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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP009452 Sphingopyxis sp. 113P3 chromosome, complete genome 1 crisprs WYL,DEDDh,cas3,DinG,csa3 0 0 17 0
NZ_CP009453 Sphingopyxis sp. 113P3 plasmid unnamed, complete sequence 0 crisprs csa3 0 0 1 0

Results visualization

1. NZ_CP009452
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009452_1 3638238-3638373 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 344594 : 395748 42 uncultured_Mediterranean_phage(12.5%) protease,transposase NA
DBSCAN-SWA_2 804948 : 851369 53 Enterococcus_phage(16.67%) transposase NA
DBSCAN-SWA_3 938973 : 985036 68 Brucella_phage(40.91%) transposase,tail,integrase,terminase,capsid attL 956885:956900|attR 989742:989757
DBSCAN-SWA_4 1140663 : 1205819 54 uncultured_Mediterranean_phage(14.29%) integrase,transposase attL 1129326:1129341|attR 1208147:1208162
DBSCAN-SWA_5 1237469 : 1337237 90 Acinetobacter_phage(12.5%) integrase,transposase,tRNA attL 1239668:1239684|attR 1319595:1319611
DBSCAN-SWA_6 1370677 : 1412794 39 Paenibacillus_phage(22.22%) integrase,transposase attL 1370003:1370019|attR 1412518:1412534
DBSCAN-SWA_7 1790772 : 1843008 54 Paenibacillus_phage(25.0%) protease,transposase NA
DBSCAN-SWA_8 1847747 : 1905923 55 Paenibacillus_phage(12.5%) integrase,transposase,tRNA attL 1839706:1839722|attR 1876058:1876074
DBSCAN-SWA_9 2207668 : 2222919 22 Sinorhizobium_phage(63.64%) terminase NA
DBSCAN-SWA_10 2360852 : 2400776 32 Acidithiobacillus_phage(16.67%) transposase,tRNA NA
DBSCAN-SWA_11 2419269 : 2432416 15 Acidithiobacillus_phage(33.33%) transposase NA
DBSCAN-SWA_12 2675482 : 2703163 26 Paenibacillus_phage(100.0%) transposase NA
DBSCAN-SWA_13 2802907 : 2867494 57 Lysinibacillus_phage(22.22%) holin,transposase NA
DBSCAN-SWA_14 3441723 : 3567605 109 Bacillus_phage(10.0%) protease,integrase,transposase,tRNA attL 3482922:3482974|attR 3548724:3548755
DBSCAN-SWA_15 3596032 : 3601947 12 Bordetella_phage(16.67%) NA NA
DBSCAN-SWA_16 3611263 : 3666943 49 Vibrio_phage(17.65%) tail,transposase,terminase NA
DBSCAN-SWA_17 3958279 : 4005735 37 Wolbachia_phage(33.33%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP009453
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 130946 : 191043 49 uncultured_Caudovirales_phage(29.41%) transposase,integrase attL 139540:139556|attR 148550:148566
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage