CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP009236	Lactiplantibacillus plantarum strain 5-2 chromosome, complete genome	0 crisprs	csa3,DinG,cas3,DEDDh	0	0	8	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

323257 : 436622

114

Tupanvirus(16.67%)

protease,transposase,tRNA,bacteriocin

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_044428951.1\|323257_323821_-\|protease	matrixin family metalloprotease	NA	NA	NA	NA
WP_044428954.1\|324013_324682_+	ribose 5-phosphate isomerase A	NA	NA	NA	NA
WP_053566420.1\|324839_326345_+	multicopper oxidase domain-containing protein	NA	NA	NA	NA
WP_013355173.1\|326609_326978_+	DUF1304 domain-containing protein	NA	NA	NA	NA
WP_003641932.1\|327090_327600_-	YbhB/YbcL family Raf kinase inhibitor-like protein	NA	NA	NA	NA
WP_003643764.1\|327630_328827_-	DUF2075 domain-containing protein	NA	NA	NA	NA
WP_003641934.1\|328936_329407_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA
WP_003641935.1\|329425_329881_+	hypothetical protein	NA	NA	NA	NA
WP_003641936.1\|329984_330557_+	acetyl-CoA carboxylase biotin carboxyl carrier protein subunit	NA	NA	NA	NA
WP_011100977.1\|330722_331643_-	ribonucleoside hydrolase RihC	NA	NA	NA	NA
WP_015379753.1\|331779_332679_+	oxidoreductase	NA	NA	NA	NA
WP_053566421.1\|333118_334999_+	hypothetical protein	NA	NA	NA	NA
WP_011679766.1\|335170_335617_-	ribonuclease H	NA	NA	NA	NA
WP_003641940.1\|335854_337381_+	ABC transporter permease/substrate-binding protein	NA	NA	NA	NA
WP_015825109.1\|337381_338353_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.7e-23	31.7
WP_053566422.1\|338430_339762_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_053566423.1\|340227_341745_+	glycerol kinase GlpK	NA	NA	NA	NA
WP_003643774.1\|341759_343589_+	type 1 glycerol-3-phosphate oxidase	NA	NA	NA	NA
WP_003643775.1\|343603_344326_+	aquaporin family protein	M1HWZ0	Paramecium_bursaria_Chlorella_virus	3.2e-30	31.9
WP_053566424.1\|344908_348604_+	MucBP domain-containing protein	NA	NA	NA	NA
WP_095587192.1\|350156_350573_+	EndoU domain-containing protein	NA	NA	NA	NA
WP_053566425.1\|350612_350927_+	hypothetical protein	NA	NA	NA	NA
WP_080373188.1\|350988_351141_+	glycohydrolase toxin TNT-related protein	NA	NA	NA	NA
WP_053566426.1\|351151_351559_+	immunity 63 family protein	NA	NA	NA	NA
WP_080373231.1\|352059_352398_+	hypothetical protein	NA	NA	NA	NA
WP_011100991.1\|352737_353016_+	hypothetical protein	NA	NA	NA	NA
WP_053566427.1\|353312_354230_+	hypothetical protein	NA	NA	NA	NA
WP_016526893.1\|354236_354410_+	hypothetical protein	NA	NA	NA	NA
WP_016511577.1\|354954_355497_+	ankyrin repeat domain-containing protein	NA	NA	NA	NA
WP_053566428.1\|355511_355775_+	hypothetical protein	NA	NA	NA	NA
WP_003643788.1\|355891_356095_+	hypothetical protein	NA	NA	NA	NA
WP_003646452.1\|356219_356459_+	hypothetical protein	NA	NA	NA	NA
WP_003646453.1\|356476_356863_+	hypothetical protein	NA	NA	NA	NA
WP_080373189.1\|357312_357504_+	hypothetical protein	NA	NA	NA	NA
WP_053566429.1\|357895_358141_+	hypothetical protein	NA	NA	NA	NA
WP_053566430.1\|358346_358580_+	hypothetical protein	NA	NA	NA	NA
WP_003643792.1\|358708_359128_+	hypothetical protein	NA	NA	NA	NA
WP_053566431.1\|359419_359884_+	hypothetical protein	NA	NA	NA	NA
WP_053566432.1\|360219_360837_-	sugar O-acetyltransferase	NA	NA	NA	NA
WP_053566433.1\|360840_361995_-	MFS transporter	NA	NA	NA	NA
WP_053566434.1\|361998_362790_-	HAD family hydrolase	NA	NA	NA	NA
WP_003641965.1\|362860_363733_-	AraC family transcriptional regulator	NA	NA	NA	NA
WP_053566435.1\|363892_364708_+	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
WP_003643798.1\|365233_366610_+	branched-chain amino acid transport system II carrier protein	NA	NA	NA	NA
WP_011100995.1\|366654_367839_+	cation:proton antiporter	NA	NA	NA	NA
WP_003643800.1\|368500_368644_+	hypothetical protein	NA	NA	NA	NA
WP_050495850.1\|368655_368844_+	hypothetical protein	NA	NA	NA	NA
WP_071665317.1\|369113_369320_-	hypothetical protein	NA	NA	NA	NA
WP_080029873.1\|369289_369619_-\|transposase	transposase	NA	NA	NA	NA
WP_117288141.1\|369725_369929_-\|transposase	transposase	NA	NA	NA	NA
WP_080373190.1\|370792_370936_+	hypothetical protein	NA	NA	NA	NA
WP_003643805.1\|371347_372016_-	hypothetical protein	NA	NA	NA	NA
WP_003641972.1\|372012_372186_-\|bacteriocin	two-peptide bacteriocin plantaricin JK subunit PlnK	NA	NA	NA	NA
WP_003641973.1\|372216_372384_-\|bacteriocin	two-peptide bacteriocin plantaricin JK subunit PlnJ	NA	NA	NA	NA
WP_053566436.1\|373490_374237_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_003643807.1\|374368_374518_+	hypothetical protein	NA	NA	NA	NA
WP_003643808.1\|374531_375872_+	GHKL domain-containing protein	NA	NA	NA	NA
WP_003643809.1\|375872_376616_+	response regulator transcription factor	NA	NA	NA	NA
WP_003643810.1\|376920_377694_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_003643811.1\|377792_377951_-\|bacteriocin	two-peptide bacteriocin plantaricin EF subunit PlnF	NA	NA	NA	NA
WP_003641985.1\|377975_378146_-\|bacteriocin	two-peptide bacteriocin plantaricin EF subunit PlnE	NA	NA	NA	NA
WP_053566437.1\|378412_380563_+	peptide cleavage/export ABC transporter	W8CYL7	Bacillus_phage	8.0e-45	27.9
WP_053566438.1\|380578_381955_+	HlyD family secretion protein	NA	NA	NA	NA
WP_053566439.1\|382799_383468_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_053566440.1\|383554_384235_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_053566441.1\|384328_385015_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_076633895.1\|385175_385463_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_003646479.1\|385474_385768_+	HigA family addiction module antidote protein	M9MUN2	Rhodococcus_phage	9.9e-07	48.3
WP_053566442.1\|386057_388367_-	ATP-binding domain-containing protein	NA	NA	NA	NA
WP_021356643.1\|388625_389402_+	carbon-nitrogen family hydrolase	NA	NA	NA	NA
WP_003643815.1\|389841_390858_+\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA
WP_003641997.1\|391265_391976_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_003641998.1\|392048_393410_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA
WP_003641999.1\|393416_393605_+	hypothetical protein	NA	NA	NA	NA
WP_053566443.1\|393594_394017_+	DUF3284 domain-containing protein	NA	NA	NA	NA
WP_053567057.1\|394239_395595_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA
WP_003642002.1\|395612_397049_+	6-phospho-beta-glucosidase	A0A0B5JD41	Pandoravirus	9.7e-31	25.5
WP_003642003.1\|397169_398066_+	ROK family protein	NA	NA	NA	NA
WP_053267442.1\|398215_398962_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
WP_053566444.1\|399074_400088_+\|tRNA	tRNA-dihydrouridine synthase family protein	NA	NA	NA	NA
WP_047672680.1\|400541_401675_+	hypothetical protein	NA	NA	NA	NA
WP_053566445.1\|401679_402474_+	hypothetical protein	NA	NA	NA	NA
WP_011101010.1\|402643_403561_+	Ppx/GppA family phosphatase	NA	NA	NA	NA
WP_003642009.1\|403606_404881_+	hydroxymethylglutaryl-CoA reductase, degradative	NA	NA	NA	NA
WP_053566446.1\|404873_405833_+	hypothetical protein	NA	NA	NA	NA
WP_053566447.1\|405854_406559_+	NAD-dependent protein deacylase	NA	NA	NA	NA
WP_003642012.1\|406558_407401_+	DUF72 domain-containing protein	NA	NA	NA	NA
WP_003646492.1\|407997_408387_+	NUDIX domain-containing protein	NA	NA	NA	NA
WP_003643823.1\|408708_410760_+\|tRNA	methionine--tRNA ligase	A0A1V0SHR2	Klosneuvirus	2.7e-90	35.8
WP_053566448.1\|410992_412177_+	multidrug effflux MFS transporter	NA	NA	NA	NA
WP_003643825.1\|412299_413076_+	TatD family hydrolase	NA	NA	NA	NA
WP_003643826.1\|413062_413626_+	ribonuclease M5	NA	NA	NA	NA
WP_003642019.1\|413622_414513_+	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA
WP_003642020.1\|414617_414869_+	Veg family protein	NA	NA	NA	NA
WP_053566449.1\|415001_415868_+	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	NA	NA	NA	NA
WP_003642022.1\|416177_417122_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_003642023.1\|417390_418089_+	ABC transporter ATP-binding protein	A0A1V0SGN0	Hokovirus	1.2e-15	27.8
WP_003646500.1\|418081_418879_+	metal ABC transporter permease	NA	NA	NA	NA
WP_162899478.1\|419247_419409_+	hypothetical protein	NA	NA	NA	NA
WP_003646503.1\|419958_420501_+	ankyrin repeat domain-containing protein	NA	NA	NA	NA
WP_003642029.1\|420515_420779_+	hypothetical protein	NA	NA	NA	NA
WP_003642030.1\|421271_422108_+	pur operon repressor	NA	NA	NA	NA
WP_044429181.1\|422176_423559_+	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	A0A2K9L140	Tupanvirus	5.7e-28	33.2
WP_044429183.1\|423794_424619_+	serine hydrolase	NA	NA	NA	NA
WP_003643830.1\|424984_425965_+	ribose-phosphate diphosphokinase	A0A2K9L8D8	Tupanvirus	4.9e-42	36.3
WP_015379808.1\|426253_427276_+	YdcF family protein	NA	NA	NA	NA
WP_024971609.1\|427358_428345_+	hypothetical protein	NA	NA	NA	NA
WP_053566450.1\|428514_429324_-	sugar-phosphatase	NA	NA	NA	NA
WP_169484456.1\|429343_430702_-	HD domain-containing protein	A0A1B1ISR1	uncultured_Mediterranean_phage	5.2e-26	32.9
WP_021356493.1\|430710_431643_-	lipoate--protein ligase family protein	NA	NA	NA	NA
WP_003642040.1\|432003_432444_+	DUF1934 domain-containing protein	NA	NA	NA	NA
WP_003642041.1\|432488_433097_+	DNA-directed RNA polymerase subunit delta	NA	NA	NA	NA
WP_003642042.1\|433269_434883_+	CTP synthase	A0A1J0FA14	Only_Syngen_Nebraska_virus	1.2e-143	49.9
WP_053566451.1\|435350_436622_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	3.4e-96	43.7

DBSCAN-SWA_2

566334 : 574946

Streptococcus_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003643940.1\|566334_568032_+	DNA polymerase III subunit gamma/tau	A0A1U9WR94	Streptococcus_virus	3.9e-55	37.0
WP_003640956.1\|568053_568362_+	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA
WP_003637790.1\|568377_568977_+	recombination protein RecR	NA	NA	NA	NA
WP_003640957.1\|568991_569243_+	YaaL family protein	NA	NA	NA	NA
WP_016510978.1\|569628_570294_+	dTMP kinase	M1PSC7	Streptococcus_phage	1.4e-53	52.7
WP_003640965.1\|570290_570620_+	cyclic-di-AMP receptor	NA	NA	NA	NA
WP_003640966.1\|570636_571656_+	DNA polymerase III subunit delta'	M1NSC1	Streptococcus_phage	2.1e-32	33.5
WP_003640967.1\|571680_572028_+	DNA replication initiation control protein YabA	M1PFV3	Streptococcus_phage	2.4e-12	33.3
WP_044429290.1\|572126_573023_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	7.5e-82	55.7
WP_003640969.1\|573026_573812_+	acyl-ACP thioesterase	NA	NA	NA	NA
WP_013355240.1\|573950_574946_+	UDP-glucose 4-epimerase GalE	A0A2K9L5H6	Tupanvirus	2.0e-51	38.5

DBSCAN-SWA_3

962263 : 1049130

Lactobacillus_phage(58.62%)

protease,head,portal,integrase,terminase,capsid,tRNA,holin,transposase,tail

attL 975089:975104|attR 984371:984386

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003641341.1\|962263_962584_+\|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	NA	NA	NA	NA
WP_003644129.1\|962583_964047_+\|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	NA	NA	NA	NA
WP_003641343.1\|964046_965471_+\|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	NA	NA	NA	NA
WP_003641344.1\|965575_966598_+	diacylglycerol kinase	A0A1V0SBJ0	Catovirus	2.6e-17	26.5
WP_003644130.1\|966931_968305_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	A0A2K5B251	Erysipelothrix_phage	4.2e-124	50.0
WP_003641346.1\|968758_969337_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_027821303.1\|969603_971943_+	cation-translocating P-type ATPase	M1HI01	Paramecium_bursaria_Chlorella_virus	3.2e-39	24.9
WP_003644132.1\|972183_973500_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA
WP_003641349.1\|973492_974377_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_003644133.1\|974501_975380_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
975089:975104	attL	NA	NA	NA	NA
WP_027821302.1\|975404_976181_+	lysozyme	A0A141HSE6	Bacillus_phage	2.6e-06	31.1
WP_003641352.1\|976336_976702_-	DUF4828 domain-containing protein	NA	NA	NA	NA
WP_003638174.1\|977045_977246_+	cold-shock protein	Q9AZD3	Lactococcus_phage	3.1e-20	71.4
WP_003644135.1\|977432_978440_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_003641354.1\|978452_979787_+	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	2.9e-37	30.9
WP_022638734.1\|980028_981210_-\|integrase	site-specific integrase	B4XYR4	Lactobacillus_phage	1.2e-58	37.4
WP_053566511.1\|981518_982235_-	hypothetical protein	NA	NA	NA	NA
WP_027821295.1\|982360_983032_-	LexA family transcriptional regulator	D7RWL5	Brochothrix_phage	3.7e-41	55.0
WP_027821294.1\|983224_983440_+	helix-turn-helix transcriptional regulator	A0A2H4JBV7	uncultured_Caudovirales_phage	5.9e-17	71.0
WP_050482328.1\|983446_984190_+	ORF6C domain-containing protein	A0A1P8BM06	Lactococcus_phage	3.7e-50	45.2
WP_027821292.1\|984305_984566_+	hypothetical protein	NA	NA	NA	NA
984371:984386	attR	NA	NA	NA	NA
WP_053566512.1\|984707_984956_+	hypothetical protein	E9LUT6	Lactobacillus_phage	1.6e-34	81.8
WP_053566513.1\|984958_985159_+	hypothetical protein	E9LUT7	Lactobacillus_phage	3.4e-27	90.9
WP_163621593.1\|985170_985335_+	hypothetical protein	E9LUT8	Lactobacillus_phage	9.7e-12	67.3
WP_169790717.1\|985337_985484_+	hypothetical protein	E9LUT9	Lactobacillus_phage	3.4e-16	89.4
WP_053566514.1\|985483_986344_+	DUF1351 domain-containing protein	A0A2D1GPE4	Lactobacillus_phage	5.1e-35	33.6
WP_053566515.1\|986343_986970_+	ERF family protein	D7RWM8	Brochothrix_phage	1.0e-13	38.2
WP_053566516.1\|986966_987428_+	single-stranded DNA-binding protein	A0A218MNB4	uncultured_virus	4.8e-40	71.8
WP_053566517.1\|987442_988135_+	hypothetical protein	E9LUU3	Lactobacillus_phage	3.9e-118	89.6
WP_053566518.1\|988176_989013_+	helix-turn-helix domain-containing protein	U5U793	Lactobacillus_phage	9.6e-39	42.2
WP_053566519.1\|989016_989325_+	hypothetical protein	E9LUN7	Lactobacillus_phage	1.5e-45	90.2
WP_114619700.1\|989317_989485_+	hypothetical protein	A0A2P0ZLB5	Lactobacillus_phage	8.6e-16	85.5
WP_187329003.1\|989487_989664_+	hypothetical protein	E9LUP2	Lactobacillus_phage	7.9e-20	82.8
WP_080373197.1\|989656_990049_+	hypothetical protein	A0A2P0ZLC1	Lactobacillus_phage	1.6e-12	45.1
WP_053566520.1\|990045_990468_+	DUF1642 domain-containing protein	A0A2P0ZLB8	Lactobacillus_phage	3.5e-45	58.6
WP_053566521.1\|990464_990812_+	hypothetical protein	A0A142F1A4	Bacillus_phage	8.4e-13	44.3
WP_080373198.1\|990808_990979_+	hypothetical protein	E9LUP4	Lactobacillus_phage	3.2e-18	87.5
WP_053566522.1\|990959_991385_+	transcriptional regulator	E9LUP5	Lactobacillus_phage	2.4e-62	81.6
WP_053566523.1\|991902_993132_+	ATP-binding protein	NA	NA	NA	NA
WP_053566524.1\|993207_993732_+	RloB domain-containing protein	NA	NA	NA	NA
WP_053566525.1\|993796_994153_+	hypothetical protein	NA	NA	NA	NA
WP_053566526.1\|994658_994931_+	hypothetical protein	NA	NA	NA	NA
WP_053566528.1\|995222_995453_+	hypothetical protein	NA	NA	NA	NA
WP_080373199.1\|995674_996109_+\|terminase	phage terminase small subunit P27 family	B8R648	Lactobacillus_phage	4.9e-18	38.5
WP_053566529.1\|996095_998012_+\|terminase	terminase large subunit	A0A0M7RDK9	Lactobacillus_phage	1.5e-135	41.6
