37/Gp68-family-protein	unknown	unknown	gnl\|CDD\|377854
NZ_CP011456.1\|WP_053539968.1\|3996601_3996832_-\|DUF4926-domain-containing-protein	unknown	unknown	gnl\|CDD\|379816
NZ_CP011456.1\|WP_039200631.1\|3981977_3982820_-\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP011456.1\|WP_053539961.1\|3986921_3988421_-\|MBOAT-family-protein	unknown	unknown	gnl\|CDD\|224610
NZ_CP011456.1\|WP_039201305.1\|3985665_3986748_-\|photosystem-II-q(b)-protein	unknown	unknown	gnl\|CDD\|130221
NZ_CP011456.1\|WP_053541324.1\|3994541_3994721_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053539959.1\|3984482_3984797_-\|RNA-binding-protein	unknown	unknown	gnl\|CDD\|240845
NZ_CP011456.1\|WP_053539970.1\|3997162_3997393_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053539963.1\|3993084_3993627_+\|transposase	unknown	unknown	gnl\|CDD\|224854
NZ_CP011456.1\|WP_053539962.1\|3988546_3991570_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053539964.1\|3993909_3994182_-\|DUF4926-domain-containing-protein	unknown	unknown	gnl\|CDD\|379816
NZ_CP011456.1\|WP_053539967.1\|3996188_3996605_+\|type-II-toxin-antitoxin-system-VapC-family-toxin	unknown	unknown	gnl\|CDD\|350311
NZ_CP011456.1\|WP_053539956.1\|3979409_3980696_+\|glutamyl-tRNA-reductase	unknown	unknown	gnl\|CDD\|234592
NZ_CP011456.1\|WP_027404080.1\|3977980_3979018_+\|class-II-fructose-bisphosphatase	unknown	unknown	gnl\|CDD\|236536
NZ_CP011456.1\|WP_053539969.1\|3996828_3997170_-\|type-II-toxin-antitoxin-system-PemK/MazF-family-toxin	unknown	unknown	gnl\|CDD\|367091
NZ_CP011456.1\|WP_053539958.1\|3983141_3984056_-\|3'-5'-exonuclease	unknown	unknown	gnl\|CDD\|223426
NZ_CP011456.1\|WP_053539960.1\|3985166_3985613_+\|cyclase	unknown	unknown	gnl\|CDD\|226726
NZ_CP011456.1\|WP_027404079.1\|3977159_3977717_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_039202178.1\|3994174_3994552_-\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl\|CDD\|224937
NZ_CP011456.1\|WP_053539966.1\|3995946_3996192_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP011456.1\|WP_053539965.1\|3994969_3995746_+\|phage-Gp37/Gp68-family-protein	gnl\|CDD\|377854	pfam07505, DUF5131, Protein of unknown function (DUF5131). This is a family of bacterial and phage proteins of unknown function. There are three highly conserved cysteine residues in the disposition, Cx6Cxxc, amongst many highly conserved residues.	1.11818e-138
NZ_CP011456.1\|WP_039200631.1\|3981977_3982820_-\|tetratricopeptide-repeat-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	8.34532e-23
NZ_CP011456.1\|WP_053539961.1\|3986921_3988421_-\|MBOAT-family-protein	gnl\|CDD\|224610	COG1696, DltB, Predicted membrane protein involved in D-alanine export [Cell envelope biogenesis, outer membrane].	2.05979e-90
NZ_CP011456.1\|WP_039201305.1\|3985665_3986748_-\|photosystem-II-q(b)-protein	gnl\|CDD\|130221	TIGR01151, Photosystem_QB_protein, photosystem II, DI subunit (also called Q(B)). This model describes the Photosystem II, DI subunit (also called Q(B)) in bacterial and its equivalents in chloroplast of algae and higher plants. Photosystem II is many ways functionally equivalent to bacterial reaction center. At the core of Photosystem II are several light harvesting cofactors including plastoquinones, pheophytins, phyloquinones etc. These cofactors are intimately associated with the polypeptides, which principally including subunits DI, DII, Cyt.b, Cyt.f and iron-sulphur protein. Together they participate in the electron transfer reactions that lead to the net production of the reducting equivalents in the form of NADPH, which are used for reduction of CO2 to carbohydrates(C6H1206). Phosystem II operates during oxygenic photosynthesis and principal electron donor is H2O. Although no structural data is presently available, a huge body of literature exits that describes function using a variety of biochemical and biophysical techniques. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis].	0
NZ_CP011456.1\|WP_053539959.1\|3984482_3984797_-\|RNA-binding-protein	gnl\|CDD\|240845	cd12399, RRM_HP0827_like, RNA recognition motif in Helicobacter pylori HP0827 protein and similar proteins. This subfamily corresponds to the RRM of H. pylori HP0827, a putative ssDNA-binding protein 12rnp2 precursor, containing one RNA recognition motif (RRM), also termed RBD (RNA binding domain) or RNP (ribonucleoprotein domain). The ssDNA binding may be important in activation of HP0827. .	5.32467e-31
NZ_CP011456.1\|WP_039202178.1\|3994174_3994552_-\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl\|CDD\|224937	COG2026, RelE, Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning].	3.1382e-09
NZ_CP011456.1\|WP_053539963.1\|3993084_3993627_+\|transposase	gnl\|CDD\|224854	COG1943, COG1943, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	7.70343e-31
NZ_CP011456.1\|WP_053539964.1\|3993909_3994182_-\|DUF4926-domain-containing-protein	gnl\|CDD\|379816	pfam16277, DUF4926, Domain of unknown function (DUF4926). This family consists of uncharacterized proteins around 70 residues in length and is mainly found in various Caulobacter, Microcystis and Cyanothece species. The function of this family is unknown.	9.14404e-25
NZ_CP011456.1\|WP_053539968.1\|3996601_3996832_-\|DUF4926-domain-containing-protein	gnl\|CDD\|379816	pfam16277, DUF4926, Domain of unknown function (DUF4926). This family consists of uncharacterized proteins around 70 residues in length and is mainly found in various Caulobacter, Microcystis and Cyanothece species. The function of this family is unknown.	2.59377e-25
NZ_CP011456.1\|WP_053539956.1\|3979409_3980696_+\|glutamyl-tRNA-reductase	gnl\|CDD\|234592	PRK00045, hemA, glutamyl-tRNA reductase; Reviewed.	0
NZ_CP011456.1\|WP_027404080.1\|3977980_3979018_+\|class-II-fructose-bisphosphatase	gnl\|CDD\|236536	PRK09479, glpX, fructose 1,6-bisphosphatase II; Reviewed.	0
NZ_CP011456.1\|WP_053539958.1\|3983141_3984056_-\|3'-5'-exonuclease	gnl\|CDD\|223426	COG0349, Rnd, Ribonuclease D [Translation, ribosomal structure and biogenesis].	9.24382e-41
NZ_CP011456.1\|WP_053539960.1\|3985166_3985613_+\|cyclase	gnl\|CDD\|226726	COG4276, COG4276, Uncharacterized conserved protein [Function unknown].	4.03943e-57
NZ_CP011456.1\|WP_053539967.1\|3996188_3996605_+\|type-II-toxin-antitoxin-system-VapC-family-toxin	gnl\|CDD\|350311	cd18744, PIN_VapC4-5_FitB-like, uncharacterized subgroup of the PIN_VapC4-5_FitB-like subfamily of the PIN domain superfamily. The PIN_VapC4-5_FitB-like subfamily includes the Virulence associated protein C (VapC)-like PIN (PilT N terminus) domain of Mycobacterium tuberculosis VapC4 and VapC5 ribonuclease toxins of the VapBC toxin/antitoxin (TA) system, and Neisseria gonorrhoeae FitB toxin of the FitAB TA system. This subfamily belongs to the VapC-like family of the PIN domain nuclease superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	5.99732e-55
NZ_CP011456.1\|WP_053539969.1\|3996828_3997170_-\|type-II-toxin-antitoxin-system-PemK/MazF-family-toxin	gnl\|CDD\|367091	pfam02452, PemK_toxin, PemK-like, MazF-like toxin of type II toxin-antitoxin system. PemK is a growth inhibitor in E. coli known to bind to the promoter region of the Pem operon, auto-regulating synthesis. This family represents the toxin molecule of a typical bacterial toxin-antitoxin system pairing. The family includes a number of different toxins, such as MazF, Kid, PemK, ChpA, ChpB and ChpAK.	4.48293e-28

>NZ_CP011456.1|WP_053539962.1|3988546_3991570_-|hypothetical-protein
MKTVLLDDRQNSLVQWVSQATGINTFGVKVRLLGNDLHILCENAECPQRWQTLSELLQALQQTDVDTLTNDEQPSIYQVLIYGRKKGEHRPEWCHRVYLNQLERHLEQALLAQTETPISPGGSLIISNESLARQGDGDAIARYLSEHLSHLGIAIQVKIKPSAAKNNSQIVANRLWVFCQSSYSPDSSLLAETVAQKLRHLQLVGYQDAIIVAQVRGETEPDWRVRVDLTPPEVMLKEWARWGDVQAIARILTEELLGFEIALQTSLKESTLHIFCTPAFDPLETAPAPDKTTALQAIVPLLESIAPQAIISAAIYGQKTTDKQPTWIDWVSLPASEHPFLLTSALELARAGDQPAMIFLLERLLNPNLDWRLKTGGIRVLLVRKEDLLHIMCDAPVCPTRYQVSSKVTQFIRQLKISGITGVRVYGRRAGDKEPVWHHGADLEERSRLVPEATPEFAATSEYVNSLMIDENSEEILRPDLTNEKVKIFLKEASKNWVLNTNKLIRNLLLNSQIFTPSNQEIDENPDNQGIGSGMIWLALGLLLALQSDFMLGYVVAHTVKNSPKASNNIVSPLSSQAQASSLSPNNQKTSFSNQPGTTELLNNDPSAFNASGFINDNNAQSGNLPAGPLKEKATSTAILLAARSQIPTFNARQLDEQLALYKQRLSTKKRPPDVLIVGSSRALRGVDPVALSKALSSQNHSNIDIFNFGINGATAQVVDVLIRQVLEPQELPKIILWADGSRAFNNGREDITFNAIESSPGYKQILQKSPTKVKANEGNKNLKDPTEKVSNKPKTADTNIYQTTNDWLNQSVANLSASYKSRDQIKILLQKQLQYLPFSYQHSPVKSKVHITHDSEIDNNSSLQGVDFDGFLPLSIRYNPTTYYQKHPKVSGDYDNDYKSFQLAGKQDQAFHSMLEFTKNNNISLVFVNMPLTSDYLDPVRMKYEQQFQEYLLTFTNHPQFIYRDLSQLWTKANDYFSDPSHLNRYGAYEVSNKLAIDPMISWPTK
>NZ_CP011456.1|WP_053539961.1|3986921_3988421_-|MBOAT-family-protein
MKFISIFYGLFLLSVLGIYWTVNLANIRLWILLIASLLFYASLNIQYLPLLLTLTFINFHLGLEIGSNTSPGKHSQNWNLSNEEWQFAQADWNQRRLKVLWIGIGFNVFILLGFKYINHFLNLVFNQPTSSPESLIKLVAPLGISFFTFECIAYLIDIYRGAQAATKFIQFATYKLFFAKLISGPITRYHNLAIQFDTLRFPSIDRVAEGMWLIARGAVKKGILADNLGIFVDLCFGNLQRAGSTDLWLATFAYGLQLYLDFNGYVDIARGSALLFGLVLPENFDFPYFSTSIADFWRRWHITLGDWLRNYLYFPLGGSRRGLMRTCGNLLIVMLVAGIWHGSAWGFIIWGLLHGVALVVHRLTVLLSDRLTILNSFWQNPLGVIFAWLLTQIMVFTSWIWFRLPNLQDSALVIKNFWGHAGDQQFSEKIYVEALNISQYQLSYLLIGIALIMFIAYTFKRGMKLEFSWPIKIVFVPLCFYAVWLLAPEGSLPYIYFDF
>NZ_CP011456.1|WP_039201305.1|3985665_3986748_-|photosystem-II-q(b)-protein
MTTTLQQRESANVWDRFCGWITSTDNRLYIGWFGVLMIPTLLSAIACFVIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVVPSSNAIGLHFYPIWEAASLDEWLYNGGPYQLVVFHFLIGVFCYLGREWELSYRLGMRPWICLAFSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLVKETTENESQNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRQLHFLLAAWPVIGIWFTALGISTMAFNLNGFNFNQSIMDSQGRVIATWADVINRANLGMEVMHERNAHNFPLDLAAADVAPVALSAPAING
>NZ_CP011456.1|WP_053539960.1|3985166_3985613_+|cyclase
MLHFKHSSIINAPVEVVWKFHERPDIVQILTPPWQPVQIVRREGGLEAGAITEFRLFLGILPLTWLARHTDYEKYRLFTDEQISGPFESWVHRHEFTEENGKTKLTDNITYAMPGGDGIEFMSGWLVQAQLEAMFRYRHYVTKRECEK
>NZ_CP011456.1|WP_053539959.1|3984482_3984797_-|RNA-binding-protein
MSIYVGNLSYEVTQDGLSEIFKEYGTVKRVQLPTDRETGKVRGFGFVEMESEAEEEKAIEALDGAEWMGRDLKVNKAKPREERTPFGGGNRGGGNFGGGSRNRY
>NZ_CP011456.1|WP_053539958.1|3983141_3984056_-|3'-5'-exonuclease
MPYLITAGEIRSLITEHSKAKTLWIDTEVADYKTRNPRLSLIQVLDNPEDMTGNSVYLLDVLDKSDVIADFVERIMTNDAIEKVFHNAGYDVQYLGGKRAKNITCTLAMAKKIPIYLLPLPNYQLKTLATELCNFHDIDKQEQRSDWGKRPLTEAQLEYAYLDCIYLAQVHLRLLELEANFQVDPIKEDLNLLTARYREIEQQQKILKSEFEHLQERVKKAMLVQNIAETSHCKLTSYERKTFKTQFQELVNLVENQGVDLDFTITLTEDIRKNLGVNLEKLTVNVDTNTYWKVTPKNQEDQED
>NZ_CP011456.1|WP_039200631.1|3981977_3982820_-|tetratricopeptide-repeat-protein
MKWQLLTQKQRGVNRAFTIAMFTIFSGIICVSCSNNQDVLVTERGASTPNPQIGRASKAGEFYVQGQTQHLKGNSQAAIAAYSKSISLNPEYAPAFKGRGLVYFDTGNKEGAIADYNQALRLNPKDAEAYNNRANAFASIGDYRRALADYNQAISIAPKSAEVYNNRGNARANQGDKNGALEDYTQAIRIDQEYAVAYNNRGNAYAARGEQQKAISDYNEAVRINPNFGAVFNNRGNAYAAIGDKRGALKDLQRAAAIFDKQGNKDLYQQAMKNIEELGK
>NZ_CP011456.1|WP_053539956.1|3979409_3980696_+|glutamyl-tRNA-reductase
MNIAVVGLSHKTAPVEVREKLSIPEPQIERAIAQLLSYPHVDEVAILSTCNRLEIYIVSQETTQGIHEVTQFLSEHSKLPIMSLRHHLFMLLHVDAVTHILRVAGGLDSLVLGEGQILAQVKNTHKLGQQFNGIKTILNRLFKQALTAGKRVRTETSIGTGAVSISSAAVELAQMKVENLSTNRVSILGAGKMSRLLVQHLISKGATQISIVNRSRSRAEELAKLFPAQPIQIHLLPEMMSVIAASDMVFTSTSSTEPILDRVKLETVLEPSQKLMIFDISVPRNVDADVNDLGNVKAFNVDDLKAVVAQNYESRRQMAQEAEKILDEEVEAFDIWWRSLETVSTISSLRNKIETIREQELEKALSRLGSEFGEKHQEVIEALTRGIVNKILHDPMVQLRAQQDVEARRRCMQTLQMLFNLDAEEQFS
>NZ_CP011456.1|WP_027404080.1|3977980_3979018_+|class-II-fructose-bisphosphatase
MENTLGLEIIEVVEQAAIASSKWMGKGEKNIADQVAVEAMRERMNKIHMRGRIVIGEGERDEAPMLYIGEEVGICTRPDAANFCNVNELVEIDIAVDPCEGTNLVAYGQNGSMAVLAISEKGGLFAAPDFYMKKLAAPAAARGHVDINKSATENLKILSECLNRAVEELVVVVMDRPRHKELIQEIRTAGARVRLISDGDVSAAICCAFSGTNIHALMGIGAAPEGVISAAALRCLGGHFQGQLIYDPEVVQTGLIGESREGNLARLNEMGITDGDRVYNANELASGETVLFAGCGITPGTLMDGVRFFHGGARTQSLVISSQSKTARFVDTVHLWDEPKNIQLR
>NZ_CP011456.1|WP_027404079.1|3977159_3977717_-|hypothetical-protein
MAANLKQIAKYLDNLGWDYRIDEKEDRIITGVEAENIEDFLIVVQLDEEGKFFRLFAPQVLAEVKDHPHKDAILQTMLAISWETKMLQWEYDPSDGEIRAIIEFPLEDSMLTERQFNRCLSGLIQIVDTIALPRLQEVMETGEDPGNLDLGERLLLSIQEQAPGLLELLEKAMEARKKRGSFADD
>NZ_CP011456.1|WP_053539963.1|3993084_3993627_+|transposase
MEYRRAKVAGGTYFFTVVTEKRRKILCLPKNVSLLRYAFGYVIQKHPFIIDAVVILPDHVHCIWTLPENYHDFSTRWRLIKSYFSRKCETISPEEISVSRKKKKQRAIWQYRFWEHLIRDEIDFQYHVEYIHYNPVKHDLVTAPKDWEYSSFYRAVRQGMYDMMWGAGEEIIFDDDIGNE
>NZ_CP011456.1|WP_053539964.1|3993909_3994182_-|DUF4926-domain-containing-protein
MTKSMPQLLDVVALTVDLPEYNLLRGQVGTIVELLADGAAFEVEFSDSLRDSFASRNGQTYQSVSLRPEQIMVLHFEPKSPNLVPEMVTA
>NZ_CP011456.1|WP_039202178.1|3994174_3994552_-|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MQNNNEPLLIEIALTPRFQRDLRELAKRYRSIRSDVQPLIDQLQAGEIPGDRIAGIKYQVFKVRIKNSNIQKGKSGGYRVIYYLKNAQGIILTTIYSKSDLTDVSNEIIEQAIAQYEEGKTILDD
>NZ_CP011456.1|WP_053541324.1|3994541_3994721_-|hypothetical-protein
METYTLELIQKSIFQLEKNSSLEETPTEIVIEGIHQGIKEALSGQTIPLSQMWEGIDAE
>NZ_CP011456.1|WP_053539965.1|3994969_3995746_+|phage-Gp37/Gp68-family-protein
MSSINTGIEWTDKTWNPTTGCNKVSPGCVHCYAEAITKRFPNNFKNGFDLTLHPERLTEPLKWRTPSRIFVNSMSDLFHEEVPLDFIQKVFKVIHATPHHIYQILTKRPERLVELAPHLDFHKNIWLGVSVENQSYVSRIDLLRQVPANVRFLSCEPLLGSLNLDLTNIDWVIVGGESGQKHRPMNIEWAEDIRDQCQKAEVAFFFKQIGGRTSKAGGKLLDGRIWDEMPEAWQEHQKKWGQSPRKLALKKESLQLTA
>NZ_CP011456.1|WP_053539966.1|3995946_3996192_+|hypothetical-protein
MTNLLQQAYAVVSRLPEDEQNEIAQLIFQQLAQRQQLLHPKTIDFMQFAGIANAEETILLQNLEHEIAEQRLLDLKRQIEL
>NZ_CP011456.1|WP_053539967.1|3996188_3996605_+|type-II-toxin-antitoxin-system-VapC-family-toxin
MKKALLDTNILSYFLRGETQVVKKFREYQQFHSYLTFSVLTYYEIKSGLLYKDARNLLQQFEILANSSEILPLDIDTANVASIIYQDLRQRGLLITPLDLLTGASAIHHKCVLITANIKHFQNIPNLEYENWITPPLS
>NZ_CP011456.1|WP_053539968.1|3996601_3996832_-|DUF4926-domain-containing-protein
MTKNTPNLLDVVALTIDLPEYNLLRGQVGTIVELLADGAAFEVEFSDSLRDSFASRNGQTYESIGLRPEQIMVLHF
>NZ_CP011456.1|WP_053539969.1|3996828_3997170_-|type-II-toxin-antitoxin-system-PemK/MazF-family-toxin
MRRGEIWLYNADPTVGDEISKTRPCIIVNNDDIGTLRLKVIVPITGWNEVFAQVPWMIRIETTAENNLSKLSTADTFQIRSVSQQRLIKKVGIVAEEIMQEISNALAIVLNIK
>NZ_CP011456.1|WP_053539970.1|3997162_3997393_-|hypothetical-protein
MINPQILEAIKQMPNVERLEIIEFALKLMREEMQNPQKLSLTAAAEMMRSYYETESSLTEFVDTYNEDFYEYQDYA

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Crispr_ID: NZ_CP011456_36

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011456_36

4216621-4216731

Orphan

Consensus_repeat	Method
ATTCGGTGGTTAATTCGAGCGATCGCTGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP011456_36

>merge|NZ_CP011456|36|4216621-4216731|CRISPRCasFinder
ATTCGGTGGTTAATTCGAGCGATCGCTGTGGGAATTTGTCTGAATCAGAATTTCCAGGATTTCAGGATTTCCAGGATGAGGTATTCGGTGGTTAATTCGAGCGATCGCTGT

>NZ_CP011456|36|35|4216621-4216731|CRISPRCasFinder
ATTCGGTGGTTAATTCGAGCGATCGCTGT	GGGAATTTGTCTGAATCAGAATTTCCAGGATTTCAGGATTTCCAGGATGAGGT
ATTCGGTGGTTAATTCGAGCGATCGCTGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011456.1\|WP_053540122.1\|4214765_4215488_-\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|226983
NZ_CP011456.1\|WP_053540120.1\|4212536_4213115_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053540127.1\|4223845_4224223_+\|type-II-toxin-antitoxin-system-VapC-family-toxin	unknown	unknown	gnl\|CDD\|350305
NZ_CP011456.1\|WP_053540124.1\|4219597_4220341_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053540117.1\|4210449_4210674_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053540119.1\|4211896_4212475_+\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|99749
NZ_CP011456.1\|WP_053540116.1\|4209326_4210457_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|379114
NZ_CP011456.1\|WP_053540125.1\|4220493_4221015_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053540115.1\|4209090_4209315_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_015081312.1\|4223631_4223856_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053540126.1\|4222695_4223451_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226983
NZ_CP011456.1\|WP_053541339.1\|4228894_4229131_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053541337.1\|4215864_4216497_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226787
NZ_CP011456.1\|WP_053541338.1\|4224250_4224691_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053540121.1\|4214123_4214699_-\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|368559
NZ_CP011456.1\|WP_053540129.1\|4227055_4227727_-\|VWA-domain-containing-protein	unknown	unknown	gnl\|CDD\|238119
NZ_CP011456.1\|WP_053540123.1\|4216793_4218293_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|214795
NZ_CP011456.1\|WP_053540130.1\|4227930_4228818_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053541336.1\|4213510_4214026_+\|peptidylprolyl-isomerase	unknown	unknown	gnl\|CDD\|365914
NZ_CP011456.1\|WP_053540118.1\|4210733_4211654_-\|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|235737

Protein	Function_ID	Function_description	E-value
NZ_CP011456.1\|WP_053540127.1\|4223845_4224223_+\|type-II-toxin-antitoxin-system-VapC-family-toxin	gnl\|CDD\|350305	cd18738, PIN_VapC4-5_FitB-like, uncharacterized subgroup of the PIN_VapC4-5_FitB-like subfamily of the PIN domain superfamily. The PIN_VapC4-5_FitB-like subfamily includes the Virulence associated protein C (VapC)-like PIN (PilT N terminus) domain of Mycobacterium tuberculosis VapC4 and VapC5 ribonuclease toxins of the VapBC toxin/antitoxin (TA) system, and Neisseria gonorrhoeae FitB toxin of the FitAB TA system. This subfamily belongs to the VapC-like family of the PIN domain nuclease superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	3.50665e-28
NZ_CP011456.1\|WP_053541337.1\|4215864_4216497_+\|hypothetical-protein	gnl\|CDD\|226787	COG4337, COG4337, Uncharacterized protein conserved in bacteria [Function unknown].	6.68681e-86
NZ_CP011456.1\|WP_053540121.1\|4214123_4214699_-\|Uma2-family-endonuclease	gnl\|CDD\|368559	pfam05685, Uma2, Putative restriction endonuclease. This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. A small number of member proteins also contain pfam02861 domains that are involved in protein interactions. Solutions of several structures for members of this family show that it is likely to be acting as an endonuclease.	1.90057e-30
NZ_CP011456.1\|WP_053540123.1\|4216793_4218293_-\|hypothetical-protein	gnl\|CDD\|214795	smart00736, CADG, Dystroglycan-type cadherin-like domains. Cadherin-homologous domains present in metazoan dystroglycans and alpha/epsilon sarcoglycans, yeast Axl2p and in a very large protein from magnetotactic bacteria. Likely to bind calcium ions.	1.33921e-27
NZ_CP011456.1\|WP_053540119.1\|4211896_4212475_+\|Uma2-family-endonuclease	gnl\|CDD\|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	4.58318e-41
NZ_CP011456.1\|WP_053540116.1\|4209326_4210457_+\|AAA-family-ATPase	gnl\|CDD\|379114	pfam13304, AAA_21, AAA domain, putative AbiEii toxin, Type IV TA system. Several members are annotated as being of the abortive phage resistance system, in which case the family would be acting as the toxin for a type IV toxin-antitoxin resistance system.	1.62583e-23
NZ_CP011456.1\|WP_053540129.1\|4227055_4227727_-\|VWA-domain-containing-protein	gnl\|CDD\|238119	cd00198, vWFA, Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A domains.	1.40047e-05
NZ_CP011456.1\|WP_053541336.1\|4213510_4214026_+\|peptidylprolyl-isomerase	gnl\|CDD\|365914	pfam00160, Pro_isomerase, Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD. The peptidyl-prolyl cis-trans isomerases, also known as cyclophilins, share this domain of about 109 amino acids. Cyclophilins have been found in all organisms studied so far and catalyze peptidyl-prolyl isomerisation during which the peptide bond preceding proline (the peptidyl-prolyl bond) is stabilized in the cis conformation. Mammalian cyclophilin A (CypA) is a major cellular target for the immunosuppressive drug cyclosporin A (CsA). Other roles for cyclophilins may include chaperone and cell signalling function.	5.0907e-60
NZ_CP011456.1\|WP_053540118.1\|4210733_4211654_-\|SDR-family-NAD(P)-dependent-oxidoreductase	gnl\|CDD\|235737	PRK06197, PRK06197, short chain dehydrogenase; Provisional.	0
NZ_CP011456.1\|WP_053540122.1\|4214765_4215488_-\|Uma2-family-endonuclease	gnl\|CDD\|226983	COG4636, Uma2, Endonuclease, Uma2 family (restriction endonuclease fold) [General function prediction only].	1.09727e-21
NZ_CP011456.1\|WP_053540126.1\|4222695_4223451_-\|hypothetical-protein	gnl\|CDD\|226983	COG4636, Uma2, Endonuclease, Uma2 family (restriction endonuclease fold) [General function prediction only].	5.80626e-22

>NZ_CP011456.1|WP_053541337.1|4215864_4216497_+|hypothetical-protein
MHTNPFKQLQVSLSVTAATIALLVTAPLMAHGQVNSTTTKPTSSNSKTSVVNISITEAEVLAAQKAWGEALVSISTTYDEKGIAAARKLADNIIDQAYAYQSGLVLFKPTLTTGDQTFRTTHKGALSYFVGGDSSFPKDTGFALKGWRKVEIRNAGIFILGNTATTMGNVSITDKTGKVTTVDKTWQFIRGGDGKLRIIVHHSSLPYSPK
>NZ_CP011456.1|WP_053540122.1|4214765_4215488_-|Uma2-family-endonuclease
MMITQALELQTNTSEDIIFPPSDLYSDEPPVETELHLEQIMLLIKSLKWLWKERTDFYAVGNLSIYYSPHQKKSEDVRGPDFFVVLGTERKTRKSWVVWEENGKYPHVIVEILSPTTAKTDRETKKLLYQDTFRTPDYFWFDPYTLEFAGFNLISGKYQPLQPNEKGHLWSEELGLYLGIHEGLLRYFTSLGVLVPTPEESAEMETTRAAMEAEKAKISNEKSQRLAAKLRELNIDPDTI
>NZ_CP011456.1|WP_053540121.1|4214123_4214699_-|Uma2-family-endonuclease
MSIMTIKDVEQVQTAFSEAGLDYDVELTNGRISIVGPSDIVSSEISSRLIAFLFAWVNPRRLGRVFDSAGGFILPDSNLTAPDVSFVRAARLRQSPRYFGELVPDLVVQIKSQSDRIKPLVTKILNFVELGAVMGILIDPDEETVTVYRHQGEPTILNNGDILTLPELFPGWELAVSELWPPIFTEEEIEG
>NZ_CP011456.1|WP_053541336.1|4213510_4214026_+|peptidylprolyl-isomerase
MANPTATLETSLGTITLELFTDVMPITAGNFIKLAKSEFYDGLHFHRVINNFMVQFGCPYSKDPSSPRAGTGNSPDGCIQDEHPEDGKLSNEPGTLSMANTGRPNSGSCQFFINTVHNHYLDWFTPGQSKHPVFGRVTEGMDVLKAIETTPTGAGDRPTTPVKMIKVTIHE
>NZ_CP011456.1|WP_053540120.1|4212536_4213115_+|hypothetical-protein
MAKRKKSNLQWIKETLELSPDHHWEGPDDYKIFVAGRGAVRFNVPQNWVFEPQEKSFKFMDKKPPDDDCCLEVSYNHLPPNDWTLFPLKHTLKKIMEDDSRDVIERGEVITVKRQTARIMWCEIKFIDTQAEPREAFSRTCVGLGSNIQCLITFDYWADQAEQLIPIWDEVMRSLTLGLYIRDPRTGLAFPD
>NZ_CP011456.1|WP_053540119.1|4211896_4212475_+|Uma2-family-endonuclease
MIAIPQQPQKMTIEEYLAWELDQDIRYEYINGEVFAMTGGTIPHNDLALNLYRNLYPHLRPRGCRVNVSDVKVQVTPKSPYFYPDLIVSCHPDDLNARKFIQNPKLIVEVLSPGTSNKDRGEKFRYYLTMPSLQEYILIDSEKISVERYCRGEGRMWLYYPYTTGDIITLSSIEFEFPIEILYDGVGLEIET
>NZ_CP011456.1|WP_053540118.1|4210733_4211654_-|SDR-family-NAD(P)-dependent-oxidoreductase
MKNEKWNTENILSQKGRIVIVTGSSSGIGYETARVLANKQASVIIAVRNLDKGNKALAKIIQQNKDADVRVMELDLANLASVKNFAENFQKNYSRLDLLINNAGVMIPPYSKTKDGFELQFGTNHLGHFALTGQLLKLLISTQGSRIVNVSSGAHNFGKLDFDDLNWEKRNYAQWTAYGDSKLANLYFTYELDRKLKEQGINTLVTASHPGWTATELQRTAGDVMKYLNGIFAQDITMGALPTLRAAIEEGLKGTEYFGPNGFMEISGYPVKVESNQLSKDRAIAQKLWVVSEQLTGVKFELNKKA
>NZ_CP011456.1|WP_053540117.1|4210449_4210674_+|hypothetical-protein
MIEFIVIVESGADSRTATKLAERVLQEKFDWLDDDILQHCFQWSGLVCLSENYYRPESDRFARRRHRTASFTMA
>NZ_CP011456.1|WP_053540116.1|4209326_4210457_+|AAA-family-ATPase
MLEKLILHNFKSHKSTELNFDSSRLHGLVGKNSAGKTSVLQALHNLSKLVNSKLFITTFINENSPQFLTKIGEKYMSLTASGFWKDPNQDIWEISYSWKQDNSKRWIPKTSWKICENEDSFEKETYITYPHIFREYLPPIVYLKLVANNLAKPAYSDEVTPRVEFDGSGLAPTLDFLRDEAPDKFQLIEEKLTRIVPNVRKVGIKRAKVPVIRQRLIEVNGKPISYEETQEMTEQEIVLDMNTGERIPAHAISDGTMLTLGLLTVLMNPNQPNLVLLDDVEQGLHPQAQRELMTVFKEIIAENPNLQIIFSTHSPYIIDALAPSQVHILNNSKSGFTVSKRLDEYPDVEWAKETLTTGEFWDAEGEDCVVEGEVSD
>NZ_CP011456.1|WP_053540115.1|4209090_4209315_+|hypothetical-protein
MQTLNINQTITAWSSIAENVFVPHTEAEYEYLVNILDTLIDQVGEDETHPLASLMEVIGALIENYENEHIPELL
>NZ_CP011456.1|WP_053540123.1|4216793_4218293_-|hypothetical-protein
MKADNQVAYFPIYGTNKNEYPNAITTGLDGSIYVAGSTGGQLDGQNNNGGIDAFITKYTSDRTKPKVWTKLLGTSSDDSVNAITTGLDGSIYVAGSTGGQLDEQNNNGGIDAFITKYTIDGTKVWTKLLGTSSDDSVNAITTGLDGSIYVAGSTGGQLDEQPNIEGNASFVRNISNDEEVTNNEAPTANAIADQNAKQDNVFNFQLPTNTFTDIDADDVLTYSATLENGDALPSWLTFNSTTRTFSGTPTNDNVGNLNVKAIATDKAGTSANDIFAIAVEKIIDNQSTTVGTPGDDKLIATPGSQFDGQNNIVFTGAGKDEVDLSTVSVFPNSGNNIVDLGSGEDTIFVNKGDRAFGSDGNDTFNAKDGQGGNRISGGLGDDTFYLGSNDRALGGDGKDIFRVSLGGGNLISGGAGADQFWIVNAELPSSANTVLDFQLGTDVIGIQGAVSLGITTSTLKLNQVGADTAIVFNNQTLATLTGIQASSLSLTDSKQFVFA
>NZ_CP011456.1|WP_053540124.1|4219597_4220341_-|hypothetical-protein
MVNNIMTSDQISIEVNGKVDVFQLSAYGNEQDQDQTDQEGTVKVNGNELELQGSLWRKVKIDHKITPKTILEFEFQGIKEGEIHSIGFDNDNVVYDKNLLNDQTTDDTTFQIWGSQESIPKWNPITNGIDRYATNLGWHKYKILLEDHFNGRFSYLTFGNDQDVTNPTATAKFRGLKIYENPDTPEDPNPGLFEKQLSNTNIYAIKTYGSFIYIAGSTSKNLDGKINNGNNDAFISKYTLEGKLLRS
>NZ_CP011456.1|WP_053540125.1|4220493_4221015_-|hypothetical-protein
MNKIISSAIAVSAITVSTVFGLSLVNVNSSKAGQNPLAFFGKETRLRKTGTKFVTGKTTAPVHICKSVLKGSECKYSKTVKYTHELTSTGKVDLQMLSAESGFKSGSEYSETVEQTLKLEPNQGAKIYVAPTGNQTTWEYQEEKQKGQWVTIGKASVTIWSGVKINSMRCTRC
>NZ_CP011456.1|WP_053540126.1|4222695_4223451_-|hypothetical-protein
MMITQALELQPNILEDISEDIIFPPSDLYSDEPPVETELHLEQIMLLIKSLKWLWKERTDFYAVGNLSIYYSPHQKKSEDVRGPDFFVVLGTERKTRKSWVVWEENGKYPNLIVEILSPTTAKTDRETKKELYQDTFRTPEYFWFDPYSLEFAGFYLIHGKYQPVEPNEKGHLWSQELDLYLGIVQGLLRYFTPDGDLVPTPEESAEFEAQRAAIEAQRATIEAQRAAMFDEKAQRLAAKLRELNIDPDTI
>NZ_CP011456.1|WP_015081312.1|4223631_4223856_+|hypothetical-protein
MEVLQLTTIVDSSGHLHLDIPTQLDPGEVSIVLVINPVVPSKDQNLKYDFSDLVGRLNWQGDAVVMQRTLRDEW
>NZ_CP011456.1|WP_053540127.1|4223845_4224223_+|type-II-toxin-antitoxin-system-VapC-family-toxin
MNGNRYVLDTNAIIALLQGNTQLIQLLQNANWIGISIISQIEFLVFSGLTQSDLQLFQQFIQRVEIVGLAAGDPVLVDKIIEIRQQYRLKLPDAVIAAITIQNSASLVTADQEFAKINRLKVINW
>NZ_CP011456.1|WP_053541338.1|4224250_4224691_-|hypothetical-protein
MAIDKDLLSSFKFRSTIENFCQTVGWDLYSINDTRAIMRFSMDSGTTQTVFILKYDSTLEFSCPSSLKFDDTDDIPHSLSTWLLISNARYKFGFWCIEKIEDKQVFSIIHNAEMSLIDINYFCKIVDRLVQECDKFEQTIANIMNS
>NZ_CP011456.1|WP_053540129.1|4227055_4227727_-|VWA-domain-containing-protein
MADNQGVTYAVDLVMCIDGTGSMGHLIEEVKSTALKFYEKLEAKMKEKTKKIDQLRAKVIVFRDYWADSPEIAMQCSEFFDLRSQSPDFANFISRIEAEGGGDEPENGLEGLGLALKSDWQKGNFSKQRYVVVVYTDASAHSLEKGGKPSNYPNNIPKTFDELTDYWHEIPVSAKRLLLFAPDASPWTVMSSWENTIHYVSAAGNGLEELEKDQILDAIANSI
>NZ_CP011456.1|WP_053540130.1|4227930_4228818_+|hypothetical-protein
MNVTELLQFVDQVVQKQTGEHLDDLEKAILKGLWQGQTYNQIADESGYNSQNYIGDVSRKLFKTLSEQLGEDINKYNFCWTLERVINSPQFVGLINTKINWCPNYPKPDKNQSHEEKSTSQLFYHDLTIAPKITHFYGRETELQTLSHWLINQNTRLISILGLPGIEKSWSTLINLYEGNPAYLQDISSLIRNIFQGKISDFLSEGLLLTENMKYQLSELFNRLSTVEQQIVLEMSKSNQPVNREQLRESLSLSSMELINGLQSLKRRYLVTTIESDKTLFILSPVFREYVIITP
>NZ_CP011456.1|WP_053541339.1|4228894_4229131_+|hypothetical-protein
MTTTLVKPSQLLPEGICIKHINNLMLFKFTDKLGERMQELLDKNKLDTLTPEEAIELEAIGELDDIFSYINAAVAAQD

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP011456_37

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011456_37

4446742-4446846

Orphan

Consensus_repeat	Method
AAATGTTGGGTTTCCTTGCGTCAACCCAACCTACACAAAG	CRISPRCasFinder

1 spacers

PD-DExK

The CRISPR arrays of NZ_CP011456_37

>merge|NZ_CP011456|37|4446742-4446846|CRISPRCasFinder
AAATGTTGGGTTTCCTTGCGTCAACCCAACCTACACAAAGCTTAAAACGTGATCATTACGTATTGAAATGTTGGGTTTCCTTGGGTCAACCCAACCTACACAAAG

>NZ_CP011456|37|36|4446742-4446846|CRISPRCasFinder
AAATGTTGGGTTTCCTTGCGTCAACCCAACCTACACAAAG	CTTAAAACGTGATCATTACGTATTG
AAATGTTGGGTTTCCTTGGGTCAACCCAACCTACACAAAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011456.1\|WP_053540302.1\|4444030_4444780_+\|isoprenyl-transferase	unknown	unknown	gnl\|CDD\|184841
NZ_CP011456.1\|WP_053540300.1\|4441567_4442980_+\|diaminopimelate-decarboxylase	unknown	unknown	gnl\|CDD\|273415
NZ_CP011456.1\|WP_081424276.1\|4452228_4452513_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|189968
NZ_CP011456.1\|WP_053540298.1\|4440378_4440750_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053540303.1\|4444834_4445101_-\|DUF3143-domain-containing-protein	unknown	unknown	gnl\|CDD\|371479
NZ_CP011456.1\|WP_053540299.1\|4440915_4441437_-\|ribosomal-protein-S18-alanine-N-acetyltransferase	unknown	unknown	gnl\|CDD\|273701
NZ_CP011456.1\|WP_053540305.1\|4448394_4449363_-\|protein-translocase-subunit-SecF	unknown	unknown	gnl\|CDD\|237275
NZ_CP011456.1\|WP_039204864.1\|4451208_4452192_-\|alpha-ketoacid-dehydrogenase-subunit-beta	unknown	unknown	gnl\|CDD\|177066
NZ_CP011456.1\|WP_053540307.1\|4452586_4452769_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_081424274.1\|4445151_4445715_-\|J-domain-containing-protein	unknown	unknown	gnl\|CDD\|365959
NZ_CP011456.1\|WP_053540308.1\|4452882_4453416_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_039204855.1\|4446156_4446630_+\|DUF29-domain-containing-protein	unknown	unknown	gnl\|CDD\|366774
NZ_CP011456.1\|WP_053540297.1\|4439772_4440219_+\|anti-sigma-regulatory-factor	unknown	unknown	gnl\|CDD\|225083
NZ_CP011456.1\|WP_081424275.1\|4445728_4445968_+\|type-II-toxin-antitoxin-system-Phd/YefM-family-antitoxin	unknown	unknown	gnl\|CDD\|376852
NZ_CP011456.1\|WP_053540306.1\|4449359_4450772_-\|protein-translocase-subunit-SecD	unknown	unknown	gnl\|CDD\|273456
NZ_CP011456.1\|WP_053540310.1\|4454794_4455142_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053540301.1\|4443080_4444034_+\|TIGR00159-family-protein	unknown	unknown	gnl\|CDD\|224539
NZ_CP011456.1\|WP_053540309.1\|4453412_4454543_-\|extracellular-solute-binding-protein	unknown	unknown	gnl\|CDD\|270379
NZ_CP011456.1\|WP_039204858.1\|4447032_4447632_-\|hypothetical-protein	PD-DExK	mkCas0061_PD-DExK_CAS-I:CAS-III	unknown
NZ_CP011456.1\|WP_053540304.1\|4447694_4448102_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP011456.1\|WP_053540302.1\|4444030_4444780_+\|isoprenyl-transferase	gnl\|CDD\|184841	PRK14831, PRK14831, undecaprenyl pyrophosphate synthase; Provisional.	0
NZ_CP011456.1\|WP_053540300.1\|4441567_4442980_+\|diaminopimelate-decarboxylase	gnl\|CDD\|273415	TIGR01048, Diaminopimelate_decarboxylase, diaminopimelate decarboxylase. This family consists of diaminopimelate decarboxylase, an enzyme which catalyzes the conversion of diaminopimelic acid into lysine during the last step of lysine biosynthesis. [Amino acid biosynthesis, Aspartate family].	0
NZ_CP011456.1\|WP_081424276.1\|4452228_4452513_+\|hypothetical-protein	gnl\|CDD\|189968	pfam01391, Collagen, Collagen triple helix repeat (20 copies). Members of this family belong to the collagen superfamily. Collagens are generally extracellular structural proteins involved in formation of connective tissue structure. The alignment contains 20 copies of the G-X-Y repeat that forms a triple helix. The first position of the repeat is glycine, the second and third positions can be any residue but are frequently proline and hydroxy-proline. Collagens are post translationally modified by proline hydroxylase to form the hydroxy-proline residues. Defective hydroxylation is the cause of scurvy. Some members of the collagen superfamily are not involved in connective tissue structure but share the same triple helical structure. The family includes bacterial collagen-like triple-helix repeat proteins.	3.65847e-05
NZ_CP011456.1\|WP_053540303.1\|4444834_4445101_-\|DUF3143-domain-containing-protein	gnl\|CDD\|371479	pfam11341, DUF3143, Protein of unknown function (DUF3143). This family of proteins has no known function.	2.11983e-37
NZ_CP011456.1\|WP_053540299.1\|4440915_4441437_-\|ribosomal-protein-S18-alanine-N-acetyltransferase	gnl\|CDD\|273701	TIGR01575, rimI, ribosomal-protein-alanine acetyltransferase. Members of this model belong to the GCN5-related N-acetyltransferase (GNAT) superfamily. This model covers prokarotes and the archaea. The seed contains a characterized accession for Gram negative E. coli. An untraceable characterized accession (PIR\|S66013) for Gram positive B. subtilis scores well (205.0) in the full alignment. Characterized members are lacking in the archaea. Noise cutoff (72.4) was set to exclude M. loti paralog of rimI. Trusted cutoff (80.0) was set at next highest scoring member in the mini-database. [Protein synthesis, Ribosomal proteins: synthesis and modification].	1.64661e-35
NZ_CP011456.1\|WP_053540305.1\|4448394_4449363_-\|protein-translocase-subunit-SecF	gnl\|CDD\|237275	PRK13022, secF, protein translocase subunit SecF.	1.09949e-116
NZ_CP011456.1\|WP_039204864.1\|4451208_4452192_-\|alpha-ketoacid-dehydrogenase-subunit-beta	gnl\|CDD\|177066	CHL00144, odpB, pyruvate dehydrogenase E1 component beta subunit; Validated.	0
NZ_CP011456.1\|WP_081424274.1\|4445151_4445715_-\|J-domain-containing-protein	gnl\|CDD\|365959	pfam00226, DnaJ, DnaJ domain. DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.	8.64601e-22
NZ_CP011456.1\|WP_039204855.1\|4446156_4446630_+\|DUF29-domain-containing-protein	gnl\|CDD\|366774	pfam01724, DUF29, Domain of unknown function DUF29. This family consists of various hypothetical proteins from cyanobacteria, none of which are functionally described. The aligned region is approximately 120-140 amino acids long corresponding to almost the entire length of the proteins in the family. Structure 3fcn is a small protein that has a novel all-alpha fold. The N-terminal helical hairpin is likely to function as a dimerization module. This protein is a member of PFam family PF01724. The function of this protein is unknown. One protein sequence contains a fusion of this protein and a DnaB domain, suggesting a possible role in DNA helicase activity (hypothetical). Dali hits have low Z and high rmsd, suggesting probably only topological similarities (not functional relevance) (details derived from TOPSAN). The family has several highly conserved sequence motifs, including YD/ExD, DxxNVxEEIE, and CPY/F/W, as well as conserved tryptophans.	3.79636e-39
NZ_CP011456.1\|WP_053540297.1\|4439772_4440219_+\|anti-sigma-regulatory-factor	gnl\|CDD\|225083	COG2172, RsbW, Anti-sigma regulatory factor (Ser/Thr protein kinase) [Signal transduction mechanisms].	2.30601e-34
NZ_CP011456.1\|WP_081424275.1\|4445728_4445968_+\|type-II-toxin-antitoxin-system-Phd/YefM-family-antitoxin	gnl\|CDD\|376852	pfam02604, PhdYeFM_antitox, Antitoxin Phd_YefM, type II toxin-antitoxin system. Members of this family act as antitoxins in type II toxin-antitoxin systems. When bound to their toxin partners, they can bind DNA via the N-terminus and repress the expression of operons containing genes encoding the toxin and the antitoxin. This domain complexes with Txe toxins containing pfam06769, Fic/DOC toxins containing pfam02661 and YafO toxins containing pfam13957.	1.07097e-06
NZ_CP011456.1\|WP_053540306.1\|4449359_4450772_-\|protein-translocase-subunit-SecD	gnl\|CDD\|273456	TIGR01129, Protein_translocase_subunit_SecD, protein-export membrane protein SecD. Members of this family are highly variable in length immediately after the well-conserved motif LGLGLXGG at the amino-terminal end of this model. Archaeal homologs are not included in the seed and score between the trusted and noise cutoffs. SecD from Mycobacterium tuberculosis has a long Pro-rich insert. [Protein fate, Protein and peptide secretion and trafficking].	3.6055e-143
NZ_CP011456.1\|WP_053540301.1\|4443080_4444034_+\|TIGR00159-family-protein	gnl\|CDD\|224539	COG1624, COG1624, Uncharacterized conserved protein [Function unknown].	1.14638e-80
NZ_CP011456.1\|WP_053540309.1\|4453412_4454543_-\|extracellular-solute-binding-protein	gnl\|CDD\|270379	cd13661, PBP2_PotD_PotF_like_1, The periplasmic substrate-binding component of an uncharacterized active transport system closely related to spermidine and putrescine transporters; contains the type 2 periplasmic binding fold. This group represents the periplasmic binding domain that serves as a primary polyamine receptor of an uncharacterized ABC-type transport system from plants and plant-symbiotic cyanobacteria. Polyamine transport plays an essential role in the regulation of intracellular polyamine levels which are known to be elevated in rapidly proliferating cells and tumors. Natural polyamines are putrescine, spermindine, and spermine. They are polycations that play multiple roles in cell growth, survival and proliferation, as well as plant stress and disease resistance. They can interact with negatively charged molecules, such as nucleic acids, to modulate their functions. Members of this family belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	7.95746e-114

>NZ_CP011456.1|WP_039204855.1|4446156_4446630_+|DUF29-domain-containing-protein
MQTLSTNNLKKLYKSDYLAWYEMTLEQIKNDQLNDLDLDSLSEVLENLVRDTKRSGESYLRQIIIHLLLIEYWEAESINRRRWAAEIVNFRNELETDMTRNLRKHLNEEKENNYQKAIKYVIAKTGLKKNTFPEQCPYTLEQLINDDWFSDTINIQF
>NZ_CP011456.1|WP_081424275.1|4445728_4445968_+|type-II-toxin-antitoxin-system-Phd/YefM-family-antitoxin
MQTRINLQNIQTLTDFKRNAKDYVEKIKSTKSPLVLTVNGKAEVVVQEAQEFQQMLDRLQNLEEELQKLKLAPQSTVSR
>NZ_CP011456.1|WP_081424274.1|4445151_4445715_-|J-domain-containing-protein
MLNNTHYKIFCSYFCYSYPRDLEYKKTYLSKVTQKNVNHHGEVPQSSNTTYYSLLGLHPGASVIDIRRAYRELSKLYHPDTTELPANIATAQFQQINTAYATLSNPERRLNYDLKIGYSRFGVIQVPPDLNHSVHKPYDFSKSMYLDASDRPLSAGEIFVLFILGLTIVGCMLLALAIAILRGEAIS
>NZ_CP011456.1|WP_053540303.1|4444834_4445101_-|DUF3143-domain-containing-protein
MLAADTPLYSHSLPQIEQWLKNQGCQQDDTQLHCWRVQRSSWEAELWLDTEQITVRYFQSGENRQDIQRSFKYSLSREDIEEAVFSGP
>NZ_CP011456.1|WP_053540302.1|4444030_4444780_+|isoprenyl-transferase
MKTQQTELQYLPLDLKQQLLPQHVAVIMDGNGRWAKSRGLPRIMGHKAGVDALKDLLRCCKDWGIKALTAYAFSTENWQRPEEEVEFLMNLFQRVLRQELREMVEENVQIQFVGNLSALPQALQAEISHSMDQTKDNQSIRFTIATNYGGRQEILQACRAIAQKVKEDLLQPDDISEEVFEAHLYTAGIADPDLLIRTSGEMRLSNFLLWQMAYSEIYISDILWPDFNRHEFHRALSAYQQRERRFGKV
>NZ_CP011456.1|WP_053540301.1|4443080_4444034_+|TIGR00159-family-protein
MRDWWKQWLINLGDWSQSLLLGTLDMVLVLALTYMILVIISERRTLWMVRGFIVLMLCSALSGKLGLPLLNFVLEKLVIGCAVAMAVALQSEFRRFLEQLGRGEFWQLFQNNARAIPKSDSVIDEIVDAIKELSKNRIGALLILETTGPIEEQDFSVPGVKLNAEVSKELIQTIFQPKTLLHDGATLIRGSRIVSSGIILPLSGRTASRQLGTRHRAAMGITERVENCICVVVSEETGSISLAEKGTLYRPLTIKKLKESLETRFSPTVDREAHAPGLLSLVRQLGDQSLKLMSRLLGLPCLRHATRRGTTASQDKK
>NZ_CP011456.1|WP_053540300.1|4441567_4442980_+|diaminopimelate-decarboxylase
MVSTYPVEVQLSGRQYLQSTSGDSADISPNQQLLPLTARVNDHDHLEIGGCDVTTLVEQFASPLYILDEETLRTACKQYRDTFKEYYKGESQVLYASKAWNCLAVCAIVASEGLGIDVVSGGELYTALNAGMSPDKIYLHGNNKSHDELVLAIQSGCTIVADNWHELDMLVKIAGEKTENSFLSPIRIMLRLTPGIECHTHEYIRTGHLDSKFGFDPHDLQEVFTFVSQQPSLNCVGLHAHIGSQIFERQPHRDLAAVMVQWLRDAAKHGLQVTELNVGGGLGIKYTESDDPPSIAEWSKAICEVVQAACTSENLPLPKLLCEPGRSLIATSCVTAYTVGATKVVPEIRTYVAIDGGMSDNPRPITYQSVYRVVVANKISDPCTEIVTLAGKHCESGDILIKNAQLPKTEANDILVVMGTGAYNYSMASNYNRLPRPAAVVVANGEANLILQRETYQDLIRQDRLPERLK
>NZ_CP011456.1|WP_053540299.1|4440915_4441437_-|ribosomal-protein-S18-alanine-N-acetyltransferase
MISSDLKIQPLTTDNLTELLELDKACFDGLWTMEGYLRELESPNSHFLGLFSPFNHSELLGMGCFWSILEEAHITILAVHPQYHGQGLGKALLYSLLQTAADIGLERATLEVRDSNHVAISLYQKFGFKTAGKRRGYYKDNNEDALILWLSELQQPHFLKNLDQWATFMSSPF
>NZ_CP011456.1|WP_053540298.1|4440378_4440750_+|hypothetical-protein
MTFKNLQFNFEKIRPWLTLLAIAWLLASLGLGWLVNSLVIILGLLFLLPVIAFFGFRWWLQKNLVTNQCPVCGYELTGVNNSQVQCANCGEQLLVKNFQFQRFTPEGTIDVKAVEVQSQSLED
>NZ_CP011456.1|WP_053540297.1|4439772_4440219_+|anti-sigma-regulatory-factor
MLSIVQQDHRTVRSDLKLLNPVQQWFEEFCQQYLPKYGWSDSQLYRLNLALAEGFTNAVRHAHHALPPETTIEIQVSLWTDRLEVRIWDYGKPFNPDVITEPEPGTLQVGGYGWFLLRRLADKVVYERDSDSRNCLLIVKYCLEERQN
>NZ_CP011456.1|WP_039204858.1|4447032_4447632_-|hypothetical-protein
MSYSEFTLDKVRKAFALTIIDKINIFASIPEIECPDLLTEVLKENLPLALASNTEKSRSEMIIAPILIAARKYLNNQISLFSGIDFTVDTEQGLNGNCDFIISRSPELLIINAPVVTIVEAKKENINAGLGQCVAEMIAARMFNEREGNNIQTIYGTVTTGTNWKFLKLINQVVEIDLTDYYINNIGKILGILSSIVME
>NZ_CP011456.1|WP_053540304.1|4447694_4448102_-|hypothetical-protein
MDKPEEPQIEPETVELDPAFAQQLQKLHRLRVYGRWLFAGCLWLTIAPFCLWNLRTEISLLREYFTWVGLRYTLIFHPLFTLGLSLCIGMTTSVLVWQSRNIIWGLPLQEQENLKKQLYRIRQQGSSHPLWKWVC
>NZ_CP011456.1|WP_053540305.1|4448394_4449363_-|protein-translocase-subunit-SecF
MRLDINKARGTWWTISAVIILVGIISMVISTLNPSIKAPLRPSLDFIGGTRLQFVRDCGKPGNCDQPIDINLVREVAKSQGLGDSSIQLISENGQENGITIRTKNLETEQRSNLQNALTEKIGTFDPQKNQIDSVGATLGKELFTSGILALIVSFVGITVYMAFRFQLDYALLAIVALFHDILVTTGVFSILGLVFGVEVDSLFIVALLTITGFSVNDTVVIYDRIRETIKLHPEQPIAEIVDDAVNQTLSRSINTTLTTLLTLTAIFLFGGETLHYFSLALIVGFVMGAYSSIFIASTLLIWWRERSGNYSVATPISSQES
>NZ_CP011456.1|WP_053540306.1|4449359_4450772_-|protein-translocase-subunit-SecD
MQKQRSLLALIIVLFIAAITVILTIPVPLGLDLRGGSQLTIQVKPTAEIPQITERELEAVKKVVEGRINGLGVSEPLIQTIGTDKISVQLPGVNDPEQAERVLGGTAQLEFRIQKPNTETQLFAFQITRNDLKTKREELKKSKDQAAIDKNKEEFQKNNQAIAELFESTNPPLTGKYLKDAYGEPNQGTNWNVAIRFDQKGGELFAGLTKDLAGTGRSIGIFLDNEMISSPTVGPEHAATGITGGSAIITGRFQAQEANDLGVQLRGGALPVPVEIAERRTVGATLGKDSIQRSIYAGIGGLTLVLIFMVWYYRLPGMIANVSLIIYSILTWAAFCLLSVTLTLPGIAGFILSIGMAVDANVLIFERTREELQAGKSLYRSVESGFYRAFSSILDSNVTTWIACAALFWLGSGLVKGFALTLALGVGVSMFTAITCSRTLMFLVISIPSLRNTQLYAPNVPVANKTGVAQ
>NZ_CP011456.1|WP_039204864.1|4451208_4452192_-|alpha-ketoacid-dehydrogenase-subunit-beta
MAETLFFNALREAIDEEMARDSSVFVLGEDVGHYGGSYKVTKDLHQKYGDLRVLDTPIAENSFTGIAVGAAMTGLRPIIEGMNMGFLLLAFNQISNNAGMLRYTSGGNFKIPMVIRGPGGVGRQLGAEHSQRLEAYFQAVPGLKIVACSTPYNAKGLLKAAIRDDNPVLFFEHVLLYNLKEDLPETEYVLPLDKAEVVRQGKDVTILTYSRMRYHVLQAVKALEKQGYDPEVIDLISLKPLDFETIGASIRKTHRVIVVEECMRTGGIGAELTASINDRLFDELDAPVLRLSSQDIPTPYNGNLERLTIVQPEQIVEAVQKMMALRV
>NZ_CP011456.1|WP_081424276.1|4452228_4452513_+|hypothetical-protein
MVPLPRIPSSVALLLRTRNNFHIFYSRIQESGVRSRGSRGSRGSRGSRGSRGSRGSRGSRGSRGSRGSRGSRGSRESRGSRGVKSQKSGVRSQK
>NZ_CP011456.1|WP_053540307.1|4452586_4452769_-|hypothetical-protein
MGGVGGVGGVGGVGGVGGVGGVGGVGGVRSQESGVRKKKKEEGRRKTLRSRVSFSVMLLT
>NZ_CP011456.1|WP_053540308.1|4452882_4453416_+|hypothetical-protein
MTNNKLFIRKKPLLLLAMGFFTASLLPILPSKAENIFLPSDAPLQLDLLTQPKDNIITAKTIDPQKLTVPSLWWAKENSEKQLLDNWIVYPPSQTEPPRADLIVNQRIWGLLDYFGKYVFVNRLGGLASKFGYNIRIFNYQKEALATYTCNFSQSPASCRLQMNHRSQVGFSFALSN
>NZ_CP011456.1|WP_053540309.1|4453412_4454543_-|extracellular-solute-binding-protein
MDRRSFLLSISTLALSQAIAGCGTNQQPLLNVQLLKNSIPGQVVNQFRKTVTQEGKLKFTPINQLEDLFKLLQTWQQPPTNNQQQWTRYLPFNQNQKSPTANLITLGDYWLQTAIDQKLIQPLATANIKNLVNLNQKWQQIIKHDQEGKIWGVPYRWGNTVIIYNQEKFQQLGWTPTDWSDLWRSELQNRISLLNHPREVIGLVLKKLGESYNTDNINQISALETELKALNQQVKFYDSKNYLEPLIIGDTWLAVGWSDDIIPIINRYPKFAAVVPKSGTAIWADLWVSPTGVNNDSLAYQWLDFCLQPNTSKQIALLTKSNSPIDKTMVNGDIQKQLQNLLLTDSETFAKSEFLLPFPPAVMKEYEDLFMKIKKS
>NZ_CP011456.1|WP_053540310.1|4454794_4455142_+|hypothetical-protein
MESLEKQILTLSQQVNAIHEVIERLDMRLSQALSDSSLRQLPAIEHYLEKKQPANELKEWKHKDILLDSIPEMSYQAIDKQITPEIQIQRLTTQLTAAYHRIAALEEQLLKQRVY

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP011456_38

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011456_38

4547786-4548772

TypeIII

Consensus_repeat	Method
ATTCCTAATTACTGGGAATATTAATTGAATGGAAAC	CRISPRCasFinder
ATTCCNANTNNCTGGGNATATTAATTGAATGGAAAC	CRT
GTTTCCAT-------------TCAATTAATATCC-----------CCAG	PILER-CR

13 spacers

cas2,cas1,WYL,cas10,cmr3gr5,cmr4gr7

The CRISPR arrays of NZ_CP011456_38

>merge|NZ_CP011456|38|4547786-4548772|CRISPRCasFinder,CRT,PILER-CR
ATTCCTAATTACTGGGAATATTAATTGAATGGAAACTGCCTGTTGCAAAACTTAAATCTGACATGGTAGTTGACCTTATTCCTAATTACTGGGAATATTAATTGAATGGAAACAATACTAAACTTGCGATCGCCCTGGCTTCTTTATCATTCCTAATTACTGGGAATATTAATTGAATGGAAACGAGAAAACAAAGATTTTAATATCCCTCAGATAACCATTCCTAATTACTGGGAATATTAATTGAATGGAAACAGGAAATATTTAATCTGAGGAAGGATAGGAGAAGGATTCCTAATTACTGGGAATATTAATTGAATGGAAACTACTCTTGCACTATTAATTGGTCATCACTCAGCGATATTCCCACTCGCTGGGGATATTAATTGAATGGAAACAAGTCCGTCCGTTTTTGGGGATAAAATGTGGTTCCAATTCCCACTCGCTGGGGATATTAATTGAATGGAAACTCAATCAAACTTACTTGCATAATTAAAGCCTCCAGACTATTCCCACTCGCTGGGGATGTTAATTGAATGGAAACGCAGAATAAATTGGATGTGCCATAATTGGTTAGACCATTCCCACTCGGTGGGGATGTTAATTGAATGGAAACGATGGATCTGCCTTTGGCGATCGCTCTAATTGCCATTCACCATTCCCACTCGCTGGGGATGTTAATTGAATGGAAACATCCAATATCGGATATGATCATCAATTCGATTCTGGATTCCCACTCGCTGGGGATGTTAATTGAATGGAAACTTTTCTCGGTCTGTCTAAGAGGTCGAGCGGGCAGATAAACAAATTCCCACTCGCTGGGAATATTAATTGAATGGAAACTTCCAAGATTTGTAAGCTTCTAAAACTGTAATTAAATACCCACTCGCTGGGGATATTAATTGAATGGAAACTCCCAATATCTAATATGATCATCTATTCGAGATTTCATTTCCCACTCGCTGGGGATATTAATTGAATGAAAAC

>NZ_CP011456|38|37|4547786-4548772|CRISPRCasFinder
ATTCCTAATTACTGGGAATATTAATTGAATGGAAAC	TGCCTGTTGCAAAACTTAAATCTGACATGGTAGTTGACCTT
ATTCCTAATTACTGGGAATATTAATTGAATGGAAAC	AATACTAAACTTGCGATCGCCCTGGCTTCTTTATC
ATTCCTAATTACTGGGAATATTAATTGAATGGAAAC	GAGAAAACAAAGATTTTAATATCCCTCAGATAACC
ATTCCTAATTACTGGGAATATTAATTGAATGGAAAC	AGGAAATATTTAATCTGAGGAAGGATAGGAGAAGG
ATTCCTAATTACTGGGAATATTAATTGAATGGAAAC	TACTCTTGCACTATTAATTGGTCATCACTCAGCGAT
ATTCCCACTCGCTGGGGATATTAATTGAATGGAAAC	AAGTCCGTCCGTTTTTGGGGATAAAATGTGGTTCCA
ATTCCCACTCGCTGGGGATATTAATTGAATGGAAAC	TCAATCAAACTTACTTGCATAATTAAAGCCTCCAGACT
ATTCCCACTCGCTGGGGATGTTAATTGAATGGAAAC	GCAGAATAAATTGGATGTGCCATAATTGGTTAGACC
ATTCCCACTCGGTGGGGATGTTAATTGAATGGAAAC	GATGGATCTGCCTTTGGCGATCGCTCTAATTGCCATTCACC
ATTCCCACTCGCTGGGGATGTTAATTGAATGGAAAC	ATCCAATATCGGATATGATCATCAATTCGATTCTGG
ATTCCCACTCGCTGGGGATGTTAATTGAATGGAAAC	TTTTCTCGGTCTGTCTAAGAGGTCGAGCGGGCAGATAAACAA
ATTCCCACTCGCTGGGAATATTAATTGAATGGAAAC	TTCCAAGATTTGTAAGCTTCTAAAACTGTAATTAA
ATACCCACTCGCTGGGGATATTAATTGAATGGAAAC	TCCCAATATCTAATATGATCATCTATTCGAGATTTCA
TTTCCCACTCGCTGGGGATATTAATTGAATGAAAAC

>NZ_CP011456|38|6|4547786-4548772|CRT
ATTCCTAATTACTGGGAATATTAATTGAATGGAAAC	TGCCTGTTGCAAAACTTAAATCTGACATGGTAGTTGACCTT
ATTCCTAATTACTGGGAATATTAATTGAATGGAAAC	AATACTAAACTTGCGATCGCCCTGGCTTCTTTATC
ATTCCTAATTACTGGGAATATTAATTGAATGGAAAC	GAGAAAACAAAGATTTTAATATCCCTCAGATAACC
ATTCCTAATTACTGGGAATATTAATTGAATGGAAAC	AGGAAATATTTAATCTGAGGAAGGATAGGAGAAGG
ATTCCTAATTACTGGGAATATTAATTGAATGGAAAC	TACTCTTGCACTATTAATTGGTCATCACTCAGCGAT
ATTCCCACTCGCTGGGGATATTAATTGAATGGAAAC	AAGTCCGTCCGTTTTTGGGGATAAAATGTGGTTCCA
ATTCCCACTCGCTGGGGATATTAATTGAATGGAAAC	TCAATCAAACTTACTTGCATAATTAAAGCCTCCAGACT
ATTCCCACTCGCTGGGGATGTTAATTGAATGGAAAC	GCAGAATAAATTGGATGTGCCATAATTGGTTAGACC
ATTCCCACTCGGTGGGGATGTTAATTGAATGGAAAC	GATGGATCTGCCTTTGGCGATCGCTCTAATTGCCATTCACC
ATTCCCACTCGCTGGGGATGTTAATTGAATGGAAAC	ATCCAATATCGGATATGATCATCAATTCGATTCTGG
ATTCCCACTCGCTGGGGATGTTAATTGAATGGAAAC	TTTTCTCGGTCTGTCTAAGAGGTCGAGCGGGCAGATAAACAA
ATTCCCACTCGCTGGGAATATTAATTGAATGGAAAC	TTCCAAGATTTGTAAGCTTCTAAAACTGTAATTAA
ATACCCACTCGCTGGGGATATTAATTGAATGGAAAC	TCCCAATATCTAATATGATCATCTATTCGAGATTTCA
TTTCCCACTCGCTGGGGATATTAATTGAATGAAAAC