WP_053566530.1\|998233_999352_+\|portal	phage portal protein	Q9AZM4	Lactococcus_phage	4.5e-68	40.9
WP_027821274.1\|999323_999929_+\|head,protease	HK97 family phage prohead protease	B8R651	Lactobacillus_phage	3.1e-39	48.5
WP_053566531.1\|999935_1001318_+\|capsid	phage major capsid protein	A0A0M7RF71	Lactobacillus_phage	5.2e-98	62.3
WP_053566532.1\|1001406_1001685_+	hypothetical protein	A0A2P0ZLF2	Lactobacillus_phage	5.4e-31	70.3
WP_053566533.1\|1001685_1002033_+\|head	phage head closure protein	A0A2P0ZLF0	Lactobacillus_phage	1.6e-56	94.8
WP_053566534.1\|1002035_1002443_+	HK97 gp10 family phage protein	A0A2P0ZLE6	Lactobacillus_phage	2.2e-65	93.1
WP_053566535.1\|1002442_1002823_+	DUF806 family protein	A0A2P0ZLF4	Lactobacillus_phage	1.7e-59	89.7
WP_053566536.1\|1002839_1003493_+\|tail	phage tail protein	A0A2P0ZLH1	Lactobacillus_phage	1.4e-114	96.8
WP_053566537.1\|1003569_1003944_+\|tail	phage tail assembly chaperone	A0A2P0ZLH4	Lactobacillus_phage	6.4e-35	64.5
WP_053566539.1\|1004208_1009206_+	C40 family peptidase	A0A2P0ZLG0	Lactobacillus_phage	3.0e-289	50.8
WP_053566540.1\|1009282_1011055_+\|tail	phage tail family protein	A0A2P0ZLH2	Lactobacillus_phage	0.0e+00	94.9
WP_053566541.1\|1011119_1013534_+	hypothetical protein	A0A2P0ZLF8	Lactobacillus_phage	0.0e+00	90.0
WP_053566542.1\|1013550_1016124_+\|tail	phage tail protein	A0A2K9VCB6	Lactobacillus_phage	1.1e-274	50.5
WP_053566543.1\|1016116_1016368_+	hypothetical protein	A0A2K9VDF6	Lactobacillus_phage	6.6e-28	97.1
WP_003644513.1\|1016371_1016533_+	hypothetical protein	A0A2P0ZLG1	Lactobacillus_phage	9.5e-20	100.0
WP_053566544.1\|1016516_1016876_+	hypothetical protein	A0A2P0ZLF6	Lactobacillus_phage	8.6e-45	78.2
WP_053566545.1\|1017900_1018170_+	hemolysin XhlA family protein	E9LUR9	Lactobacillus_phage	3.8e-29	82.0
WP_053566546.1\|1018181_1018715_+\|holin	holin	E9LUS0	Lactobacillus_phage	8.6e-41	97.9
WP_053566547.1\|1018965_1019313_+	hypothetical protein	NA	NA	NA	NA
WP_003643301.1\|1019730_1020171_-	universal stress protein	NA	NA	NA	NA
WP_003644138.1\|1020304_1021612_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA
WP_003643303.1\|1021604_1022471_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_003643304.1\|1022620_1022821_-	hypothetical protein	NA	NA	NA	NA
WP_003643305.1\|1023020_1023461_+	hypothetical protein	NA	NA	NA	NA
WP_003646269.1\|1023894_1024458_+	hypothetical protein	NA	NA	NA	NA
WP_172436367.1\|1024541_1025897_-	NADP-specific glutamate dehydrogenase	NA	NA	NA	NA
WP_053566548.1\|1026155_1027331_+	serine hydrolase	NA	NA	NA	NA
WP_003646267.1\|1027519_1028638_+	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	A0A0N9R0B2	Chrysochromulina_ericina_virus	2.7e-20	31.2
WP_003643314.1\|1029023_1029953_+	YihY/virulence factor BrkB family protein	NA	NA	NA	NA
WP_003643315.1\|1030142_1030859_+	aquaporin family protein	A0A1J0F964	Only_Syngen_Nebraska_virus	5.6e-19	32.7
WP_053566549.1\|1030879_1031809_-\|transposase	IS30 family transposase	H7BW61	unidentified_phage	9.4e-19	32.5
WP_053566550.1\|1032009_1032792_+	glycosyltransferase	NA	NA	NA	NA
WP_053566551.1\|1032785_1033625_+	LicD family protein	NA	NA	NA	NA
WP_053566552.1\|1033680_1034781_+	EpsG family protein	NA	NA	NA	NA
WP_053566553.1\|1034796_1035744_+	glycosyltransferase	NA	NA	NA	NA
WP_053566554.1\|1035733_1036813_+	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_141708334.1\|1036796_1038323_+	transporter	NA	NA	NA	NA
WP_053566556.1\|1038345_1039023_+	dTMP kinase	M1PSC7	Streptococcus_phage	4.9e-49	49.0
WP_053566557.1\|1039012_1039660_+	hypothetical protein	NA	NA	NA	NA
WP_053566558.1\|1039677_1040262_+	CpsD/CapB family tyrosine-protein kinase	NA	NA	NA	NA
WP_069710633.1\|1040251_1041355_+	serine hydrolase	NA	NA	NA	NA
WP_053566560.1\|1041498_1042368_+	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	2.4e-101	60.1
WP_053566561.1\|1042371_1042953_+	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	2.8e-37	44.0
WP_053566562.1\|1042962_1043991_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	4.5e-70	43.3
WP_053566563.1\|1044054_1044900_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	1.6e-33	36.4
WP_141708335.1\|1044956_1045970_-	polysaccharide biosynthesis C-terminal domain-containing protein	NA	NA	NA	NA
WP_053566565.1\|1045923_1046844_-\|transposase	IS30 family transposase	Q9MBM9	Staphylococcus_prophage	4.6e-50	37.2
WP_053566566.1\|1047100_1048030_+\|transposase	IS30 family transposase	H7BW61	unidentified_phage	5.5e-19	33.0
WP_053566567.1\|1048128_1049130_+	glycosyltransferase family 2 protein	A0A1V0SAH6	Catovirus	3.0e-10	30.4