>NZ_CP011456|38|5|4547797-4548772|PILER-CR
CTGGGAATATTAATTGAATGGAAAC	TGCCTGTTGCAAAACTTAAATCTGACATGGTAGTTGACCTTATTCCTAATTA
CTGGGAATATTAATTGAATGGAAAC	AATACTAAACTTGCGATCGCCCTGGCTTCTTTATCATTCCTAATTA
CTGGGAATATTAATTGAATGGAAAC	GAGAAAACAAAGATTTTAATATCCCTCAGATAACCATTCCTAATTA
CTGGGAATATTAATTGAATGGAAAC	AGGAAATATTTAATCTGAGGAAGGATAGGAGAAGGATTCCTAATTA
CTGGGAATATTAATTGAATGGAAAC	TACTCTTGCACTATTAATTGGTCATCACTCAGCGATATTCCCACTCG
CTGGGGATATTAATTGAATGGAAAC	AAGTCCGTCCGTTTTTGGGGATAAAATGTGGTTCCAATTCCCACTCG
CTGGGGATATTAATTGAATGGAAAC	TCAATCAAACTTACTTGCATAATTAAAGCCTCCAGACTATTCCCACTCG
CTGGGGATGTTAATTGAATGGAAAC	GCAGAATAAATTGGATGTGCCATAATTGGTTAGACCATTCCCACTCG
GTGGGGATGTTAATTGAATGGAAAC	GATGGATCTGCCTTTGGCGATCGCTCTAATTGCCATTCACCATTCCCACTCG
CTGGGGATGTTAATTGAATGGAAAC	ATCCAATATCGGATATGATCATCAATTCGATTCTGGATTCCCACTCG
CTGGGGATGTTAATTGAATGGAAAC	TTTTCTCGGTCTGTCTAAGAGGTCGAGCGGGCAGATAAACAAATTCCCACTCG
CTGGGAATATTAATTGAATGGAAAC	TTCCAAGATTTGTAAGCTTCTAAAACTGTAATTAAATACCCACTCG
CTGGGGATATTAATTGAATGGAAAC	TCCCAATATCTAATATGATCATCTATTCGAGATTTCATTTCCCACTCG
CTGGGGATATTAATTGAATGAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011456.1\|WP_053540386.1\|4549087_4552081_+\|type-III-B-CRISPR-associated-protein-Cas10/Cmr2	cas10	cd09679_cas10_CAS-III	gnl\|CDD\|378863
NZ_CP011456.1\|WP_053540381.1\|4544006_4545194_-\|WYL-domain-containing-protein	WYL	pfam13280_WYL_CAS-I:CAS-III	gnl\|CDD\|379100
NZ_CP011456.1\|WP_053540384.1\|4547571_4547763_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053540379.1\|4538921_4540451_+\|DUF1565-domain-containing-protein	unknown	unknown	gnl\|CDD\|284923
NZ_CP011456.1\|WP_053540391.1\|4560843_4561137_-\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|223424
NZ_CP011456.1\|WP_039203889.1\|4543804_4544020_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_081424284.1\|4545663_4545879_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053540388.1\|4553225_4554002_+\|type-III-B-CRISPR-module-RAMP-protein-Cmr4	cmr4gr7	cd09682_cmr4gr7_CAS-III-B	gnl\|CDD\|274210
NZ_CP011456.1\|WP_053540382.1\|4546170_4547163_+\|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|376633
NZ_CP011456.1\|WP_053540393.1\|4563417_4564341_+\|1-aminocyclopropane-1-carboxylate-deaminase/D-cysteine-desulfhydrase	unknown	unknown	gnl\|CDD\|225313
NZ_CP011456.1\|WP_053537527.1\|4554092_4555112_+\|transposase	unknown	unknown	gnl\|CDD\|376573
NZ_CP011456.1\|WP_053540380.1\|4541408_4543496_-\|DUF1565-domain-containing-protein	unknown	unknown	gnl\|CDD\|284923
NZ_CP011456.1\|WP_053541354.1\|4558208_4559600_+\|amidase	unknown	unknown	gnl\|CDD\|223232
NZ_CP011456.1\|WP_053540383.1\|4547300_4547582_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP011456.1\|WP_053540378.1\|4537630_4538668_-\|thiamine-phosphate-synthase	unknown	unknown	gnl\|CDD\|235054
NZ_CP011456.1\|WP_053540387.1\|4552080_4553205_+\|CRISPR-associated-protein-Cmr3	cmr3gr5	cd09748_cmr3gr5_CAS-III-B	gnl\|CDD\|187879
NZ_CP011456.1\|WP_053540392.1\|4561141_4562137_-\|sodium-dependent-bicarbonate-transport-family-permease	unknown	unknown	gnl\|CDD\|377582
NZ_CP011456.1\|WP_053540389.1\|4556285_4557812_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053540390.1\|4560190_4560676_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053541353.1\|4540598_4541279_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP011456.1\|WP_053540386.1\|4549087_4552081_+\|type-III-B-CRISPR-associated-protein-Cas10/Cmr2	gnl\|CDD\|378863	pfam12469, DUF3692, CRISPR-associated protein. This domain family is found in bacteria and archaea, and is typically between 101 and 138 amino acids in length. The proteins in this family are frequently annotated as CRISPR-associated proteins however there is little accompanying literature to confirm this.	3.62084e-46
NZ_CP011456.1\|WP_053540381.1\|4544006_4545194_-\|WYL-domain-containing-protein	gnl\|CDD\|379100	pfam13280, WYL, WYL domain. WYL is a Sm-like SH3 beta-barrel fold containing domain. It is a member of the WYL-like superfamily, named for three conserved amino acids found in a subset of the superfamily. However, these residues are not strongly conserved throughout the family. Rather, the conservation pattern includes four basic residues and a position often occupied by a cysteine, which are predicted to line a ligand-binding groove typical of the Sm-like SH3 beta-barrels. A WYL domain protein (sll7009) is a negative regulator of the I-D CRISPR-Cas system in Synechocystis sp. It is predicted to be a ligand-sensing domain that could bind negatively charged ligands, such as nucleotides or nucleic acid fragments, to regulate CRISPR-Cas and other defense systems such as the abortive infection AbiG system.	4.81297e-11
NZ_CP011456.1\|WP_053540392.1\|4561141_4562137_-\|sodium-dependent-bicarbonate-transport-family-permease	gnl\|CDD\|377582	pfam05982, Sbt_1, Na+-dependent bicarbonate transporter superfamily. Family of bacterial proteins that are likely to be part of the Na(+)-dependent bicarbonate transporter (sbt) family. Members carry 10TMS in a 5+5 duplicated structure. The loop between helices 5 and 6 in Synechocystis PCC6803 is likely to be the location for regulatory mechanisms governing the activation of the transporter.	4.72821e-151
NZ_CP011456.1\|WP_053540379.1\|4538921_4540451_+\|DUF1565-domain-containing-protein	gnl\|CDD\|284923	pfam07602, DUF1565, Protein of unknown function (DUF1565). These proteins share a region of homology in their N termini, and are found in several phylogenetically diverse bacteria and in the archaeon Methanosarcina acetivorans. Some of these proteins also contain characterized domains such as pfam00395 and pfam03422.	1.34349e-40
NZ_CP011456.1\|WP_053540391.1\|4560843_4561137_-\|transcriptional-regulator	gnl\|CDD\|223424	COG0347, GlnK, Nitrogen regulatory protein PII [Amino acid transport and metabolism].	0.00035215
NZ_CP011456.1\|WP_053540378.1\|4537630_4538668_-\|thiamine-phosphate-synthase	gnl\|CDD\|235054	PRK02615, PRK02615, thiamine phosphate synthase.	0
NZ_CP011456.1\|WP_053540388.1\|4553225_4554002_+\|type-III-B-CRISPR-module-RAMP-protein-Cmr4	gnl\|CDD\|274210	TIGR02580, putative_CRISPR-associated_protein, CRISPR type III-B/RAMP module RAMP protein Cmr4. This model represents a CRISPR-associated protein from the family that includes TM1792 of Thermotoga maritima. This family is part of the broad RAMP superfamily (pfam03787) collection of CRISPR-associated proteins. It is the fourth of a recurring set of six proteins, four of are in the RAMP superfamily, that we designate the CRISPR RAMP module.	2.34591e-32
NZ_CP011456.1\|WP_053540382.1\|4546170_4547163_+\|CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	3.04202e-112
NZ_CP011456.1\|WP_053540393.1\|4563417_4564341_+\|1-aminocyclopropane-1-carboxylate-deaminase/D-cysteine-desulfhydrase	gnl\|CDD\|225313	COG2515, Acd, 1-aminocyclopropane-1-carboxylate deaminase [Amino acid transport and metabolism].	1.70129e-87
NZ_CP011456.1\|WP_053537527.1\|4554092_4555112_+\|transposase	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	5.60416e-21
NZ_CP011456.1\|WP_053540380.1\|4541408_4543496_-\|DUF1565-domain-containing-protein	gnl\|CDD\|284923	pfam07602, DUF1565, Protein of unknown function (DUF1565). These proteins share a region of homology in their N termini, and are found in several phylogenetically diverse bacteria and in the archaeon Methanosarcina acetivorans. Some of these proteins also contain characterized domains such as pfam00395 and pfam03422.	3.56695e-43
NZ_CP011456.1\|WP_053541354.1\|4558208_4559600_+\|amidase	gnl\|CDD\|223232	COG0154, GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Translation, ribosomal structure and biogenesis].	1.65398e-138
NZ_CP011456.1\|WP_053540383.1\|4547300_4547582_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	8.82566e-30
NZ_CP011456.1\|WP_053540387.1\|4552080_4553205_+\|CRISPR-associated-protein-Cmr3	gnl\|CDD\|187879	cd09748, Cmr3_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; This protein is a subunit of Cmr complex.	1.46503e-69

>NZ_CP011456.1|WP_053540384.1|4547571_4547763_-|hypothetical-protein
MQEVQGRFPKVTKQGGRITSKLPFKMHKTLIQQATEARNEKINISAIFPDLRTTHFAIIKTTQ
>NZ_CP011456.1|WP_053540383.1|4547300_4547582_+|CRISPR-associated-endonuclease-Cas2
MFLYVIAYDIPCNKRRKKVADLLEGYGQRVQYSVFECQLSTEKYQDLRRQLRKKLKLEEDNVRFYPLSRHTLSQVETWGVGISVIETPSSIIV
>NZ_CP011456.1|WP_053540382.1|4546170_4547163_+|CRISPR-associated-endonuclease-Cas1
MQSLYVSEQNCYVCLQKETLLVKQGETVYAEVQLPLLEQILIFGKSQLTTQVIRACLWRDIPIAYLSRMGYCYGRILPISRGYRQLSRYQQQLSPVEKLITARAMIKGKLKNSRVLLRRQKKKKESELLERVLQSLDYLADQVAQADNLERLMGFEGAGAAQYFSAFSECLTNPDFVFSGRSRRPPGNPVNAMLSFGYQVLWNHLLALIEIQGLDPYYACLHQAHDGHAALASDLIEEFRAPFIDSLVMWLINRKIVSAEADFEFKNGGCYLNNAGRKKFLRAFLQRMSEEIQTDEGIKQPKWDLLTKQVRAFKQFVYNPSHHYQPYRID
>NZ_CP011456.1|WP_081424284.1|4545663_4545879_+|hypothetical-protein
MSLWQGKRQEARGKSEEGLGDFTFLYTVWFYCVHLLRVVLWLEPEQNAELTSSGNGEYRSPKKSNLQRWWR
>NZ_CP011456.1|WP_053540381.1|4544006_4545194_-|WYL-domain-containing-protein
MPKKPTHPYTERLAFERLLLLIATLLKHPGIGSPDFFDLSNNENHDAISSVKVYLQKLAAELDIELPAEYPAIPTLRKDLETLRRCAILDRRMYRWGYYLGTGALSIAELKVAFNALASQAQYQGDAQARRIHETLSKRLRGLDMELKGDFFYPTRQHLNRAIIHTDPEEMVIQGETRDTLFHKLPLLEKAISKGEAIEISRSNDFYGFNRIGRIQIFPLQLIYHDIAWYLLYEYCENGHLAIGRLNRFNNHCIFIKILPRGLEKQKESLVKAYKLLENGWGLNLGEPEPQKLELDGTLNLINVKVRFFPPVSAFILEGERRHPHQKITTGLIDKTGQHTYIEYAVDLPPRSLNEFSRWVYRYMDKAEMLSPPQLVEQHRQSAQALFDRYFHGDR
>NZ_CP011456.1|WP_039203889.1|4543804_4544020_-|hypothetical-protein
MEIGRLALKIVVIARQEARVKKFAAILRFFTQFGFIVFTYLENSTKKIIQSRGMGILPVLVLLAGKMPAPQ
>NZ_CP011456.1|WP_053540380.1|4541408_4543496_-|DUF1565-domain-containing-protein
MVNSSLVATLYVNPVTGNDANTGSRSDPLKTITRALKQAKTSTIIQLASGTYSTANGEVFPLVIAPGVLVVGNEANKGQETIIAGSGEYQSSSFGIQNITLLLLGDASLLGMTVMNPAAKGTGAWIESSIPTVANSTFKDCTREGIFITGNSKPGIVDNLFINNKVCGLVIAKNSKGEVLRNVFQDNALGIAISDFAAPLVANNQLLANGTAIALSRDAKPVLRRNLITSNTQGGLLIAGNATPDLGSPQDPADNIFREQGKFDLQNVTDQKIISVGNQLSVPQVIGAIDFIAATADTPSQIGVSSRFADLEGHWAAAFVEALVSKDIINGFPDGTFQPATPVNRAQYAALITKTFQLPESNQLDKFKDVKSDFWAAKAIASASDRGFLKGFPDGTFRPGNNITKIQAIVSIVNGLNLSGGNPNVLMVYRDRAQIPSYATNATTVATQKLLVVNYPQPDQLEPLREITRAEIAVLIYQALVATGQENPLPSAYIVKPETEIPSFSDIVGHWAEPFIRALVSMNLTQGFADGTYQPDQAMSRAQYTALIAAAFNPPAKRPSPEFTDIAKDFWAANAIEIAARGGFVGGFSDRTFRPTQNVQRLQVIVSLVNGLGLVASDQKTLTYIDQEKIPEYARTAVTIATQQKIILNYPDPNLLAPTREATRAEVAAMVYQALVTSQRTKVINSPYIVLHISN
>NZ_CP011456.1|WP_053541353.1|4540598_4541279_-|hypothetical-protein
MLTTAPVTQTFAPPAELAAKLLTHYSFDLNGYNASELINQWQSEYPLHWLHLAVIEALYQGRYKAVSVQQILNFWRRKGETTYHFNMEFERMICSKFPERLTSAPLQVLPPTKQEIRMEEYKNLRLLPAPVSYKYQINKNLQPIEENRDYAPKSLAPVPSFGQLTGNIRQKQVIEEISPPPAQQLMLTATANHPPIGQFMPQKSDRTESFTSKLKSMTSERLELAF
>NZ_CP011456.1|WP_053540379.1|4538921_4540451_+|DUF1565-domain-containing-protein
MIIPQKSVNTLHNSLSCSILSLTVGLGVTSTILLMTSVSSVFAQVPTVGEQILQGEKTISQINQSFVNPSTGNDKTGNGSISAPWRTISQALEASPSNSVIILSSGTYSAQSGEVFPLILKPGIAIQGNINNKGQTVTITGGGEFLSRKFGGQNVTIVGANQASLSGVTVTNTNPRGYGLWIESSNIVVRESTFTNNTQDGIAIAGDGTPSISKNVFVRNGANGITISGNARPEIRENIFQETGFGINIAQNASPVVVANQIQNNRSGIIIQANATPMLRNNFIQNNREDGLVVIAQAKPDLGSSYDPGKNIFRNNGRLDINAKAAKLVISAAGNNLVSDRISGNVDLKGTTASTDRISGTNPSLTPSSVRKPITFTPSQRTVTPLKVQPVANPNQLPSLPNNLADSPRFNYTQLDSGAIEFVAPQAAIVSNPEMSTATGQNVSYRVLVMVANKQQENLVVSLVNDAFPKVWQGRRVMQVGIFNSQESAAKAVNLFNSKGLKSVVETVK
>NZ_CP011456.1|WP_053540378.1|4537630_4538668_-|thiamine-phosphate-synthase
MVSAHSHTQQTVYRILDANLDRAREGLRIIEEWCRFGLNNAQFSGICKHLRQELGAWHTAEIRAARDTPGDTGTDLSHPQEEQRADITSLLQANFCRVQEALRVLEEYGKLYHGNMGIACKQMRYQVYTLESNLMGYQRHQLLWRSHLYLVTSPTDNLFAIAEAALQGGLTLLQYREKTADDLVRLERATRLRELCHHYGALFIINDRVDLALAVDADGVHLGQQDMPIAIARQLLGTQRIIGRSTTNPQEMQGAIAEGADYIGVGPVYETPTKAGKAAAGLEYVKYVSQNCQIPWFAIGGIDMSNLNDVMNAGAQRVAVVRSLIESDQPTLSTQYFLSQLHRIK
>NZ_CP011456.1|WP_053540386.1|4549087_4552081_+|type-III-B-CRISPR-associated-protein-Cas10/Cmr2
MSEEYWRAKIWGLLHDPVLKALHNNSGRGKNSFYEQLEVMKPWVETGRTPDQSGGKALANILLADYIASASDRSAIGSTTASINYAPGDNHDKGLQITHLLSGAKQDFKIKLHTELIKSKRKEYLENKEKQLLAFVPPELQDPSIKDNIPKIKQLYWWLWRCLPQATCNLFEDSSLMLMPAETRIPDASIWSHVSMTAALAGGFAGYDLTLDEIKNWPRGKEVSHPYLAVFSFSPVQELIKASRKMRDFWAGSWLLHYLSAKVCWVLANQYGPDALLYPSLYQQPLIDHWLLQKYPEFKDLIKTPSPQSLLTAGFPNVIVLVLPKDKVQAAMQTAQQTLLEEWLKIGDLVFNELHDQRHWMKQLKSNHTTWKSWLKSQWQFYWTALPIGKLGEEFKCSADEKKHSEFEKWSDSQNEAYNIINNQNRLFKEKELELLREAHKQRWERQSRGFSANIGSWWGYIFDATRASLASVKNARNWEMPTAFGPRSTISGIGPVVNPGKDGKDWMTEGETQNYWQRQAGLFDGTEQLNATEVLKRGLHKILPDLLGIKDLEISYPDLTSGVAGYLKVNQDKTEHKRNFDNACREIGSKFDEITRILPEMRDKWGIPWMDEKKNPQQYHPRLLNAGWILEYLDNSEELKEEYTKEINESISKYYPSNNPSNWYVLAAGDGDGMSEWLKGTKMKTYRDYIPDGFAEKVTLTKFPDFLELTKRMGPSTHSALSRALLDFSNQLVPYLTQTRYAGKLIYGGGDDVLAYTNLWEWDKWLWDIRQCFRGAEDPHEEFSNKGDYWQYLKDDGKKVGLVDRPLFTMGSAATISFGIVIAHHSVPLAIALESLWEAEDAAKKHEYYHRCELPIENCGQKDCFNKKDAVQVRVLYGNGNTLKSTAKFDVFYQWQQLIMCESDSAIFEQAASLWSQHPAPIFGAILTWTQVFCDRRDQFQNNKPAKTQFQENLANFLKALFLTTQSKELDNEIQSWLKLAAFVKRNRDIKLGGAN
>NZ_CP011456.1|WP_053540387.1|4552080_4553205_+|CRISPR-associated-protein-Cmr3
MYWYKLTPLDILMLRDAKPFSPQERAWAGSVFPPNGHTIAGALRGLLGKETFNIVGPFLCYENTENTLYLPRPLGFVKSTALLPLKWETKSHINNALWDETQPCPLVKPHNAKDEDEEDEKDEEKINSLQKCEESSEVKFRQYLPYCVVKNYLETGEINKDNWKVVDGTHEDKPWTIETRSHNSIEPGTKQVKDADGYFVENAIRLHQNWSFAIGINHEITTPATIRLGGEGHRVIVESCPELGEQWQELQKISSDNFNHHDKSIAYLVTPGVFERPHTDKHQQRMNLCRPYPWEWKIKDGNFVSMSTDRPVPISCRIRDKDDERSIPAPQVFAAPPGSLYYLNKPQGLFQDNTGSRINNWRQLGYSEMLWIKY
>NZ_CP011456.1|WP_053540388.1|4553225_4554002_+|type-III-B-CRISPR-module-RAMP-protein-Cmr4
MIEYIYLYLLSPLHTGGTTQEGNLLGIARESHTNLPYIPSSTVRGKVRSTVTDKDTQYQLFGNDLKDGKLEQGNIWIGDASILWLPVPSLSHSVVWVSCPLLLQRWQRLQSSKLTIPSEYSCNFANGSAVYLKDAIIKSNELKSWTNSEEFVPQSSATTSINRLLVLPDKHCATLIQMSLWRQVKIKLDEHKSVDGGFRYEEAIPPDTLMYLPWGITSQANGTSQKSYDDFKSLLAANEILQIGGQESLGRGFVQQWM
>NZ_CP011456.1|WP_053537527.1|4554092_4555112_+|transposase
MRLKNFPEVVKTILKPLPKKDYPVLDTFSFVSVWLQYVMDKSIVSMRDLFQRLNNQGIDLKISNFSKASKKRDTQVFLEIITELNNQLRKKKGKEETQALFPIDSTIITLTSKLLWSQGYHQVKLFCGLDSLTSEVGGMVIHFGQGHDHKYGQETVEAIPSKGVGIMDRGFASSERISELKQQKNKAFVLRIKNNVTLEMLENGNCKVGKDEREVEIRVVAFCDIETKSEFRLATNLLNEGEEQVSNQEIMEIYIQRWQIELLWKFLKMHLKLDRLMTKNENGIRIQIMCCLIAYLILQLIEIPQEFGKTLLDKLRYLQSYMCQEISYVHWFRKLIWIR
>NZ_CP011456.1|WP_053540389.1|4556285_4557812_+|hypothetical-protein
MKTTNNTNQVSTLIITVGTRQIGWRCKDGIIRSFGADGNISYPKHINELYQELGIERGKHQDEDGKTYPWSGRDLGQRYYEYCKEWLGGDFSNVELLLDKIVIEGGVNQGLKHIILWGTDQPESITWNFRRLDTLWLAELMKGKIKSLFPDVRVDIHSPKINAGNSDEIREELEQLVLKEAISINENQEFILWIQTKGCTPVIASNVEICAAALVRQYQVFNASPNEPKEFFTTLENGLVTANHSQTFSLISMAEYFWSLEKVKIQSAWERGDFSEAQIWLKVHQHRHPVLYKLAGFLAQYSNWESNKDFYQKLKDWVSSKDASKLVNAEQVENWKTQLQKLQDDKITNLWESTLILELALNRENYTTAFIQFVQILEQLLYLQSINQKWYVKGWIVNHQDEATLQQLMQGWCIYKKFKEDNKWSKLMTDIRKKRNTIIHDGESITSTKISYLWANNGFDGVKIPTTPEIIKKLMMGLLKEVSTPPNLNNLLMRSLYQWGLQYLEDTI
>NZ_CP011456.1|WP_053541354.1|4558208_4559600_+|amidase
MNNNDLAFTPALELAQLIRLREVSPLELVEVYLERIERLNPQLGSYFTVTADLAIADATNKTELLTTTSELPPFFGVPISIKDLSAVAGVTCTYGNPALLNNIANHDDGVVTKIKQAGFIILGKTATSELGSYPYSEPMGFPPARNPWNLAYTPGGSSGGAAASVAAGLSAIAQGSDGGGSVRGPAACCGVVGIKPARGRVSKAPVGDRLGGIAVDGPLARTVADAAAMLDVISGYVTGDPYWLPDPQPSFLSATQVKLDPLKIAFSTNILPFGEADANCQQGVFKTVELLAQFGHQVEEKYPDFSNLIEPFKVVWQAGIAAAGIPSPALQPLNQWLFAKSGSVAEYLQALSQMQIVSRQIIAFFDTVDVLVLPVYLHSPIRVGEWADLSPEETFAKIVHWVAPCPVANATGLPAIALPVGFDSNGLPLSVQLIGKPAAESTLISLAAQLEAANPWIQHQPSL
>NZ_CP011456.1|WP_053540390.1|4560190_4560676_-|hypothetical-protein
MKSLIATFTEKLDFSESEIEAILSTPLNEVLNSPALKQELDSLDISLLKKTLPTAGAVLSEHLPLFYDWLKNELGVQNVPDSPDHTTKWVVGFLNNQESISHLVELHRPVPHAALEQAVPRLVGLFDGVEDEKVREEWEKAVAALCLVLVVDAREQAKLAS
>NZ_CP011456.1|WP_053540391.1|4560843_4561137_-|transcriptional-regulator
MQVFKKVEIIINSLELQKVLKILDHIGVSGYTIIEDVTGKGYRGRVIDDLEGHALTNGYVMTICNEEQERQIAEAVRPIIKKYGGVCIAADVKSIVD
>NZ_CP011456.1|WP_053540392.1|4561141_4562137_-|sodium-dependent-bicarbonate-transport-family-permease
MNSSPLLSNILNPPVLFFFLGMLAIFLQSDLEIPQPLPKLFSLYLLLAIGFKGGYEIEESAINPEIVLTLLAAIFMASVVPIYSFFILKLKLDTYNAAAIAATYGSISAVTFITAQSFLKVLNIDSSGHMVAALALMESPAIIVGIVLVRFFAKSQLEAGEGEGKAEKFSWGEVLREAFLNGSVFLLIGSVIVGILTGEKGWEKLHPFTQDIFYGVLSFFLLDMGMVAARRIKDLRNTGLFLIAFGIFMPVFNAIIGIFISKLIGMSEGNALLFAVLCASASYIAVPAAMRMTVPEANPSLYVSMALAITFPFNIIVGIPLYFNIIKTIGV
>NZ_CP011456.1|WP_053540393.1|4563417_4564341_+|1-aminocyclopropane-1-carboxylate-deaminase/D-cysteine-desulfhydrase
MSSIFFPPLIQQIHSEICAIADTRLYVLRLDIMHPHVNGNKWFKLKYNLVEAKEKNFSTILTFGGAYSNHIYATAAAGNLFGFRTIGLIRGEENIPLNPTLQFAVAQGMELVYIDRQTYKKRHTEELQNQLKQRFGEVFIIPEGGCNLNGLRGCIEILQTVRKFNTICLACGTGTTLAGMTLSLSQEQKVIGFPVLKGGDFLNEDINNLLTNYLASGLPTLVNTPAPWQLICDYHFGGYAKVTNKLKLFCQDFQQQYDIPLDYIYTGKMFYGVMDLIAKGFFKSESLLLIHTGGLQGNQDAISKLSV

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Crispr_ID: NZ_CP011456_39

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011456_39

4560043-4560172

TypeIII

Consensus_repeat	Method
AAATATTTCCATATTCAATCCTGTTAATCTTTCAATCCTGAG	CRISPRCasFinder

1 spacers

cmr4gr7,cmr3gr5,cas10,cas2,cas1

The CRISPR arrays of NZ_CP011456_39

>merge|NZ_CP011456|39|4560043-4560172|CRISPRCasFinder
AAATATTTCCATATTCAATCCTGTTAATCTTTCAATCCTGAGTATCCTGATTCAGACATAGAAACGATCTAAAAAACAGAAAGTTGGCAAATATTTCCATATTCAATCCTGTTAATCCTTCAATCCTGAG

>NZ_CP011456|39|38|4560043-4560172|CRISPRCasFinder
AAATATTTCCATATTCAATCCTGTTAATCTTTCAATCCTGAG	TATCCTGATTCAGACATAGAAACGATCTAAAAAACAGAAAGTTGGC
AAATATTTCCATATTCAATCCTGTTAATCCTTCAATCCTGAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011456.1\|WP_053537530.1\|4581427_4582627_-\|IS4-family-transposase	unknown	unknown	gnl\|CDD\|376573
NZ_CP011456.1\|WP_081424389.1\|4572374_4572956_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|369473
NZ_CP011456.1\|WP_053540386.1\|4549087_4552081_+\|type-III-B-CRISPR-associated-protein-Cas10/Cmr2	cas10	cd09679_cas10_CAS-III	gnl\|CDD\|378863
NZ_CP011456.1\|WP_053540397.1\|4583006_4583942_+\|DUF4351-domain-containing-protein	unknown	unknown	gnl\|CDD\|316753
NZ_CP011456.1\|WP_053540392.1\|4561141_4562137_-\|sodium-dependent-bicarbonate-transport-family-permease	unknown	unknown	gnl\|CDD\|377582
NZ_CP011456.1\|WP_053540384.1\|4547571_4547763_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053540385.1\|4548239_4548437_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_081424285.1\|4565637_4572378_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238882
NZ_CP011456.1\|WP_053540389.1\|4556285_4557812_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053540388.1\|4553225_4554002_+\|type-III-B-CRISPR-module-RAMP-protein-Cmr4	cmr4gr7	cd09682_cmr4gr7_CAS-III-B	gnl\|CDD\|274210
NZ_CP011456.1\|WP_053540382.1\|4546170_4547163_+\|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|376633
NZ_CP011456.1\|WP_053540393.1\|4563417_4564341_+\|1-aminocyclopropane-1-carboxylate-deaminase/D-cysteine-desulfhydrase	unknown	unknown	gnl\|CDD\|225313
NZ_CP011456.1\|WP_053537527.1\|4554092_4555112_+\|transposase	unknown	unknown	gnl\|CDD\|376573
NZ_CP011456.1\|WP_053540391.1\|4560843_4561137_-\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|223424
NZ_CP011456.1\|WP_053541354.1\|4558208_4559600_+\|amidase	unknown	unknown	gnl\|CDD\|223232
NZ_CP011456.1\|WP_053540383.1\|4547300_4547582_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP011456.1\|WP_053540387.1\|4552080_4553205_+\|CRISPR-associated-protein-Cmr3	cmr3gr5	cd09748_cmr3gr5_CAS-III-B	gnl\|CDD\|187879
NZ_CP011456.1\|WP_053540394.1\|4564329_4564590_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053540390.1\|4560190_4560676_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053540398.1\|4584320_4584554_-\|type-II-toxin-antitoxin-system-HicB-family-antitoxin	unknown	unknown	gnl\|CDD\|224514

Protein	Function_ID	Function_description	E-value
NZ_CP011456.1\|WP_053537530.1\|4581427_4582627_-\|IS4-family-transposase	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	3.11832e-09
NZ_CP011456.1\|WP_081424389.1\|4572374_4572956_-\|hypothetical-protein	gnl\|CDD\|369473	pfam07705, CARDB, CARDB. Cell adhesion related domain found in bacteria.	6.38793e-08
NZ_CP011456.1\|WP_053540386.1\|4549087_4552081_+\|type-III-B-CRISPR-associated-protein-Cas10/Cmr2	gnl\|CDD\|378863	pfam12469, DUF3692, CRISPR-associated protein. This domain family is found in bacteria and archaea, and is typically between 101 and 138 amino acids in length. The proteins in this family are frequently annotated as CRISPR-associated proteins however there is little accompanying literature to confirm this.	3.62084e-46
NZ_CP011456.1\|WP_053540397.1\|4583006_4583942_+\|DUF4351-domain-containing-protein	gnl\|CDD\|316753	pfam14261, DUF4351, Domain of unknown function (DUF4351). This domain is found in bacteria, and is approximately 60 amino acids in length.	1.13438e-19
NZ_CP011456.1\|WP_053540392.1\|4561141_4562137_-\|sodium-dependent-bicarbonate-transport-family-permease	gnl\|CDD\|377582	pfam05982, Sbt_1, Na+-dependent bicarbonate transporter superfamily. Family of bacterial proteins that are likely to be part of the Na(+)-dependent bicarbonate transporter (sbt) family. Members carry 10TMS in a 5+5 duplicated structure. The loop between helices 5 and 6 in Synechocystis PCC6803 is likely to be the location for regulatory mechanisms governing the activation of the transporter.	4.72821e-151
NZ_CP011456.1\|WP_081424285.1\|4565637_4572378_-\|hypothetical-protein	gnl\|CDD\|238882	cd01846, fatty_acyltransferase_like, Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Might catalyze fatty acid transfer between phosphatidylcholine and sterols.	1.73513e-58
NZ_CP011456.1\|WP_053540388.1\|4553225_4554002_+\|type-III-B-CRISPR-module-RAMP-protein-Cmr4	gnl\|CDD\|274210	TIGR02580, putative_CRISPR-associated_protein, CRISPR type III-B/RAMP module RAMP protein Cmr4. This model represents a CRISPR-associated protein from the family that includes TM1792 of Thermotoga maritima. This family is part of the broad RAMP superfamily (pfam03787) collection of CRISPR-associated proteins. It is the fourth of a recurring set of six proteins, four of are in the RAMP superfamily, that we designate the CRISPR RAMP module.	2.34591e-32
NZ_CP011456.1\|WP_053540382.1\|4546170_4547163_+\|CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	3.04202e-112
NZ_CP011456.1\|WP_053540393.1\|4563417_4564341_+\|1-aminocyclopropane-1-carboxylate-deaminase/D-cysteine-desulfhydrase	gnl\|CDD\|225313	COG2515, Acd, 1-aminocyclopropane-1-carboxylate deaminase [Amino acid transport and metabolism].	1.70129e-87
NZ_CP011456.1\|WP_053537527.1\|4554092_4555112_+\|transposase	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	5.60416e-21
NZ_CP011456.1\|WP_053540391.1\|4560843_4561137_-\|transcriptional-regulator	gnl\|CDD\|223424	COG0347, GlnK, Nitrogen regulatory protein PII [Amino acid transport and metabolism].	0.00035215
NZ_CP011456.1\|WP_053541354.1\|4558208_4559600_+\|amidase	gnl\|CDD\|223232	COG0154, GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Translation, ribosomal structure and biogenesis].	1.65398e-138
NZ_CP011456.1\|WP_053540383.1\|4547300_4547582_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	8.82566e-30
NZ_CP011456.1\|WP_053540387.1\|4552080_4553205_+\|CRISPR-associated-protein-Cmr3	gnl\|CDD\|187879	cd09748, Cmr3_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; This protein is a subunit of Cmr complex.	1.46503e-69
NZ_CP011456.1\|WP_053540398.1\|4584320_4584554_-\|type-II-toxin-antitoxin-system-HicB-family-antitoxin	gnl\|CDD\|224514	COG1598, COG1598, Predicted nuclease of the RNAse H fold, HicB family [General function prediction only].	2.46877e-15

>NZ_CP011456.1|WP_053541354.1|4558208_4559600_+|amidase
MNNNDLAFTPALELAQLIRLREVSPLELVEVYLERIERLNPQLGSYFTVTADLAIADATNKTELLTTTSELPPFFGVPISIKDLSAVAGVTCTYGNPALLNNIANHDDGVVTKIKQAGFIILGKTATSELGSYPYSEPMGFPPARNPWNLAYTPGGSSGGAAASVAAGLSAIAQGSDGGGSVRGPAACCGVVGIKPARGRVSKAPVGDRLGGIAVDGPLARTVADAAAMLDVISGYVTGDPYWLPDPQPSFLSATQVKLDPLKIAFSTNILPFGEADANCQQGVFKTVELLAQFGHQVEEKYPDFSNLIEPFKVVWQAGIAAAGIPSPALQPLNQWLFAKSGSVAEYLQALSQMQIVSRQIIAFFDTVDVLVLPVYLHSPIRVGEWADLSPEETFAKIVHWVAPCPVANATGLPAIALPVGFDSNGLPLSVQLIGKPAAESTLISLAAQLEAANPWIQHQPSL
>NZ_CP011456.1|WP_053540389.1|4556285_4557812_+|hypothetical-protein
MKTTNNTNQVSTLIITVGTRQIGWRCKDGIIRSFGADGNISYPKHINELYQELGIERGKHQDEDGKTYPWSGRDLGQRYYEYCKEWLGGDFSNVELLLDKIVIEGGVNQGLKHIILWGTDQPESITWNFRRLDTLWLAELMKGKIKSLFPDVRVDIHSPKINAGNSDEIREELEQLVLKEAISINENQEFILWIQTKGCTPVIASNVEICAAALVRQYQVFNASPNEPKEFFTTLENGLVTANHSQTFSLISMAEYFWSLEKVKIQSAWERGDFSEAQIWLKVHQHRHPVLYKLAGFLAQYSNWESNKDFYQKLKDWVSSKDASKLVNAEQVENWKTQLQKLQDDKITNLWESTLILELALNRENYTTAFIQFVQILEQLLYLQSINQKWYVKGWIVNHQDEATLQQLMQGWCIYKKFKEDNKWSKLMTDIRKKRNTIIHDGESITSTKISYLWANNGFDGVKIPTTPEIIKKLMMGLLKEVSTPPNLNNLLMRSLYQWGLQYLEDTI
>NZ_CP011456.1|WP_053537527.1|4554092_4555112_+|transposase
MRLKNFPEVVKTILKPLPKKDYPVLDTFSFVSVWLQYVMDKSIVSMRDLFQRLNNQGIDLKISNFSKASKKRDTQVFLEIITELNNQLRKKKGKEETQALFPIDSTIITLTSKLLWSQGYHQVKLFCGLDSLTSEVGGMVIHFGQGHDHKYGQETVEAIPSKGVGIMDRGFASSERISELKQQKNKAFVLRIKNNVTLEMLENGNCKVGKDEREVEIRVVAFCDIETKSEFRLATNLLNEGEEQVSNQEIMEIYIQRWQIELLWKFLKMHLKLDRLMTKNENGIRIQIMCCLIAYLILQLIEIPQEFGKTLLDKLRYLQSYMCQEISYVHWFRKLIWIR
>NZ_CP011456.1|WP_053540388.1|4553225_4554002_+|type-III-B-CRISPR-module-RAMP-protein-Cmr4
MIEYIYLYLLSPLHTGGTTQEGNLLGIARESHTNLPYIPSSTVRGKVRSTVTDKDTQYQLFGNDLKDGKLEQGNIWIGDASILWLPVPSLSHSVVWVSCPLLLQRWQRLQSSKLTIPSEYSCNFANGSAVYLKDAIIKSNELKSWTNSEEFVPQSSATTSINRLLVLPDKHCATLIQMSLWRQVKIKLDEHKSVDGGFRYEEAIPPDTLMYLPWGITSQANGTSQKSYDDFKSLLAANEILQIGGQESLGRGFVQQWM
>NZ_CP011456.1|WP_053540387.1|4552080_4553205_+|CRISPR-associated-protein-Cmr3
MYWYKLTPLDILMLRDAKPFSPQERAWAGSVFPPNGHTIAGALRGLLGKETFNIVGPFLCYENTENTLYLPRPLGFVKSTALLPLKWETKSHINNALWDETQPCPLVKPHNAKDEDEEDEKDEEKINSLQKCEESSEVKFRQYLPYCVVKNYLETGEINKDNWKVVDGTHEDKPWTIETRSHNSIEPGTKQVKDADGYFVENAIRLHQNWSFAIGINHEITTPATIRLGGEGHRVIVESCPELGEQWQELQKISSDNFNHHDKSIAYLVTPGVFERPHTDKHQQRMNLCRPYPWEWKIKDGNFVSMSTDRPVPISCRIRDKDDERSIPAPQVFAAPPGSLYYLNKPQGLFQDNTGSRINNWRQLGYSEMLWIKY
>NZ_CP011456.1|WP_053540386.1|4549087_4552081_+|type-III-B-CRISPR-associated-protein-Cas10/Cmr2
MSEEYWRAKIWGLLHDPVLKALHNNSGRGKNSFYEQLEVMKPWVETGRTPDQSGGKALANILLADYIASASDRSAIGSTTASINYAPGDNHDKGLQITHLLSGAKQDFKIKLHTELIKSKRKEYLENKEKQLLAFVPPELQDPSIKDNIPKIKQLYWWLWRCLPQATCNLFEDSSLMLMPAETRIPDASIWSHVSMTAALAGGFAGYDLTLDEIKNWPRGKEVSHPYLAVFSFSPVQELIKASRKMRDFWAGSWLLHYLSAKVCWVLANQYGPDALLYPSLYQQPLIDHWLLQKYPEFKDLIKTPSPQSLLTAGFPNVIVLVLPKDKVQAAMQTAQQTLLEEWLKIGDLVFNELHDQRHWMKQLKSNHTTWKSWLKSQWQFYWTALPIGKLGEEFKCSADEKKHSEFEKWSDSQNEAYNIINNQNRLFKEKELELLREAHKQRWERQSRGFSANIGSWWGYIFDATRASLASVKNARNWEMPTAFGPRSTISGIGPVVNPGKDGKDWMTEGETQNYWQRQAGLFDGTEQLNATEVLKRGLHKILPDLLGIKDLEISYPDLTSGVAGYLKVNQDKTEHKRNFDNACREIGSKFDEITRILPEMRDKWGIPWMDEKKNPQQYHPRLLNAGWILEYLDNSEELKEEYTKEINESISKYYPSNNPSNWYVLAAGDGDGMSEWLKGTKMKTYRDYIPDGFAEKVTLTKFPDFLELTKRMGPSTHSALSRALLDFSNQLVPYLTQTRYAGKLIYGGGDDVLAYTNLWEWDKWLWDIRQCFRGAEDPHEEFSNKGDYWQYLKDDGKKVGLVDRPLFTMGSAATISFGIVIAHHSVPLAIALESLWEAEDAAKKHEYYHRCELPIENCGQKDCFNKKDAVQVRVLYGNGNTLKSTAKFDVFYQWQQLIMCESDSAIFEQAASLWSQHPAPIFGAILTWTQVFCDRRDQFQNNKPAKTQFQENLANFLKALFLTTQSKELDNEIQSWLKLAAFVKRNRDIKLGGAN
>NZ_CP011456.1|WP_053540385.1|4548239_4548437_-|hypothetical-protein
MAIRAIAKGRSIVSIQLTSPPSGNGLTNYGTSNLFCVSIQLTSPASGNSLEALIMQVSLIEFPFN
>NZ_CP011456.1|WP_053540384.1|4547571_4547763_-|hypothetical-protein
MQEVQGRFPKVTKQGGRITSKLPFKMHKTLIQQATEARNEKINISAIFPDLRTTHFAIIKTTQ
>NZ_CP011456.1|WP_053540383.1|4547300_4547582_+|CRISPR-associated-endonuclease-Cas2
MFLYVIAYDIPCNKRRKKVADLLEGYGQRVQYSVFECQLSTEKYQDLRRQLRKKLKLEEDNVRFYPLSRHTLSQVETWGVGISVIETPSSIIV
>NZ_CP011456.1|WP_053540382.1|4546170_4547163_+|CRISPR-associated-endonuclease-Cas1
MQSLYVSEQNCYVCLQKETLLVKQGETVYAEVQLPLLEQILIFGKSQLTTQVIRACLWRDIPIAYLSRMGYCYGRILPISRGYRQLSRYQQQLSPVEKLITARAMIKGKLKNSRVLLRRQKKKKESELLERVLQSLDYLADQVAQADNLERLMGFEGAGAAQYFSAFSECLTNPDFVFSGRSRRPPGNPVNAMLSFGYQVLWNHLLALIEIQGLDPYYACLHQAHDGHAALASDLIEEFRAPFIDSLVMWLINRKIVSAEADFEFKNGGCYLNNAGRKKFLRAFLQRMSEEIQTDEGIKQPKWDLLTKQVRAFKQFVYNPSHHYQPYRID
>NZ_CP011456.1|WP_053540390.1|4560190_4560676_-|hypothetical-protein
MKSLIATFTEKLDFSESEIEAILSTPLNEVLNSPALKQELDSLDISLLKKTLPTAGAVLSEHLPLFYDWLKNELGVQNVPDSPDHTTKWVVGFLNNQESISHLVELHRPVPHAALEQAVPRLVGLFDGVEDEKVREEWEKAVAALCLVLVVDAREQAKLAS
>NZ_CP011456.1|WP_053540391.1|4560843_4561137_-|transcriptional-regulator
MQVFKKVEIIINSLELQKVLKILDHIGVSGYTIIEDVTGKGYRGRVIDDLEGHALTNGYVMTICNEEQERQIAEAVRPIIKKYGGVCIAADVKSIVD
>NZ_CP011456.1|WP_053540392.1|4561141_4562137_-|sodium-dependent-bicarbonate-transport-family-permease
MNSSPLLSNILNPPVLFFFLGMLAIFLQSDLEIPQPLPKLFSLYLLLAIGFKGGYEIEESAINPEIVLTLLAAIFMASVVPIYSFFILKLKLDTYNAAAIAATYGSISAVTFITAQSFLKVLNIDSSGHMVAALALMESPAIIVGIVLVRFFAKSQLEAGEGEGKAEKFSWGEVLREAFLNGSVFLLIGSVIVGILTGEKGWEKLHPFTQDIFYGVLSFFLLDMGMVAARRIKDLRNTGLFLIAFGIFMPVFNAIIGIFISKLIGMSEGNALLFAVLCASASYIAVPAAMRMTVPEANPSLYVSMALAITFPFNIIVGIPLYFNIIKTIGV
>NZ_CP011456.1|WP_053540393.1|4563417_4564341_+|1-aminocyclopropane-1-carboxylate-deaminase/D-cysteine-desulfhydrase
MSSIFFPPLIQQIHSEICAIADTRLYVLRLDIMHPHVNGNKWFKLKYNLVEAKEKNFSTILTFGGAYSNHIYATAAAGNLFGFRTIGLIRGEENIPLNPTLQFAVAQGMELVYIDRQTYKKRHTEELQNQLKQRFGEVFIIPEGGCNLNGLRGCIEILQTVRKFNTICLACGTGTTLAGMTLSLSQEQKVIGFPVLKGGDFLNEDINNLLTNYLASGLPTLVNTPAPWQLICDYHFGGYAKVTNKLKLFCQDFQQQYDIPLDYIYTGKMFYGVMDLIAKGFFKSESLLLIHTGGLQGNQDAISKLSV
>NZ_CP011456.1|WP_053540394.1|4564329_4564590_-|hypothetical-protein
MSRINPYTLQMQITQMFAQGQSFFALTKVQDWLKEHNQNPLDFEIFFHKKPAPPGSKEVMVIEIELKRKDGQPVDPWLQEQANLHA
>NZ_CP011456.1|WP_081424285.1|4565637_4572378_-|hypothetical-protein
MKLDSVSTEAVNELYLRYGEVPTRSAFDLGFSEALSPDQEIVIPETQAGTYYVLAYGQTVAESTPSFSIEAKLLDFEIHSLSTKVGGNSGKVTVVISGAKFDSGTTFTLVDKNLGIEIATSRLDLLDSTKAFATFNLKGKKAGSYNLVAKNKDNQTVTLQDSFSVVEGGKANFETDIIAPSAVRPGDIISITIQYANNGNVDFESPLGLLVSETEAPVSFTKEGLTNETTLDLVLKAENSPFGVLAPGATGSITFYTKALSSLNSLEFSLSVLDDPTTPLDWSPYIKRFESEFPESFTDPTLTANFWNIFRASVGETVGDLQTNLVAAQQLLLSSLQDAAQSAGTTLSKDNYATVSIEDFYNAAFLTASSYADQPITAQAVNNLNIAPFSESLSDSSFSQEVSKLNLASSEGALSALSAGDPPLNNGLTDHKQINGKDIYFNIWNKGDVQKNETYVIIHGLNNTGGNPGNNFQAAEWMQQMAAAIKAKDKTANIILVDWQAAAGFGQVSLGSQLYYKAADNSQLLGNVVAQYLKEKNYAPGKVTLIGHSLGAQMAGDAGNVYDAQNGTRLNRIIALDAAGPSFEKILNLIKTGPDRHVDASDANQVIGIHSSNWFGYDDPFGTQDLYLNSRMRIGGIFYAHPTAPNVKEEKIYQIYNHGYAIKIFNSILNGNTIKDNSGSNQDLNWNTLLSSYPDNYKKLTSSPGVWDFQEQKIGVVLDPASPKADYPSIKENHIPASALIGTFKTYEKNASSTNFQYKLIGNPENGFEIKNNDELWSTKPFDYETVSSYQIEVETTQTDPFDSKSLIPYDDSEFFTIRILDMPGPDDPNDGAGAGGGAGGGADGGGITSASYRSQPYTPLPPKPKPNKRKRIPVVFPRDPNDIIGPTGFGEEKWTSASSTLPYTIRFENISTATAPAQTVTITHPLDTDLDFRTFRLGSFGWGGLIFDVPTNTPFYNQRLDLTATRGYFVDVTAGIDLVKGEAFWIVTTIDPDTGEVTTDALTGFLPPNNADGIGDGFVNYTIKAKRDVPTGTVIDAKATIIFDTEAPIDTPPIFNTLDAGKPTSSVKALPTIVPDTEFLVNWTGNDDANGSALATYAIYVSDNGGEFTAWLDKTTLTEATYVGKIGHTYAFYSVATDNSGLTEAVPNQADTITSVGSIVDVNHPPTVLQSIADQSTIEDTTFSFTIPANTFTDIDAGDVLSYSATLENGNSLPSWLTFNSTTRTFSGTPTNDHVGNLNVKAIATDKAGATVSDVFVLAVENINDAPTLLNAIADQNAKQGTAFNFQVPSNTFTDIDAGDVLSYSATLENGDALPSWLTFNSTTRTFSGTPTNDNVGNLNIKAIATDKAGANISDIFVITVENVNDAPIVANLIADQNAKQGNAFSFQIPTNTFTDIDAGDVLTYSATLENGNALPSWLTFNSTTRTFSGTPTNDNVGNFNVKAIAIDKAGANVSDIFVITVENVNDAPILNSAIADQTAKQGDAFSFQIPTNTFTDVDAGDVLTYSATLENGNALPSWLTFNPTIRTFSGTPTNDHVGNLNVKAIATDKAGATVSDIFVITVENINDAPTLENTIADQNAKQGTAFSFQIPTNTFTDIDAGDVLTYSATLENGNALPNWLTFNSTTRTFSGTPTNDNVGNLNVKVAATDKTGASVNDTFTIKVQNVNTAPVLKNPLLDQTVKVNSTFTFTLPQNTFSDPDAVNPYKNLVIFGDSLSDTGNAYKASGNTFPPSPNYQGRLSNGLIWVDYFAPDLQFTNPSIQNYAFLGANTGVSNTFGQITVPGLLTQIQQFKTVNTNSIGKDGLYVIWAGANDFLNLATDPTQAVTNAVTNISSAITTLAGLGAKEIVVGNLTDLGATPLSIANNNVANARAISIGFNAALTQALTNLEPALNVDLSLVDIFGLSTAFQTNPANYKFTNITQPLITVTTPVNPDQYAFWDDVHPTNRLHQLVTDTFENTLLNDAVIPDLIKYSATLADGSKLPDWLNFNSTTRTFSGTPNTGNVGKLDVKVIATDKAGATVNDIFTLAVNQSTIVGTPGDDKLIATPGSQFDGQSNIVFTGAGKDEVDLSTVSAFPNSGNNIVDLGSGEDTMFVNKGDRAFGSDGNDIFDARDGQGNNRMSGGAGDDIFYLGANDRSLGGDGKDIFRVSLGGGNLISGGAGADQFWIVNAELPKAANTVLDFQLGTDVIGIQGAVSLGITTSTLQLNQVGADTAIVFNNQTLATLTGIQASSLSLTDSKQFVFA
>NZ_CP011456.1|WP_081424389.1|4572374_4572956_-|hypothetical-protein
MSGSFYLFAKTDAGNSLYEGTVENNNVAYDPTSVVVSLAQPADLVVGTITIPANGVTGQSASITYTVTNEGSNAVVGNWSDSLYLSKDGQWDINDLFLGQVDNSREVLSGNSYTNTLTASLPGVVPGDYQVIIRSDIRNEIPESNESNNLKATLDKVNMDVERLILGTPSTGSLAQGQGGTTALRSARGKRYG
>NZ_CP011456.1|WP_053537530.1|4581427_4582627_-|IS4-family-transposase
MLPQSYQTIFRKHLSEQQYLTLEILLLLIQAHRQVKLSKLASLFPQPIKYESRKRNLQRFLGIGKLCVKLLWFPLIKYWIRQSLTPKQLNREQRRYFHKKQYQKYGYWMVALDRTQWKGRNIFMVTLVWGTHALPLYWETLNHVGNSNLQTQKRLIKTAIKLLKKCRIVVLADREFHSPKLAKWLDEQGVYFALRQKKNLYFQEKPEQEYQVLKNQGFKPGMSRFYEKVKCGKGDELGLFNIAVYWKRKYRNSGPKEPWYILTNLPTLQQTLCLYRCRWGIEQFFKDCKTGGYNLEDTKVNETRFLALVLLIVIAYSLATMHGQRMKKLGIETYAGRIQQHQDKYPRQSDFSFALYGQLWIYGMELWADLALNLINLKPHKRLFFQRGFQALSLMKQAL
>NZ_CP011456.1|WP_053540397.1|4583006_4583942_+|DUF4351-domain-containing-protein
MSEVTANYDQSWKEALNEYFESFVAFFFPVAHQAIDWTKTPESLDKELQEITASGETKNRITDKLYKVWLLDQTQVWILIHIEIQSQYDVNFEERMYIYNYRAFDLYHQFVVSVAILGDTSPSWRPNSYDRAMLDCELSLKFPIAKILDYESKWDELEKSDNPFATIVMAHLKTKATTSNLTEREQWKWILIRGLYDRGFTKEKLVKLFKIIDTMMTLPKQLQAGLVTKIKQFEEERTMPLISPTEQLAMERGEQQLVIRLLNRRIGEIELSLIDSIRALTIEKLELLGEALLDFSSMTDLEQWLQNNPES
>NZ_CP011456.1|WP_053540398.1|4584320_4584554_-|type-II-toxin-antitoxin-system-HicB-family-antitoxin
MTLNNYNFNGFTINLYIDEQGDWLAHLQEIPNISAFGDTPEEALQELKLAWELVKEDYQQKGKEIPFAPVRRKLYSS

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Crispr_ID: NZ_CP011456_40

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011456_40

4707468-4707577

Unclear

V-U5

Consensus_repeat	Method
GTTTCAACACCCCTCCCGGAGTGGGGCGGGTTGAAAG	CRISPRCasFinder

1 spacers

c2c5_V-U5

The CRISPR arrays of NZ_CP011456_40

>merge|NZ_CP011456|40|4707468-4707577|CRISPRCasFinder
GTTTCAACACCCCTCCCGGAGTGGGGCGGGTTGAAAGTCCGCAGATTGGAAAGAATATGAACAGGACTATTCCGTTTCAACACCCCTCCCGGAGTGGGGCGGGTTGAAAG

>NZ_CP011456|40|39|4707468-4707577|CRISPRCasFinder
GTTTCAACACCCCTCCCGGAGTGGGGCGGGTTGAAAG	TCCGCAGATTGGAAAGAATATGAACAGGACTATTCC
GTTTCAACACCCCTCCCGGAGTGGGGCGGGTTGAAAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011456.1\|WP_053540479.1\|4718963_4719467_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227708
NZ_CP011456.1\|WP_053540475.1\|4709061_4710033_+\|NAD(P)H-dependent-glycerol-3-phosphate-dehydrogenase	unknown	unknown	gnl\|CDD\|237771
NZ_CP011456.1\|WP_053540472.1\|4704976_4705402_-\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133380
NZ_CP011456.1\|WP_053540478.1\|4718318_4718636_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_081424290.1\|4711767_4712097_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053540470.1\|4703217_4703427_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_039203603.1\|4712787_4713765_-\|cell-wall-binding-protein	unknown	unknown	gnl\|CDD\|225943
NZ_CP011456.1\|WP_053540473.1\|4705470_4707369_+\|hypothetical-protein	c2c5_V-U5	-	unknown
NZ_CP011456.1\|WP_053540465.1\|4697517_4697799_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378823
NZ_CP011456.1\|WP_053540474.1\|4708164_4709034_+\|lipoyl-synthase	unknown	unknown	gnl\|CDD\|235493
NZ_CP011456.1\|WP_053540477.1\|4717738_4718122_-\|GxxExxY-protein	unknown	unknown	gnl\|CDD\|275083
NZ_CP011456.1\|WP_053540476.1\|4713784_4717519_-\|cobaltochelatase-subunit-CobN	unknown	unknown	gnl\|CDD\|235663
NZ_CP011456.1\|WP_039203605.1\|4710581_4711814_+\|RNA-polymerase-sigma-factor-SigC	unknown	unknown	gnl\|CDD\|236067
NZ_CP011456.1\|WP_053540466.1\|4697840_4698302_-\|PIN-domain-containing-protein	unknown	unknown	gnl\|CDD\|350256
NZ_CP011456.1\|WP_053540467.1\|4698291_4698567_-\|DUF2281-domain-containing-protein	unknown	unknown	gnl\|CDD\|378366
NZ_CP011456.1\|WP_053540468.1\|4700557_4700956_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379367
NZ_CP011456.1\|WP_053540471.1\|4703467_4704763_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053540469.1\|4701030_4702554_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_081424391.1\|4699682_4700321_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|379233
NZ_CP011456.1\|WP_027404555.1\|4712124_4712580_+\|transcriptional-repressor	unknown	unknown	gnl\|CDD\|366663

Protein	Function_ID	Function_description	E-value
NZ_CP011456.1\|WP_053540479.1\|4718963_4719467_-\|hypothetical-protein	gnl\|CDD\|227708	COG5421, COG5421, Transposase [DNA replication, recombination, and repair].	3.60401e-07
NZ_CP011456.1\|WP_053540475.1\|4709061_4710033_+\|NAD(P)H-dependent-glycerol-3-phosphate-dehydrogenase	gnl\|CDD\|237771	PRK14619, PRK14619, NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional.	0
NZ_CP011456.1\|WP_053540472.1\|4704976_4705402_-\|MerR-family-transcriptional-regulator	gnl\|CDD\|133380	cd01105, HTH_GlnR-like, Helix-Turn-Helix DNA binding domain of GlnR-like transcription regulators. Helix-turn-helix (HTH) transcription regulator GlnR and related proteins, N-terminal domain. The GlnR and TnrA (also known as ScgR) proteins have been shown to regulate expression of glutamine synthetase as well as several genes involved in nitrogen metabolism. These proteins share the N-terminal DNA binding domain with other transcription regulators of the MerR superfamily that promote transcription by reconfiguring the spacer between the -35 and -10 promoter elements. A typical MerR regulator is comprised of two distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their conserved N-terminal domains contain predicted winged HTH motifs that mediate DNA binding, while the dissimilar C-terminal domains bind specific coactivator molecules.	1.90386e-19
NZ_CP011456.1\|WP_081424391.1\|4699682_4700321_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|379233	pfam13518, HTH_28, Helix-turn-helix domain. This helix-turn-helix domain is often found in transposases and is likely to be DNA-binding.	2.45486e-06
NZ_CP011456.1\|WP_039203603.1\|4712787_4713765_-\|cell-wall-binding-protein	gnl\|CDD\|225943	COG3409, COG3409, Putative peptidoglycan-binding domain-containing protein [Cell envelope biogenesis, outer membrane].	1.89444e-22
NZ_CP011456.1\|WP_053540465.1\|4697517_4697799_-\|hypothetical-protein	gnl\|CDD\|378823	pfam12161, HsdM_N, HsdM N-terminal domain. This domain is found at the N-terminus of the methylase subunit of Type I DNA methyltransferases. This domain family is found in bacteria and archaea, and is typically between 123 and 138 amino acids in length. The family is found in association with pfam02384. Mutations in this region of EcoKI methyltransferase abolish the normally strong preference of this system for methylating hemimethylated substrate. The structure of this domain has been shown to be all alpha-helical.	1.08179e-05
NZ_CP011456.1\|WP_053540474.1\|4708164_4709034_+\|lipoyl-synthase	gnl\|CDD\|235493	PRK05481, PRK05481, lipoyl synthase; Provisional.	0
NZ_CP011456.1\|WP_053540477.1\|4717738_4718122_-\|GxxExxY-protein	gnl\|CDD\|275083	TIGR04256, conserved_hypothetical_protein, GxxExxY protein. Members of this protein family average about 130 residues in length and include an almost perfectly conserved motif GxxExxY. Members occur in a wide range of prokaryotes, including Proteobacteria, Perrucomicrobia, Cyanobacteria, Bacteriodetes, Archaea, etc.	3.84024e-51
NZ_CP011456.1\|WP_039203605.1\|4710581_4711814_+\|RNA-polymerase-sigma-factor-SigC	gnl\|CDD\|236067	PRK07598, PRK07598, RNA polymerase sigma factor SigC; Validated.	0
NZ_CP011456.1\|WP_053540466.1\|4697840_4698302_-\|PIN-domain-containing-protein	gnl\|CDD\|350256	cd18689, PIN_VapC-like, uncharacterized subfamily of the VapC-like nuclease family of the PIN domain superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include FitB toxin of the FitAB TA system, eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The PIN domain belongs to a large nuclease superfamily. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	2.39236e-09
NZ_CP011456.1\|WP_053540467.1\|4698291_4698567_-\|DUF2281-domain-containing-protein	gnl\|CDD\|378366	pfam10047, DUF2281, Protein of unknown function (DUF2281). Members of this family of hypothetical bacterial proteins have no known function.	9.23342e-06
NZ_CP011456.1\|WP_053540468.1\|4700557_4700956_-\|hypothetical-protein	gnl\|CDD\|379367	pfam13784, Fic_N, Fic/DOC family N-terminal. This domain is found at the N-terminus of the Fic/DOC family, pfam02661.	7.85595e-35
NZ_CP011456.1\|WP_027404555.1\|4712124_4712580_+\|transcriptional-repressor	gnl\|CDD\|366663	pfam01475, FUR, Ferric uptake regulator family. This family includes metal ion uptake regulator proteins, that bind to the operator DNA and controls transcription of metal ion-responsive genes. This family is also known as the FUR family.	3.29555e-47
NZ_CP011456.1\|WP_053540476.1\|4713784_4717519_-\|cobaltochelatase-subunit-CobN	gnl\|CDD\|235663	PRK05989, cobN, cobaltochelatase subunit CobN; Reviewed.	0

>NZ_CP011456.1|WP_053540473.1|4705470_4707369_+|hypothetical-protein
MSQITIQCRLVASESTRQQLWQLTAEKNTPLINELLSQIGKHPEFETWRQQGKHPTGIVKELCEPLKTDPRFIGQPARFYTSATASVNYIYKSWFALMKRFQSQLDGKLRWLEMLNSDTELVEASGVSLDILQTKSAEILAQFAPQNPAETQPAKGKKGKKSPNSDSDRNLSKNLFDGYSNTEDNLTRCAISYLLKNGCKISNKAENTDKFAQRRHKVEIQIQRLTEKLAARIPKGRDLTDTIRLETLFNATQTVPENETEAKFWQNILLRKSSQVPFPVAYETNEDMTWLKNQFGRICVKFNGLSEHTFQIYCDSRQLHWFQRFLEDQQIKKDSKNQHSSALFTLRSGRISWQEEEDKGEPWDVNHLTLYCSVYTRLWTEEGTNLVKEEKAEEIAKTITQTKAKGDLNDKQQAHLKRKNSSLARINNPFPRPSQPLYKGQSHILVGVSLGLENPATIAVVDGTTGKVLTYRNIKQLLGENYKLLNRQQQQKHLLCHQRHIAQRMSAPNQFGDSELGEYIDRLLAKEIIALAQTYKAGSIVIPKLGDMREQIQSEIQSKAEQKSDIIEVQKKYAKQYRVSVHQWSYGRLIANIQSQANKAGIAIEEGKQPIRASPQEKAKELAISAYQSRKA
>NZ_CP011456.1|WP_053540472.1|4704976_4705402_-|MerR-family-transcriptional-regulator
MQEKFFTSKEAAQITGCTLRQIQYWREKGIVVPVIGDTGTGRSIYYSRSNLVELAALVYWLSTGISFDIACETLKQLKEQEPELFISGQGKRFMLLLSQDDSLSLVEFDRKRAIASLDEGKAVIPVWLDVIYQGLASKLPR
>NZ_CP011456.1|WP_053540471.1|4703467_4704763_-|hypothetical-protein
MTTEVAIINKEAIALAADSAVTVGISDGTKIYNSANKLFALSRVCPVGIMVYGNAQLTGVPWESLIKVYRQKLGNLSFPELQDYCNDFIDFINKHIKFFPDDYQTESVISILSDTYKHLQQEISYAVEQAFSNDIQTKISEELTNKIASEVIEKAATNLENLDNISHFSESFIKEKTVEFNPLFHKVIDHVFSEFNVTTNIKNNLLTIAEYSLFKKTFSSLVSGIVIAGFGEEEIFPSLHTYDIECVFGNQLKYRHNEDKSHAIGNYPAIIPFAQEDMISTFIAGIDPTLENFSIHALEEILQKYFETIIDQAKESDSSEQPDFINQINKHFNQTKQSLLEKYNEKMIEFRREYHINPILDTVSILPKDELAAMAEALVSLTSLKRRVTTDAETVGGPTDVALISKGDGFIWIKRKHYFSAELNRDFFVRK
>NZ_CP011456.1|WP_053540470.1|4703217_4703427_-|hypothetical-protein
MSGKNHIQSEQLDTQTNFYSSFEEWQSKTFPKLAQKGKRKLIEKKPEFLGKLAGNEIMKEIHSELLNRA
>NZ_CP011456.1|WP_053540469.1|4701030_4702554_-|hypothetical-protein
MRINSLDDLDRLESKIGQHLRKFKLGDILHSLHSKGEQIEPFIIAELVLFAIRYCSPSKKNIQLKKNIPSKQLTYLCNLVGQYLITDPIIFDKTLQDEFTQSNPIFTFLRIANKQFPFRVYPYSQFSRPISIYYEIPIALNVNQENPKSFDMIQEFQNLNGVSIPEFTNFLFVLLSYLKAYSTFSLDDIVRQARSNGINIPDDKCISIIMSQLAGDQNKLINLYQKRQTKDRRFKMYDISPFFEFPVVYPCTNRGFHDFGNDIISSPIPDLIARRNSLGIYYQLFNNFTTKFSTYFGHVFAKYVETVLKNSITSETLIDIDSELDESYRGKKPDYALIDGNLVILFECKAIKLRKDAKTMATEEEINKSLKEVIDGIQQIDEFIKNCQAKLPNLQRFDKYTIFKPVLITLEEIYLINDYFFRDYINKFLKEKGVSCFDWQILSIGELEELQPHLSQGIHLSQVLQDLEQKTFNDVLEDLSAKTQKTYKDSFLYPKQEELYQRLGIPD
>NZ_CP011456.1|WP_053540468.1|4700557_4700956_-|hypothetical-protein
MNPEDFQNTPTGRLVQIEEGKNPCYAFVPNPLPPIIELDIEIWRTLSDADRALGELAGLGRTMPNPTLLIRPFIRREAVLSSRIEGTQTNITNLYAYETGQLSLPGVVPPAPEGDAQEVLNYVRTLEYGLDG
>NZ_CP011456.1|WP_081424391.1|4699682_4700321_+|helix-turn-helix-domain-containing-protein
MTYGERQREVAAKLGKSVRTVRRLVKKWEEQGLAGLQTTQRADKGKHREEFLARAYAQDLETEELSLDEAKAMSRRIRQAGKEISKAAGVGGAIARWEKFRFNPPPSGQQLEALAKVVGVDADRLEQMLAPAGVGMNLEPIRLCAACYVDSPCHRIEWQFKVTQGCQHHHLSLLSECPNCGARFKVPALWVDGWCQRCFTTFGEMVEHQKNI
>NZ_CP011456.1|WP_053540467.1|4698291_4698567_-|DUF2281-domain-containing-protein
MTQAVEKQESILDRVQNLTPEQQEEVLNFIDFLQFKRQKQDVEPKKRRKWGDIKGKAPYRLVGEDAQIWVSRNRREETENRELHLRSNYED
>NZ_CP011456.1|WP_053540466.1|4697840_4698302_-|PIN-domain-containing-protein
MKIEDYLIQGKKLFLDTAPVIYYVENNPQYQSLVNYVFENLDSGLLSAVTSPITLSECLVYPYRLGLTELKEDFIDLIVSGVNVEFIQIDELIAKQASQLRAKYNLALLDSLQISVAIVAKCDVFLTNDIQLKRVTELPILVLSDFLAGGKNG
>NZ_CP011456.1|WP_053540465.1|4697517_4697799_-|hypothetical-protein
MNHFQALQSIKFSELLMVMSFTPTCTRYYIPQQYNWEKIRFHPKEGLGEFITTAMRKIAGFNKNLSGILTLKDYNEKQHDQRVLDDDRLDYRI
>NZ_CP011456.1|WP_053540474.1|4708164_4709034_+|lipoyl-synthase
MTVKPDWLRVKAPQWERVGNVKEILRDLALNTVCEEASCPNIGECFNAGTATFLIMGPACTRACPYCDIDFEKKPQALDPTEPTRLAKAVERMQLNHVVITSVNRDDLPDGGASQFVHCINAIHEVSPHTTIEVLIPDLCGNWQALEIILQGKPEVINHNTETIPRLYRRVRPQGDYERTMELLQRSRQISPSTYTKSGIMVGLGETDAEIRQVMEDLRKVDCDILTIGQYLQPSQKHLQVSNFVTPEQFAAWQTFGEELGFLQVVSSPLTRSSYHAEQVRELMKRYPR
>NZ_CP011456.1|WP_053540475.1|4709061_4710033_+|NAD(P)H-dependent-glycerol-3-phosphate-dehydrogenase
MTNSKIQNLKSVVILGGGAWGTALAKLAAINGNQVHLWSRSDSQPLEKVLEDKNAQVILSAISMKGVRDVASMVQSCPLSSQTIFVTATKGLEPHTTSTPSQIWQAAFPNSPVVVLSGPNLSQEIAQELPAATVVASKNTNAAQTVQLVFSSSRFRVYTNPDPVGVELGGTLKNVIAIAAGVCDGLHLGTNAKAALVTRGLTEMVRIGQTLGAKTETFYGLSGLGDLLATCNSPLSRNYQVGYQLANGKTLPGVMANLPGTAEGVNTCRVLMEIAQQQGIAIPITEQVYQLLEGEVTPRLALDKLMLRDIKPEFDNFPTEQIW
>NZ_CP011456.1|WP_039203605.1|4710581_4711814_+|RNA-polymerase-sigma-factor-SigC
MPATSFYKNAAQEGQNPSSPLDIEINNDDLPDLDMAAVESDLALAAQTSRRSTDLVRLYLQEIGRVRLLGRDEEVAEAQKVQRYLRMRLLLGAAATEGDAVIAPYARLMEVQERLTSELGHRPSLERWATTAGINLPDLKPTLANGKRRWAEIANLTVEELEQVQTQGLQAKSHMIKANLRLVVSVAKKYQNRGLELLDLVQEGTLGLERAVEKFDPTKGYRFSTYAYWWIRQGITRAIATSSRTIRLPVHITEKLNKIKKAQRKIAQEKGRTPTLEDLAIELDMTAIQVREVLLRVPRSVSLETKVGKDKDTELGELLETDTITPEEMLMRESLHKDLHNLLDDLTSRERDVISMRFGLSDGHAYSLAEIGRALDLSRERVRQIESKALQKLRQPKRRNLVRDYLESLS
>NZ_CP011456.1|WP_081424290.1|4711767_4712097_-|hypothetical-protein
MENITNIWLDLQQSLLIENICLLPLASCLLPLASCLLPLASCLLPLASCLLPLASCLLPLASCLLPLASCLLPLASCLLPLASYLLPLASCLLPSNLTTLDSRGLGYDV
>NZ_CP011456.1|WP_027404555.1|4712124_4712580_+|transcriptional-repressor
MTVYTTGSLKAELNDRGWRLTPQRETILHIFQELPQGEHLSAEDLYHRLETDGEGISLSTIYRTLKLMARMGILRELELGEGHKHYEINQPYPHHHHHLICVRCNSTIEFKNDSVLKIGGKTAQKEGFHLLDCQMTIHAVCPKCQRALMPI
>NZ_CP011456.1|WP_039203603.1|4712787_4713765_-|cell-wall-binding-protein
MENLAYLHLAFANQDEETTELISLSSLFKTTAAPNWQLFSSSAWKYMIPLALTISILNSVSSVFALEKNDNAATVNSLQQNEISQIKTANNQVISTAPITPTISNNIISVNKKRKDPNLLSKGDEGADVKVLQERLKIAGFYYGNSTGIFGPITHEAVKRFQKAYQLTVDGVVGKSTLAKLPDVTDENQTTTSQKLDHPDILSLGDRGEAVRILQAQLITAGFLQNQPNGYYGSNTVDAVKRFQKQHKLEINGLAGQTTRSKLHSLVKNSAKSDFTTLEIQRRLQEKGFYKGQINGMMASDTKKAISRAQEFYGISLKDIKSGSF
>NZ_CP011456.1|WP_053540476.1|4713784_4717519_-|cobaltochelatase-subunit-CobN
MHRISATPGGLNQSEGLFFLEQTPAPFVLITAADTDIQTLAAVVTKLPSQFPEIRVANLLQLQQQISIDAYSEQVLESAQVIVLRLIGGSSYWAYGLEVVQEIVQRNGTTLIVMPGDDGLDFDLISKSTVSQEIVQKIWQYFQEGGTENFLNALQFIADTALLTAFNPPQPQPVPRVGLYERSQDVGAQGMRPVRSQPKVGILFYRAHYLAGNTKVIDALCNALIEKNLQPVPVFVSSLREPGVSSQLCELLAAKDDHSVSLLMNTTSFSLASLETETPQTELWEKLNVPVLQVILCASSVEQWESESQGLTPRDIAINVALPEVDGRIISRAVSFKTLQTRNNKLETDVVVYEPVSDRIQFVAQLAANWVRLRVKPPQERRIALILANYPNTNGRLANGVGLDTPASCVEILKALKLAGYELGTIPETGDELIQILTSSVTNDPEGKDWKPINQSLSAAEYQNYFSTLPINIQKQIIARWGQPILDAIQNWTISGIQFGNVFVGIQPSRGYDLDPSLNYHAPDLEPTHNYLAFYDWVRESFQADAIVHVGKHGNLEWLPGKSVALSNTCYPEIALGPMPHLYPFIVNDPGEGSQAKRRAQAVIIDHLTPPMTRAELYGPLQQVENLIDEYYEAESLDPSRLPTIRDRIQELVIKENLYKDLGITNPEDIANFETLILNSLDGYLCELKEAQIRDGLHIFGQCPQGTQLRDLIVAIARIPNRHSIGITRAIAKQWQIDIDPLTDNLSAPLSAPLRLCERLKSCHIIGDVVELLEIEAAHLVEEVISGRRPCAPTDWISDKLLPALQKTNQETTNLLRGLDGKYVPSGASGAPTRGRPEVLPTGKNFYAVDIRAIPTETAWDIGRKAAETLIETYTQEHGEYPQTLGLSVWGTATMRTGGDDIAEALALLGVQPVWDGAARRVVDFEILPLAIIGRPRVDVTLRISGFFRDAFPNLIALFDQAVKAVSALDEPPDQNPLADTVRQETAQWTQEGLSLEVAQERSQYRVFGSQPGAYGAGLQGLIASQNWENDQDLAQAYTNWSAYAYSSSEETGNKNAEAFEQRLKQMQIVLHNQDNREHDLLDSDDYYQFQGGLTAAVRSLQGKNPQTYFGDNSNTSQPKIRQLSAEIARVYRSRVVNPKWIAGVMRHGYKGAFEMAATVDFLFAYDATAQCVEDYMYQGVVEAYLEDATVCEFIHDKNPWALRDIAERLLEANQRGLWQDVNIQTLENLRNLVHQAEATIEEK
>NZ_CP011456.1|WP_053540477.1|4717738_4718122_-|GxxExxY-protein
MDLKYQDITKKIIGASFEVHKFLGNGFQEVIYQRALAYEFHQAGLTFAREIEQHIYYKNLPEPIGTRRADFVVEQKVLVELKAVIQLEDVHLAQALNYLKAYKLEVGLLINFGSKSLTFKRLVLSNK
>NZ_CP011456.1|WP_053540478.1|4718318_4718636_-|hypothetical-protein
MYPSHEQIEIDKLVYEVYGLNAEDIAEVENWYARRYPIQNYLKLKKPTCVNLNTMSESRIRWIKGLHGFLEVKRIKIREISAIRLIRVLTLNWIKRLHGLGCRFR
>NZ_CP011456.1|WP_053540479.1|4718963_4719467_-|hypothetical-protein
MSLAESEFVKSEKAGYSYAEKKITYGDIEQRWLIVQSQDRKKSDLKKLSKRIEKALTNTQSKLENLSQEKFACAADARKELTKISKEFKYHQVENIEVIEKSPKIKEENQLGKAINNPTMRWIFQCFQSVHLVTFQGKREFYNLTSEMKYILLFLPEACRNYYRYIS

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Crispr_ID: NZ_CP011456_41

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011456_41

4837576-4837675

TypeV

Consensus_repeat	Method
CCTCCTGATAGCGCAGCGTGGCGTTAGCCATACTCCT	CRISPRCasFinder

1 spacers

cas14k

The CRISPR arrays of NZ_CP011456_41

>merge|NZ_CP011456|41|4837576-4837675|CRISPRCasFinder
CCTCCTGATAGCGCAGCGTGGCGTTAGCCATACTCCTGAATGGGCGCAGTCCCTGCGCCCCTACCTCCTGATAGCGCAGCGTGGCGTTAGCCATACTCCT

>NZ_CP011456|41|40|4837576-4837675|CRISPRCasFinder
CCTCCTGATAGCGCAGCGTGGCGTTAGCCATACTCCT	GAATGGGCGCAGTCCCTGCGCCCCTA
CCTCCTGATAGCGCAGCGTGGCGTTAGCCATACTCCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011456.1\|WP_053540562.1\|4847636_4849727_-\|protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP011456.1\|WP_053540560.1\|4846712_4847060_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376074
NZ_CP011456.1\|WP_053540561.1\|4847094_4847454_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053540549.1\|4825460_4826663_+\|phosphoglycerate-kinase	unknown	unknown	gnl\|CDD\|234613
NZ_CP011456.1\|WP_081424300.1\|4849716_4849908_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053540559.1\|4845676_4845916_+\|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|181058
NZ_CP011456.1\|WP_053540564.1\|4852030_4853533_+\|phenylacetate--CoA-ligase-family-protein	unknown	unknown	gnl\|CDD\|224458
NZ_CP011456.1\|WP_053540558.1\|4839225_4840563_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|284995
NZ_CP011456.1\|WP_053540565.1\|4853694_4854627_-\|cobalamin-binding-protein	unknown	unknown	gnl\|CDD\|238564
NZ_CP011456.1\|WP_053540557.1\|4838504_4838708_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_027404639.1\|4824964_4825372_-\|universal-stress-protein	unknown	unknown	gnl\|CDD\|366180
NZ_CP011456.1\|WP_053540556.1\|4835077_4836115_-\|pyruvate-dehydrogenase-(acetyl-transferring)-E1-component-subunit-alpha	unknown	unknown	gnl\|CDD\|177069
NZ_CP011456.1\|WP_081424299.1\|4827361_4827529_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|226984
NZ_CP011456.1\|WP_039199284.1\|4836545_4837328_-\|twin-arginine-translocase-subunit-TatC	unknown	unknown	gnl\|CDD\|177084
NZ_CP011456.1\|WP_039199279.1\|4830128_4830371_+\|YgiT-type-zinc-finger-protein	unknown	unknown	gnl\|CDD\|274806
NZ_CP011456.1\|WP_053540552.1\|4830599_4831469_-\|aldose-epimerase	unknown	unknown	gnl\|CDD\|185702
NZ_CP011456.1\|WP_053540551.1\|4828416_4829799_+\|PP2C-family-protein-serine/threonine-phosphatase	unknown	unknown	gnl\|CDD\|225118
NZ_CP011456.1\|WP_053540563.1\|4849842_4851552_-\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP011456.1\|WP_053540555.1\|4833550_4834774_-\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	cas14k	-	gnl\|CDD\|366606
NZ_CP011456.1\|WP_053540550.1\|4826737_4827322_+\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|99749

Protein	Function_ID	Function_description	E-value
NZ_CP011456.1\|WP_053540562.1\|4847636_4849727_-\|protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	8.62505e-56
NZ_CP011456.1\|WP_053540560.1\|4846712_4847060_+\|hypothetical-protein	gnl\|CDD\|376074	pfam18648, ADPRTs_Tse2, Tse2 ADP-ribosyltransferase toxins. Tse2 from P. aeruginosa has structural features similar to ADP-ribosylating toxins. It is a cytoactive toxin secreted by a type six secretion apparatus of Pseudomonas aeruginosa and found mostly in gamma proteobacteria. It naturally attacks a target in the cytoplasm of bacterial cells. Structural analysis shows similarity between Tse2 and nicotinamide adenine dinucleotide (NAD)-dependent enzymes from bacteria, notably the mono-ADP-ribosyltransferase toxins (ADPRTs). Furthermore, it revealed that the Tse2 active site is occluded upon binding the cognate immunity protein Tsi2. The abrogation of toxicity for the R14A, S80A, and H122A mutant Tse2 proteins indicates the importance of these amino acids in the mechanism of Tse2 toxicity and, given their conservation with NAD-reactive enzymes, also supports their assignment as being involved in a catalytic reaction.	0.000548871
NZ_CP011456.1\|WP_053540565.1\|4853694_4854627_-\|cobalamin-binding-protein	gnl\|CDD\|238564	cd01144, BtuF, Cobalamin binding protein BtuF. These proteins have been shown to function as initial receptors in ABC transport of vitamin B12 (cobalamin) in eubacterial and some archaeal species. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).	9.10494e-78
NZ_CP011456.1\|WP_053540549.1\|4825460_4826663_+\|phosphoglycerate-kinase	gnl\|CDD\|234613	PRK00073, pgk, phosphoglycerate kinase; Provisional.	0
NZ_CP011456.1\|WP_053540559.1\|4845676_4845916_+\|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein	gnl\|CDD\|181058	PRK07609, PRK07609, CDP-6-deoxy-delta-3,4-glucoseen reductase; Validated.	1.16769e-10
NZ_CP011456.1\|WP_053540564.1\|4852030_4853533_+\|phenylacetate--CoA-ligase-family-protein	gnl\|CDD\|224458	COG1541, PaaK, Coenzyme F390 synthetase [Coenzyme metabolism].	2.21496e-76
NZ_CP011456.1\|WP_053540558.1\|4839225_4840563_+\|AAA-family-ATPase	gnl\|CDD\|284995	pfam07693, KAP_NTPase, KAP family P-loop domain. The KAP (after Kidins220/ARMS and PifA) family of predicted NTPases are sporadically distributed across a wide phylogenetic range in bacteria and in animals. Many of the prokaryotic KAP NTPases are encoded in plasmids and tend to undergo disruption to form pseudogenes. A unique feature of all eukaryotic and certain bacterial KAP NTPases is the presence of two or four transmembrane helices inserted into the P-loop NTPase domain. These transmembrane helices anchor KAP NTPases in the membrane such that the P-loop domain is located on the intracellular side.	0.0019252
NZ_CP011456.1\|WP_027404639.1\|4824964_4825372_-\|universal-stress-protein	gnl\|CDD\|366180	pfam00582, Usp, Universal stress protein family. The universal stress protein UspA is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. UspA enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae UspA reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, though UspA lacks ATP-binding activity.	4.98445e-25
NZ_CP011456.1\|WP_053540556.1\|4835077_4836115_-\|pyruvate-dehydrogenase-(acetyl-transferring)-E1-component-subunit-alpha	gnl\|CDD\|177069	CHL00149, odpA, pyruvate dehydrogenase E1 component alpha subunit; Reviewed.	0
NZ_CP011456.1\|WP_081424299.1\|4827361_4827529_+\|AAA-family-ATPase	gnl\|CDD\|226984	COG4637, COG4637, Predicted ATPase [General function prediction only].	1.86473e-14
NZ_CP011456.1\|WP_039199284.1\|4836545_4837328_-\|twin-arginine-translocase-subunit-TatC	gnl\|CDD\|177084	CHL00182, tatC, Sec-independent translocase component C; Provisional.	2.33665e-94
NZ_CP011456.1\|WP_039199279.1\|4830128_4830371_+\|YgiT-type-zinc-finger-protein	gnl\|CDD\|274806	TIGR03831, hypothetical_protein, YgiT-type zinc finger domain. This domain model describes a small domain with two copies of a putative zinc-binding motif CXXC (usually CXXCG). Most member proteins consist largely of this domain or else carry an additional C-terminal helix-turn-helix domain, resembling that of the phage protein Cro and modeled by pfam01381.	7.69726e-06
NZ_CP011456.1\|WP_053540552.1\|4830599_4831469_-\|aldose-epimerase	gnl\|CDD\|185702	cd09025, Aldose_epim_Slr1438, Aldose 1-epimerase, similar to Synechocystis Slr1438. Proteins similar to Synechocystis Slr1438 are uncharacterized members of aldose-1-epimerase superfamily. Aldose 1-epimerases or mutarotases are key enzymes of carbohydrate metabolism, catalyzing the interconversion of the alpha- and beta-anomers of hexose sugars such as glucose and galactose. This interconversion is an important step that allows anomer specific metabolic conversion of sugars. Studies of the catalytic mechanism of the best known member of the family, galactose mutarotase, have shown a glutamate and a histidine residue to be critical for catalysis; the glutamate serves as the active site base to initiate the reaction by removing the proton from the C-1 hydroxyl group of the sugar substrate, and the histidine as the active site acid to protonate the C-5 ring oxygen.	5.16878e-143
NZ_CP011456.1\|WP_053540551.1\|4828416_4829799_+\|PP2C-family-protein-serine/threonine-phosphatase	gnl\|CDD\|225118	COG2208, RsbU, Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription].	6.20036e-103
NZ_CP011456.1\|WP_053540563.1\|4849842_4851552_-\|serine/threonine-protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	2.34257e-56
NZ_CP011456.1\|WP_053540555.1\|4833550_4834774_-\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	gnl\|CDD\|366606	pfam01385, OrfB_IS605, Probable transposase. This family includes IS891, IS1136 and IS1341. DUF1225, pfam06774, has now been merged into this family.	1.50027e-16
NZ_CP011456.1\|WP_053540550.1\|4826737_4827322_+\|Uma2-family-endonuclease	gnl\|CDD\|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	5.39019e-33

>NZ_CP011456.1|WP_039199284.1|4836545_4837328_-|twin-arginine-translocase-subunit-TatC
MTSSQDVDTIKSPNSDPEPSISPLDELPGEVEMSIFDHLEELRQRIFYSLIVVAVGIIGCFIVVKPLVQLLEIPAHGVKFLQLAPGEFFFVSMKVAAYGGLILTTPFILYQIIQFVLPGLTVRERRLVIPVVLGSSILFVCGLIFAYIALIPAALQFFINYGADVVEQLWSIDKYFDFVLLLLFTTGLAFQVPVIQILLATLGIVSSKIMLKGWRYVIMAAVVLGAILTPSTDPLTQSLLAGAVLGLYFGGIGLVKLTGK
>NZ_CP011456.1|WP_053540556.1|4835077_4836115_-|pyruvate-dehydrogenase-(acetyl-transferring)-E1-component-subunit-alpha
MAQERTLPTFNTATVQITKEEGLGLYEDMTLGRLFEDKCAEMYYRGKMFGFVHLYNGQEAVCSGIIKGAMRPGEDFVSSTYRDHVHALSAGVPAREVMAELFGKATGCSKGRGGSMHMFSAEHRLLGGYAFVAEGIPVAAGAAFQSKYRREVLGDKTADQVTACFFGDGAANNGQFFETLNMAALWKLPILFVVENNKWAIGMSHERATSQPEIYKKASVFNMVGVEVDGMDVLAVRQVAQEAVARARAGEGPTLIEALTYRFRGHSLADPDEMRSKEEKEFWFARDPIKKLAGYLVEQNLATEAELKDIEKKIQAVIEDAVKFAQSSPEPDPSELYRFIFAEDV
>NZ_CP011456.1|WP_053540555.1|4833550_4834774_-|IS200/IS605-family-element-transposase-accessory-protein-TnpB
MQLVEKHVISKQHKFWKECDYLALQSKHLYNAATYIQRQYFFETNTYYNSIDIYHQTKNIEAYRYLPTKVSKQIVRRVSEAWKGWLAALKDWAKHQGKYLGQPKMPRYKHKERGRNIVIYPIDAISKPALTKGIVRLSQSNIQIPTIAGNVDQVRIVPKLNYYVIEVVYTVDEPVKSTGKYSAGIDLGLNNLMAITSNHSGIKPLLINGRPLKSINQFFNKRVAKAQSVEAWRQVKELNSKRDRRVDNYLHTVSRRVIDWCQLNDISQLIIGNNLGWKQDINIGKKNNQQFTKIPHAKLISLLSYKAKLAGIEVVITEESYTSIASALDGDNLPVYQDKSDSKPTFSGKRIKRGLYKTSSGKIINADTNGSMNIARKVIPNFMNGIEGLPFIPVVLGLWSKIANVVV
>NZ_CP011456.1|WP_053540552.1|4830599_4831469_-|aldose-epimerase
MFTIDIQEQQYKTYILSDKTAGTQIEVVPERGGIITRWLVQGQEIFYLDAERFTNPDLSVRGGNPILFPLCGNLPDNTYSVDGKEYTIKQHGFARELPWTAIAQNTEGKASLTVVLSSNEETKAVYPFDFQLAFTYELQGNTLVVRQEYKNLSSTPMPFSAGFHPYFLCGDKNQLEVELPSGEYQDNKTKEFHAFNGKFDFNQDEIDFAFGGLTSKSATVTDNSRRLKLTLDYDDFTTWLVFWTVKGKDFYCLEPWSATRNAFNTGENLTMLAPGASCTASFRLTANFF
>NZ_CP011456.1|WP_039199279.1|4830128_4830371_+|YgiT-type-zinc-finger-protein
MKTQKCPTCQGELETKQIEKMLKGGNNTAVIHVEAEVCSKCGEKLYKPDVVNQFTQIRAKLRNQETEDFQVIGQSFRVSV
>NZ_CP011456.1|WP_053540551.1|4828416_4829799_+|PP2C-family-protein-serine/threonine-phosphatase
MSQFPPHSTDSNSSTTDVTPVVALKELVSRLHREQNKIQDLLSSLGFALRSFNNLNQFLELIPLMATRVTDAEGSALFLYKPNGQIRLEQLHWQDTQQRKIIRKALETASSQITLLSNSGPAAISTGILDDQMHAVLGPDVQIFGTAILVKHTERGWLYVLSRDPEYSWTETRQKLVRLVADQTAVAIDNDELSVELRKKERLDQELEIGAEIQRRLLPRQCPNIPGLSIAARCKPANQVGGDYYDFIPTNQNQLKSKPQASPENASWGLVIGDVMGKGVPAGLIMTMLRGMLRGEVLHGNSPAGILQNLNRVMYADLENSHRFVTMFYSEYDPQTRILSYSNAAHNPPLWWHAATKTVSQLDTLGMLIGLDANSEYENAQAQLEVGDTVIYYTDGLTDAAAAGGDRFDEDNFVTSFRTACKYCNSPQEIVEYLFDQVEQFIGSDKRNTDDMTLVVMQIV
>NZ_CP011456.1|WP_081424299.1|4827361_4827529_+|AAA-family-ATPase
MKIESIHLKNFKAFKNVEIKKIPKMCAFVGANGTGKTTIFNVFSFLKDALGNTKK
>NZ_CP011456.1|WP_053540550.1|4826737_4827322_+|Uma2-family-endonuclease
MQVQTRKHIYTPEEYLELEETALYKSEYRDGEIIPMTGGTGNHNKITLAIAAILLYAMRRKKYEVFMGDMRLWIPQFKEYTYPDVIVTDGKASYTGKNNTTVTNPLLIVEVLSKSTKNYDQGEKFTFYRSIPQFKEYVLVEQNQYQVMHYSKTNEGEWIFREYKCENDIVKLQHLDFEISLIDIYQDVNFEDRE
>NZ_CP011456.1|WP_053540549.1|4825460_4826663_+|phosphoglycerate-kinase
MSKKSLASLSAADISGKRALVRVDFNVPVDDQGNITDDTRIRAALPTIQDLTQKGAKVILASHFGRPKGVDEKLRLTPVAKRLSELLGQEVVKTDDCIGDDVAAKVGALANGQVLLLENVRFYKEEEKNDPAFAEKLAANADFYVNDAFGTAHRAHASTEGVTKFLSPSVAGYLVEKELQYLQSAIEVPQRPLAAIIGGSKVSSKIGVIETLLEKCDKLIIGGGMIFTFYKARGLSVGKSLVEEDKLELAKSLEAKAKERGVALLLPTDIVSADKFAPDANATTVSIENIPADGMGLDIGPDSIKVFQAALADCKTVIWNGPMGVFEFDKFAAGTEAIAHTLAEIGKTGATTIIGGGDSVAAVEKVGLADQMSHISTGGGASLELLEGKILPGIAALDEA
>NZ_CP011456.1|WP_027404639.1|4824964_4825372_-|universal-stress-protein
MFKTVLFPIDQSREAREAADIVANIVQTYGSRLILLSVVEEPDSEAPATSPMVSPEAVAKLLENAQALFSGQGIIAELLERQGKPAFTICDVADEVEASLIIMGCRGIGLTDEGATDSVTARVINLSPCPVLIVP
>NZ_CP011456.1|WP_053540557.1|4838504_4838708_+|hypothetical-protein
MKKTIGLGLMVLSVYLYNSSACFAGNKLSIDNAGVRIGNYSQSQLVVGMSARDEQSGDCIRKGKCKD
>NZ_CP011456.1|WP_053540558.1|4839225_4840563_+|AAA-family-ATPase
MLFNVERFYQACNPSRPLMIENVDDRMYYIDFTSVRGGKIIEALLRTITKISPNTPTCQLFTGHLGCGKSTELLKLKAELEAQDFHVVYFESTHVLEMVDIDITDILLAIAGLVSKNLEAMKLRVQPSYFTKLFGELVDFLQTPLDLGVEAELSVGIAKITAKTKESPQLRRRLRDYLEPRTENILQSINKELLDRANLELKARGKKGLVVIVDNLDRVAVRPLPSGRSLPEYLFIDRGEQLRKLHCHVVYTIPLALTFSNESAQLQHRLGGGVAPKVLPMIPVRQRCGEIHTEGLGLMRQMVLARAFPDMLPGDRLNLVTQLFDNLETLDRLCLISGGHVRDLLGLLFDCLREQDPPFDRQCVELVIQRQRDYRANAIDMEESELILQVLQDQRVRGNVEYDILLRSLFIFEYRDHQGVWFAVNPVLAEMEKFKLCLKDSKQRI
>NZ_CP011456.1|WP_053540559.1|4845676_4845916_+|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein
MTMQINFLPDDITVNAEVGEPLLDVAERAGVSIPTGCLMGTCHACTLELDDGEVIRACITAVPPGKEKLTVHLFSDPTW
>NZ_CP011456.1|WP_053540560.1|4846712_4847060_+|hypothetical-protein
MNNTPIILYRQGNANSPRMDNVRPDKDIACYDQDGEVWVMTTLADGESTGGISTFANPGYGKNWWQLQAGTKIPEQLELVNDYDNHWLWKPIQDMPLEDYKKELQQIGTYFSKVN
>NZ_CP011456.1|WP_053540561.1|4847094_4847454_+|hypothetical-protein
MDLSFKDIKFMIEAVDNLMVKYQERINQIEDSDEYEDEVSDLGNDIMFLSSLRKKIDDSLNDSVSPQVNTSIFTPLSIGRRKYSKEEILKADSKQLEAIIKASTNHPTAHIKSGFDEDK
>NZ_CP011456.1|WP_053540562.1|4847636_4849727_-|protein-kinase
MTNIYCSQGHQNPSGSRFCLQCGDRIGSVPISGNQGIQAGQTLGDRYVIIRQIGQGGFGKTYLAEDLNRFREACVLKEFFPQVQTPYIVQKAEELFQREASVLYKLQHPQIPRFRELLRINLQGKESLFLVQDYIDGETYNSLLNSRQKQGLKFTEIEIRQLLQQILPVLEYIHALGVIHRDISPDNLMLRSSDKLPVLIDFGGVKQVAATVASQYYQTGGIASPTNGTLLGKIGFAPPEQMQTGMVSTHSDLYALAVTTLVLLTGKQPQELIDTYNCSWQWRREISLSSALGQIIDKMLSPIASDAYGGLHQRYQTARQLLQVLNPQSVSYPQTQPPTSATVAISPPKIPVPEPVMIPTPPQPGIWTGKNVLILVFFLTIGSYLYWQKLKTPTNNLQGNNPIILPSPHSTETAKTEVTFSPEERRRKQKLSILREELDINYQFYVRLVNQLFREKYPNLKGRILSDNPEDENLRAEWDKTAAEVLEKLTAITADSRRQLGNYTGDERATWKAQINQINVGSRSLYDLGDAAFFSEFPEQKSKNFIKQPIGQVWYAFVNDQLNAILDKSILERIVFPEGATGKTVSGTLQPGKGKVFIAGLAKDQNMEVKLEANSKVLLSIYSPSGKNPLLQDSQTRTISATLPEKGFYEFVVVSTASESVDYQLTLTAENPPEPEPTEEPTEEPTLTETPTPENN
>NZ_CP011456.1|WP_081424300.1|4849716_4849908_+|hypothetical-protein
MLVIGHWSLVIGHWSLVIGHWSLVIGHWSVLTNYLLPITHYPLLIFYFIRCDRIPDLQKSFLI
>NZ_CP011456.1|WP_053540563.1|4849842_4851552_-|serine/threonine-protein-kinase
MQIYCSQQHINNGGHRFCTQCGEALPLTVGQVIDNRYEIARILGQGGFGRSYLAIDRQKSRKTCVLKEFAPNVVKPQELQKAKELFEREASVLKKIQHPQIPRFHASFSAKIGTKDFFFLVQDYIEGDNYDQLFEQRRGQGQSFSEEEVINLLHNVLPVLTYIHSLDIVHRDISPDNLILRQSDNLPVLIDFGGVKQLPASQGFWRTQLAVNATLLGKKGYAPEEQLLQGKVYKNSDFYALGVTALVLMTGKEPHLLYDSFNGVWLWGKEIKVSPKLETVLKKMLAYKPSDRYQKAEQVIKDLPLPSTSSTPQIMQTSNNNPNPYITKLKTQVVAPGIKRVRSIHGGVHNQTSLFVQKIPMPKWLRPFMVSFIMTTVMLSTGAGMFALGNFAVKGITSIKVPQVELPKIPSKHDSKDEKNQTNRTIQQVFSRLQQLEISPAFFTNTVNEVFYAEKPELNNRKLTQNPEDAALRSQWNAIANKLLNNLEKANLSEPARKKIGSYSQQDSQRWEQLAKAGKLGNYKSFQDLRADTYQTFDPLFPGQERGKLNQKTFLQIWYAIASDKVENK
>NZ_CP011456.1|WP_053540564.1|4852030_4853533_+|phenylacetate--CoA-ligase-family-protein
MKPQISTPRAILGLEYFISTPLTDKLKQHLNIDSQEIALRLFQDVAASVPAYQAFLAERGINPQNIQTLADFQNLPKINKENYISRYSLPQLCNNGKVGSCDMIAASSGSTGKPTFWPRFITDELEIATRFEQIFHDSFHADTKPSLAVICFTLGTWVGGMFTTNCCRHLAAKGYPITVITPGNNKTEILRIVQELGGNFEQVVLLGYPPFLKDVIDTGIANGMQWGQYHIKLVMAGEVFSEEWRNLVGERIGSQNPYDDFASMYGTADAGVLGNETPLSICIRRFLAATPAAAKALFGESRLPTLVQYDPCSRFFEVEDGNLLFSGNNGVPLIRYSIFDQGGLITYTEMLEFLAEWGFNPITELKNHRGIHQLPFVYVFGRSNFTVSYFGANIYPENVTVGLEQPIIREWVTGKFVIQVKEDADKNRFLSVVVELAPGIENQEEKRLSITAAILAQLLRLNSEFANYVPLQYQTPVVELKPIGDTEYFPIGVKHRYSRS
>NZ_CP011456.1|WP_053540565.1|4853694_4854627_-|cobalamin-binding-protein
MIDTSNDIRIISLVPSATEIVAKLGLFNAMVGRSHECDYPPEIVNLPVCTQARLNGDANSHSIHKEADNLLQSALGIYKIKVDVLEKLHPTHIITQDQCDVCAVSLPEVEKAVAQLTHSSPHIISLQPNTLQDTWGDIERVSHAFGVDSVEILENLEARVRICKRRLQGLSTAELPKVVCIEWTDPLMTAANWVPELINLAGGRPLFSITGKPAAHVKWETLVDSNPDVIIFMPCGFDLQRTQQEAELLTQRPEWKKLHAAQTGRVFITDGNAYFNRPGPRLVDSVEILAEILHPDIFDYGYKGSAWQIL

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Crispr_ID: NZ_CP011456_42

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011456_42

4903287-4903379

Orphan

Consensus_repeat	Method
GGCGATAGCGAAGCGCGACCTAGGAATCGCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP011456_42

>merge|NZ_CP011456|42|4903287-4903379|CRISPRCasFinder
GGCGATAGCGAAGCGCGACCTAGGAATCGCTTCAATTATCTATCTGTTAAATATTTACTGAGGGCGATAGCGAAGCGCGACCTAGGAATCGCT

>NZ_CP011456|42|41|4903287-4903379|CRISPRCasFinder
GGCGATAGCGAAGCGCGACCTAGGAATCGCT	TCAATTATCTATCTGTTAAATATTTACTGAG
GGCGATAGCGAAGCGCGACCTAGGAATCGCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011456.1\|WP_053540599.1\|4911320_4911644_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053540587.1\|4886804_4887002_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_039203329.1\|4903625_4903907_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053540595.1\|4902671_4903247_+\|DUF4276-family-protein	unknown	unknown	gnl\|CDD\|379470
NZ_CP011456.1\|WP_039203355.1\|4904830_4905094_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_039203326.1\|4905285_4905696_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053540597.1\|4904424_4904844_-\|PIN-domain-containing-protein	unknown	unknown	gnl\|CDD\|350263
NZ_CP011456.1\|WP_053540601.1\|4912144_4912786_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053540589.1\|4893707_4894604_-\|lipoyl-synthase	unknown	unknown	gnl\|CDD\|237261
NZ_CP011456.1\|WP_053540598.1\|4910918_4911098_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053540596.1\|4903440_4903626_-\|type-II-toxin-antitoxin-system-HicA-family-toxin	unknown	unknown	gnl\|CDD\|377942
NZ_CP011456.1\|WP_053540593.1\|4900304_4900931_-\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|368559
NZ_CP011456.1\|WP_053540590.1\|4895500_4896073_+\|response-regulator	unknown	unknown	gnl\|CDD\|381085
NZ_CP011456.1\|WP_053540600.1\|4911621_4912092_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|350261
NZ_CP011456.1\|WP_039201322.1\|4892077_4892947_+\|branched-chain-amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|119324
NZ_CP011456.1\|WP_053540592.1\|4898507_4900070_-\|NAD(P)H-quinone-oxidoreductase-subunit-N	unknown	unknown	gnl\|CDD\|235044
NZ_CP011456.1\|WP_053540594.1\|4901443_4902679_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|379114
NZ_CP011456.1\|WP_028083170.1\|4892968_4893088_-\|phosphorylase	unknown	unknown	gnl\|CDD\|369686
NZ_CP011456.1\|WP_053540588.1\|4887050_4891742_+\|hybrid-sensor-histidine-kinase/response-regulator	unknown	unknown	gnl\|CDD\|223716
NZ_CP011456.1\|WP_053538715.1\|4908809_4910384_-\|DNA-polymerase	RT	pfam00078_RT_CAS-I:CAS-III	gnl\|CDD\|275209

Protein	Function_ID	Function_description	E-value
NZ_CP011456.1\|WP_053540597.1\|4904424_4904844_-\|PIN-domain-containing-protein	gnl\|CDD\|350263	cd18696, PIN_MtVapC26-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC26 and related proteins. Mycobacterium tuberculosis VapC26 cleaves 23S rRNA in the Sarcin-Ricin Loop, it is inhibited by the cognate VapB26 antitoxin. This subfamily belongs to the VapC (virulence-associated protein C)-like nuclease family of the PIN domain-like superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include FitB toxin of the FitAB TA system, eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The PIN domain belongs to a large nuclease superfamily. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	2.85178e-35
NZ_CP011456.1\|WP_053540595.1\|4902671_4903247_+\|DUF4276-family-protein	gnl\|CDD\|379470	pfam14103, DUF4276, Domain of unknown function (DUF4276). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and archaea. Proteins in this family are typically between 190 and 224 amino acids in length. There is a single completely conserved residue E that may be functionally important.	1.01669e-05
NZ_CP011456.1\|WP_053540600.1\|4911621_4912092_+\|hypothetical-protein	gnl\|CDD\|350261	cd18694, PIN_VapC-like, uncharacterized subfamily of the VapC-like nuclease family of the PIN domain superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include FitB toxin of the FitAB TA system, eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The PIN domain belongs to a large nuclease superfamily. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons. Matelska et al. recently classified PIN-like domains into distinct groups; this subgroup includes some sequences belonging to one of these, PIN_24.	1.043e-63
NZ_CP011456.1\|WP_053540589.1\|4893707_4894604_-\|lipoyl-synthase	gnl\|CDD\|237261	PRK12928, PRK12928, lipoyl synthase; Provisional.	0
NZ_CP011456.1\|WP_053540596.1\|4903440_4903626_-\|type-II-toxin-antitoxin-system-HicA-family-toxin	gnl\|CDD\|377942	pfam07927, HicA_toxin, HicA toxin of bacterial toxin-antitoxin,. HicA_toxin is a bacterial family of toxins that act as mRNA interferases. The antitoxin that neutralizes this is family HicB, pfam15919.	0.000132711
NZ_CP011456.1\|WP_053540593.1\|4900304_4900931_-\|Uma2-family-endonuclease	gnl\|CDD\|368559	pfam05685, Uma2, Putative restriction endonuclease. This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. A small number of member proteins also contain pfam02861 domains that are involved in protein interactions. Solutions of several structures for members of this family show that it is likely to be acting as an endonuclease.	4.06257e-25
NZ_CP011456.1\|WP_053540590.1\|4895500_4896073_+\|response-regulator	gnl\|CDD\|381085	cd00156, REC, phosphoacceptor receiver (REC) domain of response regulators (RRs) and pseudo response regulators (PRRs). Two-component systems (TCSs) involving a sensor and a response regulator are used by bacteria to adapt to changing environments. Processes regulated by two-component systems in bacteria include sporulation, pathogenicity, virulence, chemotaxis, and membrane transport. Response regulators (RRs) share the common phosphoacceptor REC domain and different effector/output domains such as DNA, RNA, ligand-binding, protein-binding, or enzymatic domains. Response regulators regulate transcription, post-transcription or post-translation, or have functions such as methylesterases, adenylate or diguanylate cyclase, c-di-GMP-specific phosphodiesterases, histidine kinases, serine/threonine protein kinases, and protein phosphatases, depending on their output domains. The function of some output domains are still unknown. TCSs are found in all three domains of life - bacteria, archaea, and eukaryotes, however, the presence and abundance of particular RRs vary between the lineages. Archaea encode very few RRs with DNA-binding output domains; most are stand-alone REC domains. Among eukaryotes, TCSs are found primarily in protozoa, fungi, algae, and green plants. REC domains function as phosphorylation-mediated switches within RRs, but some also transfer phosphoryl groups in multistep phosphorelays.	3.06331e-19
NZ_CP011456.1\|WP_039201322.1\|4892077_4892947_+\|branched-chain-amino-acid-ABC-transporter-permease	gnl\|CDD\|119324	cd06582, TM_PBP1_LivH_like, Transmembrane subunit (TM) of Escherichia coli LivH and related proteins. LivH is one of two TMs of the E. coli LIV-1/LS transporter, a Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporter involved in the uptake of branched-chain amino acids (AAs). These types of transporters generally bind type 1 PBPs. PBP-dependent ABC transporters consist of a PBP, two TMs, and two cytoplasmic ABCs, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP, which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. E. coli LivH forms a heterodimer with another TM, LivM, to generate the transmembrane pore. LivM is not included in this subgroup. The LIV-1/LS transporter is comprised of two TMs (LivM and LivH), two ABCs (LivG and LivF), and one of two alternative PBPs, LivJ (LIV-BP) or LivK (LS-BP). In addition to transporting branched-chain AAs including leucine, isoleucine and valine, the E. coli LIV-1/LS transporter is involved in the uptake of the aromatic AA, phenylalanine.	2.30453e-69
NZ_CP011456.1\|WP_053540592.1\|4898507_4900070_-\|NAD(P)H-quinone-oxidoreductase-subunit-N	gnl\|CDD\|235044	PRK02504, PRK02504, NAD(P)H-quinone oxidoreductase subunit N.	0
NZ_CP011456.1\|WP_053540594.1\|4901443_4902679_+\|ATP-binding-protein	gnl\|CDD\|379114	pfam13304, AAA_21, AAA domain, putative AbiEii toxin, Type IV TA system. Several members are annotated as being of the abortive phage resistance system, in which case the family would be acting as the toxin for a type IV toxin-antitoxin resistance system.	1.89742e-13
NZ_CP011456.1\|WP_028083170.1\|4892968_4893088_-\|phosphorylase	gnl\|CDD\|369686	pfam08078, PsaX, PsaX family. This family consists of the PsaX family of photosystem I (PSI) protein subunits. PSI is a large multi-subunit pigment protein complex embedded in the thylakoid membranes of green plants and cyanobacteria. PsaX is one of the 12 protein subunits found in PSI and these subunits are arranged as monomers or trimers within the membrane as shown by the structure of the trimeric complex from Synechococcus elongatus.	2.64732e-11
NZ_CP011456.1\|WP_053540588.1\|4887050_4891742_+\|hybrid-sensor-histidine-kinase/response-regulator	gnl\|CDD\|223716	COG0643, CheA, Chemotaxis protein histidine kinase and related kinases [Cell motility and secretion / Signal transduction mechanisms].	5.49795e-168
NZ_CP011456.1\|WP_053538715.1\|4908809_4910384_-\|DNA-polymerase	gnl\|CDD\|275209	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase. Members of this protein family are multifunctional proteins encoded in most examples of bacterial group II introns. These group II introns are mobile selfish genetic elements, often with multiple highly identical copies per genome. Member proteins have an N-terminal reverse transcriptase (RNA-directed DNA polymerase) domain (pfam00078) followed by an RNA-binding maturase domain (pfam08388). Some members of this family may have an additional C-terminal DNA endonuclease domain that this model does not cover. A region of the group II intron ribozyme structure should be detectable nearby on the genome by Rfam model RF00029. [Mobile and extrachromosomal element functions, Other].	3.36468e-100

>NZ_CP011456.1|WP_053540595.1|4902671_4903247_+|DUF4276-family-protein
MSNLKIALIAEDNTDCEAIRTIVHRVLGAEVTTKKWASKGCSSLTKKLRAKLKLLSTEGCNIFIVVHDLDRNPQNGSLNNERALRSKLEELSSEIESLKKHICIPIEELEAWFWSDPEVIKYLGGEKGKAHPNPHEIKSPKEKLIELSVGENRKPRYSTNMNVELAERLNLNICSDRCASFKNLLNFLRSL
>NZ_CP011456.1|WP_053540594.1|4901443_4902679_+|ATP-binding-protein
MSNPDSNTNQPRLLSFTLDGWSVLGSRVTVSLEDGVAVLVGRNGAGKSAILEGFEAISLCAIGRFNPLVYDGESFPKILEIEILTPTARRLEYRYEFTTLASSDDDLNFDDSDDSIDEKSEVSRFSWNDYCRYINEEEDHLWTTDNGVTTFHTGDSPIITVLGNTHSLRQSLPKTSPIKLPDEMLWVYSVLGGVRLLGKASIRQRTRRQPSQLRVSSKGISTRSFSLGDILARKILRLIGKDDLCELESICQRVGLGSKISEQKFILSRDSGEKIENEEEEYISSVLLDGVNIGLLSDGTLRVLSILIEIIASSPNTTTIIEEPETQIHPAMLAKLLNEIETYSFGENLILSTHSPQVVSWTSPDKIILVHRDNGQTFVRKLGDDQIHNVIEYLSEDGELGEWIYSGILDE
>NZ_CP011456.1|WP_053540593.1|4900304_4900931_-|Uma2-family-endonuclease
MTIATERQAQQQLLSFSDFIVRYGDSNRYELIDGEVFDLEPTGYHEEVSAFTTTKICAQIDAIGLNWFVLQRGLLRPSNLGMTAFRPDVMVVDRNELAKELLWNDQSILTLGSSIKFVMEVVSSNWQNDYARKVEDYAILGIPEYWIADYAGLGVTRHIGKPKQPTLSICTLVKGEYEIQQIRGNQPITSLTFPNFKLTAEQVLKAGR
>NZ_CP011456.1|WP_053540592.1|4898507_4900070_-|NAD(P)H-quinone-oxidoreductase-subunit-N
MDFANFASQLNAGTILPEGIVMITLLGVLIVDLILGRTSARWIAYLAIAGLTAAIIALYFQWDTTNPIAFTGSFNGDDLSIVFRGIIALSAMSTILMSIRYVEQSGTPLAEFIAILMTATLGGMFLSGANELVMIFISLEALSISSYLLTGYTKRDPRSNEAALKYLLIGASSTAVFLYGVSLLYGLSGGQTELSAIAQGIATANVGQSLGLVIALVFVIAGIGFKISAAPFHQWTPDVYEGAPTPVIAFLSVGSKAAGLALAIRLLTTVFPIVADEWRFVFTALAVLSMVLGNVVALAQTSMKRMLAYSSIAQAGFVMIGLIAGTDAGYSSMIFYLLVYLFMNLCGFSCVVLFSLRTGTDQISEYSGLYQKDPLLTLGLSISLLSLGGIPPLAGFFGKIYLFWAGWQAGLYWLVLLGLVTSVVSIYYYIRVVKMMVVKEPQEMSDVVKNYPQVRWDLPGLRPLQVGLIVTLIATTISGILSNPLFTLANNSVTNTPMLQAAKVASTQASVITNKELQEL
>NZ_CP011456.1|WP_053540590.1|4895500_4896073_+|response-regulator
MASNKILVIDDTTVVRVKVREMLPPGNFEVIEAKDGLEGYNLILKEKVSLIMLDFLLPKMSGWEVFQKIQAQPELRKIPLVIMSGRKEEVTEKFVEPFEYFEFLGKPFDQKQLVGAIKSAMLKSKKERLDLNIPPVNPANKQPAPVAINAVDSSAEIKLLNDKIIKMQGEIDNLKKQLNQVVTFIKQKIK
>NZ_CP011456.1|WP_053540589.1|4893707_4894604_-|lipoyl-synthase
MNSPQQVDIKSEIMTMPSWLRRPIGKASEISTVQRIIKQRQIHTICEEGRCPNRGECYAQKTATFLLMGPTCTRACAFCQVDKGHAPMALDEEEPQKVAESVRLLGLRYVVLTSVARDDLADGGAGHFVRTMETIRQMNPDTQIEVLTSDFWGGGGVAVQCHSLAMIIQAQPACFNHNVETVRRLTPTVRRGAKYDRSLAVLATVKELNDQLPTKSGVMVGHGETMEELIETMADLRSVKCDRLTIGQYMRPSLDHLPVKKYWTPAEFTELGNIAKEMGFNHVRSGPLVRSSYHAGEE
>NZ_CP011456.1|WP_028083170.1|4892968_4893088_-|phosphorylase
MTAKGKPAAKPSYAFRTGWALLLLAVNFLVAAYYFHIIE
>NZ_CP011456.1|WP_039201322.1|4892077_4892947_+|branched-chain-amino-acid-ABC-transporter-permease
MDITQFAQLIINGIAVGSIIALAAVGLTLTYGILRLSNFAHGDFLTLGAYLTLMVNAMGLNIWLSMIVATVGTVGGMLLAEKLLWSKMRSIRASSTTLIIISIGLALFLRNGIIFLWGGKNQNYNLPVIPALEFGTLKVPQNQLLVLGLAILAILSLHYLLQNTKIGKAMRAVADDLDLARVSGINVDRVILWTWVIAGTFTSLGGSMYGLITAVRPNMGWFLILPLFASVILGGIGNPYGAIAAAFIIGIAQEVSTPWLGSQYKQGIALLIMIVVLLIRPKGLFKGTI
>NZ_CP011456.1|WP_053540588.1|4887050_4891742_+|hybrid-sensor-histidine-kinase/response-regulator
MQPEQQQRILGYFLEEAREHLNTIEQGLLNLQGTLEDSEMINEVFRAAHSIKGGAAMLGLSSIQHTSHRLEDCFKILKEHPIQVDQRLESLLLDICDTLKALIDNLGNPFGLSEEKAQALMSKTEPVMQWLNEHIELLLKQGNNQVLNPSSASPTRLHIEPPVSPQIQNSPIPSKQNQDWTEFQAQVLQVLREMLQQFKKTNIETSRNNLQECCHQLVKIGRELNLSNWCNLCESAALAISNPDNSYLTLAKIIITEIKQAQELVLQHRDGEITISQQLENLFPLVQLELLEFAETETGETLFTDTTEINLEPNINGFTDPALFDHQSTVTEKSPEIGISELNTLADLFEGDTPDLENNWQQEEILEDITNYQLPIINSEVEENNHNLADLLFFEDDNIHKITANNHEDLSLLFDDSLLESGDIAETVSSQPIEPSNLLSNHTDLQFPSDDVLLELISISRQSRQPNSENETNSSNNLEELLTFTADDELIFTDETTESENTAIAEIATEPQINFDNSFLSANTDANFPVEVIPTNVKTSKIKPSAPESLSLDNLFTAVKPQPPLVNEIDDLFSTPEITTNLANSVDDPDNFWDDLGISDSENTSVISQDIAKELEESLFSASLEIGTKYQQLTTNNHVDKKGFNPTSQEEYFDLFFTSDSDTGAEAIDNLFDDFIDANSNNVSQSRELFLPEINSFSQPPEVTADQEIFEPVEDGNDDGLILFEEEITSSKSDTNLDFTSNFADFNLELDSILLTAITTDSAVVDETYSELELDNPLQSSSIDDFAAIEALLDEPVEDIVEASSIDDFAAIEALLSTALGEITNQESESIPGEDLAALEALLDEVGDKEAQIIIGQTPVIVRPVVTNSQNTFSSLGLEDEFSELEDLLEQADKTISGSSAASGKTSTSKIPIPRPTTRRTIREESMKIPVKQLDDMSNLVGELVVNRNTLEQDHERLRQSLDSLLVQVQHLSDVGVRMQEYYERSLLEASLLSSRRYREHDGPPSGNSHNRGFSEIEMDRFTPFHILAQEMIEFIVRVRESASDIDFVTEETEQVARQLRQATSQLQEGLTKARMVPFTQAVDRLRRGVRDNAIRYGKQVELVTEGVDTLVDKMILDRLTDPLTHMVNNAISHGIETPEVREAAGKSPVGIINIRALQQGNQTIISVSDDGAGIDHQKVKNKAVKKGILTPEQAKTMSRIDTYELLFLPSFSTADEVDDIKGRGVGMNVVHNDISEIRGTVGTDSTLGQGTIFTIRLPLTLSICKALFCICDRTRIAFPMDGVEDTLNIPSKNIQQDADGESFIVWREIILPFKPLKDILVFNRQLSRGNIYGTKKNDDMISVIVIRSGNTMIALQVDQVLSEQEIVIKQFEGPAPKPSGVAGATVLGDGMIMPIADVLEIIDIFQGKMSKHIGGNWQQTNSPSVNTISADKVETTVLIVDDSITVRELLSLTFSKAGYRVEQARDGQEAWDKLRSGLHCDIVFCDIEMPRCDGLELLSRMQKDGSFGNLPIAMLTSRGADKHRQMAIQLGASGYFTKPYLEEALLEAASRMLKGENVVVTA
>NZ_CP011456.1|WP_053540587.1|4886804_4887002_-|hypothetical-protein
MANKKVNRLVPQGGSQKSKVKTKTVSNGTELITQLIFLFPVKSSLFPLSTSEFNFVRLLIGFLTI
>NZ_CP011456.1|WP_053540596.1|4903440_4903626_-|type-II-toxin-antitoxin-system-HicA-family-toxin
MKRRDLLRHLSQHGCYLLREGSEHSIWENPLNGRRTAIPRHREIVDFTVFRICRQLEIPEP
>NZ_CP011456.1|WP_039203329.1|4903625_4903907_-|hypothetical-protein
MLTYKAMYKFLDKGVHGEVLDFPGAISWGEDLSIVRRSLASALVDMAEVYLSQGESLPLPNEQLTEPEADLEEPIYLIFSAANHVQVVPSFVA
>NZ_CP011456.1|WP_053540597.1|4904424_4904844_-|PIN-domain-containing-protein
MVIVDSGFWIALINRRDDYHVLAQEVLDTIDEPLVTTWCVITEACHILLKRTGTNAQQTFIHSLEIGAFEVFDLKVQDGKRISELMNQYISLPMDLADASLIILAEHLGHGRILSVDFRDFNTYRWKNRHPFENLMSIN
>NZ_CP011456.1|WP_039203355.1|4904830_4905094_-|hypothetical-protein
MRVNARLDSDRANKFNYIRQRTNQGVSDIMKVAIDLYYEKLHQESPVKPLQLLRESGLIGCAEGDSDLSVNYKQYLTESLNEKYGHR
>NZ_CP011456.1|WP_039203326.1|4905285_4905696_+|hypothetical-protein
MTDTIQLTSEQIAIYRSELADNSDFLAALDVIEEWDGDLADAAESIATRNGIEGVEDNADMRWFVIVLNKCRESICQQRYEIVREKIVPALIPTLTEMVAASFLCPPGIATLLSTPIAIYVQEEGMDKFCQISTDD
>NZ_CP011456.1|WP_053538715.1|4908809_4910384_-|DNA-polymerase
MIRHRENSSESWKTLPWKQFRRNLFRLQKRVYKAVQVGDKRKAKSLQKLILKSTAARLLAIRQVTQLNAGKKTAGIDGKTALSFEQRFELSEKLRTEGNDWKHQGLREIPIPKKDGKTRILKVPTIADRAYQCLVKYALEPAHEATFHARSYGFRTGRSAHDAQRYLYNNLNSKANGIDKRVIELDIEKCFDRINHTAIMDRLIAPYSIRQGIFRCLKAGVNPEFSEQGTPQGGVVSPLLANIALNGIESIHRYHRISSYRITDKTSNGDIVEPTIRYADDMVIILRPQDDATEILDKISQFLAERGMKVSEKKTKLTAATDGFDFLGWHFKVQKNGKFRCTPSVDNFKAFRKKVKFIVNNSNYGATTKAEKLAPVVRGWRNYHRFCKMDGSKFSLWHINHRAFKVFNKETKQNRHNSQELIKKAFPTVPYSENKHINVKGEKSPYDGDLTYWSERNSKLYDNNTSKALKRQSHKCGHCGLKMLSDEKVHLHHIDGNHQNWKTKNLLAIHESCHDYIHMSKSES
>NZ_CP011456.1|WP_053540598.1|4910918_4911098_-|hypothetical-protein
MDEARLQAYINLIEKLLACADVEELNNILQANQELIDPELLQVMENYATWLEQVRFVVS
>NZ_CP011456.1|WP_053540599.1|4911320_4911644_+|hypothetical-protein
MLEANVRDNQELSGLIQQANSKGEAIALVQEGQQKAVLLSLEMFQYLIGISNRREQLSNEGFATMSHQLFTKSGYDSTDKIMELIQDVKQEISTEREQRLNDSEIKF
>NZ_CP011456.1|WP_053540600.1|4911621_4912092_+|hypothetical-protein
MTVKSSSSLPKSVFLDTNIYILGALDLNSDESKILSLLVSDENSDEQTRVIFSQELIDQILRVGKRLQNKDWSSGLLIRLWQQLKVDFIFVEDQDIQAIADAGIIPREDAGVYLTAKQGKAKCFVSRNYKLIRALVEQTEEFECFTPSEFLQKYAP
>NZ_CP011456.1|WP_053540601.1|4912144_4912786_+|hypothetical-protein
MITNASSLTLSNLRQTFGLRLDTSDRFFDEWLNNSPTLTEAELQGLDRLTRNYNYLSQEEAPLEEIVKLVVVSPLLDLAGFYQFPFLVKAEVSTSIEVADEANAIAVQGRIDILVIQDSFWILVIESKPARLDVTAGIPQALTYLLSAPNLQSSCYGMVTNGREVLFLKCNRHQDVPQYTRSHTYRLLENTAERIQVLQGLKQIGAYIGNSRS

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Crispr_ID: NZ_CP011456_43

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011456_43

5245995-5246082

Orphan

Consensus_repeat	Method
AAATCCTGGATATCCTGATTCAGACAAAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP011456_43

>merge|NZ_CP011456|43|5245995-5246082|CRISPRCasFinder
AAATCCTGGATATCCTGATTCAGACAAATTAAAATATTAGTACACCACAAATCAAATCAAAATCCTGGACATCCTGATTCAGACAAAT

>NZ_CP011456|43|42|5245995-5246082|CRISPRCasFinder
AAATCCTGGATATCCTGATTCAGACAAAT	TAAAATATTAGTACACCACAAATCAAATCA
AAATCCTGGACATCCTGATTCAGACAAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011456.1\|WP_053540819.1\|5245069_5245432_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227028
NZ_CP011456.1\|WP_053537530.1\|5253510_5254710_-\|IS4-family-transposase	unknown	unknown	gnl\|CDD\|376573
NZ_CP011456.1\|WP_053540821.1\|5248576_5249317_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_039202281.1\|5244277_5244475_+\|DUF2283-domain-containing-protein	unknown	unknown	gnl\|CDD\|378367
NZ_CP011456.1\|WP_053540826.1\|5254838_5256668_-\|threonine--tRNA-ligase	unknown	unknown	gnl\|CDD\|237050
NZ_CP011456.1\|WP_053540822.1\|5249563_5250373_-\|metallophosphoesterase-family-protein	unknown	unknown	gnl\|CDD\|378975
NZ_CP011456.1\|WP_053540825.1\|5252416_5253439_-\|GTP-binding-protein	unknown	unknown	gnl\|CDD\|223597
NZ_CP011456.1\|WP_053540820.1\|5246879_5247671_-\|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|223377
NZ_CP011456.1\|WP_053540816.1\|5242359_5242551_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053540812.1\|5236201_5237065_-\|zinc-metalloprotease-HtpX	unknown	unknown	gnl\|CDD\|235186
NZ_CP011456.1\|WP_039202284.1\|5246084_5246672_-\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|99749
NZ_CP011456.1\|WP_053540818.1\|5243788_5244052_+\|HEPN-domain-containing-protein	unknown	unknown	gnl\|CDD\|224807
NZ_CP011456.1\|WP_053540814.1\|5237759_5239169_+\|Rieske-2Fe-2S-domain-containing-protein	unknown	unknown	gnl\|CDD\|215283
NZ_CP011456.1\|WP_053540823.1\|5250369_5251143_-\|GTP-binding-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053540817.1\|5242708_5243596_+\|IS982-family-transposase	unknown	unknown	gnl\|CDD\|372648
NZ_CP011456.1\|WP_053540813.1\|5237331_5237730_+\|fluoride-efflux-transporter-CrcB	unknown	unknown	gnl\|CDD\|223317
NZ_CP011456.1\|WP_027403144.1\|5251670_5252318_-\|GTP-cyclohydrolase-I-FolE	unknown	unknown	gnl\|CDD\|236472
NZ_CP011456.1\|WP_053540824.1\|5251155_5251509_-\|phosphoribosyl-AMP-cyclohydrolase	unknown	unknown	gnl\|CDD\|235067
NZ_CP011456.1\|WP_053540815.1\|5239510_5242213_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|319862
NZ_CP011456.1\|WP_039202282.1\|5244726_5245065_-\|XRE-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|372700

Protein	Function_ID	Function_description	E-value
NZ_CP011456.1\|WP_053540819.1\|5245069_5245432_-\|hypothetical-protein	gnl\|CDD\|227028	COG4683, COG4683, Uncharacterized protein conserved in bacteria [Function unknown].	4.83973e-36
NZ_CP011456.1\|WP_053537530.1\|5253510_5254710_-\|IS4-family-transposase	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	3.11832e-09
NZ_CP011456.1\|WP_039202281.1\|5244277_5244475_+\|DUF2283-domain-containing-protein	gnl\|CDD\|378367	pfam10049, DUF2283, Protein of unknown function (DUF2283). Members of this family of hypothetical bacterial proteins have no known function.	3.4262e-13
NZ_CP011456.1\|WP_053540826.1\|5254838_5256668_-\|threonine--tRNA-ligase	gnl\|CDD\|237050	PRK12305, thrS, threonyl-tRNA synthetase; Reviewed.	0
NZ_CP011456.1\|WP_053540822.1\|5249563_5250373_-\|metallophosphoesterase-family-protein	gnl\|CDD\|378975	pfam12850, Metallophos_2, Calcineurin-like phosphoesterase superfamily domain. Members of this family are part of the Calcineurin-like phosphoesterase superfamily.	9.66924e-17
NZ_CP011456.1\|WP_053540825.1\|5252416_5253439_-\|GTP-binding-protein	gnl\|CDD\|223597	COG0523, COG0523, Putative GTPases (G3E family) [General function prediction only].	3.12689e-114
NZ_CP011456.1\|WP_053540820.1\|5246879_5247671_-\|SDR-family-NAD(P)-dependent-oxidoreductase	gnl\|CDD\|223377	COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only].	7.82576e-67
NZ_CP011456.1\|WP_053540812.1\|5236201_5237065_-\|zinc-metalloprotease-HtpX	gnl\|CDD\|235186	PRK03982, PRK03982, heat shock protein HtpX; Provisional.	1.01479e-163
NZ_CP011456.1\|WP_039202284.1\|5246084_5246672_-\|Uma2-family-endonuclease	gnl\|CDD\|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	1.85087e-33
NZ_CP011456.1\|WP_053540818.1\|5243788_5244052_+\|HEPN-domain-containing-protein	gnl\|CDD\|224807	COG1895, COG1895, Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN [Function unknown].	1.61472e-09
NZ_CP011456.1\|WP_053540814.1\|5237759_5239169_+\|Rieske-2Fe-2S-domain-containing-protein	gnl\|CDD\|215283	PLN02518, PLN02518, pheophorbide a oxygenase.	2.69018e-94
NZ_CP011456.1\|WP_053540824.1\|5251155_5251509_-\|phosphoribosyl-AMP-cyclohydrolase	gnl\|CDD\|235067	PRK02759, PRK02759, bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE.	1.35054e-65
NZ_CP011456.1\|WP_053540817.1\|5242708_5243596_+\|IS982-family-transposase	gnl\|CDD\|372648	pfam13612, DDE_Tnp_1_3, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contains three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	7.54068e-93
NZ_CP011456.1\|WP_053540813.1\|5237331_5237730_+\|fluoride-efflux-transporter-CrcB	gnl\|CDD\|223317	COG0239, CrcB, Integral membrane protein possibly involved in chromosome condensation [Cell division and chromosome partitioning].	9.43503e-33
NZ_CP011456.1\|WP_027403144.1\|5251670_5252318_-\|GTP-cyclohydrolase-I-FolE	gnl\|CDD\|236472	PRK09347, folE, GTP cyclohydrolase I; Provisional.	5.92154e-120
NZ_CP011456.1\|WP_053540815.1\|5239510_5242213_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|319862	cd16383, GUN4, porphyrin-binding protein domain GUN4. GUN4 is a porphyrin-binding protein involved in chlorophyll biosynthesis regulation and intracellular signaling, found in aerobic photosynthetic organisms. It has been implicated in retrograde signalling between the chloroplast and nucleus. GUN4 can bind protoporphyrin IX (PIX) and magnesium protoporphyrin IX (MgPIX), substrate and product of the Mg-chelatase, as well as heme and cobalt protoporphyrin IX (CoPIX). It may play a role in protecting plants from reactive oxygen species (ROS)-mediated damage.	3.23242e-75
NZ_CP011456.1\|WP_039202282.1\|5244726_5245065_-\|XRE-family-transcriptional-regulator	gnl\|CDD\|372700	pfam13744, HTH_37, Helix-turn-helix domain. Members of this family contains a DNA-binding helix-turn-helix domain.	1.46981e-08

>NZ_CP011456.1|WP_053540819.1|5245069_5245432_-|hypothetical-protein
MTWEILFHDEFLPEFSELTTEVQEELLAHTKLLEFAGPLLRRPHADTLKGSRHKNMKELRFYADDGVWRIAFAFDPKKKAILLVAGNKAGTSEKRFYKQLITKADKRFDSHLQELKDKGE
>NZ_CP011456.1|WP_039202282.1|5244726_5245065_-|XRE-family-transcriptional-regulator
MATKLSDIMAQLPPEQRAKIEARAQELILENMTLQDMRKARKLTQESMAELLGIRQDSVSRLEKRADLLLSTLRSYVKAMGGDLKLVAEFPDRPSVIISALGELEDEDSIPE
>NZ_CP011456.1|WP_039202281.1|5244277_5244475_+|DUF2283-domain-containing-protein
MKITYDAEVDVLRIIFSNIPIEESDEEKPGIILDYDDAGNIVGIEIIDASKRIDNPCLFEYSVNN
>NZ_CP011456.1|WP_053540818.1|5243788_5244052_+|HEPN-domain-containing-protein
MFYIAEAFLVSENLSFSKHSAVISKFGELFARTSKIDPKFHRYLIDAEQIRLKGDYDRSERLTAEDAKLLIERTEEFLELVNYLSSC
>NZ_CP011456.1|WP_053540817.1|5242708_5243596_+|IS982-family-transposase
MELETIFCEIDDFCTYFEPMFQAQLIPSQIKKRIRPSRLCLSEIMTIIVYFHRSSYRNFKDYYLKHIFKYCQGEFPNLVSYQRFVELMPNALIPLMYYLNTRKGLNTGISFIDSTSIPICHSKRAKTNKVFKDLAGWGKSSICWYFGFKLHLIINDQGELLAFQITPGNTDDRKPVPTLTKNLFGKIFGDKGYISQKLWLELWSNGLKLITPFKKNMRNKLLSLEEKLMLRKRSLIETVNDQLKNISQLAHSRHRSVTNFMVNVVAAIIAYTWQPKKPSLRFDENEIETLPVLLA
>NZ_CP011456.1|WP_053540816.1|5242359_5242551_+|hypothetical-protein
MKNFHRDPNYIHYLAKQLAGSVLSQSASGCRKTPEFDVRKPAKNEYSKGLEAFLERAYILNKP
>NZ_CP011456.1|WP_053540815.1|5239510_5242213_+|tetratricopeptide-repeat-protein
MDWTTILKAQQTDFIQRLKSGDLLHCEKEGQHSELTVISGERLKQLRDFCWEMANKFKQKYDVKNIFFNNMKGKLGEEVVKIRLGDFVTEIDYEKYSGGDGKVDFTLTANSSIGIQVKTRYGNCDQVQWTIDREEIEKNSVLVCILCQEKFSDMEKEYGLIIAGFLPTNMIKSAANEAIVGIDELLYPGGLRGYLESFIFHQPNDYINSSYDLALIYDQQAMACRESTDYLGALSNYNKAILSNPNISAIYNNRGLIHEALGNTQSAIDDYTQALLINPSLTEAYYNRGNIRNNLRDTQGAIDDYTQALLINPADTELYYKRGLAHSYLGDKQAAISDYTQAIKLDNNYIDAYYERAEIYSKLGYKLAVIEDLTTIINIDPNEVGAYFKLGDIYYNLGLYQDAIWNYTQIIKNIPTHNYAYYNRGVACYNLGDNQGAIEDFTYLIQLSPRDANNYYYRGLARFNAGDNRGAIQDLSTIIAINSNDAQAYFNRGLIYYNLGLYQDAIRDYNQAIKILPNCANTYYNRGLTLLSLKNKQAAIDDFKKAAYIYKQENNINDYNETLKRLEYIQCVDVELKSAVSMNYTRLRDLLAAGKWKEADEETTRVMLAVAKREQLGSLDFNSINNFPCEDLHTIDKLWVRYSNERFGFSIQKRIYENVGGTKKHNSIITQAFGYAVGWKTATEWFYYGDITFDINAPKGHLPRQILVEESNGFLVCSFHIFSRVETCNITNDQKSQIQNSTLPELDNTDLISAVGQDYRKLRDYLAQGKWKEADEETERVMLAVMKREKEGWLRIEDIDNFRCEDLRTIDQLWVKYSNGKFGFSVQQRIYKSFGGTKNYNEEVWRNFGDKVGWRNFGSWLYYTNITFDIKAPKGHLPIGSEKKDRGRRSLFYRVETCNL
>NZ_CP011456.1|WP_053540814.1|5237759_5239169_+|Rieske-2Fe-2S-domain-containing-protein
MVQTQSIINENSLTEILPGGSNPDAFELAEAWYPVHYLQDLDKSKPTPFTLLGKDIVIWWDQKNSSWQVFIDQCPHRLAPLSEGRINEDGLLECPYHGWSFAGDGSCQKIPQQVAGAKAETSPRACVPSLPTTEKQGLLFVYAGNPENAANTKVPVVEPIEAAPEGWVIMNTFRDVPYDALTLLENILDPSHIAFTHHLTVGNRANAAPLELEIVESGKHGFEGIWKQGLKAGQSGKLSTTFIAPGLMWHDINAEKGRILTVVYAVPIRKGECRIIARFPFKFKSKLPGFFIKIRPRWYVHIGQNGVLEDDQIFLHYQERYLADKGGSANFNKAFYLATKADTFVAELRKWVNQYHGETFPGESLPPLLLNKEGLLERYHSHTEKCASCRQALRRIQKLKFWCGVFTILALASSPLLAFLVETKSILFVITETFIPLLLGAAWWKLSQLEREFYEGRMIPPRNLPETKR
>NZ_CP011456.1|WP_053540813.1|5237331_5237730_+|fluoride-efflux-transporter-CrcB
MLQQAEIRVPIAISLGAIAGALSRYYLTLWFTNRFGFSFPYGTFFINISGCLVMGFFATLAMEKTALISPEIKLIVATGFLGAYTTFSTFGLDTVGLLQRGNWLAAAGYFSGSTILGIISVQLGMVLARMFN
>NZ_CP011456.1|WP_053540812.1|5236201_5237065_-|zinc-metalloprotease-HtpX
MGNQLKTAILLATLSGLLIAISYWVIGGTGGLVIGVGLAAATNLFSWYQSDKIALAVYNAQPVTAAEAPALYRIVQKLSTRANIPMPGVYIVPSPTANAFATGRDPEHAAVAVTAGILDILPQDELEGVIAHELTHIINRDTLTQAIAATVAGAISFLAQMLSYSMWFGGGSRDNERGGNPLGVLATVIFAPIAATVIQLAISRTREFSADAGAAKLTGNPRALARALQRLESTARQMPLNANPAFEPLLIIHPISGQFLGNLFSSHPATEARVEALLQLERQLISR
>NZ_CP011456.1|WP_039202284.1|5246084_5246672_-|Uma2-family-endonuclease
MTIAQEIRYYSPEEYLEFEVNSELRHEYIDGLIIPMTGGTPNHNKIAGNLYVAIHFALKRQPYEVYYTDQRLWIPKRRIHTYPDVMIVQTPLVFEEGRNDTITNPVMIAEVLSKSTKGYDRDEKFAAYRTIASFQEYILIDQYTIHVEQYVKTDNRKWMFLEYEDINDTLNLTSVSCQISLADIYEKIDFTSTES
>NZ_CP011456.1|WP_053540820.1|5246879_5247671_-|SDR-family-NAD(P)-dependent-oxidoreductase
MKIQGKVALITGASRGIGKAIALELAKQGMKRLILVARDRQKLAEVAAEIEALGVEATIMALDLTHSINVNIAVAQLWRSYGPIHLLVNCAGVAHQNSFLQSKLPQLQEELSVNLLGMYTLTSLIAKRMVSQKKGIIVNVSSLMGKVAAPTMATYSATKFAIVGFTQALRQELAQHNIRVIALLPSLTETDMVRDLQSFRGVIPMTPEQVAQALVIGIENDTAEILVGWQSHLAVLCQRLAPWLLEIILQLATPKKPLPDAAG
>NZ_CP011456.1|WP_053540821.1|5248576_5249317_-|hypothetical-protein
MWAILSGIEGNLAAYEAVIADIKLKNRYVEALYIIGDLVGPRRECEQLVERVKSPRRGELEPMICKGWWEEQCLILHGLGPTGDAPELLAKYGGDTVQMLWDCVSRQTVQWLRSLDFGFFELDCLLIHGSTMGVNDELTPDTPPIQMLDRLSRMQANNLFCGRSGLTFQYQLQAGSITSEIITLDHQFSPQTVTVTPRQVIGVGNVGRIPGQATYTLYNPGTNQVQFKTVFYGQSKGFQIHPQSKT
>NZ_CP011456.1|WP_053540822.1|5249563_5250373_-|metallophosphoesterase-family-protein
MKIAVMSCIHGNYEALNAVLLDINQQKAEKIFCVGDLVGYGPHPNAVINQIRSLDIPTCAGCWDEDIVEGLNACDCSYPSLLAEKRGFQAHEWTNKEIHPENREFLASLPYSLQWQNLAFVHGSPHSNHEYLLPELDAFVALERVLSTGADVLFCGHTHVPYSRNLDAGELQVQVANQAASRKISFSSALKKIVNVGSVGEPRHGRPNATYVIYETDTQGVTLREVTYDYQKTCAAIIEKGLPEIFAWRLAHGLEYAERADDPTHVCTR
>NZ_CP011456.1|WP_053540823.1|5250369_5251143_-|GTP-binding-protein
MSLPMITVVAGLSGAGKTTWICQQIRDVRSVKKVIYFCPGTGNVPIDQTKIATEFPELRIFSDGQEIEFLYQIPTADSVYVELGAYLELDSVSKILDHRTYHAIAVIPPELKNSEYDSWANEIIYGAPAPMIIGENLWRVATTGQVIDENSLDEFWHEITHGAYGIVTRAKAIFDVNDGRSLYCDFVSGVPQIDFLELDLPRHLQGRPQRFSGIEIVGKNLDKTALKATLSDCCLSESLIFQYQQQVQQILLEGQQV
>NZ_CP011456.1|WP_053540824.1|5251155_5251509_-|phosphoribosyl-AMP-cyclohydrolase
MVLATEMIGNLKFNEQGLIPAIAQDYYDGTVLMMAWMNAESIQKTLATGEVHYWSRSRSQLWHKGATSAHIQKVKELFYDCDGDTILIKIEQVGGIACHTGVRSCFFNSVEIFPRKL
>NZ_CP011456.1|WP_027403144.1|5251670_5252318_-|GTP-cyclohydrolase-I-FolE
MTLSIRPELTAADVISSLSHQQQPTVTEAEMMQAVRTLLIGLGENPDREGLKDTPKRVVKALKFLTNGYDQSVDELLNGAVFTEDANEMVLVRDIDIFSSCEHHILPIIGRAHVAYIPNGKVIGLSKIARICEMYARRLQVQERLTLQIANALQGLLKPQGVAVVIEATHMCMVMRGVQKPGSWTVTSAMRGVFSEDARTREEFMNLIRHNANFK
>NZ_CP011456.1|WP_053540825.1|5252416_5253439_-|GTP-binding-protein
MNTITLDTTNIIPEIPKQGMPVTIITGFLGSGKTTLLNQILQNKQDLKVAVLVNEFGDINIDSQLLISVDQDMVELSNGCICCTINDGLVDAVYRVLEREERIDYLVIETTGVADPLPIILTFFSTELRDLTNIDSILTVVDAEAFDEEHFQSEAALKQITYGDIILLNKTDLVTPEKIQEVENFIHDIKHGAKILHTQYGEVALPLILDVGLTPKDKYIAIDDEDTHKHEHHHEHEHHHHHSDHLDNDGFVSISFQSYKPFDVHKFENFLTEEMPDNVFRAKGILWFSDSELRHIFQLSGPRYTLNADEWPNQPKNQVVFVGRKLDNNEIYTKLNKCLL
>NZ_CP011456.1|WP_053537530.1|5253510_5254710_-|IS4-family-transposase
MLPQSYQTIFRKHLSEQQYLTLEILLLLIQAHRQVKLSKLASLFPQPIKYESRKRNLQRFLGIGKLCVKLLWFPLIKYWIRQSLTPKQLNREQRRYFHKKQYQKYGYWMVALDRTQWKGRNIFMVTLVWGTHALPLYWETLNHVGNSNLQTQKRLIKTAIKLLKKCRIVVLADREFHSPKLAKWLDEQGVYFALRQKKNLYFQEKPEQEYQVLKNQGFKPGMSRFYEKVKCGKGDELGLFNIAVYWKRKYRNSGPKEPWYILTNLPTLQQTLCLYRCRWGIEQFFKDCKTGGYNLEDTKVNETRFLALVLLIVIAYSLATMHGQRMKKLGIETYAGRIQQHQDKYPRQSDFSFALYGQLWIYGMELWADLALNLINLKPHKRLFFQRGFQALSLMKQAL
>NZ_CP011456.1|WP_053540826.1|5254838_5256668_-|threonine--tRNA-ligase
MVSSITQSQDSLNLHEDDKLTRIRHTSAHIMAMAVQRLFPGTKVAIGPVTEIGFYYDFDCPVSITPDDLGKIEIEMQRIIKVNLPIIREEVERAEIRAEIAELNEPYKLEILERIPESEIITRYFIGTPETGNSETSLFVTDIQPANNYWWDLCAGPHINFTGEIDPHAFKLLNVAGAYWQGDETKPQLQRIYGTAWQTKAELENYLQLREEALRRDHRKLGQELNLFSIQEEAGGGLVFWHPNGAIIRYIIEDYWREAHLESGYQLLYTPHIANLNLWKTSGHFDFYQESMFDSMDVENQAYQIKPMNCPFHVLTYKHQLHSYRELPLRWAELGTVYRYERSGALHGLMRVRGFTQDDAHIFCLPDQIADEILGVLNLTEQILSDFGFKQYEINLSTRPDKSVGTDDVWELATTALEQALNTKGWNYVVDQGGGAFYGPKIDIKIKDAIGRLWQCSTIQVDFNLPERFDMEYIAADGSRQRPIMIHRAIFGSLERFFGILIENYAGDFPLWLAPVQLRLLPVSDDFREYAKSVAADFKKVGFRVEVDSSGERLGKQIRTAQLEKIPVVAVVGKKEVESKTLSVRSRQAGDLGVLTLSELVDHLQVIKH