DBSCAN-SWA_4

1229225 : 1243379

Lactobacillus_phage(90.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_053566590.1\|1229225_1230464_+	hypothetical protein	A0A2P0ZL72	Lactobacillus_phage	1.7e-220	99.5
WP_053566591.1\|1230554_1231229_-	hypothetical protein	A0A2P0ZL68	Lactobacillus_phage	7.6e-111	69.0
WP_003643099.1\|1231414_1232362_-	LysR family transcriptional regulator	A0A2P0ZL89	Lactobacillus_phage	2.7e-178	100.0
WP_003643097.1\|1232704_1233319_+	NAD(P)H-dependent oxidoreductase	A0A2P0ZL77	Lactobacillus_phage	6.3e-112	100.0
WP_022638021.1\|1233321_1235760_+	flavocytochrome c	A0A2P0ZL82	Lactobacillus_phage	0.0e+00	99.6
WP_013355469.1\|1235847_1236408_+	hypothetical protein	A0A2P0ZL75	Lactobacillus_phage	6.5e-100	98.4
WP_013355470.1\|1236478_1236919_-	nucleoside 2-deoxyribosyltransferase	A0A2P0ZL88	Lactobacillus_phage	1.2e-75	97.9
WP_052098033.1\|1237263_1237731_+	hypothetical protein	A0A2P0ZL91	Lactobacillus_phage	6.1e-83	99.4
WP_053566592.1\|1237705_1238680_+	hypothetical protein	A0A2P0ZL95	Lactobacillus_phage	5.0e-31	90.7
WP_047673279.1\|1238783_1238993_+	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
WP_053566593.1\|1241105_1243379_-	HAD-IC family P-type ATPase	M1HX51	Paramecium_bursaria_Chlorella_virus	2.2e-37	23.5

DBSCAN-SWA_5

1488152 : 1532738

Lactobacillus_phage(53.33%)

head,portal,integrase,terminase,capsid,plate,tail

attL 1488070:1488086|attR 1527699:1527715

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1488070:1488086	attL	NA	NA	NA	NA
WP_053566654.1\|1488152_1489373_-\|integrase	site-specific integrase	A0A0P0I3D2	Lactobacillus_phage	4.6e-82	41.3
WP_154568757.1\|1489457_1490135_-	hypothetical protein	NA	NA	NA	NA
WP_053566656.1\|1490103_1490439_-	hypothetical protein	NA	NA	NA	NA
WP_053566657.1\|1490435_1491398_-	AAA family ATPase	E9LUK9	Lactobacillus_phage	1.1e-35	39.0
WP_053566660.1\|1492997_1493429_-	hypothetical protein	O03904	Lactobacillus_phage	1.3e-66	84.3
WP_053566661.1\|1493437_1493836_-	helix-turn-helix transcriptional regulator	O03970	Lactobacillus_phage	3.6e-68	97.0
WP_053566662.1\|1494004_1494271_+	helix-turn-helix transcriptional regulator	O03906	Lactobacillus_phage	1.0e-39	97.7
WP_053566663.1\|1494368_1494683_-	hypothetical protein	NA	NA	NA	NA
WP_053566664.1\|1494720_1494957_-	helix-turn-helix transcriptional regulator	A0A0K2CNE2	Brevibacillus_phage	1.3e-09	36.0
WP_024971535.1\|1495103_1495304_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_053566665.1\|1495529_1495712_+	hypothetical protein	NA	NA	NA	NA
WP_053566666.1\|1495776_1496325_+	hypothetical protein	NA	NA	NA	NA
WP_053566667.1\|1496339_1496603_+	hypothetical protein	NA	NA	NA	NA
WP_053566668.1\|1497135_1497645_+	hypothetical protein	NA	NA	NA	NA
WP_053566669.1\|1497651_1498320_+	AAA family ATPase	E9LUU1	Lactobacillus_phage	4.3e-90	73.7
WP_053566670.1\|1498316_1498862_+	DUF669 domain-containing protein	D2KRE3	Lactobacillus_phage	9.4e-27	45.4
WP_053566671.1\|1498945_1499875_+	DUF4373 domain-containing protein	NA	NA	NA	NA
WP_053566672.1\|1499871_1500159_+	hypothetical protein	NA	NA	NA	NA
WP_053566673.1\|1500155_1500689_+	hypothetical protein	O03915	Lactobacillus_phage	3.2e-40	55.0
WP_053566674.1\|1500681_1501101_+	RusA family crossover junction endodeoxyribonuclease	A8YQM5	Lactobacillus_phage	6.3e-23	40.9
WP_021732636.1\|1501097_1501328_+	hypothetical protein	O03916	Lactobacillus_phage	2.6e-23	63.2