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Crispr_ID: NZ_CP011456_44

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011456_44

5383292-5383453

Orphan

Consensus_repeat	Method
GCGATAGCGAACGCATTGCGTCCCGGAGGGAACTAGCGCGACCTAGGAATCGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP011456_44

>merge|NZ_CP011456|44|5383292-5383453|CRISPRCasFinder
GCGATAGCGAACGCATTGCGTCCCGGAGGGAACTAGCGCGACCTAGGAATCGCTCTGGAAGTCTTTCATTGCCTTCCCATAGCGTTTCCCACAGAGGAGGAATAACGAAGCGATAGCGAACGCATTGCGTCCCGGAGGGAACTAGCGCGACCTAGGAATCGC

>NZ_CP011456|44|43|5383292-5383453|CRISPRCasFinder
GCGATAGCGAACGCATTGCGTCCCGGAGGGAACTAGCGCGACCTAGGAATCGC	TCTGGAAGTCTTTCATTGCCTTCCCATAGCGTTTCCCACAGAGGAGGAATAACGAA
GCGATAGCGAACGCATTGCGTCCCGGAGGGAACTAGCGCGACCTAGGAATCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011456.1\|WP_053540913.1\|5382607_5383141_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|275056
NZ_CP011456.1\|WP_053540906.1\|5373638_5374787_+\|DegT/DnrJ/EryC1/StrS-family-aminotransferase	unknown	unknown	gnl\|CDD\|99740
NZ_CP011456.1\|WP_053540910.1\|5378237_5378945_-\|molybdopterin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|239026
NZ_CP011456.1\|WP_053540909.1\|5376948_5378190_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|270616
NZ_CP011456.1\|WP_053540919.1\|5390344_5391289_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053541393.1\|5379950_5381897_+\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|380161
NZ_CP011456.1\|WP_053540921.1\|5393322_5395551_-\|polysaccharide-biosynthesis-tyrosine-autokinase	unknown	unknown	gnl\|CDD\|225747
NZ_CP011456.1\|WP_053540907.1\|5374976_5375720_-\|DUF561-domain-containing-protein	unknown	unknown	gnl\|CDD\|113257
NZ_CP011456.1\|WP_053540920.1\|5391434_5392154_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274390
NZ_CP011456.1\|WP_053540923.1\|5397293_5398607_-\|NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|226576
NZ_CP011456.1\|WP_081424319.1\|5374796_5375009_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053540917.1\|5387415_5388402_-\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|366154
NZ_CP011456.1\|WP_053540911.1\|5378970_5379564_-\|thiosulfate-reductase-cytochrome-B-subunit-(membrane-anchoring-protein)	unknown	unknown	gnl\|CDD\|226602
NZ_CP011456.1\|WP_053540908.1\|5376015_5376864_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235046
NZ_CP011456.1\|WP_053540916.1\|5386020_5387223_-\|glycosyltransferase-family-4-protein	unknown	unknown	gnl\|CDD\|340831
NZ_CP011456.1\|WP_053540918.1\|5388448_5390278_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
NZ_CP011456.1\|WP_053540914.1\|5383642_5385067_-\|glucose-6-phosphate-isomerase	unknown	unknown	unknown
NZ_CP011456.1\|WP_053540912.1\|5381920_5382292_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053540915.1\|5385158_5386103_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|133045
NZ_CP011456.1\|WP_053540922.1\|5395939_5397037_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|340833

Protein	Function_ID	Function_description	E-value
NZ_CP011456.1\|WP_053540913.1\|5382607_5383141_+\|hypothetical-protein	gnl\|CDD\|275056	TIGR04211, hypothetical_protein, SH3 domain protein. Members of this protein family have a signal peptide, a strongly conserved SH3 domain, a variable region, and then a C-terminal hydrophobic transmembrane alpha helix region.	0.000522885
NZ_CP011456.1\|WP_053540906.1\|5373638_5374787_+\|DegT/DnrJ/EryC1/StrS-family-aminotransferase	gnl\|CDD\|99740	cd00616, AHBA_syn, 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein encoded by gene pglA, is a galactosyltransferase involved in pilin glycosylation. Additionally, this CD consists of ArnB (PmrH) aminotransferase, a 4-amino-4-deoxy-L-arabinose lipopolysaccharide-modifying enzyme. This CD also consists of several predicted pyridoxal phosphate-dependent enzymes apparently involved in regulation of cell wall biogenesis. The catalytic lysine which is present in all characterized PLP dependent enzymes is replaced by histidine in some members of this CD.	5.95071e-166
NZ_CP011456.1\|WP_053540917.1\|5387415_5388402_-\|glycosyltransferase-family-2-protein	gnl\|CDD\|366154	pfam00535, Glycos_transf_2, Glycosyl transferase family 2. Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.	1.75714e-31
NZ_CP011456.1\|WP_053540909.1\|5376948_5378190_+\|hypothetical-protein	gnl\|CDD\|270616	cd14668, mlta_B, Domain B insert of mltA_like lytic transglycosylases. Escherichia coli MltA is a membrane-bound lytic transglycosylase comprised of two domains separated by a large groove, where the peptidoglycan strand binds. Domain A is made up of an N-terminal and a C-terminal portion, which correspond to the 3D domain, named for 3 conserved aspartate residues. Domain B is inserted within the linear sequence of domain A. MltA is distinct from other bacterial lytic transglycosylases (LTs), which are similar to each other. Escherichia coli peptidoglycan lytic transglycosylase (LT) initiates cell wall recycling in response to damage, during bacterial fission, and cleaves peptidoglycan (PG) to create functional spaces in its wall. PG chains (also known as murein), the major components of the bacterial cell wall, are comprised of alternating beta-1-4-linked N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), and lytic transglycosylases cleave this beta-1-4 bond. Typically, peptidoglycan lytic transglycosylases (LT) are exolytic, releasing Metabolite 1 (GlcNAc-anhMurNAc-L-Ala-D-Glu-m-Dap-D-Ala-D-Ala) from the ends of the PG strands. In contrast, MltE is endolytic , cleaving in the middle of PG strands, with further processing to Metabolite 1 accomplished by other LTs. In E. coli, there are six membrane-bound LTs: MltA-MltF and soluble Slt70. Slt35 is a soluble fragment cleaved from MltB. Bacterial LTs are classified in 4 families: Family 1 includes slt70 MltC-MltF, Family 2 includes MltA, Family 3 includes MltB, and Family 4 of bacteriophage origin. While most of the LT family members are similar in structure and sequence with a lysozyme-like fold, Family 2 (including mltA) is distinct.	8.78792e-06
NZ_CP011456.1\|WP_053541393.1\|5379950_5381897_+\|HAMP-domain-containing-protein	gnl\|CDD\|380161	NF033092, HK_WalK, cell wall metabolism sensor histidine kinase WalK. This model describes WalK as found in Staphylococcus aureus (sp\|Q2G2U4.1\|WALK_STAA8). A shorter version, as found in Streptococcus pneumoniae, called WalK(Spn) or VicK, is not included. WalK is part of a two-component system and works with partner protein WalR.	2.17474e-67
NZ_CP011456.1\|WP_053540921.1\|5393322_5395551_-\|polysaccharide-biosynthesis-tyrosine-autokinase	gnl\|CDD\|225747	COG3206, GumC, Uncharacterized protein involved in exopolysaccharide biosynthesis [Cell envelope biogenesis, outer membrane].	2.42015e-51
NZ_CP011456.1\|WP_053540907.1\|5374976_5375720_-\|DUF561-domain-containing-protein	gnl\|CDD\|113257	pfam04481, DUF561, Protein of unknown function (DUF561). Protein of unknown function found in a cyanobacterium, and the chloroplasts of algae.	5.28425e-99
NZ_CP011456.1\|WP_053540920.1\|5391434_5392154_-\|hypothetical-protein	gnl\|CDD\|274390	TIGR03013, EpsB_2, sugar transferase, PEP-CTERM system associated. Members of this protein family belong to the family of bacterial sugar transferases (pfam02397). Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria (notable exceptions appear to include Magnetococcus sp. MC-1 and Myxococcus xanthus DK 1622 ). These genes are generally found near one or more of the PrsK, PrsR or PrsT genes that have been related to the PEP-CTERM system by phylogenetic profiling methods. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species. These proteins are homologs of the EpsB protein found in Methylobacillus sp. strain 12S, which is also associated with a PEP-CTERM system, but of a distinct type. A name which appears attached to a number of genes (by transitive annotation) in this family is "undecaprenyl-phosphate galactose phosphotransferase", which comes from relatively distant characterized enterobacterial homologs, and is considerably more specific than warranted from the currently available evidence.	2.13949e-06
NZ_CP011456.1\|WP_053540923.1\|5397293_5398607_-\|NAD(P)-dependent-oxidoreductase	gnl\|CDD\|226576	COG4091, COG4091, Predicted homoserine dehydrogenase [Amino acid transport and metabolism].	0
NZ_CP011456.1\|WP_053540910.1\|5378237_5378945_-\|molybdopterin-dependent-oxidoreductase	gnl\|CDD\|239026	cd02108, bact_SO_family_Moco, bacterial subgroup of the sulfite oxidase (SO) family of molybdopterin binding domains. This domain is found in a variety of oxidoreductases. Common features of all known members of this family, like sulfite oxidase and nitrite reductase, are that they contain one single pterin cofactor and part of the coordination of the metal (Mo) is a cysteine ligand of the protein and that they catalyze the transfer of an oxygen to or from a lone pair of electrons on the substrate. The specific function of this subgroup is unknown.	4.55717e-83
NZ_CP011456.1\|WP_053540911.1\|5378970_5379564_-\|thiosulfate-reductase-cytochrome-B-subunit-(membrane-anchoring-protein)	gnl\|CDD\|226602	COG4117, COG4117, Thiosulfate reductase cytochrome B subunit (membrane anchoring protein) [Energy production and conversion].	8.15739e-46
NZ_CP011456.1\|WP_053540908.1\|5376015_5376864_+\|hypothetical-protein	gnl\|CDD\|235046	PRK02507, PRK02507, proton extrusion protein PcxA; Provisional.	2.96777e-139
NZ_CP011456.1\|WP_053540916.1\|5386020_5387223_-\|glycosyltransferase-family-4-protein	gnl\|CDD\|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	4.70418e-60
NZ_CP011456.1\|WP_053540918.1\|5388448_5390278_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	6.91816e-139
NZ_CP011456.1\|WP_053540915.1\|5385158_5386103_-\|glycosyltransferase	gnl\|CDD\|133045	cd06423, CESA_like, CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the elongation of beta-1,2 polyglucose chains of Glucan.	4.06391e-18
NZ_CP011456.1\|WP_053540922.1\|5395939_5397037_-\|glycosyltransferase	gnl\|CDD\|340833	cd03804, GT4_WbaZ-like, mannosyltransferase WbaZ and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. WbaZ in Salmonella enterica has been shown to possess mannosyltransferase activity.	1.93782e-125

>NZ_CP011456.1|WP_053540913.1|5382607_5383141_+|hypothetical-protein
MLKKNLSNLIQEETTKFTPLQGEPVIEVSAEAVLETQVPTDNTPVIPINNQLELEASIKELQKTVSTLKQKESTLIKQISDLQTAFSEKEALVERLTRELYETKQTALQLADSNSQLLEEIKVLKQPTQPSYPQMSQQASQISKSIQYKKSHRSVERLQEKPNQDSEDFSQNTWLYD
>NZ_CP011456.1|WP_053540912.1|5381920_5382292_-|hypothetical-protein
MATIPCPRCHQIIDSQAITCPQCRLLLKAYGHPGIPLHHAQGNDYLCDSCSYHFDHTCNFPQYPYAQDCPLYQNMEESTLELQKQNSRYSLSIRVNNWIKRHQTLLLILALLLVCLLITLFNA
>NZ_CP011456.1|WP_053541393.1|5379950_5381897_+|HAMP-domain-containing-protein
MAKGNASLAASIANWWSEFTLQTKLLAVATLMVSLVMSGLTFWAINTIQQDARLNDTRFGRDLGLLLGANVAPFIADHNLTEVAQFSQRFFSATSSVRYMLYADETGQIFFGLPFWEPEVENSLTIKRHIQLPEDYPGNEDQPMVRQHNTPDGAVTDVFVPLIVDKKYLGVLAVGINPNQTAVISTNFTRDVTIAVFITIWVMVILAGVINALTITKPIKELLVGVKQIAAGNFKQRIDIPLGGELGELIFSFNEMAERLERYEEQNIEELTAEKAKLETLVSTIADGAVLIDNNMQVILVNPTARRIFAWEGVDVVGSNILHQLPHSVQMEISRTLYEMAAGECESAEFRILLKQPTQRTIRIVLTTVLNLQRESIKGIAITVQDISREVELNEAKSQFISNISHELRTPLFNIKTYIETLHDYGEDLGIDERKEFLQTVNNETDRLTRLVNDVLDLSKLESGRNYTFDKVDLPQAIEQTLRTYQLNAKDKGIEIYQELNPDLPFVLGNYDLLLQVFGNLIGNSLKFTLAGGKVVIRAYQLDANSYSQHHAGKVRIEISDTGIGIAPEDQQAIFDRFFRVENRVHTLEGTGLGLSIVRNIMDRHHSQVNLVSEVGIGTTFWFDLEIFEEEILSTVETMPETLELNQV
>NZ_CP011456.1|WP_053540911.1|5378970_5379564_-|thiosulfate-reductase-cytochrome-B-subunit-(membrane-anchoring-protein)
MTSPEIPRKSPSQAIAARIFHAGNVISLFIMITSGLQIYNANPVFGGRGGLSIFPLFTLGGWLAGGRHWHFAAMWLFSINLFCYGIYIFVTQRWKKRFVSDKDIKALQKTQNHQRLNYAWHRIIYTAIIPILLLAIFTGIGMYKPAQFSWIVDIFGSWQALRIVHFASVPIVVVFVWFHWRLGQNVGGNALTKSMFW
>NZ_CP011456.1|WP_053540910.1|5378237_5378945_-|molybdopterin-dependent-oxidoreductase
MNNHEFARRKFLQISGFSSMSLLLGGCGTPMFADFVGKLSEPLNQKFEELIFQPQKPVPEFLPSQIEPSQLIINSFKSTPIIDLEKYRLIIDGEVNHPLSLSMADIQALPLTSMIIRHVCVEGWAAIVQWGGIRLREIIALSQPKSQVKYAYFKSADGYYESWDIASALHPQTLLAYQKNGAALPVENGAPLRLASPIKLGYKQSKWVTRVTLTSKLSNAKGYWEDMGYEWFAGL
>NZ_CP011456.1|WP_053540909.1|5376948_5378190_+|hypothetical-protein
MRILFNQKFKITVFIAALLVIVFTNKQPIQQQQIVKNVSLSQIGNPPIQVSSDNLPTPKPSNINAKNNEKSTFYSVINEWQKYQYSINSNQVLTAGKLPNNPINFNQADLLTVLTNTRKYFQQYSQEDPDIQRTGILVTQGVTVKDILKTLDFMIVVLEEDISNKRTTRLQDPNFINANFRVIKWSAHNPENLQQKKLRITKYAAFIHPGSRQKTSKYNTPIYAINEEVSQNKFYTQYTKQDVLSGIYEPGGKEFGKVKPIAYLTRNGLEAALMQGTVLVNFTDGTKEFLNVDKNNGMSYIRGLKATAQKRYWYFQEVDAIKGYGYKIDAKISIKPGVTFAGDVLNIGLGRIIVTEDNQKRLKMGVIADTGGAFLPNLYQLDFLAGTFASEKDFEQYIQKLPEYTNAYILVKK
>NZ_CP011456.1|WP_053540908.1|5376015_5376864_+|hypothetical-protein
MKKSSRSNQDVSSQPFIFLKTGIFPKSIGKTFQKILSDISPNADQEFIKKYQISRQRTTIAVKFLLLLIIIPLLTHHLSKRLFILPIVENLRNDHSGQIFLNQEMEEKAFHELKIFTAKLKFESLLDSETKISPENRESKIKAKAIELAAEFQHKSTNAISNIFADIIALIAFALVIVFSAKDIISLQHFIDQVVYGLSDSAKAFLIILSTDVFVGFHSPHGWEVILEGFTEHLGLPANRNYIFMFIATFPVILDTIVKYWIFRYLSRLSPSALATLKEMND
>NZ_CP011456.1|WP_053540907.1|5374976_5375720_-|DUF561-domain-containing-protein
MTMYPNLNRAFSHPVLKVISGLNNFNAASVAATVKAADLGGATFVDIAADVDLVRLAKNLTKLPICVSAVEPEKFVTAVAAGADLIEIGNFDSFYAQGRRFEAAEVLELTRQTRALLPEITLSVTVPHILTLDQQVQLAEDLVKAGADIIQTEGGTSSNPIHSGTLGLIEKAAPTLAAAYEIARAVSVPVLCASGISSVTAPLAIASGASGVGVGSAINQLNSEIAMIAAVRSLVEALATANTRTFA
>NZ_CP011456.1|WP_081424319.1|5374796_5375009_+|hypothetical-protein
MRRSRGQGGSGEYLYSLLLPLASCLLPLASCLLPLYSCLLPLASCLLPLASCLLPLAFYFLSKCASICSC
>NZ_CP011456.1|WP_053540906.1|5373638_5374787_+|DegT/DnrJ/EryC1/StrS-family-aminotransferase
MIKSVNSIPAFDIKQQYATIETEVSAAVLAVLASGRYIGGPAVTDFEQQFADYHGVSECVACNSGTDALFLALRALGIGAGDEVITTPFTFFATTEVISAVGAIPVFVDIDATTFNLDVEKVAAAITSKTKAIMPVHLFGLPVDMTGLMEIAKAHNLRVIEDCAQATGASWENQKVGSIGHIGCFSFYPTKNLGGCGDGGAITTNDPAIATQLRVLREHGSKVRYIHEEIGVNSRLDAIQAVILQIKLRYLDLWNSRRKQIADYYYQHLSQVSDIIVPQEFPGGVGVWNQYTIRISGERRNGASGKYRDSVKNQMQEQGVNSMIYYPLPLHLQPVYKNLGYQLGQLPAAEQASQEVLSLPMFPELEQEQQDKVIDTLKNCLS
>NZ_CP011456.1|WP_053540914.1|5383642_5385067_-|glucose-6-phosphate-isomerase
MISKPTLFNTVLKEQFSPQDRSAQSWIIILAFILLITACYFTSTGSLRLVFPATAFLVAAFLYLRHPIHYIGFTWWIWFLTPLITRLVDYKIGWDPTRQMLIAPYLVVFLTIFTFSKHLPSSLRQGGLPFLLAAIGVCYGCLIGLIYNQPLPVVRSFLDWLSPIIFAFHLFSNWRDYPSYRQHLQRTFIWCVLILGAYGVYQFVVAPEWDRYWLIQSKMFTSAGHPIPFGMRVWSTLHSPGPFGTVMQAGLLLLFTSTGPLIFPASAVGYLSFLLSQVRTSWGGWLLGIIMIFGSVKPKIQMRLITIILVMSICVIPLVTIEPLSKVITTRFESFSNLEQDGSFRDRSATYDRNLNLALSNVVGNGFGNIWKVNEKTGQIEVIVIDSGILDMFFTLGWIGAIPYISGLVLMLITVSNYTEGRFDSFLSAARAIGISSCAQLIIYSGMLSIAGMIMWGFLAMAMAGHKYYSRPQS
>NZ_CP011456.1|WP_053540915.1|5385158_5386103_-|glycosyltransferase
MRNTVLIPTYRRPQDLARCLKALQQQTKSVDQAIVVVRDTDTETQQFLQQFPPHLLPLQIVTVTQPGVVSALNAGLAQVQGDILSITDDDAAPHPDWLAKINTHFSVNYAVGGVGGRDWVYQGDKLENGSRPIVGKLQWWGRVIGNHHLGIGAPREVDVLKGVNMSFRTQAIGKLRFDDRMQGTGAQVHFEMSFALTLKRTGWKIIYDPSIGVDHYPAQRFDEDQRHNFNDTALINLVHNETLILLEHLSPLRQIIFLSWSILVGTRESLGICQWLRLFPQQKEIASKKLRASLRGRWLGYQKYRKIGNHHLSY
>NZ_CP011456.1|WP_053540916.1|5386020_5387223_-|glycosyltransferase-family-4-protein
MKICIVTHKIRKGDGQGRVNYEVVQEAIRRGHDLTLLASEIAPELAENSAVNCIYIPVEGYPTEFIRNFIFAQESADWLRKNRANLDLIKVNGAITMGASDVNAVHFVHGSWLKSPVHISHKRKDLYGLYQWLFTAANAYWEKQAFRKSKIIIAVSEKVAQELVNIDVPRSQIRVVVNGVDLQEFAPGVSSRTELGLPENVNLALFAGDIRISRKNLDTVLHALVKVPELHLAVVGGTQDSPYPAMAKALNISKRVHFLGYRRDMPQIQRASDLFVFPSRYEPFGLVVIEAMASGLPVITATTTGAADLVNPDCGIVLDDCDDVNALADALGLLNSDRSLRQKMGKVARTIAEQHSWSTMAQTYLNIFEELITHEKHSSHSHLSPSSRPSPLSESTATAN
>NZ_CP011456.1|WP_053540917.1|5387415_5388402_-|glycosyltransferase-family-2-protein
MLNINSSEPLVSVIIPTYNRPEYLKQAINSAVNQTYQNLEIIVSDNCSSENPQALIESFQDSRIKFWRHEQNIGMLANQFHGFKIATGKYVASLHDDDIWNEDFLSKLVPNLEANPDLILAFCDQYIIDGDSKINVAATENNTRSYKRDQITPGVHKNFTQIGLIDKSIPTAAACVIRNGVLNWDNIPSEVDGMWDLYLTYLCCISGYGVYYVPEKLTQYREHEQTDTMLSGSRNVQAKIRKGKSEIFCYQTFMEDQRLEEFKSYFKTKWLEANTTLGIGLLRDQKITDARRYFWQTLSEQKFNLRTLVALIISFIPTNLTNKIWKIS
>NZ_CP011456.1|WP_053540918.1|5388448_5390278_-|ABC-transporter-ATP-binding-protein
MDSKFLPSTMKILQATSWWQNNRVILREFKHFRVVAILAIVFSALAASFEGFGLGFLLVFLQSLTTPGSEPVKTGIEWFDILILGINGSATERLYRISALIVVTTCMRASFNYIGQICIQFSEISLVDNLRKRIFQQLEAQTLNYFSHKKSGELVNILTSEMERIRQIFGGLAFLITRSFTLIVYSISLFILSWKLTIVSILLFSLLAVALSTLNKQIRERSFAITSANDNFTARVLEFIEGIRTIHAFSTQEFERNRYYQASEKIVNTWKSVYWISLIVKPLAESISTLILISMIIVALATGLMKVSALLTFFFVLFRIIPMTQDLNGVVAFLSTQAGAVENIKDLLKPDDKIYFQNGALRFPGFRRSIDLVSVDFDYSLNQRVLHNITLSIKQGEMTALIGSSGAGKTTLADLIPRFHDATDGYIYIDEVDIRKFDINSLRSKIAVVSQNTFIFNTSVWNNIAYGTPTATEAEIKEAARLANALEFILEMPEGFDTQLGDRGVRLSGGQRQRIAIARALLKNPEILILDEATSALDSVSERLIQESLEKLSVGRTVIAIAHRLSTIAKADKVVVLEQGKIVEQGAYQELLQQRGKFWQYYQIQNEVR
>NZ_CP011456.1|WP_053540919.1|5390344_5391289_-|hypothetical-protein
MQTAICTVFEKDYHYGVGALVNSLYYHGFRGIIWAGYRGNTPDWAKELKTETGYQEFSVDEGCAIRFVKLTTPKHLGFYKPDFMSQLWENYCPDIDALFYFDPDIVNKCNWDFYENWVSRGIALCGDSWYLVPANHPRRLAWKEFAENNGFACERELDYHYNSGFIGVHKNYKSILKVWQKLEELGEMAGYANLKDLYNGNTFNHYPYLYGDQTYLNLALMLTNYPLSTVGPDGMDFVPGGTIMSHATVPHIKPWRKKLLLSALEGSSPTITDKLYWRHSQTPIQLYSIPKILWQKFEILCGSALGRFIRRAPM
>NZ_CP011456.1|WP_053540920.1|5391434_5392154_-|hypothetical-protein
MPISVISSLNSNSIVPQQSENFNFLSCSLKWRRGKLLVKASEKFSQPHLAALENEESLIECLKHSPVSLVSIDPKIGDSLLKVWANACQKANKPIFINISGHQKLPKKGNQIFRTLQIIIDWTWALLLLLFMSPVILGGLITMQIYSPKLLFNYEWYVGENGQLFQIIKFSSMAKQEMTDLNIILGTFILNNLSNVLNILQGKFCLINNRCLSLESAVKLSLESQNNKLNKQNKFSGVS
>NZ_CP011456.1|WP_053540921.1|5393322_5395551_-|polysaccharide-biosynthesis-tyrosine-autokinase
MVQTSLNPNINSASETEPGYGQMFAVILRRFPWLLLVLLSSTAIAGIITLKTPPSFKSTMQLLVEPNYQGKKETDNTESQFTDANVEVDTATQLNLMQSSGLIKKAVDRLKTEYPDLTVMDLKKSLVLTQIKTPEDNIATKIFQVDYTDSDPGKTQKVLKTIQQVYLEYNKQQQDSRLQKGLQVIRDQLRKATDEVTASEANLQRFRRSQNLIDPDAQAKTVEIALNTVQQERQTTRSQYEEALAKQKSLQTQLNRSPQNALVSSRLSQSTRYQGLLNEIQKTELALAQERLRFTDDTPSVQKLYEQLQSQKQLLQKEVSRTLGEKTNSTFNSGDNLLEQGQLGQIDLNLTGQLVETQTTIVALTARDQTLAAKEKELQADLKRFPSLLAYYNRILPQLQFSRERLEQLLRAEQKLRQELSKGGFNWEVVEEPQEGLHTGPNMRQNLLLGGVIGLMLGGLAAFIREASDDAVHTTAELEKQAALPLLGTTPKLPPPKPRESMIKLPFGKPEVLAPWTIQVLQSSPRWESLDLIYKNIELLNKVSDLRSLMVTSALPDDGKSALALGLAMSAARLHKKVLLIDANLRDPNLHKQLNLPNEQGLSSLLESEVNLPNQISVPYSGSSYIDILTAGPTPTDPAHLLSSPRMIQLIAAFEENYDLVIIDAPSVLGLVDAMLTASSCRSVVMMASIGKVTRTQLNQATGMLSRLNLIGVVANGVSPSDSTYVPYVKAKQLVLQPAMEE
>NZ_CP011456.1|WP_053540922.1|5395939_5397037_-|glycosyltransferase
MKIALVHDYLTQRGGAERVFELLCKRYPDADIFTSLYDPQKSIDLGERIINTTFLQKIPGATKYFRMLAPLYFPAFRSLDLQDYDLIISSSTSFAKAVRKNPQAKHICFCHNVTRFLWDTETYLREYGDYRYFAPLIEKIFQMMRDVDLKYAQEPDLYIANSTIVAQRIQKIYHKQAIAINYPIDTSNFVFSDTKEEYYLASARMISYKRLDIIVEAFNWLGWNLLISGDGPEQERLKAQALPNIQFLGHVSDRERKDLFSKAKSIIVAALEDYGLVPVEANASGTPVIAYGAGGVLDTQIPGKTGVFFKRQAPCSLQAALLEAGGISWDYETIRNHAVSNFSEQSFFSKVEQVIDQASSSSNLF
>NZ_CP011456.1|WP_053540923.1|5397293_5398607_-|NAD(P)-dependent-oxidoreductase
MIIVDKALQARADLGKPVKVAMIGAGFMGRGIANQIINSVPGMELVAISNRHIDNAKRAYLEAGIEDIKIVTNLADLEEAIAQNEYAITEDAMLLCEADGIDAIIEVTGTIEYAAHLVMCAIAHHKHIILMNAELDGTIGPILKVHADRAGVILSACDGDQPGVEMNLYRFVKSIGLKPLLCGNIKGLQDPYRNPTTQAGFAQRWGQNPAMVTSFADGTKISFEQAIVANGTGMKVAKRGMLGYDYTGHVDEMTKMYDIDQLQELGGIVDYVVGTKPGPGVFVFATHEDPKQRHYLNLYKLGEGPLYSFYTPYHLCHFEVPLSVARAVLFHDAVLAPIAGPVVDVVTTAKIDLQAGATLDGIGYYMTYGQCENSPIVQQQNLLPMGLAEGCRLKRDIPKDQVLTYDDVELPEGRLCDQLRAEQAVYFAPVKTLALTK

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Crispr_ID: NZ_CP011456_45

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011456_45

5407038-5407128

Orphan

Consensus_repeat	Method
ACTCCTGAACTCCTGACTCCTGACTCCTGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP011456_45

>merge|NZ_CP011456|45|5407038-5407128|CRISPRCasFinder
ACTCCTGAACTCCTGACTCCTGACTCCTGAACTCCTGATAGCGCAGCGTGGCGTTAGCCATACTCCTGAACTCCTGACTCCTGACTCCTGA

>NZ_CP011456|45|44|5407038-5407128|CRISPRCasFinder
ACTCCTGAACTCCTGACTCCTGACTCCTGA	ACTCCTGATAGCGCAGCGTGGCGTTAGCCAT
ACTCCTGAACTCCTGACTCCTGACTCCTGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011456.1\|WP_053540935.1\|5417235_5417748_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377670
NZ_CP011456.1\|WP_053540924.1\|5399434_5400259_-\|phytanoyl-CoA-dioxygenase	unknown	unknown	gnl\|CDD\|368580
NZ_CP011456.1\|WP_039204310.1\|5398609_5399155_-\|dTDP-4-dehydrorhamnose-3,5-epimerase	unknown	unknown	gnl\|CDD\|380337
NZ_CP011456.1\|WP_039204101.1\|5410308_5410983_-\|VWA-domain-containing-protein	unknown	unknown	gnl\|CDD\|226696
NZ_CP011456.1\|WP_053540931.1\|5409473_5410256_-\|protein-phosphatase-2C-domain-containing-protein	unknown	unknown	gnl\|CDD\|379325
NZ_CP011456.1\|WP_053540936.1\|5418027_5418672_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|340813
NZ_CP011456.1\|WP_039204092.1\|5400575_5400761_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237403
NZ_CP011456.1\|WP_053540925.1\|5400811_5401825_-\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|366154
NZ_CP011456.1\|WP_053540923.1\|5397293_5398607_-\|NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|226576
NZ_CP011456.1\|WP_053540927.1\|5404217_5405429_-\|L-2-hydroxyglutarate-oxidase	unknown	unknown	gnl\|CDD\|183292
NZ_CP011456.1\|WP_053540937.1\|5419213_5419918_-\|M48-family-metallopeptidase	unknown	unknown	gnl\|CDD\|307807
NZ_CP011456.1\|WP_053540926.1\|5401864_5402833_-\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|366154
NZ_CP011456.1\|WP_053540930.1\|5407175_5409371_-\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|226699
NZ_CP011456.1\|WP_053540928.1\|5405493_5406267_-\|glucose-1-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|133015
NZ_CP011456.1\|WP_053540933.1\|5413430_5413694_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_027403013.1\|5403048_5404086_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|212494
NZ_CP011456.1\|WP_053540932.1\|5411527_5412910_+\|response-regulator	unknown	unknown	gnl\|CDD\|381129
NZ_CP011456.1\|WP_053540934.1\|5414323_5416246_+\|DDE-type-integrase/transposase/recombinase	unknown	unknown	gnl\|CDD\|366234
NZ_CP011456.1\|WP_053541394.1\|5423058_5423448_-\|type-II-toxin-antitoxin-system-VapC-family-toxin	unknown	unknown	gnl\|CDD\|226267
NZ_CP011456.1\|WP_053540922.1\|5395939_5397037_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|340833

Protein	Function_ID	Function_description	E-value
NZ_CP011456.1\|WP_053540924.1\|5399434_5400259_-\|phytanoyl-CoA-dioxygenase	gnl\|CDD\|368580	pfam05721, PhyH, Phytanoyl-CoA dioxygenase (PhyH). This family is made up of several eukaryotic phytanoyl-CoA dioxygenase (PhyH) proteins, ectoine hydroxylases and a number of bacterial deoxygenases. PhyH is a peroxisomal enzyme catalyzing the first step of phytanic acid alpha-oxidation. PhyH deficiency causes Refsum's disease (RD) which is an inherited neurological syndrome biochemically characterized by the accumulation of phytanic acid in plasma and tissues.	0.00778866
NZ_CP011456.1\|WP_039204310.1\|5398609_5399155_-\|dTDP-4-dehydrorhamnose-3,5-epimerase	gnl\|CDD\|380337	cd00438, cupin_RmlC, RmlC carbohydrate epimerase, involved in dTDP-L-rhamnose production. RmlC (deoxythymidine diphosphate (dTDP)-4-keto-6-deoxy-D-hexulose 3, 5-epimerase or dTDP-6-deoxy-D-xylo-4-hexulose 3,5-epimerase; also known as RfbC) is a carbohydrate epimerase involved in the production of dTDP-L-rhamnose, a precursor of the bacterial cell wall constituent, L-rhamnose. L-Rhamnose (6-deoxy-l-mannose) plays an important role in the cell-wall structure of many bacterial species. It has been found to contribute to the virulence of several species, including the Gram-negative Salmonella enterica and Vibrio cholerae, where it is present as a part of the O-antigen, and is essential for the growth of Gram-positive bacteria such as Streptococcus pyogenes. RmlC converts dTDP-6-deoxy-D-xylo-4-hexulose to dTDP-6-deoxy-L-xylo-hexulose by catalyzing the epimerization of the 5-methyl and 3-hydroxyl groups of hexulose, the third of four steps in the dTDP-L-rhamnose biosynthetic pathway. RmlC belongs to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold capable of homodimerization.	7.7835e-97
NZ_CP011456.1\|WP_039204101.1\|5410308_5410983_-\|VWA-domain-containing-protein	gnl\|CDD\|226696	COG4245, TerY, Uncharacterized protein encoded in toxicity protection region of plasmid R478, contains von Willebrand factor (vWF) domain [General function prediction only].	2.51871e-97
NZ_CP011456.1\|WP_053540931.1\|5409473_5410256_-\|protein-phosphatase-2C-domain-containing-protein	gnl\|CDD\|379325	pfam13672, PP2C_2, Protein phosphatase 2C. Protein phosphatase 2C is a Mn++ or Mg++ dependent protein serine/threonine phosphatase.	6.47853e-61
NZ_CP011456.1\|WP_053540936.1\|5418027_5418672_+\|hypothetical-protein	gnl\|CDD\|340813	cd16962, RuvC, Crossover junction endodeoxyribonuclease RuvC. Crossover junction endodeoxyribonuclease RuvC is also called Holliday junction resolvase RuvC. It is part of the RuvABC pathway in Escherichia coli and other Gram-negative bacteria that is involved in processing Holliday junctions, which are formed by the reciprocal exchange of strands between two DNA duplexes. Holliday junction resolvases (HJRs) are endonucleases that specifically resolve Holliday junction DNA intermediates during homologous recombination. RuvC is thought to bind either on the open, DNA exposed face of a single RuvA tetramer, or to replace one of the two tetramers. Binding is proposed to be mediated by an unstructured loop on RuvC, which becomes structured on binding RuvA. RuvC can be bound to the complex in either orientation, therefore resolving Holliday junctions in either a horizontal or vertical manner. HJRs occur in archaea, bacteria, and in the mitochondria of certain fungi. These are referred to as the RuvC family of Holliday junction resolvases, RuvC being the Escherichia coli HJR. RuvC and its orthologs are homodimers and display structural similarity to RNase H and Hsp70.	0.00411731
NZ_CP011456.1\|WP_039204092.1\|5400575_5400761_-\|hypothetical-protein	gnl\|CDD\|237403	PRK13505, PRK13505, formate--tetrahydrofolate ligase; Provisional.	0.00924986
NZ_CP011456.1\|WP_053540925.1\|5400811_5401825_-\|glycosyltransferase-family-2-protein	gnl\|CDD\|366154	pfam00535, Glycos_transf_2, Glycosyl transferase family 2. Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.	1.42498e-12
NZ_CP011456.1\|WP_053540923.1\|5397293_5398607_-\|NAD(P)-dependent-oxidoreductase	gnl\|CDD\|226576	COG4091, COG4091, Predicted homoserine dehydrogenase [Amino acid transport and metabolism].	0
NZ_CP011456.1\|WP_053540927.1\|5404217_5405429_-\|L-2-hydroxyglutarate-oxidase	gnl\|CDD\|183292	PRK11728, PRK11728, L-2-hydroxyglutarate oxidase.	0
NZ_CP011456.1\|WP_053540937.1\|5419213_5419918_-\|M48-family-metallopeptidase	gnl\|CDD\|307807	pfam01863, DUF45, Protein of unknown function DUF45. This protein has no known function. Members are found in some archaebacteria, as well as Helicobacter pylori. The proteins are 190-240 amino acids long, with the C-terminus being the most conserved region, containing three conserved histidines. This motif is similar to that found in Zinc proteases, suggesting that this family may also be proteases.	9.55413e-66
NZ_CP011456.1\|WP_053540926.1\|5401864_5402833_-\|glycosyltransferase-family-2-protein	gnl\|CDD\|366154	pfam00535, Glycos_transf_2, Glycosyl transferase family 2. Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.	2.13634e-15
NZ_CP011456.1\|WP_053540930.1\|5407175_5409371_-\|tetratricopeptide-repeat-protein	gnl\|CDD\|226699	COG4248, COG4248, Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only].	1.22709e-144
NZ_CP011456.1\|WP_053540928.1\|5405493_5406267_-\|glucose-1-phosphate-cytidylyltransferase	gnl\|CDD\|133015	cd02524, G1P_cytidylyltransferase, G1P_cytidylyltransferase catalyzes the production of CDP-D-Glucose. Alpha-D-Glucose-1-phosphate Cytidylyltransferase catalyzes the production of CDP-D-Glucose from alpha-D-Glucose-1-phosphate and MgCTP as substrate. CDP-D-Glucose is the precursor for synthesizing four of the five naturally occurring 3,6-dideoxy sugars-abequose (3,6-dideoxy-D-Xylo-hexose), ascarylose (3,6-dideoxy-L-arabino-hexose), paratose (3,6-dideoxy-D-ribohexose), and tyvelose (3,6-dideoxy-D-arabino-hexose. Deoxysugars are ubiquitous in nature where they function in a variety of biological processes, including cell adhesion, immune response, determination of ABO blood groups, fertilization, antibiotic function, and microbial pathogenicity.	7.74449e-173
NZ_CP011456.1\|WP_053540935.1\|5417235_5417748_+\|hypothetical-protein	gnl\|CDD\|377670	pfam06527, TniQ, TniQ. This family consists of several bacterial TniQ proteins. TniQ along with TniA and B is involved in the transposition of the mercury-resistance transposon Tn5053 which carries the mer operon. It has been suggested that the tni genes are involved in the dissemination of integrons.	1.34354e-10
NZ_CP011456.1\|WP_027403013.1\|5403048_5404086_-\|SDR-family-oxidoreductase	gnl\|CDD\|212494	cd08946, SDR_e, extended (e) SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	6.36196e-57
NZ_CP011456.1\|WP_053540932.1\|5411527_5412910_+\|response-regulator	gnl\|CDD\|381129	cd17602, REC_PatA-like, phosphoacceptor receiver (REC) domain of PatA and similar domains. Nostoc sp. (or Anabaena sp.) PatA is necessary for proper patterning of heterocysts along filaments. PatA contains phosphoacceptor REC domain at its C-terminus and an N-terminal PATAN (PatA N-terminus) domain, which was proposed in a bioinformatics study to mediate protein-protein interactions. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays. Some members of this group may have an inactive REC domain, lacking canonical metal-binding and active site residues.	1.54714e-35
NZ_CP011456.1\|WP_053540934.1\|5414323_5416246_+\|DDE-type-integrase/transposase/recombinase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	1.72638e-08
NZ_CP011456.1\|WP_053541394.1\|5423058_5423448_-\|type-II-toxin-antitoxin-system-VapC-family-toxin	gnl\|CDD\|226267	COG3744, COG3744, PIN domain nuclease, a component of toxin-antitoxin system (PIN domain) [Signal transduction mechanisms].	2.52057e-43
NZ_CP011456.1\|WP_053540922.1\|5395939_5397037_-\|glycosyltransferase	gnl\|CDD\|340833	cd03804, GT4_WbaZ-like, mannosyltransferase WbaZ and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. WbaZ in Salmonella enterica has been shown to possess mannosyltransferase activity.	1.93782e-125

>NZ_CP011456.1|WP_053540928.1|5405493_5406267_-|glucose-1-phosphate-cytidylyltransferase
MKAVILAGGLGTRLSEETSIRPKPMVEVGGKPILWHIMKTYSAHGINDFIICCGYKGYVIKEYFANYFLHMSDVTFDMRFNQMNVHSGYAEPWRVTLVNTGDNTMTGGRLKQVREHIGNETFCFTYGDGVSNINITELIKFHREQKTLATLSAVQPAGRFGAISLGQEQTKITSFKEKPEGDGAWINGGYFVLEPQVIDFIADTSTVWEKEPLEKLADLEQLAAYKHDGFWQPMDTLRDKNYLEELWKSGKAPWQVW
>NZ_CP011456.1|WP_053540927.1|5404217_5405429_-|L-2-hydroxyglutarate-oxidase
MYDFAIIGGGIVGLSTAMALGERYPHAKILVLEKESEWAFHQTGNNSGVIHSGIYYKPGSFKAQFSRDGSRSMVEFCQKYDIDHEVCGKVIVASNQQELPRLENLYTRGLENGIPVKRISPEEVKEIEPHVSCVGGVQVFSTGIVNYKQVCLKYAELIRNQGGDLRLNTQVLKIVRSGRNQVLETNNGRFETRFVINCAGLHSDRIAKLGKANPEAKIVPFRGEYYELTPEKRYLVKTLIYPVPNPDFPFLGVHFTRMIDNTVHAGPNAVLSLKREGYKKTDFDFRDFAEVITYPGFWKLAAKHADEGIQEIIRSFSKAAFVKSLQKLIPEIQAADVIPTHAGVRAQALMNNGSLVDDFLIIAGENSIHVCNAPSPAATSSLEIGKAIVKQIPEPTHLHSLVS
>NZ_CP011456.1|WP_027403013.1|5403048_5404086_-|SDR-family-oxidoreductase
MKVLVTGTEGYLGSLLPSLLMQKGHEVIGVDTGFYKVGWLYNGTNVTAKTLNKDIRDINPEDLEGVEAIVHMAELSNDPTGQLSPTITYDINHLGSVRLANLAKSVGVRRFVYMSSCSVYGVASEGDITESSPVNPQTAYAECKTLVERDVQPLADDDFSPTFMRNATAFGASPRMRFDIVLNNLAGLAWTTKEIKMTSDGTPWRPLVHALDICKAIVCALEAPRDIIHNQIFNVGDTANNYRVKEIAEIVADVFPGCQLSFGTNGSDNRSYRVSFEKINTILPGFKCDWNAQLGAGQLFSLFKQIDMNEDTFLSRGFTRLKQLEYLIRTEQIDKDFFWNKQENY
>NZ_CP011456.1|WP_053540926.1|5401864_5402833_-|glycosyltransferase-family-2-protein
MQKLLTIAIPTYNRAALLDKQLAWLATAIKGFESECEIIISDNCSTDNTPGVVKKWQTAFSNTVFIANRNRENIGLMPNIAFCLQAAGSKYVWTVGDDDPIQERTLGYVINKIKENPSLSLMFLNCCGRDKNTNKVLVEHWFPSDSDEIIVDSKPVFQRYLQGSFGGVLFMTATIYNTELVQQALQNWTTSCKNLASQAYWTGFCAAYGNIIVTQDNYLECTMHASSLEENPRWSLMMRYVYIPEIYLKLLSLGYSAKFCQRMILENIFNLSDWKILLGALRRWPVLATNIIITYLQLVGRFIYQMNFNQKKSAINISRISN
>NZ_CP011456.1|WP_053540925.1|5400811_5401825_-|glycosyltransferase-family-2-protein
MNKLLTIAIPTYNRAELLDKQLTWLSQAIQGFESECEILVSDNCSTDHTQSIISKWQNILTNITFKSNKNPENIGVMRNIFHCLSSATTKYVWTIGDDDPIQERAVAYVMDKIKNIDDLSLLFLNFSGRNKITGEPVHPPKIVGNRWFDADTEDGEGDGKAIFEHCFTKSVGAVIFLTATVYRADLIKRALQIWPTASNNWISLAYLAGYCAANGRVIVTKDIYLECIVGVSYWQKEPKSALLMQYQHIPEVILKLEQVGYSKAYCCRMLLQNYHEVDLKVFLGAMRRWPVSAIKTVIPFLGLASVAALELIPMREFKVAESEMDRTTTSEVRNYKG
>NZ_CP011456.1|WP_039204092.1|5400575_5400761_-|hypothetical-protein
MINKVAEKISVLKDELAYQVKLWQHQGNLPVLTGNDAIAVIARMQYSLGRRPCAPTGFTIS
>NZ_CP011456.1|WP_053540924.1|5399434_5400259_-|phytanoyl-CoA-dioxygenase
MLNKISTISSELNYRVSLWHHGKNLPAISAKDQLIVDTLKTSGVYITSLEDLGFSSTATMLATANSCTDRMVNPRDIHAGYKLPQIYTVTDLPEFFNWGMESRLQNIIEHYIGLPIAFHGVHVRKDFPNEKQLETLLWHKDSEDRRMIKVIIYLNDVTEEHGPFEYIRLPTNALEQVKNYQVDYELWRVNFLGINDDKMMKVIPKSAWKSCPGKAGTVIFADVRNILHHGTVRTQERSTIFFTYTAKSPKRPELCTQYHDDTFPKINPQLGLKV
>NZ_CP011456.1|WP_039204310.1|5398609_5399155_-|dTDP-4-dehydrorhamnose-3,5-epimerase
MIFTSTKLAGAFIIDLEEKPDSRGFFARTFCADEFLAHGLKPTVAQCNLSFNHKKGTLRGMHYQTLPAAETKLIRCTQGAIYDVIVDMRPESPTYLAHIGVELSAENRRALYVPEMFAHGYQALTDGAEVVYQVGEFYTPGYERGLRYDDPILEISWPLSATEMSDKDRNWPLLESILIGV
>NZ_CP011456.1|WP_053540923.1|5397293_5398607_-|NAD(P)-dependent-oxidoreductase
MIIVDKALQARADLGKPVKVAMIGAGFMGRGIANQIINSVPGMELVAISNRHIDNAKRAYLEAGIEDIKIVTNLADLEEAIAQNEYAITEDAMLLCEADGIDAIIEVTGTIEYAAHLVMCAIAHHKHIILMNAELDGTIGPILKVHADRAGVILSACDGDQPGVEMNLYRFVKSIGLKPLLCGNIKGLQDPYRNPTTQAGFAQRWGQNPAMVTSFADGTKISFEQAIVANGTGMKVAKRGMLGYDYTGHVDEMTKMYDIDQLQELGGIVDYVVGTKPGPGVFVFATHEDPKQRHYLNLYKLGEGPLYSFYTPYHLCHFEVPLSVARAVLFHDAVLAPIAGPVVDVVTTAKIDLQAGATLDGIGYYMTYGQCENSPIVQQQNLLPMGLAEGCRLKRDIPKDQVLTYDDVELPEGRLCDQLRAEQAVYFAPVKTLALTK
>NZ_CP011456.1|WP_053540922.1|5395939_5397037_-|glycosyltransferase
MKIALVHDYLTQRGGAERVFELLCKRYPDADIFTSLYDPQKSIDLGERIINTTFLQKIPGATKYFRMLAPLYFPAFRSLDLQDYDLIISSSTSFAKAVRKNPQAKHICFCHNVTRFLWDTETYLREYGDYRYFAPLIEKIFQMMRDVDLKYAQEPDLYIANSTIVAQRIQKIYHKQAIAINYPIDTSNFVFSDTKEEYYLASARMISYKRLDIIVEAFNWLGWNLLISGDGPEQERLKAQALPNIQFLGHVSDRERKDLFSKAKSIIVAALEDYGLVPVEANASGTPVIAYGAGGVLDTQIPGKTGVFFKRQAPCSLQAALLEAGGISWDYETIRNHAVSNFSEQSFFSKVEQVIDQASSSSNLF
>NZ_CP011456.1|WP_053540930.1|5407175_5409371_-|tetratricopeptide-repeat-protein
MQVLRHLPNPEILNLSVSVGHGGEACIYAVPSDENLVAKVYHKPTVSYAQKLRAMLANPPVNPTDNLGHISIAWPQELLQAADGSGKVVGFVMPRIRGMRPIMDFYNPGIRRQHCPLFNYQYLLRTARNLAAAFSALHASRYCVGDVNESNILVSDTALVTLVDTDSFQVTEPLQNVVYRCSVGKPEYTPPELQNKTFADYDREIHHDLFGLAVLIFQLLMEGTHPFSGIFQGAVDPPTYQGRILSGHFTYSQKKQVPYLPTPISPSWNLLHPSLRDLFVRCFEDGHDQPLLRPNAQTWLSALTAVEESLMICQVNLQHLYHNHLDKCPWCERTKRLGGRDPFPSLLAIASKQHLQPRAQPKSKRRYIPTPRITQPLTPNSPVYHWQPIANQQFYHPPAGKKLNRKVYGVICGVMGLGLLGYLDVMIKFTRPFVSQNPYTQQSLMSRTSNQTADLPSLSFADYYQRGDTAYHQKDYEEAVANFTEATKKNPQSAKGYINLGNAQYNLNNYEAALANYNQALKLNPQEVKAYINRGNAYYMLADYSSDPDKEYKQAIADFNAAINIDKTDAEAYVRRGIVRFEITKYINNSFPEYQRSIADFTEAIKLNSAKIDAYFQRGLVRYQMAQYSSNYATEYKQAIADFTEALKLNPRLAKGYLKRGMAYYELAQYREGIADKNHVQAVADLETAAKVSLEQNDMDNYQQSLSSICIVVANKCDSLLSNTILTGQSN
>NZ_CP011456.1|WP_053540931.1|5409473_5410256_-|protein-phosphatase-2C-domain-containing-protein
MNTSKQISQWRVVAASVCGTSHSKNQQLCQDAHHWQLLANNVLVIAAADGAGSAKLGKVGSMIAVETAIDHLSRQEITSDSLANDGVLRYLLSDAMLVARKAIEIEADVCNHQPHDLATTLILMIATPEIVAVGQVGDGLAVAKNSMGNLIALTIPSNGEYINQTTFLTSPGALETAQFEICREEIVNVGVLTDGLQMLALNMIVGEPHKPFFFPLFQFVANAEDKILAKEHLMRFLSSDKITQRTDDDLTLILAAFINS
>NZ_CP011456.1|WP_039204101.1|5410308_5410983_-|VWA-domain-containing-protein
MIDTFNLDEVVEFAENPEPRCPCVLLLDTSGSMQGERIEALNQGLLSLKDELVKNSLASRRVEVAIITFDSNVNVVQDFVTADQFNPPILTAQGLTIMGSAIHKALDIIQERKSQYRTNGIAYYRPWVFMITDGEPQGELDHVVEQAAQRLQGDESNKRVAFFTVGVENANMSRLSQIAVRSPLKLKGLNFIEMFVWLSASMSAVSHSQVDEQVALPPIGWGSV
>NZ_CP011456.1|WP_053540932.1|5411527_5412910_+|response-regulator
MKNTGTFTKLSPQGLLRQLSNCYETTRLQAHSNSVSWLIYIEQGKIIYGTHSVEPFDRLERQMRRLHPQIPLVDNEVRVQMRLIFEPEDNHHLPNQIPEYEAINWLVNEQYLLLDHATLLIQELVKEVIESFLLIKTGDFELTEPLENFTEICKLDIDDIIEKCQNQLQNWRYLGRYISSPYQRPYLLVSSKFQDKRLPPLKENITNWMKGFSLRHLAIIMNQDELQLALSLYPYIVKGSIVLHEPDPPFDKLPKTCGSSLLFSEDSTELIRGKLFVADVAPSQDASSETPIISRNHLAVQQLVPDVADLPPEDFSPEAVNSNIEVDSQKVKINTKITQKTYKIISVDDSPTILKEISRYLEDENFTLVTINEPVKAVMSIIRHKPDLILLDLNMAGIDGYELCKIIRNNSLFKTIPIIFVTSNKGIIDKVKARFVGASGYLTKPFTRAELLKMIFMHLA
>NZ_CP011456.1|WP_053540933.1|5413430_5413694_-|hypothetical-protein
MMKHYILNLNPTAKHEWDRCIIRDPLTAKRPDIAKIISEAVGADTGSYLVSVNIEVTVLQEAPSPSPEQLSLPFPEISVPTPLREAA
>NZ_CP011456.1|WP_053540934.1|5414323_5416246_+|DDE-type-integrase/transposase/recombinase
MPKKPINKAFPGFETQEEDGVEDKNLLVNEDSPEYLRKVELIDAILQAPDKIARRNAIADAAKALGKSTRTIKRMIEKVEQVGVATLAVGRKDKGQYRISKEWHDFIVSLHKWGNREGSRINHNQISGYLKALGSQGEKLQEKKYDEKFKGYSQVREDLITGKYPSHVTVYKVINSYLEEKHNKVRHPGSPIEGQILQTTEGILEITHSNQIWQIDHTRLDILLIHEEDKKVIGRPYITLVMDSYSGCVTGFYLGFEPAGSHEVGLALRHAILPKHYETEYQLQERWEICGIPEYIMTDRAKEFKSEHLKQVSLQLGFIRRLRAFPQAGGLIESIFDKINKETLSLYGGYTGSNIEERPPEAERTACLTLDKLEQILVKYFVDHYNRHDYPRAKNQKRIERWKSSCLLEEPELIDERELDICLMKIAYRNVEKYGSVNFLGWIYQGDCLLDYERKQVSLRYDKRNITTVIAYTRPINGEPGEFLGFIQARDFKRERMSLAELNYIKKKLRNEGKEVDKSSILNERLSIFEDVEQNRKERRRRRRKEAQQKHEVKTNKSKVVELFPENEIPETIEPPEEIKTAQENLISPIDTVSQNIVNSIDKQVEQSQRDTNQTNQTAKAKRRPRVGTKDWNQFMRDNW
>NZ_CP011456.1|WP_053540935.1|5417235_5417748_+|hypothetical-protein
MEQETVQHPPWYIEPYVGESISHYFGRFRRNEAISVSSPGSLSKAAGIGPVLARWEKFRFNPFPSQKELEAISKLIGLDTNRITQMLPPKGEKMKLEPIRLCAACYAEQPYHRLEWQFQSTVGCDRHKLRLLSECPFCGERFAIPALWEHGECNKCHAPFKSMKKRQKSY
>NZ_CP011456.1|WP_053540936.1|5418027_5418672_+|hypothetical-protein
MVRAIGFRVEPQTVNYAVVEGTKQQPILIFQDKMSPPNSYDKESSQLVWYRERLLTIIEEYQPQFAAIRLPEPSSFKTANKDSLLKRARIEGVILEGLGKKGIECMVAALTTISKKRYSSAIELADALARVTIPLDWNTQFSPNGEIFWKASQGKQKSDLVVELVKGVENLWNVNVFTENQGNRRKKSQHCKQGLTRSHAETHLENTFTSLSLA
>NZ_CP011456.1|WP_053540937.1|5419213_5419918_-|M48-family-metallopeptidase
MQQITVGELVIDVVRKNIKNLHLAVYPPDGRVRIATPLNLDDESVRLFAISKLAWIKKHQKNFQSQERQSPREFVSGESHYFQGKRYLLNVIYYLGTPKVEVRNNTYIDLYVREGSNEAQRQQVMMSWYRQQLKQEIPPLIAKWEKNIGVTVNEWGVKLMKTKWGTCNIEAKRIWLNLELAKKDKQCLEYVVVHEIVHLLERNHGDRFEALMNKFLPNWKLYKDELNRSPLGSY
>NZ_CP011456.1|WP_053541394.1|5423058_5423448_-|type-II-toxin-antitoxin-system-VapC-family-toxin
MKLLLDTHIWLWYLLGNERLSTQLQTTIPAATTELWLSPISIWETLLLAEKGRISLQPNPVAWVDLALNTLEIREASLNHHIAILSRQIELPHQDPGDRFIAATAVYYQLTLATVDTNLTGSSWLQTLS

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Crispr_ID: NZ_CP011456_46

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011456_46

5672195-5672313

Orphan

Consensus_repeat	Method
CCAAACAGCGATTCCTGCGGAGCGCAACGCTTACGCATTCCCAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP011456_46

>merge|NZ_CP011456|46|5672195-5672313|CRISPRCasFinder
CCAAACAGCGATTCCTGCGGAGCGCAACGCTTACGCATTCCCAACATCCCAAACAGCGATCTCATTCCCATACCCCCAAACAGCGATTCCTGCGGAGCGCAACGCTTACGCACTCCCAA

>NZ_CP011456|46|45|5672195-5672313|CRISPRCasFinder
CCAAACAGCGATTCCTGCGGAGCGCAACGCTTACGCATTCCCAA	CATCCCAAACAGCGATCTCATTCCCATACCC
CCAAACAGCGATTCCTGCGGAGCGCAACGCTTACGCACTCCCAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011456.1\|WP_053541114.1\|5673761_5674040_-\|Killer-protein	unknown	unknown	gnl\|CDD\|226079
NZ_CP011456.1\|WP_053541118.1\|5675949_5676747_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053541120.1\|5678067_5678643_-\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|368559
NZ_CP011456.1\|WP_053541119.1\|5676760_5677936_-\|DNA-cytosine-methyltransferase	unknown	unknown	gnl\|CDD\|223348
NZ_CP011456.1\|WP_053541113.1\|5673371_5673683_-\|HigA-family-addiction-module-antidote-protein	unknown	unknown	gnl\|CDD\|225635
NZ_CP011456.1\|WP_053541121.1\|5678803_5682790_-\|magnesium-chelatase-subunit-H	unknown	unknown	gnl\|CDD\|237117
NZ_CP011456.1\|WP_053541412.1\|5671136_5671424_+\|type-II-toxin-antitoxin-system-Phd/YefM-family-antitoxin	unknown	unknown	gnl\|CDD\|376852
NZ_CP011456.1\|WP_053541110.1\|5671736_5672135_+\|PIN-domain-containing-protein	unknown	unknown	gnl\|CDD\|350220
NZ_CP011456.1\|WP_053541109.1\|5670408_5670651_+\|transcriptional-regulator	unknown	unknown	unknown
NZ_CP011456.1\|WP_053541115.1\|5674241_5674463_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053541104.1\|5664970_5665441_+\|M67-family-metallopeptidase	unknown	unknown	gnl\|CDD\|163701
NZ_CP011456.1\|WP_053541107.1\|5668045_5668846_+\|endonuclease/exonuclease/phosphatase-family-protein	unknown	unknown	gnl\|CDD\|197317
NZ_CP011456.1\|WP_053541105.1\|5665474_5666647_+\|molybdopterin-synthase-adenylyltransferase-MoeB	unknown	unknown	gnl\|CDD\|180967
NZ_CP011456.1\|WP_027402785.1\|5670656_5670986_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl\|CDD\|368240
NZ_CP011456.1\|WP_053541116.1\|5674990_5675203_-\|type-II-toxin-antitoxin-system-HicB-family-antitoxin	unknown	unknown	gnl\|CDD\|224514
NZ_CP011456.1\|WP_053541413.1\|5671496_5671730_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053541117.1\|5675204_5675453_-\|type-II-toxin-antitoxin-system-HicA-family-toxin	unknown	unknown	gnl\|CDD\|377942
NZ_CP011456.1\|WP_053541106.1\|5667116_5667833_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP011456.1\|WP_053541112.1\|5672799_5673381_-\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|368559
NZ_CP011456.1\|WP_081424331.1\|5669202_5669481_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225995

Protein	Function_ID	Function_description	E-value
NZ_CP011456.1\|WP_053541114.1\|5673761_5674040_-\|Killer-protein	gnl\|CDD\|226079	COG3549, HigB, Plasmid maintenance system killer protein [General function prediction only].	4.33916e-24
NZ_CP011456.1\|WP_053541120.1\|5678067_5678643_-\|Uma2-family-endonuclease	gnl\|CDD\|368559	pfam05685, Uma2, Putative restriction endonuclease. This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. A small number of member proteins also contain pfam02861 domains that are involved in protein interactions. Solutions of several structures for members of this family show that it is likely to be acting as an endonuclease.	1.75796e-53
NZ_CP011456.1\|WP_053541119.1\|5676760_5677936_-\|DNA-cytosine-methyltransferase	gnl\|CDD\|223348	COG0270, Dcm, Site-specific DNA methylase [DNA replication, recombination, and repair].	8.00848e-91
NZ_CP011456.1\|WP_053541113.1\|5673371_5673683_-\|HigA-family-addiction-module-antidote-protein	gnl\|CDD\|225635	COG3093, VapI, Plasmid maintenance system antidote protein [General function prediction only].	1.72007e-25
NZ_CP011456.1\|WP_053541412.1\|5671136_5671424_+\|type-II-toxin-antitoxin-system-Phd/YefM-family-antitoxin	gnl\|CDD\|376852	pfam02604, PhdYeFM_antitox, Antitoxin Phd_YefM, type II toxin-antitoxin system. Members of this family act as antitoxins in type II toxin-antitoxin systems. When bound to their toxin partners, they can bind DNA via the N-terminus and repress the expression of operons containing genes encoding the toxin and the antitoxin. This domain complexes with Txe toxins containing pfam06769, Fic/DOC toxins containing pfam02661 and YafO toxins containing pfam13957.	1.52759e-10
NZ_CP011456.1\|WP_053541110.1\|5671736_5672135_+\|PIN-domain-containing-protein	gnl\|CDD\|350220	cd09872, PIN_Sll0205-like, VapC-like PIN domain of Sll0205 protein and homologs. Virulence associated protein C (VapC)-like PIN (PilT N terminus) domain of the Synechocystis sp. (strain PCC 6803) Sll0205 protein and other uncharacterized homologs are included in this subfamily. They are similar to the PIN domains of the Mycobacterium tuberculosis VapC and Neisseria gonorrhoeae FitB toxins of the prokaryotic toxin/antitoxin operons, VapBC and FitAB, respectively, which are believed to be involved in growth inhibition by regulating translation. These toxins are nearly always co-expressed with an antitoxin, a cognate protein inhibitor, forming an inert protein complex. Disassociation of the protein complex activates the ribonuclease activity of the toxin by an, as yet undefined mechanism. The PIN domain belongs to a large nuclease superfamily. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	1.52873e-14
NZ_CP011456.1\|WP_053541121.1\|5678803_5682790_-\|magnesium-chelatase-subunit-H	gnl\|CDD\|237117	PRK12493, PRK12493, magnesium chelatase subunit H; Provisional.	0
NZ_CP011456.1\|WP_053541104.1\|5664970_5665441_+\|M67-family-metallopeptidase	gnl\|CDD\|163701	cd08070, MPN_like, Mpr1p, Pad1p N-terminal (MPN) domains with catalytic isopeptidase activity (metal-binding). This family contains archaeal and bacterial MPN (also known as Mov34, PAD-1, JAMM, JAB, MPN+)-like domains. These domains contain the signature JAB1/MPN/Mov34 metalloenzyme (JAMM) motif, EXnHS/THX7SXXD, which is involved in zinc ion coordination and provides the active site for isopeptidase activity for the release of ubiquitin from ubiquitinated proteins (thus having deubiquitinating (DUB) activity) that are tagged for degradation. The JAMM proteins likely hydrolyze ubiquitin conjugates in a manner similar to thermolysin, in which the zinc-polarized aqua ligand serves as the nucleophile, compared with the classical DUBs that do so with a cysteine residue in the active site.	1.17784e-48
NZ_CP011456.1\|WP_053541107.1\|5668045_5668846_+\|endonuclease/exonuclease/phosphatase-family-protein	gnl\|CDD\|197317	cd09083, EEP-1, Exonuclease-Endonuclease-Phosphatase domain; uncharacterized family 1. This family of uncharacterized proteins belongs to a superfamily that includes the catalytic domain (exonuclease/endonuclease/phosphatase, EEP, domain) of a diverse set of proteins including the ExoIII family of apurinic/apyrimidinic (AP) endonucleases, inositol polyphosphate 5-phosphatases (INPP5), neutral sphingomyelinases (nSMases), deadenylases (such as the vertebrate circadian-clock regulated nocturnin), bacterial cytolethal distending toxin B (CdtB), deoxyribonuclease 1 (DNase1), the endonuclease domain of the non-LTR retrotransposon LINE-1, and related domains. These diverse enzymes share a common catalytic mechanism of cleaving phosphodiester bonds. Their substrates range from nucleic acids to phospholipids and perhaps, proteins.	2.87981e-92
NZ_CP011456.1\|WP_053541105.1\|5665474_5666647_+\|molybdopterin-synthase-adenylyltransferase-MoeB	gnl\|CDD\|180967	PRK07411, PRK07411, molybdopterin-synthase adenylyltransferase MoeB.	0
NZ_CP011456.1\|WP_027402785.1\|5670656_5670986_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl\|CDD\|368240	pfam05016, ParE_toxin, ParE toxin of type II toxin-antitoxin system, parDE. ParE is the toxin family of a type II toxin-antitoxin family. It is toxic towards DNA gyrase, but is neutralized by the antitoxin ParD. The family also encompasses RelE/ParE described in.	5.77305e-12
NZ_CP011456.1\|WP_053541116.1\|5674990_5675203_-\|type-II-toxin-antitoxin-system-HicB-family-antitoxin	gnl\|CDD\|224514	COG1598, COG1598, Predicted nuclease of the RNAse H fold, HicB family [General function prediction only].	6.35284e-15
NZ_CP011456.1\|WP_053541117.1\|5675204_5675453_-\|type-II-toxin-antitoxin-system-HicA-family-toxin	gnl\|CDD\|377942	pfam07927, HicA_toxin, HicA toxin of bacterial toxin-antitoxin,. HicA_toxin is a bacterial family of toxins that act as mRNA interferases. The antitoxin that neutralizes this is family HicB, pfam15919.	0.000289727
NZ_CP011456.1\|WP_053541106.1\|5667116_5667833_+\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	3.04491e-84
NZ_CP011456.1\|WP_053541112.1\|5672799_5673381_-\|Uma2-family-endonuclease	gnl\|CDD\|368559	pfam05685, Uma2, Putative restriction endonuclease. This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. A small number of member proteins also contain pfam02861 domains that are involved in protein interactions. Solutions of several structures for members of this family show that it is likely to be acting as an endonuclease.	1.50852e-38
NZ_CP011456.1\|WP_081424331.1\|5669202_5669481_-\|hypothetical-protein	gnl\|CDD\|225995	COG3464, COG3464, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	5.99078e-24

>NZ_CP011456.1|WP_053541110.1|5671736_5672135_+|PIN-domain-containing-protein
MKYVLDTHALIWFLEGNLKLGPNAKVILCDPNSQLVIPATTLAEAVWIVERGRTSIPTPKDVILAVEADPRVVIYPLDQDVIEMTMNLSAINEMHDRQIAATVLVLASKGEVVRLLTCDKNITTSGLVAIVW
>NZ_CP011456.1|WP_053541413.1|5671496_5671730_+|hypothetical-protein
MLQAIEGIYKDGKVELKELPSDISESFVIVTFLKSKKNHKKDQIMLFGMFSGNQQSTEADFEIAEFHGDSEDSLDWS
>NZ_CP011456.1|WP_053541412.1|5671136_5671424_+|type-II-toxin-antitoxin-system-Phd/YefM-family-antitoxin
MFSLSDIHPLSEFQRGAKMFLDKLKETKSPIVLTVNGKAAAVVQDAESYQKMIDRLELLESVAKIRQSINEFEQGEGMPLNQAFAEFKEKYGIPD
>NZ_CP011456.1|WP_027402785.1|5670656_5670986_+|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MAFQVIVRNRATQDIRQQANYILVNGNRESGEKFLEFVESAFAQLAITPNMGKVVLSLSDMGTIRQWRIKNFKDYLIFYKVQEEQVEVLRVLHGARDLEDLLPFLDEEV
>NZ_CP011456.1|WP_053541109.1|5670408_5670651_+|transcriptional-regulator
MNVSFPIPKELESYLEVQLQSGNYDTVADYFLMLLQQDQRRKDAQAKLASLLQEGLDSEAEPVTPEYWQDLRRSVFGKAQ
>NZ_CP011456.1|WP_081424331.1|5669202_5669481_-|hypothetical-protein
MQRKSTKSWGKSIINLLDWMHNGLSYFPKSIGTMIRWFGEVVGYFDGRTTSGTVEGINNKLKLIKRLGYGFRNFSNFRLRSLLNWHFSINSP
>NZ_CP011456.1|WP_053541107.1|5668045_5668846_+|endonuclease/exonuclease/phosphatase-family-protein
MQITVMTFNLRYDKPDPGVRQWKKRVGAIASLIQHYKPDLLGTQEGKSHQLADLQALLPEYNIIGGDRTGTGTGEHCAIFYNPQCLKLQETQDFYLSDTPEIPGSITWGTRLPRMATWANFEVANPGLSLTILNTHLDHENAKSRELSAALISQRLAEFPLKNYLLLTGDFNANPGTLERQIFLSPLANGKQLQDPLETLPLEQQKTFHNFTGQAWDAIDTIYCDRCADQRYRSFSVEQVIIDRQQWEGVWPSDHFPVIVKLTIVS
>NZ_CP011456.1|WP_053541106.1|5667116_5667833_+|response-regulator-transcription-factor
MDTLSTTKSKILIVDDDVSVRNLIQRFLSRKYEIESAADGKTALVAFEKLNPALVILDWNLPDANGYKLCQEMQSRTNALVMMLTSRNDEADKIKVLAAGADDFLTKPFSLAEVEVRVEALLRRVRYIQPSVSQRLTFNQLSINSEAREVTLNNKALPLTALEFNILHFLATHPRQAWSRTQLIQKIWGCDYVGDGRVVDVHIGQLRKKMEADSSMPEFIKTVRGYGYKFDPPENTTV
>NZ_CP011456.1|WP_053541105.1|5665474_5666647_+|molybdopterin-synthase-adenylyltransferase-MoeB
MLNPNLDEIQLTKDDYERYSRHLILPEVGMEGQKRLKAASVLCIGTGGLGSPLLLYLAAAGIGRIGIVDFDVVDTSNLQRQVIHGTSWVGKPKIESAKNRIHEINPHCQVDLYETRLSAENALDIIRPYDIVVDGTDNFPTRYLVNDACVLLDKPNVYGSIFRFEGQATVFNYEGGPNYRDLYPEPPPPGMVPSCAEGGVLGILPGMIGIIQATETVKIILGNGTTLSGRLVLYNALDMKFRELKLRPNPIRPVIDKLIDYEQFCGIPQAQAEEAKQQMEIQEMTVKELKALLDGGAKDFVLLDVRNPHEYEIARIPGSVLVPLPDIENGDGVAKVKELLNGHRLIAHCKLGGRSAKALAILKEAGITGTNVKGGINAWSQEVDASVPQY
>NZ_CP011456.1|WP_053541104.1|5664970_5665441_+|M67-family-metallopeptidase
MNLQLKTNHIEIIKNHAQKTYPDECCGLILGYKNSEYKIVVEIIPTENVWNTEKGNFTEDQKHSTSRRYAISPQVMLHTQKAARNRNLNIIGIYHSHPDSPAIPSEWDRIYAWTEYSYVILSVQNTQASELQSWTLDDNHQFQSETIKLIKLANLS
>NZ_CP011456.1|WP_053541112.1|5672799_5673381_-|Uma2-family-endonuclease
MGLEFITLYLPPSIQITDDQFFEICQINELIKIERNADGSLLLKPLLGGITGNINSGLTAQLANWNDDKSQGVVFGSDVGFILPNGAIRSPNAAWVKLERWNNLTDEEKQKFPPICPDFVIELLFSSDSLKTTQEKMKEYIDNGVRLGILINWKSRQVEIYIPGKEVEVLKSPATVSGEDVLKGFVLNLGMIW
>NZ_CP011456.1|WP_053541113.1|5673371_5673683_-|HigA-family-addiction-module-antidote-protein
MNNLQDITQDRLVRPIHPGEIIADILDDLDINPSNFAEILGVSNQTIQEIINGEKSITVDIAIRLGKALGNGHRLWLNLQQKVDVWDALQSHKEEYEQVMTLV
>NZ_CP011456.1|WP_053541114.1|5673761_5674040_-|Killer-protein
MIQTFKSKALQNLFRENFNKGVPANLEKKIRIRLEVIDSALMVDDIKLPGYDLHELKGDRKGTWSIKVSGNWRITFKFEDGDAYDVNLEDYH
>NZ_CP011456.1|WP_053541115.1|5674241_5674463_+|hypothetical-protein
MSNYQELLQQAKNLTPEEQLKLVENLSILIRQQLKMTSKPKRSILELRGLGKEIWGNIDAQEYINQERDSWNG
>NZ_CP011456.1|WP_053541116.1|5674990_5675203_-|type-II-toxin-antitoxin-system-HicB-family-antitoxin
MTLRYEINLYWSEQDQAFIAEVPDLPGCAADGETYQEALQNIEIIMQEWIETAQELGRKIPEPTQRLMSA
>NZ_CP011456.1|WP_053541117.1|5675204_5675453_-|type-II-toxin-antitoxin-system-HicA-family-toxin
MSQQDKLSAKILSGASDTNISFEQLCQLLIRLGFDERIRGSHHIFTKEGVEEILNLQPKQGKAKAYQVKQVREMLLKYQLGG
>NZ_CP011456.1|WP_053541118.1|5675949_5676747_+|hypothetical-protein
MSTELTAETLIPLSVQERKALILHHASLIDVTHIADEDLHIAYKYGKIISSIAPAYFQYQIAQDKQNGSVLELDRQSQLISSKTEKFADDFIEWLKLDFEKKNSIIEDHPNPSNLFELCGAKLLVTSNSVTRSLSTTMGSLWEKISNISPYIINPEFEFGIKITGIDILLFSEETVKFAQLKTLKGTLTGSQVPRAKKELSIHENSLFIAAFDLGKWTFSNRSNIPRIAGKPFWNMICMDYDLVENHIRDMLQKIDQAFAELATK
>NZ_CP011456.1|WP_053541119.1|5676760_5677936_-|DNA-cytosine-methyltransferase
MIDGKAISISLFTGAFGLDLGMEQAGFHTVSVVEKDRDATKTIALNRPFLQESAIPREIQNVSSQELLEEGGIVLNLGRALQPGEVDLVTGGPPCQPFSTAGKRGSVMDPRGSLFMDFVRIVKEVQPRFFLMENVKGLLSAPLRHRPINQRGKDYPPLEVDEIAGAALKVVLSEMKEIGYNIVYNLLEAADYGVPQNRARVVFIGSRDGEAATFPIPKYCKDGKILPKWRTLEDAITDLVDTEQEFMAYPESRLKYLRLLEAGQNWKHLPEELKQEAMGGAYNSGGGKVGFYRRLSWDKPSPTITTSPHQKATDMCHPVELRSLTVRESARIQTFPDDWIFYGSISSKYKQIGNAVPVLLAKELGSYLLNLIQGKKAKGKEISEQLSLFSL
>NZ_CP011456.1|WP_053541120.1|5678067_5678643_-|Uma2-family-endonuclease
MNALTVSLKSVIDMTDDQFFQLCQNNRELRFERNANGELIIMSPAGGETGNRNGRLNQQLFNWTDADGTGIAFDSSTGFKLPNGADRSPDASWIKLERWDALSDEEKQKFPPICPDFVIELLSPSDSLKTTQEKMKEYIDNGVRLGILINRKSRQVEIYRPGKEVEVLDSPATVSGEDVLKGFVLNLAMIW
>NZ_CP011456.1|WP_053541121.1|5678803_5682790_-|magnesium-chelatase-subunit-H
MFTQVKSTIRHIAPDDLRGRKLIKVVYVVLESQYQSALSQAVREINANHPSVAIEISGYLIEELRGTENYEELKRDIASANIFIASLIFIEDLAQKVVAAVEPHRDNLDVSVVFPSMPEVMRLNKMGSFSLAQLGQSKSVIANFMKKRKEKSGAGFQDGMLKLLRTLPQVLKFLPMEKAQDARNFMLSFQYWLGGSAENLENFLLMLADKYVLKGVEKESFAAAKYEAPVVYPDMGIWHPLAPTMFEDVREYLNWYSARKDISSNLKDPLAPCVGLVLQRTHLVTGDDAHYVAIVQELESLGARVLPVFAGGLDFSKPIEAYFYEPITKMQLIDAVVSLTGFALVGGPARQDHPKAIEALKRLNRPYMVALPLVFQTTEEWLDSDLGLHPIQVALQIAIPELDGAIEPIILSGKDGATGRAIALQDRVEIVAQRALKWANLRRKPKLDKKVAITVFSFPPDKGNVGTAAYLDVFGSIFEVLQGLRNNGYDVQDIPETPQELLEQVIHDAQAQYNSPELNIAYKMSVPEYEALTPYSQRLEENWGPPPGNLNSDGQNLLIYGKQFGNVFIGVQPTFGYEGDPMRLLFSRSASPHHGFAAYYTYLERIWGADAVLHFGTHGSLEFMPGKQMGMSGDCYPDQLIGSIPNLYYYAANNPSEATIAKRRSYAETISYLTPPAENAGLYKGLKELSELIASYQTLKDTGRGVSIVNSIMDKCRIVNLDKDIELPETDSKDMSSEERDNIVGSVYRRLMEIESRLLPCGLHVIGKPPSAEEAIATLVNIASLDRQEEEIQGLPGIIARSLGRTIEDIYRNNDAGILADVQLLQDITLATRAAVTALVQEQIDAEGRVIAVSKLNFFNMGRKEPWVESLHQSGYTKVDTSALKPLFEYLEFCLKQVCADNELGGLLQGLAGEYILPGPGGDPIRNPDVLPTGKNIHALDPQSIPTSAAVQSAKIVVDRLLERNRSENEGNWPETIACVLWGTDNIKTYGESLAQIMWMIGVRPVPDALGRVNKLELIPLSELGRPRIDVVINCSGVFRDLFINQMNLLDQGVKMAAEADEPLEMNFVRKHALKQAEDMGINLRQAATRVFSNASGSYSSNINLAVENSTWDSEAELQEMYLKRKSFSFNSDNPGVMDESREIFETTLKTADATFQNLDSSEISLTDVSHYFDSDPTKLVASLRADGKKPASYIADTTTANAQVRSLSETVRLDARTKLLNPKWYEGMLSHGYEGVRELSKRLVNTTGWSATAGAVDNWVYEDTNETFIKDEEMQKRLMNLNPHSFRKIVSTLLEMNGRGYWETSEENLDRLRELYQEVENRIEGIE

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Crispr_ID: NZ_CP011456_47

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011456_47

5684414-5684519

Orphan

Consensus_repeat	Method
TGCGATAGCGAAGCGCTCCGTAGGAATCGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP011456_47

>merge|NZ_CP011456|47|5684414-5684519|CRISPRCasFinder
TGCGATAGCGAAGCGCTCCGTAGGAATCGCTTAAAATTAGGGGGTTGTGAGCGATCGCTGTTTGGGGATGTTGGGGTGCGATAGCGAAGCGCTCCGCAGGAATCGC

>NZ_CP011456|47|46|5684414-5684519|CRISPRCasFinder
TGCGATAGCGAAGCGCTCCGTAGGAATCGC	TTAAAATTAGGGGGTTGTGAGCGATCGCTGTTTGGGGATGTTGGGG
TGCGATAGCGAAGCGCTCCGCAGGAATCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011456.1\|WP_053541118.1\|5675949_5676747_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053541120.1\|5678067_5678643_-\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|368559
NZ_CP011456.1\|WP_053541128.1\|5690174_5690717_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053541119.1\|5676760_5677936_-\|DNA-cytosine-methyltransferase	unknown	unknown	gnl\|CDD\|223348
NZ_CP011456.1\|WP_053541115.1\|5674241_5674463_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053541114.1\|5673761_5674040_-\|Killer-protein	unknown	unknown	gnl\|CDD\|226079
NZ_CP011456.1\|WP_053541125.1\|5686844_5687243_+\|type-II-toxin-antitoxin-system-VapC-family-toxin	unknown	unknown	gnl\|CDD\|350311
NZ_CP011456.1\|WP_053541126.1\|5688432_5688681_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053541124.1\|5686543_5686840_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274401
NZ_CP011456.1\|WP_053541129.1\|5690962_5691526_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053541123.1\|5685762_5686173_+\|PIN-domain-containing-protein	unknown	unknown	gnl\|CDD\|350324
NZ_CP011456.1\|WP_053541121.1\|5678803_5682790_-\|magnesium-chelatase-subunit-H	unknown	unknown	gnl\|CDD\|237117
NZ_CP011456.1\|WP_053541127.1\|5688974_5689193_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_081424332.1\|5684545_5684971_-\|PIN-domain-containing-protein	unknown	unknown	gnl\|CDD\|350263
NZ_CP011456.1\|WP_039199934.1\|5685565_5685760_+\|type-II-toxin-antitoxin-system-VapB-family-antitoxin	unknown	unknown	gnl\|CDD\|378324
NZ_CP011456.1\|WP_053541117.1\|5675204_5675453_-\|type-II-toxin-antitoxin-system-HicA-family-toxin	unknown	unknown	gnl\|CDD\|377942
NZ_CP011456.1\|WP_053541122.1\|5683292_5683907_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053541113.1\|5673371_5673683_-\|HigA-family-addiction-module-antidote-protein	unknown	unknown	gnl\|CDD\|225635
NZ_CP011456.1\|WP_027402764.1\|5684943_5685219_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053541116.1\|5674990_5675203_-\|type-II-toxin-antitoxin-system-HicB-family-antitoxin	unknown	unknown	gnl\|CDD\|224514

Protein	Function_ID	Function_description	E-value
NZ_CP011456.1\|WP_053541114.1\|5673761_5674040_-\|Killer-protein	gnl\|CDD\|226079	COG3549, HigB, Plasmid maintenance system killer protein [General function prediction only].	4.33916e-24
NZ_CP011456.1\|WP_053541120.1\|5678067_5678643_-\|Uma2-family-endonuclease	gnl\|CDD\|368559	pfam05685, Uma2, Putative restriction endonuclease. This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. A small number of member proteins also contain pfam02861 domains that are involved in protein interactions. Solutions of several structures for members of this family show that it is likely to be acting as an endonuclease.	1.75796e-53
NZ_CP011456.1\|WP_053541119.1\|5676760_5677936_-\|DNA-cytosine-methyltransferase	gnl\|CDD\|223348	COG0270, Dcm, Site-specific DNA methylase [DNA replication, recombination, and repair].	8.00848e-91
NZ_CP011456.1\|WP_053541117.1\|5675204_5675453_-\|type-II-toxin-antitoxin-system-HicA-family-toxin	gnl\|CDD\|377942	pfam07927, HicA_toxin, HicA toxin of bacterial toxin-antitoxin,. HicA_toxin is a bacterial family of toxins that act as mRNA interferases. The antitoxin that neutralizes this is family HicB, pfam15919.	0.000289727
NZ_CP011456.1\|WP_053541125.1\|5686844_5687243_+\|type-II-toxin-antitoxin-system-VapC-family-toxin	gnl\|CDD\|350311	cd18744, PIN_VapC4-5_FitB-like, uncharacterized subgroup of the PIN_VapC4-5_FitB-like subfamily of the PIN domain superfamily. The PIN_VapC4-5_FitB-like subfamily includes the Virulence associated protein C (VapC)-like PIN (PilT N terminus) domain of Mycobacterium tuberculosis VapC4 and VapC5 ribonuclease toxins of the VapBC toxin/antitoxin (TA) system, and Neisseria gonorrhoeae FitB toxin of the FitAB TA system. This subfamily belongs to the VapC-like family of the PIN domain nuclease superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	1.33487e-52
NZ_CP011456.1\|WP_053541124.1\|5686543_5686840_+\|hypothetical-protein	gnl\|CDD\|274401	TIGR03031, cas_csx12, CRISPR system subtype II-B RNA-guided endonuclease Cas9/Csx12. Members of this family of CRISPR-associated (cas) protein are found, so far, in CRISPR/cas loci in Wolinella succinogenes DSM 1740, Legionella pneumophila str. Paris, and Francisella tularensis, where the last probably is an example of a degenerate CRISPR locus, having neither repeats nor a functional Cas1. The characteristic repeat length is 37 base pairs and period is about 72. One region of this large protein shows sequence similarity to pfam01844, HNH endonuclease.	0.00737599
NZ_CP011456.1\|WP_053541123.1\|5685762_5686173_+\|PIN-domain-containing-protein	gnl\|CDD\|350324	cd18757, PIN_MtVapC3-like, uncharacterized subgroup of the VapC3-like nuclease subfamily of the PIN domain superfamily. The VapC3-like nuclease subfamily includes the Virulence associated protein C (VapC)-like PIN (PilT N terminus) domain of various Mycobacterium tuberculosis VapC toxins including VapC3, VapC11, VapC15, VapC21, VapC25, VapC28, VapC29, VapC30, VapC32, VapC33, VapC37, and VapC39. It belongs to the VapC-like family of the PIN domain nuclease superfamily. VapC is a PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include FitB toxin of the FitAB TA system, eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The structural properties of the PIN domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions; in some members, additional metal coordinating residues can be found while some others lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	1.41506e-73
NZ_CP011456.1\|WP_039199934.1\|5685565_5685760_+\|type-II-toxin-antitoxin-system-VapB-family-antitoxin	gnl\|CDD\|378324	pfam09957, VapB_antitoxin, Bacterial antitoxin of type II TA system, VapB. VapB is the antitoxin of a bacterial toxin-antitoxin gene pair. The cognate toxin is VapC, pfam05016. The family contains several related antitoxins from Cyanobacteria and Actinobacterial families. Antitoxins of this class carry an N-terminal ribbon-helix-helix domain, RHH, that is highly conserved across all type II bacterial antitoxins, which dimerizes with the RHH domain of a second VapB molecule. A hinge section follows the RHH, with an additional pair of flexible alpha helices at the C-terminus. This C-terminus is the Toxin-binding region of the dimer, and so is specific to the cognate toxin, whereas the RHH domain has the specific function of lying across the RNA-binding groove of the toxin dimer and inactivating the active-site - a more general function of all antitoxins.	6.14009e-05
NZ_CP011456.1\|WP_081424332.1\|5684545_5684971_-\|PIN-domain-containing-protein	gnl\|CDD\|350263	cd18696, PIN_MtVapC26-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC26 and related proteins. Mycobacterium tuberculosis VapC26 cleaves 23S rRNA in the Sarcin-Ricin Loop, it is inhibited by the cognate VapB26 antitoxin. This subfamily belongs to the VapC (virulence-associated protein C)-like nuclease family of the PIN domain-like superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include FitB toxin of the FitAB TA system, eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The PIN domain belongs to a large nuclease superfamily. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	2.6919e-14
NZ_CP011456.1\|WP_053541113.1\|5673371_5673683_-\|HigA-family-addiction-module-antidote-protein	gnl\|CDD\|225635	COG3093, VapI, Plasmid maintenance system antidote protein [General function prediction only].	1.72007e-25
NZ_CP011456.1\|WP_053541121.1\|5678803_5682790_-\|magnesium-chelatase-subunit-H	gnl\|CDD\|237117	PRK12493, PRK12493, magnesium chelatase subunit H; Provisional.	0
NZ_CP011456.1\|WP_053541116.1\|5674990_5675203_-\|type-II-toxin-antitoxin-system-HicB-family-antitoxin	gnl\|CDD\|224514	COG1598, COG1598, Predicted nuclease of the RNAse H fold, HicB family [General function prediction only].	6.35284e-15

>NZ_CP011456.1|WP_053541122.1|5683292_5683907_+|hypothetical-protein
MRTSGQIMLLEFLGDLLKIAFGADYYKLFTKRVNENDARNIFSVTDLAKKYPDFKDKVIEKAKSKIKKQSEGLDQKYEESITKKYMTFDQGLKLVKGLLDSVVSSGFGNTGITEKILSTFTSAVCTDGFLLFKEYHNSHKSQELYEIEESKDSDSFRLFYLHLDVEAEKIENFLYNESNTILKAEYKVIKFSNLQALLEWASDQ
>NZ_CP011456.1|WP_053541121.1|5678803_5682790_-|magnesium-chelatase-subunit-H
MFTQVKSTIRHIAPDDLRGRKLIKVVYVVLESQYQSALSQAVREINANHPSVAIEISGYLIEELRGTENYEELKRDIASANIFIASLIFIEDLAQKVVAAVEPHRDNLDVSVVFPSMPEVMRLNKMGSFSLAQLGQSKSVIANFMKKRKEKSGAGFQDGMLKLLRTLPQVLKFLPMEKAQDARNFMLSFQYWLGGSAENLENFLLMLADKYVLKGVEKESFAAAKYEAPVVYPDMGIWHPLAPTMFEDVREYLNWYSARKDISSNLKDPLAPCVGLVLQRTHLVTGDDAHYVAIVQELESLGARVLPVFAGGLDFSKPIEAYFYEPITKMQLIDAVVSLTGFALVGGPARQDHPKAIEALKRLNRPYMVALPLVFQTTEEWLDSDLGLHPIQVALQIAIPELDGAIEPIILSGKDGATGRAIALQDRVEIVAQRALKWANLRRKPKLDKKVAITVFSFPPDKGNVGTAAYLDVFGSIFEVLQGLRNNGYDVQDIPETPQELLEQVIHDAQAQYNSPELNIAYKMSVPEYEALTPYSQRLEENWGPPPGNLNSDGQNLLIYGKQFGNVFIGVQPTFGYEGDPMRLLFSRSASPHHGFAAYYTYLERIWGADAVLHFGTHGSLEFMPGKQMGMSGDCYPDQLIGSIPNLYYYAANNPSEATIAKRRSYAETISYLTPPAENAGLYKGLKELSELIASYQTLKDTGRGVSIVNSIMDKCRIVNLDKDIELPETDSKDMSSEERDNIVGSVYRRLMEIESRLLPCGLHVIGKPPSAEEAIATLVNIASLDRQEEEIQGLPGIIARSLGRTIEDIYRNNDAGILADVQLLQDITLATRAAVTALVQEQIDAEGRVIAVSKLNFFNMGRKEPWVESLHQSGYTKVDTSALKPLFEYLEFCLKQVCADNELGGLLQGLAGEYILPGPGGDPIRNPDVLPTGKNIHALDPQSIPTSAAVQSAKIVVDRLLERNRSENEGNWPETIACVLWGTDNIKTYGESLAQIMWMIGVRPVPDALGRVNKLELIPLSELGRPRIDVVINCSGVFRDLFINQMNLLDQGVKMAAEADEPLEMNFVRKHALKQAEDMGINLRQAATRVFSNASGSYSSNINLAVENSTWDSEAELQEMYLKRKSFSFNSDNPGVMDESREIFETTLKTADATFQNLDSSEISLTDVSHYFDSDPTKLVASLRADGKKPASYIADTTTANAQVRSLSETVRLDARTKLLNPKWYEGMLSHGYEGVRELSKRLVNTTGWSATAGAVDNWVYEDTNETFIKDEEMQKRLMNLNPHSFRKIVSTLLEMNGRGYWETSEENLDRLRELYQEVENRIEGIE
>NZ_CP011456.1|WP_053541120.1|5678067_5678643_-|Uma2-family-endonuclease
MNALTVSLKSVIDMTDDQFFQLCQNNRELRFERNANGELIIMSPAGGETGNRNGRLNQQLFNWTDADGTGIAFDSSTGFKLPNGADRSPDASWIKLERWDALSDEEKQKFPPICPDFVIELLSPSDSLKTTQEKMKEYIDNGVRLGILINRKSRQVEIYRPGKEVEVLDSPATVSGEDVLKGFVLNLAMIW
>NZ_CP011456.1|WP_053541119.1|5676760_5677936_-|DNA-cytosine-methyltransferase
MIDGKAISISLFTGAFGLDLGMEQAGFHTVSVVEKDRDATKTIALNRPFLQESAIPREIQNVSSQELLEEGGIVLNLGRALQPGEVDLVTGGPPCQPFSTAGKRGSVMDPRGSLFMDFVRIVKEVQPRFFLMENVKGLLSAPLRHRPINQRGKDYPPLEVDEIAGAALKVVLSEMKEIGYNIVYNLLEAADYGVPQNRARVVFIGSRDGEAATFPIPKYCKDGKILPKWRTLEDAITDLVDTEQEFMAYPESRLKYLRLLEAGQNWKHLPEELKQEAMGGAYNSGGGKVGFYRRLSWDKPSPTITTSPHQKATDMCHPVELRSLTVRESARIQTFPDDWIFYGSISSKYKQIGNAVPVLLAKELGSYLLNLIQGKKAKGKEISEQLSLFSL
>NZ_CP011456.1|WP_053541118.1|5675949_5676747_+|hypothetical-protein
MSTELTAETLIPLSVQERKALILHHASLIDVTHIADEDLHIAYKYGKIISSIAPAYFQYQIAQDKQNGSVLELDRQSQLISSKTEKFADDFIEWLKLDFEKKNSIIEDHPNPSNLFELCGAKLLVTSNSVTRSLSTTMGSLWEKISNISPYIINPEFEFGIKITGIDILLFSEETVKFAQLKTLKGTLTGSQVPRAKKELSIHENSLFIAAFDLGKWTFSNRSNIPRIAGKPFWNMICMDYDLVENHIRDMLQKIDQAFAELATK
>NZ_CP011456.1|WP_053541117.1|5675204_5675453_-|type-II-toxin-antitoxin-system-HicA-family-toxin
MSQQDKLSAKILSGASDTNISFEQLCQLLIRLGFDERIRGSHHIFTKEGVEEILNLQPKQGKAKAYQVKQVREMLLKYQLGG
>NZ_CP011456.1|WP_053541116.1|5674990_5675203_-|type-II-toxin-antitoxin-system-HicB-family-antitoxin
MTLRYEINLYWSEQDQAFIAEVPDLPGCAADGETYQEALQNIEIIMQEWIETAQELGRKIPEPTQRLMSA
>NZ_CP011456.1|WP_053541115.1|5674241_5674463_+|hypothetical-protein
MSNYQELLQQAKNLTPEEQLKLVENLSILIRQQLKMTSKPKRSILELRGLGKEIWGNIDAQEYINQERDSWNG
>NZ_CP011456.1|WP_053541114.1|5673761_5674040_-|Killer-protein
MIQTFKSKALQNLFRENFNKGVPANLEKKIRIRLEVIDSALMVDDIKLPGYDLHELKGDRKGTWSIKVSGNWRITFKFEDGDAYDVNLEDYH
>NZ_CP011456.1|WP_053541113.1|5673371_5673683_-|HigA-family-addiction-module-antidote-protein
MNNLQDITQDRLVRPIHPGEIIADILDDLDINPSNFAEILGVSNQTIQEIINGEKSITVDIAIRLGKALGNGHRLWLNLQQKVDVWDALQSHKEEYEQVMTLV
>NZ_CP011456.1|WP_081424332.1|5684545_5684971_-|PIN-domain-containing-protein
MDMERTPAVADTGFVVALLNRLDTMHNSVTPVYTQQKQILLPQTVLAEVAYLVGRNAGSATLVAFLKGLSASRFILVALTDQDLVRVAEILDEYADSRIDFVDASVMAIAERFDIKRILTLDQRDFRLFRPQHCDCFEILP
>NZ_CP011456.1|WP_027402764.1|5684943_5685219_-|hypothetical-protein
MKSTFNWNPEQTLLEKLINLASNRGQSPESIISEAVRSYLEIQSLETVNDAVSDPLIGLFAATPDLAINSEDILQNEVTEKSGWTWKEPQQ
>NZ_CP011456.1|WP_039199934.1|5685565_5685760_+|type-II-toxin-antitoxin-system-VapB-family-antitoxin
MTTSLNINEALLNEALALDNQVNIDSLVETALREYIQRRKRLKVLDLFGTIEYDESYNYKQQRH
>NZ_CP011456.1|WP_053541123.1|5685762_5686173_+|PIN-domain-containing-protein
MSIIVDTSVWSLALRRKTPPDFSPAVTILQNLITDDQVALLGAIRQEILSGIRNFEQFTRLRDYLRAFPDLELMPEDYELAAEFFNTCRSKGIQGSNTDFLICAVAHRRSYSILYTDNDFQNFLVHIPIILLPVEG
>NZ_CP011456.1|WP_053541124.1|5686543_5686840_+|hypothetical-protein
MQEQLTDYQQELTERISHVVDKLFRGSSFYMVKLDQYEMTATLIELFSRFSPEEMRAIKEHDLTRRIGKILTLEAVAGTLNDLTPEEIAIFDAAVARK
>NZ_CP011456.1|WP_053541125.1|5686844_5687243_+|type-II-toxin-antitoxin-system-VapC-family-toxin
MNFLLDSNIVSYALKKNTTINNKLRELSFLGSEIFISCITYYEIKRGLISLNATKQLVDFHGFCNDYPVLLLDDLEIIEKSCEIHAKLKSKGTPIQDADILIAATAIVRDLILVSNDSDLLRIEGLKLENWL
>NZ_CP011456.1|WP_053541126.1|5688432_5688681_-|hypothetical-protein
MSQAIDKPIIQENTLLEKFRNLTIEQQQTILDFVEFMHSKKPKSQDNQEVSAYDLAKEWAGSVESGIGDLSTNKRYLQGFGK
>NZ_CP011456.1|WP_053541127.1|5688974_5689193_+|hypothetical-protein
MQNLITDDQVALLGAIQSMGGVFAAIGTPAVSPKPRGKSPGWPTGRIRLRRIRYPTVKNTTPRPKKEQPKSA
>NZ_CP011456.1|WP_053541128.1|5690174_5690717_+|hypothetical-protein
MTTNSIFRLSPIIRITLLTLYIALTVPLPILAKVTSASVPPSLLIVGIIAGFVILYAVLSERVITDEEKIQVTYPVWIPRFFLPGWSLLWSDVKDLKPRTTGQGGLVYYFISHDGKGYLLPMRIAGLSQLLKIVQEKTNINTHDVNPFSQPWMYIILFGCTLLLLLVDIWTITNSVTGLP
>NZ_CP011456.1|WP_053541129.1|5690962_5691526_-|hypothetical-protein
MKKLNWRNYIIATLTTIVSNPILYVAAQEIPKGQCITNNFGQQLCGYNCVQNQFGQMKCADWPGGVCTVNNFGQITCGPPAPHHWNLRYTSPSQTANPPDIKWRIVRHNMSLQECQQRAYQSLETANFINLKTGVNSNSGYMIQGDINNNRAKISCLNDIVLIIVAGDEPKTLKRLHDSIYQNMGFR

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Crispr_ID: NZ_CP011456_48

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011456_48

5686173-5686440

Orphan

Consensus_repeat	Method
GNGCGATAGCGAAGCGCTNC	CRT

5 spacers

The CRISPR arrays of NZ_CP011456_48

>merge|NZ_CP011456|48|5686173-5686440|CRT
GCGCGATAGCGAAGCGCTGCTCCAAGCAGTTCGCCTAAAATTGGGGTGGTTGTGTGCGATAGCGAAGCGCTCCGTAGGAATCGCTGTTTGGGGATGTTGGGAGTGCGATAGCGAAGCACTCCGTAGGAATCGTTTAAAATTAGGGTTGTGAGCGATAGCGAAGCGCTCCCTAGGAATCGCTGTTTTGGGATGTTGGAGTGCGATAGCGAAGCGCTGCTGCAAGCAGTTCGTTTAAAATTAGGGGTTGTGTGCGATAGCGAAGCGCTCC

>NZ_CP011456|48|7|5686173-5686440|CRT
GCGCGATAGCGAAGCGCTGC	TCCAAGCAGTTCGCCTAAAATTGGGGTGGTTGT
GTGCGATAGCGAAGCGCTCC	GTAGGAATCGCTGTTTGGGGATGTTGGGA
GTGCGATAGCGAAGCACTCC	GTAGGAATCGTTTAAAATTAGGGTTGT
GAGCGATAGCGAAGCGCTCC	CTAGGAATCGCTGTTTTGGGATGTTGGA
GTGCGATAGCGAAGCGCTGC	TGCAAGCAGTTCGTTTAAAATTAGGGGTTGT
GTGCGATAGCGAAGCGCTCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011456.1\|WP_053541118.1\|5675949_5676747_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053541126.1\|5688432_5688681_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053541133.1\|5693401_5694319_-\|NAD(+)-kinase	unknown	unknown	gnl\|CDD\|179456
NZ_CP011456.1\|WP_053541119.1\|5676760_5677936_-\|DNA-cytosine-methyltransferase	unknown	unknown	gnl\|CDD\|223348
NZ_CP011456.1\|WP_053541117.1\|5675204_5675453_-\|type-II-toxin-antitoxin-system-HicA-family-toxin	unknown	unknown	gnl\|CDD\|377942
NZ_CP011456.1\|WP_053541121.1\|5678803_5682790_-\|magnesium-chelatase-subunit-H	unknown	unknown	gnl\|CDD\|237117
NZ_CP011456.1\|WP_053541125.1\|5686844_5687243_+\|type-II-toxin-antitoxin-system-VapC-family-toxin	unknown	unknown	gnl\|CDD\|350311
NZ_CP011456.1\|WP_053541128.1\|5690174_5690717_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053541124.1\|5686543_5686840_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274401
NZ_CP011456.1\|WP_053541129.1\|5690962_5691526_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053541130.1\|5691601_5691925_-\|XRE-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|372700
NZ_CP011456.1\|WP_053541132.1\|5692481_5693123_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|367642
NZ_CP011456.1\|WP_039199934.1\|5685565_5685760_+\|type-II-toxin-antitoxin-system-VapB-family-antitoxin	unknown	unknown	gnl\|CDD\|378324
NZ_CP011456.1\|WP_053541127.1\|5688974_5689193_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_081424332.1\|5684545_5684971_-\|PIN-domain-containing-protein	unknown	unknown	gnl\|CDD\|350263
NZ_CP011456.1\|WP_053541131.1\|5691929_5692307_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227024
NZ_CP011456.1\|WP_053541122.1\|5683292_5683907_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053541120.1\|5678067_5678643_-\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|368559
NZ_CP011456.1\|WP_027402764.1\|5684943_5685219_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011456.1\|WP_053541116.1\|5674990_5675203_-\|type-II-toxin-antitoxin-system-HicB-family-antitoxin	unknown	unknown	gnl\|CDD\|224514

Protein	Function_ID	Function_description	E-value
NZ_CP011456.1\|WP_053541119.1\|5676760_5677936_-\|DNA-cytosine-methyltransferase	gnl\|CDD\|223348	COG0270, Dcm, Site-specific DNA methylase [DNA replication, recombination, and repair].	8.00848e-91
NZ_CP011456.1\|WP_053541120.1\|5678067_5678643_-\|Uma2-family-endonuclease	gnl\|CDD\|368559	pfam05685, Uma2, Putative restriction endonuclease. This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. A small number of member proteins also contain pfam02861 domains that are involved in protein interactions. Solutions of several structures for members of this family show that it is likely to be acting as an endonuclease.	1.75796e-53
NZ_CP011456.1\|WP_053541133.1\|5693401_5694319_-\|NAD(+)-kinase	gnl\|CDD\|179456	PRK02649, ppnK, NAD(+) kinase.	0
NZ_CP011456.1\|WP_053541125.1\|5686844_5687243_+\|type-II-toxin-antitoxin-system-VapC-family-toxin	gnl\|CDD\|350311	cd18744, PIN_VapC4-5_FitB-like, uncharacterized subgroup of the PIN_VapC4-5_FitB-like subfamily of the PIN domain superfamily. The PIN_VapC4-5_FitB-like subfamily includes the Virulence associated protein C (VapC)-like PIN (PilT N terminus) domain of Mycobacterium tuberculosis VapC4 and VapC5 ribonuclease toxins of the VapBC toxin/antitoxin (TA) system, and Neisseria gonorrhoeae FitB toxin of the FitAB TA system. This subfamily belongs to the VapC-like family of the PIN domain nuclease superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	1.33487e-52
NZ_CP011456.1\|WP_053541124.1\|5686543_5686840_+\|hypothetical-protein	gnl\|CDD\|274401	TIGR03031, cas_csx12, CRISPR system subtype II-B RNA-guided endonuclease Cas9/Csx12. Members of this family of CRISPR-associated (cas) protein are found, so far, in CRISPR/cas loci in Wolinella succinogenes DSM 1740, Legionella pneumophila str. Paris, and Francisella tularensis, where the last probably is an example of a degenerate CRISPR locus, having neither repeats nor a functional Cas1. The characteristic repeat length is 37 base pairs and period is about 72. One region of this large protein shows sequence similarity to pfam01844, HNH endonuclease.	0.00737599
NZ_CP011456.1\|WP_053541130.1\|5691601_5691925_-\|XRE-family-transcriptional-regulator	gnl\|CDD\|372700	pfam13744, HTH_37, Helix-turn-helix domain. Members of this family contains a DNA-binding helix-turn-helix domain.	4.86998e-28
NZ_CP011456.1\|WP_053541132.1\|5692481_5693123_-\|hypothetical-protein	gnl\|CDD\|367642	pfam03762, VOMI, Vitelline membrane outer layer protein I (VOMI). VOMI binds tightly to ovomucin fibrils of the egg yolk membrane. The structure that consists of three beta-sheets forming Greek key motifs, which are related by an internal pseudo three-fold symmetry. Furthermore, the structure of VOMI has strong similarity to the structure of the delta-endotoxin, as well as a carbohydrate-binding site in the top region of the common fold.	7.97268e-57
NZ_CP011456.1\|WP_039199934.1\|5685565_5685760_+\|type-II-toxin-antitoxin-system-VapB-family-antitoxin	gnl\|CDD\|378324	pfam09957, VapB_antitoxin, Bacterial antitoxin of type II TA system, VapB. VapB is the antitoxin of a bacterial toxin-antitoxin gene pair. The cognate toxin is VapC, pfam05016. The family contains several related antitoxins from Cyanobacteria and Actinobacterial families. Antitoxins of this class carry an N-terminal ribbon-helix-helix domain, RHH, that is highly conserved across all type II bacterial antitoxins, which dimerizes with the RHH domain of a second VapB molecule. A hinge section follows the RHH, with an additional pair of flexible alpha helices at the C-terminus. This C-terminus is the Toxin-binding region of the dimer, and so is specific to the cognate toxin, whereas the RHH domain has the specific function of lying across the RNA-binding groove of the toxin dimer and inactivating the active-site - a more general function of all antitoxins.	6.14009e-05
NZ_CP011456.1\|WP_081424332.1\|5684545_5684971_-\|PIN-domain-containing-protein	gnl\|CDD\|350263	cd18696, PIN_MtVapC26-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC26 and related proteins. Mycobacterium tuberculosis VapC26 cleaves 23S rRNA in the Sarcin-Ricin Loop, it is inhibited by the cognate VapB26 antitoxin. This subfamily belongs to the VapC (virulence-associated protein C)-like nuclease family of the PIN domain-like superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include FitB toxin of the FitAB TA system, eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The PIN domain belongs to a large nuclease superfamily. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	2.6919e-14
NZ_CP011456.1\|WP_053541131.1\|5691929_5692307_-\|hypothetical-protein	gnl\|CDD\|227024	COG4679, COG4679, Phage-related protein [Function unknown].	5.39874e-29
NZ_CP011456.1\|WP_053541117.1\|5675204_5675453_-\|type-II-toxin-antitoxin-system-HicA-family-toxin	gnl\|CDD\|377942	pfam07927, HicA_toxin, HicA toxin of bacterial toxin-antitoxin,. HicA_toxin is a bacterial family of toxins that act as mRNA interferases. The antitoxin that neutralizes this is family HicB, pfam15919.	0.000289727
NZ_CP011456.1\|WP_053541121.1\|5678803_5682790_-\|magnesium-chelatase-subunit-H	gnl\|CDD\|237117	PRK12493, PRK12493, magnesium chelatase subunit H; Provisional.	0
NZ_CP011456.1\|WP_053541116.1\|5674990_5675203_-\|type-II-toxin-antitoxin-system-HicB-family-antitoxin	gnl\|CDD\|224514	COG1598, COG1598, Predicted nuclease of the RNAse H fold, HicB family [General function prediction only].	6.35284e-15

>NZ_CP011456.1|WP_039199934.1|5685565_5685760_+|type-II-toxin-antitoxin-system-VapB-family-antitoxin
MTTSLNINEALLNEALALDNQVNIDSLVETALREYIQRRKRLKVLDLFGTIEYDESYNYKQQRH
>NZ_CP011456.1|WP_027402764.1|5684943_5685219_-|hypothetical-protein
MKSTFNWNPEQTLLEKLINLASNRGQSPESIISEAVRSYLEIQSLETVNDAVSDPLIGLFAATPDLAINSEDILQNEVTEKSGWTWKEPQQ
>NZ_CP011456.1|WP_081424332.1|5684545_5684971_-|PIN-domain-containing-protein
MDMERTPAVADTGFVVALLNRLDTMHNSVTPVYTQQKQILLPQTVLAEVAYLVGRNAGSATLVAFLKGLSASRFILVALTDQDLVRVAEILDEYADSRIDFVDASVMAIAERFDIKRILTLDQRDFRLFRPQHCDCFEILP
>NZ_CP011456.1|WP_053541122.1|5683292_5683907_+|hypothetical-protein
MRTSGQIMLLEFLGDLLKIAFGADYYKLFTKRVNENDARNIFSVTDLAKKYPDFKDKVIEKAKSKIKKQSEGLDQKYEESITKKYMTFDQGLKLVKGLLDSVVSSGFGNTGITEKILSTFTSAVCTDGFLLFKEYHNSHKSQELYEIEESKDSDSFRLFYLHLDVEAEKIENFLYNESNTILKAEYKVIKFSNLQALLEWASDQ
>NZ_CP011456.1|WP_053541121.1|5678803_5682790_-|magnesium-chelatase-subunit-H
MFTQVKSTIRHIAPDDLRGRKLIKVVYVVLESQYQSALSQAVREINANHPSVAIEISGYLIEELRGTENYEELKRDIASANIFIASLIFIEDLAQKVVAAVEPHRDNLDVSVVFPSMPEVMRLNKMGSFSLAQLGQSKSVIANFMKKRKEKSGAGFQDGMLKLLRTLPQVLKFLPMEKAQDARNFMLSFQYWLGGSAENLENFLLMLADKYVLKGVEKESFAAAKYEAPVVYPDMGIWHPLAPTMFEDVREYLNWYSARKDISSNLKDPLAPCVGLVLQRTHLVTGDDAHYVAIVQELESLGARVLPVFAGGLDFSKPIEAYFYEPITKMQLIDAVVSLTGFALVGGPARQDHPKAIEALKRLNRPYMVALPLVFQTTEEWLDSDLGLHPIQVALQIAIPELDGAIEPIILSGKDGATGRAIALQDRVEIVAQRALKWANLRRKPKLDKKVAITVFSFPPDKGNVGTAAYLDVFGSIFEVLQGLRNNGYDVQDIPETPQELLEQVIHDAQAQYNSPELNIAYKMSVPEYEALTPYSQRLEENWGPPPGNLNSDGQNLLIYGKQFGNVFIGVQPTFGYEGDPMRLLFSRSASPHHGFAAYYTYLERIWGADAVLHFGTHGSLEFMPGKQMGMSGDCYPDQLIGSIPNLYYYAANNPSEATIAKRRSYAETISYLTPPAENAGLYKGLKELSELIASYQTLKDTGRGVSIVNSIMDKCRIVNLDKDIELPETDSKDMSSEERDNIVGSVYRRLMEIESRLLPCGLHVIGKPPSAEEAIATLVNIASLDRQEEEIQGLPGIIARSLGRTIEDIYRNNDAGILADVQLLQDITLATRAAVTALVQEQIDAEGRVIAVSKLNFFNMGRKEPWVESLHQSGYTKVDTSALKPLFEYLEFCLKQVCADNELGGLLQGLAGEYILPGPGGDPIRNPDVLPTGKNIHALDPQSIPTSAAVQSAKIVVDRLLERNRSENEGNWPETIACVLWGTDNIKTYGESLAQIMWMIGVRPVPDALGRVNKLELIPLSELGRPRIDVVINCSGVFRDLFINQMNLLDQGVKMAAEADEPLEMNFVRKHALKQAEDMGINLRQAATRVFSNASGSYSSNINLAVENSTWDSEAELQEMYLKRKSFSFNSDNPGVMDESREIFETTLKTADATFQNLDSSEISLTDVSHYFDSDPTKLVASLRADGKKPASYIADTTTANAQVRSLSETVRLDARTKLLNPKWYEGMLSHGYEGVRELSKRLVNTTGWSATAGAVDNWVYEDTNETFIKDEEMQKRLMNLNPHSFRKIVSTLLEMNGRGYWETSEENLDRLRELYQEVENRIEGIE
>NZ_CP011456.1|WP_053541120.1|5678067_5678643_-|Uma2-family-endonuclease
MNALTVSLKSVIDMTDDQFFQLCQNNRELRFERNANGELIIMSPAGGETGNRNGRLNQQLFNWTDADGTGIAFDSSTGFKLPNGADRSPDASWIKLERWDALSDEEKQKFPPICPDFVIELLSPSDSLKTTQEKMKEYIDNGVRLGILINRKSRQVEIYRPGKEVEVLDSPATVSGEDVLKGFVLNLAMIW
>NZ_CP011456.1|WP_053541119.1|5676760_5677936_-|DNA-cytosine-methyltransferase
MIDGKAISISLFTGAFGLDLGMEQAGFHTVSVVEKDRDATKTIALNRPFLQESAIPREIQNVSSQELLEEGGIVLNLGRALQPGEVDLVTGGPPCQPFSTAGKRGSVMDPRGSLFMDFVRIVKEVQPRFFLMENVKGLLSAPLRHRPINQRGKDYPPLEVDEIAGAALKVVLSEMKEIGYNIVYNLLEAADYGVPQNRARVVFIGSRDGEAATFPIPKYCKDGKILPKWRTLEDAITDLVDTEQEFMAYPESRLKYLRLLEAGQNWKHLPEELKQEAMGGAYNSGGGKVGFYRRLSWDKPSPTITTSPHQKATDMCHPVELRSLTVRESARIQTFPDDWIFYGSISSKYKQIGNAVPVLLAKELGSYLLNLIQGKKAKGKEISEQLSLFSL
>NZ_CP011456.1|WP_053541118.1|5675949_5676747_+|hypothetical-protein
MSTELTAETLIPLSVQERKALILHHASLIDVTHIADEDLHIAYKYGKIISSIAPAYFQYQIAQDKQNGSVLELDRQSQLISSKTEKFADDFIEWLKLDFEKKNSIIEDHPNPSNLFELCGAKLLVTSNSVTRSLSTTMGSLWEKISNISPYIINPEFEFGIKITGIDILLFSEETVKFAQLKTLKGTLTGSQVPRAKKELSIHENSLFIAAFDLGKWTFSNRSNIPRIAGKPFWNMICMDYDLVENHIRDMLQKIDQAFAELATK
>NZ_CP011456.1|WP_053541117.1|5675204_5675453_-|type-II-toxin-antitoxin-system-HicA-family-toxin
MSQQDKLSAKILSGASDTNISFEQLCQLLIRLGFDERIRGSHHIFTKEGVEEILNLQPKQGKAKAYQVKQVREMLLKYQLGG
>NZ_CP011456.1|WP_053541116.1|5674990_5675203_-|type-II-toxin-antitoxin-system-HicB-family-antitoxin
MTLRYEINLYWSEQDQAFIAEVPDLPGCAADGETYQEALQNIEIIMQEWIETAQELGRKIPEPTQRLMSA
>NZ_CP011456.1|WP_053541124.1|5686543_5686840_+|hypothetical-protein
MQEQLTDYQQELTERISHVVDKLFRGSSFYMVKLDQYEMTATLIELFSRFSPEEMRAIKEHDLTRRIGKILTLEAVAGTLNDLTPEEIAIFDAAVARK
>NZ_CP011456.1|WP_053541125.1|5686844_5687243_+|type-II-toxin-antitoxin-system-VapC-family-toxin
MNFLLDSNIVSYALKKNTTINNKLRELSFLGSEIFISCITYYEIKRGLISLNATKQLVDFHGFCNDYPVLLLDDLEIIEKSCEIHAKLKSKGTPIQDADILIAATAIVRDLILVSNDSDLLRIEGLKLENWL
>NZ_CP011456.1|WP_053541126.1|5688432_5688681_-|hypothetical-protein
MSQAIDKPIIQENTLLEKFRNLTIEQQQTILDFVEFMHSKKPKSQDNQEVSAYDLAKEWAGSVESGIGDLSTNKRYLQGFGK
>NZ_CP011456.1|WP_053541127.1|5688974_5689193_+|hypothetical-protein
MQNLITDDQVALLGAIQSMGGVFAAIGTPAVSPKPRGKSPGWPTGRIRLRRIRYPTVKNTTPRPKKEQPKSA
>NZ_CP011456.1|WP_053541128.1|5690174_5690717_+|hypothetical-protein
MTTNSIFRLSPIIRITLLTLYIALTVPLPILAKVTSASVPPSLLIVGIIAGFVILYAVLSERVITDEEKIQVTYPVWIPRFFLPGWSLLWSDVKDLKPRTTGQGGLVYYFISHDGKGYLLPMRIAGLSQLLKIVQEKTNINTHDVNPFSQPWMYIILFGCTLLLLLVDIWTITNSVTGLP
>NZ_CP011456.1|WP_053541129.1|5690962_5691526_-|hypothetical-protein
MKKLNWRNYIIATLTTIVSNPILYVAAQEIPKGQCITNNFGQQLCGYNCVQNQFGQMKCADWPGGVCTVNNFGQITCGPPAPHHWNLRYTSPSQTANPPDIKWRIVRHNMSLQECQQRAYQSLETANFINLKTGVNSNSGYMIQGDINNNRAKISCLNDIVLIIVAGDEPKTLKRLHDSIYQNMGFR
>NZ_CP011456.1|WP_053541130.1|5691601_5691925_-|XRE-family-transcriptional-regulator
MPEENQVEVSSGNVFADLGLSNPEERLLKAELVRKISEIITNLNLTQVQAAEILGIDQPKVSLLIRGRLSGFSTDRLMNYLNKLGSDVEITVKPKPENRKFAQIIVV
>NZ_CP011456.1|WP_053541131.1|5691929_5692307_-|hypothetical-protein
MNEKQEKPLRWIASALNDLKKFPEDVQDVMGYALDLAQHGQKHPNAKPLRGFSGAGVLEIVDDFDGDTYRAIYTVKFEGVIYLLHSFQKKSKHGIATPKQDIELVKKRLKIAQENYLQQTTEKME
>NZ_CP011456.1|WP_053541132.1|5692481_5693123_-|hypothetical-protein
MKKLLRLTICFGAVTLPHLFGLGLMNSSIVPVAFGQNSIRNDQVFTRKSGNGAPWGDWTRPVYCPPGSWAAGYTMRVEPERGEGDDTGLNAIALYCRDRNGRDVDRIMPDPGMWGNWLEDSNCSPGVFMTHFQLRVESNRGSEDDTAANSVAFTCGNRRQIESSGTTPWGNWGPWQGSYKRVAICGVQAKVESNRGESDDTALNDLEFMWCKI
>NZ_CP011456.1|WP_053541133.1|5693401_5694319_-|NAD(+)-kinase
MPKAGIIYNDVKPIASSVAIELKDKLTAAGWDVYITASIGGILGYSQPDSPVFHTPIEGLTPPGFDSDMKFTVVLGGDGTVLAASRLVAPSGIPMLTVNTGHMGFLTEIYLNQLPQALEQAMAGAYQVEDRAMLTVKVMRGDTVKWEALCLNEMVLHREPLTCMCHFEIAVGRHSPVDIAADGIIVSTPTGSTAYSLSAGGPVITPGVPVLQLVPICPHSLASRALVFPDSEPVNIYPVNIPRLVMVVDGNGGCYILPEDRVYLERSPYSARFIRLQSPEFFRVLREKLGWGLPHIAKPNSVELP

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Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP011456_3	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	NZ_CP011456.1	3265757-3265810	0	1.0
NZ_CP011456_3	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	NZ_CP011456.1	3783388-3783441	0	1.0
NZ_CP011456_3	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	NZ_CP011456.1	1306707-1306760	1	0.981
NZ_CP011456_3	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	NZ_CP011456.1	3461494-3461547	1	0.981
NZ_CP011456_3	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	NZ_CP011456.1	4115255-4115308	1	0.981
NZ_CP011456_3	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	NZ_CP011456.1	4432522-4432575	1	0.981
NZ_CP011456_3	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	NZ_CP011456.1	532117-532170	1	0.981
NZ_CP011456_3	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	NZ_CP011456.1	779788-779841	1	0.981
NZ_CP011456_3	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	NZ_CP011456.1	3199788-3199841	1	0.981
NZ_CP011456_3	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	NZ_CP011456.1	4456454-4456507	1	0.981
NZ_CP011456_3	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	NZ_CP011456.1	501745-501798	2	0.963
NZ_CP011456_3	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	NZ_CP011456.1	778672-778725	2	0.963
NZ_CP011456_3	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	NZ_CP011456.1	825566-825619	2	0.963
NZ_CP011456_3	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	NZ_CP011456.1	858055-858108	2	0.963
NZ_CP011456_3	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	NZ_CP011456.1	954271-954324	2	0.963
NZ_CP011456_3	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	NZ_CP011456.1	1097075-1097128	2	0.963
NZ_CP011456_3	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	NZ_CP011456.1	1964980-1965033	2	0.963
NZ_CP011456_3	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	NZ_CP011456.1	1968000-1968053	2	0.963
NZ_CP011456_3	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	NZ_CP011456.1	2107127-2107180	2	0.963
NZ_CP011456_3	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	NZ_CP011456.1	2425941-2425994	2	0.963
NZ_CP011456_3	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	NZ_CP011456.1	2566253-2566306	2	0.963
NZ_CP011456_3	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	NZ_CP011456.1	2738907-2738960	2	0.963
NZ_CP011456_3	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	NZ_CP011456.1	2750888-2750941	2	0.963
NZ_CP011456_3	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	NZ_CP011456.1	2890140-2890193	2	0.963
NZ_CP011456_3	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	NZ_CP011456.1	2901287-2901340	2	0.963
NZ_CP011456_3	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	NZ_CP011456.1	3134019-3134072	2	0.963
NZ_CP011456_3	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	NZ_CP011456.1	3186514-3186567	2	0.963
NZ_CP011456_3	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	NZ_CP011456.1	3282387-3282440	2	0.963
NZ_CP011456_3	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	NZ_CP011456.1	3297519-3297572	2	0.963
NZ_CP011456_3	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	NZ_CP011456.1	3411361-3411414	2	0.963
NZ_CP011456_3	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	NZ_CP011456.1	3446995-3447048	2	0.963
NZ_CP011456_3	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	NZ_CP011456.1	3478662-3478715	2	0.963
NZ_CP011456_3	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	NZ_CP011456.1	3487271-3487324	2	0.963
NZ_CP011456_3	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	NZ_CP011456.1	3509417-3509470	2	0.963
NZ_CP011456_3	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	NZ_CP011456.1	3512751-3512804	2	0.963
NZ_CP011456_3	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	NZ_CP011456.1	3533336-3533389	2	0.963
NZ_CP011456_3	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	NZ_CP011456.1	3627309-3627362	2	0.963
NZ_CP011456_3	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	NZ_CP011456.1	3855234-3855287	2	0.963
NZ_CP011456_3	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	NZ_CP011456.1	4025428-4025481	2	0.963
NZ_CP011456_3	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	NZ_CP011456.1	4027191-4027244	2	0.963
NZ_CP011456_3	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	NZ_CP011456.1	4105049-4105102	2	0.963
NZ_CP011456_3	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	NZ_CP011456.1	4116625-4116678	2	0.963
NZ_CP011456_3	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	NZ_CP011456.1	4545645-4545698	2	0.963
NZ_CP011456_3	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	NZ_CP011456.1	4665534-4665587	2	0.963
NZ_CP011456_3	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	NZ_CP011456.1	4740821-4740874	2	0.963
NZ_CP011456_3	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	NZ_CP011456.1	5087739-5087792	2	0.963
NZ_CP011456_3	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	NZ_CP011456.1	345345-345398	2	0.963
NZ_CP011456_3	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	NZ_CP011456.1	397494-397547	2	0.963
NZ_CP011456_3	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	NZ_CP011456.1	756915-756968	2	0.963
NZ_CP011456_3	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	NZ_CP011456.1	933823-933876	2	0.963
NZ_CP011456_3	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	NZ_CP011456.1	1204251-1204304	2	0.963
NZ_CP011456_3	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	NZ_CP011456.1	1223760-1223813	2	0.963
NZ_CP011456_3	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	NZ_CP011456.1	1264502-1264555	2	0.963
NZ_CP011456_3	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	NZ_CP011456.1	1861052-1861105	2	0.963
NZ_CP011456_3	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	NZ_CP011456.1	2640954-2641007	2	0.963
NZ_CP011456_3	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	NZ_CP011456.1	2833832-2833885	2	0.963
NZ_CP011456_3	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	NZ_CP011456.1	2855395-2855448	2	0.963
NZ_CP011456_3	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	NZ_CP011456.1	3101622-3101675	2	0.963
NZ_CP011456_3	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	NZ_CP011456.1	3101954-3102007	2	0.963
NZ_CP011456_3	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	NZ_CP011456.1	3173851-3173904	2	0.963
NZ_CP011456_3	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	NZ_CP011456.1	3209794-3209847	2	0.963
NZ_CP011456_3	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	NZ_CP011456.1	3349861-3349914	2	0.963
NZ_CP011456_3	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	NZ_CP011456.1	3367502-3367555	2	0.963
NZ_CP011456_3	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	NZ_CP011456.1	3423228-3423281	2	0.963
NZ_CP011456_3	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	NZ_CP011456.1	3436780-3436833	2	0.963
NZ_CP011456_3	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	NZ_CP011456.1	3629120-3629173	2	0.963
NZ_CP011456_3	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	NZ_CP011456.1	3793165-3793218	2	0.963
NZ_CP011456_3	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	NZ_CP011456.1	3860215-3860268	2	0.963
NZ_CP011456_3	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	NZ_CP011456.1	4116381-4116434	2	0.963
NZ_CP011456_3	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	NZ_CP011456.1	4891883-4891936	2	0.963
NZ_CP011456_3	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	NZ_CP011456.1	5248319-5248372	2	0.963
NZ_CP011456_3	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	NZ_CP011456.1	5645992-5646045	2	0.963
NZ_CP011456_4	4.2\|816198\|16\|NZ_CP011456\|CRISPRCasFinder	816198-816213	16	NZ_CP011456.1	239103-239118	0	1.0
NZ_CP011456_4	4.2\|816198\|16\|NZ_CP011456\|CRISPRCasFinder	816198-816213	16	NZ_CP011456.1	666052-666067	0	1.0
NZ_CP011456_4	4.2\|816198\|16\|NZ_CP011456\|CRISPRCasFinder	816198-816213	16	NZ_CP011456.1	816240-816255	0	1.0
NZ_CP011456_4	4.2\|816198\|16\|NZ_CP011456\|CRISPRCasFinder	816198-816213	16	NZ_CP011456.1	953296-953311	0	1.0
NZ_CP011456_4	4.2\|816198\|16\|NZ_CP011456\|CRISPRCasFinder	816198-816213	16	NZ_CP011456.1	967027-967042	0	1.0
NZ_CP011456_4	4.2\|816198\|16\|NZ_CP011456\|CRISPRCasFinder	816198-816213	16	NZ_CP011456.1	989604-989619	0	1.0
NZ_CP011456_4	4.2\|816198\|16\|NZ_CP011456\|CRISPRCasFinder	816198-816213	16	NZ_CP011456.1	989744-989759	0	1.0
NZ_CP011456_4	4.2\|816198\|16\|NZ_CP011456\|CRISPRCasFinder	816198-816213	16	NZ_CP011456.1	1021237-1021252	0	1.0
NZ_CP011456_4	4.2\|816198\|16\|NZ_CP011456\|CRISPRCasFinder	816198-816213	16	NZ_CP011456.1	1038566-1038581	0	1.0
NZ_CP011456_4	4.2\|816198\|16\|NZ_CP011456\|CRISPRCasFinder	816198-816213	16	NZ_CP011456.1	1144845-1144860	0	1.0
NZ_CP011456_4	4.2\|816198\|16\|NZ_CP011456\|CRISPRCasFinder	816198-816213	16	NZ_CP011456.1	1395371-1395386	0	1.0
NZ_CP011456_4	4.2\|816198\|16\|NZ_CP011456\|CRISPRCasFinder	816198-816213	16	NZ_CP011456.1	1767095-1767110	0	1.0
NZ_CP011456_4	4.2\|816198\|16\|NZ_CP011456\|CRISPRCasFinder	816198-816213	16	NZ_CP011456.1	2247287-2247302	0	1.0
NZ_CP011456_4	4.2\|816198\|16\|NZ_CP011456\|CRISPRCasFinder	816198-816213	16	NZ_CP011456.1	2347689-2347704	0	1.0
NZ_CP011456_4	4.2\|816198\|16\|NZ_CP011456\|CRISPRCasFinder	816198-816213	16	NZ_CP011456.1	2748876-2748891	0	1.0
NZ_CP011456_4	4.2\|816198\|16\|NZ_CP011456\|CRISPRCasFinder	816198-816213	16	NZ_CP011456.1	2899044-2899059	0	1.0
NZ_CP011456_4	4.2\|816198\|16\|NZ_CP011456\|CRISPRCasFinder	816198-816213	16	NZ_CP011456.1	3160091-3160106	0	1.0
NZ_CP011456_4	4.2\|816198\|16\|NZ_CP011456\|CRISPRCasFinder	816198-816213	16	NZ_CP011456.1	3179388-3179403	0	1.0
NZ_CP011456_4	4.2\|816198\|16\|NZ_CP011456\|CRISPRCasFinder	816198-816213	16	NZ_CP011456.1	3254750-3254765	0	1.0
NZ_CP011456_4	4.2\|816198\|16\|NZ_CP011456\|CRISPRCasFinder	816198-816213	16	NZ_CP011456.1	3409075-3409090	0	1.0
NZ_CP011456_4	4.2\|816198\|16\|NZ_CP011456\|CRISPRCasFinder	816198-816213	16	NZ_CP011456.1	3887303-3887318	0	1.0
NZ_CP011456_4	4.2\|816198\|16\|NZ_CP011456\|CRISPRCasFinder	816198-816213	16	NZ_CP011456.1	3940853-3940868	0	1.0
NZ_CP011456_4	4.2\|816198\|16\|NZ_CP011456\|CRISPRCasFinder	816198-816213	16	NZ_CP011456.1	4101754-4101769	0	1.0
NZ_CP011456_4	4.2\|816198\|16\|NZ_CP011456\|CRISPRCasFinder	816198-816213	16	NZ_CP011456.1	4439395-4439410	0	1.0
NZ_CP011456_4	4.2\|816198\|16\|NZ_CP011456\|CRISPRCasFinder	816198-816213	16	NZ_CP011456.1	5367537-5367552	0	1.0
NZ_CP011456_4	4.2\|816198\|16\|NZ_CP011456\|CRISPRCasFinder	816198-816213	16	NZ_CP011456.1	5413040-5413055	0	1.0
NZ_CP011456_4	4.2\|816198\|16\|NZ_CP011456\|CRISPRCasFinder	816198-816213	16	NZ_CP011456.1	5498224-5498239	0	1.0
NZ_CP011456_4	4.2\|816198\|16\|NZ_CP011456\|CRISPRCasFinder	816198-816213	16	NZ_CP011456.1	5513468-5513483	0	1.0
NZ_CP011456_4	4.2\|816198\|16\|NZ_CP011456\|CRISPRCasFinder	816198-816213	16	NZ_CP011456.1	5528380-5528395	0	1.0
NZ_CP011456_4	4.2\|816198\|16\|NZ_CP011456\|CRISPRCasFinder	816198-816213	16	NZ_CP011456.1	5604700-5604715	0	1.0
NZ_CP011456_15	15.1\|2575839\|37\|NZ_CP011456\|CRISPRCasFinder	2575839-2575875	37	NZ_CP011456.1	1849679-1849715	2	0.946
NZ_CP011456_17	17.1\|2608115\|35\|NZ_CP011456\|CRISPRCasFinder	2608115-2608149	35	NZ_CP011456.1	2610562-2610596	0	1.0
NZ_CP011456_17	17.1\|2608115\|35\|NZ_CP011456\|CRISPRCasFinder	2608115-2608149	35	NZ_CP011456.1	2610643-2610677	0	1.0
NZ_CP011456_17	17.1\|2608115\|35\|NZ_CP011456\|CRISPRCasFinder	2608115-2608149	35	NZ_CP011456.1	2610724-2610758	0	1.0
NZ_CP011456_17	17.1\|2608115\|35\|NZ_CP011456\|CRISPRCasFinder	2608115-2608149	35	NZ_CP011456.1	2610805-2610839	0	1.0
NZ_CP011456_17	17.1\|2608115\|35\|NZ_CP011456\|CRISPRCasFinder	2608115-2608149	35	NZ_CP011456.1	2610886-2610920	0	1.0
NZ_CP011456_17	17.1\|2608115\|35\|NZ_CP011456\|CRISPRCasFinder	2608115-2608149	35	NZ_CP011456.1	2614260-2614294	0	1.0
NZ_CP011456_17	17.1\|2608115\|35\|NZ_CP011456\|CRISPRCasFinder	2608115-2608149	35	NZ_CP011456.1	2955630-2955664	0	1.0
NZ_CP011456_17	17.1\|2608115\|35\|NZ_CP011456\|CRISPRCasFinder	2608115-2608149	35	NZ_CP011456.1	2958894-2958928	0	1.0
NZ_CP011456_17	17.1\|2608115\|35\|NZ_CP011456\|CRISPRCasFinder	2608115-2608149	35	NZ_CP011456.1	1097891-1097925	1	0.971
NZ_CP011456_17	17.1\|2608115\|35\|NZ_CP011456\|CRISPRCasFinder	2608115-2608149	35	NZ_CP011456.1	1098044-1098078	1	0.971
NZ_CP011456_17	17.1\|2608115\|35\|NZ_CP011456\|CRISPRCasFinder	2608115-2608149	35	NZ_CP011456.1	1098361-1098395	1	0.971
NZ_CP011456_17	17.1\|2608115\|35\|NZ_CP011456\|CRISPRCasFinder	2608115-2608149	35	NZ_CP011456.1	1098678-1098712	1	0.971
NZ_CP011456_17	17.1\|2608115\|35\|NZ_CP011456\|CRISPRCasFinder	2608115-2608149	35	NZ_CP011456.1	1098760-1098794	1	0.971
NZ_CP011456_17	17.1\|2608115\|35\|NZ_CP011456\|CRISPRCasFinder	2608115-2608149	35	NZ_CP011456.1	1098842-1098876	1	0.971
NZ_CP011456_17	17.1\|2608115\|35\|NZ_CP011456\|CRISPRCasFinder	2608115-2608149	35	NZ_CP011456.1	1099005-1099039	1	0.971
NZ_CP011456_17	17.1\|2608115\|35\|NZ_CP011456\|CRISPRCasFinder	2608115-2608149	35	NZ_CP011456.1	2959056-2959090	1	0.971
NZ_CP011456_17	17.1\|2608115\|35\|NZ_CP011456\|CRISPRCasFinder	2608115-2608149	35	NZ_CP011456.1	3401065-3401099	1	0.971
NZ_CP011456_21	21.1\|2784602\|37\|NZ_CP011456\|CRISPRCasFinder	2784602-2784638	37	NZ_CP011456.1	5298786-5298822	2	0.946
NZ_CP011456_22	22.1\|2961700\|33\|NZ_CP011456\|CRISPRCasFinder	2961700-2961732	33	NZ_CP011456.1	2955643-2955675	2	0.939
NZ_CP011456_22	22.1\|2961700\|33\|NZ_CP011456\|CRISPRCasFinder	2961700-2961732	33	NZ_CP011456.1	2955725-2955757	2	0.939
NZ_CP011456_24	24.1\|3000095\|37\|NZ_CP011456\|CRISPRCasFinder	3000095-3000131	37	NZ_CP011456.1	130855-130891	2	0.946
NZ_CP011456_24	24.1\|3000095\|37\|NZ_CP011456\|CRISPRCasFinder	3000095-3000131	37	NZ_CP011456.1	1122220-1122256	2	0.946
NZ_CP011456_24	24.1\|3000095\|37\|NZ_CP011456\|CRISPRCasFinder	3000095-3000131	37	NZ_CP011456.1	2411551-2411587	2	0.946
NZ_CP011456_24	24.1\|3000095\|37\|NZ_CP011456\|CRISPRCasFinder	3000095-3000131	37	NZ_CP011456.1	3212670-3212706	2	0.946
NZ_CP011456_24	24.1\|3000095\|37\|NZ_CP011456\|CRISPRCasFinder	3000095-3000131	37	NZ_CP011456.1	5046000-5046036	2	0.946
NZ_CP011456_24	24.1\|3000095\|37\|NZ_CP011456\|CRISPRCasFinder	3000095-3000131	37	NZ_CP011456.1	2291224-2291260	2	0.946
NZ_CP011456_24	24.1\|3000095\|37\|NZ_CP011456\|CRISPRCasFinder	3000095-3000131	37	NZ_CP011456.1	2344220-2344256	2	0.946
NZ_CP011456_26	26.1\|3030770\|30\|NZ_CP011456\|CRISPRCasFinder	3030770-3030799	30	NZ_CP011456.1	5498573-5498602	0	1.0
NZ_CP011456_26	26.1\|3030770\|30\|NZ_CP011456\|CRISPRCasFinder	3030770-3030799	30	NZ_CP011456.1	3633954-3633983	0	1.0
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	7815-7840	0	1.0
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	350696-350721	0	1.0
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	1395481-1395506	0	1.0
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	2139-2164	1	0.962
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	95924-95949	1	0.962
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	130869-130894	1	0.962
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	242572-242597	1	0.962
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	543268-543293	1	0.962
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	863218-863243	1	0.962
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	1122234-1122259	1	0.962
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	1308872-1308897	1	0.962
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	1779699-1779724	1	0.962
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	2411565-2411590	1	0.962
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	2544277-2544302	1	0.962
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	2559163-2559188	1	0.962
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	2598107-2598132	1	0.962
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	3513008-3513033	1	0.962
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	3887372-3887397	1	0.962
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	4018939-4018964	1	0.962
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	4127676-4127701	1	0.962
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	4398781-4398806	1	0.962
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	4928855-4928880	1	0.962
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	5173873-5173898	1	0.962
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	5176343-5176368	1	0.962
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	5619023-5619048	1	0.962
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	5699780-5699805	1	0.962
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	400213-400238	1	0.962
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	507648-507673	1	0.962
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	2291221-2291246	1	0.962
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	2344217-2344242	1	0.962
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	2477965-2477990	1	0.962
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	2562720-2562745	1	0.962
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	3207096-3207121	1	0.962
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	4764764-4764789	1	0.962
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	4768910-4768935	1	0.962
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	4915982-4916007	1	0.962
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	4932025-4932050	1	0.962
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	4939871-4939896	1	0.962
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	5585083-5585108	1	0.962
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	82481-82506	2	0.923
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	422582-422607	2	0.923
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	460358-460383	2	0.923
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	1159691-1159716	2	0.923
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	1233998-1234023	2	0.923
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	1288288-1288313	2	0.923
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	1305112-1305137	2	0.923
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	1328598-1328623	2	0.923
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	1418475-1418500	2	0.923
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	1466697-1466722	2	0.923
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	2398483-2398508	2	0.923
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	3212684-3212709	2	0.923
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	3230709-3230734	2	0.923
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	3462699-3462724	2	0.923
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	3613339-3613364	2	0.923
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	4011148-4011173	2	0.923
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	4494653-4494678	2	0.923
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	4682533-4682558	2	0.923
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	4750132-4750157	2	0.923
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	5046014-5046039	2	0.923
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	5587942-5587967	2	0.923
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	36692-36717	2	0.923
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	393654-393679	2	0.923
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	398644-398669	2	0.923
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	523562-523587	2	0.923
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	768248-768273	2	0.923
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	923975-924000	2	0.923
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	966622-966647	2	0.923
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	1116994-1117019	2	0.923
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	1117057-1117082	2	0.923
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	1465818-1465843	2	0.923
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	1835494-1835519	2	0.923
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	2253469-2253494	2	0.923
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	2756837-2756862	2	0.923
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	3176992-3177017	2	0.923
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	3179298-3179323	2	0.923
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	3332016-3332041	2	0.923
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	3614448-3614473	2	0.923
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	4093426-4093451	2	0.923
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	4109946-4109971	2	0.923
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	4716938-4716963	2	0.923
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	5224238-5224263	2	0.923
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	5370266-5370291	2	0.923
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP011456.1	5511501-5511526	2	0.923
NZ_CP011456_44	44.1\|5383345\|56\|NZ_CP011456\|CRISPRCasFinder	5383345-5383400	56	NZ_CP011456.1	2333385-2333440	1	0.982
NZ_CP011456_44	44.1\|5383345\|56\|NZ_CP011456\|CRISPRCasFinder	5383345-5383400	56	NZ_CP011456.1	2671900-2671955	2	0.964
NZ_CP011456_45	45.1\|5407068\|31\|NZ_CP011456\|CRISPRCasFinder	5407068-5407098	31	NZ_CP011456.1	2171-2201	0	1.0
NZ_CP011456_45	45.1\|5407068\|31\|NZ_CP011456\|CRISPRCasFinder	5407068-5407098	31	NZ_CP011456.1	932558-932588	0	1.0
NZ_CP011456_45	45.1\|5407068\|31\|NZ_CP011456\|CRISPRCasFinder	5407068-5407098	31	NZ_CP011456.1	1305183-1305213	0	1.0
NZ_CP011456_45	45.1\|5407068\|31\|NZ_CP011456\|CRISPRCasFinder	5407068-5407098	31	NZ_CP011456.1	1305214-1305244	0	1.0
NZ_CP011456_45	45.1\|5407068\|31\|NZ_CP011456\|CRISPRCasFinder	5407068-5407098	31	NZ_CP011456.1	2344180-2344210	0	1.0
NZ_CP011456_45	45.1\|5407068\|31\|NZ_CP011456\|CRISPRCasFinder	5407068-5407098	31	NZ_CP011456.1	2544356-2544386	0	1.0
NZ_CP011456_45	45.1\|5407068\|31\|NZ_CP011456\|CRISPRCasFinder	5407068-5407098	31	NZ_CP011456.1	3000141-3000171	0	1.0
NZ_CP011456_45	45.1\|5407068\|31\|NZ_CP011456\|CRISPRCasFinder	5407068-5407098	31	NZ_CP011456.1	4928895-4928925	0	1.0
NZ_CP011456_45	45.1\|5407068\|31\|NZ_CP011456\|CRISPRCasFinder	5407068-5407098	31	NZ_CP011456.1	4931949-4931979	0	1.0
NZ_CP011456_45	45.1\|5407068\|31\|NZ_CP011456\|CRISPRCasFinder	5407068-5407098	31	NZ_CP011456.1	4931988-4932018	0	1.0
NZ_CP011456_45	45.1\|5407068\|31\|NZ_CP011456\|CRISPRCasFinder	5407068-5407098	31	NZ_CP011456.1	5406999-5407029	0	1.0
NZ_CP011456_45	45.1\|5407068\|31\|NZ_CP011456\|CRISPRCasFinder	5407068-5407098	31	NZ_CP011456.1	5407121-5407151	0	1.0
NZ_CP011456_45	45.1\|5407068\|31\|NZ_CP011456\|CRISPRCasFinder	5407068-5407098	31	NZ_CP011456.1	5475882-5475912	0	1.0
NZ_CP011456_45	45.1\|5407068\|31\|NZ_CP011456\|CRISPRCasFinder	5407068-5407098	31	NZ_CP011456.1	5475913-5475943	0	1.0
NZ_CP011456_45	45.1\|5407068\|31\|NZ_CP011456\|CRISPRCasFinder	5407068-5407098	31	NZ_CP011456.1	5475944-5475974	0	1.0
NZ_CP011456_45	45.1\|5407068\|31\|NZ_CP011456\|CRISPRCasFinder	5407068-5407098	31	NZ_CP011456.1	5585015-5585045	0	1.0
NZ_CP011456_45	45.1\|5407068\|31\|NZ_CP011456\|CRISPRCasFinder	5407068-5407098	31	NZ_CP011456.1	5585843-5585873	0	1.0
NZ_CP011456_45	45.1\|5407068\|31\|NZ_CP011456\|CRISPRCasFinder	5407068-5407098	31	NZ_CP011456.1	5585910-5585940	0	1.0
NZ_CP011456_45	45.1\|5407068\|31\|NZ_CP011456\|CRISPRCasFinder	5407068-5407098	31	NZ_CP011456.1	5699812-5699842	0	1.0
NZ_CP011456_45	45.1\|5407068\|31\|NZ_CP011456\|CRISPRCasFinder	5407068-5407098	31	NZ_CP011456.1	1122266-1122296	1	0.968
NZ_CP011456_45	45.1\|5407068\|31\|NZ_CP011456\|CRISPRCasFinder	5407068-5407098	31	NZ_CP011456.1	1395513-1395543	1	0.968
NZ_CP011456_45	45.1\|5407068\|31\|NZ_CP011456\|CRISPRCasFinder	5407068-5407098	31	NZ_CP011456.1	2544309-2544339	1	0.968
NZ_CP011456_45	45.1\|5407068\|31\|NZ_CP011456\|CRISPRCasFinder	5407068-5407098	31	NZ_CP011456.1	2833716-2833746	1	0.968
NZ_CP011456_45	45.1\|5407068\|31\|NZ_CP011456\|CRISPRCasFinder	5407068-5407098	31	NZ_CP011456.1	4375142-4375172	1	0.968
NZ_CP011456_45	45.1\|5407068\|31\|NZ_CP011456\|CRISPRCasFinder	5407068-5407098	31	NZ_CP011456.1	4939826-4939856	1	0.968
NZ_CP011456_45	45.1\|5407068\|31\|NZ_CP011456\|CRISPRCasFinder	5407068-5407098	31	NZ_CP011456.1	5366712-5366742	1	0.968
NZ_CP011456_45	45.1\|5407068\|31\|NZ_CP011456\|CRISPRCasFinder	5407068-5407098	31	NZ_CP011456.1	242604-242634	2	0.935
NZ_CP011456_45	45.1\|5407068\|31\|NZ_CP011456\|CRISPRCasFinder	5407068-5407098	31	NZ_CP011456.1	1736782-1736812	2	0.935
NZ_CP011456_45	45.1\|5407068\|31\|NZ_CP011456\|CRISPRCasFinder	5407068-5407098	31	NZ_CP011456.1	2478022-2478052	2	0.935
NZ_CP011456_45	45.1\|5407068\|31\|NZ_CP011456\|CRISPRCasFinder	5407068-5407098	31	NZ_CP011456.1	3513040-3513070	2	0.935
NZ_CP011456_45	45.1\|5407068\|31\|NZ_CP011456\|CRISPRCasFinder	5407068-5407098	31	NZ_CP011456.1	4375095-4375125	2	0.935
NZ_CP011456_45	45.1\|5407068\|31\|NZ_CP011456\|CRISPRCasFinder	5407068-5407098	31	NZ_CP011456.1	5585046-5585076	2	0.935

1. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to position: 3265757-3265810, mismatch: 0, identity: 1.0

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	Protospacer
******************************************************

2. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to position: 3783388-3783441, mismatch: 0, identity: 1.0

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	Protospacer
******************************************************

3. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to position: 1306707-1306760, mismatch: 1, identity: 0.981

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgcctcttgccttttgccttgccataacgacaattttcaacaccaacctact	Protospacer
*******.**********************************************

4. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to position: 3461494-3461547, mismatch: 1, identity: 0.981

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgcctcttgccttttgccttgccataacgacaattttcaacaccaacctact	Protospacer
*******.**********************************************

5. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to position: 4115255-4115308, mismatch: 1, identity: 0.981

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgccttttgccttttgccttgccataacgacaattttcaacgccaacctact	Protospacer
*******************************************.**********

6. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to position: 4432522-4432575, mismatch: 1, identity: 0.981

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgcctcttgccttttgccttgccataacgacaattttcaacaccaacctact	Protospacer
*******.**********************************************

7. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to position: 532117-532170, mismatch: 1, identity: 0.981

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgcctcttgccttttgccttgccataacgacaattttcaacaccaacctact	Protospacer
*******.**********************************************

8. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to position: 779788-779841, mismatch: 1, identity: 0.981

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgcctcttgccttttgccttgccataacgacaattttcaacaccaacctact	Protospacer
*******.**********************************************

9. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to position: 3199788-3199841, mismatch: 1, identity: 0.981

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgccttttgccttttgccttgccataacgacaattttcaacgccaacctact	Protospacer
*******************************************.**********

10. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to position: 4456454-4456507, mismatch: 1, identity: 0.981

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgcctcttgccttttgccttgccataacgacaattttcaacaccaacctact	Protospacer
*******.**********************************************

11. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to position: 501745-501798, mismatch: 2, identity: 0.963

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgcctcttgccttttgccttgccataacgacaattttcaacgccaacctact	Protospacer
*******.***********************************.**********

12. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to position: 778672-778725, mismatch: 2, identity: 0.963

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgcctcttgccttttgccttgccataacgacaattttcaacacccacctact	Protospacer
*******.************************************** *******

13. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to position: 825566-825619, mismatch: 2, identity: 0.963

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgcctcttgccttttgccttgccataacgacaattttcaacgccaacctact	Protospacer
*******.***********************************.**********

14. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to position: 858055-858108, mismatch: 2, identity: 0.963

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgcctcttgccttttgccttgccataacgacaattttcaacacccacctact	Protospacer
*******.************************************** *******

15. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to position: 954271-954324, mismatch: 2, identity: 0.963

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgcctcttgccttttgccttgccataacgacaattttcaacgccaacctact	Protospacer
*******.***********************************.**********

16. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to position: 1097075-1097128, mismatch: 2, identity: 0.963

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgcctcttgccttttgccttgccataacgacaattttcaacgccaacctact	Protospacer
*******.***********************************.**********

17. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to position: 1964980-1965033, mismatch: 2, identity: 0.963

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgccttttgcctcttgccttgccataacgacaattttcaacgccaacctact	Protospacer
**************.****************************.**********

18. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to position: 1968000-1968053, mismatch: 2, identity: 0.963

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgcctcttgccttttgccttgccataacgacaattttcaacgccaacctact	Protospacer
*******.***********************************.**********

19. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to position: 2107127-2107180, mismatch: 2, identity: 0.963

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgcctcttgccttttgccttgccataacgacaattttcaacgccaacctact	Protospacer
*******.***********************************.**********

20. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to position: 2425941-2425994, mismatch: 2, identity: 0.963

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgcctcttgccttttgccttgccataacgacaattttcaacgccaacctact	Protospacer
*******.***********************************.**********

21. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to position: 2566253-2566306, mismatch: 2, identity: 0.963

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgcctcttgccttttgccttgccataacgacaattttcaacgccaacctact	Protospacer
*******.***********************************.**********

22. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to position: 2738907-2738960, mismatch: 2, identity: 0.963

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgcctcttgccttttgccttgccataacgacaattttcaacgccaacctact	Protospacer
*******.***********************************.**********

23. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to position: 2750888-2750941, mismatch: 2, identity: 0.963

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgcctcttgccttttgccttgccataacgacaattttcaacgccaacctact	Protospacer
*******.***********************************.**********

24. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to position: 2890140-2890193, mismatch: 2, identity: 0.963

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgcctcttgccttttgccttgccataacgacaattttcaacgccaacctact	Protospacer
*******.***********************************.**********

25. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to position: 2901287-2901340, mismatch: 2, identity: 0.963

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgcctcttgccttttgccttgccataacgacaattttcaacgccaacctact	Protospacer
*******.***********************************.**********

26. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to position: 3134019-3134072, mismatch: 2, identity: 0.963

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgcctcttgccttttgccttgccataacgacaattttcaacgccaacctact	Protospacer
*******.***********************************.**********

27. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to position: 3186514-3186567, mismatch: 2, identity: 0.963

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgcctcttgccttttgccttgccataacgacaattttcaacgccaacctact	Protospacer
*******.***********************************.**********

28. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to position: 3282387-3282440, mismatch: 2, identity: 0.963

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgcctcttgccttttgccttgccataacgacaattttcaacgccaacctact	Protospacer
*******.***********************************.**********

29. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to position: 3297519-3297572, mismatch: 2, identity: 0.963

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgcctcttgccttttgccttgccataacgacaattttcaacgccaacctact	Protospacer
*******.***********************************.**********

30. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to position: 3411361-3411414, mismatch: 2, identity: 0.963

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgcctcttgccttttgccttgccataacgacaattttcaacgccaacctact	Protospacer
*******.***********************************.**********

31. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to position: 3446995-3447048, mismatch: 2, identity: 0.963

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgcctcttgccttttgccttgccataacgacaattttcaacgccaacctact	Protospacer
*******.***********************************.**********

32. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to position: 3478662-3478715, mismatch: 2, identity: 0.963

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgcctcttgccttttgccttgccataacgacaattttcaacgccaacctact	Protospacer
*******.***********************************.**********

33. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to position: 3487271-3487324, mismatch: 2, identity: 0.963

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgcctcttgccttttgccttgccataacgacaattttcaacgccaacctact	Protospacer
*******.***********************************.**********

34. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to position: 3509417-3509470, mismatch: 2, identity: 0.963

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgcctcttgccttttgccttgccataacgacaattttcaacgccaacctact	Protospacer
*******.***********************************.**********

35. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to position: 3512751-3512804, mismatch: 2, identity: 0.963

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgcctcttgccttttgccttgccataacgacaattttcaacgccaacctact	Protospacer
*******.***********************************.**********

36. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to position: 3533336-3533389, mismatch: 2, identity: 0.963

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgcctcttgccttttgccttgccataacgacaattttcaacgccaacctact	Protospacer
*******.***********************************.**********

37. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to position: 3627309-3627362, mismatch: 2, identity: 0.963

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgcctcttgccttttgccttgccataacgacaattttcaacgccaacctact	Protospacer
*******.***********************************.**********

38. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to position: 3855234-3855287, mismatch: 2, identity: 0.963

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgcctcttgccttttgccttgccataacgacaattttcaacgccaacctact	Protospacer
*******.***********************************.**********

39. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to position: 4025428-4025481, mismatch: 2, identity: 0.963

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgcctcttgccttttgccttgccataacgacaattttcaacgccaacctact	Protospacer
*******.***********************************.**********

40. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to position: 4027191-4027244, mismatch: 2, identity: 0.963

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgcctcttgccttttgccttgccataacgacaattttcaacgccaacctact	Protospacer
*******.***********************************.**********

41. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to position: 4105049-4105102, mismatch: 2, identity: 0.963

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgcctcttgccttttgccttgccataacgacaattttcaacgccaacctact	Protospacer
*******.***********************************.**********

42. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to position: 4116625-4116678, mismatch: 2, identity: 0.963

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgcctcttgccttttgccttgccataacgacaattttcaacgccaacctact	Protospacer
*******.***********************************.**********

43. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to position: 4545645-4545698, mismatch: 2, identity: 0.963

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgcctcttgccttttgccttgccataacgacaattttcaacgccaacctact	Protospacer
*******.***********************************.**********

44. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to position: 4665534-4665587, mismatch: 2, identity: 0.963

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgcctcttgccttttgccttgccataacgacaattttcaacgccaacctact	Protospacer
*******.***********************************.**********

45. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to position: 4740821-4740874, mismatch: 2, identity: 0.963

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgcctcttgccttttgccttgccataacgacaattttcaacgccaacctact	Protospacer
*******.***********************************.**********

46. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to position: 5087739-5087792, mismatch: 2, identity: 0.963

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgccttttgcctcttgccttgccataacgacaattttcaacgccaacctact	Protospacer
**************.****************************.**********

47. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to position: 345345-345398, mismatch: 2, identity: 0.963

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgcctcttgccttttgccttgccataacgacaattttcaacgccaacctact	Protospacer
*******.***********************************.**********

48. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to position: 397494-397547, mismatch: 2, identity: 0.963

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgcctcttgccttttgccttgccataacgacaattttcaacgccaacctact	Protospacer
*******.***********************************.**********

49. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to position: 756915-756968, mismatch: 2, identity: 0.963

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgcctcttgccttttgccttgccataacgacaattttcaacgccaacctact	Protospacer
*******.***********************************.**********

50. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to position: 933823-933876, mismatch: 2, identity: 0.963

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgcctcttgccttttgccttgccataacgacaattttcaacgccaacctact	Protospacer
*******.***********************************.**********

51. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to position: 1204251-1204304, mismatch: 2, identity: 0.963

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgcctcttgccttttgccttgccataacgacaattttcaacgccaacctact	Protospacer
*******.***********************************.**********

52. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to position: 1223760-1223813, mismatch: 2, identity: 0.963

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgcctcttgccttttgccttgccataacgacaattttcaacgccaacctact	Protospacer
*******.***********************************.**********

53. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to position: 1264502-1264555, mismatch: 2, identity: 0.963

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgcctcttgccttttgccttgccataacgacaattttcaacgccaacctact	Protospacer
*******.***********************************.**********

54. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to position: 1861052-1861105, mismatch: 2, identity: 0.963

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgcctcttgccttttgccttgccataacgacaattttcaacgccaacctact	Protospacer
*******.***********************************.**********

55. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to position: 2640954-2641007, mismatch: 2, identity: 0.963

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgcctcttgccttttgccttgccataacgacaattttcaacgccaacctact	Protospacer
*******.***********************************.**********

56. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to position: 2833832-2833885, mismatch: 2, identity: 0.963

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgcctcttgccttttgccttgccataacgacaattttcaacgccaacctact	Protospacer
*******.***********************************.**********

57. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to position: 2855395-2855448, mismatch: 2, identity: 0.963

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgcctcttgccttttgccttgccataacgacaattttcaacgccaacctact	Protospacer
*******.***********************************.**********

58. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to position: 3101622-3101675, mismatch: 2, identity: 0.963

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgcctcttgccttttgccttgccataacgacaattttcaacgccaacctact	Protospacer
*******.***********************************.**********

59. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to position: 3101954-3102007, mismatch: 2, identity: 0.963

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgcctcttgccttttgccttgccataacgacaattttcaacgccaacctact	Protospacer
*******.***********************************.**********

60. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to position: 3173851-3173904, mismatch: 2, identity: 0.963

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgcctcttgccttttgccttgccataacgacaattttcaacgccaacctact	Protospacer
*******.***********************************.**********

61. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to position: 3209794-3209847, mismatch: 2, identity: 0.963

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgcctcttgccttttgccttgccataacgacaattttcaacgccaacctact	Protospacer
*******.***********************************.**********

62. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to position: 3349861-3349914, mismatch: 2, identity: 0.963

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgcctcttgccttttgccttgccataacgacaattttcaacgccaacctact	Protospacer
*******.***********************************.**********

63. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to position: 3367502-3367555, mismatch: 2, identity: 0.963

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgcctcttgccttttgccttgccataacgacaattttcaacgccaacctact	Protospacer
*******.***********************************.**********

64. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to position: 3423228-3423281, mismatch: 2, identity: 0.963

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgcctcttgccttttgccttgccataacgacaattttcaacgccaacctact	Protospacer
*******.***********************************.**********

65. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to position: 3436780-3436833, mismatch: 2, identity: 0.963

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgcctcttgccttttgccttgccataacgacaattttcaacgccaacctact	Protospacer
*******.***********************************.**********

66. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to position: 3629120-3629173, mismatch: 2, identity: 0.963

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgcctcttgccttttgccttgccataacgacaattttcaacgccaacctact	Protospacer
*******.***********************************.**********

67. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to position: 3793165-3793218, mismatch: 2, identity: 0.963

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgcctcttgccttttgccttgccataacgacaattttcaacgccaacctact	Protospacer
*******.***********************************.**********

68. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to position: 3860215-3860268, mismatch: 2, identity: 0.963

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgcctcttgccttttgccttgccataacgacaattttcaacgccaacctact	Protospacer
*******.***********************************.**********

69. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to position: 4116381-4116434, mismatch: 2, identity: 0.963

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgcctcttgccttttgccttgccataacgacaattttcaacgccaacctact	Protospacer
*******.***********************************.**********

70. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to position: 4891883-4891936, mismatch: 2, identity: 0.963

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgcctcttgccttttgccttgccataacgacaattttcaacgccaacctact	Protospacer
*******.***********************************.**********

71. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to position: 5248319-5248372, mismatch: 2, identity: 0.963

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgcctcttgccttttgccttgccataacgacaattttcaacgccaacctact	Protospacer
*******.***********************************.**********

72. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to position: 5645992-5646045, mismatch: 2, identity: 0.963

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgcctcttgccttttgccttgccataacgacaattttcaacgccaacctact	Protospacer
*******.***********************************.**********

73. spacer 4.2|816198|16|NZ_CP011456|CRISPRCasFinder matches to position: 239103-239118, mismatch: 0, identity: 1.0

agggggagaagagagg	CRISPR spacer
agggggagaagagagg	Protospacer
****************

74. spacer 4.2|816198|16|NZ_CP011456|CRISPRCasFinder matches to position: 666052-666067, mismatch: 0, identity: 1.0

agggggagaagagagg	CRISPR spacer
agggggagaagagagg	Protospacer
****************

75. spacer 4.2|816198|16|NZ_CP011456|CRISPRCasFinder matches to position: 816240-816255, mismatch: 0, identity: 1.0

agggggagaagagagg	CRISPR spacer
agggggagaagagagg	Protospacer
****************

76. spacer 4.2|816198|16|NZ_CP011456|CRISPRCasFinder matches to position: 953296-953311, mismatch: 0, identity: 1.0

agggggagaagagagg	CRISPR spacer
agggggagaagagagg	Protospacer
****************

77. spacer 4.2|816198|16|NZ_CP011456|CRISPRCasFinder matches to position: 967027-967042, mismatch: 0, identity: 1.0

agggggagaagagagg	CRISPR spacer
agggggagaagagagg	Protospacer
****************

78. spacer 4.2|816198|16|NZ_CP011456|CRISPRCasFinder matches to position: 989604-989619, mismatch: 0, identity: 1.0

agggggagaagagagg	CRISPR spacer
agggggagaagagagg	Protospacer
****************

79. spacer 4.2|816198|16|NZ_CP011456|CRISPRCasFinder matches to position: 989744-989759, mismatch: 0, identity: 1.0

agggggagaagagagg	CRISPR spacer
agggggagaagagagg	Protospacer
****************

80. spacer 4.2|816198|16|NZ_CP011456|CRISPRCasFinder matches to position: 1021237-1021252, mismatch: 0, identity: 1.0

agggggagaagagagg	CRISPR spacer
agggggagaagagagg	Protospacer
****************

81. spacer 4.2|816198|16|NZ_CP011456|CRISPRCasFinder matches to position: 1038566-1038581, mismatch: 0, identity: 1.0

agggggagaagagagg	CRISPR spacer
agggggagaagagagg	Protospacer
****************

82. spacer 4.2|816198|16|NZ_CP011456|CRISPRCasFinder matches to position: 1144845-1144860, mismatch: 0, identity: 1.0

agggggagaagagagg	CRISPR spacer
agggggagaagagagg	Protospacer
****************

83. spacer 4.2|816198|16|NZ_CP011456|CRISPRCasFinder matches to position: 1395371-1395386, mismatch: 0, identity: 1.0

agggggagaagagagg	CRISPR spacer
agggggagaagagagg	Protospacer
****************

84. spacer 4.2|816198|16|NZ_CP011456|CRISPRCasFinder matches to position: 1767095-1767110, mismatch: 0, identity: 1.0

agggggagaagagagg	CRISPR spacer
agggggagaagagagg	Protospacer
****************

85. spacer 4.2|816198|16|NZ_CP011456|CRISPRCasFinder matches to position: 2247287-2247302, mismatch: 0, identity: 1.0

agggggagaagagagg	CRISPR spacer
agggggagaagagagg	Protospacer
****************

86. spacer 4.2|816198|16|NZ_CP011456|CRISPRCasFinder matches to position: 2347689-2347704, mismatch: 0, identity: 1.0

agggggagaagagagg	CRISPR spacer
agggggagaagagagg	Protospacer
****************

87. spacer 4.2|816198|16|NZ_CP011456|CRISPRCasFinder matches to position: 2748876-2748891, mismatch: 0, identity: 1.0

agggggagaagagagg	CRISPR spacer
agggggagaagagagg	Protospacer
****************

88. spacer 4.2|816198|16|NZ_CP011456|CRISPRCasFinder matches to position: 2899044-2899059, mismatch: 0, identity: 1.0

agggggagaagagagg	CRISPR spacer
agggggagaagagagg	Protospacer
****************

89. spacer 4.2|816198|16|NZ_CP011456|CRISPRCasFinder matches to position: 3160091-3160106, mismatch: 0, identity: 1.0

agggggagaagagagg	CRISPR spacer
agggggagaagagagg	Protospacer
****************

90. spacer 4.2|816198|16|NZ_CP011456|CRISPRCasFinder matches to position: 3179388-3179403, mismatch: 0, identity: 1.0

agggggagaagagagg	CRISPR spacer
agggggagaagagagg	Protospacer
****************

91. spacer 4.2|816198|16|NZ_CP011456|CRISPRCasFinder matches to position: 3254750-3254765, mismatch: 0, identity: 1.0

agggggagaagagagg	CRISPR spacer
agggggagaagagagg	Protospacer
****************

92. spacer 4.2|816198|16|NZ_CP011456|CRISPRCasFinder matches to position: 3409075-3409090, mismatch: 0, identity: 1.0

agggggagaagagagg	CRISPR spacer
agggggagaagagagg	Protospacer
****************

93. spacer 4.2|816198|16|NZ_CP011456|CRISPRCasFinder matches to position: 3887303-3887318, mismatch: 0, identity: 1.0

agggggagaagagagg	CRISPR spacer
agggggagaagagagg	Protospacer
****************

94. spacer 4.2|816198|16|NZ_CP011456|CRISPRCasFinder matches to position: 3940853-3940868, mismatch: 0, identity: 1.0

agggggagaagagagg	CRISPR spacer
agggggagaagagagg	Protospacer
****************

95. spacer 4.2|816198|16|NZ_CP011456|CRISPRCasFinder matches to position: 4101754-4101769, mismatch: 0, identity: 1.0

agggggagaagagagg	CRISPR spacer
agggggagaagagagg	Protospacer
****************

96. spacer 4.2|816198|16|NZ_CP011456|CRISPRCasFinder matches to position: 4439395-4439410, mismatch: 0, identity: 1.0

agggggagaagagagg	CRISPR spacer
agggggagaagagagg	Protospacer
****************

97. spacer 4.2|816198|16|NZ_CP011456|CRISPRCasFinder matches to position: 5367537-5367552, mismatch: 0, identity: 1.0

agggggagaagagagg	CRISPR spacer
agggggagaagagagg	Protospacer
****************

98. spacer 4.2|816198|16|NZ_CP011456|CRISPRCasFinder matches to position: 5413040-5413055, mismatch: 0, identity: 1.0

agggggagaagagagg	CRISPR spacer
agggggagaagagagg	Protospacer
****************

99. spacer 4.2|816198|16|NZ_CP011456|CRISPRCasFinder matches to position: 5498224-5498239, mismatch: 0, identity: 1.0

agggggagaagagagg	CRISPR spacer
agggggagaagagagg	Protospacer
****************

100. spacer 4.2|816198|16|NZ_CP011456|CRISPRCasFinder matches to position: 5513468-5513483, mismatch: 0, identity: 1.0

agggggagaagagagg	CRISPR spacer
agggggagaagagagg	Protospacer
****************

101. spacer 4.2|816198|16|NZ_CP011456|CRISPRCasFinder matches to position: 5528380-5528395, mismatch: 0, identity: 1.0

agggggagaagagagg	CRISPR spacer
agggggagaagagagg	Protospacer
****************

102. spacer 4.2|816198|16|NZ_CP011456|CRISPRCasFinder matches to position: 5604700-5604715, mismatch: 0, identity: 1.0

agggggagaagagagg	CRISPR spacer
agggggagaagagagg	Protospacer
****************

103. spacer 15.1|2575839|37|NZ_CP011456|CRISPRCasFinder matches to position: 1849679-1849715, mismatch: 2, identity: 0.946

acatcctttaatcctgagcatcctgattctgacaaaa	CRISPR spacer
acatcctcaaatcctgagcatcctgattctgacaaaa	Protospacer
*******. ****************************

104. spacer 17.1|2608115|35|NZ_CP011456|CRISPRCasFinder matches to position: 2610562-2610596, mismatch: 0, identity: 1.0

gtgatgaaagttgtatttgtctgaatcaggataac	CRISPR spacer
gtgatgaaagttgtatttgtctgaatcaggataac	Protospacer
***********************************

105. spacer 17.1|2608115|35|NZ_CP011456|CRISPRCasFinder matches to position: 2610643-2610677, mismatch: 0, identity: 1.0

gtgatgaaagttgtatttgtctgaatcaggataac	CRISPR spacer
gtgatgaaagttgtatttgtctgaatcaggataac	Protospacer
***********************************

106. spacer 17.1|2608115|35|NZ_CP011456|CRISPRCasFinder matches to position: 2610724-2610758, mismatch: 0, identity: 1.0

gtgatgaaagttgtatttgtctgaatcaggataac	CRISPR spacer
gtgatgaaagttgtatttgtctgaatcaggataac	Protospacer
***********************************

107. spacer 17.1|2608115|35|NZ_CP011456|CRISPRCasFinder matches to position: 2610805-2610839, mismatch: 0, identity: 1.0

gtgatgaaagttgtatttgtctgaatcaggataac	CRISPR spacer
gtgatgaaagttgtatttgtctgaatcaggataac	Protospacer
***********************************

108. spacer 17.1|2608115|35|NZ_CP011456|CRISPRCasFinder matches to position: 2610886-2610920, mismatch: 0, identity: 1.0

gtgatgaaagttgtatttgtctgaatcaggataac	CRISPR spacer
gtgatgaaagttgtatttgtctgaatcaggataac	Protospacer
***********************************

109. spacer 17.1|2608115|35|NZ_CP011456|CRISPRCasFinder matches to position: 2614260-2614294, mismatch: 0, identity: 1.0

gtgatgaaagttgtatttgtctgaatcaggataac	CRISPR spacer
gtgatgaaagttgtatttgtctgaatcaggataac	Protospacer
***********************************

110. spacer 17.1|2608115|35|NZ_CP011456|CRISPRCasFinder matches to position: 2955630-2955664, mismatch: 0, identity: 1.0

gtgatgaaagttgtatttgtctgaatcaggataac	CRISPR spacer
gtgatgaaagttgtatttgtctgaatcaggataac	Protospacer
***********************************

111. spacer 17.1|2608115|35|NZ_CP011456|CRISPRCasFinder matches to position: 2958894-2958928, mismatch: 0, identity: 1.0

gtgatgaaagttgtatttgtctgaatcaggataac	CRISPR spacer
gtgatgaaagttgtatttgtctgaatcaggataac	Protospacer
***********************************

112. spacer 17.1|2608115|35|NZ_CP011456|CRISPRCasFinder matches to position: 1097891-1097925, mismatch: 1, identity: 0.971

gtgatgaaagttgtatttgtctgaatcaggataac	CRISPR spacer
gtgatgaaagttgtatttgtcagaatcaggataac	Protospacer
********************* *************

113. spacer 17.1|2608115|35|NZ_CP011456|CRISPRCasFinder matches to position: 1098044-1098078, mismatch: 1, identity: 0.971

gtgatgaaagttgtatttgtctgaatcaggataac	CRISPR spacer
gtgatgaaagttgtatttgtcagaatcaggataac	Protospacer
********************* *************

114. spacer 17.1|2608115|35|NZ_CP011456|CRISPRCasFinder matches to position: 1098361-1098395, mismatch: 1, identity: 0.971

gtgatgaaagttgtatttgtctgaatcaggataac	CRISPR spacer
gtgatgaaagttgtatttgtcagaatcaggataac	Protospacer
********************* *************

115. spacer 17.1|2608115|35|NZ_CP011456|CRISPRCasFinder matches to position: 1098678-1098712, mismatch: 1, identity: 0.971

gtgatgaaagttgtatttgtctgaatcaggataac	CRISPR spacer
gtgatgaaagttgtatttgtcagaatcaggataac	Protospacer
********************* *************

116. spacer 17.1|2608115|35|NZ_CP011456|CRISPRCasFinder matches to position: 1098760-1098794, mismatch: 1, identity: 0.971

gtgatgaaagttgtatttgtctgaatcaggataac	CRISPR spacer
gtgatgaaagttgtatttgtcagaatcaggataac	Protospacer
********************* *************

117. spacer 17.1|2608115|35|NZ_CP011456|CRISPRCasFinder matches to position: 1098842-1098876, mismatch: 1, identity: 0.971

gtgatgaaagttgtatttgtctgaatcaggataac	CRISPR spacer
gtgatgaaagttgtatttgtcagaatcaggataac	Protospacer
********************* *************

118. spacer 17.1|2608115|35|NZ_CP011456|CRISPRCasFinder matches to position: 1099005-1099039, mismatch: 1, identity: 0.971

gtgatgaaagttgtatttgtctgaatcaggataac	CRISPR spacer
gtgatgaaagttgtatttgtcagaatcaggataac	Protospacer
********************* *************

119. spacer 17.1|2608115|35|NZ_CP011456|CRISPRCasFinder matches to position: 2959056-2959090, mismatch: 1, identity: 0.971

gtgatgaaagttgtatttgtctgaatcaggataac	CRISPR spacer
gtgatgaaacttgtatttgtctgaatcaggataac	Protospacer
********* *************************

120. spacer 17.1|2608115|35|NZ_CP011456|CRISPRCasFinder matches to position: 3401065-3401099, mismatch: 1, identity: 0.971

gtgatgaaagttgtatttgtctgaatcaggataac	CRISPR spacer
gtgatgaaagttgtatttgtcagaatcaggataac	Protospacer
********************* *************

121. spacer 21.1|2784602|37|NZ_CP011456|CRISPRCasFinder matches to position: 5298786-5298822, mismatch: 2, identity: 0.946

ttgtcagaaatggctaacgccacgctacgcgaacagg	CRISPR spacer
ttgtcagaaatggctaacgccacgctacgctatcagg	Protospacer
****************************** * ****

122. spacer 22.1|2961700|33|NZ_CP011456|CRISPRCasFinder matches to position: 2955643-2955675, mismatch: 2, identity: 0.939

agacaaatgcaattttcatcaccaaacaaacca	CRISPR spacer
agacaaatacaactttcatcaccaaacaaacca	Protospacer
********.***.********************

123. spacer 22.1|2961700|33|NZ_CP011456|CRISPRCasFinder matches to position: 2955725-2955757, mismatch: 2, identity: 0.939

agacaaatgcaattttcatcaccaaacaaacca	CRISPR spacer
agacaaatacaactttcatcaccaaacaaacca	Protospacer
********.***.********************

124. spacer 24.1|3000095|37|NZ_CP011456|CRISPRCasFinder matches to position: 130855-130891, mismatch: 2, identity: 0.946

acgctaccatgaggtaggggcgcagggcctgcgccca	CRISPR spacer
acgctatcaggaggtaggggcgcagggcctgcgccca	Protospacer
******.** ***************************

125. spacer 24.1|3000095|37|NZ_CP011456|CRISPRCasFinder matches to position: 1122220-1122256, mismatch: 2, identity: 0.946

acgctaccatgaggtaggggcgcagggcctgcgccca	CRISPR spacer
acgctatcaggaggtaggggcgcagggcctgcgccca	Protospacer
******.** ***************************

126. spacer 24.1|3000095|37|NZ_CP011456|CRISPRCasFinder matches to position: 2411551-2411587, mismatch: 2, identity: 0.946

acgctaccatgaggtaggggcgcagggcctgcgccca	CRISPR spacer
acgctatcaggaggtaggggcgcagggcctgcgccca	Protospacer
******.** ***************************

127. spacer 24.1|3000095|37|NZ_CP011456|CRISPRCasFinder matches to position: 3212670-3212706, mismatch: 2, identity: 0.946

acgctaccatgaggtaggggcgcagggcctgcgccca	CRISPR spacer
acgctatcaggaggtaggggcgcagggcctgcgccca	Protospacer
******.** ***************************

128. spacer 24.1|3000095|37|NZ_CP011456|CRISPRCasFinder matches to position: 5046000-5046036, mismatch: 2, identity: 0.946

acgctaccatgaggtaggggcgcagggcctgcgccca	CRISPR spacer
acgctatcaggaggtaggggcgcagggcctgcgccca	Protospacer
******.** ***************************

129. spacer 24.1|3000095|37|NZ_CP011456|CRISPRCasFinder matches to position: 2291224-2291260, mismatch: 2, identity: 0.946

acgctaccatgaggtaggggcgcagggcctgcgccca	CRISPR spacer
acgctatcaggaggtaggggcgcagggcctgcgccca	Protospacer
******.** ***************************

130. spacer 24.1|3000095|37|NZ_CP011456|CRISPRCasFinder matches to position: 2344220-2344256, mismatch: 2, identity: 0.946

acgctaccatgaggtaggggcgcagggcctgcgccca	CRISPR spacer
acgctaccaaaaggtaggggcgcagggcctgcgccca	Protospacer
********* .**************************

131. spacer 26.1|3030770|30|NZ_CP011456|CRISPRCasFinder matches to position: 5498573-5498602, mismatch: 0, identity: 1.0

cgatgccctgagcctgtcgaagggtcgaag	CRISPR spacer
cgatgccctgagcctgtcgaagggtcgaag	Protospacer
******************************

132. spacer 26.1|3030770|30|NZ_CP011456|CRISPRCasFinder matches to position: 3633954-3633983, mismatch: 0, identity: 1.0

cgatgccctgagcctgtcgaagggtcgaag	CRISPR spacer
cgatgccctgagcctgtcgaagggtcgaag	Protospacer
******************************

133. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 7815-7840, mismatch: 0, identity: 1.0

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gaatgggcgcagtccctgcgccccta	Protospacer
**************************

134. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 350696-350721, mismatch: 0, identity: 1.0

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gaatgggcgcagtccctgcgccccta	Protospacer
**************************

135. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 1395481-1395506, mismatch: 0, identity: 1.0

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gaatgggcgcagtccctgcgccccta	Protospacer
**************************

136. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 2139-2164, mismatch: 1, identity: 0.962

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gaatgggcgcagaccctgcgccccta	Protospacer
************ *************

137. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 95924-95949, mismatch: 1, identity: 0.962

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gaatgggcgcaggccctgcgccccta	Protospacer
************ *************

138. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 130869-130894, mismatch: 1, identity: 0.962

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gaatgggcgcaggccctgcgccccta	Protospacer
************ *************

139. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 242572-242597, mismatch: 1, identity: 0.962

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gaatgggcgcaggccctgcgccccta	Protospacer
************ *************

140. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 543268-543293, mismatch: 1, identity: 0.962

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gagtgggcgcagtccctgcgccccta	Protospacer
**.***********************

141. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 863218-863243, mismatch: 1, identity: 0.962

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gaatgggcgcaggccctgcgccccta	Protospacer
************ *************

142. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 1122234-1122259, mismatch: 1, identity: 0.962

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gaatgggcgcaggccctgcgccccta	Protospacer
************ *************

143. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 1308872-1308897, mismatch: 1, identity: 0.962

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gaatgggcgcaggccctgcgccccta	Protospacer
************ *************

144. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 1779699-1779724, mismatch: 1, identity: 0.962

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gaatgggcgcaggccctgcgccccta	Protospacer
************ *************

145. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 2411565-2411590, mismatch: 1, identity: 0.962

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gaatgggcgcaggccctgcgccccta	Protospacer
************ *************

146. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 2544277-2544302, mismatch: 1, identity: 0.962

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gaatgggcgcaggccctgcgccccta	Protospacer
************ *************

147. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 2559163-2559188, mismatch: 1, identity: 0.962

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gaatgggcgcaggccctgcgccccta	Protospacer
************ *************

148. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 2598107-2598132, mismatch: 1, identity: 0.962

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gaatgggcgcaggccctgcgccccta	Protospacer
************ *************

149. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 3513008-3513033, mismatch: 1, identity: 0.962

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gaatgggcgcaggccctgcgccccta	Protospacer
************ *************

150. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 3887372-3887397, mismatch: 1, identity: 0.962

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gaatgggcgcaggccctgcgccccta	Protospacer
************ *************

151. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 4018939-4018964, mismatch: 1, identity: 0.962

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gaatgggcgcaggccctgcgccccta	Protospacer
************ *************

152. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 4127676-4127701, mismatch: 1, identity: 0.962

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gaatgggcgcagaccctgcgccccta	Protospacer
************ *************

153. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 4398781-4398806, mismatch: 1, identity: 0.962

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gaatgggcgcaggccctgcgccccta	Protospacer
************ *************

154. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 4928855-4928880, mismatch: 1, identity: 0.962

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gaatgggcgcaggccctgcgccccta	Protospacer
************ *************

155. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 5173873-5173898, mismatch: 1, identity: 0.962

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gaatgggcgcaggccctgcgccccta	Protospacer
************ *************

156. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 5176343-5176368, mismatch: 1, identity: 0.962

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gattgggcgcagtccctgcgccccta	Protospacer
** ***********************

157. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 5619023-5619048, mismatch: 1, identity: 0.962

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gactgggcgcagtccctgcgccccta	Protospacer
** ***********************

158. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 5699780-5699805, mismatch: 1, identity: 0.962

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gaatgggcgcaggccctgcgccccta	Protospacer
************ *************

159. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 400213-400238, mismatch: 1, identity: 0.962

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gactgggcgcagtccctgcgccccta	Protospacer
** ***********************

160. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 507648-507673, mismatch: 1, identity: 0.962

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gaatgggcgcaggccctgcgccccta	Protospacer
************ *************

161. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 2291221-2291246, mismatch: 1, identity: 0.962

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gaatgggcgcaggccctgcgccccta	Protospacer
************ *************

162. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 2344217-2344242, mismatch: 1, identity: 0.962

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gaatgggcgcaggccctgcgccccta	Protospacer
************ *************

163. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 2477965-2477990, mismatch: 1, identity: 0.962

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gaatgggcgcaggccctgcgccccta	Protospacer
************ *************

164. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 2562720-2562745, mismatch: 1, identity: 0.962

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gaatgggcgcaggccctgcgccccta	Protospacer
************ *************

165. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 3207096-3207121, mismatch: 1, identity: 0.962

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gaatgggcgcaggccctgcgccccta	Protospacer
************ *************

166. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 4764764-4764789, mismatch: 1, identity: 0.962

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gaatgggcgcaggccctgcgccccta	Protospacer
************ *************

167. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 4768910-4768935, mismatch: 1, identity: 0.962

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gaatgggcgcaggccctgcgccccta	Protospacer
************ *************

168. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 4915982-4916007, mismatch: 1, identity: 0.962

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gaatgggcgcaggccctgcgccccta	Protospacer
************ *************

169. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 4932025-4932050, mismatch: 1, identity: 0.962

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gaatgggcgcaggccctgcgccccta	Protospacer
************ *************

170. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 4939871-4939896, mismatch: 1, identity: 0.962

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gaatgggcgcaggccctgcgccccta	Protospacer
************ *************

171. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 5585083-5585108, mismatch: 1, identity: 0.962

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gaatgggcgcaggccctgcgccccta	Protospacer
************ *************

172. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 82481-82506, mismatch: 2, identity: 0.923

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gattgggcgcaggccctgcgccccta	Protospacer
** ********* *************

173. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 422582-422607, mismatch: 2, identity: 0.923

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gaatgggcgcaagccctgcgccccta	Protospacer
***********. *************

174. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 460358-460383, mismatch: 2, identity: 0.923

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gaaagggcgcaggccctgcgccccta	Protospacer
*** ******** *************

175. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 1159691-1159716, mismatch: 2, identity: 0.923

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gactgggcgcaggccctgcgccccta	Protospacer
** ********* *************

176. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 1233998-1234023, mismatch: 2, identity: 0.923

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gaaagggcgcaggccctgcgccccta	Protospacer
*** ******** *************

177. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 1288288-1288313, mismatch: 2, identity: 0.923

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gaaagggcgcaggccctgcgccccta	Protospacer
*** ******** *************

178. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 1305112-1305137, mismatch: 2, identity: 0.923

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gactgggcgcaggccctgcgccccta	Protospacer
** ********* *************

179. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 1328598-1328623, mismatch: 2, identity: 0.923

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gactgggcgcaggccctgcgccccta	Protospacer
** ********* *************

180. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 1418475-1418500, mismatch: 2, identity: 0.923

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gactgggcgcagaccctgcgccccta	Protospacer
** ********* *************

181. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 1466697-1466722, mismatch: 2, identity: 0.923

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gaatgggcgcaagccctgcgccccta	Protospacer
***********. *************

182. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 2398483-2398508, mismatch: 2, identity: 0.923

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gactgggcgcaggccctgcgccccta	Protospacer
** ********* *************

183. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 3212684-3212709, mismatch: 2, identity: 0.923

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gagtgggcgcaggccctgcgccccta	Protospacer
**.********* *************

184. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 3230709-3230734, mismatch: 2, identity: 0.923

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gactgggcgcaggccctgcgccccta	Protospacer
** ********* *************

185. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 3462699-3462724, mismatch: 2, identity: 0.923

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gattgggcgcaggccctgcgccccta	Protospacer
** ********* *************

186. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 3613339-3613364, mismatch: 2, identity: 0.923

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gactgggcgcaggccctgcgccccta	Protospacer
** ********* *************

187. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 4011148-4011173, mismatch: 2, identity: 0.923

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gactgggcgcaggccctgcgccccta	Protospacer
** ********* *************

188. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 4494653-4494678, mismatch: 2, identity: 0.923

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gactgggcgcaggccctgcgccccta	Protospacer
** ********* *************

189. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 4682533-4682558, mismatch: 2, identity: 0.923

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gactgggcgcaggccctgcgccccta	Protospacer
** ********* *************

190. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 4750132-4750157, mismatch: 2, identity: 0.923

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gattgggcgcaggccctgcgccccta	Protospacer
** ********* *************

191. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 5046014-5046039, mismatch: 2, identity: 0.923

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gactgggcgcaggccctgcgccccta	Protospacer
** ********* *************

192. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 5587942-5587967, mismatch: 2, identity: 0.923

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gactgggcgcaggccctgcgccccta	Protospacer
** ********* *************

193. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 36692-36717, mismatch: 2, identity: 0.923

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gactgggcgcaggccctgcgccccta	Protospacer
** ********* *************

194. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 393654-393679, mismatch: 2, identity: 0.923

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gactgggcgcaggccctgcgccccta	Protospacer
** ********* *************

195. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 398644-398669, mismatch: 2, identity: 0.923

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gactgggcgcaggccctgcgccccta	Protospacer
** ********* *************

196. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 523562-523587, mismatch: 2, identity: 0.923

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gactgggcgcagaccctgcgccccta	Protospacer
** ********* *************

197. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 768248-768273, mismatch: 2, identity: 0.923

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gactgggcgcagaccctgcgccccta	Protospacer
** ********* *************

198. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 923975-924000, mismatch: 2, identity: 0.923

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gactgggcgcaggccctgcgccccta	Protospacer
** ********* *************

199. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 966622-966647, mismatch: 2, identity: 0.923

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gactgggcgcaggccctgcgccccta	Protospacer
** ********* *************

200. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 1116994-1117019, mismatch: 2, identity: 0.923

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gaatgggcgcaggccatgcgccccta	Protospacer
************ ** **********

201. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 1117057-1117082, mismatch: 2, identity: 0.923

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gaatgggcgcagggcctgcgccccta	Protospacer
************  ************

202. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 1465818-1465843, mismatch: 2, identity: 0.923

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gactgggcgcaggccctgcgccccta	Protospacer
** ********* *************

203. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 1835494-1835519, mismatch: 2, identity: 0.923

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gactgggcgcaggccctgcgccccta	Protospacer
** ********* *************

204. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 2253469-2253494, mismatch: 2, identity: 0.923

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gattgggcgcaggccctgcgccccta	Protospacer
** ********* *************

205. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 2756837-2756862, mismatch: 2, identity: 0.923

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gactgggcgcaggccctgcgccccta	Protospacer
** ********* *************

206. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 3176992-3177017, mismatch: 2, identity: 0.923

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gactgggcgcagtccctgcaccccta	Protospacer
** ****************.******

207. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 3179298-3179323, mismatch: 2, identity: 0.923

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gattgggcgcaggccctgcgccccta	Protospacer
** ********* *************

208. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 3332016-3332041, mismatch: 2, identity: 0.923

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gactgggcgcagaccctgcgccccta	Protospacer
** ********* *************

209. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 3614448-3614473, mismatch: 2, identity: 0.923

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gactgggcgcaggccctgcgccccta	Protospacer
** ********* *************

210. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 4093426-4093451, mismatch: 2, identity: 0.923

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gactgggcgcaggccctgcgccccta	Protospacer
** ********* *************

211. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 4109946-4109971, mismatch: 2, identity: 0.923

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gactgggcgcaggccctgcgccccta	Protospacer
** ********* *************

212. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 4716938-4716963, mismatch: 2, identity: 0.923

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gactgggcgcattccctgcgccccta	Protospacer
** ******** **************

213. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 5224238-5224263, mismatch: 2, identity: 0.923

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gactgggcgcaggccctgcgccccta	Protospacer
** ********* *************

214. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 5370266-5370291, mismatch: 2, identity: 0.923

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gactgggcgcaggccctgcgccccta	Protospacer
** ********* *************

215. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to position: 5511501-5511526, mismatch: 2, identity: 0.923

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gattgggcgcaggccctgcgccccta	Protospacer
** ********* *************

216. spacer 44.1|5383345|56|NZ_CP011456|CRISPRCasFinder matches to position: 2333385-2333440, mismatch: 1, identity: 0.982

tctggaagtctttcattgccttcccatagcgtttcccacagaggaggaataacgaa	CRISPR spacer
tctagaagtctttcattgccttcccatagcgtttcccacagaggaggaataacgaa	Protospacer
***.****************************************************

217. spacer 44.1|5383345|56|NZ_CP011456|CRISPRCasFinder matches to position: 2671900-2671955, mismatch: 2, identity: 0.964

tctggaagtctttcattgccttcccatagcgtttcccacagaggaggaataacgaa	CRISPR spacer
tctggaagtctttcattgccttcccgtagcgtctcccacagaggaggaataacgaa	Protospacer
*************************.******.***********************

218. spacer 45.1|5407068|31|NZ_CP011456|CRISPRCasFinder matches to position: 2171-2201, mismatch: 0, identity: 1.0

actcctgatagcgcagcgtggcgttagccat	CRISPR spacer
actcctgatagcgcagcgtggcgttagccat	Protospacer
*******************************

219. spacer 45.1|5407068|31|NZ_CP011456|CRISPRCasFinder matches to position: 932558-932588, mismatch: 0, identity: 1.0

actcctgatagcgcagcgtggcgttagccat	CRISPR spacer
actcctgatagcgcagcgtggcgttagccat	Protospacer
*******************************

220. spacer 45.1|5407068|31|NZ_CP011456|CRISPRCasFinder matches to position: 1305183-1305213, mismatch: 0, identity: 1.0

actcctgatagcgcagcgtggcgttagccat	CRISPR spacer
actcctgatagcgcagcgtggcgttagccat	Protospacer
*******************************

221. spacer 45.1|5407068|31|NZ_CP011456|CRISPRCasFinder matches to position: 1305214-1305244, mismatch: 0, identity: 1.0

actcctgatagcgcagcgtggcgttagccat	CRISPR spacer
actcctgatagcgcagcgtggcgttagccat	Protospacer
*******************************

222. spacer 45.1|5407068|31|NZ_CP011456|CRISPRCasFinder matches to position: 2344180-2344210, mismatch: 0, identity: 1.0

actcctgatagcgcagcgtggcgttagccat	CRISPR spacer
actcctgatagcgcagcgtggcgttagccat	Protospacer
*******************************

223. spacer 45.1|5407068|31|NZ_CP011456|CRISPRCasFinder matches to position: 2544356-2544386, mismatch: 0, identity: 1.0

actcctgatagcgcagcgtggcgttagccat	CRISPR spacer
actcctgatagcgcagcgtggcgttagccat	Protospacer
*******************************

224. spacer 45.1|5407068|31|NZ_CP011456|CRISPRCasFinder matches to position: 3000141-3000171, mismatch: 0, identity: 1.0

actcctgatagcgcagcgtggcgttagccat	CRISPR spacer
actcctgatagcgcagcgtggcgttagccat	Protospacer
*******************************

225. spacer 45.1|5407068|31|NZ_CP011456|CRISPRCasFinder matches to position: 4928895-4928925, mismatch: 0, identity: 1.0

actcctgatagcgcagcgtggcgttagccat	CRISPR spacer
actcctgatagcgcagcgtggcgttagccat	Protospacer
*******************************

226. spacer 45.1|5407068|31|NZ_CP011456|CRISPRCasFinder matches to position: 4931949-4931979, mismatch: 0, identity: 1.0

actcctgatagcgcagcgtggcgttagccat	CRISPR spacer
actcctgatagcgcagcgtggcgttagccat	Protospacer
*******************************

227. spacer 45.1|5407068|31|NZ_CP011456|CRISPRCasFinder matches to position: 4931988-4932018, mismatch: 0, identity: 1.0

actcctgatagcgcagcgtggcgttagccat	CRISPR spacer
actcctgatagcgcagcgtggcgttagccat	Protospacer
*******************************

228. spacer 45.1|5407068|31|NZ_CP011456|CRISPRCasFinder matches to position: 5406999-5407029, mismatch: 0, identity: 1.0

actcctgatagcgcagcgtggcgttagccat	CRISPR spacer
actcctgatagcgcagcgtggcgttagccat	Protospacer
*******************************

229. spacer 45.1|5407068|31|NZ_CP011456|CRISPRCasFinder matches to position: 5407121-5407151, mismatch: 0, identity: 1.0

actcctgatagcgcagcgtggcgttagccat	CRISPR spacer
actcctgatagcgcagcgtggcgttagccat	Protospacer
*******************************

230. spacer 45.1|5407068|31|NZ_CP011456|CRISPRCasFinder matches to position: 5475882-5475912, mismatch: 0, identity: 1.0

actcctgatagcgcagcgtggcgttagccat	CRISPR spacer
actcctgatagcgcagcgtggcgttagccat	Protospacer
*******************************

231. spacer 45.1|5407068|31|NZ_CP011456|CRISPRCasFinder matches to position: 5475913-5475943, mismatch: 0, identity: 1.0

actcctgatagcgcagcgtggcgttagccat	CRISPR spacer
actcctgatagcgcagcgtggcgttagccat	Protospacer
*******************************

232. spacer 45.1|5407068|31|NZ_CP011456|CRISPRCasFinder matches to position: 5475944-5475974, mismatch: 0, identity: 1.0

actcctgatagcgcagcgtggcgttagccat	CRISPR spacer
actcctgatagcgcagcgtggcgttagccat	Protospacer
*******************************

233. spacer 45.1|5407068|31|NZ_CP011456|CRISPRCasFinder matches to position: 5585015-5585045, mismatch: 0, identity: 1.0

actcctgatagcgcagcgtggcgttagccat	CRISPR spacer
actcctgatagcgcagcgtggcgttagccat	Protospacer
*******************************

234. spacer 45.1|5407068|31|NZ_CP011456|CRISPRCasFinder matches to position: 5585843-5585873, mismatch: 0, identity: 1.0

actcctgatagcgcagcgtggcgttagccat	CRISPR spacer
actcctgatagcgcagcgtggcgttagccat	Protospacer
*******************************

235. spacer 45.1|5407068|31|NZ_CP011456|CRISPRCasFinder matches to position: 5585910-5585940, mismatch: 0, identity: 1.0

actcctgatagcgcagcgtggcgttagccat	CRISPR spacer
actcctgatagcgcagcgtggcgttagccat	Protospacer
*******************************

236. spacer 45.1|5407068|31|NZ_CP011456|CRISPRCasFinder matches to position: 5699812-5699842, mismatch: 0, identity: 1.0

actcctgatagcgcagcgtggcgttagccat	CRISPR spacer
actcctgatagcgcagcgtggcgttagccat	Protospacer
*******************************

237. spacer 45.1|5407068|31|NZ_CP011456|CRISPRCasFinder matches to position: 1122266-1122296, mismatch: 1, identity: 0.968

actcctgatagcgcagcgtggcgttagccat	CRISPR spacer
actcctgatagcgaagcgtggcgttagccat	Protospacer
************* *****************

238. spacer 45.1|5407068|31|NZ_CP011456|CRISPRCasFinder matches to position: 1395513-1395543, mismatch: 1, identity: 0.968

actcctgatagcgcagcgtggcgttagccat	CRISPR spacer
actcctgatagcgcagcgtggccttagccat	Protospacer
********************** ********

239. spacer 45.1|5407068|31|NZ_CP011456|CRISPRCasFinder matches to position: 2544309-2544339, mismatch: 1, identity: 0.968

actcctgatagcgcagcgtggcgttagccat	CRISPR spacer
actcctgatagcgcagcgtggggttagccat	Protospacer
********************* *********

240. spacer 45.1|5407068|31|NZ_CP011456|CRISPRCasFinder matches to position: 2833716-2833746, mismatch: 1, identity: 0.968

actcctgatagcgcagcgtggcgttagccat	CRISPR spacer
actcctgatagcgtagcgtggcgttagccat	Protospacer
*************.*****************

241. spacer 45.1|5407068|31|NZ_CP011456|CRISPRCasFinder matches to position: 4375142-4375172, mismatch: 1, identity: 0.968

actcctgatagcgcagcgtggcgttagccat	CRISPR spacer
actcctgatagcgaagcgtggcgttagccat	Protospacer
************* *****************

242. spacer 45.1|5407068|31|NZ_CP011456|CRISPRCasFinder matches to position: 4939826-4939856, mismatch: 1, identity: 0.968

actcctgatagcgcagcgtggcgttagccat	CRISPR spacer
actcctgacagcgcagcgtggcgttagccat	Protospacer
********.**********************

243. spacer 45.1|5407068|31|NZ_CP011456|CRISPRCasFinder matches to position: 5366712-5366742, mismatch: 1, identity: 0.968

actcctgatagcgcagcgtggcgttagccat	CRISPR spacer
actcctggtagcgcagcgtggcgttagccat	Protospacer
*******.***********************

244. spacer 45.1|5407068|31|NZ_CP011456|CRISPRCasFinder matches to position: 242604-242634, mismatch: 2, identity: 0.935

actcctgatagcgcagcgtggcgttagccat	CRISPR spacer
actcctgatagcgaagcgtggtgttagccat	Protospacer
************* *******.*********

245. spacer 45.1|5407068|31|NZ_CP011456|CRISPRCasFinder matches to position: 1736782-1736812, mismatch: 2, identity: 0.935

actcctgatagcgcagcgtggcgttagccat	CRISPR spacer
actcctgatagcgtggcgtggcgttagccat	Protospacer
*************..****************

246. spacer 45.1|5407068|31|NZ_CP011456|CRISPRCasFinder matches to position: 2478022-2478052, mismatch: 2, identity: 0.935

actcctgatagcgcagcgtggcgttagccat	CRISPR spacer
acttctgatagcgcagcgtggcgttagtcat	Protospacer
***.***********************.***

247. spacer 45.1|5407068|31|NZ_CP011456|CRISPRCasFinder matches to position: 3513040-3513070, mismatch: 2, identity: 0.935

actcctgatagcgcagcgtggcgttagccat	CRISPR spacer
acttctgatagcgaagcgtggcgttagccat	Protospacer
***.********* *****************

248. spacer 45.1|5407068|31|NZ_CP011456|CRISPRCasFinder matches to position: 4375095-4375125, mismatch: 2, identity: 0.935

actcctgatagcgcagcgtggcgttagccat	CRISPR spacer
actcctgatagcaaagcgtggcgttagccat	Protospacer
************. *****************

249. spacer 45.1|5407068|31|NZ_CP011456|CRISPRCasFinder matches to position: 5585046-5585076, mismatch: 2, identity: 0.935

actcctgatagcgcagcgtggcgttagccat	CRISPR spacer
actcctgatagcgaagcgtggtgttagccat	Protospacer
************* *******.*********

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP011456_38	38.1\|4547822\|41\|NZ_CP011456\|CRISPRCasFinder,CRT	4547822-4547862	41	MG209611	Aphanizomenon phage vB_AphaS-CL131, complete genome	75316-75356	0	1.0
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	KY555144	Caulobacter phage Ccr5, complete genome	187739-187764	3	0.885
NZ_CP011456_45	45.1\|5407068\|31\|NZ_CP011456\|CRISPRCasFinder	5407068-5407098	31	NC_020157	Anabaena cylindrica PCC 7122 plasmid pANACY.02, complete sequence	59372-59402	3	0.903
NZ_CP011456_37	37.1\|4446782\|25\|NZ_CP011456\|CRISPRCasFinder	4446782-4446806	25	NZ_CP040345	Bacillus albus strain DLOU-Yingkou plasmid unnamed1, complete sequence	251586-251610	4	0.84
NZ_CP011456_37	37.1\|4446782\|25\|NZ_CP011456\|CRISPRCasFinder	4446782-4446806	25	NZ_CP053657	Bacillus cereus strain CTMA_1571 plasmid p.1, complete sequence	175944-175968	4	0.84
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP020385	Rhodovulum sp. MB263 plasmid pRSMBA, complete sequence	23848-23873	4	0.846
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_CP053316	Bacillus circulans strain GN03 plasmid unnamed, complete sequence	73191-73220	5	0.833
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP050081	Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b5, complete sequence	749335-749360	5	0.808
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP053206	Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1D, complete sequence	784852-784877	5	0.808
NZ_CP011456_45	45.1\|5407068\|31\|NZ_CP011456\|CRISPRCasFinder	5407068-5407098	31	NC_003240	Nostoc sp. PCC 7120 = FACHB-418 plasmid pCC7120beta, complete sequence	126200-126230	5	0.839
NZ_CP011456_45	45.1\|5407068\|31\|NZ_CP011456\|CRISPRCasFinder	5407068-5407098	31	NZ_CP020115	Nodularia spumigena UHCC 0039 plasmid pUHCC0039a, complete sequence	16511-16541	5	0.839
NZ_CP011456_45	45.1\|5407068\|31\|NZ_CP011456\|CRISPRCasFinder	5407068-5407098	31	NZ_CP020115	Nodularia spumigena UHCC 0039 plasmid pUHCC0039a, complete sequence	66466-66496	5	0.839
NZ_CP011456_6	6.1\|957095\|33\|NZ_CP011456\|CRISPRCasFinder	957095-957127	33	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	2137496-2137528	6	0.818
NZ_CP011456_7	7.1\|968531\|27\|NZ_CP011456\|CRISPRCasFinder	968531-968557	27	NZ_CP031268	Staphylococcus warneri strain 16A plasmid unnamed2	3040-3066	6	0.778
NZ_CP011456_7	7.1\|968531\|27\|NZ_CP011456\|CRISPRCasFinder	968531-968557	27	MN693958	Marine virus AFVG_250M1164, complete genome	20973-20999	6	0.778
NZ_CP011456_7	7.1\|968531\|27\|NZ_CP011456\|CRISPRCasFinder	968531-968557	27	MN694724	Marine virus AFVG_250M441, complete genome	43071-43097	6	0.778
NZ_CP011456_26	26.1\|3030770\|30\|NZ_CP011456\|CRISPRCasFinder	3030770-3030799	30	NZ_CP017076	Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence	1116580-1116609	6	0.8
NZ_CP011456_26	26.1\|3030770\|30\|NZ_CP011456\|CRISPRCasFinder	3030770-3030799	30	NZ_AP018521	Sphingobium sp. YG1 plasmid pYGP2, complete sequence	52393-52422	6	0.8
NZ_CP011456_26	26.1\|3030770\|30\|NZ_CP011456\|CRISPRCasFinder	3030770-3030799	30	NZ_CP012699	Microbacterium sp. No. 7 plasmid B, complete sequence	31601-31630	6	0.8
NZ_CP011456_38	38.3\|4547970\|35\|NZ_CP011456\|CRISPRCasFinder,CRT	4547970-4548004	35	CP027117	Bacillus phage EZ-2018a, complete genome	12332-12366	6	0.829
NZ_CP011456_41	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	NZ_CP049731	Rhizobium leguminosarum strain A1 plasmid pRL12, complete sequence	784610-784635	6	0.769
NZ_CP011456_42	42.1\|4903318\|31\|NZ_CP011456\|CRISPRCasFinder	4903318-4903348	31	MN693090	Marine virus AFVG_25M23, complete genome	12529-12559	6	0.806
NZ_CP011456_45	45.1\|5407068\|31\|NZ_CP011456\|CRISPRCasFinder	5407068-5407098	31	NZ_CP011457	Anabaena sp. WA102 plasmid, complete sequence	64451-64481	6	0.806
NZ_CP011456_45	45.1\|5407068\|31\|NZ_CP011456\|CRISPRCasFinder	5407068-5407098	31	NZ_CP051207	Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence	40517-40547	6	0.806
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NC_019429	Anabaena sp. 90 plasmid pANA02, complete sequence	10954-10983	7	0.767
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	MN871441	UNVERIFIED: Aeromonas phage AsSzw2, complete genome	36205-36234	7	0.767
NZ_CP011456_26	26.1\|3030770\|30\|NZ_CP011456\|CRISPRCasFinder	3030770-3030799	30	NZ_CP017076	Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence	369272-369301	7	0.767
NZ_CP011456_26	26.1\|3030770\|30\|NZ_CP011456\|CRISPRCasFinder	3030770-3030799	30	NZ_CP024182	Moraxella osloensis strain KSH plasmid p2, complete sequence	8469-8498	7	0.767
NZ_CP011456_26	26.1\|3030770\|30\|NZ_CP011456\|CRISPRCasFinder	3030770-3030799	30	NZ_CP024187	Moraxella osloensis strain TT16 plasmid p2, complete sequence	8469-8498	7	0.767
NZ_CP011456_26	26.1\|3030770\|30\|NZ_CP011456\|CRISPRCasFinder	3030770-3030799	30	NZ_CP016453	Sphingobium sp. RAC03 plasmid pBSY17_1, complete sequence	400813-400842	7	0.767
NZ_CP011456_26	26.1\|3030770\|30\|NZ_CP011456\|CRISPRCasFinder	3030770-3030799	30	NZ_CP024178	Moraxella osloensis strain YHS plasmid pYHS2, complete sequence	8469-8498	7	0.767
NZ_CP011456_26	26.1\|3030770\|30\|NZ_CP011456\|CRISPRCasFinder	3030770-3030799	30	NZ_AP017382	Moraxella osloensis strain KMC41 plasmid pMOSL1, complete sequence	37928-37957	7	0.767
NZ_CP011456_26	26.1\|3030770\|30\|NZ_CP011456\|CRISPRCasFinder	3030770-3030799	30	NZ_CP054841	Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence	222733-222762	7	0.767
NZ_CP011456_26	26.1\|3030770\|30\|NZ_CP011456\|CRISPRCasFinder	3030770-3030799	30	NZ_CP024449	Moraxella osloensis strain NP7 plasmid pNP7-6, complete sequence	39280-39309	7	0.767
NZ_CP011456_30	30.1\|3467111\|34\|NZ_CP011456\|PILER-CR,CRISPRCasFinder	3467111-3467144	34	NZ_CP029455	Bacillus cereus strain FORC087 plasmid pFORC087.1, complete sequence	301740-301773	7	0.794
NZ_CP011456_30	30.1\|3467111\|34\|NZ_CP011456\|PILER-CR,CRISPRCasFinder	3467111-3467144	34	NZ_CP022346	Bacillus thuringiensis strain c25 plasmid unnamed1, complete sequence	101461-101494	7	0.794
NZ_CP011456_30	30.1\|3467111\|34\|NZ_CP011456\|PILER-CR,CRISPRCasFinder	3467111-3467144	34	NC_018689	Bacillus thuringiensis MC28 plasmid pMC429, complete sequence	13276-13309	7	0.794
NZ_CP011456_30	30.1\|3467111\|34\|NZ_CP011456\|PILER-CR,CRISPRCasFinder	3467111-3467144	34	NZ_CP040345	Bacillus albus strain DLOU-Yingkou plasmid unnamed1, complete sequence	137425-137458	7	0.794
NZ_CP011456_31	31.10\|3594923\|35\|NZ_CP011456\|PILER-CR,CRISPRCasFinder,CRT	3594923-3594957	35	NZ_CP045561	Acinetobacter nosocomialis strain AC1530 plasmid pAC1530, complete sequence	141303-141337	7	0.8
NZ_CP011456_31	31.10\|3594923\|35\|NZ_CP011456\|PILER-CR,CRISPRCasFinder,CRT	3594923-3594957	35	NZ_CP014478	Acinetobacter pittii strain AP_882 plasmid pNDM-AP_882, complete sequence	140359-140393	7	0.8
NZ_CP011456_38	38.14\|4547822\|52\|NZ_CP011456\|PILER-CR	4547822-4547873	52	MG209611	Aphanizomenon phage vB_AphaS-CL131, complete genome	75316-75367	7	0.865
NZ_CP011456_42	42.1\|4903318\|31\|NZ_CP011456\|CRISPRCasFinder	4903318-4903348	31	KX160217	Lactococcus phage 98203, complete genome	11951-11981	7	0.774
NZ_CP011456_45	45.1\|5407068\|31\|NZ_CP011456\|CRISPRCasFinder	5407068-5407098	31	NC_019428	Anabaena sp. 90 plasmid pANA01, complete sequence	40888-40918	7	0.774
NZ_CP011456_45	45.1\|5407068\|31\|NZ_CP011456\|CRISPRCasFinder	5407068-5407098	31	NZ_CP043059	Dolichospermum sp. UHCC 0315A plasmid pUHCC0315c, complete sequence	47582-47612	7	0.774
NZ_CP011456_45	45.1\|5407068\|31\|NZ_CP011456\|CRISPRCasFinder	5407068-5407098	31	NZ_CP017077	Novosphingobium resinovorum strain SA1 plasmid pSA2, complete sequence	209038-209068	7	0.774
NZ_CP011456_48	48.2\|5686246\|29\|NZ_CP011456\|CRT	5686246-5686274	29	NZ_LR536451	Methylocella tundrae isolate MTUNDRAET4 annotated genome plasmid 2	158862-158890	7	0.759
NZ_CP011456_2	2.1\|542882\|31\|NZ_CP011456\|CRISPRCasFinder	542882-542912	31	MH319750	Marine virus AG-345-F15 Ga0172271_12 genomic sequence	15456-15486	8	0.742
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_KX711706	Escherichia coli strain CSZ4 plasmid pCSZ4, complete sequence	19365-19394	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_KX711708	Escherichia coli strain pPY1 plasmid pPY1, complete sequence	21000-21029	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_KX772777	Escherichia coli strain E15004 plasmid pE15004, complete sequence	19365-19394	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_KX711707	Escherichia coli strain FS170G plasmid pFS170G, complete sequence	21053-21082	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_KY120363	Salmonella enterica subsp. enterica serovar Typhimurium strain C214 plasmid pC214, complete sequence	28997-29026	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_KY075655	Escherichia coli strain WH03 plasmid pWH03-3, complete sequence	19355-19384	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_KY075660	Escherichia coli strain GD65 plasmid pGD65-4, complete sequence	19363-19392	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_KY471146	Escherichia coli strain EC111 plasmid pEC111, complete sequence	33154-33183	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_KX032520	Escherichia coli strain Af48 isolate B plasmid pAF48, complete sequence	19170-19199	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_KY075652	Escherichia coli strain GD46 plasmid pGD46-3, complete sequence	19363-19392	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_KY075653	Escherichia coli strain Lishui12 plasmid pLishui12-2, complete sequence	19365-19394	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_KX236309	Klebsiella pneumoniae strain KP-6884 plasmid pMCR1.2-IT, complete sequence	19360-19389	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_KX129783	Escherichia coli strain OW3E1 plasmid pOW3E1, complete sequence	20696-20725	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_KX447768	Escherichia coli strain MCR1_NJ plasmid pMCR1-NJ-IncX4, complete sequence	19360-19389	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NC_022105	Escherichia coli strain ECSAM7 plasmid pSAM7, complete sequence	19121-19150	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_KM580533	Escherichia coli strain GXEC6 plasmid pGXEC6, complete sequence	22962-22991	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_KM212169	Escherichia coli strain 8ZG6D plasmid pSD11, complete sequence	22245-22274	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_KM580532	Escherichia coli strain GXEC3 plasmid pGXEC3, complete sequence	22962-22991	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	LC477138	Escherichia coli A1 plasmid pA1 DNA, complete sequence	19365-19394	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	LC477294	Escherichia coli A2 plasmid pA2 DNA, complete sequence	19365-19394	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	LC479085	Escherichia coli B2 plasmid pB2 DNA, complete sequence	19365-19394	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_CP045764	Salmonella enterica subsp. enterica serovar Heidelberg str. 41578 plasmid p2CFSAN000318, complete sequence	13959-13988	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_CP025853	Escherichia coli strain 510016 plasmid p510016_36, complete sequence	2470-2499	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_CP048333	Escherichia coli strain 10 plasmid p010_C, complete sequence	19162-19191	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_KT754165	Shigella dysenteriae 1 strain 93-531-1 plasmid p93-531-1, complete sequence	32129-32158	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_CP053735	Escherichia coli strain CP55_Sichuan plasmid pCP55-IncX4, complete sequence	31526-31555	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_CP029728	Citrobacter sp. CRE-46 strain AR_0157 plasmid unnamed8, complete sequence	4895-4924	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_CP044406	Escherichia coli strain NMBU-W10C18 plasmid pNMBU-W10C18_04, complete sequence	7091-7120	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	MK875281	Escherichia coli strain MFDS1338 plasmid pMFDS1338.1, complete sequence	20892-20921	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	MK875282	Escherichia coli strain MFDS1318 plasmid pMFDS1318.1, complete sequence	10467-10496	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	MK875283	Escherichia coli strain MFDS1316 plasmid pMFDS1316.1, complete sequence	20494-20523	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	MK875284	Escherichia coli strain MFDS1310 plasmid pMFDS1310.1, complete sequence	10552-10581	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	MK875285	Escherichia coli strain MFDS1300 plasmid pMFDS1300.1, complete sequence	10467-10496	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	MK875286	Escherichia coli strain MFDS1029 plasmid pMFDS1029.1, complete sequence	10467-10496	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	LC341397	Escherichia coli plasmid pEC15-101mcr DNA, complete sequence	19353-19382	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_CP026769	Shigella flexneri Y strain 93-3063 plasmid unnamed1	13549-13578	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_CP028174	Salmonella enterica strain CFSAN064033 plasmid pGMI17-001_2, complete sequence	27191-27220	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	AP018411	Klebsiella pneumoniae plasmid pRYU3223C-1 RYU 3223 DNA, complete sequence	19366-19395	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	CP042644	Escherichia coli strain NCYU-24-74 plasmid pNCYU-24-74-6_MCR1, complete sequence	32149-32178	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	MN200943	Escherichia coli strain E648 plasmid pE648MCR-1, complete sequence	19333-19362	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NC_013718	Citrobacter rodentium ICC168 plasmid pCROD2, complete sequence	29378-29407	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_CP019016	Escherichia coli strain Ecol_244 plasmid pEC244_4, complete sequence	28836-28865	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_CP037911	Escherichia coli strain YSP8-1 plasmid pYSP8-1, complete sequence	101284-101313	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_CP041105	Klebsiella pneumoniae subsp. pneumoniae strain KPCTRSRTH07 plasmid unnamed6, complete sequence	6928-6957	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	MK836307	Escherichia coli strain NMG38 plasmid pMCR-NMG38, complete sequence	9576-9605	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_CP045460	Salmonella enterica subsp. enterica serovar Anatum strain M-3471 plasmid pM-3471_MCR33k, complete sequence	27190-27219	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_CP046719	Escherichia coli strain T16R plasmid pT16R-3, complete sequence	31526-31555	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	LC511656	Escherichia coli 2017-02-2CC plasmid p2017-02-2CC DNA, complete genome	32605-32634	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	LC511660	Escherichia coli 2017.19.01CC plasmid p2017.19.01CC DNA, complete genome	2258-2287	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	LC511661	Escherichia coli 2018-06-1CC plasmid p2018-06-1CC DNA, complete genome	25811-25840	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	KX555451	Escherichia coli plasmid pMCR-11EC-P293, complete sequence	21907-21936	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	KX555452	Escherichia coli plasmid pMCR-13EC-C962A, complete sequence	19480-19509	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_LT985318	Escherichia coli strain ECOR 30 genome assembly, plasmid: RCS96_p	21954-21983	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	MK172815	Escherichia coli plasmid pMCR-1_Msc, complete sequence	11033-11062	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_CP023373	Escherichia coli strain 1283 plasmid p31, complete sequence	17418-17447	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_CP024041	Klebsiella pneumoniae strain QS17-0029 plasmid pMR0617mcr, complete sequence	20731-20760	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_CP027257	Escherichia coli strain EC11 plasmid unnamed2, complete sequence	20499-20528	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_CP019072	Escherichia coli strain CRE1493 plasmid p1493-1, complete sequence	19914-19943	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_CP023905	Escherichia coli strain FDAARGOS_433 plasmid unnamed5, complete sequence	24672-24701	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	CP025925	Escherichia coli strain 520873 plasmid p520873_36, complete sequence	26808-26837	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	CP025875	Escherichia coli strain 503458 plasmid p503458_37, complete sequence	24005-24034	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_CP023380	Escherichia coli strain 127 plasmid p43, complete sequence	28572-28601	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NC_021841	Salmonella enterica subsp. enterica serovar Heidelberg str. 41578 plasmid pSEEH1578_02, complete sequence	32349-32378	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_CP047664	Escherichia coli strain LD93-1 plasmid pLD93-1-MCR1, complete sequence	25811-25840	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	MG557852	Escherichia coli plasmid PN23, complete sequence	19477-19506	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	MG557853	Escherichia coli plasmid PN25, complete sequence	9981-10010	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_CP040594	Klebsiella pneumoniae subsp. pneumoniae strain KpvST15_NDM plasmid unnamed1, complete sequence	26576-26605	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_CP029976	Escherichia coli strain 51008369SK1 plasmid p51008369SK1_C, complete sequence	18902-18931	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_CP030795	Salmonella enterica strain 2017K-0021 plasmid pMCR-1-CTSe, complete sequence	9154-9183	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_CP021735	Escherichia coli strain AR_0114 plasmid unitig_4, complete sequence	3746-3775	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_CP026942	Escherichia coli strain CFS3313 plasmid pCFS3313-3, complete sequence	17819-17848	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_CP037906	Escherichia coli strain LHM10-1 plasmid pLHM10-1-MCR-1, complete sequence	12017-12046	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NC_021079	Klebsiella pneumoniae strain Kp002 plasmid pJEG012, complete sequence	29079-29108	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_LT985276	Escherichia coli strain 707 plasmid RCS67_p, complete sequence	47655-47684	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_MK477604	Salmonella enterica strain SH15G1397 plasmid pSH15G1397, complete sequence	19365-19394	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_MK477610	Salmonella enterica strain SH15G2167 plasmid pSH15G2167, complete sequence	19365-19394	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_MK477615	Salmonella enterica strain SH16G1509 plasmid pSH16G1509, complete sequence	19365-19394	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_MH938808	Escherichia coli strain LHM10-1 plasmid pLHM10-1-mcr-1, complete sequence	12017-12046	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	KU761327	Klebsiella pneumoniae strain SZ04 plasmid pmcr1_IncX4, complete sequence	19365-19394	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_MF978387	Escherichia coli strain GDT6F49 plasmid pHNGDF49, complete sequence	20483-20512	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_MF175184	Escherichia coli strain PF91 plasmid pPF91, complete sequence	19366-19395	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_MG257881	Escherichia coli strain P744T plasmid pP744T-MCR1, complete sequence	19365-19394	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_MF774182	Escherichia coli strain SHP10 plasmid pHNSHP10, complete sequence	20331-20360	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_MG210937	Escherichia coli strain GZ49260 plasmid pGZ49260, complete sequence	19365-19394	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_MF175190	Escherichia coli strain ColR598 plasmid pColR598_1, complete sequence	19359-19388	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_MF175191	Escherichia coli strain CDF8 plasmid pCDF8, complete sequence	19716-19745	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_MF381176	Escherichia coli strain V163 plasmid pV163M, complete sequence	23524-23553	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_MF774188	Escherichia coli strain SHP49 plasmid pHNSHP49, complete sequence	20331-20360	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_MF381175	Escherichia coli strain V163 plasmid pV163M deltamcr-1, complete sequence	21898-21927	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_MF774184	Escherichia coli strain SHP23 plasmid pHNSHP23, complete sequence	20331-20360	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_MH061196	Klebsiella pneumoniae strain AHM7C25I plasmid pHNAH25I-MCR, complete sequence	20727-20756	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_MG210939	Escherichia coli strain GZ49269 plasmid pGZ49269, complete sequence	19914-19943	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_KY865319	Escherichia coli strain SY3018 plasmid pEC14cfr, complete sequence	22232-22261	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_MF175185	Escherichia coli strain PF52 plasmid pPF52, complete sequence	19356-19385	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_MF175186	Escherichia coli strain PF11 plasmid pPF11, complete sequence	19366-19395	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_KX894453	Escherichia coli strain IHIT31346 plasmid pMCR-1-IHIT35346, complete sequence	13551-13580	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_KX570748	Escherichia coli strain ECMY3 plasmid pECMCR-1101, complete sequence	11999-12028	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_KY012276	Escherichia coli strain 18HAE25 plasmid pEc_18HAE25, complete sequence	13532-13561	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_KY463454	Escherichia coli strain WCHEC050618 plasmid pMCR_WCHEC1618, complete sequence	22121-22150	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_KY565556	Escherichia coli strain Mcp0271 plasmid pMcp0271, complete sequence	20732-20761	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_KY770023	Escherichia coli strain ICBEC2AM plasmid pICBEC2AM, complete sequence	12318-12347	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_KY463451	Escherichia coli strain WCHEC050606 plasmid pMCR_WCHEC1606, complete sequence	22121-22150	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_KY770024	Escherichia coli strain ICBEC3AM plasmid pICBEC3AM, complete sequence	12557-12586	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_KY652381	Escherichia coli strain WCHEC050622 plasmid pIncX4_WCHEC1622, complete sequence	19749-19778	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_KY770025	Escherichia coli strain ICBEC13AM plasmid pICBEC13AM, complete sequence	14330-14359	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_LT838201	Escherichia coli isolate WI2 isolate plasmid pWI2-mcr, complete sequence	10484-10513	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_CP028167	Escherichia coli strain CFSAN064036 plasmid pGMI17-004_2, complete sequence	18353-18382	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_KU743383	Escherichia coli strain ENV-187 plasmid pESTMCR, complete sequence	13553-13582	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_KY120364	Salmonella enterica subsp. enterica serovar Typhimurium strain NG14043 plasmid pNG14043, complete sequence	13786-13815	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_KX084392	Escherichia coli strain B65 plasmid pECJS-B65-33, complete sequence	20727-20756	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_KX254343	Escherichia coli strain GD-8 plasmid pECGD-8-33, complete sequence	20736-20765	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_CP024919	Klebsiella pneumoniae strain NH54 plasmid pKPNH54.3, complete sequence	27931-27960	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	LC227558	Escherichia coli plasmid pKT2378 DNA, complete sequence, strain: KT2378	12909-12938	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_CP011290	Salmonella enterica subsp. diarizonae strain 11-01853 plasmid unnamed1, complete sequence	20360-20389	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_CP038181	Escherichia coli strain 2 HS-C plasmid p2HS-C-1, complete sequence	4779-4808	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_CP026728	Escherichia coli strain 266917_2 plasmid p266917_2_05, complete sequence	8445-8474	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	MK574665	Escherichia coli strain DIB-1 plasmid pDIB-1, complete sequence	22215-22244	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	MN648330	Klebsiella pneumoniae strain T38 plasmid pT38-MCR-1, complete sequence	31971-32000	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_CP042647	Escherichia coli strain NCYU-21-79 plasmid pNCYU-21-79-2_MCR1, complete sequence	19019-19048	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	MN232194	Escherichia coli plasmid pGD27-69, complete sequence	13551-13580	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_CP035754	Escherichia coli E110019 plasmid pE110019_33, complete sequence	4506-4535	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_CP044138	Escherichia coli O157 strain AR-0430 plasmid pAR-0430-2, complete sequence	33762-33791	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_CP042607	Escherichia coli strain NCYU-29-19 plasmid pNCYU-29-19-1_MCR1, complete sequence	24282-24311	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_CP033357	Salmonella enterica subsp. enterica strain EQAS2016S1 plasmid pEQAS2016S1-2, complete sequence	12697-12726	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_CP031616	Klebsiella pneumoniae strain ZYST1 plasmid pZYST1C3, complete sequence	19364-19393	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_CP024861	Escherichia coli strain AR_0014 plasmid unitig_2_pilon, complete sequence	24242-24271	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_CP034833	Salmonella sp. SSDFZ69 plasmid pTB602, complete sequence	13552-13581	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_CP024149	Escherichia coli strain 14EC033 plasmid p14EC033b, complete sequence	5958-5987	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_LR025103	Escherichia coli isolate EC-1639 plasmid 4, complete sequence	17768-17797	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_CP040725	Klebsiella pneumoniae strain KpvST147B_SE1_1_NDM plasmid pKpvST147B_3, complete sequence	27484-27513	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_CP018950	Escherichia coli strain Ecol_276 plasmid pEC276_3, complete sequence	11339-11368	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NC_019128	Salmonella enterica subsp. enterica serovar Heidelberg plasmid pSH696_34, complete sequence	25540-25569	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NC_019129	Salmonella enterica subsp. enterica serovar Heidelberg plasmid pSH146_32, complete sequence	24431-24460	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NC_019130	Salmonella enterica subsp. enterica serovar Heidelberg plasmid pSH163_34, complete sequence	25538-25567	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_CP022346	Bacillus thuringiensis strain c25 plasmid unnamed1, complete sequence	266689-266718	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	CP042970	Escherichia coli strain CFSAN061769 plasmid pCFSAN061769_01, complete sequence	22837-22866	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_CP024462	Klebsiella pneumoniae strain QS17-0161 plasmid pMR0617mcr1, complete sequence	13909-13938	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_LS992170	Escherichia coli isolate Escherichia coli str. TO60 plasmid 3, complete sequence	9921-9950	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_LS992170	Escherichia coli isolate Escherichia coli str. TO60 plasmid 3, complete sequence	43344-43373	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	MK940857	Escherichia coli strain 11 plasmid unnamed, complete sequence	12557-12586	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	MK940858	Escherichia coli strain 91 plasmid unnamed, complete sequence	12557-12586	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	MG557854	Escherichia coli plasmid PN42, complete sequence	11498-11527	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	AP023229	Escherichia coli YJ3 plasmid pYJ3-b DNA, complete genome	32075-32104	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_CP021418	Escherichia coli strain ICBEC171S plasmid pICBEC171Smcr, complete sequence	10561-10590	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_CP047612	Escherichia coli strain NMBU_ W06E18 plasmid pNMBU_W06E18_Str1_3, complete sequence	31066-31095	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_CP024132	Escherichia coli strain 14EC007 plasmid p14EC007a, complete sequence	12544-12573	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_CP033349	Salmonella enterica subsp. enterica strain CFSA231 plasmid pCFSA231, complete sequence	12623-12652	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_CP021419	Escherichia coli strain ICBEC12-3F plasmid pICBEC12-3mcr, complete sequence	12557-12586	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_CP033849	Escherichia coli strain FDAARGOS_497 plasmid unnamed3, complete sequence	21835-21864	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_CP019908	Escherichia coli strain MDR_56 plasmid pMCR1-NY, complete sequence	17952-17981	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NC_010657	Shigella boydii CDC 3083-94 plasmid pBS512_33, complete sequence	24609-24638	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_CP016550	Escherichia coli strain O177:H21 plasmid unnamed4, complete sequence	31130-31159	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_CP020376	Escherichia coli strain ICBEC79H plasmid pICBEC79Hmcr, complete sequence	10477-10506	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	CP052800	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S990 plasmid pN17S0990-2, complete sequence	31343-31372	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_MH143576	Salmonella enterica subsp. enterica serovar California strain SL01 plasmid pMCR-1, complete sequence	26598-26627	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_MH043624	Escherichia coli strain GDZJ003 plasmid pGDZJ003-1-MCR-1, complete sequence	20870-20899	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_MF449287	Escherichia coli strain T71115 plasmid pIBMC_mcr1, complete sequence	22507-22536	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_MF136779	Escherichia coli strain HKSHmcr1_P2_EC plasmid pHKSHmcr1_P2_p2, complete sequence	12555-12584	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_MG825367	Escherichia coli strain 787 plasmid p787-MCR, complete sequence	8459-8488	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_MH522422	Salmonella enterica subsp. enterica serovar Typhimurium strain SH16G2543 plasmid pSH16G2543, complete sequence	13046-13075	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_MH522417	Salmonella enterica subsp. enterica serovar Typhimurium strain SH15G2169 plasmid pSH15G2169, complete sequence	10561-10590	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_KY689634	Escherichia coli strain 31349 plasmid p31349, complete sequence	20732-20761	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_KY582848	Escherichia coli strain WCHEC050604 plasmid pMCR_WCHEC1604-IncX4, complete sequence	20041-20070	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_KY964067	Escherichia coli strain LV23529 plasmid pLV23529-MCR-1.9, complete sequence	12557-12586	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_MF093645	Escherichia coli strain 288328 plasmid pMCR-1.2-IT-Ec, complete sequence	13000-13029	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_MG747473	Escherichia coli strain 13-43 plasmid pE13-43-mcr-1, complete sequence	10270-10299	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	NZ_CP023829	Escherichia coli strain 4/4 plasmid p4_4.3, complete sequence	24609-24638	8	0.733
NZ_CP011456_16	16.1\|2584930\|30\|NZ_CP011456\|CRISPRCasFinder	2584930-2584959	30	CP052790	Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0552 plasmid pN19S0552-2, complete sequence	13189-13218	8	0.733
NZ_CP011456_20	20.1\|2752824\|30\|NZ_CP011456\|CRISPRCasFinder	2752824-2752853	30	NZ_CP039294	Pseudomonas aeruginosa strain PABL048 plasmid pPABL048, complete sequence	408505-408534	8	0.733
NZ_CP011456_26	26.1\|3030770\|30\|NZ_CP011456\|CRISPRCasFinder	3030770-3030799	30	NZ_CP017076	Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence	1680777-1680806	8	0.733
NZ_CP011456_26	26.1\|3030770\|30\|NZ_CP011456\|CRISPRCasFinder	3030770-3030799	30	NZ_CP016453	Sphingobium sp. RAC03 plasmid pBSY17_1, complete sequence	64083-64112	8	0.733
NZ_CP011456_26	26.1\|3030770\|30\|NZ_CP011456\|CRISPRCasFinder	3030770-3030799	30	NZ_CP016453	Sphingobium sp. RAC03 plasmid pBSY17_1, complete sequence	646951-646980	8	0.733
NZ_CP011456_26	26.1\|3030770\|30\|NZ_CP011456\|CRISPRCasFinder	3030770-3030799	30	NZ_CP024183	Moraxella osloensis strain KSH plasmid p3, complete sequence	42013-42042	8	0.733
NZ_CP011456_26	26.1\|3030770\|30\|NZ_CP011456\|CRISPRCasFinder	3030770-3030799	30	NZ_CP024447	Moraxella osloensis strain NP7 plasmid pNP7-4, complete sequence	30721-30750	8	0.733
NZ_CP011456_26	26.1\|3030770\|30\|NZ_CP011456\|CRISPRCasFinder	3030770-3030799	30	NZ_AP017383	Moraxella osloensis strain KMC41 plasmid pMOSL2, complete sequence	22650-22679	8	0.733
NZ_CP011456_26	26.1\|3030770\|30\|NZ_CP011456\|CRISPRCasFinder	3030770-3030799	30	NZ_CP024186	Moraxella osloensis strain TT16 plasmid p1, complete sequence	41861-41890	8	0.733
NZ_CP011456_26	26.1\|3030770\|30\|NZ_CP011456\|CRISPRCasFinder	3030770-3030799	30	NZ_AP014706	Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_2p, complete sequence	380612-380641	8	0.733
NZ_CP011456_26	26.1\|3030770\|30\|NZ_CP011456\|CRISPRCasFinder	3030770-3030799	30	NZ_CP024177	Moraxella osloensis strain YHS plasmid pYHS1, complete sequence	41829-41858	8	0.733
NZ_CP011456_30	30.1\|3467111\|34\|NZ_CP011456\|PILER-CR,CRISPRCasFinder	3467111-3467144	34	MG945424	UNVERIFIED: Microviridae sp. isolate 4374-1801, complete genome	4340-4373	8	0.765
NZ_CP011456_31	31.5\|3594564\|32\|NZ_CP011456\|PILER-CR,CRISPRCasFinder,CRT	3594564-3594595	32	AP013427	Uncultured Mediterranean phage uvMED DNA, complete genome, group G16, isolate: uvMED-CGR-C57A-MedDCM-OCT-S25-C28	12643-12674	8	0.75
NZ_CP011456_31	31.5\|3594564\|32\|NZ_CP011456\|PILER-CR,CRISPRCasFinder,CRT	3594564-3594595	32	AP013428	Uncultured Mediterranean phage uvMED DNA, complete genome, group G16, isolate: uvMED-CGR-C57A-MedDCM-OCT-S39-C32	13287-13318	8	0.75
NZ_CP011456_48	48.5\|5686390\|31\|NZ_CP011456\|CRT	5686390-5686420	31	NZ_CP033067	Pseudoalteromonas agarivorans strain Hao 2018 plasmid unnamed, complete sequence	56907-56937	8	0.742
NZ_CP011456_5	5.3\|886241\|34\|NZ_CP011456\|PILER-CR,CRISPRCasFinder,CRT	886241-886274	34	NZ_CP010578	Bacillus thuringiensis serovar morrisoni strain BGSC 4AA1 plasmid pBMB232, complete sequence	73724-73757	9	0.735
NZ_CP011456_26	26.1\|3030770\|30\|NZ_CP011456\|CRISPRCasFinder	3030770-3030799	30	NZ_CP017076	Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence	1627936-1627965	9	0.7
NZ_CP011456_26	26.1\|3030770\|30\|NZ_CP011456\|CRISPRCasFinder	3030770-3030799	30	NZ_CP054841	Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence	159290-159319	9	0.7
NZ_CP011456_26	26.1\|3030770\|30\|NZ_CP011456\|CRISPRCasFinder	3030770-3030799	30	NZ_CP054841	Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence	264385-264414	9	0.7
NZ_CP011456_26	26.1\|3030770\|30\|NZ_CP011456\|CRISPRCasFinder	3030770-3030799	30	NC_015597	Sinorhizobium meliloti AK83 plasmid pSINME01, complete sequence	77763-77792	9	0.7
NZ_CP011456_26	26.1\|3030770\|30\|NZ_CP011456\|CRISPRCasFinder	3030770-3030799	30	NZ_AP018666	Sphingobium amiense strain DSM 16289 plasmid pSAMIE_3, complete sequence	29686-29715	9	0.7
NZ_CP011456_26	26.1\|3030770\|30\|NZ_CP011456\|CRISPRCasFinder	3030770-3030799	30	NZ_CP018821	Sphingomonas koreensis strain ABOJV plasmid tig00000001, complete sequence	65379-65408	9	0.7
NZ_CP011456_26	26.1\|3030770\|30\|NZ_CP011456\|CRISPRCasFinder	3030770-3030799	30	NZ_CP023451	Rhizorhabdus dicambivorans strain Ndbn-20 plasmid p2, complete sequence	227798-227827	9	0.7
NZ_CP011456_26	26.1\|3030770\|30\|NZ_CP011456\|CRISPRCasFinder	3030770-3030799	30	CP021185	Sphingomonas wittichii DC-6 plasmid pDC04, complete sequence	52595-52624	9	0.7
NZ_CP011456_26	26.1\|3030770\|30\|NZ_CP011456\|CRISPRCasFinder	3030770-3030799	30	NZ_CP051207	Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence	9974-10003	9	0.7
NZ_CP011456_35	35.1\|3991818\|35\|NZ_CP011456\|CRISPRCasFinder	3991818-3991852	35	NC_019777	Cyanobacterium aponinum PCC 10605 plasmid pCYAN10605.01, complete sequence	54961-54995	9	0.743
NZ_CP011456_43	43.1\|5246024\|30\|NZ_CP011456\|CRISPRCasFinder	5246024-5246053	30	NZ_CP053953	Bacillus cereus strain FDAARGOS_798 plasmid unnamed2, complete sequence	22148-22177	9	0.7
NZ_CP011456_43	43.1\|5246024\|30\|NZ_CP011456\|CRISPRCasFinder	5246024-5246053	30	NZ_CP053950	Bacillus cereus strain FDAARGOS_799 plasmid unnamed2, complete sequence	244518-244547	9	0.7
NZ_CP011456_30	30.1\|3467111\|34\|NZ_CP011456\|PILER-CR,CRISPRCasFinder	3467111-3467144	34	MT661596	Proteus phage 10, complete genome	66222-66255	10	0.706
NZ_CP011456_30	30.2\|3467182\|36\|NZ_CP011456\|PILER-CR,CRISPRCasFinder	3467182-3467217	36	NZ_CP030090	Lactobacillus reuteri strain YSJL-12 plasmid unnamed1, complete sequence	9274-9309	10	0.722
NZ_CP011456_31	31.6\|3594633\|34\|NZ_CP011456\|PILER-CR,CRISPRCasFinder,CRT	3594633-3594666	34	NC_028887	Bacillus phage AvesoBmore, complete genome	6352-6385	10	0.706
NZ_CP011456_31	31.6\|3594633\|34\|NZ_CP011456\|PILER-CR,CRISPRCasFinder,CRT	3594633-3594666	34	NC_022088	Bacillus phage Troll, complete genome	6748-6781	10	0.706
NZ_CP011456_30	30.1\|3467111\|34\|NZ_CP011456\|PILER-CR,CRISPRCasFinder	3467111-3467144	34	KF301602	Caulobacter phage Cr30, complete genome	136349-136382	11	0.676
NZ_CP011456_38	38.12\|4548629\|35\|NZ_CP011456\|CRISPRCasFinder,CRT	4548629-4548663	35	AP014311	Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S30-C44, * SEQUENCING IN PROGRESS *	34012-34046	11	0.686

1. spacer 38.1|4547822|41|NZ_CP011456|CRISPRCasFinder,CRT matches to MG209611 (Aphanizomenon phage vB_AphaS-CL131, complete genome) position: , mismatch: 0, identity: 1.0

tgcctgttgcaaaacttaaatctgacatggtagttgacctt	CRISPR spacer
tgcctgttgcaaaacttaaatctgacatggtagttgacctt	Protospacer
*****************************************

2. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to KY555144 (Caulobacter phage Ccr5, complete genome) position: , mismatch: 3, identity: 0.885

-gaatgggcgcagtccctgcgccccta	CRISPR spacer
cggat-ggcgcaggccctgcgccccta	Protospacer
 *.** ******* *************

3. spacer 45.1|5407068|31|NZ_CP011456|CRISPRCasFinder matches to NC_020157 (Anabaena cylindrica PCC 7122 plasmid pANACY.02, complete sequence) position: , mismatch: 3, identity: 0.903

actcctgatagcgcagcgtggcgttagccat	CRISPR spacer
agtgctgatagcgcagcgtggcgtaagccat	Protospacer
* * ******************** ******

4. spacer 37.1|4446782|25|NZ_CP011456|CRISPRCasFinder matches to NZ_CP040345 (Bacillus albus strain DLOU-Yingkou plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.84

cttaaaacgtgatcattacgtattg	CRISPR spacer
tataaaacgtaatcattacgttttg	Protospacer
. ********.********** ***

5. spacer 37.1|4446782|25|NZ_CP011456|CRISPRCasFinder matches to NZ_CP053657 (Bacillus cereus strain CTMA_1571 plasmid p.1, complete sequence) position: , mismatch: 4, identity: 0.84

cttaaaacgtgatcattacgtattg	CRISPR spacer
actaaaacgtaatcattacgttttg	Protospacer
 .********.********** ***

6. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to NZ_CP020385 (Rhodovulum sp. MB263 plasmid pRSMBA, complete sequence) position: , mismatch: 4, identity: 0.846

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gaatgggcgcaggccccgcgccccgg	Protospacer
************ ***.******* .

7. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP053316 (Bacillus circulans strain GN03 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.833

gcatcct-gattctgacaaaataaagtatca	CRISPR spacer
-catgatggattcagtcaaaataaagtatca	Protospacer
 ***  * ***** * ***************

8. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to NZ_CP050081 (Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b5, complete sequence) position: , mismatch: 5, identity: 0.808

gaatgggcgcagtccctgcgccccta	CRISPR spacer
ggatgggcgcaatccctgcgcccagt	Protospacer
*.*********.***********

9. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to NZ_CP053206 (Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1D, complete sequence) position: , mismatch: 5, identity: 0.808

gaatgggcgcagtccctgcgccccta	CRISPR spacer
ggatgggcgcaatccctgcgcccagt	Protospacer
*.*********.***********

10. spacer 45.1|5407068|31|NZ_CP011456|CRISPRCasFinder matches to NC_003240 (Nostoc sp. PCC 7120 = FACHB-418 plasmid pCC7120beta, complete sequence) position: , mismatch: 5, identity: 0.839

actcctgatagcgcagcgtggcgttagccat	CRISPR spacer
gttgctgttagcgcagcttggcgttagccat	Protospacer
..* *** ********* *************

11. spacer 45.1|5407068|31|NZ_CP011456|CRISPRCasFinder matches to NZ_CP020115 (Nodularia spumigena UHCC 0039 plasmid pUHCC0039a, complete sequence) position: , mismatch: 5, identity: 0.839

actcctgatagcgcagcgtggcgttagccat	CRISPR spacer
gattccgatagcgtagcgtggcgttagccat	Protospacer
. *.*.*******.*****************

12. spacer 45.1|5407068|31|NZ_CP011456|CRISPRCasFinder matches to NZ_CP020115 (Nodularia spumigena UHCC 0039 plasmid pUHCC0039a, complete sequence) position: , mismatch: 5, identity: 0.839

actcctgatagcgcagcgtggcgttagccat	CRISPR spacer
gattccgatagcgtagcgtggcgttagccat	Protospacer
. *.*.*******.*****************

13. spacer 6.1|957095|33|NZ_CP011456|CRISPRCasFinder matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 6, identity: 0.818

-atcatcgtatcccttctccgtaggggcgcaggg	CRISPR spacer
gcgcatcg-atcccttcgccggaggggcgcaggc	Protospacer
   ***** ******** *** ***********

14. spacer 7.1|968531|27|NZ_CP011456|CRISPRCasFinder matches to NZ_CP031268 (Staphylococcus warneri strain 16A plasmid unnamed2) position: , mismatch: 6, identity: 0.778

ccacctgcacctgtagcacctgaaccg	CRISPR spacer
gcaacagcacctgtagcacctgaaatc	Protospacer
 ** * ****************** .

15. spacer 7.1|968531|27|NZ_CP011456|CRISPRCasFinder matches to MN693958 (Marine virus AFVG_250M1164, complete genome) position: , mismatch: 6, identity: 0.778

ccacctgcacctgtagcacctgaaccg	CRISPR spacer
gcacctgtaccagtagcacctgaagtt	Protospacer
 ******.*** ************ .

16. spacer 7.1|968531|27|NZ_CP011456|CRISPRCasFinder matches to MN694724 (Marine virus AFVG_250M441, complete genome) position: , mismatch: 6, identity: 0.778

ccacctgcacctgtagcacctgaaccg	CRISPR spacer
gcacctgtaccagtagcacctgaagtt	Protospacer
 ******.*** ************ .

17. spacer 26.1|3030770|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP017076 (Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence) position: , mismatch: 6, identity: 0.8

cgatgccctgagcctgtcgaagggtcgaag	CRISPR spacer
gctcaccctgagcctgtcgaagggtcgcag	Protospacer
   ..********************** **

18. spacer 26.1|3030770|30|NZ_CP011456|CRISPRCasFinder matches to NZ_AP018521 (Sphingobium sp. YG1 plasmid pYGP2, complete sequence) position: , mismatch: 6, identity: 0.8

cgatgccctgagcctgtcgaagggtcgaag	CRISPR spacer
ccctgtcctgagcctgtcgaaggatcgccg	Protospacer
*  **.*****************.***  *

19. spacer 26.1|3030770|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP012699 (Microbacterium sp. No. 7 plasmid B, complete sequence) position: , mismatch: 6, identity: 0.8

-cgatgccctgagcctgtcgaagggtcgaag	CRISPR spacer
acggt-ccctgagcctgtcgaagggccgcgc	Protospacer
 **.* *******************.** .

20. spacer 38.3|4547970|35|NZ_CP011456|CRISPRCasFinder,CRT matches to CP027117 (Bacillus phage EZ-2018a, complete genome) position: , mismatch: 6, identity: 0.829

gagaaaacaaagattttaatatccctcagataacc	CRISPR spacer
gaagtaaaaaagattttaatatcccttagataagc	Protospacer
**.. ** ******************.****** *

21. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to NZ_CP049731 (Rhizobium leguminosarum strain A1 plasmid pRL12, complete sequence) position: , mismatch: 6, identity: 0.769

gaatgggcgcagtccctgcgccccta	CRISPR spacer
cgatgggcgcaatccctgcgcccagt	Protospacer
 .*********.***********

22. spacer 42.1|4903318|31|NZ_CP011456|CRISPRCasFinder matches to MN693090 (Marine virus AFVG_25M23, complete genome) position: , mismatch: 6, identity: 0.806

tcaattatctatctgttaaatatttactgag	CRISPR spacer
ttaagtatctatcggttaaatatttgttaag	Protospacer
*.** ******** ***********..*.**

23. spacer 45.1|5407068|31|NZ_CP011456|CRISPRCasFinder matches to NZ_CP011457 (Anabaena sp. WA102 plasmid, complete sequence) position: , mismatch: 6, identity: 0.806

actcctgatagcgcagcgtggcgttagccat	CRISPR spacer
ggcattgatagcgcagcgtggcgtaagccat	Protospacer
. . .******************* ******

24. spacer 45.1|5407068|31|NZ_CP011456|CRISPRCasFinder matches to NZ_CP051207 (Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence) position: , mismatch: 6, identity: 0.806

actcctgatagcgcagcgtggcgttagccat	CRISPR spacer
cttgtcgatagcgaagcgtggcgttagccat	Protospacer
 .* ..******* *****************

25. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NC_019429 (Anabaena sp. 90 plasmid pANA02, complete sequence) position: , mismatch: 7, identity: 0.767

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
atatcctgattctgacaaaaaaatttttct	Protospacer
..****************** **  * **

26. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to MN871441 (UNVERIFIED: Aeromonas phage AsSzw2, complete genome) position: , mismatch: 7, identity: 0.767

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
tcaccctgattctgacaaaaaaaaaaaaaa	Protospacer
 **.**************** ***. *  *

27. spacer 26.1|3030770|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP017076 (Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence) position: , mismatch: 7, identity: 0.767

cgatgccctgagcctgtcgaagggtcgaag	CRISPR spacer
gctcaccctgagcttgtcgaagggtcgcag	Protospacer
   ..********.************* **

28. spacer 26.1|3030770|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP024182 (Moraxella osloensis strain KSH plasmid p2, complete sequence) position: , mismatch: 7, identity: 0.767

cgatgccctgagcctgtcgaagggtcgaag	CRISPR spacer
gctcgccctgagcctgtcgaagggtggcgg	Protospacer
   .********************* * .*

29. spacer 26.1|3030770|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP024187 (Moraxella osloensis strain TT16 plasmid p2, complete sequence) position: , mismatch: 7, identity: 0.767

cgatgccctgagcctgtcgaagggtcgaag	CRISPR spacer
gctcgccctgagcctgtcgaagggtggcgg	Protospacer
   .********************* * .*

30. spacer 26.1|3030770|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP016453 (Sphingobium sp. RAC03 plasmid pBSY17_1, complete sequence) position: , mismatch: 7, identity: 0.767

cgatgccctgagcctgtcgaagggtcgaag	CRISPR spacer
gttcgccctgagcctgtcgaagggccgcac	Protospacer
   .********************.** *

31. spacer 26.1|3030770|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP024178 (Moraxella osloensis strain YHS plasmid pYHS2, complete sequence) position: , mismatch: 7, identity: 0.767

cgatgccctgagcctgtcgaagggtcgaag	CRISPR spacer
gctcgccctgagcctgtcgaagggtggcgg	Protospacer
   .********************* * .*

32. spacer 26.1|3030770|30|NZ_CP011456|CRISPRCasFinder matches to NZ_AP017382 (Moraxella osloensis strain KMC41 plasmid pMOSL1, complete sequence) position: , mismatch: 7, identity: 0.767

cgatgccctgagcctgtcgaagggtcgaag	CRISPR spacer
gctcgccctgagcctgtcgaagggtggcgg	Protospacer
   .********************* * .*

33. spacer 26.1|3030770|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP054841 (Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

cgatgccctgagcctgtcgaagggtcgaag	CRISPR spacer
cctgatcctgagcttgtcgaaggatcgaag	Protospacer
*   ..*******.*********.******

34. spacer 26.1|3030770|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP024449 (Moraxella osloensis strain NP7 plasmid pNP7-6, complete sequence) position: , mismatch: 7, identity: 0.767

cgatgccctgagcctgtcgaagggtcgaag	CRISPR spacer
gctcgccctgagcctgtcgaagggtggcgg	Protospacer
   .********************* * .*

35. spacer 30.1|3467111|34|NZ_CP011456|PILER-CR,CRISPRCasFinder matches to NZ_CP029455 (Bacillus cereus strain FORC087 plasmid pFORC087.1, complete sequence) position: , mismatch: 7, identity: 0.794

gatccagaaccaacagaagcagtagaaggccacc-	CRISPR spacer
gatccaggaccaacagaagaagta-catgccataa	Protospacer
*******.*********** ****  * ****.

36. spacer 30.1|3467111|34|NZ_CP011456|PILER-CR,CRISPRCasFinder matches to NZ_CP022346 (Bacillus thuringiensis strain c25 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.794

gatccagaaccaacagaagcagtagaaggccacc-	CRISPR spacer
gatccaggaccaacagaagaagta-catgccataa	Protospacer
*******.*********** ****  * ****.

37. spacer 30.1|3467111|34|NZ_CP011456|PILER-CR,CRISPRCasFinder matches to NC_018689 (Bacillus thuringiensis MC28 plasmid pMC429, complete sequence) position: , mismatch: 7, identity: 0.794

gatccagaaccaacagaagcagtagaaggccacc-	CRISPR spacer
gatccaggaccaacagaagaagta-catgccataa	Protospacer
*******.*********** ****  * ****.

38. spacer 30.1|3467111|34|NZ_CP011456|PILER-CR,CRISPRCasFinder matches to NZ_CP040345 (Bacillus albus strain DLOU-Yingkou plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.794

gatccagaaccaacagaagcagtagaaggccacc-	CRISPR spacer
gatccaggaccaacagaagaagta-catgccataa	Protospacer
*******.*********** ****  * ****.

39. spacer 31.10|3594923|35|NZ_CP011456|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045561 (Acinetobacter nosocomialis strain AC1530 plasmid pAC1530, complete sequence) position: , mismatch: 7, identity: 0.8

-acgtaagggctttttttatatatatcaacaattgt	CRISPR spacer
caca-aagagctttttttatatttatcaactaatat	Protospacer
 **. ***.************* ******* * *.*

40. spacer 31.10|3594923|35|NZ_CP011456|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014478 (Acinetobacter pittii strain AP_882 plasmid pNDM-AP_882, complete sequence) position: , mismatch: 7, identity: 0.8

-acgtaagggctttttttatatatatcaacaattgt	CRISPR spacer
caca-aagagctttttttatatttatcaactaatat	Protospacer
 **. ***.************* ******* * *.*

41. spacer 38.14|4547822|52|NZ_CP011456|PILER-CR matches to MG209611 (Aphanizomenon phage vB_AphaS-CL131, complete genome) position: , mismatch: 7, identity: 0.865

tgcctgttgcaaaacttaaatctgacatggtagttgaccttattcctaatta	CRISPR spacer
tgcctgttgcaaaacttaaatctgacatggtagttgacctttaatctatgca	Protospacer
*****************************************   .***  .*

42. spacer 42.1|4903318|31|NZ_CP011456|CRISPRCasFinder matches to KX160217 (Lactococcus phage 98203, complete genome) position: , mismatch: 7, identity: 0.774

tcaattatctatctgttaaatatttactgag	CRISPR spacer
gcaattatttatctgttaattattttcattg	Protospacer
 *******.********** ***** *   *

43. spacer 45.1|5407068|31|NZ_CP011456|CRISPRCasFinder matches to NC_019428 (Anabaena sp. 90 plasmid pANA01, complete sequence) position: , mismatch: 7, identity: 0.774

actcctgatagcgcagcgtggcgttagccat	CRISPR spacer
ggcattgatagcgcagcgtggcataagccat	Protospacer
. . .*****************.* ******

44. spacer 45.1|5407068|31|NZ_CP011456|CRISPRCasFinder matches to NZ_CP043059 (Dolichospermum sp. UHCC 0315A plasmid pUHCC0315c, complete sequence) position: , mismatch: 7, identity: 0.774

actcctgatagcgcagcgtggcgttagccat	CRISPR spacer
gacattgatagcgcagcgtggcataagccat	Protospacer
. . .*****************.* ******

45. spacer 45.1|5407068|31|NZ_CP011456|CRISPRCasFinder matches to NZ_CP017077 (Novosphingobium resinovorum strain SA1 plasmid pSA2, complete sequence) position: , mismatch: 7, identity: 0.774

actcctgatagcgcagcgtggcgttagccat	CRISPR spacer
tcgactgaaagcgcagcgcggcgttagcgag	Protospacer
 *  **** *********.********* *

46. spacer 48.2|5686246|29|NZ_CP011456|CRT matches to NZ_LR536451 (Methylocella tundrae isolate MTUNDRAET4 annotated genome plasmid 2) position: , mismatch: 7, identity: 0.759

gtaggaatcgctgtttggggatgttggga	CRISPR spacer
gctggaatcgctgtttggcgatgtgcagg	Protospacer
*. *************** *****  .*.

47. spacer 2.1|542882|31|NZ_CP011456|CRISPRCasFinder matches to MH319750 (Marine virus AG-345-F15 Ga0172271_12 genomic sequence) position: , mismatch: 8, identity: 0.742

aatagaggaagtaatacctgaaccagtgatt	CRISPR spacer
acaggcagaagtaataccagaatcagtgata	Protospacer
*  .* .*********** ***.*******

48. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_KX711706 (Escherichia coli strain CSZ4 plasmid pCSZ4, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

49. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_KX711708 (Escherichia coli strain pPY1 plasmid pPY1, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

50. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_KX772777 (Escherichia coli strain E15004 plasmid pE15004, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

51. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_KX711707 (Escherichia coli strain FS170G plasmid pFS170G, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

52. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_KY120363 (Salmonella enterica subsp. enterica serovar Typhimurium strain C214 plasmid pC214, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

53. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_KY075655 (Escherichia coli strain WH03 plasmid pWH03-3, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

54. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_KY075660 (Escherichia coli strain GD65 plasmid pGD65-4, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

55. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_KY471146 (Escherichia coli strain EC111 plasmid pEC111, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

56. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_KX032520 (Escherichia coli strain Af48 isolate B plasmid pAF48, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

57. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_KY075652 (Escherichia coli strain GD46 plasmid pGD46-3, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

58. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_KY075653 (Escherichia coli strain Lishui12 plasmid pLishui12-2, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

59. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_KX236309 (Klebsiella pneumoniae strain KP-6884 plasmid pMCR1.2-IT, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

60. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_KX129783 (Escherichia coli strain OW3E1 plasmid pOW3E1, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

61. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_KX447768 (Escherichia coli strain MCR1_NJ plasmid pMCR1-NJ-IncX4, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

62. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NC_022105 (Escherichia coli strain ECSAM7 plasmid pSAM7, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

63. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_KM580533 (Escherichia coli strain GXEC6 plasmid pGXEC6, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

64. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_KM212169 (Escherichia coli strain 8ZG6D plasmid pSD11, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

65. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_KM580532 (Escherichia coli strain GXEC3 plasmid pGXEC3, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

66. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to LC477138 (Escherichia coli A1 plasmid pA1 DNA, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

67. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to LC477294 (Escherichia coli A2 plasmid pA2 DNA, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

68. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to LC479085 (Escherichia coli B2 plasmid pB2 DNA, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

69. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP045764 (Salmonella enterica subsp. enterica serovar Heidelberg str. 41578 plasmid p2CFSAN000318, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

70. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP025853 (Escherichia coli strain 510016 plasmid p510016_36, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

71. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP048333 (Escherichia coli strain 10 plasmid p010_C, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

72. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_KT754165 (Shigella dysenteriae 1 strain 93-531-1 plasmid p93-531-1, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

73. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP053735 (Escherichia coli strain CP55_Sichuan plasmid pCP55-IncX4, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

74. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP029728 (Citrobacter sp. CRE-46 strain AR_0157 plasmid unnamed8, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

75. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP044406 (Escherichia coli strain NMBU-W10C18 plasmid pNMBU-W10C18_04, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

76. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to MK875281 (Escherichia coli strain MFDS1338 plasmid pMFDS1338.1, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

77. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to MK875282 (Escherichia coli strain MFDS1318 plasmid pMFDS1318.1, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

78. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to MK875283 (Escherichia coli strain MFDS1316 plasmid pMFDS1316.1, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

79. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to MK875284 (Escherichia coli strain MFDS1310 plasmid pMFDS1310.1, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

80. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to MK875285 (Escherichia coli strain MFDS1300 plasmid pMFDS1300.1, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

81. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to MK875286 (Escherichia coli strain MFDS1029 plasmid pMFDS1029.1, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

82. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to LC341397 (Escherichia coli plasmid pEC15-101mcr DNA, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

83. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP026769 (Shigella flexneri Y strain 93-3063 plasmid unnamed1) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

84. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP028174 (Salmonella enterica strain CFSAN064033 plasmid pGMI17-001_2, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

85. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to AP018411 (Klebsiella pneumoniae plasmid pRYU3223C-1 RYU 3223 DNA, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

86. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to CP042644 (Escherichia coli strain NCYU-24-74 plasmid pNCYU-24-74-6_MCR1, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

87. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to MN200943 (Escherichia coli strain E648 plasmid pE648MCR-1, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

88. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NC_013718 (Citrobacter rodentium ICC168 plasmid pCROD2, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

89. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP019016 (Escherichia coli strain Ecol_244 plasmid pEC244_4, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

90. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP037911 (Escherichia coli strain YSP8-1 plasmid pYSP8-1, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

91. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP041105 (Klebsiella pneumoniae subsp. pneumoniae strain KPCTRSRTH07 plasmid unnamed6, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

92. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to MK836307 (Escherichia coli strain NMG38 plasmid pMCR-NMG38, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

93. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP045460 (Salmonella enterica subsp. enterica serovar Anatum strain M-3471 plasmid pM-3471_MCR33k, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

94. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP046719 (Escherichia coli strain T16R plasmid pT16R-3, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

95. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to LC511656 (Escherichia coli 2017-02-2CC plasmid p2017-02-2CC DNA, complete genome) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

96. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to LC511660 (Escherichia coli 2017.19.01CC plasmid p2017.19.01CC DNA, complete genome) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

97. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to LC511661 (Escherichia coli 2018-06-1CC plasmid p2018-06-1CC DNA, complete genome) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

98. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to KX555451 (Escherichia coli plasmid pMCR-11EC-P293, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

99. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to KX555452 (Escherichia coli plasmid pMCR-13EC-C962A, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

100. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_LT985318 (Escherichia coli strain ECOR 30 genome assembly, plasmid: RCS96_p) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

101. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to MK172815 (Escherichia coli plasmid pMCR-1_Msc, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

102. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP023373 (Escherichia coli strain 1283 plasmid p31, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

103. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP024041 (Klebsiella pneumoniae strain QS17-0029 plasmid pMR0617mcr, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

104. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP027257 (Escherichia coli strain EC11 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

105. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP019072 (Escherichia coli strain CRE1493 plasmid p1493-1, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

106. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP023905 (Escherichia coli strain FDAARGOS_433 plasmid unnamed5, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

107. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to CP025925 (Escherichia coli strain 520873 plasmid p520873_36, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

108. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to CP025875 (Escherichia coli strain 503458 plasmid p503458_37, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

109. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP023380 (Escherichia coli strain 127 plasmid p43, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

110. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NC_021841 (Salmonella enterica subsp. enterica serovar Heidelberg str. 41578 plasmid pSEEH1578_02, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

111. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP047664 (Escherichia coli strain LD93-1 plasmid pLD93-1-MCR1, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

112. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to MG557852 (Escherichia coli plasmid PN23, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

113. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to MG557853 (Escherichia coli plasmid PN25, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

114. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP040594 (Klebsiella pneumoniae subsp. pneumoniae strain KpvST15_NDM plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

115. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP029976 (Escherichia coli strain 51008369SK1 plasmid p51008369SK1_C, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

116. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP030795 (Salmonella enterica strain 2017K-0021 plasmid pMCR-1-CTSe, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

117. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP021735 (Escherichia coli strain AR_0114 plasmid unitig_4, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

118. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP026942 (Escherichia coli strain CFS3313 plasmid pCFS3313-3, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

119. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP037906 (Escherichia coli strain LHM10-1 plasmid pLHM10-1-MCR-1, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

120. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NC_021079 (Klebsiella pneumoniae strain Kp002 plasmid pJEG012, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

121. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_LT985276 (Escherichia coli strain 707 plasmid RCS67_p, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

122. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_MK477604 (Salmonella enterica strain SH15G1397 plasmid pSH15G1397, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

123. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_MK477610 (Salmonella enterica strain SH15G2167 plasmid pSH15G2167, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

124. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_MK477615 (Salmonella enterica strain SH16G1509 plasmid pSH16G1509, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

125. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_MH938808 (Escherichia coli strain LHM10-1 plasmid pLHM10-1-mcr-1, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

126. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to KU761327 (Klebsiella pneumoniae strain SZ04 plasmid pmcr1_IncX4, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

127. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_MF978387 (Escherichia coli strain GDT6F49 plasmid pHNGDF49, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

128. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_MF175184 (Escherichia coli strain PF91 plasmid pPF91, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

129. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_MG257881 (Escherichia coli strain P744T plasmid pP744T-MCR1, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

130. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_MF774182 (Escherichia coli strain SHP10 plasmid pHNSHP10, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

131. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_MG210937 (Escherichia coli strain GZ49260 plasmid pGZ49260, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

132. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_MF175190 (Escherichia coli strain ColR598 plasmid pColR598_1, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

133. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_MF175191 (Escherichia coli strain CDF8 plasmid pCDF8, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

134. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_MF381176 (Escherichia coli strain V163 plasmid pV163M, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

135. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_MF774188 (Escherichia coli strain SHP49 plasmid pHNSHP49, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

136. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_MF381175 (Escherichia coli strain V163 plasmid pV163M deltamcr-1, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

137. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_MF774184 (Escherichia coli strain SHP23 plasmid pHNSHP23, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

138. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_MH061196 (Klebsiella pneumoniae strain AHM7C25I plasmid pHNAH25I-MCR, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

139. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_MG210939 (Escherichia coli strain GZ49269 plasmid pGZ49269, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

140. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_KY865319 (Escherichia coli strain SY3018 plasmid pEC14cfr, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

141. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_MF175185 (Escherichia coli strain PF52 plasmid pPF52, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

142. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_MF175186 (Escherichia coli strain PF11 plasmid pPF11, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

143. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_KX894453 (Escherichia coli strain IHIT31346 plasmid pMCR-1-IHIT35346, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

144. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_KX570748 (Escherichia coli strain ECMY3 plasmid pECMCR-1101, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

145. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_KY012276 (Escherichia coli strain 18HAE25 plasmid pEc_18HAE25, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

146. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_KY463454 (Escherichia coli strain WCHEC050618 plasmid pMCR_WCHEC1618, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

147. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_KY565556 (Escherichia coli strain Mcp0271 plasmid pMcp0271, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

148. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_KY770023 (Escherichia coli strain ICBEC2AM plasmid pICBEC2AM, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

149. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_KY463451 (Escherichia coli strain WCHEC050606 plasmid pMCR_WCHEC1606, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

150. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_KY770024 (Escherichia coli strain ICBEC3AM plasmid pICBEC3AM, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

151. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_KY652381 (Escherichia coli strain WCHEC050622 plasmid pIncX4_WCHEC1622, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

152. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_KY770025 (Escherichia coli strain ICBEC13AM plasmid pICBEC13AM, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

153. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_LT838201 (Escherichia coli isolate WI2 isolate plasmid pWI2-mcr, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

154. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP028167 (Escherichia coli strain CFSAN064036 plasmid pGMI17-004_2, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

155. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_KU743383 (Escherichia coli strain ENV-187 plasmid pESTMCR, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

156. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_KY120364 (Salmonella enterica subsp. enterica serovar Typhimurium strain NG14043 plasmid pNG14043, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

157. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_KX084392 (Escherichia coli strain B65 plasmid pECJS-B65-33, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

158. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_KX254343 (Escherichia coli strain GD-8 plasmid pECGD-8-33, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

159. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP024919 (Klebsiella pneumoniae strain NH54 plasmid pKPNH54.3, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

160. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to LC227558 (Escherichia coli plasmid pKT2378 DNA, complete sequence, strain: KT2378) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

161. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP011290 (Salmonella enterica subsp. diarizonae strain 11-01853 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

162. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP038181 (Escherichia coli strain 2 HS-C plasmid p2HS-C-1, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

163. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP026728 (Escherichia coli strain 266917_2 plasmid p266917_2_05, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

164. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to MK574665 (Escherichia coli strain DIB-1 plasmid pDIB-1, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

165. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to MN648330 (Klebsiella pneumoniae strain T38 plasmid pT38-MCR-1, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

166. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP042647 (Escherichia coli strain NCYU-21-79 plasmid pNCYU-21-79-2_MCR1, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

167. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to MN232194 (Escherichia coli plasmid pGD27-69, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

168. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP035754 (Escherichia coli E110019 plasmid pE110019_33, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

169. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP044138 (Escherichia coli O157 strain AR-0430 plasmid pAR-0430-2, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

170. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP042607 (Escherichia coli strain NCYU-29-19 plasmid pNCYU-29-19-1_MCR1, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

171. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP033357 (Salmonella enterica subsp. enterica strain EQAS2016S1 plasmid pEQAS2016S1-2, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

172. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP031616 (Klebsiella pneumoniae strain ZYST1 plasmid pZYST1C3, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

173. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP024861 (Escherichia coli strain AR_0014 plasmid unitig_2_pilon, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

174. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP034833 (Salmonella sp. SSDFZ69 plasmid pTB602, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

175. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP024149 (Escherichia coli strain 14EC033 plasmid p14EC033b, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

176. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_LR025103 (Escherichia coli isolate EC-1639 plasmid 4, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

177. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP040725 (Klebsiella pneumoniae strain KpvST147B_SE1_1_NDM plasmid pKpvST147B_3, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

178. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP018950 (Escherichia coli strain Ecol_276 plasmid pEC276_3, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

179. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NC_019128 (Salmonella enterica subsp. enterica serovar Heidelberg plasmid pSH696_34, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

180. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NC_019129 (Salmonella enterica subsp. enterica serovar Heidelberg plasmid pSH146_32, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

181. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NC_019130 (Salmonella enterica subsp. enterica serovar Heidelberg plasmid pSH163_34, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

182. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP022346 (Bacillus thuringiensis strain c25 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
taatcttgattctgacaaaatacagcaaag	Protospacer
  ***.**************** **.*  .

183. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to CP042970 (Escherichia coli strain CFSAN061769 plasmid pCFSAN061769_01, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

184. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP024462 (Klebsiella pneumoniae strain QS17-0161 plasmid pMR0617mcr1, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

185. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_LS992170 (Escherichia coli isolate Escherichia coli str. TO60 plasmid 3, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

186. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_LS992170 (Escherichia coli isolate Escherichia coli str. TO60 plasmid 3, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

187. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to MK940857 (Escherichia coli strain 11 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

188. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to MK940858 (Escherichia coli strain 91 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

189. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to MG557854 (Escherichia coli plasmid PN42, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

190. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to AP023229 (Escherichia coli YJ3 plasmid pYJ3-b DNA, complete genome) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

191. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP021418 (Escherichia coli strain ICBEC171S plasmid pICBEC171Smcr, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

192. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP047612 (Escherichia coli strain NMBU_ W06E18 plasmid pNMBU_W06E18_Str1_3, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

193. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP024132 (Escherichia coli strain 14EC007 plasmid p14EC007a, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

194. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP033349 (Salmonella enterica subsp. enterica strain CFSA231 plasmid pCFSA231, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

195. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP021419 (Escherichia coli strain ICBEC12-3F plasmid pICBEC12-3mcr, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

196. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP033849 (Escherichia coli strain FDAARGOS_497 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

197. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP019908 (Escherichia coli strain MDR_56 plasmid pMCR1-NY, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

198. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NC_010657 (Shigella boydii CDC 3083-94 plasmid pBS512_33, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

199. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP016550 (Escherichia coli strain O177:H21 plasmid unnamed4, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

200. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP020376 (Escherichia coli strain ICBEC79H plasmid pICBEC79Hmcr, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

201. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to CP052800 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S990 plasmid pN17S0990-2, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

202. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_MH143576 (Salmonella enterica subsp. enterica serovar California strain SL01 plasmid pMCR-1, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

203. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_MH043624 (Escherichia coli strain GDZJ003 plasmid pGDZJ003-1-MCR-1, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

204. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_MF449287 (Escherichia coli strain T71115 plasmid pIBMC_mcr1, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

205. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_MF136779 (Escherichia coli strain HKSHmcr1_P2_EC plasmid pHKSHmcr1_P2_p2, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

206. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_MG825367 (Escherichia coli strain 787 plasmid p787-MCR, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

207. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_MH522422 (Salmonella enterica subsp. enterica serovar Typhimurium strain SH16G2543 plasmid pSH16G2543, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

208. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_MH522417 (Salmonella enterica subsp. enterica serovar Typhimurium strain SH15G2169 plasmid pSH15G2169, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

209. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_KY689634 (Escherichia coli strain 31349 plasmid p31349, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

210. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_KY582848 (Escherichia coli strain WCHEC050604 plasmid pMCR_WCHEC1604-IncX4, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

211. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_KY964067 (Escherichia coli strain LV23529 plasmid pLV23529-MCR-1.9, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

212. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_MF093645 (Escherichia coli strain 288328 plasmid pMCR-1.2-IT-Ec, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

213. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_MG747473 (Escherichia coli strain 13-43 plasmid pE13-43-mcr-1, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

214. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP023829 (Escherichia coli strain 4/4 plasmid p4_4.3, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

215. spacer 16.1|2584930|30|NZ_CP011456|CRISPRCasFinder matches to CP052790 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0552 plasmid pN19S0552-2, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcctgattctgacaaaataaagtatca	CRISPR spacer
aaagaaggattaggacaaaataaagtatca	Protospacer
. *    ****  *****************

216. spacer 20.1|2752824|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP039294 (Pseudomonas aeruginosa strain PABL048 plasmid pPABL048, complete sequence) position: , mismatch: 8, identity: 0.733

acgagaaaatgaaggcagagctttctagac	CRISPR spacer
tggagggaatgaaggcagagctttcctccc	Protospacer
  ***..******************.   *

217. spacer 26.1|3030770|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP017076 (Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence) position: , mismatch: 8, identity: 0.733

cgatgccctgagcctgtcgaagggtcgaag	CRISPR spacer
gctcaccctgagcttgtcgaagggtctcag	Protospacer
   ..********.************  **

218. spacer 26.1|3030770|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP016453 (Sphingobium sp. RAC03 plasmid pBSY17_1, complete sequence) position: , mismatch: 8, identity: 0.733

cgatgccctgagcctgtcgaagggtcgaag	CRISPR spacer
gttcgccctgagcttgtcgaagggtcttac	Protospacer
   .*********.************  *

219. spacer 26.1|3030770|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP016453 (Sphingobium sp. RAC03 plasmid pBSY17_1, complete sequence) position: , mismatch: 8, identity: 0.733

cgatgccctgagcctgtcgaagggtcgaag	CRISPR spacer
gttcgccctgagcttgtcgaagggccgcac	Protospacer
   .*********.**********.** *

220. spacer 26.1|3030770|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP024183 (Moraxella osloensis strain KSH plasmid p3, complete sequence) position: , mismatch: 8, identity: 0.733

cgatgccctgagcctgtcgaagggtcgaag	CRISPR spacer
gttcgccctgagcctgtcgaacggtgaagg	Protospacer
   .***************** *** .*.*

221. spacer 26.1|3030770|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP024447 (Moraxella osloensis strain NP7 plasmid pNP7-4, complete sequence) position: , mismatch: 8, identity: 0.733

cgatgccctgagcctgtcgaagggtcgaag	CRISPR spacer
gttcgccctgagcctgtcaaagggtgaagg	Protospacer
   .**************.****** .*.*

222. spacer 26.1|3030770|30|NZ_CP011456|CRISPRCasFinder matches to NZ_AP017383 (Moraxella osloensis strain KMC41 plasmid pMOSL2, complete sequence) position: , mismatch: 8, identity: 0.733

cgatgccctgagcctgtcgaagggtcgaag	CRISPR spacer
gttcgccctgagcctgtcgaacggtgaagg	Protospacer
   .***************** *** .*.*

223. spacer 26.1|3030770|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP024186 (Moraxella osloensis strain TT16 plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.733

cgatgccctgagcctgtcgaagggtcgaag	CRISPR spacer
gttcgccctgagcctgtcgaacggtgaagg	Protospacer
   .***************** *** .*.*

224. spacer 26.1|3030770|30|NZ_CP011456|CRISPRCasFinder matches to NZ_AP014706 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_2p, complete sequence) position: , mismatch: 8, identity: 0.733

cgatgccctgagcctgtcgaagggtcgaag	CRISPR spacer
cctcatcctgagcctgtcgaaggatcgtcg	Protospacer
*  ...*****************.***  *

225. spacer 26.1|3030770|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP024177 (Moraxella osloensis strain YHS plasmid pYHS1, complete sequence) position: , mismatch: 8, identity: 0.733

cgatgccctgagcctgtcgaagggtcgaag	CRISPR spacer
gttcgccctgagcctgtcgaacggtgaagg	Protospacer
   .***************** *** .*.*

226. spacer 30.1|3467111|34|NZ_CP011456|PILER-CR,CRISPRCasFinder matches to MG945424 (UNVERIFIED: Microviridae sp. isolate 4374-1801, complete genome) position: , mismatch: 8, identity: 0.765

gatccagaaccaacagaagcagt----agaaggccacc	CRISPR spacer
gaaccagaaccaccagaagcagtatcgacaagac----	Protospacer
** ********* **********    * ***.*

227. spacer 31.5|3594564|32|NZ_CP011456|PILER-CR,CRISPRCasFinder,CRT matches to AP013427 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G16, isolate: uvMED-CGR-C57A-MedDCM-OCT-S25-C28) position: , mismatch: 8, identity: 0.75

ataaaaaaagatggtatttattaccggaaaaa	CRISPR spacer
ataaaaacagatggcatttattacacttagta	Protospacer
******* ******.*********    *. *

228. spacer 31.5|3594564|32|NZ_CP011456|PILER-CR,CRISPRCasFinder,CRT matches to AP013428 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G16, isolate: uvMED-CGR-C57A-MedDCM-OCT-S39-C32) position: , mismatch: 8, identity: 0.75

ataaaaaaagatggtatttattaccggaaaaa	CRISPR spacer
ataaaaacagatggcatttattacacttagta	Protospacer
******* ******.*********    *. *

229. spacer 48.5|5686390|31|NZ_CP011456|CRT matches to NZ_CP033067 (Pseudoalteromonas agarivorans strain Hao 2018 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.742

tgcaagcagttcgtttaaaattaggggttgt	CRISPR spacer
tgcaagcagttcgtttaaatttaaacgcaaa	Protospacer
******************* ***.. *. .