WP_053566675.1\|1501461_1501944_+	methyltransferase domain-containing protein	O03918	Lactobacillus_phage	1.4e-87	93.1
WP_053566676.1\|1502008_1502587_+	hypothetical protein	NA	NA	NA	NA
WP_053566677.1\|1503036_1504800_-	hypothetical protein	NA	NA	NA	NA
WP_053566678.1\|1505182_1505611_+	transcriptional regulator	E9LUP5	Lactobacillus_phage	1.9e-59	78.0
WP_053566679.1\|1506180_1506615_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_053566680.1\|1506815_1507280_+	hypothetical protein	Q597W0	Lactobacillus_virus	8.2e-32	56.4
WP_053566681.1\|1507263_1508550_+\|terminase	PBSX family phage terminase large subunit	A0A2H4IYR5	uncultured_Caudovirales_phage	6.7e-116	50.6
WP_080373206.1\|1508539_1510192_+\|portal	phage portal protein	D2IZF6	Enterococcus_phage	2.0e-67	33.0
WP_053566682.1\|1510191_1511136_+\|capsid	minor capsid protein	NA	NA	NA	NA
WP_053566683.1\|1511244_1511892_+	DUF4355 domain-containing protein	NA	NA	NA	NA
WP_053566684.1\|1511905_1512976_+	hypothetical protein	A0A0S0N2Q7	Pseudomonas_phage	1.2e-33	30.6
WP_053566685.1\|1512990_1513356_+\|head,tail	phage head-tail connector protein	A0A2H4IYR7	uncultured_Caudovirales_phage	6.8e-05	38.2
WP_072536128.1\|1513360_1513684_+	hypothetical protein	NA	NA	NA	NA
WP_053566687.1\|1513673_1514228_+\|tail	phage tail protein	NA	NA	NA	NA
WP_080373207.1\|1514229_1514616_+	DUF3168 domain-containing protein	NA	NA	NA	NA
WP_053566689.1\|1514627_1515215_+\|tail	phage tail protein	NA	NA	NA	NA
WP_053566690.1\|1515232_1515745_+	hypothetical protein	NA	NA	NA	NA
WP_053566691.1\|1515813_1516050_+	hypothetical protein	NA	NA	NA	NA
WP_053566692.1\|1516049_1520054_+	tape measure protein	E9LUR1	Lactobacillus_phage	6.8e-82	44.3
WP_053566693.1\|1520047_1520785_+	hypothetical protein	A0A1S5SA63	Streptococcus_phage	8.2e-42	37.1
WP_053566694.1\|1520784_1522647_+\|tail	phage tail protein	A0A1X9IGI5	Lactococcus_phage	7.9e-49	33.2
WP_053566695.1\|1522651_1523644_+	SGNH/GDSL hydrolase family protein	A0A1J0MFI8	Staphylococcus_phage	4.5e-35	40.6
WP_053566696.1\|1523658_1524273_+\|plate	phage baseplate upper protein	A0A1J0MFQ3	Staphylococcus_phage	6.6e-45	48.3
WP_053566697.1\|1524278_1525019_+	hypothetical protein	Q4ZE15	Staphylococcus_virus	2.7e-08	22.2
WP_053566698.1\|1525019_1525340_+	DUF2977 domain-containing protein	NA	NA	NA	NA
WP_080373208.1\|1525339_1525516_+	XkdX family protein	NA	NA	NA	NA
WP_053566699.1\|1525493_1526648_+	LysM peptidoglycan-binding domain-containing protein	A0A2K9V5A4	Lactobacillus_phage	2.5e-45	69.5
WP_053566700.1\|1526647_1526911_+	hemolysin XhlA family protein	E9LUR9	Lactobacillus_phage	6.5e-26	72.4
WP_053566701.1\|1526924_1527287_+	hypothetical protein	A0A2H4PBB2	Lactobacillus_phage	2.8e-19	69.6
WP_053566702.1\|1527618_1527825_-	hypothetical protein	NA	NA	NA	NA
1527699:1527715	attR	NA	NA	NA	NA
WP_053566703.1\|1528076_1528301_-	hypothetical protein	NA	NA	NA	NA
WP_053566704.1\|1528496_1529102_+	lytic polysaccharide monooxygenase	A0A0K1Y848	Apis_mellifera_filamentous_virus	3.5e-14	28.7
WP_053566705.1\|1529267_1529768_-	N-acetyltransferase	A0A1P8CWJ6	Bacillus_phage	8.3e-22	36.7
WP_003644342.1\|1530565_1530904_-	hypothetical protein	NA	NA	NA	NA
WP_003645107.1\|1531032_1531233_-	hypothetical protein	NA	NA	NA	NA
WP_003640436.1\|1531565_1532738_+	class I SAM-dependent methyltransferase	A0A2K9L4K8	Tupanvirus	2.5e-40	37.8