230. spacer 5.3|886241|34|NZ_CP011456|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010578 (Bacillus thuringiensis serovar morrisoni strain BGSC 4AA1 plasmid pBMB232, complete sequence) position: , mismatch: 9, identity: 0.735

ctatttaggcgttagccttgtacccttcaattag	CRISPR spacer
gcatcgaggcgttaaccatgtacccttcaaatga	Protospacer
 .**. ********.** ************ *..

231. spacer 26.1|3030770|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP017076 (Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence) position: , mismatch: 9, identity: 0.7

cgatgccctgagcctgtcgaagggtcgaag	CRISPR spacer
gctcaccctgagcctgtcgaagggtctgct	Protospacer
   ..********************* .

232. spacer 26.1|3030770|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP054841 (Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

cgatgccctgagcctgtcgaagggtcgaag	CRISPR spacer
gctcgccctgagcctgtcgaagggtgatca	Protospacer
   .********************* .  .

233. spacer 26.1|3030770|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP054841 (Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

cgatgccctgagcctgtcgaagggtcgaag	CRISPR spacer
gttcgccctgagcccgtcgaagggtgaacc	Protospacer
   .**********.********** .*

234. spacer 26.1|3030770|30|NZ_CP011456|CRISPRCasFinder matches to NC_015597 (Sinorhizobium meliloti AK83 plasmid pSINME01, complete sequence) position: , mismatch: 9, identity: 0.7

cgatgccctgagcctgtcgaagggtcgaag	CRISPR spacer
ttcgcatctgagcccgtcgaagggtcgaat	Protospacer
.     .*******.**************

235. spacer 26.1|3030770|30|NZ_CP011456|CRISPRCasFinder matches to NZ_AP018666 (Sphingobium amiense strain DSM 16289 plasmid pSAMIE_3, complete sequence) position: , mismatch: 9, identity: 0.7

cgatgccctgagcctgtcgaagggtcgaag	CRISPR spacer
tcccggcctgagcctgtcgaagggccggga	Protospacer
.  .* ******************.**...

236. spacer 26.1|3030770|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP018821 (Sphingomonas koreensis strain ABOJV plasmid tig00000001, complete sequence) position: , mismatch: 9, identity: 0.7

cgatgccctgagcctgtcgaagggtcgaag	CRISPR spacer
tcccggcctgagcctgtcgaagggccggga	Protospacer
.  .* ******************.**...

237. spacer 26.1|3030770|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP023451 (Rhizorhabdus dicambivorans strain Ndbn-20 plasmid p2, complete sequence) position: , mismatch: 9, identity: 0.7

cgatgccctgagcctgtcgaagggtcgaag	CRISPR spacer
tcccggcctgagcctgtcgaagggccggga	Protospacer
.  .* ******************.**...

238. spacer 26.1|3030770|30|NZ_CP011456|CRISPRCasFinder matches to CP021185 (Sphingomonas wittichii DC-6 plasmid pDC04, complete sequence) position: , mismatch: 9, identity: 0.7

cgatgccctgagcctgtcgaagggtcgaag	CRISPR spacer
tcccggcctgagcctgtcgaagggccggga	Protospacer
.  .* ******************.**...

239. spacer 26.1|3030770|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP051207 (Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence) position: , mismatch: 9, identity: 0.7

cgatgccctgagcctgtcgaagggtcgaag	CRISPR spacer
tctgacagtgagcttgtcgaagggtcgaac	Protospacer
.   .*  *****.***************

240. spacer 35.1|3991818|35|NZ_CP011456|CRISPRCasFinder matches to NC_019777 (Cyanobacterium aponinum PCC 10605 plasmid pCYAN10605.01, complete sequence) position: , mismatch: 9, identity: 0.743

ttttatcaatttcaggattaacccaacaatcatca	CRISPR spacer
ttttatgaatttcatgattaacccattcttctttg	Protospacer
****** ******* ********** .  ** *..

241. spacer 43.1|5246024|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP053953 (Bacillus cereus strain FDAARGOS_798 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.7

taaaatattagtacaccacaaatcaaatca	CRISPR spacer
cctcgtaatagtacaccacaaatcaaactg	Protospacer
.   .** *******************...

242. spacer 43.1|5246024|30|NZ_CP011456|CRISPRCasFinder matches to NZ_CP053950 (Bacillus cereus strain FDAARGOS_799 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.7

taaaatattagtacaccacaaatcaaatca	CRISPR spacer
cctcgtaatagtacaccacaaatcaaactg	Protospacer
.   .** *******************...

243. spacer 30.1|3467111|34|NZ_CP011456|PILER-CR,CRISPRCasFinder matches to MT661596 (Proteus phage 10, complete genome) position: , mismatch: 10, identity: 0.706

gatccagaaccaacagaagcagtagaaggccacc	CRISPR spacer
gtaacagaagcaacagaagcagttgaagaagtct	Protospacer
*   ***** ************* ****.   *.

244. spacer 30.2|3467182|36|NZ_CP011456|PILER-CR,CRISPRCasFinder matches to NZ_CP030090 (Lactobacillus reuteri strain YSJL-12 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.722

taagattataatcatctaaatcactattatttaaaa	CRISPR spacer
cgtgcgcgttatcatccaaatcattattatttaaaa	Protospacer
.. *  ..* ******.******.************

245. spacer 31.6|3594633|34|NZ_CP011456|PILER-CR,CRISPRCasFinder,CRT matches to NC_028887 (Bacillus phage AvesoBmore, complete genome) position: , mismatch: 10, identity: 0.706

atattaggattagtaccaccgcttattttataca	CRISPR spacer
attcggtttttagtaacaccgtttattttatacc	Protospacer
** . .   ****** *****.***********

246. spacer 31.6|3594633|34|NZ_CP011456|PILER-CR,CRISPRCasFinder,CRT matches to NC_022088 (Bacillus phage Troll, complete genome) position: , mismatch: 10, identity: 0.706

atattaggattagtaccaccgcttattttataca	CRISPR spacer
attcggtttttagtaacaccgtttattttatacc	Protospacer
** . .   ****** *****.***********

247. spacer 30.1|3467111|34|NZ_CP011456|PILER-CR,CRISPRCasFinder matches to KF301602 (Caulobacter phage Cr30, complete genome) position: , mismatch: 11, identity: 0.676

gatccagaaccaacagaagcagtagaaggccacc	CRISPR spacer
ggagcagaaacaacagaaggagtagaagattctt	Protospacer
*.  ***** ********* ********... ..

248. spacer 38.12|4548629|35|NZ_CP011456|CRISPRCasFinder,CRT matches to AP014311 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S30-C44, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 11, identity: 0.686

ttccaagatttgtaagcttctaaaactgtaattaa	CRISPR spacer
gcatattgtttgtaagcttctacaacagtaatttt	Protospacer
 . .*  .************** *** ******

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

866278 : 941986

Bacteriophage(16.67%)

protease,transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_053541175.1\|866278_867058_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_053537983.1\|867102_867486_-	hypothetical protein	NA	NA	NA	NA
WP_081424130.1\|867562_867760_-	hypothetical protein	NA	NA	NA	NA
WP_053537984.1\|867803_868709_+	Hsp33 family molecular chaperone HslO	NA	NA	NA	NA
WP_053537985.1\|868860_870936_+	hypothetical protein	NA	NA	NA	NA
WP_053537986.1\|871117_871933_-	pyrroline-5-carboxylate reductase	A0A1X9I6T5	Streptococcus_phage	4.7e-38	40.3
WP_053537987.1\|871985_872588_-	cell division protein SepF	NA	NA	NA	NA
WP_053537988.1\|872954_873644_-	YggS family pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_027402694.1\|873640_873919_-	PipX family protein	NA	NA	NA	NA
WP_053537989.1\|874387_877285_+	type III-B CRISPR-associated protein Cas10/Cmr2	NA	NA	NA	NA
WP_081424131.1\|877543_878674_+	CRISPR-associated protein	NA	NA	NA	NA
WP_053537990.1\|878686_879127_+	hypothetical protein	NA	NA	NA	NA
WP_081424132.1\|879086_880997_+	hypothetical protein	NA	NA	NA	NA
WP_053537992.1\|880981_882691_+	hypothetical protein	NA	NA	NA	NA
WP_053537993.1\|882939_885015_+	WYL domain-containing protein	U5J9W1	Bacillus_phage	1.7e-12	37.4
WP_053537994.1\|885133_885706_+\|transposase	transposase	NA	NA	NA	NA
WP_039203187.1\|887264_887519_+	hypothetical protein	NA	NA	NA	NA
WP_053537995.1\|887558_888551_+	CRISPR-associated endonuclease Cas1	NA	NA	NA	NA
WP_039203185.1\|888550_888829_+	CRISPR-associated endonuclease Cas2	NA	NA	NA	NA
WP_053537996.1\|889293_891210_-	hypothetical protein	NA	NA	NA	NA
WP_027402681.1\|891293_891599_-	acyl carrier protein	NA	NA	NA	NA
WP_053537997.1\|891599_892928_-	alcohol acetyltransferase	NA	NA	NA	NA
WP_053537998.1\|893359_895003_-	PfaD family polyunsaturated fatty acid/polyketide biosynthesis protein	NA	NA	NA	NA
WP_053537999.1\|895241_897893_-	type I polyketide synthase	NA	NA	NA	NA
WP_053538000.1\|898153_905062_-	type I polyketide synthase	D0R7J2	Paenibacillus_phage	3.1e-18	29.9
WP_027402676.1\|906514_906844_+	hypothetical protein	NA	NA	NA	NA
WP_053538001.1\|907093_908296_+	ABC exporter membrane fusion protein	NA	NA	NA	NA
WP_053538002.1\|908388_909564_+	FtsX-like permease family protein	NA	NA	NA	NA
WP_053538003.1\|909832_910531_+	DevA family ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	6.7e-78	70.8
WP_053541176.1\|910824_911799_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_053538004.1\|912848_914834_+	AarF/ABC1/UbiB kinase family protein	E5ES62	Bathycoccus_sp._RCC1105_virus	1.5e-45	28.4
WP_053538005.1\|915191_915479_-	hypothetical protein	NA	NA	NA	NA
WP_053538006.1\|915518_915932_-	chorismate mutase	NA	NA	NA	NA
WP_053538007.1\|916054_916876_-	signal peptide peptidase SppA	Q8W6U6	Burkholderia_virus	1.4e-10	30.1
WP_071992797.1\|917752_918049_-	hypothetical protein	NA	NA	NA	NA
WP_039205142.1\|918382_919168_+	MlaE family lipid ABC transporter permease subunit	NA	NA	NA	NA
WP_053538008.1\|919722_920127_-\|transposase	IS200/IS605 family transposase	A0A1L2BWN1	Bacteriophage	3.1e-35	55.7
WP_053538009.1\|920203_921709_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A1I9KF42	Aeromonas_phage	4.4e-26	29.3
WP_053538010.1\|921825_923037_+	DUF3086 domain-containing protein	NA	NA	NA	NA
WP_053538011.1\|923172_923853_+	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA
WP_053538012.1\|924003_924636_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_053538013.1\|924729_925896_+	ferrochelatase	NA	NA	NA	NA
WP_081424133.1\|926639_927953_+\|transposase	IS1634 family transposase	NA	NA	NA	NA
WP_053541177.1\|928364_929660_-	adenylosuccinate lyase	A0A1B3B081	Gordonia_phage	3.7e-21	33.5
WP_027402661.1\|929727_930384_-	hypothetical protein	NA	NA	NA	NA
WP_027402660.1\|930607_930802_-	DUF3252 domain-containing protein	M4QFU1	Prochlorococcus_phage	8.0e-05	43.4
WP_053538014.1\|931131_932445_-	rod shape-determining protein RodA	NA	NA	NA	NA
WP_053538015.1\|932598_933669_-	Mrp/NBP35 family ATP-binding protein	NA	NA	NA	NA
WP_053538016.1\|934682_936131_+	alkaline invertase	NA	NA	NA	NA
WP_053538017.1\|936478_937297_-	DUF2887 domain-containing protein	NA	NA	NA	NA
WP_053538018.1\|937842_939723_-	SUMF1/EgtB/PvdO family nonheme iron enzyme	A0A075BSL8	Microcystis_phage	1.4e-48	42.1
WP_053538019.1\|939730_940126_-	hypothetical protein	NA	NA	NA	NA
WP_053538020.1\|940744_941986_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A1L2BWW3	Bacteriophage	5.4e-171	68.8

DBSCAN-SWA_2

2532129 : 2612220

uncultured_Mediterranean_phage(20.0%)

tRNA,protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_081424202.1\|2532129_2533311_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A0R8V9X2	Thermobifida_phage	1.5e-66	40.4
WP_027400788.1\|2533452_2533809_+	NAD(P)H-quinone oxidoreductase subunit M	NA	NA	NA	NA
WP_053539048.1\|2534023_2536192_+	SpoIIE family protein phosphatase	NA	NA	NA	NA
WP_053541256.1\|2536398_2538021_+	CHAT domain-containing protein	NA	NA	NA	NA
WP_053539049.1\|2538114_2538750_+	hypothetical protein	NA	NA	NA	NA
WP_053539050.1\|2538962_2540312_-\|protease	PrsW family intramembrane metalloprotease	NA	NA	NA	NA
WP_053539051.1\|2540609_2544236_-	hybrid sensor histidine kinase/response regulator	Q56AR1	Bacillus_thuringiensis_phage	1.2e-13	31.3
WP_053539052.1\|2544735_2548602_-	GAF domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	4.5e-14	29.1
WP_053539053.1\|2548776_2549250_-	chemotaxis protein CheW	NA	NA	NA	NA
WP_053539054.1\|2549385_2549748_-	response regulator	A0A220YL79	Alteromonas_virus	7.9e-14	35.6
WP_053539055.1\|2549952_2551161_-	response regulator	NA	NA	NA	NA
WP_039204873.1\|2551764_2552685_-	N-acetylmuramic acid 6-phosphate etherase	NA	NA	NA	NA
WP_027400778.1\|2552848_2553268_-	DUF3110 domain-containing protein	A0A1B1IU52	uncultured_Mediterranean_phage	5.9e-05	35.7
WP_053539056.1\|2553681_2559150_+	translocation/assembly module TamB	NA	NA	NA	NA
WP_053539057.1\|2559378_2561214_-	APC family permease	NA	NA	NA	NA
WP_053539058.1\|2561653_2562325_+	DnaJ domain-containing protein	NA	NA	NA	NA
WP_081424358.1\|2562296_2562506_-	hypothetical protein	NA	NA	NA	NA
WP_053541257.1\|2563092_2563917_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_053539059.1\|2563935_2564868_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_081424203.1\|2566107_2566227_-\|transposase	transposase	NA	NA	NA	NA
WP_053539060.1\|2567640_2568522_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_027400770.1\|2568855_2569653_-	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	1.0e-45	41.9
WP_081424204.1\|2569677_2569965_-	hypothetical protein	NA	NA	NA	NA
WP_053539061.1\|2570107_2571100_+\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2K9L3A8	Tupanvirus	2.7e-32	38.3
WP_053539062.1\|2571330_2571894_-	Uma2 family endonuclease	NA	NA	NA	NA
WP_053539063.1\|2572580_2573690_+	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	2.4e-61	43.2
WP_053539064.1\|2573780_2574968_+	FtsW/RodA/SpoVE family cell cycle protein	NA	NA	NA	NA
WP_053541258.1\|2575442_2575673_-	type II toxin-antitoxin system HicB family antitoxin	NA	NA	NA	NA
WP_027400758.1\|2576776_2577196_+	fatty-acid synthase	NA	NA	NA	NA
WP_053539065.1\|2577183_2577519_+	XisI protein	NA	NA	NA	NA
WP_015080227.1\|2577581_2577890_-	hypothetical protein	NA	NA	NA	NA
WP_053539066.1\|2577938_2578145_-	hypothetical protein	NA	NA	NA	NA
WP_053539067.1\|2578667_2579054_+	DUF4879 domain-containing protein	NA	NA	NA	NA
WP_053539068.1\|2579156_2579597_+	hypothetical protein	NA	NA	NA	NA
WP_053539069.1\|2579730_2581254_+	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_053539070.1\|2581511_2582693_+	FtsX-like permease family protein	NA	NA	NA	NA
WP_053539071.1\|2582760_2584260_+	TolC family protein	NA	NA	NA	NA
WP_027400762.1\|2584495_2584726_-	hypothetical protein	NA	NA	NA	NA
WP_015080223.1\|2585178_2586468_+	phosphopyruvate hydratase	W6LP63	Streptococcus_phage	1.3e-135	57.6
WP_053539072.1\|2586548_2587607_-	N-acetyl-gamma-glutamyl-phosphate reductase	NA	NA	NA	NA
WP_015080221.1\|2587817_2588039_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_053539073.1\|2588039_2588870_+	ScaI family restriction endonuclease	NA	NA	NA	NA
WP_053539074.1\|2588891_2589743_-	site-specific DNA-methyltransferase	A0A0M4JJT6	Mollivirus	1.6e-97	59.2
WP_053539075.1\|2590042_2591716_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase RibB/GTP cyclohydrolase II RibA	A0A2H4PQS2	Staphylococcus_phage	3.6e-101	48.2
WP_052149937.1\|2592050_2593394_+	ATP-binding protein	V9QJ85	Oenococcus_phage	6.1e-11	34.0
WP_053539076.1\|2593368_2594004_+	RloB domain-containing protein	NA	NA	NA	NA
WP_015080216.1\|2594139_2595018_-\|transposase	Rpn family recombination-promoting nuclease/putative transposase	NA	NA	NA	NA
WP_053539077.1\|2595123_2595981_-	N-acetylmuramoyl-L-alanine amidase	NA	NA	NA	NA
WP_053539079.1\|2596851_2597061_+	DUF2997 domain-containing protein	NA	NA	NA	NA
WP_027400746.1\|2597100_2597487_+	DUF1257 domain-containing protein	A0A1B1IU37	uncultured_Mediterranean_phage	7.1e-13	38.9
WP_053539080.1\|2597486_2597942_+	ferredoxin	NA	NA	NA	NA
WP_053539081.1\|2598565_2599612_+	oxygen-dependent coproporphyrinogen oxidase	NA	NA	NA	NA
WP_053539082.1\|2599885_2600257_+	STAS domain-containing protein	NA	NA	NA	NA
WP_027400742.1\|2600368_2601040_+	photosystem II biogenesis protein Psp29	NA	NA	NA	NA
WP_081424205.1\|2601036_2601240_-	hypothetical protein	NA	NA	NA	NA
WP_081424359.1\|2602716_2606271_+	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	1.2e-21	64.9
WP_053539084.1\|2606485_2607976_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	4.4e-50	30.7
WP_053537527.1\|2608284_2609304_+\|transposase	transposase	NA	NA	NA	NA
WP_053537530.1\|2611020_2612220_+\|transposase	IS4 family transposase	NA	NA	NA	NA

DBSCAN-SWA_3

3329436 : 3398346

Ralstonia_phage(16.67%)

protease,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_053539530.1\|3329436_3330918_-\|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	NA	NA	NA	NA
WP_053539531.1\|3331324_3331873_-	fasciclin domain-containing protein	NA	NA	NA	NA
WP_053539532.1\|3332061_3334107_-	NAD-dependent DNA ligase LigA	A0A0K2QQN8	Ralstonia_phage	4.6e-119	37.4
WP_039205034.1\|3334307_3335285_+	glycerophosphodiester phosphodiesterase	NA	NA	NA	NA
WP_053539533.1\|3336540_3338886_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_053539534.1\|3339123_3339798_-	alpha-ketoglutarate-dependent dioxygenase AlkB	A0A285Q2Y8	Cedratvirus	1.3e-22	31.6
WP_053539535.1\|3340551_3342576_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_027401013.1\|3342685_3343009_+\|protease	ATP-dependent Clp protease adapter ClpS	NA	NA	NA	NA
WP_027401012.1\|3343011_3343308_+	hypothetical protein	NA	NA	NA	NA
WP_053537527.1\|3343514_3344534_-\|transposase	transposase	NA	NA	NA	NA
WP_053539536.1\|3344572_3344872_-	hypothetical protein	NA	NA	NA	NA
WP_027401010.1\|3345353_3345734_+	hypothetical protein	NA	NA	NA	NA
WP_081424228.1\|3345753_3345939_+	hypothetical protein	NA	NA	NA	NA
WP_053539537.1\|3345945_3348138_-	hypothetical protein	NA	NA	NA	NA
WP_053539538.1\|3348196_3349510_+	proton extrusion protein PcxA	NA	NA	NA	NA
WP_081424372.1\|3359620_3361390_+	hypothetical protein	S5W9C6	Leptospira_phage	1.7e-08	32.1
WP_053539540.1\|3361393_3361792_+	hypothetical protein	NA	NA	NA	NA
WP_053539541.1\|3362165_3362522_-	DUF5615 family PIN-like protein	NA	NA	NA	NA
WP_053539542.1\|3362521_3362758_-	DUF433 domain-containing protein	NA	NA	NA	NA
WP_053539543.1\|3363232_3363451_+	type II toxin-antitoxin system prevent-host-death family antitoxin	NA	NA	NA	NA
WP_053539544.1\|3363447_3363834_+	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA
WP_053539545.1\|3364089_3364434_+	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA
WP_053539546.1\|3364859_3365231_-	endonuclease domain-containing protein	NA	NA	NA	NA
WP_053539547.1\|3365447_3365660_+	hypothetical protein	NA	NA	NA	NA
WP_053539548.1\|3365846_3366062_+	hypothetical protein	NA	NA	NA	NA
WP_027400629.1\|3366058_3366340_+	type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family	NA	NA	NA	NA
WP_053539550.1\|3366342_3366651_+	hypothetical protein	NA	NA	NA	NA
WP_028091145.1\|3366740_3366944_+	type II toxin-antitoxin system HicB family antitoxin	NA	NA	NA	NA
WP_081424229.1\|3366940_3367102_+	type II toxin-antitoxin system HicA family toxin	NA	NA	NA	NA
WP_053539551.1\|3367650_3368208_+	Uma2 family endonuclease	NA	NA	NA	NA
WP_039201895.1\|3368425_3368680_+	type II toxin-antitoxin system prevent-host-death family antitoxin	NA	NA	NA	NA
WP_053539552.1\|3368672_3368927_+	Txe/YoeB family addiction module toxin	NA	NA	NA	NA
WP_081424230.1\|3368893_3369337_-	polysaccharide deacetylase family protein	NA	NA	NA	NA
WP_053539553.1\|3369438_3370260_+	Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrB	NA	NA	NA	NA
WP_053539554.1\|3370290_3371664_+	DUF2330 domain-containing protein	NA	NA	NA	NA
WP_053539555.1\|3372727_3373858_-	CO2 hydration protein	NA	NA	NA	NA
WP_053539556.1\|3373935_3375432_-	NADH-quinone oxidoreductase subunit M	NA	NA	NA	NA
WP_053539557.1\|3375459_3375873_+	hypothetical protein	NA	NA	NA	NA
WP_053539558.1\|3375861_3377718_-	NAD(P)H-quinone oxidoreductase subunit F	NA	NA	NA	NA
WP_027401081.1\|3378374_3378683_+	carbon dioxide-concentrating mechanism protein CcmK	NA	NA	NA	NA
WP_015080435.1\|3378776_3379121_+	carbon dioxide-concentrating mechanism protein CcmK	NA	NA	NA	NA
WP_015080436.1\|3379127_3379433_+	EutN/CcmL family microcompartment protein	NA	NA	NA	NA
WP_081424231.1\|3379371_3379623_-	hypothetical protein	NA	NA	NA	NA
WP_053539559.1\|3379663_3381319_+	cytochrome C biogenesis protein CcmM	NA	NA	NA	NA
WP_053539560.1\|3381482_3382292_+	transferase	NA	NA	NA	NA
WP_053539561.1\|3382392_3383181_+	BMC domain-containing protein	NA	NA	NA	NA
WP_053539562.1\|3383267_3387479_-	DEAD/DEAH box helicase	A0A160DHD3	Gordonia_phage	1.5e-39	27.4
WP_081424373.1\|3387873_3388149_-	hypothetical protein	NA	NA	NA	NA
WP_053539564.1\|3388285_3389227_+	LysR family transcriptional regulator	A0A2P0ZL89	Lactobacillus_phage	3.8e-15	23.6
WP_053539565.1\|3389321_3389750_+	hypothetical protein	NA	NA	NA	NA
WP_053539566.1\|3389970_3390813_+	hypothetical protein	NA	NA	NA	NA
WP_053541295.1\|3390794_3392090_+	O-antigen ligase family protein	NA	NA	NA	NA
WP_081424374.1\|3392295_3392961_+	hypothetical protein	NA	NA	NA	NA
WP_053539567.1\|3392964_3394308_-	protein kinase	D2X3B9	Enterobacteria_phage	3.5e-06	22.6
WP_053539568.1\|3394545_3394806_+	hypothetical protein	NA	NA	NA	NA
WP_053539569.1\|3394839_3395700_+\|transposase	Rpn family recombination-promoting nuclease/putative transposase	NA	NA	NA	NA
WP_053539570.1\|3395725_3396562_+\|transposase	Rpn family recombination-promoting nuclease/putative transposase	NA	NA	NA	NA
WP_053539571.1\|3396587_3397424_+\|transposase	Rpn family recombination-promoting nuclease/putative transposase	NA	NA	NA	NA
WP_053539572.1\|3397449_3398346_+\|transposase	Rpn family recombination-promoting nuclease/putative transposase	NA	NA	NA	NA

DBSCAN-SWA_4

3740666 : 3809575

Ochrobactrum_phage(18.18%)

protease,integrase,transposase

attL 3737550:3737565|attR 3769418:3769433

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3737550:3737565	attL	NA	NA	NA	NA
WP_053539804.1\|3740666_3741629_-\|integrase	tyrosine-type recombinase/integrase	A0A1P8DJ76	Virus_Rctr85	3.6e-45	40.1
WP_053539805.1\|3742511_3743465_+	nucleotidyl transferase AbiEii/AbiGii toxin family protein	NA	NA	NA	NA
WP_053539806.1\|3743551_3744052_-	hypothetical protein	NA	NA	NA	NA
WP_053537530.1\|3744603_3745803_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_053539807.1\|3746316_3747045_-	ParA family protein	A0A240F4U1	Ochrobactrum_phage	2.5e-14	34.9
WP_053539808.1\|3747311_3748937_+	adenine deaminase	NA	NA	NA	NA
WP_053539809.1\|3749078_3749711_+	hypothetical protein	NA	NA	NA	NA
WP_053539810.1\|3749946_3751434_-\|transposase	IS1380 family transposase	NA	NA	NA	NA
WP_053539811.1\|3751944_3754995_-	DUF4114 domain-containing protein	NA	NA	NA	NA
WP_081424382.1\|3756635_3757271_+\|transposase	transposase	NA	NA	NA	NA
WP_053539812.1\|3757581_3758535_+	nucleotidyl transferase AbiEii/AbiGii toxin family protein	NA	NA	NA	NA
WP_053539806.1\|3758621_3759122_-	hypothetical protein	NA	NA	NA	NA
WP_053539813.1\|3759155_3760067_-	ParB/RepB/Spo0J family partition protein	S5WII0	Leptospira_phage	3.2e-11	38.8
WP_015081613.1\|3760066_3760816_-	ParA family protein	A0A240F4U1	Ochrobactrum_phage	6.0e-16	33.3
WP_053539816.1\|3761894_3762608_+	hypothetical protein	NA	NA	NA	NA
WP_053539817.1\|3762712_3763033_-	nucleotidyltransferase domain-containing protein	NA	NA	NA	NA
WP_053539818.1\|3763139_3763595_-	hypothetical protein	NA	NA	NA	NA
WP_053539820.1\|3763966_3764254_-	hypothetical protein	NA	NA	NA	NA
WP_053539821.1\|3764336_3764780_-	hypothetical protein	NA	NA	NA	NA
WP_053539822.1\|3764882_3765413_-	hypothetical protein	NA	NA	NA	NA
WP_053539823.1\|3765514_3765817_-	hypothetical protein	NA	NA	NA	NA
WP_081424250.1\|3765905_3766262_-	hypothetical protein	U5XH17	Phormidium_phage	6.3e-16	46.6
WP_053539824.1\|3766736_3768311_-	DNA polymerase	A0A0U4J920	Pseudomonas_phage	5.2e-62	32.8
WP_053539825.1\|3769897_3770845_+	hypothetical protein	NA	NA	NA	NA
3769418:3769433	attR	NA	NA	NA	NA
WP_015081642.1\|3770947_3771340_-	hypothetical protein	NA	NA	NA	NA
WP_081424251.1\|3771438_3771804_-	hypothetical protein	U5XGP6	Phormidium_phage	7.9e-30	57.8
WP_053539827.1\|3771983_3772208_-	hypothetical protein	NA	NA	NA	NA
WP_053539828.1\|3772294_3773932_+	hypothetical protein	NA	NA	NA	NA
WP_053539829.1\|3774349_3774892_+	hypothetical protein	NA	NA	NA	NA
WP_053539832.1\|3776313_3776805_+	hypothetical protein	NA	NA	NA	NA
WP_053541312.1\|3777335_3777653_+	hypothetical protein	NA	NA	NA	NA
WP_053539834.1\|3777649_3778015_+\|protease	aspartyl protease	NA	NA	NA	NA
WP_053539835.1\|3778098_3780174_+	flotillin family protein	A0A2I7RWB7	Vibrio_phage	5.9e-13	21.9
WP_053539836.1\|3780283_3780847_+	Uma2 family endonuclease	NA	NA	NA	NA
WP_053539837.1\|3781054_3781366_-	DUF433 domain-containing protein	NA	NA	NA	NA
WP_053539838.1\|3781445_3782186_+	3-oxoacyl-[acyl-carrier-protein] reductase	Q06VL0	Trichoplusia_ni_ascovirus	1.3e-18	33.2
WP_053539839.1\|3782261_3783344_-	undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase	NA	NA	NA	NA
WP_053539840.1\|3783635_3785345_+	chaperonin GroEL	A0A240F779	uncultured_virus	1.1e-161	56.5
WP_053539841.1\|3785422_3785908_-	DUF2996 domain-containing protein	NA	NA	NA	NA
WP_053539842.1\|3786302_3786578_-	MoaD/ThiS family protein	NA	NA	NA	NA
WP_053539843.1\|3786904_3788209_-	threonine synthase	NA	NA	NA	NA
WP_081424252.1\|3788301_3788598_-	hypothetical protein	NA	NA	NA	NA
WP_053539845.1\|3788617_3789052_+	CsbD family protein	NA	NA	NA	NA
WP_053539846.1\|3789844_3792412_+	hypothetical protein	NA	NA	NA	NA
WP_053539847.1\|3793235_3793799_+	DUF11 domain-containing protein	NA	NA	NA	NA
WP_081424253.1\|3793978_3795526_+	DUF11 domain-containing protein	NA	NA	NA	NA
WP_081424383.1\|3796470_3799542_+	hypothetical protein	NA	NA	NA	NA
WP_081424254.1\|3799538_3801719_+	OmpA family protein	NA	NA	NA	NA
WP_053539849.1\|3801771_3804573_+	isopeptide-forming domain-containing fimbrial protein	NA	NA	NA	NA
WP_053539850.1\|3805209_3806301_+	redox-regulated ATPase YchF	NA	NA	NA	NA
WP_053539851.1\|3806377_3807235_-	prephenate/arogenate dehydrogenase	NA	NA	NA	NA
WP_053539852.1\|3807421_3807997_+	DUF1517 domain-containing protein	NA	NA	NA	NA
WP_081424255.1\|3808084_3809575_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A1I9KF42	Aeromonas_phage	2.6e-26	29.1

DBSCAN-SWA_5

5462591 : 5523694

Escherichia_phage(28.57%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_053540970.1\|5462591_5464718_+\|protease	M48 family metalloprotease	NA	NA	NA	NA
WP_027402959.1\|5465324_5465837_+	RNA-binding protein	NA	NA	NA	NA
WP_053540971.1\|5466673_5467942_+	glycosyltransferase family 1 protein	NA	NA	NA	NA
WP_039202622.1\|5468151_5468427_+	hypothetical protein	NA	NA	NA	NA
WP_053540972.1\|5468842_5470591_+	fibronectin-binding domain-containing protein	A0A0P0YM59	Yellowstone_lake_phycodnavirus	5.9e-14	43.2
WP_053540974.1\|5471576_5473151_-	iron uptake porin	Q5GQG9	Synechococcus_phage	2.7e-10	46.2
WP_081424398.1\|5473403_5474420_+	zinc ABC transporter solute-binding protein	NA	NA	NA	NA
WP_053540975.1\|5474903_5475686_+	metal ABC transporter ATP-binding protein	A0A1M7XV31	Cedratvirus	2.3e-10	26.2
WP_053540976.1\|5476001_5476835_+	metal ABC transporter permease	NA	NA	NA	NA
WP_053540977.1\|5477365_5477773_-	HEPN domain-containing protein	NA	NA	NA	NA
WP_053540978.1\|5477765_5478092_-	nucleotidyltransferase domain-containing protein	NA	NA	NA	NA
WP_053540979.1\|5478441_5478876_-	putative toxin-antitoxin system toxin component, PIN family	NA	NA	NA	NA
WP_053540980.1\|5478865_5479087_-	hypothetical protein	NA	NA	NA	NA
WP_053540981.1\|5479552_5480611_-	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_053540982.1\|5480660_5481713_-	glycosyltransferase	NA	NA	NA	NA
WP_053540983.1\|5481985_5482810_-	hypothetical protein	NA	NA	NA	NA
WP_053540984.1\|5482903_5484040_-	EpsG family protein	NA	NA	NA	NA
WP_053541400.1\|5484805_5485423_-	DUF268 domain-containing protein	NA	NA	NA	NA
WP_053540985.1\|5485687_5487154_-	oligosaccharide flippase family protein	NA	NA	NA	NA
WP_053540986.1\|5487392_5487965_-	Uma2 family endonuclease	NA	NA	NA	NA
WP_053540987.1\|5488782_5490990_-	polysaccharide biosynthesis tyrosine autokinase	NA	NA	NA	NA
WP_053540988.1\|5491288_5492281_-	UDP-glucose 4-epimerase GalE	A0A2K9L5H6	Tupanvirus	3.4e-51	38.7
WP_081424323.1\|5492277_5493696_-	sugar transferase	NA	NA	NA	NA
WP_027402929.1\|5494981_5496079_+	tocopherol cyclase	NA	NA	NA	NA
WP_053540990.1\|5496853_5497897_-	3-deoxy-7-phosphoheptulonate synthase	A0A0U2D9U5	Escherichia_phage	1.2e-83	47.4
WP_053540991.1\|5498048_5498258_-	hypothetical protein	NA	NA	NA	NA
WP_053540992.1\|5498945_5499323_-	DUF1823 family protein	NA	NA	NA	NA
WP_053540993.1\|5500899_5503005_+	M3 family metallopeptidase	NA	NA	NA	NA
WP_027402924.1\|5503197_5503455_-	hypothetical protein	NA	NA	NA	NA
WP_053540994.1\|5503792_5504779_+	cyanophycin synthetase	NA	NA	NA	NA
WP_053541402.1\|5504782_5505133_-	hypothetical protein	NA	NA	NA	NA
WP_053537530.1\|5505252_5506452_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_053540995.1\|5507109_5507733_+	hypothetical protein	NA	NA	NA	NA
WP_053541403.1\|5507725_5508121_+	type II toxin-antitoxin system death-on-curing family toxin	A0A077SK56	Escherichia_phage	1.9e-08	32.5
WP_053540996.1\|5508521_5512211_-	magnesium chelatase subunit H	NA	NA	NA	NA
WP_053540997.1\|5512374_5513340_+	cell wall hydrolase	I1TJX3	Clostridium_phage	7.0e-33	45.0
WP_027402916.1\|5513980_5514562_-	Uma2 family endonuclease	NA	NA	NA	NA
WP_053541404.1\|5514641_5514959_+	hypothetical protein	NA	NA	NA	NA
WP_053540998.1\|5514955_5515318_+\|protease	aspartyl protease	NA	NA	NA	NA
WP_053540999.1\|5515409_5515724_+	hypothetical protein	NA	NA	NA	NA
WP_053541000.1\|5516424_5516895_+	hypothetical protein	NA	NA	NA	NA
WP_027402913.1\|5516975_5517293_+	hypothetical protein	NA	NA	NA	NA
WP_053541001.1\|5517289_5517652_+\|protease	aspartyl protease	NA	NA	NA	NA
WP_053541002.1\|5517687_5517954_+	CopG family transcriptional regulator	NA	NA	NA	NA
WP_027402910.1\|5518572_5518812_+	hypothetical protein	NA	NA	NA	NA
WP_053541003.1\|5518808_5519222_+	putative toxin-antitoxin system toxin component, PIN family	NA	NA	NA	NA
WP_053541004.1\|5519251_5519584_-	XisI protein	NA	NA	NA	NA
WP_053541005.1\|5519571_5519991_-	fatty-acid oxidation protein subunit alpha	NA	NA	NA	NA
WP_053541006.1\|5520102_5520432_-	XisI protein	NA	NA	NA	NA
WP_016949023.1\|5520419_5520836_-	hypothetical protein	NA	NA	NA	NA
WP_053541007.1\|5521154_5521823_+	hypothetical protein	NA	NA	NA	NA
WP_053541008.1\|5521947_5522268_+	hypothetical protein	NA	NA	NA	NA
WP_053541009.1\|5522381_5522597_+	hypothetical protein	NA	NA	NA	NA
WP_053541010.1\|5522735_5523095_+\|transposase	transposase	NA	NA	NA	NA
WP_053541405.1\|5523130_5523694_+\|transposase	IS630 family transposase	NA	NA	NA	NA

DBSCAN-SWA_6

5539222 : 5601322

Synechococcus_phage(21.43%)

tRNA,protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039204826.1\|5539222_5539648_+\|protease	protease inhibitor I42 family protein	NA	NA	NA	NA
WP_081424324.1\|5539631_5540048_-	hypothetical protein	NA	NA	NA	NA
WP_081424325.1\|5540301_5541126_+\|transposase	transposase	A0A7P9	Microcystis_virus	9.5e-47	45.0
WP_053537706.1\|5541661_5543206_+	DNA polymerase	A0A0U4J920	Pseudomonas_phage	5.3e-59	32.6
WP_039202566.1\|5543769_5544042_-	hypothetical protein	NA	NA	NA	NA
WP_053537530.1\|5544117_5545317_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_053541022.1\|5545372_5546173_-	type I methionyl aminopeptidase	NA	NA	NA	NA
WP_053541023.1\|5546184_5547183_-	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_053541024.1\|5548113_5548881_+	sterol desaturase family protein	NA	NA	NA	NA
WP_053541025.1\|5548897_5549176_-	hypothetical protein	NA	NA	NA	NA
WP_081424326.1\|5549599_5556031_+	non-ribosomal peptide synthetase	A0A2K9KZV5	Tupanvirus	8.7e-172	27.2
WP_053541408.1\|5556237_5557515_+	MFS transporter	A0A1B0RXA6	Streptococcus_phage	4.6e-24	26.9
WP_053541026.1\|5558203_5558503_+	2Fe-2S iron-sulfur cluster binding domain-containing protein	M4R1G0	Synechococcus_phage	3.1e-32	74.7
WP_039201987.1\|5558898_5559198_+	2Fe-2S iron-sulfur cluster binding domain-containing protein	M4QRZ2	Synechococcus_phage	5.3e-32	71.7
WP_053541027.1\|5559401_5560979_-	SpoIID/LytB domain-containing protein	Q2XU88	Pseudomonas_phage	1.3e-15	26.8
WP_053541028.1\|5562321_5562990_+	nucleotide exchange factor GrpE	NA	NA	NA	NA
WP_081424327.1\|5563193_5563520_+	STAS domain-containing protein	NA	NA	NA	NA
WP_081424328.1\|5563442_5563652_-	hypothetical protein	NA	NA	NA	NA
WP_053541030.1\|5563732_5564869_-	SpoIIE family protein phosphatase	NA	NA	NA	NA
WP_053541031.1\|5564876_5565650_-	DUF1350 family protein	NA	NA	NA	NA
WP_053541032.1\|5565735_5566422_-	hypothetical protein	NA	NA	NA	NA
WP_039203251.1\|5566537_5566729_-	hypothetical protein	NA	NA	NA	NA
WP_039203271.1\|5566828_5567602_-	imidazole glycerol phosphate synthase subunit HisF	NA	NA	NA	NA
WP_053541033.1\|5567908_5568310_-	hypothetical protein	NA	NA	NA	NA
WP_027402869.1\|5568315_5568528_-	hypothetical protein	NA	NA	NA	NA
WP_053541034.1\|5568543_5568783_+	hypothetical protein	NA	NA	NA	NA
WP_053541035.1\|5569214_5570462_+	OFA family MFS transporter	NA	NA	NA	NA
WP_053541036.1\|5571390_5571651_-	hypothetical protein	NA	NA	NA	NA
WP_053541409.1\|5571795_5572140_-	type II toxin-antitoxin system PemK/MazF family toxin	NA	NA	NA	NA
WP_053541037.1\|5572132_5572324_-	hypothetical protein	NA	NA	NA	NA
WP_053541038.1\|5572551_5573523_-	DUF1768 domain-containing protein	A0A141ZK81	Faustovirus	3.1e-12	33.6
WP_053541039.1\|5573539_5574601_-	hypothetical protein	NA	NA	NA	NA
WP_053541040.1\|5575872_5576121_+	hypothetical protein	NA	NA	NA	NA
WP_081424399.1\|5576113_5576524_+	putative toxin-antitoxin system toxin component, PIN family	NA	NA	NA	NA
WP_027402862.1\|5576880_5577111_+	hypothetical protein	NA	NA	NA	NA
WP_053541042.1\|5577100_5577451_+	type II toxin-antitoxin system PemK/MazF family toxin	NA	NA	NA	NA
WP_053541043.1\|5577596_5578166_-	hypothetical protein	NA	NA	NA	NA
WP_015078229.1\|5578274_5579648_-	phosphomethylpyrimidine synthase	NA	NA	NA	NA
WP_053541044.1\|5579771_5579960_+	hypothetical protein	NA	NA	NA	NA
WP_015078232.1\|5580171_5580597_+	GxxExxY protein	E5ESB4	Bathycoccus_sp._RCC1105_virus	2.1e-13	39.2
WP_015078233.1\|5580976_5581180_+	photosystem II reaction center protein PsbH	NA	NA	NA	NA
WP_053541045.1\|5581335_5581596_+	TatA/E family twin arginine-targeting protein translocase	NA	NA	NA	NA
WP_053541046.1\|5581592_5582237_+\|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA
WP_027402855.1\|5582360_5582498_+	photosystem II reaction center protein PsbN	NA	NA	NA	NA
WP_053541047.1\|5582575_5583562_-	glycosyltransferase	NA	NA	NA	NA
WP_053541048.1\|5583671_5584871_+	argininosuccinate synthase	NA	NA	NA	NA
WP_027402852.1\|5585116_5585746_-	DedA family protein	NA	NA	NA	NA
WP_081424400.1\|5586252_5586609_+	STAS domain-containing protein	NA	NA	NA	NA
WP_039201976.1\|5586689_5587790_-	Holliday junction branch migration DNA helicase RuvB	A0A127AWE7	Bacillus_phage	1.2e-09	25.1
WP_053541050.1\|5588384_5589521_-	cob(I)yrinic acid a,c-diamide adenosyltransferase	C7F482	Cyanophage	6.4e-86	48.0
WP_039201975.1\|5590046_5590583_+	hypothetical protein	NA	NA	NA	NA
WP_053541051.1\|5590624_5591635_+	DUF5357 domain-containing protein	NA	NA	NA	NA
WP_053541052.1\|5591651_5592431_+	ABC transporter permease subunit	NA	NA	NA	NA
WP_053541053.1\|5592514_5593156_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	1.1e-37	45.7
WP_053541054.1\|5593277_5594720_+	phosphoglucomutase/phosphomannomutase family protein	NA	NA	NA	NA
WP_053541055.1\|5594795_5595248_-\|transposase	IS200/IS605 family transposase	A0A1P8BMC0	Lactococcus_phage	2.7e-11	31.5
WP_053541056.1\|5595943_5598979_-\|protease	serine protease	NA	NA	NA	NA
WP_053541057.1\|5599505_5600078_-	hypothetical protein	NA	NA	NA	NA
WP_053541058.1\|5600218_5601322_-\|protease	trypsin-like serine protease	A0A1B1IT49	uncultured_Mediterranean_phage	2.0e-07	27.7

Anti-CRISPR protein detection

Acr_ID: NZ_CP011456.1|WP_027400762.1|2584495_2584726_-|hypothetical-protein

Click the colored protein region to show detailed information

Acr_ID: NZ_CP011456.1|WP_081424373.1|3387873_3388149_-|hypothetical-protein

Click the colored protein region to show detailed information

Acr_ID: NZ_CP011456.1|WP_053539816.1|3761894_3762608_+|hypothetical-protein

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_CP011456.1|WP_027400762.1|2584495_2584726_-|hypothetical-protein

2584495_2584726_-

76 aa aa

2532129-2612220

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP011456_3	Orphan	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	2566306-2566253	2
NZ_CP011456_17	Orphan	17.1\|2608115\|35\|NZ_CP011456\|CRISPRCasFinder	2608115-2608149	35	2610562-2610596	0
NZ_CP011456_17	Orphan	17.1\|2608115\|35\|NZ_CP011456\|CRISPRCasFinder	2608115-2608149	35	2610643-2610677	0
NZ_CP011456_17	Orphan	17.1\|2608115\|35\|NZ_CP011456\|CRISPRCasFinder	2608115-2608149	35	2610724-2610758	0
NZ_CP011456_17	Orphan	17.1\|2608115\|35\|NZ_CP011456\|CRISPRCasFinder	2608115-2608149	35	2610805-2610839	0
NZ_CP011456_17	Orphan	17.1\|2608115\|35\|NZ_CP011456\|CRISPRCasFinder	2608115-2608149	35	2610886-2610920	0
NZ_CP011456_41	TypeV	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	2544302-2544277	1
NZ_CP011456_41	TypeV	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	2559188-2559163	1
NZ_CP011456_41	TypeV	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	2598132-2598107	1
NZ_CP011456_41	TypeV	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	2562720-2562745	1
NZ_CP011456_45	Orphan	45.1\|5407068\|31\|NZ_CP011456\|CRISPRCasFinder	5407068-5407098	31	2544386-2544356	0
NZ_CP011456_45	Orphan	45.1\|5407068\|31\|NZ_CP011456\|CRISPRCasFinder	5407068-5407098	31	2544339-2544309	1

1. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to NZ_CP011456 position: 2566306-2566253, mismatch: 2

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgcctcttgccttttgccttgccataacgacaattttcaacgccaacctact	Protospacer
*******.***********************************.**********

2. spacer 17.1|2608115|35|NZ_CP011456|CRISPRCasFinder matches to NZ_CP011456 position: 2610562-2610596, mismatch: 0

gtgatgaaagttgtatttgtctgaatcaggataac	CRISPR spacer
gtgatgaaagttgtatttgtctgaatcaggataac	Protospacer
***********************************

3. spacer 17.1|2608115|35|NZ_CP011456|CRISPRCasFinder matches to NZ_CP011456 position: 2610643-2610677, mismatch: 0

gtgatgaaagttgtatttgtctgaatcaggataac	CRISPR spacer
gtgatgaaagttgtatttgtctgaatcaggataac	Protospacer
***********************************

4. spacer 17.1|2608115|35|NZ_CP011456|CRISPRCasFinder matches to NZ_CP011456 position: 2610724-2610758, mismatch: 0

gtgatgaaagttgtatttgtctgaatcaggataac	CRISPR spacer
gtgatgaaagttgtatttgtctgaatcaggataac	Protospacer
***********************************

5. spacer 17.1|2608115|35|NZ_CP011456|CRISPRCasFinder matches to NZ_CP011456 position: 2610805-2610839, mismatch: 0

gtgatgaaagttgtatttgtctgaatcaggataac	CRISPR spacer
gtgatgaaagttgtatttgtctgaatcaggataac	Protospacer
***********************************

6. spacer 17.1|2608115|35|NZ_CP011456|CRISPRCasFinder matches to NZ_CP011456 position: 2610886-2610920, mismatch: 0

gtgatgaaagttgtatttgtctgaatcaggataac	CRISPR spacer
gtgatgaaagttgtatttgtctgaatcaggataac	Protospacer
***********************************

7. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to NZ_CP011456 position: 2544302-2544277, mismatch: 1

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gaatgggcgcaggccctgcgccccta	Protospacer
************ *************

8. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to NZ_CP011456 position: 2559188-2559163, mismatch: 1

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gaatgggcgcaggccctgcgccccta	Protospacer
************ *************

9. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to NZ_CP011456 position: 2598132-2598107, mismatch: 1

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gaatgggcgcaggccctgcgccccta	Protospacer
************ *************

10. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to NZ_CP011456 position: 2562720-2562745, mismatch: 1

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gaatgggcgcaggccctgcgccccta	Protospacer
************ *************

11. spacer 45.1|5407068|31|NZ_CP011456|CRISPRCasFinder matches to NZ_CP011456 position: 2544386-2544356, mismatch: 0

actcctgatagcgcagcgtggcgttagccat	CRISPR spacer
actcctgatagcgcagcgtggcgttagccat	Protospacer
*******************************

12. spacer 45.1|5407068|31|NZ_CP011456|CRISPRCasFinder matches to NZ_CP011456 position: 2544339-2544309, mismatch: 1

actcctgatagcgcagcgtggcgttagccat	CRISPR spacer
actcctgatagcgcagcgtggggttagccat	Protospacer
********************* *********

NZ_CP011456.1|WP_081424373.1|3387873_3388149_-|hypothetical-protein

3387873_3388149_-

91 aa aa

3329436-3398346

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP011456_3	Orphan	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	3349861-3349914	2
NZ_CP011456_3	Orphan	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	3367502-3367555	2
NZ_CP011456_41	TypeV	41.1\|4837613\|26\|NZ_CP011456\|CRISPRCasFinder	4837613-4837638	26	3332016-3332041	2

1. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to NZ_CP011456 position: 3349861-3349914, mismatch: 2

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgcctcttgccttttgccttgccataacgacaattttcaacgccaacctact	Protospacer
*******.***********************************.**********

2. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to NZ_CP011456 position: 3367502-3367555, mismatch: 2

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgcctcttgccttttgccttgccataacgacaattttcaacgccaacctact	Protospacer
*******.***********************************.**********

3. spacer 41.1|4837613|26|NZ_CP011456|CRISPRCasFinder matches to NZ_CP011456 position: 3332016-3332041, mismatch: 2

gaatgggcgcagtccctgcgccccta	CRISPR spacer
gactgggcgcagaccctgcgccccta	Protospacer
** ********* *************

NZ_CP011456.1|WP_053539816.1|3761894_3762608_+|hypothetical-protein

3761894_3762608_+

237 aa aa

3740666-3809575

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP011456_3	Orphan	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	3783441-3783388	0
NZ_CP011456_3	Orphan	3.1\|793460\|54\|NZ_CP011456\|CRISPRCasFinder	793460-793513	54	3793165-3793218	2

1. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to NZ_CP011456 position: 3783441-3783388, mismatch: 0

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	Protospacer
******************************************************

2. spacer 3.1|793460|54|NZ_CP011456|CRISPRCasFinder matches to NZ_CP011456 position: 3793165-3793218, mismatch: 2

cttgccttttgccttttgccttgccataacgacaattttcaacaccaacctact	CRISPR spacer
cttgcctcttgccttttgccttgccataacgacaattttcaacgccaacctact	Protospacer
*******.***********************************.**********

2. NZ_CP011457

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP011457_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011457_1

9083-9191

Orphan

Consensus_repeat	Method
ATGGGTTTTGGCTTCTGGATATTCGGCATCAACAAAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP011457_1

>merge|NZ_CP011457|1|9083-9191|CRISPRCasFinder
ATGGGTTTTGGCTTCTGGATATTCGGCATCAACAAACGAATATTTAGCTAGAGAAGCCCAAGCCGCTTCTAAATGGGTTTTGGCTTCTGGATATTCGGCATCAACAAAC

>NZ_CP011457|1|1|9083-9191|CRISPRCasFinder
ATGGGTTTTGGCTTCTGGATATTCGGCATCAACAAAC	GAATATTTAGCTAGAGAAGCCCAAGCCGCTTCTAA
ATGGGTTTTGGCTTCTGGATATTCGGCATCAACAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011457.1\|WP_053541423.1\|4804_5146_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011457.1\|WP_053541429.1\|9886_10180_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011457.1\|WP_053541436.1\|18285_18720_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|176862
NZ_CP011457.1\|WP_081424409.1\|3539_3857_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011457.1\|WP_053541416.1\|841_1135_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011457.1\|WP_053541432.1\|13815_14514_-\|DevA-family-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|274374
NZ_CP011457.1\|WP_053541420.1\|3057_3309_-\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|237361
NZ_CP011457.1\|WP_053541428.1\|9433_9709_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011457.1\|WP_053541431.1\|12642_13239_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|375437
NZ_CP011457.1\|WP_081424411.1\|10943_11219_+\|HNH-endonuclease	unknown	unknown	gnl\|CDD\|366837
NZ_CP011457.1\|WP_081424402.1\|11624_12623_+\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|366166
NZ_CP011457.1\|WP_081424410.1\|5299_5566_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011457.1\|WP_053541435.1\|17210_18212_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225779
NZ_CP011457.1\|WP_053541422.1\|4226_4595_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011457.1\|WP_053541418.1\|1894_2179_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011457.1\|WP_053541433.1\|14538_15705_-\|FtsX-like-permease-family-protein	unknown	unknown	gnl\|CDD\|130253
NZ_CP011457.1\|WP_053541434.1\|15866_17165_-\|ABC-exporter-membrane-fusion-protein	unknown	unknown	gnl\|CDD\|213754
NZ_CP011457.1\|WP_053541426.1\|6515_6998_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011457.1\|WP_081424401.1\|7352_8147_+\|DNA-cytosine-methyltransferase	unknown	unknown	gnl\|CDD\|365904
NZ_CP011457.1\|WP_053541417.1\|1239_1434_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP011457.1\|WP_053541431.1\|12642_13239_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|375437	pfam17934, TetR_C_26, Tetracyclin repressor-like, C-terminal domain. This entry represents the C-terminal domain present in putative HTH-type transcriptional regulator. Family members are found in bacilli.	4.2702e-17
NZ_CP011457.1\|WP_053541434.1\|15866_17165_-\|ABC-exporter-membrane-fusion-protein	gnl\|CDD\|213754	TIGR02971, devB-like_secretion_protein, ABC exporter membrane fusion protein, DevB family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. DevB from Anabaena sp. strain PCC 7120 is partially characterized as a membrane fusion protein of the DevBCA ABC exporter, probably a glycolipid exporter, required for heterocyst formation. Most Cyanobacteria have one member only, but Nostoc sp. PCC 7120 has seven members.	3.4542e-89
NZ_CP011457.1\|WP_053541436.1\|18285_18720_-\|hypothetical-protein	gnl\|CDD\|176862	cd07820, SRPBCC_3, Ligand-binding SRPBCC domain of an uncharacterized subfamily of proteins. Uncharacterized group of the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain superfamily. SRPBCC domains have a deep hydrophobic ligand-binding pocket and they bind diverse ligands. SRPBCC domains include the steroidogenic acute regulatory protein (StAR)-related lipid transfer (START) domains of mammalian STARD1-STARD15, the C-terminal catalytic domains of the alpha oxygenase subunit of Rieske-type non-heme iron aromatic ring-hydroxylating oxygenases (RHOs_alpha_C), Class I and II phosphatidylinositol transfer proteins (PITPs), Bet v 1 (the major pollen allergen of white birch, Betula verrucosa), CoxG, CalC, and related proteins. Other members of the superfamily include PYR/PYL/RCAR plant proteins, the aromatase/cyclase (ARO/CYC) domains of proteins such as Streptomyces glaucescens tetracenomycin, and the SRPBCC domains of Streptococcus mutans Smu.440 and related proteins.	2.78279e-25
NZ_CP011457.1\|WP_081424402.1\|11624_12623_+\|alpha/beta-fold-hydrolase	gnl\|CDD\|366166	pfam00561, Abhydrolase_1, alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes.	1.86543e-16
NZ_CP011457.1\|WP_053541435.1\|17210_18212_-\|hypothetical-protein	gnl\|CDD\|225779	COG3239, DesA, Fatty acid desaturase [Lipid metabolism].	9.13682e-26
NZ_CP011457.1\|WP_053541433.1\|14538_15705_-\|FtsX-like-permease-family-protein	gnl\|CDD\|130253	TIGR01185, membrane_spanning_subunit, DevC protein. This model describes a predicted membrane subunit, DevC, of an ABC transporter known so far from two species of cyanobacteria. Some experimental data from mutational analysis suggest that this protein along with DevA and DevB encoded in the same operon may be involved in the transport/export of glycolipids. [Transport and binding proteins, Other].	2.8265e-155
NZ_CP011457.1\|WP_053541420.1\|3057_3309_-\|transcriptional-regulator	gnl\|CDD\|237361	PRK13355, PRK13355, bifunctional HTH-domain containing protein/aminotransferase; Provisional.	3.01903e-05
NZ_CP011457.1\|WP_053541432.1\|13815_14514_-\|DevA-family-ABC-transporter-ATP-binding-protein	gnl\|CDD\|274374	TIGR02982, heterocyst_DevA, ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.	7.12393e-139
NZ_CP011457.1\|WP_081424401.1\|7352_8147_+\|DNA-cytosine-methyltransferase	gnl\|CDD\|365904	pfam00145, DNA_methylase, C-5 cytosine-specific DNA methylase.	1.52529e-32
NZ_CP011457.1\|WP_081424411.1\|10943_11219_+\|HNH-endonuclease	gnl\|CDD\|366837	pfam01844, HNH, HNH endonuclease. His-Asn-His (HNH) proteins are a very common family of small nucleic acid-binding proteins that are generally associated with endonuclease activity.	5.49268e-09

>NZ_CP011457.1|WP_081424401.1|7352_8147_+|DNA-cytosine-methyltransferase
MRQLDLCSGVGAGFGIAGLRASWQLMGVCEIDDYCANILAKRFPGVHNYGDVRNLPVQDIRGIDVITASAPCQPFSINGKRLGARDERDCFPAVLETIARIQPKFFCIENVTGLLTCPNYPGQPSGSYFRGAIATINSYGYDAEWICVCSGHFAAPFLRERLLLVGVSRCIKLNWTITTPWPNQVRSTVEKAGVIAQRRSAKPGYPQRMVRYPAELARPLGVPSGNGTIRKQRQAAGNLLDPRVAAIGVNRVQYLATIAGVNNY
>NZ_CP011457.1|WP_053541426.1|6515_6998_+|hypothetical-protein
MNLSDLPQFERMPLQAPQSQDEKEIFYPQWTCFCCQDYGVINRNLARKIIPNYNSSEDKWPVCQNPNCHAFEQKFGANIGSENFDMRFSSLVCQKLDLIERQNWHNTVQRQVDIRALTKTMAMPGVPDRTDNDNREAQQRKKEAENFDWEAASTAYLGSE
>NZ_CP011457.1|WP_081424410.1|5299_5566_+|hypothetical-protein
MTHNQKFFHCLQSKLGDCWTLASIKPDLLDFFTNVFLQSTALKVLLTVLFKRLESDCSDSLRGIAILTKIFQPEAITSYLLSITLGVH
>NZ_CP011457.1|WP_053541423.1|4804_5146_-|hypothetical-protein
MIEPKEILIQAIEQAMSEGMTNAKLSRASGVNNSMISRLLSREREDIRSGDFFKLVHSLPEHIKSATLGKLGVVSFDLAAIAASSPPEEKARVLEAIAHSLTAQNKEKAKAVA
>NZ_CP011457.1|WP_053541422.1|4226_4595_-|hypothetical-protein
MNHREILIDALNKAITRGETAINISKMSGFSSSSLSRLMNGLQEDLYAGYYFSILDCLDEDIRKEALTKLGIKTEVHPEEMVKYLNGRQIAQLIPFLDKEDRADIMQALALSLRSSDQKVCA
>NZ_CP011457.1|WP_081424409.1|3539_3857_-|hypothetical-protein
MTEDILKQILNQCHQLDDTAISNIIKNLVDKLEYQEKSTLLEQLASDVSPEVKATLVKRLLADGGLQVTFGQSHVNVTNFYNIQSASTEQLSDIVLAIADIIRKS
>NZ_CP011457.1|WP_053541420.1|3057_3309_-|transcriptional-regulator
MAKRTKFIKLLERRSLTQEKFVELVENAWSNISGRKLSRQAVSAWVNGHAVPKFSPAEVLAVIEILECTLTELALAFPHEDDS
>NZ_CP011457.1|WP_053541418.1|1894_2179_-|hypothetical-protein
MISPEELQQSLKHFTSTDNYYRHLLSIRHTDGIQYLAQEAQCYWLIDVIASHQTKKLLADQMLKDFQLWLFVAACNHKPSGSQTRNFLAQINCN
>NZ_CP011457.1|WP_053541417.1|1239_1434_-|hypothetical-protein
MVVGDSHEFIKPKPHHQAVVTCWGDTPDPEITPYIRQDIEFTDFPLPEIKLFLVQGVLMLPGEY
>NZ_CP011457.1|WP_053541416.1|841_1135_-|hypothetical-protein
MQCENLESRFYKGLRILVRNPGLVAVQLAFLDNGHHQRISECSKDRFSAVLGCSGKSYDVIYHNSFVYITIRFCLPKRKAESLAKKLNQALDDWQSK
>NZ_CP011457.1|WP_053541428.1|9433_9709_-|hypothetical-protein
MDRNHYDKLSAEEKLEFLEIATEHLTIDEKAKLVKKLFPIKDDNGCSVTMGNSQVHANTVYQFNLNSKDEIKDIWEAIAETIKNNPNKKVE
>NZ_CP011457.1|WP_053541429.1|9886_10180_+|hypothetical-protein
MTNLITLQTIFIKDDVSIRLNKLDNHLKQIQCLLLDSNNNDVVKSLIRETMYFIEWIAPDIEFNYAFELANLARFLTRWLFSLEVWNNIEARNKIID
>NZ_CP011457.1|WP_081424411.1|10943_11219_+|HNH-endonuclease
MPTVPQEYWEKHHQKYGKSYWEKNSWKYKIAQNQSWKCPICGEPLFNGEELNTHHIVPVAQGGQDGIENLQHLHHACHKQEHSKTKSTCLK
>NZ_CP011457.1|WP_081424402.1|11624_12623_+|alpha/beta-fold-hydrolase
MSVQPVIFDTPFTYQTSPYWYCYYPFDIVARAERIRCSHFIQSTGVNLHIDVYERSEPNAPVFIFNHGGGGYSGLFVSLALAFYDLGYTVLLPDQKGQGRTSIEKVKGDFTLDEAAQNIADVAQWARHRYAGPIFMGGGSLGSGITYHAITKGAPVEAIATLQLYDFGDPKTALYLSRFNVLAGIPGVPWIIQFFIGLLEKLFPKLRIPYRPIARWHNMLDERDLSTGFFKKWSNDPYTLKSLTVHALASLFNSPAKQSMEYNQIPFLVINTMRDKMISPEVTIQSYERLAGPKKYVELDWGHFSLCPEFLQDFVTLADSWFRQYMPANYHT
>NZ_CP011457.1|WP_053541431.1|12642_13239_+|TetR/AcrR-family-transcriptional-regulator
MGRKTNSREQILAAARTVLAEKGYEATSISEIVARAGVTQAAFYLYFPSKSSLITTLTEEMFGKVQASLTQVTQGLTELDAILEASVIAIFPIIEQYSDIMPLIHSGAALIETVDRRENLFAPFKNWMYNLLNQAIANGQVSPGLNSMLAANYVVHLLERAGEDAFIYQKDIPLEIHISSVLCFIQQALGTPKGRINI
>NZ_CP011457.1|WP_053541432.1|13815_14514_-|DevA-family-ABC-transporter-ATP-binding-protein
MNNKPIIEIENLEHFFGQGDLNKQILFNINFKVYPGEITIMEGPSGSGKTTLLTLIGGLRSVQTGSLKVLGQELLGSSEQKLMQTRRYIGYIFQSHNLLRFLTAKQNVEMSLELHDNLSRKEIRERSVKMLTDVGLGERIDSYPENLSGGQKQRVAIARALASQPKLVLADEPTASLDKYSGRAVVELMQKLAKHQGCSILIVTHDNRILDIADRIIKMEDGHLSEELVALI
>NZ_CP011457.1|WP_053541433.1|14538_15705_-|FtsX-like-permease-family-protein
MFRRNTPLAWLQLTRVKTRFIVALIGIAFADILMFMQLGFQDGLYDCNTIFHRNLEADIVMLSSQTIGIYYMESFPRPLLYDTLNYEGVESVNSTYVDVLAWKNPNTAQSYPILTYAFDPNKPILHLQGVEEHLDHLKQPDTVLFDITSRPEWGTNFMKKKLEKGESVYTEVNDRRINLAGLFTMGPSFAADANLITSDLNFLRIVKNRSPQQIDVGLINVKLGYNIQKLLEVLRKNLPQKDVKVMTKQEFVDLETKYWAESSPIGVIFGLGVIMGFTVGAVIVYQILYADVAEHLSEYATLKAMGYSHKYLLSLVFQEALILAFFGYLPGYIISLLLYDLTRAESFLPIFMTVNRGVNILILTVLMCFISGVIAVRKLKDADPADVF
>NZ_CP011457.1|WP_053541434.1|15866_17165_-|ABC-exporter-membrane-fusion-protein
MQKLQTQVSILSKLPKWKFITLIVVGSSIAITIPIYYFLNTKTVKEKPLVTSAEPKAITALGRLEPEGEVINISAPNTLEGARVKQLLIKEGDWVKAGQIIAILDRRDRLDAQFKQSQKEVAVAQARLDLVKSGSEEGEITSQKAIVARLEIELFQEGKVQKAKMAGLRTKLLREQDVQQAKLLSLKAELNNAVIECQRYETLFQQGAVPASTLDTKCLASKTSNERFKEAEAAKNQVIETLQEQINETQASRSKSLESLVQQILEAKATLKRIQKVRPEDVKVAQTEVESAIAAAKKAQQELDLAYVRTFKEGKILKLHTYPGEAVDSDGVVELGQTNQMYAVAEVYETNIGKVRIGQKATISSEYGGFTGELQGAVENVGLKIGKRNILDTDPAANVDVRVMEVKIKINPEDSQKVTDLTNLQVKVSIHI
>NZ_CP011457.1|WP_053541435.1|17210_18212_-|hypothetical-protein
MLKEDYVLIAKKLAKSGSLRVNNFYGTLTILAEIACFAIGLALLLKTSYFSFSYWILEMFLGLSLFRFFVILHECGHKALFSYKFMNTIAGTLISPLCIIPYICWRNIHYQHHKWVGVVDKDPTQAILLKLRENSKLTHNLFRIIWKTWFPISFFKLIFQVFWLYPLNEYKEKSYTNAKAGFVSLIAIILPHILVIGYLGVVKYLIIFTPMLLIYAVWFENMNFSQHVGLFPYLSIHHPKPIPLHKQDSISRTSEINPILAVLFCYNFNLHIEHHLFPAAPWYQLPKVKNCLESANNLDIDYKGVGFPDFVLQLRRQDPVDIYLKTLPPHEEK
>NZ_CP011457.1|WP_053541436.1|18285_18720_-|hypothetical-protein
MEYKKTTNIDAPVEKVFGFCASPYGFEKHFPHQVRWINKHEEWNIGSIIEFKFRFFFTWMYWKTEITAYEENELFADIMKVGFPYKYFNHYHFFEPVGNQTIYTDQIEFSLGFGNLIDKTVGKMIIVSIFNKRHKNLKKCLCKY

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP011457_1	1.1\|9120\|35\|NZ_CP011457\|CRISPRCasFinder	9120-9154	35	NZ_CP011457	Anabaena sp. WA102 plasmid, complete sequence	9120-9154	0	1.0

1. spacer 1.1|9120|35|NZ_CP011457|CRISPRCasFinder matches to NZ_CP011457 (Anabaena sp. WA102 plasmid, complete sequence) position: , mismatch: 0, identity: 1.0

gaatatttagctagagaagcccaagccgcttctaa	CRISPR spacer
gaatatttagctagagaagcccaagccgcttctaa	Protospacer
***********************************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

24782 : 43383

Tupanvirus(33.33%)

transposase,integrase

attL 16855:16870|attR 49190:49205

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
16855:16870	attL	NA	NA	NA	NA
WP_081424154.1\|24782_26471_+\|transposase	IS1634 family transposase	NA	NA	NA	NA
WP_081424403.1\|26622_26814_+	C4-dicarboxylate ABC transporter	NA	NA	NA	NA
WP_053541439.1\|26740_28561_-	type I polyketide synthase	NA	NA	NA	NA
WP_081424404.1\|28566_31077_-	AMP-binding protein	A0A2K9KZV5	Tupanvirus	8.2e-09	20.3
WP_053541491.1\|31289_31541_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_053541440.1\|31814_31994_-	hypothetical protein	NA	NA	NA	NA
WP_053541441.1\|32174_33116_+	DUF4351 domain-containing protein	NA	NA	NA	NA
WP_053541442.1\|33267_33537_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_053541443.1\|33538_33991_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_053541444.1\|33970_34444_-	DUF3368 domain-containing protein	NA	NA	NA	NA
WP_053541445.1\|34448_34724_-	UPF0175 family protein	NA	NA	NA	NA
WP_053541446.1\|35046_35604_+	hypothetical protein	NA	NA	NA	NA
WP_053541447.1\|35620_35962_-	hypothetical protein	NA	NA	NA	NA
WP_053541448.1\|36001_36964_-\|integrase	phage integrase family protein	A0A1P8DJ76	Virus_Rctr85	3.9e-52	42.8
WP_053541449.1\|37445_38558_+\|integrase	tyrosine-type recombinase/integrase	A0A1P8DJJ6	Virus_Rctr41k	5.8e-07	24.5
WP_053541450.1\|38557_40024_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_053541451.1\|40016_42467_+\|integrase	integrase	NA	NA	NA	NA
WP_053541452.1\|42444_43383_+\|transposase	transposase	NA	NA	NA	NA
49190:49205	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP011456

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CRISPR-Cas detection and classification

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