DBSCAN-SWA_6

2148933 : 2174993

Lactobacillus_phage(90.48%)

terminase,capsid,tail,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_053566799.1\|2148933_2150664_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	2.6e-46	27.6
WP_003641420.1\|2150887_2151280_-	YxeA family protein	NA	NA	NA	NA
WP_003644667.1\|2151502_2152354_+	polysaccharide deacetylase family protein	NA	NA	NA	NA
WP_053566800.1\|2153455_2153836_-\|holin	holin	A0A2H4PBB2	Lactobacillus_phage	1.2e-25	78.2
WP_046783430.1\|2153846_2154110_-	hemolysin XhlA family protein	E9LUR9	Lactobacillus_phage	9.1e-36	95.4
WP_053566801.1\|2154109_2155276_-	LysM peptidoglycan-binding domain-containing protein	O03950	Lactobacillus_phage	3.1e-51	38.7
WP_080373213.1\|2155282_2155429_-	XkdX family protein	NA	NA	NA	NA
WP_053566802.1\|2155425_2155746_-	DUF2977 domain-containing protein	Q7M292	Lactobacillus_phage	1.1e-27	74.4
WP_053566803.1\|2155746_2156532_-	hypothetical protein	O03971	Lactobacillus_phage	1.1e-121	84.7
WP_080373235.1\|2156547_2158293_-	metallophosphoesterase	O03968	Lactobacillus_phage	4.0e-212	67.5
WP_053566804.1\|2158386_2158698_-	hypothetical protein	O03939	Lactobacillus_phage	8.6e-09	56.9
WP_080373214.1\|2158675_2158969_-	hypothetical protein	NA	NA	NA	NA
WP_053566806.1\|2158961_2160080_-\|tail	phage tail protein	O03938	Lactobacillus_phage	1.8e-194	93.0
WP_053566807.1\|2160090_2160900_-\|tail	phage tail family protein	D2KRB8	Lactobacillus_phage	1.3e-51	41.2
WP_053566808.1\|2160899_2165723_-	peptidoglycan DD-metalloendopeptidase family protein	O03937	Lactobacillus_phage	0.0e+00	81.9
WP_053566809.1\|2165726_2166350_-	hypothetical protein	O03936	Lactobacillus_phage	7.3e-108	100.0
WP_053566810.1\|2166355_2166787_-	hypothetical protein	O03935	Lactobacillus_phage	4.3e-75	98.6
WP_015968474.1\|2166836_2167373_-	hypothetical protein	O03972	Lactobacillus_phage	4.6e-95	100.0
WP_053566811.1\|2167406_2167811_-	hypothetical protein	O03934	Lactobacillus_phage	4.8e-68	97.0
WP_053566812.1\|2167810_2168158_-\|capsid	minor capsid protein	O03933	Lactobacillus_phage	9.8e-46	79.7
WP_053566813.1\|2168157_2168511_-\|capsid	capsid protein	O03932	Lactobacillus_phage	8.1e-56	91.5
WP_053566814.1\|2168507_2168936_-	hypothetical protein	NA	NA	NA	NA
WP_053566815.1\|2168956_2169844_-	hypothetical protein	U3PDP8	Lactobacillus_phage	5.2e-91	58.7
WP_053566817.1\|2170540_2171683_-\|capsid	capsid protein	O03929	Lactobacillus_phage	2.1e-169	94.0
WP_053566818.1\|2173213_2174557_-\|terminase	PBSX family phage terminase large subunit	O03927	Lactobacillus_phage	1.6e-261	96.4
WP_053566819.1\|2174537_2174993_-	hypothetical protein	Q597W0	Lactobacillus_virus	2.0e-38	58.1

DBSCAN-SWA_7

2178635 : 2188606

Lactobacillus_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003642805.1\|2178635_2179097_-	transcriptional regulator	D6PSV8	Lactobacillus_phage	1.1e-39	57.0
WP_053566823.1\|2179308_2179689_-	endodeoxyribonuclease	NA	NA	NA	NA
WP_053566824.1\|2179685_2180204_-	hypothetical protein	O03915	Lactobacillus_phage	5.0e-54	67.8
WP_053566825.1\|2180200_2180488_-	hypothetical protein	NA	NA	NA	NA
WP_053566826.1\|2180484_2181393_-	DnaD domain protein	NA	NA	NA	NA
WP_172638398.1\|2181471_2182224_-	PD-(D/E)XK nuclease-like domain-containing protein	A0A0P0IZH9	Lactobacillus_phage	4.5e-72	51.4
WP_003642797.1\|2182255_2183155_-	recombinase RecT	E9LUM3	Lactobacillus_phage	3.2e-64	53.7
WP_072533949.1\|2183151_2183538_-	hypothetical protein	NA	NA	NA	NA
WP_053566829.1\|2183898_2184144_-	hypothetical protein	NA	NA	NA	NA
WP_003642794.1\|2184159_2184672_-	helix-turn-helix transcriptional regulator	D6PST4	Lactobacillus_phage	8.0e-28	43.5
WP_003642793.1\|2184739_2185045_-	DUF771 domain-containing protein	NA	NA	NA	NA
WP_003642792.1\|2185056_2185227_-	hypothetical protein	NA	NA	NA	NA
WP_080373217.1\|2185195_2185477_-	helix-turn-helix transcriptional regulator	A0A2H4JFN1	uncultured_Caudovirales_phage	9.5e-07	42.2
WP_053566830.1\|2185618_2186137_+	helix-turn-helix domain-containing protein	S6C481	Thermus_phage	1.0e-14	34.1
WP_053267721.1\|2186151_2186574_+	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA
WP_053566831.1\|2186674_2187133_+	hypothetical protein	NA	NA	NA	NA
WP_053566832.1\|2187218_2188280_+	type I restriction enzyme HsdR N-terminal domain-containing protein	A0A1S5SAB0	Streptococcus_phage	1.2e-86	45.1
WP_053566833.1\|2188423_2188606_+	hypothetical protein	A0A2P0ZL93	Lactobacillus_phage	8.8e-14	66.7

DBSCAN-SWA_8

2396549 : 2405060

Synechococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003642593.1\|2396549_2397128_-	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	1.9e-22	35.0
WP_003642592.1\|2397120_2398146_-	phosphoribosylformylglycinamidine cyclo-ligase	A0A0E3F760	Synechococcus_phage	8.4e-61	41.7
WP_053566866.1\|2398142_2399597_-	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	2.5e-50	34.0
WP_021356102.1\|2399581_2401801_-	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	3.5e-144	39.1
WP_021356103.1\|2401793_2402474_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_003642588.1\|2402473_2402728_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA
WP_021356104.1\|2402729_2403461_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	M4SM18	Cyanophage	2.1e-37	37.3
WP_024521791.1\|2403463_2404594_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA
WP_003645861.1\|2404577_2405060_-	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	2.3e-16	41.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage